Prefix(:=) Prefix(owl:=) Prefix(rdf:=) Prefix(xml:=) Prefix(xsd:=) Prefix(rdfs:=) Ontology( Annotation( ) Annotation( ) Annotation( "Alan Ruttenberg") Annotation( "Alexander Diehl") Annotation( "Ann Maglia") Annotation( "Anna Anagnostopoulos") Annotation( "Bgee Project - http://bgee.unil.ch") Annotation( "Bill Bug") Annotation( "Brian K Hall") Annotation( "Carlo Torniai") Annotation( "Catherine Leroy") Annotation( "Ceri Van Slyke") Annotation( "Cynthia Smith") Annotation( "David Hill") Annotation( "David Osumi-Sutherland") Annotation( "Duncan Davidson") Annotation( "Frederic Bastian") Annotation( "Gene Ontology Consortium") Annotation( "George Gkoutos") Annotation( "Hilmar Lapp") Annotation( "James Balhoff") Annotation( "James Malone") Annotation( "Jonathan Bard") Annotation( "Lydie Lane") Annotation( "Marc Robinson-Rechavi") Annotation( "Mark Engelstad - https://orcid.org/0000-0001-5889-4463") Annotation( "Maryann Martone") Annotation( "NIF Project - http://neuinfo.org/") Annotation( "Onard Mejino") Annotation( "PATO Project") Annotation( "Paul Schofield") Annotation( "Paul Sereno") Annotation( "Paula Duek Roggli") Annotation( "Paula Mabee") Annotation( "Phenoscape Project") Annotation( "Rebecca Foulger") Annotation( "Robert Druzinsky") Annotation( "Sarah Whitcher Kansa - https://orcid.org/0000-0001-7920-5321") Annotation( "Shahim Essaid") Annotation( "Suzanna Lewis") Annotation( "Terry Hayamizu") Annotation( "Terry Meehan") Annotation( "Trish Whetzel") Annotation( "Yvonne Bradford") Annotation( "neXtProt project") Annotation( "Alex Dececchi") Annotation( "Anne Niknejad") Annotation( "Aurelie Comte") Annotation( "Chris Mungall - http://orcid.org/0000-0002-6601-2165") Annotation( "David Blackburn") Annotation( "Erik Segerdell") Annotation( "Melissa Haendel") Annotation( "Nicolas Matentzoglu") Annotation( "Nizar Ibrahim") Annotation( "Wasila Dahdul") Annotation( "Uberon is an integrated cross-species anatomy ontology representing a variety of entities classified according to traditional anatomical criteria such as structure, function and developmental lineage. The ontology includes comprehensive relationships to taxon-specific anatomical ontologies, allowing integration of functional, phenotype and expression data.") Annotation( "http://uberon.org"^^xsd:anyURI) Annotation( ) Annotation( ) Annotation( ) Annotation( ) Annotation( ) Annotation( ) Annotation( ) Annotation( ) Annotation( ) Annotation( ) Annotation( ) Annotation( ) Annotation( ) Annotation( ) Annotation( ) Annotation( ) Annotation( ) Annotation( ) Annotation( ) Annotation( ) Annotation( ) Annotation( ) Annotation( ) Annotation( ) Annotation( ) Annotation( ) Annotation( ) Annotation( ) Annotation( ) Annotation( ) Annotation( ) Annotation( "ISBN:0030229073 Invertebrate Zoology, Barnes") Annotation( "ISBN:0073040584 Vertebrates, Kardong") Annotation( "ISBN:0123813611 Comparative Anatomy and Histology: A Mouse and Human Atlas, Treuting and Dintzis") Annotation( "ISBN:0226313379 Fins into Limbs: Evolution, Development, and Transformation, Hall") Annotation( "ISBN:0443065837 Human embryology, Larsen") Annotation( "ISBN:0471888893 Comparative Vertebrate Neuroanatomy: Evolution and Adaptation by Butler and Hodos") Annotation( "ISBN:0683400088 Stedman's Medical Dictionary") Annotation( "ISBN:1588900649 Color Atlas and Textbook of Human Anatomy: Nervous system and sensory organs By Werner Kahle, Michael Frotscher") Annotation( "ISBN:1588903958 Principles and practice of pediatric neurosurgery By A. Leland Albright, P. David Adelson, Ian F. Pollack") Annotation( "ISBN:1607950324 Craniofacial Embryogenetics & Development, 2nd edition, Sperber") Annotation( "ISBN:978-0-12-369548-2 Principles of Developmental Genetics, Sally A Moody") Annotation( "ISBN:9780120749034 The laboratory rat") Annotation( "ISBN:9780397517251 Surgical anatomy of the hand and upper extremity. By James R. Doyle and Michael J. Botte") Annotation( "ISBN:9780674021839 The Tree of Life - Guillaume Lecointre, Herve Le Guyader") Annotation( "ISBN:9780878932504 Developmental Biology") Annotation( "MESH") Annotation( "PMID:11433360 Placental development: lessons from mouse mutants") Annotation( "PMID:16417468 Forgotten and novel aspects in pancreas development, Pieler and Chen") Annotation( "aggregates AAO from 13:04:2012") Annotation( "aggregates TAO from 09:08:2012") Annotation( "aggregates VSAO from 16:07:2012") Annotation( "http://wiki.phenotypercn.org/wg/phenotypercn/index.php?title=Neural_Crest_Workshop"^^xsd:anyURI) Annotation( "http://wiki.phenotypercn.org/wiki/August_2012_Notes"^^xsd:anyURI) Annotation( "https://docs.google.com/document/d/16JZOuH9sh_a8uIXA4cqg0Q1H6MV5yCj3-rhuKsZoV_U/edit"^^xsd:anyURI) Annotation( "https://docs.google.com/document/d/1MnUgispgGfNQoezYzWzzGTnkAnI0gzRnJIwdip6MMtw/edit"^^xsd:anyURI) Annotation( "https://docs.google.com/document/d/1cPWBqrl_Qy7XHEWFqtR_PgQX61yRkgGuLaiDpnEXxkE/edit"^^xsd:anyURI) Annotation( "https://docs.google.com/document/d/1r9kNPpFYGdu0SpJDLyFAVQczBlG0wAZCBMd18gG3Ot8/edit#"^^xsd:anyURI) Annotation( "https://docs.google.com/spreadsheet/ccc?key=0Aj8NJdyb-leqdDM0R3hTVTRHRExDVjRCSkZEbDc5N1E#gid=0"^^xsd:anyURI) Annotation( "Uber-anatomy ontology") Annotation( "http://genomebiology.com/2012/13/1/R5"^^xsd:anyURI) Annotation( "http://www.ncbi.nlm.nih.gov/pubmed/22293552"^^xsd:anyURI) Annotation( ) Annotation( "https://github.com/cmungall/uberon/"^^xsd:anyURI) Annotation( "https://obo.svn.sourceforge.net/svnroot/obo/uberon/"^^xsd:anyURI) Annotation( "https://github.com/obophenotype/uberon/issues/"^^xsd:anyURI) Annotation( "https://lists.sourceforge.net/lists/listinfo/obo-anatomy"^^xsd:anyURI) Annotation( "uberon") Annotation( "1.2") Annotation( "AEO") Annotation( "BILA") Annotation( "BSPO") Annotation( "CARO") Annotation( "EFO") Annotation( "GO") Annotation( "OG") 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NCBITaxon:32443") Annotation( "TGMA part_of NCBITaxon:44484") Annotation( "WBbt part_of NCBITaxon:6237") Annotation( "WBls part_of NCBITaxon:6237") Annotation( "XAO part_of NCBITaxon:8353") Annotation( "ZFA part_of NCBITaxon:7954") Annotation( "ZFS part_of NCBITaxon:7954") Annotation(rdfs:comment "Includes Ontology(OntologyID(OntologyIRI() VersionIRI())) [Axioms: 437 Logical Axioms: 0]") Annotation(rdfs:comment "Includes Ontology(OntologyID(OntologyIRI() VersionIRI())) [Axioms: 20 Logical Axioms: 9]") Annotation(rdfs:comment "Includes Ontology(OntologyID(OntologyIRI() VersionIRI())) [Axioms: 2 Logical Axioms: 2]") Annotation(rdfs:comment "Includes Ontology(OntologyID(OntologyIRI() VersionIRI())) [Axioms: 38 Logical Axioms: 38]") Annotation(owl:versionInfo "2021-11-28") Annotation( "http://uberon.org"^^xsd:anyURI) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) 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Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) 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Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(ObjectProperty()) Declaration(ObjectProperty()) Declaration(ObjectProperty()) Declaration(ObjectProperty()) Declaration(ObjectProperty()) Declaration(ObjectProperty()) Declaration(ObjectProperty()) Declaration(ObjectProperty()) Declaration(ObjectProperty()) Declaration(ObjectProperty()) Declaration(ObjectProperty()) Declaration(ObjectProperty()) Declaration(ObjectProperty()) Declaration(ObjectProperty()) Declaration(ObjectProperty()) Declaration(ObjectProperty()) Declaration(ObjectProperty()) Declaration(ObjectProperty()) Declaration(ObjectProperty()) Declaration(ObjectProperty()) Declaration(ObjectProperty()) Declaration(ObjectProperty()) Declaration(ObjectProperty()) Declaration(ObjectProperty()) Declaration(ObjectProperty()) Declaration(ObjectProperty()) Declaration(ObjectProperty()) Declaration(ObjectProperty()) Declaration(ObjectProperty()) Declaration(ObjectProperty()) Declaration(ObjectProperty()) Declaration(ObjectProperty()) Declaration(ObjectProperty()) Declaration(ObjectProperty()) Declaration(ObjectProperty()) Declaration(ObjectProperty()) Declaration(ObjectProperty()) Declaration(ObjectProperty()) Declaration(ObjectProperty()) Declaration(ObjectProperty()) Declaration(ObjectProperty()) Declaration(ObjectProperty()) Declaration(ObjectProperty()) Declaration(ObjectProperty()) Declaration(ObjectProperty()) Declaration(ObjectProperty()) Declaration(ObjectProperty()) Declaration(ObjectProperty()) Declaration(ObjectProperty()) Declaration(ObjectProperty()) Declaration(ObjectProperty()) Declaration(ObjectProperty()) Declaration(ObjectProperty()) Declaration(ObjectProperty()) Declaration(ObjectProperty()) Declaration(ObjectProperty()) Declaration(ObjectProperty()) Declaration(ObjectProperty()) Declaration(ObjectProperty()) Declaration(ObjectProperty()) Declaration(ObjectProperty()) Declaration(ObjectProperty()) Declaration(ObjectProperty()) Declaration(ObjectProperty()) Declaration(ObjectProperty()) Declaration(ObjectProperty()) Declaration(ObjectProperty()) Declaration(ObjectProperty()) Declaration(ObjectProperty()) Declaration(ObjectProperty()) Declaration(ObjectProperty()) Declaration(ObjectProperty()) Declaration(ObjectProperty()) Declaration(ObjectProperty()) Declaration(ObjectProperty()) Declaration(ObjectProperty()) Declaration(ObjectProperty()) Declaration(ObjectProperty()) Declaration(ObjectProperty()) Declaration(ObjectProperty()) Declaration(ObjectProperty()) Declaration(ObjectProperty()) Declaration(ObjectProperty()) Declaration(ObjectProperty()) Declaration(ObjectProperty()) Declaration(ObjectProperty()) Declaration(ObjectProperty()) Declaration(ObjectProperty()) Declaration(ObjectProperty()) Declaration(ObjectProperty()) Declaration(ObjectProperty()) Declaration(ObjectProperty()) Declaration(ObjectProperty()) Declaration(ObjectProperty()) Declaration(ObjectProperty()) Declaration(ObjectProperty()) Declaration(ObjectProperty()) Declaration(ObjectProperty()) Declaration(ObjectProperty()) Declaration(ObjectProperty()) Declaration(ObjectProperty()) Declaration(ObjectProperty()) Declaration(ObjectProperty()) Declaration(ObjectProperty()) Declaration(ObjectProperty()) Declaration(ObjectProperty()) Declaration(ObjectProperty()) Declaration(ObjectProperty()) Declaration(ObjectProperty()) Declaration(ObjectProperty()) Declaration(ObjectProperty()) Declaration(ObjectProperty()) Declaration(ObjectProperty()) Declaration(ObjectProperty()) Declaration(ObjectProperty()) Declaration(ObjectProperty()) Declaration(ObjectProperty()) Declaration(ObjectProperty()) Declaration(ObjectProperty()) Declaration(ObjectProperty()) Declaration(ObjectProperty()) Declaration(ObjectProperty()) Declaration(ObjectProperty()) Declaration(ObjectProperty()) Declaration(ObjectProperty()) Declaration(ObjectProperty()) Declaration(ObjectProperty()) Declaration(ObjectProperty()) Declaration(ObjectProperty()) Declaration(ObjectProperty()) Declaration(ObjectProperty()) Declaration(ObjectProperty()) Declaration(ObjectProperty()) Declaration(ObjectProperty()) Declaration(ObjectProperty()) Declaration(ObjectProperty()) Declaration(ObjectProperty()) Declaration(ObjectProperty()) Declaration(ObjectProperty()) Declaration(ObjectProperty()) Declaration(ObjectProperty()) Declaration(ObjectProperty()) Declaration(ObjectProperty()) Declaration(ObjectProperty()) Declaration(ObjectProperty()) Declaration(ObjectProperty()) Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) Declaration(AnnotationProperty(rdfs:comment)) Declaration(AnnotationProperty(rdfs:label)) Declaration(AnnotationProperty(rdfs:seeAlso)) Declaration(AnnotationProperty(owl:deprecated)) Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) ############################ # Annotation Properties ############################ # Annotation Property: (example of usage) AnnotationAssertion( "IAO:0000112") AnnotationAssertion( "uberon") AnnotationAssertion( "example_of_usage") AnnotationAssertion( "true"^^xsd:boolean) AnnotationAssertion( "example_of_usage") AnnotationAssertion(rdfs:isDefinedBy ) AnnotationAssertion(rdfs:label "example of usage") AnnotationAssertion(rdfs:label "example of usage"@en) # Annotation Property: (definition) AnnotationAssertion(rdfs:isDefinedBy ) AnnotationAssertion(rdfs:label "definition") AnnotationAssertion(rdfs:label "definition"@en) # Annotation Property: (editor note) AnnotationAssertion( ) AnnotationAssertion( "IAO:0000116") AnnotationAssertion( "uberon") AnnotationAssertion( "editor_note") AnnotationAssertion( "true"^^xsd:boolean) AnnotationAssertion( "editor_note") AnnotationAssertion(rdfs:isDefinedBy ) AnnotationAssertion(rdfs:label "editor note") AnnotationAssertion(rdfs:label "editor note"@en) # Annotation Property: (curator notes) AnnotationAssertion( "IAO:0000232") AnnotationAssertion( "uberon") AnnotationAssertion( "curator_notes") AnnotationAssertion( "true"^^xsd:boolean) AnnotationAssertion( "curator_notes") AnnotationAssertion(rdfs:isDefinedBy ) AnnotationAssertion(rdfs:label "curator note"@en) AnnotationAssertion(rdfs:label "curator notes") # Annotation Property: (expand expression to) AnnotationAssertion(rdfs:label "expand expression to") # Annotation Property: (expand assertion to) AnnotationAssertion(rdfs:label "expand assertion to") # Annotation Property: (term replaced by) AnnotationAssertion(rdfs:label "term replaced by") # Annotation Property: (never in taxon) AnnotationAssertion( "tooth SubClassOf 'never in taxon' value 'Aves'") AnnotationAssertion(Annotation( ) "S never_in_taxon T iff: S SubClassOf in_taxon only not T.") AnnotationAssertion( "x never in taxon T if and only if T is a class, and x does not instantiate the class expression \"in taxon some T\". Note that this is a shortcut relation, and should be used as a hasValue restriction in OWL.") AnnotationAssertion( "Chris Mungall") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "?X DisjointWith RO_0002162 some ?Y ") AnnotationAssertion( "Class: EquivalentTo: ?X and (RO_0002162 some ?Y)") AnnotationAssertion( "RO:0002161") AnnotationAssertion( "uberon") AnnotationAssertion( "never_in_taxon") AnnotationAssertion( "true"^^xsd:boolean) AnnotationAssertion( "true"^^xsd:boolean) AnnotationAssertion( "never_in_taxon") AnnotationAssertion(rdfs:label "never in taxon") AnnotationAssertion(rdfs:label "never_in_taxon") AnnotationAssertion(rdfs:seeAlso ) # Annotation Property: (mutually_spatially_disjoint_with) AnnotationAssertion( "Class: EquivalentTo: (BFO_0000050 some ?X) and (BFO_0000050 some ?Y)") AnnotationAssertion( "RO:0002171") AnnotationAssertion( "uberon") AnnotationAssertion( "mutually_spatially_disjoint_with") AnnotationAssertion( "true"^^xsd:boolean) AnnotationAssertion( "true"^^xsd:boolean) AnnotationAssertion( "mutually_spatially_disjoint_with") AnnotationAssertion(rdfs:label "mutually_spatially_disjoint_with") # Annotation Property: (ambiguous_for_taxon) AnnotationAssertion(Annotation( "PHENOSCPAE:asilomar_mtg") "S ambiguous_for_taxon T if the class S does not have a clear referent in taxon T. An example would be the class 'manual digit 1', which encompasses a homology hypotheses that is accepted for some species (e.g. human and mouse), but does not have a clear referent in Aves - the referent is dependent on the hypothesis embraced, and also on the ontogenetic stage.") AnnotationAssertion( "RO:0002173") AnnotationAssertion( "uberon") AnnotationAssertion( "ambiguous_for_taxon") AnnotationAssertion( "true"^^xsd:boolean) AnnotationAssertion( "true"^^xsd:boolean) AnnotationAssertion( "ambiguous_for_taxon") AnnotationAssertion(rdfs:label "ambiguous_for_taxon") # Annotation Property: (dubious_for_taxon) AnnotationAssertion(Annotation( ) "S dubious_for_taxon T if it is probably the case that no instances of S can be found in any instance of T.") AnnotationAssertion( "RO:0002174") AnnotationAssertion( "uberon") AnnotationAssertion( "dubious_for_taxon") AnnotationAssertion( "true"^^xsd:boolean) AnnotationAssertion( "true"^^xsd:boolean) AnnotationAssertion( "dubious_for_taxon") AnnotationAssertion(rdfs:comment "this relation lacks a strong logical interpretation, but can be used in place of never_in_taxon where it is desirable to state that the definition of the class is too strict for the taxon under consideration, but placing a never_in_taxon link would result in a chain of inconsistencies that will take time to resolve. Example: metencephalon in teleost") AnnotationAssertion(rdfs:label "dubious_for_taxon") # Annotation Property: (present in taxon) AnnotationAssertion( "S present_in_taxon T if some instance of T has some S. This does not means that all instances of T have an S - it may only be certain life stages or sexes that have S") AnnotationAssertion(Annotation( ) "S present_in_taxon T if some instance of T has some S. This does not means that all instances of T have an S - it may only be certain life stages or sexes that have S.") AnnotationAssertion( "https://orcid.org/0000-0002-6601-2165") AnnotationAssertion( ) AnnotationAssertion( "RO:0002175") AnnotationAssertion( "applicable for taxon") AnnotationAssertion( "uberon") AnnotationAssertion( "present_in_taxon") AnnotationAssertion( "true"^^xsd:boolean) AnnotationAssertion( "true"^^xsd:boolean) AnnotationAssertion( "present_in_taxon") AnnotationAssertion(rdfs:label "present in taxon") AnnotationAssertion(rdfs:label "present_in_taxon") AnnotationAssertion(rdfs:seeAlso ) # Annotation Property: (has_no_connections_with) AnnotationAssertion(Annotation( ) "A is has_no_connections_with B if there are no parts of A or B that have a connection with the other.") AnnotationAssertion( "Class: EquivalentTo: (BFO_0000050 some ?X) and (RO_0002170 some (BFO_0000050 some ?Y))") AnnotationAssertion( "RO:0002475") AnnotationAssertion( "uberon") AnnotationAssertion( "has_no_connections_with") AnnotationAssertion( "true"^^xsd:boolean) AnnotationAssertion( "true"^^xsd:boolean) AnnotationAssertion( "has_no_connections_with") AnnotationAssertion(rdfs:label "has_no_connections_with") # Annotation Property: (external_definition) AnnotationAssertion(Annotation( ) "An alternate textual definition for a class taken unmodified from an external source. This definition may have been used to derive a generalized definition for the new class.") AnnotationAssertion( "UBPROP:0000001") AnnotationAssertion( "uberon") AnnotationAssertion( "external_definition") AnnotationAssertion( "true"^^xsd:boolean) AnnotationAssertion( "external_definition") AnnotationAssertion(rdfs:comment "This annotation property may be replaced with an annotation property from an external ontology such as IAO") AnnotationAssertion(rdfs:label "external_definition") # Annotation Property: (axiom_lost_from_external_ontology) AnnotationAssertion(Annotation( ) "A textual description of an axiom loss in this ontology compared to an external ontology.") AnnotationAssertion( "UBPROP:0000002") AnnotationAssertion( "uberon") AnnotationAssertion( "axiom_lost_from_external_ontology") AnnotationAssertion( "true"^^xsd:boolean) AnnotationAssertion( "axiom_lost_from_external_ontology") AnnotationAssertion(rdfs:comment "This annotation property may be replaced with an annotation property from an external ontology such as IAO") AnnotationAssertion(rdfs:label "axiom_lost_from_external_ontology") # Annotation Property: (homology_notes) AnnotationAssertion(Annotation( ) "Notes on the homology status of this class.") AnnotationAssertion( "UBPROP:0000003") AnnotationAssertion( "uberon") AnnotationAssertion( "homology_notes") AnnotationAssertion( "true"^^xsd:boolean) AnnotationAssertion( "homology_notes") AnnotationAssertion(rdfs:comment "This annotation property may be replaced with an annotation property from an external ontology such as IAO") AnnotationAssertion(rdfs:label "homology_notes") # Annotation Property: (provenance_notes) AnnotationAssertion( "UBPROP:0000004") AnnotationAssertion( "uberon") AnnotationAssertion( "provenance_notes") AnnotationAssertion( "true"^^xsd:boolean) AnnotationAssertion( "provenance_notes") AnnotationAssertion(rdfs:label "provenance_notes") # Annotation Property: (external_comment) AnnotationAssertion(Annotation( ) "An alternate comment for a class taken unmodified from an external source. Note that obo format only allows a single comment for a class, and does not provide a structured means of adding provenance info.") AnnotationAssertion( "UBPROP:0000005") AnnotationAssertion( "uberon") AnnotationAssertion( "external_comment") AnnotationAssertion( "true"^^xsd:boolean) AnnotationAssertion( "external_comment") AnnotationAssertion(rdfs:comment "This annotation property may be replaced with an annotation property from an external ontology such as IAO") AnnotationAssertion(rdfs:label "external_comment") # Annotation Property: (implements_design_pattern) AnnotationAssertion( "UBPROP:0000006") AnnotationAssertion( "uberon") AnnotationAssertion( "implements_design_pattern") AnnotationAssertion( "true"^^xsd:boolean) AnnotationAssertion( "implements_design_pattern") AnnotationAssertion(rdfs:label "implements_design_pattern") # Annotation Property: (has_relational_adjective) AnnotationAssertion( "Used to connect a class to an adjectival form of its label. For example, a class with label 'intestine' may have a relational adjective 'intestinal'.") AnnotationAssertion( "UBPROP:0000007") AnnotationAssertion( "uberon") AnnotationAssertion( "has_relational_adjective") AnnotationAssertion( "true"^^xsd:boolean) AnnotationAssertion( "has_relational_adjective") AnnotationAssertion(rdfs:label "has_relational_adjective") # Annotation Property: (taxon_notes) AnnotationAssertion(Annotation( ) "Notes on the how instances of this class vary across species.") AnnotationAssertion( "UBPROP:0000008") AnnotationAssertion( "uberon") AnnotationAssertion( "taxon_notes") AnnotationAssertion( "true"^^xsd:boolean) AnnotationAssertion( "taxon_notes") AnnotationAssertion(rdfs:label "taxon_notes") # Annotation Property: (function_notes) AnnotationAssertion(Annotation( ) "Notes on the evolved function of instances of this class.") AnnotationAssertion( "This annotation property may be replaced with an annotation property from an external ontology such as IAO") AnnotationAssertion( "UBPROP:0000009") AnnotationAssertion( "uberon") AnnotationAssertion( "function_notes") AnnotationAssertion( "true"^^xsd:boolean) AnnotationAssertion( "function_notes") AnnotationAssertion(rdfs:label "function_notes") # Annotation Property: (structure_notes) AnnotationAssertion(Annotation( ) "Notes on the structure, composition or histology of instances of this class.") AnnotationAssertion( "This annotation property may be replaced with an annotation property from an external ontology such as IAO") AnnotationAssertion( "UBPROP:0000010") AnnotationAssertion( "uberon") AnnotationAssertion( "structure_notes") AnnotationAssertion( "true"^^xsd:boolean) AnnotationAssertion( "structure_notes") AnnotationAssertion(rdfs:label "structure_notes") # Annotation Property: (development_notes) AnnotationAssertion(Annotation( ) "Notes on the ontogenic development of instances of this class.") AnnotationAssertion( "This annotation property may be replaced with an annotation property from an external ontology such as IAO") AnnotationAssertion( "UBPROP:0000011") AnnotationAssertion( "uberon") AnnotationAssertion( "development_notes") AnnotationAssertion( "true"^^xsd:boolean) AnnotationAssertion( "development_notes") AnnotationAssertion(rdfs:label "development_notes") # Annotation Property: (external_ontology_notes) AnnotationAssertion(Annotation( ) "Notes on how similar or equivalent classes are represented in other ontologies.") AnnotationAssertion( "This annotation property may be replaced with an annotation property from an external ontology such as IAO") AnnotationAssertion( "UBPROP:0000012") AnnotationAssertion( "uberon") AnnotationAssertion( "external_ontology_notes") AnnotationAssertion( "true"^^xsd:boolean) AnnotationAssertion( "external_ontology_notes") AnnotationAssertion(rdfs:label "external_ontology_notes") # Annotation Property: (terminology_notes) AnnotationAssertion(Annotation( ) "Notes on how lexical conventions regarding this class, in particular any issues that may arise due to homonyny or synonymy.") AnnotationAssertion( "This annotation property may be replaced with an annotation property from an external ontology such as IAO") AnnotationAssertion( "UBPROP:0000013") AnnotationAssertion( "uberon") AnnotationAssertion( "terminology_notes") AnnotationAssertion( "true"^^xsd:boolean) AnnotationAssertion( "terminology_notes") AnnotationAssertion(rdfs:label "terminology_notes") # Annotation Property: (actions_notes) AnnotationAssertion(Annotation( ) "Notes on how instances of this class functon biomechanically.") AnnotationAssertion( "This annotation property may be replaced with an annotation property from an external ontology such as IAO") AnnotationAssertion( "UBPROP:0000014") AnnotationAssertion( "uberon") AnnotationAssertion( "action_notes") AnnotationAssertion( "true"^^xsd:boolean) AnnotationAssertion( "action_notes") AnnotationAssertion(rdfs:label "actions_notes") # Annotation Property: (location_notes) AnnotationAssertion(Annotation( ) "Notes on the location, position or part-parents of instances of this class.") AnnotationAssertion( "This annotation property may be replaced with an annotation property from an external ontology such as IAO") AnnotationAssertion( "UBPROP:0000015") AnnotationAssertion( "uberon") AnnotationAssertion( "location_notes") AnnotationAssertion( "true"^^xsd:boolean) AnnotationAssertion( "location_notes") AnnotationAssertion(rdfs:label "location_notes") # Annotation Property: (is count of) AnnotationAssertion( "UBPROP:0000100") AnnotationAssertion( "uberon") AnnotationAssertion( "is_count_of") AnnotationAssertion( "true"^^xsd:boolean) AnnotationAssertion( "is_count_of") AnnotationAssertion(rdfs:label "is count of") # Annotation Property: (preceding element is) AnnotationAssertion(Annotation( ) "A property used in conjunction with repeated_element_number to indicate an axis and directionality along that axis. If P preceding_element_is R, and P is_count_of S, and X P N, and X' P N+1, then it follows that every X R some X', and the class expression [S and R some X' and inv(R) some X] is empty (i.e. X is followed by X', with no intermediates).") AnnotationAssertion( "UBPROP:0000101") AnnotationAssertion( "uberon") AnnotationAssertion( "preceding_element_is") AnnotationAssertion( "true"^^xsd:boolean) AnnotationAssertion( "preceding_element_is") AnnotationAssertion(rdfs:label "preceding element is") # Annotation Property: (repeated element number) AnnotationAssertion(Annotation( ) "A property used to indicate the position of an element where that element is of a type that is serially repeated linearly along some axis for which a total ordering exists. The ordering may represent an ancestral condition.") AnnotationAssertion( "UBPROP:0000102") AnnotationAssertion( "uberon") AnnotationAssertion( "repeated_element_number") AnnotationAssertion( "true"^^xsd:boolean) AnnotationAssertion( "repeated_element_number") AnnotationAssertion(rdfs:comment "The range is currently non-negative integer") AnnotationAssertion(rdfs:label "repeated element number") # Annotation Property: (pharyngeal arch number) AnnotationAssertion(Annotation( ) "x pharyngeal_arch_number N if and only if (i) x is a pharyngeal arch, and (ii) x is ancestrally pharyngeal arch number N in a series of pharyngeal arches repeated along a antero-posterior axis, with arch_number 1 being the mandibular arch.") AnnotationAssertion( "gill arch N = PA N-2. the term branchial_arch is ambiguous.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "UBPROP:0000103") AnnotationAssertion( "uberon") AnnotationAssertion( "pharyngeal_arch_number") AnnotationAssertion( "true"^^xsd:boolean) AnnotationAssertion( "pharyngeal_arch_number") AnnotationAssertion(rdfs:label "pharyngeal arch number") # Annotation Property: (ray number) AnnotationAssertion(Annotation( ) "x ray_number N if and only if (i) x is a ray, and (ii) x is ancestrally associated with ray number N in a series of phalanges repeated along a radio-ulnar or equivalent axis, with ray_number 1 being the anteriormost ray.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "UBPROP:0000104") AnnotationAssertion( "uberon") AnnotationAssertion( "ray_number") AnnotationAssertion( "true"^^xsd:boolean) AnnotationAssertion( "ray_number") AnnotationAssertion(rdfs:comment "The correct terminology is yet to be established; in tetrapods 'ray' might mean the mereological sum of the phalanges of a manual digit plus a metatarsal bone (or equivalent for hindlimb)") AnnotationAssertion(rdfs:label "ray number") # Annotation Property: (phalanx number) AnnotationAssertion(Annotation( ) Annotation( ) "x phalanx_number N if and only if (i) x is a phalanx, and (ii) x is phalanx number N in a series of phalanges repeated along an prixomo-distal axis, with phalanx_number 1 being the proximalmost phalanx. Note that in humans, the distalmost phalanx has phlanax_number 3, except in ray_number 1, where the distalmost has phalanx_number 2.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "UBPROP:0000105") AnnotationAssertion( "uberon") AnnotationAssertion( "phalanx_number") AnnotationAssertion( "true"^^xsd:boolean) AnnotationAssertion( "phalanx_number") AnnotationAssertion(rdfs:comment "Most land mammals including humans have a 2-3-3-3-3 formula in both the hands (or paws) and feet. Primitive reptiles typically had the formula 2-3-4-4-5, and this pattern, with some modification, remained in many later reptiles and in the mammal-like reptiles. The phalangeal formula in the flippers of cetaceans (marine mammals) is 2-12-8-1") AnnotationAssertion(rdfs:label "phalanx number") # Annotation Property: (rib number) AnnotationAssertion(Annotation( ) "x rib_number N if and only if (i) x is a rib, and (ii) x is rib number N in a series of ribs repeated along an anterior-posterior axis, with rib_number 1 being the anteriormost rib. Note that this property counts ribs, *not* the adjoining vertebrae.") AnnotationAssertion( "In the early tetrapods, every vertebra bore a pair of ribs, although those on the thoracic vertebrae are typically the longest. In most subsequent forms, many of these early ribs have been lost, and in living amphibians and reptiles, there is great variation in rib structure and number. For example, turtles have only eight pairs of ribs, which are developed into a bony or cartilagenous carapace and plastron, while snakes have numerous ribs running along the full length of their trunk. Frogs typically have no ribs, aside from a sacral pair, which form part of the pelvis. Mammals usually also only have distinct ribs on the thoracic vertebra, although fixed cervical ribs are also present in monotremes. In marsupials and placental mammals, the cervical and lumbar ribs are found only as tiny remnants fused to the vertebrae, where they are referred to as transverse processes. In general, the structure and number of the true ribs in humans is similar to that in other mammals. Unlike reptiles, caudal ribs are never found in mammals.") AnnotationAssertion(Annotation( "TAO") "Note that in TAO, ribs are numbered by *vertebrae*") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "UBPROP:0000106") AnnotationAssertion( "uberon") AnnotationAssertion( "rib_number") AnnotationAssertion( "true"^^xsd:boolean) AnnotationAssertion( "rib_number") AnnotationAssertion(rdfs:label "rib number") # Annotation Property: (vertebra number) AnnotationAssertion(Annotation( ) "x vertebra_number N if and only if (i) x is a vertebra, and (ii) x is vertebra number N in a series of vertebras repeated along an anterior-posterior axis, with vertebra_number 1 being the anteriormost vertebra (also known as the atlas).") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "UBPROP:0000107") AnnotationAssertion( "uberon") AnnotationAssertion( "vertebra_number") AnnotationAssertion( "true"^^xsd:boolean) AnnotationAssertion( "vertebra_number") AnnotationAssertion(rdfs:label "vertebra number") # Annotation Property: (somite number) AnnotationAssertion(Annotation( ) Annotation( ) "x somite_number N if and only if (i) x is a somite, and (ii) x is somite number N in a series of somites repeated along an anterior-posterior axis, with somite_number 1 being the anteriormost somite.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "UBPROP:0000108") AnnotationAssertion( "uberon") AnnotationAssertion( "somite_number") AnnotationAssertion( "true"^^xsd:boolean) AnnotationAssertion( "somite_number") AnnotationAssertion(rdfs:label "somite number") # Annotation Property: (paired_appendage number) AnnotationAssertion(Annotation( ) "x paired_appendage_number N if and only if (i) x is a paired_appendage, and (ii) x is paired_appendage number N in a series of paired_appendages repeated along an anterior-posterior axis, with paired_appendage_number 1 being the anteriormost paired_appendage. In vertebrates, this is the pectoral appendage.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "UBPROP:0000109") AnnotationAssertion( "uberon") AnnotationAssertion( "paired_appendage_number") AnnotationAssertion( "true"^^xsd:boolean) AnnotationAssertion( "paired_appendage_number") AnnotationAssertion(rdfs:label "paired_appendage number") # Annotation Property: (appendage segment number) AnnotationAssertion(Annotation( ) "x appendage_segment_number N if and only if (i) x is a appendage_segment, and (ii) x is appendage_segment number N in a series of appendage_segments repeated along an proximo-distal axis, with appendage_segment_number 1 being the proximalmost appendage_segment (in tetrapods this would be the stylopod, as we do not classify girdles as appendage segments).") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "UBPROP:0000110") AnnotationAssertion( "uberon") AnnotationAssertion( "appendage_segment_number") AnnotationAssertion( "true"^^xsd:boolean) AnnotationAssertion( "appendage_segment_number") AnnotationAssertion(rdfs:comment "Examples: in dropsphila coxa=1, trochanter=2, femur=3, tibia=4, tarsal segments 1-5=5-9, pretarsus=10") AnnotationAssertion(rdfs:label "appendage segment number") # Annotation Property: (rhombomere number) AnnotationAssertion(Annotation( ) "x rhombomere_number N if and only if (i) x is a rhombomere, and (ii) x is rhombomere number N in a series of rhombomeres repeated along an anterior-posterior axis, with rhombomere_number 1 being the anteriormost rhombomere.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "UBPROP:0000111") AnnotationAssertion( "uberon") AnnotationAssertion( "rhombomere_number") AnnotationAssertion( "true"^^xsd:boolean) AnnotationAssertion( "rhombomere_number") AnnotationAssertion(rdfs:label "rhombomere number") # Annotation Property: (tooth number) AnnotationAssertion( "x tooth_number N if and only if (i) x is a tooth, and (ii) x is ancestrally tooth number N in a series of teeth repeated along an anterior-posterior axis, typically on the lateral side of a structure such as a jaw, with tooth_number 1 being the anteriormost. Note that this count refers to the total number of teeth starting from the first, regardless of the type of tooth. If sub-systems are required for numbering within a series of teeth of the same type, consider a subproperty. For example, in a human, maxillary canine = tooth 3 of upper jaw = canine_tooth 1 of upper jaw.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "UBPROP:0000112") AnnotationAssertion( "uberon") AnnotationAssertion( "tooth_number") AnnotationAssertion( "true"^^xsd:boolean) AnnotationAssertion( "tooth_number") AnnotationAssertion(rdfs:label "tooth number") AnnotationAssertion(rdfs:seeAlso ) # Annotation Property: (dental formula) AnnotationAssertion(Annotation( ) "Syntax: upper/lower = I.C.P.M / I.C.P.M. When used with generic tooth class applies to both deciduous and primary. Should also be used with a taxon property.") AnnotationAssertion( "UBPROP:0000113") AnnotationAssertion( "uberon") AnnotationAssertion( "dental_formula") AnnotationAssertion( "true"^^xsd:boolean) AnnotationAssertion( "dental_formula") AnnotationAssertion(rdfs:label "dental formula") # Annotation Property: (source atlas) AnnotationAssertion( "UBPROP:0000201") AnnotationAssertion( "uberon") AnnotationAssertion( "source_atlas") AnnotationAssertion( "true"^^xsd:boolean) AnnotationAssertion( "source_atlas") AnnotationAssertion(rdfs:label "source atlas") # Annotation Property: (fma_set_term) AnnotationAssertion(Annotation( "FMA"^^xsd:string) "FMA has terms like 'set of X'. In general we do not include set-of terms in uberon, but provide a mapping between the singular form and the FMA set term") AnnotationAssertion( "UBPROP:0000202") AnnotationAssertion( "uberon") AnnotationAssertion( "fma_set_term") AnnotationAssertion( "true"^^xsd:boolean) AnnotationAssertion( "fma_set_term") AnnotationAssertion(rdfs:label "fma_set_term") # Annotation Property: () SubAnnotationPropertyOf( ) # Annotation Property: () SubAnnotationPropertyOf( ) # Annotation Property: () SubAnnotationPropertyOf( ) # Annotation Property: () SubAnnotationPropertyOf( ) # Annotation Property: () SubAnnotationPropertyOf( ) # Annotation Property: () SubAnnotationPropertyOf( ) # Annotation Property: (abbreviation) AnnotationAssertion(rdfs:label "abbreviation") SubAnnotationPropertyOf( ) # Annotation Property: (brain name abbreviations (drosophila)) AnnotationAssertion(rdfs:label "brain name abbreviations (drosophila)") SubAnnotationPropertyOf( ) # Annotation Property: (preferred term in the context of comparative anatomy) AnnotationAssertion(rdfs:label "preferred term in the context of comparative anatomy") SubAnnotationPropertyOf( ) # Annotation Property: (A historic synonym, no longer encouraged) AnnotationAssertion(rdfs:label "A historic synonym, no longer encouraged") SubAnnotationPropertyOf( ) # Annotation Property: (developmental term) AnnotationAssertion(rdfs:label "developmental term") SubAnnotationPropertyOf( ) # Annotation Property: (dubious or contested synonym) AnnotationAssertion(rdfs:label "dubious or contested synonym") SubAnnotationPropertyOf( ) # Annotation Property: (a synonym made on the basis of a possibly homologous structure in another species) AnnotationAssertion(rdfs:label "a synonym made on the basis of a possibly homologous structure in another species") SubAnnotationPropertyOf( ) # Annotation Property: (preferred term when talking about an instance of this class in Homo sapiens) AnnotationAssertion(rdfs:label "preferred term when talking about an instance of this class in Homo sapiens") SubAnnotationPropertyOf( ) # Annotation Property: (indicates that a synonym is used in an inconsistent or confusing way, typically between species) AnnotationAssertion(rdfs:label "indicates that a synonym is used in an inconsistent or confusing way, typically between species") SubAnnotationPropertyOf( ) # Annotation Property: (latin term) AnnotationAssertion(rdfs:label "latin term") SubAnnotationPropertyOf( ) # Annotation Property: (a mis-spelling that is in common use and thus recorded) AnnotationAssertion(rdfs:label "a mis-spelling that is in common use and thus recorded") SubAnnotationPropertyOf( ) # Annotation Property: (synonym that is inappropriate for amniotes) AnnotationAssertion(rdfs:label "synonym that is inappropriate for amniotes") SubAnnotationPropertyOf( ) # Annotation Property: (synonym that is inappropriate for mammals) AnnotationAssertion(rdfs:label "synonym that is inappropriate for mammals") SubAnnotationPropertyOf( ) # Annotation Property: (expert consultation and attribution required) AnnotationAssertion(rdfs:label "expert consultation and attribution required") SubAnnotationPropertyOf( ) # Annotation Property: (plural term) AnnotationAssertion(rdfs:label "plural term") SubAnnotationPropertyOf( ) # Annotation Property: (taxonomic disambiguation) AnnotationAssertion(rdfs:label "taxonomic disambiguation") SubAnnotationPropertyOf( ) # Annotation Property: (a systematic synonym used as the base name for design patterns) AnnotationAssertion(rdfs:label "a systematic synonym used as the base name for design patterns") SubAnnotationPropertyOf( ) # Annotation Property: () AnnotationAssertion(rdfs:comment "Classes tagged with this subset property were added upon request from the Human Cell Atlas (HCA).") SubAnnotationPropertyOf( ) # Annotation Property: () AnnotationAssertion(rdfs:comment "CUMBO") SubAnnotationPropertyOf( ) # Annotation Property: () AnnotationAssertion(rdfs:comment "cyclostome structures") SubAnnotationPropertyOf( ) # Annotation Property: () AnnotationAssertion(rdfs:comment "brain region defined by cyto-architecture") SubAnnotationPropertyOf( ) # Annotation Property: () AnnotationAssertion(rdfs:comment "classes that are defined by relative position counting from first in a series of elements along an axis in an individual organism rather than by strict homology") SubAnnotationPropertyOf( ) # Annotation Property: () AnnotationAssertion(rdfs:comment "developmental_classification") SubAnnotationPropertyOf( ) # Annotation Property: () AnnotationAssertion(rdfs:comment "Indicates that subclasses in AOs may be inappropriately linked") SubAnnotationPropertyOf( ) # Annotation Property: () AnnotationAssertion(rdfs:comment "A class that represents an early developmental structure, like a blastocyst. This part of the ontology is undergoing review to remove inappropriate grouping classes.") SubAnnotationPropertyOf( ) # Annotation Property: () AnnotationAssertion(rdfs:comment "EFO slim") SubAnnotationPropertyOf( ) # Annotation Property: () AnnotationAssertion(rdfs:comment "derived from the union of EHDAA2 and EMAPA - still to be checked") SubAnnotationPropertyOf( ) # Annotation Property: () AnnotationAssertion(rdfs:comment "subset of classes that have logical defs text defs and synonyms aligned with FEED") SubAnnotationPropertyOf( ) # Annotation Property: () AnnotationAssertion(rdfs:comment "functional_classification") SubAnnotationPropertyOf( ) # Annotation Property: () AnnotationAssertion(rdfs:comment "Subset consisting of classes creating for grouping purposes") SubAnnotationPropertyOf( ) # Annotation Property: (homologous_in) AnnotationAssertion( "uberon") AnnotationAssertion( "homologous_in") AnnotationAssertion( "true"^^xsd:boolean) AnnotationAssertion(rdfs:comment "Status: experimental") AnnotationAssertion(rdfs:label "homologous_in") # Annotation Property: () AnnotationAssertion(rdfs:comment "A grouping class that depends on an assumption of homology between subclasses") SubAnnotationPropertyOf( ) # Annotation Property: () AnnotationAssertion(rdfs:comment "classes that have some inconsistency with FMA") SubAnnotationPropertyOf( ) # Annotation Property: () AnnotationAssertion(rdfs:comment "") SubAnnotationPropertyOf( ) # Annotation Property: () AnnotationAssertion(rdfs:comment "somewhat fuzzy grouping for analysis purposes, currently composed of something like: liver, heart, skeletal, kidney, bladder, brain, skin, mouth, esophagus, stomach, small intestine, large intestines, trachea nose, lungs, brain, spinal cord, peripheral nerves, kidneys, ureters, bladder, urethra, gonads") SubAnnotationPropertyOf( ) # Annotation Property: () AnnotationAssertion(rdfs:comment "core classes typically found across metazoa. one purpose is to create a rough set of terms that could be used to start a new metazoan AO. Note this subset is not yet fully fleshed out") SubAnnotationPropertyOf( ) # Annotation Property: () AnnotationAssertion(rdfs:comment "abstract class brought in to group ontology classes but not informative") SubAnnotationPropertyOf( ) # Annotation Property: () AnnotationAssertion(rdfs:comment "organs, excluding individual muscles and skeletal elements") SubAnnotationPropertyOf( ) # Annotation Property: () AnnotationAssertion(rdfs:comment "Phenotype slim") SubAnnotationPropertyOf( ) # Annotation Property: () AnnotationAssertion(rdfs:comment "A subset specifically created for the 2012 Phenotype RCN meeting. Includes some human-specific terms that may eventually be removed when they are adequately represented with part of relationships in FMA") SubAnnotationPropertyOf( ) # Annotation Property: () AnnotationAssertion(rdfs:comment "Uberon slim - subset that excludes obscure terms and deep compositional terms") SubAnnotationPropertyOf( ) # Annotation Property: () AnnotationAssertion(rdfs:comment "Indicates that the class encompasses classes from other AOs that have not been verified") SubAnnotationPropertyOf( ) # Annotation Property: () AnnotationAssertion(rdfs:comment "abstract upper-level terms not directly useful for analysis") SubAnnotationPropertyOf( ) # Annotation Property: () AnnotationAssertion(rdfs:comment "core classes typically found across vertebrates. one purpose is to create a rough set of terms that could be used to start a new vertebrate AO") SubAnnotationPropertyOf( ) # Annotation Property: () SubAnnotationPropertyOf( ) # Annotation Property: (contributor) AnnotationAssertion( ) AnnotationAssertion( "uberon") AnnotationAssertion( "dc-contributor") AnnotationAssertion( "true"^^xsd:boolean) AnnotationAssertion( "dc-contributor") AnnotationAssertion(rdfs:label "contributor") # Annotation Property: (creator) AnnotationAssertion( ) AnnotationAssertion( "uberon") AnnotationAssertion( "dc-creator") AnnotationAssertion( "true"^^xsd:boolean) AnnotationAssertion( "dc-creator") AnnotationAssertion(rdfs:label "creator") # Annotation Property: (description) AnnotationAssertion( ) AnnotationAssertion( "uberon") AnnotationAssertion( "dc-description") AnnotationAssertion( "true"^^xsd:boolean) AnnotationAssertion( "dc-description") AnnotationAssertion(rdfs:label "description") # Annotation Property: (publisher) AnnotationAssertion( ) AnnotationAssertion( "uberon") AnnotationAssertion( "dc-publisher") AnnotationAssertion( "true"^^xsd:boolean) AnnotationAssertion( "dc-publisher") AnnotationAssertion(rdfs:label "publisher") # Annotation Property: (derived from resource) AnnotationAssertion( ) AnnotationAssertion( "uberon") AnnotationAssertion( "dc-source") AnnotationAssertion( "true"^^xsd:boolean) AnnotationAssertion( "dc-source") AnnotationAssertion(rdfs:label "derived from resource") # Annotation Property: (title) AnnotationAssertion( ) AnnotationAssertion( "uberon") AnnotationAssertion( "dc-title") AnnotationAssertion( "true"^^xsd:boolean) AnnotationAssertion( "dc-title") AnnotationAssertion(rdfs:label "title") # Annotation Property: (is referenced by) AnnotationAssertion( ) AnnotationAssertion( "uberon") AnnotationAssertion( "dcterms-isReferencedBy") AnnotationAssertion( "true"^^xsd:boolean) AnnotationAssertion( "dcterms-isReferencedBy") AnnotationAssertion(rdfs:label "is referenced by") # Annotation Property: (license) AnnotationAssertion( ) AnnotationAssertion( "uberon") AnnotationAssertion( "dcterms-license") AnnotationAssertion( "true"^^xsd:boolean) AnnotationAssertion( "dcterms-license") AnnotationAssertion(rdfs:label "license") # Annotation Property: (Git repository) AnnotationAssertion( ) AnnotationAssertion( "uberon") AnnotationAssertion( "doap-GitRepository") AnnotationAssertion( "true"^^xsd:boolean) AnnotationAssertion( "doap-GitRepository") AnnotationAssertion(rdfs:label "Git repository") # Annotation Property: (SVN repository) AnnotationAssertion( ) AnnotationAssertion( "uberon") AnnotationAssertion( "doap-SVNRepository") AnnotationAssertion( "true"^^xsd:boolean) AnnotationAssertion( "doap-SVNRepository") AnnotationAssertion(rdfs:label "SVN repository") # Annotation Property: (bug database) AnnotationAssertion( ) AnnotationAssertion( "uberon") AnnotationAssertion( "doap-bug-database") AnnotationAssertion( "true"^^xsd:boolean) AnnotationAssertion( "doap-bug-database") AnnotationAssertion(rdfs:label "bug database") # Annotation Property: (mailing list) AnnotationAssertion( ) AnnotationAssertion( "uberon") AnnotationAssertion( "doap-mailing-list") AnnotationAssertion( "true"^^xsd:boolean) AnnotationAssertion( "doap-mailing-list") AnnotationAssertion(rdfs:label "mailing list") # Annotation Property: (wiki) AnnotationAssertion( ) AnnotationAssertion( "uberon") AnnotationAssertion( "doap-wiki") AnnotationAssertion( "true"^^xsd:boolean) AnnotationAssertion( "doap-wiki") AnnotationAssertion(rdfs:label "wiki") # Annotation Property: (subset_property) AnnotationAssertion(rdfs:label "subset_property") # Annotation Property: (synonym_type_property) AnnotationAssertion(rdfs:label "synonym_type_property") # Annotation Property: (consider) AnnotationAssertion(rdfs:label "consider") # Annotation Property: (has_alternative_id) AnnotationAssertion(rdfs:label "has_alternative_id") # Annotation Property: (has_broad_synonym) AnnotationAssertion(rdfs:label "has_broad_synonym") # Annotation Property: (database_cross_reference) AnnotationAssertion(rdfs:label "database_cross_reference") # Annotation Property: (has_exact_synonym) AnnotationAssertion(rdfs:label "has_exact_synonym") # Annotation Property: (has_narrow_synonym) AnnotationAssertion(rdfs:label "has_narrow_synonym") # Annotation Property: (has_obo_format_version) AnnotationAssertion(rdfs:label "has_obo_format_version") # Annotation Property: (has_obo_namespace) AnnotationAssertion(rdfs:label "has_obo_namespace") # Annotation Property: (has_related_synonym) AnnotationAssertion(rdfs:label "has_related_synonym") # Annotation Property: (has_scope) AnnotationAssertion(rdfs:label "has_scope") # Annotation Property: (has_synonym_type) AnnotationAssertion(rdfs:label "has_synonym_type") # Annotation Property: (in_subset) AnnotationAssertion(rdfs:label "in_subset") # Annotation Property: (shorthand) AnnotationAssertion(rdfs:label "shorthand") # Annotation Property: (treat-xrefs-as-equivalent) AnnotationAssertion(rdfs:label "treat-xrefs-as-equivalent") # Annotation Property: (treat-xrefs-as-has-subclass) AnnotationAssertion(rdfs:label "treat-xrefs-as-has-subclass") # Annotation Property: (treat-xrefs-as-is_a) AnnotationAssertion(rdfs:label "treat-xrefs-as-is_a") # Annotation Property: (treat-xrefs-as-reverse-genus-differentia) AnnotationAssertion(rdfs:label "treat-xrefs-as-reverse-genus-differentia") # Annotation Property: rdfs:seeAlso (see also) AnnotationAssertion( rdfs:seeAlso rdfs:seeAlso) AnnotationAssertion( rdfs:seeAlso "seeAlso") AnnotationAssertion( rdfs:seeAlso "uberon") AnnotationAssertion( rdfs:seeAlso "seeAlso") AnnotationAssertion( rdfs:seeAlso "true"^^xsd:boolean) AnnotationAssertion( rdfs:seeAlso "seeAlso") AnnotationAssertion(rdfs:label rdfs:seeAlso "see also") # Annotation Property: (depicted by) AnnotationAssertion( ) AnnotationAssertion( "uberon") AnnotationAssertion( "depicted_by") AnnotationAssertion( "true"^^xsd:boolean) AnnotationAssertion( "depicted_by") AnnotationAssertion(rdfs:label "depicted by") # Annotation Property: (homepage) AnnotationAssertion( ) AnnotationAssertion( "uberon") AnnotationAssertion( "foaf-homepage") AnnotationAssertion( "true"^^xsd:boolean) AnnotationAssertion( "foaf-homepage") AnnotationAssertion(rdfs:label "homepage") # Annotation Property: (page) AnnotationAssertion( ) AnnotationAssertion( "uberon") AnnotationAssertion( "foaf-page") AnnotationAssertion( "true"^^xsd:boolean) AnnotationAssertion( "foaf-page") AnnotationAssertion(rdfs:label "page") ############################ # Object Properties ############################ # Object Property: (part of) AnnotationAssertion( "is part of") AnnotationAssertion( "my brain is part of my body (continuant parthood, two material entities)") AnnotationAssertion( "my stomach cavity is part of my stomach (continuant parthood, immaterial entity is part of material entity)") AnnotationAssertion( "this day is part of this year (occurrent parthood)") AnnotationAssertion( "a core relation that holds between a part and its whole") AnnotationAssertion( "a core relation that holds between a part and its whole"@en) AnnotationAssertion( "Everything is part of itself. Any part of any part of a thing is itself part of that thing. Two distinct things cannot be part of each other.") AnnotationAssertion( "Occurrents are not subject to change and so parthood between occurrents holds for all the times that the part exists. Many continuants are subject to change, so parthood between continuants will only hold at certain times, but this is difficult to specify in OWL. See http://purl.obolibrary.org/obo/ro/docs/temporal-semantics/") AnnotationAssertion( "Occurrents are not subject to change and so parthood between occurrents holds for all the times that the part exists. Many continuants are subject to change, so parthood between continuants will only hold at certain times, but this is difficult to specify in OWL. See https://code.google.com/p/obo-relations/wiki/ROAndTime") AnnotationAssertion( "Parthood requires the part and the whole to have compatible classes: only an occurrent can be part of an occurrent; only a process can be part of a process; only a continuant can be part of a continuant; only an independent continuant can be part of an independent continuant; only an immaterial entity can be part of an immaterial entity; only a specifically dependent continuant can be part of a specifically dependent continuant; only a generically dependent continuant can be part of a generically dependent continuant. (This list is not exhaustive.) A continuant cannot be part of an occurrent: use 'participates in'. An occurrent cannot be part of a continuant: use 'has participant'. A material entity cannot be part of an immaterial entity: use 'has location'. A specifically dependent continuant cannot be part of an independent continuant: use 'inheres in'. An independent continuant cannot be part of a specifically dependent continuant: use 'bearer of'.") AnnotationAssertion( "part_of") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BFO:0000050") AnnotationAssertion( "external") AnnotationAssertion( "protein") AnnotationAssertion( "quality") AnnotationAssertion( "uberon") AnnotationAssertion( "part_of") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "part_of") AnnotationAssertion(rdfs:label "part of") AnnotationAssertion(rdfs:label "part of"@en) AnnotationAssertion(rdfs:label "part_of") AnnotationAssertion(rdfs:seeAlso ) AnnotationAssertion(rdfs:seeAlso ) AnnotationAssertion(rdfs:seeAlso "http://www.obofoundry.org/ro/#OBO_REL:part_of") SubObjectPropertyOf( ) InverseObjectProperties( ) TransitiveObjectProperty() # Object Property: (has part) AnnotationAssertion( "has part") AnnotationAssertion( "my body has part my brain (continuant parthood, two material entities)") AnnotationAssertion( "my stomach has part my stomach cavity (continuant parthood, material entity has part immaterial entity)") AnnotationAssertion( "this year has part this day (occurrent parthood)") AnnotationAssertion( "Q1 has_part Q2 if and only if: every instance of Q1 is a quality_of an entity that has_quality some Q2.") AnnotationAssertion( "a core relation that holds between a whole and its part") AnnotationAssertion( "a core relation that holds between a whole and its part"@en) AnnotationAssertion( "Everything has itself as a part. Any part of any part of a thing is itself part of that thing. Two distinct things cannot have each other as a part.") AnnotationAssertion( "Occurrents are not subject to change and so parthood between occurrents holds for all the times that the part exists. Many continuants are subject to change, so parthood between continuants will only hold at certain times, but this is difficult to specify in OWL. See http://purl.obolibrary.org/obo/ro/docs/temporal-semantics/") AnnotationAssertion( "Occurrents are not subject to change and so parthood between occurrents holds for all the times that the part exists. Many continuants are subject to change, so parthood between continuants will only hold at certain times, but this is difficult to specify in OWL. See https://code.google.com/p/obo-relations/wiki/ROAndTime") AnnotationAssertion( "Parthood requires the part and the whole to have compatible classes: only an occurrent have an occurrent as part; only a process can have a process as part; only a continuant can have a continuant as part; only an independent continuant can have an independent continuant as part; only a specifically dependent continuant can have a specifically dependent continuant as part; only a generically dependent continuant can have a generically dependent continuant as part. (This list is not exhaustive.) A continuant cannot have an occurrent as part: use 'participates in'. An occurrent cannot have a continuant as part: use 'has participant'. An immaterial entity cannot have a material entity as part: use 'location of'. An independent continuant cannot have a specifically dependent continuant as part: use 'bearer of'. A specifically dependent continuant cannot have an independent continuant as part: use 'inheres in'.") AnnotationAssertion( "has_part") AnnotationAssertion( ) AnnotationAssertion( "BFO:0000051") AnnotationAssertion( "chebi_ontology") AnnotationAssertion( "external") AnnotationAssertion( "protein") AnnotationAssertion( "quality") AnnotationAssertion( "uberon") AnnotationAssertion( "has_part") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "false"^^xsd:boolean) AnnotationAssertion( "has_part") AnnotationAssertion(rdfs:comment "We use the has_part relation to relate complex qualities to more primitive ones. A complex quality is a collection of qualities. The complex quality cannot exist without the sub-qualities. For example, the quality 'swollen' necessarily comes with the qualities of 'protruding' and 'increased size'.") AnnotationAssertion(rdfs:label "has part") AnnotationAssertion(rdfs:label "has part"@en) AnnotationAssertion(rdfs:label "has_part") SubObjectPropertyOf( ) TransitiveObjectProperty() # Object Property: (preceded by) AnnotationAssertion( "X preceded_by Y iff: end(Y) before_or_simultaneous_with start(X).") AnnotationAssertion( "x is preceded by y if and only if the time point at which y ends is before or equivalent to the time point at which x starts. Formally: x preceded by y iff ω(y) <= α(x), where α is a function that maps a process to a start point, and ω is a function that maps a process to an end point."@en) AnnotationAssertion( "BFO:0000062") AnnotationAssertion(Annotation( "SIO:000249") "is preceded by") AnnotationAssertion(Annotation( "Allen:precedes") "takes place after") AnnotationAssertion( "uberon") AnnotationAssertion( "preceded_by") AnnotationAssertion( "preceded_by") AnnotationAssertion(rdfs:label "preceded by") AnnotationAssertion(rdfs:label "preceded by"@en) AnnotationAssertion(rdfs:label "preceded_by") InverseObjectProperties( ) TransitiveObjectProperty() # Object Property: (precedes) AnnotationAssertion( "x precedes y if and only if the time point at which x ends is before or equivalent to the time point at which y starts. Formally: x precedes y iff ω(x) <= α(y), where α is a function that maps a process to a start point, and ω is a function that maps a process to an end point."@en) AnnotationAssertion( "BFO:0000063") AnnotationAssertion( "uberon") AnnotationAssertion( "precedes") AnnotationAssertion( "precedes") AnnotationAssertion(rdfs:label "precedes") AnnotationAssertion(rdfs:label "precedes"@en) TransitiveObjectProperty() # Object Property: (contains process) AnnotationAssertion( "[copied from inverse property 'occurs in'] b occurs_in c =def b is a process and c is a material entity or immaterial entity& there exists a spatiotemporal region r and b occupies_spatiotemporal_region r.& forall(t) if b exists_at t then c exists_at t & there exist spatial regions s and s’ where & b spatially_projects_onto s at t& c is occupies_spatial_region s’ at t& s is a proper_continuant_part_of s’ at t"@en) AnnotationAssertion( "BFO:0000067") AnnotationAssertion( "uberon") AnnotationAssertion( "contains_process") AnnotationAssertion( "contains_process") AnnotationAssertion(rdfs:label "contains process") AnnotationAssertion(rdfs:label "contains process"@en) # Object Property: (anterior_to) AnnotationAssertion(Annotation( "BSPO:cjm"^^xsd:string) "x anterior to y iff x is further along the antero-posterior axis than y, towards the head. An antero-posterior axis is an axis that extends through an organism from head end to opposite end of body or tail.") AnnotationAssertion(Annotation( ) "x anterior_to y iff x is further along the antero-posterior axis than y, towards the head. An antero-posterior axis is an axis that bisects an organism from head end to opposite end of body or tail: bearer.") AnnotationAssertion( "cjm") AnnotationAssertion( "2009-07-31T02:15:46Z") AnnotationAssertion( "BSPO:0000096") AnnotationAssertion( "uberon") AnnotationAssertion( "anterior_to") AnnotationAssertion( "anterior_to") AnnotationAssertion(rdfs:label "anterior to") AnnotationAssertion(rdfs:label "anterior_to") InverseObjectProperties( ) TransitiveObjectProperty() # Object Property: (distal_to) AnnotationAssertion(Annotation( "BSPO:cjm"^^xsd:string) "x distal to y iff x is further along the proximo-distal axis than y, towards the appendage tip. A proximo-distal axis extends from tip of an appendage (distal) to where it joins the body (proximal).") AnnotationAssertion(Annotation( ) "x distal_to y iff x is further along the proximo-distal axis than y, towards the appendage tip. A proximo-distal axis extends from tip of an appendage (distal) to where it joins the body (proximal).") AnnotationAssertion( "BSPO:0000097") AnnotationAssertion( "uberon") AnnotationAssertion( "distal_to") AnnotationAssertion( "distal_to") AnnotationAssertion(rdfs:label "distal to") AnnotationAssertion(rdfs:label "distal_to") InverseObjectProperties( ) TransitiveObjectProperty() # Object Property: (dorsal_to) AnnotationAssertion(Annotation( "BSPO:cjm"^^xsd:string) "x dorsal to y iff x is further along the dorso-ventral axis than y, towards the back. A dorso-ventral axis is an axis that extends through an organism from back (e.g. spinal column) to front (e.g. belly).") AnnotationAssertion(Annotation( ) "x dorsal_to y iff x is further along the dorso-ventral axis than y, towards the back. A dorso-ventral axis is an axis that bisects an organism from back (e.g. spinal column) to front (e.g. belly).") AnnotationAssertion( "BSPO:0000098") AnnotationAssertion( "uberon") AnnotationAssertion( "dorsal_to") AnnotationAssertion( "dorsal_to") AnnotationAssertion(rdfs:label "dorsal to") AnnotationAssertion(rdfs:label "dorsal_to") InverseObjectProperties( ) TransitiveObjectProperty() # Object Property: (posterior to) AnnotationAssertion(Annotation( "BSPO:cjm"^^xsd:string) "x posterior to y iff x is further along the antero-posterior axis than y, towards the body/tail. An antero-posterior axis is an axis that extends through an organism from head end to opposite end of body or tail.") AnnotationAssertion(Annotation( ) "x posterior_to y iff x is further along the antero-posterior axis than y, towards the body/tail. An antero-posterior axis is an axis that bisects an organism from head end to opposite end of body or tail.") AnnotationAssertion( "BSPO:0000099") AnnotationAssertion( "caudal_to") AnnotationAssertion( "uberon") AnnotationAssertion( "posterior_to") AnnotationAssertion( "posterior_to") AnnotationAssertion(rdfs:label "posterior to") AnnotationAssertion(rdfs:label "posterior_to") TransitiveObjectProperty() # Object Property: (proximal_to) AnnotationAssertion(Annotation( "BSPO:cjm"^^xsd:string) "x proximal to y iff x is closer to the point of attachment with the body than y.") AnnotationAssertion(Annotation( ) "x proximal_to y iff x is closer to the point of attachment with the body than y.") AnnotationAssertion( "BSPO:0000100") AnnotationAssertion( "uberon") AnnotationAssertion( "proximal_to") AnnotationAssertion( "proximal_to") AnnotationAssertion(rdfs:label "proximal to") AnnotationAssertion(rdfs:label "proximal_to") TransitiveObjectProperty() # Object Property: (ventral_to) AnnotationAssertion(Annotation( "BSPO:cjm"^^xsd:string) "x ventral to y iff x is further along the dorso-ventral axis than y, towards the front. A dorso-ventral axis is an axis that extends through an organism from back (e.g. spinal column) to front (e.g. belly).") AnnotationAssertion(Annotation( ) "x ventral_to y iff x is further along the dorso-ventral axis than y, towards the front. A dorso-ventral axis is an axis that bisects an organism from back (e.g. spinal column) to front (e.g. belly).") AnnotationAssertion( "BSPO:0000102") AnnotationAssertion( "uberon") AnnotationAssertion( "ventral_to") AnnotationAssertion( "ventral_to") AnnotationAssertion(rdfs:label "ventral to") AnnotationAssertion(rdfs:label "ventral_to") TransitiveObjectProperty() # Object Property: (deep to) AnnotationAssertion(Annotation( "BSPO:cjm"^^xsd:string) "Further away from the surface of the organism. Thus, the muscular layer is deep to the skin, but superficial to the intestines.") AnnotationAssertion( "BSPO:0000107") AnnotationAssertion( "uberon") AnnotationAssertion( "deep_to") AnnotationAssertion( "deep_to") AnnotationAssertion(rdfs:label "deep to") AnnotationAssertion(rdfs:label "deep_to") InverseObjectProperties( ) TransitiveObjectProperty() # Object Property: (superficial_to) AnnotationAssertion(Annotation( "BSPO:cjm"^^xsd:string) "Near the outer surface of the organism. Thus, skin is superficial to the muscle layer.") AnnotationAssertion( "BSPO:0000108") AnnotationAssertion( "uberon") AnnotationAssertion( "superficial_to") AnnotationAssertion( "superficial_to") AnnotationAssertion(rdfs:label "superficial to") AnnotationAssertion(rdfs:label "superficial_to") TransitiveObjectProperty() # Object Property: (in_left_side_of) AnnotationAssertion(Annotation( "BSPO:PATO_mtg_2009") "X in left side of Y <=> if Y is subdivided into two left and right portions, X is part of the left portion.") AnnotationAssertion(Annotation( "BSPO:PATO_mtg_2009") "X in_left_side_of Y <=> if Y is subdivided into left and right portions, X is part_of the left portion.") AnnotationAssertion( "BSPO:0000120") AnnotationAssertion( "uberon") AnnotationAssertion( "in_left_side_of") AnnotationAssertion( "in_left_side_of") AnnotationAssertion(rdfs:label "in left side of") AnnotationAssertion(rdfs:label "in_left_side_of") AnnotationAssertion(rdfs:seeAlso "https://github.com/obophenotype/uberon/wiki/Modeling-paired-structures-Design-Pattern"^^xsd:anyURI) SubObjectPropertyOf( ) DisjointObjectProperties( ) # Object Property: (in_right_side_of) AnnotationAssertion(Annotation( "BSPO:PATO_mtg_2009") "X in right side of Y <=> if Y is subdivided into two left and right portions, X is part of the right portion.") AnnotationAssertion(Annotation( "BSPO:PATO_mtg_2009") "X in_right_side_of Y <=> if Y is subdivided into left and right portions, X is part_of the right portion.") AnnotationAssertion( "BSPO:0000121") AnnotationAssertion( "uberon") AnnotationAssertion( "in_right_side_of") AnnotationAssertion( "in_right_side_of") AnnotationAssertion(rdfs:label "in right side of") AnnotationAssertion(rdfs:label "in_right_side_of") AnnotationAssertion(rdfs:seeAlso "https://github.com/obophenotype/uberon/wiki/Modeling-paired-structures-Design-Pattern"^^xsd:anyURI) SubObjectPropertyOf( ) # Object Property: (in posterior side of) AnnotationAssertion(Annotation( "BSPO:PATO_mtg_2009") "X posterior side of Y <=> if Y is subdivided into two anterior and posterior portions, X is part of the posterior portion.") AnnotationAssertion(Annotation( "BSPO:PATO_mtg_2009") "X posterior_side_of Y <=> if Y is subdivided into two anterior and posterior portions, X is part_of the posterior portion.") AnnotationAssertion( "BSPO:0000122") AnnotationAssertion( "uberon") AnnotationAssertion( "in_posterior_side_of") AnnotationAssertion( "in_posterior_side_of") AnnotationAssertion(rdfs:label "in posterior side of") AnnotationAssertion(rdfs:label "in_posterior_side_of") SubObjectPropertyOf( ) # Object Property: (in_anterior_side_of) AnnotationAssertion(Annotation( "BSPO:PATO_mtg_2009") "X anterior side of Y <=> if Y is subdivided into two anterior and posterior portions, X is part of the anterior portion.") AnnotationAssertion(Annotation( "BSPO:PATO_mtg_2009") "X anterior_side_of Y <=> if Y is subdivided into two anterior and posterior portions, X is part_of the anterior portion.") AnnotationAssertion( "BSPO:0000123") AnnotationAssertion( "uberon") AnnotationAssertion( "in_anterior_side_of") AnnotationAssertion( "in_anterior_side_of") AnnotationAssertion(rdfs:label "in anterior side of") AnnotationAssertion(rdfs:label "in_anterior_side_of") SubObjectPropertyOf( ) # Object Property: (in_proximal_side_of) AnnotationAssertion(Annotation( "BSPO:PATO_mtg_2009") "X proximal_side_of Y <=> if Y is subdivided into distal and proximal portions, X is part_of the proximal portion.") AnnotationAssertion(Annotation( "BSPO:PATO_mtg_2009") "x in proximal side of y <=> if y is subdivided into two proximal and distal portions, y is part of the proximal portion.") AnnotationAssertion( "BSPO:0000124") AnnotationAssertion( "uberon") AnnotationAssertion( "in_proximal_side_of") AnnotationAssertion( "in_proximal_side_of") AnnotationAssertion(rdfs:label "in proximal side of") AnnotationAssertion(rdfs:label "in_proximal_side_of") SubObjectPropertyOf( ) InverseObjectProperties( ) # Object Property: (in distal side of) AnnotationAssertion(Annotation( "BSPO:PATO_mtg_2009") "X distal_side_of Y <=> if Y is subdivided into distal and proximal portions, X is part_of the distal portion.") AnnotationAssertion(Annotation( "BSPO:PATO_mtg_2009") "x in distal side of y <=> if y is subdivided into two proximal and distal portions, y is part of the distal portion.") AnnotationAssertion( "BSPO:0000125") AnnotationAssertion( "uberon") AnnotationAssertion( "in_distal_side_of") AnnotationAssertion( "in_distal_side_of") AnnotationAssertion(rdfs:label "in distal side of") AnnotationAssertion(rdfs:label "in_distal_side_of") SubObjectPropertyOf( ) # Object Property: (in lateral side of) AnnotationAssertion(Annotation( "UBERON:cjm"^^xsd:string) "X in lateral side of Y <=> if X is in left side of Y or X is in right side of Y. X is often, but not always a paired structure") AnnotationAssertion(Annotation( ) "X in_lateral_side_of Y <=> if X is in_left_side_of Y or X is in_right_side_of Y. X is often, but not always a paired structure.") AnnotationAssertion( "BSPO:0000126") AnnotationAssertion( "uberon") AnnotationAssertion( "in_lateral_side_of") AnnotationAssertion( "in_lateral_side_of") AnnotationAssertion(rdfs:label "in lateral side of") AnnotationAssertion(rdfs:label "in_lateral_side_of") AnnotationAssertion(rdfs:seeAlso "https://github.com/obophenotype/uberon/wiki/Modeling-paired-structures-Design-Pattern"^^xsd:anyURI) SubObjectPropertyOf( ) DisjointObjectProperties( ) # Object Property: (in_superficial_part_of) AnnotationAssertion(Annotation( "BSPO:cjm"^^xsd:string) "X superficial part of Y <=> if Y is subdivided into two superficial and deep portions, X is part of the superficial portion.") AnnotationAssertion(Annotation( ) "X superficial_part_of Y <=> if Y is subdivided into two superficial and deep portions, X is part_of the superficial portion.") AnnotationAssertion( "BSPO:0001100") AnnotationAssertion( "uberon") AnnotationAssertion( "in_superficial_part_of") AnnotationAssertion( "in_superficial_part_of") AnnotationAssertion(rdfs:label "in superficial part of") AnnotationAssertion(rdfs:label "in_superficial_part_of") SubObjectPropertyOf( ) # Object Property: (in_deep_part_of) AnnotationAssertion(Annotation( "BSPO:cjm"^^xsd:string) "X superficial part of Y <=> if Y is subdivided into two superficial and deep portions, X is part of the deep portion.") AnnotationAssertion(Annotation( ) "X superficial_part_of Y <=> if Y is subdivided into two superficial and deep portions, X is part_of the deep portion.") AnnotationAssertion( "BSPO:0001101") AnnotationAssertion( "uberon") AnnotationAssertion( "in_deep_part_of") AnnotationAssertion( "in_deep_part_of") AnnotationAssertion(rdfs:label "in deep part of") AnnotationAssertion(rdfs:label "in_deep_part_of") SubObjectPropertyOf( ) # Object Property: (proximalmost part of) AnnotationAssertion(Annotation( ) "X proximalmost part of Y <=> X is in proximal side of Y and X is adjacent to the proximal boundary of Y") AnnotationAssertion(Annotation( "https://orcid.org/0000-0002-6601-2165") "X proximalmost part of Y <=> X is in proximal side of Y and X is adjacent to the proximal boundary of Y") AnnotationAssertion(Annotation( ) "X proximalmost_part_of Y <=> X is part_of Y and X is adjacent_to the proximal boundary of Y.") AnnotationAssertion( "BSPO:0001106") AnnotationAssertion( "uberon") AnnotationAssertion( "proximalmost_part_of") AnnotationAssertion( "proximalmost_part_of") AnnotationAssertion(rdfs:label "proximalmost part of") AnnotationAssertion(rdfs:label "proximalmost_part_of") SubObjectPropertyOf( ) # Object Property: (immediately deep to) AnnotationAssertion(Annotation( ) "This relation holds when both the deep_to and ajdacent_to relationship similarly hold.") AnnotationAssertion(Annotation( "BSPO:curators") "x immediately deep to y iff x deep_to y and x is contiguous with y.") AnnotationAssertion( "BSPO:0001107") AnnotationAssertion( "uberon") AnnotationAssertion( "immediately_deep_to") AnnotationAssertion( "immediately_deep_to") AnnotationAssertion(rdfs:label "immediately deep to") AnnotationAssertion(rdfs:label "immediately_deep_to") SubObjectPropertyOf( ) SubObjectPropertyOf( ) InverseObjectProperties( ) # Object Property: (distalmost part of) AnnotationAssertion(Annotation( ) "X distalmost part of Y <=> X is in distal side of Y and X is adjacent to the distal boundary of Y") AnnotationAssertion(Annotation( "https://orcid.org/0000-0002-6601-2165") "X distalmost part of Y <=> X is in distal side of Y and X is adjacent to the distal boundary of Y") AnnotationAssertion(Annotation( ) "X distalmost_part_of Y <=> X is part_of Y and X is adjacent_to the distal boundary of Y.") AnnotationAssertion( "BSPO:0001108") AnnotationAssertion( "uberon") AnnotationAssertion( "distalmost_part_of") AnnotationAssertion( "distalmost_part_of") AnnotationAssertion(rdfs:label "distalmost part of") AnnotationAssertion(rdfs:label "distalmost_part_of") SubObjectPropertyOf( ) # Object Property: (preaxialmost part of) AnnotationAssertion( "BSPO:0001113") AnnotationAssertion( "uberon") AnnotationAssertion( "preaxialmost_part_of") AnnotationAssertion( "preaxialmost_part_of") AnnotationAssertion(rdfs:label "preaxialmost part of") AnnotationAssertion(rdfs:label "preaxialmost_part_of") SubObjectPropertyOf( ) # Object Property: (postaxial_to) AnnotationAssertion(Annotation( ) "x preaxial_to y iff x is further along the preaxial-postaxial axis than y, towards the postaxial side.") AnnotationAssertion( "BSPO:0001114") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "posterior_to (developmentally)") AnnotationAssertion( "postaxial_to") AnnotationAssertion( "postaxial_to") AnnotationAssertion(rdfs:label "postaxial_to") TransitiveObjectProperty() # Object Property: (postaxialmost part of) AnnotationAssertion( "BSPO:0001115") AnnotationAssertion( "uberon") AnnotationAssertion( "postaxialmost_part_of") AnnotationAssertion( "postaxialmost_part_of") AnnotationAssertion(rdfs:label "postaxialmost part of") AnnotationAssertion(rdfs:label "postaxialmost_part_of") SubObjectPropertyOf( ) # Object Property: (intersects_midsagittal_plane_of) AnnotationAssertion( "X intersects median plane of iff X crosses the midine plane of Y.") AnnotationAssertion( "X intersects_median_plane of iff X crosses the midine plane of Y.") AnnotationAssertion( "BSPO:0005001") AnnotationAssertion( "uberon") AnnotationAssertion( "intersects_midsagittal_plane_of") AnnotationAssertion( "intersects_midsagittal_plane_of") AnnotationAssertion(rdfs:label "intersects midsagittal plane of") AnnotationAssertion(rdfs:label "intersects_midsagittal_plane_of") SubObjectPropertyOf( ) # Object Property: (immediately anterior to) AnnotationAssertion(Annotation( "BSPO:curators") "x immediately anterior to y iff x anterior to y and x is contiguous with y.") AnnotationAssertion( "BSPO:0015009") AnnotationAssertion( "uberon") AnnotationAssertion( "immediately_anterior_to") AnnotationAssertion( "immediately_anterior_to") AnnotationAssertion(rdfs:label "immediately anterior to") AnnotationAssertion(rdfs:label "immediately_anterior_to") SubObjectPropertyOf( ) SubObjectPropertyOf( ) InverseObjectProperties( ) # Object Property: (immediately posterior to) AnnotationAssertion(Annotation( "BSPO:curators") "x immediately posterior to y iff x posterior_to y and x is contiguous with y.") AnnotationAssertion( "BSPO:0015012") AnnotationAssertion( "uberon") AnnotationAssertion( "immediately_posterior_to") AnnotationAssertion( "immediately_posterior_to") AnnotationAssertion(rdfs:label "immediately posterior to") AnnotationAssertion(rdfs:label "immediately_posterior_to") SubObjectPropertyOf( ) SubObjectPropertyOf( ) # Object Property: (immediately superficial to) AnnotationAssertion(Annotation( "BSPO:curators") "x immediately superficial to y iff x superficial to y and x is contiguous with y.") AnnotationAssertion( "BSPO:0015014") AnnotationAssertion( "uberon") AnnotationAssertion( "immediately_superficial_to") AnnotationAssertion( "immediately_superficial_to") AnnotationAssertion(rdfs:label "immediately superficial to") AnnotationAssertion(rdfs:label "immediately_superficial_to") SubObjectPropertyOf( ) SubObjectPropertyOf( ) # Object Property: (in_dorsal_side_of) AnnotationAssertion(Annotation( "BSPO:cjm"^^xsd:string) "X dorsal side of Y <=> if Y is subdivided into two dorsal and ventral portions, X is part of the dorsal portion.") AnnotationAssertion( "BSPO:0015101") AnnotationAssertion( "uberon") AnnotationAssertion( "in_dorsal_side_of") AnnotationAssertion( "in_dorsal_side_of") AnnotationAssertion(rdfs:label "in dorsal side of") AnnotationAssertion(rdfs:label "in_dorsal_side_of") SubObjectPropertyOf( ) # Object Property: (in_ventral_side_of) AnnotationAssertion(Annotation( "BSPO:cjm"^^xsd:string) "X ventral side of Y <=> if Y is subdivided into two dorsal and ventral portions, X is part of the ventral portion.") AnnotationAssertion( "BSPO:0015102") AnnotationAssertion( "uberon") AnnotationAssertion( "in_ventral_side_of") AnnotationAssertion( "in_ventral_side_of") AnnotationAssertion(rdfs:label "in ventral side of") AnnotationAssertion(rdfs:label "in_ventral_side_of") SubObjectPropertyOf( ) # Object Property: (oral_to) AnnotationAssertion(Annotation( "BSPO:cjm"^^xsd:string) "nearer to the oral opening of the organism, on the oral-aboral axis.") AnnotationAssertion( "BSPO:0015201") AnnotationAssertion( "uberon") AnnotationAssertion( "oral_to") AnnotationAssertion( "oral_to") AnnotationAssertion(rdfs:label "oral_to") TransitiveObjectProperty() # Object Property: (aboral to) AnnotationAssertion(Annotation( "BSPO:cjm"^^xsd:string) "nearer to the aboral opening of the organism, on the oral-aboral axis.") AnnotationAssertion( "BSPO:0015202") AnnotationAssertion( "uberon") AnnotationAssertion( "aboral_to") AnnotationAssertion( "aboral_to") AnnotationAssertion(rdfs:label "aboral to") AnnotationAssertion(rdfs:label "aboral_to") TransitiveObjectProperty() # Object Property: (preaxial_to) AnnotationAssertion(Annotation( ) "x preaxial_to y iff x is further along the preaxial-postaxial axis than y, towards the front.") AnnotationAssertion( "BSPO:1000000") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "anterior_to (developmentally)") AnnotationAssertion( "lateral (radial) to") AnnotationAssertion( "medial (tibial) to") AnnotationAssertion( "preaxial_to") AnnotationAssertion( "preaxial_to") AnnotationAssertion(rdfs:label "preaxial_to") TransitiveObjectProperty() # Object Property: (has characteristic) AnnotationAssertion( "Inverse of characteristic_of"@en) AnnotationAssertion( "RO:0000053") AnnotationAssertion( "uberon") AnnotationAssertion( "bearer_of") AnnotationAssertion( "bearer_of") AnnotationAssertion(rdfs:label "has characteristic"@en) InverseFunctionalObjectProperty() # Object Property: (participates in) AnnotationAssertion( "a relation between a continuant and a process, in which the continuant is somehow involved in the process"@en) AnnotationAssertion( "RO:0000056") AnnotationAssertion( "uberon") AnnotationAssertion( "participates_in") AnnotationAssertion( "participates_in") AnnotationAssertion(rdfs:label "participates in"@en) # Object Property: (has quality) AnnotationAssertion( "a relation between an independent continuant (the bearer) and a quality, in which the quality specifically depends on the bearer for its existence"@en) AnnotationAssertion( "RO:0000086") AnnotationAssertion( "uberon") AnnotationAssertion( "has_quality") AnnotationAssertion( "has_quality") AnnotationAssertion(rdfs:label "has quality"@en) SubObjectPropertyOf( ) # Object Property: (location of) AnnotationAssertion( "a relation between two independent continuants, the location and the target, in which the target is entirely within the location"@en) AnnotationAssertion( "RO:0001015") AnnotationAssertion( "uberon") AnnotationAssertion( "location_of") AnnotationAssertion( "location_of") AnnotationAssertion(rdfs:label "location of"@en) InverseObjectProperties( ) TransitiveObjectProperty() # Object Property: (contains) AnnotationAssertion( "RO:0001019") AnnotationAssertion( "uberon") AnnotationAssertion( "contains") AnnotationAssertion( "contains") AnnotationAssertion(rdfs:label "contains"@en) # Object Property: (located in) AnnotationAssertion( "a relation between two independent continuants, the target and the location, in which the target is entirely within the location"@en) AnnotationAssertion( "RO:0001025") AnnotationAssertion( "uberon") AnnotationAssertion( "located_in") AnnotationAssertion( "located_in") AnnotationAssertion(rdfs:label "located in"@en) TransitiveObjectProperty() # Object Property: (2D boundary of) AnnotationAssertion( "a relation between a 2D immaterial entity (the boundary) and a material entity, in which the boundary delimits the material entity"@en) AnnotationAssertion( "RO:0002000") AnnotationAssertion( "uberon") AnnotationAssertion( "boundary_of") AnnotationAssertion( "boundary_of") AnnotationAssertion(rdfs:label "2D boundary of"@en) InverseObjectProperties( ) # Object Property: (has 2D boundary) AnnotationAssertion( "a relation between a material entity and a 2D immaterial entity (the boundary), in which the boundary delimits the material entity"@en) AnnotationAssertion( "RO:0002002") AnnotationAssertion( "uberon") AnnotationAssertion( "has_boundary") AnnotationAssertion( "has_boundary") AnnotationAssertion(rdfs:label "has 2D boundary"@en) # Object Property: (innervated_by) AnnotationAssertion( "RO:0002005") AnnotationAssertion(Annotation( "FMA:85999") "nerve supply") AnnotationAssertion( "uberon") AnnotationAssertion( "innervated_by") AnnotationAssertion( "innervated_by") AnnotationAssertion(rdfs:comment "http://code.google.com/p/obo-relations/issues/detail?id=6") AnnotationAssertion(rdfs:label "innervated_by"@en) AnnotationAssertion(rdfs:seeAlso ) AnnotationAssertion(rdfs:seeAlso ) InverseObjectProperties( ) # Object Property: (bounding layer of) AnnotationAssertion( "X outer_layer_of Y iff: . X :continuant that bearer_of some PATO:laminar . X part_of Y . exists Z :surface . X has_boundary Z . Z boundary_of Y has_boundary: http://purl.obolibrary.org/obo/RO_0002002 boundary_of: http://purl.obolibrary.org/obo/RO_0002000") AnnotationAssertion( "RO:0002007") AnnotationAssertion( "uberon") AnnotationAssertion( "bounding_layer_of") AnnotationAssertion( "bounding_layer_of") AnnotationAssertion(rdfs:comment "A relationship that applies between a continuant and its outer, bounding layer. Examples include the relationship between a multicellular organism and its integument, between an animal cell and its plasma membrane, and between a membrane bound organelle and its outer/bounding membrane.") AnnotationAssertion(rdfs:label "bounding layer of"@en) SubObjectPropertyOf( ) # Object Property: (simultaneous with) AnnotationAssertion(Annotation( ) Annotation( "Allen:is_equal_to") "Relation between occurrents, shares start and end boundaries.") AnnotationAssertion( "RO:0002082") AnnotationAssertion( "coincides_with") AnnotationAssertion( "is_equal_to") AnnotationAssertion( "uberon") AnnotationAssertion( "simultaneous_with") AnnotationAssertion( "simultaneous_with") AnnotationAssertion(rdfs:label "simultaneous with"@en) SubObjectPropertyOf( ) SubObjectPropertyOf( ) TransitiveObjectProperty() # Object Property: (immediately preceded by) AnnotationAssertion( "X immediately_preceded_by Y iff: end(X) simultaneous_with start(Y).") AnnotationAssertion(Annotation( "SIO:000251") "A non-transitive temporal relation in which one process immediately precedes another process, such that there is no interval of time between the two processes[SIO:000251].") AnnotationAssertion( "RO:0002087") AnnotationAssertion( "directly preceded by") AnnotationAssertion( "is directly preceded by") AnnotationAssertion(Annotation( "SIO:000251") "is immediately preceded by") AnnotationAssertion( "starts_at_end_of") AnnotationAssertion( "uberon") AnnotationAssertion( "immediately_preceded_by") AnnotationAssertion( "immediately_preceded_by") AnnotationAssertion(rdfs:label "immediately preceded by"@en) AnnotationAssertion(rdfs:seeAlso ) SubObjectPropertyOf( ) # Object Property: (overlaps) AnnotationAssertion( "x overlaps y if and only if there exists some z such that x has part z and z part of y") AnnotationAssertion( "BFO_0000051 some (BFO_0000050 some ?Y)") AnnotationAssertion( "RO:0002131") AnnotationAssertion( "uberon") AnnotationAssertion( "overlaps") AnnotationAssertion( "overlaps") AnnotationAssertion(rdfs:label "overlaps"@en) # Object Property: (innervates) AnnotationAssertion( "Relation between a 'neuron projection bundle' and a region in which one or more of its component neuron projections either synapses to targets or receives synaptic input. T innervates some R Expands_to: T has_fasciculating_neuron_projection that synapse_in some R."@en) AnnotationAssertion( "RO:0002134") AnnotationAssertion( "uberon") AnnotationAssertion( "innervates") AnnotationAssertion( "innervates") AnnotationAssertion(rdfs:comment "http://code.google.com/p/obo-relations/issues/detail?id=6") AnnotationAssertion(rdfs:label "innervates"@en) # Object Property: (continuous with) AnnotationAssertion( "X continuous_with Y if and only if X and Y share a fiat boundary.") AnnotationAssertion( "RO:0002150") AnnotationAssertion( "uberon") AnnotationAssertion( "continuous_with") AnnotationAssertion( "continuous_with") AnnotationAssertion(rdfs:label "continuous with"@en) SymmetricObjectProperty() # Object Property: (shares ancestor with) AnnotationAssertion( "two individual entities d1 and d2 stand in a shares_ancestor_with relation if and only if there exists some a such that d1 derived_by_descent_from a and d2 derived_by_descent_from a.") AnnotationAssertion( "RO:0002158") AnnotationAssertion( "uberon") AnnotationAssertion( "homologous_to") AnnotationAssertion( "homologous_to") AnnotationAssertion(rdfs:label "shares ancestor with") SymmetricObjectProperty() TransitiveObjectProperty() # Object Property: (serially homologous to) AnnotationAssertion( "RO:0002159") AnnotationAssertion( "uberon") AnnotationAssertion( "serially_homologous_to") AnnotationAssertion( "serially_homologous_to") AnnotationAssertion(rdfs:label "serially homologous to") SymmetricObjectProperty() TransitiveObjectProperty() # Object Property: (only in taxon) AnnotationAssertion(Annotation( ) "S only_in_taxon T iff: S SubClassOf in_taxon only T.") AnnotationAssertion( "x only in taxon y if and only if x is in taxon y, and there is no other organism z such that y!=z a and x is in taxon z.") AnnotationAssertion( "RO:0002160") AnnotationAssertion( "uberon") AnnotationAssertion( "only_in_taxon") AnnotationAssertion( "only_in_taxon") AnnotationAssertion(rdfs:label "only in taxon") SubObjectPropertyOf( ) # Object Property: (in taxon) AnnotationAssertion( "x is in taxon y if an only if y is an organism, and the relationship between x and y is one of: part of (reflexive), developmentally preceded by, derives from, secreted by, expressed.") AnnotationAssertion( "RO:0002162") AnnotationAssertion( "uberon") AnnotationAssertion( "in_taxon") AnnotationAssertion( "in_taxon") AnnotationAssertion(rdfs:label "in taxon") # Object Property: (connected to) AnnotationAssertion(Annotation( ) "Binary relationship: x connected_to y if and only if there exists some z such that z connects x and y in a ternary connected_to(x,y,z) relationship.") AnnotationAssertion( "a is connected to b if and only if a and b are discrete structure, and there exists some connecting structure c, such that c connects a and b") AnnotationAssertion( "RO:0002170") AnnotationAssertion( "uberon") AnnotationAssertion( "connected_to") AnnotationAssertion( "connected_to") AnnotationAssertion(rdfs:comment "Connection does not imply overlaps.") AnnotationAssertion(rdfs:label "connected to"@en) AnnotationAssertion(rdfs:seeAlso ) SubObjectPropertyOf( ) # Object Property: (connects) AnnotationAssertion(Annotation( ) "Binary relationship: z connects x if and only if there exists some y such that z connects x and y in a ternary connected_to(x,y,z) relationship.") AnnotationAssertion( "c connects a if and only if there exist some b such that a and b are similar parts of the same system, and c connects b, specifically, c connects a with b. When one structure connects two others it unites some aspect of the function or role they play within the system.") AnnotationAssertion( "this is currently used for both structural relationships (such as between a valve and the chamber it connects) and abstract relationships (anatomical lines and the entities they connect)") AnnotationAssertion( "RO:0002176") AnnotationAssertion( "uberon") AnnotationAssertion( "connects") AnnotationAssertion( "connects") AnnotationAssertion(rdfs:label "connects"@en) # Object Property: (attached to part of) AnnotationAssertion( "a is attached to part of b if a is attached to b, or a is attached to some p, where p is part of b.") AnnotationAssertion( "RO:0002177") AnnotationAssertion( "uberon") AnnotationAssertion( "attaches_to_part_of") AnnotationAssertion( "attaches_to_part_of") AnnotationAssertion(rdfs:label "attached to part of"@en) SubObjectPropertyOf( ) # Object Property: (supplies) AnnotationAssertion( "Relation between an arterial structure and another structure, where the arterial structure acts as a conduit channeling fluid, substance or energy.") AnnotationAssertion( "relation between an artery and the structure is supplies with blood.") AnnotationAssertion( "RO:0002178") AnnotationAssertion(Annotation( "FMA:86003") "arterial supply of") AnnotationAssertion( "uberon") AnnotationAssertion( "supplies") AnnotationAssertion( "supplies") AnnotationAssertion(rdfs:comment "source: FMA") AnnotationAssertion(rdfs:label "supplies"@en) AnnotationAssertion(rdfs:seeAlso ) SubObjectPropertyOf( ) ObjectPropertyDomain( ) # Object Property: (drains) AnnotationAssertion( "Relation between an collecting structure and another structure, where the collecting structure acts as a conduit channeling fluid, substance or energy away from the other structure.") AnnotationAssertion( "RO:0002179") AnnotationAssertion( "drains blood from") AnnotationAssertion( "drains from") AnnotationAssertion( "uberon") AnnotationAssertion( "drains") AnnotationAssertion( "drains") AnnotationAssertion(rdfs:comment "source: Wikipedia") AnnotationAssertion(rdfs:label "drains"@en) SubObjectPropertyOf( ) ObjectPropertyDomain( ) # Object Property: (has component) AnnotationAssertion( "w 'has component' p if w 'has part' p and w is such that it can be directly disassembled into into n parts p, p2, p3, ..., pn, where these parts are of similar type.") AnnotationAssertion( "RO:0002180") AnnotationAssertion( "uberon") AnnotationAssertion( "has_component") AnnotationAssertion( "has_component") AnnotationAssertion(rdfs:label "has component"@en) SubObjectPropertyOf( ) # Object Property: (develops from) AnnotationAssertion( ) AnnotationAssertion( "x develops from y if and only if either (a) x directly develops from y or (b) there exists some z such that x directly develops from z and z develops from y") AnnotationAssertion( "Chris Mungall") AnnotationAssertion( "David Osumi-Sutherland") AnnotationAssertion( "Melissa Haendel") AnnotationAssertion( "Terry Meehan") AnnotationAssertion( "RO:0002202") AnnotationAssertion( "uberon") AnnotationAssertion( "develops_from") AnnotationAssertion( "develops_from") AnnotationAssertion(rdfs:comment "This is the transitive form of the develops from relation") AnnotationAssertion(rdfs:label "develops from"@en) SubObjectPropertyOf( ) SubObjectPropertyOf( ) InverseObjectProperties( ) TransitiveObjectProperty() # Object Property: (develops into) AnnotationAssertion( "inverse of develops from") AnnotationAssertion( "RO:0002203") AnnotationAssertion( "uberon") AnnotationAssertion( "develops_into") AnnotationAssertion( "develops_into") AnnotationAssertion(rdfs:label "develops into"@en) SubObjectPropertyOf( ) SubObjectPropertyOf( ) TransitiveObjectProperty() # Object Property: (directly develops from) AnnotationAssertion( "Candidate definition: x directly_develops from y if and only if there exists some developmental process (GO:0032502) p such that x and y both participate in p, and x is the output of p and y is the input of p, and a substantial portion of the matter of x comes from y, and the start of x is coincident with or after the end of y.") AnnotationAssertion( "RO:0002207") AnnotationAssertion( "uberon") AnnotationAssertion( "directly_develops_from") AnnotationAssertion( "directly_develops_from") AnnotationAssertion(rdfs:label "directly develops from"@en) SubObjectPropertyOf( ) # Object Property: (capable of) AnnotationAssertion( "mechanosensory neuron capable of detection of mechanical stimulus involved in sensory perception (GO:0050974)") AnnotationAssertion( "osteoclast SubClassOf 'capable of' some 'bone resorption'") AnnotationAssertion( "A relation between a material entity (such as a cell) and a process, in which the material entity has the ability to carry out the process. ") AnnotationAssertion( "Chris Mungall") AnnotationAssertion( "has function realized in") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "For compatibility with BFO, this relation has a shortcut definition in which the expression \"capable of some P\" expands to \"bearer_of (some realized_by only P)\".") AnnotationAssertion( "RO:0002215") AnnotationAssertion( "protein") AnnotationAssertion( "uberon") AnnotationAssertion( "capable_of") AnnotationAssertion( ) AnnotationAssertion( "false"^^xsd:boolean) AnnotationAssertion( "capable_of") AnnotationAssertion(rdfs:label "capable of"@en) SubObjectPropertyOf( ) SubObjectPropertyOf( ) # Object Property: (capable of part of) AnnotationAssertion( "c stands in this relationship to p if and only if there exists some p' such that c is capable_of p', and p' is part_of p.") AnnotationAssertion( "RO:0002216") AnnotationAssertion( "uberon") AnnotationAssertion( "capable_of_part_of") AnnotationAssertion( "capable_of_part_of") AnnotationAssertion(rdfs:label "capable of part of"@en) SubObjectPropertyOf( ) # Object Property: (surrounded by) AnnotationAssertion( "x surrounded_by y if and only if (1) x is adjacent to y and for every region r that is adjacent to x, r overlaps y (2) the shared boundary between x and y occupies the majority of the outermost boundary of x") AnnotationAssertion(Annotation( ) "x surrounded_by y iff: x is adjacent to y and for every region r adjacent to x, r overlaps y.") AnnotationAssertion( "RO:0002219") AnnotationAssertion( "uberon") AnnotationAssertion( "surrounded_by") AnnotationAssertion( "surrounded_by") AnnotationAssertion(rdfs:label "surrounded by"@en) SubObjectPropertyOf( ) InverseObjectProperties( ) # Object Property: (adjacent to) AnnotationAssertion( "x adjacent to y if and only if x and y share a boundary.") AnnotationAssertion( "x adjacent_to y iff: x and y share a boundary.") AnnotationAssertion( "RO:0002220") AnnotationAssertion( "uberon") AnnotationAssertion( "adjacent_to") AnnotationAssertion( "adjacent_to") AnnotationAssertion(rdfs:label "adjacent to"@en) SymmetricObjectProperty() # Object Property: (surrounds) AnnotationAssertion( "inverse of surrounded by") AnnotationAssertion(Annotation( ) "inverse of surrounded_by.") AnnotationAssertion( "RO:0002221") AnnotationAssertion( "uberon") AnnotationAssertion( "surrounds") AnnotationAssertion( "surrounds") AnnotationAssertion(rdfs:label "surrounds"@en) SubObjectPropertyOf( ) # Object Property: (starts) AnnotationAssertion(Annotation( ) Annotation( "Allen:starts") "Relation between occurrents, shares a start boundary with.") AnnotationAssertion( "inverse of starts with") AnnotationAssertion( "RO:0002223") AnnotationAssertion( "uberon") AnnotationAssertion( "starts") AnnotationAssertion( "starts") AnnotationAssertion(rdfs:label "starts"@en) SubObjectPropertyOf( ) InverseObjectProperties( ) # Object Property: (starts with) AnnotationAssertion( "x starts with y if and only if x has part y and the time point at which x starts is equivalent to the time point at which y starts. Formally: α(y) = α(x) ∧ ω(y) < ω(x), where α is a function that maps a process to a start point, and ω is a function that maps a process to an end point.") AnnotationAssertion( "RO:0002224") AnnotationAssertion( "uberon") AnnotationAssertion( "starts_with") AnnotationAssertion( "starts_with") AnnotationAssertion(rdfs:label "starts with"@en) SubObjectPropertyOf( ) TransitiveObjectProperty() # Object Property: (develops from part of) AnnotationAssertion( "x develops from part of y if and only if there exists some z such that x develops from z and z is part of y") AnnotationAssertion( "RO:0002225") AnnotationAssertion( "uberon") AnnotationAssertion( "develops_from_part_of") AnnotationAssertion( "develops_from_part_of") AnnotationAssertion(rdfs:label "develops from part of"@en) SubObjectPropertyOf( ) # Object Property: (develops in) AnnotationAssertion( "x develops_in y if x is located in y whilst x is developing") AnnotationAssertion( "RO:0002226") AnnotationAssertion( "uberon") AnnotationAssertion( "develops_in") AnnotationAssertion( "develops_in") AnnotationAssertion(rdfs:comment "This relation take from EHDAA2 - precise semantics yet to be defined") AnnotationAssertion(rdfs:label "develops in"@en) SubObjectPropertyOf( ) # Object Property: (ends) AnnotationAssertion(Annotation( ) Annotation( "Allen:starts") Annotation( "ZFS:finishes") "Relation between occurrents, shares an end boundary with.") AnnotationAssertion( "inverse of ends with") AnnotationAssertion( "RO:0002229") AnnotationAssertion( "finishes") AnnotationAssertion( "uberon") AnnotationAssertion( "ends") AnnotationAssertion( "ends") AnnotationAssertion(rdfs:label "ends"@en) SubObjectPropertyOf( ) InverseObjectProperties( ) # Object Property: (ends with) AnnotationAssertion( "x ends with y if and only if x has part y and the time point at which x ends is equivalent to the time point at which y ends. Formally: α(y) > α(x) ∧ ω(y) = ω(x), where α is a function that maps a process to a start point, and ω is a function that maps a process to an end point.") AnnotationAssertion( "RO:0002230") AnnotationAssertion( "uberon") AnnotationAssertion( "ends_with") AnnotationAssertion( "ends_with") AnnotationAssertion(rdfs:label "ends with"@en) SubObjectPropertyOf( ) TransitiveObjectProperty() # Object Property: (has developmental contribution from) AnnotationAssertion( "x has developmental contribution from y iff x has some part z such that z develops from y"@en) AnnotationAssertion( "RO:0002254") AnnotationAssertion( "uberon") AnnotationAssertion( "has_developmental_contribution_from") AnnotationAssertion( "has_developmental_contribution_from") AnnotationAssertion(rdfs:label "has developmental contribution from"@en) SubObjectPropertyOf( ) InverseObjectProperties( ) TransitiveObjectProperty() # Object Property: (developmentally contributes to) AnnotationAssertion( "inverse of has developmental contribution from") AnnotationAssertion( "RO:0002255") AnnotationAssertion( "uberon") AnnotationAssertion( "developmentally_contributes_to") AnnotationAssertion( "developmentally_contributes_to") AnnotationAssertion(rdfs:label "developmentally contributes to"@en) SubObjectPropertyOf( ) # Object Property: (developmentally induced by) AnnotationAssertion(Annotation( "GO:0001759") "t1 developmentally_induced_by t2 if there is a process of organ induction (GO:0001759) with t1 and t2 as interacting participants. t2 causes t1 to change its fate from a precursor tissue type T to T', where T' develops_from T.") AnnotationAssertion( "t1 induced_by t2 if there is a process of developmental induction (GO:0031128) with t1 and t2 as interacting participants. t2 causes t1 to change its fate from a precursor anatomical structure type T to T', where T' develops_from T") AnnotationAssertion( "RO:0002256") AnnotationAssertion( "uberon") AnnotationAssertion( "developmentally_induced_by") AnnotationAssertion( "developmentally_induced_by") AnnotationAssertion(rdfs:comment "sources for developmentally_induced_by relationships in Uberon: Developmental Biology, Gilbert, 8th edition, figure 6.5(F)") AnnotationAssertion(rdfs:label "developmentally induced by"@en) SubObjectPropertyOf( ) # Object Property: (developmentally preceded by) AnnotationAssertion( "Candidate definition: x developmentally related to y if and only if there exists some developmental process (GO:0032502) p such that x and y both participates in p, and x is the output of p and y is the input of p") AnnotationAssertion( "RO:0002258") AnnotationAssertion( "uberon") AnnotationAssertion( "developmentally_preceded_by") AnnotationAssertion( "developmentally_preceded_by") AnnotationAssertion(rdfs:label "developmentally preceded by"@en) # Object Property: (developmentally replaces) AnnotationAssertion( "x developmentally replaces y if and only if there is some developmental process that causes x to move or to cease to exist, and for the site that was occupied by x to become occupied by y, where y either comes into existence in this site or moves to this site from somewhere else") AnnotationAssertion( "RO:0002285") AnnotationAssertion( "uberon") AnnotationAssertion( "developmentally_replaces") AnnotationAssertion( "developmentally_replaces") AnnotationAssertion(rdfs:label "developmentally replaces"@en) SubObjectPropertyOf( ) # Object Property: (confers advantage in) AnnotationAssertion( "RO:0002322") AnnotationAssertion( "adapted_for") AnnotationAssertion( "uberon") AnnotationAssertion( "confers_advantage_in") AnnotationAssertion( "confers_advantage_in") AnnotationAssertion(rdfs:label "confers advantage in"@en) # Object Property: (functionally related to) AnnotationAssertion( "A grouping relationship for any relationship directly involving a function, or that holds because of a function of one of the related entities.") AnnotationAssertion( "RO:0002328") AnnotationAssertion( "uberon") AnnotationAssertion( "functionally_related_to") AnnotationAssertion( "functionally_related_to") AnnotationAssertion(rdfs:label "functionally related to"@en) # Object Property: (part of structure that is capable of) AnnotationAssertion( "this relation holds between c and p when c is part of some c', and c' is capable of p.") AnnotationAssertion( "RO:0002329") AnnotationAssertion( "uberon") AnnotationAssertion( "part_of_structure_that_is_capable_of") AnnotationAssertion( "part_of_structure_that_is_capable_of") AnnotationAssertion(rdfs:label "part of structure that is capable of"@en) SubObjectPropertyOf( ) # Object Property: (member of) AnnotationAssertion( "is member of is a mereological relation between a item and a collection.") AnnotationAssertion( "RO:0002350") AnnotationAssertion( "uberon") AnnotationAssertion( "member_of") AnnotationAssertion( "member_of") AnnotationAssertion(rdfs:label "member of"@en) SubObjectPropertyOf( ) InverseObjectProperties( ) # Object Property: (has member) AnnotationAssertion( "has member is a mereological relation between a collection and an item.") AnnotationAssertion( "RO:0002351") AnnotationAssertion( "uberon") AnnotationAssertion( "has_member") AnnotationAssertion( "has_member") AnnotationAssertion(rdfs:label "has member"@en) SubObjectPropertyOf( ) IrreflexiveObjectProperty() # Object Property: (input of) AnnotationAssertion( "inverse of has input") AnnotationAssertion( "RO:0002352") AnnotationAssertion( "uberon") AnnotationAssertion( "input_of") AnnotationAssertion( "input_of") AnnotationAssertion(rdfs:label "input of"@en) SubObjectPropertyOf( ) SubObjectPropertyOf( ) # Object Property: (output of) AnnotationAssertion( "inverse of has output") AnnotationAssertion( "RO:0002353") AnnotationAssertion( "uberon") AnnotationAssertion( "output_of") AnnotationAssertion( "output_of") AnnotationAssertion(rdfs:label "output of"@en) SubObjectPropertyOf( ) SubObjectPropertyOf( ) # Object Property: (attached to) AnnotationAssertion( "a is attached to b if and only if a and b are discrete objects or object parts, and there are physical connections between a and b such that a force pulling a will move b, or a force pulling b will move a") AnnotationAssertion( "RO:0002371") AnnotationAssertion( "uberon") AnnotationAssertion( "attaches_to") AnnotationAssertion( "attaches_to") AnnotationAssertion(rdfs:label "attached to"@en) AnnotationAssertion(rdfs:seeAlso ) SubObjectPropertyOf( ) SubObjectPropertyOf( ) SubObjectPropertyOf( ) SymmetricObjectProperty() # Object Property: (has muscle origin) AnnotationAssertion( "m has_muscle_origin s iff m is attached_to s, and it is the case that when m contracts, s does not move. The site of the origin tends to be more proximal and have greater mass than what the other end attaches to."@en) AnnotationAssertion(Annotation( ) "m has_muscle_origin s iff m is attaches_to s, and it is the case that when m contracts, s does not move. The site of the origin tends to be more proximal and have greater mass than what the other end attaches to.") AnnotationAssertion( "RO:0002372") AnnotationAssertion( "uberon") AnnotationAssertion( "has_muscle_origin") AnnotationAssertion( "has_muscle_origin") AnnotationAssertion(rdfs:comment "The origin is the end of a muscle that attaches to the more fixed part of the skeleton, which is the proximal end in limb muscles") AnnotationAssertion(rdfs:label "has muscle origin"@en) AnnotationAssertion(rdfs:seeAlso ) SubObjectPropertyOf( ) SubObjectPropertyOf( ) # Object Property: (has muscle insertion) AnnotationAssertion(Annotation( ) "m has_muscle_insertion s iff m is attaches_to s, and it is the case that when m contracts, s moves. Insertions are usually connections of muscle via tendon to bone.") AnnotationAssertion( "m has_muscle_insertion s iff m is attaches_to s, and it is the case that when m contracts, s moves. Insertions are usually connections of muscle via tendon to bone."@en) AnnotationAssertion( "RO:0002373") AnnotationAssertion( "uberon") AnnotationAssertion( "has_muscle_insertion") AnnotationAssertion( "has_muscle_insertion") AnnotationAssertion(rdfs:comment "The insertion is the point of attachment of a muscle that moves the most when the muscle shortens, or the most distal end of limb muscles") AnnotationAssertion(rdfs:label "has muscle insertion"@en) AnnotationAssertion(rdfs:seeAlso ) SubObjectPropertyOf( ) SubObjectPropertyOf( ) # Object Property: (derived from ancestral fusion of) AnnotationAssertion( "x has_fused_element y iff: there exists some z : x has_part z, z homologous_to y, and y is a distinct element, the boundary between x and z is largely fiat"@en) AnnotationAssertion( "x has_fused_element y iff: there exists some z : x has_part z, z homologous_to y, and y is a distinct element, the boundary between x and z is largely fiat.") AnnotationAssertion( "RO:0002374") AnnotationAssertion( "uberon") AnnotationAssertion( "has_fused_element") AnnotationAssertion( "has_fused_element") AnnotationAssertion(rdfs:comment "A single bone in one species may correspond to the fusion of two or more bones found as distinct elements in another. For example, tibiofibula has_fused_element tibia. A has_fused_element B does not imply that A has_part some B, rather than A has_part some B', where B' is not a subtype of B (because B is a distinct element but B' is a regional part) but has some evolutionary relationship to B.") AnnotationAssertion(rdfs:label "derived from ancestral fusion of"@en) # Object Property: (tributary of) AnnotationAssertion( "x tributary_of y if and only if x a channel for the flow of a substance into y, where y is larger than x. If x and y are hydrographic features, then y is the main stem of a river, or a lake or bay, but not the sea or ocean. If x and y are anatomical, then y is a vein.") AnnotationAssertion( "RO:0002376") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "dbpowl:drainsTo") "drains into") AnnotationAssertion( "tributary_of") AnnotationAssertion( "tributary_of") AnnotationAssertion(rdfs:label "tributary of"@en) SubObjectPropertyOf( ) # Object Property: (branching part of) AnnotationAssertion( "x is a branching part of y if and only if x is part of y and x is connected directly or indirectly to the main stem of y") AnnotationAssertion( "we need to check if FMA branch_of implies part_of. the relation we intend to use here should - for example, see vestibulocochlear nerve") AnnotationAssertion( "RO:0002380") AnnotationAssertion( "uberon") AnnotationAssertion( "branching_part_of") AnnotationAssertion( "branching_part_of") AnnotationAssertion(rdfs:label "branching part of"@en) AnnotationAssertion(rdfs:seeAlso ) SubObjectPropertyOf( ) InverseObjectProperties( ) # Object Property: (has potential to developmentally contribute to) AnnotationAssertion( "x has potential to developmentrally contribute to y iff x developmentally contributes to y or x is capable of developmentally contributing to y"@en) AnnotationAssertion( "x has potential to developmentrally contribute to y iff x developmentally contributes to y or x is capable of developmentally contributing to y.") AnnotationAssertion( "RO:0002385") AnnotationAssertion( "uberon") AnnotationAssertion( "has_potential_to_developmentally_contribute_to") AnnotationAssertion( "has_potential_to_developmentally_contribute_to") AnnotationAssertion(rdfs:label "has potential to developmentally contribute to"@en) # Object Property: (has potential to develop into) AnnotationAssertion( "x has the potential to develop into y iff x develops into y or if x is capable of developing into y"@en) AnnotationAssertion( "x has the potential to develop into y iff x develops into y or if x is capable of developing into y.") AnnotationAssertion( "RO:0002387") AnnotationAssertion( "uberon") AnnotationAssertion( "has_potential_to_develop_into") AnnotationAssertion( "has_potential_to_develop_into") AnnotationAssertion(rdfs:label "has potential to develop into"@en) # Object Property: (has potential to directly develop into) AnnotationAssertion( "x has potential to directly develop into y iff x directly develops into y or x is capable of directly developing into y"@en) AnnotationAssertion( "x has potential to directly develop into y iff x directly develops into y or x is capable of directly developing into y.") AnnotationAssertion( "RO:0002388") AnnotationAssertion( "uberon") AnnotationAssertion( "has_potential_to_directly_develop_into") AnnotationAssertion( "has_potential_to_directly_develop_into") AnnotationAssertion(rdfs:label "has potential to directly develop into"@en) SubObjectPropertyOf( ) # Object Property: (contributes to morphology of) AnnotationAssertion( "p contributes to morphology of w if and only if a change in the morphology of p entails a change in the morphology of w. Examples: every skull contributes to morphology of the head which it is a part of. Counter-example: nuclei do not generally contribute to the morphology of the cell they are part of, as they are buffered by cytoplasm.") AnnotationAssertion( "RO:0002433") AnnotationAssertion( "uberon") AnnotationAssertion( "contributes_to_morphology_of") AnnotationAssertion( "contributes_to_morphology_of") AnnotationAssertion(rdfs:label "contributes to morphology of") SubObjectPropertyOf( ) # Object Property: (composed primarily of) AnnotationAssertion( "x composed_primarily_of y if and only if more than half of the mass of x is made from y or units of the same type as y.") AnnotationAssertion( "x composed_primarily_of y iff: more than half of the mass of x is made from parts of y.") AnnotationAssertion( "RO:0002473") AnnotationAssertion( "uberon") AnnotationAssertion( "composed_primarily_of") AnnotationAssertion( "composed_primarily_of") AnnotationAssertion(rdfs:label "composed primarily of") SubObjectPropertyOf( ) # Object Property: (child nucleus of) AnnotationAssertion( "c is a child nucleus of d if and only if c and d are both nuclei and parts of cells c' and d', where c' is derived from d' by mitosis and the genetic material in c is a copy of the generic material in d") AnnotationAssertion( "RO:0002476") AnnotationAssertion( "uberon") AnnotationAssertion( "child_nucleus_of") AnnotationAssertion( "child_nucleus_of") AnnotationAssertion(rdfs:label "child nucleus of") SubObjectPropertyOf( ) # Object Property: (child nucleus of in hermaphrodite) AnnotationAssertion( "A child nucleus relationship in which the cells are part of a hermaphroditic organism") AnnotationAssertion( "RO:0002477") AnnotationAssertion( "uberon") AnnotationAssertion( "child_nucleus_of_in_hermaphrodite") AnnotationAssertion( "child_nucleus_of_in_hermaphrodite") AnnotationAssertion(rdfs:label "child nucleus of in hermaphrodite") SubObjectPropertyOf( ) # Object Property: (child nucleus of in male) AnnotationAssertion( "A child nucleus relationship in which the cells are part of a male organism") AnnotationAssertion( "RO:0002478") AnnotationAssertion( "uberon") AnnotationAssertion( "child_nucleus_of_in_male") AnnotationAssertion( "child_nucleus_of_in_male") AnnotationAssertion(rdfs:label "child nucleus of in male") SubObjectPropertyOf( ) # Object Property: (existence starts during) AnnotationAssertion(Annotation( ) "Relation between continuant c and occurrent s, such that every instance of c comes into existing during some s.") AnnotationAssertion( "x existence starts during y if and only if the time point at which x starts is after or equivalent to the time point at which y starts and before or equivalent to the time point at which y ends. Formally: x existence starts during y iff α(x) >= α(y) & α(x) <= ω(y).") AnnotationAssertion( "RO:0002488") AnnotationAssertion( "begins_to_exist_during") AnnotationAssertion( "uberon") AnnotationAssertion( "existence_starts_during") AnnotationAssertion( "existence_starts_during") AnnotationAssertion(rdfs:label "existence starts during") SubObjectPropertyOf( ) # Object Property: (existence starts with) AnnotationAssertion(Annotation( ) "Relation between continuant and occurrent, such that c comes into existence at the start of p.") AnnotationAssertion( "x starts ends with y if and only if the time point at which x starts is equivalent to the time point at which y starts. Formally: x existence starts with y iff α(x) = α(y).") AnnotationAssertion( "RO:0002489") AnnotationAssertion( "uberon") AnnotationAssertion( "existence_starts_with") AnnotationAssertion( "existence_starts_with") AnnotationAssertion(rdfs:label "existence starts with") SubObjectPropertyOf( ) # Object Property: (existence starts and ends during) AnnotationAssertion( "x exists during y if and only if: 1) the time point at which x begins to exist is after or equal to the time point at which y begins and 2) the time point at which x ceases to exist is before or equal to the point at which y ends. Formally: x existence starts and ends during y iff α(x) >= α(y) & α(x) <= ω(y) & ω(x) <= ω(y) & ω(x) >= α(y)") AnnotationAssertion( "RO:0002491") AnnotationAssertion( "uberon") AnnotationAssertion( "existence_starts_and_ends_during") AnnotationAssertion( "existence_starts_and_ends_during") AnnotationAssertion(rdfs:label "existence starts and ends during") SubObjectPropertyOf( ) SubObjectPropertyOf( ) # Object Property: (existence ends during) AnnotationAssertion(Annotation( ) "Relation between continuant c and occurrent s, such that every instance of c ceases to exist during some s, if it does not die prematurely.") AnnotationAssertion( "x existence ends during y if and only if the time point at which x ends is before or equivalent to the time point at which y ends and after or equivalent to the point at which y starts. Formally: x existence ends during y iff ω(x) <= ω(y) and ω(x) >= α(y).") AnnotationAssertion( "RO:0002492") AnnotationAssertion( "ceases_to_exist_during") AnnotationAssertion( "uberon") AnnotationAssertion( "existence_ends_during") AnnotationAssertion( "existence_ends_during") AnnotationAssertion(rdfs:label "existence ends during") SubObjectPropertyOf( ) # Object Property: (existence ends with) AnnotationAssertion(Annotation( ) "Relation between continuant and occurrent, such that c ceases to exist at the end of p.") AnnotationAssertion( "x existence ends with y if and only if the time point at which x ends is equivalent to the time point at which y ends. Formally: x existence ends with y iff ω(x) = ω(y).") AnnotationAssertion( "RO:0002493") AnnotationAssertion( "uberon") AnnotationAssertion( "existence_ends_with") AnnotationAssertion( "existence_ends_with") AnnotationAssertion(rdfs:label "existence ends with") SubObjectPropertyOf( ) # Object Property: (transformation of) AnnotationAssertion( "x transformation of y if x is the immediate transformation of y, or is linked to y through a chain of transformation relationships") AnnotationAssertion( "RO:0002494") AnnotationAssertion(Annotation( "SIO:000657") "transforms from") AnnotationAssertion( "uberon") AnnotationAssertion( "transformation_of") AnnotationAssertion( "transformation_of") AnnotationAssertion(rdfs:label "transformation of") AnnotationAssertion(rdfs:seeAlso ) SubObjectPropertyOf( ) TransitiveObjectProperty() # Object Property: (immediate transformation of) AnnotationAssertion( "x immediate transformation of y iff x immediately succeeds y temporally at a time boundary t, and all of the matter present in x at t is present in y at t, and all the matter in y at t is present in x at t") AnnotationAssertion( "RO:0002495") AnnotationAssertion(Annotation( ) "direct_transformation_of") AnnotationAssertion(Annotation( "SIO:000658") "immediately transforms from") AnnotationAssertion( "uberon") AnnotationAssertion( "immediate_transformation_of") AnnotationAssertion( "immediate_transformation_of") AnnotationAssertion(rdfs:label "immediate transformation of") AnnotationAssertion(rdfs:seeAlso ) SubObjectPropertyOf( ) SubObjectPropertyOf( ) # Object Property: (existence starts during or after) AnnotationAssertion( "x existence starts during or after y if and only if the time point at which x starts is after or equivalent to the time point at which y starts. Formally: x existence starts during or after y iff α (x) >= α (y).") AnnotationAssertion( "RO:0002496") AnnotationAssertion( "uberon") AnnotationAssertion( "existence_starts_during_or_after") AnnotationAssertion( "existence_starts_during_or_after") AnnotationAssertion(rdfs:label "existence starts during or after") # Object Property: (existence ends during or before) AnnotationAssertion( "x existence ends during or before y if and only if the time point at which x ends is before or equivalent to the time point at which y ends.") AnnotationAssertion( "RO:0002497") AnnotationAssertion( "uberon") AnnotationAssertion( "existence_ends_during_or_before") AnnotationAssertion( "existence_ends_during_or_before") AnnotationAssertion(rdfs:label "existence ends during or before") # Object Property: (has skeleton) AnnotationAssertion( "A relation between a segment or subdivision of an organism and the maximal subdivision of material entities that provides structural support for that segment or subdivision.") AnnotationAssertion(Annotation( ) "A relation between a subdivision of an organism and the single subdivision of skeleton that provides structural support for that subdivision.") AnnotationAssertion( "RO:0002551") AnnotationAssertion( "uberon") AnnotationAssertion( "has sekeletal support") AnnotationAssertion( "has supporting framework") AnnotationAssertion( "has_skeleton") AnnotationAssertion( "has_skeleton") AnnotationAssertion(rdfs:label "has skeleton") SubObjectPropertyOf( ) InverseObjectProperties( ) AsymmetricObjectProperty() IrreflexiveObjectProperty() ObjectPropertyDomain( ) ObjectPropertyRange( ) # Object Property: (has muscle antagonist) AnnotationAssertion(Annotation( ) "m1 has_muscle_antagonist m2 iff m1 acts in opposition to m2, and m2 is responsible for returning the structure to its initial position.") AnnotationAssertion( "m1 has_muscle_antagonist m2 iff m1 has_muscle_insertion s, m2 has_muscle_insection s, m1 acts in opposition to m2, and m2 is responsible for returning the structure to its initial position.") AnnotationAssertion( "RO:0002568") AnnotationAssertion( "uberon") AnnotationAssertion( "has_muscle_antagonist") AnnotationAssertion( "has_muscle_antagonist") AnnotationAssertion(rdfs:label "has muscle antagonist") AnnotationAssertion(rdfs:seeAlso ) SubObjectPropertyOf( ) # Object Property: (has branching part) AnnotationAssertion( "inverse of branching part of") AnnotationAssertion( "RO:0002569") AnnotationAssertion( "uberon") AnnotationAssertion( "has_branching_part") AnnotationAssertion( "has_branching_part") AnnotationAssertion(rdfs:label "has branching part") SubObjectPropertyOf( ) TransitiveObjectProperty() # Object Property: (lumen of) AnnotationAssertion( "x lumen_of y iff x is the space or substance that is part of y and does not cross any of the inner membranes or boundaries of y that is maximal with respect to the volume of the convex hull.") AnnotationAssertion( "RO:0002571") AnnotationAssertion( "uberon") AnnotationAssertion( "lumen_of") AnnotationAssertion( "lumen_of") AnnotationAssertion(rdfs:label "lumen of") SubObjectPropertyOf( ) # Object Property: (luminal space of) AnnotationAssertion( "s is luminal space of x iff s is lumen_of x and s is an immaterial entity") AnnotationAssertion( "RO:0002572") AnnotationAssertion( "uberon") AnnotationAssertion( "luminal_space_of") AnnotationAssertion( "luminal_space_of") AnnotationAssertion(rdfs:label "luminal space of") SubObjectPropertyOf( ) SubObjectPropertyOf( ) # Object Property: (skeleton of) AnnotationAssertion( "inverse of has skeleton") AnnotationAssertion( "RO:0002576") AnnotationAssertion( "uberon") AnnotationAssertion( "skeleton_of") AnnotationAssertion( "skeleton_of") AnnotationAssertion(rdfs:label "skeleton of") SubObjectPropertyOf( ) # Object Property: (produces) AnnotationAssertion( "a produces b if some process that occurs_in a has_output b, where a and b are material entities. Examples: hybridoma cell line produces monoclonal antibody reagent; chondroblast produces avascular GAG-rich matrix.") AnnotationAssertion( "RO:0003000") AnnotationAssertion( "uberon") AnnotationAssertion( "produces") AnnotationAssertion( "produces") AnnotationAssertion(rdfs:label "produces"@en) InverseObjectProperties( ) # Object Property: (produced by) AnnotationAssertion( "a produced_by b iff some process that occurs_in b has_output a.") AnnotationAssertion( "RO:0003001") AnnotationAssertion( "uberon") AnnotationAssertion( "produced_by") AnnotationAssertion( "produced_by") AnnotationAssertion(rdfs:label "produced by"@en) # Object Property: (anastomoses with) AnnotationAssertion( "uberon") AnnotationAssertion( "anastomoses_with") AnnotationAssertion(rdfs:label "anastomoses with") # Object Property: (anteriorly connected to) AnnotationAssertion(Annotation( ) "x anteriorly_connected_to y iff the anterior part of x is connected to y. i.e. x connected_to y and x posterior_to y.") AnnotationAssertion( "uberon") AnnotationAssertion( "anteriorly_connected_to") AnnotationAssertion(rdfs:label "anteriorly connected to") SubObjectPropertyOf( ) SubObjectPropertyOf( ) SubObjectPropertyOf( ) # Object Property: (channel for) AnnotationAssertion( "carries") AnnotationAssertion( "uberon") AnnotationAssertion( "channel_for") AnnotationAssertion(rdfs:label "channel for") ObjectPropertyDomain( ) ObjectPropertyRange( ) # Object Property: (channels_from) AnnotationAssertion( "uberon") AnnotationAssertion( "channels_from") AnnotationAssertion(rdfs:label "channels_from") TransitiveObjectProperty() # Object Property: (channels_into) AnnotationAssertion( "uberon") AnnotationAssertion( "channels_into") AnnotationAssertion(rdfs:label "channels_into") TransitiveObjectProperty() # Object Property: (conduit for) AnnotationAssertion( "x is a conduit for y iff y passes through the lumen of x.") AnnotationAssertion( "uberon") AnnotationAssertion( "conduit_for") AnnotationAssertion(rdfs:label "conduit for") # Object Property: (distally connected to) AnnotationAssertion(Annotation( ) "x distally_connected_to y iff the distal part of x is connected to y. i.e. x connected_to y and x proximal_to y.") AnnotationAssertion( "uberon") AnnotationAssertion( "distally_connected_to") AnnotationAssertion(rdfs:label "distally connected to") SubObjectPropertyOf( ) SubObjectPropertyOf( ) SubObjectPropertyOf( ) InverseObjectProperties( ) # Object Property: (extends_fibers_into) AnnotationAssertion( "uberon") AnnotationAssertion( "extends_fibers_into") AnnotationAssertion(rdfs:label "extends_fibers_into") SubObjectPropertyOf( ) SymmetricObjectProperty() # Object Property: (filtered through) AnnotationAssertion( "Relationship between a fluid and a material entity, where the fluid is the output of a realization of a filtration role that inheres in the material entity.") AnnotationAssertion( "uberon") AnnotationAssertion( "filtered_through") AnnotationAssertion(rdfs:comment "Relationship between a fluid and a filtration barrier, where the portion of fluid arises as a transformation of another portion of fluid on the other side of the barrier, with larger particles removed") AnnotationAssertion(rdfs:label "filtered through") # Object Property: (has_start) AnnotationAssertion( "uberon") AnnotationAssertion( "has_start") AnnotationAssertion(rdfs:label "has_start") # Object Property: (in_central_side_of) AnnotationAssertion(Annotation( "BSPO:cjm"^^xsd:string) "X in_central_side Y <=> if Y is subdivided into left and right portions around some median divisor, all parts of X are closer to the median divisor than the outermost lateral sides.") AnnotationAssertion( "uberon") AnnotationAssertion( "in_central_side_of") AnnotationAssertion(rdfs:label "in_central_side_of") AnnotationAssertion(rdfs:seeAlso ) AnnotationAssertion(rdfs:seeAlso "https://github.com/obophenotype/uberon/wiki/Modeling-paired-structures-Design-Pattern"^^xsd:anyURI) SubObjectPropertyOf( ) # Object Property: (in_innermost_side_of) AnnotationAssertion( "uberon") AnnotationAssertion( "in_innermost_side_of") AnnotationAssertion(rdfs:label "in_innermost_side_of") SubObjectPropertyOf( ) # Object Property: (in_outermost_side_of) AnnotationAssertion( "uberon") AnnotationAssertion( "in_outermost_side_of") AnnotationAssertion(rdfs:label "in_outermost_side_of") SubObjectPropertyOf( ) # Object Property: (indirectly_supplies) AnnotationAssertion( "a indirectly_supplies s iff a has a branch and the branch supplies or indirectly supplies s.") AnnotationAssertion( "add to RO") AnnotationAssertion( "uberon") AnnotationAssertion( "indirectly_supplies") AnnotationAssertion(rdfs:label "indirectly_supplies") TransitiveObjectProperty() # Object Property: (layer part of) AnnotationAssertion( "uberon") AnnotationAssertion( "layer_part_of") AnnotationAssertion(rdfs:label "layer part of") SubObjectPropertyOf( ) # Object Property: (posteriorly connected to) AnnotationAssertion(Annotation( ) "x posteriorly_connected_to y iff the posterior part of x is connected to y. i.e. x connected_to y and x anterior_to y.") AnnotationAssertion( "uberon") AnnotationAssertion( "posteriorly_connected_to") AnnotationAssertion(rdfs:label "posteriorly connected to") SubObjectPropertyOf( ) SubObjectPropertyOf( ) # Object Property: (protects) AnnotationAssertion( "uberon") AnnotationAssertion( "protects") AnnotationAssertion(rdfs:label "protects") # Object Property: (proximally connected to) AnnotationAssertion(Annotation( ) "x proximally_connected_to y iff the proximal part of x is connected to y. i.e. x connected_to y and x distal_to y.") AnnotationAssertion( "uberon") AnnotationAssertion( "proximally_connected_to") AnnotationAssertion(rdfs:label "proximally connected to") SubObjectPropertyOf( ) SubObjectPropertyOf( ) SubObjectPropertyOf( ) # Object Property: (sexually_homologous_to) AnnotationAssertion( "uberon") AnnotationAssertion( "sexually_homologous_to") AnnotationAssertion(rdfs:label "sexually_homologous_to") SubObjectPropertyOf( ) # Object Property: (site_of) AnnotationAssertion( "c site_of p if c is the bearer of a disposition that is realized by a process that has p as part.") AnnotationAssertion( "uberon") AnnotationAssertion( "capable_of_has_part") AnnotationAssertion( "site_of") AnnotationAssertion(rdfs:label "site_of") # Object Property: (subdivision of) AnnotationAssertion( "uberon") AnnotationAssertion( "subdivision_of") AnnotationAssertion(rdfs:comment "placeholder relation. X = 'subdivision of A' and subdivision_of some B means that X is the mereological sum of A and B") AnnotationAssertion(rdfs:label "subdivision of") # Object Property: (synapsed by) AnnotationAssertion( "Relation between an anatomical structure (including cells) and a neuron that chemically synapses to it.") AnnotationAssertion( "uberon") AnnotationAssertion( "synapsed_by") AnnotationAssertion(rdfs:label "synapsed by") # Object Property: (transitively anteriorly connected to) AnnotationAssertion(Annotation( ) ".") AnnotationAssertion( "uberon") AnnotationAssertion( "transitively_anteriorly_connected_to") AnnotationAssertion(rdfs:label "transitively anteriorly connected to") TransitiveObjectProperty() # Object Property: (transitively_connected to) AnnotationAssertion( "uberon") AnnotationAssertion( "transitively_connected_to") AnnotationAssertion(rdfs:label "transitively_connected to") TransitiveObjectProperty() # Object Property: (transitively distally connected to) AnnotationAssertion(Annotation( ) ".") AnnotationAssertion( "uberon") AnnotationAssertion( "transitively_distally_connected_to") AnnotationAssertion(rdfs:label "transitively distally connected to") TransitiveObjectProperty() # Object Property: (transitively proximally connected to) AnnotationAssertion(Annotation( ) ".") AnnotationAssertion( "uberon") AnnotationAssertion( "transitively_proximally_connected_to") AnnotationAssertion(rdfs:label "transitively proximally connected to") TransitiveObjectProperty() # Object Property: (trunk_part_of) AnnotationAssertion( "uberon") AnnotationAssertion( "trunk_part_of") AnnotationAssertion(rdfs:label "trunk_part_of") SubObjectPropertyOf( ) ############################ # Classes ############################ # Class: (cell) AnnotationAssertion( "A material entity of anatomical origin (part of or deriving from an organism) that has as its parts a maximally connected cell compartment surrounded by a plasma membrane.") AnnotationAssertion( ) AnnotationAssertion( "CALOHA:TS-2035") AnnotationAssertion( "FMA:68646") AnnotationAssertion( "GO:0005623") AnnotationAssertion( "KUPO:0000002") AnnotationAssertion( "VHOG:0001533") AnnotationAssertion( "WBbt:0004017") AnnotationAssertion( "XAO:0003012") AnnotationAssertion( "cell") AnnotationAssertion( "CL:0000000") AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "The definition of cell is intended to represent all cells, and thus a cell is defined as a material entity and not an anatomical structure, which implies that it is part of an organism (or the entirety of one).") AnnotationAssertion(rdfs:label "cell") AnnotationAssertion(rdfs:label "cell"@en) # Class: (migratory cranial neural crest cell) AnnotationAssertion( "Cell that is part of the migratory cranial neural crest population. Migratory cranial neural crest cells develop from premigratory cranial neural crest cells and have undergone epithelial to mesenchymal transition and delamination.") AnnotationAssertion( "cell") AnnotationAssertion( "CL:0000008") AnnotationAssertion(rdfs:label "migratory cranial neural crest cell") SubClassOf( ) # Class: (migratory trunk neural crest cell) AnnotationAssertion( "Cell that is part of the migratory trunk neural crest population. Migratory trunk neural crest cells develop from premigratory trunk neural crest cells and have undergone epithelial to mesenchymal transition and delamination.") AnnotationAssertion( "cell") AnnotationAssertion( "CL:0000011") AnnotationAssertion(rdfs:label "migratory trunk neural crest cell") SubClassOf( ) # Class: (sperm) AnnotationAssertion( "A mature male germ cell that develops from a spermatid.") AnnotationAssertion( "BTO:0001277") AnnotationAssertion( "BTO:0002046") AnnotationAssertion( "CALOHA:TS-0949") AnnotationAssertion( "FBbt:00004954") AnnotationAssertion( "FMA:67338") AnnotationAssertion( "WBbt:0006798") AnnotationAssertion( "sperm cell") AnnotationAssertion( "spermatozoid") AnnotationAssertion( "spermatozoon") AnnotationAssertion( "cell") AnnotationAssertion( "CL:0000019") AnnotationAssertion(rdfs:label "sperm") SubClassOf( ) # Class: (spermatogonium) AnnotationAssertion( "An euploid male germ cell of an early stage of spermatogenesis.") AnnotationAssertion( "BTO:0000958") AnnotationAssertion( "CALOHA:TS-2193") AnnotationAssertion( "EMAPA:31482") AnnotationAssertion( "FBbt:00004935") AnnotationAssertion( "FMA:72291") AnnotationAssertion( "spermatogonial cell") AnnotationAssertion( "cell") AnnotationAssertion( "CL:0000020") AnnotationAssertion(rdfs:label "spermatogonium") SubClassOf( ) # Class: (oocyte) AnnotationAssertion( "A female germ cell that has entered meiosis.") AnnotationAssertion( "BTO:0000964") AnnotationAssertion( "CALOHA:TS-0711") AnnotationAssertion( "FBbt:00004886") AnnotationAssertion( "FMA:18644") AnnotationAssertion( "WBbt:0006797") AnnotationAssertion( "cell") AnnotationAssertion( "oogonium") AnnotationAssertion( "CL:0000023") AnnotationAssertion(rdfs:label "oocyte") SubClassOf( ) # Class: (egg cell) AnnotationAssertion( "A female gamete where meiosis has progressed to metaphase II and is able to participate in fertilization.") AnnotationAssertion( "BTO:0000369") AnnotationAssertion( "BTO:0003801") AnnotationAssertion( "CALOHA:TS-2191") AnnotationAssertion( "FBbt:00057012") AnnotationAssertion( "FMA:67343") AnnotationAssertion( "MA:0000388") AnnotationAssertion( "mature oocyte") AnnotationAssertion( "ovum") AnnotationAssertion( "cell") AnnotationAssertion( "CL:0000025") AnnotationAssertion(rdfs:label "egg cell") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (neuroblast (sensu Vertebrata)) AnnotationAssertion( "A cell that will develop into a neuron often after a migration phase.") AnnotationAssertion( "CL:0000337") AnnotationAssertion( "BTO:0000930") AnnotationAssertion( "FMA:70563") AnnotationAssertion( "neuroblast") AnnotationAssertion( "cell") AnnotationAssertion( "CL:0000031") AnnotationAssertion(rdfs:label "neuroblast (sensu Vertebrata)") SubClassOf( ) # Class: (fibroblast) AnnotationAssertion( "A connective tissue cell which secretes an extracellular matrix rich in collagen and other macromolecules. Flattened and irregular in outline with branching processes; appear fusiform or spindle-shaped.") AnnotationAssertion( "BTO:0000452") AnnotationAssertion( "CALOHA:TS-0362") AnnotationAssertion( "FMA:63877") AnnotationAssertion( "VHOG:0001482") AnnotationAssertion( "cell") AnnotationAssertion( "CL:0000057") AnnotationAssertion(rdfs:comment "These cells may be vimentin-positive, fibronectin-positive, fsp1-positive, MMP-1-positive, collagen I-positive, collagen III-positive, and alpha-SMA-negative.") AnnotationAssertion(rdfs:label "fibroblast") SubClassOf( ) # Class: (ameloblast) AnnotationAssertion( "Skeletogenic cell that produces enamel, overlies the odontogenic papilla, and arises from the differentiation of a preameloblast cell.") AnnotationAssertion( "CL:0000053") AnnotationAssertion( "CL:0000139") AnnotationAssertion( "BTO:0001663") AnnotationAssertion( "FMA:70576") AnnotationAssertion( "amelocyte") AnnotationAssertion( "enamel secreting cell") AnnotationAssertion( "cell") AnnotationAssertion( "CL:0000059") AnnotationAssertion(rdfs:comment "non-encoded relationship from VSAO produces VSAO:0000066") AnnotationAssertion(rdfs:label "ameloblast") SubClassOf( ) SubClassOf( ) SubClassOf( ) # Class: (odontoblast) AnnotationAssertion( "Skeletogenic cell that secretes dentine matrix, is derived from the odontogenic papilla, and develops from a preodontoblast cell.") AnnotationAssertion( "BTO:0001769") AnnotationAssertion( "CALOHA:TS-0696") AnnotationAssertion( "FMA:62999") AnnotationAssertion( "cell") AnnotationAssertion( "CL:0000060") AnnotationAssertion(rdfs:comment "legacy def: One of the cells forming the outer surface of dental pulp that produces tooth dentin.") AnnotationAssertion(rdfs:label "odontoblast") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (osteoblast) AnnotationAssertion( "Skeletogenic cell that secretes osteoid, is capable of producing mineralized (hydroxyapatite) matrix, is located adjacent to or within osteoid tissue, and arises from the transformation of a preosteoblast cell.") AnnotationAssertion( "BTO:0001593") AnnotationAssertion( "CALOHA:TS-0720") AnnotationAssertion( "FMA:66780") AnnotationAssertion( "cell") AnnotationAssertion( "CL:0000062") AnnotationAssertion(rdfs:comment "non-encoded relationships from VSAO - capable_of_producing VSAO:0000020") AnnotationAssertion(rdfs:label "osteoblast") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (ependymal cell) AnnotationAssertion( "A neurectoderm derived cell that lines the neural lumen.") AnnotationAssertion( "BTO:0001724") AnnotationAssertion( "FMA:70550") AnnotationAssertion( "ependymocyte") AnnotationAssertion( "cell") AnnotationAssertion( "CL:0000065") AnnotationAssertion(rdfs:label "ependymal cell") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (epithelial cell) AnnotationAssertion( "A cell that is usually found in a two-dimensional sheet with a free surface. The cell has a cytoskeleton that allows for tight cell to cell contact and for cell polarity where apical part is directed towards the lumen and the basal part to the basal lamina.") AnnotationAssertion( "BTO:0000414") AnnotationAssertion( "CALOHA:TS-2026") AnnotationAssertion( "CARO:0000077") AnnotationAssertion( "FBbt:00000124") AnnotationAssertion( "FMA:66768") AnnotationAssertion( "WBbt:0003672") AnnotationAssertion( "epitheliocyte") AnnotationAssertion( "cell") AnnotationAssertion( "CL:0000066") AnnotationAssertion(rdfs:label "epithelial cell") SubClassOf( ) DisjointClasses( ) # Class: (ciliated epithelial cell) AnnotationAssertion( "An epithelial cell that has a cilia.") AnnotationAssertion( "FMA:70605") AnnotationAssertion( "cell") AnnotationAssertion( "CL:0000067") AnnotationAssertion(rdfs:label "ciliated epithelial cell") SubClassOf( ) # Class: (blood vessel endothelial cell) AnnotationAssertion( "An endothelial cell that lines the vasculature.") AnnotationAssertion( "cuboidal endothelial cell of vascular tree") AnnotationAssertion( "cell") AnnotationAssertion( "CL:0000071") AnnotationAssertion(rdfs:label "blood vessel endothelial cell") SubClassOf( ) SubClassOf( ) # Class: (columnar/cuboidal epithelial cell) AnnotationAssertion( "A columnar/cuboidal epithelial cell is a cell usually found in a two dimensional sheet with a free surface. Columnar/cuboidal epithelial cells take on the shape of a column or cube.") AnnotationAssertion( "cell") AnnotationAssertion( "CL:0000075") AnnotationAssertion(rdfs:label "columnar/cuboidal epithelial cell") SubClassOf( ) # Class: (squamous epithelial cell) AnnotationAssertion( "CALOHA:TS-1249") AnnotationAssertion( "cell") AnnotationAssertion( "CL:0000076") AnnotationAssertion(rdfs:label "squamous epithelial cell") SubClassOf( ) # Class: (mesothelial cell) AnnotationAssertion( "A flattened epithelial cell of mesenchymal origin that lines the serous cavity.") AnnotationAssertion( "FMA:66773") AnnotationAssertion( "mesotheliocyte") AnnotationAssertion( "cell") AnnotationAssertion( "CL:0000077") AnnotationAssertion(rdfs:label "mesothelial cell") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (T cell) AnnotationAssertion( "A type of lymphocyte whose defining characteristic is the expression of a T cell receptor complex.") AnnotationAssertion( "CL:0000804") AnnotationAssertion( "CL:0000812") AnnotationAssertion( "BTO:0000782") AnnotationAssertion( "CALOHA:TS-1001") AnnotationAssertion( "FMA:62870") AnnotationAssertion( "VHOG:0001479") AnnotationAssertion( "T lymphocyte") AnnotationAssertion( "T-cell") AnnotationAssertion( "T-lymphocyte") AnnotationAssertion( "cell") AnnotationAssertion( "immature T cell") AnnotationAssertion( "mature T cell") AnnotationAssertion( "CL:0000084") AnnotationAssertion(rdfs:label "T cell") SubClassOf( ) # Class: (sensory epithelial cell) AnnotationAssertion( "A specialized epithelial cell involved in sensory perception. Restricted to special sense organs of the olfactory, gustatory, and vestibulocochlear receptor systems; contain sensory cells surrounded by supportive, non-receptive cells.") AnnotationAssertion( "neuroepithelial cell") AnnotationAssertion( "BTO:0004301") AnnotationAssertion( "cell") AnnotationAssertion( "CL:0000098") AnnotationAssertion(rdfs:comment "The term \"neuroepithelial cell\" is used to describe both this cell type and neurecto-epithelial cell (CL:0000710).") AnnotationAssertion(rdfs:label "sensory epithelial cell") SubClassOf( ) SubClassOf( ) # Class: (interneuron) AnnotationAssertion( "Most generally any neuron which is not motor or sensory. Interneurons may also refer to neurons whose axons remain within a particular brain region as contrasted with projection neurons which have axons projecting to other brain regions.") AnnotationAssertion( "BTO:0003811") AnnotationAssertion( "FBbt:00005125") AnnotationAssertion( "FMA:67313") AnnotationAssertion( "WBbt:0005113") AnnotationAssertion( "cell") AnnotationAssertion( "CL:0000099") AnnotationAssertion(rdfs:label "interneuron") SubClassOf( ) # Class: (motor neuron) AnnotationAssertion( "An efferent neuron that passes from the central nervous system or a ganglion toward or to a muscle and conducts an impulse that causes or inhibits movement.") AnnotationAssertion( "BTO:0000312") AnnotationAssertion( "FMA:83617") AnnotationAssertion( "WBbt:0005409") AnnotationAssertion( "motoneuron") AnnotationAssertion( "cell") AnnotationAssertion( "CL:0000100") AnnotationAssertion(rdfs:label "motor neuron") SubClassOf( ) # Class: (sensory neuron) AnnotationAssertion( "Any neuron having a sensory function; an afferent neuron conveying sensory impulses.") AnnotationAssertion( "BTO:0001037") AnnotationAssertion( "FBbt:00005124") AnnotationAssertion( "FMA:84649") AnnotationAssertion( "WBbt:0005759") AnnotationAssertion( "cell") AnnotationAssertion( "CL:0000101") AnnotationAssertion(rdfs:label "sensory neuron") SubClassOf( ) # Class: (cholinergic neuron) AnnotationAssertion( "A neuron that uses acetylcholine as a vesicular neurotransmitter.") AnnotationAssertion( "BTO:0004902") AnnotationAssertion( "FMA:84796") AnnotationAssertion( "WBbt:0006840") AnnotationAssertion( "cell") AnnotationAssertion( "CL:0000108") AnnotationAssertion(rdfs:label "cholinergic neuron") SubClassOf( ) SubClassOf( ) # Class: (endothelial cell) AnnotationAssertion( "An endothelial cell comprises the outermost layer or lining of anatomical structures and can be squamous or cuboidal. In mammals, endothelial cell has vimentin filaments and is derived from the mesoderm.") AnnotationAssertion( "BTO:0001176") AnnotationAssertion( "CALOHA:TS-0278") AnnotationAssertion( "FMA:66772") AnnotationAssertion( "endotheliocyte") AnnotationAssertion( "cell") AnnotationAssertion( "CL:0000115") AnnotationAssertion(rdfs:comment "From FMA: 9.07.2001: Endothelial cell has always been classified as a kind of epithelial cell, specifically a squamous cell but that is not true. First, endothelial cell can either be squamous or cuboidal (e.g. high-endothelial cell) and secondly, it has different embryological derivation (mesodermal) than a true epithelial cell (ectodermal and endodermal). The basis for present classification is the fact that it comprises the outermost layer or lining of anatomical structures (location-based) but a better structural basis for the differentia is the cytoskeleton of the cell. Endothelial cell has vimentin filaments while an epithelial cell has keratin filaments. [Onard].") AnnotationAssertion(rdfs:label "endothelial cell") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (basket cell) AnnotationAssertion( "Basket cells are inhibitory GABAergic interneurons of the brain. In general, dendrites of basket cells are free branching and contain smooth spines. Axons are highly branched. The branched axonal arborizations give rise to basket-like structures that surround the soma of the target cell. Basket cells form axo-somatic synapses, meaning their synapses target somas of other cells.") AnnotationAssertion( "https://orcid.org/0000-0002-2825-0621") AnnotationAssertion( "cell") AnnotationAssertion( "CL:0000118") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "basket cell") SubClassOf( ) SubClassOf( ) # Class: (cerebellar Golgi cell) AnnotationAssertion( "Large intrinsic neuron located in the granule layer of the cerebellar cortex that extends its dendrites into the molecular layer where they receive contact from parallel fibers. The axon of the Golgi cell ramifies densely in the granule layer and enters into a complex arrangement with mossy fiber terminals and granule cell dendrites to form the cerebellar glomerulus. Llinas, Walton and Lang. In The Synaptic Organization of the Brain. 5th ed. 2004.") AnnotationAssertion( "Golgi cell") AnnotationAssertion( "Golgi neuron") AnnotationAssertion( "cerebellar Golgi neuron") AnnotationAssertion( "cerebellum Golgi cell") AnnotationAssertion( "cell") AnnotationAssertion( "CL:0000119") AnnotationAssertion(rdfs:label "cerebellar Golgi cell") SubClassOf( ) SubClassOf( ) # Class: (granule cell) AnnotationAssertion( "BTO:0003393") AnnotationAssertion( "cell") AnnotationAssertion( "CL:0000120") AnnotationAssertion(rdfs:label "granule cell") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (Purkinje cell) AnnotationAssertion( "The output neuron of the cerebellar cortex.") AnnotationAssertion( "BTO:0001011") AnnotationAssertion( "CALOHA:TS-0845") AnnotationAssertion( "FMA:67969") AnnotationAssertion( "Purkinje neuron") AnnotationAssertion( "Purkinje's cell") AnnotationAssertion( "cerebellar Purkinje cell") AnnotationAssertion( "cerebellum Purkinje cell") AnnotationAssertion( "cell") AnnotationAssertion( "CL:0000121") AnnotationAssertion(rdfs:label "Purkinje cell") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (stellate neuron) AnnotationAssertion( "A neuron that has dendritic processes radiating from the cell body forming a star-like shape.") AnnotationAssertion( "BTO:0002316") AnnotationAssertion( "cell") AnnotationAssertion( "CL:0000122") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "stellate neuron") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (glial cell) AnnotationAssertion( "A non-neuronal cell of the nervous system. They not only provide physical support, but also respond to injury, regulate the ionic and chemical composition of the extracellular milieu. Guide neuronal migration during development, and exchange metabolites with neurons.") AnnotationAssertion( "BTO:0002606") AnnotationAssertion( "CALOHA:TS-0415") AnnotationAssertion( "FMA:54536") AnnotationAssertion( "neuroglial cell") AnnotationAssertion( "cell") AnnotationAssertion( "neuroglia") AnnotationAssertion( "CL:0000125") AnnotationAssertion(rdfs:label "glial cell") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (astrocyte) AnnotationAssertion( "A class of large neuroglial (macroglial) cells in the central nervous system - the largest and most numerous neuroglial cells in the brain and spinal cord. Astrocytes (from 'star' cells) are irregularly shaped with many long processes, including those with 'end feet' which form the glial (limiting) membrane and directly and indirectly contribute to the blood-brain barrier. They regulate the extracellular ionic and chemical environment, and 'reactive astrocytes' (along with microglia) respond to injury.") AnnotationAssertion( "BTO:0000099") AnnotationAssertion( "CALOHA:TS-0060") AnnotationAssertion( "FMA:54537") AnnotationAssertion( "astrocytic glia") AnnotationAssertion( "cell") AnnotationAssertion( "CL:0000127") AnnotationAssertion(rdfs:comment "Astrocytes are reportedly CD68-negative, CD121a-positive, CD184-positive, CD192-positive, CRF-positive, EGFR-positive, GFAP-positive, GLUT1-positive, MBP-negative, and NGFR-positive.") AnnotationAssertion(rdfs:label "astrocyte") SubClassOf( ) # Class: (neurectodermal cell) AnnotationAssertion( "Ectoderm destined to be nervous tissue.") AnnotationAssertion( "neurectoderm cell") AnnotationAssertion( "cell") AnnotationAssertion( "CL:0000133") AnnotationAssertion(rdfs:label "neurectodermal cell") SubClassOf( ) # Class: (fat cell) AnnotationAssertion( "A fat-storing cell found mostly in the abdominal cavity and subcutaneous tissue of mammals. Fat is usually stored in the form of triglycerides.") AnnotationAssertion( "CL:0000450") AnnotationAssertion( "BTO:0000443") AnnotationAssertion( "CALOHA:TS-0012") AnnotationAssertion( "FMA:63880") AnnotationAssertion( "adipocyte") AnnotationAssertion( "adipose cell") AnnotationAssertion( "cell") AnnotationAssertion( "CL:0000136") AnnotationAssertion(rdfs:label "fat cell") SubClassOf( ) # Class: (osteocyte) AnnotationAssertion( "A mature osteoblast that has become embedded in the bone matrix. They occupy a small cavity, called lacuna, in the matrix and are connected to adjacent osteocytes via protoplasmic projections called canaliculi.") AnnotationAssertion( "bone cell") AnnotationAssertion( "BTO:0002038") AnnotationAssertion( "CALOHA:TS-1167") AnnotationAssertion( "FMA:66779") AnnotationAssertion( "VSAO:0000124") AnnotationAssertion( "cell") AnnotationAssertion( "CL:0000137") AnnotationAssertion(rdfs:comment "VSAO relationship simplified OBO_REL:integral_part_of VSAO:0000118") AnnotationAssertion(rdfs:label "osteocyte") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (chondrocyte) AnnotationAssertion( "Skeletogenic cell that is terminally differentiated, secretes an avascular, GAG-rich matrix, is embedded in cartilage tissue matrix, retains the ability to divide, and develops from a chondroblast cell.") AnnotationAssertion( "BTO:0000249") AnnotationAssertion( "CALOHA:TS-0138") AnnotationAssertion( "FMA:66782") AnnotationAssertion( "cartilage cell") AnnotationAssertion( "cell") AnnotationAssertion( "CL:0000138") AnnotationAssertion(rdfs:label "chondrocyte") SubClassOf( ) # Class: (melanocyte) AnnotationAssertion( "A pigment cell derived from the neural crest. Contains melanin-filled pigment granules, which gives a brown to black appearance.") AnnotationAssertion( "CL:0000572") AnnotationAssertion( "BTO:0000847") AnnotationAssertion( "CALOHA:TS-0613") AnnotationAssertion( "FMA:70545") AnnotationAssertion( "VHOG:0001679") AnnotationAssertion( "melanophore") AnnotationAssertion( "cell") AnnotationAssertion( "CL:0000148") AnnotationAssertion(rdfs:label "melanocyte") SubClassOf( ) # Class: (visual pigment cell) AnnotationAssertion( "pigment cell") AnnotationAssertion( "cell") AnnotationAssertion( "CL:0000149") AnnotationAssertion(rdfs:label "visual pigment cell") SubClassOf( ) # Class: (glandular epithelial cell) AnnotationAssertion( "A specialized epithelial cell that is capable of synthesizing and secreting certain biomolecules.") AnnotationAssertion( "CALOHA:TS-2085") AnnotationAssertion( "FMA:86494") AnnotationAssertion( "cell") AnnotationAssertion( "CL:0000150") AnnotationAssertion(rdfs:label "glandular epithelial cell") SubClassOf( ) SubClassOf( ) # Class: (secretory cell) AnnotationAssertion( "A cell that specializes in controlled release of one or more substances.") AnnotationAssertion( "BTO:0003659") AnnotationAssertion( "FMA:86916") AnnotationAssertion( "cell") AnnotationAssertion( "CL:0000151") AnnotationAssertion(rdfs:label "secretory cell") SubClassOf( ) # Class: (peptic cell) AnnotationAssertion( "A cell that is usually basal in position, cuboidal with round nucleus, short microvilli, secretes pepsinogen.") AnnotationAssertion( "FMA:62902") AnnotationAssertion( "chief cell of stomach") AnnotationAssertion( "gastric chief cell") AnnotationAssertion( "pepsinogen secreting cell") AnnotationAssertion( "zymogenic cell") AnnotationAssertion( "cell") AnnotationAssertion( "CL:0000155") AnnotationAssertion(rdfs:label "peptic cell") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (club cell) AnnotationAssertion( "Epithelial progenitor cell of the lung. Club cells are dome-shaped with short microvilli but no cilia. They function to protect the bronchiolar epithelium. Club cells also multiply and differentiate into ciliated cells to regenerate the bronchiolar epithelium.") AnnotationAssertion( "BTO:0004811") AnnotationAssertion( "FMA:14119") AnnotationAssertion( "Clara cell") AnnotationAssertion( "bronchiolar non-ciliated cell") AnnotationAssertion( "club cell of bronchiole") AnnotationAssertion( "cell") AnnotationAssertion( "CL:0000158") AnnotationAssertion(rdfs:label "club cell") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (seromucus secreting cell) AnnotationAssertion( "cell") AnnotationAssertion( "CL:0000159") AnnotationAssertion(rdfs:label "seromucus secreting cell") SubClassOf( ) # Class: (goblet cell) AnnotationAssertion( "A cell of the epithelial lining that produce and secrete mucins.") AnnotationAssertion( ) AnnotationAssertion( "BTO:0001540") AnnotationAssertion( "FMA:13148") AnnotationAssertion( "chalice cell") AnnotationAssertion( "cell") AnnotationAssertion( "CL:0000160") AnnotationAssertion(rdfs:label "goblet cell") SubClassOf( ) SubClassOf( ) # Class: (parietal cell) AnnotationAssertion( "A large, oval stomach epithelial cell with a central nucleus; source of gastric acid. Secretes HCl.") AnnotationAssertion( "BTO:0001780") AnnotationAssertion( "FMA:62901") AnnotationAssertion( "oxyntic cell") AnnotationAssertion( "cell") AnnotationAssertion( "CL:0000162") AnnotationAssertion(rdfs:label "parietal cell") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (enteroendocrine cell) AnnotationAssertion( "An endocrine cell that is located in the epithelium of the gastrointestinal tract or in the pancreas.") AnnotationAssertion( "BTO:0003865") AnnotationAssertion( "FMA:62930") AnnotationAssertion( "cell") AnnotationAssertion( "CL:0000164") AnnotationAssertion(rdfs:label "enteroendocrine cell") SubClassOf( ) # Class: (neuroendocrine cell) AnnotationAssertion( "An endocrine cell that has the specialized function to produce and secrete hormones in response to neuronal signals.") AnnotationAssertion( "BTO:0002691") AnnotationAssertion( "FMA:83810") AnnotationAssertion( "neurosecretory cell") AnnotationAssertion( "cell") AnnotationAssertion( "CL:0000165") AnnotationAssertion(rdfs:label "neuroendocrine cell") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (chromaffin cell) AnnotationAssertion( "A cell that stores epinephrine secretory vesicles. During times of stress, the nervous system signals the vesicles to secrete their hormonal content. Their name derives from their ability to stain a brownish color with chromic salts. Characteristically, they are located in the adrenal medulla and paraganglia of the sympathetic nervous system.") AnnotationAssertion( "BTO:0000259") AnnotationAssertion( "FMA:69263") AnnotationAssertion( "phaeochromocyte") AnnotationAssertion( "cell") AnnotationAssertion( "CL:0000166") AnnotationAssertion(rdfs:label "chromaffin cell") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (insulin secreting cell) AnnotationAssertion( "BTO:0000783") AnnotationAssertion( "cell") AnnotationAssertion( "CL:0000168") AnnotationAssertion(rdfs:label "insulin secreting cell") SubClassOf( ) # Class: (somatostatin secreting cell) AnnotationAssertion( "cell") AnnotationAssertion( "CL:0000172") AnnotationAssertion(rdfs:label "somatostatin secreting cell") SubClassOf( ) # Class: (luteal cell) AnnotationAssertion( "A progesterone secreting cell in the corpus luteum. The large luteal cells develop from the granulosa cells. The small luteal cells develop from the theca cells.") AnnotationAssertion( "BTO:0003939") AnnotationAssertion( "FMA:18688") AnnotationAssertion( "lutein cell") AnnotationAssertion( "cell") AnnotationAssertion( "CL:0000175") AnnotationAssertion(rdfs:label "luteal cell") SubClassOf( ) SubClassOf( ) # Class: (Leydig cell) AnnotationAssertion( "A Leydig cell is a testosterone-secreting cell in the interstitial area, between the seminiferous tubules, in the testis.") AnnotationAssertion( "interstitial cell") AnnotationAssertion( "BTO:0000755") AnnotationAssertion( "CALOHA:TS-1150") AnnotationAssertion( "EMAPA:29655") AnnotationAssertion( "FMA:72297") AnnotationAssertion( "interstitial cell of Leydig") AnnotationAssertion( "cell") AnnotationAssertion( "CL:0000178") AnnotationAssertion(rdfs:comment "Note that the Amphibian Anatomy Ontology (AA) has a class 'leydig cells' but this is unrelated") AnnotationAssertion(rdfs:label "Leydig cell") SubClassOf( ) # Class: (hepatocyte) AnnotationAssertion( "The main structural component of the liver. They are specialized epithelial cells that are organized into interconnected plates called lobules. Majority of cell population of liver, polygonal in shape, arranged in plates or trabeculae between sinusoids; may have single nucleus or binucleated.") AnnotationAssertion( "BTO:0000575") AnnotationAssertion( "CALOHA:TS-0454") AnnotationAssertion( "FMA:14515") AnnotationAssertion( "cell") AnnotationAssertion( "CL:0000182") AnnotationAssertion(rdfs:comment "Hepatocytes are reportedly MHC Class I-positive and MHC Class II-positive.") AnnotationAssertion(rdfs:label "hepatocyte") SubClassOf( ) # Class: (myoepithelial cell) AnnotationAssertion( "Contractile cells resembling smooth muscle cells that are present in glands, notably the mammary gland, and aid in secretion. This cell has long weaving dendritic processes containing myofilament.") AnnotationAssertion( "BTO:0002309") AnnotationAssertion( "CALOHA:TS-2379") AnnotationAssertion( "FMA:67799") AnnotationAssertion( "basket epithelial cell") AnnotationAssertion( "myoepitheliocyte") AnnotationAssertion( "cell") AnnotationAssertion( "CL:0000185") AnnotationAssertion(rdfs:label "myoepithelial cell") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (muscle cell) AnnotationAssertion( "A mature contractile cell, commonly known as a myocyte. This cell has as part of its cytoplasm myofibrils organized in various patterns.") AnnotationAssertion( "BTO:0000888") AnnotationAssertion( "BTO:0000902") AnnotationAssertion( "CALOHA:TS-2032") AnnotationAssertion( "FBbt:00005074") AnnotationAssertion( "FMA:67328") AnnotationAssertion( "WBbt:0003675") AnnotationAssertion( "muscle fiber") AnnotationAssertion( "myocyte") AnnotationAssertion( "cell") AnnotationAssertion( "CL:0000187") AnnotationAssertion(rdfs:label "muscle cell") SubClassOf( ) # Class: (cell of skeletal muscle) AnnotationAssertion( "A somatic cell located in skeletal muscle.") AnnotationAssertion( "BTO:0004392") AnnotationAssertion( "CALOHA:TS-2158") AnnotationAssertion( "FMA:9727") AnnotationAssertion( "skeletal muscle cell") AnnotationAssertion( "cell") AnnotationAssertion( "CL:0000188") AnnotationAssertion(rdfs:label "cell of skeletal muscle") SubClassOf( ) # Class: (slow muscle cell) AnnotationAssertion( "A muscle cell that develops tension more slowly than a fast-twitch fiber.") AnnotationAssertion( "FMA:84448") AnnotationAssertion( "cell") AnnotationAssertion( "slow muscle fiber") AnnotationAssertion( "CL:0000189") AnnotationAssertion(rdfs:label "slow muscle cell") SubClassOf( ) # Class: (fast muscle cell) AnnotationAssertion( "A muscle cell that can develop high tension rapidly. It is usually innervated by a single alpha neuron .") AnnotationAssertion( "glycolytic muscle fiber") AnnotationAssertion( "cell") AnnotationAssertion( "CL:0000190") AnnotationAssertion(rdfs:label "fast muscle cell") SubClassOf( ) # Class: (smooth muscle cell) AnnotationAssertion( "A non-striated, elongated, spindle-shaped cell found lining the digestive tract, uterus, and blood vessels. They develop from specialized myoblasts (smooth muscle myoblast).") AnnotationAssertion( "CL:0000191") AnnotationAssertion( "BTO:0004576") AnnotationAssertion( "CALOHA:TS-2159") AnnotationAssertion( "FMA:14072") AnnotationAssertion( "SMCs") AnnotationAssertion( "myocytes, smooth muscle") AnnotationAssertion( "smooth muscle fiber") AnnotationAssertion( "non-striated muscle cell") AnnotationAssertion( "cell") AnnotationAssertion( "CL:0000192") AnnotationAssertion(rdfs:label "smooth muscle cell") SubClassOf( ) # Class: (sensory receptor cell) AnnotationAssertion( "A cell that is capable of detection of a stimulus involved in sensory perception.") AnnotationAssertion( "receptor cell") AnnotationAssertion( "cell") AnnotationAssertion( "CL:0000197") AnnotationAssertion(rdfs:label "sensory receptor cell") SubClassOf( ) # Class: (auditory hair cell) AnnotationAssertion( "A mechanoreceptor cell of the auditory or vestibular system that is sensitive to auditory stimuli. The accessory sensory structures are arranged so that appropriate stimuli cause movement of the hair-like projections (stereocilia and kinocilia) which relay the information centrally in the nervous system.") AnnotationAssertion( "CL:0000201") AnnotationAssertion( "FMA:62364") AnnotationAssertion( "cell") AnnotationAssertion( "auditory receptor cell") AnnotationAssertion( "CL:0000202") AnnotationAssertion(rdfs:comment "In mammals these cells are located in the organ of Corti.") AnnotationAssertion(rdfs:label "auditory hair cell") SubClassOf( ) # Class: (chemoreceptor cell) AnnotationAssertion( "A cell specialized to detect chemical substances and relay that information centrally in the nervous system. Chemoreceptors may monitor external stimuli, as in taste and olfaction, or internal stimuli, such as the concentrations of oxygen and carbon dioxide in the blood.") AnnotationAssertion( "cell") AnnotationAssertion( "CL:0000206") AnnotationAssertion(rdfs:label "chemoreceptor cell") SubClassOf( ) # Class: (olfactory receptor cell) AnnotationAssertion( ) AnnotationAssertion( "BTO:0004185") AnnotationAssertion( "FMA:67860") AnnotationAssertion( "Schultze's cell") AnnotationAssertion( "odorant receptor cell") AnnotationAssertion( "olfactory receptor neuron") AnnotationAssertion( "olfactory sensory neuron") AnnotationAssertion( "cell") AnnotationAssertion( "CL:0000207") AnnotationAssertion(rdfs:label "olfactory receptor cell") SubClassOf( ) SubClassOf( ) # Class: (taste receptor cell) AnnotationAssertion( "A cell type found in the spherical or ovoid clusters of receptor cells found mainly in the epithelium of the tongue and constituting the end organs of the sense of taste.") AnnotationAssertion( "FMA:67910") AnnotationAssertion( "taste bud cell") AnnotationAssertion( "cell") AnnotationAssertion( "CL:0000209") AnnotationAssertion(rdfs:label "taste receptor cell") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (photoreceptor cell) AnnotationAssertion( "A cell specialized to detect and transduce light.") AnnotationAssertion( "BTO:0001060") AnnotationAssertion( "CALOHA:TS-0868") AnnotationAssertion( "FBbt:00004211") AnnotationAssertion( "FMA:86740") AnnotationAssertion( "cell") AnnotationAssertion( "CL:0000210") AnnotationAssertion(rdfs:label "photoreceptor cell") SubClassOf( ) SubClassOf( ) # Class: (synovial cell) AnnotationAssertion( "A meso-epithelial cell that lies between the cartilaginous fibers in the synovial membrane of a joint and produces hyaluronic acid.") AnnotationAssertion( "BTO:0003652") AnnotationAssertion( "CALOHA:TS-0995") AnnotationAssertion( "FMA:66786") AnnotationAssertion( "synoviocyte") AnnotationAssertion( "hyaluronic acid secreting cell") AnnotationAssertion( "cell") AnnotationAssertion( "CL:0000214") AnnotationAssertion(rdfs:label "synovial cell") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (Sertoli cell) AnnotationAssertion( "A supporting cell projecting inward from the basement membrane of seminiferous tubules. They surround and nourish the developing male germ cells and secrete androgen binding protein. Their tight junctions with the spermatogonia and spermatocytes provide a blood-testis barrier.") AnnotationAssertion( "BTO:0001238") AnnotationAssertion( "CALOHA:TS-0922") AnnotationAssertion( "FMA:72298") AnnotationAssertion( "VHOG:0001348") AnnotationAssertion( "cell") AnnotationAssertion( "CL:0000216") AnnotationAssertion(rdfs:label "Sertoli cell") SubClassOf( ) SubClassOf( ) # Class: (ectodermal cell) AnnotationAssertion( "A cell of the outer of the three germ layers of the embryo.") AnnotationAssertion( "FMA:72549") AnnotationAssertion( "ectoderm cell") AnnotationAssertion( "cell") AnnotationAssertion( "CL:0000221") AnnotationAssertion(rdfs:label "ectodermal cell") SubClassOf( ) # Class: (mesodermal cell) AnnotationAssertion( "A cell of the middle germ layer of the embryo.") AnnotationAssertion( "FMA:72554") AnnotationAssertion( "mesoblast") AnnotationAssertion( "mesoderm cell") AnnotationAssertion( "cell") AnnotationAssertion( "CL:0000222") AnnotationAssertion(rdfs:label "mesodermal cell") SubClassOf( ) # Class: (endodermal cell) AnnotationAssertion( "A cell of the inner of the three germ layers of the embryo.") AnnotationAssertion( "FMA:72555") AnnotationAssertion( "endoderm cell") AnnotationAssertion( "cell") AnnotationAssertion( "CL:0000223") AnnotationAssertion(rdfs:label "endodermal cell") SubClassOf( ) # Class: (multinucleate cell) AnnotationAssertion( "A cell with more than one nucleus.") AnnotationAssertion( "AEO:0000203") AnnotationAssertion( "WBbt:0008074") AnnotationAssertion( "syncitium") AnnotationAssertion( "syncytial cell") AnnotationAssertion( "syncytium") AnnotationAssertion( "cell") AnnotationAssertion( "CL:0000228") AnnotationAssertion(rdfs:label "multinucleate cell") SubClassOf( ) # Class: (erythrocyte) AnnotationAssertion( "A red blood cell. In mammals, mature erythrocytes are biconcave disks containing hemoglobin whose function is to transport oxygen.") AnnotationAssertion( "BTO:0000424") AnnotationAssertion( "CALOHA:TS-0290") AnnotationAssertion( "FMA:81100") AnnotationAssertion( "RBC") AnnotationAssertion( "red blood cell") AnnotationAssertion( "cell") AnnotationAssertion( "CL:0000232") AnnotationAssertion(rdfs:label "erythrocyte") SubClassOf( ) # Class: (platelet) AnnotationAssertion( "A non-nucleated disk-shaped cell formed by extrusion from megakaryocytes, found in the blood of all mammals, and mainly involved in blood coagulation.") AnnotationAssertion( "BTO:0000132") AnnotationAssertion( "CALOHA:TS-0803") AnnotationAssertion( "FMA:62851") AnnotationAssertion( "anucleate thrombocyte") AnnotationAssertion( "blood platelet") AnnotationAssertion( "enucleate thrombocyte") AnnotationAssertion( "cell") AnnotationAssertion( "CL:0000233") AnnotationAssertion(rdfs:comment "Platelets are reportedly CCR1-positive, CCR2-negative, CCR3-positive, CCR4-positive, CCR5-negative, CCR6-negative, CCR7-negative, CCR8-negative, CCR9-negative, CCR10-negative, CD16-positive, CD23-positive, CD32-positive, CD40-positive, CD41-positive CD42-positive, CD61-positive, CD62P-positive, CD64-positive, CD89-positive, CD102-positive, CD147-positive (activated platelets), CD154-positive (activated platelets), CD162-positive, CD209, CD282-positive, CD284-positive, CD289-positive, CD181-negative, CD182-negative, CD183-negative, CD184-positive, CLEC2-positive, GPVI-positive, JAMC-positive, PAR1-positive, PAR2-negative, PAR3-positive, PAR4-positive, TSP1-positive, and TXA2R-positive. Platelets can reportedly produce CCL2, CCL3, CCL5, CCL7, CCL17, CD40L, CXCL1, CXCL4, CXCL4L1, CXCL5, CXCL7, CXCL8, CXCL12, EGF, factor V, factor VII, factor XI, factor XIII, bFGF, histamine, IGF-1, IL-1beta, PAI-1, PDGF, plasminogen, protein S, serotonin, TGF-beta, TFPI, VEGF, and vWF.") AnnotationAssertion(rdfs:label "platelet") SubClassOf( ) SubClassOf( ) # Class: (phagocyte) AnnotationAssertion( "Any cell capable of ingesting particulate matter via phagocytosis.") AnnotationAssertion( "BTO:0001044") AnnotationAssertion( "FMA:83806") AnnotationAssertion( "cell") AnnotationAssertion( "CL:0000234") AnnotationAssertion(rdfs:label "phagocyte") SubClassOf( ) # Class: (macrophage) AnnotationAssertion( "A mononuclear phagocyte present in variety of tissues, typically differentiated from monocytes, capable of phagocytosing a variety of extracellular particulate material, including immune complexes, microorganisms, and dead cells.") AnnotationAssertion( "BTO:0000801") AnnotationAssertion( "CALOHA:TS-0587") AnnotationAssertion( "FMA:63261") AnnotationAssertion( "FMA:83585") AnnotationAssertion( "histiocyte") AnnotationAssertion( "cell") AnnotationAssertion( "CL:0000235") AnnotationAssertion(rdfs:comment "Morphology: Diameter 30_M-80 _M, abundant cytoplasm, low N/C ratio, eccentric nucleus. Irregular shape with pseudopods, highly adhesive. Contain vacuoles and phagosomes, may contain azurophilic granules; markers: Mouse & Human: CD68, in most cases CD11b. Mouse: in most cases F4/80+; role or process: immune, antigen presentation, & tissue remodelling; lineage: hematopoietic, myeloid.") AnnotationAssertion(rdfs:label "macrophage") SubClassOf( ) SubClassOf( ) # Class: (B cell) AnnotationAssertion( "A lymphocyte of B lineage that is capable of B cell mediated immunity.") AnnotationAssertion( "BTO:0000776") AnnotationAssertion( "CALOHA:TS-0068") AnnotationAssertion( "FMA:62869") AnnotationAssertion( "VHOG:0001480") AnnotationAssertion( "B lymphocyte") AnnotationAssertion( "B-cell") AnnotationAssertion( "B-lymphocyte") AnnotationAssertion( "cell") AnnotationAssertion( "CL:0000236") AnnotationAssertion(rdfs:label "B cell") SubClassOf( ) # Class: (Merkel cell) AnnotationAssertion( "A modified epidermal cell located in the stratum basale. They are found mostly in areas where sensory perception is acute. Merkel cells are closely associated with an expanded terminal bulb of an afferent myelinated nerve fiber.") AnnotationAssertion( "FMA:70548") AnnotationAssertion( "Merkel's cell") AnnotationAssertion( "cell") AnnotationAssertion( "CL:0000242") AnnotationAssertion(rdfs:label "Merkel cell") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (eye photoreceptor cell) AnnotationAssertion( "cell") AnnotationAssertion( "CL:0000287") AnnotationAssertion(rdfs:label "eye photoreceptor cell") SubClassOf( ) # Class: (somatotropin secreting cell) AnnotationAssertion( "A peptide hormone secreting cell that produces growth hormone, somatotropin.") AnnotationAssertion( "CL:0000471") AnnotationAssertion( "growth hormone secreting cell") AnnotationAssertion( "somatotrophin secreting cell") AnnotationAssertion( "cell") AnnotationAssertion( "CL:0000295") AnnotationAssertion(rdfs:label "somatotropin secreting cell") SubClassOf( ) # Class: (keratinocyte) AnnotationAssertion( "An epidermal cell which synthesizes keratin and undergoes a characteristic change as it moves upward from the basal layers of the epidermis to the cornified (horny) layer of the skin. Successive stages of differentiation of the keratinocytes forming the epidermal layers are basal cell, spinous or prickle cell, and the granular cell.") AnnotationAssertion( "CL:0002185") AnnotationAssertion( "BTO:0000667") AnnotationAssertion( "CALOHA:TS-0500") AnnotationAssertion( "FMA:62879") AnnotationAssertion( "keratinized cell of epidermis") AnnotationAssertion( "malpighian cell") AnnotationAssertion( "cell") AnnotationAssertion( "CL:0000312") AnnotationAssertion(rdfs:comment "Keratinocytes are reportedly CDw210a-negative, CDw210b-positive, CD281-positive, CD282-positive, CD285-positive, IL22Ra1-positive, Human keratinocytes are reportedly capable of secreting BD-2, BD-3, hCAP-18, CXCL1, CXCL5, CXCL8, elafin, MMP-3, NGAL, PDGF-A, S100A7, S100A8, and S100A9. Transcription factors: STAT3-positive.") AnnotationAssertion(rdfs:label "keratinocyte") SubClassOf( ) SubClassOf( ) # Class: (serous secreting cell) AnnotationAssertion( "Columnar glandular cell with irregular nucleus, copious granular endoplasmic reticulum and supranuclear granules. Secretes a watery fluid containing proteins known as serous fluid.") AnnotationAssertion( "BTO:0003687") AnnotationAssertion( "FMA:62511") AnnotationAssertion( "serous cell") AnnotationAssertion( "cell") AnnotationAssertion( "CL:0000313") AnnotationAssertion(rdfs:label "serous secreting cell") SubClassOf( ) # Class: (mucus secreting cell) AnnotationAssertion( "BTO:0003689") AnnotationAssertion( "mucous cell") AnnotationAssertion( "cell") AnnotationAssertion( "CL:0000319") AnnotationAssertion(rdfs:label "mucus secreting cell") SubClassOf( ) # Class: (pneumocyte) AnnotationAssertion( "An epithelial cell that lines the peripheral gas exchange region of the lungs of air-breathing vertebrates.") AnnotationAssertion( "BTO:0000395") AnnotationAssertion( "CALOHA:TS-2168") AnnotationAssertion( "FMA:62499") AnnotationAssertion( "alveolar epithelial cell") AnnotationAssertion( "pneumonocyte") AnnotationAssertion( "cell") AnnotationAssertion( "CL:0000322") AnnotationAssertion(rdfs:label "pneumocyte") SubClassOf( ) # Class: (extracellular matrix secreting cell) AnnotationAssertion( "cell") AnnotationAssertion( "CL:0000327") AnnotationAssertion(rdfs:label "extracellular matrix secreting cell") SubClassOf( ) SubClassOf( ) # Class: (migratory neural crest cell) AnnotationAssertion( "A cell derived from the specialized ectoderm flanking each side of the embryonic neural plate, which after the closure of the neural tube, forms masses of cells that migrate out from the dorsal aspect of the neural tube to spread throughout the body.") AnnotationAssertion( "FMA:86667") AnnotationAssertion( "cell") AnnotationAssertion( "CL:0000333") AnnotationAssertion(rdfs:label "migratory neural crest cell") SubClassOf( ) # Class: (mesenchyme condensation cell) AnnotationAssertion( "A mesenchymal cell in embryonic development found in a contracting mass and that gives rise to osteoprogenitors.") AnnotationAssertion( "cell") AnnotationAssertion( "CL:0000335") AnnotationAssertion(rdfs:label "mesenchyme condensation cell") SubClassOf( ) # Class: (scleral cell) AnnotationAssertion( "A cell of the sclera of the eye.") AnnotationAssertion( "cell") AnnotationAssertion( "CL:0000347") AnnotationAssertion(rdfs:label "scleral cell") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (trophoblast cell) AnnotationAssertion( "A cell lining the outside of the blastocyst. After binding to the endometrium, trophoblast cells develop into two distinct layers, an inner layer of mononuclear cytotrophoblast cells and an outer layer of continuous multinuclear cytoplasm, the syncytiotrophoblast cells, which form the early fetal-maternal interface.") AnnotationAssertion( "FMA:83028") AnnotationAssertion( "trophoblastic cell") AnnotationAssertion( "cell") AnnotationAssertion( "CL:0000351") AnnotationAssertion(rdfs:label "trophoblast cell") SubClassOf( ) # Class: (epiblast cell) AnnotationAssertion( "A cell of the outer layer of a blastula that gives rise to the ectoderm after gastrulation.") AnnotationAssertion( "cell") AnnotationAssertion( "CL:0000352") AnnotationAssertion(rdfs:label "epiblast cell") SubClassOf( ) # Class: (blastoderm cell) AnnotationAssertion( "An undifferentiated cell produced by early cleavages of the fertilized egg (zygote).") AnnotationAssertion( "BTO:0001473") AnnotationAssertion( "FMA:72551") AnnotationAssertion( "blastomere") AnnotationAssertion( "cell") AnnotationAssertion( "CL:0000353") AnnotationAssertion(rdfs:label "blastoderm cell") SubClassOf( ) # Class: (blastemal cell) AnnotationAssertion( "ncithesaurus:Blastemal_Cell") AnnotationAssertion( "blastema cell") AnnotationAssertion( "cell") AnnotationAssertion( "CL:0000354") AnnotationAssertion(rdfs:label "blastemal cell") SubClassOf( ) # Class: (animal zygote) AnnotationAssertion( "Diploid cell produced by the fusion of sperm cell nucleus and egg cell.") AnnotationAssertion( "zygote") AnnotationAssertion( "BTO:0000854") AnnotationAssertion( "EHDAA2:0004546") AnnotationAssertion( "FMA:72395") AnnotationAssertion( "cell") AnnotationAssertion( "CL:0000365") AnnotationAssertion(rdfs:label "animal zygote") SubClassOf( ) # Class: (hemocyte (sensu Arthropoda)) AnnotationAssertion( "FBbt:00005063") AnnotationAssertion( "cell") AnnotationAssertion( "CL:0000387") AnnotationAssertion(rdfs:label "hemocyte (sensu Arthropoda)") SubClassOf( ) # Class: (reticular cell) AnnotationAssertion( "Large, stellate fibroblast found along the network of collagen fibers of the reticulum of the spleen; synthesize the matrix components of the reticulum.") AnnotationAssertion( "FMA:62877") AnnotationAssertion( "reticulum cell") AnnotationAssertion( "cell") AnnotationAssertion( "CL:0000432") AnnotationAssertion(rdfs:label "reticular cell") SubClassOf( ) # Class: (luteinizing hormone secreting cell) AnnotationAssertion( "A peptide hormone secreting cell pituitary that produces luteinizing hormone.") AnnotationAssertion( "cell") AnnotationAssertion( "CL:0000438") AnnotationAssertion(rdfs:label "luteinizing hormone secreting cell") SubClassOf( ) # Class: (prolactin secreting cell) AnnotationAssertion( "A peptide hormone cell that secretes prolactin.") AnnotationAssertion( "cell") AnnotationAssertion( "CL:0000439") AnnotationAssertion(rdfs:label "prolactin secreting cell") SubClassOf( ) # Class: (melanocyte stimulating hormone secreting cell) AnnotationAssertion( "A cell of the intermediate pituitary that produces melanocyte stimulating hormone.") AnnotationAssertion( "BTO:0002277") AnnotationAssertion( "melanotrope") AnnotationAssertion( "melanotroph") AnnotationAssertion( "cell") AnnotationAssertion( "CL:0000440") AnnotationAssertion(rdfs:label "melanocyte stimulating hormone secreting cell") SubClassOf( ) # Class: (chief cell of parathyroid gland) AnnotationAssertion( "An epithelial cell of the parathyroid gland that is arranged in wide, irregular interconnecting columns; responsible for the synthesis and secretion of parathyroid hormone.") AnnotationAssertion( "BTO:0004712") AnnotationAssertion( "CALOHA:TS-2140") AnnotationAssertion( "FMA:69078") AnnotationAssertion( "parathyroid chief cell") AnnotationAssertion( "parathyroid gland chief cell") AnnotationAssertion( "parathyroid hormone secreting cell") AnnotationAssertion( "principal cell of parathyroid gland") AnnotationAssertion( "cell") AnnotationAssertion( "CL:0000446") AnnotationAssertion(rdfs:label "chief cell of parathyroid gland") SubClassOf( ) # Class: (white fat cell) AnnotationAssertion( "Fat cells with light coloration and few mitochondria. They contain a scant ring of cytoplasm surrounding a single large lipid droplet or vacuole.") AnnotationAssertion( "CALOHA:TS-1119") AnnotationAssertion( "FMA:83434") AnnotationAssertion( "white adipose cell") AnnotationAssertion( "white fat cell") AnnotationAssertion( "cell") AnnotationAssertion( "white adipocyte") AnnotationAssertion( "CL:0000448") AnnotationAssertion(rdfs:label "white fat cell") SubClassOf( ) # Class: (brown fat cell) AnnotationAssertion( "A cell from the thermogenic form of adipose tissue found in many species, particularly in newborns and hibernating mammals, but also in lesser amounts in adults of other mammals including humans. Brown fat is capable of rapid liberation of energy and seems to be important in the maintenance of body temperature immediately after birth and upon waking from hibernation.") AnnotationAssertion( "CALOHA:TS-0099") AnnotationAssertion( "FMA:83435") AnnotationAssertion( "brown adipocyte") AnnotationAssertion( "brown adipose cell") AnnotationAssertion( "cell") AnnotationAssertion( "CL:0000449") AnnotationAssertion(rdfs:label "brown fat cell") SubClassOf( ) # Class: (dendritic cell) AnnotationAssertion( "A cell of hematopoietic origin, typically resident in particular tissues, specialized in the uptake, processing, and transport of antigens to lymph nodes for the purpose of stimulating an immune response via T cell activation. These cells are lineage negative (CD3-negative, CD19-negative, CD34-negative, and CD56-negative).") AnnotationAssertion( "BTO:0002042") AnnotationAssertion( "CALOHA:TS-0194") AnnotationAssertion( "FMA:83036") AnnotationAssertion( "cell") AnnotationAssertion( "interdigitating cell") AnnotationAssertion( "veiled cell") AnnotationAssertion( "CL:0000451") AnnotationAssertion(rdfs:label "dendritic cell") SubClassOf( ) DisjointClasses( ) # Class: (Langerhans cell) AnnotationAssertion( "Langerhans cell is a conventional dendritic cell that has plasma membrane part CD207. A Langerhans cell is a stellate dendritic cell of myeloid origin, that appears clear on light microscopy and has a dark-staining, indented nucleus and characteristic inclusions (Birbeck granules) in the cytoplasm; Langerhans cells are found principally in the stratum spinosum of the epidermis, but they also occur in other stratified epithelia and have been identified in the lung, lymph nodes, spleen, and thymus.") AnnotationAssertion( "BTO:0000705") AnnotationAssertion( "CALOHA:TS-2375") AnnotationAssertion( "FMA:63072") AnnotationAssertion( "LC") AnnotationAssertion( "Langerhans' cell") AnnotationAssertion( "cell") AnnotationAssertion( "CL:0000453") AnnotationAssertion(rdfs:comment "Originally described in the dendritic cell ontology (DC_CL:0000021 )(PMID:19243617). These cells are also CD1a-high, CD14-negative, CD207-positive (langerin), CD324-positive (E-cadherin), and DCIR-positive. They reside in the epidermis.") AnnotationAssertion(rdfs:label "Langerhans cell") SubClassOf( ) # Class: (biogenic amine secreting cell) AnnotationAssertion( "cell") AnnotationAssertion( "CL:0000457") AnnotationAssertion(rdfs:label "biogenic amine secreting cell") SubClassOf( ) # Class: (adrenocorticotropic hormone secreting cell) AnnotationAssertion( "A peptide hormone secreting cell that produces adrenocorticotropin, or corticotropin.") AnnotationAssertion( "CL:0000640") AnnotationAssertion( "ACTH secreting cell") AnnotationAssertion( "adrenocorticotrophic hormone secreting cell") AnnotationAssertion( "corticotrophin hormone secreting cell") AnnotationAssertion( "corticotropin hormone secreting cell") AnnotationAssertion( "corticotropin secreting cell") AnnotationAssertion( "cell") AnnotationAssertion( "CL:0000467") AnnotationAssertion(rdfs:label "adrenocorticotropic hormone secreting cell") SubClassOf( ) # Class: (granulosa cell) AnnotationAssertion( "A supporting cell for the developing female gamete in the ovary of mammals. They develop from the coelomic epithelial cells of the gonadal ridge. Granulosa cells form a single layer around the mammalian oocyte in the primordial ovarian follicle and advance to form a multilayered cumulus oophorus surrounding the ovum in the Graafian follicle. The major functions of granulosa cells include the production of steroids and LH receptors.") AnnotationAssertion( "BTO:0000542") AnnotationAssertion( "CALOHA:TS-0729") AnnotationAssertion( "FMA:18718") AnnotationAssertion( "granulosa cell of ovary") AnnotationAssertion( "cell") AnnotationAssertion( "CL:0000501") AnnotationAssertion(rdfs:label "granulosa cell") SubClassOf( ) SubClassOf( ) # Class: (type D enteroendocrine cell) AnnotationAssertion( "A cell found throughout the gastrointestinal tract and in the pancreas. They secrete somatostatin in both an endocrine and paracrine manner. Somatostatin inhibits gastrin, cholecystokinin, insulin, glucagon, pancreatic enzymes, and gastric hydrochloric acid. A variety of substances which inhibit gastric acid secretion (vasoactive intestinal peptide, calcitonin gene-related peptide, cholecystokinin, beta-adrenergic agonists, and gastric inhibitory peptide) are thought to act by releasing somatostatin.") AnnotationAssertion( "FMA:62935") AnnotationAssertion( "D cell") AnnotationAssertion( "cell") AnnotationAssertion( "CL:0000502") AnnotationAssertion(rdfs:label "type D enteroendocrine cell") SubClassOf( ) SubClassOf( ) # Class: (theca cell) AnnotationAssertion( "A flattened stroma cell forming a sheath or theca outside the basal lamina lining the mature ovarian follicle. Thecal interstitial or stromal cells are steroidogenic, and produce primarily androgens which serve as precusors of estrogens in the granulosa cells.") AnnotationAssertion( "BTO:0002850") AnnotationAssertion( "FMA:18690") AnnotationAssertion( "cell") AnnotationAssertion( "CL:0000503") AnnotationAssertion(rdfs:label "theca cell") SubClassOf( ) SubClassOf( ) # Class: (type G enteroendocrine cell) AnnotationAssertion( "An endocrine cell found in the pyloric gland mucosa (antral mucosa) of the stomach of mammals and responsible for the secretion of gastrin and enkephalin. Most abundant in pyloric antrum, pyramidal in form with a narrow apex bearing long microvilli.") AnnotationAssertion( "BTO:0004108") AnnotationAssertion( "FMA:67609") AnnotationAssertion( "G cell") AnnotationAssertion( "cell") AnnotationAssertion( "CL:0000508") AnnotationAssertion(rdfs:label "type G enteroendocrine cell") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (syncytiotrophoblast cell) AnnotationAssertion( "A cell from the outer syncytial layer of the trophoblast of an early mammalian embryo, directly associated with the maternal blood supply. It secretes hCG in order to maintain progesterone secretion and sustain a pregnancy.") AnnotationAssertion( "FMA:83043") AnnotationAssertion( "plasmidotrophoblast") AnnotationAssertion( "syncytial trophoblast") AnnotationAssertion( "syntrophoblast") AnnotationAssertion( "cell") AnnotationAssertion( "CL:0000525") AnnotationAssertion(rdfs:label "syncytiotrophoblast cell") SubClassOf( ) SubClassOf( ) # Class: (afferent neuron) AnnotationAssertion( "A neuron which conveys sensory information centrally from the periphery.") AnnotationAssertion( "FMA:87653") AnnotationAssertion( "input neuron") AnnotationAssertion( "cell") AnnotationAssertion( "CL:0000526") AnnotationAssertion(rdfs:label "afferent neuron") SubClassOf( ) # Class: (efferent neuron) AnnotationAssertion( "A neuron which sends impulses peripherally to activate muscles or secretory cells.") AnnotationAssertion( "output neuron") AnnotationAssertion( "cell") AnnotationAssertion( "CL:0000527") AnnotationAssertion(rdfs:label "efferent neuron") SubClassOf( ) # Class: (primary neuron) AnnotationAssertion( "cell") AnnotationAssertion( "CL:0000530") AnnotationAssertion(rdfs:label "primary neuron") SubClassOf( ) # Class: (neuron) AnnotationAssertion( "The basic cellular unit of nervous tissue. Each neuron consists of a body, an axon, and dendrites. Their purpose is to receive, conduct, and transmit impulses in the nervous system.") AnnotationAssertion( ) AnnotationAssertion( "BTO:0000938") AnnotationAssertion( "CALOHA:TS-0683") AnnotationAssertion( "FBbt:00005106") AnnotationAssertion( "FMA:54527") AnnotationAssertion( "VHOG:0001483") AnnotationAssertion( "WBbt:0003679") AnnotationAssertion( "nerve cell") AnnotationAssertion( "cell") AnnotationAssertion( "CL:0000540") AnnotationAssertion(rdfs:comment "These cells are also reportedly CD4-negative and CD200-positive. They are also capable of producing CD40L and IFN-gamma.") AnnotationAssertion(rdfs:label "neuron") AnnotationAssertion(rdfs:label "neuron"@en) SubClassOf( ) # Class: (lymphocyte) AnnotationAssertion( "A lymphocyte is a leukocyte commonly found in the blood and lymph that has the characteristics of a large nucleus, a neutral staining cytoplasm, and prominent heterochromatin.") AnnotationAssertion( "BTO:0000775") AnnotationAssertion( "CALOHA:TS-0583") AnnotationAssertion( "FMA:62863") AnnotationAssertion( "VHOG:0001535") AnnotationAssertion( "cell") AnnotationAssertion( "CL:0000542") AnnotationAssertion(rdfs:comment "Editors note: consider adding taxon constraint to vertebrata (PMID:18025161)") AnnotationAssertion(rdfs:label "lymphocyte") SubClassOf( ) # Class: (neuronal brush cell) AnnotationAssertion( "cell") AnnotationAssertion( "CL:0000555") AnnotationAssertion(rdfs:label "neuronal brush cell") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (amacrine cell) AnnotationAssertion( "Interneuron of the vertebrate retina. They integrate, modulate, and interpose a temporal domain in the visual message presented to the retinal ganglion cells, with which they synapse in the inner plexiform layer. They lack large axons.") AnnotationAssertion( "BTO:0004044") AnnotationAssertion( "FBbt:00005127") AnnotationAssertion( "FMA:67766") AnnotationAssertion( "amacrine neuron") AnnotationAssertion( "cell") AnnotationAssertion( "CL:0000561") AnnotationAssertion(rdfs:comment "Not clear if this term overlaps with retinal bipolar neuron (CL:0000748).") AnnotationAssertion(rdfs:label "amacrine cell") SubClassOf( ) # Class: (angioblastic mesenchymal cell) AnnotationAssertion( "A mesenchymal stem cell capable of developing into blood vessel endothelium.") AnnotationAssertion( "angioblast") AnnotationAssertion( "chondroplast") AnnotationAssertion( "cell") AnnotationAssertion( "CL:0000566") AnnotationAssertion(rdfs:comment "These cells are reportedly CD31-positive, CD34-positive, CD144-positive, CD309-positive, and TAL1-positive.") AnnotationAssertion(rdfs:label "angioblastic mesenchymal cell") SubClassOf( ) # Class: (parafollicular cell) AnnotationAssertion( "A neuroepithelial cells that occurs singly or in small groups, close to the outer follicular borders but within the follicular basement membrane of the thyroid. Expresses a form of the neural cell adhesion molecule (N-CAM) on their surface. Secretes calcitonin, 5-hydroxytryptamine and dopamine.") AnnotationAssertion( ) AnnotationAssertion( "FMA:68653") AnnotationAssertion( "C cell") AnnotationAssertion( "C cell of thyroid gland") AnnotationAssertion( "clear cell of thyroid gland") AnnotationAssertion( "parafollicular cell of thyroid gland") AnnotationAssertion( "thyroid parafollicular cell") AnnotationAssertion( "cell") AnnotationAssertion( "CL:0000570") AnnotationAssertion(rdfs:label "parafollicular cell") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (retinal cone cell) AnnotationAssertion( "One of the two photoreceptor cell types in the vertebrate retina. In cones the photopigment is in invaginations of the cell membrane of the outer segment. Cones are less sensitive to light than rods, but they provide vision with higher spatial and temporal acuity, and the combination of signals from cones with different pigments allows color vision.") AnnotationAssertion( "BTO:0001036") AnnotationAssertion( "CALOHA:TS-0866") AnnotationAssertion( "FMA:67748") AnnotationAssertion( "cell") AnnotationAssertion( "CL:0000573") AnnotationAssertion(rdfs:label "retinal cone cell") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (germ cell) AnnotationAssertion( "The reproductive cell in multicellular organisms.") AnnotationAssertion( "BTO:0000535") AnnotationAssertion( "VHOG:0001534") AnnotationAssertion( "WBbt:0006796") AnnotationAssertion( "cell") AnnotationAssertion( "CL:0000586") AnnotationAssertion(rdfs:label "germ cell") SubClassOf( ) # Class: (pyramidal neuron) AnnotationAssertion( "Pyramidal neurons have a pyramid-shaped soma with a single axon, a large apical dendrite and multiple basal dendrites. The apex and an apical dendrite typically point toward the pial surface and other dendrites and an axon emerging from the base. The axons may have local collaterals but also project outside their region. Pyramidal neurons are found in the cerebral cortex, the hippocampus, and the amygdala.") AnnotationAssertion( "BTO:0003102") AnnotationAssertion( "FMA:67310") AnnotationAssertion( "FMA:86775") AnnotationAssertion( "NIFSTD:sao862606388") AnnotationAssertion( "projection neuron") AnnotationAssertion( "pyramidal cell") AnnotationAssertion( "pyramidal neuron") AnnotationAssertion( "cell") AnnotationAssertion( "CL:0000598") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "pyramidal neuron") SubClassOf( ) # Class: (retinal rod cell) AnnotationAssertion( "One of the two photoreceptor cell types of the vertebrate retina. In rods the photopigment is in stacks of membranous disks separate from the outer cell membrane. Rods are more sensitive to light than cones, but rod mediated vision has less spatial and temporal resolution than cone vision.") AnnotationAssertion( "BTO:0001024") AnnotationAssertion( "CALOHA:TS-0870") AnnotationAssertion( "FMA:67747") AnnotationAssertion( "cell") AnnotationAssertion( "CL:0000604") AnnotationAssertion(rdfs:label "retinal rod cell") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (olfactory granule cell) AnnotationAssertion( "Granule cell that is part of the olfactory bulb.") AnnotationAssertion( "cell") AnnotationAssertion( "CL:0000626") AnnotationAssertion(rdfs:label "olfactory granule cell") SubClassOf( ) # Class: (Mueller cell) AnnotationAssertion( "Astrocyte-like radial glial cell that extends vertically throughout the retina, with the nucleus are usually in the middle of the inner nuclear layer.") AnnotationAssertion( "BTO:0003064") AnnotationAssertion( "Muller glia") AnnotationAssertion( "Müller cell") AnnotationAssertion( "cell") AnnotationAssertion( "CL:0000636") AnnotationAssertion(rdfs:label "Mueller cell") SubClassOf( ) # Class: (folliculostellate cell) AnnotationAssertion( "A supportive cell of the vertebrate pituitary that provides macromolecular transport and secretes hormones.") AnnotationAssertion( "cell") AnnotationAssertion( "CL:0000642") AnnotationAssertion(rdfs:label "folliculostellate cell") SubClassOf( ) # Class: (kidney granular cell) AnnotationAssertion( "A smooth muscle cell that synthesizes, stores, and secretes the enzyme renin. This cell type are located in the wall of the afferent arteriole at the entrance to the glomerulus. While having a different origin than other kidney smooth muscle cells, this cell type expresses smooth muscle actin upon maturation.") AnnotationAssertion( "CL:0000461") AnnotationAssertion( "juxtaglomerular cell") AnnotationAssertion( "FMA:84138") AnnotationAssertion( "JG cell") AnnotationAssertion( "renin secreting cell") AnnotationAssertion( "cell") AnnotationAssertion( "CL:0000648") AnnotationAssertion(rdfs:label "kidney granular cell") SubClassOf( ) SubClassOf( ) # Class: (prickle cell) AnnotationAssertion( "A cell with delicate radiating processes known as desmosomes that form intercellular bridges between other cells of this type. This cell type forms the stratum spinosum (prickle cell layer). A function of this cell is to generate keratin.") AnnotationAssertion( "CL:0002186") AnnotationAssertion( "FMA:69059") AnnotationAssertion( "prickle cell of epidermis") AnnotationAssertion( "cell") AnnotationAssertion( "CL:0000649") AnnotationAssertion(rdfs:label "prickle cell") SubClassOf( ) # Class: (mesangial cell) AnnotationAssertion( "A cell type that encapsulates the capillaries and venules in the kidney. This cell secretes mesangial matrix that provides the structural support for the capillaries.") AnnotationAssertion( "BTO:0000853") AnnotationAssertion( "CALOHA:TS-0617") AnnotationAssertion( "FMA:70972") AnnotationAssertion( "kidney mesangial cell") AnnotationAssertion( "cell") AnnotationAssertion( "CL:0000650") AnnotationAssertion(rdfs:comment "Do all of these cells really develop from some mesenchymal stem cell?") AnnotationAssertion(rdfs:label "mesangial cell") SubClassOf( ) # Class: (pinealocyte) AnnotationAssertion( "This cell type produces and secretes melatonin and forms the pineal parenchyma. Extending from each cell body, which has a spherical, oval or lobulated mucleus, are one or more tortuous basophilic processes, containing parallel microtubules known as synaptic ribbons. These processes end in expanded terminal buds near capillaries or less, frequently, ependymal cells of the pineal recess. The terminal buds contain granular endoplasmic reticulum, mitochondria and electron-dense cored vesicles, which store monoamines and polypeptide hormones, release of which appears to require sympathetic innervation.") AnnotationAssertion( "BTO:0001068") AnnotationAssertion( "FMA:83417") AnnotationAssertion( "cell") AnnotationAssertion( "CL:0000652") AnnotationAssertion(rdfs:label "pinealocyte") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (glomerular visceral epithelial cell) AnnotationAssertion( "A glomerular visceral epithelial cell is a specialized kidney epithelial cell that contains \"feet\" that interdigitate with the \"feet\" of other glomerular epithelial cells.") AnnotationAssertion( "epithelial cell of visceral layer of glomerular capsule") AnnotationAssertion( "BTO:0002295") AnnotationAssertion( "FMA:70967") AnnotationAssertion( "glomerular podocyte") AnnotationAssertion( "podocyte") AnnotationAssertion( "cell") AnnotationAssertion( "CL:0000653") AnnotationAssertion(rdfs:comment "GO has podocyte as a related synonym due to concern this may refer to more than one cell type. However, this did not turn up in my search. If podocyte does refer to more than one cell type, then we should classify the synonym to 'related'[tfm].") AnnotationAssertion(rdfs:label "glomerular visceral epithelial cell") SubClassOf( ) SubClassOf( ) # Class: (muscle precursor cell) AnnotationAssertion( "A non-terminally differentiated cell that is capable of developing into a muscle cell.") AnnotationAssertion( "cell") AnnotationAssertion( "CL:0000680") AnnotationAssertion(rdfs:label "muscle precursor cell") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (PP cell) AnnotationAssertion( "A cell that stores and secretes pancreatic polypeptide hormone.") AnnotationAssertion( "FMA:62938") AnnotationAssertion( "FMA:83409") AnnotationAssertion( "type F enteroendocrine cell") AnnotationAssertion( "cell") AnnotationAssertion( "CL:0000696") AnnotationAssertion(rdfs:label "PP cell") SubClassOf( ) # Class: (dopaminergic neuron) AnnotationAssertion( "A neuron that releases dopamine as a neurotransmitter.") AnnotationAssertion( "BTO:0004032") AnnotationAssertion( "FMA:84787") AnnotationAssertion( "WBbt:0006746") AnnotationAssertion( "dopaminergic cell") AnnotationAssertion( "cell") AnnotationAssertion( "CL:0000700") AnnotationAssertion(rdfs:label "dopaminergic neuron") SubClassOf( ) SubClassOf( ) # Class: (stratum granulosum cell) AnnotationAssertion( "cell") AnnotationAssertion( "CL:0000712") AnnotationAssertion(rdfs:label "stratum granulosum cell") SubClassOf( ) # Class: (striated muscle cell) AnnotationAssertion( "Muscle cell which has as its direct parts myofilaments organized into sarcomeres.") AnnotationAssertion( "BTO:0002916") AnnotationAssertion( "CALOHA:TS-2157") AnnotationAssertion( "FMA:86936") AnnotationAssertion( "cell") AnnotationAssertion( "CL:0000737") AnnotationAssertion(rdfs:label "striated muscle cell") SubClassOf( ) # Class: (leukocyte) AnnotationAssertion( "An achromatic cell of the myeloid or lymphoid lineages capable of ameboid movement, found in blood or other tissue.") AnnotationAssertion( "BTO:0000751") AnnotationAssertion( "CALOHA:TS-0549") AnnotationAssertion( "FMA:62852") AnnotationAssertion( "immune cell") AnnotationAssertion( "leucocyte") AnnotationAssertion( "white blood cell") AnnotationAssertion( "cell") AnnotationAssertion( "CL:0000738") AnnotationAssertion(rdfs:label "leukocyte") SubClassOf( ) # Class: (retinal ganglion cell) AnnotationAssertion( "The set of neurons that receives neural inputs via bipolar, horizontal and amacrine cells. The axons of these cells make up the optic nerve.") AnnotationAssertion( "BTO:0001800") AnnotationAssertion( "FMA:67765") AnnotationAssertion( "RGC") AnnotationAssertion( "gangliocyte") AnnotationAssertion( "ganglion cell of retina") AnnotationAssertion( "cell") AnnotationAssertion( "CL:0000740") AnnotationAssertion(rdfs:label "retinal ganglion cell") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (retina horizontal cell) AnnotationAssertion( "A neuron that laterally connects other neurons in the inner nuclear layer of the retina.") AnnotationAssertion( "BTO:0004120") AnnotationAssertion( "horizontal cell") AnnotationAssertion( "cell") AnnotationAssertion( "CL:0000745") AnnotationAssertion(rdfs:label "retina horizontal cell") SubClassOf( ) # Class: (cardiac muscle cell) AnnotationAssertion( "Cardiac muscle cells are striated muscle cells that are responsible for heart contraction. In mammals, the contractile fiber resembles those of skeletal muscle but are only one third as large in diameter, are richer in sarcoplasm, and contain centrally located instead of peripheral nuclei.") AnnotationAssertion( "FMA:83808") AnnotationAssertion( "cardiocyte") AnnotationAssertion( "BTO:0001539") AnnotationAssertion( "CALOHA:TS-0115") AnnotationAssertion( "FMA:14067") AnnotationAssertion( "cardiac muscle fiber") AnnotationAssertion( "cardiac myocyte") AnnotationAssertion( "cardiomyocyte") AnnotationAssertion( "heart muscle cell") AnnotationAssertion( "cell") AnnotationAssertion( "CL:0000746") AnnotationAssertion(rdfs:comment "This class encompasses the muscle cells responsible for heart* contraction in both vertebrates and arthropods. The ultrastucture of a wide range of arthropod heart cells has been examined including spiders, horseshoe crabs, crustaceans (see Sherman, 1973 and refs therein) and insects (see Lehmacher et al (2012) and refs therein). According to these refs, the cells participating in heart contraction in all cases are transversely striated. Insects hearts additionally contain ostial cells, also transversely striated muscle cells, but which do not participate in heart contraction.") AnnotationAssertion(rdfs:label "cardiac muscle cell") SubClassOf( ) SubClassOf( ) # Class: (retinal bipolar neuron) AnnotationAssertion( "A bipolar neuron found in the retina and having connections with photoreceptors cells and neurons in the inner plexiform layer.") AnnotationAssertion( "CL:0000748") AnnotationAssertion(rdfs:label "retinal bipolar neuron") SubClassOf( ) SubClassOf( ) # Class: (naive B cell) AnnotationAssertion( "A naive B cell is a mature B cell that has the phenotype surface IgD-positive, surface IgM-positive, CD20-positive, CD27-negative and that has not yet been activated by antigen in the periphery.") AnnotationAssertion( "naive B lymphocyte") AnnotationAssertion( "naive B-cell") AnnotationAssertion( "naive B-lymphocyte") AnnotationAssertion( "cell") AnnotationAssertion( "CL:0000788") AnnotationAssertion(rdfs:comment "This cell type is compatible with the HIPC Lyoplate markers for 'naive B cell'. Per DSD: Naive B cells are also reportedly CD10-negative, CD19-positive, CD20-positive, CD21-positive, CD22-positive, CD25-negative, CD27-negative, CD34-negative, CD40-positive, CD43-negative, CD45-positive, CD48-positive, CD53-positive, CD80-negative, CD81-positive, CD84-positive, CD86-negative, CD95-negative, CD138-negative, CD150-positive, CD184/CXCR4-positive, CD185/CXCR5-positive, CD196/CCR6-positive, CD200-positive, CD229-positive, CD243-positive, CD289-positive, CD290-positive, CD352-positive, MHCII/HLA-DR-positive, cadherin 9-positive, and sIgH-positive, Transcription factors: Pax5-positive, ETS1-positive, FOXO1A-positive, KLF4-positive, KLF9-positive, MiTF-positive, OBF1-positive, PLZF-positive, and SpiB-positive.") AnnotationAssertion(rdfs:label "naive B cell") SubClassOf( ) # Class: (microvillous olfactory receptor neuron) AnnotationAssertion( "An olfactory receptor cell in which the apical ending of the dendrite is a knob that bears numerous microvilli.") AnnotationAssertion( "microvillous olfactory sensory neuron") AnnotationAssertion( "cell") AnnotationAssertion( "microvillous sensory neuron") AnnotationAssertion( "CL:0000848") AnnotationAssertion(rdfs:label "microvillous olfactory receptor neuron") SubClassOf( ) # Class: (olfactory epithelial support cell) AnnotationAssertion( "Olfactory epithelial support cell is a columnar cell that extends from the epithelial free margin to the basement membrane of the olfactory epithelium. This cell type has a large, vertically, elongate, euchromatic nucleus, along with other nuclei, forms a layer superficial to the cell body of the receptor cell; sends long somewhat irregular microvilli into the mucus layer; at the base, with expanded end-feet containing numerous lamellated dense bodies resembling lipofuscin of neurons.") AnnotationAssertion( "FMA:62302") AnnotationAssertion( "olfactory sustentacular cell") AnnotationAssertion( "supporting cell of olfactory epithelium") AnnotationAssertion( "sustentaculocyte of olfactory epithelium") AnnotationAssertion( "cell") AnnotationAssertion( "CL:0000853") AnnotationAssertion(rdfs:label "olfactory epithelial support cell") SubClassOf( ) # Class: (neuromast hair cell) AnnotationAssertion( "Neuromast hair cell is a hair cell that acts as a sensory receptor of the neuromast; it is morphologically polarized as a result of the relative position of the single kinocilium and the clusters of stereocilia on its apical surface.") AnnotationAssertion( "cell") AnnotationAssertion( "CL:0000856") AnnotationAssertion(rdfs:label "neuromast hair cell") SubClassOf( ) SubClassOf( ) # Class: (perivascular macrophage) AnnotationAssertion( "A central nervous system macrophage found in small blood vessels in the brain. Markers include CD14+CD16+CD163+.") AnnotationAssertion( "cell") AnnotationAssertion( "CL:0000881") AnnotationAssertion(rdfs:comment "Markers: Human/monkey, mice: CD163. Human: CD14+CD16+CD163+.") AnnotationAssertion(rdfs:label "perivascular macrophage") SubClassOf( ) SubClassOf( ) # Class: (thymocyte) AnnotationAssertion( "An immature T cell located in the thymus.") AnnotationAssertion( "immature T cell") AnnotationAssertion( "immature T lymphocyte") AnnotationAssertion( "immature T-cell") AnnotationAssertion( "immature T-lymphocyte") AnnotationAssertion( "BTO:0001372") AnnotationAssertion( "CALOHA:TS-1042") AnnotationAssertion( "FMA:72202") AnnotationAssertion( "XAO:0003159") AnnotationAssertion( "thymic lymphocyte") AnnotationAssertion( "cell") AnnotationAssertion( "CL:0000893") AnnotationAssertion(rdfs:label "thymocyte") SubClassOf( ) # Class: (hematopoietic cell) AnnotationAssertion( "A cell of a hematopoietic lineage.") AnnotationAssertion( "BTO:0000574") AnnotationAssertion( "CALOHA:TS-2017") AnnotationAssertion( "FMA:70366") AnnotationAssertion( "FMA:83598") AnnotationAssertion( "haematopoietic cell") AnnotationAssertion( "haemopoietic cell") AnnotationAssertion( "hemopoietic cell") AnnotationAssertion( "cell") AnnotationAssertion( "CL:0000988") AnnotationAssertion(rdfs:label "hematopoietic cell") SubClassOf( ) # Class: (cerebellar granule cell) AnnotationAssertion( "Granule cell that is part of the cerebellum.") AnnotationAssertion( "BTO:0004278") AnnotationAssertion( "cell") AnnotationAssertion( "CL:0001031") AnnotationAssertion(rdfs:label "cerebellar granule cell") SubClassOf( ) # Class: (hippocampal granule cell) AnnotationAssertion( "Granule cell that is part of the hippocampus.") AnnotationAssertion( "cell") AnnotationAssertion( "CL:0001033") AnnotationAssertion(rdfs:label "hippocampal granule cell") SubClassOf( ) # Class: (terminally differentiated osteoblast) AnnotationAssertion( "Osteoblast that is terminally differentiated, located adjacent to acellular or cellular bone tissue within periosteum, and is capable of mineralizing the matrix.") AnnotationAssertion( "VSAO:0000116") AnnotationAssertion( "cl") AnnotationAssertion( "CL:0001039") AnnotationAssertion(rdfs:label "terminally differentiated osteoblast") SubClassOf( ) # Class: (non-terminally differentiated osteoblast) AnnotationAssertion( "Osteoblast that is non-terminally differentiated and located in cellular bone tissue or under the periosteum in acellular bone.") AnnotationAssertion( "VSAO:0000117") AnnotationAssertion( "cl") AnnotationAssertion( "CL:0001040") AnnotationAssertion(rdfs:comment "VSAO relationship simplified OBO_REL:integral_part_of VSAO:0000118") AnnotationAssertion(rdfs:label "non-terminally differentiated osteoblast") SubClassOf( ) # Class: (type I pneumocyte) AnnotationAssertion( "A type I pneumocyte is a flattened, branched pneumocyte that covers more than 98% of the alveolar surface. This large cell has thin (50-100 nm) cytoplasmic extensions to form the air-blood barrier essential for normal gas exchange.") AnnotationAssertion( "tmeehan") AnnotationAssertion( "2010-06-23T04:37:54Z") AnnotationAssertion( "BTO:0000780") AnnotationAssertion( "FMA:62500") AnnotationAssertion( "AT1") AnnotationAssertion( "ATI") AnnotationAssertion( "lung type 1 cells") AnnotationAssertion( "membranous pneumocytes") AnnotationAssertion( "pulmonary alveolar type I cell") AnnotationAssertion( "small alveolar cells") AnnotationAssertion( "squamous alveolar cell") AnnotationAssertion( "squamous alveolar lining cell") AnnotationAssertion( "type 1 alveolar epithelial cells") AnnotationAssertion( "type 1 pneumocyte") AnnotationAssertion( "type I alveolar cells") AnnotationAssertion( "type I alveolar epithelial cells") AnnotationAssertion( "cell") AnnotationAssertion( "CL:0002062") AnnotationAssertion(rdfs:label "type I pneumocyte") SubClassOf( ) # Class: (type II pneumocyte) AnnotationAssertion( "A type II pneumocyte is a pneumocyte that modulates the fluid surrounding the alveolar epithelium by secreting and recycling surfactants. This cell type also contributes to tissue repair and can differentiate after injury into a type I pneumocyte. Thicker than squamous alveolar cells, have a rounded apical surface that projects above the level of surrounding epithelium. The free surface is covered by short microvilli.") AnnotationAssertion( "tmeehan") AnnotationAssertion( "2010-06-24T12:04:13Z") AnnotationAssertion( "BTO:0000538") AnnotationAssertion( "FMA:62501") AnnotationAssertion( "AT2") AnnotationAssertion( "ATII") AnnotationAssertion( "TII") AnnotationAssertion( "cuboidal type II cell") AnnotationAssertion( "granular pneumocyte") AnnotationAssertion( "great alveolar cell") AnnotationAssertion( "lung type 2 cell") AnnotationAssertion( "type 2 alveolar epithelial cell") AnnotationAssertion( "type 2 alveolocyte") AnnotationAssertion( "type 2 pneumocyte") AnnotationAssertion( "type II alveolar cell") AnnotationAssertion( "type II alveolar epithelial cell") AnnotationAssertion( "type II alveolocyte") AnnotationAssertion( "cell") AnnotationAssertion( "lung type II cell") AnnotationAssertion( "CL:0002063") AnnotationAssertion(rdfs:label "type II pneumocyte") SubClassOf( ) SubClassOf( ) # Class: (pancreatic acinar cell) AnnotationAssertion( "A secretory cell found in pancreatic acini that secretes digestive enzymes and mucins. This cell is a typical zymogenic cell, have a basal nucleus and basophilic cytoplasm consisting of regular arrays of granular endoplasmic reticulum with mitochondria and dense secretory granules.") AnnotationAssertion( "tmeehan") AnnotationAssertion( "2010-06-24T03:16:29Z") AnnotationAssertion( "BTO:0000028") AnnotationAssertion( "CALOHA:TS-0737") AnnotationAssertion( "FMA:63032") AnnotationAssertion( "acinar cell of pancreas") AnnotationAssertion( "cell") AnnotationAssertion( "CL:0002064") AnnotationAssertion(rdfs:label "pancreatic acinar cell") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (type A enteroendocrine cell) AnnotationAssertion( "An enteroendocrine cell that produces glucagon.") AnnotationAssertion( "tmeehan") AnnotationAssertion( "2010-09-10T10:48:54Z") AnnotationAssertion( "FMA:62939") AnnotationAssertion( "cell") AnnotationAssertion( "CL:0002067") AnnotationAssertion(rdfs:label "type A enteroendocrine cell") SubClassOf( ) # Class: (Purkinje myocyte) AnnotationAssertion( "Specialized cardiac myocyte that is subendocardially interspersed with the regular cardiac muscle cell. They are uninucleate cylindrical cells, associated end-to-end in long rows, continue from the node to the atrioventricular bundle; relatively short compared to ordinary myocytes but are nearly twice their diameter.") AnnotationAssertion( "tmeehan") AnnotationAssertion( "2010-06-28T08:36:15Z") AnnotationAssertion( "BTO:0001032") AnnotationAssertion( "FMA:14146") AnnotationAssertion( "Purkinje cell fiber") AnnotationAssertion( "Purkinje muscle cell") AnnotationAssertion( "myocytus conducens cardiacus") AnnotationAssertion( "cell") AnnotationAssertion( "CL:0002068") AnnotationAssertion(rdfs:label "Purkinje myocyte") SubClassOf( ) # Class: (transitional myocyte) AnnotationAssertion( "Specialized cardiac myocyte which is in the internodal tract and atrioventricular node. The cell is more slender than ordinary atrial myocytes and has more myofibrils than nodal myocytes.") AnnotationAssertion( "tmeehan") AnnotationAssertion( "2010-06-29T02:39:32Z") AnnotationAssertion( "FMA:67142") AnnotationAssertion( "cell") AnnotationAssertion( "CL:0002073") AnnotationAssertion(rdfs:label "transitional myocyte") SubClassOf( ) # Class: (myocardial endocrine cell) AnnotationAssertion( "The myoendocrine cellis a specialized myocyte localized mainly in the right and left atrial appendages, and also scattered within other areas of the atria and along the conductive system in the ventricular septum. The most conspicuous feature distinguishing myoendocrine cells from other atrial myoctyes is the presence of membane-bounded secretory granules (these granules contain precursor of cardiodilatins or atrial natriuretic polypeptides).") AnnotationAssertion( "tmeehan") AnnotationAssertion( "2010-06-29T11:50:47Z") AnnotationAssertion( "FMA:67111") AnnotationAssertion( "cell") AnnotationAssertion( "CL:0002074") AnnotationAssertion(rdfs:label "myocardial endocrine cell") SubClassOf( ) SubClassOf( ) # Class: (ecto-epithelial cell) AnnotationAssertion( "An epithelial cell derived from ectoderm.") AnnotationAssertion( "tmeehan") AnnotationAssertion( "2010-06-29T03:38:22Z") AnnotationAssertion( "FMA:69074") AnnotationAssertion( "cell") AnnotationAssertion( "CL:0002077") AnnotationAssertion(rdfs:label "ecto-epithelial cell") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (type II cell of carotid body) AnnotationAssertion( "This cell resembles a glia cell, express the glial marker S100 and act as a supporting cell to type I cell. This cell is located in a small cluster of type I and type II cells near the fork of the carotid artery.") AnnotationAssertion( "tmeehan") AnnotationAssertion( "2010-06-30T04:23:42Z") AnnotationAssertion( "FMA:84187") AnnotationAssertion( "sheath cell of carotid body") AnnotationAssertion( "cell") AnnotationAssertion( "CL:0002081") AnnotationAssertion(rdfs:label "type II cell of carotid body") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (type II cell of adrenal medulla) AnnotationAssertion( "A chromaffin cell of the adrenal medulla that produces epinephrine.") AnnotationAssertion( "tmeehan") AnnotationAssertion( "2010-07-14T09:41:42Z") AnnotationAssertion( "FMA:69322") AnnotationAssertion( "adremergic chromaffin cell") AnnotationAssertion( "adrenal secreting cell of the adrenal medulla") AnnotationAssertion( "epiniphrine secreting cell of the adrenal medulla") AnnotationAssertion( "cell") AnnotationAssertion( "CL:0002082") AnnotationAssertion(rdfs:label "type II cell of adrenal medulla") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (type I cell of adrenal medulla) AnnotationAssertion( "A chromaffin cell of the adrenal medulla that produces norepinephrine.") AnnotationAssertion( "tmeehan") AnnotationAssertion( "2010-07-14T10:12:24Z") AnnotationAssertion( "FMA:69321") AnnotationAssertion( "noradrenergic chromaffin cell") AnnotationAssertion( "cell") AnnotationAssertion( "CL:0002083") AnnotationAssertion(rdfs:label "type I cell of adrenal medulla") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (bone marrow cell) AnnotationAssertion( "A cell found in the bone marrow. This can include fibroblasts, macrophages, adipocytes, osteoblasts, osteoclasts, endothelial cells and hematopoietic cells.") AnnotationAssertion( "tmeehan") AnnotationAssertion( "2010-07-22T04:48:15Z") AnnotationAssertion( "BTO:0004850") AnnotationAssertion( "FMA:83621") AnnotationAssertion( "cell") AnnotationAssertion( "CL:0002092") AnnotationAssertion(rdfs:comment "MH consider whether bone marrow cells are bone cells in the structural sense vs. being part of bone organ sense.") AnnotationAssertion(rdfs:label "bone marrow cell") SubClassOf( ) # Class: (hilus cell of ovary) AnnotationAssertion( "A cell in the hilum of the ovary that produces androgens.") AnnotationAssertion( "tmeehan") AnnotationAssertion( "2010-08-23T11:18:18Z") AnnotationAssertion( "FMA:18710") AnnotationAssertion( "hilar cell of ovary") AnnotationAssertion( "cell") AnnotationAssertion( "CL:0002095") AnnotationAssertion(rdfs:label "hilus cell of ovary") SubClassOf( ) SubClassOf( ) # Class: (type II cell of adrenal cortex) AnnotationAssertion( "A cell in the zona fasciculata that produce glucocorticoids, e.g cortisol.") AnnotationAssertion( "tmeehan") AnnotationAssertion( "2010-08-24T01:50:42Z") AnnotationAssertion( "FMA:69547") AnnotationAssertion( "type II cortical cell of adrenal gland") AnnotationAssertion( "cell") AnnotationAssertion( "CL:0002136") AnnotationAssertion(rdfs:label "type II cell of adrenal cortex") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (type III cell of adrenal cortex) AnnotationAssertion( "A cell in the zona reticularis that produce sex hormones.") AnnotationAssertion( "tmeehan") AnnotationAssertion( "2010-08-24T01:50:44Z") AnnotationAssertion( "FMA:69564") AnnotationAssertion( "cell") AnnotationAssertion( "CL:0002137") AnnotationAssertion(rdfs:label "type III cell of adrenal cortex") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (endothelial cell of lymphatic vessel) AnnotationAssertion( "A endothelial cell of a lymphatic vessel. The border of the oak leaf-shaped endothelial cell of initial lymphatics are joined by specialized buttons. The discontinuous feature of buttons distinguishes them from zippers in collecting lymphatics, but both types of junctions are composed of proteins typical of adherens junctions and tight junctions found in the endothelium of blood vessels. Buttons seal the sides of flaps of the oak leaf-shaped endothelial cell, leaving open the tips of flaps as routes for fluid entry without disassembly and reformation of intercellular junctions.") AnnotationAssertion( "tmeehan") AnnotationAssertion( "2010-08-24T02:05:28Z") AnnotationAssertion( "CL:1000421") AnnotationAssertion( "BTO:0004167") AnnotationAssertion( "FMA:68458") AnnotationAssertion( "LEC") AnnotationAssertion( "lymphatic endothelial cell") AnnotationAssertion( "cell") AnnotationAssertion( "CL:0002138") AnnotationAssertion(rdfs:label "endothelial cell of lymphatic vessel") SubClassOf( ) # Class: (ciliated columnar cell of tracheobronchial tree) AnnotationAssertion( "A ciliated columnar cell found in the trachea and bronchus. Vary from low to tall columnar; possesses up to 300 cilia at its surface, interspersed with long irregular microvilli with the cilia varying in length from about 6um in the trachea to about 4um in the terminal bronchioles; driving force of the ciliary current in the bronchial tree.") AnnotationAssertion( "tmeehan") AnnotationAssertion( "2010-08-24T03:38:29Z") AnnotationAssertion( "FMA:70542") AnnotationAssertion( "cell") AnnotationAssertion( "CL:0002145") AnnotationAssertion(rdfs:label "ciliated columnar cell of tracheobronchial tree") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (corneocyte) AnnotationAssertion( "The dead keratin-filled squamous cell of the stratum corneum. This cell type lacks a nucleus.") AnnotationAssertion( "tmeehan") AnnotationAssertion( "2010-08-24T10:53:03Z") AnnotationAssertion( "BTO:0001943") AnnotationAssertion( "FMA:68650") AnnotationAssertion( "cell") AnnotationAssertion( "CL:0002153") AnnotationAssertion(rdfs:label "corneocyte") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (epithelial cell of Malassez) AnnotationAssertion( "An epithelial cell that remains from the disintegration of the epithelial root sheath involved in the development of teeth.") AnnotationAssertion( "tmeehan") AnnotationAssertion( "2010-08-26T08:51:27Z") AnnotationAssertion( "FMA:62987") AnnotationAssertion( "epithelial cell rests of Malassez") AnnotationAssertion( "epithelial debris of Malassez") AnnotationAssertion( "cell") AnnotationAssertion( "CL:0002166") AnnotationAssertion(rdfs:label "epithelial cell of Malassez") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (basal cell of olfactory epithelium) AnnotationAssertion( "An epithelial cell located on the basal lamina of the olfactory epithelium.") AnnotationAssertion( "tmeehan") AnnotationAssertion( "2010-08-26T01:58:54Z") AnnotationAssertion( "CL:1000395") AnnotationAssertion( "horizontal basal call") AnnotationAssertion( "FMA:62303") AnnotationAssertion( "cell") AnnotationAssertion( "CL:0002169") AnnotationAssertion(rdfs:label "basal cell of olfactory epithelium") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (extraglomerular mesangial cell) AnnotationAssertion( "A cell that is a specialized type of pericyte providing structural support for the capillary loops of kidney. A flat, elongated cell with extensive fine cytoplasmic processes found outside the kidney glomerulus near the macula densa and bound laterally by afferent and efferent arterioles. Being phagocytic, this cell participates in the continuous turnover of the basal lamina by removing its outer portion containing residues of filtration, while the lamina is renewed on its inner surface by the endothelial cells.") AnnotationAssertion( "tmeehan") AnnotationAssertion( "2010-08-25T02:20:55Z") AnnotationAssertion( "FMA:84143") AnnotationAssertion( "KUPO:0001033") AnnotationAssertion( "Goormaghtigh cell") AnnotationAssertion( "polar cushion cells") AnnotationAssertion( "cell") AnnotationAssertion( "lacis cell") AnnotationAssertion( "CL:0002173") AnnotationAssertion(rdfs:label "extraglomerular mesangial cell") SubClassOf( ) SubClassOf( ) # Class: (follicular cell of ovary) AnnotationAssertion( "A cell within the follicle of an ovary.") AnnotationAssertion( "tmeehan") AnnotationAssertion( "2010-08-25T03:01:27Z") AnnotationAssertion( "EMAPA:31247") AnnotationAssertion( "FMA:70589") AnnotationAssertion( "cell") AnnotationAssertion( "CL:0002174") AnnotationAssertion(rdfs:label "follicular cell of ovary") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (basal cell of epidermis) AnnotationAssertion( "A basally situated, mitotically active, columnar-shaped keratinocyte attached to the basement membrane.") AnnotationAssertion( "tmeehan") AnnotationAssertion( "2010-08-26T03:12:49Z") AnnotationAssertion( "CL:1000439") AnnotationAssertion( "FMA:70571") AnnotationAssertion( "cell") AnnotationAssertion( "CL:0002187") AnnotationAssertion(rdfs:label "basal cell of epidermis") SubClassOf( ) # Class: (oxyphil cell of parathyroid gland) AnnotationAssertion( "An oncocyte located in the parathyroid gland.") AnnotationAssertion( "tmeehan") AnnotationAssertion( "2010-09-02T11:33:23Z") AnnotationAssertion( "FMA:69084") AnnotationAssertion( "cell") AnnotationAssertion( "CL:0002199") AnnotationAssertion(rdfs:label "oxyphil cell of parathyroid gland") SubClassOf( ) # Class: (intermediate epitheliocyte) AnnotationAssertion( "An epithelial cell present in the trachea and bronchi; columnar in shape; generally lack cilia; immature forms of ciliated or secretory cells which have been formed from stem cells.") AnnotationAssertion( "tmeehan") AnnotationAssertion( "2010-09-02T02:53:59Z") AnnotationAssertion( "FMA:69060") AnnotationAssertion( "undifferentiated columnar cell of tracheobronchial tree") AnnotationAssertion( "cell") AnnotationAssertion( "CL:0002209") AnnotationAssertion(rdfs:label "intermediate epitheliocyte") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (interstitial cell of pineal gland) AnnotationAssertion( "A cell located between the pinealocytes.") AnnotationAssertion( "tmeehan") AnnotationAssertion( "2010-09-02T04:28:41Z") AnnotationAssertion( "FMA:86575") AnnotationAssertion( "cell") AnnotationAssertion( "CL:0002220") AnnotationAssertion(rdfs:label "interstitial cell of pineal gland") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (marrow fibroblast) AnnotationAssertion( "A fibroblast in the bone marrow.") AnnotationAssertion( "tmeehan") AnnotationAssertion( "2010-09-07T02:25:18Z") AnnotationAssertion( "FMA:84377") AnnotationAssertion( "cell") AnnotationAssertion( "CL:0002240") AnnotationAssertion(rdfs:label "marrow fibroblast") SubClassOf( ) SubClassOf( ) # Class: (pluripotent stem cell) AnnotationAssertion( "A pluripotent stem cell has the ability to form cells from all three germ layers (ectoderm, mesoderm, and endoderm). However, unlike totipotent stem cells, they cell can not generate all the cells of the whole organism such as placenta.") AnnotationAssertion( "tmeehan") AnnotationAssertion( "2010-09-07T04:26:06Z") AnnotationAssertion( "FMA:70570") AnnotationAssertion( "cell") AnnotationAssertion( "CL:0002248") AnnotationAssertion(rdfs:label "pluripotent stem cell") SubClassOf( ) # Class: (thyroid follicular cell) AnnotationAssertion( "A cell type that varies from squamous to columnar, depending on their activity with microvillus directed luminally. This cell produces and secretes thyroid hormones.") AnnotationAssertion( "tmeehan") AnnotationAssertion( "2010-09-08T01:50:08Z") AnnotationAssertion( "BTO:0003736") AnnotationAssertion( "CALOHA:TS-1285") AnnotationAssertion( "FMA:68782") AnnotationAssertion( "follicular cell of thyroid gland") AnnotationAssertion( "principal cell of thyroid gland") AnnotationAssertion( "thyroid gland follicular cell") AnnotationAssertion( "cell") AnnotationAssertion( "CL:0002258") AnnotationAssertion(rdfs:label "thyroid follicular cell") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (epithelial cell of parathyroid gland) AnnotationAssertion( "An epithelial cell of the parathyroid gland.") AnnotationAssertion( "tmeehan") AnnotationAssertion( "2010-09-08T02:29:38Z") AnnotationAssertion( "CL:1000429") AnnotationAssertion( "FMA:70547") AnnotationAssertion( "cell") AnnotationAssertion( "CL:0002260") AnnotationAssertion(rdfs:label "epithelial cell of parathyroid gland") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (type I cell of carotid body) AnnotationAssertion( "A round or oval neuroepithelial cell that contacts other type I cells or capillaries. They occur in clusters that are surrounded by sheath cells (type-II cells) in the carotid body. This cell type is capable of secreting a number of neurotransmitters.") AnnotationAssertion( "tmeehan") AnnotationAssertion( "2010-09-13T01:40:21Z") AnnotationAssertion( "FMA:84186") AnnotationAssertion( "glomus cell") AnnotationAssertion( "cell") AnnotationAssertion( "CL:0002292") AnnotationAssertion(rdfs:label "type I cell of carotid body") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (epithelial cell of thymus) AnnotationAssertion( "An epithelial cell of the thymus. Epithelial reticular cells are pleomorphic, stellate, non-phagocytic cells which seem to be supportive in function and are held together by desmosomes. They replace the fibroblastoid reticular cells found in other lymphoid organs. Other epithelial cells in the medulla have the ultrastructure of secretory cells. Although different epithelial cells throughout the thymus appear alike by light microscopy their ultrastructure and function varies.") AnnotationAssertion( "tmeehan") AnnotationAssertion( "2010-09-13T02:34:22Z") AnnotationAssertion( "CL:1000459") AnnotationAssertion( "CALOHA:TS-1040") AnnotationAssertion( "FMA:72208") AnnotationAssertion( "epithelial cell of thymus gland") AnnotationAssertion( "epithelial reticular cell") AnnotationAssertion( "epithelial reticular cell of thymus") AnnotationAssertion( "thymic epithelial cell") AnnotationAssertion( "cell") AnnotationAssertion( "CL:0002293") AnnotationAssertion(rdfs:label "epithelial cell of thymus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (type-1 epithelial cell of thymus) AnnotationAssertion( "An epithelial cell with a well defined Golgi apparatus that makes up the continuous layer of cells bordering the thymic tissue beneath the capsule.") AnnotationAssertion( "tmeehan") AnnotationAssertion( "2010-09-13T02:37:23Z") AnnotationAssertion( "FMA:72209") AnnotationAssertion( "subcapsular thymic epithelial cell") AnnotationAssertion( "cell") AnnotationAssertion( "CL:0002294") AnnotationAssertion(rdfs:label "type-1 epithelial cell of thymus") SubClassOf( ) # Class: (somatotroph) AnnotationAssertion( "An acidophilic cell of the anterior pituitary that produces growth hormone, somatotropin.") AnnotationAssertion( "tmeehan") AnnotationAssertion( "2010-09-14T02:33:09Z") AnnotationAssertion( "FMA:83095") AnnotationAssertion( "somatotrope") AnnotationAssertion( "somatotropic cell") AnnotationAssertion( "somatrophic cell") AnnotationAssertion( "cell") AnnotationAssertion( "CL:0002312") AnnotationAssertion(rdfs:label "somatotroph") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ) # Class: (supporting cell of vestibular epithelium) AnnotationAssertion( "A supporting cell of the vestibular epithelium.") AnnotationAssertion( "tmeehan") AnnotationAssertion( "2010-09-14T03:31:44Z") AnnotationAssertion( "FMA:75607") AnnotationAssertion( "cell") AnnotationAssertion( "CL:0002316") AnnotationAssertion(rdfs:label "supporting cell of vestibular epithelium") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (neural cell) AnnotationAssertion( "A cell that is part of the nervous system.") AnnotationAssertion( "tmeehan") AnnotationAssertion( "2010-09-15T01:34:57Z") AnnotationAssertion( "CALOHA:TS-2040") AnnotationAssertion( "FMA:70333") AnnotationAssertion( "cell") AnnotationAssertion( "CL:0002319") AnnotationAssertion(rdfs:label "neural cell") SubClassOf( ) # Class: (connective tissue cell) AnnotationAssertion( "A cell of the supporting or framework tissue of the body, arising chiefly from the embryonic mesoderm and including adipose tissue, cartilage, and bone.") AnnotationAssertion( "tmeehan") AnnotationAssertion( "2010-09-15T03:01:54Z") AnnotationAssertion( "CL:1000406") AnnotationAssertion( "CALOHA:TS-2096") AnnotationAssertion( "FMA:63875") AnnotationAssertion( "cell") AnnotationAssertion( "CL:0002320") AnnotationAssertion(rdfs:label "connective tissue cell") SubClassOf( ) # Class: (myoepithelial cell of mammary gland) AnnotationAssertion( "A myoepithelial cell that surrounds milk-secreting luminal epithelial cells. This cell type contracts under the stimulation of oxytocin and is attached to the basement membrane by hemidesmosomes and to the adjacent luminal cells by desmosomes. This cell type expresses high level of keratin-14 and is estrogen receptor alpha negative.") AnnotationAssertion( "tmeehan") AnnotationAssertion( "2010-09-20T11:42:14Z") AnnotationAssertion( "CALOHA:TS-2378") AnnotationAssertion( "FMA:67800") AnnotationAssertion( "basal cell of lactiferous duct") AnnotationAssertion( "myoepithelial cell of lactiferous gland") AnnotationAssertion( "cell") AnnotationAssertion( "CL:0002324") AnnotationAssertion(rdfs:label "myoepithelial cell of mammary gland") SubClassOf( ) # Class: (trabecular meshwork cell) AnnotationAssertion( "A cell that lines the trabecular meshwork, which is an area of tissue in the eye located around the base of the cornea, near the ciliary body, and is responsible for draining the aqueous humor from the eye via the anterior chamber (the chamber on the front of the eye covered by the cornea). This cell may play a role in regulating intraocular pressure.") AnnotationAssertion( "tmeehan") AnnotationAssertion( "2010-09-23T04:18:50Z") AnnotationAssertion( "trabeculocyte") AnnotationAssertion( "cell") AnnotationAssertion( "CL:0002367") AnnotationAssertion(rdfs:label "trabecular meshwork cell") SubClassOf( ) # Class: (cardiocyte) AnnotationAssertion( "A cell located in the heart, including both muscle and non muscle cells.") AnnotationAssertion( "tmeehan") AnnotationAssertion( "2010-12-07T09:37:22Z") AnnotationAssertion( "BTO:0001539") AnnotationAssertion( "CALOHA:TS-0115") AnnotationAssertion( "FMA:83808") AnnotationAssertion( "FMA:84791") AnnotationAssertion( "heart cell") AnnotationAssertion( "cell") AnnotationAssertion( "CL:0002494") AnnotationAssertion(rdfs:comment "From Onard of the FMA: Cardiac muscle cell or cardiac myocyte is a striated muscle cell. Cardiocyte on the other hand is any cell in the heart which includes cells other than muscle cells (e.g. endothelial cell of endocardium). Unless there is a consensus among anatomists that cardiocytes refer only to muscle cells, we will treat them as a general class of cells in the heart.") AnnotationAssertion(rdfs:label "cardiocyte") SubClassOf( ) # Class: (spongiotrophoblast cell) AnnotationAssertion( "A trophoblast cell that arises in the junctional zone (basal plate) of the placenta.") AnnotationAssertion( "tmeehan") AnnotationAssertion( "2010-12-07T12:56:56Z") AnnotationAssertion( "cell") AnnotationAssertion( "CL:0002499") AnnotationAssertion(rdfs:label "spongiotrophoblast cell") SubClassOf( ) # Class: (Schwann cell) AnnotationAssertion( "A glial cell that ensheathes axons of neuron in the peripheral nervous system and are necessary for their maintainance and function.") AnnotationAssertion( "tmeehan") AnnotationAssertion( "2011-03-02T01:19:27Z") AnnotationAssertion( "BTO:0001220") AnnotationAssertion( "CALOHA:TS-0898") AnnotationAssertion( "cell") AnnotationAssertion( "CL:0002573") AnnotationAssertion(rdfs:label "Schwann cell") SubClassOf( ) # Class: (otic fibrocyte) AnnotationAssertion( "A fibrocyte of the cochlea that has specialized structural and molecular adaptions.") AnnotationAssertion( "tmeehan") AnnotationAssertion( "2011-07-11T03:35:01Z") AnnotationAssertion( "cell") AnnotationAssertion( "CL:0002665") AnnotationAssertion(rdfs:label "otic fibrocyte") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (retinal progenitor cell) AnnotationAssertion( "A multi-fate stem cell that can give rise to different retinal cell types including rod and cone cells.") AnnotationAssertion( "tmeehan") AnnotationAssertion( "2011-08-16T02:38:01Z") AnnotationAssertion( "cell") AnnotationAssertion( "CL:0002672") AnnotationAssertion(rdfs:label "retinal progenitor cell") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (spinal cord interneuron) AnnotationAssertion( "A CNS interneuron located in the spinal cord.") AnnotationAssertion( "cell") AnnotationAssertion( "CL:0005000") AnnotationAssertion(rdfs:comment "Is_a interneuron, part_of UBERON:0002240.") AnnotationAssertion(rdfs:label "spinal cord interneuron") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (renal principal cell) AnnotationAssertion( "A cuboidal epithelial cell of the kidney which regulates sodium and potassium balance. The activity of sodium and potassium channels on the cells apical membrane is regulated by aldosterone and vasopressin. In mammals these cells are located in the renal collecting ducts.") AnnotationAssertion( "cell") AnnotationAssertion( "CL:0005009") AnnotationAssertion(rdfs:label "renal principal cell") SubClassOf( ) # Class: (skeletogenic cell) AnnotationAssertion( "Cell that has the potential to form a skeletal cell type (e.g. cells in periosteum, cells in marrow) and produce extracellular matrix (often mineralized) and skeletal tissue (often mineralized).") AnnotationAssertion( "haendel") AnnotationAssertion( "2012-06-15T02:51:27Z") AnnotationAssertion( "scleroblast") AnnotationAssertion( "cell") AnnotationAssertion( "CL:0007001") AnnotationAssertion(rdfs:comment "Needs logical definition. Should be capable_of skeletal system morphogenesis? or skeletal tissue development? needs to be added to GO. NOTES:a cell type of the early embryo (see also: mesenchymal cells) that will give rise to mineralized connective tissue. Scleroblasts can differentiate into osteoblasts (bone-forming cells), chondroblasts (cartilage-forming cells), odontoblasts (dentin-forming cells), ameloblasts (enamel-forming cells). The mesenchymal cells developing into osteoblasts and chondroblasts are derived from the mesoderm. Those developing into odontoblasts are neural crest cells. Those developing into ameloblasts are derived from the ectoderm. (http://www.copewithcytokines.de/cope.cgi?key=scleroblasts)") AnnotationAssertion(rdfs:label "skeletogenic cell") SubClassOf( ) # Class: (precementoblast) AnnotationAssertion( "Skeletogenic cell that has the potential to develop into a cementoblast.") AnnotationAssertion( "haendel") AnnotationAssertion( "2012-06-15T04:37:13Z") AnnotationAssertion( "cell") AnnotationAssertion( "CL:0007002") AnnotationAssertion(rdfs:label "precementoblast") SubClassOf( ) # Class: (preodontoblast) AnnotationAssertion( "Skeletogenic cell that has the potential to form an odontoblast, deposits predentine, and arises from a cranial neural crest cell.") AnnotationAssertion( "haendel") AnnotationAssertion( "2012-06-15T05:15:11Z") AnnotationAssertion( "cell") AnnotationAssertion( "CL:0007003") AnnotationAssertion(rdfs:label "preodontoblast") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (preosteoblast) AnnotationAssertion( "Skeletogenic cell that has the potential to transform into an osteoblast, and develops from neural crest or mesodermal cells.") AnnotationAssertion( "haendel") AnnotationAssertion( "2012-06-27T10:57:21Z") AnnotationAssertion( "osteoprogenitor cell") AnnotationAssertion( "cell") AnnotationAssertion( "CL:0007010") AnnotationAssertion(rdfs:label "preosteoblast") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (skeletal muscle fiber) AnnotationAssertion( "A transversely striated, synctial cell of skeletal muscle. It is formed when proliferating myoblasts exit the cell cycle, differentiate and fuse.") AnnotationAssertion( "CL:0008002") AnnotationAssertion(rdfs:label "skeletal muscle fiber") SubClassOf( ) SubClassOf( ) SubClassOf( ) # Class: (somatic muscle myotube) AnnotationAssertion( "A myotube that is part of some somatic muscle. Examples include arthropod somatic muscle cells.") AnnotationAssertion( "CL:0008003") AnnotationAssertion(rdfs:label "somatic muscle myotube") SubClassOf( ) SubClassOf( ) # Class: (obliquely striated somatic muscle cell) AnnotationAssertion( "A somatic muscle cell that is oblquely striated. Examples include the somatic muscles of nematodes.") AnnotationAssertion( "CL:0008005") AnnotationAssertion(rdfs:label "obliquely striated somatic muscle cell") SubClassOf( ) SubClassOf( ) # Class: (mesenchymal cell) AnnotationAssertion( "A non-polarised cell precursor cell that is part of some mesenchyme, is associated with the cell matrix but is not connected to other cells and is capable of migration.") AnnotationAssertion( "mesenchyme cell") AnnotationAssertion( "CL:0008019") AnnotationAssertion(rdfs:label "mesenchymal cell") SubClassOf( ) # Class: (coronet cell) AnnotationAssertion( "A highly specialized cell type exclusive to and forming neuroepithelium of the Saccus vasculosus, covering the caudal diverticulum of the infundibular recess.") AnnotationAssertion( "CL:0010015") AnnotationAssertion(rdfs:comment "Editor note: remember to link to Saccus vasculosus in next uberon release") AnnotationAssertion(rdfs:label "coronet cell") SubClassOf( ) # Class: (magnocellular neurosecretory cell) AnnotationAssertion( "A neurosecretory neuron residing mainly in the hypothalamic supraoptic and paraventricular nuclei and in a number of smaller accessory cell groups between these two nuclei, that is capable of secreting the hormones oxytocin or vasopressin, and sometimes both, into the systemic circulation.") AnnotationAssertion( "https://orcid.org/0000-0001-7258-9596") AnnotationAssertion( ) AnnotationAssertion( "ILX:0107463") AnnotationAssertion( "magnocellular neuron") AnnotationAssertion( "CL:0011003") AnnotationAssertion(rdfs:label "magnocellular neurosecretory cell") SubClassOf( ) SubClassOf( ) # Class: (lens fiber cell) AnnotationAssertion( "A vetebrate lens cell that is any of the elongated, tightly packed cells that make up the bulk of the mature lens in a camera-type eye.") AnnotationAssertion( "lens fibre cell") AnnotationAssertion( "CL:0011004") AnnotationAssertion(rdfs:label "lens fiber cell") SubClassOf( ) # Class: (trophectodermal cell) AnnotationAssertion( "trophectoderm cell") AnnotationAssertion( "cell") AnnotationAssertion( "CL:1000274") AnnotationAssertion(rdfs:label "trophectodermal cell") SubClassOf( ) # Class: (fibroblast of areolar connective tissue) AnnotationAssertion( "A fibroblast that is part of the areolar connective tissue.") AnnotationAssertion( "FMA:261279") AnnotationAssertion( "cell") AnnotationAssertion( "CL:1000303") AnnotationAssertion(rdfs:label "fibroblast of areolar connective tissue") SubClassOf( ) # Class: (fibroblast of tunica adventitia of artery) AnnotationAssertion( "A fibroblast that is part of the tunica adventitia of artery.") AnnotationAssertion( "FMA:261285") AnnotationAssertion( "cell") AnnotationAssertion( "CL:1000306") AnnotationAssertion(rdfs:label "fibroblast of tunica adventitia of artery") SubClassOf( ) # Class: (epicardial adipocyte) AnnotationAssertion( "A fat cell that is part of the epicardial fat.") AnnotationAssertion( "FMA:261293") AnnotationAssertion( "adipocyte of epicardial fat") AnnotationAssertion( "epicardial fat cell") AnnotationAssertion( "cell") AnnotationAssertion( "CL:1000309") AnnotationAssertion(rdfs:label "epicardial adipocyte") SubClassOf( ) SubClassOf( ) # Class: (type 1 vestibular sensory cell of epithelium of macula of utricle of membranous labyrinth) AnnotationAssertion( "A type I vestibular sensory cell that is part of the epithelium of macula of utricle of membranous labyrinth.") AnnotationAssertion( "FMA:263188") AnnotationAssertion( "cell") AnnotationAssertion( "CL:1000379") AnnotationAssertion(rdfs:label "type 1 vestibular sensory cell of epithelium of macula of utricle of membranous labyrinth") SubClassOf( ) SubClassOf( ) # Class: (type 1 vestibular sensory cell of epithelium of macula of saccule of membranous labyrinth) AnnotationAssertion( "A type I vestibular sensory cell that is part of the epithelium of macula of saccule of membranous labyrinth.") AnnotationAssertion( "FMA:263190") AnnotationAssertion( "cell") AnnotationAssertion( "CL:1000380") AnnotationAssertion(rdfs:label "type 1 vestibular sensory cell of epithelium of macula of saccule of membranous labyrinth") SubClassOf( ) SubClassOf( ) # Class: (type 2 vestibular sensory cell of epithelium of macula of utricle of membranous labyrinth) AnnotationAssertion( "A type II vestibular sensory cell that is part of the epithelium of macula of utricle of membranous labyrinth.") AnnotationAssertion( "FMA:263196") AnnotationAssertion( "cell") AnnotationAssertion( "CL:1000383") AnnotationAssertion(rdfs:label "type 2 vestibular sensory cell of epithelium of macula of utricle of membranous labyrinth") SubClassOf( ) SubClassOf( ) # Class: (type 2 vestibular sensory cell of epithelium of macula of saccule of membranous labyrinth) AnnotationAssertion( "A type II vestibular sensory cell that is part of the epithelium of macula of saccule of membranous labyrinth.") AnnotationAssertion( "FMA:263198") AnnotationAssertion( "cell") AnnotationAssertion( "CL:1000384") AnnotationAssertion(rdfs:label "type 2 vestibular sensory cell of epithelium of macula of saccule of membranous labyrinth") SubClassOf( ) SubClassOf( ) # Class: (myocyte of sinoatrial node) AnnotationAssertion( "A muscle cell that is part of the sinoatrial node.") AnnotationAssertion( "FMA:67102") AnnotationAssertion( "SA nodal myocyte") AnnotationAssertion( "SA node cardiac muscle cell") AnnotationAssertion( "myocyte of sinoatrial node") AnnotationAssertion( "sinoatrial node cell") AnnotationAssertion( "sinoatrial node myocyte") AnnotationAssertion( "sinuatrial node myocyte") AnnotationAssertion( "cell") AnnotationAssertion( "CL:1000409") AnnotationAssertion(rdfs:label "myocyte of sinoatrial node") SubClassOf( ) # Class: (myocyte of atrioventricular node) AnnotationAssertion( "A muscle cell that is part of the atrioventricular node.") AnnotationAssertion( "FMA:67106") AnnotationAssertion( "AV nodal myocyte") AnnotationAssertion( "AV node cardiac muscle cell") AnnotationAssertion( "AV node cell") AnnotationAssertion( "atrioventricular node cell") AnnotationAssertion( "atrioventricular node myocyte") AnnotationAssertion( "cell") AnnotationAssertion( "CL:1000410") AnnotationAssertion(rdfs:label "myocyte of atrioventricular node") SubClassOf( ) # Class: (chromaffin cell of adrenal gland) AnnotationAssertion( "A chromaffin cell that is part of the adrenal gland.") AnnotationAssertion( "FMA:69794") AnnotationAssertion( "adrenal chromaffin cell") AnnotationAssertion( "cell") AnnotationAssertion( "CL:1000426") AnnotationAssertion(rdfs:label "chromaffin cell of adrenal gland") SubClassOf( ) SubClassOf( ) # Class: (adrenal cortex chromaffin cell) AnnotationAssertion( "A chromaffin cell that is part of the adrenal cortex.") AnnotationAssertion( "FMA:69795") AnnotationAssertion( "chromaffin cell of adrenal cortex") AnnotationAssertion( "cell") AnnotationAssertion( "CL:1000427") AnnotationAssertion(rdfs:comment "Not clear this cell type exists. Can't call it a cortical adrenal cell because of different germ layer origin.") AnnotationAssertion(rdfs:label "adrenal cortex chromaffin cell") SubClassOf( ) # Class: (smooth muscle cell of prostate) AnnotationAssertion( "A smooth muscle cell that is part of the prostate gland.") AnnotationAssertion( "FMA:84583") AnnotationAssertion( "smooth muscle fiber of prostate") AnnotationAssertion( "cell") AnnotationAssertion( "CL:1000487") AnnotationAssertion(rdfs:label "smooth muscle cell of prostate") SubClassOf( ) # Class: (cholangiocyte) AnnotationAssertion( "An epithelial cell that is part of the bile duct. Cholangiocytes contribute to bile secretion via net release of bicarbonate and water. They are cuboidal epithelium in the small interlobular bile ducts, but become columnar and mucus secreting in larger bile ducts approaching the porta hepatis and the extrahepatic ducts.") AnnotationAssertion( "FMA:86481") AnnotationAssertion( "epithelial cell of bile duct") AnnotationAssertion( "cell") AnnotationAssertion( "CL:1000488") AnnotationAssertion(rdfs:label "cholangiocyte") SubClassOf( ) # Class: (kidney interstitial fibroblast) AnnotationAssertion( "KUPO:0001102") AnnotationAssertion( "cell") AnnotationAssertion( "CL:1000692") AnnotationAssertion(rdfs:label "kidney interstitial fibroblast") SubClassOf( ) # Class: (parvocellular neurosecretory cell) AnnotationAssertion( "The secretory neurons of the paraventricular nucleus that synthesize and secrete vasopressin, corticotropin-releasing factor (CRF) and thyrotropin-releasing hormone (TRH) into blood vessels in the hypothalamo-pituitary portal system.") AnnotationAssertion( "parvocellular neuron") AnnotationAssertion( "parvocellular neurosecretory neuron") AnnotationAssertion( "cl") AnnotationAssertion( "CL:1001505") AnnotationAssertion(rdfs:label "parvocellular neurosecretory cell") SubClassOf( ) SubClassOf( ) # Class: (processual entity) AnnotationAssertion(Annotation( "span:ProcessualEntity") "An occurrent [span:Occurrent] that exists in time by occurring or happening, has temporal parts and always involves and depends on some entity.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0000000") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "processual entity") DisjointClasses( ) # Class: (uterine cervix) AnnotationAssertion(Annotation( ) Annotation( ) "Lower, narrow portion of the uterus where it joins with the top end of the vagina.") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001359") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( ) "The narrow caudal end of the uterus that opens into the vagina. [TFD][VHOG]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001359") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "DOI:10.1098/rspb.2004.2848 Lynch VJ, Roth JJ, Takahashi K, Dunn CW, Nonaka DF, Stopper GF, Wagner GP, Adaptive evolution of HoxA-11 and HoxA-13 at the origin of the uterus in mammals. Proceedings of the Royal Society of London, Series B (2004)") "The evolution of mammals is associated with radical changes in their reproductive biology, particularly the structure and function of the female reproductive organs. These changes include the evolution of the uterus, cervix, vagina, placenta and specialized cell types associated with each of those structures.[well established][VHOG]") AnnotationAssertion( "cervical") AnnotationAssertion(Annotation( "EFO:0000979") "cervix") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0001421") AnnotationAssertion( "BTO:0002249") AnnotationAssertion( "CALOHA:TS-0134") AnnotationAssertion( "EFO:0000979") AnnotationAssertion( "EMAPA:29927") AnnotationAssertion( "EV:0100114") AnnotationAssertion( "FMA:17740") AnnotationAssertion( "GAID:376") AnnotationAssertion( "MA:0000392") AnnotationAssertion( "MAT:0000292") AnnotationAssertion( "MESH:D002584") AnnotationAssertion( "NCIT:C12311") AnnotationAssertion( "OpenCyc:Mx4rvVipEJwpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Cervix") "UMLS:C0007874") AnnotationAssertion( "VHOG:0001359") AnnotationAssertion( "galen:CervixUteri") AnnotationAssertion(Annotation( "FMA:17740") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "canalis cervicis uteri") AnnotationAssertion( "caudal segment of uterus") AnnotationAssertion(Annotation( "FMA:17740") "cervical canal of uterus") AnnotationAssertion(Annotation( "EMAPA:29927") Annotation( ) "cervix uteri") AnnotationAssertion(Annotation( "FMA:17740") "neck of uterus") AnnotationAssertion(Annotation( "FMA:17740") "uterine cervix") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:17740") "cervical canal") AnnotationAssertion(Annotation( "BTO:0001421") "cervix of uterus") AnnotationAssertion( "UBERON:0000002") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "uterine cervix") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (naris) AnnotationAssertion(Annotation( ) "Orifice of the olfactory system. The naris is the route by which odorants enter the olfactory system[MAH].") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0000311") Annotation( "AAO"^^xsd:string) Annotation( "AAO:EJS"^^xsd:string) "One of paired external openings of the nasal chamber.[AAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000663") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "DOI:10.1038/nature02843 Zhu M, Ahlberg PE, The origin of the internal nostril in tetrapodes. Nature (2004)") "Naris refer to the external and interior naris (choana) of tetrapods, and to anterior and posterior naris of zebrafish. It seems now accepted that the structure is homologous: The choana, a unique 'internal nostril' opening from the nasal sac into the roof of the mouth, is a key part of the tetrapod (land vertebrate) respiratory system. It was the first component of the tetrapod body plan to evolve, well before the origin of limbs, and is therefore crucial to our understanding of the beginning of the fish-tetrapod transition. (...) Here we present new material of Kenichthys, a 395-million-year-old fossil fish from China, that provides direct evidence for the origin of the choana and establishes its homology: it is indeed a displaced posterior external nostril that, during a brief transitional stage illustrated by Kenichthys, separated the maxilla from the premaxilla.[well established][VHOG]") AnnotationAssertion( "in actinopterygians, both pairs of nares are external. In tetrapods, the exhalant empties into the buccal cavity") AnnotationAssertion(Annotation( "FMA"^^xsd:string) "we have classified this as an orifice, according to FMA. Note that in FMA, orifices are immaterial entities, but in ZFA this is a surface structure") AnnotationAssertion( ) AnnotationAssertion( "AAO:0000311") AnnotationAssertion( "EHDAA2:0001225") AnnotationAssertion( "EHDAA:9083") AnnotationAssertion( "EMAPA:17847") AnnotationAssertion( "MA:0000282") AnnotationAssertion( "VHOG:0000663") AnnotationAssertion( "galen:Naris") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0000003") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "naris") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "ZFA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (nose) AnnotationAssertion(Annotation( "UBERON:cjm"^^xsd:string) "The olfactory organ of vertebrates, consisting of nares, olfactory epithelia and the structures and skeletal framework of the nasal cavity.") AnnotationAssertion(Annotation( "ZFA:0000047") "Organ that is the specialized structure of the face that contains olfactory neurons. The peripheral olfactory organ is paired[ZFA:0000047].") AnnotationAssertion(Annotation( ) "a protuberance in vertebrates that houses the nostrils, or nares, which admit and expel air for respiration in conjunction with the mouth. Behind the nose are the olfactory mucosa and the sinuses. Behind the nasal cavity, air next passes through the pharynx, shared with the digestive system, and then into the rest of the respiratory system. In humans, the nose is located centrally on the face; on most other mammals, it is on the upper tip of the snout[WP]. GO: The nose is the specialized structure of the face that serves as the organ of the sense of smell and as part of the respiratory system. Includes the nasi externus (external nose) and cavitas nasi (nasal cavity)[Wikipedia:Nose].") AnnotationAssertion(Annotation( "MP:0002233") "the organ that is specialized for smell and is part of the respiratory system") AnnotationAssertion( "the structure of the nose varies across vertebrates. In tetrapods the nose is part of the respiratory system.[PMID:25312359]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0000840") AnnotationAssertion( "CALOHA:TS-2037") AnnotationAssertion( "EHDAA2:0001274") AnnotationAssertion( "EHDAA:1502") AnnotationAssertion( "EMAPA:16542") AnnotationAssertion( "EV:0100037") AnnotationAssertion( "EV:0100370") AnnotationAssertion( "FMA:46472") AnnotationAssertion( "GAID:77") AnnotationAssertion( "MA:0000281") AnnotationAssertion( "MAT:0000139") AnnotationAssertion( "MESH:D009666") AnnotationAssertion( "MIAA:0000139") AnnotationAssertion( "NCIT:C12756") AnnotationAssertion( "OpenCyc:Mx4rvViCbJwpEbGdrcN5Y29ycA") AnnotationAssertion( "TAO:0000047") AnnotationAssertion(Annotation( "ncithesaurus:Nose") "UMLS:C0028429") AnnotationAssertion( "ZFA:0000047") AnnotationAssertion( "galen:Nose") AnnotationAssertion(Annotation( "ZFA:0000047") Annotation( ) "nasal sac") AnnotationAssertion(Annotation( "MA:0000281") Annotation( ) "nose") AnnotationAssertion(Annotation( "ZFA:0000047") "peripheral olfactory organ") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "nasus") AnnotationAssertion(Annotation( "UBERON:cjm"^^xsd:string) "olfactory apparatus") AnnotationAssertion( "proboscis") AnnotationAssertion( "UBERON:0000004") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "nose") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/d/d0/Canine-nose.jpg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) Annotation( "ZFA-def") ObjectSomeValuesFrom( )) SubClassOf(Annotation( "ZFA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (chemosensory organ) AnnotationAssertion( "FBbt:00005157") AnnotationAssertion(Annotation( "FBbt:00005157") "chemosensory sensory organ") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0000005") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "chemosensory organ") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (islet of Langerhans) AnnotationAssertion(Annotation( "MA:0000127") Annotation( "MESH:A03.734.414") Annotation( "MP:0005215") "The clusters of hormone-producing cells that are scattered throughout the pancreas.") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0010406") Annotation( "AAO"^^xsd:string) Annotation( "AAO:BJB"^^xsd:string) "Anatomical structure which consists of glands developed from pancreatic ducts in the larvae and secrete insulin.[AAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000646") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "PMID:7600975 Slack JMW, Developmental biology of the pancreas. Development (1995)") "Mammals, birds, reptiles and amphibians have a pancreas with similar histology and mode of development, while in some fish, the islet cells are segregated as Brockmann bodies.[well established][VHOG]") AnnotationAssertion(Annotation( ) "A primitive exocrine pancreas can be found in holocephalan cartilaginous fish; a pancreatic duct directly ending in the gut lumen is connected to a glandular structure made of exocrine cells and associated with cell islets, which comprises three different hormone-producing cell types: insulin, somatostatin and glucagon (Yui and Fujita, 1986)") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010406") AnnotationAssertion( "BTO:0000991") AnnotationAssertion( "CALOHA:TS-0741") AnnotationAssertion( "EFO:0000856") AnnotationAssertion( "EMAPA:32927") AnnotationAssertion( "EV:0100130") AnnotationAssertion( "FMA:16016") AnnotationAssertion( "GAID:324") AnnotationAssertion( "MA:0000127") AnnotationAssertion( "MAT:0000076") AnnotationAssertion( "MESH:D007515") AnnotationAssertion( "MIAA:0000076") AnnotationAssertion( "NCIT:C12608") AnnotationAssertion(Annotation( "ncithesaurus:Islet_of_Langerhans") "UMLS:C0022131") AnnotationAssertion( "VHOG:0000646") AnnotationAssertion( "XAO:0000159") AnnotationAssertion( "pancreatic insula") AnnotationAssertion( "pancreatic islet") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0000991") "island of Langerhans") AnnotationAssertion(Annotation( "BTO:0000991") "island of pancreas") AnnotationAssertion( "islets of Langerhans") AnnotationAssertion( "UBERON:0000006") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "islet of Langerhans") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/9/99/Gray1105.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pituitary gland) AnnotationAssertion(Annotation( ) Annotation( "ZFIN:curator"^^xsd:string) "The pituitary gland is an endocrine gland that secretes hormones that regulate many other glands [GO]. An endocrine gland located ventral to the diencephalon and derived from mixed neuroectodermal and non neuroectodermal origin [ZFIN].") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0010536") Annotation( "AAO"^^xsd:string) Annotation( "AAO:BJB"^^xsd:string) "An endocrine gland derived from infundibulum of the floor of the diencephalon and an ectodermal dorsal protrusion from the buccal cavity which controls the secretion of many hormones influencing the function of various organs of the body.[AAO]") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0000118") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "An endocrine gland located ventral to the diencephalon and derived from mixed neuroectodermal and non neuroectodermal origin.[TAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000143") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0030223693 Liem KF, Bemis WE, Walker WF, Grande L, Functional Anatomy of the Vertebrates: An Evolutionary Perspective (2001) p.510") "It (the hypophysis) develops embryonically in all vertebrates from two ectodermal evaginations that meet and unite. (...) A well-developed hypophyseal system with functional connections to the hypothalamus is unique to craniates.[well established][VHOG]") AnnotationAssertion( "The lamprey possesses a distinct pituitary organ and hormones, the ascidian does not show distinct evidence of them [Sower S, Freamat M, Kavanaugh S. The origins of the vertebrate hypothalamic-pituitary-gonadal (HPG) and hypothalamic-pituitary-thyroid (HPT) endocrine systems: new insights from lampreys. Gen Comp Endocrinol 2009;161:20-9]") AnnotationAssertion(Annotation( "BIRNLEX:1353") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "Hp") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010536") AnnotationAssertion( "BAMS:PIT") AnnotationAssertion( "BAMS:Pit") AnnotationAssertion( "BIRNLEX:1353") AnnotationAssertion( "BM:Die-Hy-HY") AnnotationAssertion( "BTO:0001073") AnnotationAssertion( "CALOHA:TS-0798") AnnotationAssertion( "DHBA:10505") AnnotationAssertion( "EFO:0000857") AnnotationAssertion( "EHDAA2:0001471") AnnotationAssertion( "EHDAA:2183") AnnotationAssertion( "EHDAA:4477") AnnotationAssertion( "EMAPA:35998") AnnotationAssertion( "EV:0100132") AnnotationAssertion( "FMA:13889") AnnotationAssertion( "GAID:457") AnnotationAssertion( "HBA:4634") AnnotationAssertion( "MA:0000176") AnnotationAssertion( "MAT:0000077") AnnotationAssertion( "MESH:D010902") AnnotationAssertion( "MIAA:0000077") AnnotationAssertion( "NCIT:C12399") AnnotationAssertion( "OpenCyc:Mx4rv6NQYJwpEbGdrcN5Y29ycA") AnnotationAssertion( "TAO:0000118") AnnotationAssertion(Annotation( "BIRNLEX:1353") "UMLS:C0032005") AnnotationAssertion(Annotation( "ncithesaurus:Pituitary_Gland") "UMLS:C0032005") AnnotationAssertion( "VHOG:0000143") AnnotationAssertion( "XAO:0000017") AnnotationAssertion( "ZFA:0000118") AnnotationAssertion(Annotation( "BIRNLEX:1353") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=399") AnnotationAssertion(Annotation( ) Annotation( ) "glandula pituitaria") AnnotationAssertion(Annotation( "BTO:0001073") "pituitary") AnnotationAssertion(Annotation( "BTO:0001073") "pituitary body") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "ZFA:0000118") "hypophysis") AnnotationAssertion(Annotation( "MA:0000176") "hypophysis cerebri") AnnotationAssertion( "UBERON:0000007") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "Terminology note: hypophysis and pituitary gland are often used informally as synonyms, but the hypophysis also includes the small infundibular or pituitary stalk[Neumann 2020]") AnnotationAssertion(rdfs:label "pituitary gland") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/9/97/Gray1180.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "ZFA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "ZFA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "BGEE:ANN") ObjectSomeValuesFrom( )) # Class: (submucosa) AnnotationAssertion(Annotation( ) "A layer of dense irregular connective tissue that lines organs and supports the mucosa, as well as joins the mucosa to the bulk of underlying smooth muscle. [WP,unvetted].") AnnotationAssertion( "submucosal") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0002107") AnnotationAssertion( "FMA:85391") AnnotationAssertion( "FMA:85392") AnnotationAssertion( "NCIT:C13167") AnnotationAssertion(Annotation( "ncithesaurus:Submucosa") "UMLS:C0225344") AnnotationAssertion(Annotation( "FMA:85391") "organ submucosa") AnnotationAssertion(Annotation( "FMA:85392") "region of submucosa") AnnotationAssertion(Annotation( "FMA:85391") "submucosa of organ") AnnotationAssertion(Annotation( "FMA:85392") "submucosa of region of organ") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0002107") "submucous layer") AnnotationAssertion(Annotation( "BTO:0002107") "tela submucosa") AnnotationAssertion( "tunica submucosa") AnnotationAssertion( "UBERON:0000009") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "submucosa") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/4/4e/Ens.png"^^xsd:anyURI) AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/en/thumb/4/4e/Ens.png/200px-Ens.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (peripheral nervous system) AnnotationAssertion(Annotation( "GO:0007422") "A major division of the nervous system that contains nerves which connect the central nervous system (CNS) with sensory organs, other organs, muscles, blood vessels and glands.") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0000142") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "Nervous structures including ganglia outside of the central nervous system. Kimmel et al, 1995.[TAO]") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0000429") Annotation( "AAO"^^xsd:string) Annotation( "AAO:BJB"^^xsd:string) "Part of nervous system in which nerves extend throughout the body outside of the brain and spinal cord.[AAO]") AnnotationAssertion(Annotation( ) "The peripheral nervous system (PNS) is the part of the nervous system connected to the CNS which contains cranial nerves III - XII, spinal, peripheral and autonomic nerves. (CUMBO)") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000399") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "DOI:10.1007/978-0-387-46954-6_6 Dupin E, Creuzet S, Le Douarin NM, The contribution of the neural crest to the vertebrate body. Advances in experimental medicine and biology (2006)") "(...) specific vertebrate traits within the chordate phylum such as skeletal tissues, PNS, and spectacular head and brain development, are linked to the NC (neural crest) and its derivatives.[well established][VHOG]") AnnotationAssertion(Annotation( ) "PNS") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0000429") AnnotationAssertion( "BAMS:PNS") AnnotationAssertion( "BILA:0000081") AnnotationAssertion( "BIRNLEX:1111") AnnotationAssertion( "BTO:0001028") AnnotationAssertion( "CALOHA:TS-0808") AnnotationAssertion( "EFO:0000891") AnnotationAssertion( "EHDAA2:0001445") AnnotationAssertion( "EHDAA:2893") AnnotationAssertion( "EMAPA:16665") AnnotationAssertion( "EV:0100335") AnnotationAssertion( "FBbt:00005098") AnnotationAssertion( "FMA:9903") AnnotationAssertion( "GAID:715") AnnotationAssertion( "MA:0000218") AnnotationAssertion( "MAT:0000338") AnnotationAssertion( "MESH:D017933") AnnotationAssertion( "MIAA:0000338") AnnotationAssertion( "NCIT:C12465") AnnotationAssertion( "TAO:0000142") AnnotationAssertion(Annotation( "BIRNLEX:1111") "UMLS:C0206417") AnnotationAssertion(Annotation( "ncithesaurus:Peripheral_Nervous_System") "UMLS:C0206417") AnnotationAssertion(Annotation( "BIRNLEX:1111") "UMLS:C1305921") AnnotationAssertion( "VHOG:0000399") AnnotationAssertion( "XAO:0000178") AnnotationAssertion( "ZFA:0000142") AnnotationAssertion(Annotation( ) Annotation( "FMA:9903") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "pars peripherica") AnnotationAssertion(Annotation( ) Annotation( "FMA:9903") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "systema nervosum periphericum") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0000010") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "peripheral nervous system") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/b/ba/Nervous_system_diagram.png"^^xsd:anyURI) SubClassOf(Annotation( "cjm"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (parasympathetic nervous system) AnnotationAssertion(Annotation( "GO:0048486") "The parasympathetic nervous system is one of the two divisions of the vertebrate autonomic nervous system. Parasympathetic nerves emerge cranially as pre ganglionic fibers from oculomotor, facial, glossopharyngeal and vagus and from the sacral region of the spinal cord. Most neurons are cholinergic and responses are mediated by muscarinic receptors. The parasympathetic system innervates, for example: salivary glands, thoracic and abdominal viscera, bladder and genitalia[GO].") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0010488") Annotation( "AAO"^^xsd:string) Annotation( "AAO:BJB"^^xsd:string) "Part of the autonomic nervous system which has opposing physiological effects of the sympathetic nervous system. Examples include decreasing the heart rate or dilating the blood vessels.[AAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000755") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0072528305 Kardong KV, Vertebrates: Comparative Anatomy, Function, Evolution (2006) p.634, DOI:10.1016/S0306-4530(98)00057-2 Porges SW, Love: an emergent property of the mammalian autonomic nervous system. Psychoneuroendocrinology (1998)") "In mammals, the autonomic nervous system is divided into two contrasting, antagonistic systems of control over visceral activity: the sympathetic system and the parasympathetic system (reference 1); In general, the teleosts may be considered phylogenetically the first class of vertebrates in which the heart is regulated by both sympathetic and parasympathetic neural pathways (reference 2).[well established][VHOG]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010488") AnnotationAssertion( "BIRNLEX:2517") AnnotationAssertion( "BTO:0001833") AnnotationAssertion( "CALOHA:TS-2094") AnnotationAssertion( "EFO:0000894") AnnotationAssertion( "EHDA:10096") AnnotationAssertion( "EHDAA2:0001402") AnnotationAssertion( "EHDAA:4655") AnnotationAssertion( "EMAPA:17270") AnnotationAssertion( "FMA:9907") AnnotationAssertion( "GAID:708") AnnotationAssertion( "MA:0000223") AnnotationAssertion( "MAT:0000101") AnnotationAssertion( "MESH:D010275") AnnotationAssertion( "MIAA:0000101") AnnotationAssertion( "NCIT:C12764") AnnotationAssertion( "TAO:0001575") AnnotationAssertion(Annotation( "BIRNLEX:2517") "UMLS:C0030510") AnnotationAssertion(Annotation( "ncithesaurus:Parasympathetic_Nervous_System") "UMLS:C0030510") AnnotationAssertion(Annotation( "BIRNLEX:2517") "UMLS:C1305770") AnnotationAssertion( "VHOG:0000755") AnnotationAssertion( "ZFA:0001575") AnnotationAssertion( "PNS - parasympathetic") AnnotationAssertion( "parasympathetic part of autonomic division of nervous system") AnnotationAssertion(Annotation( "FMA:9907") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "pars parasympathica divisionis autonomici systematis nervosi") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "pars parasympathica divisionis autonomici systematis nervosi") AnnotationAssertion( "UBERON:0000011") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "parasympathetic nervous system") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/f/f7/Gray839.png"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "cjm"^^xsd:string) ) SubClassOf(Annotation( "FMA"^^xsd:string) Annotation( "MA"^^xsd:string) Annotation( "WP"^^xsd:string) Annotation( "ZFA-modified-from-isa") ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (somatic nervous system) AnnotationAssertion(Annotation( "NLXANAT:100301") "Part of peripheral nervous system that includes the somatic parts of the cranial and spinal nerves and their ganglia and the peripheral sensory receptors.") AnnotationAssertion( ) AnnotationAssertion( "EFO:0000892") AnnotationAssertion( "FMA:9904") AnnotationAssertion( "MA:0002850") AnnotationAssertion( "MAT:0000099") AnnotationAssertion( "MIAA:0000099") AnnotationAssertion( "NLXANAT:100301") AnnotationAssertion( "PNS - somatic") AnnotationAssertion(Annotation( "NLXANAT:100301") "somatic nervous system, somatic division") AnnotationAssertion(Annotation( "UBERON:cjm"^^xsd:string) "somatic part of peripheral nervous system") AnnotationAssertion(Annotation( "NLXANAT:100301") "somatic peripheral nervous system") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0000012") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "somatic nervous system") SubClassOf(Annotation( "cjm"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (sympathetic nervous system) AnnotationAssertion(Annotation( "GO:0048485") "The sympathetic nervous system is one of the two divisions of the vertebrate autonomic nervous system (the other being the parasympathetic nervous system). The sympathetic preganglionic neurons have their cell bodies in the thoracic and lumbar regions of the spinal cord and connect to the paravertebral chain of sympathetic ganglia. Innervate heart and blood vessels, sweat glands, viscera and the adrenal medulla. Most sympathetic neurons, but not all, use noradrenaline as a post-ganglionic neurotransmitter [GO].") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0010487") Annotation( "AAO"^^xsd:string) Annotation( "AAO:BJB"^^xsd:string) "Part of the autonomic nervous system which has opposing physiological effects of the parasympathetic nervous system. Examples include increasing the heart rate or constricting the blood vessels.[AAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000384") Annotation( "VHOG"^^xsd:string) Annotation( ) "The part of the autonomic nervous system which chiefly contains adrenergic fibres and tends to control and reduce secretions, decrease the contractility and hence the tone of smooth muscles and provoke the contraction of blood vessels. Essentially, it consists of preganglionic fibres from the thoracic and upper lumbar parts of the spinal cord. These fibres, by means of delicate rami communicantes, cross over to ganglia sited in a pair of ganglionated cords on each side of the vertebral column or to more peripheral ganglia. [Dorian_AF, Elsevier's_encyclopaedic_dictionary_of_medicine, Part_B:_Anatomy_(1988)_Amsterdam_etc.:_Elsevier][VHOG]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000384") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0471210054 Butler AB and Hodos W, Comparative vertebrate neuroanatomy: Evolution and Adaptation (2005) p.461-463") "The autonomic nervous system is composed of three divisions: the sympathetic division, the parasympathetic division, and the enteric division. (...) In ray-finned teleost fishes, a sympathetic chain is present, and dual innervation of additional organs can be observed. A similar pattern can be found in amphibians (...). The evolution of the autonomic nervous system has been quite conservative, especially in the tetrapod lineage.[well established][VHOG]") AnnotationAssertion( "has developmental contribution from NC in verteberates (https://github.com/obophenotype/uberon/wiki/The-neural-crest)") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010487") AnnotationAssertion( "BIRNLEX:2516") AnnotationAssertion( "BTO:0001832") AnnotationAssertion( "CALOHA:TS-2050") AnnotationAssertion( "EFO:0000893") AnnotationAssertion( "EHDAA2:0001971") AnnotationAssertion( "EHDAA:3769") AnnotationAssertion( "EMAPA:16985") AnnotationAssertion( "FMA:9906") AnnotationAssertion( "GAID:710") AnnotationAssertion( "MA:0000225") AnnotationAssertion( "MESH:D013564") AnnotationAssertion( "MIAA:0000100") AnnotationAssertion( "NCIT:C12795") AnnotationAssertion( "TAO:0001576") AnnotationAssertion(Annotation( "BIRNLEX:2516") "UMLS:C0039044") AnnotationAssertion(Annotation( "ncithesaurus:Sympathetic_Nervous_System") "UMLS:C0039044") AnnotationAssertion(Annotation( "BIRNLEX:2516") "UMLS:C1269646") AnnotationAssertion( "VHOG:0000384") AnnotationAssertion( "ZFA:0001576") AnnotationAssertion(Annotation( "FMA:9906") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "pars sympathica divisionis autonomici systematis nervosi") AnnotationAssertion( "sympathetic nervous system") AnnotationAssertion( "sympathetic part of autonomic division of nervous system") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "pars sympathica divisionis autonomici systematis nervosi") AnnotationAssertion( "UBERON:0000013") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "sympathetic nervous system") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/7/77/Gray838.png"^^xsd:anyURI) SubClassOf(Annotation( "cjm"^^xsd:string) ) SubClassOf(Annotation( "FMA"^^xsd:string) Annotation( "MA"^^xsd:string) Annotation( "ZFA-modified-from-isa") ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (zone of skin) AnnotationAssertion(Annotation( ) Annotation( ) "Any portion of the organ that covers that body and consists of a layer of epidermis and a layer of dermis.") AnnotationAssertion( "Note the distinction between the entire skin of the body, of which there is only 1 in an organism, and zones of skin, of which there can be many. Examples: skin of knee") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000860") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "DOI:10.1111/j.1469-7580.2008.01043.x Vickaryous MK, Sire JY, The integumentary skeleton of tetrapods: origin, evolution, and development. J Anat (2009)") "(...) it is well-established that neural crest cells contribute to both the dermal skeleton (craniofacial bone, teeth, and the caudal fin rays of teleosts) and the integument, including craniofacial dermis and all pigment cells outside the retina (...).[well established][VHOG]") AnnotationAssertion( "we assume that mouse, HOG and GAID all mean zone of skin when they say skin. We also choose skin as an exact synonym, as it is more intuitive") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0001844") AnnotationAssertion( "EHDAA:6530") AnnotationAssertion( "EMAPA:17525") AnnotationAssertion( "EV:0100152") AnnotationAssertion( "FMA:86166") AnnotationAssertion( "GAID:933") AnnotationAssertion( "MA:0000151") AnnotationAssertion( "MAT:0000284") AnnotationAssertion( "MESH:D012867") AnnotationAssertion( "MIAA:0000284") AnnotationAssertion( "OpenCyc:Mx4rvVjX3ZwpEbGdrcN5Y29ycA") AnnotationAssertion( "VHOG:0000860") AnnotationAssertion( "portion of skin") AnnotationAssertion( "region of skin") AnnotationAssertion(Annotation( "MA:0000151") "skin") AnnotationAssertion( "skin region") AnnotationAssertion( "skin zone") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0000014") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "zone of skin") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/6/6d/Skin.svg"^^xsd:anyURI) AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/e/e8/HumanSkinDiagram.jpg"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (non-material anatomical boundary) AnnotationAssertion(Annotation( "CARO:0000010") "A non-material anatomical entity of two dimensions. Anatomical boundaries are contiguous structures.") AnnotationAssertion( "AEO:0000192") AnnotationAssertion( "CARO:0000010") AnnotationAssertion( "FMA:50705") AnnotationAssertion(Annotation( "CARO:0000010") "anatomical boundary") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0000015") AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "Except in the case of abstracted fiat boundaries such as the midline plane of an organism, all 2D anatomical entities have a 3 dimensional projection. For example, the surface of the shell of a muscle has a distinct shape that projects into the third dimension. Note that boundaries are 2D structures. They have no thickness - and so can not be sites of gene expression or gene product localisation. For this, use boundary region terms.") AnnotationAssertion(rdfs:label "non-material anatomical boundary") SubClassOf(Annotation( "CARO"^^xsd:string) ) # Class: (endocrine pancreas) AnnotationAssertion(Annotation( ) Annotation( "GO:GO") "The part of the pancreas that is part of the endocrine system and is made up of islet cells, which produce insulin, glucagon and somatostatin.") AnnotationAssertion( "create a separate class for distributed pancreas, eg cyclostomes?") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000049") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( ) "The part of the pancreas that acts as an endocrine gland, consisting of the islets of Langerhans, which secrete insulin and other hormones. [TFD][VHOG]") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0001260") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "The zebrafish endocrine pancreas is composed of small groups of islet cells that are distributed throughout the exocrine pancreas. The islet cells produce insulin, glucagon and somatostatin.[TAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000049") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "DOI:10.1016/j.crvi.2007.03.006 Madsen OD, Pancreas phylogeny and ontogeny in relation to a 'pancreatic stem cell'. C.R. Biologies (2007)") "In the hagfish and lampreys (our most primitive vertebrate species of today), the first sign of 'a new organ' is found as collections of endocrine cells around the area of the bile duct connection with the duodenum. These endocrine organs are composed of 99% beta cells and 1% somatostatin-producing delta cells. Compared to the more primitive protochordates (e.g. amphioxus), this represents a stage where all previously scattered insulin-producing cells of the intestinal tissue have now quantitatively migrated to found a new organ involved in sensing blood glucose rather than gut glucose. Only later in evolution, the beta cells are joined by exocrine tissue and alpha cells (exemplified by the rat-, rabbit- and elephant-fishes). Finally, from sharks and onwards in evolution, we have the islet PP-cell entering to complete the pancreas.[well established][VHOG]") AnnotationAssertion(Annotation( ) "endocrine and exocrine pancreas are not co-associated in hagfishes or lampreys") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0000650") AnnotationAssertion( "CALOHA:TS-1302") AnnotationAssertion( "EFO:0002542") AnnotationAssertion( "EMAPA:35305") AnnotationAssertion( "EV:0100129") AnnotationAssertion( "FMA:16018") AnnotationAssertion( "MA:0001582") AnnotationAssertion( "NCIT:C32509") AnnotationAssertion( "TAO:0001260") AnnotationAssertion( "VHOG:0000049") AnnotationAssertion( "ZFA:0001260") AnnotationAssertion( "endocrine pancreas") AnnotationAssertion( "pars endocrina pancreatis") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0000650") "endocrine part of pancreas") AnnotationAssertion( "islets of Langerhans part of pancreas") AnnotationAssertion( "UBERON:0000016") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "endocrine pancreas") SubClassOf(Annotation( "ZFA"^^xsd:string) ) SubClassOf( ) SubClassOf(Annotation( "AAO"^^xsd:string) Annotation( "FMA"^^xsd:string) Annotation( "XAO"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (exocrine pancreas) AnnotationAssertion(Annotation( ) Annotation( "GOC:GO") "The part of the pancreas that is part of the exocrine system and which produces and store zymogens of digestive enzymes, such as chymotrypsinogen and trypsinogen in the acinar cells [GO].") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0001249") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "The exocrine pancreas is composed of acinar epithelial cells and ductal epithelium that manufacture the proteolytic enzymes and bicarbonate required for digestion.[TAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000048") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( ) "The part of the pancreas that acts as an exocrine gland, consisting of the pancreatic acini, which produce pancreatic juice and secrete it into the intestine to aid in protein digestion. [TFD][VHOG]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000048") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "DOI:10.1016/j.crvi.2007.03.006 Madsen OD, Pancreas phylogeny and ontogeny in relation to a 'pancreatic stem cell'. C.R. Biologies (2007)") "In the hagfish and lampreys (our most primitive vertebrate species of today), the first sign of 'a new organ' is found as collections of endocrine cells around the area of the bile duct connection with the duodenum. These endocrine organs are composed of 99% beta cells and 1% somatostatin-producing delta cells. Compared to the more primitive protochordates (e.g. amphioxus), this represents a stage where all previously scattered insulin-producing cells of the intestinal tissue have now quantitatively migrated to found a new organ involved in sensing blood glucose rather than gut glucose. Only later in evolution, the beta cells are joined by exocrine tissue and alpha cells (exemplified by the rat-, rabbit- and elephant-fishes). Finally, from sharks and onwards in evolution, we have the islet PP-cell entering to complete the pancreas.[well established][VHOG]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010407") AnnotationAssertion( "BTO:0000434") AnnotationAssertion( "CALOHA:TS-1241") AnnotationAssertion( "EMAPA:35328") AnnotationAssertion( "EV:0100093") AnnotationAssertion( "FMA:16017") AnnotationAssertion( "MA:0002415") AnnotationAssertion( "NCIT:C32546") AnnotationAssertion( "TAO:0001249") AnnotationAssertion(Annotation( "ncithesaurus:Exocrine_Pancreas") "UMLS:C0553695") AnnotationAssertion( "VHOG:0000048") AnnotationAssertion( "XAO:0000137") AnnotationAssertion( "ZFA:0001249") AnnotationAssertion( "exocrine pancreas") AnnotationAssertion( "pars exocrina pancreatis") AnnotationAssertion( "uberon") AnnotationAssertion( "exocrine component of pancreas") AnnotationAssertion(Annotation( "BTO:0000434") "exocrine part of pancreas") AnnotationAssertion( "UBERON:0000017") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "exocrine pancreas") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (camera-type eye) AnnotationAssertion(Annotation( ) Annotation( "GO:0043010") "An organ of sight that includes the camera-type eyeball and supporting structures such as the lacrimal apparatus, the conjunctiva, the eyelid.") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0000107") Annotation( "TAO"^^xsd:string) Annotation( "TAO:wd"^^xsd:string) "A cavitated compound organ that transduces light waves into neural signals.[TAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000275") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "DOI:10.1038/nrn2283 Lamb TD, Collin SP and Pugh EN Jr, Evolution of the vertebrate eye: opsins, photoreceptors, retina and eye cup. Nature Reviews Neuroscience (2007)") "The eye of the adult lamprey is remarkably similar to our own, and it possesses numerous features (including the expression of opsin genes) that are very similar to those of the eyes of jawed vertebrates. The lamprey's camera-like eye has a lens, an iris and extra-ocular muscles (five of them, unlike the eyes of jawed vertebrates, which have six), although it lacks intra-ocular muscles. Its retina also has a structure very similar to that of the retinas of other vertebrates, with three nuclear layers comprised of the cell bodies of photoreceptors and bipolar, horizontal, amacrine and ganglion cells. The southern hemisphere lamprey, Geotria australis, possesses five morphological classes of retinal photoreceptor and five classes of opsin, each of which is closely related to the opsins of jawed vertebrates. Given these similarities, we reach the inescapable conclusion that the last common ancestor of jawless and jawed vertebrates already possessed an eye that was comparable to that of extant lampreys and gnathostomes. Accordingly, a vertebrate camera-like eye must have been present by the time that lampreys and gnathostomes diverged, around 500 Mya.[well established][VHOG]") AnnotationAssertion(Annotation( "FMA"^^xsd:string) "FMA distinguishes Eye (subdivision of face) which has its parts an Eyeball (organ), as well as other structures, and the orbit of skull. MA includes eyelid, conjunctiva and lacrimal apparatus as part of MA:eye - consistent with FMA - so we can infer that MA:eye is more like FMA:eye than FMA:eyeball. For other AOs this distinction is less meaningful - e.g. ZFA has no eyelid; XAO has no eyelid, but it has conjuctiva, which is considered part of the xao:eye. GO considers eyelid development part of eye development. See also notes on optic nerve - XAO, AAO and BTO consider this part of the eye. MA considers the eye muscles part of the eye, whereas FMA has a class 'orbital content' for this") AnnotationAssertion(Annotation( "FMA:54448") "eye") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010340") AnnotationAssertion( "BIRNLEX:1169") AnnotationAssertion( "BTO:0004688") AnnotationAssertion( "EHDAA2:0000484") AnnotationAssertion( "EHDAA:936") AnnotationAssertion( "EMAPA:16198") AnnotationAssertion( "FMA:54448") AnnotationAssertion( "MA:0000261") AnnotationAssertion( "NCIT:C12401") AnnotationAssertion( "OpenCyc:Mx8Ngx4rwKSh9pwpEbGdrcN5Y29ycB4rvVil5pwpEbGdrcN5Y29ycB4rvViTvpwpEbGdrcN5Y29ycA") AnnotationAssertion( "TAO:0000107") AnnotationAssertion(Annotation( "BIRNLEX:1169") "UMLS:C0015392") AnnotationAssertion(Annotation( "ncithesaurus:Eye") "UMLS:C0015392") AnnotationAssertion(Annotation( "BIRNLEX:1169") "UMLS:C1280202") AnnotationAssertion( "VHOG:0000275") AnnotationAssertion( "XAO:0000179") AnnotationAssertion( "ZFA:0000107") AnnotationAssertion(Annotation( "FMA:54448") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "regio orbitalis") AnnotationAssertion( "vertebrate eye") AnnotationAssertion( "uberon") AnnotationAssertion( "camera-type eye plus associated structures") AnnotationAssertion(Annotation( "TAO:0000107") Annotation( ) "eyes") AnnotationAssertion(Annotation( "FMA:54448") "orbital part of face") AnnotationAssertion(Annotation( "FMA:54448") "orbital region") AnnotationAssertion( "UBERON:0000019") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "camera-type eye") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "definitional"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (sense organ) AnnotationAssertion(Annotation( ) Annotation( ) "An organ that is capable of transducing sensory stimulus to the nervous system.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AEO:0000094") AnnotationAssertion( "BSA:0000121") AnnotationAssertion( "BTO:0000202") AnnotationAssertion( "CALOHA:TS-2043") AnnotationAssertion( "EHDAA2:0001824") AnnotationAssertion( "EHDAA:500") AnnotationAssertion( "EMAPA:35955") AnnotationAssertion( "FBbt:00005155") AnnotationAssertion( "GAID:63") AnnotationAssertion( "HAO:0000930") AnnotationAssertion( "MA:0000017") AnnotationAssertion( "MESH:D012679") AnnotationAssertion( "NCIT:C33224") AnnotationAssertion(Annotation( "ncithesaurus:Organ_of_the_Special_Sense") "UMLS:C0935626") AnnotationAssertion( "VHOG:0001407") AnnotationAssertion( "WBbt:0006929") AnnotationAssertion(Annotation( "OBOL:accepted"^^xsd:string) "organ of sense organ system") AnnotationAssertion(Annotation( "OBOL:accepted"^^xsd:string) "organ of sensory organ system") AnnotationAssertion(Annotation( "OBOL:accepted"^^xsd:string) "organ of sensory system") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "sense organ system organ") AnnotationAssertion( "sensory organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "sensory organ system organ") AnnotationAssertion(Annotation( "OBOL:accepted"^^xsd:string) "sensory system organ") AnnotationAssertion(Annotation( "WBbt:0006929") "sensillum") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0000202") "Sinnesorgan") AnnotationAssertion( "sensor") AnnotationAssertion( "UBERON:0000020") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "sense organ") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/c/c0/Gray722.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (cutaneous appendage) AnnotationAssertion(Annotation( ) "Anatomical projection that protrudes from the skin. Examples: hair, nail, feather, claw, hoof, horn, wattle, spur, beak, antler, bristle and some scales.") AnnotationAssertion( "Mammary glands develop by similar mechanisms, and there is an argument for including them here (e.g. http://www.ncbi.nlm.nih.gov/pubmed/20484386), but these structures do not fit the current definition (lactiferous glands are part of the integumentary system in FMA). Note the FMA class is a subdivision of epidermis, which may be too restrictive for our purposes here.") AnnotationAssertion( ) AnnotationAssertion( "CALOHA:TS-0051") AnnotationAssertion( "FMA:71012") AnnotationAssertion(Annotation( "FMA:71012") "skin appendage") AnnotationAssertion( "epidermal appendage") AnnotationAssertion( "uberon") AnnotationAssertion( "epidermal growth") AnnotationAssertion( "UBERON:0000021") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "cutaneous appendage") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (tube) AnnotationAssertion(Annotation( ) "Any hollow cylindrical anatomical structure containing a lumen through which substances are transported.") AnnotationAssertion( "not every anatomical conduit is a tube - for example, a bone foramen is an opening in the bone, and there is no distinct separate tube structure. Tubes may transport large mixed objects (for example, a bolus of food in the digestive tube) or they may transport the secretions of a single gland (for example, gland ducts)") AnnotationAssertion( "tubular") AnnotationAssertion( "galen:Tube") AnnotationAssertion( "anatomical tube") AnnotationAssertion( "duct") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0000025") AnnotationAssertion(rdfs:label "tube") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (appendage) AnnotationAssertion(Annotation( "CARO:DOS") "Major subdivision of an organism that protrudes from the body[DOS, CARO].") AnnotationAssertion(Annotation( "BILA:0000018") "An appendage is an external body part, or natural prolongation, that protrudes from an organism's body, such as a vertebrate's limbs[BILA][BILA:0000018].") AnnotationAssertion(Annotation( "GO:0048736") "Organ or organ part that is attached to the body of an organism. For example a limb[GO, modified][GO:0048736].") AnnotationAssertion( "appendicular") AnnotationAssertion( "this is currently a subtype of organism subdivision - which would exclude feathers") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AEO:0000193") AnnotationAssertion( "BILA:0000018") AnnotationAssertion( "BTO:0001492") AnnotationAssertion( "CARO:0010003") AnnotationAssertion( "EFO:0000799") AnnotationAssertion( "EHDAA2:0003193") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37283") AnnotationAssertion( "EV:0100155") AnnotationAssertion( "FBbt:00007000") AnnotationAssertion( "HAO:0000144") AnnotationAssertion( "MAT:0000023") AnnotationAssertion( "MESH:D005121") AnnotationAssertion( "MIAA:0000023") AnnotationAssertion( "NCIT:C61460") AnnotationAssertion( "OpenCyc:Mx4rvViC-JwpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Appendage") "UMLS:C0598782") AnnotationAssertion( "VSAO:0000075") AnnotationAssertion( "XAO:0000218") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "XAO:0000218") Annotation( ) "appendages") AnnotationAssertion(Annotation( "BTO:0001492") "extremitaet") AnnotationAssertion( "extremity") AnnotationAssertion(Annotation( "MP:0000001") "limbs/digits/tail") AnnotationAssertion( "UBERON:0000026") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "appendage") SubClassOf( ) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (lymph node) AnnotationAssertion(Annotation( "BTO:0000784") "Any of the rounded masses of lymphoid tissue that are surrounded by a capsule of connective tissue, are distributed along the lymphatic vessels, and contain numerous lymphocytes which filter the flow of lymph.") AnnotationAssertion(Annotation( ) Annotation( "ZFA:0005318") ) AnnotationAssertion(Annotation( "Wikipedia"^^xsd:string) ) AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001273") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0030223693 Liem KF, Bemis WE, Walker WF, Grande L, Functional Anatomy of the Vertebrates: An Evolutionary Perspective (2001) p.630") "Lymph nodes that are associated with the lymphatic system have evolved in mammals.[well established][VHOG]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0000784") AnnotationAssertion( "CALOHA:TS-0579") AnnotationAssertion( "EFO:0000872") AnnotationAssertion( "EMAPA:35523") AnnotationAssertion( "EV:0100050") AnnotationAssertion( "FMA:5034") AnnotationAssertion( "GAID:947") AnnotationAssertion( "MA:0000139") AnnotationAssertion( "MAT:0000442") AnnotationAssertion( "MESH:D008198") AnnotationAssertion( "NCIT:C12745") AnnotationAssertion( "NCIT:C33027") AnnotationAssertion( "OpenCyc:Mx4rwLPqLpwpEbGdrcN5Y29ycA") AnnotationAssertion( "TAO_RETIRED:0005318") AnnotationAssertion(Annotation( "ncithesaurus:Lymph_Node") "UMLS:C0024204") AnnotationAssertion( "VHOG:0001273") AnnotationAssertion( "ZFA_RETIRED:0005318") AnnotationAssertion( "galen:Lymphnode") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "VHOG:0001273") "lymph gland") AnnotationAssertion(Annotation( ) Annotation( ) "nodus lymphaticus") AnnotationAssertion( "UBERON:0000029") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "lymph node") AnnotationAssertion(rdfs:seeAlso "https://github.com/obophenotype/uberon/issues/650"^^xsd:anyURI) AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/b/b8/Illu_lymph_node_structure.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lamina propria) AnnotationAssertion(Annotation( ) "A thin layer of loose connective tissue which lies beneath the epithelium and together with the epithelium constitutes the mucosa[WP]. The lamina propria contains capillaries and a central lacteal (lymph vessel) in the small intestine, as well as lymphoid tissue. Lamina propria also contains glands with the ducts opening on to the mucosal epithelium, that secrete mucus and serous secretions.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0002330") AnnotationAssertion( "FMA:62517") AnnotationAssertion( "NCIT:C32918") AnnotationAssertion(Annotation( "ncithesaurus:Lamina_Propria") "UMLS:C1179187") AnnotationAssertion( "lamina propria mucosa") AnnotationAssertion( "lamina propria mucosae") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0002330") "tunica propria") AnnotationAssertion( "UBERON:0000030") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "lamina propria") AnnotationAssertion( "GI:Organization.svg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lamina propria of trachea) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A lamina propria that is part of a respiratory airway.") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:35877") AnnotationAssertion( "FMA:265157") AnnotationAssertion( "MA:0001858") AnnotationAssertion( "NCIT:C49305") AnnotationAssertion(Annotation( "ncithesaurus:Trachea_Lamina_Propria") "UMLS:C1710457") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "lamina propria mucosa of trachea") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "lamina propria mucosa of windpipe") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "lamina propria mucosae of trachea") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "lamina propria mucosae of windpipe") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "lamina propria of windpipe") AnnotationAssertion( "trachea lamina propria") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "trachea lamina propria mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "trachea lamina propria mucosae") AnnotationAssertion( "tracheal lamina propria") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "windpipe lamina propria") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "windpipe lamina propria mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "windpipe lamina propria mucosae") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0000031") AnnotationAssertion(rdfs:label "lamina propria of trachea") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete cranial structure) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0000032") AnnotationAssertion(rdfs:comment "obsoleted as it was a grouping class that served no purpose") AnnotationAssertion(rdfs:label "obsolete cranial structure") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (head) AnnotationAssertion(Annotation( ) Annotation( "GO:0060322") "The head is the anterior-most division of the body [GO].") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0010335") Annotation( "AAO"^^xsd:string) Annotation( "AAO:BJB"^^xsd:string) "Organism subdivision that is the part of the body consisting of the cranial and pharyngeal regions.[AAO]") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0001114") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "Organism subdivision which is the part of the body which consists of the cranial and pharygeal regions.[TAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001644") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0072528305 Kardong KV, Vertebrates: Comparative Anatomy, Function, Evolution (2006) p.82") "Vertebrate evolution has been characterized by a fresh and vast array of cranial structures that collectively form the head.[well established][VHOG]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010335") AnnotationAssertion( "AEO:0000106") AnnotationAssertion( "BILA:0000115") AnnotationAssertion( "BIRNLEX:1230") AnnotationAssertion( "BTO:0000282") AnnotationAssertion( "CALOHA:TS-0436") AnnotationAssertion( "EFO:0000964") AnnotationAssertion( "EHDAA2:0003106") AnnotationAssertion( "EMAPA:31858") AnnotationAssertion( "FBbt:00000004") AnnotationAssertion( "FMA:7154") AnnotationAssertion( "GAID:61") AnnotationAssertion( "HAO:0000397") AnnotationAssertion( "MA:0000023") AnnotationAssertion( "MAT:0000294") AnnotationAssertion( "MESH:D006257") AnnotationAssertion( "MIAA:0000294") AnnotationAssertion( "NCIT:C12419") AnnotationAssertion( "OpenCyc:Mx4rEOLm4rgPEdmAAAACs6hRjg") AnnotationAssertion( "OpenCyc:Mx4rvVi6YJwpEbGdrcN5Y29ycA") AnnotationAssertion( "SPD:0000016") AnnotationAssertion( "TAO:0001114") AnnotationAssertion( "TGMA:0000002") AnnotationAssertion(Annotation( "BIRNLEX:1230") "UMLS:C0018670") AnnotationAssertion(Annotation( "ncithesaurus:Head") "UMLS:C0018670") AnnotationAssertion( "VHOG:0001644") AnnotationAssertion( "WBbt:0005739") AnnotationAssertion( "XAO:0003024") AnnotationAssertion( "ZFA:0001114") AnnotationAssertion( "galen:Head") AnnotationAssertion(Annotation( "FMA:7154") "head (volume)") AnnotationAssertion( "adult head") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "SPD:0000016") "cephalic area") AnnotationAssertion( "UBERON:0000033") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "head") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (primary ovarian follicle) AnnotationAssertion(Annotation( ) Annotation( "GO:0001545") Annotation( "GOC:mtg_mpo") "An ovarian follicle that has one layer of granulosa cells.") AnnotationAssertion( ) AnnotationAssertion( "BTO:0000410") AnnotationAssertion( "EMAPA:35631") AnnotationAssertion( "FMA:18634") AnnotationAssertion( "MA:0002907") AnnotationAssertion(Annotation( "FMA:18634") Annotation( ) "folliculus ovaricus primarius") AnnotationAssertion(Annotation( "EMAPA:35631") "ovary primary follicle") AnnotationAssertion(Annotation( "MA:0002907") "ovary primary follicle") AnnotationAssertion(Annotation( "FMA:18634") "primary follicle of ovary") AnnotationAssertion(Annotation( "FMA:18634") "primary ovarian follicle") AnnotationAssertion( "uberon") AnnotationAssertion( "preantral follicle of ovary") AnnotationAssertion( "primary egg follicle") AnnotationAssertion(Annotation( "EMAPA:35631") "primary follicle") AnnotationAssertion( "UBERON:0000035") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "primary ovarian follicle") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (secondary ovarian follicle) AnnotationAssertion(Annotation( ) Annotation( ) Annotation( "GO:0001546") "A maturing ovarian follicle that has two more more layers of granulosa cells, up to the onset of antrum formation.") AnnotationAssertion( "consider adopting distinction in MA") AnnotationAssertion( "EMAPA:35632") AnnotationAssertion( "FMA:18637") AnnotationAssertion( "MA:0002908") AnnotationAssertion( "folliculus ovaricus secondarius") AnnotationAssertion(Annotation( "MA:0002908") "ovary secondary follicle") AnnotationAssertion(Annotation( "GO:0001546") "pre-antral follicle") AnnotationAssertion(Annotation( "GO:0001546") "preantral follicle") AnnotationAssertion( "secondary follicle of ovary") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:18637") "antral follicle of ovary") AnnotationAssertion(Annotation( "EMAPA:30777") "pre-ovulatory follicle") AnnotationAssertion( "secondary egg follicle") AnnotationAssertion(Annotation( "EMAPA:35632") "secondary follicle") AnnotationAssertion( "UBERON:0000036") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "secondary ovarian follicle") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (tertiary ovarian follicle) AnnotationAssertion(Annotation( ) Annotation( ) "A follicle that has reached the most mature stage of folliculogenesis, characterized by the presence of the antrum.") AnnotationAssertion( "antral follicle") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:30763") AnnotationAssertion( "FMA:18641") AnnotationAssertion( "MA:0002909") AnnotationAssertion( "NCIT:C32692") AnnotationAssertion(Annotation( "ncithesaurus:Graafian_Follicle") "UMLS:C0600225") AnnotationAssertion(Annotation( ) "Graafian follicle") AnnotationAssertion(Annotation( "GO:0001547") "antral ovarian follicle") AnnotationAssertion(Annotation( "FMA:18641") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "folliculi ovarici vesiculosi") AnnotationAssertion( "folliculus ovaricus tertiarius") AnnotationAssertion(Annotation( "FMA:18641") "folliculus ovaricus tertiarius (vesiculosus)") AnnotationAssertion( "folliculus ovaricus tertiarius (vesiculous)") AnnotationAssertion(Annotation( ) Annotation( "MA:0002909") "ovary antral follicle") AnnotationAssertion(Annotation( ) Annotation( "FMA:18641") "tertiary follicle of ovary") AnnotationAssertion(Annotation( "FMA:18641") "vesicular follicle of ovary") AnnotationAssertion(Annotation( "FMA:18641") "vesicular ovarian follicle") AnnotationAssertion( "uberon") AnnotationAssertion( "tertiary egg follicle") AnnotationAssertion( "UBERON:0000037") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "tertiary ovarian follicle") AnnotationAssertion( "Primary:follicle-4.JPG"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (follicular fluid) AnnotationAssertion(Annotation( ) Annotation( "ISBN:145114847X") Annotation( "MESH:D015571") "The fluid surrounding the ovum and granulosa cells in the ovarian follicle.") AnnotationAssertion( "Generally, larger species such as ovine, equine, porcine, human, and bovine have larger follicles, with the fluid comprising a substantial proportion of the volume of the follicles at ovulation (estimated at >95% in bovine [3]). Smaller species such as rats and mice have smaller follicles with fractionally less follicular fluid[20164441]") AnnotationAssertion( "The follicular fluid contains sex steroids, glycoprotein hormones, plasma proteins, mucopolysaccharides, and enzymes and is rich in hyaluronic acid.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0004383") AnnotationAssertion( "CALOHA:TS-0728") AnnotationAssertion( "FMA:18665") AnnotationAssertion( "GAID:372") AnnotationAssertion( "MA:0002511") AnnotationAssertion( "MESH:D015571") AnnotationAssertion( "NCIT:C52556") AnnotationAssertion(Annotation( "ncithesaurus:Ovarian_Follicle_Fluid") "UMLS:C1709369") AnnotationAssertion(Annotation( "FMA:18665") "liquor follicularis") AnnotationAssertion(Annotation( ) "liquor folliculi") AnnotationAssertion(Annotation( "MA:0002511") "ovary follicle fluid") AnnotationAssertion( "uberon") AnnotationAssertion( "antral fluid, ovarian follicle") AnnotationAssertion(Annotation( ) Annotation( ) "liquor folliculi") AnnotationAssertion(Annotation( "BTO:0004383") "ovarian follicular fluid") AnnotationAssertion(Annotation( "BTO:0004383") "ovary follicular fluid") AnnotationAssertion( "UBERON:0000038") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "follicular fluid") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/8/81/Gray3.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (follicular antrum) AnnotationAssertion(Annotation( ) "Region of ovarian follicle filled with follicular fluid.") AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37867") AnnotationAssertion( "FMA:18675") AnnotationAssertion(Annotation( "FMA:18675") "antral cavity") AnnotationAssertion(Annotation( "FMA:18675") "antrum folliculare") AnnotationAssertion(Annotation( "GO:0001548") "ovarian follicle antrum") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "antrum follicularum") AnnotationAssertion( "UBERON:0000039") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "follicular antrum") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (serous membrane) AnnotationAssertion(Annotation( ) Annotation( ) "Multi-tissue structure that is comprised of a secretory epithelial layer (mesothelium) and a connective tissue layer.") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0005425") Annotation( "TAO"^^xsd:string) Annotation( ) "A multi-tissue structure that is comprised of a secretory epithelial layer and a connective tissue layer.[TAO]") AnnotationAssertion(Annotation( ) "a smooth membrane consisting of a thin layer of cells which excrete serous fluid. Serous membranes line and enclose several body cavities, known as serous cavities, where they secrete a lubricating fluid which reduces friction from muscle movement. Serosa is not to be confused with adventitia, a connective tissue layer which binds together structures rather than reducing friction between them. Each serous membrane is composed of a secretory epithelial layer and a connective tissue layer underneath. The epithelial layer, known as mesothelium, consists of a single layer of avascular flat nucleated cells (cuboidal epithelium) which produce the lubricating serous fluid. This fluid has a consistency similar to thin mucus. These cells are bound tightly to the underlying connective tissue. The connective tissue layer provides the blood vessels and nerves for the overlying secretory cells, and also serves as the binding layer which allows the whole serous membrane to adhere to organs and other structures.[WP]") AnnotationAssertion(Annotation( "FMA"^^xsd:string) "in FMA, SM = mesothelium + connective tissue. It excludes the cavity. Serous sac = SM + cavity. Note that the SM is a subtype of wall in FMA.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:9581") AnnotationAssertion( "GAID:19") AnnotationAssertion( "MESH:D012704") AnnotationAssertion( "NCIT:C13169") AnnotationAssertion( "TAO:0005425") AnnotationAssertion(Annotation( "ncithesaurus:Serosa") "UMLS:C0036760") AnnotationAssertion( "ZFA:0005425") AnnotationAssertion(Annotation( "FMA:9581") Annotation( ) "tunica serosa") AnnotationAssertion(Annotation( "FMA:9581") "wall of serous sac") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "serosa") AnnotationAssertion( "UBERON:0000042") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "serous membrane") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/4/4e/Ens.png"^^xsd:anyURI) AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/en/thumb/4/4e/Ens.png/200px-Ens.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (tendon) AnnotationAssertion(Annotation( ) Annotation( ) Annotation( "GO_REF:0000034"^^xsd:string) Annotation( "VSAO:0000073") "Dense regular connective tissue that connects muscle to bone[VSAO].") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "VSAO:0000073") Annotation( "VSAO"^^xsd:string) Annotation( "PSPUB:0000170"^^xsd:string) "Dense regular connective tissue that connects muscle to bone.[VSAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001286") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "DOI:10.1016/S1095-6433(02)00241-6 Summers AP, Koob TJ, The evolution of tendon - morphology and material properties. Comparative Biochemistry and Physiology-Part A: Molecular and Integrative Physiology (2002)") "Phylogenetically, tendinous tissue first appears in the invertebrate chordate Branchiostoma as myosepta. This two-dimensional array of collagen fibers is highly organized, with fibers running along two primary axes. In hagfish the first linear tendons appear and the myosepta have developed specialized regions with unidirectional fiber orientation - a linear tendon within the flat sheet of myoseptum.[well established][VHOG]") AnnotationAssertion(Annotation( "FMA"^^xsd:string) "in FMA, tendon is an organ component that with parts dense-irregular-connective-tissue of tendon and dense-irregular-connective-tissue of tendon sheath; we follow VSAO in making it a subtype of the former. In VSAO tendons connect muscle to bone; in WP the def states integument (e.g. auricular muscles) - but JB confirms this is not actually tendon but aponeurosis") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AEO:0000091") AnnotationAssertion( "BTO:0001356") AnnotationAssertion( "CALOHA:TS-1021") AnnotationAssertion( "EHDAA2:0003091") AnnotationAssertion( "EMAPA:35854") AnnotationAssertion( "EV:0100149") AnnotationAssertion( "FMA:9721") AnnotationAssertion( "GAID:276") AnnotationAssertion( "MA:0000115") AnnotationAssertion( "MESH:D013710") AnnotationAssertion( "NCIT:C13045") AnnotationAssertion( "OpenCyc:Mx4rvVjefJwpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Tendon") "UMLS:C0039508") AnnotationAssertion( "VHOG:0001286") AnnotationAssertion( "VSAO:0000073") AnnotationAssertion( "XAO:0000173") AnnotationAssertion( "ZFA:0005647") AnnotationAssertion( "galen:Tendon") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "sinew") AnnotationAssertion(Annotation( ) Annotation( ) "tendo") AnnotationAssertion( "UBERON:0000043") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "tendon") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/3/3c/Achilles-tendon.jpg"^^xsd:anyURI) SubClassOf(Annotation( "VSAO"^^xsd:string) ) SubClassOf(Annotation( "OG") ObjectSomeValuesFrom( )) SubClassOf(Annotation( "AEO"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (dorsal root ganglion) AnnotationAssertion(Annotation( "BIRNLEX:2596") "Sensory ganglia located on the dorsal spinal roots within the vertebral column. The spinal ganglion cells are pseudounipolar. The single primary branch bifurcates sending a peripheral process to carry sensory information from the periphery and a central branch which relays that information to the spinal cord or brain. (MSH) * ganglion found on the posterior root of each spinal nerve, composed of the unipolar nerve cell bodies of the sensory neurons of the nerve. (CSP).") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0000200") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "Trunk ganglion which is located adjacent to the spine on a dorsal root and contains the cell bodies of afferent sensory nerves.[TAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000222") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "DOI:10.1002/1097-0185(20000615)261:3<111::AID-AR6>3.0.CO;2-F Butler AB, Chordate evolution and the origin of craniates: An old brain in a new head. AnaT Rec (New Anat) (2000)") "From comparative analyses of craniate brains, a morphotype of the brain in the earliest craniate stock can be constructed. In marked contrast to cephalochordates, the ancestral craniate morphotype had a plethora of unique features, which included a telencephalon with pallial and subpallial parts, paired olfactory bulbs with substantial projections to most or all of the telencephalic pallium, paired lateral eyes and ears, a lateral line system for both electroreception and mechanoreception, spinal cord dorsal root ganglia, and an autonomic nervous system.[well established][VHOG]") AnnotationAssertion( "The sensory ganglia of spinal nerves arise only from the neural crest, whereas many sensory ganglia of the 'dorsal' cranial nerves arise from epibranchial placodes as well as the neural crest[DOI:10.1093/icb/icn065]") AnnotationAssertion(Annotation( "FMA"^^xsd:string) "MA and EMAPA introduce distinct classes for what appears to be the same thing") AnnotationAssertion( "UBERON:0026602") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0011032") AnnotationAssertion( "BIRNLEX:2596") AnnotationAssertion( "BIRNLEX:2598") AnnotationAssertion( "BTO:0001264") AnnotationAssertion( "CALOHA:TS-0954") AnnotationAssertion( "EFO:0000900") AnnotationAssertion( "EHDAA2:0000418") AnnotationAssertion( "EHDAA2:0001897") AnnotationAssertion( "EHDAA:2899") AnnotationAssertion( "EMAPA:16667") AnnotationAssertion( "EMAPA:16668") AnnotationAssertion( "EMAPA:18372") AnnotationAssertion( "EV:0100373") AnnotationAssertion( "FMA:5888") AnnotationAssertion( "MA:0000231") AnnotationAssertion( "MA:0000232") AnnotationAssertion( "MAT:0000162") AnnotationAssertion( "MIAA:0000162") AnnotationAssertion( "NCIT:C12462") AnnotationAssertion( "TAO:0000200") AnnotationAssertion(Annotation( "BIRNLEX:2596") "UMLS:C0017070") AnnotationAssertion(Annotation( "ncithesaurus:Dorsal_Root_Ganglion") "UMLS:C0017070") AnnotationAssertion( "VHOG:0000222") AnnotationAssertion( "XAO:0000210") AnnotationAssertion( "ZFA:0000200") AnnotationAssertion(Annotation( "BTO:0001264") "dorsal root ganglion") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "ganglion of dorsal root") AnnotationAssertion(Annotation( "FMA:5888") "ganglion spinalis") AnnotationAssertion(Annotation( "FMA:5888") "spinal ganglion") AnnotationAssertion(Annotation( "BIRNLEX:2598") "spinal ganglion part of peripheral nervous system") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "DRG") AnnotationAssertion(Annotation( ) "dorsal root ganglia") AnnotationAssertion(Annotation( ) Annotation( ) "ganglion sensorium nervi spinalis") AnnotationAssertion(Annotation( "BTO:0001264") "ganglion sensorium nervi spinalis") AnnotationAssertion(Annotation( "BTO:0001264") "ganglion spinale") AnnotationAssertion(Annotation( "EMAPA:16668") "posterior root ganglion") AnnotationAssertion( "UBERON:0000044") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "dorsal root ganglion") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/7/71/DRG_Chicken_e7.jpg"^^xsd:anyURI) SubClassOf(Annotation( "MA"^^xsd:string) ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (ganglion) AnnotationAssertion(Annotation( ) Annotation( ) "A biological tissue mass, most commonly a mass of nerve cell bodies.") AnnotationAssertion( "TODO - check vert vs invert. Other species: Any of a number of aggregations of neurons, glial cells and their processes, surrounded by a glial cell and connective tissue sheath (plural: ganglia). // Subdivision of neural tree (organ) which primarily consists of cell bodies of neurons located outside the neuraxis (brain and spinal cord); together with a nucleus and its associated nerve, it constitutes a neural tree (organ). Examples: spinal ganglion, trigeminal ganglion, superior cervical ganglion, celiac ganglion, inferior hypogastric (pelvic) ganglion. // a cluster of nerve cells and associated glial cells (nuclear location) // Portion of tissue that contains cell bodies of neurons and is located outside the central nervous system.") AnnotationAssertion(Annotation( ) "A ganglion is a cluster of neurons. It is part of a nervous system. It may include glial cells. The neurons are arranged in a specific constellation: neuronal somata are concentrated at the surface, thus forming a cell cortex, and neurites are concentrated in the centre of the ganglion to form the neuropil. A ganglion is a distinct unit but several ganglia may be anterio-posteriorly joined by connectives or transversally by commissures") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0010426") Annotation( "AAO"^^xsd:string) Annotation( "AAO:EJS"^^xsd:string) "Portion of tissue that contains cell bodies of neurons and is located outside the central nervous system.[AAO]") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0000190") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "Structures containing a collection of nerve cell bodies. (Source: BioGlossary, www.Biology-Text.com)[TAO]") AnnotationAssertion(Annotation( "NLXANAT:100302") "Subdivision of nervous system which primarily consists of cell bodies of neurons located outside the neuraxis (brain and spinal cord. Examples: spinal ganglion, trigeminal ganglion, superior cervical ganglion, celiac ganglion, inferior hypogastric (pelvic) ganglion (adapted from Foundational Model of Anatomy)[NLXANAT:100302].") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000156") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "DOI:10.1016/j.ydbio.2005.02.021 Mazet F, Hutt JA, Milloz J, Millard J, Graham A, Shimeld SM, Molecular evidence from Ciona intestinalis for the evolutionary origin of vertebrate sensory placodes. Developmental Biology (2005)") "Cranial sensory placodes are focused areas of the head ectoderm of vertebrates that contribute to the development of the cranial sense organs and their associated ganglia. Placodes have long been considered a key character of vertebrates, and their evolution is proposed to have been essential for the evolution of an active predatory lifestyle by early vertebrates.[well established][VHOG]") AnnotationAssertion( "ganglionic") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010426") AnnotationAssertion( "AEO:0000135") AnnotationAssertion( "BAMS:G") AnnotationAssertion( "BTO:0000497") AnnotationAssertion( "CALOHA:TS-0397") AnnotationAssertion( "EFO:0000899") AnnotationAssertion( "EHDAA2:0003135") AnnotationAssertion( "EHDAA:2897") AnnotationAssertion( "EHDAA:4662") AnnotationAssertion( "EHDAA:5621") AnnotationAssertion( "EHDAA:918") AnnotationAssertion( "EMAPA:32846") AnnotationAssertion( "EV:0100372") AnnotationAssertion( "FBbt:00005137") AnnotationAssertion( "FMA:5884") AnnotationAssertion( "MA:0002406") AnnotationAssertion( "MAT:0000207") AnnotationAssertion( "MAT:0000343") AnnotationAssertion( "MESH:D005724") AnnotationAssertion( "MIAA:0000207") AnnotationAssertion( "MIAA:0000343") AnnotationAssertion( "NCIT:C12719") AnnotationAssertion( "NLXANAT:100302") AnnotationAssertion( "TAO:0000190") AnnotationAssertion( "TGMA:0001016") AnnotationAssertion(Annotation( "ncithesaurus:Ganglion") "UMLS:C0017067") AnnotationAssertion( "VHOG:0000156") AnnotationAssertion( "WBbt:0005189") AnnotationAssertion( "XAO:0000209") AnnotationAssertion( "ZFA:0000190") AnnotationAssertion( "uberon") AnnotationAssertion( "ganglia") AnnotationAssertion(Annotation( "BTO:0000497") "neural ganglion") AnnotationAssertion( "UBERON:0000045") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "ganglion") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "Bgee:AN"^^xsd:string) ObjectSomeValuesFrom( )) DisjointClasses(Annotation( "BTO") ) # Class: (simple eye) AnnotationAssertion(Annotation( ) "An eye with one concave chamber. Note that 'simple' does not imply a reduced level of complexity or acuity.") AnnotationAssertion( ) AnnotationAssertion( "TGMA:0000729") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0000047") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "simple eye") SubClassOf( ) # Class: (spherical lensed eye) AnnotationAssertion(Annotation( ) "Simple eye that consists of a lens of one refractive index.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0000049") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "spherical lensed eye") SubClassOf( ) # Class: (fornix of vagina) AnnotationAssertion(Annotation( ) "The deepest portions of the vagina, extending into the recesses created by the vaginal portion of cervix[WP,unvetted].") AnnotationAssertion( "fornix") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:19985") AnnotationAssertion( "NCIT:C33848") AnnotationAssertion(Annotation( "ncithesaurus:Vaginal_Fornix") "UMLS:C0227794") AnnotationAssertion(Annotation( "FMA:19985") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "fornix vaginae") AnnotationAssertion( "vaginal fornix") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "vaginal fornices") AnnotationAssertion( "UBERON:0000051") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "fornix of vagina") AnnotationAssertion( "Female:anatomy.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses( ) # Class: (fornix of brain) AnnotationAssertion(Annotation( "BIRNLEX:705") "A C-shaped bundle of fibres (axons) in the brain, and carries signals from the hippocampus to the mammillary bodies and septal nuclei. It is typically divided into the columns (crus), body, commissure and the pre-commissural and post-commissural fornix (MM).") AnnotationAssertion( "fornix") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:f") AnnotationAssertion( "BIRNLEX:705") AnnotationAssertion( "DHBA:10576") AnnotationAssertion( "DMBA:17767") AnnotationAssertion( "EMAPA:35352") AnnotationAssertion(Annotation( "inferred") "FMA:61965") AnnotationAssertion( "FMA:83865") AnnotationAssertion( "HBA:9249") AnnotationAssertion( "MA:0002747") AnnotationAssertion( "NCIT:C32289") AnnotationAssertion(Annotation( "BIRNLEX:705") "UMLS:C0152334") AnnotationAssertion(Annotation( "ncithesaurus:Cerebral_Fornix") "UMLS:C0458370") AnnotationAssertion(Annotation( "BIRNLEX:705") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=268") AnnotationAssertion( "brain fornix") AnnotationAssertion( "cerebral fornix") AnnotationAssertion(Annotation( "FMA:61965") "forebrain fornix") AnnotationAssertion(Annotation( "FMA:83865") "fornix of neuraxis") AnnotationAssertion(Annotation( "FMA:83865") "neuraxis fornix") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:61965") "fornix (column and body of fornix)") AnnotationAssertion(Annotation( "NeuroNames:268") Annotation( ) "fornix cerebri") AnnotationAssertion( "fornix hippocampus") AnnotationAssertion( "hippocampus fornix") AnnotationAssertion( "UBERON:0000052") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "fornix of brain") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/2/21/Gray747.png"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "NIFSTD"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (macula lutea) AnnotationAssertion(Annotation( "MESH:A09.371.729.522") "An oval area in the retina, usually located temporal to the posterior pole of the eye and slightly below the level of the optic disk. It is characterized by the presence of a yellow pigment diffusely permeating the inner layers, contains the fovea centralis in its center, and provides the best phototopic visual acuity. It is devoid of retinal blood vessels, except in its periphery, and receives nourishment from the choriocapillaris of the choroid. (From Cline et al., Dictionary of Visual Science, 4th ed).") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:2540") AnnotationAssertion( "BTO:0003015") AnnotationAssertion( "EMAPA:36516") AnnotationAssertion( "EV:0100349") AnnotationAssertion( "FMA:58637") AnnotationAssertion( "GAID:909") AnnotationAssertion( "MA:0001306") AnnotationAssertion( "MESH:D008266") AnnotationAssertion( "NCIT:C26464") AnnotationAssertion( "NCIT:C33044") AnnotationAssertion(Annotation( "BIRNLEX:2540") "UMLS:C0450295") AnnotationAssertion(Annotation( "ncithesaurus:Macula_Lutea") "UMLS:C0450295") AnnotationAssertion(Annotation( "BIRNLEX:2540") "UMLS:C1284755") AnnotationAssertion( "uberon") AnnotationAssertion( "macula") AnnotationAssertion(Annotation( "BTO:0003015") "macula flava retinae") AnnotationAssertion(Annotation( "BTO:0003015") "macula retinae") AnnotationAssertion( "maculae") AnnotationAssertion( "UBERON:0000053") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "macula lutea") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/e/ed/Human_eye_cross-sectional_view_grayscale.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses( ) # Class: (macula) AnnotationAssertion(Annotation( "MESH:A09.246.631.909.625.125") "Thickened areas of the saccule or utricle where the termination of the vestibular nerve occurs[MESH,modified].") AnnotationAssertion( "this refers to the inner ear structure, not the macula of the retina. We follow ZFA in including a grouping class for the macula of utricle and sacule") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0000386") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "Patches of thickened, pseudostratified epithelium of the inner ear, consisting of regular arrays of sensory hair cells interspersed with supporting cells. Each patch has its own charcteristic shape and polarity pattern. (See Anatomical Atlas entry for sensory patches of the ear by T. Whitfield.)[TAO]") AnnotationAssertion( "macular") AnnotationAssertion( "GAID:777") AnnotationAssertion( "MESH:D008267") AnnotationAssertion( "TAO:0000386") AnnotationAssertion( "ZFA:0000386") AnnotationAssertion( "macula") AnnotationAssertion(Annotation( ) "maculae") AnnotationAssertion(Annotation( "ZFA:0000386") "sensory macula") AnnotationAssertion(Annotation( "ZFA:0000386") "sensory patch") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "MESH:A09.246.631.909.625.125") "acoustic macula") AnnotationAssertion(Annotation( "MESH:A09.246.631.909.625.125") Annotation( ) "acoustic maculae") AnnotationAssertion( "UBERON:0000054") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "macula") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (vessel) AnnotationAssertion(Annotation( ) "A tubular structure that contains, conveys body fluid, such as blood or lymph.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0000055") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "vessel") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (ureter) AnnotationAssertion(Annotation( ) Annotation( "GO:0090189") "Muscular duct that propels urine from the kidneys to the urinary bladder, or related organs.") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0010254") Annotation( "AAO"^^xsd:string) Annotation( "AAO:BJB"^^xsd:string) "Anatomical structure consisting of long narrow duct which carries urine from the kidney to the urinary bladder.[AAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000605") Annotation( "VHOG"^^xsd:string) Annotation( ) "The duct of amniotes that carries urine from a metanephric kidney to the urinary bladder. [Bemis_WE, Functional_Anatomy_of_the_Vertebrates:_An_Evolutionary_Perspective, Glossary_G-29, Grande_L, Liem_KF, Third_Edition_(2001)_Orlando_Fla.:_Harcourt_College_Publishers, Walker_WF][VHOG]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000605") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0072528305 Kardong KV, Vertebrates: Comparative Anatomy, Function, Evolution (2006) p.543") "The first embryonic hint of a metanephros is the formation of the metanephric duct that appears as a ureteric diverticulum arising at the base of preexisting mesonephric duct. The ureteric diverticulum grows dorsally into the posterior region of the nephric ridge. Here it enlarges and stimulates the growth of metanephric tubules that come to make up the metanephric kidney. The metanephros becomes the adult kidney of amniotes, and the metanephric duct is usually called the ureter.[well established][VHOG]") AnnotationAssertion( "ureteral") AnnotationAssertion( "ureteric") AnnotationAssertion( "in humans, consists of adventitial, muscular and mucoa layers") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010254") AnnotationAssertion( "BTO:0001409") AnnotationAssertion( "CALOHA:TS-1084") AnnotationAssertion( "EFO:0000930") AnnotationAssertion( "EHDAA2:0002139") AnnotationAssertion( "EHDAA:9341") AnnotationAssertion( "EMAPA:17950") AnnotationAssertion( "EV:0100097") AnnotationAssertion( "FMA:9704") AnnotationAssertion( "GAID:438") AnnotationAssertion( "MA:0000378") AnnotationAssertion( "MAT:0000120") AnnotationAssertion( "MESH:D014513") AnnotationAssertion( "MIAA:0000120") AnnotationAssertion( "NCIT:C12416") AnnotationAssertion( "OpenCyc:Mx4rvhmm6JwpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Ureter") "UMLS:C0041951") AnnotationAssertion( "VHOG:0000605") AnnotationAssertion( "XAO:0000144") AnnotationAssertion( "galen:Ureter") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "ISBN:0073040584"^^xsd:string) Annotation( "VHOG:0000605") "metanephric duct") AnnotationAssertion( "UBERON:0000056") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "ureter") AnnotationAssertion( "Urinary:system.svg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "GO"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (urethra) AnnotationAssertion(Annotation( "MGI:anna"^^xsd:string) Annotation( "MP:0000537") "The fibromuscular tubular canal through which urine is discharged from the bladder to the exterior via the external urinary meatus; in males, the urethra is joined by the ejaculatory ducts and serves as a passageway for semen during ejaculation, as well as a canal for urine during voiding; in females, the urethra is shorter and emerges above the vaginal opening.") AnnotationAssertion( "urethral") AnnotationAssertion( "In human males, the urethra travels through the penis, and carries semen as well as urine. In females, the urethra is shorter and emerges above the vaginal opening.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0001426") AnnotationAssertion( "CALOHA:TS-1132") AnnotationAssertion( "EFO:0000931") AnnotationAssertion( "EMAPA:30901") AnnotationAssertion( "EV:0100099") AnnotationAssertion( "FMA:19667") AnnotationAssertion( "GAID:390") AnnotationAssertion( "MA:0000379") AnnotationAssertion( "MAT:0000121") AnnotationAssertion( "MESH:D014521") AnnotationAssertion( "MIAA:0000121") AnnotationAssertion( "NCIT:C12417") AnnotationAssertion( "OpenCyc:Mx4rvVjkypwpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Urethra") "UMLS:C0041967") AnnotationAssertion( "VHOG:0001264") AnnotationAssertion( "XAO:0000153") AnnotationAssertion( "galen:Urethra") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0000057") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "urethra") AnnotationAssertion( "Female:anatomy.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "pelvic part of UG sinus gives rise to prostatic and membranous parts of urethra") Annotation( "Wikipedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "Wikipedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (duct) AnnotationAssertion(Annotation( ) Annotation( ) "A tubular structure that transports secreted or excreted substances.") AnnotationAssertion(Annotation( "ZFA:0005171") "A tube shaped portion of tissue lined with epithelial cells that collects secretions and routes them to their destination[ZFA:0005171].") AnnotationAssertion( "Most ducts, but not all, are exocrine gland ducts. Some ontologies classify structures such as the oviduct here.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0011123") AnnotationAssertion( "FBbt:00100314") AnnotationAssertion( "FMA:30320") AnnotationAssertion( "NCIT:C12948") AnnotationAssertion( "TAO:0005171") AnnotationAssertion(Annotation( "ncithesaurus:Duct") "UMLS:C0687028") AnnotationAssertion( "XAO:0004000") AnnotationAssertion( "ZFA:0005171") AnnotationAssertion( "galen:Duct") AnnotationAssertion( "anatomical duct") AnnotationAssertion( "exocrine duct") AnnotationAssertion( "exocrine gland duct") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "XAO:0004000") Annotation( ) "ducts") AnnotationAssertion( "UBERON:0000058") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "duct") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (large intestine) AnnotationAssertion(Annotation( ) Annotation( "ISBN:0073040584"^^xsd:string) "A subdivision of the digestive tract that connects the small intestine to the cloaca or anus. Lacks or has few villi[Kardong].") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000054") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0030223693 Liem KF, Bemis WE, Walker WF, Grande L, Functional Anatomy of the Vertebrates: An Evolutionary Perspective (2001) p.566") "Intestinal surface area also is increased in amphibians and reptiles by internal folds and occasionally by a few villi. The intestine can be divided into a small intestine and a slightly wider large intestine.[well established][VHOG]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010396") AnnotationAssertion( "BTO:0000706") AnnotationAssertion( "CALOHA:TS-1306") AnnotationAssertion( "EFO:0000840") AnnotationAssertion( "EMAPA:19252") AnnotationAssertion( "EV:0100077") AnnotationAssertion( "FMA:7201") AnnotationAssertion( "GAID:306") AnnotationAssertion( "MA:0000333") AnnotationAssertion( "MESH:A03.492.411.495") AnnotationAssertion( "MIAA:0000046") AnnotationAssertion( "NCIT:C12379") AnnotationAssertion( "OpenCyc:Mx4rvVkF5pwpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Large_Intestine") "UMLS:C0021851") AnnotationAssertion( "VHOG:0000054") AnnotationAssertion( "XAO:0000131") AnnotationAssertion( "galen:LargeIntestine") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0000706") "intestinum crassum") AnnotationAssertion( "UBERON:0000059") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "large intestine") SubClassOf(Annotation( "cjm"^^xsd:string) ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (anatomical wall) AnnotationAssertion(Annotation( "FMA:82482") "Organ component adjacent to an organ cavity and which consists of a maximal aggregate of organ component layers.") AnnotationAssertion(Annotation( "FMA"^^xsd:string) "in FMA, serosa is a wall") AnnotationAssertion( "UBERON:0009915") AnnotationAssertion( "wall") AnnotationAssertion( "EMAPA:25036") AnnotationAssertion( "FMA:82482") AnnotationAssertion( "galen:Wall") AnnotationAssertion(Annotation( "FMA:82482") "wall of organ") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:82482") "organ wall") AnnotationAssertion( "UBERON:0000060") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "anatomical wall") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (anatomical structure) AnnotationAssertion(Annotation( "CARO:0000003") "Material anatomical entity that is a single connected structure with inherent 3D shape generated by coordinated expression of the organism's own genome.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010825") AnnotationAssertion( "AEO:0000003") AnnotationAssertion( "BILA:0000003") AnnotationAssertion( "CARO:0000003") AnnotationAssertion( "EHDAA2:0003003") AnnotationAssertion( "EMAPA:0") AnnotationAssertion( "FBbt:00007001") AnnotationAssertion( "FMA:305751") AnnotationAssertion( "FMA:67135") AnnotationAssertion( "GAID:781") AnnotationAssertion( "HAO:0000003") AnnotationAssertion( "MA:0003000") AnnotationAssertion( "MESH:D000825") AnnotationAssertion( "TAO:0000037") AnnotationAssertion( "TGMA:0001823") AnnotationAssertion( "VHOG:0001759") AnnotationAssertion( "XAO:0003000") AnnotationAssertion( "ZFA:0000037") AnnotationAssertion( "biological structure") AnnotationAssertion(Annotation( "CARO:0000003") "connected biological structure") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0000061") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "anatomical structure") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (organ) AnnotationAssertion(Annotation( ) "Anatomical structure that performs a specific function or group of functions [WP].") AnnotationAssertion(Annotation( "Wikipedia"^^xsd:string) ) AnnotationAssertion(Annotation( "GO:0048513") "Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions.") AnnotationAssertion( "CARO v1 does not include a generic 'organ' class, only simple and compound organ. CARO v2 may include organ, see https://github.com/obophenotype/caro/issues/4") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:4") AnnotationAssertion( "CARO:0020004") AnnotationAssertion( "EFO:0000634") AnnotationAssertion( "EMAPA:35949") AnnotationAssertion( "ENVO:01000162") AnnotationAssertion( "FMA:67498") AnnotationAssertion( "MA:0003001") AnnotationAssertion( "NCIT:C13018") AnnotationAssertion( "OpenCyc:Mx4rv5XMb5wpEbGdrcN5Y29ycA") AnnotationAssertion( "OpenCyc:Mx4rwP3iWpwpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Organ") "UMLS:C0178784") AnnotationAssertion( "WBbt:0003760") AnnotationAssertion( "uberon") AnnotationAssertion( "anatomical unit") AnnotationAssertion( "body organ") AnnotationAssertion(Annotation( ) "element") AnnotationAssertion( "UBERON:0000062") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "organ") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses( ) DisjointClasses( ) # Class: (organ subunit) AnnotationAssertion(Annotation( ) "A part of an organ that constitutes a distinct modular sub-unit. In some cases, the organ may also contain other sub-units of identical or similar types, in other cases this may be a distinct entity.") AnnotationAssertion( "FMA distinguishes segment from zone by whether the fiat boundaries are fixed/anchored (segments) or floating (zone). It's not completely clear how to apply this distinction") AnnotationAssertion(Annotation( "FMA:86140") Annotation( "3") "Organ region with one or more anchored fiat boundaries. Examples: artery, trunk of nerve, cervical part of esophagus, pelvic part of vagina, horn of thyroid cartilage, anterior segment of eyeball.") AnnotationAssertion(Annotation( "FMA:86140") Annotation( "1") "Organ region with one or more fixed or anchored fiat boundaries. Examples: artery, trunk of nerve, cervical part of esophagus, pelvic part of vagina, horn of thyroid cartilage, anterior segment of eyebal.") AnnotationAssertion( "FMA:86140") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:86140") "organ region with fixed fiat boundary") AnnotationAssertion(Annotation( "FMA:86140") "organ segment") AnnotationAssertion(Annotation( "FMA:86140") "segment of organ") AnnotationAssertion( "UBERON:0000063") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "organ subunit") SubClassOf( ) # Class: (organ part) AnnotationAssertion(Annotation( ) "A multicellular structure that is a part of an organ.") AnnotationAssertion( "currently defined in a very broad sense, may be replaced by more specific classes in the future") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0011124") AnnotationAssertion( "BIRNLEX:16") AnnotationAssertion( "EFO:0000635") AnnotationAssertion( "FMA:82472") AnnotationAssertion(Annotation( "FMA:82472") "cardinal organ part") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BIRNLEX:16") "regional part of organ") AnnotationAssertion( "UBERON:0000064") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "organ part") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (respiratory tract) AnnotationAssertion(Annotation( ) "Anatomical structure that is part of the respiratory system. In mammals consists of upper and lower tracts.") AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0001606") AnnotationAssertion( "EHDAA:1568") AnnotationAssertion( "EHDAA:2219") AnnotationAssertion( "EMAPA:16737") AnnotationAssertion( "FMA:265130") AnnotationAssertion( "OpenCyc:Mx4rvvM--pwpEbGdrcN5Y29ycA") AnnotationAssertion( "VHOG:0000393") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0000065") AnnotationAssertion(rdfs:label "respiratory tract") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "NCBIBook:NBK10107") ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (fully formed stage) AnnotationAssertion(Annotation( ) "The stage of development at which the animal is fully formed, including immaturity and maturity. Includes both sexually immature stage, and adult stage.") AnnotationAssertion( "adult stage") AnnotationAssertion( "BTO:0001043") AnnotationAssertion( "BilaDO:0000004") AnnotationAssertion( "EFO:0001272") AnnotationAssertion( "FBdv:00005369") AnnotationAssertion( "WBls:0000041") AnnotationAssertion( "XtroDO:0000084") AnnotationAssertion( "fully formed animal stage") AnnotationAssertion( "juvenile-adult stage") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0000066") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "fully formed stage") AnnotationAssertion(rdfs:seeAlso "https://github.com/obophenotype/uberon/issues/566"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete embryo stage part) AnnotationAssertion(Annotation( ) "A stage that is part of the embryo stage.") AnnotationAssertion( "embryonic stage part") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0000067") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "obsolete embryo stage part") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (embryo stage) AnnotationAssertion(Annotation( ) "A life cycle stage that starts with fertilization and ends with the fully formed embryo.") AnnotationAssertion( ) AnnotationAssertion( "BilaDO:0000002") AnnotationAssertion( "EV:0300001") AnnotationAssertion( "FBdv:00005289") AnnotationAssertion( "FMA:72652") AnnotationAssertion( "HsapDv:0000002") AnnotationAssertion( "MmusDv:0000002") AnnotationAssertion( "OGES:000000") AnnotationAssertion( "OGES:000022") AnnotationAssertion( "WBls:0000003") AnnotationAssertion( "WBls:0000092") AnnotationAssertion( "WBls:0000102") AnnotationAssertion( "XAO:1000012") AnnotationAssertion( "embryonic stage") AnnotationAssertion( "uberon") AnnotationAssertion( "embryogenesis") AnnotationAssertion( "UBERON:0000068") AnnotationAssertion(rdfs:label "embryo stage") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses( ) # Class: (larval stage) AnnotationAssertion(Annotation( ) "A distinct juvenile stage many animals undergo before metamorphosis into adults. Animals with indirect development such as insects, amphibians, or cnidarians typically have a larval phase of their life cycle.") AnnotationAssertion( "Uberon includes clade-specific subclasses, e.g. nematod larva") AnnotationAssertion( ) AnnotationAssertion(Annotation( "WP"^^xsd:string) "It is a misunderstanding that the larval form always reflects the group's evolutionary history. It could be the case, but often the larval stage has evolved secondarily, as in insects. In these cases the larval form might differ more from the group's common origin than the adult form") AnnotationAssertion( ) AnnotationAssertion( "BTO:0000915") AnnotationAssertion( "BTO:0000954") AnnotationAssertion( "EFO:0001303") AnnotationAssertion( "FBdv:00005336") AnnotationAssertion( "MIAA:0000400") AnnotationAssertion( "OGES:000008") AnnotationAssertion( "ZFS:0000048") AnnotationAssertion( "larva stage") AnnotationAssertion(Annotation( ) Annotation( ) "ammocoete") AnnotationAssertion(Annotation( ) Annotation( ) "ammocoete stage") AnnotationAssertion(Annotation( ) Annotation( ) "bipinnaria") AnnotationAssertion(Annotation( ) Annotation( ) "bipinnaria stage") AnnotationAssertion(Annotation( ) Annotation( ) "caterpillar") AnnotationAssertion(Annotation( ) Annotation( ) "caterpillar stage") AnnotationAssertion(Annotation( ) Annotation( ) "glochidium") AnnotationAssertion(Annotation( ) Annotation( ) "glochidium stage") AnnotationAssertion(Annotation( ) Annotation( ) "grub") AnnotationAssertion(Annotation( ) Annotation( ) "grub stage") AnnotationAssertion(Annotation( ) Annotation( ) "leptocephalus") AnnotationAssertion(Annotation( ) Annotation( ) "leptocephalus stage") AnnotationAssertion(Annotation( ) Annotation( ) "maggot") AnnotationAssertion(Annotation( ) Annotation( ) "maggot stage") AnnotationAssertion(Annotation( "BTO:0000859") Annotation( ) "metacestode") AnnotationAssertion(Annotation( ) Annotation( ) "naiad, nymph") AnnotationAssertion(Annotation( ) Annotation( ) "naiad, nymph stage") AnnotationAssertion(Annotation( ) Annotation( ) "nauplius") AnnotationAssertion(Annotation( ) Annotation( ) "nauplius stage") AnnotationAssertion(Annotation( ) Annotation( ) "nymph") AnnotationAssertion(Annotation( ) Annotation( ) "nymph stage") AnnotationAssertion(Annotation( ) Annotation( ) "planula") AnnotationAssertion(Annotation( ) Annotation( ) "planula stage") AnnotationAssertion(Annotation( "NCBITaxon:10219") Annotation( ) "tornaria") AnnotationAssertion(Annotation( ) Annotation( ) "trochophore") AnnotationAssertion(Annotation( ) Annotation( ) "trochophore stage") AnnotationAssertion(Annotation( ) Annotation( ) "veliger") AnnotationAssertion(Annotation( ) Annotation( ) "veliger stage") AnnotationAssertion(Annotation( ) Annotation( ) "wriggler") AnnotationAssertion(Annotation( ) Annotation( ) "wriggler stage") AnnotationAssertion(Annotation( ) Annotation( ) "zoea") AnnotationAssertion(Annotation( ) Annotation( ) "zoea stage") AnnotationAssertion( "uberon") AnnotationAssertion( "larva") AnnotationAssertion( "UBERON:0000069") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "larval stage") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pupal stage) AnnotationAssertion(Annotation( ) Annotation( ) "A life cycle stage of holometabolous insects in which the organism is a pupa and starts with the larval-pupal apolysis and ends with pupal-adult apolysis.") AnnotationAssertion( "The pupal stage is found only in holometabolous insects, those that undergo a complete metamorphosis, going through four life stages; embryo, larva, pupa and imago") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FBdv:00005349") AnnotationAssertion( "pupa stage") AnnotationAssertion(Annotation( ) Annotation( "NCBITaxon:37572") "aurelia stage") AnnotationAssertion(Annotation( ) Annotation( "NCBITaxon:37572") "chrysalides stage") AnnotationAssertion(Annotation( ) Annotation( "NCBITaxon:37572") "chrysalis stage") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0000070") AnnotationAssertion(rdfs:label "pupal stage") AnnotationAssertion(rdfs:seeAlso "https://github.com/obophenotype/uberon/issues/562"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (death stage) AnnotationAssertion(Annotation( "XAO:0000437") "End of the life of an organism.") AnnotationAssertion(Annotation( "ncit"^^xsd:string) "ncit:Death is an outcome") AnnotationAssertion( "XAO:0000437") AnnotationAssertion( "XtroDO:0000085") AnnotationAssertion( "uberon") AnnotationAssertion( "death") AnnotationAssertion( "UBERON:0000071") AnnotationAssertion(rdfs:label "death stage") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (proximo-distal subdivision of respiratory tract) AnnotationAssertion(Annotation( ) "An section of a respiratory tract.") AnnotationAssertion(Annotation( "MA"^^xsd:string) "MA:0000434 has subclasses upper and lower, so it corresponds to a segment of the tract, rather than the tract as a whole") AnnotationAssertion( "EMAPA:16737") AnnotationAssertion( "FMA:45660") AnnotationAssertion( "MA:0000434") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "MA:0000434") "respiratory tract") AnnotationAssertion( "subdivision of respiratory tract") AnnotationAssertion( "UBERON:0000072") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "proximo-distal subdivision of respiratory tract") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (regional part of nervous system) AnnotationAssertion(Annotation( "BIRNLEX:1157") "Any part or collection of parts of the central or peripheral nervous system. Parts may span both CNS and PNS.") AnnotationAssertion( "Melissa Haendel") AnnotationAssertion( "2009-06-18T09:00:04Z") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:1157") AnnotationAssertion( "NCIT:C13040") AnnotationAssertion(Annotation( "ncithesaurus:Nervous_System_Part") "UMLS:C1518256") AnnotationAssertion(Annotation( "BIRNLEX:1157") "part of nervous system") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0000073") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "regional part of nervous system") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (renal glomerulus) AnnotationAssertion(Annotation( ) Annotation( "MP:0005325") "A capillary tuft which forms a close network with the visceral epithelium (podocytes) and the mesangium to form the filtration barrier and is surrounded by Bowman's capsule in nephrons of the vertebrate kidney[GO].") AnnotationAssertion(Annotation( "ZFA"^^xsd:string) "ZFA - The multi-tissue structure where the glomerular basement membrane supported by mesonephric podocytes filters blood from the glomerular capillaries. GUDMAP: 'Together, the Bowman's capsule and the glomerulus comprise the definitive renal corpuscle.' - here the glomerulus is part of the capsule?") AnnotationAssertion( "Melissa Haendel") AnnotationAssertion( "2009-06-18T09:26:37Z") AnnotationAssertion( "glomerulus") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0000530") AnnotationAssertion( "CALOHA:TS-0862") AnnotationAssertion( "EFO:0003667") AnnotationAssertion( "EMAPA:28329") AnnotationAssertion( "EV:0100386") AnnotationAssertion( "FMA:15624") AnnotationAssertion( "MA:0001657") AnnotationAssertion( "MESH:D007678") AnnotationAssertion( "NCIT:C13250") AnnotationAssertion( "TAO:0001288") AnnotationAssertion(Annotation( "ncithesaurus:Glomerulus") "UMLS:C0022663") AnnotationAssertion( "ZFA:0001288") AnnotationAssertion(Annotation( "TAO:0001288") "renal glomeruli") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0000530") Annotation( ) "Malphigian glomerulus") AnnotationAssertion(Annotation( ) "Malpighian glomerulus") AnnotationAssertion(Annotation( ) "Malpighian tuft") AnnotationAssertion(Annotation( "ZFA:0001288") "glomerular capillary tuft") AnnotationAssertion(Annotation( ) "glomerular tuft") AnnotationAssertion(Annotation( ) Annotation( ) "glomerulus renis") AnnotationAssertion(Annotation( ) "renal corpuscle") AnnotationAssertion( "UBERON:0000074") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "renal glomerulus") AnnotationAssertion( "Renal:corpuscle.svg"^^xsd:anyURI) AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/3/30/Gray1130.svg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) Annotation( "MA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses( ) # Class: (subdivision of skeletal system) AnnotationAssertion(Annotation( ) Annotation( "UBERONREF:0000003"^^xsd:string) "Anatomical cluster consisting of the skeletal elements and articular elements that are part of an individual subdivision of the organism.") AnnotationAssertion( "UBERON:0010322") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:85544") AnnotationAssertion( "NCIT:C34076") AnnotationAssertion(Annotation( "ncithesaurus:Skeletal_System_Part") "UMLS:C1519343") AnnotationAssertion( "galen:ComplexSkeletalStructure") AnnotationAssertion(Annotation( "FMA:85544") "skeletal system subdivision") AnnotationAssertion( "uberon") AnnotationAssertion( "skeletal system part") AnnotationAssertion( "UBERON:0000075") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "subdivision of skeletal system") SubClassOf(Annotation( "cjm"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (external ectoderm) AnnotationAssertion(Annotation( "MGI:anna"^^xsd:string) Annotation( "MP:0012532") "The surface (external) layer of ectoderm which begins to proliferate shortly after separation from the neuroectoderm.") AnnotationAssertion( "merge with non-neural. In vertebrates, the ectoderm has three parts: external ectoderm (also known as surface ectoderm), the neurectoderm (neural crest, and neural tube)") AnnotationAssertion( "(or external ectoderm) forms the following structures: Skin Epithelium of the mouth and nasal cavity saliavary glands, and glands of mouth and nasal cavity Enamel - as a side note dentin and dental pulp are formed from ectomesenchyme which is derived from ectoderm Epithelium of pineal and pituitary glands Lens and cornea of the eye Apical ectodermal ridge inducing development of the limb buds of the embryo. Sensory receptors in epidermis") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0001968") AnnotationAssertion( "EHDAA:1494") AnnotationAssertion( "EHDAA:350") AnnotationAssertion( "EHDAA:4784") AnnotationAssertion( "EHDAA:4790") AnnotationAssertion( "EHDAA:4796") AnnotationAssertion( "EHDAA:7860") AnnotationAssertion( "EMAPA:16096") AnnotationAssertion( "FMA:87656") AnnotationAssertion( "NCIT:C34309") AnnotationAssertion(Annotation( "ncithesaurus:Surface_Ectoderm") "UMLS:C1515087") AnnotationAssertion( "surface (external) ectoderm") AnnotationAssertion(Annotation( "MP:0012532") "surface ectoderm") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0000076") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "external ectoderm") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/1/1d/Ectoderm.png"^^xsd:anyURI) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ) SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (mixed endoderm/mesoderm-derived structure) AnnotationAssertion(Annotation( ) "An anatomical structure that develops from the endoderm and the mesoderm.") AnnotationAssertion( "Grouping term for query purposes. Notes that the developmental relationships are being refined such that most structures should develop in whole from at most one layer, but may have contributions from multiple") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0000077") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "mixed endoderm/mesoderm-derived structure") SubClassOf( ) SubClassOf( ) # Class: (mixed ectoderm/mesoderm/endoderm-derived structure) AnnotationAssertion(Annotation( ) "An anatomical structure that develops from the ectoderm, mesoderm and endoderm.") AnnotationAssertion( "Grouping term for query purposes. Notes that the developmental relationships are being refined such that most structures should develop in whole from at most one layer, but may have contributions from multiple") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0000078") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "mixed ectoderm/mesoderm/endoderm-derived structure") SubClassOf( ) SubClassOf( ) # Class: (male reproductive system) AnnotationAssertion(Annotation( "MP:0001145") "The organs associated with producing offspring in the gender that produces spermatozoa.") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000725") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0792383369 Lombardi J, Comparative vertebrate reproduction (1998) p.43") "By far, sexual reproduction is the more common pattern among living vertebrate forms and its widespread occurrence suggests that it is the plesiomorphic, or primitive, reproductive mode among the vertebrates.[well established][VHOG]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0000082") AnnotationAssertion( "CALOHA:TS-1310") AnnotationAssertion( "EFO:0000970") AnnotationAssertion( "EHDAA2:0001054") AnnotationAssertion( "EHDAA:8136") AnnotationAssertion( "EMAPA:17968") AnnotationAssertion( "EV:0100101") AnnotationAssertion( "FBbt:00004927") AnnotationAssertion( "FMA:45664") AnnotationAssertion( "GAID:386") AnnotationAssertion( "HAO:0000505") AnnotationAssertion( "MA:0000396") AnnotationAssertion( "MESH:D005837") AnnotationAssertion( "NCIT:C12722") AnnotationAssertion( "OpenCyc:Mx4rvViCepwpEbGdrcN5Y29ycA") AnnotationAssertion( "TGMA:0000634") AnnotationAssertion(Annotation( "ncithesaurus:Male_Genitalia") "UMLS:C0017422") AnnotationAssertion(Annotation( "ncithesaurus:Male_Reproductive_System") "UMLS:C1963704") AnnotationAssertion( "VHOG:0000725") AnnotationAssertion( "XAO:0000155") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "genitalia of male organism") AnnotationAssertion(Annotation( "FMA:45664") "male genital system") AnnotationAssertion( "male genitalia") AnnotationAssertion( "male genitals") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "male organism genitalia") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "male organism reproductive system") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "reproductive system of male organism") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0000082") "male genital organ") AnnotationAssertion( "male genital tract") AnnotationAssertion(Annotation( "MA:0000396") "male reproductive tract") AnnotationAssertion(Annotation( "BTO:0000082") "systema genitale masculinum") AnnotationAssertion( "UBERON:0000079") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "male reproductive system") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses( ) # Class: (mesonephros) AnnotationAssertion(Annotation( ) Annotation( "GO:0001823") "The second stage of the kidney. It serves as the main excretory organ of aquatic vertebrates and as a temporary embryonic kidney in higher vertebrates. It is composed of the mesonephric duct (also called the Wolffian duct), mesonephric tubules, and associated capillary tufts. A single tubule and its associated capillary tuft is called a mesonephric excretory unit; these units are similar in structure and function to nephrons of the adult kidney. The mesonephros is derived from intermediate mesoderm in the vertebrate embryo.") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000038") Annotation( "VHOG"^^xsd:string) Annotation( ) "A kidney formed of nephric tubules arising in the middle region of the nephric ridge; a transient embryonic stage that replaces the pronephros, but is itself replaced by the adult metanephros [in mammals; in fishes and amphibians it is the adult kidney]. [Evolution, Fourth_Edition_(2006)_McGraw-Hill, Function, Kardong_KV, Vertebrates:_Comparative_Anatomy, p.745][VHOG]") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0010384") Annotation( "AAO"^^xsd:string) Annotation( "AAO:BJB"^^xsd:string) "Organ that is the definitive adult kidney. It replaces the earlier pronephros, which degenerates as the mesonephros becomes functional in feeding stage tadpoles.[AAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000038") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0030223693 Liem KF, Bemis WE, Walker WF, Grande L, Functional Anatomy of the Vertebrates: An Evolutionary Perspective (2001) p.639") "As the pronephros regresses, the archinephric duct induces the sequential differentiation of tubules in the more caudal parts of the nephric ridge. (...) Tubules that differentiate in the middle part of the nephric ridge form a kidney called the mesonephros. This kidney functions in the embryos and larvae of all vertebrates. (...) In all vertebrate embryos, the kidney begins with the differentiation of a few renal tubules from the anterior end of the nephric ridge overlying the pericardial cavity. (...) This early-developing embryonic kidney is called the pronephros.[well established][VHOG]") AnnotationAssertion( "mesonephric") AnnotationAssertion( "In mammals, the mesonephros is the second of the three embryonic kidneys to be established and exists only transiently. In fish and amphibians, the mesonephros will form the mature kidney") AnnotationAssertion( "By contrast to the pronephros, the histological features of the mammalian mesonephros, with its primitive glomeruli, suggest that it probably functions as a primitive kidney, and is involved in the production of much of the amniotic fluid. Within the two mesonephroi, one located on either side of the dorsal mesentery of the hindgut, a substantial number (in the region of about 40 or more) of cranio-caudally segmented mesonephric tubules are formed. It has, however, been suggested that only the most rostrally located 4-6 pairs of mesonephric tubules drain into the mesonephric portion of the nephric duct. This is now seen to extend along the length of the mesonephroi, being located towards their lateral sides. The mesonephros is also retained over a considerably longer period than the pronephros, but gradually undergoes regression in a cranio-caudal direction. While the rostral part displays clear evidence of regression its more caudal part appears to display evidence of functional activity. Within the medial part of the mesonephros, vesicles are formed, although no glomeruli are formed there in this species. It is, however, difficult to believe that the relatively enormous mesonephroi do not have an excretory role in the mouse, only serving as a base for gonadal differentiation. In the human embryo, the medial part of the mesonephric tubules enlarges, become invaginated by capillaries, and form glomeruli. These then take on an excretory role. In the mouse, the mesonephric ducts appear to be patent throughout their length[GUDMAP, modified]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010384") AnnotationAssertion( "BTO:0001542") AnnotationAssertion( "CALOHA:TS-0624") AnnotationAssertion( "EFO:0000928") AnnotationAssertion( "EHDAA2:0001130") AnnotationAssertion( "EHDAA:1581") AnnotationAssertion( "EHDAA:5903") AnnotationAssertion( "EMAPA:16744") AnnotationAssertion( "FMA:72171") AnnotationAssertion( "GAID:1308") AnnotationAssertion( "MESH:D001755") AnnotationAssertion( "NCIT:C26467") AnnotationAssertion( "TAO:0000529") AnnotationAssertion(Annotation( "ncithesaurus:Mesonephros") "UMLS:C0025492") AnnotationAssertion( "VHOG:0000038") AnnotationAssertion( "XAO:0000141") AnnotationAssertion( "ZFA:0000529") AnnotationAssertion(Annotation( ) Annotation( "BTO:0001542") Annotation( "GOC:yaf") Annotation( "MESH:A16.254.500") "Wolffian body") AnnotationAssertion(Annotation( "XAO:0000141") "mesonephric kidney") AnnotationAssertion(Annotation( ) Annotation( ) "mesonephroi") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "XAO:0000141") "amphibian adult kidney") AnnotationAssertion(Annotation( "BTO:0001542") "corpus Wolffi") AnnotationAssertion(Annotation( "BTO:0001542") "middle kidney") AnnotationAssertion(Annotation( "VHOG:0000038") Annotation( "XAO:0000141") "opisthonephros") AnnotationAssertion( "opisto nephros") AnnotationAssertion(Annotation( ) "opistonephros") AnnotationAssertion( "UBERON:0000080") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "mesonephros") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/a/ad/Gray986.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (metanephros) AnnotationAssertion(Annotation( ) Annotation( "GO:0001656") "In mammals, the metanephros is the excretory organ of the fetus, which develops into the mature kidney and is formed from the rear portion of the nephrogenic cord. The metanephros is an endocrine and metabolic organ that filters the blood and excretes the end products of body metabolism in the form of urine[GO].") AnnotationAssertion( "TODO check developmental relationships") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000039") Annotation( "VHOG"^^xsd:string) Annotation( ) "A kidney formed of nephric tubules arising in the posterior region of the nephric ridge and drained by a ureter; replaces the embryonic pronephros and mesonephros [in mammals]. [Evolution, Fourth_Edition_(2006)_McGraw-Hill, Function, Kardong_KV, Vertebrates:_Comparative_Anatomy, p.745][VHOG]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000039") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0072528305 Kardong KV, Vertebrates: Comparative Anatomy, Function, Evolution (2006) p.543") "The ureteric diverticulum grows dorsally into the posterior region of the nephric ridge. Here it enlarges and stimulates the growth of metanephric tubules that come to make up the metanephric kidney. The metanephros becomes the adult kidney of amniotes.[well established][VHOG]") AnnotationAssertion( "metanephric") AnnotationAssertion( "During the fifth week of gestation, the mesonephric duct develops an outpouching, the ureteric bud, near its attachment to the cloaca. This bud, also called the metanephrogenic diverticulum, grows posteriorly and towards the head of the embryo. The elongated stalk of the ureteric bud, the metanephric duct, later forms the ureter. As the cranial end of the bud extends into the intermediate mesoderm, it undergoes a series of branchings to form the collecting duct system of the kidney. It also forms the major and minor calyces and the renal pelvis") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0001543") AnnotationAssertion( "EHDAA2:0001137") AnnotationAssertion( "EHDAA:3089") AnnotationAssertion( "EHDAA:5911") AnnotationAssertion( "EMAPA:17373") AnnotationAssertion( "EMAPA_RETIRED:17207") AnnotationAssertion( "FMA:72172") AnnotationAssertion( "NCIT:C34209") AnnotationAssertion(Annotation( "ncithesaurus:Metanephros") "UMLS:C0231049") AnnotationAssertion( "VHOG:0000039") AnnotationAssertion(Annotation( "BTO:0001543") "metanephron") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0001543") "definite kidney") AnnotationAssertion(Annotation( "BTO:0001543") "definitive kidney") AnnotationAssertion(Annotation( "BTO:0001543") "hind kidney") AnnotationAssertion(Annotation( "VHOG:0000039") "metanephric kidney") AnnotationAssertion( "UBERON:0000081") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "metanephros") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "definitional"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "GO"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "ISBN:9780878932504") ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (adult mammalian kidney) AnnotationAssertion(Annotation( ) Annotation( ) "A kidney at the most advanced stage of development in a mammal.") AnnotationAssertion( ) AnnotationAssertion( "BTO:0000671") AnnotationAssertion( "CALOHA:TS-0510") AnnotationAssertion( "EFO:0000929") AnnotationAssertion( "EV:0100096") AnnotationAssertion( "FMA:7203") AnnotationAssertion( "GAID:423") AnnotationAssertion( "MA:0000368") AnnotationAssertion( "MAT:0000119") AnnotationAssertion( "MESH:D007668") AnnotationAssertion( "MIAA:0000119") AnnotationAssertion( "NCIT:C12415") AnnotationAssertion( "OpenCyc:Mx4rvVjlYpwpEbGdrcN5Y29ycA") AnnotationAssertion( "galen:Kidney") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0000082") AnnotationAssertion(rdfs:label "adult mammalian kidney") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (mesonephric tubule) AnnotationAssertion(Annotation( ) "A mesonephric tubule is an epithelial tube that is part of the mesonephros[GO]. Genital ridge that is next to the mesonephros[WP].") AnnotationAssertion( "TODO check") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000500") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( ) "Any of the renal tubules composing the mesonephros. In mammals they function as excretory structures during the early embryonic development but are later incorporated into the reproductive system. [TFD][VHOG]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000500") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0030223693 Liem KF, Bemis WE, Walker WF, Grande L, Functional Anatomy of the Vertebrates: An Evolutionary Perspective (2001) p.639") "As the pronephros regresses, the archinephric duct induces the sequential differentiation of tubules in the more caudal parts of the nephric ridge. (...) Tubules that differentiate in the middle part of the nephric ridge form a kidney called the mesonephros. This kidney functions in the embryos and larvae of all vertebrates.[well established][VHOG]") AnnotationAssertion( ) AnnotationAssertion( "AAO:0010389") AnnotationAssertion( "EHDAA2:0001134") AnnotationAssertion( "EMAPA:16747") AnnotationAssertion( "VHOG:0000500") AnnotationAssertion( "XAO:0000148") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "VHOG:0000500") Annotation( ) "renal tubules") AnnotationAssertion(Annotation( ) Annotation( ) "tubuli mesonephrici") AnnotationAssertion( "UBERON:0000083") AnnotationAssertion(rdfs:label "mesonephric tubule") SubClassOf( ) SubClassOf( ) SubClassOf( ) # Class: (ureteric bud) AnnotationAssertion(Annotation( ) Annotation( "MP:0010979") "An epithelial swelling on the Wolffian duct that elongates to invade the adjacent metanephric mesenchyme[MP].") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000541") Annotation( "VHOG"^^xsd:string) Annotation( ) "Outgrowth of the mesonephric duct that penetrates the metanephric mesoderm and forms the ureter, renal pelvis, major and minor calyces and collecting ducts. [Embryology, See_Dudek_RW_and_Fix_JD, Third_Edition_(2004)_Philadelphia:_Lippincott_William_and_Wilkins, p.137][VHOG]") AnnotationAssertion(Annotation( "VHOG:0000541") "Outgrowth of the mesonephric duct that penetrates the metanephric mesoderm and forms the ureter, renal pelvis, major and minor calyces and collecting ducts[VHOG:0000541].") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000541") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0072528305 Kardong KV, Vertebrates: Comparative Anatomy, Function, Evolution (2006) p.543") "The first embryonic hint of a metanephros is the formation of the metanephric duct that appears as a ureteric diverticulum arising at the base of preexisting mesonephric duct. The ureteric diverticulum grows dorsally into the posterior region of the nephric ridge. Here it enlarges and stimulates the growth of metanephric tubules that come to make up the metanephric kidney. The metanephros becomes the adult kidney of amniotes, and the metanephric duct is usually called the ureter.[well established][VHOG]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0001646") AnnotationAssertion( "EHDAA2:0002140") AnnotationAssertion( "EHDAA:3091") AnnotationAssertion( "EHDAA:5917") AnnotationAssertion( "EMAPA:17209") AnnotationAssertion( "NCIT:C34207") AnnotationAssertion(Annotation( "ncithesaurus:Metanephric_Diverticulum") "UMLS:C1284058") AnnotationAssertion( "VHOG:0000541") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0001646") "diverticulum") AnnotationAssertion(Annotation( ) Annotation( ) "diverticulum metanephricum") AnnotationAssertion(Annotation( ) Annotation( ) "gemma ureterica") AnnotationAssertion(Annotation( "BTO:0001646") "metanephric bud") AnnotationAssertion(Annotation( ) "metanephric diverticulum") AnnotationAssertion( "ureteric ampulla") AnnotationAssertion(Annotation( "VHOG:0000541") "ureteric diverticulum") AnnotationAssertion( "UBERON:0000084") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "ureteric bud") SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "ISBN:9780878932504") ObjectSomeValuesFrom( )) # Class: (morula) AnnotationAssertion(Annotation( "MP:0012130") "A spherical embryonic mass of blastomeres formed before the blastula and resulting from cleavage of the fertilized ovum.") AnnotationAssertion(Annotation( "EHDAA2"^^xsd:string) "EHDAA2 has embryo starting later") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0001508") AnnotationAssertion( "EHDAA2:0000005") AnnotationAssertion( "FMA:292334") AnnotationAssertion( "GAID:1295") AnnotationAssertion( "MESH:A16.254.270.550") AnnotationAssertion( "NCIT:C34212") AnnotationAssertion(Annotation( "ncithesaurus:Morula") "UMLS:C0026573") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "EHDAA2:0000005") "morula (2-16 cells)") AnnotationAssertion( "UBERON:0000085") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "morula") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/c/c6/Blastulation.png"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (zona pellucida) AnnotationAssertion(Annotation( ) "A glycoprotein membrane surrounding the plasma membrane of an oocyte. It is a vital constitutive part of the latter, external but not extraneous to it. The zona pellucida first appears in multilaminar primary oocytes.") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000720") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0072528305 Kardong KV, Vertebrates: Comparative Anatomy, Function, Evolution (2006) p.159") "Outside the plasma membrane, three envelopes surround the ovum. The first, the primary egg envelope, lies between the plasma membrane and the surrounding cells of the ovary. The most consistent component of this primary layer is the vitelline membrane, a transparent jacket of fibrous protein. In mammals, the homologous structure is called the zona pellucida.[well established][VHOG]") AnnotationAssertion(Annotation( "VHOG:0000720") "zona pellucida - vitelline membrane") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0003135") AnnotationAssertion( "EHDAA2:0002220") AnnotationAssertion( "EHDAA:31") AnnotationAssertion( "EHDAA:62") AnnotationAssertion( "EMAPA:16035") AnnotationAssertion( "FMA:18674") AnnotationAssertion( "GAID:410") AnnotationAssertion( "MA:0001715") AnnotationAssertion( "MESH:D015044") AnnotationAssertion( "NCIT:C33896") AnnotationAssertion( "TAO:0001111") AnnotationAssertion(Annotation( "ncithesaurus:Zona_Pellucida") "UMLS:C0043519") AnnotationAssertion( "VHOG:0000720") AnnotationAssertion( "ZFA:0001111") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0003135") "oolemma") AnnotationAssertion(Annotation( "BTO:0003135") "pellucid zone") AnnotationAssertion(Annotation( "BTO:0003135") "striated membrane") AnnotationAssertion( "vitelline envelope") AnnotationAssertion( "vitelline membrane") AnnotationAssertion(Annotation( "BTO:0003135") "zona radiata") AnnotationAssertion(Annotation( "BTO:0003135") "zona striata") AnnotationAssertion( "UBERON:0000086") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "zona pellucida") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/8/81/Gray3.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (inner cell mass) AnnotationAssertion(Annotation( "ISBN:0-683-40008-8"^^xsd:string) Annotation( "MGI:pvb") "A mass of cells that develop into the body of the embryo and some extraembryonic tissues.") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000742") Annotation( "VHOG"^^xsd:string) Annotation( ) "A group of cells found in the mammalian blastocyst that give rise to the embryo. [Biology_Online][VHOG]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000742") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0030223693 Liem KF, Bemis WE, Walker WF, Grande L, Functional Anatomy of the Vertebrates: An Evolutionary Perspective (2001) p.144") "A small sphere of cells known as the inner cell mass lies within the trophoblast (of all eutherian mammals).[well established][VHOG]") AnnotationAssertion( "This structure forms in the earliest steps of development, before implantation into the endometrium of the uterus has occurred.The ICM lies within the blastocyst cavity and is entirely surrounded by the single layer of cells called trophoblast. [Wikipedia:Inner_cell_mass]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EFO:0000547") AnnotationAssertion( "EHDAA2:0000830") AnnotationAssertion( "EHDAA:40") AnnotationAssertion( "EMAPA:16041") AnnotationAssertion( "FMA:86557") AnnotationAssertion( "NCIT:C13740") AnnotationAssertion(Annotation( "ncithesaurus:Inner_Cell_Mass") "UMLS:C1283994") AnnotationAssertion( "VHOG:0000742") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "VHOG:0000742") "ICM") AnnotationAssertion(Annotation( "FMA:86557") "early embryoblast") AnnotationAssertion( "embryoblast") AnnotationAssertion(Annotation( ) Annotation( ) "embryoblastus; massa cellularis interna; pluriblastus senior") AnnotationAssertion( "pluriblast") AnnotationAssertion( "UBERON:0000087") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "inner cell mass") AnnotationAssertion( "Blastocyst:English.svg"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "Wikipedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "Wikipedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (trophoblast) AnnotationAssertion(Annotation( "ISBN:0-683-40008-8"^^xsd:string) Annotation( "MP:0005031") "The mesectodermal cell layer arising from the trophectoderm that erodes the uterine mucosa and contributes to the formation of the placenta.") AnnotationAssertion(Annotation( "2012-08-23") Annotation( "MP:0005031") Annotation( "trophoblast layer") Annotation( "MP") Annotation( "ISBN:0-683-40008-8") "the mesectodermal cell layer arising from the trophectoderm that erodes the uterine mucosa and contributes to the formation of the placenta[MP]") AnnotationAssertion( "trophoblastic") AnnotationAssertion(Annotation( ) "The postimplantation derivatives of the trophectoderm, which make up most of the fetal part of the placenta") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0001079") AnnotationAssertion( "CALOHA:TS-1070") AnnotationAssertion( "EV:0100120") AnnotationAssertion( "FMA:83029") AnnotationAssertion( "GAID:1152") AnnotationAssertion( "MESH:A11.936") AnnotationAssertion( "NCIT:C93292") AnnotationAssertion(Annotation( "ncithesaurus:Trophoblast") "UMLS:C0041178") AnnotationAssertion(Annotation( "MP:0005031") "trophoblast layer") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "massa cellularis externa") AnnotationAssertion(Annotation( ) Annotation( ) "trophoblastus") AnnotationAssertion(Annotation( "BTO:0001079") "trophoderm") AnnotationAssertion( "UBERON:0000088") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "Aggregate of cells forming the outer layer of a blastocyst, which provide nutrients to the embryo and develop into a large part of the placenta. They are formed during the first stage of pregnancy and are the first cells to differentiate from the fertilized egg. [Wikipedia:Trophoblast]") AnnotationAssertion(rdfs:label "trophoblast") AnnotationAssertion( "Blastocyst:English.svg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (hypoblast (generic)) AnnotationAssertion( "TODO - consider relationship to UBERON:0000091 ! bilaminar disc") AnnotationAssertion( "this term groups together disparate structures with different relationships.") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0010619") Annotation( "AAO"^^xsd:string) Annotation( "AAO:EJS"^^xsd:string) "A primary germ layer that can give rise to both mesoderm and endoderm.[AAO]") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0000117") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "The inner of the two layers of the blastoderm that forms during gastrulation and give rise to the definitive mesoderm and endoderm. Kimmel et al, 1995.[TAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001222") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "DOI:10.1016/j.ydbio.2009.05.543 Takeuchi M, Takahashi M, Okabe M, Aizawa S, Germ layer patterning in bichir and lamprey; an insight into its evolution in vertebrates. Developmental Biology (2009) (reference 1), Darras S, Gerhart J, Terasaki M, Kirschner M, Lowe CJ, Beta-catenin specifies the endomesoderm and defines the posterior organizer of the hemichordate Saccoglossus kowalevskii. Development (2011) (reference 2)") "In mammal and avian, extraembryonic endoderm such as visceral endoderm and hypoblast play essential roles in the embryonic axis formation and germ layer development. These extraembryonic tissues are generally considered to have been created in ancestral amniotes evolved from the Xenopus-type ancestor (reference 1); The endomesoderm secretes as yet unidentified signals that posteriorize the ectoderm, which would otherwise adopt an anterior fate. Our results point to a conserved function at the base of deuterostomes for beta-catenin in germ layer specification and to a causal link in the definition of the posterior part of the embryonic ectoderm by way of activating posteriorizing endomesodermal factors (reference 2).[well established][VHOG]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0000229") AnnotationAssertion( "AAO:0010619") AnnotationAssertion( "BTO:0003953") AnnotationAssertion( "EFO:0001930") AnnotationAssertion( "EMAPA:32762") AnnotationAssertion( "FMA:293873") AnnotationAssertion( "MAT:0000418") AnnotationAssertion( "MIAA:0000418") AnnotationAssertion( "NCIT:C34190") AnnotationAssertion( "TAO:0000117") AnnotationAssertion(Annotation( "ncithesaurus:Hypoblast") "UMLS:C1512561") AnnotationAssertion( "VHOG:0001222") AnnotationAssertion( "XAO:0003044") AnnotationAssertion( "ZFA:0000117") AnnotationAssertion(Annotation( "VHOG:0001222") "hypoblast") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "ISBN:0073040584"^^xsd:string) Annotation( "VHOG:0001222") "endomesoderm") AnnotationAssertion(Annotation( "ISBN:0073040584"^^xsd:string) "future endoderm and mesoderm") AnnotationAssertion(Annotation( ) Annotation( ) "hypoblastus") AnnotationAssertion(Annotation( "ZFIN:ZDB-PUB-961014-576"^^xsd:string) "mesendoderm") AnnotationAssertion( "UBERON:0000089") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "hypoblast (generic)") AnnotationAssertion(rdfs:seeAlso "https://github.com/obophenotype/uberon/issues/437"^^xsd:anyURI) AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/e/e3/Gray21.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (blastocele) AnnotationAssertion(Annotation( ) "Fluid-filled central region of a blastocyst.") AnnotationAssertion(Annotation( ) ) AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0010433") Annotation( "AAO"^^xsd:string) Annotation( "ISBN:0-02-377110-0") Annotation( "ISBN:0815318960") "A blastocoel forms during embryogenesis when a zygote (a fertilized ovum) divides into many cells through mitosis. The blastocoel is the cavity of the blastula, a closed space which is invaded by early mesenchyme and later obliterated by the enlarging archenteron.[AAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000811") Annotation( "VHOG"^^xsd:string) Annotation( ) "The cavity inside the blastula. [The_evolution_of_organ_systems_(2007)_Oxford:_Oxford_University_Press, p.150, see_Schmidt-Rhaesa_A][VHOG]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000811") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0198566694 Schmidt-Rhaesa A, The evolution of organ systems (2007) p.150") "In the development of many animals, a hollow blastula stage is formed during early embryogenesis. Such a hollow blastula is even regarded as an autapomorphy of Metazoa and is present already in some sponges.[well established][VHOG]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010433") AnnotationAssertion( "EHDAA2:0000175") AnnotationAssertion( "EHDAA:50") AnnotationAssertion( "EMAPA:16044") AnnotationAssertion( "FMA:293131") AnnotationAssertion( "VHOG:0000811") AnnotationAssertion( "XAO:0000294") AnnotationAssertion( "blastocoele") AnnotationAssertion(Annotation( "EHDAA2:0000175") "blastocoelic cavity") AnnotationAssertion( "blastocyst cavity") AnnotationAssertion( "cleavage cavity") AnnotationAssertion( "segmentation cavity") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "EMAPA:16044") "blastocelic cavity") AnnotationAssertion(Annotation( "VHOG:0000811") "blastocoel") AnnotationAssertion( "UBERON:0000090") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "blastocele") AnnotationAssertion(rdfs:seeAlso "https://github.com/obophenotype/uberon/issues/475"^^xsd:anyURI) AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/c/c3/Blastocyst.gif"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (bilaminar disc) AnnotationAssertion(Annotation( "MP:0003886") "A flattened, almost circular bilaminar plate of cells formed when the inner cell mass (aka embryoblast) forms two epithelial layers, each of a distinct lineage, separated by an extracellular basement membrane: the external (dorsal) layer is called the epiblast and the internal (ventral) layer is called the hypoblast (aka primitive endoderm); together, they compose the bilaminar embryonic disc.") AnnotationAssertion(Annotation( "MP:0003886") "embryonic disc") AnnotationAssertion(Annotation( "MP:0003886") "embryonic shield") AnnotationAssertion(Annotation( "MP:0003886") "germinal disc") AnnotationAssertion(Annotation( "MP:0003886") "germinal disk") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:293863") AnnotationAssertion( "NCIT:C34112") AnnotationAssertion(Annotation( "ncithesaurus:Bilaminar_Embryonic_Disc") "UMLS:C1283997") AnnotationAssertion( "bilaminary embryonic disc") AnnotationAssertion(Annotation( "ISBN:9780878932504") "bilaminary germ disc") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "bilaminar disk") AnnotationAssertion( "UBERON:0000091") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "bilaminar disc") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/e/e3/Gray21.png"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "Wikipedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (post-embryonic stage) AnnotationAssertion(Annotation( ) "Stage succeeding embryo, including mature structure.") AnnotationAssertion( "In birds, the postnatal stage begins when the beak penetrates the shell (i.e., external pipping) (Brown et al. 1997)") AnnotationAssertion( "BilaDO:0000003") AnnotationAssertion( "OGES:000010") AnnotationAssertion( "OGES:000014") AnnotationAssertion( "OGES:000024") AnnotationAssertion( "WBls:0000022") AnnotationAssertion( "WBls:0000093") AnnotationAssertion( "WBls:0000103") AnnotationAssertion( "postembryonic stage") AnnotationAssertion( "post-hatching stage") AnnotationAssertion( "uberon") AnnotationAssertion( "postembryonic") AnnotationAssertion( "UBERON:0000092") AnnotationAssertion(rdfs:label "post-embryonic stage") AnnotationAssertion(rdfs:seeAlso "https://github.com/obophenotype/uberon/issues/344"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (sulcus) AnnotationAssertion(Annotation( ) "A depression or fissure in the surface of an organ.") AnnotationAssertion( "cjm") AnnotationAssertion( "2009-04-09T06:23:22Z") AnnotationAssertion( ) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0000093") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "sulcus") SubClassOf( ) # Class: (membrane organ) AnnotationAssertion(Annotation( "FMA:7145") "Nonparenchymatous organ that primarily consists of dense connective tissue organized into a sheet which interconnects two or more organs, separates two or more body spaces from one another, or surrounds an organ or body part. Examples: interosseous membrane of forearm, obturator membrane, tympanic membrane, fibrous pericardium, fascia lata, dura mater. [FMA].") AnnotationAssertion( "cjm") AnnotationAssertion( "2009-07-30T05:19:13Z") AnnotationAssertion( "membrane") AnnotationAssertion( "FMA:7145") AnnotationAssertion( "membrane of organ") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0000094") AnnotationAssertion(rdfs:label "membrane organ") SubClassOf( ) SubClassOf(Annotation( "FMA-def") ObjectSomeValuesFrom( )) # Class: (cardiac neural crest) AnnotationAssertion(Annotation( ) "Portion of neural crest that develops from the dorsal neural tube. It overlaps the vagal neural crest and migrates to populate the pharyngeal arches 3, 4 and 6 (producing structures in the head) and to the heart, forming connective tissue that separates the great vessels of the heart. [Wikipedia].") AnnotationAssertion(Annotation( ) "A subpopulation of the cephalic neural crest that emerges from the otic level to the anterior limit of somite 4. It migrates to the heart and is essential for the septation of the outflow track[DOI:10.1242/dev.091751].") AnnotationAssertion(Annotation( "ZFA"^^xsd:string) "ZFA treats this as a subtype of NC.") AnnotationAssertion( "cjm") AnnotationAssertion( "2009-07-30T07:57:38Z") AnnotationAssertion( ) AnnotationAssertion( "TAO:0002173") AnnotationAssertion( "XAO:0004190") AnnotationAssertion( "ZFA:0001648") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "cardiac neural crest complex") AnnotationAssertion(Annotation( ) "complexus cristae neuralis cardiacus") AnnotationAssertion( "UBERON:0000095") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "cardiac neural crest") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "Wikipedia"^^xsd:string) ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) # Class: (blastopore) AnnotationAssertion(Annotation( ) Annotation( ) Annotation( "BGEE:ANN") "The orifice of invagination of the endomesodermal cells during the embryonic stages of an organism.") AnnotationAssertion(Annotation( ) ) AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0000045") Annotation( "AAO"^^xsd:string) Annotation( "AAO:BJB"^^xsd:string) "A slit-like invagination on the dorsal side of the blastula surface of the embryo where the mesoderm and endoderm move inside the embryo at gatrulation.[AAO]") AnnotationAssertion( "In protostome development, the first opening in development, the blastopore, becomes the animal's mouth; In deuterostome development, the blastopore becomes the animal's anus") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0000045") AnnotationAssertion( "BTO:0001695") AnnotationAssertion( "XAO:0000208") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0000100") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "blastopore") AnnotationAssertion(rdfs:seeAlso "https://github.com/obophenotype/uberon/issues/660"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "BGEE:ANN") ObjectSomeValuesFrom( )) # Class: (lobe of lung) AnnotationAssertion(Annotation( "GOC:GO") "A lung lobe is one of the rounded projections that compose the lung[GO].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:36281") AnnotationAssertion( "FMA:7311") AnnotationAssertion( "MA:0003098") AnnotationAssertion( "NCIT:C34021") AnnotationAssertion( "OpenCyc:Mx4rvo6-vpwpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Lung_Lobe") "UMLS:C0225752") AnnotationAssertion( "galen:LobeOfLung") AnnotationAssertion( "lung lobe") AnnotationAssertion( "pulminory lobe") AnnotationAssertion(Annotation( "FMA:7311") "pulmonary lobe") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0000101") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "lobe of lung") SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lung vasculature) AnnotationAssertion(Annotation( "GOC:GO") "The lung vasculature is composed of the tubule structures that carry blood or lymph in the lungs[GO].") AnnotationAssertion( "FMA:73750") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "lung vascular network") AnnotationAssertion(Annotation( "FMA:73750") "pulmonary vasculature") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "vascular network of lung") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "vasculature of lung") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0000102") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "lung vasculature") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete life cycle stage boundary) AnnotationAssertion(Annotation( ) "Instant starting or ending a life cycle stage. These can be arbitrary/fiat.") AnnotationAssertion( "span:ProcessBoundary") AnnotationAssertion( "life cycle stage transition event") AnnotationAssertion( "life cycle stage transition instant") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0000103") AnnotationAssertion(rdfs:label "obsolete life cycle stage boundary") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (life cycle) AnnotationAssertion(Annotation( ) "An entire span of an organism's life, commencing with the zygote stage and ending in the death of the organism.") AnnotationAssertion( "FBdv:00000000") AnnotationAssertion( "HsapDv:0000001") AnnotationAssertion( "MmusDv:0000001") AnnotationAssertion( "OGES:000011") AnnotationAssertion( "ncithesaurus:Life") AnnotationAssertion( "entire life cycle") AnnotationAssertion( "entire lifespan") AnnotationAssertion( "life") AnnotationAssertion( "lifespan") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0000104") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "life cycle") AnnotationAssertion(rdfs:seeAlso "https://github.com/obophenotype/uberon/issues/532"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (life cycle stage) AnnotationAssertion(Annotation( ) "A spatiotemporal region encompassing some part of the life cycle of an organism.") AnnotationAssertion( "this class represents a proper part of the life cycle of an organism. The class 'life cycle' should not be placed here") AnnotationAssertion( "the WBls class 'all stages' belongs here as it is the superclass of other WBls stages") AnnotationAssertion( "we map the ZFS unknown stage here as it is logically equivalent to saying *some* life cycle stage") AnnotationAssertion( "BILS:0000105") AnnotationAssertion( "EFO:0000399") AnnotationAssertion( "FBdv:00007012") AnnotationAssertion( "FMA:24120") AnnotationAssertion( "HsapDv:0000000") AnnotationAssertion( "MmusDv:0000000") AnnotationAssertion( "OlatDv:0000010") AnnotationAssertion( "PdumDv:0000090") AnnotationAssertion( "WBls:0000002") AnnotationAssertion( "XAO:1000000") AnnotationAssertion( "ZFS:0000000") AnnotationAssertion( "ZFS:0100000") AnnotationAssertion( "ncithesaurus:Developmental_Stage") AnnotationAssertion( "developmental stage") AnnotationAssertion( "stage") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0000105") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "life cycle stage") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (zygote stage) AnnotationAssertion(Annotation( ) "A stage at which the organism is a single cell produced by means of sexual reproduction.") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000745") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0030259821 Ruppert EE, Fox RS, Barnes RD, Invertebrate zoology: a functional evolutionary approach (2003) p.107") "As in all metazoans, eumetazoan development begins with a fertilized egg, or zygote.[well established][VHOG]") AnnotationAssertion( ) AnnotationAssertion( "BILS:0000106") AnnotationAssertion( "BilaDO:0000005") AnnotationAssertion( "EFO:0001322") AnnotationAssertion( "EHDAA:27") AnnotationAssertion( "FBdv:00005288") AnnotationAssertion( "NCIT:C12601") AnnotationAssertion( "PdumDv:0000100") AnnotationAssertion( "VHOG:0000745") AnnotationAssertion( "XAO:1000001") AnnotationAssertion( "ZFS:0000001") AnnotationAssertion( "1-cell stage") AnnotationAssertion(Annotation( "BTO:0000854") "fertilized egg stage") AnnotationAssertion( "one cell stage") AnnotationAssertion( "uberon") AnnotationAssertion( "fertilized egg stage") AnnotationAssertion(Annotation( "VHOG:0000745") "one-cell stage") AnnotationAssertion(Annotation( "VHOG:0000745") "zygote") AnnotationAssertion(Annotation( ) Annotation( ) "zygotum") AnnotationAssertion( "UBERON:0000106") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "zygote stage") AnnotationAssertion(rdfs:seeAlso ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (cleavage stage) AnnotationAssertion(Annotation( ) Annotation( "GO:0040016") "The first few specialized divisions of an activated animal egg; Stage consisting of division of cells in the early embryo. The zygotes of many species undergo rapid cell cycles with no significant growth, producing a cluster of cells the same size as the original zygote. The different cells derived from cleavage are called blastomeres and form a compact mass called the morula. Cleavage ends with the formation of the blastula.") AnnotationAssertion( ) AnnotationAssertion( "BILS:0000107") AnnotationAssertion( "BilaDO:0000006") AnnotationAssertion( "EFO:0001290") AnnotationAssertion( "FBdv:00000054") AnnotationAssertion( "MESH:A16.254.270") AnnotationAssertion( "MmusDv:0000004") AnnotationAssertion( "OGES:000015") AnnotationAssertion( "OGES:000020") AnnotationAssertion( "PdumDv:0000200") AnnotationAssertion( "XAO:1000004") AnnotationAssertion( "ZFS:0000046") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0000107") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "cleavage stage") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (blastula stage) AnnotationAssertion(Annotation( ) "An early stage of embryonic development in animals. It is produced by cleavage of a fertilized ovum and consists of a spherical layer of around 128 cells surrounding a central fluid-filled cavity called the blastocoel. The blastula follows the morula and precedes the gastrula in the developmental sequence.") AnnotationAssertion( "consider adding a preceding stage 'morula stage' as part of cleavage") AnnotationAssertion( ) AnnotationAssertion( "BILS:0000108") AnnotationAssertion( "BilaDO:0000007") AnnotationAssertion( "EFO:0001282") AnnotationAssertion( "HsapDv:0000006") AnnotationAssertion( "MmusDv:0000007") AnnotationAssertion( "OGES:000003") AnnotationAssertion( "OGES:000016") AnnotationAssertion( "OGES:000021") AnnotationAssertion( "OpenCyc:Mx4rEetFnKP2EdqAAAACs4vPlg") AnnotationAssertion( "WBls:0000005") AnnotationAssertion( "XAO:1000003") AnnotationAssertion( "ZFS:0000045") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0000108") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "blastula stage") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/c/c6/Blastulation.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (gastrula stage) AnnotationAssertion(Annotation( "GO:0007369") "A stage defined by complex and coordinated series of cellular movements that occurs at the end of cleavage during embryonic development of most animals. The details of gastrulation vary from species to species, but usually result in the formation of the three primary germ layers, ectoderm, mesoderm and endoderm.") AnnotationAssertion( "BILS:0000109") AnnotationAssertion( "BilaDO:0000008") AnnotationAssertion( "EFO:0001296") AnnotationAssertion( "FBdv:00005317") AnnotationAssertion( "HsapDv:0000010") AnnotationAssertion( "MmusDv:0000013") AnnotationAssertion( "OGES:000004") AnnotationAssertion( "OGES:000019") AnnotationAssertion( "WBls:0000010") AnnotationAssertion( "XAO:1000005") AnnotationAssertion( "ZFS:0000047") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "blastocystis trilaminaris stage") AnnotationAssertion(Annotation( ) "trilaminar blastocyst stage") AnnotationAssertion(Annotation( ) "trilaminar blastoderm stage") AnnotationAssertion(Annotation( ) "trilaminar disk stage") AnnotationAssertion(Annotation( ) "trilaminar germ stage") AnnotationAssertion(Annotation( ) "trilaminar stage") AnnotationAssertion( "UBERON:0000109") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "gastrula stage") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "BILS") ObjectSomeValuesFrom( )) # Class: (neurula stage) AnnotationAssertion(Annotation( "GO:0001841") "Staged defined by the formation of a tube from the flat layer of ectodermal cells known as the neural plate. This will give rise to the central nervous system.") AnnotationAssertion( "BILS:0000110") AnnotationAssertion( "BilaDO:0000009") AnnotationAssertion( "HsapDv:0000012") AnnotationAssertion( "MmusDv:0000017") AnnotationAssertion( "XAO:1000006") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0000110") AnnotationAssertion(rdfs:label "neurula stage") AnnotationAssertion(rdfs:seeAlso "https://github.com/obophenotype/uberon/issues/343"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (organogenesis stage) AnnotationAssertion(Annotation( ) "A stage at which the ectoderm, endoderm, and mesoderm develop into the internal organs of the organism.") AnnotationAssertion( ) AnnotationAssertion( "BILS:0000111") AnnotationAssertion( "BilaDO:0000010") AnnotationAssertion( "HsapDv:0000015") AnnotationAssertion( "MmusDv:0000018") AnnotationAssertion( "OGES:000005") AnnotationAssertion( "OGES:000032") AnnotationAssertion( "uberon") AnnotationAssertion( "segmentation stage") AnnotationAssertion( "UBERON:0000111") AnnotationAssertion(rdfs:label "organogenesis stage") AnnotationAssertion(rdfs:seeAlso "https://github.com/obophenotype/uberon/issues/533"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (sexually immature stage) AnnotationAssertion(Annotation( "XAO:1000010") "The stage of being a sexually immature adult animal[XAO:1000010].") AnnotationAssertion( "In mammals this would include infant (nourishment from lactation) and juvenile (prepubertal no longer dependent on mother)") AnnotationAssertion( "BILS:0000112") AnnotationAssertion( "BTO:0002168") AnnotationAssertion( "EFO:0001300") AnnotationAssertion( "EV:0300051") AnnotationAssertion( "MmusDv:0000043") AnnotationAssertion( "OGES:000009") AnnotationAssertion( "XAO:1000010") AnnotationAssertion( "XtroDO:0000083") AnnotationAssertion( "ZFS:0000051") AnnotationAssertion(Annotation( "VHOG:FB") "immature stage") AnnotationAssertion(Annotation( "XAO:1000010") "juvenile stage") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "subadult stage") AnnotationAssertion( "UBERON:0000112") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "sexually immature stage") AnnotationAssertion(rdfs:seeAlso "https://github.com/obophenotype/uberon/issues/427"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (post-juvenile adult stage) AnnotationAssertion(Annotation( ) "The stage of being a sexually mature adult animal.") AnnotationAssertion( "adult stage") AnnotationAssertion( "BILS:0000113") AnnotationAssertion( "EV:0300064") AnnotationAssertion( "EV:0300070") AnnotationAssertion( "MIAA:0000403") AnnotationAssertion( "MmusDv:0000110") AnnotationAssertion( "OGES:000026") AnnotationAssertion( "OGES:000027") AnnotationAssertion( "XAO:1000093") AnnotationAssertion( "ZFS:0000044") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0000113") AnnotationAssertion(rdfs:label "post-juvenile adult stage") AnnotationAssertion(rdfs:seeAlso "https://github.com/obophenotype/uberon/issues/345"^^xsd:anyURI) AnnotationAssertion(rdfs:seeAlso "https://github.com/obophenotype/uberon/issues/499"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lung connective tissue) AnnotationAssertion(Annotation( ) Annotation( "ISBN:0-683-40008-8"^^xsd:string) Annotation( "MGI:anna"^^xsd:string) Annotation( "MP:0002276") "The connective tissue located between the respiratory (airway and alveolar) epithelium, the capillary endothelium and pleural mesothelium; it contains basement membrane composed of collagen, elastin, proteoglycans, and fibronectin.") AnnotationAssertion( "it functions in the mechanical behavior of the lung, and forms a barrier to regulate the flow of plasma constituents from the capillaries to the airway and alveolar spaces") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:35521") AnnotationAssertion( "FMA:27533") AnnotationAssertion( "MA:0001782") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "connective tissue of lung") AnnotationAssertion(Annotation( "FMA:27533") "pulmonary interstitium") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "MA:0001782") "lung interstitial tissue") AnnotationAssertion( "lung interstitium") AnnotationAssertion(Annotation( "EMAPA:35521") "pulmonary connective tissue") AnnotationAssertion( "pulmonary interstitial tissue") AnnotationAssertion( "UBERON:0000114") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "lung connective tissue") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lung epithelium) AnnotationAssertion(Annotation( "MP:0006382") "The epithelial layer of the lung.") AnnotationAssertion( "A pseudostratified epithelium, containing basal cells, stem cells of the airway, submucosal glands and cartilage rings, is limited to the trachea and large lobar airways in the mouse (Morrisey and Hogan, 2010). This more complex epithelium extends to terminal bronchioles in the human[DOI:10.1242/dev.115469]") AnnotationAssertion( "BTO:0001653") AnnotationAssertion( "EMAPA:32860") AnnotationAssertion( "MA:0001783") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelial tissue of lung") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelium of lung") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "lung epithelial tissue") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0001653") "pulmonary epithelium") AnnotationAssertion( "UBERON:0000115") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "lung epithelium") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lung saccule) AnnotationAssertion(Annotation( "GO:0060430") "Primitive gas exchange portion of the lung composed of type I and type II cells[GO].") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0000116") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "lung saccule") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "GO"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (respiratory tube) AnnotationAssertion(Annotation( ) Annotation( "GO:0030323") "A tube in the respiratory system. Examples: bronchus, bronchiole, trachea.") AnnotationAssertion(Annotation( "GO") "in GO lung development is part of respiratory tube development. This can lead to inconsistencies with other ontologies, e.g. VT. The GO structure may be better represented by a tree of tubes (see the FMA class)") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37946") AnnotationAssertion( "FMA:12224") AnnotationAssertion(Annotation( "FMA:12224") "segment of tracheobronchial tree") AnnotationAssertion(Annotation( "MP:0004391") "respiratory conducting tube") AnnotationAssertion(Annotation( "FMA:12224") "segment of tracheobronchial tree") AnnotationAssertion(Annotation( "FMA:12224") "tracheobronchial tree segment") AnnotationAssertion( "uberon") AnnotationAssertion( "airway") AnnotationAssertion( "UBERON:0000117") AnnotationAssertion(rdfs:label "respiratory tube") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lung bud) AnnotationAssertion(Annotation( ) Annotation( "GO:0060431") "Structure derived from foregut that becomes a lung[GO].") AnnotationAssertion( "clarify successors - include bronchi?") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0001643") AnnotationAssertion( "EHDAA2:0004089") AnnotationAssertion( "NCIT:C34260") AnnotationAssertion( "NCIT:C34282") AnnotationAssertion(Annotation( "ncithesaurus:Primary_Bronchial_Bud") "UMLS:C1514420") AnnotationAssertion(Annotation( "ncithesaurus:Respiratory_Diverticulum") "UMLS:C1514897") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "gemma pulmonalis") AnnotationAssertion(Annotation( ) Annotation( ) "gemma respiratoria") AnnotationAssertion(Annotation( ) "lung bud") AnnotationAssertion(Annotation( "GO:0060572") "primary lung bud") AnnotationAssertion(Annotation( ) "respiratory diverticulum") AnnotationAssertion( "UBERON:0000118") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "lung bud") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/7/71/Gray948.png"^^xsd:anyURI) SubClassOf(Annotation( "GO:0060441") ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (cell layer) AnnotationAssertion(Annotation( ) "Portion of tissue, that consists of single layer of cells connected to each other by cell junctions. Examples: layer of glial cells; epithelium.") AnnotationAssertion( "consider adding to caro") AnnotationAssertion(Annotation( "NCIT:C66831") "layer") AnnotationAssertion( "NCIT:C66831") AnnotationAssertion( "layer of cells") AnnotationAssertion( "uberon") AnnotationAssertion( "cell sheath") AnnotationAssertion( "sheath of cells") AnnotationAssertion( "UBERON:0000119") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "cell layer") SubClassOf( ) # Class: (blood brain barrier) AnnotationAssertion(Annotation( ) Annotation( ) "Cell layer consisting of lining cells that separates the central nervous system and the bloodstream. The BBB may consist of endothelial cells or glial cells. An endothelial barrier may have arisen independently several times during evolution. In bichir and lungfish the barrier is formed by brain endothelial cells, while in sturgeon it is formed by a complex perivascular glial sheath, but with no detectable tight junctions.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "NCIT:C13194") AnnotationAssertion(Annotation( "ncithesaurus:Blood-Brain_Barrier") "UMLS:C0005854") AnnotationAssertion( "blood-brain barrier") AnnotationAssertion( "uberon") AnnotationAssertion( "BBB") AnnotationAssertion( "UBERON:0000120") AnnotationAssertion(rdfs:label "blood brain barrier") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (perineurium) AnnotationAssertion(Annotation( "NLXANAT:090205") "A layer of thin, concentrically arranged cells with interspersed collagen that lies within the epineurium. (Nolte, J., The Human Brain 3rd edition).") AnnotationAssertion(Annotation( ) "Connective tissue surrounding a fascicle[Wikipedia:Perineurium].") AnnotationAssertion( "perineurial") AnnotationAssertion(Annotation( "FBbt") "consider FBbt:00007090 (perineurium): The outer two layers of glial cells that cover the central nervous system and the nerves. The outer layer is the perineurial sheath (sometimes referred to as the perineurial sheath outer layer); the inner layer is the sub-perineural glial sheath (sometimes referred to as the perineurial sheath inner layer)") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0003153") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37849") AnnotationAssertion( "FMA:52585") AnnotationAssertion( "NCIT:C33302") AnnotationAssertion( "NCIT:C41407") AnnotationAssertion( "NLXANAT:090205") AnnotationAssertion(Annotation( "ncithesaurus:Perineurium") "UMLS:C0205890") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0000121") AnnotationAssertion(rdfs:label "perineurium") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/9/9c/Gray636.png"^^xsd:anyURI) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (neuron projection bundle) AnnotationAssertion(Annotation( "CARO:0001001") Annotation( "FBC:DOS") Annotation( "FBbt:00005099") "A fasciculated bundle of neuron projections (GO:0043005), largely or completely lacking synapses.") AnnotationAssertion( "UBERON:0005163") AnnotationAssertion( "CARO:0001001") AnnotationAssertion( "FBbt:00005099") AnnotationAssertion( "NLX:147821") AnnotationAssertion( "funiculus") AnnotationAssertion(Annotation( "FBbt:00005099") "nerve fiber bundle") AnnotationAssertion( "neural fiber bundle") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0000122") AnnotationAssertion(rdfs:label "neuron projection bundle") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (endoneurium) AnnotationAssertion(Annotation( "NLXANAT:090202") "The loose connective tissue within the perineurium that continues into nerve fascicles and surrounds individual fibers. (Nolte, J. The Human Brain 3rd edition).") AnnotationAssertion(Annotation( ) "a layer of delicate connective tissue that encloses the myelin sheath of a nerve fiber within a funiculus[Wikipedia:Endodeurium].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37847") AnnotationAssertion( "FMA:52586") AnnotationAssertion( "NCIT:C32518") AnnotationAssertion( "NLXANAT:090202") AnnotationAssertion(Annotation( "ncithesaurus:Endoneurium") "UMLS:C0205888") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0000123") AnnotationAssertion(rdfs:label "endoneurium") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (epineurium) AnnotationAssertion(Annotation( "NLXANAT:090203") "A loose connective tissue sheath surrounding each peripheral nerve. Composed mainly of colagen and fibroblasts, it forms a substantial covering over nerve trunks, then thins to an incomplete layer around smaller branches near their terminations. The epineurium is continuous centrally with the dura. Peripherally, it usually ends near the termination of a nerve fiber, but it may continue as the capsule of Meissner corpuscles and a few other encapsulated endings. Nolte, J. The Human Brain 3rd edition.") AnnotationAssertion(Annotation( ) "outermost layer of connective tissue surrounding a peripheral nerve. It includes the blood vessels supplying the nerve. It consists of adipose tissue and fibrocollagenous tissues[Wikipedia:Epineurium].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0003154") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37848") AnnotationAssertion( "FMA:12234") AnnotationAssertion( "NCIT:C32528") AnnotationAssertion( "NLXANAT:090203") AnnotationAssertion(Annotation( "ncithesaurus:Epineurium") "UMLS:C0205889") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0000124") AnnotationAssertion(rdfs:label "epineurium") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/9/9c/Gray636.png"^^xsd:anyURI) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (neural nucleus) AnnotationAssertion(Annotation( "NLX:28443") "A spatially aggregated collection of nerve cell bodies in the CNS, consisting of one or more subpopulations that share cell type, chemical phenotype, and connections, and including nearby cells that share the same cell type, chemical phenotype, and connections. (CUMBO).") AnnotationAssertion(Annotation( "GO_REF:0000021") "Anatomical structure consisting of a discrete aggregate of neuronal soma[GO][GO_REF:0000021].") AnnotationAssertion( "Proposed CUMBO def from MM: A subcortical part of the nervous system consisting of a relatively compact group of cells that is distinguishable histologically that share a commonality of cytoarchitecture, chemoarchitecturel and connectivity. (comments: I put in 'subcortical' because I don't think we consider either the cerebellar cortex or cerebral cortex to be nuclei. Some people distinguish between a nucleus and a laminar structure (see Wikipedia definition). However, there are structures identified as nuclei that are laminar, e.g., lateral geniculate nucleus, although they are not laminated in all species. Also, I put in 'relatively compact' and 'distiguishable by histology' because we have groups of cells, e.g., cholinergic cell groups, doparminergic cell groups that are related on the 3 criteria but which we don't tend to consider nuclei because they don't occupy an easily defined territory. But all is open to debate.") AnnotationAssertion( "nucleus") AnnotationAssertion( ) AnnotationAssertion( "AEO:0000136") AnnotationAssertion( "FMA:83686") AnnotationAssertion( "NCIT:C13197") AnnotationAssertion( "NLX:28443") AnnotationAssertion( "nervous system nucleus") AnnotationAssertion(Annotation( "FMA:83686") "neuraxis nucleus") AnnotationAssertion(Annotation( "AEO:0000136") "neuronal nucleus") AnnotationAssertion(Annotation( "NLX:28443") "nucleus of CNS") AnnotationAssertion( "uberon") AnnotationAssertion( "nucleus of neuraxis") AnnotationAssertion( "UBERON:0000125") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "neural nucleus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (cranial nerve nucleus) AnnotationAssertion(Annotation( "NLX:28532") "Nucleus that receives projections from or contains neurons that send projections through one of the cranial nerves.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37066") AnnotationAssertion( "FMA:54501") AnnotationAssertion( "NLX:28532") AnnotationAssertion(Annotation( "FMA:54501") "cranial neural nucleus") AnnotationAssertion( "nucleus of cranial nerve") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "nucleus nervi cranialis") AnnotationAssertion( "UBERON:0000126") AnnotationAssertion(rdfs:label "cranial nerve nucleus") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/3/30/Gray696.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (facial nucleus) AnnotationAssertion(Annotation( "ISBN:0838580343") Annotation( "MP:0000909") "The group of motor neurons residing in the pons that innervate the muscles of facial expression.") AnnotationAssertion(Annotation( "FMA"^^xsd:string) "FMA has 3 subclasses - left, right and motor nucleus of facial nerve, but no defs. It's not clear how facial nucleus is distinct from facial motor nucleus.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:7") AnnotationAssertion( "BAMS:7N") AnnotationAssertion( "BAMS:VII") AnnotationAssertion( "BM:Pons-VII") AnnotationAssertion( "DHBA:12420") AnnotationAssertion( "EHDAA2:0004638") AnnotationAssertion( "EMAPA:35338") AnnotationAssertion( "EV:0100267") AnnotationAssertion( "FMA:54572") AnnotationAssertion( "MA:0001014") AnnotationAssertion( "NCIT:C12898") AnnotationAssertion(Annotation( "ncithesaurus:Facial_Nerve_Nucleus") "UMLS:C0228740") AnnotationAssertion( "VHOG:0001412") AnnotationAssertion(Annotation( "MA:0001014") "facial VII nucleus") AnnotationAssertion( "facial nerve nucleus") AnnotationAssertion(Annotation( "FMA:54572") "nucleus of facial nerve") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "MA:0001014") "facial VII motor nucleus") AnnotationAssertion( "UBERON:0000127") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "facial nucleus") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "definitional"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (olivary body) AnnotationAssertion(Annotation( ) "Prominent oval structure in the medulla oblongata, present in pairs, the lower portion of the brainstem. They contain the olivary nuclei.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0002299") AnnotationAssertion( "olive body") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "oliva") AnnotationAssertion(Annotation( "BTO:0002299") "olivary nucleus") AnnotationAssertion( "olive") AnnotationAssertion( "UBERON:0000128") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "olivary body") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/9/9a/Gray679.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (transverse foramen) AnnotationAssertion(Annotation( ) "Foramen that pierces the transverse processes of the seven cervical vertebrae. In the upper six vertebrae, the foramen gives passage to the vertebral artery, vertebral vein, and a plexus of sympathetic nerves. The seventh foramen lacks the artery, but contains the vein and sympathetic nerves.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:36272") AnnotationAssertion( "FMA:23997") AnnotationAssertion(Annotation( ) "foramen transversarium") AnnotationAssertion(Annotation( "FMA:23998") "foramen transversarium of cervical vertebra") AnnotationAssertion(Annotation( "FMA:23997") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "foramen transversarium vertebrae cervicales") AnnotationAssertion(Annotation( "FMA:23997") "transverse foramen of cervical vertebra") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "foramen transversarium") AnnotationAssertion( "UBERON:0000130") AnnotationAssertion(rdfs:label "transverse foramen") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/3/3c/Gray84.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (trochlea of humerus) AnnotationAssertion(Annotation( ) "The medial portion of the articular surface of the humerus is named the trochlea, and presents a deep depression between two well-marked borders; it is convex from before backward, concave from side to side, and occupies the anterior, lower, and posterior parts of the extremity. It is directly inferior to the most prominent anterior humeral fossia, the Coronoid fossia. It articulates with the ulna.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:23370") AnnotationAssertion(Annotation( "FMA:23370") "humeral trochlea") AnnotationAssertion(Annotation( ) "trochlea humeri") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0000144") AnnotationAssertion(rdfs:label "trochlea of humerus") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/4/4b/Trochleahumeri.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (anterior region of body) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0000153") AnnotationAssertion(rdfs:label "anterior region of body") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses(Annotation( "lexical"^^xsd:string) ) # Class: (posterior region of body) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0000154") AnnotationAssertion(rdfs:label "posterior region of body") SubClassOf( ) # Class: (theca cell layer) AnnotationAssertion(Annotation( ) "A layer of the ovarian follicle that consists of theca cells.") AnnotationAssertion( "The theca folliculi are responsible for the production of testosterone from androstenedione in females, and indirectly the production of estrogens by supplying the neighboring granulosa cells with androstenedione that can then be used as a substrate for aromatase. [Wikipedia:Theca_of_follicle]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0002853") AnnotationAssertion( "EFO:0003629") AnnotationAssertion( "EMAPA:35636") AnnotationAssertion( "FMA:18656") AnnotationAssertion( "MA:0001712") AnnotationAssertion( "TAO:0001113") AnnotationAssertion( "ZFA:0001113") AnnotationAssertion( "layer of theca cells") AnnotationAssertion(Annotation( "MA:0001712") "ovary theca") AnnotationAssertion( "theca cell layer of ovarian follicle") AnnotationAssertion( "theca of follicle") AnnotationAssertion(Annotation( "ZFA:0001113") "thecal cell layer") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "EMAPA:35636") "ovarian theca") AnnotationAssertion(Annotation( ) Annotation( ) "theca folliculi") AnnotationAssertion(Annotation( ) "theca folliculi") AnnotationAssertion(Annotation( "ZFA:0001113") Annotation( ) "thecal cell layers") AnnotationAssertion( "UBERON:0000155") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "theca cell layer") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (theca externa) AnnotationAssertion(Annotation( ) "The theca externa is the outer layers of the theca folliculi. It contains abundant collagen and is mainly supportive.") AnnotationAssertion( "UBERON:0005182") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0002852") AnnotationAssertion( "FMA:18657") AnnotationAssertion( "MA:0001713") AnnotationAssertion(Annotation( "MA:0001713") "ovary theca externa") AnnotationAssertion(Annotation( "FMA:18657") "theca externa (folliculus ovaricus tertiarius)") AnnotationAssertion(Annotation( "FMA:18657") "tunica externa of theca folliculi") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0002852") "external coat of theca folliculi") AnnotationAssertion(Annotation( ) Annotation( ) "tunica externa thecae folliculi") AnnotationAssertion(Annotation( "BTO:0002852") "tunica externa thecae folliculi") AnnotationAssertion( "UBERON:0000156") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "theca externa") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/5/50/Mature_Graffian_follicle.jpg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (theca interna) AnnotationAssertion(Annotation( ) "Theca interna cells express receptors for luteinizing hormone, which when activated will stimulate the production of androstenedione from cholesterol by the enzyme desmolase. Androstenedione ultimately gives the granulosa cells the precursor substrate for estrogen manufacturing.") AnnotationAssertion( "UBERON:0005183") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0002851") AnnotationAssertion( "FMA:18658") AnnotationAssertion( "MA:0001714") AnnotationAssertion(Annotation( "MA:0001714") "ovary theca interna") AnnotationAssertion(Annotation( "FMA:18658") "theca interna (folliculus ovaricus tertiarius)") AnnotationAssertion(Annotation( "FMA:18658") "tunica interna of theca folliculi") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0002851") "internal coat of capsule of Graafian follicle") AnnotationAssertion(Annotation( "BTO:0002851") "tunica interna thecae folliculi") AnnotationAssertion( "UBERON:0000157") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "theca interna") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (membranous layer) AnnotationAssertion(Annotation( "ncithesaurus:Membrane") "A thin sheet or layer of pliable tissue, serving as a covering or envelope of a part, as the lining of a cavity, as a partition or septum, or to connect two structures.") AnnotationAssertion( "membrane") AnnotationAssertion( "FMA:30322") AnnotationAssertion( "FMA:82500") AnnotationAssertion( "MESH:D008566") AnnotationAssertion( "NCIT:C12749") AnnotationAssertion(Annotation( "FMA:82500") "membranous organ component") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0000158") AnnotationAssertion(rdfs:label "membranous layer") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (anal canal) AnnotationAssertion(Annotation( ) "The terminal part of the large intestine, continuous proximally with the rectum and distally terminates with the anus.") AnnotationAssertion( "requires alignment with EHDAA2 and complete developmental relationships") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0001978") AnnotationAssertion( "CALOHA:TS-2160") AnnotationAssertion( "EMAPA:18256") AnnotationAssertion( "FMA:15703") AnnotationAssertion( "MA:0000330") AnnotationAssertion( "NCIT:C12375") AnnotationAssertion(Annotation( "ncithesaurus:Anal_Canal") "UMLS:C0227411") AnnotationAssertion( "galen:AnalCanal") AnnotationAssertion( "anal canal") AnnotationAssertion( "anal canal viewed anatomically") AnnotationAssertion( "anatomical anal canal") AnnotationAssertion( "uberon") AnnotationAssertion( "anal pad") AnnotationAssertion( "anus") AnnotationAssertion(Annotation( ) Annotation( ) "canalis analis") AnnotationAssertion(Annotation( "BTO:0001978") "canalis analis") AnnotationAssertion( "cloaca") AnnotationAssertion( "cloacal chamber") AnnotationAssertion( "mesenteron") AnnotationAssertion(Annotation( "BTO:0001978") "pars analis recti") AnnotationAssertion( "UBERON:0000159") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "anal canal") AnnotationAssertion( "https://upload.wikimedia.org/wikipedia/commons/0/01/Gray1078.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "Wikipathways:WP2062") ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (intestine) AnnotationAssertion(Annotation( ) Annotation( "GOC:GO") "Segment of the alimentary canal extending from the stomach to the anus and, in humans and other mammals, consists of two segments, the small intestine and the large intestine.") AnnotationAssertion( "This class is probably too inclusive") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0000246") Annotation( "AAO"^^xsd:string) Annotation( "AAO:EJS"^^xsd:string) "Portion of the alimentary canal bounded anteriorly by the pyloric sphincter and posteriorly by the cloacal sphincter.[AAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000056") Annotation( "VHOG"^^xsd:string) Annotation( ) "The tract of the alimentary canal. [Dorian_AF, Elsevier's_encyclopaedic_dictionary_of_medicine, Part_B:_Anatomy_(1988)_Amsterdam_etc.:_Elsevier][VHOG]") AnnotationAssertion( "intestinal") AnnotationAssertion( "In zebrafish, No stomach, small intestine, or large intestine can be distinguished. However, differences can be found in the morphology of the mucosa columnar epithelial cells and the number of goblet cells, suggesting functional differentiation. The intestine has numerous folds that become progressively shorter in a rostral-to-caudal direction. Proportionally, these folds are significantly larger than the finger-like intestinal villi of mammals and other amniotes (Wallace et al. 2005). Columnar-shaped absorptive enterocytes are the most numerous in the zebrafish intestinal epithelium. Goblet cells are the second most populous epithelial cell type.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0000246") AnnotationAssertion( "ANISEED:1235303") AnnotationAssertion( "BSA:0000093") AnnotationAssertion( "BTO:0000648") AnnotationAssertion( "CALOHA:TS-0490") AnnotationAssertion( "EFO:0000834") AnnotationAssertion( "EMAPA:32874") AnnotationAssertion( "EV:0100071") AnnotationAssertion( "FMA:7199") AnnotationAssertion( "GAID:295") AnnotationAssertion( "MA:0000328") AnnotationAssertion( "MA:0001524") AnnotationAssertion( "MESH:A03.492.411") AnnotationAssertion( "MIAA:0000043") AnnotationAssertion( "NCIT:C12736") AnnotationAssertion( "TAO:0001338") AnnotationAssertion(Annotation( "ncithesaurus:Intestine") "UMLS:C0021853") AnnotationAssertion( "VHOG:0000056") AnnotationAssertion( "WBbt:0005772") AnnotationAssertion( "XAO:0000129") AnnotationAssertion( "ZFA:0001338") AnnotationAssertion( "galen:Intestine") AnnotationAssertion( "bowel") AnnotationAssertion( "uberon") AnnotationAssertion( "intestinal tract") AnnotationAssertion( "UBERON:0000160") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "intestine") SubClassOf(Annotation( "cjm"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (orifice) AnnotationAssertion(Annotation( "FMA:3724") "Anatomical conduit that connects two adjacent body spaces (or a body space with the space surrounding the organism)[FMA,modified].") AnnotationAssertion(Annotation( "FMA"^^xsd:string) "in FMA, this is an anatomical conduit *space*, rather than anatomical conduit") AnnotationAssertion(Annotation( "FMA:3724") "anatomical ostium") AnnotationAssertion( "ostium") AnnotationAssertion( ) AnnotationAssertion( "FMA:3724") AnnotationAssertion(Annotation( "FMA:3724") "anatomical orifice") AnnotationAssertion( "hilum") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0000161") AnnotationAssertion(rdfs:label "orifice") SubClassOf( ) # Class: (cloaca) AnnotationAssertion(Annotation( ) Annotation( "ISBN:0073040584"^^xsd:string) "Common chamber into which the intestines and excretory system opens. Arises during development in all vertebrates, but in many it becomes subdivided, lost or incorporated into other structures.") AnnotationAssertion( "adding df link to embryonic cloaca leads to a cycle in uberon-simple, as cloaca is a suberclass of embryonic cloaca") AnnotationAssertion(Annotation( "most adult placentals have no trace of a cloaca. However, the tenrecs and golden moles, small placental mammals native to Africa, retain a cloaca as adults.") ) AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001186") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( ) "A common passage for fecal, urinary, and reproductive discharge in most lower vertebrates as well as the terminal end of the hindgut before division into rectum, bladder, and genital primordia in mammalian embryos. [TFD][VHOG]") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0000095") Annotation( "AAO"^^xsd:string) Annotation( "AAO:BJB"^^xsd:string) "Anatomical structure which is the common receptacle for the alimentary canal, Wolffian ducts, oviducts, and the bladder.[AAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001186") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0072528305 Kardong KV, Vertebrates: Comparative Anatomy, Function, Evolution (2006) p.572") "A cloaca is apparently a primitive vertebrate feature because it occurs in most primitive gnathostomes and persists in the embryos of almost all vertebrates.[well established][VHOG]") AnnotationAssertion( "cloacal") AnnotationAssertion( "Human beings only have an embryonic cloaca, which is split up into separate tracts during the development of the urinary and reproductive organs") AnnotationAssertion(Annotation( "WP"^^xsd:string) "hindgut endoderm and proctodeal ectoderm.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0000095") AnnotationAssertion( "GAID:1206") AnnotationAssertion( "MESH:D002988") AnnotationAssertion( "NCIT:C34127") AnnotationAssertion(Annotation( "ncithesaurus:Cloaca") "UMLS:C0008987") AnnotationAssertion( "VHOG:0001186") AnnotationAssertion( "XAO:0000244") AnnotationAssertion( "ZFA:0005781") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "AAO:0000095") "cloacal chamber") AnnotationAssertion(Annotation( "XAO:0000244") "vent") AnnotationAssertion( "UBERON:0000162") AnnotationAssertion(rdfs:label "cloaca") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "ZFA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "AAO"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (embryonic cloaca) AnnotationAssertion(Annotation( ) Annotation( "MP:0010115") "Endoderm-lined chamber that develops as pouch-like dilation of the caudal end of the hindgut and receives the allantois ventrally and two mesonephric ducts laterally; caudally it ends blindly at the cloacal membrane formed by the union of proctodeal (anal pit) ectoderm and cloacal endoderm, with no intervening mesoderm[MP].") AnnotationAssertion( "this class represents the embryonic form of the cloaca, as found in both mammals and non-mammals.") AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0000256") AnnotationAssertion( "EHDAA:4895") AnnotationAssertion( "EMAPA:27573") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "cloaca") AnnotationAssertion( "UBERON:0000163") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "embryonic cloaca") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (primitive urogenital sinus) AnnotationAssertion(Annotation( "ISBN:0-683-40008-8"^^xsd:string) Annotation( "MP:0010116") "The ventral part of the cloaca remaining after septation of the rectum, which further develops into part of the bladder, part of the prostatic part of the male urethra and the urethra and vestibule in females.") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000414") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( ) "The ventral part of the cloaca after its separation from the rectum, giving rise to the lower part of the bladder in both sexes, to the prostatic portion of the male urethra, and to the urethra and vestibule in the female. [TFD][VHOG]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000414") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0721676678 Romer AS, Vertebrate body (1970)p.388-89 and Figure 300") "In mammals the lowly monotremes still have a cloaca. Higher types have done away with this structure and have a separate anal outlet for the rectum. The monotreme cloaca shows the initiation of this subdivision. The cloaca has such includes only the distal part, roughly comparable to the proctodeum. The more proximal part is divided into (1) a large dorsal passage into which the intestine opens, the coprodeum, and (2) a ventral portion, the urodeum with which the bladder connects. (...) the development of the placental mammals recapitulates in many respects the phylogenetic story. In the sexually indifferent stage of placental mammal there is a cloaca. While the indifferent stage still persists, a septum develops, and extends out to the closing membrane. This divides the cloaca into two chambers: a coprodeum continuous with the gut above, and a urodeum or urogenital sinus below.[well established][VHOG]") AnnotationAssertion(Annotation( "MP"^^xsd:string) "the term 'urogenital sinus' may refer to the primitive urogenital sinus present as a transient developmental structure in most mammals or it may refer to a condition in which an unseptated cloaca persists in animals longer than normal") AnnotationAssertion(Annotation( "MP:0010116") "urogenital sinus") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0004060") AnnotationAssertion( "EHDAA:5029") AnnotationAssertion( "EHDAA:5919") AnnotationAssertion( "EMAPA:17379") AnnotationAssertion( "NCIT:C34322") AnnotationAssertion(Annotation( "ncithesaurus:Urogenital_Sinus") "UMLS:C0231057") AnnotationAssertion( "VHOG:0000414") AnnotationAssertion(Annotation( "MP:0010116") "UGS") AnnotationAssertion(Annotation( ) "fetal UGS") AnnotationAssertion(Annotation( ) "sinus urogenitalis") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0000164") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "primitive urogenital sinus") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/6/6d/Gray1109.png"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "MP-def") ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (mouth) AnnotationAssertion(Annotation( ) Annotation( ) "The proximal portion of the digestive tract, containing the oral cavity and bounded by the oral opening. In vertebrates, this extends to the pharynx and includes gums, lips, tongue and parts of the palate. Typically also includes the teeth, except where these occur elsewhere (e.g. pharyngeal jaws) or protrude from the mouth (tusks).") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0010355") Annotation( "AAO"^^xsd:string) Annotation( "AAO:BJB"^^xsd:string) "Cavity in which food is initially ingested and generally contains teeth, tongue and glands.[AAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000812") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "DOI:10.1038/nature07309 Hejnol A, Martindale MQ, Acoel development indicates the independent evolution of the bilaterian mouth and anus. Nature (2008)") "Molecular and developmental cell lineage data suggest that the acoel mouth opening is homologous to the mouth of protostomes and deuterostomes and that the last common ancestor of the Bilateria (the 'urbilaterian') had only this single digestive opening.[well established][VHOG]") AnnotationAssertion( "oral") AnnotationAssertion( "some AOs place this as developing from the stomodeum but we weaken this to developmental contribution, as the mouth includes non-ectodermal derivatives") AnnotationAssertion(Annotation( "FMA"^^xsd:string) "in FMA, the tongue, palate etc are part of the mouth which is itself a subdivision of the face. ZFA includes a separate class 'oral region' which is part of the mouth, but excludes tongue and lips") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010355") AnnotationAssertion( "BTO:0001090") AnnotationAssertion( "BTO:0004698") AnnotationAssertion( "CALOHA:TS-1315") AnnotationAssertion( "EFO:0000825") AnnotationAssertion( "EHDAA2:0001326") AnnotationAssertion( "EHDAA:542") AnnotationAssertion( "EMAPA:16262") AnnotationAssertion( "FBbt:00003126") AnnotationAssertion( "FMA:49184") AnnotationAssertion( "GAID:75") AnnotationAssertion( "MA:0000341") AnnotationAssertion( "MA:0002474") AnnotationAssertion( "MAT:0000038") AnnotationAssertion( "MESH:D009055") AnnotationAssertion( "MIAA:0000038") AnnotationAssertion( "OpenCyc:Mx4rvVidh5wpEbGdrcN5Y29ycA") AnnotationAssertion( "TADS:0000040") AnnotationAssertion( "TAO:0000547") AnnotationAssertion( "TAO:0000590") AnnotationAssertion( "TGMA:0000131") AnnotationAssertion( "VHOG:0000280") AnnotationAssertion( "VHOG:0000812") AnnotationAssertion( "XAO:0003029") AnnotationAssertion( "ZFA:0000547") AnnotationAssertion( "ZFA:0000590") AnnotationAssertion( "galen:Mouth") AnnotationAssertion(Annotation( "BTO:0004698") "regio oralis") AnnotationAssertion(Annotation( "FMA:49184") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "regio oralis") AnnotationAssertion( "adult mouth") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "cavital oralis") AnnotationAssertion(Annotation( "BTO:0001090") "cavitas oris") AnnotationAssertion(Annotation( "BTO:0001090") "cavum oris") AnnotationAssertion(Annotation( "BTO:0001090") "mouth cavity") AnnotationAssertion(Annotation( "EHDAA2:0001326") "oral region") AnnotationAssertion(Annotation( "BTO:0001090") "oral vestibule") AnnotationAssertion(Annotation( "BTO:0001090") "rima oris") AnnotationAssertion( "stoma") AnnotationAssertion(Annotation( "VHOG:0000812") "stomatodaeum") AnnotationAssertion(Annotation( ) "trophic apparatus") AnnotationAssertion(Annotation( "BTO:0001090") "vestibule of mouth") AnnotationAssertion(Annotation( "BTO:0001090") "vestibulum oris") AnnotationAssertion( "UBERON:0000165") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "mouth") AnnotationAssertion(rdfs:seeAlso "https://github.com/obophenotype/uberon/issues/661"^^xsd:anyURI) AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/0/06/Mouth_illustration-Otis_Archives.jpg"^^xsd:anyURI) SubClassOf(Annotation( "the mouth contains structures such as jaw skeleton that may not strictly be considered tract parts") ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "exceptions in some taxa") ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (oral opening) AnnotationAssertion(Annotation( ) "The orifice that connects the mouth to the exterior of the body.") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000280") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "DOI:10.1016/j.semcdb.2007.06.002 Christiaen L, Jaszczyszyn Y, Kerfant M, Kanob S, Thermes V, Joly JS, Evolutionary modification of mouth position in deuterostomes. Seminars in Cell and Developmental Biology (2007)") "(...) mouth development is very similar in protostomes and 'basal' deuterostomes, whereas the chordate mouth seems to develop at a new position. Recent data for echinoderms and hemichordates further suggest that this change in mouth position may result from change in the influence of a conserved ectodermal patterning system on mouth development. It has been suggested that the mouths of vertebrates and urochordates may constitute a 'new' mouth.[well established][VHOG]") AnnotationAssertion( "FMA:59806") AnnotationAssertion(Annotation( "FMA:59806") "oral fissure") AnnotationAssertion(Annotation( "FMA:59806") "oral orifice") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "mouth") AnnotationAssertion( "oral part of face") AnnotationAssertion( "UBERON:0000166") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "oral opening") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (oral cavity) AnnotationAssertion(Annotation( ) Annotation( ) Annotation( "ISBN:0073040584"^^xsd:string) "Anatomical cavity at the start of the digestive tract that that is enclosed by the mouth. The boundaries and contents vary depending on the species. In vertebrates, the boundaries are the oral opening, the cheeks, the palate and (if present) the palatoglossal arch - if this is not present then the mouth and pharynx form the oropharyngeal cavity. The buccal cavity contains the teeth, tongue and palate (when present).") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0000960") Annotation( "AAO"^^xsd:string) Annotation( "AAO:EJS"^^xsd:string) "Anatomical cavity bounded anteriorly by the mouth and posteriorly by the derivatives of the branchial arches.[AAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000188") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( ) "The cavity of the mouth, bounded by the jaw bones and associated structures (muscles and mucosa). [TFD][VHOG]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000188") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0030223693 Liem KF, Bemis WE, Walker WF, Grande L, Functional Anatomy of the Vertebrates: An Evolutionary Perspective (2001) p.32") "Echinoderms, hemichordates, and chordates are called deuterostomes because the mouth arises not from the blastopore but from a second invagination at the anterior end of the larva that pushes in to connect with the archenteron.[well established][VHOG]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0000053") AnnotationAssertion( "AAO:0000960") AnnotationAssertion( "BSA:0000107") AnnotationAssertion( "CALOHA:TS-1315") AnnotationAssertion( "EFO:0001975") AnnotationAssertion( "EHDAA2:0001324") AnnotationAssertion( "EHDAA:6970") AnnotationAssertion( "EMAPA:17411") AnnotationAssertion( "EMAPA:18399") AnnotationAssertion( "EV:0100057") AnnotationAssertion( "FMA:20292") AnnotationAssertion( "HAO:0000669") AnnotationAssertion( "NCIT:C12421") AnnotationAssertion( "TAO:0001027") AnnotationAssertion( "TGMA:0000102") AnnotationAssertion(Annotation( "ncithesaurus:Oral_Cavity") "UMLS:C0226896") AnnotationAssertion( "VHOG:0000188") AnnotationAssertion( "WBbt:0005255") AnnotationAssertion( "XAO:0000126") AnnotationAssertion( "ZFA:0001027") AnnotationAssertion(Annotation( "FMA:20292") Annotation( "ISBN:0073040584"^^xsd:string) "buccal cavity") AnnotationAssertion( "cavity of mouth") AnnotationAssertion( "uberon") AnnotationAssertion( "bucca") AnnotationAssertion( "UBERON:0000167") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "oral cavity") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (proximal-distal subdivision of colon) AnnotationAssertion(Annotation( ) "A section dividing a colon along a proximal-distal axis.") AnnotationAssertion( "FMA:222905") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:222905") "segment of colon") AnnotationAssertion( "UBERON:0000168") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "proximal-distal subdivision of colon") SubClassOf(Annotation( "4") Annotation( "cjm"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (pair of lungs) AnnotationAssertion(Annotation( ) "The pair of anatomical structures comprised of a left lung and right lung.") AnnotationAssertion( "FMA:68877") AnnotationAssertion( "OpenCyc:Mx4rvVjKy5wpEbGdrcN5Y29ycA") AnnotationAssertion( "lungs") AnnotationAssertion( "lungs pair") AnnotationAssertion(Annotation( "FMA:68877") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "pulmones") AnnotationAssertion( "set of lungs") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0000170") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "pair of lungs") SubClassOf( ) SubClassOf( ObjectIntersectionOf(ObjectMinCardinality(1 ) ObjectMaxCardinality(1 ))) SubClassOf( ObjectIntersectionOf(ObjectMinCardinality(1 ) ObjectMaxCardinality(1 ))) SubClassOf(Annotation( "FMA-abduced") ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (respiration organ) AnnotationAssertion(Annotation( "GO:0007585") "Organ that functions in gaseous exchange between an organism and its environment. In plants, microorganisms, and many small animals, air or water makes direct contact with the organism's cells or tissue fluids, and the processes of diffusion supply the organism with dioxygen (O2) and remove carbon dioxide (CO2). In larger animals the efficiency of gaseous exchange is improved by specialized respiratory organs, such as lungs and gills, which are ventilated by breathing mechanisms.") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:17607") AnnotationAssertion( "SPD:0000428") AnnotationAssertion( "TGMA:0001247") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "apparatus respiratorius organ") AnnotationAssertion( "breathing organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "organ of apparatus respiratorius") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "organ of respiratory system") AnnotationAssertion( "respiratory organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "respiratory system organ") AnnotationAssertion( "uberon") AnnotationAssertion( "gas exchange organ") AnnotationAssertion( "UBERON:0000171") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "respiration organ") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (vomit) AnnotationAssertion(Annotation( ) Annotation( "ENVO:00000338") Annotation( "UBERON:cjm"^^xsd:string) "A bodily fluid consisting of the expulsed contents of the stomach disgorged through the mouth or nose that happens as a result of a vomit reflex.") AnnotationAssertion( "ENVO:00000338") AnnotationAssertion( "NCIT:C77666") AnnotationAssertion( "OpenCyc:Mx4rvViQTJwpEbGdrcN5Y29ycA") AnnotationAssertion( "galen:Vomitus") AnnotationAssertion(Annotation( ) "vomitus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0000172") AnnotationAssertion(rdfs:label "vomit") SubClassOf( ) # Class: (amniotic fluid) AnnotationAssertion(Annotation( "ENVO:02000021") Annotation( "MP:MP"^^xsd:string) "Amniotic fluid is a bodily fluid consisting of watery liquid surrounding and cushioning a growing fetus within the amnion. It allows the fetus to move freely without the walls of the uterus being too tight against its body. Buoyancy is also provided. The composition of the fluid changes over the course of gestation. Initially, amniotic fluid is similar to maternal plasma, mainly water with electrolytes. As the fetus develops, proteins, carbohydrates, lipids, phospholipids originating from the lungs, fetal cells, and urea are deposited in the fluid.") AnnotationAssertion( ) AnnotationAssertion( "BTO:0000068") AnnotationAssertion( "CALOHA:TS-0034") AnnotationAssertion( "EMAPA:36771") AnnotationAssertion( "ENVO:02000021") AnnotationAssertion( "EV:0100123") AnnotationAssertion( "FMA:305905") AnnotationAssertion( "GAID:1155") AnnotationAssertion( "MA:0002893") AnnotationAssertion( "MESH:D000653") AnnotationAssertion( "NCIT:C13188") AnnotationAssertion(Annotation( "ncithesaurus:Amniotic_Fluid") "UMLS:C0002638") AnnotationAssertion( "VHOG:0001267") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0000068") Annotation( ) "acqua amnii") AnnotationAssertion(Annotation( "BTO:0000068") Annotation( ) "liquor amnii") AnnotationAssertion( "UBERON:0000173") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "amniotic fluid") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (excreta) AnnotationAssertion(Annotation( ) Annotation( "GO:0007588") "A portion of organism substance that is the product of an excretion process that will be eliminated from the body. An excretion process is elimination by an organism of the waste products that arise as a result of metabolic activity.") AnnotationAssertion( "UBERON:0000324") AnnotationAssertion( "UBERON:0007550") AnnotationAssertion( "AEO:0000184") AnnotationAssertion( "BTO:0000491") AnnotationAssertion( "EHDAA2_RETIRED:0003184") AnnotationAssertion( "ENVO:02000022") AnnotationAssertion( "FMA:9674") AnnotationAssertion( "galen:Excretion") AnnotationAssertion( "excreted substance") AnnotationAssertion(Annotation( "FMA:9674") "portion of excreted substance") AnnotationAssertion(Annotation( "AEO:0000184") "waste substance") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0000491") "excretion") AnnotationAssertion( "UBERON:0000174") AnnotationAssertion(rdfs:label "excreta") SubClassOf( ) # Class: (pleural effusion) AnnotationAssertion(Annotation( "ENVO:02000033") "Pleural effusion is a bodily fluid that is produced in exess and accumulates in the pleural cavity, the fluid-filled space that surrounds the lungs. Excessive amounts of such fluid can impair breathing by limiting the expansion of the lungs during inhalation.") AnnotationAssertion( "cede to MPATH? Note the ncit class is under finding.") AnnotationAssertion( "ENVO:02000033") AnnotationAssertion( "OpenCyc:Mx4rLaTGCK2TEduAAAAOpmP6tw") AnnotationAssertion( "ncithesaurus:Pleural_Effusion") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0000175") AnnotationAssertion(rdfs:label "pleural effusion") SubClassOf( ) # Class: (oronasal secretion) AnnotationAssertion(Annotation( "ENVO:02000035") "A bodily fluid secreted from the body via the mouth or nose.") AnnotationAssertion( "ENVO:02000035") AnnotationAssertion( "oronasal discharge") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0000176") AnnotationAssertion(rdfs:label "oronasal secretion") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pus) AnnotationAssertion(Annotation( ) Annotation( "ENVO:02000038") "Pus is a bodily fluid consisting of a whitish-yellow or yellow substance produced during inflammatory responses of the body that can be found in regions of pyogenic bacterial infections. Pus is produced from the dead and living cells which travel into the intercellular spaces around the affected cells.") AnnotationAssertion(Annotation( "NCIT") "biospecimen in NCIT") AnnotationAssertion( ) AnnotationAssertion( "ENVO:02000038") AnnotationAssertion( "OpenCyc:Mx4rvVjG6ZwpEbGdrcN5Y29ycA") AnnotationAssertion( "galen:Pus") AnnotationAssertion( "ncithesaurus:Pus") AnnotationAssertion( "uberon") AnnotationAssertion( "purulent exudate") AnnotationAssertion( "UBERON:0000177") AnnotationAssertion(rdfs:label "pus") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/9/90/Swollen_eye_with_conjunctivitis.jpg"^^xsd:anyURI) SubClassOf( ) # Class: (blood) AnnotationAssertion(Annotation( ) Annotation( ) Annotation( ) Annotation( "FMA:9670") "A fluid that is composed of blood plasma and erythrocytes.") AnnotationAssertion( "This class excludes blood analogues, such as the insect analog of blood. See UBERON:0000179 haemolymphatic fluid.") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0000007") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "A complex mixture of cells suspended in a liquid matrix that delivers nutrients to cells and removes wastes. (Source: BioGlossary, www.Biology-Text.com)[TAO]") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0000046") Annotation( "AAO"^^xsd:string) Annotation( "AAO:LAP"^^xsd:string) "Highly specialized circulating tissue consisting of several types of cells suspended in a fluid medium known as plasma.[AAO]") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0000046") Annotation( "AAO"^^xsd:string) "relationship loss: subclass specialized connective tissue (AAO:0000571)[AAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000224") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "DOI:10.1146/annurev.cellbio.22.010605.093317 Hartenstein V, Blood cells and blood cell development in the animal kingdom. Annual review of cell and developmental biology (2006) ") "Recent findings strongly suggest that the molecular pathways involved in the development and function of blood cells are highly conserved among vertebrates and various invertebrates phyla. (...) There is now good reason to believe that, in vertebrates and invertebrates alike, blood cell lineages diverge from a common type of progenitor cell, the hemocytoblast.[well established][VHOG]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0000046") AnnotationAssertion( "BTO:0000089") AnnotationAssertion( "CALOHA:TS-0079") AnnotationAssertion( "EFO:0000296") AnnotationAssertion( "EHDAA2:0000176") AnnotationAssertion( "EHDAA:418") AnnotationAssertion( "EMAPA:16332") AnnotationAssertion( "ENVO:02000027") AnnotationAssertion( "EV:0100047") AnnotationAssertion( "FMA:9670") AnnotationAssertion( "GAID:965") AnnotationAssertion( "MA:0000059") AnnotationAssertion( "MESH:D001769") AnnotationAssertion( "MIAA:0000315") AnnotationAssertion( "NCIT:C12434") AnnotationAssertion( "OpenCyc:Mx4rvVjI8JwpEbGdrcN5Y29ycA") AnnotationAssertion( "TAO:0000007") AnnotationAssertion(Annotation( "ncithesaurus:Blood") "UMLS:C0005767") AnnotationAssertion( "VHOG:0000224") AnnotationAssertion( "XAO:0000124") AnnotationAssertion( "ZFA:0000007") AnnotationAssertion( "galen:Blood") AnnotationAssertion( "portion of blood") AnnotationAssertion( "vertebrate blood") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0000089") "whole blood") AnnotationAssertion( "UBERON:0000178") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "blood") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "CL:tm") ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "Bgee:AN"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (haemolymphatic fluid) AnnotationAssertion(Annotation( ) "Circulating fluid that is part of the hemolymphoid system. Blood, lymph, interstitial fluid or its analogs.") AnnotationAssertion( "cjm") AnnotationAssertion( "2009-04-08T04:38:19Z") AnnotationAssertion( "CARO:0000081") AnnotationAssertion( "uberon") AnnotationAssertion( "blood or blood analog") AnnotationAssertion( "circulating fluid") AnnotationAssertion( "UBERON:0000179") AnnotationAssertion(rdfs:label "haemolymphatic fluid") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lateral lumbar region of abdomen) AnnotationAssertion(Annotation( ) Annotation( ) "A region of the posterior torso (lower back) beneath the ribs and above the ilium.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "CALOHA:TS-2336") AnnotationAssertion( "FMA:14603") AnnotationAssertion( "NCIT:C93028") AnnotationAssertion(Annotation( "ncithesaurus:Flank") "UMLS:C0230171") AnnotationAssertion( "galen:Flank") AnnotationAssertion(Annotation( ) "flank") AnnotationAssertion(Annotation( "FMA:14603") "lateral region") AnnotationAssertion(Annotation( "FMA:14603") "lateral region of abdomen") AnnotationAssertion(Annotation( "FMA:14603") "latus") AnnotationAssertion(Annotation( "FMA:14603") "regio lateralis") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0000180") AnnotationAssertion(rdfs:label "lateral lumbar region of abdomen") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/4/4d/Gray1220.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (neck of radius) AnnotationAssertion(Annotation( ) "The narrow part of the shaft of the radius just below the head.") AnnotationAssertion( ) AnnotationAssertion( "FMA:23479") AnnotationAssertion( "galen:NeckOfRadius") AnnotationAssertion(Annotation( "_rib") "collum radii") AnnotationAssertion(Annotation( "FMA:23479") "radial neck") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0000199") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "neck of radius") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (gyrus) AnnotationAssertion(Annotation( ) Annotation( ) "A ridge on the cerebral cortex. It is generally surrounded by one or more sulci .") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0002495") AnnotationAssertion( "FMA:83874") AnnotationAssertion( "NCIT:C32290") AnnotationAssertion(Annotation( "ncithesaurus:Cerebral_Gyrus") "UMLS:C0458308") AnnotationAssertion(Annotation( "BTO:0002495") "cerebral gyrus") AnnotationAssertion(Annotation( "FMA:83874") "gyrus of neuraxis") AnnotationAssertion(Annotation( "FMA:83874") "neuraxis gyrus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "folia") AnnotationAssertion(Annotation( "PHENOSCAPE:wd") "folium") AnnotationAssertion( "folium of brain") AnnotationAssertion(Annotation( "BTO:0002495") Annotation( ) "gyri") AnnotationAssertion(Annotation( "BTO:0002495") Annotation( ) "gyri of cerebrum") AnnotationAssertion(Annotation( "FMA:83874") "gyrus of cerebral hemisphere") AnnotationAssertion(Annotation( "BTO:0002495") "gyrus of cerebrum") AnnotationAssertion( "UBERON:0000200") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "gyrus") AnnotationAssertion(rdfs:seeAlso "https://github.com/obophenotype/uberon/issues/573"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (endothelial blood brain barrier) AnnotationAssertion(Annotation( ) "A blood brain barrier that is composed of endothelial cells.") AnnotationAssertion( "cjm") AnnotationAssertion( "2009-04-10T08:15:44Z") AnnotationAssertion( "NIF_Subcellular:nlx_subcell_100205") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0000201") AnnotationAssertion(rdfs:label "endothelial blood brain barrier") SubClassOf( ) SubClassOf( ) # Class: (glial blood brain barrier) AnnotationAssertion(Annotation( ) "A blood brain barrier composed of glial cells.") AnnotationAssertion( "cjm") AnnotationAssertion( "2009-04-10T08:42:24Z") AnnotationAssertion( "FBbt:00007091") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0000202") AnnotationAssertion(rdfs:label "glial blood brain barrier") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pallium) AnnotationAssertion(Annotation( ) Annotation( ) Annotation( "GO:0021543") Annotation( "ISBN:0471888893"^^xsd:string) "Dorsal part (roof region) of the telencephalon[GO].") AnnotationAssertion(Annotation( ) ) AnnotationAssertion(Annotation( ) Annotation( "NCBITaxon:8782") "In the anatomy of animals, an avian pallium is the dorsal telencephalon of a bird's brain. Pallium of avian species tend to be relatively large, comprising ~75% of the telencephalic volume.") AnnotationAssertion(Annotation( "WP"^^xsd:string) "In humans the cerebrum has three parts: the archipallium, the paleopallium and the neopallium. The developing telencephalon or forebrain is divided into pallium and subpallium. In amphibians, the cerebrum includes archipallium, paleopallium and some of the basal nuclei. Reptiles first developed a neopallium, which continued to develop in the brains of more recent species to become the neocortex of humans and Old World monkeys. In fish, the archipallium is the largest part of the cerebrum. Some researchers suggest the early archipallium gave rise to the human hippocampus") AnnotationAssertion( "cjm") AnnotationAssertion( "2009-04-18T12:03:09Z") AnnotationAssertion( "UBERON:0007333") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0003399") AnnotationAssertion( "DMBA:15903") AnnotationAssertion( "EFO:0003534") AnnotationAssertion( "TAO:0000505") AnnotationAssertion( "TAO:0007007") AnnotationAssertion( "ZFA:0000505") AnnotationAssertion(Annotation( "ZFA:0000505") "area dorsalis telencephali") AnnotationAssertion(Annotation( "ISBN:0471888893"^^xsd:string) "dorsal part of telencephalon") AnnotationAssertion(Annotation( "ZFA:0000505") "dorsal telencephalic area") AnnotationAssertion(Annotation( "ZFA:0000505") "dorsal telencephalon") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0000203") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "pallium") AnnotationAssertion(rdfs:seeAlso "https://sourceforge.net/p/obo/zebrafish-anatomy-zfa-term-requests/87"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (ventral part of telencephalon) AnnotationAssertion(Annotation( ) Annotation( "GO:0021544") Annotation( "GO_REF:0000021") Annotation( "ISBN:0471888893"^^xsd:string) "Ventral part (base region) of the telencephalon.") AnnotationAssertion(Annotation( "BTO"^^xsd:string) "BTO term refers specifically to the avian structure") AnnotationAssertion( "cjm") AnnotationAssertion( "2009-04-18T12:12:27Z") AnnotationAssertion( "BTO:0003401") AnnotationAssertion( "DMBA:15751") AnnotationAssertion( "EFO:0003522") AnnotationAssertion( "TAO:0000304") AnnotationAssertion( "ZFA:0000304") AnnotationAssertion(Annotation( "ZFA:0000304") "area ventralis telencephali") AnnotationAssertion(Annotation( "GO:0021544") Annotation( "ZFA:0000304") "subpallium") AnnotationAssertion(Annotation( "ZFA:0000304") "ventral telencephalon") AnnotationAssertion(Annotation( "BTO:0003401") Annotation( "NCBITaxon:8782"^^xsd:string) "subpallium") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0000204") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "ventral part of telencephalon") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "separated by cell-free region") ObjectSomeValuesFrom( )) # Class: (obsolete cellular lens) AnnotationAssertion( "UBERON:0000965") AnnotationAssertion( "cjm") AnnotationAssertion( "2009-04-18T01:37:39Z") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0000208") AnnotationAssertion(rdfs:label "obsolete cellular lens") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (tetrapod frontal bone) AnnotationAssertion(Annotation( ) Annotation( ) Annotation( "ISBN:0-683-40008-8"^^xsd:string) Annotation( "MP:0000107") "The bone forming the forehead and roof of the eye orbit.") AnnotationAssertion( "fused in humans, paired in other animals") AnnotationAssertion( "In the mouse the parietal originates from cephalic paraxial mesoderm (Jiang 2000; Morriss-Kay 2001), whereas in the chicken it is traced back to either mesodermal (Noden 1978) or neural crest (Couly 1992, 1993).") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0000206") AnnotationAssertion( "EMAPA:19016") AnnotationAssertion( "FMA:52734") AnnotationAssertion( "GAID:226") AnnotationAssertion( "MA:0001466") AnnotationAssertion( "MESH:D005624") AnnotationAssertion( "NCIT:C32635") AnnotationAssertion(Annotation( "ncithesaurus:Frontal_Bone") "UMLS:C0016732") AnnotationAssertion( "VHOG:0001324") AnnotationAssertion( "VSAO:0000208") AnnotationAssertion(Annotation( "AAO:0000206") "frontal") AnnotationAssertion(Annotation( "FMA:52734") Annotation( "MA:0001466") Annotation( ) "frontal bone") AnnotationAssertion(Annotation( "FMA:52734") Annotation( "MA:0001466") Annotation( ) "frontal bone") AnnotationAssertion(Annotation( ) Annotation( ) "os frontal") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "os frontale") AnnotationAssertion( "UBERON:0000209") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "tetrapod frontal bone") AnnotationAssertion( "Frontal:bone.png"^^xsd:anyURI) AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/9/97/Gray136.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ) SubClassOf(Annotation( "cjm"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) # Class: (tetrapod parietal bone) AnnotationAssertion(Annotation( ) Annotation( "ZFA:0000514") "In humans: bone forming side and roof of cranium. Each bone is irregularly quadrilateral in form, and has two surfaces, four borders, and four angles.") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001326") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-3899370805 Arratia G, Schultze HP, Wilson MVH, Mesozoic Fishes 4 - Homology and Phylogeny (2008) p.23-48") "The homologization of cranial bones of actinopterygians with those of sarcopterygians based on the bone names established in human anatomy is favored in order to permit the building of phylogenetic relationship schemes beyond the taxonomic boundaries of osteichthyans (including tetrapods). (...) In actinopterygians, the terms parietal and postparietal bones have to replace the commonly used terms 'frontal' and 'parietal' bones for the two paired bones on the skull roof.[well established][VHOG]") AnnotationAssertion(Annotation( "WP"^^xsd:string) "The frontal bone in teleost fish is the homolog of the parietal bone in tetrapods[various]. In many non-mammalian tetrapods, they are bordered to the rear by a pair of postparietal bones that may be solely in the roof of the skull, or slope downwards to contribute to the back of the skull, depending on the species. In the living tuatara, and many fossil species, a small opening, the parietal foramen, lies between the two parietal bones. This opening is the location of a third eye in the midline of the skull, which is much smaller than the two main eyes") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0000390") AnnotationAssertion( "EMAPA:18715") AnnotationAssertion( "FMA:9613") AnnotationAssertion( "GAID:229") AnnotationAssertion( "MA:0001469") AnnotationAssertion( "MESH:D010294") AnnotationAssertion( "NCIT:C12766") AnnotationAssertion(Annotation( "ncithesaurus:Parietal_Bone") "UMLS:C0030558") AnnotationAssertion( "VHOG:0001324") AnnotationAssertion( "VHOG:0001326") AnnotationAssertion(Annotation( "TAO:0000514") "actinopterygian frontal bone") AnnotationAssertion(Annotation( "TAO:0000514") "frontal bone") AnnotationAssertion(Annotation( "AAO:0000390") Annotation( ) "parietal") AnnotationAssertion(Annotation( "FMA:9613") Annotation( ) "parietal bone") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "os parietale") AnnotationAssertion(Annotation( ) Annotation( ) "os parietale") AnnotationAssertion( "UBERON:0000210") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "tetrapod parietal bone") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/2/21/Gray132.png"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (ligament) AnnotationAssertion(Annotation( ) Annotation( "GO_REF:0000034"^^xsd:string) Annotation( "VSAO:0000073") "Dense regular connective tissue connecting two or more adjacent skeletal elements or supporting an organ.") AnnotationAssertion(Annotation( "FMA:21496") "Nonparenchymatous organ that primarily consists of dense connective tissue aggregated into fasciculi by connective tissue. Examples: sutural ligament, radiate sternocostal ligament, ligament of liver, ovarian ligament[FMA][FMA:21496].") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0001682") Annotation( "TAO"^^xsd:string) Annotation( "TAO:wd"^^xsd:string) "Portion of connective tissue that connects bone or cartilage.[TAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001272") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "PMID:8710894 Ohno S, The notion of the Cambrian pananimalia genome. PNAS (1996)") "Compared with their Ediacarian predecessor, Cambrian animals in general were characterized by their much stouter bodies. The stoutness of the body is likely due to the formation of ligaments and tendons, which in turn requires the crosslinking of collagen triple helices.[well established][VHOG]") AnnotationAssertion( "this groups both skeletal and non-skeletal ligaments. What is called a 'ligament' in many AOs is actually a skeletal ligament") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "CALOHA:TS-2145") AnnotationAssertion( "EFO:0001966") AnnotationAssertion( "EMAPA:35493") AnnotationAssertion( "FMA:21496") AnnotationAssertion( "FMA:30319") AnnotationAssertion( "MA:0000113") AnnotationAssertion( "MESH:D008022") AnnotationAssertion( "NCIT:C13046") AnnotationAssertion( "OpenCyc:Mx4rvVjqpZwpEbGdrcN5Y29ycA") AnnotationAssertion( "TAO:0001682") AnnotationAssertion(Annotation( "ncithesaurus:Ligament") "UMLS:C0023685") AnnotationAssertion( "VHOG:0001272") AnnotationAssertion( "XAO:0004031") AnnotationAssertion( "ZFA:0001675") AnnotationAssertion( "galen:Ligament") AnnotationAssertion(Annotation( "FMA:21496") "ligament organ") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0000211") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "ligament") AnnotationAssertion( "Knee:diagram.svg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (toilet claw) AnnotationAssertion(Annotation( ) "A specialized claw or nail on the foot of certain primates, used for personal grooming.") AnnotationAssertion( "cjm") AnnotationAssertion( "2009-05-19T08:19:58Z") AnnotationAssertion( ) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0000212") AnnotationAssertion(rdfs:label "toilet claw") SubClassOf( ) # Class: (vertebral arch of axis) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A neural arch that is part of a vertebral bone 2.") AnnotationAssertion( "FMA:24053") AnnotationAssertion( "vertebral foramen of cervical vertebra 2") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0000218") AnnotationAssertion(rdfs:label "vertebral arch of axis") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (vertebral foramen of atlas) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:24293") AnnotationAssertion( "vertebral foramen of cervical vertebra 1") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0000219") AnnotationAssertion(rdfs:label "vertebral foramen of atlas") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (atlanto-occipital joint) AnnotationAssertion(Annotation( ) "The Atlanto-occipital joint (articulation between the atlas and the occipital bone) consists of a pair of condyloid joints. The atlanto-occipital joint is a synovial joint. The ligaments connecting the bones are: Two Articular capsules; Posterior atlantoöccipital membrane; Anterior atlantoöccipital membrane; Lateral atlantoöccipital.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:24939") AnnotationAssertion( "NCIT:C32158") AnnotationAssertion(Annotation( "ncithesaurus:Atlanto-occipital_Joint") "UMLS:C0004169") AnnotationAssertion( "ncithesaurus:Atlanto-occipital_Joint-Atlanto") AnnotationAssertion(Annotation( "FMA:24939") "articulatio atlanto-occipitalis") AnnotationAssertion( "atlanto occipital joint") AnnotationAssertion( "atlantooccipital joint") AnnotationAssertion(Annotation( "FMA:24939") "craniovertebral joint") AnnotationAssertion( "occipito atlantal joint") AnnotationAssertion( "occipito-atlantal joint") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "articulatio atlantooccipitalis") AnnotationAssertion( "UBERON:0000220") AnnotationAssertion(rdfs:label "atlanto-occipital joint") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/d/d4/Gray304.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA-abduced-lr"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (supraauricular point) AnnotationAssertion(Annotation( ) "A craniometric point on the posterior root of the zygomatic process of the temporal bone directly above the auricular point.") AnnotationAssertion( "FMA:224222") AnnotationAssertion(Annotation( "FMA:224222") "supra-auricular part of head") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0000221") AnnotationAssertion(rdfs:label "supraauricular point") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (amniotic cavity) AnnotationAssertion(Annotation( "MP:0011199") "A closed space between the embryo and the amnion which contains the amniotic fluid and is formed by the fusion of the parts of the anterior and posterior amniotic folds.") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000855") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( ) "The closed sac between the embryo and the amnion, containing the amniotic fluid. [Free_Online_Medical_Dictionary]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0000025") AnnotationAssertion( "EHDAA2:0000119") AnnotationAssertion( "EHDAA:83") AnnotationAssertion( "EMAPA:16079") AnnotationAssertion( "FMA:63941") AnnotationAssertion( "NCIT:C34102") AnnotationAssertion(Annotation( "ncithesaurus:Amniotic_Cavity") "UMLS:C0230976") AnnotationAssertion( "VHOG:0000855") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "cavitas amniotica") AnnotationAssertion( "UBERON:0000301") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "amniotic cavity") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/5/55/Gray31.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "cjm"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "cjm"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (adductor longus) AnnotationAssertion(Annotation( ) "An adductor muscle that attaches to the hip and femur. In humans, it is a part of the adductor group of the thigh, that as the name suggests adducts the thigh. The adductor longus muscle forms the medial wall of the femoral triangle[WP, generalized].") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0010034") Annotation( "AAO"^^xsd:string) Annotation( "AAO:EJS"^^xsd:string) "Originates on the iliac portion of the ventral iliac rim and inserts on the lateral surface of the M. adductor magnus.[AAO]") AnnotationAssertion(Annotation( "AAO"^^xsd:string) "definition generalized to accommodate AAO class - 'Originates on the iliac portion of the ventral iliac rim and inserts on the lateral surface of the M. adductor magnus.' [AAO:0010034]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010034") AnnotationAssertion( "BTO:0000029") AnnotationAssertion( "EMAPA:36220") AnnotationAssertion( "FMA:22441") AnnotationAssertion( "adductor longus muscle") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0000029") "long adductor muscle") AnnotationAssertion(Annotation( ) Annotation( ) "musculus adductor longus") AnnotationAssertion(Annotation( "BTO:0000029") "musculus adductor longus") AnnotationAssertion( "UBERON:0000303") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "adductor longus") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/e/e2/Anterior_Hip_Muscles_2.PNG"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "Wikipedia"^^xsd:string) ) SubClassOf(Annotation( "pubic body just below the pubic crest") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "linea aspera") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (tendon sheath) AnnotationAssertion(Annotation( ) "A layer of membrane around a tendon. It has 2 layers: synovial sheath + fibrous tendon sheath.") AnnotationAssertion( "TODO - add layer relations. 'tendon sheath' GAT in FMA.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0000051") AnnotationAssertion( "FMA:45087") AnnotationAssertion( "FMA:76715") AnnotationAssertion( "NCIT:C96299") AnnotationAssertion(Annotation( "ncithesaurus:Tendon_Sheath") "UMLS:C0224856") AnnotationAssertion(Annotation( "FMA:45087") "synovial tendon sheath") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "vagina tendinis") AnnotationAssertion( "UBERON:0000304") AnnotationAssertion(rdfs:label "tendon sheath") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (amnion) AnnotationAssertion(Annotation( "MGI:csmith"^^xsd:string) Annotation( "MP:0005029") "The thin innermost layer of the extraembryonic membranes that contains the amniotic fluid; the membrane forms a closed sac in which the embryo and later, the fetus, is suspended and protected.") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000721") Annotation( "VHOG"^^xsd:string) Annotation( ) "A thin but tough extraembryonic membrane of reptiles, birds and mammals that lines the chorion and contains the fEtus and the amniotic fluid around it. [Biology_Online][VHOG]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000721") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0072528305 Kardong KV, Vertebrates: Comparative Anatomy, Function, Evolution (2006) p.187") "Structures homologous to the four extraembryonic membranes of reptiles and birds appear in mammals: amnion, chorion, yolk sac, and allantois.[well established][VHOG]") AnnotationAssertion( "amniotic") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0000065") AnnotationAssertion( "CALOHA:TS-0033") AnnotationAssertion( "EHDAA2:0000116") AnnotationAssertion( "EHDAA:136") AnnotationAssertion( "EMAPA:16109") AnnotationAssertion( "EV:0100122") AnnotationAssertion( "FMA:80223") AnnotationAssertion( "GAID:1298") AnnotationAssertion( "MESH:A16.254.403.277") AnnotationAssertion( "NCIT:C12365") AnnotationAssertion(Annotation( "ncithesaurus:Amnion") "UMLS:C0002630") AnnotationAssertion( "VHOG:0000721") AnnotationAssertion(Annotation( ) "amnios") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0000305") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "amnion") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/e/e7/Gray14.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "ISBN:0073040584"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "ISBN:0073040584-table5.4") ObjectSomeValuesFrom( )) SubClassOf(Annotation( "ISBN:0073040584-table5.4") ObjectSomeValuesFrom( )) # Class: (blastula) AnnotationAssertion(Annotation( ) "Organism at the blastula stage - an early stage of embryonic development in animals. It is produced by cleavage of a fertilized ovum and consists of a spherical layer of around 128 cells surrounding a central fluid-filled cavity called the blastocoel. The blastula follows the morula and precedes the gastrula in the developmental sequence.") AnnotationAssertion( "TODO - check relationship with epiblast. Note in FMA this is not a subclass of embryo, but in uberon embryo is the whole organism from zygote onwards and thus includes the blastula") AnnotationAssertion( "UBERON:0007011") AnnotationAssertion( ) AnnotationAssertion( "BILA:0000059") AnnotationAssertion( "BTO:0000128") AnnotationAssertion( "GAID:1294") AnnotationAssertion( "MESH:A16.254.270.274") AnnotationAssertion( "OGEM:000006") AnnotationAssertion( "OpenCyc:Mx4rEetFnKP2EdqAAAACs4vPlg") AnnotationAssertion(Annotation( "BILA:0000059") "blastula embryo") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "blastosphere") AnnotationAssertion( "UBERON:0000307") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "blastula") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/c/c6/Blastulation.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (body wall) AnnotationAssertion(Annotation( "MP:0003385") "The external portion of an animal body derived from ectoderm and mesoderm layers that encloses the body cavity.") AnnotationAssertion( "defined generically to encompass both vertebrates and invertebrates") AnnotationAssertion(Annotation( "BTO"^^xsd:string) "the BTO class refers to earthworms.") AnnotationAssertion( ) AnnotationAssertion( "BTO:0000139") AnnotationAssertion( "EMAPA:32761") AnnotationAssertion( "FMA:10427") AnnotationAssertion( "galen:BodyWall") AnnotationAssertion(Annotation( "FMA:10427") "wall fo trunk") AnnotationAssertion(Annotation( "FMA:10427") "trunk wall") AnnotationAssertion(Annotation( "FMA:10427") "wall of trunk") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0000309") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "body wall") SubClassOf( ) # Class: (breast) AnnotationAssertion(Annotation( ) "The upper ventral region of the torso of an organism.") AnnotationAssertion(Annotation( "WP,unvetted") "The breasts of a female primate's body contain the mammary glands, which secrete milk used to feed infants. Both men and women develop breasts from the same embryological tissues. However, at puberty female sex hormones, mainly estrogens, promote breast development, which does not happen with men. As a result women's breasts become more prominent than men's.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0000149") AnnotationAssertion( "CALOHA:TS-2083") AnnotationAssertion( "EV:0100124") AnnotationAssertion( "FMA:9601") AnnotationAssertion( "GAID:33") AnnotationAssertion( "MESH:D001940") AnnotationAssertion( "NCIT:C12971") AnnotationAssertion( "OpenCyc:Mx4rvVjV7ZwpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Breast") "UMLS:C0006141") AnnotationAssertion( "galen:Breast") AnnotationAssertion(Annotation( "FMA:9601") "mammary part of chest") AnnotationAssertion(Annotation( "FMA:9601") "mammary region") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "mamma") AnnotationAssertion( "UBERON:0000310") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "breast") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/6/6e/Closeup_of_female_breast.jpg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (extensor muscle) AnnotationAssertion(Annotation( ) Annotation( ) "A skeletal muscle whose contraction extends or stretches a body part.") AnnotationAssertion( ) AnnotationAssertion( "BTO:0000151") AnnotationAssertion( "FMA:75000") AnnotationAssertion( "uberon") AnnotationAssertion( "extensor") AnnotationAssertion( "UBERON:0000311") AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "Any of the muscles that increase the angle between segments of a limb, E.g. straightening the elbow or knee or bending the wrist or spine backward. The movement is usually directed backward, with the notable exception of the knee joint. In humans, certain muscles of the hand and foot are named for this function. In the hand these include the extensor carpi radialis brevis, extensor carpi radialis longus, and extensor carpi ulnaris, which run from the humerus along the back of the forearm to the metacarpal bones at the back of the hand. [http://www.britannica.com/EBchecked/topic/198909/extensor-muscle]") AnnotationAssertion(rdfs:label "extensor muscle") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (inner cambium layer of periosteum) AnnotationAssertion( "FMA:234358") AnnotationAssertion(Annotation( "FMA:234358") "cambial layer") AnnotationAssertion(Annotation( "FMA:234358") "cambial layer of periosteum") AnnotationAssertion( "cambium") AnnotationAssertion(Annotation( "FMA:234358") "cambium layer of periosteum") AnnotationAssertion(Annotation( "FMA:234358") "inner cambial layer of periosteum") AnnotationAssertion( "internal layer of periosteum") AnnotationAssertion( "internal periosteum") AnnotationAssertion(Annotation( ) "osteogenic layer of periosteum") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0000312") AnnotationAssertion(rdfs:label "inner cambium layer of periosteum") SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "Wikipedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (portion of cartilage tissue in tibia) AnnotationAssertion(Annotation( "Dorlands_Medical_Dictionary:MerckSource") "Cartilage pertaining to the tibia.") AnnotationAssertion( "This class represents a portion of cartilage tissue located in the tibia, *not* the cartilaginous condensation of an emrbyonic tibia") AnnotationAssertion( "BTO:0000207") AnnotationAssertion( "FMA:33923") AnnotationAssertion( "tibial cartilage") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:33923") "cartilage of tibia") AnnotationAssertion( "UBERON:0000313") AnnotationAssertion(rdfs:label "portion of cartilage tissue in tibia") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (cecum mucosa) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A mucosa that is part of a cecum [Automatically generated definition].") AnnotationAssertion( "BTO:0000213") AnnotationAssertion( "FMA:14998") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "caecum mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "caecum mucosa of organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "caecum mucous membrane") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "caecum organ mucosa") AnnotationAssertion(Annotation( "FMA:14998") "cecal mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "cecum mucosa of organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "cecum mucous membrane") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "cecum organ mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "intestinum crassum caecum mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "intestinum crassum caecum mucosa of organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "intestinum crassum caecum mucous membrane") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "intestinum crassum caecum organ mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of caecum") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of cecum") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of intestinum crassum caecum") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of organ of caecum") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of organ of cecum") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of organ of intestinum crassum caecum") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucous membrane of caecum") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucous membrane of cecum") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucous membrane of intestinum crassum caecum") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "organ mucosa of caecum") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "organ mucosa of cecum") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "organ mucosa of intestinum crassum caecum") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0000314") AnnotationAssertion(rdfs:label "cecum mucosa") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (subarachnoid space) AnnotationAssertion(Annotation( ) Annotation( ) Annotation( "GOC:add") "The space between the arachnoid and pia mater.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0000230") AnnotationAssertion( "EMAPA:32666") AnnotationAssertion( "FMA:83716") AnnotationAssertion( "GAID:689") AnnotationAssertion( "MESH:D013346") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0000230") Annotation( ) "cavitas subarachnoidea") AnnotationAssertion(Annotation( ) Annotation( ) "cavum subarachnoideale") AnnotationAssertion(Annotation( "BTO:0000230") Annotation( ) "spatium leptomeningeum") AnnotationAssertion(Annotation( ) Annotation( ) "spatium subarachnoideum") AnnotationAssertion(Annotation( "BTO:0000230") Annotation( ) "spatium subarachnoideum") AnnotationAssertion(Annotation( "BTO:0000230") "subarachnoid cavity") AnnotationAssertion( "UBERON:0000315") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "subarachnoid space") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/5/5f/Gray769-en.svg"^^xsd:anyURI) AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/f/f8/Gray769.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "ISBN:0471888893"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (cervical mucus) AnnotationAssertion(Annotation( ) Annotation( ) Annotation( "BTO:0000242") "A substance produced by the cervix and endocervical glands[BTO]. Thick acidic mucus that blocks the cervical os after mestruation[WP]. This 'infertile' mucus blocks spermatozoa from entering the uterus.") AnnotationAssertion( ) AnnotationAssertion( "BTO:0000242") AnnotationAssertion( "FMA:83689") AnnotationAssertion( "MESH:D002582") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "cervix mucus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0000316") AnnotationAssertion(rdfs:label "cervical mucus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (colonic mucosa) AnnotationAssertion(Annotation( ) "Mucosa that is part of a colon. The mucosa of the colon is lined by a simple columnar epithelium with a thin brush border and numerous goblet cells.") AnnotationAssertion( "UBERON:0003347") AnnotationAssertion( "UBERON:0004981") AnnotationAssertion( ) AnnotationAssertion( "BTO:0000271") AnnotationAssertion( "CALOHA:TS-0164") AnnotationAssertion( "EFO:0003038") AnnotationAssertion( "EMAPA:27375") AnnotationAssertion( "FMA:14984") AnnotationAssertion( "FMA:85388") AnnotationAssertion( "MA:0003194") AnnotationAssertion(Annotation( "FMA:14984") "colon mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "colon mucous membrane") AnnotationAssertion( "colonic mucosa") AnnotationAssertion(Annotation( "FMA:14984") "colonic mucous membrane") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "large bowel mucosa") AnnotationAssertion(Annotation( "FMA:14984") "mucosa of colon") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of large bowel") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0000317") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "colonic mucosa") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (cytotrophoblast) AnnotationAssertion(Annotation( ) Annotation( ) "The inner layer of the trophoblast, interior to the syncytiotrophoblast in an embryo. It serves to anchor the embryonic chorion to the maternal endometrium. Cytotrophoblasts are stem cells in the chorionic villi. During differentiation, mononuclear cytotrophoblast fuse together into the multinucleated syncytiotrophoblasts. The primary villi has only the cytotrophoblast as an axe. [WP,unvetted].") AnnotationAssertion( "todo - unify with EHDAA2, which distinguishes multiple types of cytotrophoblast") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000683") Annotation( "VHOG"^^xsd:string) Annotation( ) "A derivative layer of the trophoblast, the cells of which retain their boundaries and contribute to the extraembryonic mesoderm [Evolution, Fourth_Edition_(2006)_McGraw-Hill, Function, Vertebrates:_Comparative_Anatomy, p.189, see_Kardong_KV][VHOG]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0000322") AnnotationAssertion( "EHDAA:127") AnnotationAssertion( "EHDAA:152") AnnotationAssertion( "EHDAA:89") AnnotationAssertion( "EMAPA:16067") AnnotationAssertion( "FMA:83039") AnnotationAssertion( "NCIT:C33919") AnnotationAssertion(Annotation( "ncithesaurus:Cytotrophoblast") "UMLS:C0230960") AnnotationAssertion( "VHOG:0000683") AnnotationAssertion(Annotation( "FMA:83039") "cellular trophoblast") AnnotationAssertion(Annotation( ) "cytotrophoblastic cell layer") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "Langhans' layer") AnnotationAssertion(Annotation( "FMA:83039") "cytotrophoblastic cell") AnnotationAssertion(Annotation( ) Annotation( ) "cytotrophoblastus") AnnotationAssertion(Annotation( ) "layer of Langhans") AnnotationAssertion( "UBERON:0000319") AnnotationAssertion(rdfs:label "cytotrophoblast") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/d/df/Gray36.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (duodenal mucosa) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A mucosa that is part of a duodenum [Automatically generated definition].") AnnotationAssertion( "UBERON:0003348") AnnotationAssertion( ) AnnotationAssertion( "BTO:0000367") AnnotationAssertion( "CALOHA:TS-0213") AnnotationAssertion( "EMAPA:27235") AnnotationAssertion( "FMA:14942") AnnotationAssertion( "MA:0003207") AnnotationAssertion(Annotation( "FMA:14942") "doudenal mucosa") AnnotationAssertion(Annotation( "FMA:14942") "duodenal mucous membrane") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of duodenum") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucous membrane of duodenum") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0000367") "duodenum mucosa") AnnotationAssertion( "UBERON:0000320") AnnotationAssertion(rdfs:label "duodenal mucosa") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (late embryo) AnnotationAssertion(Annotation( "BGEE:ANiknejad") "An embryo that is at the late embryonic stage; this stage covers late steps of the embryogenesis with a fully formed embryo still developing before birth or egg hatching.") AnnotationAssertion( "TODO - check fetus/embryo. WP: An embryo is a multicellular diploid eukaryote in its earliest stage of development, from the time of first cell division until birth, hatching, or germination. In humans, it is called an embryo until about eight weeks after fertilization (i.e. ten weeks LMP), and from then it is instead called a fetus.") AnnotationAssertion(Annotation( "FMA:63919") "Fetal structure, which is a developmental form of a vertebrate animal at any given time point from 8 weeks of gestation to birth (or hatching). Examples: There is only one fetus[FMA:63919].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0000449") AnnotationAssertion( "CALOHA:TS-0360") AnnotationAssertion( "EFO:0001323") AnnotationAssertion( "FBbt:00005333") AnnotationAssertion( "FMA:63919") AnnotationAssertion( "GAID:552") AnnotationAssertion( "MESH:D005333") AnnotationAssertion( "NCIT:C13235") AnnotationAssertion( "OpenCyc:Mx4rvZfC2ZwpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Fetus") "UMLS:C0015965") AnnotationAssertion(Annotation( "BTO:0000449") "fetus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0000449") "embryo late growth stage") AnnotationAssertion(Annotation( "BTO:0000449") "embryo late stage") AnnotationAssertion( "UBERON:0000323") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "late embryo") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (gastric gland) AnnotationAssertion(Annotation( "MGI:anna"^^xsd:string) "The branched tubular glands found in the mucosa of the fundus and body of the stomach which contain parietal cells that secrete hydrochloric acid and zymogenic cells that produce pepsin.") AnnotationAssertion( "BTO:0000503") AnnotationAssertion( "EMAPA:27181") AnnotationAssertion( "FMA:14919") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0000325") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "gastric gland") SubClassOf(Annotation( "cjm"^^xsd:string) ) SubClassOf( ) SubClassOf(Annotation( "ISBN:0073040584"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (pancreatic juice) AnnotationAssertion(Annotation( "GO:0030157") "Pancreatic juice is slightly alkaline and contains numerous enzymes and inactive enzyme precursors including alpha-amylase, chymotrypsinogen, lipase, procarboxypeptidase, proelastase, prophospholipase A2, ribonuclease, and trypsinogen. Its high concentration of bicarbonate ions helps to neutralize the acid from the stomach.") AnnotationAssertion( "BTO:0000504") AnnotationAssertion( "CALOHA:TS-2235") AnnotationAssertion( "FMA:62973") AnnotationAssertion( "GAID:1166") AnnotationAssertion( "MESH:D010189") AnnotationAssertion( "uberon") AnnotationAssertion( "pancreatic fluid") AnnotationAssertion( "pancreatic secretion") AnnotationAssertion(Annotation( "BTO:0000504") "succus pancreaticus") AnnotationAssertion( "UBERON:0000326") AnnotationAssertion(rdfs:label "pancreatic juice") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (gut wall) AnnotationAssertion(Annotation( ) "The wall of the digestive tract. This encompasses all parts of the digestive tract with the exception of the lumen (cavity).") AnnotationAssertion( "We model the digestive tract as consisting of two parts: the wall and the lumen.") AnnotationAssertion( "BTO:0000547") AnnotationAssertion( "FMA:45653") AnnotationAssertion( "digestive tract wall") AnnotationAssertion( "wall of digestive tract") AnnotationAssertion(Annotation( "FMA:45653") "wall of gut") AnnotationAssertion( "uberon") AnnotationAssertion( "wall of alimentary tract") AnnotationAssertion( "UBERON:0000328") AnnotationAssertion(rdfs:label "gut wall") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (hair root) AnnotationAssertion(Annotation( ) Annotation( "BTO:0000555") "The enlarged basal part of a hair within the skin[BTO]. The root of the hair ends in an enlargement, the hair bulb, which is whiter in color and softer in texture than the shaft, and is lodged in a follicular involution of the epidermis called the hair follicle. [Wikipedia].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0000555") AnnotationAssertion( "CALOHA:TS-0433") AnnotationAssertion( "FMA:70730") AnnotationAssertion( "NCIT:C32707") AnnotationAssertion( "NCIT:C32711") AnnotationAssertion(Annotation( "ncithesaurus:Hair_Root") "UMLS:C1182707") AnnotationAssertion(Annotation( "FMA:70730") "root of hair") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0000329") AnnotationAssertion(rdfs:label "hair root") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/5/5e/Gray944.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (ileal mucosa) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A mucosa that is part of a ileum [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( "BTO:0000619") AnnotationAssertion( "CALOHA:TS-0470") AnnotationAssertion( "EMAPA:35424") AnnotationAssertion( "FMA:14956") AnnotationAssertion( "MA:0003216") AnnotationAssertion(Annotation( "FMA:14956") "ileal mucous membrane") AnnotationAssertion(Annotation( "FMA:14956") "ileum mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "ileum mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "ileum mucosa of organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "ileum mucous membrane") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "ileum organ mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of ileum") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of organ of ileum") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucous membrane of ileum") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "organ mucosa of ileum") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0000331") AnnotationAssertion(rdfs:label "ileal mucosa") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (yellow bone marrow) AnnotationAssertion(Annotation( ) "Bone marrow in which the fat cells predominate in the meshes of the reticular network.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0000635") AnnotationAssertion( "FMA:74596") AnnotationAssertion(Annotation( "BTO:0000635") Annotation( ) "medulla ossium flava") AnnotationAssertion(Annotation( "BTO:0000635") "yellow marrow") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0000635") "fat marrow") AnnotationAssertion( "UBERON:0000332") AnnotationAssertion(rdfs:label "yellow bone marrow") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (intestinal gland) AnnotationAssertion(Annotation( ) "A gland that is part of the intestinal mucosa. Examples include the intestinal crypts, duodenal gland[cjm].") AnnotationAssertion( "Note that some sources treat 'intestinal gland' as synonymous with crypts") AnnotationAssertion( ) AnnotationAssertion( "BTO:0000640") AnnotationAssertion( "FMA:15052") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bowel mucosa gland") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bowel mucosa of organ gland") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bowel mucous membrane gland") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bowel organ mucosa gland") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "gland of bowel mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "gland of bowel mucosa of organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "gland of bowel mucous membrane") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "gland of bowel organ mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "gland of intestinal mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "gland of intestine mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "gland of intestine mucosa of organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "gland of intestine mucous membrane") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "gland of intestine organ mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "gland of mucosa of bowel") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "gland of mucosa of intestine") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "gland of mucosa of organ of bowel") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "gland of mucosa of organ of intestine") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "gland of mucous membrane of bowel") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "gland of mucous membrane of intestine") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "gland of organ mucosa of bowel") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "gland of organ mucosa of intestine") AnnotationAssertion(Annotation( "FMA:15052") "glandula intestinalis") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "intestinal mucosa gland") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "intestine mucosa gland") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "intestine mucosa of organ gland") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "intestine mucous membrane gland") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "intestine organ mucosa gland") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of bowel gland") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of intestine gland") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of organ of bowel gland") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of organ of intestine gland") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucous membrane of bowel gland") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucous membrane of intestine gland") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "organ mucosa of bowel gland") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "organ mucosa of intestine gland") AnnotationAssertion( "uberon") AnnotationAssertion( "glandulae intestinales") AnnotationAssertion( "UBERON:0000333") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "intestinal gland") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (throat) AnnotationAssertion(Annotation( ) "In anatomy, the throat is the anterior part of the neck, in front of the vertebral column. It consists of the pharynx and larynx. An important feature of the throat is the epiglottis, a flap which separates the esophagus from the trachea and prevents inhalation of food or drink. The throat contains various blood vessels, various pharyngeal muscles, the trachea (windpipe) and the esophagus. The hyoid bone and the clavicle are the only bones located in the throat of mammals. It is sometimes considered a synonym for fauces. [WP,unvetted].") AnnotationAssertion( "gular") AnnotationAssertion( "The hyoid bone and the clavicle are the only bones located in the throat of mammals.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0000828") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37973") AnnotationAssertion( "FMA:228738") AnnotationAssertion( "NCIT:C54272") AnnotationAssertion( "OpenCyc:Mx4rwQtO_JwpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Throat") "UMLS:C0230069") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "gula") AnnotationAssertion( "UBERON:0000341") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "throat") AnnotationAssertion( "Throat:Diagram.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (mucosa) AnnotationAssertion(Annotation( ) "A lining of mostly endodermal origin, covered in epithelium, which is involved in absorption and secretion. They line various body cavities that are exposed to the external environment and internal organs. It is at several places continuous with skin: at the nostrils, the lips, the ears, the genital area, and the anus. The sticky, thick fluid secreted by the mucous membranes and gland is termed mucus. The term mucous membrane refers to where they are found in the body and not every mucous membrane secretes mucus[WP].") AnnotationAssertion( "mucosal") AnnotationAssertion(Annotation( "FMA"^^xsd:string) "FMA has mucosa vs region of mucosa; these are subtypes of Mucosa: Mucosa of gallbladder, tongue, .... The following are subtypes of Region of mucosa: Mucosa of zone of stomach, trachea, bronchus, dorsum of tongue.... Depends on whether the covered area is an organ or organ component. Uberon does not regard organ vs organ component as crucial distinction and thus collapses these into a single class deliberately") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AEO:0000199") AnnotationAssertion( "BTO:0000886") AnnotationAssertion( "CALOHA:TS-2031") AnnotationAssertion( "EHDAA2_RETIRED:0003234") AnnotationAssertion( "EV:0100382") AnnotationAssertion( "FMA:85355") AnnotationAssertion( "FMA:85358") AnnotationAssertion( "GAID:297") AnnotationAssertion( "MESH:D009092") AnnotationAssertion( "NCIT:C13166") AnnotationAssertion( "OpenCyc:Mx4rvmKNOpwpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Mucosa") "UMLS:C0026724") AnnotationAssertion( "galen:Mucosa") AnnotationAssertion(Annotation( "FMA:85355") "mucosa of organ") AnnotationAssertion(Annotation( "FMA:85358") "mucosa of organ part") AnnotationAssertion(Annotation( "FMA:85358") "mucosal region") AnnotationAssertion(Annotation( "FMA:85355") "mucous membrane") AnnotationAssertion(Annotation( "FMA:85355") "organ mucosa") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:85358") "region of mucosa") AnnotationAssertion(Annotation( ) Annotation( ) "tunica mucosa") AnnotationAssertion(Annotation( "BTO:0000886") "tunica mucosa") AnnotationAssertion( "UBERON:0000344") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "mucosa") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/4/4e/Ens.png"^^xsd:anyURI) AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/en/thumb/4/4e/Ens.png/200px-Ens.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (myelin) AnnotationAssertion(Annotation( ) "A dielectric (electrically insulating) material consisting of protein and fat that forms a layer, the myelin sheath, usually around only the axon of a neuron. Myelin is about 40 % water; the dry mass of myelin is about 70 - 85 % lipids and about 15 - 30 % proteins. Some of the proteins that make up myelin are myelin basic protein (MBP), myelin oligodendrocyte glycoprotein (MOG), and proteolipid protein (PLP). The primary lipid of myelin is a glycolipid called galactocerebroside (GalC). The intertwining hydrocarbon chains of sphingomyelin serve to strengthen the myelin sheath.") AnnotationAssertion( "cede to other ontology. Retired in ncit") AnnotationAssertion(Annotation( ) ) AnnotationAssertion(Annotation( ) ) AnnotationAssertion(Annotation( ) ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0000894") AnnotationAssertion( "FMA:62977") AnnotationAssertion( "ncithesaurus:Myelin") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0000345") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "myelin") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete myelin membrane) AnnotationAssertion(Annotation( "BTO"^^xsd:string) "BTO has def The multilamellar myelin membrane is a specisalised lipid-rich domain of the glial cell plasma membrane. FMA has primary term name Myelinated plasma membrane of Schwann cell") AnnotationAssertion( "BTO:0000895") AnnotationAssertion( "FMA:73417") AnnotationAssertion(Annotation( "FMA:73417") "myelinated plasma membrane of Schwann cell") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0000346") AnnotationAssertion(rdfs:label "obsolete myelin membrane") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (entire myelin sheath) AnnotationAssertion(Annotation( "MP:0003871") "The insulating envelope that surrounds nerve fibers or axons.") AnnotationAssertion( "do not cede to GO until GO includes has_part link to myelin") AnnotationAssertion( ) AnnotationAssertion( "BTO:0000900") AnnotationAssertion( "CALOHA:TS-2363") AnnotationAssertion( "FMA:62983") AnnotationAssertion( "GAID:731") AnnotationAssertion( "GO:0043209") AnnotationAssertion( "MESH:D009186") AnnotationAssertion( "NCIT:C13261") AnnotationAssertion(Annotation( "ncithesaurus:Myelin_Sheath") "UMLS:C0026973") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0000900") "medullary sheath") AnnotationAssertion( "UBERON:0000347") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "entire myelin sheath") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (ophthalmic nerve) AnnotationAssertion(Annotation( ) Annotation( "MP:0009798") "The sensory nerve subdivision of the trigeminal nerve that transmits sensory information from the orbit and its contents, the nasal cavity and the skin of the nose and forehead.") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0010648") Annotation( "AAO"^^xsd:string) Annotation( "AAO:EJS"^^xsd:string) "Sensory medial ramus of the trigeminal nerve.[AAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001349") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0471210054 Butler AB and Hodos W, Comparative vertebrate neuroanatomy: Evolution and Adaptation (2005) p.177") "The profundus nerve is a distinct nerve only in fishes. (...) In mammals, the profundus nerve is the same as the most rostral (ophthalmic) branch of the trigeminal nerve.[well established][VHOG]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010648") AnnotationAssertion( "BTO:0000926") AnnotationAssertion( "EHDAA2:0002088") AnnotationAssertion( "EHDAA:3744") AnnotationAssertion( "EMAPA:17800") AnnotationAssertion( "FMA:52621") AnnotationAssertion( "GAID:837") AnnotationAssertion( "MA:0001104") AnnotationAssertion( "MESH:D009882") AnnotationAssertion( "NCIT:C33215") AnnotationAssertion( "OpenCyc:Mx4rwEs_K5wpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Ophthalmic_Nerve") "UMLS:C0029082") AnnotationAssertion( "VHOG:0001349") AnnotationAssertion(Annotation( ) "cranial nerve V, branch V1") AnnotationAssertion(Annotation( ) "first branch of fifth cranial nerve") AnnotationAssertion(Annotation( "FMA:52621") "first division of fifth cranial nerve") AnnotationAssertion(Annotation( "FMA:52621") "first division of trigeminal nerve") AnnotationAssertion(Annotation( "FMA:52621") "nervus ophthalmicus (V1)") AnnotationAssertion(Annotation( "FMA:52621") "nervus ophthalmicus (Va)") AnnotationAssertion(Annotation( "FMA:52621") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "nervus ophthalmicus [v1]") AnnotationAssertion(Annotation( "FMA:52621") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "nervus ophthalmicus [va]") AnnotationAssertion(Annotation( "FMA:52621") "ophthalmic division [V1]") AnnotationAssertion(Annotation( "FMA:52621") "ophthalmic division [Va]") AnnotationAssertion(Annotation( "FMA:52621") "ophthalmic division of fifth cranial nerve") AnnotationAssertion(Annotation( "FMA:52621") "ophthalmic division of trigeminal nerve (V1)") AnnotationAssertion(Annotation( "FMA:52621") "ophthalmic division of trigeminal nerve (Va)") AnnotationAssertion(Annotation( "FMA:52621") "ophthalmic nerve [V1]") AnnotationAssertion(Annotation( "FMA:52621") "ophthalmic nerve [Va]") AnnotationAssertion(Annotation( ) "opthalmic nerve") AnnotationAssertion(Annotation( "AAO:0010648") "ramus opthalmicus profundus (ramus V1)") AnnotationAssertion(Annotation( ) "rostral branch of trigeminal nerve") AnnotationAssertion(Annotation( "MA:0001104") "trigeminal V nerve ophthalmic division") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "ciliary nerve") AnnotationAssertion(Annotation( ) "ethmoidal nerve") AnnotationAssertion(Annotation( ) "ophthalmic division") AnnotationAssertion(Annotation( "BTO:0000926") "ophthalmic division") AnnotationAssertion(Annotation( ) "profundal nerve") AnnotationAssertion(Annotation( ) "profundus") AnnotationAssertion(Annotation( ) "profundus nerve") AnnotationAssertion(Annotation( "EMAPA:17800") "trigeminal nerve ophthalmic division") AnnotationAssertion( "UBERON:0000348") AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "Terminology notes. This nerve is known by a ridiculous number of names[http://palaeos.com/vertebrates/glossary/glossaryPo.html]") AnnotationAssertion(rdfs:label "ophthalmic nerve") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "may be a distinct nerve in teleosts") Annotation( "multiple"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (limbic system) AnnotationAssertion(Annotation( ) Annotation( "BIRNLEX:Limbic_system") "A set of midline structures surrounding the brainstem of the mammalian brain, originally described anatomically, e.g., hippocampal formation, amygdala, hypothalamus, cingulate cortex. Although the original designation was anatomical, the limbic system has come to be associated with the system in the brain subserving emotional functions. As such, it is very poorly defined and doesn't correspond closely to the anatomical meaning any longer. [BirnLex].") AnnotationAssertion( "obsoletion proposes. The current part_of children were chosen as the intersection of what is stated in wikipedia and in the FMA. NIF: We are including Limbic System because it is still used by neuroscientists and others, but as a data annotation term, it is very poor because it is not a clearly defined entity.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0000928") AnnotationAssertion( "CALOHA:TS-1307") AnnotationAssertion( "FMA:242000") AnnotationAssertion( "GAID:615") AnnotationAssertion( "MESH:A08.186.211.577") AnnotationAssertion( "NCIT:C94541") AnnotationAssertion( "OpenCyc:Mx4rwAeba5wpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Limbic_System") "UMLS:C0023715") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "ISBN:0123813611"^^xsd:string) "visceral brain") AnnotationAssertion( "UBERON:0000349") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "includes the hippocampus, amygdala, anterior thalamic nuclei, and limbic cortex, which support a variety of functions including emotion, behavior, long term memory, and olfaction [Wikipedia]") AnnotationAssertion(rdfs:label "limbic system") AnnotationAssertion( "Brain:limbicsystem.jpg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (nuchal ligament) AnnotationAssertion(Annotation( ) "A fibrous membrane, which, in the neck, represents the supraspinal ligaments of the upper vertebrae.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "In humans it is a tendon-like structure that has developed independently in humans and other animals well adapted for running. In some four legged animals, particularly ungulates, the nuchal ligament serves to sustain the weight of the head") AnnotationAssertion( "As it is required for running, not all animals have a nuchal ligament") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0000952") AnnotationAssertion( "EMAPA:19207") AnnotationAssertion( "FMA:13427") AnnotationAssertion(Annotation( "FMA:13427") "ligament of neck") AnnotationAssertion(Annotation( "FMA:13427") Annotation( ) "ligamentum nuchae") AnnotationAssertion(Annotation( ) Annotation( "NCBITaxon:9895") "paddywhack") AnnotationAssertion( "uberon") AnnotationAssertion( "paxwax") AnnotationAssertion( "UBERON:0000351") AnnotationAssertion(rdfs:label "nuchal ligament") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "BTO"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "C7 in humans") ObjectSomeValuesFrom( )) # Class: (parenchyma) AnnotationAssertion(Annotation( ) "Functional part of an organ in the body. This is in contrast to the stroma, which refers to the structural tissue of organs, being exactly, connective tissues.") AnnotationAssertion( "parenchymal") AnnotationAssertion(Annotation( "WP"^^xsd:string) "Early in development the mammalian embryo has three distinct layers: ectoderm (external layer), endoderm (internal layer) and in between those two layers the middle layer or mesoderm. The parenchyma of most organs is of ectodermal (brain, skin) or endodermal origin (lungs, gastrointestinal tract, liver, pancreas). The parenchyma of a few organs (spleen, kidneys, heart) is of mesodermal origin. The stroma of all organs is of mesodermal origin") AnnotationAssertion(Annotation( "FMA"^^xsd:string) "the FMA definition is more restrictive, and limits this to solid organs. This would seem to cause problems for the lung parenchyma, except FMA classifies Lung as solid rather than cavitated") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EHDAA:3015") AnnotationAssertion( "EHDAA:3905") AnnotationAssertion( "EHDAA:3999") AnnotationAssertion( "EHDAA:4005") AnnotationAssertion( "EHDAA:6899") AnnotationAssertion( "EHDAA:6903") AnnotationAssertion( "EHDAA:6994") AnnotationAssertion( "EHDAA:8086") AnnotationAssertion( "EHDAA:9182") AnnotationAssertion( "EHDAA:9190") AnnotationAssertion( "EHDAA:9196") AnnotationAssertion( "EHDAA:9202") AnnotationAssertion( "FMA:45732") AnnotationAssertion( "NCIT:C74601") AnnotationAssertion(Annotation( "ncithesaurus:Parenchyma") "UMLS:C0933845") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0000353") AnnotationAssertion(rdfs:label "parenchyma") SubClassOf( ) DisjointClasses( ) # Class: (pharyngeal mucosa) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A mucosa that is part of a pharynx [Automatically generated definition].") AnnotationAssertion( "UBERON:0003344") AnnotationAssertion( ) AnnotationAssertion( "BTO:0001047") AnnotationAssertion( "EMAPA:26957") AnnotationAssertion( "FMA:55031") AnnotationAssertion( "MA:0003143") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of organ of pharynx") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of pharynx") AnnotationAssertion(Annotation( "FMA:55031") "mucous membrane of pharynx") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucous membrane of pharynx") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "organ mucosa of pharynx") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "pharynx mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "pharynx mucosa of organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "pharynx mucous membrane") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "pharynx organ mucosa") AnnotationAssertion(Annotation( "FMA:55031") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "tunica mucosa pharyngea") AnnotationAssertion( "tunica mucosa pharyngis") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0001047") "mucous membrane of the pharynx") AnnotationAssertion( "UBERON:0000355") AnnotationAssertion(rdfs:label "pharyngeal mucosa") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (blastocyst) AnnotationAssertion(Annotation( ) Annotation( "GO:0001824") "The mammalian blastocyst is a hollow ball of cells containing two cell types, the inner cell mass and the trophectoderm[GO].") AnnotationAssertion( "Gilbert fig11.32 has blastocyst has giving rise to ICM and trophoblast (which in this source is a synonym for trophectoderm)") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0001099") AnnotationAssertion( "CALOHA:TS-0076") AnnotationAssertion( "EFO:0000295") AnnotationAssertion( "EMAPA:36035") AnnotationAssertion( "EV:0100394") AnnotationAssertion( "FMA:83041") AnnotationAssertion( "GAID:1153") AnnotationAssertion( "MESH:A16.254.085") AnnotationAssertion( "NCIT:C13739") AnnotationAssertion(Annotation( "ncithesaurus:Blastocyst") "UMLS:C1281743") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "blastocystis") AnnotationAssertion(Annotation( "FMA:83041") "blastula") AnnotationAssertion( "UBERON:0000358") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "blastocyst") AnnotationAssertion( "Blastocyst:English.svg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete rectal gland) AnnotationAssertion( "UBERON:0004757") AnnotationAssertion( "UBERON:0004758") AnnotationAssertion( "UBERON:0004759") AnnotationAssertion( "UBERON:0004760") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0000360") AnnotationAssertion(rdfs:label "obsolete rectal gland") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (red bone marrow) AnnotationAssertion(Annotation( ) "The red vascular substance consisting of connective tissue and blood vessels, containing primitive blood cells, macrophages, megakaryocytes, and fat cells. Red marrow is found in the cavities of many bones. It manufactures and releases leukocytes and erythrocytes into the bloodstream.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0001160") AnnotationAssertion( "FMA:74595") AnnotationAssertion(Annotation( "BTO:0001160") Annotation( ) "medulla ossium rubra") AnnotationAssertion(Annotation( ) "parenchymal red marrow") AnnotationAssertion(Annotation( "BTO:0001160") "red marrow") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "parenchyma of none marrow marrow") AnnotationAssertion( "UBERON:0000361") AnnotationAssertion(rdfs:label "red bone marrow") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (renal medulla) AnnotationAssertion(Annotation( "ISBN:0-683-40008-8"^^xsd:string) Annotation( "MGI:smb"^^xsd:string) Annotation( "MP:0003014") "The inner portion of the kidney consisting of the renal pyramids.") AnnotationAssertion( "The renal medulla is split up into a number of sections, known as the renal pyramids. Blood enters into the kidney via the renal artery, which then splits up to form the arcuate arterioles. The arcuate arterioles each in turn branch into interlobular arterioles, which finally reach the glomeruli. At the glomerulus the blood reaches a highly disfavourable pressure gradient and a large exchange surface area, which forces the serum portion of the blood out of the vessel into the renal tubules. Flow continues through the renal tubules, including the proximal tubule, the Loop of Henle, and finally leaves the kidney by means of the collecting duct, leading to the renal ureter. The renal medulla contains the structures of the nephrons responsible for maintaining the salt and water balance of the blood. The renal medulla is hypertonic to the filtrate in the nephron and aids in the reabsorption of water") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0001167") AnnotationAssertion( "CALOHA:TS-1157") AnnotationAssertion( "EMAPA:19279") AnnotationAssertion( "GAID:425") AnnotationAssertion( "MA:0000373") AnnotationAssertion( "MESH:D007679") AnnotationAssertion( "NCIT:C12740") AnnotationAssertion(Annotation( "ncithesaurus:Renal_Medulla") "UMLS:C0022664") AnnotationAssertion( "galen:MedullaOfKidney") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "kidney medulla") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "medulla of kidney") AnnotationAssertion(Annotation( "FMA:74268") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "medulla renalis") AnnotationAssertion(Annotation( "FMA:74268") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "pyramides renales") AnnotationAssertion(Annotation( "FMA:86327") Annotation( ) "renal medullae") AnnotationAssertion(Annotation( "FMA:86327") Annotation( ) "renal medullae set") AnnotationAssertion(Annotation( "FMA:74268") Annotation( ) "renal pyramids") AnnotationAssertion(Annotation( "FMA:74268") Annotation( ) "renal pyramids set") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:74268") Annotation( ) "medullary pyramids") AnnotationAssertion(Annotation( "BTO:0001167") "renal marrow") AnnotationAssertion( "UBERON:0000362") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "renal medulla") AnnotationAssertion( "Illu:kidney.jpg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (reticuloendothelial system) AnnotationAssertion(Annotation( ) "A part of the immune system that consists of the phagocytic cells located in reticular connective tissue. The cells are primarily monocytes and macrophages, and they accumulate in lymph nodes and the spleen. The Kupffer cells of the liver and tissue histiocytes are also part of the RES[WP].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0001174") AnnotationAssertion( "EV:0100048") AnnotationAssertion( "FMA:84189") AnnotationAssertion( "GAID:1004") AnnotationAssertion( "MESH:D012157") AnnotationAssertion( "NCIT:C12780") AnnotationAssertion(Annotation( "ncithesaurus:Reticuloendothelial_System") "UMLS:C0035287") AnnotationAssertion(Annotation( ) "RES") AnnotationAssertion(Annotation( ) "lymphoreticular system") AnnotationAssertion(Annotation( "FMA:84189") "mononuclear phagocyte system") AnnotationAssertion(Annotation( "FMA:84189") "reticuloendothelial system") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BioMart:BioMart") "lymphoreticular") AnnotationAssertion( "UBERON:0000363") AnnotationAssertion(rdfs:label "reticuloendothelial system") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete rootlet) AnnotationAssertion( "FMA:76787") AnnotationAssertion( "BTO:0001192") AnnotationAssertion(Annotation( "FMA:76787") "Rootlets") AnnotationAssertion(Annotation( "FMA:76787") "Rootlets set") AnnotationAssertion(Annotation( "FMA:76787") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "fila radicularia") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0000364") AnnotationAssertion(rdfs:label "obsolete rootlet") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (urothelium) AnnotationAssertion(Annotation( ) Annotation( ) "An epithelial tissue layer that lines much of the urinary tract, including the renal pelvis, the ureters, the bladder, and parts of the urethra.") AnnotationAssertion( "urothelial") AnnotationAssertion(Annotation( ) "transitional epithelium") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0003906") AnnotationAssertion( "CALOHA:TS-1096") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37978") AnnotationAssertion( "FMA:63914") AnnotationAssertion( "FMA:67695") AnnotationAssertion( "GAID:935") AnnotationAssertion( "MESH:D019459") AnnotationAssertion( "NCIT:C12884") AnnotationAssertion( "NCIT:C13318") AnnotationAssertion(Annotation( "ncithesaurus:Transitional_Epithelium") "UMLS:C0225339") AnnotationAssertion(Annotation( "ncithesaurus:Urothelium") "UMLS:C0227598") AnnotationAssertion(Annotation( "FMA:63914") "epithelium transitionale") AnnotationAssertion(Annotation( ) Annotation( "FMA:63914") "transitional epithelium") AnnotationAssertion(Annotation( "FMA:67695") "uroepithelium") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0000365") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "urothelium") AnnotationAssertion( "Harnblase:Urothel.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (flexor muscle) AnnotationAssertion(Annotation( ) Annotation( ) "A skeletal muscle whose contraction bends a joint.") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0005271") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "A muscle that decreases the angle of a joint.[TAO]") AnnotationAssertion( ) AnnotationAssertion( "BTO:0001257") AnnotationAssertion( "FMA:74559") AnnotationAssertion( "FMA:74999") AnnotationAssertion( "TAO:0005271") AnnotationAssertion( "ZFA:0005271") AnnotationAssertion( "uberon") AnnotationAssertion( "flexor") AnnotationAssertion( "UBERON:0000366") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "flexor muscle") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (adductor brevis) AnnotationAssertion(Annotation( ) "The adductor brevis is a muscle in the thigh situated immediately behind the pectineus and adductor longus. It is somewhat triangular in form, and arises by a narrow origin from the outer surfaces of the superior and inferior rami of the pubis, between the gracilis and obturator externus. Its fibers, passing backward, lateralward, and downward, are inserted, by an aponeurosis, into the line leading from the lesser trochanter to the linea aspera and into the upper part of the linea aspera, immediately behind the pectineus and upper part of the adductor longus.[WP].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0001288") AnnotationAssertion( "EMAPA:36219") AnnotationAssertion( "FMA:22442") AnnotationAssertion( "OpenCyc:Mx4rv13lfJwpEbGdrcN5Y29ycA") AnnotationAssertion( "adductor brevis muscle") AnnotationAssertion(Annotation( "FMA:22442") "musculus adductos brevis") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0000368") AnnotationAssertion(rdfs:label "adductor brevis") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/e/e2/Anterior_Hip_Muscles_2.PNG"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "Wikipedia"^^xsd:string) ) SubClassOf(Annotation( "anterior surface of the inferior ramus and body of the pubis") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "the lesser trochanter and linea aspera of the femur") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (corpus striatum) AnnotationAssertion(Annotation( ) "The corpus striatum (striated body) is a compound structure consisting of the caudate nucleus and the lentiform nucleus, which consists of the putamen and the globus pallidus[WP].") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001175") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "DOI:10.1146/annurev.ne.04.030181.001505, ISBN:978-0030223693 Liem KF, Bemis WE, Walker WF, Grande L, Functional Anatomy of the Vertebrates: An Evolutionary Perspective (2001) p.487 Figure 14-10") "Thus, certain telencephalic characters - such as the presence of a pallium divided into lateral, dorsal, and medial formations and a subpallium divided into striatum and septum - appear to characterize all vertebrates. They are primitive characters and are homologous among all vertebrates.[well established][VHOG]") AnnotationAssertion( "The term has been used in a few different ways: * It is a pair of nuclear masses which form the basal ganglia, along with the subthalamic nucleus and the substantia nigra. * It may also refer to both the basal ganglia and internal capsule collectively.[2]") AnnotationAssertion( "UBERON:0010082") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:CSTR") AnnotationAssertion( "BTO:0001311") AnnotationAssertion( "CALOHA:TS-0183") AnnotationAssertion( "EFO:0000381") AnnotationAssertion( "EHDAA2:0000596") AnnotationAssertion( "EMAPA:17549") AnnotationAssertion( "EV:0100184") AnnotationAssertion( "FMA:77616") AnnotationAssertion( "GAID:667") AnnotationAssertion( "MESH:A08.186.211.730.885.105.487") AnnotationAssertion( "NCIT:C12448") AnnotationAssertion(Annotation( "ncithesaurus:Corpus_Striatum") "UMLS:C0010097") AnnotationAssertion( "VHOG:0001175") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0001311") "striate body") AnnotationAssertion(Annotation( "BTO:0001311") "striated body") AnnotationAssertion( "UBERON:0000369") AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "* According to the 1917 version of Gray's Anatomy, it is the combination of the lentiform nucleus (also known as the lenticular nucleus) and the caudate nucleus * According to BrainInfo it is a part of the basal ganglia comprising the globus pallidus and striatum") AnnotationAssertion(rdfs:label "corpus striatum") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/b/b3/Gray656.png"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "MA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (adductor magnus) AnnotationAssertion(Annotation( ) "An adductor muscle that attaches to the pelvic bone and the femur. In humans, the adductor magnus is a large triangular muscle, situated on the medial side of the thigh. The portion which arises from the ischiopubic ramus (a small part of the inferior ramus of the pubis, and the inferior ramus of the ischium) is called the 'adductor magnesius portion', and the portion arising from the tuberosity of the ischium is called the 'hamstring portion'. The hamstring portion is not considered part of the hamstring group of muscles, but it is adjacent to it.[WP,generalized].") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0010040") Annotation( "AAO"^^xsd:string) Annotation( "AAO:EJS"^^xsd:string) "Origin by two heads that are separated by a ventral tendon of the M. semitendinosus. One head originates from the ventral border of the pubic portion of the pelvic rim. The other head originates from the ischiatic border of the pelvic rim. The ventral head fuses with accessory head from the M. semitendinosus and inserts along the ventro-medial border of the femur. The dorsal belly merges with the ventral and accessory heads and inserts along the medial surface of the femur.[AAO]") AnnotationAssertion(Annotation( "AAO"^^xsd:string) "Definition generalized to accommodate AAO class - 'Origin by two heads that are separated by a ventral tendon of the M. semitendinosus. One head originates from the ventral border of the pubic portion of the pelvic rim. The other head originates from the ischiatic border of the pelvic rim. The ventral head fuses with accessory head from the M. semitendinosus and inserts along the ventro-medial border of the femur. The dorsal belly merges with the ventral and accessory heads and inserts along the medial surface of the femur.' [AAO:0010040]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010040") AnnotationAssertion( "BTO:0001312") AnnotationAssertion( "EMAPA:36221") AnnotationAssertion( "FMA:22443") AnnotationAssertion( "OpenCyc:Mx4rvuSd6JwpEbGdrcN5Y29ycA") AnnotationAssertion( "galen:AdductorMagnus") AnnotationAssertion( "adductor magnus muscle") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "musculus adductor magnus") AnnotationAssertion( "UBERON:0000370") AnnotationAssertion(rdfs:label "adductor magnus") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/e/e2/Anterior_Hip_Muscles_2.PNG"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "Wikipedia"^^xsd:string) ) SubClassOf(Annotation( "posterior branch of obturator nerve and sciatic nerve") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "tuberosity of the ischium") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (syncytiotrophoblast) AnnotationAssertion(Annotation( ) Annotation( ) "Extraembryonic cells of trophoblastic shell surrounding embryo, outside the cytotrophoblast layer, involved with implantation of the blastocyst by eroding extracellular matrix surrounding maternal endometrial cells at site of implantation, also contribute to villi. (dark staining, multinucleated).") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0001335") AnnotationAssertion( "EHDAA:129") AnnotationAssertion( "EHDAA:91") AnnotationAssertion( "EMAPA:16068") AnnotationAssertion( "FMA:83040") AnnotationAssertion( "NCIT:C33918") AnnotationAssertion(Annotation( "ncithesaurus:Syncytiotrophoblast") "UMLS:C1135936") AnnotationAssertion(Annotation( "FMA:83040") "syncytial trophoblast") AnnotationAssertion(Annotation( "ISBN:0073040584"^^xsd:string) "syntrophoblast layer") AnnotationAssertion( "uberon") AnnotationAssertion( "syncitiotrophoblast") AnnotationAssertion(Annotation( ) Annotation( ) "syncitiotrophoblastus") AnnotationAssertion( "syntrophoblast") AnnotationAssertion( "UBERON:0000371") AnnotationAssertion(rdfs:label "syncytiotrophoblast") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/d/df/Gray36.png"^^xsd:anyURI) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf(Annotation( "EMAPA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (extensor digitorum brevis pes) AnnotationAssertion(Annotation( ) "A muscle on the upper surface of the foot that helps extend digits 2 through 4.") AnnotationAssertion( ) AnnotationAssertion( "BTO:0001337") AnnotationAssertion( "EMAPA:36258") AnnotationAssertion( "FMA:51140") AnnotationAssertion(Annotation( "FMA:51140") "extensor digitorum brevis") AnnotationAssertion( "extensor digitorum brevis muscle") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "musculus extensor digitorum brevis") AnnotationAssertion( "UBERON:0000372") AnnotationAssertion(rdfs:label "extensor digitorum brevis pes") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/5/5f/Gray1241.png"^^xsd:anyURI) AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/8/8b/Gray441.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "dorsal surface of calcaneus") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "proximal dorsal region of middle phalanges 2 3 and 4") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (tapetum of corpus callosum) AnnotationAssertion(Annotation( ) "On either side of the corpus collosum, the fibers radiate in the white substance and pass to the various parts of the cerebral cortex; those curving forward from the genu into the frontal lobe constitute the forceps anterior, and those curving backward into the occipital lobe, the forceps posterior. Between these two parts is the main body of the fibers which constitute the tapetum and extend laterally on either side into the temporal lobe, and cover in the central part of the lateral ventricle. [Wikipedia via Greys].") AnnotationAssertion(Annotation( "BTO"^^xsd:string) "not to be confused with BTO:0001350 or GO:0048655-tapetal layer morphogenesis") AnnotationAssertion(Annotation( "FMA:77208") Annotation( ) "tapetum") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "DHBA:12027") AnnotationAssertion( "FMA:77208") AnnotationAssertion( "HBA:265504966") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "tapetum corporis callosi") AnnotationAssertion( "UBERON:0000373") AnnotationAssertion(rdfs:label "tapetum of corpus callosum") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/a/aa/Gray733.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (mandibular nerve) AnnotationAssertion(Annotation( ) Annotation( "MP:0009800") "The motor and sensory nerve subdivision of the trigeminal nerve that transmits sensory information from the auricle, the external acoustic meatus, tympanic membrane, temporal region, the cheek, the skin overlying the mandible, the anterior portion of the tongue, the floor of the mouth, lower teeth and gingiva and transmits motor information from the muscles of mastication, the mylohyoid muscle and digastric muscle and the muscles tensor tympani and tensor veli palatini.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010688") AnnotationAssertion( "AAO:0010703") AnnotationAssertion( "BTO:0001375") AnnotationAssertion( "EHDAA2:0002086") AnnotationAssertion( "EMAPA:17798") AnnotationAssertion( "FMA:52996") AnnotationAssertion( "GAID:834") AnnotationAssertion( "MA:0001101") AnnotationAssertion( "MESH:D008340") AnnotationAssertion( "NCIT:C32779") AnnotationAssertion( "OpenCyc:Mx4rvcQKSpwpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Inferior_Maxillary_Nerve") "UMLS:C0024695") AnnotationAssertion( "VHOG:0001345") AnnotationAssertion(Annotation( "FMA:52996") "inferior maxillary nerve") AnnotationAssertion(Annotation( "FMA:52996") "mandibular division [V3]") AnnotationAssertion(Annotation( "FMA:52996") "mandibular division [Vc]") AnnotationAssertion(Annotation( "FMA:52996") "mandibular division of fifth cranial nerve") AnnotationAssertion(Annotation( "FMA:52996") "mandibular division of trigeminal nerve [Vc; V3]") AnnotationAssertion(Annotation( "FMA:52996") "mandibular nerve [V3]") AnnotationAssertion(Annotation( "FMA:52996") "mandibular nerve [Vc]") AnnotationAssertion(Annotation( "FMA:52996") "nervus mandibularis [Vc; V3]") AnnotationAssertion(Annotation( "FMA:52996") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "nervus mandibularis [v3]") AnnotationAssertion(Annotation( "FMA:52996") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "nervus mandibularis [vc]") AnnotationAssertion(Annotation( "AAO:0010688") "ramus mandibularis (ramus V3)") AnnotationAssertion(Annotation( "FMA:52996") "third division of fifth cranial nerve") AnnotationAssertion(Annotation( "FMA:52996") "third division of trigeminal nerve") AnnotationAssertion(Annotation( "MA:0001101") "trigeminal V nerve mandibular division") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "n. mandibularis") AnnotationAssertion(Annotation( "BTO:0001375") "nervus mandibularis") AnnotationAssertion(Annotation( "EMAPA:17798") "trigeminal nerve mandibular division") AnnotationAssertion( "UBERON:0000375") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "mandibular nerve") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/4/4d/Gray781.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (hindlimb stylopod) AnnotationAssertion(Annotation( ) "The part of the hindlimb between pelvis and the knee, corresponding to the femur.") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000349") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0198540472 Janvier P, Early vertebrates (1996) p.268"^^xsd:string) "Most anatomists now agree that the three proximal bones of the tetrapod limbs are homologous to the two or three proximal elements of the paired fin skeleton of other sarcopterygians, that is the humerus-femur, radius-tibia, and ulna-fibula.[well established][VHOG]") AnnotationAssertion(Annotation( "https://github.com/obophenotype/uberon/issues/61") "Naming conventions for pod terms under discussion within phenoscape group.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0001376") AnnotationAssertion( "CALOHA:TS-2039") AnnotationAssertion( "EFO:0001943") AnnotationAssertion( "EHDAA2:0002130") AnnotationAssertion( "EHDAA:5171") AnnotationAssertion( "EHDAA:6200") AnnotationAssertion( "EMAPA:17499") AnnotationAssertion( "FMA:24967") AnnotationAssertion( "GAID:50") AnnotationAssertion( "MA:0000052") AnnotationAssertion( "MESH:D013848") AnnotationAssertion( "NCIT:C33763") AnnotationAssertion( "OpenCyc:Mx4rvVjN7JwpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Thigh") "UMLS:C0039866") AnnotationAssertion( "VHOG:0000349") AnnotationAssertion( "galen:Thigh") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "hind limb stylopod") AnnotationAssertion(Annotation( "VHOG:0000349") "hind limb stylopodium") AnnotationAssertion(Annotation( "AAO:0000887") "hind propodium") AnnotationAssertion(Annotation( "AAO:0000887") "hindlimb propodium") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "hindlimb stylopod") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "hindlimb stylopodium") AnnotationAssertion(Annotation( "FMA:24967") "proximal segment of free lower limb") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "stylopod of hind limb") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "stylopod of hindlimb") AnnotationAssertion( "stylopod of lower limb") AnnotationAssertion( "thigh") AnnotationAssertion(Annotation( "MA:0000052") Annotation( ) "upper leg") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "femur") AnnotationAssertion( "UBERON:0000376") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "hindlimb stylopod") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/4/4b/Gray1238.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "MA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (maxillary nerve) AnnotationAssertion(Annotation( ) Annotation( "MP:0009799") "The sensory nerve subdivision of the trigeminal nerve that transmits sensory information from the palate, upper teeth and gingiva, the skin between the palpebral fissure and the mouth, and from the nasal cavity and maxillary sinuses.") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0010670") Annotation( "AAO"^^xsd:string) Annotation( "AAO:EJS"^^xsd:string) "Medial ramus (sensory) of the trigeminal nerve.[AAO]") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0010670") Annotation( "AAO"^^xsd:string) "relationship loss: part_of trunk maxillary-mandibularis (AAO:0010669)[AAO]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010670") AnnotationAssertion( "BTO:0001378") AnnotationAssertion( "EHDAA2:0002087") AnnotationAssertion( "EMAPA:17799") AnnotationAssertion( "FMA:52724") AnnotationAssertion( "GAID:836") AnnotationAssertion( "MA:0001103") AnnotationAssertion( "MESH:D008442") AnnotationAssertion( "OpenCyc:Mx4rvWNU9JwpEbGdrcN5Y29ycA") AnnotationAssertion( "VHOG:0001346") AnnotationAssertion(Annotation( "FMA:52724") "maxillary division [V2]") AnnotationAssertion(Annotation( "FMA:52724") "maxillary division [Vb]") AnnotationAssertion(Annotation( "FMA:52724") "maxillary division of fifth cranial nerve") AnnotationAssertion(Annotation( "FMA:52724") "maxillary division of trigeminal nerve (Vb; V2)") AnnotationAssertion(Annotation( "FMA:52724") "maxillary nerve [V2]") AnnotationAssertion(Annotation( "FMA:52724") "maxillary nerve [Vb]") AnnotationAssertion(Annotation( "FMA:52724") "nervus maxillaris (Vb; V2)") AnnotationAssertion(Annotation( "FMA:52724") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "nervus maxillaris [v2]") AnnotationAssertion(Annotation( "FMA:52724") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "nervus maxillaris [vb]") AnnotationAssertion(Annotation( "AAO:0010670") "ramus maxillaris (ramus V2)") AnnotationAssertion(Annotation( "FMA:52724") "second division of fifth cranial nerve") AnnotationAssertion(Annotation( "FMA:52724") "second division of trigeminal nerve") AnnotationAssertion(Annotation( "MA:0001103") "trigeminal V nerve maxillary division") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "n. maxillaris") AnnotationAssertion(Annotation( "BTO:0001378") "nervus maxillaris") AnnotationAssertion(Annotation( "EMAPA:17799") "trigeminal nerve maxillary division") AnnotationAssertion( "UBERON:0000377") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "maxillary nerve") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/a/a9/Gray779.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (tongue muscle) AnnotationAssertion(Annotation( ) Annotation( "MP:0004136") "The muscular portion of the tongue.") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001390") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "DOI:10.1002/dvdy.20587 Kusakabe R, Kuratani S, Evolution and developmental patterning of the vertebrate skeletal muscles: perspectives from the lamprey. Developmental Dynamics (2005)") "The lamprey head contains another group of muscles, the epi- and hypo-branchial muscles (EBM and HBM), derivatives of anterior trunk myotomes. (...) The origin and the migration pattern of HBM precursors are very similar to that of the gnathostome MPP, especially to that of the tongue muscle precursors. Other evidence of homology of lamprey HBM to the gnathostome tongue muscle is that HBM is innervated by the nerve termed the hypoglossal nerve based on its morphological position associated with the head/trunk interface. (...) The HBM-specific expression of the LampPax3/7 gene is consistent with the homology of this muscle to the gnathostome tongue muscle, or to the hypobranchial series as a whole (including the infrahyoid and possibly the diaphragm in mammals).[well established][VHOG]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0001386") AnnotationAssertion( "EHDAA2:0002065") AnnotationAssertion( "EHDAA:9146") AnnotationAssertion( "EMAPA:17883") AnnotationAssertion( "FMA:46689") AnnotationAssertion( "MA:0001596") AnnotationAssertion( "NCIT:C49301") AnnotationAssertion( "NCIT:C52707") AnnotationAssertion(Annotation( "ncithesaurus:Tongue_Muscle") "UMLS:C0448325") AnnotationAssertion(Annotation( "ncithesaurus:Tongue_Skeletal_Muscle_Tissue") "UMLS:C1710437") AnnotationAssertion( "VHOG:0001390") AnnotationAssertion(Annotation( "FMA:46689") "muscle of tongue") AnnotationAssertion(Annotation( "OBOL:accepted"^^xsd:string) "muscle organ of tongue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "skeletal muscle tissue of tongue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "tongue skeletal muscle") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "tongue skeletal muscle tissue") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "musculi linguae") AnnotationAssertion( "UBERON:0000378") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "tongue muscle") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/c/c6/Gray1019.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FEED:rd") Annotation( "ISBN:1607950324") ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (tracheal mucosa) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A mucosa that is part of a respiratory airway.") AnnotationAssertion( ) AnnotationAssertion( "BTO:0001390") AnnotationAssertion( "FMA:7471") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of organ of trachea") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of organ of windpipe") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of trachea") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of windpipe") AnnotationAssertion(Annotation( "FMA:7471") "mucous membrane of trachea") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucous membrane of trachea") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucous membrane of windpipe") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "organ mucosa of trachea") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "organ mucosa of windpipe") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "trachea mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "trachea mucosa of organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "trachea mucous membrane") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "trachea organ mucosa") AnnotationAssertion(Annotation( "FMA:7471") "tracheal mucous membrane") AnnotationAssertion(Annotation( "FMA:7471") "tunica mucosa (tracheae)") AnnotationAssertion(Annotation( "FMA:7471") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "tunica mucosa tracheae") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "windpipe mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "windpipe mucosa of organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "windpipe mucous membrane") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "windpipe organ mucosa") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0000379") AnnotationAssertion(rdfs:label "tracheal mucosa") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete tuber) AnnotationAssertion( "EFO:0001015") AnnotationAssertion( "FMA:75430") AnnotationAssertion( "BTO:0001400") AnnotationAssertion( "OpenCyc:Mx4raeDj5Cw8QdiT7e8pb2JzAA") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0000380") AnnotationAssertion(rdfs:label "obsolete tuber") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (urinary bladder detrusor smooth muscle) AnnotationAssertion(Annotation( ) Annotation( "MP:0011774") "Bundles of smooth muscle fibers forming the muscular wall of the urinary bladder, which are arranged in a longitudinal and a circular layer and, on contraction, serve to expel urine[MP].") AnnotationAssertion(Annotation( ) Annotation( "ncithesaurus:Muscularis_Propria") "muscularis propria") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0001453") AnnotationAssertion( "EMAPA:28637") AnnotationAssertion( "FMA:68018") AnnotationAssertion( "MA:0001698") AnnotationAssertion( "NCIT:C62404") AnnotationAssertion(Annotation( "FMA:68018") "detrusor") AnnotationAssertion(Annotation( "BTO:0001453") "detrusor muscle") AnnotationAssertion(Annotation( "EMAPA:28637") "detrusor muscle of bladder") AnnotationAssertion( "detrusor smooth muscle") AnnotationAssertion(Annotation( ) "detrusor urinae muscle") AnnotationAssertion(Annotation( ) "muscularis propria of the urinary bladder") AnnotationAssertion(Annotation( "FMA:68018") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "musculus detrusor vesicae") AnnotationAssertion(Annotation( "MA:0001698") "urinary bladder detrusor muscle") AnnotationAssertion(Annotation( "MA:0001698") "urinary bladder detrussor smooth muscle") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "musculus detrusor vesicae urinariae") AnnotationAssertion( "UBERON:0000381") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "urinary bladder detrusor smooth muscle") AnnotationAssertion( "Illu:bladder.jpg"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "posterior surface of the body of the pubis") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (apocrine sweat gland) AnnotationAssertion(Annotation( ) "Apocrine sweat glands are sweat glands composed of a coiled secretory portion located at the junction of the dermis and subcutaneous fat, from which a straight portion inserts and secretes into the infundibular portion of the hair follicle. The ducts of apocrine glands open into the canals of hair follicles. The stimulus for the secretion of apocrine sweat glands is adrenaline, which is a hormone carried in the blood[WP].") AnnotationAssertion( "A note of confusion is the difference between apocrine secretion and apocrine sweat gland. Apocrine secretion refers to the apical loss of a cell's membrane to create cell blebs, thus creating a secretory product. Apocrine sweat gland refers to a structure, not a secretion process. Apocrine sweat glands actually use a merocrine type secretion, or that mediated by exocytosis of secretory granules. When 'apocrine gland' is used without the word sweat, it is often referring to the gland which uses merocrine secretion, and not the secretion method. The important difference in apocrine sweat gland structure is its larger lumen, compared to the more narrow lumen of the eccrine sweat gland.") AnnotationAssertion(Annotation( ) ) AnnotationAssertion( "In humans, apocrine sweat glands are found only in certain locations of the body: the axillae (armpits), the areola of the nipples, and the genitoanal region.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0001458") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37426") AnnotationAssertion( "FMA:59155") AnnotationAssertion( "MESH:D001050") AnnotationAssertion( "NCIT:C32132") AnnotationAssertion(Annotation( "ncithesaurus:Apocrine_Sweat_Gland") "UMLS:C0930083") AnnotationAssertion(Annotation( ) Annotation( ) "glandula sudorifera apocrina") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0000382") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "apocrine sweat gland") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf(Annotation( "The term apocrine sweat gland is a misnomer. While it was once thought that apocrine sweat glands were true apocrine glands, it is now known that they use merocrine excretion. However, they have retained the original name") Annotation( "Wikipedia"^^xsd:string) ) DisjointClasses( ) # Class: (musculature of body) AnnotationAssertion(Annotation( "VSAO:0000033") "The subdivision of the musculoskeletal system that consists of all the muscles of the body[VSAO, modified].") AnnotationAssertion( "consider whether this should be restricted to skeletal musculature. See https://github.com/obophenotype/uberon/issues/77") AnnotationAssertion( ) AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "VSAO:0000033") Annotation( "VSAO"^^xsd:string) Annotation( "VSAO:curator") "Anatomical system that consists of the muscles of the body.[VSAO]") AnnotationAssertion(Annotation( "MA"^^xsd:string) "we place the MA term musculature here, rather than under uberon:musculature, as this seems more appropriate given the structure of MA") AnnotationAssertion( "AAO:0000307") AnnotationAssertion( "BILA:0000088") AnnotationAssertion( "BTO:0001369") AnnotationAssertion( "BTO:0001485") AnnotationAssertion( "EFO:0000801") AnnotationAssertion( "EMAPA:35578") AnnotationAssertion( "FBbt:00005069") AnnotationAssertion( "FMA:72954") AnnotationAssertion( "MA:0002888") AnnotationAssertion( "MAT:0000025") AnnotationAssertion( "MIAA:0000025") AnnotationAssertion( "VSAO:0000033") AnnotationAssertion( "XAO:0004042") AnnotationAssertion( "muscle system") AnnotationAssertion( "muscle system of body") AnnotationAssertion(Annotation( "FMA:72954") "muscular system") AnnotationAssertion(Annotation( "BILA:0000088") "musculature system") AnnotationAssertion(Annotation( "FMA:72954") "set of all muscles") AnnotationAssertion(Annotation( "FMA:72954") "set of muscles of body") AnnotationAssertion(Annotation( "BTO:0001369") "vertebrate muscular system") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0001485") "muskelsystem") AnnotationAssertion( "UBERON:0000383") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "musculature of body") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete labial gland) AnnotationAssertion( "FMA:71613") AnnotationAssertion( "HAO:0000449") AnnotationAssertion( "BTO:0001548") AnnotationAssertion(Annotation( "FMA:71613") "Labial glands") AnnotationAssertion(Annotation( "FMA:71613") "Labial glands set") AnnotationAssertion(Annotation( "FMA:71613") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "glandulae labiales") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0000385") AnnotationAssertion(rdfs:comment "the label 'labial gland' refers to two distinct classes. From the BTO def: 1. One of the small tubular mucous and serous glands lying beneath the mucous membrane of the lips.n2. A salivary gland, or modification thereof, opening at the base of the labium in certain insects.") AnnotationAssertion(rdfs:label "obsolete labial gland") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (meniscus) AnnotationAssertion(Annotation( ) "Crescent-shaped fibrocartilaginous structure present in the knee, acromioclavicular, sternoclavicular, and temporomandibular joints[2] that, in contrast to articular disks, only partly divides a joint cavity.[3] A small meniscus also occurs in the radio-carpal joint.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0001592") AnnotationAssertion( "EV:0100145") AnnotationAssertion( "FMA:76690") AnnotationAssertion( "NCIT:C33096") AnnotationAssertion(Annotation( "ncithesaurus:Meniscus") "UMLS:C0224498") AnnotationAssertion( "galen:Meniscus") AnnotationAssertion(Annotation( "FMA:76690") "articular disc") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0000387") AnnotationAssertion(rdfs:label "meniscus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (epiglottis) AnnotationAssertion(Annotation( ) Annotation( ) Annotation( "MGI:llw2") Annotation( "MP:0010371") "A part of the pharynx that consists of a flap of elastic cartilage tissue plus a mucous membrane covering, attached to the entrance of the larynx. The epiglottis is found at the root of the tongue and folds back over the entrance to the larynx during swallowing, preventing inhalation of food or drink[MP,modified].") AnnotationAssertion( ) AnnotationAssertion( "epiglottal") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0001628") AnnotationAssertion( "EHDAA2:0004081") AnnotationAssertion( "EMAPA:18289") AnnotationAssertion( "FMA:55130") AnnotationAssertion( "GAID:111") AnnotationAssertion( "MESH:A02.165.507.411") AnnotationAssertion( "NCIT:C12709") AnnotationAssertion( "OpenCyc:Mx4rvVjxE5wpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Epiglottis") "UMLS:C0014540") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0000388") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "epiglottis") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/e/e2/Gray958.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (lens cortex) AnnotationAssertion(Annotation( ) "Tissue that surrounds the lens nucleus.") AnnotationAssertion( ) AnnotationAssertion( "BTO:0001632") AnnotationAssertion( "CALOHA:TS-0542") AnnotationAssertion( "FMA:58970") AnnotationAssertion( "MESH:A09.371.509.225") AnnotationAssertion(Annotation( "FMA:58970") "cortex of lens") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0000389") AnnotationAssertion(rdfs:label "lens cortex") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lens nucleus) AnnotationAssertion(Annotation( "BTO:0001633") "The core of the crystalline lens, surrounded by the cortex.") AnnotationAssertion( ) AnnotationAssertion( "BTO:0001633") AnnotationAssertion( "FMA:58971") AnnotationAssertion( "MESH:A09.371.509.670") AnnotationAssertion(Annotation( "FMA:58971") "nucleus of lens") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0000390") AnnotationAssertion(rdfs:label "lens nucleus") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (leptomeninx) AnnotationAssertion(Annotation( ) Annotation( ) "Pia mater or arachnoid mater.") AnnotationAssertion( "check relationship to secondary meninx") AnnotationAssertion(Annotation( "FMA"^^xsd:string) "in FMA/NIF this is a superclass of PM/AM - in BTO it is the mereological sum. We go with superclass here, as we are naming the class in the singular") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0001634") AnnotationAssertion( "CALOHA:TS-0546") AnnotationAssertion( "FMA:231515") AnnotationAssertion( "NCIT:C32979") AnnotationAssertion( "NLXANAT:090207") AnnotationAssertion(Annotation( "ncithesaurus:Leptomeninges") "UMLS:C0228126") AnnotationAssertion(Annotation( "NLXANAT:090207") Annotation( ) "leptomeninges") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:231515") "arachnoid mater and pia mater") AnnotationAssertion(Annotation( "BTO:0001634") "arachnoidea mater et pia mater") AnnotationAssertion(Annotation( "BTO:0001634") "pia-arachnoid") AnnotationAssertion(Annotation( "FMA:231515") "pia-arachnoid of neuraxis") AnnotationAssertion( "UBERON:0000391") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "leptomeninx") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (longissimus muscle) AnnotationAssertion(Annotation( ) "The longissimus is the muscle lateral to the semispinalis. It is the longest subdivision of the sacrospinalis that extends forward into the transverse processes of the posterior cervical vertebrae. [WP,unvetted].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0001648") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37648") AnnotationAssertion( "FMA:77178") AnnotationAssertion(Annotation( "FMA:77178") "longissimus") AnnotationAssertion(Annotation( ) Annotation( ) "musculus longissimus") AnnotationAssertion(Annotation( "BTO:0001648") "musculus longissimus") AnnotationAssertion( "uberon") AnnotationAssertion( "intermediate column of erector spinae") AnnotationAssertion( "UBERON:0000392") AnnotationAssertion(rdfs:label "longissimus muscle") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/1/1f/Longissimus.png"^^xsd:anyURI) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf(Annotation( "BTO"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (cochlear ganglion) AnnotationAssertion(Annotation( ) Annotation( "MP:0002855") "The group of nerve cell bodies that conveys auditory sensation from the organ of Corti to the hindbrain and resides on the cochlear part of the vestibulocochlear nerve (eighth cranial nerve)[MP]. distributed to the hair cells of the spiral organ. The cochlear fibers arise in bipolar cells in the spiral ganglion in the modiolus.") AnnotationAssertion( "in BTO this is part of the cochlear modiolus, but this leads to the CG being in both the nervous and skeletal systems") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:GcVIII") AnnotationAssertion( "BTO:0001688") AnnotationAssertion( "EHDAA2:0002198") AnnotationAssertion( "EMAPA:17572") AnnotationAssertion( "FMA:53445") AnnotationAssertion( "GAID:722") AnnotationAssertion( "MA:0001085") AnnotationAssertion( "MESH:D013136") AnnotationAssertion( "VHOG:0001183") AnnotationAssertion(Annotation( "FMA:53445") "Corti's ganglion") AnnotationAssertion(Annotation( ) "cochlear part of vestibulocochlear ganglion") AnnotationAssertion(Annotation( "FMA:53445") "ganglion of Corti") AnnotationAssertion(Annotation( "FMA:53445") "spiral ganglion") AnnotationAssertion(Annotation( "MA:0001085") "vestibulocochlear VIII ganglion cochlear component") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0001688") "ganglion cochlearis") AnnotationAssertion(Annotation( ) Annotation( ) "ganglion spirale") AnnotationAssertion(Annotation( "BTO:0001688") "ganglion spirale cochleae") AnnotationAssertion(Annotation( "BTO:0001688") "spiral ganglion of cochlea") AnnotationAssertion(Annotation( "EMAPA:17572") "vestibulocochlear ganglion cochlear component") AnnotationAssertion( "UBERON:0000395") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "cochlear ganglion") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/b/b1/Gray903.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "cell bodies") Annotation( "BTO-modified") Annotation( "Wikipedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (vallate papilla) AnnotationAssertion(Annotation( "MGI:smb"^^xsd:string) Annotation( "MP:0006258") "Any of the large papillae, which have multiple taste buds in the trough surrounding the papillae, located near the base and on the dorsal side of the tongue.") AnnotationAssertion(Annotation( "BTO:0001705, Wikipedia:Vallate_papilla") "Any one of the largest papilla of the tongue, 8 to 12 in number, arranged in the form of a V anterior to the sulcus terminalis of the tongu[BTO:0001705, Wikipedia:Vallate_papilla]e") AnnotationAssertion( "UBERON:0002927") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:4106_2") AnnotationAssertion( "BTO:0001705") AnnotationAssertion( "EMAPA:18271") AnnotationAssertion( "FMA:54822") AnnotationAssertion( "MA:0001594") AnnotationAssertion( "NCIT:C32322") AnnotationAssertion(Annotation( "BIRNLEX:4106_2") "UMLS:C0226965") AnnotationAssertion(Annotation( "BIRNLEX:4106_2") "UMLS:C1182961") AnnotationAssertion(Annotation( "ncithesaurus:Circumvallate_Papilla") "UMLS:C1182961") AnnotationAssertion(Annotation( "BIRNLEX:4106_2") "UMLS:C1267555") AnnotationAssertion(Annotation( "MA:0001594") "circumvallate papilla") AnnotationAssertion(Annotation( "FMA:54822") "circumvallate papilla of tongue") AnnotationAssertion(Annotation( "FMA:71449") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "papilla vallatae") AnnotationAssertion( "vallate papilla of tongue") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "circumvallate papillae") AnnotationAssertion( "UBERON:0000396") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "vallate papilla") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/6/6c/Gray1015.png"^^xsd:anyURI) SubClassOf( ) # Class: (colonic epithelium) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An epithelium that is part of a colon [Automatically generated definition].") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0005128") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "Intestinal epithelium which lines the lumen of the posterior intestine.[TAO]") AnnotationAssertion( ) AnnotationAssertion( "BTO:0001709") AnnotationAssertion( "CALOHA:TS-0163") AnnotationAssertion( "EMAPA:18941") AnnotationAssertion( "FMA:17302") AnnotationAssertion( "MA:0003195") AnnotationAssertion( "TAO:0005128") AnnotationAssertion( "ZFA:0005128") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "colon epithelial tissue") AnnotationAssertion(Annotation( "FMA:17302") "colon epithelium") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "colon epithelium") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelial tissue of colon") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelial tissue of large bowel") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelium of colon") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelium of large bowel") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "large bowel epithelial tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "large bowel epithelium") AnnotationAssertion(Annotation( "ZFA:0005128") "posterior intestine epithelium") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0000397") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "colonic epithelium") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (cartilage tissue of sternum) AnnotationAssertion(Annotation( ) "Any portion of cartilage tissue that is part of the sternum.") AnnotationAssertion( "FMA:32567") AnnotationAssertion(Annotation( "FMA:32567") "cartilage of sternum") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0000398") AnnotationAssertion(rdfs:comment "Examples: cartilage of manubrium, cartilage of xiphoid process") AnnotationAssertion(rdfs:label "cartilage tissue of sternum") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (jejunal mucosa) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A mucosa that is part of a jejunum [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( "BTO:0001742") AnnotationAssertion( "CALOHA:TS-0495") AnnotationAssertion( "EMAPA:27109") AnnotationAssertion( "FMA:14949") AnnotationAssertion( "MA:0003214") AnnotationAssertion(Annotation( "FMA:14949") "jejunal mucous membrane") AnnotationAssertion(Annotation( "FMA:14949") "jejunum mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "jejunum mucosa of organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "jejunum mucous membrane") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "jejunum organ mucosa") AnnotationAssertion(Annotation( "FMA:14949") "mucosa of jejunum") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of organ of jejunum") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucous membrane of jejunum") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "organ mucosa of jejunum") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0000399") AnnotationAssertion(rdfs:label "jejunal mucosa") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (jejunal epithelium) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An epithelium that is part of a jejunum.") AnnotationAssertion( ) AnnotationAssertion( "BTO:0001743") AnnotationAssertion( "CALOHA:TS-0494") AnnotationAssertion( "EMAPA:18668") AnnotationAssertion( "FMA:17232") AnnotationAssertion( "MA:0003215") AnnotationAssertion( "epithelium of jejunum") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0000400") AnnotationAssertion(rdfs:label "jejunal epithelium") SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (mandibular ramus) AnnotationAssertion(Annotation( "ISBN:0-683-40008-8"^^xsd:string) Annotation( "MP:0010150") "The upturned perpendicular extremity of the mandible.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0001751") AnnotationAssertion( "EMAPA:25100") AnnotationAssertion( "FMA:52828") AnnotationAssertion( "MA:0002815") AnnotationAssertion(Annotation( "MA:0002815") "mandible ramus") AnnotationAssertion(Annotation( "FMA:52828") "ramus of mandible") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "lower ramus") AnnotationAssertion(Annotation( ) Annotation( ) "rami mandibulae") AnnotationAssertion(Annotation( ) Annotation( ) "ramus mandibulae") AnnotationAssertion(Annotation( ) Annotation( ) "ramus mandibulae") AnnotationAssertion( "UBERON:0000401") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "mandibular ramus") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/6/64/Gray176.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (nasal vestibule) AnnotationAssertion(Annotation( ) "The nasal vestibule is the most anterior part of the nasal cavity. It's enclosed by the cartilages of nose and lined by the same epithelium of the skin. The other part of the nasal cavity, which is lined by the respiratory epithelium, is called nasal cavity proper. [WP,unvetted].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0001761") AnnotationAssertion( "CALOHA:TS-0660") AnnotationAssertion( "FMA:59644") AnnotationAssertion(Annotation( "FMA:59644") "vestibular part of nasal cavity") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0001761") "vestibulum nasale") AnnotationAssertion(Annotation( ) Annotation( ) "vestibulum nasi") AnnotationAssertion(Annotation( "BTO:0001761") "vestibulum nasi") AnnotationAssertion( "UBERON:0000402") AnnotationAssertion(rdfs:label "nasal vestibule") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/7/7c/Gray994.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (scalp) AnnotationAssertion(Annotation( "MESH:A01.456.810") "The outer covering of the calvaria. It is composed of several layers: SKIN; subcutaneous connective tissue; the occipitofrontal muscle which includes the tendonous galea aponeurotica; Loose connective tissue; and the pericranium (the PERIOSTEUM of the SKULL).") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0001809") AnnotationAssertion( "CALOHA:TS-0896") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37949") AnnotationAssertion( "FMA:46494") AnnotationAssertion( "GAID:80") AnnotationAssertion( "MESH:D012535") AnnotationAssertion( "NCIT:C89807") AnnotationAssertion( "OpenCyc:Mx4rwNtaz5wpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Scalp") "UMLS:C0036270") AnnotationAssertion( "galen:Scalp") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "scalpus") AnnotationAssertion( "UBERON:0000403") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "scalp") AnnotationAssertion( "Double:cowlick.jpg"^^xsd:anyURI) AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/5/55/Layers_of_the_scalp_and_meninges.png"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "BTO"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) # Class: (sympathetic trunk) AnnotationAssertion(Annotation( ) Annotation( ) "One of a a paired bundle of nerve fibers plus ganglia that run from the base of the skull to the coccyx.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010791") AnnotationAssertion( "BAMS:S") AnnotationAssertion( "BTO:0001834") AnnotationAssertion( "CALOHA:TS-2049") AnnotationAssertion( "EV:0100374") AnnotationAssertion( "FMA:6258") AnnotationAssertion( "XAO:0000211") AnnotationAssertion(Annotation( ) "gangliated cord") AnnotationAssertion(Annotation( "FMA:6258") "sympathetic chain") AnnotationAssertion(Annotation( ) "sympathetic ganglionic chain") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "truncus sympathicus") AnnotationAssertion( "UBERON:0000407") AnnotationAssertion(rdfs:label "sympathetic trunk") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/2/2d/Gray847.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA-abduced-lr"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (vertebral ganglion) AnnotationAssertion(Annotation( "BTO:0001835") "Any of a group of sympathetic ganglia which form two chains extending from the base of the skull to the coccyx along the sides of the spinal column.") AnnotationAssertion( ) AnnotationAssertion( "BTO:0001835") AnnotationAssertion( "FMA:6572") AnnotationAssertion(Annotation( "FMA:6572") "intermediate ganglion") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0000408") AnnotationAssertion(rdfs:label "vertebral ganglion") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (serous gland) AnnotationAssertion(Annotation( ) Annotation( ) "A gland in which the principal secretory cells are serous secreting cells.") AnnotationAssertion(Annotation( "MP:0008052") "glands that secrete watery albuminous material that often contains enzymes[MP:0008052].") AnnotationAssertion( ) AnnotationAssertion( "BTO:0001837") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37950") AnnotationAssertion( "FMA:62889") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0000409") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "serous gland") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/c/c0/Gray1021.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (bronchial mucosa) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A mucosa that is part of a bronchus [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( "BTO:0001846") AnnotationAssertion( "FMA:62652") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bronchi mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bronchi mucosa of organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bronchi mucous membrane") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bronchi organ mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bronchial trunk mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bronchial trunk mucosa of organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bronchial trunk mucous membrane") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bronchial trunk organ mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bronchus mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bronchus mucosa of organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bronchus mucous membrane") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bronchus organ mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of bronchi") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of bronchial trunk") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of bronchus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of organ of bronchi") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of organ of bronchial trunk") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of organ of bronchus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucous membrane of bronchi") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucous membrane of bronchial trunk") AnnotationAssertion(Annotation( "FMA:62652") "mucous membrane of bronchus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucous membrane of bronchus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "organ mucosa of bronchi") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "organ mucosa of bronchial trunk") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "organ mucosa of bronchus") AnnotationAssertion(Annotation( "FMA:62652") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "tunica mucosa bronchi") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0000410") AnnotationAssertion(rdfs:label "bronchial mucosa") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (visual cortex) AnnotationAssertion(Annotation( ) "The part of the cerebral cortex responsible for processing visual information.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:VIS") AnnotationAssertion( "BTO:0001857") AnnotationAssertion( "CALOHA:TS-1117") AnnotationAssertion( "EFO:0000916") AnnotationAssertion( "EMAPA:36446") AnnotationAssertion( "EV:0100171") AnnotationAssertion( "FMA:242644") AnnotationAssertion( "GAID:679") AnnotationAssertion( "MBA:669") AnnotationAssertion( "MESH:A08.186.211.730.885.213.571.735") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:242644") "higher-order visual cortex") AnnotationAssertion(Annotation( "BAMS:VIS") "visual areas") AnnotationAssertion( "UBERON:0000411") AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "The visual cortex is made up of Brodmann area 17 (the primary visual cortex), and Brodmann area 18 and Brodmann area 19, the extrastriate cortical areas.") AnnotationAssertion(rdfs:label "visual cortex") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/7/70/Brodmann_areas_17_18_19.png"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "cjm"^^xsd:string) ) SubClassOf(Annotation( "tgbugs") ObjectSomeValuesFrom( )) # Class: (dermal papilla) AnnotationAssertion(Annotation( ) "A mesodermal signaling center of the hair follicle consisting of closely packed specialized mesenchymal fibroblasts. Framed by the enlarged bulb matrix in anagen.") AnnotationAssertion( "consider adding grouping class for TAO:0001995 ! papilla") AnnotationAssertion( "In humans, at the surface of the skin in hands and feet, they appear as epidermal or papillary ridges (colloquially known as fingerprints)") AnnotationAssertion( "Blood vessels in the dermal papillae nourish all hair follicles and bring nutrients and oxygen to the lower layers of epidermal cells.") AnnotationAssertion(Annotation( "ncit"^^xsd:string) "ncit has 'hair papilla' as part of hypodermis") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0001858") AnnotationAssertion( "CALOHA:TS-0431") AnnotationAssertion( "EMAPA:36484") AnnotationAssertion( "FMA:70737") AnnotationAssertion( "NCIT:C32710") AnnotationAssertion( "NCIT:C83189") AnnotationAssertion(Annotation( "ncithesaurus:Dermal_Papilla") "UMLS:C0221931") AnnotationAssertion(Annotation( ) "dermal papillae") AnnotationAssertion(Annotation( "FMA:70737") "follicular papilla") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0001858") "dermal papilla cell") AnnotationAssertion(Annotation( "MP:0010687") "hair follicle dermal papilla") AnnotationAssertion( "hair papilla") AnnotationAssertion(Annotation( "BTO:0001858") "papilla corii") AnnotationAssertion(Annotation( "BTO:0001858") "papilla dermatis") AnnotationAssertion(Annotation( "BTO:0001858") "papilla dermis") AnnotationAssertion(Annotation( "BTO:0001858") "papilla of corium") AnnotationAssertion(Annotation( ) Annotation( ) "papillae dermis") AnnotationAssertion(Annotation( "BTO:0001858") "skin papilla") AnnotationAssertion( "UBERON:0000412") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "dermal papilla") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/3/34/Skin.jpg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (mucous gland) AnnotationAssertion(Annotation( ) Annotation( ) "A gland in which the principal secretory cells are mucus secreting cells.") AnnotationAssertion(Annotation( "NCBITaxon:8292") Annotation( "ISBN:0073040584"^^xsd:string) "In frogs and salamanders, this is the smaller of the two types of gland, the other being the granular (poison) gland. In these species the mucous gland is a cluster of cells that release secretion into a common duct[Kardong]") AnnotationAssertion( ) AnnotationAssertion( "AAO:0010601") AnnotationAssertion( "BTO:0001979") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37913") AnnotationAssertion( "FMA:62888") AnnotationAssertion(Annotation( ) Annotation( ) "glandula mucosa") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0001979") "muciparous gland") AnnotationAssertion( "mucous secreting gland") AnnotationAssertion( "mucus gland") AnnotationAssertion( "mucus-secreting gland") AnnotationAssertion( "UBERON:0000414") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "mucous gland") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/c/c0/Gray1021.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses( ) # Class: (artery wall) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An anatomical wall that is part of an artery [Automatically generated definition].") AnnotationAssertion( "BTO:0002009") AnnotationAssertion( "FMA:14155") AnnotationAssertion( "galen:ArterialWall") AnnotationAssertion(Annotation( "FMA:14155") "arterial wall") AnnotationAssertion(Annotation( "FMA:14155") "wall of artery") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0000415") AnnotationAssertion(rdfs:label "artery wall") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (subdural space) AnnotationAssertion(Annotation( ) Annotation( ) Annotation( "BTO:0002082") "A narrow fluid-containing space, often only a potential space, between the dura mater and the arachnoid.") AnnotationAssertion( "consider obsoleting - see PMID:8421539") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0002082") AnnotationAssertion( "FMA:83803") AnnotationAssertion( "GAID:692") AnnotationAssertion( "MESH:D013355") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "cavum subdurale") AnnotationAssertion(Annotation( "BTO:0002082") "cavum subdurale") AnnotationAssertion(Annotation( ) Annotation( ) "spatium subdurale") AnnotationAssertion(Annotation( "BTO:0002082") "spatium subdurale") AnnotationAssertion(Annotation( "BTO:0002082") "subdural cavity") AnnotationAssertion(Annotation( "BTO:0002082") "subdural cleavage") AnnotationAssertion(Annotation( "BTO:0002082") "subdural cleft") AnnotationAssertion( "UBERON:0000416") AnnotationAssertion(rdfs:label "subdural space") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/5/5f/Gray769-en.svg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete tubercle) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0000418") AnnotationAssertion(rdfs:label "obsolete tubercle") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (myoepithelium) AnnotationAssertion(Annotation( ) Annotation( "CL:0000185") "An epithelium consisting of myopethelial cells, which are contractile cells resembling smooth muscle cells that are present in glands, notably the mammary gland, and aid in secretion. This cell has long weaving dendritic processes containing myofilament[CL].") AnnotationAssertion( ) AnnotationAssertion( "BTO:0002308") AnnotationAssertion( "FMA:67805") AnnotationAssertion(Annotation( "FMA:67805") "myo-epithelium") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "myoepitheliocytus") AnnotationAssertion( "UBERON:0000420") AnnotationAssertion(rdfs:label "myoepithelium") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (eccrine sweat gland) AnnotationAssertion(Annotation( ) Annotation( ) "A merocrine, unbranched, unbranched, coiled, tubular gland sweat gland. In humans, distributed over almost all of the body surface, and promote cooling by evaporation of their secretion.") AnnotationAssertion( "in mice, found only on footpads; in humans, entire body including soles and palms") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0002323") AnnotationAssertion( "FMA:59154") AnnotationAssertion( "GAID:945") AnnotationAssertion( "MA:0003039") AnnotationAssertion( "MESH:D004439") AnnotationAssertion( "NCIT:C32490") AnnotationAssertion(Annotation( "ncithesaurus:Eccrine_Sweat_Gland") "UMLS:C0013492") AnnotationAssertion(Annotation( ) Annotation( ) "glandula sudorifera eccrina") AnnotationAssertion(Annotation( ) Annotation( ) "glandula sudorifera merocrina") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:59154") "eccrine gland") AnnotationAssertion( "merocrine sweat gland") AnnotationAssertion( "UBERON:0000423") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "eccrine sweat gland") SubClassOf( ) SubClassOf(Annotation( "MGI:anna") ) # Class: (gastric pit) AnnotationAssertion(Annotation( ) "Gastric pits are indentations in the stomach which denote entrances to the gastric glands. They are deeper in the pylorus than they are in the other parts of the stomach. The human stomach has several million of these pits.") AnnotationAssertion( "UBERON:0000425") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0002364") AnnotationAssertion( "FMA:62947") AnnotationAssertion( "NCIT:C32659") AnnotationAssertion(Annotation( "ncithesaurus:Gastric_Pit") "UMLS:C0227203") AnnotationAssertion(Annotation( "FMA:76583") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "foveolae gastricae") AnnotationAssertion(Annotation( "FMA:62947") "gastric foveola") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0002364") "foveola gastrica") AnnotationAssertion(Annotation( ) Annotation( ) "foveolae gastricae") AnnotationAssertion( "UBERON:0000424") AnnotationAssertion(rdfs:label "gastric pit") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/7/73/Illu_stomach_layers.jpg"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "BTO"^^xsd:string) ObjectSomeValuesFrom( )) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (extravillous trophoblast) AnnotationAssertion(Annotation( "BTO:0002366") "The outermost layer of trophoblast, produced by cytotrophoblast where there is direct contact with maternal decidua rather than blood. The EVT cells travel into the decidua, reacting with NK cells and invading maternal blood vessels feeding the placenta, softening the walls and replacing the lining with fetal tissue, a process called conversion.") AnnotationAssertion( "BTO:0002366") AnnotationAssertion( "FMA:86561") AnnotationAssertion(Annotation( "FMA:86561") "intermediate trophoblast") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0002366") "interstitial trophoblast") AnnotationAssertion( "UBERON:0000426") AnnotationAssertion(rdfs:label "extravillous trophoblast") SubClassOf( ) SubClassOf(Annotation( "BTO"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (obsolete cytotrophoblastic cell) AnnotationAssertion( "NCIT:C38575") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0000427") AnnotationAssertion(rdfs:label "obsolete cytotrophoblastic cell") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (prostate epithelium) AnnotationAssertion(Annotation( "MP:0001168") "The prostate epithelium.") AnnotationAssertion( "TODO - check 2 FMA IDs") AnnotationAssertion( "UBERON:0002452") AnnotationAssertion( ) AnnotationAssertion( "BTO:0002397") AnnotationAssertion( "CALOHA:TS-2065") AnnotationAssertion( "EMAPA:35711") AnnotationAssertion( "FMA:66812") AnnotationAssertion( "FMA:79643") AnnotationAssertion( "MA:0001737") AnnotationAssertion( "NCIT:C13103") AnnotationAssertion(Annotation( "ncithesaurus:Prostatic_Epithelium") "UMLS:C1179826") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelial tissue of prostate") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelial tissue of prostate gland") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelium of prostate") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelium of prostate gland") AnnotationAssertion(Annotation( "FMA:79643") "epithelium of prostatic gland") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "prostate epithelial tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "prostate gland epithelial tissue") AnnotationAssertion( "prostate gland epithelium") AnnotationAssertion(Annotation( "FMA:66812") "prostatic epithelium") AnnotationAssertion( "prostatic gland epithelium") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0000428") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "prostate epithelium") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (enteric plexus) AnnotationAssertion(Annotation( "BTO:0002437") "A plexus of autonomic nerve fibers within the wall of the digestive tube, and made up of the submucosal, myenteric, and subserosal plexuses; it contains visceral afferent fibers, sympathetic postganglionic fibers, parasympathetic preganglionic and postganglionic fibers, and parasympathetic postganglionic cell bodies.") AnnotationAssertion( "UBERON:0012372") AnnotationAssertion( "BTO:0002437") AnnotationAssertion( "EMAPA:35446") AnnotationAssertion( "FMA:77597") AnnotationAssertion( "MA:0001147") AnnotationAssertion(Annotation( "FMA:77597") "enteric nerve plexus") AnnotationAssertion(Annotation( "MA:0001147") "intrinsic nerve plexus") AnnotationAssertion(Annotation( "BTO:0002437") "plexus entericus") AnnotationAssertion(Annotation( "FMA:77597") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "plexus nervosus entericus") AnnotationAssertion(Annotation( "FMA:77597") "sympathetic enteric nerve plexus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0000429") AnnotationAssertion(rdfs:label "enteric plexus") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (ventral intermediate nucleus of thalamus) AnnotationAssertion(Annotation( "BTO:0002469") "A nucleus medially located within the ventral nuclei of the thalamus.") AnnotationAssertion( "BTO:0002469") AnnotationAssertion( "EV:0100208") AnnotationAssertion( "FMA:84347") AnnotationAssertion( "TAO:0000370") AnnotationAssertion( "ZFA:0000370") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "ZFA:0000370") Annotation( ) "intermediate thalamic nuclei") AnnotationAssertion(Annotation( "TAO:0000370") "intermediate thalamic nucleus") AnnotationAssertion(Annotation( "BTO:0002469") "nucleus ventralis intermedius thalami") AnnotationAssertion( "UBERON:0000430") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "ventral intermediate nucleus of thalamus") SubClassOf( ) # Class: (ventral medial complex of thalamus) AnnotationAssertion(Annotation( "BTO:0002470") "A group of nuclei located in the medial portion of the ventral thalamic nuclei.") AnnotationAssertion( "BTO:0002470") AnnotationAssertion( "FMA:77795") AnnotationAssertion(Annotation( "FMA:77795") "ventral medial complex of thalamus") AnnotationAssertion(Annotation( "FMA:77795") "ventral medial nuclei of thalamus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0002470") Annotation( ) "nuclei ventrales mediales thalami") AnnotationAssertion(Annotation( "FMA:77795") "set of ventral medial nuclei of thalamus") AnnotationAssertion( "UBERON:0000431") AnnotationAssertion(rdfs:label "ventral medial complex of thalamus") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf(Annotation( "BTO-modified") ObjectSomeValuesFrom( )) # Class: (endopeduncular nucleus) AnnotationAssertion(Annotation( "MESH:A08.186.211.730.385.800.240") "A portion of the nucleus of ansa lenticularis located medial to the posterior limb of the internal capsule, along the course of the ansa lenticularis and the inferior thalamic peduncle or as a separate nucleus within the internal capsule adjacent to the medial GLOBUS PALLIDUS (NeuroNames, http://rprcsgi.rprc. washington.edu/neuronames/ (September 28, 1998)). In non-primates, the entopeduncular nucleus is analogous to both the medial globus pallidus and the entopeduncular nucleus of human.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:EN") AnnotationAssertion( "BTO:0002475") AnnotationAssertion( "DHBA:13057") AnnotationAssertion( "FMA:77691") AnnotationAssertion( "MESH:A08.186.211.730.385.800.240") AnnotationAssertion( "uberon") AnnotationAssertion( "entopeduncular nucleus") AnnotationAssertion(Annotation( "BTO:0002475") "nucleus endopeduncularis") AnnotationAssertion( "nucleus entopeduncularis") AnnotationAssertion( "UBERON:0000432") AnnotationAssertion(rdfs:comment "The term entopeduncular nucleus in human neuroanatomy refers to a portion of the nucleus of the ansa lenticularis described variously as located medial to the posterior limb of the internal capsule ( Riley-1943 ), along the course of the ansa lenticularis and the inferior thalamic peduncle ( Crosby-1962 ), or as a separate nucleus within the internal capsule adjacent to the medial segment of the globus pallidus ( Nomina-1983 ).[NN]") AnnotationAssertion(rdfs:label "endopeduncular nucleus") SubClassOf( ) SubClassOf(Annotation( "NN") ObjectSomeValuesFrom( )) # Class: (posterior paraventricular nucleus of thalamus) AnnotationAssertion(Annotation( "BTO:0002456") "The posterior of the two nuclei paraventriculares thalami.") AnnotationAssertion( "BAMS:PARP") AnnotationAssertion( "BTO:0002456") AnnotationAssertion( "FMA:76961") AnnotationAssertion( "HBA:4536") AnnotationAssertion(Annotation( "FMA:76961") "dorsal paraventricular nucleus of thalamus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0002477") "caecal epithelium") AnnotationAssertion(Annotation( "BTO:0002456") "nucleus paraventricularis posterior thalami") AnnotationAssertion(Annotation( "BTO:0002477") "nucleus paraventricularis posterior thalami") AnnotationAssertion(Annotation( "BTO:0002456") "posterior paraventricular nuclei") AnnotationAssertion(Annotation( "BTO:0002456") "posterior paraventricular nucleus of thalamus") AnnotationAssertion(Annotation( "BAMS:PARP") "posterior paraventricular nucleus of the thalamus") AnnotationAssertion( "UBERON:0000433") AnnotationAssertion(rdfs:label "posterior paraventricular nucleus of thalamus") SubClassOf( ) DisjointClasses(Annotation( "lexical"^^xsd:string) ) # Class: (anterior paraventricular nucleus of thalamus) AnnotationAssertion(Annotation( "BTO:0002455") Annotation( "Dorlands_Medical_Dictionary:MerckSource") "The anterior of the two nuclei paraventriculares thalami.") AnnotationAssertion( ) AnnotationAssertion( "BAMS:PARA") AnnotationAssertion( "BAMS:PVa") AnnotationAssertion( "BTO:0002455") AnnotationAssertion( "DMBA:16400") AnnotationAssertion( "FMA:76962") AnnotationAssertion( "HBA:12906") AnnotationAssertion( "MBA:30") AnnotationAssertion(Annotation( "BTO:0002455") "anterior paraventricular nucleus") AnnotationAssertion(Annotation( "FMA:76962") "ventral paraventricular nucleus of thalamus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0002455") "anterior paraventricular nuclei") AnnotationAssertion(Annotation( "BTO:0002455") "anterior paraventricular nucleus of thalamus") AnnotationAssertion(Annotation( "BAMS:PARA") "anterior paraventricular nucleus of the thalamus") AnnotationAssertion(Annotation( "BAMS:PVa") "anterior periventricular nucleus of the hypothalamus") AnnotationAssertion(Annotation( "BTO:0002455") "nucleus paraventricularis anterior thalami") AnnotationAssertion(Annotation( "BTO:0002478") "nucleus paraventricularis anterior thalami") AnnotationAssertion(Annotation( "BAMS:PVa") "periventricular hypothalamic nucleus, anterior part") AnnotationAssertion( "UBERON:0000434") AnnotationAssertion(rdfs:label "anterior paraventricular nucleus of thalamus") SubClassOf( ) DisjointClasses(Annotation( "lexical"^^xsd:string) ) # Class: (lateral tuberal nucleus) AnnotationAssertion(Annotation( "BTO:0002481") "Nerve cell nuclei situated ventrally in the intermediate hypothalamic region, mainly in the lateral hypothalamic area.") AnnotationAssertion(Annotation( "BIRNLEX:1206") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "LTu") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:LTu") AnnotationAssertion( "BIRNLEX:1206") AnnotationAssertion( "BM:TU") AnnotationAssertion( "BTO:0002481") AnnotationAssertion( "DHBA:10493") AnnotationAssertion( "DMBA:16271") AnnotationAssertion( "EV:0100240") AnnotationAssertion( "FMA:62336") AnnotationAssertion( "HBA:12915") AnnotationAssertion( "MBA:614") AnnotationAssertion(Annotation( "BIRNLEX:1206") "UMLS:C0086527") AnnotationAssertion(Annotation( "BIRNLEX:1206") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=428") AnnotationAssertion(Annotation( "FMA:62336") "lateral tuberal hypothalamic nuclei") AnnotationAssertion(Annotation( "BIRNLEX:1206") "lateral tuberal nuclear complex") AnnotationAssertion(Annotation( "FMA:62336") "lateral tuberal nuclei") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0002481") "nuclei tuberales laterales") AnnotationAssertion(Annotation( "NeuroNames:428") Annotation( ) "nucleus tuberis") AnnotationAssertion(Annotation( "NeuroNames:428") Annotation( ) "nucleus tuberis hypothalami") AnnotationAssertion(Annotation( "NeuroNames:428") Annotation( ) "nucleus tuberis lateralis") AnnotationAssertion( "UBERON:0000435") AnnotationAssertion(rdfs:label "lateral tuberal nucleus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (arachnoid barrier layer) AnnotationAssertion(Annotation( "BTO:0002498") "The arachnoid barrier layer is a part of the arachnoid meningeal layer. It is formed by tight junctions between the endothelial cells of cerebral capillaries in the arachnoid mater.") AnnotationAssertion( "BTO:0002498") AnnotationAssertion( "FMA:231559") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0000437") AnnotationAssertion(rdfs:label "arachnoid barrier layer") SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ) SubClassOf(Annotation( "cjm"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (obsolete set of arachnoid trabecula) AnnotationAssertion( "FMA:77761") AnnotationAssertion(Annotation( "FMA:77761") "Arachnoid trabeculae set") AnnotationAssertion(Annotation( "FMA:77761") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "trabeculae arachnoideae") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0000438") AnnotationAssertion(rdfs:label "obsolete set of arachnoid trabecula") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (arachnoid trabecula) AnnotationAssertion(Annotation( ) "The arachnoid trabeculae are delicate strands of connective tissue that loosely connect the two innermost layers of the meninges -- the arachnoid mater and the pia mater. They are found within the subarachnoid space where cerebrospinal fluid is also found. Embryologically, the trabeculae are the remnants of the common precursor that forms both the arachnoid and pial layers of the meninges.") AnnotationAssertion( ) AnnotationAssertion( "BTO:0002500") AnnotationAssertion( "FMA:83979") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "arachnoid trabeculae") AnnotationAssertion(Annotation( ) "trabecula arachnoideum") AnnotationAssertion( "UBERON:0000439") AnnotationAssertion(rdfs:label "arachnoid trabecula") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (trabecula) AnnotationAssertion(Annotation( ) Annotation( "GO:0060343") "A small, often microscopic, tissue element in the form of a small beam, strut or rod, generally having a mechanical function, and usually but not necessarily composed of dense collagenous tissue. On histological section, a trabecula can look like a septum, but in three dimensions they are topologically distinct, with trabeculae being roughly rod or pillar-shaped and septa being sheet-like. Trabeculae are usually composed of dense fibrous tissue, i.e. mainly of collagen, and in most cases provide mechanical strengthening or stiffening to a soft solid organ, such as the spleen. They can be composed of other materials, such as bone or muscle[WP].") AnnotationAssertion( "trabecular") AnnotationAssertion( ) AnnotationAssertion( "BTO:0002501") AnnotationAssertion( "FMA:85273") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0000440") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "trabecula") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (right testicular vein) AnnotationAssertion(Annotation( "Dorlands_Medical_Dictionary:MerckSource") "A vein that drains the left pampiniform plexus and empties into the left renal vein.") AnnotationAssertion( ) AnnotationAssertion( "BTO:0002679") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37383") AnnotationAssertion( "FMA:14341") AnnotationAssertion( "MA:0002220") AnnotationAssertion( "NCIT:C52697") AnnotationAssertion(Annotation( "MA:0002220") "right spermatic vein") AnnotationAssertion(Annotation( "FMA:14341") "vena testicularis (adrenalis) dextra") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0002679") "vena testicularis dextra") AnnotationAssertion(Annotation( "BTO:0002680") "vena testicularis sinistra") AnnotationAssertion( "UBERON:0000442") AnnotationAssertion(rdfs:label "right testicular vein") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (left testicular vein) AnnotationAssertion(Annotation( "Dorlands_Medical_Dictionary:MerckSource") "A vein that drains the right pampiniform plexus and empties into the inferior vena cava.") AnnotationAssertion( ) AnnotationAssertion( "BTO:0002680") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37167") AnnotationAssertion( "FMA:14345") AnnotationAssertion( "MA:0002219") AnnotationAssertion( "NCIT:C52696") AnnotationAssertion(Annotation( "MA:0002219") "left spermatic vein") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0002679") "vena testicularis dextra") AnnotationAssertion(Annotation( "BTO:0002680") "vena testicularis sinistra") AnnotationAssertion( "UBERON:0000443") AnnotationAssertion(rdfs:label "left testicular vein") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lymphoid follicle) AnnotationAssertion( "introducing part_of to 'cortex of lymph node' as in issue 7 introduces equivalencies; the part_of has instead been added to 'lymph node follicle'") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0002684") AnnotationAssertion( "FMA:55222") AnnotationAssertion( "NCIT:C33040") AnnotationAssertion(Annotation( "ncithesaurus:Lymphoid_Follicle") "UMLS:C0229654") AnnotationAssertion(Annotation( "FMA:55222") "lymphoid nodule") AnnotationAssertion(Annotation( "FMA:55222") "nodular lymphoid tissue") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0002684") "folliculus lymphaticus") AnnotationAssertion(Annotation( "BTO:0002684") "lymphatic follicle") AnnotationAssertion(Annotation( "BTO:0002684") "lymphatic nodule") AnnotationAssertion(Annotation( "BTO:0002684") "nodulus lymphaticus") AnnotationAssertion(Annotation( "BTO:0002684") "nodulus lymphoideus") AnnotationAssertion( "UBERON:0000444") AnnotationAssertion(rdfs:label "lymphoid follicle") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (habenular trigone) AnnotationAssertion(Annotation( ) "The habenular trigone is a small depressed triangular area situated in front of the superior colliculus and on the lateral aspect of the posterior part of the taenia thalami. It contains a group of nerve cells termed the ganglion habenulC&. Fibers enter it from the stalk of the pineal body, and others, forming what is termed the habenular commissure, pass across the middle line to the corresponding ganglion of the opposite side. Most of its fibers are, however, directed downward and form a bundle, the fasciculus retroflexus of Meynert, which passes medial to the red nucleus, and, after decussating with the corresponding fasciculus of the opposite side, ends in the interpeduncular ganglion.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:hbt") AnnotationAssertion( "BTO:0002700") AnnotationAssertion( "FMA:74868") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0002700") "trigone of habenulae") AnnotationAssertion(Annotation( ) Annotation( ) "trigonum habenulae") AnnotationAssertion(Annotation( "BTO:0002700") "trigonum habenulae") AnnotationAssertion( "UBERON:0000445") AnnotationAssertion(rdfs:comment "superclass in BTO is thalamic nucleus, not present in most ontologies") AnnotationAssertion(rdfs:label "habenular trigone") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (septum of telencephalon) AnnotationAssertion(Annotation( "BIRNLEX:963") "Gray matter structure located on the midline of the forebrain consisting of the septum pellucidum (in some species) and the septal nuclei (Heimer, 1996).") AnnotationAssertion(Annotation( "FMA:61842") "Subdivision of the telencephalon on the midline between the lateral ventricles which contains the septum pellucidum and the septal nuclei[FMA][FMA:61842].") AnnotationAssertion(Annotation( ) Annotation( ) "Se") AnnotationAssertion(Annotation( "BIRNLEX:963") "septum") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:SA") AnnotationAssertion( "BAMS:SEP") AnnotationAssertion( "BAMS:Sep") AnnotationAssertion( "BAMS:Spt") AnnotationAssertion( "BIRNLEX:963") AnnotationAssertion( "BM:Tel-Spt") AnnotationAssertion( "BTO:0002705") AnnotationAssertion( "EMAPA:32837") AnnotationAssertion( "FMA:61842") AnnotationAssertion( "MA:0000924") AnnotationAssertion( "MESH:A08.186.211.577.750") AnnotationAssertion(Annotation( "BIRNLEX:963") "UMLS:C0752060") AnnotationAssertion(Annotation( "BIRNLEX:963") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=255") AnnotationAssertion(Annotation( "FMA:61842") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "area septalis") AnnotationAssertion(Annotation( "FMA:61842") "septal area") AnnotationAssertion(Annotation( "FMA:61842") "septum (NN)") AnnotationAssertion(Annotation( "FMA:61842") "telencephalon septum") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:255") Annotation( ) "massa praecommissuralis") AnnotationAssertion(Annotation( "BAMS:SEP") "septal region") AnnotationAssertion(Annotation( "NeuroNames:255") Annotation( ) "septum pellucidum (BNA,PNA)") AnnotationAssertion(Annotation( "NeuroNames:255") Annotation( ) "septum telencephali") AnnotationAssertion( "UBERON:0000446") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "septum of telencephalon") SubClassOf( ) # Class: (obsolete decidual cell) AnnotationAssertion( "CL:2000002") AnnotationAssertion( "BTO:0002770") AnnotationAssertion( "FMA:86480") AnnotationAssertion( "NCIT:C32429") AnnotationAssertion(Annotation( "ncithesaurus:Decidual_Cell") "UMLS:C1511740") AnnotationAssertion( "Wikipedia:Decidual_cells") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0000449") AnnotationAssertion(rdfs:label "obsolete decidual cell") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (corpus albicans) AnnotationAssertion(Annotation( "BTO:0002784") "White fibrous tissue that replaces the regressing corpus luteum in the human ovary in the latter half of pregnancy, or soon after ovulation when pregnancy does not supervene.") AnnotationAssertion( ) AnnotationAssertion( "BTO:0002784") AnnotationAssertion( "EMAPA:29888") AnnotationAssertion( "FMA:18620") AnnotationAssertion(Annotation( "FMA:18620") "corpus albicans of ovary") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0002784") "corpus fibrosum") AnnotationAssertion(Annotation( "BTO:0002784") "corpus mamillare") AnnotationAssertion(Annotation( "BTO:0002784") Annotation( ) "mamillary body") AnnotationAssertion(Annotation( "BTO:0002784") Annotation( ) "mammillary body") AnnotationAssertion( "UBERON:0000450") AnnotationAssertion(rdfs:label "corpus albicans") SubClassOf(Annotation( "BTO"^^xsd:string) ) # Class: (prefrontal cortex) AnnotationAssertion(Annotation( "NLXANAT:090801") "The anterior part of the frontal lobes of the brain, lying in front of the motor and premotor areas.nnThis brain region has been implicated in planning complex cognitive behaviors, personality expression, decision making and moderating correct social behavior. The basic activity of this brain region is considered to be orchestration of thoughts and actions in accordance with internal goals.nnThe most typical psychological term for functions carried out by the pre-frontal cortex area is executive function. Executive function relates to abilities to differentiate among conflicting thoughts, determine good and bad, better and best, same and different, future consequences of current activities, working toward a defined goal, prediction of outcomes, expectation based on actions, and social 'control' (the ability to suppress urges that, if not suppressed, could lead to socially-unacceptable outcomes).nnMany authors have indicated an integral link between a person's personality and the functions of the prefrontal cortex. - definition adapted from Wikipedia.") AnnotationAssertion( "TODO - check MA") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:FrA") AnnotationAssertion( "BTO:0002807") AnnotationAssertion( "DHBA:10172") AnnotationAssertion( "EFO:0001384") AnnotationAssertion( "EMAPA:35356") AnnotationAssertion( "FMA:224850") AnnotationAssertion( "GAID:676") AnnotationAssertion( "MA:0000906") AnnotationAssertion( "MESH:A08.186.211.730.885.213.270.700") AnnotationAssertion( "NLXANAT:090801") AnnotationAssertion(Annotation( "FMA:224850") "prefrontal association cortex") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "MA:0000906") Annotation( ) "frontal association cortex") AnnotationAssertion(Annotation( "BTO:0002807") "prefrontal association complex") AnnotationAssertion( "UBERON:0000451") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "prefrontal cortex") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/5/59/Gray726-Brodman-prefrontal.svg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (decidua basalis) AnnotationAssertion(Annotation( ) Annotation( "MP:0012529") "Area of uterine endometrium found between the implanted chorionic vesicle and the myometrium.") AnnotationAssertion( "As the embryo enlarges, the decidua capsularis becomes stretched and smooth. Eventually the decidua capsularis merges with the decidua parietalis, obliterating the uterine cavity") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0002819") AnnotationAssertion( "EFO:0001918") AnnotationAssertion( "EMAPA:35270") AnnotationAssertion( "FMA:86477") AnnotationAssertion( "MA:0002905") AnnotationAssertion( "NCIT:C32426") AnnotationAssertion(Annotation( "ncithesaurus:Decidua_Basalis") "UMLS:C0230965") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "MGI:anna"^^xsd:string) "basal decidua") AnnotationAssertion(Annotation( "BTO:0002819") "decidua serotina") AnnotationAssertion( "UBERON:0000453") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "decidua basalis") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (cerebral subcortex) AnnotationAssertion(Annotation( "ncithesaurus:Cerebral_Subcortex") "The layer located below the cerebral cortex that includes the forebrain, midbrain and hindbrain.") AnnotationAssertion( ) AnnotationAssertion( "BTO:0002858") AnnotationAssertion( "FMA:242188") AnnotationAssertion( "NCIT:C98712") AnnotationAssertion(Annotation( "ncithesaurus:Cerebral_Subcortex") "UMLS:C0815008") AnnotationAssertion(Annotation( "FMA:242188") "cerebral medulla") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0002858") "subcortex") AnnotationAssertion( "UBERON:0000454") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "cerebral subcortex") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (secretion of exocrine gland) AnnotationAssertion(Annotation( ) "A portion of organism substance that is produced by exocrine glands.") AnnotationAssertion(Annotation( "BTO"^^xsd:string) "BTO has two distunct classes, with exocrine glandular secretion a subtype of secretion - however, all examples in BTO directly under secretion appear to be exocrine gland secretions") AnnotationAssertion( "UBERON:0006540") AnnotationAssertion(Annotation( "FMA:9675") "secretion") AnnotationAssertion( ) AnnotationAssertion( "AEO:0001005") AnnotationAssertion( "BTO:0002977") AnnotationAssertion( "BTO:0002979") AnnotationAssertion( "EMAPA:36535") AnnotationAssertion( "FMA:9675") AnnotationAssertion( "MA:0002504") AnnotationAssertion( "MESH:D012634") AnnotationAssertion( "NCIT:C34062") AnnotationAssertion(Annotation( "ncithesaurus:Exocrine_Gland_Fluid_or_Secretion") "UMLS:C1516992") AnnotationAssertion( "galen:Secretion") AnnotationAssertion(Annotation( "MESH:D012634") "bodily secretion") AnnotationAssertion(Annotation( "MA:0002504") "exocrine gland fluid/secretion") AnnotationAssertion( "secreted substance") AnnotationAssertion( "uberon") AnnotationAssertion( "exocrine gland fluid") AnnotationAssertion( "exocrine gland fluid or secretion") AnnotationAssertion( "exocrine gland secretion") AnnotationAssertion(Annotation( "BTO:0002977") "external secretion") AnnotationAssertion( "UBERON:0000456") AnnotationAssertion(rdfs:label "secretion of exocrine gland") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (cavernous artery) AnnotationAssertion(Annotation( "BTO:0002996") "Any of several small branches of the internal carotid artery that supply the trigeminal ganglion and the walls of the cavernous and petrosal sinuses.") AnnotationAssertion( "BTO:0002996") AnnotationAssertion( "FMA:70527") AnnotationAssertion(Annotation( "FMA:70527") "cavernous branch of cavernous part of internal carotid artery") AnnotationAssertion(Annotation( "FMA:70527") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "ramus sinus cavernosi (pars cavernosa) (arteria carotis interna)") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0000457") AnnotationAssertion(rdfs:label "cavernous artery") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (endocervix) AnnotationAssertion(Annotation( "BTO:0003002") "The region of the opening of the uterine cervix into the uterine cavity.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0003002") AnnotationAssertion( "FMA:86485") AnnotationAssertion( "NCIT:C12309") AnnotationAssertion(Annotation( "ncithesaurus:Endocervix") "UMLS:C0227837") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0000458") AnnotationAssertion(rdfs:label "endocervix") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (uterine wall) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An anatomical wall that is part of a uterus [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( "BTO:0003083") AnnotationAssertion( "FMA:17560") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "anatomical wall of uterus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "uterus anatomical wall") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "uterus wall") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "wall of uterus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0000459") AnnotationAssertion(rdfs:label "uterine wall") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (major vestibular gland) AnnotationAssertion(Annotation( "MGI:anna"^^xsd:string) Annotation( "MP:0011787") "The paired glands located slightly posterior and to the left and right of the opening of the vagina in the superficial perineal pouch in females; they secrete mucus to lubricate the vagina and are homologous to bulbourethral (Cowper's) glands in males.") AnnotationAssertion( "resolve difference in WP vs MP, superficial vs deep perineal pouch") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0003115") AnnotationAssertion( "EMAPA:36429") AnnotationAssertion( "FMA:9598") AnnotationAssertion( "GAID:384") AnnotationAssertion( "MA:0002936") AnnotationAssertion( "MESH:D001472") AnnotationAssertion( "NCIT:C12675") AnnotationAssertion( "Bartholin gland") AnnotationAssertion(Annotation( "FMA:9598") "Bartholin's gland") AnnotationAssertion(Annotation( "FMA:9598") "Tiedemann's gland") AnnotationAssertion(Annotation( "FMA:9598") "vulvovaginal gland") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:9598") "Duverney's gland") AnnotationAssertion(Annotation( "BTO:0003115") "glandula vestibularis major") AnnotationAssertion(Annotation( "MA:0002936") "greater vestibular gland") AnnotationAssertion(Annotation( ) "greater vestibular glands of Bartholin") AnnotationAssertion( "UBERON:0000460") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "major vestibular gland") SubClassOf(Annotation( "MP"^^xsd:string) ) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "FMA-abduced-lr"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "Wikipedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "Wikipedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (minor vestibular gland) AnnotationAssertion(Annotation( "BTO:0003116") "Small mucous glands opening upon the vestibular mucous membrane between the urethral and the vaginal orifice.") AnnotationAssertion( "compare with Skene's gland") AnnotationAssertion( "check and part_of relationships to mammalian vulva / urethra") AnnotationAssertion( ) AnnotationAssertion( "BTO:0003116") AnnotationAssertion( "FMA:20019") AnnotationAssertion( "NCIT:C61122") AnnotationAssertion(Annotation( "FMA:20019") "glandula vestibular minor") AnnotationAssertion(Annotation( "FMA:20019") "lesser vestibular gland") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0003116") "Guerin's gland") AnnotationAssertion( "Guérin's gland") AnnotationAssertion(Annotation( "BTO:0003116") "Schueller's gland") AnnotationAssertion(Annotation( ) "Skene gland") AnnotationAssertion(Annotation( "BTO:0003116") Annotation( ) "Skene's gland") AnnotationAssertion(Annotation( "BTO:0003116") "glandula vestibulares minor") AnnotationAssertion(Annotation( "BTO:0003116") "paraurethral gland") AnnotationAssertion(Annotation( "BTO:0003116") "periurethral gland") AnnotationAssertion(Annotation( "BTO:0003116") "urethral gland of female urethra") AnnotationAssertion( "UBERON:0000461") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "minor vestibular gland") SubClassOf(Annotation( "ncithesaurus"^^xsd:string) ) SubClassOf( ) SubClassOf( ) # Class: (obsolete villus) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0000462") AnnotationAssertion(rdfs:label "obsolete villus") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (organism substance) AnnotationAssertion(Annotation( ) "Material anatomical entity in a gaseous, liquid, semisolid or solid state; produced by anatomical structures or derived from inhaled and ingested substances that have been modified by anatomical structures as they pass through the body.") AnnotationAssertion( "AAO:0010839") AnnotationAssertion( "AEO:0000004") AnnotationAssertion( "BILA:0000004") AnnotationAssertion( "CALOHA:TS-2101") AnnotationAssertion( "CARO:0000004") AnnotationAssertion( "EHDAA2:0003004") AnnotationAssertion( "EMAPA:35178") AnnotationAssertion( "FBbt:00007019") AnnotationAssertion( "FMA:9669") AnnotationAssertion( "HAO:0000004") AnnotationAssertion( "MA:0002450") AnnotationAssertion( "NCIT:C13236") AnnotationAssertion( "SPD:0000008") AnnotationAssertion( "TAO:0001487") AnnotationAssertion( "TGMA:0001824") AnnotationAssertion( "VHOG:0001726") AnnotationAssertion( "XAO:0004001") AnnotationAssertion( "ZFA:0001487") AnnotationAssertion( "galen:BodySubstance") AnnotationAssertion(Annotation( "MA:0002450") "body fluid or substance") AnnotationAssertion(Annotation( "FMA:9669") "body substance") AnnotationAssertion(Annotation( "CARO:0000004") "organism substance") AnnotationAssertion(Annotation( "FMA:9669") "portion of body substance") AnnotationAssertion(Annotation( "ZFA:0001487") "portion of organism substance") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0000463") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "organism substance") SubClassOf( ) SubClassOf(Annotation( "this relationship may be too strong and may be weakened in future") ObjectSomeValuesFrom( )) # Class: (anatomical space) AnnotationAssertion(Annotation( ) "Non-material anatomical entity of three dimensions, that is generated by morphogenetic or other physiologic processes; is surrounded by one or more anatomical structures; contains one or more organism substances or anatomical structures.") AnnotationAssertion( "lumen") AnnotationAssertion( "space") AnnotationAssertion( ) AnnotationAssertion( "AAO:0010110") AnnotationAssertion( "AEO:0000005") AnnotationAssertion( "BILA:0000005") AnnotationAssertion( "CARO:0000005") AnnotationAssertion( "EHDAA2:0003005") AnnotationAssertion( "FBbt:00007017") AnnotationAssertion( "FMA:5897") AnnotationAssertion( "HAO:0000005") AnnotationAssertion( "NCIT:C94478") AnnotationAssertion( "TAO:0001668") AnnotationAssertion( "TGMA:0001825") AnnotationAssertion(Annotation( "ncithesaurus:Lumen_Space") "UMLS:C0524461") AnnotationAssertion( "VHOG:0001728") AnnotationAssertion( "XAO:0003190") AnnotationAssertion( "ZFA:0001643") AnnotationAssertion( "lumen space") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "ZFA:0001643") Annotation( ) "anatomical spaces") AnnotationAssertion( "UBERON:0000464") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "anatomical space") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses( ) # Class: (material anatomical entity) AnnotationAssertion(Annotation( ) "Anatomical entity that has mass.") AnnotationAssertion( "AAO:0010264") AnnotationAssertion( "AEO:0000006") AnnotationAssertion( "BILA:0000006") AnnotationAssertion( "CARO:0000006") AnnotationAssertion( "EHDAA2:0003006") AnnotationAssertion( "FBbt:00007016") AnnotationAssertion( "FMA:67165") AnnotationAssertion( "HAO:0000006") AnnotationAssertion( "TAO:0001836") AnnotationAssertion( "TGMA:0001826") AnnotationAssertion( "VHOG:0001721") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0000465") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "material anatomical entity") SubClassOf( ) # Class: (immaterial anatomical entity) AnnotationAssertion(Annotation( ) "Anatomical entity that has no mass.") AnnotationAssertion( "AAO:0010265") AnnotationAssertion( "AEO:0000007") AnnotationAssertion( "BILA:0000007") AnnotationAssertion( "CARO:0000007") AnnotationAssertion( "EHDAA2:0003007") AnnotationAssertion( "FBbt:00007015") AnnotationAssertion( "FMA:67112") AnnotationAssertion( "HAO:0000007") AnnotationAssertion( "TAO:0001835") AnnotationAssertion( "TGMA:0001827") AnnotationAssertion( "VHOG:0001727") AnnotationAssertion(Annotation( "FMA:67112") "immaterial physical anatomical entity") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0000466") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "immaterial anatomical entity") SubClassOf( ) # Class: (anatomical system) AnnotationAssertion(Annotation( "CARO:0000011") "Multicellular, connected anatomical structure that has multiple organs as parts and whose parts work together to achieve some shared function.") AnnotationAssertion(Annotation( "GO:0048731") "system") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0000007") AnnotationAssertion( "AEO:0000011") AnnotationAssertion( "BILA:0000011") AnnotationAssertion( "BIRNLEX:14") AnnotationAssertion( "BSA:0000049") AnnotationAssertion( "CALOHA:TS-2088") AnnotationAssertion( "CARO:0000011") AnnotationAssertion( "EHDAA2:0003011") AnnotationAssertion( "EHDAA:392") AnnotationAssertion( "EMAPA:16103") AnnotationAssertion( "EV:0100000") AnnotationAssertion( "FBbt:00004856") AnnotationAssertion( "FMA:7149") AnnotationAssertion( "HAO:0000011") AnnotationAssertion( "MA:0000003") AnnotationAssertion( "NCIT:C12919") AnnotationAssertion( "OpenCyc:Mx4rCWM0QCtDEdyAAADggVbxzQ") AnnotationAssertion( "TAO:0001439") AnnotationAssertion( "TGMA:0001831") AnnotationAssertion(Annotation( "ncithesaurus:Organ_System") "UMLS:C0460002") AnnotationAssertion( "VHOG:0001725") AnnotationAssertion( "WBbt:0005746") AnnotationAssertion( "WBbt:0005763") AnnotationAssertion( "XAO:0003002") AnnotationAssertion( "ZFA:0001439") AnnotationAssertion( "galen:AnatomicalSystem") AnnotationAssertion(Annotation( "BIRNLEX:14") "body system") AnnotationAssertion(Annotation( "CARO:0000011") "connected anatomical system") AnnotationAssertion( "organ system") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "ZFA:0001439") Annotation( ) "anatomical systems") AnnotationAssertion( "UBERON:0000467") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "anatomical system") AnnotationAssertion(rdfs:seeAlso ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (multicellular organism) AnnotationAssertion(Annotation( ) Annotation( ) Annotation( "CARO:0000012") "Anatomical structure that is an individual member of a species and consists of more than one cell.") AnnotationAssertion( "TODO - split body and mc organism? body continues after death stage") AnnotationAssertion( "organismal") AnnotationAssertion(Annotation( "FBbt:00000001") Annotation( "VHOG:0000671") Annotation( "WBbt:0007833") "organism") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010026") AnnotationAssertion( "AEO:0000191") AnnotationAssertion( "BILA:0000012") AnnotationAssertion( "BIRNLEX:18") AnnotationAssertion( "BSA:0000038") AnnotationAssertion( "BTO:0000042") AnnotationAssertion( "CARO:0000012") AnnotationAssertion( "EFO:0002906") AnnotationAssertion( "EHDAA2:0003103") AnnotationAssertion( "EHDAA2:0003191") AnnotationAssertion( "EHDAA:1") AnnotationAssertion( "EMAPA:25765") AnnotationAssertion( "EV:0100016") AnnotationAssertion( "FBbt:00000001") AnnotationAssertion( "FMA:256135") AnnotationAssertion( "HAO:0000012") AnnotationAssertion( "NCIT:C13041") AnnotationAssertion( "TADS:0000001") AnnotationAssertion( "TAO:0001094") AnnotationAssertion( "TGMA:0001832") AnnotationAssertion( "VHOG:0000671") AnnotationAssertion( "WBbt:0007833") AnnotationAssertion( "XAO:0003004") AnnotationAssertion( "ZFA:0001094") AnnotationAssertion( "galen:Organism") AnnotationAssertion( "ncithesaurus:Whole_Organism") AnnotationAssertion(Annotation( "CARO:0000012") "multi-cellular organism") AnnotationAssertion(Annotation( "BTO:0000042") "animal") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0001489") "Koerper") AnnotationAssertion(Annotation( "AEO:0000103") Annotation( "BIRNLEX:18") Annotation( "FMA:256135") Annotation( "NCIT:C13041") "body") AnnotationAssertion(Annotation( "BTO:0001489") "whole body") AnnotationAssertion(Annotation( "FBbt:00000001") "whole organism") AnnotationAssertion( "UBERON:0000468") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "multicellular organism") SubClassOf( ) # Class: (obsolete cell part) AnnotationAssertion(Annotation( ) "Anatomical structure that is a direct part of the cell.") AnnotationAssertion( "TODO - move metadata to GO and obsolete this class once homes have been found for existing children. Note the inconsistency between the usage of the label 'cell component' in GO and CARO") AnnotationAssertion( "AAO:0010271") AnnotationAssertion( "BILA:0000014") AnnotationAssertion( "CARO:0000014") AnnotationAssertion( "FBbt:00007012") AnnotationAssertion( "FMA:86454") AnnotationAssertion( "GO:0044464") AnnotationAssertion( "HAO:0000014") AnnotationAssertion( "NCIT:C34070") AnnotationAssertion( "NIF_Subcellular:sao-1337158144") AnnotationAssertion( "OpenCyc:Mx4rwQwkcZwpEbGdrcN5Y29ycA") AnnotationAssertion( "TGMA:0001834") AnnotationAssertion(Annotation( "ncithesaurus:Cell_Part") "UMLS:C1178969") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "CARO:0000014") "cell component") AnnotationAssertion( "UBERON:0000470") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "obsolete cell part") AnnotationAssertion(rdfs:seeAlso "https://github.com/obophenotype/uberon/issues/489"^^xsd:anyURI) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (compound organ component) AnnotationAssertion(Annotation( ) Annotation( "CARO:0000019") "Multi-tissue structure that is part of a compound organ.") AnnotationAssertion( "this class was introduced for consistency with CARO, however, it has yet to be used in this or other ontologies. It may be retired in the future") AnnotationAssertion( "AAO:0010017") AnnotationAssertion( "AEO:0000019") AnnotationAssertion( "BILA:0000019") AnnotationAssertion( "CARO:0000019") AnnotationAssertion( "EHDAA2:0003019") AnnotationAssertion( "HAO:0000019") AnnotationAssertion( "TAO:0001489") AnnotationAssertion( "TGMA:0001835") AnnotationAssertion( "XAO:0003039") AnnotationAssertion( "ZFA:0001489") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "ZFA:0001489") Annotation( ) "compound organ components") AnnotationAssertion( "UBERON:0000471") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "compound organ component") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (simple organ) AnnotationAssertion(Annotation( ) Annotation( "CARO:0000021") "Multi-tissue structure that is not part of a compound organ.") AnnotationAssertion( "this class was introduced for consistency with CARO, however, it has yet to be used in this or other ontologies. It may be retired in the future") AnnotationAssertion( "AAO:0010051") AnnotationAssertion( "AEO:0000190") AnnotationAssertion( "BILA:0000021") AnnotationAssertion( "CARO:0000021") AnnotationAssertion( "EHDAA2:0003190") AnnotationAssertion( "HAO:0000021") AnnotationAssertion( "TAO:0001492") AnnotationAssertion( "TGMA:0001836") AnnotationAssertion( "XAO:0003038") AnnotationAssertion( "ZFA:0001492") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "ZFA:0001492") Annotation( ) "simple organs") AnnotationAssertion( "UBERON:0000472") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "simple organ") SubClassOf( ) # Class: (testis) AnnotationAssertion(Annotation( ) "A gonad of a male animal. A gonad produces and releases sperm.") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0000598") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "Male reproductive organ.[TAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000252") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "DOI:10.1093/icb/icm052 Extavour CGM, Gray anatomy: phylogenetic patterns of somatic gonad structures and reproductive strategies across the Bilateria. Integrative and Comparative Biology (2007), DOI:10.1146/annurev.cellbio.042308.13350 DeFalco T and Capel B, Gonad morphogenesis in vertebrates: divergent means to a convergent end. Annual review of cell and developmental biology (2009)") "(...) while it is likely that Urbilateria lacked a complex somatic reproductive system, it is at present impossible to speculate on whether or not it possessed a true gonad, let alone any other somatic adaptations for reproduction (reference 1); Examination of different vertebrate species shows that the adult gonad is remarkably similar in its morphology across different phylogenetic classes. Surprisingly, however, the cellular and molecular programs employed to create similar organs are not evolutionarily conserved (reference 2).[uncertain][VHOG]") AnnotationAssertion( "testicular") AnnotationAssertion(Annotation( "ISBN:0123971756") Annotation( "NCBITaxon:40674") "The testes are descended in metatherian and eutherian mammals, first transabdominally, then inguinoscrotally") AnnotationAssertion( "UBERON:0002117") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0000606") AnnotationAssertion( "BILA:0000124") AnnotationAssertion( "BSA:0000085") AnnotationAssertion( "BTO:0001363") AnnotationAssertion( "CALOHA:TS-1030") AnnotationAssertion( "EFO:0000984") AnnotationAssertion( "EHDAA2:0002007") AnnotationAssertion( "EHDAA:8146") AnnotationAssertion( "EMAPA:17972") AnnotationAssertion( "EV:0100102") AnnotationAssertion( "FBbt:00004928") AnnotationAssertion( "FMA:7210") AnnotationAssertion( "GAID:396") AnnotationAssertion( "HAO:0001007") AnnotationAssertion( "MA:0000411") AnnotationAssertion( "MAT:0000132") AnnotationAssertion( "MESH:D013737") AnnotationAssertion( "MIAA:0000132") AnnotationAssertion( "NCIT:C12412") AnnotationAssertion( "OpenCyc:Mx4rvVjM25wpEbGdrcN5Y29ycA") AnnotationAssertion( "TAO:0000598") AnnotationAssertion(Annotation( "ncithesaurus:Testis") "UMLS:C0039597") AnnotationAssertion( "VHOG:0000252") AnnotationAssertion( "WBbt:0006794") AnnotationAssertion( "XAO:0000157") AnnotationAssertion( "ZFA:0000598") AnnotationAssertion( "galen:Testis") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "gonad of male genitalia") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "gonad of male reproductive system") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "male gonad") AnnotationAssertion(Annotation( "FMA:7210") "testicle") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0001363") "orchis") AnnotationAssertion(Annotation( ) "testes") AnnotationAssertion(Annotation( "BTO:0001363") Annotation( ) "testiculus") AnnotationAssertion( "UBERON:0000473") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "testis") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/c/c3/Gray1144.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses( ) DisjointClasses( ) # Class: (female reproductive system) AnnotationAssertion(Annotation( ) Annotation( ) Annotation( "MP:0001119") "The organs and associated structures associated with bearing offspring in a female animal.") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000726") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0792383369 Lombardi J, Comparative vertebrate reproduction (1998) p.43") "By far, sexual reproduction is the more common pattern among living vertebrate forms and its widespread occurrence suggests that it is the plesiomorphic, or primitive, reproductive mode among the vertebrates.[well established][VHOG]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0000083") AnnotationAssertion( "CALOHA:TS-1303") AnnotationAssertion( "EFO:0000969") AnnotationAssertion( "EHDAA2:0000506") AnnotationAssertion( "EHDAA:8116") AnnotationAssertion( "EMAPA:17959") AnnotationAssertion( "EV:0100110") AnnotationAssertion( "FBbt:00004864") AnnotationAssertion( "FMA:45663") AnnotationAssertion( "GAID:364") AnnotationAssertion( "HAO:0000324") AnnotationAssertion( "MA:0000381") AnnotationAssertion( "MESH:D005836") AnnotationAssertion( "MIAA:0000028") AnnotationAssertion( "NCIT:C12402") AnnotationAssertion( "OpenCyc:Mx4rvVipTZwpEbGdrcN5Y29ycA") AnnotationAssertion( "TGMA:0000635") AnnotationAssertion(Annotation( "ncithesaurus:Female_Reproductive_System") "UMLS:C0700038") AnnotationAssertion( "VHOG:0000726") AnnotationAssertion( "WikipediaCategory:Female_reproductive_system") AnnotationAssertion( "XAO:0000156") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "female organism genitalia") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "female organism reproductive system") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "genitalia of female organism") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "reproductive system of female organism") AnnotationAssertion( "uberon") AnnotationAssertion( "female genital system") AnnotationAssertion( "female genital tract") AnnotationAssertion( "female genitalia") AnnotationAssertion(Annotation( "XAO:0000156") Annotation( ) "female genitals") AnnotationAssertion(Annotation( "MA:0000381") "female reproductive tract") AnnotationAssertion(Annotation( "BTO:0000083") "gynaecological tissue") AnnotationAssertion(Annotation( "BTO:0000083") "systema genitale femininum") AnnotationAssertion( "UBERON:0000474") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "female reproductive system") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/6/68/Scheme_female_reproductive_system-en.svg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (organism subdivision) AnnotationAssertion(Annotation( ) Annotation( "CARO:0000032") Annotation( "CARO:DOS") "Anatomical structure which is a subdivision of a whole organism, consisting of components of multiple anatomical systems, largely surrounded by a contiguous region of integument.") AnnotationAssertion( "Reflects CARO2. todo - check the inclusion of FMA 'cardinal body part here', and check child terms for consistency") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010053") AnnotationAssertion( "AEO:0000032") AnnotationAssertion( "BILA:0000032") AnnotationAssertion( "BIRNLEX:7") AnnotationAssertion( "CALOHA:TS-2084") AnnotationAssertion( "CARO:0000032") AnnotationAssertion( "EFO:0000808") AnnotationAssertion( "EHDAA2:0003032") AnnotationAssertion( "EMAPA:36031") AnnotationAssertion( "FBbt:00007009") AnnotationAssertion( "FMA:7153") AnnotationAssertion( "HAO:0000032") AnnotationAssertion( "MA:0002433") AnnotationAssertion( "MAT:0000293") AnnotationAssertion( "MESH:D001829") AnnotationAssertion( "MIAA:0000293") AnnotationAssertion( "NCIT:C32221") AnnotationAssertion( "OpenCyc:Mx4rvViAHJwpEbGdrcN5Y29ycA") AnnotationAssertion( "TAO:0001308") AnnotationAssertion( "TGMA:0001840") AnnotationAssertion(Annotation( "ncithesaurus:Body_Part") "UMLS:C0229962") AnnotationAssertion( "VHOG:0001758") AnnotationAssertion( "XAO:0003013") AnnotationAssertion( "ZFA:0001308") AnnotationAssertion( "galen:BodyPart") AnnotationAssertion(Annotation( "MA:0002433") "anatomic region") AnnotationAssertion( "uberon") AnnotationAssertion( "body part") AnnotationAssertion(Annotation( "FMA:7153") "body region") AnnotationAssertion(Annotation( "FMA:7153") "cardinal body part") AnnotationAssertion( "UBERON:0000475") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "organism subdivision") SubClassOf(Annotation( "CARO"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) # Class: (acellular anatomical structure) AnnotationAssertion(Annotation( ) "Anatomical structure that consists of cell parts and cell substances and together does not constitute a cell or a tissue.") AnnotationAssertion( "AAO:0010268") AnnotationAssertion( "AEO:0000040") AnnotationAssertion( "BILA:0000040") AnnotationAssertion( "CARO:0000040") AnnotationAssertion( "EHDAA2:0003040") AnnotationAssertion( "FBbt:00007013") AnnotationAssertion( "FMA:63863") AnnotationAssertion( "HAO:0000040") AnnotationAssertion( "TAO:0000382") AnnotationAssertion( "TGMA:0001841") AnnotationAssertion( "XAO:0003162") AnnotationAssertion( "ZFA:0000382") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "ZFA:0000382") Annotation( ) "acellular anatomical structures") AnnotationAssertion( "UBERON:0000476") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "acellular anatomical structure") SubClassOf( ) DisjointClasses(Annotation( "CARO"^^xsd:string) ) # Class: (anatomical cluster) AnnotationAssertion(Annotation( ) "Anatomical group that has its parts adjacent to one another.") AnnotationAssertion( "Will be obsoleted in CARO v2 [https://github.com/obophenotype/caro/issues/3]") AnnotationAssertion( "AAO:0010009") AnnotationAssertion( "AEO:0000041") AnnotationAssertion( "BILA:0000041") AnnotationAssertion( "CARO:0000041") AnnotationAssertion( "EHDAA2:0003041") AnnotationAssertion( "FBbt:00007277") AnnotationAssertion( "FMA:49443") AnnotationAssertion( "HAO:0000041") AnnotationAssertion( "TADS:0000605") AnnotationAssertion( "TAO:0001478") AnnotationAssertion( "TGMA:0001842") AnnotationAssertion( "VHOG:0001737") AnnotationAssertion( "XAO:0003160") AnnotationAssertion( "ZFA:0001478") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0000477") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "anatomical cluster") SubClassOf( ) # Class: (extraembryonic structure) AnnotationAssertion(Annotation( ) Annotation( ) Annotation( "CARO:DOS") "A multicellular anatomical structure that is associated with an embryo and derived from the zygote from which it develops, but which does not contribute to the embryo proper or to structures that are part of the same organism after embryogenesis.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010020") AnnotationAssertion( "AEO:0000042") AnnotationAssertion( "BILA:0000042") AnnotationAssertion( "CALOHA:TS-2119") AnnotationAssertion( "CARO:0000042") AnnotationAssertion( "EHDAA2:0003042") AnnotationAssertion( "EHDAA:46") AnnotationAssertion( "FBbt:00005835") AnnotationAssertion( "FMA:85537") AnnotationAssertion( "HAO:0000042") AnnotationAssertion( "NCIT:C34055") AnnotationAssertion( "TAO:0000020") AnnotationAssertion( "TGMA:0001843") AnnotationAssertion(Annotation( "ncithesaurus:Extraembryonic_Structure") "UMLS:C1282438") AnnotationAssertion( "VHOG:0000292") AnnotationAssertion( "XAO:0004005") AnnotationAssertion( "ZFA:0000020") AnnotationAssertion( "extra-embryonic structure") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "ZFA:0000020") Annotation( ) "extraembryonic structures") AnnotationAssertion( "extraembryonic tissue") AnnotationAssertion( "UBERON:0000478") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "see also conceptus extraembryonic component in EHDAA2.") AnnotationAssertion(rdfs:label "extraembryonic structure") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (tissue) AnnotationAssertion(Annotation( "CARO:0000043") "Multicellular anatomical structure that consists of many cells of one or a few types, arranged in an extracellular matrix such that their long-range organisation is at least partly a repetition of their short-range organisation.") AnnotationAssertion( "changed label and definition to reflect CARO2") AnnotationAssertion( ) AnnotationAssertion( "AAO:0000607") AnnotationAssertion( "AAO:0010054") AnnotationAssertion( "AEO:0000043") AnnotationAssertion( "BILA:0000043") AnnotationAssertion( "BIRNLEX:19") AnnotationAssertion( "CALOHA:TS-2090") AnnotationAssertion( "CARO:0000043") AnnotationAssertion( "EHDAA2:0003043") AnnotationAssertion( "EMAPA:35868") AnnotationAssertion( "FBbt:00007003") AnnotationAssertion( "FMA:9637") AnnotationAssertion( "HAO:0000043") AnnotationAssertion( "MA:0003002") AnnotationAssertion( "MESH:D014024") AnnotationAssertion( "NCIT:C12801") AnnotationAssertion( "TAO:0001477") AnnotationAssertion( "TGMA:0001844") AnnotationAssertion(Annotation( "ncithesaurus:Tissue") "UMLS:C0040300") AnnotationAssertion( "VHOG:0001757") AnnotationAssertion( "WBbt:0005729") AnnotationAssertion( "XAO:0003040") AnnotationAssertion( "ZFA:0001477") AnnotationAssertion( "galen:Tissue") AnnotationAssertion(Annotation( "CARO:0000043") "portion of tissue") AnnotationAssertion( "tissue portion") AnnotationAssertion(Annotation( "AEO:0000043") "simple tissue") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0000479") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "tissue") SubClassOf(Annotation( "CARO"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (anatomical group) AnnotationAssertion(Annotation( ) Annotation( "CARO:0000054") "Anatomical structure consisting of at least two non-overlapping organs, multi-tissue aggregates or portion of tissues or cells of different types that does not constitute an organism, organ, multi-tissue aggregate, or portion of tissue.") AnnotationAssertion( "Obsoleted in v2 of CARO [https://github.com/obophenotype/caro/issues/2]") AnnotationAssertion( "AAO:0010008") AnnotationAssertion( "AEO:0000054") AnnotationAssertion( "BILA:0000054") AnnotationAssertion( "CARO:0000054") AnnotationAssertion( "EHDAA2:0003054") AnnotationAssertion( "FBbt:00007276") AnnotationAssertion( "HAO:0000054") AnnotationAssertion( "TAO:0001512") AnnotationAssertion( "TGMA:0001846") AnnotationAssertion( "VHOG:0001724") AnnotationAssertion( "XAO:0003001") AnnotationAssertion( "ZFA:0001512") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0000480") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "anatomical group") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (multi-tissue structure) AnnotationAssertion(Annotation( ) Annotation( "CARO:0000055") "Anatomical structure that has as its parts two or more portions of tissue of at least two different types and which through specific morphogenetic processes forms a single distinct structural unit demarcated by bona-fide boundaries from other distinct structural units of different types.") AnnotationAssertion( "AAO:0010048") AnnotationAssertion( "AEO:0000055") AnnotationAssertion( "BILA:0000055") AnnotationAssertion( "CARO:0000055") AnnotationAssertion( "EHDAA2:0003055") AnnotationAssertion( "FBbt:00007010") AnnotationAssertion( "HAO:0000055") AnnotationAssertion( "TAO:0001488") AnnotationAssertion( "TGMA:0001847") AnnotationAssertion( "VHOG:0001762") AnnotationAssertion( "XAO:0003037") AnnotationAssertion( "ZFA:0001488") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "ZFA:0001488") Annotation( ) "multi-tissue structures") AnnotationAssertion( "UBERON:0000481") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "multi-tissue structure") SubClassOf(Annotation( "CARO"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (basal lamina of epithelium) AnnotationAssertion(Annotation( ) "Acellular anatomical structure that consists of a thin sheet of fibrous proteins that underlie and support the cells of an epithelium. It separates the cells of an epithelium from any underlying tissue.") AnnotationAssertion( "this class represents a continuous sheet of basal lamina which can underlie multiple epithelial cells over large regions. In contrast, the GO class 'basal lamina' represents a portion of substance on the scale of a single cell.") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001592") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0198566694 Schmidt-Rhaesa A, The evolution of organ systems (2007) p.57") "A basal lamina is certainly present in Bilateria and was evaluated as an autapomorphy of this taxon.[well established][VHOG]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010269") AnnotationAssertion( "AEO:0000065") AnnotationAssertion( "BILA:0000065") AnnotationAssertion( "CARO:0000065") AnnotationAssertion( "EHDAA2:0003065") AnnotationAssertion( "FMA:62918") AnnotationAssertion( "HAO:0000065") AnnotationAssertion( "MESH:D001485") AnnotationAssertion( "NCIT:C32186") AnnotationAssertion( "NIF_Subcellular:sao1397492660") AnnotationAssertion( "TAO:0001485") AnnotationAssertion( "TGMA:0001850") AnnotationAssertion(Annotation( "ncithesaurus:Basal_Lamina") "UMLS:C0085872") AnnotationAssertion( "VHOG:0001592") AnnotationAssertion( "WBbt:0005756") AnnotationAssertion( "XAO:0003163") AnnotationAssertion( "ZFA:0001485") AnnotationAssertion(Annotation( "FMA:62918") "basal lamina of connective tissue") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "CARO:0000065") "basal lamina") AnnotationAssertion(Annotation( "VHOG:0001592") Annotation( ) "basal laminae") AnnotationAssertion(Annotation( ) Annotation( ) "lamina basalis") AnnotationAssertion( "UBERON:0000482") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "basal lamina of epithelium") AnnotationAssertion( "Basal:lamina.jpg"^^xsd:anyURI) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (epithelium) AnnotationAssertion(Annotation( ) Annotation( ) "Portion of tissue, that consists of one or more layers of epithelial cells connected to each other by cell junctions and which is underlain by a basal lamina. Examples: simple squamous epithelium, glandular cuboidal epithelium, transitional epithelium, myoepithelium[CARO].") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000387") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0030259821 Ruppert EE, Fox RS, Barnes RD, Invertebrate zoology: a functional evolutionary approach (2003) p.59") "The two basic types of metazoan tissue are epithelial and connective. The simplest metazoans, and developmental stages of many primitive invertebrates, consist solely of these two layers. Thus, epithelial and connective tissues may be the primary (original) tissues of metazoans, and both are important in the functional organization of animals.[well established][VHOG]") AnnotationAssertion( "epithelial") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0000144") AnnotationAssertion( "AAO:0010055") AnnotationAssertion( "AEO:0000066") AnnotationAssertion( "BILA:0000066") AnnotationAssertion( "BTO:0000416") AnnotationAssertion( "CALOHA:TS-0288") AnnotationAssertion( "CARO:0000066") AnnotationAssertion( "EHDAA2:0003066") AnnotationAssertion( "EMAPA:32738") AnnotationAssertion( "FBbt:00007005") AnnotationAssertion( "FMA:9639") AnnotationAssertion( "GAID:402") AnnotationAssertion( "HAO:0000066") AnnotationAssertion( "MA:0003060") AnnotationAssertion( "MESH:D004848") AnnotationAssertion( "NCIT:C12710") AnnotationAssertion( "TAO:0001486") AnnotationAssertion(Annotation( "ncithesaurus:Epithelium") "UMLS:C0014609") AnnotationAssertion( "VHOG:0000387") AnnotationAssertion( "XAO:0003045") AnnotationAssertion( "ZFA:0001486") AnnotationAssertion( "epithelial tissue") AnnotationAssertion(Annotation( "FMA:9639") "portion of epithelium") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0000483") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "Editor note: surface epithelium may contain non-epithelial cells, such as melanocytes, lymphocytes and dendritic cells, within the sheet of epithelial cells. Do we consider these part of the epithelium, or located-in it?") AnnotationAssertion(rdfs:label "epithelium") AnnotationAssertion( "Tkanka:nablonkowa.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (simple cuboidal epithelium) AnnotationAssertion(Annotation( ) Annotation( ) "Unilaminar epithelium that consists of a single layer of cuboidal cells.") AnnotationAssertion( "needs to be synchronized with CL - there is no distinct cuboidal cell in CL") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010064") AnnotationAssertion( "AEO:0000067") AnnotationAssertion( "BILA:0000067") AnnotationAssertion( "CARO:0000067") AnnotationAssertion( "EHDAA2:0003067") AnnotationAssertion( "FMA:45566") AnnotationAssertion( "HAO:0000067") AnnotationAssertion( "NCIT:C33553") AnnotationAssertion( "TAO:0001497") AnnotationAssertion(Annotation( "ncithesaurus:Simple_Cuboidal_Epithelium") "UMLS:C0836134") AnnotationAssertion( "XAO:0004009") AnnotationAssertion( "ZFA:0001497") AnnotationAssertion( "epithelium simplex cuboideum") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "ZFA:0001497") Annotation( ) "simple cuboidal epithelia") AnnotationAssertion( "UBERON:0000484") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "simple cuboidal epithelium") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/d/d0/Gray1133.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) # Class: (simple columnar epithelium) AnnotationAssertion(Annotation( ) Annotation( ) Annotation( "FMA:FMA"^^xsd:string) "Unilaminar epithelium, which consists of a single layer of columnar cells. Examples: ciliated columnar epithelium, gastric epithelium, microvillus columnar epithelium.[FMA].") AnnotationAssertion(Annotation( "EHDAA2:0003068") "columnar epithelium") AnnotationAssertion(Annotation( "AEO:0000068") "columnar epithlium") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010063") AnnotationAssertion( "AEO:0000068") AnnotationAssertion( "BILA:0000068") AnnotationAssertion( "CARO:0000068") AnnotationAssertion( "EHDAA2_RETIRED:0003068") AnnotationAssertion( "FBbt:00007027") AnnotationAssertion( "FMA:45567") AnnotationAssertion( "HAO:0000068") AnnotationAssertion( "NCIT:C33552") AnnotationAssertion( "TAO:0001496") AnnotationAssertion(Annotation( "ncithesaurus:Simple_Columnar_Epithelium") "UMLS:C0836135") AnnotationAssertion( "XAO:0004008") AnnotationAssertion( "ZFA:0001496") AnnotationAssertion( "epithelium simplex columnare") AnnotationAssertion( "simple columnar epithelium") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "ZFA:0001496") Annotation( ) "simple columnar epithelia") AnnotationAssertion( "UBERON:0000485") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "simple columnar epithelium") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/8/8b/Gray1059.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) # Class: (multilaminar epithelium) AnnotationAssertion(Annotation( ) Annotation( ) Annotation( "FMA:FMA"^^xsd:string) "Epithelium which consists of more than one layer of epithelial cells that may or may not be in contact with a basement membrane. Examples: keratinized stratified squamous epithelium, ciliated stratified columnar epithelium.[FMA].") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "CARO:0000069") Annotation( "CARO") Annotation( ) Annotation( "FMA:45562") "Epithelium that consists of more than one layer of epithelial cells.[CARO]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010059") AnnotationAssertion( "AEO:0000069") AnnotationAssertion( "BILA:0000069") AnnotationAssertion( "BTO:0002074") AnnotationAssertion( "CARO:0000069") AnnotationAssertion( "EHDAA2:0003069") AnnotationAssertion( "FMA:45562") AnnotationAssertion( "HAO:0000069") AnnotationAssertion( "NCIT:C33622") AnnotationAssertion( "TAO:0001494") AnnotationAssertion(Annotation( "ncithesaurus:Stratified_Epithelium") "UMLS:C0682575") AnnotationAssertion( "XAO:0004006") AnnotationAssertion( "ZFA:0001494") AnnotationAssertion( "stratified epithelium") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0002074") "laminated epithelium") AnnotationAssertion( "UBERON:0000486") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "multilaminar epithelium") SubClassOf( ) # Class: (simple squamous epithelium) AnnotationAssertion(Annotation( ) Annotation( ) Annotation( "FMA:45565") "Unilaminar epithelium which consists of a single layer of squamous cells. Examples: pulmonary alveolar epithelium, endothelium.[FMA].") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "CARO:0000070") Annotation( "CARO") Annotation( ) Annotation( "FMA:45565") "Unilaminar epithelium that consists of a single layer of squamous cells.[CARO]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010066") AnnotationAssertion( "AEO:0000070") AnnotationAssertion( "BILA:0000070") AnnotationAssertion( "BTO:0002073") AnnotationAssertion( "CARO:0000070") AnnotationAssertion( "EHDAA2:0003070") AnnotationAssertion( "FMA:45565") AnnotationAssertion( "HAO:0000070") AnnotationAssertion( "NCIT:C13178") AnnotationAssertion( "TAO:0001498") AnnotationAssertion(Annotation( "ncithesaurus:Simple_Squamous_Epithelium") "UMLS:C0836133") AnnotationAssertion( "XAO:0004010") AnnotationAssertion( "ZFA:0001498") AnnotationAssertion( "epithelium simplex squamosum") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "ZFA:0001498") Annotation( ) "simple squamous epithelia") AnnotationAssertion( "UBERON:0000487") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "simple squamous epithelium") AnnotationAssertion( "Illu:epithelium.jpg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) # Class: (atypical epithelium) AnnotationAssertion(Annotation( ) "Epithelium that consists of epithelial cells not arranged in one ore more layers.") AnnotationAssertion( "AAO:0010057") AnnotationAssertion( "AEO:0000071") AnnotationAssertion( "BILA:0000071") AnnotationAssertion( "CARO:0000071") AnnotationAssertion( "EHDAA2:0003071") AnnotationAssertion( "FMA:61741") AnnotationAssertion( "HAO:0000071") AnnotationAssertion( "TAO:0001493") AnnotationAssertion( "XAO:0004004") AnnotationAssertion( "ZFA:0001493") AnnotationAssertion( "heterogenous epithelium") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "ZFA:0001493") Annotation( ) "atypical epithelia") AnnotationAssertion( "UBERON:0000488") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "atypical epithelium") SubClassOf( ) # Class: (cavitated compound organ) AnnotationAssertion(Annotation( ) "Compound organ that contains one or more macroscopic anatomical spaces.") AnnotationAssertion( "this class was introduced for consistency with CARO, however, it has yet to be used in this or other ontologies. It may be retired in the future") AnnotationAssertion( "AAO:0010016") AnnotationAssertion( "AEO:0000072") AnnotationAssertion( "BILA:0000072") AnnotationAssertion( "CARO:0000072") AnnotationAssertion( "EHDAA2:0003072") AnnotationAssertion( "FMA:55671") AnnotationAssertion( "HAO:0000072") AnnotationAssertion( "TAO:0001490") AnnotationAssertion( "TGMA:0001857") AnnotationAssertion( "VHOG:0001730") AnnotationAssertion( "XAO:0003165") AnnotationAssertion( "ZFA:0001490") AnnotationAssertion(Annotation( "FMA:55671") "cavitated organ") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "ZFA:0001490") Annotation( ) "cavitated compound organs") AnnotationAssertion( "UBERON:0000489") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "cavitated compound organ") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (unilaminar epithelium) AnnotationAssertion(Annotation( ) Annotation( "FMA:45561") "Epithelium which consists of a single layer of epithelial cells. Examples: endothelium, mesothelium, glandular squamous epithelium.[FMA].") AnnotationAssertion( "consider adding disjointness axiom between unilaminar and multilaminar - but note that this will render EHDAA2:0003244 (chorionic trophoblast) unsatisfiable") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "CARO:0000073") Annotation( "CARO") Annotation( ) Annotation( "FMA:45561") "Epithelium that consists of a single layer of epithelial cells.[CARO]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010062") AnnotationAssertion( "AEO:0000073") AnnotationAssertion( "BILA:0000073") AnnotationAssertion( "BTO:0002073") AnnotationAssertion( "CARO:0000073") AnnotationAssertion( "EHDAA2:0003073") AnnotationAssertion( "FMA:45561") AnnotationAssertion( "HAO:0000073") AnnotationAssertion( "NCIT:C33554") AnnotationAssertion( "TAO:0001495") AnnotationAssertion(Annotation( "ncithesaurus:Simple_Epithelium") "UMLS:C0682574") AnnotationAssertion( "XAO:0004007") AnnotationAssertion( "ZFA:0001495") AnnotationAssertion(Annotation( "FMA:45561") "simple epithelium") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "ZFA:0001495") Annotation( ) "unilaminar epithelia") AnnotationAssertion( "UBERON:0000490") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "unilaminar epithelium") SubClassOf( ) # Class: (solid compound organ) AnnotationAssertion(Annotation( ) "Compound organ that does not contain macroscopic anatomical spaces.") AnnotationAssertion( "this class was introduced for consistency with CARO, however, it has yet to be used in this or other ontologies. It may be retired in the future. Note also that we place the FMA class 'solid organ' here, and the FMA includes many glands plus the liver as solid organs, which some may find confusing") AnnotationAssertion( "AAO:0010019") AnnotationAssertion( "AEO:0000074") AnnotationAssertion( "BILA:0000074") AnnotationAssertion( "CARO:0000074") AnnotationAssertion( "EHDAA2:0003074") AnnotationAssertion( "FMA:55670") AnnotationAssertion( "HAO:0000074") AnnotationAssertion( "TAO:0001491") AnnotationAssertion( "TGMA:0001859") AnnotationAssertion( "XAO:0003164") AnnotationAssertion( "ZFA:0001491") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "ZFA:0001491") Annotation( ) "solid compound organs") AnnotationAssertion(Annotation( "FMA:55670") "solid organ") AnnotationAssertion( "UBERON:0000491") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "solid compound organ") SubClassOf( ) # Class: (ileocecal valve) AnnotationAssertion(Annotation( ) "The ileocecal valve is a sphincter muscle situated at the junction of the small intestine (ileum) and the large intestine. Its critical function is to limit the reflux of colonic contents into the ileum.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:15973") AnnotationAssertion( "NCIT:C13066") AnnotationAssertion(Annotation( "ncithesaurus:Ileocecal_Valve") "UMLS:C0020880") AnnotationAssertion( "galen:IleocecalValve") AnnotationAssertion(Annotation( "FMA:15973") "valva ileocaecalis (valva ilealis)") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "Tulp's valve") AnnotationAssertion(Annotation( ) Annotation( ) "valva ileocaecalis") AnnotationAssertion( "UBERON:0000569") AnnotationAssertion(rdfs:label "ileocecal valve") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/f/fc/Gray1075.png"^^xsd:anyURI) SubClassOf(Annotation( "Obol") ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (suspensory ligament of duodenum) AnnotationAssertion(Annotation( ) "A thin muscle connecting the junction between the duodenum, jejunum, and duodenojejunal flexure to connective tissue surrounding the superior mesenteric artery and coeliac artery.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:20509") AnnotationAssertion(Annotation( "FMA:20509") "ligament of Treitz") AnnotationAssertion(Annotation( "FMA:20509") "muscle of Treitz") AnnotationAssertion(Annotation( "FMA:20509") "musculus suspensorius duodeni") AnnotationAssertion(Annotation( "FMA:20509") "suspensory muscle of duodenum") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "musculus suspensorius duodeni") AnnotationAssertion( "UBERON:0000642") AnnotationAssertion(rdfs:label "suspensory ligament of duodenum") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/e/ed/Gray1042.png"^^xsd:anyURI) SubClassOf(Annotation( "Obol") ) SubClassOf(Annotation( "Obol") ObjectSomeValuesFrom( )) SubClassOf(Annotation( "Obol") ObjectSomeValuesFrom( )) # Class: (splenius capitis) AnnotationAssertion(Annotation( ) "A muscle that arises from the lower half of the ligamentum nuchæ, from the spinous process of the seventh cervical vertebra, and from the spinous processes of the upper three or four thoracic vertebræ and inserts the mastoid process of the temporal bone, and into the rough surface on the occipital bone just below the lateral third of the superior nuchal line[WP,modified].") AnnotationAssertion( "Extend, rotate, and laterally flex the head") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:22653") AnnotationAssertion(Annotation( ) "splenius capitis muscle") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "musculus splenius capitis") AnnotationAssertion( "UBERON:0000711") AnnotationAssertion(rdfs:label "splenius capitis") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/5/51/Splenius.png"^^xsd:anyURI) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "Ligamentum nuchae spinous process of C7-T6") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (hippocampal commissure) AnnotationAssertion(Annotation( "ISBN:0-683-40008-8"^^xsd:string) Annotation( "MP:0008221") "The triangular subcallosal plate of commissural fibers resulting from the converging of the right and left fornix bundles which exchange numerous fibers and which curve back in the contralateral fornix to end in the hippocampus of the opposite side.") AnnotationAssertion( "UBERON:Commissure-MA_0002723") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:FC") AnnotationAssertion( "BAMS:FG") AnnotationAssertion( "BAMS:cfx") AnnotationAssertion( "BAMS:dhc") AnnotationAssertion( "BAMS:hc") AnnotationAssertion( "BIRNLEX:746") AnnotationAssertion( "DHBA:10560") AnnotationAssertion( "DMBA:17769") AnnotationAssertion( "EMAPA:35404") AnnotationAssertion( "FMA:61970") AnnotationAssertion( "HBA:9228") AnnotationAssertion( "MA:0002723") AnnotationAssertion( "MBA:618") AnnotationAssertion(Annotation( "BIRNLEX:746") "UMLS:C0228287") AnnotationAssertion(Annotation( "FMA:61970") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "commissura hippocampi") AnnotationAssertion(Annotation( "FMA:61970") "commissure of fornix of forebrain") AnnotationAssertion(Annotation( "MP:0008221") "delta fornicis") AnnotationAssertion(Annotation( "FMA:61970") "dorsal hippocampal commissure") AnnotationAssertion(Annotation( "FMA:61970") "fornical commissure") AnnotationAssertion(Annotation( "FMA:61970") "fornix commissure") AnnotationAssertion(Annotation( "MP:0008221") "hippocampus commissure") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "commissure of fornix") AnnotationAssertion(Annotation( "BAMS:FC") "commissure of the fornix") AnnotationAssertion(Annotation( "BAMS:FG") "commissure of the fornix") AnnotationAssertion(Annotation( "BAMS:hc") "hippocampal commissures") AnnotationAssertion( "UBERON:0000908") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "hippocampal commissure") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/2/21/Gray747.png"^^xsd:anyURI) SubClassOf(Annotation( "MP"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses(Annotation( "NIFSTD"^^xsd:string) ) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (chyme) AnnotationAssertion(Annotation( ) "A semifluid mass of partly digested food expelled by the stomach into the duodenum.") AnnotationAssertion( ) AnnotationAssertion( "ENVO:02000026") AnnotationAssertion( "FMA:62961") AnnotationAssertion(Annotation( "ENVO:02000026") "chymus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0000910") AnnotationAssertion(rdfs:comment "Chyme has a low pH that is countered by the production of bile, helping to further digest food. Chyme is also part liquid and part solid: a thick semifluid mass of partially digested food and digestive secretions that is formed in the stomach and intestine during digestion.") AnnotationAssertion(rdfs:label "chyme") SubClassOf(Annotation( "WP"^^xsd:string) ) SubClassOf(Annotation( "consider changing to derivation relationship") Annotation( "FMA"^^xsd:string) ) DisjointClasses( ) # Class: (chyle) AnnotationAssertion(Annotation( ) Annotation( ) "Chyle is a bodily fluid consisting of a milky fluid consisting of lymph and emulsified fats; formed in the small intestine during digestion of ingested fats.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "ENVO:02000030") AnnotationAssertion( "FMA:61403") AnnotationAssertion( "GAID:1187") AnnotationAssertion( "MESH:A12.207.630.350") AnnotationAssertion( "NCIT:C93166") AnnotationAssertion(Annotation( "ncithesaurus:Chyle") "UMLS:C0008730") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0000911") AnnotationAssertion(rdfs:label "chyle") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (mucus) AnnotationAssertion(Annotation( ) "Mucus is a bodily fluid consisting of a slippery secretion of the lining of the mucous membranes in the body. It is a viscous colloid containing antiseptic enzymes (such as lysozyme) and immunoglobulins. Mucus is produced by goblet cells in the mucous membranes that cover the surfaces of the membranes. It is made up of mucins and inorganic salts suspended in water.") AnnotationAssertion( "mucoid") AnnotationAssertion( "mucous") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "CALOHA:TS-2144") AnnotationAssertion( "ENVO:02000040") AnnotationAssertion( "FMA:66938") AnnotationAssertion( "GAID:1164") AnnotationAssertion( "MESH:D009093") AnnotationAssertion( "NCIT:C13259") AnnotationAssertion( "OpenCyc:Mx4rvVjHq5wpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Mucus") "UMLS:C0026727") AnnotationAssertion( "galen:Mucus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0000912") AnnotationAssertion(rdfs:label "mucus") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (interstitial fluid) AnnotationAssertion(Annotation( ) "Interstitial fluid is a bodily fluid consisting of a solution which bathes and surrounds the cells of multicellular animals. It is the main component of the extracellular fluid, which also includes plasma and transcellular fluid.") AnnotationAssertion( ) AnnotationAssertion( "ENVO:02000042") AnnotationAssertion( "FMA:9673") AnnotationAssertion( "NCIT:C120839") AnnotationAssertion(Annotation( "ENVO:02000042") "intercellular fluid") AnnotationAssertion(Annotation( "ENVO:02000042") "tissue fluid") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0000913") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "interstitial fluid") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (organismal segment) AnnotationAssertion(Annotation( ) Annotation( "FB:gg") "One of the repeated divisions of the whole organism.") AnnotationAssertion( "review this post-CARO2") AnnotationAssertion( ) AnnotationAssertion( "FBbt:00000003") AnnotationAssertion( "HAO:0000929") AnnotationAssertion( "MAT:0000271") AnnotationAssertion( "MIAA:0000271") AnnotationAssertion(Annotation( "FBbt:00000003") "segment") AnnotationAssertion( "serial element") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0000914") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "organismal segment") SubClassOf( ) # Class: (thoracic segment of trunk) AnnotationAssertion(Annotation( ) "Subdivision of trunk that lies between the head and the abdomen.") AnnotationAssertion( "note that we use the slightly verbose term 'thoracic segment of trunk' to avoid confusuon with insect thorax. todo - taxonomic constraints. Also, in FMA 'thorax' is a synonym for chest") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:35862") AnnotationAssertion( "FMA:259209") AnnotationAssertion( "MA:0000022") AnnotationAssertion(Annotation( "MA:0000022") "thorax") AnnotationAssertion( "uberon") AnnotationAssertion( "anterior subdivision of trunk") AnnotationAssertion( "upper body") AnnotationAssertion(Annotation( "FMA:259209") "upper trunk") AnnotationAssertion( "UBERON:0000915") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "thoracic segment of trunk") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (abdomen) AnnotationAssertion(Annotation( ) "The subdivision of the vertebrate body between the thorax and pelvis. The ventral part of the abdomen contains the abdominal cavity and visceral organs. The dorsal part includes the abdominal section of the vertebral column.") AnnotationAssertion( "Vertebrate specific. In arthropods 'abdomen' is the most distal section of the body which lies behind the thorax or cephalothorax. If need be we can introduce some grouping class") AnnotationAssertion( "abdominal") AnnotationAssertion( "celiac") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0000020") AnnotationAssertion( "CALOHA:TS-0001") AnnotationAssertion( "EFO:0000968") AnnotationAssertion( "EMAPA:35102") AnnotationAssertion( "EV:0100011") AnnotationAssertion( "FMA:9577") AnnotationAssertion( "GAID:16") AnnotationAssertion( "MA:0000029") AnnotationAssertion( "MAT:0000298") AnnotationAssertion( "MESH:A01.047") AnnotationAssertion( "MIAA:0000298") AnnotationAssertion( "OpenCyc:Mx4rvVjgyZwpEbGdrcN5Y29ycA") AnnotationAssertion( "galen:Abdomen") AnnotationAssertion(Annotation( "FMA:9577") "abdominopelvic region") AnnotationAssertion(Annotation( "FMA:9577") "abdominopelvis") AnnotationAssertion( "uberon") AnnotationAssertion( "adult abdomen") AnnotationAssertion( "belly") AnnotationAssertion( "celiac region") AnnotationAssertion( "UBERON:0000916") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "abdomen") SubClassOf( ) SubClassOf(Annotation( "MA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (obsolete abdominal segment) AnnotationAssertion( "FBbt:00000021") AnnotationAssertion( "HAO:0000016") AnnotationAssertion( "SPD:0000055") AnnotationAssertion( "UBERON:0002417") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "segment of abdomen") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0000917") AnnotationAssertion(rdfs:label "obsolete abdominal segment") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete yolk) AnnotationAssertion(Annotation( "FB:gg") "The nutritive substance contained in the egg.") AnnotationAssertion( "BTO:0000371") AnnotationAssertion( "FBbt:00000035") AnnotationAssertion( "GO:0060417") AnnotationAssertion( "UBERON:0007378") AnnotationAssertion( "XAO:0000281") AnnotationAssertion( "ZFA:0000084") AnnotationAssertion( "vegetal yolk mass") AnnotationAssertion( "MAT:0000335") AnnotationAssertion( "MIAA:0000335") AnnotationAssertion( "uberon") AnnotationAssertion( "yolk cell") AnnotationAssertion( "UBERON:0000918") AnnotationAssertion(rdfs:label "obsolete yolk") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete lipid droplet) AnnotationAssertion( "GO:0005811") AnnotationAssertion( "FMA:62962") AnnotationAssertion( "GO:0005811") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0000919") AnnotationAssertion(rdfs:label "obsolete lipid droplet") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (egg chorion) AnnotationAssertion(Annotation( ) Annotation( "GO:0042600") "A protective, noncellular membrane that surrounds the eggs of various animals including insects and fish [GO].") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0000329") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "The egg shell. Kimmel et al, 1995.[TAO]") AnnotationAssertion( ) AnnotationAssertion( "FBbt:00000038") AnnotationAssertion( "TAO:0000329") AnnotationAssertion( "TGMA:0000681") AnnotationAssertion( "ZFA:0000329") AnnotationAssertion( "chorion (egg)") AnnotationAssertion( "uberon") AnnotationAssertion( "chorion") AnnotationAssertion( "UBERON:0000920") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "egg chorion") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses( ) # Class: (obsolete pronucleus) AnnotationAssertion( "GO:0045120") AnnotationAssertion( "FBbt:00000048") AnnotationAssertion( "FMA:84673") AnnotationAssertion( "GO:0045120") AnnotationAssertion( ) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0000921") AnnotationAssertion(rdfs:label "obsolete pronucleus") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (embryo) AnnotationAssertion(Annotation( ) Annotation( "BTO:0000379") Annotation( "FB:FBrf0039741") Annotation( "FB:FBrf0041814") Annotation( "GO:0009790") "Anatomical entity that comprises the organism in the early stages of growth and differentiation that are characterized by cleavage, the laying down of fundamental tissues, and the formation of primitive organs and organ systems. For example, for mammals, the process would begin with zygote formation and end with birth. For insects, the process would begin at zygote formation and end with larval hatching. For plant zygotic embryos, this would be from zygote formation to the end of seed dormancy. For plant vegetative embryos, this would be from the initial determination of the cell or group of cells to form an embryo until the point when the embryo becomes independent of the parent plant.") AnnotationAssertion( "embryonic") AnnotationAssertion(Annotation( "ZFA"^^xsd:string) "Obsoleted in ZFA. Note that embryo is not classified as an embryonic structure - an embryonic structure is only the parts of an embryo") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0011035") AnnotationAssertion( "AEO:0000169") AnnotationAssertion( "BILA:0000056") AnnotationAssertion( "BSA:0000039") AnnotationAssertion( "BTO:0000379") AnnotationAssertion( "CALOHA:TS-0229") AnnotationAssertion( "EFO:0001367") AnnotationAssertion( "EHDAA2:0000002") AnnotationAssertion( "EHDAA2_RETIRED:0003236") AnnotationAssertion( "EHDAA:38") AnnotationAssertion( "EMAPA:16039") AnnotationAssertion( "FBbt:00000052") AnnotationAssertion( "FMA:69068") AnnotationAssertion( "GAID:963") AnnotationAssertion( "MAT:0000226") AnnotationAssertion( "MESH:D004622") AnnotationAssertion( "MIAA:0000019") AnnotationAssertion( "NCIT:C28147") AnnotationAssertion( "OGEM:000001") AnnotationAssertion( "OpenCyc:Mx4rwP1ceZwpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Embryo") "UMLS:C0013935") AnnotationAssertion( "VHOG:0001766") AnnotationAssertion( "XAO:0000113") AnnotationAssertion( "ZFA:0000103") AnnotationAssertion(Annotation( "BILA:0000056") "embryonic organism") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BILA:0000056") "developing organism") AnnotationAssertion( "developmental tissue") AnnotationAssertion( "UBERON:0000922") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "embryo") AnnotationAssertion(rdfs:seeAlso "https://github.com/obophenotype/uberon/issues/503"^^xsd:anyURI) AnnotationAssertion( "Wrinkledfrog:embryos.jpg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (germ layer) AnnotationAssertion(Annotation( ) Annotation( ) "A layer of cells produced during the process of gastrulation during the early development of the animal embryo, which is distinct from other such layers of cells, as an early step of cell differentiation. The three types of germ layers are the endoderm, ectoderm, and mesoderm.") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001223") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0878932504 Gilbert SF, Developmental Biology (2006) Limb development and evolution, p.722") "The Bilateria are triploblastic (with true endoderm, mesoderm, and ectoderm) (...).[well established][VHOG]") AnnotationAssertion(Annotation( "FMA:69069") "embryonic tissue") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0000480") AnnotationAssertion( "BILA:0000035") AnnotationAssertion( "BTO:0000556") AnnotationAssertion( "EMAPA:36033") AnnotationAssertion( "FBbt:00000110") AnnotationAssertion( "FMA:69069") AnnotationAssertion( "GAID:1303") AnnotationAssertion( "MESH:A16.254.425") AnnotationAssertion( "NCIT:C12950") AnnotationAssertion( "NCIT:C54105") AnnotationAssertion( "TAO:0001122") AnnotationAssertion(Annotation( "ncithesaurus:Embryonic_Tissue") "UMLS:C0920502") AnnotationAssertion(Annotation( "ncithesaurus:Germinal_Layer") "UMLS:C1708239") AnnotationAssertion( "VHOG:0001223") AnnotationAssertion( "XAO:0003011") AnnotationAssertion( "ZFA:0001122") AnnotationAssertion(Annotation( "ncithesaurus:Germinal_Layer") "germinal layer") AnnotationAssertion(Annotation( "GO:0001704") Annotation( "ZFA:0001122") "primary germ layer") AnnotationAssertion( "uberon") AnnotationAssertion( "embryonic germ layer") AnnotationAssertion( "embryonic germ layers") AnnotationAssertion( "UBERON:0000923") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "Classically the germ layers are ectoderm, mesoderm and endoderm. Alternatively: primary = ectoderm, endoderm; secondary=mesoderm; tertiary=dorsal mesoderm, NC[https://github.com/obophenotype/uberon/wiki/The-neural-crest]") AnnotationAssertion(rdfs:label "germ layer") SubClassOf( ) # Class: (ectoderm) AnnotationAssertion(Annotation( ) "Primary germ layer that is the outer of the embryo's three germ layers and gives rise to epidermis and neural tissue.") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0000137") Annotation( "AAO"^^xsd:string) Annotation( "AAO:EJS"^^xsd:string) "Primary germ layer that is the outer of the embryonic germ layers and gives rise to epidermis and neural tissue.[AAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000153") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0878932504 Gilbert SF, Developmental Biology (2006) Limb development and evolution, p.722") "The Bilateria are triploblastic (with true endoderm, mesoderm, and ectoderm) (...).[well established][VHOG]") AnnotationAssertion( "ectodermal") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0000137") AnnotationAssertion( "BILA:0000036") AnnotationAssertion( "BTO:0000315") AnnotationAssertion( "CALOHA:TS-0216") AnnotationAssertion( "EFO:0000414") AnnotationAssertion( "EHDAA2:0000428") AnnotationAssertion( "EMAPA:16069") AnnotationAssertion( "EV:0100003") AnnotationAssertion( "FBbt:00000111") AnnotationAssertion( "FMA:69070") AnnotationAssertion( "GAID:1304") AnnotationAssertion( "MAT:0000155") AnnotationAssertion( "MAT:0000173") AnnotationAssertion( "MESH:A16.254.425.273") AnnotationAssertion( "MIAA:0000173") AnnotationAssertion( "NCIT:C12703") AnnotationAssertion( "TAO:0000016") AnnotationAssertion(Annotation( "ncithesaurus:Ectoderm") "UMLS:C0013574") AnnotationAssertion( "VHOG:0000153") AnnotationAssertion( "XAO:0000001") AnnotationAssertion( "ZFA:0000016") AnnotationAssertion(Annotation( "VHOG:0000153") "embryonic ectoderm") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0000924") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "ectoderm") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/1/19/Gray32.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "Bgee:AN"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (endoderm) AnnotationAssertion(Annotation( ) "Primary germ layer that lies remote from the surface of the embryo and gives rise to internal tissues such as gut.") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000154") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0878932504 Gilbert SF, Developmental Biology (2006) Limb development and evolution, p.722") "The Bilateria are triploblastic (with true endoderm, mesoderm, and ectoderm) (...).[well established][VHOG]") AnnotationAssertion( "endodermal") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0000139") AnnotationAssertion( "BILA:0000038") AnnotationAssertion( "BTO:0000800") AnnotationAssertion( "CALOHA:TS-0273") AnnotationAssertion( "EFO:0002545") AnnotationAssertion( "EHDAA2:0000436") AnnotationAssertion( "EMAPA:16062") AnnotationAssertion( "EV:0100005") AnnotationAssertion( "FBbt:00000125") AnnotationAssertion( "FMA:69071") AnnotationAssertion( "GAID:1305") AnnotationAssertion( "MAT:0000175") AnnotationAssertion( "MESH:A16.254.425.407") AnnotationAssertion( "MIAA:0000175") AnnotationAssertion( "NCIT:C12706") AnnotationAssertion( "TAO:0000017") AnnotationAssertion(Annotation( "ncithesaurus:Endoderm") "UMLS:C0014144") AnnotationAssertion( "VHOG:0000154") AnnotationAssertion( "XAO:0000090") AnnotationAssertion( "ZFA:0000017") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "entoderm") AnnotationAssertion( "UBERON:0000925") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "endoderm") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/c/c0/Endoderm2.png"^^xsd:anyURI) AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/d/df/Gray10.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "Bgee:AN"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (mesoderm) AnnotationAssertion(Annotation( ) "The middle germ layer of the embryo, between the endoderm and ectoderm.") AnnotationAssertion( ) AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0000304") Annotation( "AAO"^^xsd:string) Annotation( "AAO:EJS"^^xsd:string) "Primary germ layer that is the middle of the embryonic germ layers.[AAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000152") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0878932504 Gilbert SF, Developmental Biology (2006) Limb development and evolution, p.722") "The Bilateria are triploblastic (with true endoderm, mesoderm, and ectoderm) (...).[well established][VHOG]") AnnotationAssertion( "mesodermal") AnnotationAssertion(Annotation( ) "sponges do not seem to have a mesoderm and accordingly Amphimedon lacks transcription factors involved in mesoderm development (Fkh, Gsc, Twist, Snail)[http://www.nature.com/nature/journal/v466/n7307/full/nature09201.html]. Mesoderm may not be homologous across verteberates") AnnotationAssertion( "UBERON:0003263") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0000304") AnnotationAssertion( "BILA:0000037") AnnotationAssertion( "BTO:0000839") AnnotationAssertion( "CALOHA:TS-0623") AnnotationAssertion( "EFO:0001981") AnnotationAssertion( "EHDAA2:0001128") AnnotationAssertion( "EHDAA:124") AnnotationAssertion( "EHDAA:160") AnnotationAssertion( "EHDAA:183") AnnotationAssertion( "EMAPA:16083") AnnotationAssertion( "EV:0100006") AnnotationAssertion( "FBbt:00000126") AnnotationAssertion( "FMA:69072") AnnotationAssertion( "GAID:522") AnnotationAssertion( "MAT:0000174") AnnotationAssertion( "MESH:A16.254.425.660") AnnotationAssertion( "MIAA:0000174") AnnotationAssertion( "NCIT:C12750") AnnotationAssertion( "TAO:0000041") AnnotationAssertion(Annotation( "ncithesaurus:Mesoderm") "UMLS:C0025485") AnnotationAssertion( "VHOG:0000152") AnnotationAssertion( "XAO:0000050") AnnotationAssertion( "ZFA:0000041") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "VHOG:0000152") "embryonic mesoderm") AnnotationAssertion(Annotation( ) Annotation( ) "entire mesoderm") AnnotationAssertion( "mesodermal mantle") AnnotationAssertion( "UBERON:0000926") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "mesoderm") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/e/e8/Mesoderm.png"^^xsd:anyURI) SubClassOf(Annotation( "sometimes not considered primary") ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "Bgee:AN"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (mesectoderm) AnnotationAssertion(Annotation( "FB:FBrf0089570") "A double row of cells which are located at the midline from the end of gastrulations. The morphology of these cells is distinct from adjacent ectodermal cells - they are elongated such that one end remains exposed to the outside of the embryo at the mideline while the other end bissects the internalised mesoderm.") AnnotationAssertion( "mesectodermal") AnnotationAssertion( "EFO:0003336") AnnotationAssertion( "FBbt:00000136") AnnotationAssertion( "MAT:0000243") AnnotationAssertion( "MIAA:0000243") AnnotationAssertion( "uberon") AnnotationAssertion( "MesEc") AnnotationAssertion( "UBERON:0000927") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "Split term? The part of the mesenchyme derived from ectoderm, especially from the embryonic neural crest from which the pigment cells, meninges, and most of the branchial cartilages develop.[TFD]") AnnotationAssertion(rdfs:label "mesectoderm") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete embryonic segment) AnnotationAssertion( "FBbt:00000154") AnnotationAssertion( "MAT:0000244") AnnotationAssertion( "MIAA:0000244") AnnotationAssertion( "segment - embryonic") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0000928") AnnotationAssertion(rdfs:label "obsolete embryonic segment") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (pharyngeal branch of vagus nerve) AnnotationAssertion(Annotation( ) "Motor nerve of the pharynx, arises from the upper part of the ganglion nodosum, and consists principally of filaments from the cranial portion of the accessory nerve.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:6234") AnnotationAssertion(Annotation( "FMA:6234") "pharyngeal branch") AnnotationAssertion(Annotation( "FMA:6234") "pharyngeal branch of inferior vagal ganglion") AnnotationAssertion(Annotation( "FMA:6234") "pharyngeal branch of vagus") AnnotationAssertion(Annotation( "FMA:6234") "ramus pharyngealis nervi vagalis") AnnotationAssertion(Annotation( "FMA:6234") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "ramus pharyngeus") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) "ramus pharyngeus") AnnotationAssertion(Annotation( "FMA:6234") "tenth cranial nerve pharyngeal branch") AnnotationAssertion(Annotation( "FMA:6234") "vagal pharyngeal branch") AnnotationAssertion(Annotation( "FMA:6234") "vagus nerve pharyngeal branch") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "ramus pharyngeus nervi vagi") AnnotationAssertion( "UBERON:0000929") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "pharyngeal branch of vagus nerve") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/5/5e/Gray791.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (stomodeum) AnnotationAssertion(Annotation( ) Annotation( ) Annotation( ) "Anterior part of the embryonic digestive tract that develops into a mouth. The stomodeum includes as parts an invagination of the ectoderm and the stomodeal cavity.") AnnotationAssertion( "consider indicating location. e.g. anterior. Note some AOs place this as part of oral opening, but it's not clear when this structure comes into existence") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0001290") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "Anterior part of the embryonic alimentary canal formed as an invagination of the ectoderm; the future mouth.[TAO]") AnnotationAssertion(Annotation( "MP:0012522") Annotation( "NCBITaxon:40674") "the primordial mouth region of the developing head, initially a midline ectodermal depression between the forebrain bulge (cranially) and the heart bulge (caudally) and between the maxillary and mandibular components of the first pharyngeal arch; the stomodeum is separated from the anterior end of the foregut by the buccopharyngeal membrane; the mouth is developed partly from the stomodeum, and partly from the floor of the anterior portion of the foregut; the lips, teeth, and gums are formed from the walls of the stomodeum, but the tongue is developed in the floor of the pharynx") AnnotationAssertion( "stomodeal") AnnotationAssertion( "This class groups together disparate structures as all being the anterior part of the early metazoan digestive tract and precursor of the mouth. However, the developmental processes vary, so this class may be split in future. E.g. in mammals it is a rostral depression surrounded by prominences. Outgrowth of the prominences produces a stomodeal cavity.") AnnotationAssertion(Annotation( "XAO:0000269") "stomodeal-hypophyseal primordium") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0004224") AnnotationAssertion( "EHDAA2:0001929") AnnotationAssertion( "EMAPA:16263") AnnotationAssertion( "FBbt:00000439") AnnotationAssertion( "FMA:295846") AnnotationAssertion( "NCIT:C34306") AnnotationAssertion( "TAO:0001290") AnnotationAssertion( "TGMA:0000135") AnnotationAssertion(Annotation( "ncithesaurus:Stomodeum") "UMLS:C1514977") AnnotationAssertion( "XAO:0000269") AnnotationAssertion( "ZFA:0001290") AnnotationAssertion(Annotation( "XAO:0000269") "mouth primordium") AnnotationAssertion(Annotation( ) "primitive oral cavity") AnnotationAssertion(Annotation( ) "stomatodeum") AnnotationAssertion( "stomodaeum") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "EMAPA:16263") "mouth pit") AnnotationAssertion(Annotation( "ZFA:0001290") Annotation( "ZFIN:ZDB-PUB-100726-23") "oral ectoderm") AnnotationAssertion(Annotation( "EMAPA:16263") "oral pit") AnnotationAssertion( "UBERON:0000930") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "stomodeum") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/9/93/Gray977.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (proctodeum) AnnotationAssertion(Annotation( ) Annotation( ) Annotation( "ZFA:0000066") "Inward fold on the surface of the embryonic ectoderm that develops into an ectodermal terminal part of the digestive tract.") AnnotationAssertion( "removed WBbt:0006795 'proctodeum' - junction between the alimentary and genital tracts in the male.") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0000066") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "An inward fold on the surface of the embryonic ectoderm that develops into part of the anal passage.[TAO]") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0011087") Annotation( "AAO"^^xsd:string) Annotation( "ZFA:0000066") "Inward fold on the surface of the embryonic ectoderm that develops into part of the anal passage.[AAO]") AnnotationAssertion( "proctodeal") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0011087") AnnotationAssertion( "EHDAA2:0000121") AnnotationAssertion( "EMAPA:25038") AnnotationAssertion( "FBbt:00000123") AnnotationAssertion( "NCIT:C34278") AnnotationAssertion( "TAO:0000066") AnnotationAssertion(Annotation( "ncithesaurus:Proctodeum") "UMLS:C0231054") AnnotationAssertion( "VHOG:0000139") AnnotationAssertion( "XAO:0001019") AnnotationAssertion( "ZFA:0000066") AnnotationAssertion( "embryonic proctodaeum") AnnotationAssertion( "proctodaeum") AnnotationAssertion(Annotation( "FBbt:00000123") "amnioproctodeal invagination") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "VHOG:0000139") "anal pit") AnnotationAssertion(Annotation( "XAO:0001019") "anus porus") AnnotationAssertion( "UBERON:0000931") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "proctodeum") AnnotationAssertion(rdfs:seeAlso "https://github.com/obophenotype/uberon/issues/685"^^xsd:anyURI) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete ventral longitudinal muscle) AnnotationAssertion( "FBbt:00000482") AnnotationAssertion( "WBbt:0005814") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0000932") AnnotationAssertion(rdfs:comment "originally unified on basis of terminological similarity") AnnotationAssertion(rdfs:label "obsolete ventral longitudinal muscle") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (pharyngeal muscle) AnnotationAssertion(Annotation( ) Annotation( ) "A muscle that acts on the pharynx[WP, vetted].") AnnotationAssertion(Annotation( "2012-06-30") Annotation( "GO:0043282") Annotation( "does not quite work for some muscles such as stylopharyngeus") Annotation( "GO") Annotation( "GOC:go_curators") "A pharyngeal muscle is any muscle that forms part of the pharynx[GO].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0001048") AnnotationAssertion( "EFO:0003504") AnnotationAssertion( "EMAPA:18963") AnnotationAssertion( "FMA:46619") AnnotationAssertion( "GAID:154") AnnotationAssertion( "MA:0001797") AnnotationAssertion( "MESH:D010609") AnnotationAssertion( "NCIT:C13075") AnnotationAssertion( "TAO:0000172") AnnotationAssertion(Annotation( "ncithesaurus:Pharyngeal_Muscle") "UMLS:C0031346") AnnotationAssertion( "ZFA:0000172") AnnotationAssertion(Annotation( "ZFA:0000172") "branchial muscle") AnnotationAssertion( "muscle of pharynx") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "muscle organ of pharynx") AnnotationAssertion( "pharynx muscle") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "pharynx muscle organ") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "TAO:0000172") Annotation( ) "branchial muscles") AnnotationAssertion(Annotation( ) Annotation( ) "musculi pharyngis") AnnotationAssertion(Annotation( "BTO:0001048") "musculus pharyngis") AnnotationAssertion(Annotation( ) Annotation( ) "tunica muscularis pharyngis") AnnotationAssertion( "UBERON:0000933") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "Innervation notes: They are innervated by the pharyngeal branch of the Vagus nerve (CN X) with the exception of the stylopharyngeus muscle which is innervated by the glossopharyngeal nerve (CN IX).[WP]") AnnotationAssertion(rdfs:label "pharyngeal muscle") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/3/35/Gray1030.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (anterior commissure) AnnotationAssertion(Annotation( "BTO:0002169") "A bundle of myelinated nerve fibers passing transversely through the lamina terminalis and connecting symmetrical parts of the two cerebral hemispheres; it consists of a smaller anterior part (pars anterior commissurae anterioris) and a larger posterior part (pars posterior commissurae anterioris).") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001558") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( ) "In all vertebrates the thin structure that connects the two halves of the telencephalon shows a ridge-like thickening at the basal side known as the anterior commissure.[well established][VHOG]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:AC") AnnotationAssertion( "BAMS:AG") AnnotationAssertion( "BAMS:Ac") AnnotationAssertion( "BAMS:ac") AnnotationAssertion( "BIRNLEX:1557") AnnotationAssertion( "BM:Tel-AC") AnnotationAssertion( "BTO:0002169") AnnotationAssertion( "DHBA:10559") AnnotationAssertion( "DMBA:17751") AnnotationAssertion( "EMAPA:19038") AnnotationAssertion( "FMA:61961") AnnotationAssertion( "HBA:9221") AnnotationAssertion( "MA:0002722") AnnotationAssertion( "NCIT:C32086") AnnotationAssertion( "NLX:144088") AnnotationAssertion( "TAO:0001108") AnnotationAssertion(Annotation( "BIRNLEX:1557") "UMLS:C0152335") AnnotationAssertion(Annotation( "ncithesaurus:Anterior_Commissure") "UMLS:C0152335") AnnotationAssertion( "VHOG:0001558") AnnotationAssertion( "ZFA:0001108") AnnotationAssertion(Annotation( ) "anterior cerebral commissure") AnnotationAssertion(Annotation( "NeuroNames:205") Annotation( ) "commissura anterior cerebri") AnnotationAssertion( "commissura rostralis") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NLX:144088") Annotation( ) "AC") AnnotationAssertion(Annotation( "BAMS:AC") "anterior commissural nucleus") AnnotationAssertion(Annotation( ) Annotation( ) "commissura anterior") AnnotationAssertion( "commissura rostral") AnnotationAssertion(Annotation( "NeuroNames:205") "paleocortical commissure") AnnotationAssertion(Annotation( ) "precommisure") AnnotationAssertion(Annotation( "NeuroNames:205") "rostral commissure") AnnotationAssertion( "UBERON:0000935") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "anterior commissure") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/b/b4/Gray744.png"^^xsd:anyURI) SubClassOf(Annotation( "FMA"^^xsd:string) Annotation( "MA"^^xsd:string) ) SubClassOf(Annotation( "MP"^^xsd:string) ) DisjointClasses(Annotation( "lexical"^^xsd:string) ) # Class: (posterior commissure) AnnotationAssertion(Annotation( ) Annotation( "ZFA:0000320") "Rounded band of white fibers crossing the middle line on the dorsal aspect of the upper end of the cerebral aqueduct. It is important in the bilateral pupillary light reflex. Its fibers acquire their medullary sheaths early, but their connections have not been definitely determined. Most of them have their origin in a nucleus, the nucleus of the posterior commissure (nucleus of Darkschewitsch), which lies in the central gray substance of the upper end of the cerebral aqueduct, in front of the nucleus of the oculomotor nerve. Some are probably derived from the posterior part of the thalamus and from the superior colliculus, whereas others are believed to be continued downward into the medial longitudinal fasciculus. The posterior commissure interconnects the pretectal nuclei, mediating the consensual pupillary light reflex[WP]. Diencephalic tract which is located in the vicinity of the dorsal diencephalon and mesencephalon and connects the pretectal nuclei. From Neuroanatomy of the Zebrafish Brain[ZFA].") AnnotationAssertion( "add connects relationships and check these outside mammalia") AnnotationAssertion(Annotation( "MA"^^xsd:string) "part_of brainstem in MA; midbrain tectum in NIF") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:PC") AnnotationAssertion( "BAMS:pc") AnnotationAssertion( "BIRNLEX:1026") AnnotationAssertion( "BM:MB-Tec-PC") AnnotationAssertion( "DHBA:10567") AnnotationAssertion( "DMBA:17787") AnnotationAssertion( "EMAPA:35695") AnnotationAssertion( "FMA:62072") AnnotationAssertion( "HBA:9229") AnnotationAssertion( "MA:0002743") AnnotationAssertion( "MBA:158") AnnotationAssertion( "NCIT:C33356") AnnotationAssertion( "TAO:0000320") AnnotationAssertion(Annotation( "BIRNLEX:1026") "UMLS:C0152327") AnnotationAssertion(Annotation( "ncithesaurus:Posterior_Commissure") "UMLS:C0152327") AnnotationAssertion( "ZFA:0000320") AnnotationAssertion(Annotation( "BIRNLEX:1026") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=484") AnnotationAssertion(Annotation( "FMA:62072") Annotation( "ZFA:0000320") "caudal commissure") AnnotationAssertion(Annotation( "FMA:62072") "epithalamic commissure") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:484") Annotation( ) "commissura epithalami") AnnotationAssertion(Annotation( "NeuroNames:484") Annotation( ) "commissura epithalamica") AnnotationAssertion(Annotation( ) Annotation( ) "commissura posterior") AnnotationAssertion(Annotation( "NeuroNames:484") "posterior commissure (Lieutaud)") AnnotationAssertion( "UBERON:0000936") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "posterior commissure") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/d/d7/Gray715.png"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete proneural cluster) AnnotationAssertion( "FBbt:00001135") AnnotationAssertion( "ZFA:0000068") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "ZFA:0000068") "proneural clusters") AnnotationAssertion( "UBERON:0000937") AnnotationAssertion(rdfs:comment "obsoleted because inconsistencies arise due to ZFA term being both embryonic and extraembryonic") AnnotationAssertion(rdfs:label "obsolete proneural cluster") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (cranial nerve II) AnnotationAssertion(Annotation( "ISBN:0471209627") Annotation( "ISBN:0471888893"^^xsd:string) "Cranial nerve fiber tract which is comprised of retinal ganglion cell axons running posterior medially towards the optic chiasm, at which some of the axons cross the midline and after which the structure is termed the optic tract. Transmits visual information from the retina to the brain[ZFA].") AnnotationAssertion( "Do not classify under 'cranial nerve', as this is not a true nerve - should be classified as evaginated sensory afferent[ISBN:0471888893]") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0000435") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "A collection of nerve cells that project visual information from the eyes to the brain. (Source: BioGlossary, www.Biology-Text.com)[TAO]") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0010345") Annotation( "AAO"^^xsd:string) Annotation( "AAO:EJS"^^xsd:string) "Fibrous, somatic sensory element covered by a fibrous connective-tissue sheath and is continuous with the layer of nerve cells on the inner surface of the eye.[AAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000543") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0030223693 Liem KF, Bemis WE, Walker WF, Grande L, Functional Anatomy of the Vertebrates: An Evolutionary Perspective (2001) p.429, http://medical-dictionary.thefreedictionary.com/optic+stalk") "(...) an essentially similar sequence of events occurs during the embryonic development of the vertebrate eye. The eye initially develops as a single median evagination of the diencephalon that soon bifurcates to form the paired optic vesicles. As each optic vesicle grows towards the body surface, its proximal part narrows as the optic stalk, and its distal part invaginates to form a two-layered optic cup (reference 1); The (optic) stalk persists as the optic nerve (reference 2).[well established][VHOG]") AnnotationAssertion(Annotation( "MA"^^xsd:string) "(relaion to eye): MA, XAO, AAO and BTO consider this part of the eye. This is in contrast to GO, FMA, EHDAA2 (FMA has a class 'intra-ocular part of optic nerve' which represents the region of overlap). Relation to brain: part of diencephalon in EHDAA2, ZFA. In NIF, has the optic nerve root as part, which is a feature part of the diencphalon") AnnotationAssertion(Annotation( "BIRNLEX:1640") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "2n") AnnotationAssertion(Annotation( "FMA:50863") Annotation( "ZFA:0000435") Annotation( ) "optic nerve") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010345") AnnotationAssertion( "BAMS:2n") AnnotationAssertion( "BAMS:IIn") AnnotationAssertion( "BAMS:nII") AnnotationAssertion( "BIRNLEX:1640") AnnotationAssertion( "CALOHA:TS-0713") AnnotationAssertion( "DHBA:15544") AnnotationAssertion( "EFO:0004258") AnnotationAssertion( "EHDAA2:0001313") AnnotationAssertion( "EHDAA:6788") AnnotationAssertion( "EMAPA:17575") AnnotationAssertion( "FMA:50863") AnnotationAssertion( "GAID:831") AnnotationAssertion( "HBA:9307") AnnotationAssertion( "MA:0001097") AnnotationAssertion( "MBA:848") AnnotationAssertion( "MESH:D009900") AnnotationAssertion( "NCIT:C12761") AnnotationAssertion( "OpenCyc:Mx4rvVjLm5wpEbGdrcN5Y29ycA") AnnotationAssertion( "TAO:0000435") AnnotationAssertion(Annotation( "BIRNLEX:1640") "UMLS:C0029130") AnnotationAssertion(Annotation( "ncithesaurus:Optic_Nerve") "UMLS:C0029130") AnnotationAssertion( "VHOG:0000543") AnnotationAssertion( "XAO:0000188") AnnotationAssertion( "ZFA:0000435") AnnotationAssertion(Annotation( "BIRNLEX:1640") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=289") AnnotationAssertion(Annotation( "AAO:0010345") "02 optic nerve") AnnotationAssertion( "cranial II") AnnotationAssertion(Annotation( ) "nervus opticus") AnnotationAssertion(Annotation( "FMA:50863") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "nervus opticus [II]") AnnotationAssertion(Annotation( "EHDAA2:0001313") "optic II") AnnotationAssertion(Annotation( "EHDAA2:0001313") "optic II nerve") AnnotationAssertion( "optic nerve [II]") AnnotationAssertion( "second cranial nerve") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "ZFA:0000435") "CN-II") AnnotationAssertion(Annotation( "NeuroNames:289") "nerve II") AnnotationAssertion(Annotation( "TAO:0000435") "optic") AnnotationAssertion( "UBERON:0000941") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "cranial nerve II") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (frontal nerve (branch of ophthalmic)) AnnotationAssertion(Annotation( ) "The frontal nerve is the largest branch of the ophthalmic, and may be regarded, both from its size and direction, as the continuation of the nerve. It enters the orbit through the supraorbital foramen, and runs forward between the Levator palpebræ superioris and the periosteum. Midway between the apex and base of the orbit it divides into two branches, supratrochlear nerve and supraorbital nerve. [WP,unvetted].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:52638") AnnotationAssertion( "NCIT:C32638") AnnotationAssertion(Annotation( "ncithesaurus:Frontal_Nerve") "UMLS:C0228712") AnnotationAssertion(Annotation( "FMA:52638") "frontal nerve") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "nervus frontalis") AnnotationAssertion( "UBERON:0000942") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "frontal nerve (branch of ophthalmic)") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/4/45/Gray787.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (obsolete labial sensillum) AnnotationAssertion( "FBbt:00002721") AnnotationAssertion( "WBbt:0005107") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0000943") AnnotationAssertion(rdfs:label "obsolete labial sensillum") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete dorsal branch) AnnotationAssertion( "FBbt:00003051") AnnotationAssertion( "FMA:76733") AnnotationAssertion( "dorsal vein") AnnotationAssertion(Annotation( "FMA:76733") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "ramus dorsalis") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0000944") AnnotationAssertion(rdfs:label "obsolete dorsal branch") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (stomach) AnnotationAssertion(Annotation( ) Annotation( ) Annotation( "ISBN:0073040584"^^xsd:string) "An expanded region of the vertebrate alimentary tract that serves as a food storage compartment and digestive organ. A stomach is lined, in whole or in part by a glandular epithelium.") AnnotationAssertion(Annotation( "Wikipedia"^^xsd:string) ) AnnotationAssertion(Annotation( "Wikipedia"^^xsd:string) ) AnnotationAssertion(Annotation( "ZFA"^^xsd:string) ) AnnotationAssertion(Annotation( "Wikipedia"^^xsd:string) ) AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0000579") Annotation( "AAO"^^xsd:string) Annotation( "AAO:EJS"^^xsd:string) "Portion of alimentary canal with increased circular and longitudinal smooth muscle. Bounded posteriorly by the pyloric sphincter. Mucosal lining has increased folding.[AAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000408") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "DOI:10.1046/j.1525-142x.2000.00076.x Smith DM, Grasty RC, Theodosiou NA, Tabin CJ, Nascone-Yoder NM, Evolutionary relationships between the amphibian, avian, and mammalian stomachs. Evolution and development (2000)") "It appears that the stomach has an ancient origin. The stomach first appears in the fish lineage. The prevertebrate chordates do not have a true stomach, whereas the cartilaginous and bony fish do. Although most fish do have a true stomach, some fish species appear to have lost the stomach secondarily. The remaining vertebrate lineages do have a true stomach (at least in the adult animal), although there is great variation in the size and shape of the stomach.[well established][VHOG]") AnnotationAssertion(Annotation( "WP:Stomach#In_other_animals") "We restrict this to the vertebrate specific structure - see the grouping class 'food storage organ' for analogous structures in other species. Teleosts: Zebrafish is functionally stomach-less, but may retain ontogenic footprint. Although the precise shape and size of the stomach varies widely among different vertebrates, the relative positions of the oesophageal and duodenal openings remain relatively constant. As a result, the organ always curves somewhat to the left before curving back to meet the pyloric sphincter. However, lampreys, hagfishes, chimaeras, lungfishes, and some teleost fish have no stomach at all, with the oesophagus opening directly into the intestine. The gastric lining is usually divided into two regions, an anterior portion lined by fundic glands, and a posterior with pyloric glands. Cardiac glands are unique to mammals, and even then are absent in a number of species. The distributions of these glands vary between species, and do not always correspond with the same regions as in man. Furthermore, in many non-human mammals, a portion of the stomach anterior to the cardiac glands is lined with epithelium essentially identical to that of the oesophagus. Ruminants, in particular, have a complex stomach, the first three chambers of which are all lined with oesophageal mucosa") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0000579") AnnotationAssertion( "ANISEED:1235297") AnnotationAssertion( "BTO:0001307") AnnotationAssertion( "CALOHA:TS-0980") AnnotationAssertion( "EFO:0000837") AnnotationAssertion( "EHDAA2:0001915") AnnotationAssertion( "EHDAA:2993") AnnotationAssertion( "EMAPA:17021") AnnotationAssertion( "EV:0100070") AnnotationAssertion( "FMA:7148") AnnotationAssertion( "GAID:293") AnnotationAssertion( "MA:0000353") AnnotationAssertion( "MAT:0000051") AnnotationAssertion( "MESH:A03.492.766") AnnotationAssertion( "MIAA:0000051") AnnotationAssertion( "NCIT:C12391") AnnotationAssertion( "OpenCyc:Mx4rvVjlqpwpEbGdrcN5Y29ycA") AnnotationAssertion( "TAO:0002121") AnnotationAssertion(Annotation( "ncithesaurus:Stomach") "UMLS:C0038351") AnnotationAssertion( "VHOG:0000408") AnnotationAssertion( "XAO:0000128") AnnotationAssertion( "galen:Stomach") AnnotationAssertion( "stomach chamber") AnnotationAssertion( "uberon") AnnotationAssertion( "anterior intestine") AnnotationAssertion(Annotation( "BTO:0001307") "gaster") AnnotationAssertion( "mesenteron") AnnotationAssertion(Annotation( ) Annotation( ) "ventriculus") AnnotationAssertion( "UBERON:0000945") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "stomach") AnnotationAssertion( "Stomach:diagram.svg"^^xsd:anyURI) SubClassOf(Annotation( "cjm"^^xsd:string) ) SubClassOf(Annotation( "cjm"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (cardial valve) AnnotationAssertion(Annotation( ) Annotation( "MESH:A07.541.510") Annotation( "MP:0000285") "A membranous fold of the heart that prevents reflux of fluid.") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000818") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( ) "One of the four structures within the heart that prevent backflow of blood by opening and closing with each heartbeat. The valves include two semilunar valves, the aortic and pulmonary; the mitral or bicuspid valve; and the tricuspid valve. The valves permit blood flow in only one direction. [TFD][VHOG]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000818") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "DOI:10.1161/CIRCRESAHA.109.201566 Combs MD, Yutzey KE, Heart valve development. Circulatory Research (2009)") "Extensive conservation of valve developmental mechanisms also has been observed among vertebrate species including chicken, mouse, and human.[well established][VHOG]") AnnotationAssertion( "Rector et al: One might be tempted to define 'heart valve' equivalently to 'valve in the heart', and 'valve' as a 'structure which functions as a valve'. But this combination results in the 'foramen ovale' being classified as a kind of 'heart valve', since it is undoubtedly located in the heart and functions as a valve") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0000564") AnnotationAssertion( "EMAPA:17869") AnnotationAssertion( "EV:0100024") AnnotationAssertion( "FMA:7110") AnnotationAssertion( "GAID:176") AnnotationAssertion( "MA:0000086") AnnotationAssertion( "MESH:D006351") AnnotationAssertion( "NCIT:C12729") AnnotationAssertion( "OpenCyc:Mx4rv8oyuJwpEbGdrcN5Y29ycA") AnnotationAssertion( "TAO:0005065") AnnotationAssertion(Annotation( "ncithesaurus:Cardiac_Valve") "UMLS:C0018826") AnnotationAssertion( "VHOG:0000818") AnnotationAssertion( "XAO:0004126") AnnotationAssertion( "ZFA:0005065") AnnotationAssertion( "galen:HeartValve") AnnotationAssertion( "heart valve") AnnotationAssertion( "valve of heart") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "GO:0003170") "cardiac valve") AnnotationAssertion(Annotation( "XAO:0004126") "heart valve") AnnotationAssertion( "heart valves") AnnotationAssertion( "stomodaeal valve") AnnotationAssertion( "valvule") AnnotationAssertion( "UBERON:0000946") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "cardial valve") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses( ) # Class: (aorta) AnnotationAssertion(Annotation( ) Annotation( ) Annotation( "ISBN:0-683-40008-8"^^xsd:string) Annotation( "MESH:A07.231.114.056") Annotation( "MP:0000272") "The main trunk of the systemic arterial system that carries blood from the heart to all the organs and other structures of the body, bringing oxygenated blood to all parts of the body in the systemic circulation.") AnnotationAssertion(Annotation( "WP"^^xsd:string) "This class is currently a mixed bag, encompassing (1) the entirety of the mammalian aorta together with (2) the developmental and phylogenetic homologs of its segments: the ventral aorta and dorsal aortae.") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0010213") Annotation( "AAO"^^xsd:string) Annotation( "AAO:BJB"^^xsd:string) "The main artery of the circulatory system which carries oxygenated blood from the heart to all the arteries of the body except those of the lungs.[AAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001523") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0030223693 Liem KF, Bemis WE, Walker WF, Grande L, Functional Anatomy of the Vertebrates: An Evolutionary Perspective (2001) p.620") "When vertebrates first appeared, they must have possessed a ventral and dorsal aorta with aortic arches between them.[well established][VHOG]") AnnotationAssertion( "aortic") AnnotationAssertion( "All amniotes have a broadly similar arrangement to that of humans, albeit with a number of individual variations. In fish, however, there are two separate vessels referred to as aortas. The ventral aorta carries de-oxygenated blood from the heart to the gills; part of this vessel forms the ascending aorta in tetrapods (the remainder forms the pulmonary artery). A second, dorsal aorta carries oxygenated blood from the gills to the rest of the body, and is homologous with the descending aorta of tetrapods. The two aortas are connected by a number of vessels, one passing through each of the gills. Amphibians also retain the fifth connecting vessel, so that the aorta has two parallel arches") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010213") AnnotationAssertion( "BTO:0000135") AnnotationAssertion( "CALOHA:TS-0046") AnnotationAssertion( "EFO:0000265") AnnotationAssertion( "EMAPA:18601") AnnotationAssertion( "EV:0100027") AnnotationAssertion( "FMA:3734") AnnotationAssertion( "GAID:469") AnnotationAssertion( "MA:0000062") AnnotationAssertion( "MAT:0000035") AnnotationAssertion( "MESH:D001011") AnnotationAssertion( "MIAA:0000035") AnnotationAssertion( "NCIT:C12669") AnnotationAssertion( "OpenCyc:Mx4rvVjvTpwpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Aorta") "UMLS:C0003483") AnnotationAssertion( "VHOG:0001523") AnnotationAssertion( "XAO:0003010") AnnotationAssertion( "galen:Aorta") AnnotationAssertion( "trunk of aortic tree") AnnotationAssertion( "trunk of systemic arterial tree") AnnotationAssertion(Annotation( ) Annotation( "ZFA:0000014") Annotation( ) "dorsal aorta") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "arteria maxima") AnnotationAssertion( "UBERON:0000947") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "aorta") AnnotationAssertion( "Aorta:scheme.jpg"^^xsd:anyURI) SubClassOf(Annotation( "MA"^^xsd:string) ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (heart) AnnotationAssertion(Annotation( ) Annotation( ) "A myogenic muscular circulatory organ found in the vertebrate cardiovascular system composed of chambers of cardiac muscle. It is the primary circulatory organ.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0000114") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "Blood pumping organ composed of four chambers: sinus venosus, atrium, cardiac ventricle and bulbus arteriosus.[TAO]") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0010210") Annotation( "AAO"^^xsd:string) Annotation( "AAO:BJB"^^xsd:string) "Part of the circulatory system responsible for pumping blood; composed of three chambers--two atria and one ventricle.[AAO]") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0010210") Annotation( "AAO"^^xsd:string) "relationship type change: differentiates_from lateral plate mesoderm (AAO:0010574) CHANGED TO: develops_from lateral plate mesoderm (UBERON:0003081)[AAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000276") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0072528305 Kardong KV, Vertebrates: Comparative Anatomy, Function, Evolution (2006) p.481") "As noted, the hearts of birds and mammals have four chambers that arises from the two chambers (atrium and ventricle) of the fish heart.[well established][VHOG]") AnnotationAssertion( "cardiac") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010210") AnnotationAssertion( "BILA:0000020") AnnotationAssertion( "BTO:0000562") AnnotationAssertion( "CALOHA:TS-0445") AnnotationAssertion( "EFO:0000815") AnnotationAssertion( "EHDAA2:0000738") AnnotationAssertion( "EHDAA:420") AnnotationAssertion( "EMAPA:16105") AnnotationAssertion( "EV:0100018") AnnotationAssertion( "FMA:7088") AnnotationAssertion( "GAID:174") AnnotationAssertion( "MA:0000072") AnnotationAssertion( "MAT:0000036") AnnotationAssertion( "MESH:D006321") AnnotationAssertion( "MIAA:0000036") AnnotationAssertion( "NCIT:C12727") AnnotationAssertion( "OpenCyc:Mx4rvVjvDpwpEbGdrcN5Y29ycA") AnnotationAssertion( "TAO:0000114") AnnotationAssertion(Annotation( "ncithesaurus:Heart") "UMLS:C0018787") AnnotationAssertion( "VHOG:0000276") AnnotationAssertion( "XAO:0000064") AnnotationAssertion( "ZFA:0000114") AnnotationAssertion( "galen:Heart") AnnotationAssertion(Annotation( ) "chambered heart") AnnotationAssertion( "vertebrate heart") AnnotationAssertion(Annotation( ) "branchial heart") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "EMAPA:16105") "cardium") AnnotationAssertion( "UBERON:0000948") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "Taxon notes:\" the ascidian tube-like heart lacks chambers....The ascidian heart is formed after metamorphosis as a simple tube-like structure with a single-layered myoepithelium that is continuous with a single-layered pericar- dial wall. It lacks chambers and endocardium.... The innovation of the chambered heart was a key event in vertebrate evolution, because the chambered heart generates one-way blood flow with high pressure, a critical requirement for the efficient blood supply of large-body vertebrates... all extant vertebrates have hearts with two or more chambers (Moorman and Christoffels 2003)\" DOI:10.1101/gad.1485706") AnnotationAssertion(rdfs:label "heart") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "MA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (endocrine system) AnnotationAssertion(Annotation( ) Annotation( "NLM:endocrine+system") "Anatomical system that consists of the glands and parts of glands that produce endocrine secretions and help to integrate and control bodily metabolic activity.") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0010279") Annotation( "AAO"^^xsd:string) Annotation( "AAO:BJB"^^xsd:string) "Anatomical system containing glands which regulates bodily functions though the secretion of hormones.[AAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000098") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "DOI:10.1073/pnas.0812138106 Markov GV, Tavares R, Dauphin-Villemant C, Demeneix BA, Baker ME, Laudet V, Independent elaboration of steroid hormone signaling pathways in metazoans. PNAS (2009)") "Multicellular organisms have complex endocrine systems, allowing responses to environmental stimuli, regulation of development, reproduction, and homeostasis. Nuclear receptors (NRs), a metazoan-specific family of ligand-activated transcription factors, play central roles in endocrine responses, as intermediates between signaling molecules and target genes. The NR family includes ligand-bound and orphan receptors, that is, receptors with no known ligand or for which there is no ligand Pocket. Understanding NR evolution has been further improved by comparison of several completed genomes, particularly those of deuterostomes and ecdysozoans. In contrast, evolution of NR ligands is still much debated. One hypothesis proposes that several independent gains and losses of ligand-binding ability in NRs occurred in protostomes and deuterostomes. A second hypothesis, pertaining to the NR3 subfamily (vertebrate steroid hormone receptors and estrogen related receptor), proposes that before the divergence of protostomes and deuterostomes, there was an ancestral steroid receptor (AncSR) that was ligand-activated and that orphan receptors secondarily lost the ability to bind a ligand. (...) Our analysis reveals that steroidogenesis has been independently elaborated in the 3 main bilaterian lineages (...).[well established][VHOG]") AnnotationAssertion( "endocrine") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010279") AnnotationAssertion( "CALOHA:TS-1301") AnnotationAssertion( "EFO:0002969") AnnotationAssertion( "EHDAA2:0002224") AnnotationAssertion( "EMAPA:35306") AnnotationAssertion( "EV:0100128") AnnotationAssertion( "FBbt:00005068") AnnotationAssertion( "FMA:9668") AnnotationAssertion( "GAID:439") AnnotationAssertion( "MA:0000012") AnnotationAssertion( "MESH:D004703") AnnotationAssertion( "NCIT:C12705") AnnotationAssertion( "TAO:0001158") AnnotationAssertion(Annotation( "ncithesaurus:Endocrine_System") "UMLS:C0014136") AnnotationAssertion( "VHOG:0000098") AnnotationAssertion( "XAO:0000158") AnnotationAssertion( "ZFA:0001158") AnnotationAssertion(Annotation( "EHDAA2:0002224") "endocrine glandular system") AnnotationAssertion( "endocrine system") AnnotationAssertion( "systema endocrinum") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0000949") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "endocrine system") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses( ) DisjointClasses( ) DisjointClasses( ) DisjointClasses( ) DisjointClasses( ) DisjointClasses( ) DisjointClasses( ) DisjointClasses( ) DisjointClasses( ) DisjointClasses( ) DisjointClasses( ) DisjointClasses( ) DisjointClasses( ) DisjointClasses( ) DisjointClasses( ) DisjointClasses( ) # Class: (gracilis) AnnotationAssertion(Annotation( ) "The most superficial muscle on the medial side of the thigh. It is thin and flattened, broad above, narrow and tapering below. It arises by a thin aponeurosis from the anterior margins of the lower half of the symphysis pubis and the upper half of the pubic arch.") AnnotationAssertion( "AAO has minor and major gracilis, which merge together, attaching the pelvic rim to the tibiofibula - this could be grouped with the mammalian gracilis at some level; note the current insertion site is 'tibia' which would be modified for amphibian tibiafibula") AnnotationAssertion( "A&P heads in rat, single head in humans[DOI:10.1002/ar.22919]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0000536") AnnotationAssertion( "EMAPA:36231") AnnotationAssertion( "FMA:43882") AnnotationAssertion( "MA:0002311") AnnotationAssertion( "NCIT:C52935") AnnotationAssertion( "OpenCyc:Mx4rv7If8pwpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Gracilis") "UMLS:C0224439") AnnotationAssertion( "galen:Gracilis") AnnotationAssertion(Annotation( "BTO:0000536") "gracilis muscle") AnnotationAssertion(Annotation( ) Annotation( ) "musculus gracilis") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0000950") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "gracilis") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/e/e2/Anterior_Hip_Muscles_2.PNG"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "Wikipedia"^^xsd:string) ) SubClassOf(Annotation( "pes anserinus") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (rotator muscle of the vertebral column) AnnotationAssertion(Annotation( ) "Any of a number of short transversospinal muscles chiefly developed in cervical, lumbar, and thoracic regions, arising from the transverse process of one vertebra and inserted into the root of the spinous process of the next two or three vertebrae above, with nerve supply from the dorsal branches of the spinal nerve, and whose actions rotate the vertebral column.") AnnotationAssertion(Annotation( "FMA:23081") "rotator muscle") AnnotationAssertion( ) AnnotationAssertion( "FMA:23081") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0000951") AnnotationAssertion(rdfs:label "rotator muscle of the vertebral column") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete adductor muscle) AnnotationAssertion( "UBERON:0011144") AnnotationAssertion( "UBERON:0011145") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0000952") AnnotationAssertion(rdfs:comment "obsoleted as it conflated a generic functional grouping with a specific group of muscles in the leg/hip") AnnotationAssertion(rdfs:label "obsolete adductor muscle") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete visceral muscle) AnnotationAssertion(Annotation( ) "Involuntary non-striated muscle.") AnnotationAssertion( "GO uses visceral and smooth interchangeably") AnnotationAssertion( ) AnnotationAssertion( "smooth muscle") AnnotationAssertion( "uberon") AnnotationAssertion( "adult visceral muscle") AnnotationAssertion( "UBERON:0000953") AnnotationAssertion(rdfs:label "obsolete visceral muscle") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete intestine muscle) AnnotationAssertion(Annotation( "WB:Paper00000653") "Intestinal muscle cell, attach to intestine and body wall anterior to anus.") AnnotationAssertion( "FBbt:00003537") AnnotationAssertion( "WBbt:0005796") AnnotationAssertion( "intestinal muscle") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0000954") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "obsolete intestine muscle") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (brain) AnnotationAssertion(Annotation( ) Annotation( ) "The brain is the center of the nervous system in all vertebrate, and most invertebrate, animals. Some primitive animals such as jellyfish and starfish have a decentralized nervous system without a brain, while sponges lack any nervous system at all. In vertebrates, the brain is located in the head, protected by the skull and close to the primary sensory apparatus of vision, hearing, balance, taste, and smell[WP].") AnnotationAssertion( "requires review for applicability to invertebrate structures, e.g. synganglion") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0000008") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "Cavitated compound organ which is comprised of gray and white matter and surrounds the cerebral ventricular system.[TAO]") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0010478") Annotation( "AAO"^^xsd:string) Annotation( "AAO:BJB"^^xsd:string) "Part of the central nervous system situated within the cranium and composed of both nerve cell bodies and nerve fibers.[AAO]") AnnotationAssertion(Annotation( ) "The part of the central nervous system contained within the cranium, comprising the forebrain, midbrain, hindbrain, and metencephalon. It is derived from the anterior part of the embryonic neural tube (or the encephalon). Does not include retina. (CUMBO)") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000157") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0030223693 Liem KF, Bemis WE, Walker WF, Grande L, Functional Anatomy of the Vertebrates: An Evolutionary Perspective (2001) p.28, ISBN:978-0072528305 Kardong KV, Vertebrates: Comparative Anatomy, Function, Evolution (2006) p.165") "(...) at some stage of its development, every chordate exhibits five uniquely derived characters or synapomorphies of the group: (...) (4) a single, tubular nerve cord that is located dorsal to the notochord (...) (reference 1); The neural tube is destined to differentiate into the brain and spinal cord (the central nervous system) (reference 2).[well established][VHOG]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010478") AnnotationAssertion( "ABA:Brain") AnnotationAssertion( "BAMS:Br") AnnotationAssertion( "BAMS:Brain") AnnotationAssertion( "BILA:0000135") AnnotationAssertion( "BIRNLEX:796") AnnotationAssertion( "BTO:0000142") AnnotationAssertion( "CALOHA:TS-0095") AnnotationAssertion( "DHBA:10155") AnnotationAssertion( "EFO:0000302") AnnotationAssertion( "EHDAA2:0000183") AnnotationAssertion( "EHDAA:2641") AnnotationAssertion( "EHDAA:6485") AnnotationAssertion( "EMAPA:16894") AnnotationAssertion( "EV:0100164") AnnotationAssertion( "FBbt:00005095") AnnotationAssertion( "FMA:50801") AnnotationAssertion( "GAID:571") AnnotationAssertion( "HBA:4005") AnnotationAssertion( "MA:0000168") AnnotationAssertion( "MAT:0000098") AnnotationAssertion( "MBA:8") AnnotationAssertion( "MBA:997") AnnotationAssertion( "MESH:D001921") AnnotationAssertion( "MIAA:0000098") AnnotationAssertion( "NCIT:C12439") AnnotationAssertion( "OpenCyc:Mx4rvVjT65wpEbGdrcN5Y29ycA") AnnotationAssertion( "PBA:3999") AnnotationAssertion( "TAO:0000008") AnnotationAssertion(Annotation( "BIRNLEX:796") "UMLS:C0006104") AnnotationAssertion(Annotation( "ncithesaurus:Brain") "UMLS:C0006104") AnnotationAssertion(Annotation( "BIRNLEX:796") "UMLS:C1269537") AnnotationAssertion( "VHOG:0000157") AnnotationAssertion( "XAO:0000010") AnnotationAssertion( "ZFA:0000008") AnnotationAssertion( "galen:Brain") AnnotationAssertion(Annotation( "BIRNLEX:796") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=21") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0000142") "encephalon") AnnotationAssertion(Annotation( "NeuroNames:21") "suprasegmental levels of nervous system") AnnotationAssertion(Annotation( "NeuroNames:21") "suprasegmental structures") AnnotationAssertion( "synganglion") AnnotationAssertion(Annotation( "NeuroNames:21") "the brain") AnnotationAssertion( "UBERON:0000955") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "brain") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "Bgee:AN"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (cerebral cortex) AnnotationAssertion(Annotation( "BIRNLEX:1494") "The thin layer of gray matter on the surface of the cerebral hemisphere that develops from the telencephalon. It consists of the neocortex (6 layered cortex or isocortex), the hippocampal formation and the olfactory cortex.") AnnotationAssertion( "We follow NIFSTD in defining cerebral cortex and including both neocortex and hippocampal formation (DG+hippocampus).") AnnotationAssertion( ) AnnotationAssertion(Annotation( ) "The cerebral cortex is a structure within the brain that plays a key role in memory, attention, perceptual awareness, thought, language, and consciousness. It constitutes the outermost layer of the cerebrum. In preserved brains, it has a grey color, hence the name 'grey matter'. Grey matter is formed by neurons and their unmyelinated fibers, whereas the white matter below the grey matter of the cortex is formed predominantly by myelinated axons interconnecting different regions of the central nervous system. The human cerebral cortex is 2-4 mm (0.08-0.16 inches) thick. The surface of the cerebral cortex is folded in large mammals, such that more than two-thirds of the cortical surface is buried in the grooves, called 'sulci. ' The phylogenetically most recent part of the cerebral cortex, the neocortex, also called isocortex, is differentiated into six horizontal layers; the more ancient part of the cerebral cortex, the hippocampus (also called archicortex), has at most three cellular layers, and is divided into subfields. Relative variations in thickness or cell type (among other parameters) allow us to distinguish between different neocortical architectonic fields. The geometry of at least some of these fields seems to be related to the anatomy of the cortical folds, and, for example, layers in the upper part of the cortical ridges seem to be more clearly differentiated than in its deeper parts. [WP,unvetted][Wikipedia:Cerebral_cortex].") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000722") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "DOI:10.1111/j.1749-6632.1969.tb20437.x Kruger L, Experimental analyses of the reptilian nervous system. Annals of the New York Academy of Sciences (1969)") "Migration of neurons from the basal or striatal portions of the anterior part of the neural tube occurs to varying degrees in different vertebrate classes, but a true cerebral cortex is generally acknowledged to have made its first appearance in reptiles. The definition can be unambiguous, since 'cortex' simply implies the existence of a surface neuronal layer with an overlying 'zonal lamina' or 'molecular' layer containing dendrites and axons, which is separated from the underlying basal 'matrix' by white matter. Although reptilian cerebral cortex does indeed fulfill these conditions in certain locations, the separation from striatal structures is often indistinct, so that it may even be argued that some primitive dipnoans possess a pallium or cortex. Nevertheless, an extensive laminated layer separated by underlying white matter is well represented only in reptiles and mammals.[well established][VHOG]") AnnotationAssertion( "hagfishes have independently evolved a highly laminated cerebral cortex, comparable in many ways to the cerebral cortex of mammals [http://icb.oxfordjournals.org/content/42/4/743]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:C") AnnotationAssertion( "BAMS:CTX") AnnotationAssertion( "BAMS:Cerebral_cortex") AnnotationAssertion( "BAMS:Cx") AnnotationAssertion( "BIRNLEX:1494") AnnotationAssertion( "BM:Tel-Cx") AnnotationAssertion( "BTO:0000233") AnnotationAssertion( "CALOHA:TS-0091") AnnotationAssertion( "DHBA:10159") AnnotationAssertion( "EFO:0000328") AnnotationAssertion( "EHDAA2:0000234") AnnotationAssertion( "EHDAA:5464") AnnotationAssertion( "EMAPA:17544") AnnotationAssertion( "EV:0100166") AnnotationAssertion( "FMA:61830") AnnotationAssertion( "GAID:629") AnnotationAssertion( "HBA:4008") AnnotationAssertion( "MA:0000185") AnnotationAssertion( "MAT:0000108") AnnotationAssertion( "MBA:688") AnnotationAssertion( "MESH:A08.186.211.730.885.213") AnnotationAssertion( "MIAA:0000108") AnnotationAssertion( "NCIT:C12443") AnnotationAssertion( "PBA:128011354") AnnotationAssertion(Annotation( "BIRNLEX:1494") "UMLS:C0007776") AnnotationAssertion(Annotation( "ncithesaurus:Cortex") "UMLS:C0007776") AnnotationAssertion( "VHOG:0000722") AnnotationAssertion(Annotation( "BIRNLEX:1494") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=39") AnnotationAssertion(Annotation( "BTO:0000233") Annotation( "FMA:61830") "cortex of cerebral hemisphere") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0000233") "brain cortex") AnnotationAssertion(Annotation( "NeuroNames:39") Annotation( ) "cortex cerebralis") AnnotationAssertion(Annotation( ) Annotation( ) "cortex cerebri") AnnotationAssertion(Annotation( "NeuroNames:39") "cortical plate (CTXpl)") AnnotationAssertion(Annotation( "NeuroNames:39") "cortical plate (areas)") AnnotationAssertion(Annotation( "BTO:0000233") "pallium of the brain") AnnotationAssertion( "UBERON:0000956") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "cerebral cortex") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/7/7b/Cerebral_Cortex_location.jpg"^^xsd:anyURI) AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/9/9a/Brainmaps-macaque-hippocampus.jpg"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf(Annotation( "GO"^^xsd:string) Annotation( "ISBN:0471888893"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA"^^xsd:string) Annotation( "MA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lamina) AnnotationAssertion(Annotation( ) "Any thin layer or plate.") AnnotationAssertion( "TODO - merge with cell layer?") AnnotationAssertion( "laminar") AnnotationAssertion( ) AnnotationAssertion( "laminar tissue") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0000957") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "lamina") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/8/80/Laminaarcusvertebrae.png"^^xsd:anyURI) SubClassOf( ) # Class: (medulla of organ) AnnotationAssertion(Annotation( ) "Middle part of an organ, surrounded by the cortex.") AnnotationAssertion( "this class is used in a very general sense") AnnotationAssertion( "medullary") AnnotationAssertion( "FMA:61108") AnnotationAssertion( "galen:Medulla") AnnotationAssertion(Annotation( "FMA:61108") "medulla") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0000958") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "medulla of organ") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (optic chiasma) AnnotationAssertion(Annotation( ) Annotation( ) Annotation( "MGI:llw2") Annotation( "MP:0009770") "A decussation of the diencephalon where the fibers of the optic nerve cross.") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0010622") Annotation( "AAO"^^xsd:string) Annotation( "AAO:DSM") "The point at which fibers of the optic nerves cross.[AAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000190") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "DOI:10.1016/j.preteyeres.2005.04.005 Jeffery G, Erskine L, Variations in the architecture and development of the vertebrate optic chiasm. Progress in retinal and eye research (2005)") "The chiasm has been studied in great detail in some animals, while in others relatively little or nothing is known. Although there are some gross architectural features that are conserved within some animals, such as birds and fish, the general picture is one of diversity. This review will attempt to consider the key features of such diversity of chiasmatic organisation in vertebrates and the mechanisms that sculpt them from the limited literature that is available. However, as so much research has been undertaken on the structure and development of the chiasm in laboratory animals, any review must consider the information that has been gleaned from them and hope that future studies will determine whether the features revealed in these animals, and the underlying mechanisms that generate them, have a common vertebrate plan.[uncertain][VHOG]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010622") AnnotationAssertion( "BAMS:DC") AnnotationAssertion( "BAMS:OC") AnnotationAssertion( "BAMS:och") AnnotationAssertion( "BAMS:ox") AnnotationAssertion( "BIRNLEX:1416") AnnotationAssertion( "BM:Tel-OCX") AnnotationAssertion( "DHBA:10644") AnnotationAssertion( "DMBA:17783") AnnotationAssertion( "EHDAA2:0001302") AnnotationAssertion( "EHDAA:10227") AnnotationAssertion( "EMAPA:17603") AnnotationAssertion( "FMA:62045") AnnotationAssertion( "GAID:832") AnnotationAssertion( "HBA:9310") AnnotationAssertion( "MA:0001098") AnnotationAssertion( "MBA:117") AnnotationAssertion( "MESH:D009897") AnnotationAssertion( "NCIT:C90609") AnnotationAssertion( "TAO:0000556") AnnotationAssertion(Annotation( "BIRNLEX:1416") "UMLS:C0029126") AnnotationAssertion(Annotation( "ncithesaurus:Optic_Chiasm") "UMLS:C0029126") AnnotationAssertion( "VHOG:0000190") AnnotationAssertion( "XAO:0004071") AnnotationAssertion( "ZFA:0000556") AnnotationAssertion(Annotation( "BIRNLEX:1416") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=459") AnnotationAssertion(Annotation( ) Annotation( ) "chiasma opticum") AnnotationAssertion(Annotation( "FMA:62045") "decussation of optic nerve fibers") AnnotationAssertion(Annotation( ) "optic chiasm") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:459") Annotation( ) "chiasma") AnnotationAssertion(Annotation( "NeuroNames:459") Annotation( ) "chiasma nervorum opticorum") AnnotationAssertion(Annotation( "NeuroNames:459") "optic chiasm (Rufus of Ephesus)") AnnotationAssertion( "UBERON:0000959") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "optic chiasma") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/b/b3/1543%2CVisalius%27OpticChiasma.jpg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete pharyngeal nerve) AnnotationAssertion(Annotation( ) "OBSOLETE. Original definition: The pharyngeal nerve (pterygopalatine nerve) is a small branch arising from the posterior part of the pterygopalatine ganglion. It passes through the pharyngeal canal with the pharyngeal branch of the maxillary artery, and is distributed to the mucous membrane of the nasal part of the pharynx, behind the auditory tube. [WP,unvetted].") AnnotationAssertion( "FBbt:00004021") AnnotationAssertion( "FMA:77524") AnnotationAssertion( "WBbt:0005441") AnnotationAssertion( ) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0000960") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "obsolete pharyngeal nerve") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/d/d7/Gray780.png"^^xsd:anyURI) # Class: (thoracic ganglion) AnnotationAssertion(Annotation( ) "The thoracic ganglia are paravertebral ganglia. The thoracic portion of the sympathetic trunk typically has 12 thoracic ganglia. Emerging from the ganglia are thoracic splancic nerves (the cardiopulmonary, the greater, lesser, and least splanchic nerves) that help provide sympathetic innervation to abdominal structures. Also, the ganglia of the thoracic sympathetic trunk have both white and gray rami communicantes. The white rami carry sympathetic fibers arising in the spinal cord into the sympathetic trunk. [WP,unvetted].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0001831") AnnotationAssertion( "EHDAA:4664") AnnotationAssertion( "EMAPA:17158") AnnotationAssertion( "FMA:6471") AnnotationAssertion( "MA:0001159") AnnotationAssertion( "NCIT:C52829") AnnotationAssertion( "RETIRED_EHDAA2:0002012") AnnotationAssertion(Annotation( "ncithesaurus:Thoracic_Ganglion") "UMLS:C0229010") AnnotationAssertion( "VHOG:0000515") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "ganglion of thorax") AnnotationAssertion(Annotation( "FMA:6471") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "ganglion thoracicum splanchnicum") AnnotationAssertion(Annotation( "MA:0001159") "thoracic paravertebral ganglion") AnnotationAssertion( "thoracic splanchnic ganglion") AnnotationAssertion( "thoracic sympathetic ganglion") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "thorax ganglion") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0000961") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "thoracic ganglion") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/3/3e/Gray849.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (nerve of cervical vertebra) AnnotationAssertion(Annotation( ) "The cervical nerves are the spinal nerves from the cervical vertebrae. Although there are seven cervical vertebrae (C1-C7), there are eight cervical nerves (C1-C8). All nerves except C8 emerge above their corresponding vertebrae, while the C8 nerve emerges below the C7 vertebra. (In the other portions of the spine, the nerve emerges below the vertebra with the same name. Dorsal (posterior) distribution includes the greater occipital (C2) and third occipital (C3). Ventral (anterior) distribution includes the cervical plexus (C1-C4) and brachial plexus (C5-C8) [WP,unvetted].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:cern") AnnotationAssertion( "FMA:5859") AnnotationAssertion( "NCIT:C32299") AnnotationAssertion( "NLXANAT:20090207") AnnotationAssertion(Annotation( "ncithesaurus:Cervical_Nerve") "UMLS:C0228815") AnnotationAssertion(Annotation( "FMA:5859") "cervical nerve") AnnotationAssertion( "cervical nerve tree") AnnotationAssertion( "cervical spinal nerve") AnnotationAssertion(Annotation( "FMA:5859") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "nervus cervicalis") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0000962") AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "Innervates: sternohyoid muscle, sternothyroid muscle, omohyoid muscle[WP]") AnnotationAssertion(rdfs:label "nerve of cervical vertebra") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/e/e6/Gray795.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (cornea) AnnotationAssertion(Annotation( "ISBN:0-683-40008-8"^^xsd:string) Annotation( "MESH:A09.371.060.217") Annotation( "MP:0001312") "The transparent anterior portion of the fibrous coat of the eye that serves as the chief refractory structure.") AnnotationAssertion( "corneal") AnnotationAssertion( "Compared to terrestial animals, the cornea of zebrafish is relatively flat. It consists of nonpigmented, stratified squamous nonkeratinizing epithelial cells, attached to a thick basement membrane that is considered to be analogous to the Bowman's membrane in mammals. In fish, and aquatic vertebrates in general, the cornea plays no role in focusing light, since it has virtually the same refractive index as water") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010344") AnnotationAssertion( "BTO:0000286") AnnotationAssertion( "CALOHA:TS-0171") AnnotationAssertion( "EFO:0000377") AnnotationAssertion( "EHDAA2:0000316") AnnotationAssertion( "EHDAA:10199") AnnotationAssertion( "EMAPA:17161") AnnotationAssertion( "EV:0100341") AnnotationAssertion( "FMA:58238") AnnotationAssertion( "GAID:892") AnnotationAssertion( "MA:0000266") AnnotationAssertion( "MESH:D003315") AnnotationAssertion( "NCIT:C12342") AnnotationAssertion( "OpenCyc:Mx4rvViBa5wpEbGdrcN5Y29ycA") AnnotationAssertion( "TAO:0000640") AnnotationAssertion(Annotation( "ncithesaurus:Cornea") "UMLS:C0010031") AnnotationAssertion( "VHOG:0000164") AnnotationAssertion( "XAO:0000180") AnnotationAssertion( "ZFA:0000640") AnnotationAssertion(Annotation( "GO:0061303") "cornea of camera-type eye") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "ZFA:0000640") Annotation( ) "corneas") AnnotationAssertion( "tunica cornea") AnnotationAssertion( "UBERON:0000964") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "cornea") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/1/1e/Schematic_diagram_of_the_human_eye_en.svg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "MA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "MA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA-isa") ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "definitional"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lens of camera-type eye) AnnotationAssertion(Annotation( ) Annotation( ) "Transparent part of camera-type eye that helps to refract light to be focused on the retina.") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000169") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "DOI:10.1038/nrn2283 Lamb TD, Collin SP and Pugh EN Jr, Evolution of the vertebrate eye: opsins, photoreceptors, retina and eye cup. Nature Reviews Neuroscience (2007)") "The eye of the adult lamprey is remarkably similar to our own, and it possesses numerous features (including the expression of opsin genes) that are very similar to those of the eyes of jawed vertebrates. The lamprey's camera-like eye has a lens, an iris and extra-ocular muscles (five of them, unlike the eyes of jawed vertebrates, which have six), although it lacks intra-ocular muscles. Its retina also has a structure very similar to that of the retinas of other vertebrates, with three nuclear layers comprised of the cell bodies of photoreceptors and bipolar, horizontal, amacrine and ganglion cells. The southern hemisphere lamprey, Geotria australis, possesses five morphological classes of retinal photoreceptor and five classes of opsin, each of which is closely related to the opsins of jawed vertebrates. Given these similarities, we reach the inescapable conclusion that the last common ancestor of jawless and jawed vertebrates already possessed an eye that was comparable to that of extant lampreys and gnathostomes. Accordingly, a vertebrate camera-like eye must have been present by the time that lampreys and gnathostomes diverged, around 500 Mya.[well established][VHOG]") AnnotationAssertion( "This class excludes compound eye corneal lenses.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010348") AnnotationAssertion( "BTO:0000723") AnnotationAssertion( "CALOHA:TS-0545") AnnotationAssertion( "EHDAA:9057") AnnotationAssertion( "EMAPA:17838") AnnotationAssertion( "EV:0100343") AnnotationAssertion( "FMA:58241") AnnotationAssertion( "MA:0000275") AnnotationAssertion( "MAT:0000141") AnnotationAssertion( "MESH:A09.371.509") AnnotationAssertion( "MIAA:0000141") AnnotationAssertion( "NCIT:C12743") AnnotationAssertion( "OpenCyc:Mx4rvVj0fZwpEbGdrcN5Y29ycA") AnnotationAssertion( "RETIRED_EHDAA2:0000975") AnnotationAssertion( "TAO:0000035") AnnotationAssertion(Annotation( "ncithesaurus:Crystalline_Lens") "UMLS:C0023317") AnnotationAssertion( "VHOG:0000169") AnnotationAssertion( "XAO:0000008") AnnotationAssertion( "ZFA:0000035") AnnotationAssertion(Annotation( "GO:0002088") "camera-type eye lens") AnnotationAssertion(Annotation( ) "eye lens") AnnotationAssertion(Annotation( ) "lens") AnnotationAssertion(Annotation( ) "lens crystallina") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0000723") "crystalline lens") AnnotationAssertion(Annotation( "ZFA:0000035") Annotation( ) "lenses") AnnotationAssertion(Annotation( "BTO:0000723") "ocular lens") AnnotationAssertion( "UBERON:0000965") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "The lens is avascular and nourished by diffusion from the aqueous and vitreous") AnnotationAssertion(rdfs:label "lens of camera-type eye") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (retina) AnnotationAssertion(Annotation( ) Annotation( "ZFIN:curator"^^xsd:string) "The retina is the innermost layer or coating at the back of the eyeball, which is sensitive to light and in which the optic nerve terminates.") AnnotationAssertion( ) AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0000152") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "The portion of the eye developing from the optic primordium and including the neural retina and the retinal pigment layer. Kimmel et al, 1995.[TAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000229") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "DOI:10.1038/nrn2283 Lamb TD, Collin SP and Pugh EN Jr, Evolution of the vertebrate eye: opsins, photoreceptors, retina and eye cup. Nature Reviews Neuroscience (2007)") "The eye of the adult lamprey is remarkably similar to our own, and it possesses numerous features (including the expression of opsin genes) that are very similar to those of the eyes of jawed vertebrates. The lamprey's camera-like eye has a lens, an iris and extra-ocular muscles (five of them, unlike the eyes of jawed vertebrates, which have six), although it lacks intra-ocular muscles. Its retina also has a structure very similar to that of the retinas of other vertebrates, with three nuclear layers comprised of the cell bodies of photoreceptors and bipolar, horizontal, amacrine and ganglion cells. The southern hemisphere lamprey, Geotria australis, possesses five morphological classes of retinal photoreceptor and five classes of opsin, each of which is closely related to the opsins of jawed vertebrates. Given these similarities, we reach the inescapable conclusion that the last common ancestor of jawless and jawed vertebrates already possessed an eye that was comparable to that of extant lampreys and gnathostomes. Accordingly, a vertebrate camera-like eye must have been present by the time that lampreys and gnathostomes diverged, around 500 Mya.[well established][VHOG]") AnnotationAssertion( "retinal") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010352") AnnotationAssertion( "BAMS:R") AnnotationAssertion( "BIRNLEX:1153") AnnotationAssertion( "BTO:0001175") AnnotationAssertion( "CALOHA:TS-0865") AnnotationAssertion( "EFO:0000832") AnnotationAssertion( "EHDAA2:0001627") AnnotationAssertion( "EHDAA:4757") AnnotationAssertion( "EMAPA:17168") AnnotationAssertion( "EV:0100348") AnnotationAssertion( "FMA:58301") AnnotationAssertion( "GAID:755") AnnotationAssertion( "MA:0000276") AnnotationAssertion( "MAT:0000142") AnnotationAssertion( "MBA:304325711") AnnotationAssertion( "MESH:D012160") AnnotationAssertion( "MIAA:0000142") AnnotationAssertion( "NCIT:C12343") AnnotationAssertion( "NIFSTD_RETIRED:birnlex_1156") AnnotationAssertion( "OpenCyc:Mx4rvViTfpwpEbGdrcN5Y29ycA") AnnotationAssertion( "TAO:0000152") AnnotationAssertion(Annotation( "BIRNLEX:1153") "UMLS:C0035298") AnnotationAssertion(Annotation( "ncithesaurus:Retina") "UMLS:C0035298") AnnotationAssertion(Annotation( "BIRNLEX:1153") "UMLS:C1278894") AnnotationAssertion( "VHOG:0000229") AnnotationAssertion( "XAO:0000009") AnnotationAssertion( "ZFA:0000152") AnnotationAssertion( "inner layer of eyeball") AnnotationAssertion(Annotation( "GO:0060041") "retina of camera-type eye") AnnotationAssertion( "tunica interna of eyeball") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0001175") "Netzhaut") AnnotationAssertion(Annotation( "ZFA:0000152") Annotation( ) "retinas") AnnotationAssertion( "UBERON:0000966") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "Currently this class encompasses only verteberate AOs but could in theory also include cephalopod - we may want to make a more specific class for vertebrate retina. note that this class excludes ommatidial retinas, as the retina must be part of an eyeball. Use the parent class photoreceptor array / light-sensitive tissue for arthropods") AnnotationAssertion(rdfs:label "retina") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/e/ed/Human_eye_cross-sectional_view_grayscale.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (obsolete adult thoracic sensillum) AnnotationAssertion( "FBbt:00004245") AnnotationAssertion( "MAT:0000205") AnnotationAssertion( "MIAA:0000205") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "arthropod sensillum of thorax") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "sensillum of thorax") AnnotationAssertion( "thoracic sensillum") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "thorax arthropod sensillum") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "thorax sensillum") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0000967") AnnotationAssertion(rdfs:label "obsolete adult thoracic sensillum") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete adult abdominal sensillum) AnnotationAssertion( "FBbt:00004461") AnnotationAssertion( "MAT:0000206") AnnotationAssertion( "MIAA:0000206") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "abdomen arthropod sensillum") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "abdomen sensillum") AnnotationAssertion( "abdominal sensillum") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "arthropod sensillum of abdomen") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "sensillum of abdomen") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0000968") AnnotationAssertion(rdfs:label "obsolete adult abdominal sensillum") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete joint connecting hardened body parts) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0000969") AnnotationAssertion(rdfs:label "obsolete joint connecting hardened body parts") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (eye) AnnotationAssertion(Annotation( ) "An organ that detects light.") AnnotationAssertion( "This class encompasses a variety of light-detecting structures from different phyla with no implication of homology, from the compound insect eye to the vertebrate camera-type eye (distinct classes are provided for each)") AnnotationAssertion( "ocular") AnnotationAssertion( "optic") AnnotationAssertion( "Note that whilst this is classified as an organ, it is in fact more of a unit composed of different structures: in Drosophila, it includes the interommatidial bristle as a part; we consider here the vertebrate eye to include the eyeball/eye proper as a part, with the eye having as parts (when present): eyelids, conjuctiva,") AnnotationAssertion( ) AnnotationAssertion( "BILA:0000017") AnnotationAssertion( "BTO:0000439") AnnotationAssertion( "CALOHA:TS-0309") AnnotationAssertion( "EFO:0000827") AnnotationAssertion( "EV:0100336") AnnotationAssertion( "FBbt:00005162") AnnotationAssertion( "GAID:69") AnnotationAssertion( "MAT:0000140") AnnotationAssertion( "MESH:D005123") AnnotationAssertion( "MIAA:0000140") AnnotationAssertion( "OpenCyc:Mx4rvViTvpwpEbGdrcN5Y29ycA") AnnotationAssertion( "uberon") AnnotationAssertion( "light-detecting organ") AnnotationAssertion(Annotation( "EV:0100336") "visual apparatus") AnnotationAssertion( "UBERON:0000970") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "eye") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete labrum) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0000973") AnnotationAssertion(rdfs:label "obsolete labrum") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (neck) AnnotationAssertion(Annotation( ) "An organism subdivision that extends from the head to the pectoral girdle, encompassing the cervical vertebral column.") AnnotationAssertion( "true necks are considered to be present when the pectoral girdle is separate from the skull - Tiktaalik is the earliest known fish to have a true neck.") AnnotationAssertion(Annotation( "ISBN:9780674021839") ) AnnotationAssertion( "cervical") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AEO:0000108") AnnotationAssertion( "BTO:0000420") AnnotationAssertion( "CALOHA:TS-2045") AnnotationAssertion( "EFO:0000967") AnnotationAssertion( "EHDAA2:0003108") AnnotationAssertion( "EMAPA:35587") AnnotationAssertion( "FMA:7155") AnnotationAssertion( "GAID:86") AnnotationAssertion( "MA:0000024") AnnotationAssertion( "MAT:0000297") AnnotationAssertion( "MESH:D009333") AnnotationAssertion( "MIAA:0000297") AnnotationAssertion( "NCIT:C13063") AnnotationAssertion( "OpenCyc:Mx4rvVjLF5wpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Neck") "UMLS:C0027530") AnnotationAssertion( "galen:Neck") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "collum") AnnotationAssertion(Annotation( "FMA:7155") "neck (volume)") AnnotationAssertion( "UBERON:0000974") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "neck") AnnotationAssertion( "Female:neck.jpg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (sternum) AnnotationAssertion(Annotation( ) Annotation( "PHENOSCAPE:ad"^^xsd:string) "A midventral endochondral skeletal element which represents the origin site of the pectoral muscles[PHENOSCAPE:ad].") AnnotationAssertion( "in EMAPA and EHDAA2 this is part of the skeleton of pectoral girdle; the classic def of pectoral girdle (see WP) excludes the rib cage and sternum") AnnotationAssertion(Annotation( "Wikipedia"^^xsd:string) ) AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0000765") Annotation( "AAO"^^xsd:string) Annotation( "AAO:LAP"^^xsd:string) "Single element that constitutes the postzonal area of the pectoral girdle.[AAO]") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0000765") Annotation( "AAO"^^xsd:string) "relationship loss: part_of postzonal element (AAO:0000938)[AAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000856") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0072528305 Kardong KV, Vertebrates: Comparative Anatomy, Function, Evolution (2006) p.294") "Fishes lack a sternum. (...) A sternum is absent in the first fossil tetrapods, but it is present in modern amphibians. (...) Thus, a sternum occurs in some modern amphibians, birds, mammals and archosaurs. However, its absence in the common ancestors to these groups means that it has arisen independently several times within the field of the midventral connective tissue.[well established][VHOG]") AnnotationAssertion( "sternal") AnnotationAssertion( "It probably first evolved in early tetrapods as an extension of the pectoral girdle; it is not found in fish. In amphibians and reptiles it is typically a shield-shaped structure, often composed entirely of cartilage. It is absent in both turtles and snakes. In birds it is a relatively large bone and typically bears an enormous projecting keel to which the flight muscles are attached. Only in mammals does the sternum take on the elongated, segmented form seen in humans. In some mammals, such as opossums, the individual segments never fuse and remain separated by cartilagenous plates throughout life") AnnotationAssertion( "in birds, either ratite (no keel or carina) or carinate (keel and carina present)") AnnotationAssertion(Annotation( "WP"^^xsd:string) "While its developmental origins are similar to the ribs (from the myospetum and septum of the trunk region), it is often associated with the pectoral skeleton, due to both function and physical connections (i.e. the coracoid of archosaurs). It may be a single element or a series of smaller structure (sternebrae). Based on Kardong 2012. [PHENOSCAPE:ad].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0000765") AnnotationAssertion( "BTO:0001302") AnnotationAssertion( "CALOHA:TS-0972") AnnotationAssertion( "EHDAA2:0001914") AnnotationAssertion( "EHDAA:9561") AnnotationAssertion( "EMAPA:18344") AnnotationAssertion( "FMA:7485") AnnotationAssertion( "GAID:246") AnnotationAssertion( "MA:0001331") AnnotationAssertion( "MESH:D013249") AnnotationAssertion( "NCIT:C12793") AnnotationAssertion( "OpenCyc:Mx4rvVjO6JwpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Sternum") "UMLS:C0038293") AnnotationAssertion( "VHOG:0000856") AnnotationAssertion( "galen:Sternum") AnnotationAssertion( "vertebrate sternum") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0001302") "breastbone") AnnotationAssertion( "UBERON:0000975") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "sternum") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/1/12/Illu_thoracic_cage.jpg"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "ISBN:0073040584"^^xsd:string) ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (humerus) AnnotationAssertion(Annotation( ) Annotation( "AAO:0000679") Annotation( "PHENOSCAPE:mah") "Paired endochondral long bone that extends between the pectoral girdle and the skeletal parts of the forelimb. [PHENOSCAPE:mah].") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0000679") Annotation( "AAO"^^xsd:string) Annotation( "AAO:LAP"^^xsd:string) "Paired, elongate, cylindrical bones of endochondral origin that extend from the pectoral girdle to the elbows.[AAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001158") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0198540472 Janvier P, Early vertebrates (1996) p.268"^^xsd:string) "Most anatomists now agree that the three proximal bones of the tetrapod limbs are homologous to the two or three proximal elements of the paired fin skeleton of other sarcopterygians, that is the humerus-femur, radius-tibia, and ulna-fibula.[well established][VHOG]") AnnotationAssertion( "humeral") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0000679") AnnotationAssertion( "CALOHA:TS-2202") AnnotationAssertion( "EFO:0001398") AnnotationAssertion( "EMAPA:19106") AnnotationAssertion( "FMA:13303") AnnotationAssertion( "GAID:183") AnnotationAssertion( "MA:0001356") AnnotationAssertion( "MESH:A02.835.232.087.412") AnnotationAssertion( "NCIT:C12731") AnnotationAssertion(Annotation( "ncithesaurus:Humerus") "UMLS:C0020164") AnnotationAssertion( "VHOG:0001158") AnnotationAssertion( "XAO:0003210") AnnotationAssertion( "galen:Humerus") AnnotationAssertion(Annotation( "PHENOSCAPE:ad"^^xsd:string) Annotation( ) "humeri") AnnotationAssertion( "humerus bone") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "ISBN:0226313409") Annotation( ) "mesomere 1 of pectoral appendage") AnnotationAssertion(Annotation( "ISBN:0226313409") Annotation( ) "proximal metapterygial mesomere of pectoral appendage") AnnotationAssertion(Annotation( "ISBN:0226313409") Annotation( ) "proximal metapterygial mesomere of pectoral fin") AnnotationAssertion( "UBERON:0000976") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "humerus") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/6/67/Illu_upper_extremity.jpg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) SubClassOf(Annotation( "definitional"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pleura) AnnotationAssertion(Annotation( ) Annotation( ) Annotation( "ISBN:0-683-40008-8"^^xsd:string) Annotation( "MP:0010820") Annotation( "UBERON:cjm"^^xsd:string) "The invaginated serous membrane that surrounds the lungs (the visceral portion) and lines the walls of the pleural cavity (parietal portion).") AnnotationAssertion(Annotation( "BGEE:AN") Annotation( "ISBN:978-0030223693") ) AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000394") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:0124020607") "The serous membrane that covers the lungs and lines the pleural cavity. [Kaufman_MH_and_Bard_JBL, The_anatomical_basis_of_mouse_development_(1999)_San_Diego:_Academic_Press, p.264][VHOG]") AnnotationAssertion( "pleural") AnnotationAssertion( "In MA, is_a cavity lining (which we equate to parietal). In FMA, is_a (viscous) serous membrane (which includes mesothelium plus connective tissue). Note the MA structure should probably be associated with the mesothelium of pleura in FMA. JB/EHDAA2 argues the term 'pleura' is best used for the mesothelial lining (thus excluding connective tissue). See https://github.com/obophenotype/uberon/issues/86") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0001791") AnnotationAssertion( "CALOHA:TS-2081") AnnotationAssertion( "EFO:0001980") AnnotationAssertion( "EMAPA:16775") AnnotationAssertion( "EV:0100044") AnnotationAssertion( "FMA:9583") AnnotationAssertion( "GAID:360") AnnotationAssertion( "MA:0000433") AnnotationAssertion( "MESH:D010994") AnnotationAssertion( "NCIT:C12469") AnnotationAssertion( "OpenCyc:Mx4rv3zwLZwpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Pleural_Tissue") "UMLS:C0032225") AnnotationAssertion( "VHOG:0000394") AnnotationAssertion( "wall of pleural sac") AnnotationAssertion( "uberon") AnnotationAssertion( "pleura") AnnotationAssertion(Annotation( "BTO:0001791") Annotation( "NCIT:C12469") "pleural tissue") AnnotationAssertion( "UBERON:0000977") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "pleura") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/a/ab/Gray965.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (leg) AnnotationAssertion(Annotation( ) "The portion of the hindlimb that contains both the stylopod and zeugopod.") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000345") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0198540472 Janvier P, Early vertebrates (1996) p.268"^^xsd:string) "Most anatomists now agree that the three proximal bones of the tetrapod limbs are homologous to the two or three proximal elements of the paired fin skeleton of other sarcopterygians, that is the humerus-femur, radius-tibia, and ulna-fibula.[well established][VHOG]") AnnotationAssertion(Annotation( "3") "The term leg can mean: [1] an appendage on which an animal walks [2] the entire hindlimb of a tetrapod [3] the segment of a human leg between knee and ankle (cf FMA) [4] the region of a hindlimb include the stylopod and zeugopod, but excluding the autopod. We define this class as [4], and thus 'leg' is compltely analagous to 'arm'. For [1], see the class 'locomotive weight-bearing appendage'. For [2] we use 'hindlimb'. For") AnnotationAssertion( ) AnnotationAssertion( "BTO:0000721") AnnotationAssertion( "CALOHA:TS-2206") AnnotationAssertion( "EFO:0001411") AnnotationAssertion( "EHDAA2:0000972") AnnotationAssertion( "EHDAA:5151") AnnotationAssertion( "EHDAA:6176") AnnotationAssertion( "EHDAA:8289") AnnotationAssertion( "EMAPA:17489") AnnotationAssertion( "GAID:49") AnnotationAssertion( "MA:0000047") AnnotationAssertion( "MESH:D035002") AnnotationAssertion( "OpenCyc:Mx4rvViYzZwpEbGdrcN5Y29ycA") AnnotationAssertion( "VHOG:0000345") AnnotationAssertion( "tetrapod leg") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "MESH:A01.378.610") "lower extremity") AnnotationAssertion( "UBERON:0000978") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "we use the less open to misinterpretation 'hindlimb zeugopod'. Editor note: currently declared as overlapping foot, as AOs disagree over whether some ankle parts are in the leg or foot") AnnotationAssertion(rdfs:label "leg") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (tibia) AnnotationAssertion(Annotation( "PHENOSCAPE:mah") "The major preaxial endochondral bone in the posterior zeugopod[Phenoscape].") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0000890") Annotation( "AAO"^^xsd:string) Annotation( "AAO:LAP"^^xsd:string) "One of the two long bones of endochondral origin of the hind-epipodium; it is a straight, simple bone whose section is more or less rectangular at the ends and circular at its central portion.[AAO]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0000890") AnnotationAssertion( "BTO:0001252") AnnotationAssertion( "CALOHA:TS-1048") AnnotationAssertion( "EFO:0003054") AnnotationAssertion( "EMAPA:19142") AnnotationAssertion( "FMA:24476") AnnotationAssertion( "GAID:204") AnnotationAssertion( "MA:0001361") AnnotationAssertion( "MESH:A02.835.232.500.883") AnnotationAssertion( "NCIT:C12800") AnnotationAssertion( "OpenCyc:Mx4rvtq3-ZwpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Tibia") "UMLS:C0040184") AnnotationAssertion( "galen:Tibia") AnnotationAssertion(Annotation( ) "shankbone") AnnotationAssertion(Annotation( ) "shinbone") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0000979") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "tibia") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/2/2a/Gray260.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (trochanter) AnnotationAssertion(Annotation( "MP:0004627") "A bony prominence near the extremity of the femur that normally serves as attachment points for hip and thigh muscles[MP,modified].") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0000897") Annotation( "AAO"^^xsd:string) Annotation( "AAO:LAP"^^xsd:string) "Process on the ventral surface of the shaft of the femur.[AAO]") AnnotationAssertion(Annotation( "MP"^^xsd:string) "there are two in human (greater and lesser trochanters) and three in many other mammalian species (greater, lesser and third)") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0000897") AnnotationAssertion( "FMA:82513") AnnotationAssertion( "MA:0002821") AnnotationAssertion( "NCIT:C33814") AnnotationAssertion(Annotation( "ncithesaurus:Trochanter") "UMLS:C0162370") AnnotationAssertion(Annotation( "AAO:0000897") "femoral trochanter") AnnotationAssertion( "trochanter of femur") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0000980") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "trochanter") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "MA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (femur) AnnotationAssertion(Annotation( ) Annotation( "VSAO:0000186") "Endochondral longbone connecting the pelvic girdle with posterior zeugopodium skeleton.[VSAO, modified].") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "VSAO:0000186") Annotation( "VSAO"^^xsd:string) Annotation( "VSAO:NI") "Endochondral longbone connecting the pelvic girdle with posterior zeugopodium.[VSAO]") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0000889") Annotation( "AAO"^^xsd:string) Annotation( "AAO:LAP"^^xsd:string) "Paired, elongate, cylindrical bones of endochondral origin that form the thighs, extending from the pelvic girdles to the knees.[AAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001159") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0198540472 Janvier P, Early vertebrates (1996) p.268"^^xsd:string) "Most anatomists now agree that the three proximal bones of the tetrapod limbs are homologous to the two or three proximal elements of the paired fin skeleton of other sarcopterygians, that is the humerus-femur, radius-tibia, and ulna-fibula.[well established][VHOG]") AnnotationAssertion( "femoral") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0000887") AnnotationAssertion( "AAO:0000889") AnnotationAssertion( "BTO:0001284") AnnotationAssertion( "CALOHA:TS-0322") AnnotationAssertion( "EFO:0001396") AnnotationAssertion( "EMAPA:19143") AnnotationAssertion( "FMA:9611") AnnotationAssertion( "GAID:199") AnnotationAssertion( "MA:0001359") AnnotationAssertion( "MESH:A02.835.232.500.247") AnnotationAssertion( "NCIT:C12717") AnnotationAssertion( "OpenCyc:Mx4rvVjOJJwpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Femur") "UMLS:C0015811") AnnotationAssertion( "VHOG:0001159") AnnotationAssertion( "VSAO:0000186") AnnotationAssertion( "XAO:0003214") AnnotationAssertion( "galen:Femur") AnnotationAssertion( "thigh bone") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0001284") "femoral bone") AnnotationAssertion(Annotation( "ISBN:0226313409") Annotation( ) "mesomere 1 of pevlic appendage") AnnotationAssertion(Annotation( "BTO:0001284") Annotation( ) "os femorale") AnnotationAssertion(Annotation( "BTO:0001284") Annotation( ) "os femoris") AnnotationAssertion(Annotation( ) Annotation( ) "os longissimum") AnnotationAssertion(Annotation( "ISBN:0226313409") Annotation( ) "proximal metapterygial mesomere of pelvic appendage") AnnotationAssertion(Annotation( "ISBN:0226313409") Annotation( ) "proximal metapterygial mesomere of pelvic fin") AnnotationAssertion( "UBERON:0000981") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "femur") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/7/73/Gray252.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "MA"^^xsd:string) ) SubClassOf( ) SubClassOf(Annotation( "definitional"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (skeletal joint) AnnotationAssertion(Annotation( ) Annotation( ) Annotation( "GO_REF:0000034"^^xsd:string) Annotation( "VSAO:0000101") "Anatomical cluster that consists of two or more adjacent skeletal structures, which may be interconnected by various types of tissue[VSAO].") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "VSAO:0000101") Annotation( "VSAO"^^xsd:string) Annotation( "PSPUB:0000170"^^xsd:string) "Anatomical cluster that consists of two or more adjacent bones or cartilages, which may be interconnected by various types of tissue.[VSAO]") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0000367") Annotation( "TAO"^^xsd:string) Annotation( "TAO:pem") "Anatomical cluster which consists of two or more adjacent bones or cartilages, which may be interconnected by various types of tissue.[TAO]") AnnotationAssertion(Annotation( "VSAO:0000101") "articulation") AnnotationAssertion(Annotation( "FMA:7490") Annotation( "VSAO:0000101") "joint") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AEO:0000182") AnnotationAssertion( "BTO:0001686") AnnotationAssertion( "CALOHA:TS-2023") AnnotationAssertion( "EFO:0000948") AnnotationAssertion( "EMAPA:35456") AnnotationAssertion( "FMA:7490") AnnotationAssertion( "GAID:102") AnnotationAssertion( "MA:0000319") AnnotationAssertion( "MAT:0000188") AnnotationAssertion( "MESH:D007596") AnnotationAssertion( "MIAA:0000188") AnnotationAssertion( "NCIT:C13044") AnnotationAssertion( "OpenCyc:Mx4rvVjjdpwpEbGdrcN5Y29ycA") AnnotationAssertion( "RETIRED_EHDAA2:0003182") AnnotationAssertion( "TAO:0000367") AnnotationAssertion(Annotation( "ncithesaurus:Joint") "UMLS:C0022417") AnnotationAssertion( "VHOG:0001276") AnnotationAssertion( "VSAO:0000101") AnnotationAssertion( "XAO:0000171") AnnotationAssertion( "ZFA:0001596") AnnotationAssertion( "galen:Joint") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0001686") "articular joint") AnnotationAssertion(Annotation( "ZFA:0001596") Annotation( ) "joints") AnnotationAssertion( "UBERON:0000982") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "skeletal joint") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses( ) # Class: (metatarsus region) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A metapodium region that is part of a pes.") AnnotationAssertion( "mammalian and non-mammalian AOs differ in whether they consider this a part of the skeleton") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "CALOHA:TS-2221") AnnotationAssertion( "FMA:24997") AnnotationAssertion( "MA:0000049") AnnotationAssertion(Annotation( ) Annotation( "AAO:0000221") Annotation( "MA:th"^^xsd:string) "hind metapodium") AnnotationAssertion(Annotation( "FMA:24997") "metatarsal part of foot") AnnotationAssertion(Annotation( "FMA:24997") "metatarsal region") AnnotationAssertion(Annotation( "FMA:24997") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "regio metatarsalis") AnnotationAssertion(Annotation( ) Annotation( "NCBITaxon:9788"^^xsd:string) "hindlimb cannon region") AnnotationAssertion(Annotation( ) Annotation( "NCBITaxon:9788"^^xsd:string) "hindlimb equine cannon region") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "MA:0000049") "metatarsus") AnnotationAssertion( "UBERON:0000983") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "metatarsus region") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "PHENOSCAPE:ni"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (axillary vein) AnnotationAssertion(Annotation( ) "Vein that drains the axilla.") AnnotationAssertion(Annotation( "WP"^^xsd:string) "In human anatomy, the axillary vein is a large blood vessel that conveys blood from the lateral aspect of the thorax, axilla (armpit) and upper limb toward the heart. There is one axillary vein on each side of the body. Its origin is at the lower margin of the teres major muscle and a continuation of the brachial vein. Its tributaries include the basilic vein and cephalic vein, which are both superficial veins. It terminates at the lateral margin of the first rib, at which it becomes the subclavian vein. It is accompanied along its course by a similarly named artery, the axillary artery") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:18758") AnnotationAssertion( "FMA:13329") AnnotationAssertion( "GAID:527") AnnotationAssertion( "MA:0002084") AnnotationAssertion( "MESH:D001367") AnnotationAssertion( "NCIT:C32171") AnnotationAssertion( "OpenCyc:Mx4rwLSHK5wpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Axillary_Vein") "UMLS:C0004456") AnnotationAssertion( "galen:AxillaryVein") AnnotationAssertion(Annotation( ) Annotation( ) "vena axillaris") AnnotationAssertion( "uberon") AnnotationAssertion( "subcostal vein") AnnotationAssertion( "UBERON:0000985") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "axillary vein") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/e/e9/Gray576.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pons) AnnotationAssertion(Annotation( "VHOG:0001176") "The part of the central nervous system lying between the medulla oblongata and the midbrain, ventral to the cerebellum.") AnnotationAssertion( "The pons is not present in zebrafish. In this ontology we currently have some structures which are applicable to zebrafish appearing as parts of the pons. Currently we only include the weaker dubious_for_taxon relationship ubtil this is resolved") AnnotationAssertion( ) AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001176") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( ) "The part of the central nervous system lying between the medulla oblongata and the midbrain, ventral to the cerebellum. [TFD][VHOG]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001176") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0030223693 Liem KF, Bemis WE, Walker WF, Grande L, Functional Anatomy of the Vertebrates: An Evolutionary Perspective (2001) p.474") "During the embryonic development of birds and mammals, neuroblasts migrate from the cerebellum into the ventral part of the rhombencephalon and differentiate into pontine and other nuclei, which relay information from between the cerebrum and cerebellum, and a conspicuous band of transverse fibers. This region is known as the pons. A pons does not differentiate in reptiles and anamniotes (...).[well established][VHOG]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:PONS") AnnotationAssertion( "BAMS:Pons") AnnotationAssertion( "BIRNLEX:733") AnnotationAssertion( "BM:Pons") AnnotationAssertion( "BTO:0001101") AnnotationAssertion( "CALOHA:TS-0813") AnnotationAssertion( "DHBA:10661") AnnotationAssertion( "EFO:0001394") AnnotationAssertion( "EHDAA2:0004394") AnnotationAssertion( "EMAPA:17563") AnnotationAssertion( "EV:0100253") AnnotationAssertion( "FMA:67943") AnnotationAssertion( "GAID:578") AnnotationAssertion( "HBA:9131") AnnotationAssertion( "MA:0000204") AnnotationAssertion( "MAT:0000115") AnnotationAssertion( "MBA:771") AnnotationAssertion( "MESH:D011149") AnnotationAssertion( "MIAA:0000115") AnnotationAssertion( "NCIT:C12511") AnnotationAssertion(Annotation( "BIRNLEX:733") "UMLS:C0032639") AnnotationAssertion(Annotation( "ncithesaurus:Pons_Varolii") "UMLS:C0032639") AnnotationAssertion(Annotation( "BIRNLEX:733") "UMLS:C1280999") AnnotationAssertion( "VHOG:0001176") AnnotationAssertion(Annotation( "BIRNLEX:733") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=547") AnnotationAssertion(Annotation( "ncithesaurus:Pons_Varolii") "pons Varolii") AnnotationAssertion( "pons of Varolius") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:547") Annotation( ) "pons cerebri") AnnotationAssertion( "UBERON:0000988") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "pons") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/3/36/Gray768.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "neuronames") ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (penis) AnnotationAssertion(Annotation( ) Annotation( ) Annotation( "ISBN:0-683-40008-8"^^xsd:string) Annotation( "MP:0005187") "An intromittent organ in certain biologically male organisms. In placental mammals, this also serves as the organ of urination.") AnnotationAssertion( "penile") AnnotationAssertion( "phallic") AnnotationAssertion(Annotation( "WP"^^xsd:string) "Most male birds (e.g., roosters and turkeys) have a cloaca (also present on the female), but not a penis. Among bird species with a penis are paleognathes (tinamous and ratites), Anatidae (ducks, geese and swans), and a very few other species (such as flamingoes). A bird penis is different in structure from mammal penises, being an erectile expansion of the cloacal wall and being erected by lymph, not blood. It is usually partially feathered and in some species features spines and brush-like filaments, and in flaccid state curls up inside the cloaca") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0000405") AnnotationAssertion( "CALOHA:TS-0758") AnnotationAssertion( "EFO:0000987") AnnotationAssertion( "EHDAA2:0001433") AnnotationAssertion( "EHDAA:9380") AnnotationAssertion( "EMAPA:18682") AnnotationAssertion( "EMAPA_RETIRED:18996") AnnotationAssertion( "EV:0100107") AnnotationAssertion( "FMA:9707") AnnotationAssertion( "GAID:389") AnnotationAssertion( "MA:0000408") AnnotationAssertion( "MAT:0000186") AnnotationAssertion( "MESH:D010413") AnnotationAssertion( "MIAA:0000186") AnnotationAssertion( "NCIT:C12409") AnnotationAssertion( "OpenCyc:Mx4rvVjkCZwpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Penis") "UMLS:C0030851") AnnotationAssertion( "VHOG:0000727") AnnotationAssertion( "galen:Penis") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "penes") AnnotationAssertion( "phallus") AnnotationAssertion( "UBERON:0000989") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "penis") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/8/87/Labelled_flaccid_penis.jpg"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "Wikipedia"^^xsd:string) ) SubClassOf(Annotation( "Wikipedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (reproductive system) AnnotationAssertion(Annotation( ) "Anatomical system that has as its parts the organs concerned with reproduction.") AnnotationAssertion( "consider splitting genitalia from reproductive system") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0010258") Annotation( "AAO"^^xsd:string) Annotation( "AAO:BJB"^^xsd:string) "Anatomical system which consists of organs and tissues associated with sexual reproduction of the organism.[AAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000182") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "PMID:21672850 Extavour CGM, Gray anatomy: phylogenetic patterns of somatic gonad structures and reproductive strategies across Bilateria. Integrative and Comparative Biology (2007)") "Arguably, one of the most important aspects of urbilaterian organogenesis would have been gonadogenesis, since Urbilateria must have successfully generated gametes and developed a strategy for extrusion and fertilization, in order to be the ancestor of all living Bilateria.[well established][VHOG]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010258") AnnotationAssertion( "BILA:0000103") AnnotationAssertion( "BTO:0000081") AnnotationAssertion( "CALOHA:TS-1318") AnnotationAssertion( "EFO:0000809") AnnotationAssertion( "EHDAA2:0001603") AnnotationAssertion( "EHDAA:5923") AnnotationAssertion( "EMAPA:17381") AnnotationAssertion( "EV:0100100") AnnotationAssertion( "FBbt:00004857") AnnotationAssertion( "FMA:7160") AnnotationAssertion( "GAID:363") AnnotationAssertion( "HAO:0000374") AnnotationAssertion( "HAO:0000895") AnnotationAssertion( "MA:0000326") AnnotationAssertion( "MIAA:0000305") AnnotationAssertion( "NCIT:C12841") AnnotationAssertion( "OpenCyc:Mx4rvVja4ZwpEbGdrcN5Y29ycA") AnnotationAssertion( "TAO:0000632") AnnotationAssertion(Annotation( "ncithesaurus:Reproductive_System") "UMLS:C1261210") AnnotationAssertion( "VHOG:0000182") AnnotationAssertion( "WBbt:0005747") AnnotationAssertion( "XAO:0000142") AnnotationAssertion( "ZFA:0000632") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0000081") "Geschlechtsorgan") AnnotationAssertion(Annotation( "BTO:0000081") "animal reproductive system") AnnotationAssertion( "genital system") AnnotationAssertion( "genital tract") AnnotationAssertion(Annotation( ) "genitalia") AnnotationAssertion(Annotation( "BTO:0000081") "organa genitalia") AnnotationAssertion(Annotation( "BTO:0000081") "reproductive tissue") AnnotationAssertion( "reproductive tract") AnnotationAssertion(Annotation( ) Annotation( ) "systemata genitalia") AnnotationAssertion( "UBERON:0000990") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "reproductive system") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/5/52/Penis.svg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses( ) DisjointClasses( ) DisjointClasses( ) DisjointClasses( ) DisjointClasses( ) DisjointClasses( ) DisjointClasses( ) DisjointClasses( ) DisjointClasses( ) DisjointClasses( ) DisjointClasses( ) DisjointClasses( ) DisjointClasses( ) DisjointClasses( ) DisjointClasses( ) # Class: (gonad) AnnotationAssertion(Annotation( ) Annotation( "ISBN:0140512888") Annotation( "ZFA:0000413") Annotation( "ZFIN:curator"^^xsd:string) "Reproductive organ that produces and releases eggs (ovary) or sperm (testis).") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0000213") Annotation( "AAO"^^xsd:string) Annotation( "AAO:BJB"^^xsd:string) "Anatomical structure which produces gametes as well as certain sex hormones controlled by the pituitary gonadotropins.[AAO]") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0000413") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "The part of the reproductive system that produces and releases eggs (ovary) or sperm (testis).[TAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000397") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "DOI:10.1146/annurev.cellbio.042308.13350 DeFalco T, Capel B, Gonad morphogenesis in vertebrates: divergent means to a convergent end. Annual review of cell and developmental biology (2009)") "Examination of different vertebrate species shows that the adult gonad is remarkably similar in its morphology across different phylogenetic classes. Surprisingly, however, the cellular and molecular programs employed to create similar organs are not evolutionarily conserved.[uncertain][VHOG]") AnnotationAssertion( "gonadal") AnnotationAssertion(Annotation( "FMA"^^xsd:string) "FMA xref is a 'general anatomical term'") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0000213") AnnotationAssertion( "BILA:0000123") AnnotationAssertion( "BSA:0000079") AnnotationAssertion( "BTO:0000534") AnnotationAssertion( "EMAPA:17383") AnnotationAssertion( "FBbt:00004858") AnnotationAssertion( "FMA:18250") AnnotationAssertion( "GAID:368") AnnotationAssertion( "HAO:0000379") AnnotationAssertion( "MA:0002420") AnnotationAssertion( "MESH:D006066") AnnotationAssertion( "NCIT:C12725") AnnotationAssertion( "OpenCyc:Mx4rwQvdiZwpEbGdrcN5Y29ycA") AnnotationAssertion( "TAO:0000413") AnnotationAssertion(Annotation( "ncithesaurus:Gonad") "UMLS:C0018067") AnnotationAssertion( "VHOG:0000397") AnnotationAssertion( "WBbt:0005175") AnnotationAssertion( "XAO:0003146") AnnotationAssertion( "ZFA:0000413") AnnotationAssertion( "gonada") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "ZFA:0000413") Annotation( ) "gonads") AnnotationAssertion( "UBERON:0000991") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "gonad") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (ovary) AnnotationAssertion(Annotation( ) Annotation( "ISBN:0-683-40008-8"^^xsd:string) Annotation( "MP:0001126") "The gonad of a female organism which contains germ cells.") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0000371") Annotation( "AAO"^^xsd:string) Annotation( "AAO:BJB"^^xsd:string) "Either of paired female reproductive organs involved in production of ova and female sex hormones.[AAO]") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0000403") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "Female reproductive organ.[TAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000251") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "DOI:10.1093/icb/icm052 Extavour CGM, Gray anatomy: phylogenetic patterns of somatic gonad structures and reproductive strategies across the Bilateria. Integrative and Comparative Biology (2007), DOI:10.1146/annurev.cellbio.042308.13350 DeFalco T and Capel B, Gonad morphogenesis in vertebrates: divergent means to a convergent end. Annual review of cell and developmental biology (2009)") "(...) while it is likely that Urbilateria lacked a complex somatic reproductive system, it is at present impossible to speculate on whether or not it possessed a true gonad, let alone any other somatic adaptations for reproduction (reference 1); Examination of different vertebrate species shows that the adult gonad is remarkably similar in its morphology across different phylogenetic classes. Surprisingly, however, the cellular and molecular programs employed to create similar organs are not evolutionarily conserved (reference 2).[uncertain][VHOG]") AnnotationAssertion( "ovarian") AnnotationAssertion(Annotation( "WP"^^xsd:string) "Ovaries of some kind are found in the female reproductive system of many animals that employ sexual reproduction, including invertebrates. However, they develop in a very different way in most invertebrates than they do in vertebrates, and are not truly homologous. Many of the features found in human ovaries are common to all vertebrates, including the presence of follicular cells, tunica albuginea, and so on. However, many species produce a far greater number of eggs during their lifetime than do humans, so that, in fish and amphibians, there may be hundreds, or even millions of fertile eggs present in the ovary at any given time. In these species, fresh eggs may be developing from the germinal epithelium throughout life. Corpora lutea are found only in mammals, and in some elasmobranch fish; in other species, the remnants of the follicle are quickly resorbed by the ovary. In birds, reptiles, and monotremes, the egg is relatively large, filling the follicle, and distorting the shape of the ovary at maturity. Amphibians and reptiles have no ovarian medulla; the central part of the ovary is a hollow, lymph-filled space. The ovary of teleosts is also often hollow, but in this case, the eggs are shed into the cavity, which opens into the oviduct. Although most normal female vertebrates have two ovaries, this is not the case in all species. In birds and platypuses, the right ovary never matures, so that only the left is functional. In some elasmobranchs, the reverse is true, with only the right ovary fully developing. In the primitive jawless fish, and some teleosts, there is only one ovary, formed by the fusion of the paired organs in the embryo") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0000371") AnnotationAssertion( "BILA:0000125") AnnotationAssertion( "BSA:0000080") AnnotationAssertion( "BTO:0000975") AnnotationAssertion( "CALOHA:TS-0730") AnnotationAssertion( "EFO:0000973") AnnotationAssertion( "EHDAA2:0001360") AnnotationAssertion( "EHDAA:8124") AnnotationAssertion( "EMAPA:17962") AnnotationAssertion( "EV:0100111") AnnotationAssertion( "FBbt:00004865") AnnotationAssertion( "FMA:7209") AnnotationAssertion( "GAID:367") AnnotationAssertion( "MA:0000384") AnnotationAssertion( "MESH:D010053") AnnotationAssertion( "MIAA:0000125") AnnotationAssertion( "NCIT:C12404") AnnotationAssertion( "OpenCyc:Mx4rvVi9QJwpEbGdrcN5Y29ycA") AnnotationAssertion( "TAO:0000403") AnnotationAssertion(Annotation( "ncithesaurus:Ovary") "UMLS:C0029939") AnnotationAssertion( "VHOG:0000251") AnnotationAssertion( "XAO:0000258") AnnotationAssertion( "ZFA:0000403") AnnotationAssertion(Annotation( "EFO:0000973") "animal ovary") AnnotationAssertion( "female gonad") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "female organism genitalia gonad") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "female organism genitalia gonada") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "female organism reproductive system gonad") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "female organism reproductive system gonada") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "female reproductive system gonad") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "female reproductive system gonada") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "genitalia of female organism gonad") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "genitalia of female organism gonada") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "gonad of female organism genitalia") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "gonad of female organism reproductive system") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "gonad of female reproductive system") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "gonad of genitalia of female organism") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "gonad of reproductive system of female organism") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "gonada of female organism genitalia") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "gonada of female organism reproductive system") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "gonada of female reproductive system") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "gonada of genitalia of female organism") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "gonada of reproductive system of female organism") AnnotationAssertion(Annotation( "GO:0061039") Annotation( ) "ovum-producing ovary") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "reproductive system of female organism gonad") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "reproductive system of female organism gonada") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "ovaries") AnnotationAssertion(Annotation( ) Annotation( ) "ovarium") AnnotationAssertion( "UBERON:0000992") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "ovary") AnnotationAssertion( "Female:anatomy.png"^^xsd:anyURI) AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/d/d4/Gray589.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses( ) # Class: (oviduct) AnnotationAssertion(Annotation( ) "A tube or collection of tubes in an animal from the ovaries to the outside of the body.") AnnotationAssertion( "sometimes oviduct is used interchangeably with follaopian tube. Here they are different - the oviduct connects the gonad to the outside in a variety of animals. The mammal-class fallopian tube is derived from the mullerian duct and connects the gonads/infubdibulum to the uterus") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001136") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( ) "A passage through which ova leave the maternal body or pass to an organ communicating with the exterior of the body. [TFD][VHOG]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001136") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0030223693 Liem KF, Bemis WE, Walker WF, Grande L, Functional Anatomy of the Vertebrates: An Evolutionary Perspective (2001) p.687-688") "In all remaining vertebrates (i.e., coelacanths, lungfishes, amphibians, reptiles, birds, and mammals), the oviduct arises in ontogeny as a longitudinal, groovelike invagination of the coelomic epithelium on the lateral surface of the mesonephros.[well established][VHOG]") AnnotationAssertion( "The only female vertebrates to lack oviducts are the jawless fishes. In these species, the single fused ovary releases eggs directly into the body cavity. The fish eventually extrudes the eggs through small genital pores towards the rear of the body[WP]") AnnotationAssertion( "in birds divided into infundibulum, magnum, isthmus, uterus, and vagina") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010533") AnnotationAssertion( "BSA:0000083") AnnotationAssertion( "BTO:0000980") AnnotationAssertion( "EFO:0000974") AnnotationAssertion( "EMAPA:18984") AnnotationAssertion( "GAID:366") AnnotationAssertion( "MAT:0000126") AnnotationAssertion( "MESH:D010057") AnnotationAssertion( "MIAA:0000126") AnnotationAssertion( "NCIT:C77957") AnnotationAssertion( "TAO:0000560") AnnotationAssertion(Annotation( "ncithesaurus:Oviduct") "UMLS:C0029954") AnnotationAssertion( "VHOG:0001136") AnnotationAssertion( "XAO:0003052") AnnotationAssertion( "ZFA:0000560") AnnotationAssertion(Annotation( ) "ovarian duct") AnnotationAssertion(Annotation( ) "ovarian tube") AnnotationAssertion( "uterine tube") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "female reproductive tracts") AnnotationAssertion(Annotation( "ZFA:0000560") Annotation( ) "oviducts") AnnotationAssertion(Annotation( "BTO:0000980") "tuba uterina") AnnotationAssertion(Annotation( "BTO:0000980") "tuba uterinae") AnnotationAssertion(Annotation( ) "tubular parts of female reproductive system") AnnotationAssertion( "UBERON:0000993") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "oviduct") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (spermathecum) AnnotationAssertion(Annotation( ) Annotation( ) "An organ of the female reproductive tract that functions to receive and store sperm from the male, and can sometimes be the site of fertilization when the oocytes are ready.") AnnotationAssertion( "Some species have multiple spermathecae, as seen in earthworms, where four pairs of spermathecae are present. One pair in 6,7,8 and 9 segments. They receive and store the spermatozoa of another earthworm during copulation") AnnotationAssertion( ) AnnotationAssertion( "BTO:0001273") AnnotationAssertion( "EFO:0000977") AnnotationAssertion( "FBbt:00004921") AnnotationAssertion( "HAO:0000945") AnnotationAssertion( "MAT:0000168") AnnotationAssertion( "MIAA:0000168") AnnotationAssertion( "TGMA:0000560") AnnotationAssertion( "WBbt:0005319") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0001273") "receptaculum seminis") AnnotationAssertion( "seminal receptacle") AnnotationAssertion(Annotation( ) "spermatheca") AnnotationAssertion(Annotation( ) "spermathecae") AnnotationAssertion( "UBERON:0000994") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "spermathecum") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (uterus) AnnotationAssertion(Annotation( "MGI:csmith"^^xsd:string) Annotation( "MP:0001120") "The female muscular organ of gestation in which the developing embryo or fetus is nourished until birth.") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001137") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( ) "The hollow muscular organ in female mammals in which the blastocyst normally becomes embedded and in which the developing embryo and fetus is nourished. Its cavity opens into the vagina below and into a uterine tube on either side. [TFD][VHOG]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001137") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0030223693 Liem KF, Bemis WE, Walker WF, Grande L, Functional Anatomy of the Vertebrates: An Evolutionary Perspective (2001) p.678") "An infundibulum, uterine tube, uterus, and vagina also differentiate along the oviducts of eutherian mammals.[well established][VHOG]") AnnotationAssertion( "uterine") AnnotationAssertion( "Most animals that lay eggs, such as birds and reptiles, have an oviduct instead of a uterus. In monotremes, mammals which lay eggs and include the platypus, either the term uterus or oviduct is used to describe the same organ, but the egg does not develop a placenta within the mother and thus does not receive further nourishment after formation and fertilization. Marsupials have two uteruses, each of which connect to a lateral vagina and which both use a third, middle 'vagina' which functions as the birth canal. Marsupial embryos form a choriovitelline 'placenta' (which can be thought of as something between a monotreme egg and a 'true' placenta), in which the egg's yolk sac supplies a large part of the embryo's nutrition but also attaches to the uterine wall and takes nutrients from the mother's bloodstream.") AnnotationAssertion( "Two uteruses usually form initially in a female fetus, and in placental mammals they may partially or completely fuse into a single uterus depending on the species. In many species with two uteruses, only one is functional. Humans and other higher primates such as chimpanzees, along with horses, usually have a single completely fused uterus, although in some individuals the uteruses may not have completely fused [Wikipedia:Uterus]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0001424") AnnotationAssertion( "CALOHA:TS-1102") AnnotationAssertion( "EFO:0000975") AnnotationAssertion( "EMAPA:29915") AnnotationAssertion( "EV:0100113") AnnotationAssertion( "FMA:17558") AnnotationAssertion( "GAID:172") AnnotationAssertion( "MA:0000389") AnnotationAssertion( "MAT:0000127") AnnotationAssertion( "MESH:D014599") AnnotationAssertion( "MIAA:0000127") AnnotationAssertion( "NCIT:C12405") AnnotationAssertion( "OpenCyc:Mx4rvViojJwpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Uterus") "UMLS:C0042149") AnnotationAssertion( "VHOG:0001137") AnnotationAssertion( "galen:Uterus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0000995") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "uterus") AnnotationAssertion( "Female:anatomy.png"^^xsd:anyURI) AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/6/6a/Female_reproductive_system_lateral_nolabel.png"^^xsd:anyURI) SubClassOf(Annotation( "cjm"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (vagina) AnnotationAssertion(Annotation( ) Annotation( ) "A fibromuscular tubular tract leading from the uterus to the exterior of the body in female placental mammals and marsupials, or to the cloaca in female birds, monotremes, and some reptiles[WP].") AnnotationAssertion(Annotation( "2012-11-29") Annotation( "FMA:19949") Annotation( "FMA") "Organ with organ cavity which connects the cervical canal of uterus to the vestibule of vagina.[FMA]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001138") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( ) "The genital canal in the female, leading from the opening of the vulva to the cervix of the uterus. [TFD][VHOG]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001138") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0030223693 Liem KF, Bemis WE, Walker WF, Grande L, Functional Anatomy of the Vertebrates: An Evolutionary Perspective (2001) p.688") "The distal end of the oviducts differentiates as a vagina in Metatheria and Eutheria.[well established][VHOG]") AnnotationAssertion( "vaginal") AnnotationAssertion( "'The distal end of the oviducts differentiates as a vagina in Metatheria and Eutheria.' Liem KF, Bemis WE, Walker WF, Grande L, Functional Anatomy of the Vertebrates: An Evolutionary Perspective, Third Edition (2001) Orlando Fla.: Harcourt College Publishers, p.688") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0000243") AnnotationAssertion( "CALOHA:TS-1103") AnnotationAssertion( "EFO:0000976") AnnotationAssertion( "EMAPA:18986") AnnotationAssertion( "EV:0100117") AnnotationAssertion( "FMA:19949") AnnotationAssertion( "GAID:381") AnnotationAssertion( "MA:0000394") AnnotationAssertion( "MAT:0000128") AnnotationAssertion( "MESH:D014621") AnnotationAssertion( "MIAA:0000128") AnnotationAssertion( "NCIT:C12407") AnnotationAssertion( "OpenCyc:Mx4rvVj1B5wpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Vagina") "UMLS:C0042232") AnnotationAssertion( "VHOG:0001138") AnnotationAssertion( "galen:Vagina") AnnotationAssertion( "uberon") AnnotationAssertion( "distal oviductal region") AnnotationAssertion( "distal portion of oviduct") AnnotationAssertion(Annotation( ) "vaginae") AnnotationAssertion( "UBERON:0000996") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "vagina") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/1/1b/Illu_repdt_female.jpg"^^xsd:anyURI) AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/a/a4/Vaginal_opening_-_english_description.jpg"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "cjm"^^xsd:string) ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "Wikipedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (mammalian vulva) AnnotationAssertion(Annotation( ) "External genital organs of the female mammal[WP].") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001458") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( ) "The external genital organs of the female, including the labia majora, labia minora, clitoris, and vestibule of the vagina. [TFD][VHOG]") AnnotationAssertion( "vulval") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0003101") AnnotationAssertion( "CALOHA:TS-1168") AnnotationAssertion( "EFO:0000978") AnnotationAssertion( "EMAPA:36631") AnnotationAssertion( "EV:0100118") AnnotationAssertion( "FMA:20462") AnnotationAssertion( "GAID:383") AnnotationAssertion( "MA:0000395") AnnotationAssertion( "MAT:0000169") AnnotationAssertion( "MESH:D014844") AnnotationAssertion( "MIAA:0000169") AnnotationAssertion( "NCIT:C12408") AnnotationAssertion( "OpenCyc:Mx4rvgAWeJwpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Vulva") "UMLS:C0042993") AnnotationAssertion( "VHOG:0001458") AnnotationAssertion( "galen:Vulva") AnnotationAssertion(Annotation( "BTO:0003101") Annotation( "FMA:20462") "female pudendum") AnnotationAssertion( "mammalian vulva") AnnotationAssertion(Annotation( "FMA:20462") "puboperineal region") AnnotationAssertion(Annotation( "FMA:20462") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "pudendum femininum") AnnotationAssertion( "skin of female pudendum") AnnotationAssertion( "skin of vulva") AnnotationAssertion(Annotation( "MA:0000395") "vulva") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0003101") "pudendum") AnnotationAssertion(Annotation( ) Annotation( ) "pudendum femininum") AnnotationAssertion(Annotation( "BTO:0003101") "pudendum muliebre") AnnotationAssertion( "UBERON:0000997") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "mammalian vulva") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/d/da/Female_unshaved_genitalia.jpg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (seminal vesicle) AnnotationAssertion(Annotation( ) Annotation( "BTO:0001234") "Either of a pair of glandular pouches that lie one on either side of the male reproductive tract posterolateral to the urinary bladder and in the human male secrete a sugar- and protein-containing fluid into the ejaculatory duct.") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001379") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( ) "Either of a pair of pouchlike glands situated on each side of the male urinary bladder that secrete seminal fluid and nourish and promote the movement of spermatozoa through the urethra. [TFD][VHOG]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001379") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0072528305 Kardong KV, Vertebrates: Comparative Anatomy, Function, Evolution (2006) p.556") "(In mammalian testis) Along the way (the sperm travel), three accessory sex glands, the seminal vesicle, prostate, and bulbourethral (Cowper's) gland, respectively, add their secretions as sperm move from the testes to the urethra.[well established][VHOG]") AnnotationAssertion( "The seminal vesicles secrete a significant proportion of the fluid that ultimately becomes semen. Lipofuscin granules from dead epithelial cells give the secretion its yellowish color. About 50-70% of the seminal fluid in humans originates from the seminal vesicles, but is not expelled in the first ejaculate fractions which are dominated by spermatozoa and zinc-rich prostatic fluid.") AnnotationAssertion( "seminal gland") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010788") AnnotationAssertion( "BTO:0001234") AnnotationAssertion( "CALOHA:TS-0919") AnnotationAssertion( "EFO:0000986") AnnotationAssertion( "EMAPA:19180") AnnotationAssertion( "EV:0100106") AnnotationAssertion( "FMA:19386") AnnotationAssertion( "GAID:394") AnnotationAssertion( "MA:0000410") AnnotationAssertion( "MAT:0000171") AnnotationAssertion( "MESH:D012669") AnnotationAssertion( "MIAA:0000171") AnnotationAssertion( "NCIT:C12787") AnnotationAssertion( "OpenCyc:Mx4rwTtRpJwpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Seminal_Vesicle") "UMLS:C0036628") AnnotationAssertion( "VHOG:0001379") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0001234") "glandula seminalis") AnnotationAssertion(Annotation( "BTO:0001234") "glandula vesiculosa") AnnotationAssertion( "gonecyst") AnnotationAssertion( "vas efferens") AnnotationAssertion(Annotation( ) "vesicula seminalis") AnnotationAssertion(Annotation( "BTO:0001234") "vesicula seminalis") AnnotationAssertion(Annotation( ) "vesiculae seminales") AnnotationAssertion(Annotation( ) Annotation( ) "vesiculae seminales") AnnotationAssertion(Annotation( ) "vesicular gland") AnnotationAssertion(Annotation( ) "vesicular glands") AnnotationAssertion(Annotation( ) "vesicular seminalis") AnnotationAssertion(Annotation( ) "vesiculæ seminales") AnnotationAssertion( "UBERON:0000998") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "seminal vesicle") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/d/d1/Male_anatomy_en.svg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (ejaculatory duct) AnnotationAssertion(Annotation( ) "The Ejaculatory ducts (ductus ejaculatorii) are paired structures in male anatomy, about 2 cm in length. Each ejaculatory duct is formed by the union of the vas deferens with the duct of the seminal vesicle. They pass through the prostate, and empty into the urethra at the Colliculus seminalis. During ejaculation, semen passes through the ducts and exits the body via the penis[WP,unvetted].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0001580") AnnotationAssertion( "CALOHA:TS-0211") AnnotationAssertion( "EFO:0000985") AnnotationAssertion( "EMAPA:19088") AnnotationAssertion( "FMA:19325") AnnotationAssertion( "GAID:388") AnnotationAssertion( "MA:0003247") AnnotationAssertion( "MAT:0000170") AnnotationAssertion( "MESH:D004543") AnnotationAssertion( "MIAA:0000170") AnnotationAssertion( "NCIT:C32493") AnnotationAssertion( "OpenCyc:Mx4rwOt7MJwpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Ejaculatory_Duct") "UMLS:C0013747") AnnotationAssertion(Annotation( "BTO:0001580") Annotation( ) "ductus ejaculatorii") AnnotationAssertion(Annotation( "BTO:0001580") "ductus ejaculatorius") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "ductus ejaculatorii") AnnotationAssertion( "UBERON:0000999") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "ejaculatory duct") AnnotationAssertion( "Male:anatomy.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (vas deferens) AnnotationAssertion(Annotation( ) Annotation( ) Annotation( "ISBN:0-683-40008-8"^^xsd:string) Annotation( "MGI:pvb") Annotation( "MP:0002769") "A secretory duct that transports sperm from the testis. In mammals this is a continuation of the epididymis and ends in the prostatic urethra where it terminates to form ejaculatory duct.") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001135") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0030223693 Liem KF, Bemis WE, Walker WF, Grande L, Functional Anatomy of the Vertebrates: An Evolutionary Perspective (2001) p.670") "The continuation of the archinephric duct, now called the deferent duct, extends caudally to the cloaca or to the part of the mammalian urethra that is derived from the cloaca.[well established][VHOG]") AnnotationAssertion(Annotation( "WP"^^xsd:string) "Most vertebrates have some form of duct to transfer the sperm from the testes to the urethra. In cartilaginous fish and amphibians, sperm is carried through the archinephric duct, which also partially helps to transport urine from the kidneys. In teleosts, there is a distinct sperm duct, separate from the ureters, and often called the vas deferens, although probably not truly homologous with that in humans. In cartilaginous fishes, the part of the archinephric duct closest to the testis is coiled up to form an epididymis. Below this are a number of small glands secreting components of the seminal fluid. The final portion of the duct also receives ducts from the kidneys in most species. In amniotes, however, the archinephric duct has become a true vas deferens, and is used only for conducting sperm, never urine. As in cartilaginous fish, the upper part of the duct forms the epididymis. In many species, the vas deferens ends in a small sac for storing sperm. The only vertebrates to lack any structure resembling a vas deferens are the primitive jawless fishes, which release sperm directly into the body cavity, and then into the surrounding water through a simple opening in the body wall.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0001427") AnnotationAssertion( "CALOHA:TS-1105") AnnotationAssertion( "EFO:0000981") AnnotationAssertion( "EMAPA:18681") AnnotationAssertion( "EV:0100105") AnnotationAssertion( "FMA:19234") AnnotationAssertion( "GAID:404") AnnotationAssertion( "MA:0000413") AnnotationAssertion( "MESH:D014649") AnnotationAssertion( "MIAA:0000129") AnnotationAssertion( "NCIT:C12813") AnnotationAssertion( "OpenCyc:Mx4rvjv7bpwpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Vas_Deferens") "UMLS:C0042360") AnnotationAssertion( "VHOG:0001135") AnnotationAssertion( "galen:VasDeferens") AnnotationAssertion( "deferent duct") AnnotationAssertion(Annotation( ) "ductus deferens") AnnotationAssertion( "vas deferen") AnnotationAssertion( "uberon") AnnotationAssertion( "sperm duct") AnnotationAssertion( "vasa deferentia") AnnotationAssertion( "UBERON:0001000") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "vas deferens") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/d/d1/Male_anatomy_en.svg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (cuticle) AnnotationAssertion(Annotation( ) Annotation( ) "Tough but flexible, non-mineral outer coverings of an organism, or parts of an organism, that provide protection. Cuticles are non-homologous, differing in their origin, structure and chemical composition[WP].") AnnotationAssertion( "TODO - check cuticle vs exoskeleton. Note that GO has a very generic definition of cuticle. See also arthropod-anatomy ontology. Note in ncit Cuticle is a plant part") AnnotationAssertion( "cuticular") AnnotationAssertion( ) AnnotationAssertion( "BTO:0001600") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0001600") "cuticula") AnnotationAssertion( "cuticular exoskeleton") AnnotationAssertion( "UBERON:0001002") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "cuticle") SubClassOf( ) DisjointClasses( ) # Class: (skin epidermis) AnnotationAssertion(Annotation( ) Annotation( "ISBN:0073040584"^^xsd:string) "The outer epithelial layer of the skin that is superficial to the dermis.") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0000105") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "A cellular, multilayered epithelium derived from the ectoderm. Zebrafish epidermis consists only of living cells unlike terrestrial vertebrates in which dead, keratinized cells are present. Le Guellec et al, 2004.[TAO]") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0000143") Annotation( "AAO"^^xsd:string) Annotation( "AAO:BJB"^^xsd:string) "The outer epithelial layer of the external integument of the body that is derived from the embryonic epiblast.[AAO]") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0000143") Annotation( "AAO"^^xsd:string) "relationship loss: subclass external integument structures (AAO:0000961)[AAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000077") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0198566694 Schmidt-Rhaesa A, The evolution of organ systems (2007) p.71-72") "(...) outer epithelia in all metazoan animals are homologous. (...) The ancestor of all metazoans likely had an epidermis with a basal extracellular matrix (ECM), an apical extracellular glycocalyx, and one cilium with a striated rootlet per cell.[well established][VHOG]") AnnotationAssertion( "epidermal") AnnotationAssertion( "Zebrafish epidermis consists only of living cells unlike terrestrial vertebrates in which dead, keratinized cells are present. In terrestrial vertebrates the epidermis often forms an outer keratinized or cornified layer, the stratum corneum. Interaction between the epideris and dermis gives rise to feathers (birds), hair and mammary glands (mammals), teeth and scales (placoid: chondrichthyans; cosmoids, ganoid, cycloid in bony fishes).") AnnotationAssertion( "epidermis") AnnotationAssertion( "skin") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0000143") AnnotationAssertion( "BTO:0000404") AnnotationAssertion( "CALOHA:TS-0283") AnnotationAssertion( "EFO:0000954") AnnotationAssertion( "EMAPA:17528") AnnotationAssertion( "EV:0100153") AnnotationAssertion( "FMA:70596") AnnotationAssertion( "GAID:932") AnnotationAssertion( "MA:0000153") AnnotationAssertion( "MAT:0000154") AnnotationAssertion( "MESH:D004817") AnnotationAssertion( "MIAA:0000154") AnnotationAssertion( "NCIT:C12708") AnnotationAssertion( "TAO:0000105") AnnotationAssertion(Annotation( "ncithesaurus:Epidermis") "UMLS:C0014520") AnnotationAssertion( "VHOG:0000077") AnnotationAssertion( "XAO:0000028") AnnotationAssertion( "ZFA:0000105") AnnotationAssertion( "vertebrate epidermis") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001003") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "skin epidermis") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (respiratory system) AnnotationAssertion(Annotation( ) Annotation( ) "Functional system which consists of structures involved in respiration.") AnnotationAssertion(Annotation( ) ) AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0000541") Annotation( "AAO"^^xsd:string) Annotation( "AAO:BJB"^^xsd:string) "The anatomical system in which the exchange of oxygen and carbon dioxide between the organism and its environment.[AAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000202") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0030223693 Liem KF, Bemis WE, Walker WF, Grande L, Functional Anatomy of the Vertebrates: An Evolutionary Perspective (2001) p.599 and Figure 18-23") "There is no doubt that the primitive pattern of vertebrate air-breathing is the buccal pulse pump found in actinopterygian fishes.[well established][VHOG]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0000541") AnnotationAssertion( "BTO:0000203") AnnotationAssertion( "CALOHA:TS-1319") AnnotationAssertion( "EFO:0000804") AnnotationAssertion( "EHDAA2:0001604") AnnotationAssertion( "EHDAA:2203") AnnotationAssertion( "EMAPA:16727") AnnotationAssertion( "EV:0100036") AnnotationAssertion( "FMA:7158") AnnotationAssertion( "GAID:78") AnnotationAssertion( "MA:0000327") AnnotationAssertion( "MAT:0000030") AnnotationAssertion( "MESH:D012137") AnnotationAssertion( "MIAA:0000030") AnnotationAssertion( "NCIT:C12779") AnnotationAssertion( "OpenCyc:Mx4rvVjzFJwpEbGdrcN5Y29ycA") AnnotationAssertion( "TAO:0000272") AnnotationAssertion(Annotation( "ncithesaurus:Respiratory_System") "UMLS:C0035237") AnnotationAssertion( "VHOG:0000202") AnnotationAssertion( "XAO:0000117") AnnotationAssertion( "ZFA:0000272") AnnotationAssertion( "apparatus respiratorius") AnnotationAssertion( "respiratory system") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0000203") "Atmungssystem") AnnotationAssertion(Annotation( "BTO:0000203") "apparatus respiratorius") AnnotationAssertion(Annotation( ) Annotation( ) "systema respiratorium") AnnotationAssertion( "UBERON:0001004") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "respiratory system") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/5/5e/Respiratory_system_complete_en.svg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses( ) DisjointClasses( ) DisjointClasses( ) DisjointClasses( ) DisjointClasses( ) DisjointClasses( ) DisjointClasses( ) DisjointClasses( ) DisjointClasses( ) DisjointClasses( ) DisjointClasses( ) DisjointClasses( ) DisjointClasses( ) DisjointClasses( ) # Class: (respiratory airway) AnnotationAssertion(Annotation( ) "An airway through which respiratory air passes in organisms.") AnnotationAssertion( "This class generically groups trachea and analagous structures throughout metazoa. Consider renaming, as the term could be taken to mean lumen of tracheal system (e.g. in SNOMED). As a grouping class this is quite vague, as it is not clear where the airway begins and ends") AnnotationAssertion(Annotation( ) "airway") AnnotationAssertion(Annotation( ) Annotation( ) "airways") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:265130") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001005") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "respiratory airway") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete spiracle) AnnotationAssertion(Annotation( ) Annotation( "ISBN:3110148986") "OBSOLETE: The mostly slit-like opening on the body surface through which air is taken into the respiratory system.") AnnotationAssertion( "FBbt:00005054") AnnotationAssertion( "HAO:0000950") AnnotationAssertion( "TGMA:0000578") AnnotationAssertion( "UBERON:0010019") AnnotationAssertion( ) AnnotationAssertion( "EFO:0000936") AnnotationAssertion( "MAT:0000208") AnnotationAssertion( "MIAA:0000208") AnnotationAssertion(Annotation( "GO:0035277") "open tracheal system spiracle") AnnotationAssertion(Annotation( "GO:0035277") "spiracle of open tracheal system") AnnotationAssertion( "uberon") AnnotationAssertion( "spiracular gland") AnnotationAssertion( "UBERON:0001006") AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "This class was obsoleted as it grouped together disparate classes. For the fish structure, see UBERON:0010019. The arthropod structure will presumably be added to the arthropod anatomy") AnnotationAssertion(rdfs:label "obsolete spiracle") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (digestive system) AnnotationAssertion(Annotation( ) Annotation( "FB:gg") Annotation( "NLM:alimentary+system") "Anatomical system that has as its parts the organs devoted to the ingestion, digestion, and assimilation of food and the discharge of residual wastes.") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0000129") Annotation( "AAO"^^xsd:string) Annotation( "AAO:BJB"^^xsd:string) "An anatomical system consisting of the alimentary canal and digestive glands responsible for intake, absorption, digestion and excretion of food.[AAO]") AnnotationAssertion( "digestive") AnnotationAssertion(Annotation( "MA"^^xsd:string) "many anatomy ontologies consider gastrointestinal system synonymous with digestive system. here we follow MA in dividing digestive system into gastrointestinal and hepatobiliary. hepatobiliary includes the liver and biliary tract. species-specific AO classes are categorized according to whether liver is included. For example, XAO includes liver as part of XAO:0000125 alimentary system, so we assume this class is the more generic class") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0000129") AnnotationAssertion( "BILA:0000082") AnnotationAssertion( "BTO:0000058") AnnotationAssertion( "CALOHA:TS-1293") AnnotationAssertion( "EFO:0000793") AnnotationAssertion( "EV:0100056") AnnotationAssertion( "FBbt:00005055") AnnotationAssertion( "FMA:7152") AnnotationAssertion( "GAID:278") AnnotationAssertion( "MA:0002431") AnnotationAssertion( "MAT:0000018") AnnotationAssertion( "MESH:D004064") AnnotationAssertion( "MIAA:0000018") AnnotationAssertion( "TADS:0000170") AnnotationAssertion( "TAO:0000339") AnnotationAssertion( "WBbt:0005748") AnnotationAssertion( "XAO:0000125") AnnotationAssertion( "ZFA:0000339") AnnotationAssertion( "galen:DigestiveSystem") AnnotationAssertion( "ncithesaurus:Digestive_System") AnnotationAssertion( "uberon") AnnotationAssertion( "alimentary system") AnnotationAssertion( "alimentary tract") AnnotationAssertion( "gastrointestinal system") AnnotationAssertion( "gut") AnnotationAssertion( "UBERON:0001007") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "digestive system") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses( ) DisjointClasses( ) DisjointClasses( ) DisjointClasses( ) DisjointClasses( ) DisjointClasses( ) DisjointClasses( ) DisjointClasses( ) DisjointClasses( ) DisjointClasses( ) DisjointClasses( ) DisjointClasses( ) DisjointClasses( ) # Class: (renal system) AnnotationAssertion(Annotation( ) Annotation( "GO:0072001") "The renal system in an anatomical system that maintains fluid balance and contributes to electrolyte balance, acid/base balance, and disposal of nitrogenous waste products..") AnnotationAssertion( "In various sources such as Encyclopedia Britannica, the excretory and urinary systems are indeed the same system (see wikipedia talk page); we merge two BTO classes here") AnnotationAssertion(Annotation( "Wikipedia"^^xsd:string) ) AnnotationAssertion(Annotation( ) ) AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0010257") Annotation( "AAO"^^xsd:string) Annotation( "AAO:BJB"^^xsd:string) "An anatomical system which consists of organs and tissues which produce, store, and excrete urine.[AAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000723") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-3540428541 Kapoor BG, Bhavna Khanna, Ichthyology Handbook (2004) p.406") "Evolution of vertebrate renal anatomy appears quite conservative when compared, for example, to evolution of respiratory and cardiovascular systems in vertebrates. Major anatomical changes in vertebrates kidneys separate those of birds and mammals from kidneys of lower vertebrates. General increase in animal size from fish to mammals is reflected by an increase in total number of nephrons per kidney, rather than by constant change in tubular dimensions.[well established][VHOG]") AnnotationAssertion(Annotation( "GO"^^xsd:string) "In humans, the renal system comprises a pair of kidneys, a pair of ureters, urinary bladder, urethra, sphincter muscle and associated blood vessels") AnnotationAssertion(Annotation( ) "This definition is inclusive of the organs of the vertebrate renal system, as well as the Malpighian tubules of insects, and allows for future incorporation of structures such as the antennal glands of crustaceans") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010257") AnnotationAssertion( "BILA:0000015") AnnotationAssertion( "BTO:0001244") AnnotationAssertion( "BTO:0003092") AnnotationAssertion( "CALOHA:TS-1323") AnnotationAssertion( "EFO:0000803") AnnotationAssertion( "EHDAA2:0001601") AnnotationAssertion( "EHDAA:5901") AnnotationAssertion( "EMAPA:17366") AnnotationAssertion( "EV:0100095") AnnotationAssertion( "FBbt:00005056") AnnotationAssertion( "FMA:7159") AnnotationAssertion( "GAID:391") AnnotationAssertion( "MA:0000325") AnnotationAssertion( "MAT:0000027") AnnotationAssertion( "MESH:D014551") AnnotationAssertion( "MIAA:0000027") AnnotationAssertion( "NCIT:C12413") AnnotationAssertion( "TADS:0000162") AnnotationAssertion( "TAO:0000163") AnnotationAssertion(Annotation( "ncithesaurus:Urinary_System") "UMLS:C1508753") AnnotationAssertion( "VHOG:0000723") AnnotationAssertion( "WBbt:0005736") AnnotationAssertion( "XAO:0000143") AnnotationAssertion( "ZFA:0000163") AnnotationAssertion( "galen:UrinaryTract") AnnotationAssertion( "excretory system") AnnotationAssertion(Annotation( "GO:0001977") "renal system") AnnotationAssertion(Annotation( "FMA:7159") "systema urinaria") AnnotationAssertion(Annotation( "BTO:0003092") "systema urinarium") AnnotationAssertion( "urinary system") AnnotationAssertion( "urinary tract") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "EHDAA:5901") "renal or urinary system") AnnotationAssertion( "renal/urinary system") AnnotationAssertion( "UBERON:0001008") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "renal system") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses( ) DisjointClasses( ) DisjointClasses( ) DisjointClasses( ) DisjointClasses( ) DisjointClasses( ) DisjointClasses( ) DisjointClasses( ) DisjointClasses( ) DisjointClasses( ) DisjointClasses( ) DisjointClasses( ) # Class: (circulatory system) AnnotationAssertion(Annotation( ) "Organ system that passes nutrients (such as amino acids and electrolytes), gases, hormones, blood cells, etc. to and from cells in the body to help fight diseases and help stabilize body temperature and pH to maintain homeostasis[WP].") AnnotationAssertion( "the cardiovascular system and the lymphatic system are parts of the circulatory system") AnnotationAssertion(Annotation( ) ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "WBbt coelomocyte currently classified as circulating cell") ) AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0000959") Annotation( "AAO"^^xsd:string) Annotation( "AAO:BJB"^^xsd:string) "Anatomical system of ion binding, a pumping mechanism, and an efficient vascular system; consisting of the blood, heart, and blood and lymph vessels, respectively.[AAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001248") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0072528305 Kardong KV, Vertebrates: Comparative Anatomy, Function, Evolution (2006) p.493") "We should divest ourselves of the view that earlier vertebrate groups were 'on their way' to becoming mammals, as clearly they were not such visionaries. Neither were their systems 'imperfect' as earlier anatomists thought. Instead, their circulatory systems served them well to address the ecological demands arising from their lifestyles.[well established][VHOG]") AnnotationAssertion( ) AnnotationAssertion( "AAO:0000959") AnnotationAssertion( "CALOHA:TS-2103") AnnotationAssertion( "FBbt:00005057") AnnotationAssertion( "OpenCyc:Mx4rvVjzG5wpEbGdrcN5Y29ycA") AnnotationAssertion( "VHOG:0001248") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "systema cardiovasculare") AnnotationAssertion( "UBERON:0001009") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "circulatory system") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/2/29/Circulatory_System_en.svg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses( ) DisjointClasses( ) DisjointClasses( ) DisjointClasses( ) DisjointClasses( ) DisjointClasses( ) DisjointClasses( ) DisjointClasses( ) DisjointClasses( ) DisjointClasses( ) DisjointClasses( ) # Class: (diaphysis of ulna) AnnotationAssertion(Annotation( ) "The body of the ulna at its upper part is prismatic in form, and curved so as to be convex behind and lateralward; its central part is straight; its lower part is rounded, smooth, and bent a little lateralward. It tapers gradually from above downward, and has three borders and three surfaces.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:33760") AnnotationAssertion( "NCIT:C120676") AnnotationAssertion(Annotation( "FMA:33760") "body of ulna") AnnotationAssertion(Annotation( "FMA:33760") "corpus ulnae") AnnotationAssertion(Annotation( "FMA:33760") "shaft of ulna") AnnotationAssertion(Annotation( "FMA:33760") "ulnar diaphysis") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "shaft of ulna") AnnotationAssertion(Annotation( ) "supinator crest") AnnotationAssertion( "UBERON:0001010") AnnotationAssertion(rdfs:label "diaphysis of ulna") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (head of radius) AnnotationAssertion(Annotation( ) "The head of the radius has a cylindrical form, and on its upper surface is a shallow cup or fovea for articulation with the capitulum (or capitellum) of the humerus. The circumference of the head is smooth; it is broad medially where it articulates with the radial notch of the ulna, narrow in the rest of its extent, which is embraced by the annular ligament. The deepest point in the fovea is not axi-symmetric with the long axis of the radius, creating a cam effect during pronation and supination[WP].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:33773") AnnotationAssertion( "galen:HeadOfRadius") AnnotationAssertion(Annotation( "FMA:33773") "radial head") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "caput radii") AnnotationAssertion( "UBERON:0001012") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "head of radius") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/4/47/Gray214.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (adipose tissue) AnnotationAssertion(Annotation( ) Annotation( ) Annotation( "MESH:A10.165.114") Annotation( "MGI:cwg"^^xsd:string) Annotation( "MP:0000003") "Portion of connective tissue composed of adipocytes enmeshed in areolar tissue.") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0002134") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "Connective tissue in which fat is stored.[TAO]") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0000001") Annotation( "AAO"^^xsd:string) Annotation( "AAO:LAP"^^xsd:string) "Tissue that contains adipocytes, used for cushioning, thermal insulation, lubrication (primarily in the pericardium) and energy storage.[AAO]") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0000001") Annotation( "AAO"^^xsd:string) "relationship loss: subclass connective tissue proper (AAO:0000099)[AAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001284") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "DOI:10.1017/S0029665107005423 Haugen F, Drevon CA, The interplay between nutrients and the adipose tissue. The Proceedings of the Nutrition Society (2007)") "Adipose tissue is unique to vertebrates. It is found in mostmammals, birds, reptiles and amphibians, and a variety is found in some species of fish. Furthermore, in insects the fat body found in larvae as well as in adults shares some homology with adipose tissue.[well established][VHOG]") AnnotationAssertion( "adipose") AnnotationAssertion( "In humans, adipose tissue is located beneath the skin (subcutaneous fat), around internal organs (visceral fat), in bone marrow (yellow bone marrow) and in breast tissue. Adipose tissue is found in specific locations, which are referred to as adipose depots. Adipose tissue contains several cell types, with the highest percentage of cells being adipocytes, which contain fat droplets. Other cell types include fibroblasts, macrophages, and endothelial cells. Adipose tissue contains many small blood vessels.; Mice have eight major adipose depots, four of which are within the abdominal cavity. The paired gonadal depots are attached to the uterus and ovaries in females and the epididymis and testes in males; the paired retroperitoneal depots are found along the dorsal wall of the abdomen, surrounding the kidney, and, when massive, extend into the pelvis. The mesenteric depot forms a glue-like web that supports the intestines, and the omental depot, which originates near the stomach and spleen, and, when massive, extends into the ventral abdomen.") AnnotationAssertion(Annotation( "FMA"^^xsd:string) "in FMA this is dense irregular connective tissue") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0000001") AnnotationAssertion( "AEO:000020") AnnotationAssertion( "BTO:0001487") AnnotationAssertion( "CALOHA:TS-0013") AnnotationAssertion( "EFO:0000790") AnnotationAssertion( "EHDAA2:0003120") AnnotationAssertion( "EMAPA:35112") AnnotationAssertion( "EV:0100381") AnnotationAssertion( "FMA:20110") AnnotationAssertion( "GAID:920") AnnotationAssertion( "MA:0000009") AnnotationAssertion( "MAT:0000015") AnnotationAssertion( "MESH:D000273") AnnotationAssertion( "MIAA:0000015") AnnotationAssertion( "NCIT:C12472") AnnotationAssertion( "OpenCyc:Mx4rvVjc_ZwpEbGdrcN5Y29ycA") AnnotationAssertion( "TAO:0002134") AnnotationAssertion(Annotation( "ncithesaurus:Adipose_Tissue") "UMLS:C0001527") AnnotationAssertion( "VHOG:0001284") AnnotationAssertion( "XAO:0003049") AnnotationAssertion( "ZFA:0005345") AnnotationAssertion( "galen:FattyTissue") AnnotationAssertion(Annotation( "MA:0000009") "fat") AnnotationAssertion( "fat tissue") AnnotationAssertion( "fatty tissue") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0001487") "adipose") AnnotationAssertion(Annotation( "BTO:0001487") "bodyfat") AnnotationAssertion( "fatty depot") AnnotationAssertion( "UBERON:0001013") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "adipose tissue") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses( ) # Class: (obsolete fat body) AnnotationAssertion( "UBERON:0003917") AnnotationAssertion( "fat pad") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001014") AnnotationAssertion(rdfs:label "obsolete fat body") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (musculature) AnnotationAssertion(Annotation( ) Annotation( ) "A subdivision of the muscular system corresponding to a subdisivision of an organism.") AnnotationAssertion(Annotation( "FMA"^^xsd:string) "In FMA this is classified as a set of organs. ZFA musculature system has subtypes, so it is classified here. WBbt muscular system has subtypes so it goes here. Note that we use the MA term set of skeletal muscles here as it seems most appropriate (*not* MA:musculature). AAO is generally confused here.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0011066") AnnotationAssertion( "BTO:0000887") AnnotationAssertion( "EFO:0001949") AnnotationAssertion( "EMAPA:32715") AnnotationAssertion( "EMAPA:35577") AnnotationAssertion( "FMA:32558") AnnotationAssertion( "MA:0000165") AnnotationAssertion( "NCIT:C13056") AnnotationAssertion( "OpenCyc:Mx4rvVjmr5wpEbGdrcN5Y29ycA") AnnotationAssertion( "TAO:0000548") AnnotationAssertion(Annotation( "ncithesaurus:Muscle") "UMLS:C0026845") AnnotationAssertion( "VSAO:0005038") AnnotationAssertion( "WBbt:0005737") AnnotationAssertion( "ZFA:0000548") AnnotationAssertion( "muscle group") AnnotationAssertion( "muscles set") AnnotationAssertion( "musculature") AnnotationAssertion(Annotation( "FMA:32558") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "musculi") AnnotationAssertion(Annotation( "FMA:32558") "set of muscles") AnnotationAssertion(Annotation( "MA:0000165") "set of skeletal muscles") AnnotationAssertion( "uberon") AnnotationAssertion( "muscle system") AnnotationAssertion( "muscles") AnnotationAssertion( "musculature system") AnnotationAssertion( "UBERON:0001015") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "musculature") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/e/e5/Muscles_anterior_labeled.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (nervous system) AnnotationAssertion(Annotation( ) Annotation( "BIRNLEX:844") Annotation( "ISBN:0-14-051288-8") Annotation( "ISBN:3110148986") Annotation( "NLM:nervous+system") Annotation( "WB:rynl") Annotation( "ZFIN:curator"^^xsd:string) "The nervous system is an organ system containing predominantly neuron and glial cells. In bilaterally symmetrical organism, it is arranged in a network of tree-like structures connected to a central body. The main functions of the nervous system are to regulate and control body functions, and to receive sensory input, process this information, and generate behavior [CUMBO].") AnnotationAssertion( ) AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0000396") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "A regulatory system of the body that consists of neurons and neuroglial cells. The nervous system is divided into two parts, the central nervous system (CNS) and the peripheral nervous system (PNS). (Source: BioGlossary, www.Biology-Text.com)[TAO]") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0000324") Annotation( "AAO"^^xsd:string) Annotation( "AAO:BJB"^^xsd:string) "Anatomical system consisting of nerve bodies and nerve fibers which regulate the response of the body to external and internal stimuli.[AAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000402") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0198566694 Schmidt-Rhaesa A, The evolution of organ systems (2007) p.117") "Nervous systems evolved in the ancestor of Eumetazoa.[well established][VHOG]") AnnotationAssertion( "nervous") AnnotationAssertion( "neural") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0000324") AnnotationAssertion( "BILA:0000079") AnnotationAssertion( "BIRNLEX:844") AnnotationAssertion( "BTO:0001484") AnnotationAssertion( "CALOHA:TS-1313") AnnotationAssertion( "EFO:0000802") AnnotationAssertion( "EHDAA2:0001246") AnnotationAssertion( "EHDAA:826") AnnotationAssertion( "EMAPA:16469") AnnotationAssertion( "EV:0100162") AnnotationAssertion( "FBbt:00005093") AnnotationAssertion( "FMA:7157") AnnotationAssertion( "GAID:466") AnnotationAssertion( "MA:0000016") AnnotationAssertion( "MAT:0000026") AnnotationAssertion( "MESH:D009420") AnnotationAssertion( "MIAA:0000026") AnnotationAssertion( "NCIT:C12755") AnnotationAssertion( "OpenCyc:Mx4rvViT_pwpEbGdrcN5Y29ycA") AnnotationAssertion( "TAO:0000396") AnnotationAssertion(Annotation( "ncithesaurus:Nervous_System") "UMLS:C0027763") AnnotationAssertion( "VHOG:0000402") AnnotationAssertion( "WBbt:0005735") AnnotationAssertion( "XAO:0000177") AnnotationAssertion( "ZFA:0000396") AnnotationAssertion(Annotation( "GO:0050877") "neurological system") AnnotationAssertion(Annotation( ) "nerve net") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "systema nervosum") AnnotationAssertion( "UBERON:0001016") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "nervous system") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/b/b2/TE-Nervous_system_diagram.svg"^^xsd:anyURI) AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/b/ba/Nervous_system_diagram.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "Bgee:AN"^^xsd:string) ObjectSomeValuesFrom( )) DisjointClasses( ) DisjointClasses( ) DisjointClasses( ) DisjointClasses( ) DisjointClasses( ) DisjointClasses( ) DisjointClasses( ) DisjointClasses( ) DisjointClasses( ) DisjointClasses( ) # Class: (central nervous system) AnnotationAssertion(Annotation( ) Annotation( ) Annotation( "GO:0021551") "The central nervous system is the core nervous system that serves an integrating and coordinating function. In vertebrates it consists of the neural tube derivatives: the brain and spinal cord. In invertebrates it includes central ganglia plus nerve cord.") AnnotationAssertion(Annotation( ) ) AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0000090") Annotation( "AAO"^^xsd:string) Annotation( "AAO:BJB"^^xsd:string) "Part of the nervous system which includes the brain and spinal cord.[AAO]") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0000012") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "The brain and spinal cord. Kimmel et al, 1995.[TAO]") AnnotationAssertion(Annotation( "BIRNLEX:1099") "The central nervous system (CNS) is the part of the nervous system which includes the brain, spinal cord, and nerve cell layer of the retina (CUMBO).") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000293") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0030223693 Liem KF, Bemis WE, Walker WF, Grande L, Functional Anatomy of the Vertebrates: An Evolutionary Perspective (2001) p.28 (reference 1), ISBN:978-0072528305 Kardong KV, Vertebrates: Comparative Anatomy, Function, Evolution (2006) p.165 (reference 2), DOI:10.1016/j.cell.2007.02.040 Denes AS, Jekely G, Steinmetz PRH, Raible F, Snyman H, Prud'homme B, Ferrier DEK, Balavoine G and Arendt D, Molecular architecture of annelid nerve cord supports common origin of nervous system centralization in Bilateria. Cell (2007) (reference 3)") "(...) at some stage of its development, every chordate exhibits five uniquely derived characters or synapomorphies of the group: (...) (4) a single, tubular nerve cord that is located dorsal to the notochord (...) (reference 1); The neural tube is destined to differentiate into the brain and spinal cord (the central nervous system) (reference 2); Taken together, our data make a very strong case that the complex molecular mediolateral architecture of the developing trunk CNS (central nervous system), as shared between Platynereis and vertebrates, was already present in their last common ancestor, Urbilateria. The concept of bilaterian nervous system centralization implies that neuron types concentrate on one side of the trunk, as is the case in vertebrates and many invertebrates including Platynereis, where they segregate and become spatially organized (as opposed to a diffuse nerve net). Our data reveal that a large part of the spatial organization of the annelid and vertebrate CNS was already present in their last common ancestor, which implies that Urbilateria had already possessed a CNS (reference 3).[well established][VHOG]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0000090") AnnotationAssertion( "BAMS:CNS") AnnotationAssertion( "BILA:0000080") AnnotationAssertion( "BIRNLEX:1099") AnnotationAssertion( "BTO:0000227") AnnotationAssertion( "CALOHA:TS-0150") AnnotationAssertion( "EFO:0000908") AnnotationAssertion( "EHDAA2:0000225") AnnotationAssertion( "EHDAA:828") AnnotationAssertion( "EMAPA:16470") AnnotationAssertion( "EMAPA:16754") AnnotationAssertion( "EV:0100163") AnnotationAssertion( "FBbt:00005094") AnnotationAssertion( "FMA:55675") AnnotationAssertion( "GAID:570") AnnotationAssertion( "MA:0000167") AnnotationAssertion( "MAT:0000457") AnnotationAssertion( "MESH:D002490") AnnotationAssertion( "NCIT:C12438") AnnotationAssertion( "OpenCyc:Mx4rvzYt3pwpEbGdrcN5Y29ycA") AnnotationAssertion( "TAO:0000012") AnnotationAssertion(Annotation( "BIRNLEX:1099") "UMLS:C0927232") AnnotationAssertion(Annotation( "ncithesaurus:Central_Nervous_System") "UMLS:C0927232") AnnotationAssertion( "VHOG:0000293") AnnotationAssertion( "XAO:0000215") AnnotationAssertion( "ZFA:0000012") AnnotationAssertion(Annotation( ) "CNS") AnnotationAssertion(Annotation( "FMA:55675") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "systema nervosum centrale") AnnotationAssertion(Annotation( "FMA:55675") "cerebrospinal axis") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:55675") "neuraxis") AnnotationAssertion( "UBERON:0001017") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "central nervous system") SubClassOf( ) SubClassOf(Annotation( "FBbt") Annotation( "cjm"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "Bgee:AN"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (axon tract) AnnotationAssertion(Annotation( ) Annotation( ) "A group of axons linking two or more neuropils and having a common origin, termination[FBbt].") AnnotationAssertion(Annotation( ) "White matter structure of CNS that contains axons that arise predominantly in one central nervous system part and terminate in another. Tracts are generally named by their region or origin followed by their region of primary termination, e.g., mammillothalamic tract contains axons that arise from neurons in the mammillary bodies and terminate in the thalamus. (CUMBO)") AnnotationAssertion( "BIRNLEX:1649") AnnotationAssertion( "EV:0100304") AnnotationAssertion( "FBbt:00005100") AnnotationAssertion( "FMA:83847") AnnotationAssertion( "NLX:147822") AnnotationAssertion( "axonal tract") AnnotationAssertion(Annotation( "FMA:83847") "neuraxis tract") AnnotationAssertion(Annotation( "FMA:83847") "tract of neuraxis") AnnotationAssertion(Annotation( "BIRNLEX:1649") "nerve tract") AnnotationAssertion( "uberon") AnnotationAssertion( "nerve tract") AnnotationAssertion( "tract") AnnotationAssertion( "UBERON:0001018") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "WP says this is the analog of peripheral nerves in CNS.") AnnotationAssertion(rdfs:label "axon tract") SubClassOf( ) SubClassOf( ) # Class: (nerve fasciculus) AnnotationAssertion(Annotation( "BIRNLEX:872") Annotation( "FBbt:00005101") "A slender neuron projection bundle[FBbt]; A bundle of anatomical fibers, as of muscle or nerve (American Heritage Dictionary 4th ed).") AnnotationAssertion( "note FBbt class not disjoint from tract. Consider merging with 'neuron projection bundle'") AnnotationAssertion(Annotation( "FBbt:00005101") "fascicle") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:872") AnnotationAssertion( "BTO:0002191") AnnotationAssertion( "EMAPA:36605") AnnotationAssertion( "FMA:12235") AnnotationAssertion( "NCIT:C32586") AnnotationAssertion( "TGMA:0000088") AnnotationAssertion(Annotation( "ncithesaurus:Fascicle") "UMLS:C1185741") AnnotationAssertion(Annotation( ) "fasciculus") AnnotationAssertion(Annotation( "FMA:12235") "nerve bundle") AnnotationAssertion(Annotation( "FMA:12235") "nerve fasciculus") AnnotationAssertion(Annotation( "FMA:12235") "neural fasciculus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0002191") "nerve fiber tract") AnnotationAssertion( "UBERON:0001019") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "nerve fasciculus") SubClassOf( ) # Class: (nervous system commissure) AnnotationAssertion(Annotation( ) Annotation( ) Annotation( "NLXANAT:20090513") "Axon tract that crosses the midline of the central nervous system[NIF, modified]. In the context of Drosophila refers to a broad band of axons connecting equivalent neuropils each side of the brain[FBbt].") AnnotationAssertion(Annotation( ) "White matter fiber bundle that crosses the midline of the brain or spinal cord, that connects similar structures on both sides. (CUMBO; Heimer, L. The Human Brain, 2nd ed., 1995, pg 6)") AnnotationAssertion( "commissural") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "commissure") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FBbt:00005103") AnnotationAssertion( "FMA:83906") AnnotationAssertion( "NCIT:C32349") AnnotationAssertion( "NLX:110") AnnotationAssertion( "NLXANAT:20090513") AnnotationAssertion( "OpenCyc:Mx4rdBrmE6gOEdudWQACs5b6Bw") AnnotationAssertion( "TADS:0000201") AnnotationAssertion(Annotation( "ncithesaurus:Commissure") "UMLS:C1185742") AnnotationAssertion(Annotation( "FMA:83906") "commissure of neuraxis") AnnotationAssertion(Annotation( "FMA:83906") "neuraxis commissure") AnnotationAssertion(Annotation( "CUMBO:CUMBO") "white matter commissure") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001020") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "*not* the same as FMA:76741 Commissure") AnnotationAssertion(rdfs:label "nervous system commissure") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (nerve) AnnotationAssertion(Annotation( ) Annotation( "FBbt:00005105") "An enclosed, cable-like bundle of axons in the peripheral nervous system originating in a nerve root in the central nervous system (or a condensed nervous structure) connecting with peripheral structures.") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0007009") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "A portion of tissue which is a fasiculated group of axons.[TAO]") AnnotationAssertion( "nervous") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0011070") AnnotationAssertion( "AEO:0000137") AnnotationAssertion( "BAMS:n") AnnotationAssertion( "BIRNLEX:1615") AnnotationAssertion( "BSA:0000098") AnnotationAssertion( "BTO:0000925") AnnotationAssertion( "BTO:0001027") AnnotationAssertion( "CALOHA:TS-0772") AnnotationAssertion( "EHDAA2:0003137") AnnotationAssertion( "EHDAA:2851") AnnotationAssertion( "EHDAA:3776") AnnotationAssertion( "EHDAA:4657") AnnotationAssertion( "EMAPA:32808") AnnotationAssertion( "EMAPA:32815") AnnotationAssertion( "EV:0100371") AnnotationAssertion( "FBbt:00005105") AnnotationAssertion( "FMA:65132") AnnotationAssertion( "FMA:65239") AnnotationAssertion( "GAID:747") AnnotationAssertion( "GAID:758") AnnotationAssertion( "MA:0000217") AnnotationAssertion( "MA:0000228") AnnotationAssertion( "MESH:D010525") AnnotationAssertion( "NCIT:C12466") AnnotationAssertion( "NCIT:C12768") AnnotationAssertion( "NLX:147826") AnnotationAssertion( "OpenCyc:Mx4rwP3lkpwpEbGdrcN5Y29ycA") AnnotationAssertion( "TAO:0007009") AnnotationAssertion(Annotation( "ncithesaurus:Nerve") "UMLS:C0027740") AnnotationAssertion(Annotation( "ncithesaurus:Peripheral_Nerve") "UMLS:C0031119") AnnotationAssertion( "VHOG:0000901") AnnotationAssertion( "XAO:0000204") AnnotationAssertion( "XAO:0003047") AnnotationAssertion( "ZFA:0007009") AnnotationAssertion( "galen:Nerve") AnnotationAssertion(Annotation( "TAO:0007009") Annotation( ) "nerves") AnnotationAssertion(Annotation( ) "peripheral nerve") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:65132") "neural subtree") AnnotationAssertion( "UBERON:0001021") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "nerve") SubClassOf(Annotation( "FBbt") ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete cell body) AnnotationAssertion( "FBbt:00005107") AnnotationAssertion( "FMA:67301") AnnotationAssertion( "GO:0043025") AnnotationAssertion( "NIF_Subcellular:sao1044911821") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001022") AnnotationAssertion(rdfs:label "obsolete cell body") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete dendrite) AnnotationAssertion(Annotation( ) Annotation( ) "The region of a neuron receiving inputs from other neurons, typically a slender neurite, often branched. In insect neurons, this is often not a clear designation and often presynaptic sites co-extend with postsynaptic ones.") AnnotationAssertion( "dendritic") AnnotationAssertion( "FBbt:00005110") AnnotationAssertion( "FMA:67314") AnnotationAssertion( "GAID:749") AnnotationAssertion( "GO:0030425") AnnotationAssertion( "MESH:A08.663.256") AnnotationAssertion( "NCIT:C32447") AnnotationAssertion( "NIF_Subcellular:sao1211023249") AnnotationAssertion( "OpenCyc:Mx4rviIdspwpEbGdrcN5Y29ycA") AnnotationAssertion( "TGMA:0001373") AnnotationAssertion( "UMLS:C0011305") AnnotationAssertion( ) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001023") AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "Made obsolete as it was equivalent to GO class") AnnotationAssertion(rdfs:label "obsolete dendrite") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete neurite) AnnotationAssertion(Annotation( ) Annotation( ) "One of the processes or extensions of a neuron, axon or dendrite or cell body fiber. // Cell appendage of the neuron which includes the axon and the dendrite.") AnnotationAssertion( "FBbt:00005113") AnnotationAssertion( "FMA:61814") AnnotationAssertion( "GAID:751") AnnotationAssertion( "GO:0043005") AnnotationAssertion( "MESH:A08.663.256.500") AnnotationAssertion( "NIF_Subcellular:sao-867568886") AnnotationAssertion( ) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001024") AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "Made obsolete as it was equivalent to GO class") AnnotationAssertion(rdfs:label "obsolete neurite") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete synapse) AnnotationAssertion(Annotation( ) Annotation( ) "The structural contact that is the site of transmission between neurons, identified by a presynaptic ribbon and synaptic vesicles as the input element and one or (usually) more postsynaptic elements with various specializations (membrane densities, cisternae, etc.).") AnnotationAssertion( "synaptic") AnnotationAssertion( "FBbt:00005114") AnnotationAssertion( "FMA:67408") AnnotationAssertion( "GAID:766") AnnotationAssertion( "GO:0045202") AnnotationAssertion( "MESH:A08.850") AnnotationAssertion( "NCIT:C13281") AnnotationAssertion( "NIF_Subcellular:sao914572699") AnnotationAssertion( "SCTID:362298009") AnnotationAssertion( "UMLS:C0039062") AnnotationAssertion( ) AnnotationAssertion( "synaptic junction") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001025") AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "Made obsolete as it was equivalent to GO class") AnnotationAssertion(rdfs:label "obsolete synapse") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete motor nerve) AnnotationAssertion(Annotation( ) "A motor nerve is an efferent nerve that exclusively contains the axons of somatic and branchial motoneurons, which innervate skeletal muscles (that ensure locomotion) and branchial muscles (that motorize the face and neck)[WP].") AnnotationAssertion( "UBERON:0006798") AnnotationAssertion( ) AnnotationAssertion( "nervus motorius") AnnotationAssertion( "uberon") AnnotationAssertion( "efferent nerve") AnnotationAssertion( "UBERON:0001026") AnnotationAssertion(rdfs:label "obsolete motor nerve") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (sensory nerve) AnnotationAssertion(Annotation( ) Annotation( "UBERON:cjm"^^xsd:string) "A nerve that transmits from sensory receptors on the surface of the body to the central nervous system.") AnnotationAssertion( ) AnnotationAssertion( "AEO:0000201") AnnotationAssertion( "EHDAA2:0003200") AnnotationAssertion( "FBbt:00005136") AnnotationAssertion( "FMA:5868") AnnotationAssertion( "OpenCyc:Mx4rv0GdXpwpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( ) Annotation( ) "nervus sensorius") AnnotationAssertion( "uberon") AnnotationAssertion( "afferent nerve") AnnotationAssertion( "UBERON:0001027") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "sensory nerve") SubClassOf( ) SubClassOf(Annotation( "AEO"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (diaphysis of radius) AnnotationAssertion(Annotation( ) Annotation( "OBOL:automatic"^^xsd:string) "A diaphysis that is part of a radius bone[Automatically generated definition].") AnnotationAssertion(Annotation( ) "The body of the radius (or shaft of radius) is prismoid in form, narrower above than below, and slightly curved, so as to be convex lateralward. It presents three borders and three surfaces[Wikipedia:Body_of_radius].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:33782") AnnotationAssertion( "NCIT:C120674") AnnotationAssertion(Annotation( "FMA:33782") "body of radius") AnnotationAssertion(Annotation( "FMA:33782") "corpus radii") AnnotationAssertion(Annotation( "FMA:33782") "radial diaphysis") AnnotationAssertion(Annotation( "FMA:33782") "shaft of radius") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "radial shaft") AnnotationAssertion(Annotation( ) "shaft of radius") AnnotationAssertion( "UBERON:0001028") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "diaphysis of radius") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete neuromuscular junction) AnnotationAssertion( "GO:0031594") AnnotationAssertion( "FBbt:00005142") AnnotationAssertion( "FMA:61803") AnnotationAssertion( "GAID:809") AnnotationAssertion( "MESH:D009469") AnnotationAssertion( "NIF_Subcellular:sao1124888485") AnnotationAssertion( ) AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "junctio neuromuscularis") AnnotationAssertion(Annotation( ) Annotation( ) "synapsis neuromuscularis") AnnotationAssertion( "UBERON:0001029") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "obsolete neuromuscular junction") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete synaptic ribbon) AnnotationAssertion( "FBbt:00005143") AnnotationAssertion( "FMA:67107") AnnotationAssertion( "GO:0048788") AnnotationAssertion( "NIF_Subcellular:sao1884931180") AnnotationAssertion( "ribbon synapse") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001030") AnnotationAssertion(rdfs:label "obsolete synaptic ribbon") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (sheath of Schwann) AnnotationAssertion(Annotation( ) "The outermost nucleated cytoplasmic layer of Schwann cells that surrounds the axon of the neuron. It forms the outermost layer of the nerve fiber in the peripheral nervous system. The neurolemma is underlain by the basal lamina (referred to as the medullary sheath in the included illustrations. In CNS, axons are myelinated by oligodendrocytes, thus lack neurolemma.") AnnotationAssertion(Annotation( "FMA"^^xsd:string) "FMA def is 'Neural tissue which consists of Schwann cells' which does not fit, but we still use 'neural tissue' here. WP def specifically states Schwann cells, which would restrict it to PNS") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0003048") AnnotationAssertion( "FMA:62976") AnnotationAssertion( "GAID:730") AnnotationAssertion( "MESH:D009441") AnnotationAssertion( "NCIT:C33544") AnnotationAssertion(Annotation( "ncithesaurus:Sheath_of_Schwann") "UMLS:C0027807") AnnotationAssertion(Annotation( "FMA:62976") "neurilemma") AnnotationAssertion( "neurolemma") AnnotationAssertion( "sheath of Schwann") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0003048") "Schwann's membrane") AnnotationAssertion(Annotation( "BTO:0003048") "endoneural membrane") AnnotationAssertion( "UBERON:0001031") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "sheath of Schwann") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/3/34/Gray631.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (sensory system) AnnotationAssertion(Annotation( ) "Anatomical system that overlaps the nervous system and is responsible for receiving and processing sensory information.") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001674") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "DOI:10.1073/pnas.97.9.4449 Shimeld SM and Holland PW. Vertebrate innovations. PNAS (2000)") "An early step in the evolution of neural crest, therefore, may have been the origin of a specific dorsal neural cell population contributing to sensory processing; this would predate the divergence of the amphioxus and vertebrate lineages.[well established][VHOG]") AnnotationAssertion( "note the distinct between entire sensory system and individual system. this reconciles is_a and part_of distinctions between ssAOs") AnnotationAssertion( ) AnnotationAssertion( "AAO:0000555") AnnotationAssertion( "BAMS:SEN") AnnotationAssertion( "BILA:0000099") AnnotationAssertion( "EFO:0000805") AnnotationAssertion( "EHDAA2:0003094") AnnotationAssertion( "EMAPA:16192") AnnotationAssertion( "FBbt:00007692") AnnotationAssertion( "FMA:75259") AnnotationAssertion( "MA:0002442") AnnotationAssertion( "MAT:0000031") AnnotationAssertion( "MIAA:0000031") AnnotationAssertion( "NLXANAT:090816") AnnotationAssertion( "TAO:0000282") AnnotationAssertion( "VHOG:0001674") AnnotationAssertion( "XAO:0003194") AnnotationAssertion( "ZFA:0000282") AnnotationAssertion(Annotation( "FMA:75259") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "organa sensuum") AnnotationAssertion( "sense organ subsystem") AnnotationAssertion(Annotation( "FMA:75259") "sense organs") AnnotationAssertion(Annotation( "FMA:75259") "sense organs set") AnnotationAssertion( "sensory subsystem") AnnotationAssertion(Annotation( "TAO:0000282") Annotation( ) "sensory systems") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "organa sensuum") AnnotationAssertion( "sensory organ system") AnnotationAssertion(Annotation( "FMA:75259") "set of sense organs") AnnotationAssertion( "UBERON:0001032") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "sensory system") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/c/c0/Gray722.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) # Class: (gustatory system) AnnotationAssertion(Annotation( "NLXANAT:090803") "The sensory system for the sense of taste.") AnnotationAssertion(Annotation( "NLXANAT:090803") "The sensory system for the sense of taste[NLXANAT:090803].") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0010577") Annotation( "AAO"^^xsd:string) Annotation( "AAO:EJS"^^xsd:string) "The sensory system used for the sense of taste.[AAO]") AnnotationAssertion( "gustatory") AnnotationAssertion(Annotation( "ZFA"^^xsd:string) "in ZFA and MA this is a subtype of sensory system. we should change sensory system to disambiguate parts and wholes") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010577") AnnotationAssertion( "BILA:0000143") AnnotationAssertion( "EFO:0000830") AnnotationAssertion( "FMA:7194") AnnotationAssertion( "MA:0002446") AnnotationAssertion( "MAT:0000275") AnnotationAssertion( "MIAA:0000275") AnnotationAssertion( "NLXANAT:090803") AnnotationAssertion( "TAO:0001101") AnnotationAssertion( "XAO:0003197") AnnotationAssertion( "ZFA:0001101") AnnotationAssertion( "gustatory organ system") AnnotationAssertion( "taste system") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001033") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "gustatory system") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses( ) DisjointClasses( ) DisjointClasses( ) DisjointClasses( ) DisjointClasses( ) DisjointClasses( ) DisjointClasses( ) DisjointClasses( ) DisjointClasses( ) # Class: (obsolete photoreceptor) AnnotationAssertion(Annotation( ) "Can refer to a light sensitive organ, a photoreceptor cell or a photoreceptor protein. This class was made obsolete because it was ambiguous.") AnnotationAssertion( "CL:0000210") AnnotationAssertion( "FBbt:00005162") AnnotationAssertion( "FMA:85613") AnnotationAssertion( "GAID:778") AnnotationAssertion( ) AnnotationAssertion( "BTO:0001060") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001034") AnnotationAssertion(rdfs:label "obsolete photoreceptor") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (dento-alveolar joint) AnnotationAssertion(Annotation( ) Annotation( ) "A joint that binds the teeth to the alveolar ridge.") AnnotationAssertion( "Specifically, the connection is made between the maxillary or mandible to the cementum of the tooth. The motion of a gomphosis is very minimal, though considerable movement can be achieved over time--the basis of using braces to realign teeth. The joint can be considered a synarthrosis or an amphiarthrosis. The gomphosis is the only joint-type in which a bone does not join another bone, as teeth are not technically bone. In modern, more anatomical, joint classification, the gomphosis is simply considered a fibrous joint because the tissue linking the structures is ligamentous[WP]") AnnotationAssertion(Annotation( "MA"^^xsd:string) "MA classifies this as a cartilaginous joint") AnnotationAssertion(Annotation( "FMA:7495") "socket") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37464") AnnotationAssertion( "FMA:7495") AnnotationAssertion( "MA:0001499") AnnotationAssertion( "OpenCyc:Mx4rveAQeZwpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "FMA:7495") "dento-alveolar syndesmosis") AnnotationAssertion(Annotation( "MA:0001499") "gomphosis") AnnotationAssertion(Annotation( "FMA:7495") "peg-and-socket joint") AnnotationAssertion(Annotation( "FMA:7495") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "syndesmosis dentoalveolaris") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001035") AnnotationAssertion(rdfs:label "dento-alveolar joint") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/6/6c/Gray1003.png"^^xsd:anyURI) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (strand of hair) AnnotationAssertion(Annotation( ) "A filament, mostly protein, that grows from follicles found in the dermis[WP].") AnnotationAssertion( "TODO for now we treat vibrissa/whisker as a syonym, but these have different follicles. We could introduce subclasses (see also: Pangolin scales)") AnnotationAssertion( "this class defines an individual hair") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0001501") AnnotationAssertion( "CALOHA:TS-0430") AnnotationAssertion( "EFO:0000958") AnnotationAssertion( "EMAPA:18769") AnnotationAssertion( "EV:0100157") AnnotationAssertion( "FMA:53667") AnnotationAssertion( "GAID:71") AnnotationAssertion( "MA:0000155") AnnotationAssertion( "MAT:0000160") AnnotationAssertion( "MESH:D006197") AnnotationAssertion( "MIAA:0000160") AnnotationAssertion( "NCIT:C32705") AnnotationAssertion( "OpenCyc:Mx4rvVjOX5wpEbGdrcN5Y29ycA-Mp88EdaAAACgycbRww") AnnotationAssertion(Annotation( "ncithesaurus:Hair") "UMLS:C0018494") AnnotationAssertion( "VHOG:0001191") AnnotationAssertion( "hair") AnnotationAssertion( "uberon") AnnotationAssertion( "coat hair") AnnotationAssertion( "coat/ hair") AnnotationAssertion( "fur") AnnotationAssertion( "microchaeta") AnnotationAssertion(Annotation( ) "quill") AnnotationAssertion( "setulae") AnnotationAssertion(Annotation( ) "vibrissa") AnnotationAssertion(Annotation( ) "whisker") AnnotationAssertion( "UBERON:0001037") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "strand of hair") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/2/25/Gray945.png"^^xsd:anyURI) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (yolk sac) AnnotationAssertion(Annotation( ) "A sac-like expansion of the ventral wall of the intestine, narrowed into a yolk stalk near the body[Hyman's]. Membranous sac attached to an embryo, providing early nourishment in the form of yolk in bony fishes, sharks, reptiles, birds, and primitive mammals. It functions as the developmental circulatory system of the human embryo, before internal circulation begins. In the mouse, the yolk sac is the first site of blood formation, generating primitive macrophages and erythrocytes[WP].") AnnotationAssertion( "consider splitting class") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000830") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( ) "One of the extraembryonic fetal membranes that balloons out from the fetal midgut. [TFD][VHOG]") AnnotationAssertion(Annotation( "MP:0001718") "the extraembryonic tissue membrane, formed from the visceral endoderm and the extraembryonic mesoderm, which is located ventral to the embryonic disc and is connected to the presumptive midgut of the embryo; the yolk that it contains is the site of embryonic hematopoiesis and vitelline circulation is involved in early embryonic circulation; it is the origin of the primordial germ cells") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000830") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0072528305 Kardong KV, Vertebrates: Comparative Anatomy, Function, Evolution (2006) p.187") "Structures homologous to the four extraembryonic membranes of reptiles and birds appear in mammals: amnion, chorion, yolk sac, and allantois.[well established][VHOG]") AnnotationAssertion( "In therians, a structure homologous to the yolk sac is is present, but contains no yolk platelets. Instead it is filled with fluid [ISBN:0073040584 (Vertebrates, Kardong)]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0001471") AnnotationAssertion( "CALOHA:TS-1130") AnnotationAssertion( "EFO:0003078") AnnotationAssertion( "EHDAA2:0002212") AnnotationAssertion( "EHDAA:164") AnnotationAssertion( "EMAPA:16085") AnnotationAssertion( "FMA:87180") AnnotationAssertion( "GAID:1301") AnnotationAssertion( "MESH:A16.254.403.981") AnnotationAssertion( "NCIT:C14128") AnnotationAssertion(Annotation( "ncithesaurus:Yolk_Sac") "UMLS:C0043425") AnnotationAssertion( "VHOG:0000830") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "saccus vitellinus") AnnotationAssertion(Annotation( ) Annotation( ) "vesicula umbilicalis") AnnotationAssertion( "UBERON:0001040") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "yolk sac") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/1/17/Gray22.png"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "https://github.com/obophenotype/uberon/issues/635") ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ) SubClassOf(Annotation( "ISBN:0073040584"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "ISBN:0073040584"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (foregut) AnnotationAssertion(Annotation( ) "Anterior subdivision of a digestive tract.") AnnotationAssertion( "Note we define this generically to include invertebrates (partly for consistency with GO), but the class may be split in future. In vertebrates the term may refer to a developmental structure") AnnotationAssertion(Annotation( "MP:0000474") "The anterior portion of the primitive digestive tube of the embryo that lies cephalic to the junction of the yolk stalk, consists of endodermal tissue, and gives rise to the the pharynx, lower respiratory system, esophagus, stomach, duodenum proximal to the biliary tract, liver, pancreas, biliary tract, and gall bladder.") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000285") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0030259821 Ruppert EE, Fox RS, Barnes RD, Invertebrate zoology: a functional evolutionary approach (2003) p.203, ISBN:978-0521617147 Stevens CE and Hume ID, Comparative physiology of the vertebrate digestive system (2004) p.11") "The bilaterian gut is typically a complete tube that opens to the exterior at both ends. It consists of mouth, foregut, midgut, hindgut, and anus (reference 1); Although all vertebrates have a digestive tract and accessory glands, various parts of this system are not necessarily homologous, analogous, or even present in all species. Therefore, broad comparisons can be best made under the listings of headgut, foregut, midgut, pancreas and biliary system, hindgut (reference 2).[well established][VHOG]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0011042") AnnotationAssertion( "BILA:0000085") AnnotationAssertion( "BTO:0000507") AnnotationAssertion( "EHDAA2:0000557") AnnotationAssertion( "EHDAA:520") AnnotationAssertion( "EMAPA:16548") AnnotationAssertion( "FBbt:00005379") AnnotationAssertion( "FMA:45616") AnnotationAssertion( "MA:0001526") AnnotationAssertion( "NCIT:C34180") AnnotationAssertion( "TGMA:0001014") AnnotationAssertion(Annotation( "ncithesaurus:Foregut") "UMLS:C0231051") AnnotationAssertion( "VHOG:0000285") AnnotationAssertion( "XAO:0000232") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "praeenteron") AnnotationAssertion(Annotation( ) Annotation( ) "proenteron") AnnotationAssertion( "UBERON:0001041") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "foregut") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/9/9a/Gray27.png"^^xsd:anyURI) SubClassOf( ) # Class: (chordate pharynx) AnnotationAssertion(Annotation( ) "A portion of the respiratory and digestive tracts; its distal limit is the superior part of the esophagus and it connects the nasal and oral cavities with the esophagus and larynx; it contains the valleculae and the pyriform recesses; its upper limits are the nasal cavity and cranial base.[FEED].") AnnotationAssertion(Annotation( "MESH:A03.867") "A funnel-shaped fibromuscular tube that conducts food to the ESOPHAGUS, and air to the LARYNYX and LUNGS. It is located posterior to the NASAL CAVITY; ORAL CAVITY; and LARYNX, and extends from the SKULL BASE to the inferior border of the CRICOID CARTILAGE anteriorly and to the inferior border of the C6 vertebra posteriorly. It is divided into the NASOPHARYNX; OROPHARYNX; and HYPOPHARYNX (laryngopharynx)[MESH:A03.867].") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0000967") Annotation( "AAO"^^xsd:string) Annotation( "AAO:EJS"^^xsd:string) "Anatomical cavity bounded by the derivatives of the branchial arches.[AAO]") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0000056") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "Swollen region of the anterior foregut, posterior to the mouth and anterior to the liver; its walls form the jaws and gills. Kimmel et al, 1995.[TAO]") AnnotationAssertion(Annotation( "ZFIN:ZDB-PUB-961014-576") "Swollen region of the anterior foregut, posterior to the mouth and anterior to the liver; its walls form the jaws and gills[ZFA:0000056, ZFIN:ZDB-PUB-961014-576].") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000462") Annotation( "VHOG"^^xsd:string) Annotation( ) "The portion of the alimentary canal between the mouth and the oesophagus. [Dorian_AF, Elsevier's_encyclopaedic_dictionary_of_medicine, Part_B:_Anatomy_(1988)_Amsterdam_etc.:_Elsevier][VHOG]") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0000967") Annotation( "AAO"^^xsd:string) "relationship type change: part_of_proxy respiratory system (AAO:0000541) CHANGED TO: develops_from respiratory system (UBERON:0001004)[AAO]") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0000967") Annotation( "AAO"^^xsd:string) "relationship type change: part_of_proxy respiratory system (AAO:0000541) CHANGED TO: part_of respiratory system (UBERON:0001004)[AAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000462") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0072528305 Kardong KV, Vertebrates: Comparative Anatomy, Function, Evolution (2006) Box essay 13.1 and Box figure I, p.502-503") "(...) the earliest vertebrates possessed unjointed internal and external branchial arches, and musculature encircling the pharynx.[well established][VHOG]") AnnotationAssertion(Annotation( "MA"^^xsd:string) "MA/FMA pharynx not part of digestive/alimentary system, we are consistent with this scheme") AnnotationAssertion(Annotation( "FMA:46688") Annotation( ) "pharynx") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0000967") AnnotationAssertion( "BTO:0001049") AnnotationAssertion( "CALOHA:TS-0785") AnnotationAssertion( "EFO:0000836") AnnotationAssertion( "EHDAA2:0001458") AnnotationAssertion( "EHDAA:2947") AnnotationAssertion( "EMAPA:16706") AnnotationAssertion( "EV:0100065") AnnotationAssertion( "FMA:46688") AnnotationAssertion( "GAID:155") AnnotationAssertion( "MA:0000432") AnnotationAssertion( "MESH:A03.867") AnnotationAssertion( "NCIT:C12425") AnnotationAssertion( "OpenCyc:Mx4rvViv7ZwpEbGdrcN5Y29ycA") AnnotationAssertion( "TAO:0000056") AnnotationAssertion(Annotation( "ncithesaurus:Pharynx") "UMLS:C0031354") AnnotationAssertion( "VHOG:0000462") AnnotationAssertion( "XAO:0003227") AnnotationAssertion( "ZFA:0000056") AnnotationAssertion( "galen:Pharynx") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001042") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "Consider generalizing to deuterostome pharynx") AnnotationAssertion(rdfs:label "chordate pharynx") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (esophagus) AnnotationAssertion(Annotation( ) Annotation( ) "Tube that connects the pharynx to the stomach. In mammals, the oesophagus connects the buccal cavity with the stomach. The stratified squamous non-keratinised epithelium lining the buccal cavity is continued through the pharynx down into the oesophagus. The lowest part of the oesophagus (ca. 2 cm) is lined with gastric mucosa and covered by peritoneum. The main body of the oesophagus is lined with small, simple mucous glands. Each gland opens into the lumen by a long duct which pierces the muscularis mucosae (Wilson and Washington, 1989). A sphincter is situated at the point where the oesophagus enters the stomach to prevent gastro-oesophageal reflux, i.e. to prevent acidic gastric contents from reaching stratified epithelia of the oesophagus, where they can cause inflammation and irritation (Wilson and Washington, 1989; Brown et al., 1993).") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0000145") Annotation( "AAO"^^xsd:string) Annotation( "AAO:EJS"^^xsd:string) "Anterior end of the alimentary canal lined with smooth muscle. Bounded anteriorly by a constriction in the pharynx. Bounded posteriorly by and increase in circular and/or longitudinal smooth muscle associated with the stomach.[AAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000450") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "DOI:10.1111/j.1096-3642.1996.tb01658.x Mallatt J, Ventilation and the origin of jawed vertebrates: a new mouth. Zoological Journal of the Linnean Society (1996)") "The few structural specializations in (adult lampreys) pharynx include complex valves on the external gill openings that direct the tidal flow, and the division of the ancestral pharynx into an oesophagus and a respiratory pharynx.[well established][VHOG]") AnnotationAssertion( "esophageal") AnnotationAssertion(Annotation( "MA"^^xsd:string) "esophagus NOT part of gut in MA. part of gut in ZFA. part_of gut (via UGIT) in FMA. Consider splitting. Interspecies: The human oesophagus is 25 cm long and has a diameter of ca. 2 cm. Only little information was found on the oesophagus in rat, rabbit and pig. The oesophagus of rat (75 x 2 mm) and rabbit has no mucous glands and the cardia of the stomach has a well-developed sphincter, which prevents them from vomiting (Hebel and Stromberg, 1988; Manning et al., 1994). Morphologically the oesophagus is similar in man and pig; both are omnivores and have a non-keratinised epithelium, submucous glands and similar membrane enzymes. Like in humans, pigs can suffer from reflux oesophagitis and stress ulceration of the oesophagus. The pig oesophagus may therefore be a good model for investigation compared to the human oesophagus (Christie et al., 1995)") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0000145") AnnotationAssertion( "ANISEED:1235301") AnnotationAssertion( "BTO:0000959") AnnotationAssertion( "CALOHA:TS-0700") AnnotationAssertion( "EFO:0000835") AnnotationAssertion( "EHDAA2:0001285") AnnotationAssertion( "EHDAA:2937") AnnotationAssertion( "EMAPA:16833") AnnotationAssertion( "EV:0100069") AnnotationAssertion( "FMA:7131") AnnotationAssertion( "GAID:291") AnnotationAssertion( "MA:0000352") AnnotationAssertion( "MAT:0000048") AnnotationAssertion( "MESH:A03.365") AnnotationAssertion( "MIAA:0000048") AnnotationAssertion( "NCIT:C12389") AnnotationAssertion( "OpenCyc:Mx4rvVj9Q5wpEbGdrcN5Y29ycA") AnnotationAssertion( "TAO:0000204") AnnotationAssertion(Annotation( "ncithesaurus:Esophagus") "UMLS:C0014876") AnnotationAssertion( "VHOG:0000450") AnnotationAssertion( "XAO:0000127") AnnotationAssertion( "ZFA:0000204") AnnotationAssertion( "galen:Esophagus") AnnotationAssertion( "gullet") AnnotationAssertion( "oesophagus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001043") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "esophagus") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/d/d4/Illu01_head_neck.jpg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (saliva-secreting gland) AnnotationAssertion(Annotation( ) Annotation( "GO:0007431") "Saliva-secreting exocrine glands of the oral cavity[GO].") AnnotationAssertion(Annotation( "3") "currently we define saliva and salivary glands very generally in functional terms but it may be more appropriate to split this class. From WP: In most vertebrates, saliva does not contain any enzymes, consisting of mucus and water only, and its primary function is to moisten food while eating. As a result, true salivary glands are rarely found in fish or aquatic tetrapods, although there are often individual mucus-secreting cells. Amphibians have a single salivary gland, the intermaxillary gland, located in the forward part of the palate. Reptiles and birds normally have only very small glands on the lips, palate, and base of the mouth, although there are some birds with large glands, which produce a sticky saliva that helps in nest-building. The distinct parotid, submandibular, and sublingual glands are only developed in mammals.") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000376") Annotation( "VHOG"^^xsd:string) Annotation( ) "A gland that produces the saliva. [Bemis_WE, Functional_Anatomy_of_the_Vertebrates:_An_Evolutionary_Perspective, Glossary_G-25, Grande_L, Liem_KF, Third_Edition_(2001)_Orlando_Fla.:_Harcourt_College_Publishers, Walker_WF][VHOG]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000376") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0471210054 Butler AB and Hodos W, Comparative vertebrate neuroanatomy: Evolution and Adaptationm(2005) p.211") "In air-feeding animals, the lack of water column to lubricate the food has been compensated for by the evolution of the salivary glands. These glands are present only in amniotes and are controlled by the parasympathetic system.[well established][VHOG]") AnnotationAssertion( "The salivary glands in mammals are exocrine glands, glands with ducts, that produce saliva. They also secrete amylase, an enzyme that breaks down starch into maltose. In other organisms such as insects, salivary glands are often used to produce biologically important proteins like silk or glues, and fly salivary glands contain polytene chromosomes that have been useful in genetic research. The salivary glands of some species are modified to produce enzymes; salivary amylase is found in many, but by no means all, bird and mammal species (including humans, as noted above). Furthermore, the venom glands of poisonous snakes, Gila monsters, and some shrews, are modified salivary glands") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0001203") AnnotationAssertion( "CALOHA:TS-0892") AnnotationAssertion( "EFO:0000859") AnnotationAssertion( "EHDAA2:0001775") AnnotationAssertion( "EHDAA:7987") AnnotationAssertion( "EMAPA:17751") AnnotationAssertion( "EV:0100059") AnnotationAssertion( "FBbt:00005382") AnnotationAssertion( "FMA:9597") AnnotationAssertion( "GAID:937") AnnotationAssertion( "MA:0000346") AnnotationAssertion( "MAT:0000079") AnnotationAssertion( "MESH:D012469") AnnotationAssertion( "MIAA:0000079") AnnotationAssertion( "NCIT:C12426") AnnotationAssertion( "OpenCyc:Mx4rvVjl5ZwpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Salivary_Gland") "UMLS:C0036098") AnnotationAssertion( "VHOG:0000376") AnnotationAssertion( "galen:SalivaryGland") AnnotationAssertion(Annotation( "MA:0000346") "salivary gland") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "glandulae salivariae") AnnotationAssertion( "UBERON:0001044") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "saliva-secreting gland") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/5/51/Illu_quiz_hn_02.jpg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (midgut) AnnotationAssertion(Annotation( ) Annotation( "GO:0007494") "Middle subdivision of a digestive tract[CJM]. In vertebrates: The middle part of the alimentary canal from the stomach, or entrance of the bile duct, to, or including, the large intestine[GO].") AnnotationAssertion( "Note we define this generically to include invertebrates (partly for consistency with GO), but the class may be split in future. We may explicitly make this a developmental class") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000290") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0030259821 Ruppert EE, Fox RS, Barnes RD, Invertebrate zoology: a functional evolutionary approach (2003) p.203, ISBN:978-0521617147 Stevens CE and Hume ID, Comparative physiology of the vertebrate digestive system (2004) p.11") "The bilaterian gut is typically a complete tube that opens to the exterior at both ends. It consists of mouth, foregut, midgut, hindgut, and anus (reference 1); Although all vertebrates have a digestive tract and accessory glands, various parts of this system are not necessarily homologous, analogous, or even present in all species. Therefore, broad comparisons can be best made under the listings of headgut, foregut, midgut, pancreas and biliary system, hindgut (reference 2).[well established][VHOG]") AnnotationAssertion(Annotation( "WP"^^xsd:string) "In humans: originates from the foregut at the opening of the bile duct into the duodenum and continues through the small intestine and much of the large intestine until the transition to the hindgut about two-thirds of the way through the transverse colon") AnnotationAssertion(Annotation( "FMA"^^xsd:string) "in FMA this represents an embryonic region.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BILA:0000086") AnnotationAssertion( "BTO:0000863") AnnotationAssertion( "EFO:0001950") AnnotationAssertion( "EHDAA2:0001185") AnnotationAssertion( "EHDAA:983") AnnotationAssertion( "EMAPA:16255") AnnotationAssertion( "FBbt:00005383") AnnotationAssertion( "FMA:45617") AnnotationAssertion( "MA:0001564") AnnotationAssertion( "NCIT:C34210") AnnotationAssertion( "TGMA:0001036") AnnotationAssertion(Annotation( "ncithesaurus:Midgut") "UMLS:C0231052") AnnotationAssertion( "VHOG:0000290") AnnotationAssertion( "XAO:0000103") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "mesenteron") AnnotationAssertion( "UBERON:0001045") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "midgut") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/3/3d/Illu_small_intestine.jpg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (hindgut) AnnotationAssertion(Annotation( ) "The caudalmost subdivision of a digestive tract.") AnnotationAssertion( "Note we define this generically to include invertebrates (partly for consistency with GO), but the class may be split in future (vertebrates have some contribution from NC - https://github.com/obophenotype/uberon/wiki/The-neural-crest). We may explicitly make this a developmental class") AnnotationAssertion(Annotation( "MP:0008786") "the caudal portion of the primitive digestive tube of the embryo") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000459") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0030259821 Ruppert EE, Fox RS, Barnes RD, Invertebrate zoology: a functional evolutionary approach (2003) p.203, ISBN:978-0521617147 Stevens CE and Hume ID, Comparative physiology of the vertebrate digestive system (2004) p.11") "The bilaterian gut is typically a complete tube that opens to the exterior at both ends. It consists of mouth, foregut, midgut, hindgut, and anus (reference 1); Although all vertebrates have a digestive tract and accessory glands, various parts of this system are not necessarily homologous, analogous, or even present in all species. Therefore, broad comparisons can be best made under the listings of headgut, foregut, midgut, pancreas and biliary system, hindgut (reference 2).[well established][VHOG]") AnnotationAssertion(Annotation( "FMA"^^xsd:string) "in FMA this class has no children. In MA it has a single child hindgut epithelium") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0011052") AnnotationAssertion( "BILA:0000087") AnnotationAssertion( "BTO:0000510") AnnotationAssertion( "EHDAA2:0000779") AnnotationAssertion( "EHDAA:975") AnnotationAssertion( "EMAPA:16715") AnnotationAssertion( "FBbt:00005384") AnnotationAssertion( "FMA:45618") AnnotationAssertion( "MA:0001527") AnnotationAssertion( "NCIT:C34188") AnnotationAssertion( "TGMA:0001020") AnnotationAssertion(Annotation( "ncithesaurus:Hindgut") "UMLS:C0231053") AnnotationAssertion( "VHOG:0000459") AnnotationAssertion( "XAO:0000104") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "metenteron") AnnotationAssertion( "UBERON:0001046") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "hindgut") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/f/f7/Gray472.png"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "Wikipedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (neural glomerulus) AnnotationAssertion(Annotation( ) Annotation( ) "Large synaptic bouton found in areas like olfactory bulb, cerebellar cortex and thalamus, that contacts many post-synaptic targets[NIF].") AnnotationAssertion( "UBERON:FBbt_00005386") AnnotationAssertion(Annotation( "FBbt:00005386") Annotation( "NIF_Subcellular:sao587858733") "glomerulus") AnnotationAssertion( "FBbt:00005386") AnnotationAssertion( "NIF_Subcellular:sao587858733") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001047") AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "isa or partof neuropil? TODO. Add to GO-CC?") AnnotationAssertion(rdfs:label "neural glomerulus") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/3/30/Gray1130.svg"^^xsd:anyURI) SubClassOf( ) # Class: (primordium) AnnotationAssertion(Annotation( ) Annotation( "BTO:0001886") Annotation( "FB:DJS") Annotation( "FB:FBrf0089570") "Primordia are populations of contiguous cells that are morphologically distinct and already correspond in extent to a later organ/tissue[FBbt, Hartenstein, V. (2004)].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AEO:0000171") AnnotationAssertion( "BTO:0001886") AnnotationAssertion( "EFO:0001652") AnnotationAssertion( "EHDAA2:0003171") AnnotationAssertion( "FBbt:00005495") AnnotationAssertion( "FMA:86589") AnnotationAssertion( "MAT:0000482") AnnotationAssertion( "NCIT:C34275") AnnotationAssertion(Annotation( "ncithesaurus:Primordium") "UMLS:C0678727") AnnotationAssertion( "XAO:0003043") AnnotationAssertion( "uberon") AnnotationAssertion( "bud") AnnotationAssertion( "future organ") AnnotationAssertion(Annotation( "FBbt:00005495") "placode") AnnotationAssertion(Annotation( "XAO:0003043") Annotation( ) "primordia") AnnotationAssertion( "rudiment") AnnotationAssertion( "UBERON:0001048") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "primordium") SubClassOf(Annotation( "EHDAA2"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (neural tube) AnnotationAssertion(Annotation( ) "In the developing vertebrate, the neural tube is the embryo's precursor to the central nervous system, which comprises the brain and spinal cord. The neural groove gradually deepens as the neural folds become elevated, and ultimately the folds meet and coalesce in the middle line and convert the groove into a closed tube, the neural tube or neural canal (which strictly speaking is the center of the neural tube), the ectodermal wall of which forms the rudiment of the nervous system. [WP,unvetted].") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0010617") Annotation( "AAO"^^xsd:string) Annotation( "AAO:JOR") "Hollow epithelial tube on dorsal side of the embryo that develops into the central nervous system.[AAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000307") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( ) "The dorsal tubular structure in the vertebrate embryo that develops into the brain and spinal cord. [TFD][VHOG]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000307") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0030223693 Liem KF, Bemis WE, Walker WF, Grande L, Functional Anatomy of the Vertebrates: An Evolutionary Perspective (2001) p.28"^^xsd:string) "(...) at some stage of its development, every chordate exhibits five uniquely derived characters or synapomorphies of the group: (...) (4) a single, tubular nerve cord that is located dorsal to the notochord (...).[well established][VHOG]") AnnotationAssertion(Annotation( "GO:0021915") "The mature structure of the neural tube exists when the tube has been segmented into the forebrain, midbrain, hindbrain and spinal cord regions. In addition neural crest has budded away from the epithelium") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010617") AnnotationAssertion( "BTO:0001057") AnnotationAssertion( "CALOHA:TS-2371") AnnotationAssertion( "DHBA:10154") AnnotationAssertion( "EHDAA2:0001254") AnnotationAssertion( "EHDAA:2869") AnnotationAssertion( "EHDAA:908") AnnotationAssertion( "EMAPA:16164") AnnotationAssertion( "EMAPA:16757") AnnotationAssertion( "FMA:293882") AnnotationAssertion( "MAT:0000069") AnnotationAssertion( "MIAA:0000069") AnnotationAssertion( "NCIT:C34226") AnnotationAssertion( "TAO:0001135") AnnotationAssertion(Annotation( "ncithesaurus:Neural_Tube") "UMLS:C0231024") AnnotationAssertion( "VHOG:0000307") AnnotationAssertion( "XAO:0003204") AnnotationAssertion( "ZFA:0001135") AnnotationAssertion( "uberon") AnnotationAssertion( "neural primordium") AnnotationAssertion( "presumptive central nervous system") AnnotationAssertion(Annotation( ) Annotation( ) "tubus neuralis") AnnotationAssertion( "UBERON:0001049") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "neural tube") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/6/64/Gray19_with_color.png"^^xsd:anyURI) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete atrium) AnnotationAssertion( "FMA:85574") AnnotationAssertion( "UBERON:0002081") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001050") AnnotationAssertion(rdfs:comment "obsoleted because 'atrium' as a general grouping class that encompasses the cardiac atrium and atrium of alveolus atrium is of questionable value. Furthermore, the use of the term 'atrium' in the generic sense is misleading, as this is commonly used to refer specifically to the cardiac atrium") AnnotationAssertion(rdfs:label "obsolete atrium") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (hypopharynx) AnnotationAssertion(Annotation( ) "Bottom part of the pharynx that connects to the esophagus.") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000445") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( ) "The inferior portion of the pharynx, between the epiglottis and the larynx. [TFD][VHOG]") AnnotationAssertion( "hypopharyngeal") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0001740") AnnotationAssertion( "CALOHA:TS-2020") AnnotationAssertion( "EFO:0001388") AnnotationAssertion( "EHDAA2:0004574") AnnotationAssertion( "EV:0100068") AnnotationAssertion( "FMA:54880") AnnotationAssertion( "GAID:338") AnnotationAssertion( "MA:0001796") AnnotationAssertion( "MESH:A03.867.490") AnnotationAssertion( "NCIT:C12246") AnnotationAssertion( "OpenCyc:Mx4rvq5O0JwpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Hypopharynx") "UMLS:C0020629") AnnotationAssertion( "VHOG:0000445") AnnotationAssertion(Annotation( "FMA:54877") "laryngeal pharynx") AnnotationAssertion(Annotation( "FMA:54877") "laryngopharynx") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "pars laryngea pharyngis") AnnotationAssertion(Annotation( "BTO:0001740") "pars laryngea pharyngis") AnnotationAssertion( "UBERON:0001051") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "hypopharynx") AnnotationAssertion( "Illu:pharynx.jpg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (rectum) AnnotationAssertion(Annotation( ) Annotation( "ISBN:0-683-40008-8"^^xsd:string) Annotation( "MP:0000492") "The terminal portion of the intestinal tube, terminating with the anus.") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001751") Annotation( "VHOG"^^xsd:string) Annotation( ) "The terminal portion of the large intestine between the ileo-pelvic colon and the anus. [Dorian_AF, Elsevier's_encyclopaedic_dictionary_of_medicine, Part_B:_Anatomy_(1988)_Amsterdam_etc.:_Elsevier][VHOG]") AnnotationAssertion( "rectal") AnnotationAssertion( "In the lungfish, sharks and rays the rectum opens into the cloaca which also receives wastes (urine) from the kidneys and material from the reproductive organs. In bony fish the rectum reaches the outside environment through the anus, which is normally situated just in front the urinary and reproductive openings. However in some fish the digestive tract may be curled back on itself, and in the Electric Eel (Electrophorus electricus) the anus is situated in the fish's throat. -- http://www.earthlife.net/fish/digestion.html") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010401") AnnotationAssertion( "BTO:0001158") AnnotationAssertion( "CALOHA:TS-1180") AnnotationAssertion( "EFO:0000848") AnnotationAssertion( "EHDAA2:0001592") AnnotationAssertion( "EHDAA:5836") AnnotationAssertion( "EMAPA:17896") AnnotationAssertion( "EV:0100081") AnnotationAssertion( "FMA:14544") AnnotationAssertion( "GAID:311") AnnotationAssertion( "MA:0000336") AnnotationAssertion( "MAT:0000050") AnnotationAssertion( "MESH:A03.492.411.495.767") AnnotationAssertion( "MIAA:0000050") AnnotationAssertion( "NCIT:C12390") AnnotationAssertion( "OpenCyc:Mx4rvVjaU5wpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Rectum") "UMLS:C0034896") AnnotationAssertion( "VHOG:0001751") AnnotationAssertion( "XAO:0000238") AnnotationAssertion( "galen:Rectum") AnnotationAssertion( "terminal portion of intestine") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0001158") "intestinum rectum") AnnotationAssertion( "rectal sac") AnnotationAssertion( "terminal portion of large intestine") AnnotationAssertion( "UBERON:0001052") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "rectum") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/7/75/Anorectum.gif"^^xsd:anyURI) SubClassOf(Annotation( "4") Annotation( "cjm"^^xsd:string) ) SubClassOf(Annotation( "MA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "ISBN:0073040584"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (arthropod neurohemal organ) AnnotationAssertion(Annotation( "BTO:0002106") "A system of neurons that has the specialized function to produce and secrete hormones, and that constitutes, in whole or in part, an endocrine organ or system.") AnnotationAssertion( "currently intended for invert structure; alt definitions include: organs in which intimate relationships between axons and terminal blood vessels are established") AnnotationAssertion( "BTO:0002106") AnnotationAssertion( "EFO:0000864") AnnotationAssertion( "FBbt:00005757") AnnotationAssertion( "MAT:0000212") AnnotationAssertion( "MIAA:0000212") AnnotationAssertion( "uberon") AnnotationAssertion( "neurohaemal organ") AnnotationAssertion( "UBERON:0001053") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "brain areas from which substances enter blood for example, the neurohypophysis from which oxytocin and vasopressin enter blood.") AnnotationAssertion(rdfs:label "arthropod neurohemal organ") SubClassOf( ) # Class: (obsolete ureter) AnnotationAssertion( "UBERON:0000056") AnnotationAssertion( "UBERON:0000057") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001055") AnnotationAssertion(rdfs:label "obsolete ureter") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (anatomical entity) AnnotationAssertion(Annotation( ) Annotation( "FMA:62955") "Biological entity that is either an individual member of a biological species or constitutes the structural organization of an individual member of a biological species.") AnnotationAssertion( ) AnnotationAssertion( "AAO:0010841") AnnotationAssertion( "AEO:0000000") AnnotationAssertion( "BILA:0000000") AnnotationAssertion( "BIRNLEX:6") AnnotationAssertion( "CARO:0000000") AnnotationAssertion( "EHDAA2:0002229") AnnotationAssertion( "FBbt:10000000") AnnotationAssertion( "FMA:62955") AnnotationAssertion( "HAO:0000000") AnnotationAssertion( "MA:0000001") AnnotationAssertion( "NCIT:C12219") AnnotationAssertion( "TAO:0100000") AnnotationAssertion( "TGMA:0001822") AnnotationAssertion(Annotation( "ncithesaurus:Anatomic_Structure_System_or_Substance") "UMLS:C1515976") AnnotationAssertion( "WBbt:0000100") AnnotationAssertion( "XAO:0000000") AnnotationAssertion( "ZFA:0100000") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001062") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "anatomical entity") # Class: (flocculus) AnnotationAssertion(Annotation( ) Annotation( ) Annotation( "ISBN:0838580343") Annotation( "MGI:csmith"^^xsd:string) Annotation( "MP:0010006") "The small lobe of the cerebellum at the posterior border of the middle cerebellar peduncle anterior to the biventer lobule that receives input from the inferior and medial vestibular nuclei and sends fibers back to the vestibular nuclei, and processes and integrates these signals to allow for the constant maintenance of balance.") AnnotationAssertion(Annotation( ) "enlarged in pterosaurs") AnnotationAssertion(Annotation( "WP"^^xsd:string) "At its base, the flocculus receives input from the middle ears vestibular system and regulates balance. Many floccular projections descend to the spinal cord and connect to the motor nuclei involved in control of eye movement.") AnnotationAssertion(Annotation( "NIF"^^xsd:string) "flocculus is an exact label for two distinct classes in NIF.") AnnotationAssertion( "UBERON:Flocculus-MA_0000992") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:FL") AnnotationAssertion( "BAMS:Fl") AnnotationAssertion( "BIRNLEX:1329") AnnotationAssertion( "DMBA:16946") AnnotationAssertion( "EMAPA:35346") AnnotationAssertion( "FMA:83881") AnnotationAssertion( "HBA:12945") AnnotationAssertion( "MA:0000992") AnnotationAssertion( "MBA:1049") AnnotationAssertion(Annotation( "FMA:83881") "flocculus of cerebellum") AnnotationAssertion(Annotation( "FMA:83881") "neuraxis flocculus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:83881") "H X") AnnotationAssertion(Annotation( "NLXANAT:20081213") Annotation( ) "hemispheric lobule X") AnnotationAssertion(Annotation( "FMA:83881") "lobule H X of Larsell") AnnotationAssertion(Annotation( "FMA:83881") "lobule X") AnnotationAssertion(Annotation( "FMA:83881") "lobule X of hemisphere of cerebellum") AnnotationAssertion( "UBERON:0001063") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "flocculus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (ventral pancreatic duct) AnnotationAssertion(Annotation( ) "A duct joining the pancreas to the common bile duct to supply pancreatic juices which aid in digestion provided by the exocrine pancreas. The pancreatic duct joins the common bile duct just prior to the ampulla of Vater, after which both ducts perforate the medial side of the second portion of the duodenum at the major duodenal papilla.") AnnotationAssertion( "in EHDAA2 this is an epithelium, in FMA the wall consists of epithelium and connective tissue") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000256") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "DOI:10.1016/j.ydbio.2005.04.035 Yee NS, Lorent K, Pack M, Exocrine pancreas development in zebrafish. Developmental Biology (2005)") "These data show that ducts within the zebrafish pancreas originally arise in situ from isolated progenitor cells rather than arising from reiterative branching of the pancreatic epithelium. This process of pancreatic duct formation in zebrafish may be analogous to the mechanism of duct formation in the mammalian mammary and salivary glands. (...) A related mechanism of duct formation has also been proposed to occur within the mammalian pancreatic epithelium.[uncertain][VHOG]") AnnotationAssertion(Annotation( "WP"^^xsd:string) "Upon reaching its final destination, the ventral pancreatic bud fuses with the much larger dorsal pancreatic bud. At this point of fusion, the main ducts of the ventral and dorsal pancreatic buds fuse, forming the duct of Wirsung, the main pancreatic duct.") AnnotationAssertion( "UBERON:0005627") AnnotationAssertion(Annotation( "MESH:A03.734.667") "pancreatic duct") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0002362") AnnotationAssertion( "EHDAA2:0001396") AnnotationAssertion( "EHDAA:6905") AnnotationAssertion( "EMAPA:17510") AnnotationAssertion( "FMA:16003") AnnotationAssertion( "GAID:337") AnnotationAssertion( "MA:0000126") AnnotationAssertion( "MESH:D010183") AnnotationAssertion( "NCIT:C12272") AnnotationAssertion( "RETIRED_EHDAA2:0002177") AnnotationAssertion(Annotation( "ncithesaurus:Pancreatic_Duct") "UMLS:C0030288") AnnotationAssertion( "VHOG:0000256") AnnotationAssertion(Annotation( "FMA:16003") "chief pancreatic duct") AnnotationAssertion(Annotation( ) "duct of Wirsung") AnnotationAssertion(Annotation( "MA:0000126") "main pancreatic duct") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0002362") "canal of Wirsung") AnnotationAssertion( "ductus pancreatis ventralis") AnnotationAssertion(Annotation( "BTO:0002362") "hepaticopancreatic duct") AnnotationAssertion( "UBERON:0001064") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "ventral pancreatic duct") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/1/15/Gray1100.png"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (parotid main excretory duct) AnnotationAssertion(Annotation( "MP:0009530") "The main excretory tubular canal that connects the parotid gland and the buccal mucosa and secretes a serous saliva into the vestibule of the oral cavity; it arises from the anterior surface of the gland, traversing the masseter muscle; the duct then pierces the buccinator muscle, moving medially, and opens out into the oral cavity near the second upper molar; saliva produced by acinar secretory cells in the glandular body flows sequentially through the intercalated ducts, striated ducts, and excretory ducts.") AnnotationAssertion( "we follow MP in identifying the 'parotid duct' with the main excretory duct, although in fact the parotid has many other ducts of different types") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "duct of parotid") AnnotationAssertion( "duct of parotid gland") AnnotationAssertion( "excretory duct of parotid gland") AnnotationAssertion(Annotation( "MA:0002697") "parotid duct") AnnotationAssertion( "parotid excretory duct") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "parotid gland duct") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0004554") AnnotationAssertion( "EMAPA:36563") AnnotationAssertion( "FMA:10420") AnnotationAssertion( "MA:0002697") AnnotationAssertion( "NCIT:C33277") AnnotationAssertion(Annotation( "ncithesaurus:Parotid_Duct") "UMLS:C0227458") AnnotationAssertion( "Stenon duct") AnnotationAssertion( "Stensen's duct") AnnotationAssertion( "Stensens's duct") AnnotationAssertion( "main duct of parotid gland") AnnotationAssertion( "main excretory duct of parotid gland") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "ductus parotideus") AnnotationAssertion(Annotation( "BTO:0004554") Annotation( ) "ductus stenonianus") AnnotationAssertion(Annotation( "BTO:0004554") "stenonianus") AnnotationAssertion( "UBERON:0001065") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "parotid main excretory duct") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/a/a1/Gray1023.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (intervertebral disk) AnnotationAssertion(Annotation( ) Annotation( "ISBN:0073040584"^^xsd:string) "A pad of fibrocartilage between the articular surfaces of two successive vertebral centra which has nucleus pulposus at its core.") AnnotationAssertion( "strictly speaking the term intervertebral disk [applies to intervertebral cartilage]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0003625") AnnotationAssertion( "EFO:0001370") AnnotationAssertion( "EMAPA:32739") AnnotationAssertion( "FMA:10446") AnnotationAssertion( "GAID:105") AnnotationAssertion( "MA:0000110") AnnotationAssertion( "MESH:A02.165.410") AnnotationAssertion( "NCIT:C49571") AnnotationAssertion( "OpenCyc:Mx4rv11AcpwpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Intervertebral_Disc") "UMLS:C0021815") AnnotationAssertion(Annotation( "FMA:10446") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "discus intervertebralis") AnnotationAssertion( "intervertebral disc") AnnotationAssertion(Annotation( ) "spinal disc") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0003625") "intervertebral fibrocartilage") AnnotationAssertion(Annotation( "BTO:0003625") "spinal disk") AnnotationAssertion( "UBERON:0001066") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "whose gel-like core is nucleus puloposus, by this definition only in mammals") AnnotationAssertion(rdfs:label "intervertebral disk") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/9/92/Gray301.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (vertebral arch joint) AnnotationAssertion(Annotation( ) "A synovial joint between the prezygapophysis of one vertebra and the postzygapophysis of the vertebra directly above it. There are two facet joints in each spinal motion segment[WP].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:10447") AnnotationAssertion( "GAID:275") AnnotationAssertion( "MA:0001513") AnnotationAssertion( "MESH:D021801") AnnotationAssertion( "NCIT:C32577") AnnotationAssertion( "OpenCyc:Mx4rvorHEpwpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Facet_Joint") "UMLS:C0224521") AnnotationAssertion( "facet joint") AnnotationAssertion( "joint of vertebral arch") AnnotationAssertion( "joint of vertebral articular process") AnnotationAssertion(Annotation( "HP:0008482") "spinal facet joint") AnnotationAssertion( "zygapophyseal joint") AnnotationAssertion( "zygapophysial joint") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "articulationes zygapophysiales") AnnotationAssertion( "UBERON:0001067") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "vertebral arch joint") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/d/d2/Gray90.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (skin of back) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A zone of skin that is part of a back [Automatically generated definition].") AnnotationAssertion( "TODO - distinguish between entire skin of region and arbitrary zone of skin on region") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:36392") AnnotationAssertion( "FMA:10462") AnnotationAssertion( "FMA:22985") AnnotationAssertion( "MA:0000498") AnnotationAssertion( "back skin") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "back zone of skin") AnnotationAssertion(Annotation( ) "skin, dorsal region") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "zone of skin of back") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001068") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "skin of back") SubClassOf(Annotation( "MA"^^xsd:string) ) SubClassOf(Annotation( "MA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (head of pancreas) AnnotationAssertion(Annotation( ) "The head of pancreas is a portion of the pancreas that is lodged within the curve of the duodenum, and is flattened anteriorly (from before). The other parts of the pancreas are the body and the tail. Its upper border is overlapped by the superior part of the duodenum and its lower overlaps the horizontal part; its right and left borders overlap in front, and insinuate themselves behind, the descending and ascending parts of the duodenum respectively. [WP,unvetted].") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000448") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "DOI:10.1016/j.crvi.2007.03.006 Madsen OD, Pancreas phylogeny and ontogeny in relation to a 'pancreatic stem cell'. Comptes Rendus Biologies (2007)") "Hagfish and lampreys may have one or more endocrine buds - and later the vertebrate pancreas develop as independent ventral and dorsal buds that eventually fuse to become one organ.[well established][VHOG]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0001374") AnnotationAssertion( "EMAPA:17507") AnnotationAssertion( "FMA:10468") AnnotationAssertion( "MA:0000122") AnnotationAssertion( "NCIT:C12269") AnnotationAssertion(Annotation( "ncithesaurus:Head_of_the_Pancreas") "UMLS:C0227579") AnnotationAssertion( "VHOG:0000448") AnnotationAssertion( "pancreas head") AnnotationAssertion( "pancreatic head") AnnotationAssertion( "right extremity of pancreas") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "caput pancreatis") AnnotationAssertion( "UBERON:0001069") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "head of pancreas") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/f/fe/Illu_pancreas_duodenum.jpg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2-inferred") Annotation( "WP"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (external carotid artery) AnnotationAssertion(Annotation( "MGI:anna"^^xsd:string) "A terminal branch of the left or right common carotid artery which supplies oxygenated blood to to the throat, neck glands, tongue, face, mouth, ear, scalp and dura mater of the meninges[MP].") AnnotationAssertion( "not homologous to the external carotid of zebrafish (Goodrich, 1958) - http://zfish.nichd.nih.gov/zfatlas/Intro%20Page/comparative.html; check XAO") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010218") AnnotationAssertion( "AAO:0010416") AnnotationAssertion( "BTO:0004696") AnnotationAssertion( "EFO:0001953") AnnotationAssertion( "EHDAA2:0000461") AnnotationAssertion( "EMAPA:18611") AnnotationAssertion( "FMA:10635") AnnotationAssertion( "GAID:480") AnnotationAssertion( "MA:0001929") AnnotationAssertion( "MESH:D002342") AnnotationAssertion( "NCIT:C32551") AnnotationAssertion( "OpenCyc:Mx4rwVJkPZwpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:External_Carotid_Artery") "UMLS:C0007275") AnnotationAssertion( "VHOG:0000265") AnnotationAssertion( "XAO:0000345") AnnotationAssertion(Annotation( "AAO:0010218") "external carotid") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "arteria carotis externa") AnnotationAssertion( "UBERON:0001070") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "external carotid artery") AnnotationAssertion(rdfs:seeAlso "https://sourceforge.net/tracker/?func=detail&aid=3486863&group_id=76834&atid=1127722"^^xsd:anyURI) AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/1/13/External_carotid_a.gif"^^xsd:anyURI) SubClassOf(Annotation( "MA"^^xsd:string) ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (superficial cervical artery) AnnotationAssertion(Annotation( ) "It ascends beneath the anterior margin of the trapezius, distributing branches to it, and to the neighboring muscles and lymph glands in the neck, and anastomosing with the superficial branch of the descending branch of the occipital artery.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37117") AnnotationAssertion( "FMA:10665") AnnotationAssertion( "MA:0002052") AnnotationAssertion( "NCIT:C53005") AnnotationAssertion(Annotation( "ncithesaurus:Superficial_Cervical_Artery") "UMLS:C0226271") AnnotationAssertion(Annotation( ) "superficial branch of transverse cervical artery") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001071") AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "The transverse cervical artery splits into two branches, a superficial one and a deep one[WP]") AnnotationAssertion(rdfs:label "superficial cervical artery") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (posterior vena cava) AnnotationAssertion(Annotation( ) Annotation( ) "A vein that carries deoxygenated blood from the lower half of the body into the right atrium of the heart.") AnnotationAssertion(Annotation( "FMA:10951") "Trunk of systemic vein which is formed by the union of the right common iliac vein and the left common iliac vein and terminates in the right atrium[FMA].") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001194") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0072528305 Kardong KV, Vertebrates: Comparative Anatomy, Function, Evolution (2006) p.454-455") "Phylogenetic modifications within this basic pattern of arteries and veins are largely correlated with functional changes. In the transition from water to land, gills gave way to lungs, accompanied by the establishment of a pulmonary circulation. In some fishes and certainly in tetrapods, the cardinal veins become less involved in blood return. Instead, the composite, prominent postcava (posterior vena cava) arose to drain the posterior part of the body and the precava (anterior vena cava) developed to drain the anterior part of the body.[well established][VHOG]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0011083") AnnotationAssertion( "BTO:0002682") AnnotationAssertion( "EHDAA2:0000611") AnnotationAssertion( "EMAPA:18416") AnnotationAssertion( "FMA:10951") AnnotationAssertion( "GAID:548") AnnotationAssertion( "MA:0000480") AnnotationAssertion( "MESH:D014682") AnnotationAssertion( "NCIT:C12815") AnnotationAssertion(Annotation( "ncithesaurus:Inferior_Vena_Cava") "UMLS:C0042458") AnnotationAssertion( "VHOG:0001194") AnnotationAssertion( "XAO:0000388") AnnotationAssertion( "galen:InferiorVenaCava") AnnotationAssertion(Annotation( ) "inferior caval vein") AnnotationAssertion(Annotation( ) "inferior vena cava") AnnotationAssertion(Annotation( ) "posterior vena cava") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "VHOG:0001194") "caudal vena cava") AnnotationAssertion( "postcava") AnnotationAssertion(Annotation( ) Annotation( ) "vena cava inferior") AnnotationAssertion(Annotation( "BTO:0002682") "vena cava inferior") AnnotationAssertion( "UBERON:0001072") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "posterior vena cava") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/4/4d/Gray577.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses(Annotation( "lexical"^^xsd:string) ) # Class: (ileocecal junction) AnnotationAssertion(Annotation( ) "A point along the course of the gastrointestinal tract where the small intestine (ileum) ends as it opens into the cecal portion of the large intestine; occurs usually within the iliac fossa, demarcated internally as the ileocecal orifice.") AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37601") AnnotationAssertion( "FMA:11338") AnnotationAssertion( "MA:0000332") AnnotationAssertion( "ileocaecal junction") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001073") AnnotationAssertion(rdfs:label "ileocecal junction") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pericardial cavity) AnnotationAssertion(Annotation( ) "A potential space between the visceral and parietal layers of the pericardium.") AnnotationAssertion(Annotation( ) ) AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0002220") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "Anatomical space in which the heart is located and is surrounded by the pericardium.[TAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000556") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0471090588 Hildebrand M, Analysis of vertebrate structure (1983) p.205-206") "In hagfishes a transverse septum extends upward from the ventral body wall posterior to the heart, partly separating an anterior pericardial cavity from a larger peritoneal cavity. (...) These basic relationships have not been modified by urodeles. The small pericardial cavity remains far forward where it is separated by a transverse septum from the principal coelom, which may now be called a pleuroperitoneal cavity because slender lungs are present. (...) The heart (of other tetrapods) is separated from the lungs (and liver if present) by more or less horizontal partitions that have their origin in the embryo as folds on the serous membrane of the right and left lateral body walls. These grow out to join in the midline of the body. They are called lateral mesocardia (birds) or pleuropericardial membranes. Posteriorly they join the transverse septum to form the adult pericardial membrane, or pericardium. (...) In their partitioning of their coelom, embryonic mammals resemble first early fishes (incomplete partition, posterior to heart, consisting of the transverse septum) and then reptiles (pericardium derived from transverse septum and pleuropericardial membranes). Mammals then separate paired pleural cavities from the peritoneal cavity by a diaphragm. The ventral portion of this organ comes from the transverse septum. The dorsal portion is derived from the dorsal mesentery and from still another pair of outgrowths from the lateral body wall, the pleuroperitoneal membranes.[well established][VHOG]") AnnotationAssertion(Annotation( "ZFA"^^xsd:string) "check ZFA, should actually be thoracic cavity. Note that Hyman defines the cavity as the space between the heart and the sac (but defines the sac as parietal)") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BSA:0000091") AnnotationAssertion( "EHDAA2:0001434") AnnotationAssertion( "EMAPA:16131") AnnotationAssertion( "EMAPA:16132") AnnotationAssertion( "FMA:11350") AnnotationAssertion( "MA:0000053") AnnotationAssertion( "NCIT:C38662") AnnotationAssertion( "TAO:0002220") AnnotationAssertion(Annotation( "ncithesaurus:Pericardial_Cavity") "UMLS:C0225972") AnnotationAssertion( "VHOG:0000556") AnnotationAssertion( "ZFA:0001655") AnnotationAssertion( "galen:PericardialSpace") AnnotationAssertion( "cavity of pericardial sac") AnnotationAssertion(Annotation( ) "pericardial space") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "cavitas pericardiaca") AnnotationAssertion( "UBERON:0001074") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "pericardial cavity") SubClassOf(Annotation( "MA"^^xsd:string) ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "Wikipedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (bony vertebral centrum) AnnotationAssertion(Annotation( ) Annotation( "VSAO:0000183") Annotation( "VSAO:curator"^^xsd:string) "Ossified form of a vertebral centrum, a skeletal element that functionally replaces the notochord[VSAP,modified].") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0000126") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "Centra are represented by mineralized, calcified, or ossified portions that surround the notochord. The autocentrum, present in Danio and all other living teleosts, is formed by direct ossification outside the elastica externa of the notochord (Arratia, 1999).[TAO]") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0000697") Annotation( "AAO"^^xsd:string) Annotation( "AAO:Duellman_and_Trueb_2008") "Cylindrical body of bone, round or oval in cross section, which functionally replaces the notochord.[AAO]") AnnotationAssertion(Annotation( ) "The body is the largest part of a vertebra, and is more or less cylindrical in shape. Its upper and lower surfaces are flattened and rough, and give attachment to the intervertebral fibrocartilages, and each presents a rim around its circumference. In front, the body is convex from side to side and concave from above downward. Behind, it is flat from above downward and slightly concave from side to side. Its anterior surface presents a few small apertures, for the passage of nutrient vessels. On the posterior surface is a single large, irregular aperture, or occasionally more than one, for the exit of the basi-vertebral veins from the body of the vertebra. [WP,unvetted][Wikipedia:Body_of_vertebra].") AnnotationAssertion(Annotation( "2012-09-06"^^xsd:string) Annotation( "VSAO:0000183") Annotation( "VSAO"^^xsd:string) Annotation( "Curator"^^xsd:string) "The vertebral centrum may be cartilaginous, develop as cartilage but be replaced by bone or mineralized, or form directly through intramembranous ossification.[VSAO]") AnnotationAssertion(Annotation( "VSAO") "VSAO definition states it surrounds notochord but not applicable to post-natal.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0000697") AnnotationAssertion( "EMAPA:36588") AnnotationAssertion( "FMA:11945") AnnotationAssertion( "MA:0001457") AnnotationAssertion( "NCIT:C12852") AnnotationAssertion( "OpenCyc:Mx4rvXU4VpwpEbGdrcN5Y29ycA") AnnotationAssertion( "TAO:0000126") AnnotationAssertion(Annotation( "ncithesaurus:Vertebral_Body") "UMLS:C0223084") AnnotationAssertion( "ZFA:0000126") AnnotationAssertion(Annotation( "FMA:11945") "body of vertebra") AnnotationAssertion(Annotation( ) "corpus vertebra") AnnotationAssertion(Annotation( "FMA:11945") "corpus vertebrae (vertebrale)") AnnotationAssertion(Annotation( "FMA:11945") "vertebral body") AnnotationAssertion(Annotation( ) Annotation( ) "arcocentrum") AnnotationAssertion(Annotation( ) Annotation( "ZFA:0000126") "autocentrum") AnnotationAssertion(Annotation( ) "holocentrum") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "PHENOSCAPE:ad"^^xsd:string) Annotation( ) "centra") AnnotationAssertion(Annotation( ) Annotation( ) "corpus vertebrae") AnnotationAssertion(Annotation( "PHENOSCAPE:ad"^^xsd:string) Annotation( ) "vertebral centra") AnnotationAssertion(Annotation( "MA:0001457") "vertebral centrum") AnnotationAssertion( "UBERON:0001075") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "bony vertebral centrum") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/6/63/Corpusvertebrae.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (neural spine) AnnotationAssertion(Annotation( ) Annotation( "TAO:0001336") "An extension of a neural arches dorsal to the neural canal[TAO,modified].") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0000705") Annotation( "AAO"^^xsd:string) Annotation( "AAO:Pugener_and_Maglia_2008") "Elaboration of the mid-dorsal keel into a posterior or posterolateral process.[AAO]") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0001336") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "Neural spines are extensions of neural arches dorsal to the neural canal in the median skeletogenous septum. Neural spines are typically unpaired median structures but can be paired in some instances, e.g., in the abdominal region of basal teleosts such as Leptolepis, Elops, Megalops, and Hiodon).[TAO]") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0000739") Annotation( "AAO"^^xsd:string) Annotation( "AAO:Pugener_2002") "Small, posteriorly directed process at the posterior margin of each neural arch lamina; it is not a neural spine.[AAO]") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0000705") Annotation( "AAO"^^xsd:string) "relationship loss: part_of mid-dorsal keel (AAO:0000735)[AAO]") AnnotationAssertion( "The spinous process of a vertebra is directed backward and downward from the junction of the laminae (in humans), and serves for the attachment of muscles and ligaments. In animals without an erect stance, the process points upward and may slant forward or backward. Spinous processes are exaggerated in some animals, such as the extinct Dimetrodon and Spinosaurus, where they form a sail- or finback. [Wikipedia:Spinous_process]") AnnotationAssertion( "spinous process") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0000705") AnnotationAssertion( "EMAPA:25107") AnnotationAssertion( "FMA:11948") AnnotationAssertion( "MA:0001455") AnnotationAssertion( "NCIT:C116112") AnnotationAssertion( "TAO:0001336") AnnotationAssertion( "ZFA:0001336") AnnotationAssertion( "processus spinosus") AnnotationAssertion( "processus spinosus vertebrae") AnnotationAssertion(Annotation( "FMA:11948") Annotation( ) "spinous process of vertebra") AnnotationAssertion(Annotation( "MA:0001455") "vertebra spinous process") AnnotationAssertion( "uberon") AnnotationAssertion( "neural spine") AnnotationAssertion(Annotation( "ZFA:0001336") Annotation( ) "neural spines") AnnotationAssertion(Annotation( "FMA:11948") "spine of verterba") AnnotationAssertion( "UBERON:0001076") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "neural spine") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/4/48/Processusspinosusvertebrae.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (transverse process of vertebra) AnnotationAssertion(Annotation( ) "The transverse or costal processes of a vertebra, two in number, project one at either side from the point where the lamina joins the pedicle, between the superior and inferior articular processes. They serve for the attachment of muscles and ligaments. [WP,unvetted].") AnnotationAssertion(Annotation( "AAO:0000698") "Projections on each side of the vertebra from the point where the neural arch lamina joins the pedicel for the articulation with the head of a single-headed rib or the upper head of a double-headed rib. Also called diapophyses. They provide surfaces for the attachment of muscles. In anurans, the term transverse process is used in reference to the processes associated with the presacral and postsacral vertebrae.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0000698") AnnotationAssertion( "FMA:11949") AnnotationAssertion( "MA:0001456") AnnotationAssertion( "XAO:0003102") AnnotationAssertion( "processus transversus") AnnotationAssertion( "processus transversus vertebrae") AnnotationAssertion( "transverse process") AnnotationAssertion( "vertebra transverse process") AnnotationAssertion( "uberon") AnnotationAssertion( "diapophyses") AnnotationAssertion( "diapophysis") AnnotationAssertion( "UBERON:0001077") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "transverse process of vertebra") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/a/a1/Processustransversusvertebrae.PNG"^^xsd:anyURI) SubClassOf( ) # Class: (pedicle of vertebra) AnnotationAssertion(Annotation( "ISBN:0-683-40008-8"^^xsd:string) Annotation( "MGI:csmith"^^xsd:string) Annotation( "MP:0004604") "The two short, thick processes, which project backward, one on either side, from the upper part of the body to the laminae.") AnnotationAssertion( "pedicle") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:11950") AnnotationAssertion( "MA:0001458") AnnotationAssertion( "NCIT:C96274") AnnotationAssertion( "OpenCyc:Mx4rvYdjdJwpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Pedicle_of_Vertebral_Arch") "UMLS:C0223080") AnnotationAssertion(Annotation( "FMA:11950") "pedicle of vertebral arch") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) Annotation( ) "pediculus arcus vertebrae") AnnotationAssertion( "vertebra pedicle") AnnotationAssertion(Annotation( "FMA:11950") "vertebral pedicle") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "pediculus arcus vertebrae") AnnotationAssertion(Annotation( ) Annotation( ) "radix arcus vertebrae") AnnotationAssertion( "UBERON:0001078") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "pedicle of vertebra") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/d/d0/Pediculusarcusvertebrae.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (prezygapophysis) AnnotationAssertion(Annotation( "AAO:Pugener_and_Maglia_2008") "Paired processes at the cephalic end of the neural arch. The articular facets of the prezygapophyses face dorsomedially and articulate with the lateroventrally facing facets of the postzygapophyses of the preceding vertebra.") AnnotationAssertion( "TODO - add distinct classes for hemal vs neural?") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0001325") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "Paired, anteromedially directed processes from the neural arches, ligamentously joined to the postzygapophyses of the preceding vertebra.[TAO]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0000703") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37802") AnnotationAssertion( "FMA:11953") AnnotationAssertion( "MA:0001452") AnnotationAssertion( "TAO:0001325") AnnotationAssertion( "ZFA:0001325") AnnotationAssertion( "cranial articular process of vertebra") AnnotationAssertion( "prezygapophysis") AnnotationAssertion( "processus articularis superior") AnnotationAssertion(Annotation( "FMA:11953") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "processus articularis superior vertebrae") AnnotationAssertion(Annotation( "FMA:11953") Annotation( ) "superior articular process of vertebra") AnnotationAssertion( "vertebra cranial articular process") AnnotationAssertion(Annotation( "FMA:11953") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "zygapophysis superior") AnnotationAssertion(Annotation( "ZFA:0001325") Annotation( ) "neural prezygapophysis") AnnotationAssertion(Annotation( "ZFA:0001325") Annotation( ) "neural prezygopophyses") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "TAO:0001325") Annotation( ) "neural prezygapophyses") AnnotationAssertion( "UBERON:0001079") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "prezygapophysis") SubClassOf( ) # Class: (postzygapophysis) AnnotationAssertion(Annotation( "AAO:LAP") "Paired processes at the caudal end of the neural arch. The articular facets of the postzygapophyses face lateroventrally and articulate with the dorsomedially facing facets of the prezygapophyses of the succeeding vertebra.") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0000681") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "Paired, dorsomedially directed processes on the posterior ends of the centra, ligamentously joined to the neural prezygapophyses of the immediately posterior vertebra.[TAO]") AnnotationAssertion( ) AnnotationAssertion( "AAO:0000702") AnnotationAssertion( "EMAPA:35918") AnnotationAssertion( "FMA:11954") AnnotationAssertion( "MA:0001451") AnnotationAssertion( "TAO:0000681") AnnotationAssertion( "ZFA:0000681") AnnotationAssertion( "caudal articular process of vertebra") AnnotationAssertion(Annotation( "FMA:11954") Annotation( ) "inferior articular process of vertebra") AnnotationAssertion(Annotation( "ZFA:0000681") "neural postzygopophysis") AnnotationAssertion( "postzygapophysis") AnnotationAssertion( "processus articularis inferior") AnnotationAssertion(Annotation( "FMA:11954") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "processus articularis inferior vertebrae") AnnotationAssertion( "vertebra caudal articular process") AnnotationAssertion(Annotation( "FMA:11954") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "zygapophysis inferior") AnnotationAssertion(Annotation( "ZFA:0000681") Annotation( ) "neural postzygapophysis") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "TAO:0000681") Annotation( ) "neural postzygapophyses") AnnotationAssertion(Annotation( "TAO:0000681") "neural postzygopophyses") AnnotationAssertion(Annotation( "AAO:0000702") "processus obliquus posterior") AnnotationAssertion( "UBERON:0001080") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "Posteriorly projecting processes allowing de facto contact between consecutive vertebrae (some soft tissues are also present) via articular facets. [PHENOSCAPE:NI]") AnnotationAssertion(rdfs:label "postzygapophysis") SubClassOf( ) # Class: (endocardium of ventricle) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Endocardium that is part of the cardiac ventricle.") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:32747") AnnotationAssertion( "FMA:12148") AnnotationAssertion( "MA:0000079") AnnotationAssertion( "TAO:0002247") AnnotationAssertion( "VHOG:0000607") AnnotationAssertion( "ZFA:0001615") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "cardiac ventricle endocardium") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "endocardium of cardiac ventricle") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "endocardium of heart ventricle") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "endocardium of lower chamber of heart") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "endocardium of ventricle of heart") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "heart ventricle endocardium") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "lower chamber of heart endocardium") AnnotationAssertion( "ventricle endocardium") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "ventricle of heart endocardium") AnnotationAssertion( "ventricular endocardium") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "VHOG:0000607") "ventricle endocardial tissue") AnnotationAssertion( "UBERON:0001081") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "endocardium of ventricle") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (epicardium of ventricle) AnnotationAssertion(Annotation( ) "An epicardial layer that lines a cardiac ventricle.") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0005058") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "The external layer of the ventricle bounding the ventricular myocardium. It is formed by a single layer of mesothelial cells supported by a basal lamina, and imbricated with collagen, fibroblasts, and vascular structures in the subepicardial space. Hu et al. 2001.[TAO]") AnnotationAssertion( "FMA:12150") AnnotationAssertion( "TAO:0005058") AnnotationAssertion( "ZFA:0005058") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "cardiac ventricle epicardium") AnnotationAssertion( "ventricular epicardium") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001082") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "epicardium of ventricle") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (myocardium of ventricle) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Muscular layer of the cardiac ventricle composed of a compact myocardial layer surrounding the trabecular layer.") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0005061") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "Muscular layer of the cardiac ventricle composed of a compact myocardial layer surrounding the trabecular layer Hu et al. 2001.[TAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000604") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0072528305 Kardong KV, Vertebrates: Comparative Anatomy, Function, Evolution (2006) p.481") "As noted, the hearts of birds and mammals have four chambers that arises from the two chambers (atrium and ventricle) of the fish heart.[uncertain][VHOG]") AnnotationAssertion( ) AnnotationAssertion( "EFO:0003088") AnnotationAssertion( "EMAPA:32748") AnnotationAssertion( "FMA:12151") AnnotationAssertion( "MA:0000082") AnnotationAssertion( "TAO:0005061") AnnotationAssertion( "VHOG:0000604") AnnotationAssertion( "ZFA:0005061") AnnotationAssertion( "ventricle myocardium") AnnotationAssertion( "ventricular myocardium") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "VHOG:0000604") "ventricle cardiac muscle") AnnotationAssertion( "UBERON:0001083") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "myocardium of ventricle") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (skin of head) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A zone of skin that is part of a head [Automatically generated definition].") AnnotationAssertion( "TODO - distinguish between entire skin of region and arbitrary zone of skin on region") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:12166") AnnotationAssertion( "FMA:24756") AnnotationAssertion( "MA:0000582") AnnotationAssertion( "NCIT:C52757") AnnotationAssertion(Annotation( "ncithesaurus:Head_Skin") "UMLS:C0205029") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "adult head zone of skin") AnnotationAssertion( "head skin") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "head zone of skin") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "zone of skin of adult head") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "zone of skin of head") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001084") AnnotationAssertion(rdfs:label "skin of head") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (skin of trunk) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A zone of skin that is part of a trunk [Automatically generated definition].") AnnotationAssertion( "TODO - distinguish between entire skin of region and arbitrary zone of skin on region") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37278") AnnotationAssertion( "FMA:12167") AnnotationAssertion( "FMA:23093") AnnotationAssertion( "MA:0000517") AnnotationAssertion( "NCIT:C12295") AnnotationAssertion(Annotation( "ncithesaurus:Skin_of_the_Trunk") "UMLS:C0205031") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "torso zone of skin") AnnotationAssertion( "trunk skin") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "trunk zone of skin") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "zone of skin of torso") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "zone of skin of trunk") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001085") AnnotationAssertion(rdfs:label "skin of trunk") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete articular cartilage) AnnotationAssertion( "UBERON:0010996") AnnotationAssertion( "UBERON:0011002") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001086") AnnotationAssertion(rdfs:comment "obsoleted as it conflated two distinct classes") AnnotationAssertion(rdfs:label "obsolete articular cartilage") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (pleural fluid) AnnotationAssertion(Annotation( "FMA:12273") "Transudate contained in the pleural cavity.") AnnotationAssertion( ) AnnotationAssertion( "BTO:0003080") AnnotationAssertion( "FMA:12273") AnnotationAssertion( "MA:0002532") AnnotationAssertion( "MAT:0000500") AnnotationAssertion( "ncithesaurus:Pleural_Fluid") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001087") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "pleural fluid") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (urine) AnnotationAssertion(Annotation( ) Annotation( ) "Excretion that is the output of a kidney.") AnnotationAssertion( "kidney excreta from some taxa (e.g. in aves) may not be liquid") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0001419") AnnotationAssertion( "CALOHA:TS-1092") AnnotationAssertion( "EFO:0001939") AnnotationAssertion( "EMAPA:36554") AnnotationAssertion( "ENVO:00002047") AnnotationAssertion( "FMA:12274") AnnotationAssertion( "GAID:1189") AnnotationAssertion( "MA:0002545") AnnotationAssertion( "MAT:0000058") AnnotationAssertion( "MESH:D014556") AnnotationAssertion( "MIAA:0000058") AnnotationAssertion( "NCIT:C13283") AnnotationAssertion( "OpenCyc:Mx4rvVjGppwpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Urine") "UMLS:C0042036") AnnotationAssertion( "galen:Urine") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001088") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "urine") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (sweat) AnnotationAssertion(Annotation( "FMA:12275") "Secretion produced by a sweat gland.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0001254") AnnotationAssertion( "ENVO:02000025") AnnotationAssertion( "FMA:12275") AnnotationAssertion( "GAID:1172") AnnotationAssertion( "MA:0002539") AnnotationAssertion( "MESH:D013542") AnnotationAssertion( "NCIT:C13280") AnnotationAssertion( "OpenCyc:Mx4rvVjJtZwpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Sweat") "UMLS:C0038984") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0001254") "skin exudate") AnnotationAssertion( "UBERON:0001089") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "sweat") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (synovial fluid) AnnotationAssertion(Annotation( ) "Joint fluid is a transudate of plasma that is actively secreted by synovial cells.") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0005154") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "Portion of organism substance that is a clear fluid that occupies the space in synovial joints.[TAO]") AnnotationAssertion( "It provides nutrients and lubrication for articular cartilage") AnnotationAssertion( "The fluid contains hyaluronan secreted by fibroblast-like cells in the synovial membrane, lubricin (proteoglycan 4; PRG4) secreted by the surface chondrocytes of the articular cartilage and interstitial fluid filtered from the blood plasma") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0001339") AnnotationAssertion( "CALOHA:TS-0996") AnnotationAssertion( "ENVO:02000039") AnnotationAssertion( "FMA:12277") AnnotationAssertion( "GAID:265") AnnotationAssertion( "MA:0002544") AnnotationAssertion( "MESH:D013582") AnnotationAssertion( "NCIT:C33718") AnnotationAssertion( "TAO:0005154") AnnotationAssertion(Annotation( "ncithesaurus:Synovial_Fluid") "UMLS:C0039097") AnnotationAssertion( "ZFA:0005154") AnnotationAssertion( "galen:SynovialFluid") AnnotationAssertion(Annotation( ) "joint fluid") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001090") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "synovial fluid") SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (calcareous tooth) AnnotationAssertion(Annotation( ) Annotation( ) "Skeletal element within the mouth (or in some species, upper part of the digestive tract) that is composed of dentine and is used in procuring or masticating food.") AnnotationAssertion( "we place ZFA ctb 5 tooth here for now. Consider changing name from calcaeeous tooth. Note that sea cucumbers develop calcareous tooth-like structures") AnnotationAssertion(Annotation( "Wikipedia"^^xsd:string) ) AnnotationAssertion( ) AnnotationAssertion(Annotation( ) ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001733") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "PMID:19266065 Koussoulakou DS, Margaritis LH, Koussoulakos SL, A curriculum vitae of teeth: evolution, generation, regeneration. International Journal of Biological Sciences (2009)") "The ancestor of recent vertebrate teeth was a tooth-like structure on the outer body surface of jawless fishes.[well established][VHOG]") AnnotationAssertion( "dental") AnnotationAssertion(Annotation( ) "absent in living platypus, present in toothed Miocene platypus Obduron dicksoni") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AEO:0000220") AnnotationAssertion( "BTO:0000397") AnnotationAssertion( "CALOHA:TS-1055") AnnotationAssertion( "EFO:0000839") AnnotationAssertion( "EHDAA2:0004605") AnnotationAssertion( "EMAPA:32906") AnnotationAssertion( "EV:0100063") AnnotationAssertion( "FMA:12516") AnnotationAssertion( "GAID:1260") AnnotationAssertion( "MA:0000348") AnnotationAssertion( "MAT:0000041") AnnotationAssertion( "MESH:A14.254.860") AnnotationAssertion( "MIAA:0000041") AnnotationAssertion( "NCIT:C12506") AnnotationAssertion( "OpenCyc:Mx4rvVjUEZwpEbGdrcN5Y29ycA") AnnotationAssertion( "TAO:0001625") AnnotationAssertion(Annotation( "ncithesaurus:Tooth") "UMLS:C0040426") AnnotationAssertion( "VHOG:0001733") AnnotationAssertion( "XAO:0000431") AnnotationAssertion( "ZFA:0000694") AnnotationAssertion(Annotation( ) "dental element") AnnotationAssertion( "dentine containing tooth") AnnotationAssertion( "tooth") AnnotationAssertion( "vertebrate tooth") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001091") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "calcareous tooth") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/1/14/Teeth_by_David_Shankbone.jpg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "XAO-modified") ObjectSomeValuesFrom( )) SubClassOf(Annotation( "ZFA-modified"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "cjm"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (vertebral bone 1) AnnotationAssertion(Annotation( ) "The first vertebral bone in the vertebral column.") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0000709") Annotation( "AAO"^^xsd:string) Annotation( "AAO:Duellman_and_Trueb_1994"^^xsd:string) "First postcranial vertebra, which is modified anteriorly to articulate with the skull.[AAO]") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0001167") Annotation( "TAO"^^xsd:string) Annotation( "TAO:wd"^^xsd:string) "Vertebra that is posteriorly adjacent to the neurocranium.[TAO]") AnnotationAssertion( "1"^^xsd:nonNegativeInteger) AnnotationAssertion( "C1") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0000709") AnnotationAssertion( "EHDAA:10606") AnnotationAssertion( "EMAPA:19431") AnnotationAssertion( "FMA:12519") AnnotationAssertion( "GAID:236") AnnotationAssertion( "MA:0001421") AnnotationAssertion( "MESH:A02.835.232.834.151.213") AnnotationAssertion( "NCIT:C32239") AnnotationAssertion( "TAO:0001167") AnnotationAssertion(Annotation( "ncithesaurus:C1_Vertebra") "UMLS:C0004170") AnnotationAssertion( "ZFA:0001167") AnnotationAssertion( "C1 vertebra") AnnotationAssertion( "atlas") AnnotationAssertion( "atlas (CI)") AnnotationAssertion(Annotation( "FMA:12519") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "atlas [C I]") AnnotationAssertion( "atlas vertebra") AnnotationAssertion(Annotation( "MP:0011576") "cervical atlas") AnnotationAssertion(Annotation( "MA:0001421") Annotation( ) "cervical vertebra 1") AnnotationAssertion( "first cervical vertebra") AnnotationAssertion(Annotation( "TAO:0001167") "vertebra 1") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001092") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "vertebral bone 1") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (vertebral bone 2) AnnotationAssertion(Annotation( ) "The second vertebral bone in the vertebral column.") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0001168") Annotation( "TAO"^^xsd:string) Annotation( "TAO:wd"^^xsd:string) "Vertebra that is posteriorly adjacent to vertebra 1.[TAO]") AnnotationAssertion( "not the same as ZFA term 'axis'") AnnotationAssertion( "2"^^xsd:nonNegativeInteger) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EHDAA:10608") AnnotationAssertion( "EMAPA:19432") AnnotationAssertion( "FMA:12520") AnnotationAssertion( "GAID:237") AnnotationAssertion( "MA:0001422") AnnotationAssertion( "MESH:D001368") AnnotationAssertion( "NCIT:C32240") AnnotationAssertion( "OpenCyc:Mx4rv-zaJJwpEbGdrcN5Y29ycA") AnnotationAssertion( "TAO:0001168") AnnotationAssertion(Annotation( "ncithesaurus:C2_Vertebra") "UMLS:C0004457") AnnotationAssertion( "ZFA:0001168") AnnotationAssertion( "axis (CII)") AnnotationAssertion(Annotation( "FMA:12520") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "axis [C II]") AnnotationAssertion( "axis vertebra") AnnotationAssertion(Annotation( "MP:0004608") "cervical axis") AnnotationAssertion(Annotation( "ZFA:0001168") "vertebra 2") AnnotationAssertion( "C2 vertebra") AnnotationAssertion(Annotation( "MA:0001422") Annotation( ) "cervical vertebra 2") AnnotationAssertion( "second cervical vertebra") AnnotationAssertion( "uberon") AnnotationAssertion( "C2") AnnotationAssertion(Annotation( "MA:0001422") Annotation( ) "axis") AnnotationAssertion( "UBERON:0001093") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "vertebral bone 2") SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (sacral vertebra) AnnotationAssertion(Annotation( ) "A vertebra bone that is part of the sacral region of the vertebral column.") AnnotationAssertion( "todo - AAO placement to be confirmed by AAO curators (the AAO class may also include modified ribs)") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0000552") Annotation( "AAO"^^xsd:string) Annotation( "AAO:Duellman_and_Trueb_1994"^^xsd:string) "Enlarged vertebra with transverse processes (diapophyses), and ocassionally ribs, that are modified and elaborated for support of the pelvic girdle.[AAO]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0000552") AnnotationAssertion( "EMAPA:18336") AnnotationAssertion( "FMA:12526") AnnotationAssertion( "MA:0000313") AnnotationAssertion( "NCIT:C12853") AnnotationAssertion( "OpenCyc:Mx4rv-ZsXpwpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Sacral_Vertebra") "UMLS:C1261045") AnnotationAssertion( "XAO:0003078") AnnotationAssertion( "galen:SacralVertebra") AnnotationAssertion( "sacral segment") AnnotationAssertion( "segment of sacrum") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001094") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "sacral vertebra") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (caudal vertebra) AnnotationAssertion(Annotation( ) "Any vertebral bone that is part of the caudal region of the vertebral column (tail or coccyx).") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0000326") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "Vertebrae bearing a hemal arch and spine. The most posterior caudal vertebrae support the caudal fin and are referred to as preural vertebrae.[TAO]") AnnotationAssertion(Annotation( "MA"^^xsd:string) "we deliberately merge the MA classes as we believe them equivalent") AnnotationAssertion( "UBERON:0006070") AnnotationAssertion(Annotation( "FMA:12527") Annotation( ) "caudal vertebra") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:18374") AnnotationAssertion( "FMA:12527") AnnotationAssertion( "MA:0000310") AnnotationAssertion( "MA:0001420") AnnotationAssertion( "NCIT:C32334") AnnotationAssertion( "OpenCyc:Mx4rv9IEzZwpEbGdrcN5Y29ycA") AnnotationAssertion( "TAO:0000326") AnnotationAssertion(Annotation( "ncithesaurus:Coccygeal_Vertebra") "UMLS:C0223616") AnnotationAssertion( "XAO:0003079") AnnotationAssertion( "ZFA:0000326") AnnotationAssertion( "galen:CoccygealVertebra") AnnotationAssertion(Annotation( ) "caudal vertebrae") AnnotationAssertion( "caudal vertebral bone") AnnotationAssertion( "caudal vertebral bone element") AnnotationAssertion( "coccygeal segment") AnnotationAssertion(Annotation( "FMA:12527") "coccygeal vertebra") AnnotationAssertion(Annotation( ) "fused tail vertebra") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "MA:0001420") "coccygea") AnnotationAssertion(Annotation( "MA:0000310") "tail vertebra") AnnotationAssertion( "UBERON:0001095") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "Taxon notes In zebrafish, Vertebra bearing a hemal arch and spine. The most posterior caudal vertebrae support the caudal fin and are referred to as preural vertebrae") AnnotationAssertion(rdfs:label "caudal vertebra") SubClassOf( ) SubClassOf( ) SubClassOf( ) # Class: (wall of esophagus) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An anatomical wall that is part of a esophagus [Automatically generated definition].") AnnotationAssertion( "EMAPA:35326") AnnotationAssertion( "FMA:12611") AnnotationAssertion( "MA:0002691") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "anatomical wall of esophagus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "anatomical wall of gullet") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "anatomical wall of oesophagus") AnnotationAssertion( "esophageal wall") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "esophagus anatomical wall") AnnotationAssertion( "esophagus wall") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "gullet anatomical wall") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "gullet wall") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "oesophagus anatomical wall") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "oesophagus wall") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "wall of gullet") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "wall of oesophagus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001096") AnnotationAssertion(rdfs:label "wall of esophagus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (axillary lymph node) AnnotationAssertion(Annotation( "ISBN:0-683-40008-8"^^xsd:string) Annotation( "MP:0002340") "The lymph nodes located around the axillary vein that receive lymphatic drainage from the upper or forelimb, scapular region and pectoral region.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:276805") AnnotationAssertion( "MA:0000735") AnnotationAssertion( "NCIT:C12904") AnnotationAssertion(Annotation( "ncithesaurus:Axillary_Lymph_Node") "UMLS:C0729594") AnnotationAssertion( "axillary node") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "nodi lymphoidei axillares") AnnotationAssertion( "UBERON:0001097") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "axillary lymph node") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/7/73/Gray607.png"^^xsd:anyURI) SubClassOf(Annotation( "CL:tm") ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (incisor tooth) AnnotationAssertion(Annotation( ) Annotation( ) "Incisors are the first kind of tooth in heterodont mammals. They are located in the premaxilla above and mandible below. [WP,unvetted].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0001741") AnnotationAssertion( "EHDAA:8011") AnnotationAssertion( "EHDAA:8047") AnnotationAssertion( "EMAPA:32889") AnnotationAssertion( "FMA:12823") AnnotationAssertion( "GAID:1263") AnnotationAssertion( "MA:0000349") AnnotationAssertion( "MESH:A14.254.860.425") AnnotationAssertion( "NCIT:C32769") AnnotationAssertion( "OpenCyc:Mx4rwP1ch5wpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Incisor") "UMLS:C0021156") AnnotationAssertion(Annotation( "MA:0000349") "incisor") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001098") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "Humans normally have eight (8) incisors; Among other animals, some other primates, cats and horses have twelve. Rodents have four, while Foxes have nine. Rabbits and hares (lagomorphs) were once considered rodents, but are distinguished by having eight - one small pair, called 'peg teeth', is located directly behind the most anterior pair. Incisors are used to bite off tough foods, such as red meat") AnnotationAssertion(rdfs:label "incisor tooth") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/4/4c/Gray997.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses( ) DisjointClasses( ) DisjointClasses( ) # Class: (subcostal vein) AnnotationAssertion(Annotation( ) "A vein that runs along the bottom of the lowest rib. Each subcostal vein gives off a posterior (dorsal) branch which has a similar distribution to the posterior ramus of an intercostal artery. [WP,modified].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37189") AnnotationAssertion( "FMA:12845") AnnotationAssertion( "MA:0002222") AnnotationAssertion( "NCIT:C53121") AnnotationAssertion(Annotation( "ncithesaurus:Subcostal_Vein") "UMLS:C0226653") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "vena subcostalis") AnnotationAssertion( "UBERON:0001099") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "subcostal vein") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pectoralis minor) AnnotationAssertion(Annotation( ) "The Pectoralis minor is a thin, triangular muscle, situated at the upper part of the chest, beneath the Pectoralis major. [WP,unvetted].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0001425") AnnotationAssertion( "EHDAA:8313") AnnotationAssertion( "EMAPA:18180") AnnotationAssertion( "FMA:13109") AnnotationAssertion( "MA:0002355") AnnotationAssertion( "NCIT:C33285") AnnotationAssertion(Annotation( "ncithesaurus:Pectoralis_Minor") "UMLS:C0224347") AnnotationAssertion( "VHOG:0000902") AnnotationAssertion( "pectoralis minor muscle") AnnotationAssertion(Annotation( ) "supracoracoideus") AnnotationAssertion(Annotation( ) "supracoracoideus muscle") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "musculus pectoralis minor") AnnotationAssertion( "UBERON:0001100") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "pectoralis minor") AnnotationAssertion( "Pectoralis:minor.png"^^xsd:anyURI) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ) SubClassOf(Annotation( "third to fifth ribs near their costal cartilages") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "medial border and superior surface of the coracoid process of the scapula") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (external jugular vein) AnnotationAssertion(Annotation( ) "The external jugular vein receives the greater part of the blood from the exterior of the cranium and the deep parts of the face, being formed by the junction of the posterior division of the posterior facial with the posterior auricular vein. [WP,unvetted].") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0010508") Annotation( "AAO"^^xsd:string) Annotation( "AAO:BJB"^^xsd:string) "Vein which collects blood from the muscles of the head and tongue and the thyroid gland.[AAO]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010508") AnnotationAssertion( "EHDAA2:0000468") AnnotationAssertion( "EHDAA:9887") AnnotationAssertion( "EMAPA:17875") AnnotationAssertion( "FMA:13110") AnnotationAssertion( "MA:0002156") AnnotationAssertion( "NCIT:C32562") AnnotationAssertion( "OpenCyc:Mx4rvrm0c5wpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:External_Jugular_Vein") "UMLS:C0226543") AnnotationAssertion( "XAO:0000379") AnnotationAssertion( "galen:ExternalJugularVein") AnnotationAssertion( "external jugular venous tree") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "EHDAA2:0000468") "external jugular") AnnotationAssertion(Annotation( ) Annotation( ) "vena jugularis externa") AnnotationAssertion( "UBERON:0001101") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "external jugular vein") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/8/8c/Gray557.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (cartilage of main bronchus) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A cartilage that is part of a main bronchus [Automatically generated definition].") AnnotationAssertion( "EMAPA:19092") AnnotationAssertion( "FMA:13117") AnnotationAssertion( "MA:0001846") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bronchus principalis cartilage") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "cartilage of bronchus principalis") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "cartilage of primary bronchus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "cartilage of principal bronchus") AnnotationAssertion(Annotation( "EMAPA:19092") "cartilaginous ring of main bronchus") AnnotationAssertion( "main bronchial cartilage") AnnotationAssertion( "main bronchus cartilage") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "primary bronchus cartilage") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "principal bronchus cartilage") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001102") AnnotationAssertion(rdfs:label "cartilage of main bronchus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (diaphragm) AnnotationAssertion(Annotation( "MP:0002279") "A thin musculomebranous barrier that separates the abdominal and thoracic cavities. Often used for breathing control.") AnnotationAssertion(Annotation( ) ) AnnotationAssertion(Annotation( "GO:0060539") "The diaphragm is a skeletal muscle that is responsible for contraction and expansion of the lungs[GO].") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000713") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0471384618 Colbert EH, Evolution of the vertebrates: a history of the backboned animals through time (2001) p.278") "The mammals are characterized by a diaphragm, which separates the thoracic portion of the body cavity from the abdominal region and assists in drawing air into the lungs and forcing it out. Modern reptiles lack a muscular diaphragm and it is reasonable to suppose that the diaphragm developed as a new device that made possible a large degree of oxygen intake for active animals. The change may have taken place during the transition from reptile to mammal (...).[well established][VHOG]") AnnotationAssertion( "phrenic") AnnotationAssertion( "The existence of some membrane separating the pharynx from the stomach can be traced widely among the chordates. Thus amphioxus possesses an atrium by which water exits the pharynx, which has been argued (and disputed) to be homologous to structures in ascidians and hagfishes.[3]") AnnotationAssertion( "The urochordate epicardium separates digestive organs from the pharynx and heart, but the anus returns to the upper compartment to discharge wastes through an outgoing siphon (Thoracic_diaphragm#Comparative_anatomy_and_evolution)") AnnotationAssertion( "barrier between thoracic and abdominal cavities; stop gastric contents from refluxing into the oesophagus") AnnotationAssertion( "breathing control") AnnotationAssertion( "originate from the cervical somites, likely C3-C5[PMID:23586979]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0000341") AnnotationAssertion( "CALOHA:TS-0198") AnnotationAssertion( "EFO:0000937") AnnotationAssertion( "EHDAA2:0003495") AnnotationAssertion( "EMAPA:17701") AnnotationAssertion( "EV:0100376") AnnotationAssertion( "FMA:13295") AnnotationAssertion( "GAID:158") AnnotationAssertion( "MA:0001904") AnnotationAssertion( "MAT:0000502") AnnotationAssertion( "MESH:D003964") AnnotationAssertion( "NCIT:C12702") AnnotationAssertion( "OpenCyc:Mx4rvVivz5wpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Diaphragm") "UMLS:C0011980") AnnotationAssertion( "VHOG:0000713") AnnotationAssertion(Annotation( "BTO:0000341") "diaphragm muscle") AnnotationAssertion( "diaphragm of thorax") AnnotationAssertion( "thoracic diaphragm") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0000341") "midriff") AnnotationAssertion(Annotation( "BTO:0000341") "phren") AnnotationAssertion( "UBERON:0001103") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "diaphragm") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "definitional"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (anterior jugular vein) AnnotationAssertion(Annotation( ) "The anterior jugular vein begins near the hyoid bone by the confluence of several superficial veins from the submaxillary region. It descends between the median line and the anterior border of the Sternocleidomastoideus, and, at the lower part of the neck, passes beneath that muscle to open into the termination of the external jugular, or, in some instances, into the subclavian vein. It varies considerably in size, bearing usually an inverse proportion to the external jugular; most frequently there are two anterior jugulars, a right and left; but sometimes only one. Its tributaries are some laryngeal veins, and occasionally a small thyroid vein. Just above the sternum the two anterior jugular veins communicate by a transverse trunk, the venous jugular arch, which receive tributaries from the inferior thyroid veins; each also communicates with the internal jugular. There are no valves in this vein. [WP,unvetted].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37134") AnnotationAssertion( "FMA:13318") AnnotationAssertion( "MA:0002155") AnnotationAssertion( "NCIT:C32094") AnnotationAssertion(Annotation( "ncithesaurus:Anterior_Jugular_Vein") "UMLS:C0226545") AnnotationAssertion( "anterior external jugular vein") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "vena jugularis anterior") AnnotationAssertion( "UBERON:0001104") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "anterior jugular vein") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/f/f8/Gray558.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "Wikipedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA"^^xsd:string) Annotation( "Wikipedia"^^xsd:string) ObjectSomeValuesFrom( )) DisjointClasses(Annotation( "lexical"^^xsd:string) ) # Class: (clavicle bone) AnnotationAssertion(Annotation( ) Annotation( "PHENOSCAPE:ad"^^xsd:string) "A paired dermal or endochondral bone that is part of the pectoral girdle. The clavicle may be in contact with the interclavicle or coracoid and forms an attachment site for pectoral musculature. [PHENOSCAPE:ad].") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0000761") Annotation( "AAO"^^xsd:string) Annotation( "AAO:LAP"^^xsd:string) "Slender, paired bones of intramembranous origin that invest the anterior margins of the procoracoids.[AAO]") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0000761") Annotation( "AAO"^^xsd:string) "relationship loss: part_of zonal element (AAO:0000936)[AAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000849") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0072528305 Kardong KV, Vertebrates: Comparative Anatomy, Function, Evolution (2006) p.330-333 and Figure 9.18") "In early tetrapods, the connecting skull bone, the posttemporal, and adjoining shoulder bones, supracleithrum and postcleithrum (=anocleithrum), are absent, leaving a dermal shoulder girdle composed of the remaining ventral elements: the paired cleithrum and clavicle, and an unpaired midventral interclavicle that joins both halves of the girdle across the midline. (...) Several dermal elements of the shoulder persist in early synapsids. The clavicle and interclavicle are present in therapsids and monotremes, but in marsupials and placentals, the interclavicle is absent, the clavicle often is reduced in size, and the scapula becomes the predominant shoulder element.[well established][VHOG]") AnnotationAssertion( "clavicular") AnnotationAssertion( "The clavicle first appears as part of the skeleton in primitive bony fish, where it is associated with the pectoral fin; they also have a bone called the cleithrum. In such fish, the paired clavicles run behind and below the gills on each side, and are joined by a solid symphysis on the fish's underside. They are, however, absent in cartilagenous fish and in the vast majority of living bony fish, including all of the teleosts[ISBN 0-03-910284-X].") AnnotationAssertion(Annotation( "ISBN:978-0-12-319060-4") "In most birds and mammals the clavicles are the only dermal elements in the trunk, and is the only membrane bone associated with the pectoral girdle in these taxa. However, there can be secondary cartilage, or subsequent endochondral ossification, or fusion with endochondral elements. In rodents, the lateral ends of the clavicle are endochondral but the main portion is dermal.") AnnotationAssertion(Annotation( "FMA"^^xsd:string) "FMA and MA differ in whether they consider this part of the shoulder") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0000761") AnnotationAssertion( "EMAPA:18721") AnnotationAssertion( "FMA:13321") AnnotationAssertion( "GAID:182") AnnotationAssertion( "MA:0001329") AnnotationAssertion( "MESH:D002968") AnnotationAssertion( "MFMO:0000047") AnnotationAssertion( "NCIT:C12695") AnnotationAssertion( "OpenCyc:Mx4rvVjijZwpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Clavicle") "UMLS:C0008913") AnnotationAssertion( "VHOG:0000849") AnnotationAssertion( "VSAO:0005031") AnnotationAssertion( "galen:Clavicle") AnnotationAssertion(Annotation( "VSAO:0005031") "clavicle") AnnotationAssertion(Annotation( "VSAO:0005031") "clavicula") AnnotationAssertion( "collar bone") AnnotationAssertion( "collarbone") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001105") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "clavicle bone") AnnotationAssertion( "Pectoral:girdles-en.svg"^^xsd:anyURI) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "mah") Annotation( "ISBN:978-0-12-319060-4") ObjectSomeValuesFrom( )) SubClassOf(Annotation( "from secondary cartilage of fusion") Annotation( "ISBN:978-0-12-319060-4") ObjectSomeValuesFrom( )) # Class: (cephalic vein) AnnotationAssertion(Annotation( ) "A superficial vein of the upper limb that communicates with the basilic vein via the median cubital vein at the elbow and is located in the superficial fascia along the anterolateral surface of the biceps brachii muscle. Superiorly the cephalic vein passes between the deltoid and pectoralis major muscles and through the deltopectoral triangle, where it empties into the axillary vein. It is often visible through the skin, and its location in the deltopectoral groove is fairly consistent, making this site a good candidate for cannulation. It is often referred to as the 'House-man's Friend' for this reason and is generally a good place for cannulaton when a large bore cannula needs to be sited. [WP,modified].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:25075") AnnotationAssertion( "FMA:13324") AnnotationAssertion( "MA:0002092") AnnotationAssertion( "NCIT:C32286") AnnotationAssertion( "OpenCyc:Mx4rwTpbQZwpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Cephalic_Vein") "UMLS:C0226802") AnnotationAssertion( "galen:CephalicVein") AnnotationAssertion( "cephalic vein of forearm") AnnotationAssertion(Annotation( "FMA:13324") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "vena cephalica antebrachii") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "vena cephalica") AnnotationAssertion( "UBERON:0001106") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "cephalic vein") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/b/ba/Gray574.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA/obol"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA/obol"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (sternohyoid muscle) AnnotationAssertion(Annotation( ) "The sternohyoid muscle is a thin, narrow muscle attaching the hyoid bone to the sternum, one of the paired strap muscles of the infrahyoid muscles serving to depress the hyoid bone. It is innervated by the ansa cervicalis. The muscle arises from the posterior border of the medial end of the clavicle, the posterior sternoclavicular ligament, and the upper and posterior part of the manubrium sterni. Passing upward and medially, it is inserted by short tendinous fibers into the lower border of the body of the hyoid bone. [WP,unvetted].") AnnotationAssertion(Annotation( "2012-07-02"^^xsd:string) Annotation( "FEED"^^xsd:string) Annotation( "http://www.feedexp.org"^^xsd:string) "The sternohyoid is a somitic muscle that participates in oral/pharyngeal behaviors and is innervated by the cervical plexus; it attaches to the hyoid appratus and the sternum.[FEED]") AnnotationAssertion(Annotation( "TAO") "Note that as defined here, this structure attaches to the sternum, which is a tetrapod structure. TAO has class 'sternohyoid' as part of mandibular muscle, but no sternum, so excluded here. The TAO/ZFA class has no definition, but the dictionary of icthyology states: 'a large muscle originating on the ventral spine of the postcleithrum and inserting on the sides of the urohyal. It functions in rapid opening of the jaw and expanding the buccal cavity' - a generic way of grouping these is via a hyoid - girdle connection") AnnotationAssertion( "draws hyoid posteriorly.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:19271") AnnotationAssertion( "FMA:13341") AnnotationAssertion( "MA:0002383") AnnotationAssertion( "NCIT:C53044") AnnotationAssertion(Annotation( "ncithesaurus:Sternohyoid") "UMLS:C0224162") AnnotationAssertion( "m. sternohyoideus") AnnotationAssertion(Annotation( ) "sternohyoid") AnnotationAssertion(Annotation( ) "sternohyoideus") AnnotationAssertion(Annotation( ) "sternohyoideus muscle") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "musculus sternohyoideus") AnnotationAssertion(Annotation( ) Annotation( ) "sternohyoidei") AnnotationAssertion( "UBERON:0001107") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "sternohyoid muscle") AnnotationAssertion( "Sternohyoid:muscle.PNG"^^xsd:anyURI) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf(Annotation( "inferred") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "manubrium of sternum") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (omohyoid muscle) AnnotationAssertion(Annotation( ) "The omohyoid muscle is a muscle at the front of the neck that consists of two bellies separated by an intermediate tendon. It belongs to the group of infrahyoid muscles. [WP,unvetted].") AnnotationAssertion(Annotation( "2012-07-02"^^xsd:string) Annotation( "FEED"^^xsd:string) Annotation( "http://www.feedexp.org"^^xsd:string) "The omohyoid is a somitic muscle that participates in oral/pharyngeal behaviors and is innervated by the cervical plexus; it attaches to the hyoid appratus and the scapula.[FEED]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37689") AnnotationAssertion( "FMA:13342") AnnotationAssertion( "MA:0002348") AnnotationAssertion( "NCIT:C52971") AnnotationAssertion(Annotation( "ncithesaurus:Omohyoid") "UMLS:C0224163") AnnotationAssertion( "omohyoid") AnnotationAssertion(Annotation( ) "omohyoideus") AnnotationAssertion(Annotation( ) "omohyoideus muscle") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "musculus omohyoideus") AnnotationAssertion( "UBERON:0001108") AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "interior and superior belly") AnnotationAssertion(rdfs:label "omohyoid muscle") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/b/b0/Gray1210.png"^^xsd:anyURI) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf(Annotation( "inferred") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (sternothyroid muscle) AnnotationAssertion(Annotation( ) "The Sternothyreoideus (or Sternothyroid muscle) is shorter and wider than the Sternohyoideus, beneath which it is situated. It arises from the posterior surface of the manubrium sterni, below the origin of the Sternohyoideus, and from the edge of the cartilage of the first rib, and sometimes that of the second rib, it is inserted into the oblique line on the lamina of the thyroid cartilage. This muscle is in close contact with its fellow at the lower part of the neck, but diverges somewhat as it ascends; it is occasionally traversed by a transverse or oblique tendinous inscription. [WP,unvetted].") AnnotationAssertion(Annotation( "2012-07-02"^^xsd:string) Annotation( "FEED"^^xsd:string) Annotation( "http://www.feedexp.org"^^xsd:string) "The sternothyroid is a somitic muscle that participates in oral/pharyngeal behaviors and is innervated by the cervical plexus; it attaches to the thyroid cartilage and the sternum.[FEED]") AnnotationAssertion( "draws larynx caudally") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:19272") AnnotationAssertion( "FMA:13343") AnnotationAssertion( "MA:0002386") AnnotationAssertion( "NCIT:C53070") AnnotationAssertion(Annotation( "ncithesaurus:Sternothyroid") "UMLS:C0224166") AnnotationAssertion( "sternothyroid") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "musculus sternothyroideus") AnnotationAssertion(Annotation( ) "sterno-thyroideus") AnnotationAssertion(Annotation( ) Annotation( ) "sternothyreoidei") AnnotationAssertion(Annotation( ) "sternothyreoideus") AnnotationAssertion(Annotation( ) "sternothyroideus") AnnotationAssertion( "UBERON:0001109") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "sternothyroid muscle") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/1/10/Sternothyroideus.png"^^xsd:anyURI) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf(Annotation( "inferred") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (thyrohyoid muscle) AnnotationAssertion(Annotation( ) "The thyrohyoid muscle is a small, quadrilateral muscle appearing like an upward continuation of the Sternothyreoideus. It belongs to the infrahyoid muscles group. It arises from the oblique line on the lamina of the thyroid cartilage, and is inserted into the lower border of the greater cornu of the hyoid bone. [WP,unvetted].") AnnotationAssertion(Annotation( "2012-07-02"^^xsd:string) Annotation( "FEED"^^xsd:string) Annotation( "http://www.feedexp.org"^^xsd:string) "The thyrohyoid is a somitic muscle that participates in oral/pharyngeal behaviors and is innervated by C1 and Cranial Nerve XII ; it attaches to the thyroid cartilage and the hyoid apparatus.[FEED]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:19273") AnnotationAssertion( "FMA:13344") AnnotationAssertion( "MA:0002393") AnnotationAssertion( "NCIT:C53178") AnnotationAssertion(Annotation( "ncithesaurus:Thyrohyoid") "UMLS:C0224167") AnnotationAssertion(Annotation( ) "thyrohyoid") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "musculus thyrohyoideus") AnnotationAssertion(Annotation( ) "thyreohyoideus") AnnotationAssertion(Annotation( ) "thyreohyoideus muscle") AnnotationAssertion(Annotation( ) "thyrohyoideus") AnnotationAssertion( "UBERON:0001110") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "thyrohyoid muscle") AnnotationAssertion( "Thyrohyoid:muscle.PNG"^^xsd:anyURI) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf(Annotation( "first cervical nerve via hypoglossal nerve") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "first cervical nerve via hypoglossal nerve") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (intercostal muscle) AnnotationAssertion(Annotation( "MESH:A02.633.567.900.500") Annotation( "MGI:csmith"^^xsd:string) Annotation( "MP:0002280") "The respiratory muscles that arise from the lower border of one rib and insert into the upper border of the adjoining rib.") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000903") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0262112789 Kent RD, The MIT Encyclopedia of Communication Disorders (20039 p.56") "Inspiration by active expansion of the thorax evolved later, in the ancestor of reptiles, birds, and mammals. This was powered originally by the intercostal muscles (as in lizards or crocodilians) and later (in mammals only) by a muscular diaphragm.[well established][VHOG]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0005281") AnnotationAssertion( "EFO:0001368") AnnotationAssertion( "EHDAA2:0000841") AnnotationAssertion( "EHDAA:5988") AnnotationAssertion( "EMAPA:18521") AnnotationAssertion( "FMA:13354") AnnotationAssertion( "GAID:159") AnnotationAssertion( "MA:0002324") AnnotationAssertion( "MA:0003165") AnnotationAssertion( "MESH:D007366") AnnotationAssertion( "NCIT:C32824") AnnotationAssertion( "OpenCyc:Mx4rwQo8QJwpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Intercostal_Muscle") "UMLS:C0021724") AnnotationAssertion( "VHOG:0000903") AnnotationAssertion(Annotation( "FMA:13354") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "musculus intercostalis") AnnotationAssertion( "uberon") AnnotationAssertion( "intercostales") AnnotationAssertion( "respiratory muscle") AnnotationAssertion( "rib muscle") AnnotationAssertion( "UBERON:0001111") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "intercostal muscle") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/f/f2/Gray411.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "ribs 1-11") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "ribs 2-12") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (latissimus dorsi muscle) AnnotationAssertion(Annotation( ) "The latissimus dorsi is the larger, flat, dorso-lateral muscle on the trunk, posterior to the arm, and partly covered by the trapezius on its median dorsal region. [WP,unvetted].") AnnotationAssertion( "In humans it inserts along a roughened line deep in the groove. In other mammals (most, I believe) it is an actual projection, the latissimus dorsi process [FEED:rd] [https://github.com/obophenotype/uberon/issues/1192]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EFO:0003067") AnnotationAssertion( "EHDAA2:0000932") AnnotationAssertion( "EHDAA:8307") AnnotationAssertion( "EMAPA:18178") AnnotationAssertion( "FMA:13357") AnnotationAssertion( "MA:0002331") AnnotationAssertion( "NCIT:C33150") AnnotationAssertion(Annotation( "ncithesaurus:Musculus_Latissimus_Dorsi") "UMLS:C0224362") AnnotationAssertion( "VHOG:0000930") AnnotationAssertion( "dorsal latissimus muscle") AnnotationAssertion(Annotation( ) "latissimi dorsi") AnnotationAssertion( "latissimus dorsi") AnnotationAssertion( "musculus latissimus dorsi") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "musculus latissimus dorsi") AnnotationAssertion( "UBERON:0001112") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "Dorsal group[Kardong]") AnnotationAssertion(rdfs:label "latissimus dorsi muscle") AnnotationAssertion( "Latissimus:dorsi.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "spinous processes of thoracic T7-T12 thoracolumbar fascia iliac crest and inferior 3 or 4 ribs inferior angle of scapula") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "floor of intertubercular groove of the humerus") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (lobe of liver) AnnotationAssertion(Annotation( ) "Traditional gross anatomy divided the liver into four lobes based on surface features. The falciform ligament is visible on the front (anterior side) of the liver. This divides the liver into a left anatomical lobe, and a right anatomical lobe.") AnnotationAssertion( "some work needs to be done to ensure the child terms of this class have correct isa/partof placement. in MA they are subclasses, in FMA they are parts") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:18306") AnnotationAssertion( "FMA:13361") AnnotationAssertion( "MA:0000360") AnnotationAssertion( "NCIT:C49579") AnnotationAssertion(Annotation( "ncithesaurus:Liver_Lobe") "UMLS:C0447541") AnnotationAssertion( "hepatic lobe") AnnotationAssertion( "liver lobe") AnnotationAssertion( "lobus hepatis") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001113") AnnotationAssertion(rdfs:label "lobe of liver") SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (right lobe of liver) AnnotationAssertion(Annotation( ) "The right lobe is much larger than the left; the proportion between them being as six to one. It occupies the right hypochondrium, and is separated from the left lobe on its upper surface by the falciform ligament; on its under and posterior surfaces by the left sagittal fossa; and in front by the umbilical notch. It is of a somewhat quadrilateral form, its under and posterior surfaces being marked by three fossæ: the porta and the fossæ for the gall-bladder and inferior vena cava, which separate its left part into two smaller lobes; the quadrate and caudate lobes. [WP,unvetted].") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0005173") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "Portion of the liver which develops on the fish's right side adjacent to the gall bladder.[TAO]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0001008") AnnotationAssertion( "EHDAA:4001") AnnotationAssertion( "EMAPA:18311") AnnotationAssertion( "FMA:13362") AnnotationAssertion( "MA:0000363") AnnotationAssertion( "NCIT:C33481") AnnotationAssertion( "TAO:0005173") AnnotationAssertion(Annotation( "ncithesaurus:Right_Lobe_of_the_Liver") "UMLS:C0227481") AnnotationAssertion( "VHOG:0001424") AnnotationAssertion( "ZFA:0005173") AnnotationAssertion( "liver right lobe") AnnotationAssertion(Annotation( ) "lobus hepaticus dexter") AnnotationAssertion(Annotation( "ZFA:0005173") "right liver lobe") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "TAO:0005173") "2nd lobe") AnnotationAssertion(Annotation( "ZFA:0005173") Annotation( ) "gall bladder lobe") AnnotationAssertion(Annotation( ) Annotation( ) "lobus hepatis dexter") AnnotationAssertion(Annotation( "EMAPA:18311") "right hepatic lobe") AnnotationAssertion(Annotation( "TAO:0005173") "second lobe") AnnotationAssertion( "UBERON:0001114") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "right lobe of liver") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/a/a3/Gray1087-liver.png"^^xsd:anyURI) SubClassOf( ) # Class: (left lobe of liver) AnnotationAssertion(Annotation( ) "The left lobe is smaller and more flattened than the right. It is situated in the epigastric and left hypochondriac regions. Its upper surface is slightly convex and is moulded on to the diaphragm; its under surface presents the gastric impression and omental tuberosity. [WP,unvetted].") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0005172") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "Portion of the liver which develops on the fish's left side.[TAO]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0001000") AnnotationAssertion( "EHDAA:3995") AnnotationAssertion( "EMAPA:18307") AnnotationAssertion( "FMA:13363") AnnotationAssertion( "MA:0000361") AnnotationAssertion( "NCIT:C32965") AnnotationAssertion( "TAO:0005172") AnnotationAssertion(Annotation( "ncithesaurus:Left_Lobe_of_the_Liver") "UMLS:C0227486") AnnotationAssertion( "VHOG:0001423") AnnotationAssertion( "ZFA:0005172") AnnotationAssertion( "left liver lobe") AnnotationAssertion( "liver left lobe") AnnotationAssertion(Annotation( ) "lobus hepaticus sinister") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "EMAPA:18307") "left hepatic lobe") AnnotationAssertion(Annotation( ) Annotation( ) "lobus hepatis sinister") AnnotationAssertion( "UBERON:0001115") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "left lobe of liver") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/a/a3/Gray1087-liver.png"^^xsd:anyURI) SubClassOf( ) # Class: (quadrate lobe of liver) AnnotationAssertion(Annotation( ) "The quadrate lobe is an area of the liver situated on the under surface of the right lobe, bounded in front by the anterior margin of the liver; behind by the porta hepatis; on the right, by the fossa for the gall-bladder; and on the left, by the fossa for the umbilical vein. It is oblong in shape, its antero-posterior diameter being greater than its transverse. [WP,unvetted].") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000509") Annotation( "VHOG"^^xsd:string) Annotation( ) "The portion of the right lobe of the liver between the gall bladder, the porta hepatis, the round ligament and the lower margin of the organ. [Dorian_AF, Elsevier's_encyclopaedic_dictionary_of_medicine, Part_B:_Anatomy_(1988)_Amsterdam_etc.:_Elsevier][VHOG]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0001012") AnnotationAssertion( "EHDAA:8082") AnnotationAssertion( "EMAPA:18318") AnnotationAssertion( "FMA:13364") AnnotationAssertion( "MA:0000365") AnnotationAssertion( "NCIT:C33001") AnnotationAssertion( "VHOG:0000509") AnnotationAssertion( "liver quadrate lobe") AnnotationAssertion( "lobus quadratus") AnnotationAssertion(Annotation( "FMA:13364") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "lobus quadratus hepatis") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "lobus quadratus") AnnotationAssertion( "UBERON:0001116") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "quadrate lobe of liver") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/a/a3/Gray1087-liver.png"^^xsd:anyURI) SubClassOf( ) # Class: (caudate lobe of liver) AnnotationAssertion(Annotation( ) "The caudate lobe (posterior hepatic segment I, Spigelian lobe) is situated upon the postero-superior surface of the liver on the right lobe of the liver, opposite the tenth and eleventh thoracic vertebrae. It is bounded on the left side by the physiological division of the liver called the ligamentum venosum. It is bounded, below, by the porta; on the right, by the fossa for the inferior vena cava; and, on the left, by the fossa for the ductus venosus. It looks backward, being nearly vertical in position; it is longer from above downward than from side to side, and is somewhat concave in the transverse direction. The caudate process is a small elevation of the hepatic substance extending obliquely and laterally, from the lower extremity of the caudate lobe to the under surface of the right lobe. It is situated behind the porta, and separates the fossa for the gall-bladder from the commencement of the fossa for the inferior vena cava. Budd-Chiari syndrome, caused by occlusion of hepatic venous outflow, can lead to hypertrophy of the caudate lobe due to its own caval anastomosis that allows for continued function of this lobe of the liver. [WP,unvetted].") AnnotationAssertion( "Check left vs right in mouse and human") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000508") Annotation( "VHOG"^^xsd:string) Annotation( ) "The portion of the right lobe of the liver between the fissure of the ligamentum venosum and the bare area of the liver. It ends into the superior recess of the lesser peritoneal sac. [Dorian_AF, Elsevier's_encyclopaedic_dictionary_of_medicine, Part_B:_Anatomy_(1988)_Amsterdam_etc.:_Elsevier][VHOG]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000508") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "PMID:1610084 Van Minh T, Galizia G, Lieto E, Anatomy of the caudate lobe of the liver. New aspects and surgical applications. (Article in French) Annales de chirurgie (1992)") "The caudate lobe is the only real and constant hepatic lobe of mammals (...) .[well established][VHOG]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0001005") AnnotationAssertion( "EHDAA:6990") AnnotationAssertion( "EMAPA:18313") AnnotationAssertion( "FMA:13365") AnnotationAssertion( "MA:0000364") AnnotationAssertion( "NCIT:C33000") AnnotationAssertion(Annotation( "ncithesaurus:Lobus_Caudatus") "UMLS:C0227489") AnnotationAssertion( "VHOG:0000508") AnnotationAssertion( "Spiegelian lobe") AnnotationAssertion( "Spigel lobe") AnnotationAssertion(Annotation( "FMA:13365") "couinaud hepatic segment I") AnnotationAssertion( "hepatovenous segment I") AnnotationAssertion( "liver caudate lobe") AnnotationAssertion(Annotation( ) "lobus caudatus") AnnotationAssertion(Annotation( "FMA:13365") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "lobus caudatus hepatis") AnnotationAssertion(Annotation( "FMA:13365") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "pars posterior hepatis") AnnotationAssertion( "posterior hepatic segment i") AnnotationAssertion( "posterior liver") AnnotationAssertion( "posterior part of liver") AnnotationAssertion( "segment I of liver") AnnotationAssertion(Annotation( "FMA:13365") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "segmentum hepatis I") AnnotationAssertion( "uberon") AnnotationAssertion( "liver caudate process") AnnotationAssertion(Annotation( ) Annotation( ) "segment hepatis posterius I") AnnotationAssertion( "UBERON:0001117") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "caudate lobe of liver") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/a/a3/Gray1087-liver.png"^^xsd:anyURI) SubClassOf(Annotation( "MA"^^xsd:string) ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (lobe of thyroid gland) AnnotationAssertion(Annotation( ) "A lobe of tissue that is part of a thyroid gland.") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000732") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( ) "Thus, a thyroid capable of forming iodotyrosines and iodothyronines is present in all vertebrates. (...) Certain morphologic changes occur after the biochemical evolution of the thyroid has ceased. In the adult lamprey and in most bony fishes, the gland is not encapsulated. (...) In cartilaginous fish, the thyroid is encapsulated. In the higher vertebrate forms, the thyroid is a one- or two-lobed encapsulated structure.[well established][VHOG]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0002032") AnnotationAssertion( "EMAPA:18196") AnnotationAssertion( "FMA:13367") AnnotationAssertion( "MA:0000131") AnnotationAssertion( "NCIT:C33784") AnnotationAssertion(Annotation( "ncithesaurus:Thyroid_Gland_Lobe") "UMLS:C0447647") AnnotationAssertion( "VHOG:0000732") AnnotationAssertion( "lobus (glandula thyroidea)") AnnotationAssertion(Annotation( "FMA:13367") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "lobus glandulae thyroideae") AnnotationAssertion( "thyroid gland lobe") AnnotationAssertion( "thyroid lobe") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "lobuli glandulae thyroideae") AnnotationAssertion( "UBERON:0001118") AnnotationAssertion(rdfs:comment "The lobes of the thyroid gland are conical in shape, the apex of each being directed upward and lateralward as far as the junction of the middle with the lower third of the thyroid cartilage; the base looks downward, and is on a level with the fifth or sixth tracheal ring. Each lobe is about 5 cm. long; its greatest width is about 3 cm. , and its thickness about 2 cm. The lateral or superficial surface is convex, and covered by the skin, the superficial and deep fasciæ, the Sternocleidomastoideus, the superior belly of the Omohyoideus, the Sternohyoideus and Sternothyreoideus, and beneath the last muscle by the pretracheal layer of the deep fascia, which forms a capsule for the gland. The deep or medial surface is moulded over the underlying structures, viz. , the thyroid and cricoid cartilages, the trachea, the Constrictor pharyngis inferior and posterior part of the Cricothyreoideus, the esophagus (particularly on the left side of the neck), the superior and inferior thyroid arteries, and the recurrent nerves. The anterior border is thin, and inclines obliquely from above downward toward the middle line of the neck, while the posterior border is thick and overlaps the common carotid artery, and, as a rule, the parathyroids") AnnotationAssertion(rdfs:label "lobe of thyroid gland") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/9/9e/Gray1174.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "FMA-abduced-lr"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (right lobe of thyroid gland) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A lobe of thyroid gland that is in the right side of a thyroid gland.") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000733") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( ) "Thus, a thyroid capable of forming iodotyrosines and iodothyronines is present in all vertebrates. (...) Certain morphologic changes occur after the biochemical evolution of the thyroid has ceased. In the adult lamprey and in most bony fishes, the gland is not encapsulated. (...) In cartilaginous fish, the thyroid is encapsulated. In the higher vertebrate forms, the thyroid is a one- or two-lobed encapsulated structure.[well established][VHOG]") AnnotationAssertion( "https://github.com/obophenotype/uberon/wiki/Modeling-paired-structures-Design-Pattern"^^xsd:anyURI) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0001759") AnnotationAssertion( "EMAPA:18198") AnnotationAssertion( "FMA:13368") AnnotationAssertion( "MA:0000729") AnnotationAssertion( "NCIT:C33491") AnnotationAssertion(Annotation( "ncithesaurus:Right_Thyroid_Gland_Lobe") "UMLS:C0229581") AnnotationAssertion( "VHOG:0000733") AnnotationAssertion( "lobus dexter (glandula thyroidea)") AnnotationAssertion( "right thyroid lobe") AnnotationAssertion( "thyroid gland right lobe") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001119") AnnotationAssertion(rdfs:label "right lobe of thyroid gland") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (left lobe of thyroid gland) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A lobe of thyroid gland that is in the left side of a thyroid gland.") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000734") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( ) "Thus, a thyroid capable of forming iodotyrosines and iodothyronines is present in all vertebrates. (...) Certain morphologic changes occur after the biochemical evolution of the thyroid has ceased. In the adult lamprey and in most bony fishes, the gland is not encapsulated. (...) In cartilaginous fish, the thyroid is encapsulated. In the higher vertebrate forms, the thyroid is a one- or two-lobed encapsulated structure.[well established][VHOG]") AnnotationAssertion( "https://github.com/obophenotype/uberon/wiki/Modeling-paired-structures-Design-Pattern"^^xsd:anyURI) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0000965") AnnotationAssertion( "EMAPA:18197") AnnotationAssertion( "FMA:13369") AnnotationAssertion( "MA:0000728") AnnotationAssertion( "NCIT:C32973") AnnotationAssertion(Annotation( "ncithesaurus:Left_Thyroid_Gland_Lobe") "UMLS:C0229582") AnnotationAssertion( "VHOG:0000734") AnnotationAssertion( "left thyroid lobe") AnnotationAssertion( "lobus sinister (glandula thyroidea)") AnnotationAssertion( "thyroid gland left lobe") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001120") AnnotationAssertion(rdfs:label "left lobe of thyroid gland") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (longus colli muscle) AnnotationAssertion(Annotation( ) "The Longus colli muscle is a muscle of the human body. The Longus colli is situated on the anterior surface of the vertebral column, between the atlas and the third thoracic vertebra. It is broad in the middle, narrow and pointed at either end, and consists of three portions, a superior oblique, an inferior oblique, and a vertical. The superior oblique portion arises from the anterior tubercles of the transverse processes of the third, fourth, and fifth cervical vertebræ and, ascending obliquely with a medial inclination, is inserted by a narrow tendon into the tubercle on the anterior arch of the atlas. The inferior oblique portion, the smallest part of the muscle, arises from the front of the bodies of the first two or three thoracic vertebræ; and, ascending obliquely in a lateral direction, is inserted into the anterior tubercles of the transverse processes of the fifth and sixth cervical vertebræ. The vertical portion arises, below, from the front of the bodies of the upper three thoracic and lower three cervical vertebræ, and is inserted into the front of the bodies of the second, third, and fourth cervical vertebræ. [WP,unvetted].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37654") AnnotationAssertion( "FMA:13370") AnnotationAssertion( "MA:0002341") AnnotationAssertion( "NCIT:C52959") AnnotationAssertion(Annotation( "ncithesaurus:Longus_Colli") "UMLS:C0224169") AnnotationAssertion(Annotation( "MA:0002341") "longus colli") AnnotationAssertion(Annotation( ) "longus colli muscle") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "longi colli") AnnotationAssertion(Annotation( ) Annotation( ) "musculus longus colli") AnnotationAssertion( "UBERON:0001121") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "longus colli muscle") AnnotationAssertion( "Longus:colli.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "FMA-modified") ObjectSomeValuesFrom( )) SubClassOf(Annotation( "Transverse processes of C-5 to T-3") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (scalenus medius) AnnotationAssertion(Annotation( ) "The Scalenus medius, the largest and longest of the three scalene muscles, arises from the posterior tubercles of the transverse processes of the lower six cervical vertebræ. It descendes along the side of the vertebral column to insert by a broad attachment into the upper surface of the first rib, between the tubercle and the subclavian groove. The brachial plexus and the subclavian artery pass anterior to it. Because it elevates the upper ribs, the middle scalene muscle is also one of the accessory muscles of respiration. [WP,unvetted].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37738") AnnotationAssertion( "FMA:13386") AnnotationAssertion( "MA:0002370") AnnotationAssertion( "NCIT:C52986") AnnotationAssertion(Annotation( "ncithesaurus:Scalenus_Medius") "UMLS:C0224174") AnnotationAssertion( "medial scalene muscle") AnnotationAssertion( "middle scalene") AnnotationAssertion(Annotation( "FMA:13386") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "musculus scalenus medius") AnnotationAssertion( "scalenus medius muscle") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "musculus scalenus medius") AnnotationAssertion( "UBERON:0001122") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "scalenus medius") AnnotationAssertion( "Scalenus:medius.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "Ventral rami of the third to eighth cervical spinal nerves") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (scalenus posterior) AnnotationAssertion(Annotation( ) "The Scalenus posterior (Scalenus posticus), the smallest and most deeply seated of the three Scaleni, arises, by two or three separate tendons, from the posterior tubercles of the transverse processes of the lower two or three cervical vertebræ, and is inserted by a thin tendon into the outer surface of the second rib, behind the attachment of the serratus ventralis. It is occasionally blended with the Scalenus medius. [WP,unvetted].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37737") AnnotationAssertion( "FMA:13387") AnnotationAssertion( "MA:0002369") AnnotationAssertion( "NCIT:C52985") AnnotationAssertion(Annotation( "ncithesaurus:Scalenus_Dorsalis") "UMLS:C1710019") AnnotationAssertion(Annotation( "FMA:13387") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "musculus scalenus posterior") AnnotationAssertion( "posterior scalene") AnnotationAssertion( "posterior scalene muscle") AnnotationAssertion( "scalenus dorsalis") AnnotationAssertion( "scalenus dorsalis muscle") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "musculus scalenus posterior") AnnotationAssertion( "UBERON:0001123") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "scalenus posterior") AnnotationAssertion( "Scalenus:posterior.png"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "transverse processes of C4 - C6") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) DisjointClasses(Annotation( "lexical"^^xsd:string) ) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (serratus ventralis) AnnotationAssertion(Annotation( ) "The serratus ventralis is a muscle that originates on the surface of the upper eight or nine ribs at the side of the chest and inserts along the entire anterior length of the medial border of the scapula. [WP,unvetted].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0001832") AnnotationAssertion( "EHDAA:9463") AnnotationAssertion( "EMAPA:18525") AnnotationAssertion( "FMA:13397") AnnotationAssertion( "MA:0002378") AnnotationAssertion( "NCIT:C53014") AnnotationAssertion( "OpenCyc:Mx4rvWn_D5wpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Serratus_Ventralis") "UMLS:C1710059") AnnotationAssertion( "VHOG:0000679") AnnotationAssertion( "Boxer's muscle") AnnotationAssertion(Annotation( "VHOG:0000679") "serratus anterior") AnnotationAssertion( "serratus anterior muscle") AnnotationAssertion( "serratus ventralis muscle") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "musculus serratus anterior") AnnotationAssertion(Annotation( ) Annotation( ) "serratus lateralis") AnnotationAssertion( "UBERON:0001125") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "serratus ventralis") AnnotationAssertion( "Serratus:anterior.png"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "long thoracic nerve") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "fleshy slips from the outer surface of upper 8 or 9 ribs") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "costal aspect of medial margin of the scapula") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (serratus dorsalis superior muscle) AnnotationAssertion(Annotation( ) "The serratus dorsalis superior is a thin, quadrilateral muscle, situated at the upper and back part of the thorax. It arises by a thin and broad aponeurosis from the lower part of the ligamentum nuchae, from the spinous processes of the seventh cervical and upper two or three thoracic vertebræ and from the supraspinal ligament. Inclining downward and lateralward it becomes muscular, and is inserted, by four fleshy digitations, into the upper borders of the second, third, fourth, and fifth ribs, a little beyond their angles. [WP,unvetted].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37698") AnnotationAssertion( "FMA:13401") AnnotationAssertion( "MA:0002377") AnnotationAssertion( "NCIT:C53012") AnnotationAssertion(Annotation( "ncithesaurus:Serratus_Dorsalis_Cranialis") "UMLS:C1710058") AnnotationAssertion(Annotation( "MA:0002377") "serratus dorsalis cranialis") AnnotationAssertion( "serratus dorsalis cranialis muscle") AnnotationAssertion(Annotation( "FMA:13401") "serratus posterior superior") AnnotationAssertion( "superior serratus dorsalis") AnnotationAssertion(Annotation( "FMA:13401") "superior serratus posterior") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001126") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "serratus dorsalis superior muscle") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "C7 thru T3 in human") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (serratus dorsalis inferior muscle) AnnotationAssertion(Annotation( ) "A muscle that originates from the vertebrae and inserts in the ribs.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37697") AnnotationAssertion( "FMA:13402") AnnotationAssertion( "MA:0002376") AnnotationAssertion( "NCIT:C53007") AnnotationAssertion(Annotation( "ncithesaurus:Serratus_Dorsalis_Caudalis") "UMLS:C1711277") AnnotationAssertion( "inferior serratus dorsalis") AnnotationAssertion(Annotation( "FMA:13402") "inferior serratus posterior") AnnotationAssertion( "serratus dorsalis caudalis") AnnotationAssertion(Annotation( "FMA:13402") "serratus posterior inferior") AnnotationAssertion( "uberon") AnnotationAssertion( "posterior serratus") AnnotationAssertion(Annotation( "MA:0002376") "serratus posterior inferior") AnnotationAssertion( "UBERON:0001127") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "serratus dorsalis inferior muscle") AnnotationAssertion( "Serratus:posterior.PNG"^^xsd:anyURI) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf(Annotation( "T11 through L2 in human") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (sternocleidomastoid) AnnotationAssertion(Annotation( ) "A paired muscle in the superficial layers of the anterior portion of the neck. It acts to flex and rotate the head. It also acts as an accessory muscle of inspiration, along with the scalene muscles of the neck. [WP,unvetted].") AnnotationAssertion( "TODO: sternocleidomastoid = sternomastoid + Cleidomastoideus. Origin: from manubrium sterni (sterno) and clavicle (cleido) and it's insertion at the mastoid process of the temporal bone.") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000853") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0030223693 Liem KF, Bemis WE, Walker WF, Grande L, Functional Anatomy of the Vertebrates: An Evolutionary Perspective (2001) p.345") "The sternomastoid and the three parts of the trapezius are branchiomeric muscles that have secondarily acquired an attachment to the pectoral girdle. They evolved from the fish cucullaris.[well established][VHOG]") AnnotationAssertion(Annotation( ) "SCM") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0005125") AnnotationAssertion( "EMAPA:25137") AnnotationAssertion( "FMA:13407") AnnotationAssertion( "MA:0002384") AnnotationAssertion( "NCIT:C33616") AnnotationAssertion( "OpenCyc:Mx4rv2bMg5wpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Sternocleidomastoid_Muscle") "UMLS:C0224153") AnnotationAssertion( "VHOG:0000853") AnnotationAssertion( "sterno-mastoid") AnnotationAssertion(Annotation( "BTO:0005125") "sternocleidomastoid muscle") AnnotationAssertion( "sternomastoid") AnnotationAssertion( "sternomastoid muscle") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "musculus sternocleidomastoideus") AnnotationAssertion(Annotation( ) "sterno-cleido-mastoid") AnnotationAssertion(Annotation( ) "sterno-mastoid") AnnotationAssertion(Annotation( ) "sternocleidomastoid") AnnotationAssertion(Annotation( ) "sternocleidomastoid muscles") AnnotationAssertion(Annotation( ) "sternocleidomastoidei") AnnotationAssertion(Annotation( ) "sternocleidomastoideus") AnnotationAssertion(Annotation( ) "sternocleidomastoideus muscle") AnnotationAssertion(Annotation( ) "sternocleidomastoids") AnnotationAssertion(Annotation( ) "sternomastoid") AnnotationAssertion(Annotation( ) "sternomastoid muscle") AnnotationAssertion(Annotation( ) "supraclavicularis muscle") AnnotationAssertion( "UBERON:0001128") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "sternocleidomastoid") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/6/61/Gray512.png"^^xsd:anyURI) AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/f/f9/Gray512.svg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "sensory: cervical plexus") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "manubrium sterni medial portion of the clavicle") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (subscapularis muscle) AnnotationAssertion(Annotation( ) "The subscapularis is a large triangular muscle which fills the subscapular fossa and inserts into the lesser tubercle of the humerus and the front of the capsule of the shoulder-joint. [WP,unvetted].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0001943") AnnotationAssertion( "EHDAA:8317") AnnotationAssertion( "EMAPA:18181") AnnotationAssertion( "FMA:13413") AnnotationAssertion( "MA:0002388") AnnotationAssertion( "NCIT:C33651") AnnotationAssertion( "OpenCyc:Mx4rviCRIJwpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Subscapularis") "UMLS:C0584884") AnnotationAssertion( "VHOG:0000850") AnnotationAssertion(Annotation( "MA:0002388") "subscapularis") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "musculus subscapularis") AnnotationAssertion(Annotation( "ISBN:0073040584"^^xsd:string) Annotation( ) "subcoracoscapularis") AnnotationAssertion( "UBERON:0001129") AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "Dorsal group[Kardong]; Note from cmungall \"we changed the attachment site to be the scapula (for technical reasons), put it's in the fossa, see https://github.com/obophenotype/uberon/issues/1455\"") AnnotationAssertion(rdfs:label "subscapularis muscle") AnnotationAssertion(rdfs:seeAlso ) AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/f/f2/Gray411.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "Wikipedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "lesser tubercle of humerus") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (vertebral column) AnnotationAssertion(Annotation( ) Annotation( ) Annotation( "VSAO:0000185") "Subdivision of skeletal system that consists of all the vertebra and associated skeletal elements and joints in the body[modified from VSAO].") AnnotationAssertion( "Note that in contrast to VSAO, this is a subset of the skeletal system, and thus includes intervertebral joints, cartilage and ligaments etc. Some ontologies such as AAO seem to purely refer to the skeleton") AnnotationAssertion( ) AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "VSAO:0000185") Annotation( "VSAO"^^xsd:string) Annotation( "VSAO:curator") "Anatomical cluster that consists of all the vertebra in the body.[VSAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001142") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( ) "The vertebral column consists of a series of vertebrae connected by ligaments. It provides a supporting axis for the body and protects the spinal cord. [TFD][VHOG]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001142") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0030223693 Liem KF, Bemis WE, Walker WF, Grande L, Functional Anatomy of the Vertebrates: An Evolutionary Perspective (2001) p.53") "Vertebrata is characterized by three synapomorphies. First, vertebrates have a backbone composed of vertebrae (...).[well established][VHOG]") AnnotationAssertion(Annotation( "FMA:13478") "spine") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0000699") AnnotationAssertion( "AAO:0000734") AnnotationAssertion( "BTO:0000818") AnnotationAssertion( "EFO:0001369") AnnotationAssertion( "EHDA:10119") AnnotationAssertion( "EMAPA:35919") AnnotationAssertion( "FMA:13478") AnnotationAssertion( "GAID:106") AnnotationAssertion( "MA:0002416") AnnotationAssertion( "MESH:D013131") AnnotationAssertion( "NCIT:C12998") AnnotationAssertion( "NCIT:C33588") AnnotationAssertion( "NIF_Subcellular:sao1145756102") AnnotationAssertion( "OpenCyc:Mx4rv2j-CpwpEbGdrcN5Y29ycA") AnnotationAssertion( "OpenCyc:Mx4rv6GF55wpEbGdrcN5Y29ycA") AnnotationAssertion( "OpenCyc:Mx4rvVkFEpwpEbGdrcN5Y29ycA") AnnotationAssertion( "TAO:0001559") AnnotationAssertion(Annotation( "ncithesaurus:Vertebral_Column") "UMLS:C0037949") AnnotationAssertion(Annotation( "ncithesaurus:Spinal_Cord_Column") "UMLS:C1519455") AnnotationAssertion( "VHOG:0001142") AnnotationAssertion( "VSAO:0000185") AnnotationAssertion( "XAO:0003074") AnnotationAssertion( "ZFA:0001559") AnnotationAssertion( "galen:SpinalColumn") AnnotationAssertion(Annotation( "FMA:13478") "backbone") AnnotationAssertion(Annotation( "AAO:0000699") "vertebral column skeleton") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0000818") "columna vertebralis") AnnotationAssertion(Annotation( "BTO:0000818") "dorsal spine") AnnotationAssertion(Annotation( "MESH:A02.835.232.834") "spinal column") AnnotationAssertion( "vertebral region") AnnotationAssertion( "UBERON:0001130") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "vertebral column") SubClassOf( ) SubClassOf(Annotation( "cjm"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (vertebral foramen) AnnotationAssertion(Annotation( ) Annotation( ) "A foramen within a vertebral element through which the spinal cord runs. It is formed by the anterior segment, and the posterior part, the vertebral arch.") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0000729") Annotation( "AAO"^^xsd:string) Annotation( "AAO:LAP"^^xsd:string) "Opening on the vertebra for a spinal nerve as it emerges from the spinal canal.[AAO]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0000729") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37803") AnnotationAssertion( "FMA:13479") AnnotationAssertion( "MA:0001454") AnnotationAssertion( "OpenCyc:Mx4rv_EvQZwpEbGdrcN5Y29ycA") AnnotationAssertion( "vertebra neural canal") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "foramen vertebrale") AnnotationAssertion( "UBERON:0001131") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "vertebral foramen") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/1/10/Foramenvertebrale.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (parathyroid gland) AnnotationAssertion(Annotation( ) Annotation( "ISBN:0-683-40008-8"^^xsd:string) Annotation( "MP:0000678") "The parathyroid gland is an endocrine gland for secretion of parathyroid hormone, usually found as a pair, embedded in the connective tissue capsule on the posterior surface of the thyroid gland. Parathyroid regulates calcium and phosphorous metabolism.") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001188") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( ) "Any one of several small structures, usually four, attached to the dorsal surfaces of the lateral lobes of the thyroid gland. [TFD][VHOG]") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0010545") Annotation( "AAO"^^xsd:string) Annotation( "AAO:BJB"^^xsd:string) "Either of the two pairs of small, spherical, encapsulated glands which develop from ventral growths of the third and fourth pharyngeal pouches and are closely associated with the external jugular veins. Calcitonin and parathyroid hormone are secreted by these glands.[AAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001188") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "DOI:10.1111/j.1469-7580.2005.00472.x Graham A, Okabe M, Quinlan R, The role of the endoderm in the development and evolution of the pharyngeal arches. J Anat (2005)") "The evolution of the tetrapods, and the shift from an aquatic to a terrestrial environment, was believed to have required new controls for regulating calcium homeostasis, and thus the evolution of parathyroid glands (...) both the tetrapod parathyroid and the gills of fish contribute to the regulation of extracellular calcium levels. It is therefore reasonable to suggest that the parathyroid gland evolved as a result of the transformation of the gills into the parathyroid glands of tetrapods and the transition from an aquatic to a terrestrial environment. This interpretation would also explain the positioning of the parathyroid gland within the pharynx in the tetrapod body. Were the parathyroid gland to have emerged de novo with the evolution of the tetrapods it could, as an endocrine organ, have been placed anywhere in the body and still exert its effect.[well established][VHOG]") AnnotationAssertion( "Parathyroid glands are found in all adult tetrapods, although they vary in their number, and in their exact position. Mammals typically have four parathyroids, while other groups typically have six. Fish do not possess parathyroid glands, although the ultimobranchial glands, which are found close to the oesophagus, may have a similar function and could even be homologous with the tetrapod parathyroids. Even these glands are absent in the most primitive vertebrates, the jawless fish, but as these species have no bone in their skeletons, only cartilage, it may be that they have less need to regulate calcium metabolism. The conserved homology of genes and calcium-sensing receptors in fish gills with those in the parathryroid glands of birds and mammals is recognized by evolutionary developmental biology as evolution-using genes and gene networks in novel ways to generate new structures with some similar functions and novel functions[WP]") AnnotationAssertion( "In humans and chick it emerges from pouches 3 and 4, but in mice it is exclusively generated by the third pouch") AnnotationAssertion(Annotation( ) "table 13.1 of Kardong is used to create the taxon-specific developmental relationships here, although some omissions are made for simplicity.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010545") AnnotationAssertion( "BTO:0000997") AnnotationAssertion( "CALOHA:TS-0745") AnnotationAssertion( "EFO:0000862") AnnotationAssertion( "EMAPA:32812") AnnotationAssertion( "EV:0100134") AnnotationAssertion( "FMA:13890") AnnotationAssertion( "GAID:452") AnnotationAssertion( "MA:0000128") AnnotationAssertion( "MAT:0000082") AnnotationAssertion( "MESH:D010280") AnnotationAssertion( "MIAA:0000082") AnnotationAssertion( "NCIT:C12765") AnnotationAssertion(Annotation( "ncithesaurus:Parathyroid_Gland") "UMLS:C0030518") AnnotationAssertion( "VHOG:0001188") AnnotationAssertion( "XAO:0000167") AnnotationAssertion( "parathyroid") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "XAO:0000167") "epithelial body") AnnotationAssertion( "parathyroid secreting cell") AnnotationAssertion( "UBERON:0001132") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "parathyroid gland") SubClassOf( ) SubClassOf( ) # Class: (cardiac muscle tissue) AnnotationAssertion(Annotation( "ZFA:0005280") "Muscle tissue composed of cardiac muscle cells, forming the muscles of the heart[ZFA,modified].") AnnotationAssertion( "check relationship with myocardium. part_of in MA - but we also have a more specific class 'cardiac muscle tissue of myocardium'. Check ncit") AnnotationAssertion( "UBERON:0007096") AnnotationAssertion( ) AnnotationAssertion( "AAO:0010245") AnnotationAssertion( "AEO:0000142") AnnotationAssertion( "BILA:0000134") AnnotationAssertion( "BTO:0000199") AnnotationAssertion( "CALOHA:TS-0440") AnnotationAssertion( "EHDAA2:0003142") AnnotationAssertion( "EMAPA:32688") AnnotationAssertion( "FMA:14068") AnnotationAssertion( "TAO:0005280") AnnotationAssertion( "ZFA:0005280") AnnotationAssertion( "galen:CardiacMuscle") AnnotationAssertion( "galen:CardiacMuscleTissue") AnnotationAssertion( "ncithesaurus:Heart_Muscle") AnnotationAssertion( "cardiac muscle") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "cardiac muscle muscle tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "cardiac muscle textus muscularis") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "heart muscle muscle tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "heart muscle textus muscularis") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "heart myocardium muscle tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "heart myocardium textus muscularis") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "muscle of heart muscle tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "muscle of heart textus muscularis") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "muscle tissue of cardiac muscle") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "muscle tissue of heart muscle") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "muscle tissue of heart myocardium") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "muscle tissue of muscle of heart") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "muscle tissue of myocardium") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "myocardium muscle tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "myocardium textus muscularis") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "textus muscularis of cardiac muscle") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "textus muscularis of heart muscle") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "textus muscularis of heart myocardium") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "textus muscularis of muscle of heart") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "textus muscularis of myocardium") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BILA:0000134") "cardiac musculature") AnnotationAssertion( "UBERON:0001133") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "cardiac muscle tissue") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "ZFA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses( ) # Class: (skeletal muscle tissue) AnnotationAssertion(Annotation( ) "Muscle tissue that consists primarily of skeletal muscle fibers.") AnnotationAssertion( "TODO - add skeletal muscle organ? See GO:0060538 skeletal muscle organ development. Todo - group FBbt:00005073 - somatic muscle.") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0005277") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "Muscle, composed of long cylindrical, multinucleated cells that attaches to the skeleton via tendons.[TAO]") AnnotationAssertion(Annotation( "FMA:14069") Annotation( "FMA") "Tissue which consists of skeletal muscle fibers surrounded by endomysium. Examples: Skeletal muscle tissue of biceps, Skeletal muscle tissue of diaphragm[FMA]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000319") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "PMID:10368962 Oota S, Saitou N, Phylogenetic relationship of muscle tissues deduced from superimposition of gene trees. Mol Biol Evol (1999)") "This result implies the following views in terms of evolutionary differentiation: (1) Arthropod striated muscle and vertebrate skeletal and cardiac muscles share a common ancestor. In other words, they did not evolve independently (...) (5) The divergence of vertebrate skeletal and cardiac muscles/vertebrate smooth muscle and nonmuscle is at least before that of vertebrates/arthropods. In other words, emergence of skeletal and cardiac musle type tissues preceded the vertebrate/arthropod divergence (ca. 700 MYA).[well established][VHOG]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "skeletal muscle") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:32716") AnnotationAssertion( "FMA:14069") AnnotationAssertion( "MA:0002439") AnnotationAssertion( "NCIT:C13050") AnnotationAssertion(Annotation( "ncithesaurus:Skeletal_Muscle_Tissue") "UMLS:C0242692") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0001103") "skeletal muscle system") AnnotationAssertion(Annotation( "BTO:0001103") "somatic muscle") AnnotationAssertion( "UBERON:0001134") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "skeletal muscle tissue") AnnotationAssertion( "Skeletal:muscle.jpg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (smooth muscle tissue) AnnotationAssertion(Annotation( ) Annotation( "GO:0006939") "Muscle tissue which is unstriated, composed primarily of smooth muscle fibers surrounded by a reticulum of collagen and elastic fibers. Smooth muscle differs from striated muscle in the much higher actin/myosin ratio, the absence of conspicuous sarcomeres and the ability to contract to a much smaller fraction of its resting length[GO].") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0005274") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "A non-striated muscle that is composed of spindle-shaped cells. Smooth muscle usually is organized into sheets that line cavitated organs.[TAO]") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0010244") Annotation( "AAO"^^xsd:string) Annotation( "AAO:CAM") "Involuntary muscle tissue consisting of uninucleate spindle-shaped fibers.[AAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001246") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "DOI:10.1002/jez.b.21416 Chiodin M, Achatz JG, Wanninger A, Martinez P, Molecular architecture of muscles in an acoel and its evolutionary implications. Journal of Experimental Zoology (2011)") "(...) the first bilateral animals possessed only smooth muscles with the molecular repertoire necessary to build a striated muscle. (...) it is more parsimonious to regard striated muscle cells as a sister cell type to the smooth muscle cells. In this scenario, striated and smooth muscles would have arisen in the stem lineage that led to the Nephrozoa (i.e. all Bilateria exclusive the acoelomorphs) (Hejnol et al., 2009), from an 'acoel-like' smooth muscle, by segregation and divergence of functions and through differential recruitment of additional genes[well established][VHOG]") AnnotationAssertion( "GO uses visceral and smooth interchangeably. However visceral can also be used in the sense of the viscera. Many fly annotations to smooth muscle terms. If we want to be inclusive of insects have to have a general definition of tissue that includes cells.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010244") AnnotationAssertion( "AEO:0000141") AnnotationAssertion( "BTO:0001260") AnnotationAssertion( "CALOHA:TS-0943") AnnotationAssertion( "EFO:0000889") AnnotationAssertion( "EHDAA2:0003141") AnnotationAssertion( "EMAPA:32717") AnnotationAssertion( "EV:0100378") AnnotationAssertion( "FBbt:00003525") AnnotationAssertion( "FMA:14070") AnnotationAssertion( "GAID:167") AnnotationAssertion( "MA:0000166") AnnotationAssertion( "MAT:0000303") AnnotationAssertion( "MESH:D009130") AnnotationAssertion( "MIAA:0000303") AnnotationAssertion( "NCIT:C12437") AnnotationAssertion( "OpenCyc:Mx4rvvSS3pwpEbGdrcN5Y29ycA") AnnotationAssertion( "TAO:0005274") AnnotationAssertion(Annotation( "ncithesaurus:Smooth_Muscle_Tissue") "UMLS:C1267092") AnnotationAssertion( "VHOG:0001246") AnnotationAssertion( "WBbt:0005781") AnnotationAssertion( "XAO:0000175") AnnotationAssertion( "ZFA:0005274") AnnotationAssertion( "galen:SmoothMuscle") AnnotationAssertion( "galen:SmoothMuscleTissue") AnnotationAssertion( "involuntary muscle") AnnotationAssertion( "non-striated muscle") AnnotationAssertion( "smooth muscle") AnnotationAssertion(Annotation( "FMA:14070") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "textus muscularis nonstriatus") AnnotationAssertion(Annotation( ) "visceral muscle") AnnotationAssertion(Annotation( ) "visceral muscle tissue") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "textus muscularis levis; textus muscularis nonstriatus") AnnotationAssertion( "UBERON:0001135") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "smooth muscle tissue") AnnotationAssertion( "Glatte:Muskelzellen.jpg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses( ) # Class: (mesothelium) AnnotationAssertion(Annotation( ) Annotation( "FMA:14074") "Simple squamous epithelium of mesodermal origin which lines serous membranes. Examples: mesothelium of pleura, mesothelium of peritoneum[FMA]. Wikipedia: The mesothelium is a membrane that forms the lining of several body cavities: the pleura (thoracal cavity), peritoneum (abdominal cavity including the mesentery) and pericardium (heart sac). Mesothelial tissue also surrounds the male internal reproductive organs (the tunica vaginalis testis) and covers the internal reproductive organs of women (the tunica serosa uteri).") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AEO:0000111") AnnotationAssertion( "BTO:0002422") AnnotationAssertion( "CALOHA:TS-1183") AnnotationAssertion( "EHDAA2_RETIRED:0003111") AnnotationAssertion( "EHDAA:2331") AnnotationAssertion( "EHDAA:2349") AnnotationAssertion( "EHDAA:295") AnnotationAssertion( "EHDAA:6073") AnnotationAssertion( "EHDAA:640") AnnotationAssertion( "EHDAA:646") AnnotationAssertion( "EMAPA:32856") AnnotationAssertion( "FMA:14074") AnnotationAssertion( "MA:0000565") AnnotationAssertion( "NCIT:C33105") AnnotationAssertion(Annotation( "ncithesaurus:Mesothelium") "UMLS:C0086610") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001136") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "mesothelium") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/2/25/Mesothelium_peritoneal_wash_high_mag.jpg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (dorsum) AnnotationAssertion(Annotation( ) Annotation( "BSPO:0000063") Annotation( "UBERONREF:0000006") "A major subdivision of an organism that is the entire part of the organism dorsal to a horizontal plane and bounded on one side by the same transverse plane. In vertebrares this includes the vertebral column..") AnnotationAssertion( "dorsal") AnnotationAssertion( "In humans, called the back, a large posterior area of the human body, rising from the top of the buttocks to the back of the neck and the shoulders. It is the surface opposite to the chest, its height being defined by the vertebral column (commonly referred to as the spine or backbone) and its breadth being supported by the ribcage and shoulders. The spinal canal runs through the spine and provides nerves to the rest of the body") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0001713") AnnotationAssertion( "CALOHA:TS-2223") AnnotationAssertion( "EFO:0001405") AnnotationAssertion( "FMA:14181") AnnotationAssertion( "GAID:30") AnnotationAssertion( "MESH:A01.176") AnnotationAssertion( "NCIT:C13062") AnnotationAssertion( "OpenCyc:Mx4rvVkEU5wpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Back") "UMLS:C0004600") AnnotationAssertion( "galen:Back") AnnotationAssertion(Annotation( "FMA:14181") "back") AnnotationAssertion(Annotation( "FMA:14181") "back of body proper") AnnotationAssertion( "dorsal part of organism") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001137") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "dorsum") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/e/ee/432px-Gray-back.PNG"^^xsd:anyURI) SubClassOf( ) # Class: (superior mesenteric vein) AnnotationAssertion(Annotation( ) "In anatomy, the superior mesenteric vein (SMV) is a blood vessel that drains blood from the small intestine. At its termination behind the neck of the pancreas, the SMV combines with the splenic vein to form the hepatic portal vein. The SMV lies to the right of the similarly named artery, the superior mesenteric artery, which originates from the abdominal aorta. [WP,unvetted].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0002783") AnnotationAssertion( "EHDAA2:0001951") AnnotationAssertion( "EHDAA:5414") AnnotationAssertion( "EMAPA:18643") AnnotationAssertion( "FMA:14332") AnnotationAssertion( "MA:0002179") AnnotationAssertion( "NCIT:C33687") AnnotationAssertion( "OpenCyc:Mx4rwFjmM5wpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Superior_Mesenteric_Vein") "UMLS:C0226742") AnnotationAssertion( "VHOG:0000552") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0002783") "upper mesenteric vein") AnnotationAssertion(Annotation( ) Annotation( ) "vena mesenterica superior") AnnotationAssertion( "UBERON:0001138") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "superior mesenteric vein") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/3/33/Gray591.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (common iliac vein) AnnotationAssertion(Annotation( ) Annotation( "MURDOCH:403") "A vein that drains the pelvis and lower limbs into the inferior vena cava.") AnnotationAssertion(Annotation( ) "In human anatomy, the common iliac veins are formed by the external iliac veins and internal iliac veins and together, in the abdomen at the level of the fifth lumbar vertebrae, form the inferior vena cava. They drain blood from the pelvis and lower limbs. Both common iliac veins are accompanied along their course by common iliac arteries.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:17874") AnnotationAssertion( "FMA:14333") AnnotationAssertion( "MA:0002143") AnnotationAssertion( "NCIT:C32359") AnnotationAssertion( "OpenCyc:Mx4rv92CGZwpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Common_Iliac_Vein") "UMLS:C0226758") AnnotationAssertion( "galen:CommonIliacVein") AnnotationAssertion( "common iliac venous tree") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "vena iliaca communis") AnnotationAssertion( "UBERON:0001139") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "common iliac vein") AnnotationAssertion( "Iliac:veins.gif"^^xsd:anyURI) SubClassOf(Annotation( "MA"^^xsd:string) ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA-abduced-lr"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (renal vein) AnnotationAssertion(Annotation( "ISBN:0-683-40008-8"^^xsd:string) Annotation( "MGI:csmith"^^xsd:string) Annotation( "MP:0011323") "Either of the pair of major vessels which arise from the renal hilus and return blood from the kidneys, suprarenal gland and the ureter to the inferior vena cava.") AnnotationAssertion(Annotation( ) "The renal veins are veins that drain the kidney. They connect the kidney to the inferior vena cava. It is usually singular to each kidney, except in the condition 'multiple renal veins'. It also divides into 2 divisions upon entering the kidney: the anterior branch which receives blood from the anterior portion of the kidney and, the posterior branch which receives blood from the posterior portion. Often, each renal vein will have a branch that receives blood from the ureter. [WP,unvetted][Wikipedia:Renal_vein].") AnnotationAssertion(Annotation( "EHDAA2"^^xsd:string) "in EHDAA2, the renal vein is part of the kidney") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0002681") AnnotationAssertion( "EHDAA2:0001602") AnnotationAssertion( "EHDAA:8722") AnnotationAssertion( "EMAPA:28376") AnnotationAssertion( "FMA:14334") AnnotationAssertion( "GAID:544") AnnotationAssertion( "MA:0002210") AnnotationAssertion( "MESH:D012082") AnnotationAssertion( "NCIT:C33462") AnnotationAssertion( "OpenCyc:Mx4rvdUXKJwpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Renal_Vein") "UMLS:C0035092") AnnotationAssertion( "galen:RenalVein") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "kidney vein") AnnotationAssertion( "renal venous tree") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "vein of kidney") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "venae renales") AnnotationAssertion( "UBERON:0001140") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "renal vein") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/7/76/Gray1122.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (right renal vein) AnnotationAssertion(Annotation( ) "A renal vein that drains the right kidney.") AnnotationAssertion(Annotation( "ncithesaurus:Right_Renal_Vein") "A vein that drains blood from the right kidney into the inferior vena cava[ncithesaurus].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37381") AnnotationAssertion( "FMA:14335") AnnotationAssertion( "MA:0002212") AnnotationAssertion( "NCIT:C52695") AnnotationAssertion( "OpenCyc:Mx8Ngh4rvgHsHZwpEbGdrcN5Y29ycB4rvdUXKJwpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Right_Renal_Vein") "UMLS:C0508000") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001141") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "right renal vein") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (left renal vein) AnnotationAssertion(Annotation( ) "A renal vein that drains the left kidney.") AnnotationAssertion(Annotation( "ncithesaurus:Left_Renal_Vein") "A vein that drains blood from the left kidney into the inferior vena cava[ncithesaurus].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37166") AnnotationAssertion( "FMA:14336") AnnotationAssertion( "MA:0002211") AnnotationAssertion( "NCIT:C52693") AnnotationAssertion( "OpenCyc:Mx8Ngh4rvgIFoJwpEbGdrcN5Y29ycB4rvdUXKJwpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Left_Renal_Vein") "UMLS:C0508001") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001142") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "left renal vein") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/7/76/Gray1122.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (hepatic vein) AnnotationAssertion(Annotation( ) Annotation( ) Annotation( "ZFA:0000670") "Vein that carries blood away from the liver[ZFA].") AnnotationAssertion( "todo - add developmental relationships for other taxa") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010216") AnnotationAssertion( "EMAPA:19221") AnnotationAssertion( "FMA:14337") AnnotationAssertion( "GAID:534") AnnotationAssertion( "MA:0003015") AnnotationAssertion( "MESH:D006503") AnnotationAssertion( "NCIT:C32736") AnnotationAssertion( "OpenCyc:Mx4rv5GivJwpEbGdrcN5Y29ycA") AnnotationAssertion( "TAO:0000670") AnnotationAssertion(Annotation( "ncithesaurus:Hepatic_Vein") "UMLS:C0019155") AnnotationAssertion( "XAO:0000387") AnnotationAssertion( "ZFA:0000670") AnnotationAssertion( "galen:HepaticVein") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "liver vein") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "vein of liver") AnnotationAssertion(Annotation( ) "vena hepatica") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "hepatic veins") AnnotationAssertion(Annotation( ) Annotation( ) "venae hepaticae") AnnotationAssertion( "UBERON:0001143") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "hepatic vein") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/6/61/Gray1121.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA-abduced-lr"^^xsd:string) ObjectSomeValuesFrom( )) DisjointClasses( ) # Class: (testicular vein) AnnotationAssertion(Annotation( ) Annotation( ) Annotation( ) "A vein that carries deoxygenated blood from a single male gonad. It is the male equivalent of the ovarian vein, and is the venous counterpart of the testicular artery. It is a paired vein, with one supplying each testis.") AnnotationAssertion( "TODO - check testicular vs spermatic vein (MA:0002218)") AnnotationAssertion( "In humans, the right testicular vein generally joins the inferior vena cava; the left testicular vein, unlike the right, often joins the left renal vein instead of the inferior vena cava. The veins emerge from the back of the testis, and receive tributaries from the epididymis; they unite and form a convoluted plexus, called the pampiniform plexus, which constitutes the greater mass of the spermatic cord; the vessels composing this plexus are very numerous, and ascend along the cord, in front of the ductus deferens. Below the subcutaneous inguinal ring, they unite to form three or four veins, which pass along the inguinal canal, and, entering the abdomen through the abdominal inguinal ring, coalesce to form two veins, which ascend on the Psoas major, behind the peritoneum, lying one on either side of the internal spermatic artery. These unite to form a single vein, which opens, on the right side, into the inferior vena cava (at an acute angle), on the left side into the left renal vein (at a right angle). The spermatic veins are provided with valves. The left spermatic vein passes behind the iliac colon and is thus exposed to pressure from the contents of that part of the bowel") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0002678") AnnotationAssertion( "EMAPA:18647") AnnotationAssertion( "FMA:14344") AnnotationAssertion( "MA:0002218") AnnotationAssertion( "MA:0002234") AnnotationAssertion( "NCIT:C53050") AnnotationAssertion( "OpenCyc:Mx4rv1WIHpwpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Spermatic_Vein") "UMLS:C0226718") AnnotationAssertion(Annotation( ) "male gonadal vein") AnnotationAssertion(Annotation( ) "spermatic vein") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "testicle vein") AnnotationAssertion(Annotation( ) "testicular venous tree") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "vein of testicle") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0002678") "vena tesicularis") AnnotationAssertion(Annotation( ) Annotation( ) "vena testicularis dextra") AnnotationAssertion(Annotation( ) Annotation( ) "vena testicularis sinistra") AnnotationAssertion(Annotation( ) Annotation( ) "venae spermaticae") AnnotationAssertion( "UBERON:0001144") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "testicular vein") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/1/1b/Gray590.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (ovarian vein) AnnotationAssertion(Annotation( ) "A vein that carries deoxygenated blood from its corresponding ovary to inferior vena cava or one of its tributaries.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:18644") AnnotationAssertion( "FMA:14346") AnnotationAssertion( "MA:0002186") AnnotationAssertion( "NCIT:C53058") AnnotationAssertion( "OpenCyc:Mx4rvrST5ZwpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Ovarian_Vein") "UMLS:C0226720") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "female reproductive system gonad vein") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "female reproductive system gonada vein") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "gonad of female reproductive system vein") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "gonada of female reproductive system vein") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "ovary vein") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "vein of female reproductive system gonad") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "vein of female reproductive system gonada") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "vein of gonad of female reproductive system") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "vein of gonada of female reproductive system") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "vein of ovary") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "vena ovarica dextra") AnnotationAssertion(Annotation( ) Annotation( ) "vena ovarica sinistra") AnnotationAssertion( "UBERON:0001145") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "ovarian vein") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/c/cf/Ovarschaf.jpg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (suprarenal vein) AnnotationAssertion(Annotation( ) Annotation( ) "A vein that drains the adrenal gland.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0001966") AnnotationAssertion( "EHDAA:8731") AnnotationAssertion( "FMA:14348") AnnotationAssertion( "MA:0002081") AnnotationAssertion( "MA:0002229") AnnotationAssertion( "NCIT:C53129") AnnotationAssertion(Annotation( "ncithesaurus:Suprarenal_Vein") "UMLS:C0226717") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "MA:0002081") "adrenal vein") AnnotationAssertion( "UBERON:0001146") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "suprarenal vein") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/7/76/Gray1122.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (median nerve) AnnotationAssertion(Annotation( ) "A nerve of the arm that originates from the brachial plexus and is formed from parts of the medial and lateral cords of the brachial plexus, and continues down the arm to enter the forearm with the brachial artery. It originates from the brachial plexus with roots from C5, C6, C7, C8 & T1.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0001086") AnnotationAssertion( "EHDAA:5648") AnnotationAssertion( "EMAPA:17277") AnnotationAssertion( "FMA:14385") AnnotationAssertion( "GAID:843") AnnotationAssertion( "MA:0001168") AnnotationAssertion( "MESH:D008475") AnnotationAssertion( "NCIT:C52815") AnnotationAssertion( "OpenCyc:Mx4rwF4HF5wpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Median_Nerve") "UMLS:C0025058") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "nervus medianus") AnnotationAssertion( "UBERON:0001148") AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "The median nerve is the only nerve that passes through the carpal tunnel, where it may be compressed to cause carpal tunnel syndrome. [WP]") AnnotationAssertion(rdfs:label "median nerve") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/a/a7/Nerves_of_the_left_upper_extremity.gif"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (bare area of liver) AnnotationAssertion(Annotation( ) "A large triangular surface of the liver devoid of peritoneal covering.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:17945") AnnotationAssertion( "FMA:14480") AnnotationAssertion( "MA:0000359") AnnotationAssertion( "area nuda (hepar)") AnnotationAssertion( "area nuda hepatis") AnnotationAssertion( "liver bare area") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "area nuda") AnnotationAssertion(Annotation( ) "bare area") AnnotationAssertion(Annotation( "EMAPA:17945") "hepatic bare area") AnnotationAssertion( "UBERON:0001149") AnnotationAssertion(rdfs:label "bare area of liver") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (body of pancreas) AnnotationAssertion(Annotation( ) "The body of the pancreas is a subsection of the pancreas organ in the human body. It is somewhat prismatic in shape, and has three surfaces: anterior, posterior, and inferior. It is at the same level as the transpyloric plane. [WP,unvetted].") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000451") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "DOI:10.1016/j.crvi.2007.03.006 Madsen OD, Pancreas phylogeny and ontogeny in relation to a 'pancreatic stem cell'. Comptes Rendus Biologies (2007)") "Hagfish and lampreys may have one or more endocrine buds - and later the vertebrate pancreas develop as independent ventral and dorsal buds that eventually fuse to become one organ.[well established][VHOG]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0001368") AnnotationAssertion( "EHDAA:9178") AnnotationAssertion( "EMAPA:17504") AnnotationAssertion( "FMA:14518") AnnotationAssertion( "MA:0000121") AnnotationAssertion( "NCIT:C12270") AnnotationAssertion(Annotation( "ncithesaurus:Body_of_the_Pancreas") "UMLS:C0227582") AnnotationAssertion( "VHOG:0000451") AnnotationAssertion( "pancreas body") AnnotationAssertion( "pancreatic body") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "corpus pancreatis") AnnotationAssertion( "pancreas corpus") AnnotationAssertion( "UBERON:0001150") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "body of pancreas") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/f/fe/Illu_pancreas_duodenum.jpg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (tail of pancreas) AnnotationAssertion(Annotation( ) "The tail of the pancreas, located anatomically left near the hilum of the spleen, is not simply an anatomical distinction. The tail is the only part of the pancreas which contains Pancreatic Polypeptide (PP) cells, which are responsible for secreting pancreatic polypeptide to coordinate exocrine and islet enzyme release. PP cells are found in the tail's periphery. Beta cells and delta cells are found in the central part of the tail as with the rest of the pancreas. The cells described above are located exclusively in the islet cells; their secretions reach exocrine portions of the pancreas via the capillary network surrounding the islet cell populations. [WP,unvetted].") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000452") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "DOI:10.1016/j.crvi.2007.03.006 Madsen OD, Pancreas phylogeny and ontogeny in relation to a 'pancreatic stem cell'. Comptes Rendus Biologies (2007)") "Hagfish and lampreys may have one or more endocrine buds - and later the vertebrate pancreas develop as independent ventral and dorsal buds that eventually fuse to become one organ.[well established][VHOG]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0001390") AnnotationAssertion( "EMAPA:17511") AnnotationAssertion( "FMA:14519") AnnotationAssertion( "MA:0000123") AnnotationAssertion( "NCIT:C12271") AnnotationAssertion(Annotation( "ncithesaurus:Tail_of_the_Pancreas") "UMLS:C0227590") AnnotationAssertion( "VHOG:0000452") AnnotationAssertion(Annotation( "FMA:14519") "left extremity of pancreas") AnnotationAssertion( "pancreas tail") AnnotationAssertion(Annotation( "FMA:14519") "pancreatic tail") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "cauda pancreatis") AnnotationAssertion( "UBERON:0001151") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "tail of pancreas") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/f/fe/Illu_pancreas_duodenum.jpg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (cystic duct) AnnotationAssertion(Annotation( "ISBN:0-683-40008-8"^^xsd:string) Annotation( "MP:0009493") "The tubular structure that conducts gall bladder contents from the gall bladder to the common bile duct.") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0005166") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:Curator") "Duct that connects the gall bladder and the common bile duct.[TAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000213") Annotation( "VHOG"^^xsd:string) Annotation( ) "The duct of the gallbladder which joins the common hepatic duct, thus forming the common biliary duct. [Dorian_AF, Elsevier's_encyclopaedic_dictionary_of_medicine, Part_B:_Anatomy_(1988)_Amsterdam_etc.:_Elsevier][VHOG]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0000333") AnnotationAssertion( "EHDAA:3045") AnnotationAssertion( "EMAPA:16841") AnnotationAssertion( "FMA:14539") AnnotationAssertion( "GAID:290") AnnotationAssertion( "MA:0000355") AnnotationAssertion( "MESH:A03.159.183.419") AnnotationAssertion( "NCIT:C32421") AnnotationAssertion( "OpenCyc:Mx4rveBeC5wpEbGdrcN5Y29ycA") AnnotationAssertion( "TAO:0005166") AnnotationAssertion(Annotation( "ncithesaurus:Cystic_Duct") "UMLS:C0010672") AnnotationAssertion( "VHOG:0000213") AnnotationAssertion( "ZFA:0005166") AnnotationAssertion( "galen:CysticDuct") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "ductus cysticus") AnnotationAssertion( "UBERON:0001152") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "cystic duct") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/4/48/Illu_liver_gallbladder.jpg"^^xsd:anyURI) AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/5/5d/Digestive_system_showing_bile_duct.png"^^xsd:anyURI) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses( ) # Class: (caecum) AnnotationAssertion(Annotation( ) "A pouch in the digestive tract that connects the ileum with the ascending colon of the large intestine. It is separated from the ileum by the ileocecal valve, and is the beginning of the large intestine. It is also separated from the colon by the cecocolic junction.") AnnotationAssertion(Annotation( "Wikipedia"^^xsd:string) ) AnnotationAssertion( "caecal") AnnotationAssertion(Annotation( "WP"^^xsd:string) "A cecum is present in most amniote species, and also in lungfish, but not in any living species of amphibian. In reptiles, it is usually a single median structure, arising from the dorsal side of the large intestine. Birds typically have two paired ceca, as, unlike other mammals, do hyraxes. Most mammalian herbivores have a relatively large cecum, hosting a large number of bacteria, which aid in the enzymatic breakdown of plant materials such as cellulose; in many species, it is considerably wider than the colon. In contrast, obligatory carnivores, whose diets contain little or no plant material, have a reduced cecum, which is often partially or wholly replaced by the vermiform appendix. Many fish have a number of small outpocketings, called pyloric ceca, along their intestine; despite the name they are not homologous with the cecum of amniotes, and their purpose is to increase the overall area of the digestive epithelium.[2] Some invertebrates, such as squid,[3] may also have structures with the same name, but these have no relationship with those of vertebrates.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0000166") AnnotationAssertion( "CALOHA:TS-0122") AnnotationAssertion( "EFO:0000850") AnnotationAssertion( "EHDAA2:0000206") AnnotationAssertion( "EHDAA:3913") AnnotationAssertion( "EMAPA:35197") AnnotationAssertion( "EV:0100397") AnnotationAssertion( "FMA:14541") AnnotationAssertion( "GAID:307") AnnotationAssertion( "MA:0000334") AnnotationAssertion( "MESH:A03.492.411.495.209") AnnotationAssertion( "MIAA:0000288") AnnotationAssertion( "NCIT:C12381") AnnotationAssertion( "OpenCyc:Mx4rve6u4JwpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Cecum") "UMLS:C0007531") AnnotationAssertion( "VHOG:0001559") AnnotationAssertion( "galen:Cecum") AnnotationAssertion(Annotation( "VHOG:0001559") "caecum") AnnotationAssertion(Annotation( "FMA:14541") "cecum") AnnotationAssertion( "intestinum crassum caecum") AnnotationAssertion(Annotation( "NCBITaxon:8782"^^xsd:string) Annotation( ) "caeca") AnnotationAssertion(Annotation( "NCBITaxon:8782"^^xsd:string) Annotation( ) "ceca") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0000166") "blind intestine") AnnotationAssertion(Annotation( "BTO:0000166") "blindgut") AnnotationAssertion(Annotation( "BTO:0000166") "intestinum caecum") AnnotationAssertion(Annotation( "BTO:0000166") "intestinum crassum cecum") AnnotationAssertion( "UBERON:0001153") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "Taxon notes: in some herbivorous lizards, a cecum is present between small and large intestines[Kardong]") AnnotationAssertion(rdfs:label "caecum") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/8/82/Stomach_colon_rectum_diagram.svg"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "Wikipedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "Wikipedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (vermiform appendix) AnnotationAssertion(Annotation( ) Annotation( ) "A blind-ended tube connected to the cecum, from which it develops embryologically[WP].") AnnotationAssertion( "Mammalia") AnnotationAssertion(Annotation( "FMA:14542") "Organ with organ cavity which is continuous proximally with the cecum and distally terminates in the tip of the appendix. Examples: There is only one appendix[FMA:14542].") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001306") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "DOI:10.1111/j.1420-9101.2009.01809.x Smith HF, Fisher RE, Everett ML, Thomas AD, Randal Bollinger R, Parker W, Comparative anatomy and phylogenetic distribution of the mammalian cecal appendix. Journal of Evolutionary Biology (2009)") "A comparative anatomical approach reveals three apparent morphotypes of the cecal appendix, as well as appendix-like structures in some species that lack a true cecal appendix. Cladistic analyses indicate that the appendix has evolved independently at least twice (at least once in diprotodont marsupials and at least once in Euarchontoglires), shows a highly significant (P < 0.0001) phylogenetic signal in its distribution, and has been maintained in mammalian evolution for 80 million years or longer.[well established][VHOG]") AnnotationAssertion( "appendiceal") AnnotationAssertion( "vermix") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0000084") AnnotationAssertion( "CALOHA:TS-1267") AnnotationAssertion( "EFO:0000849") AnnotationAssertion( "EHDAA2:0000588") AnnotationAssertion( "EMAPA:35140") AnnotationAssertion( "EV:0100076") AnnotationAssertion( "EV:0100080") AnnotationAssertion( "FMA:14542") AnnotationAssertion( "GAID:308") AnnotationAssertion( "MA:0001540") AnnotationAssertion( "MAT:0000287") AnnotationAssertion( "MESH:A03.492.411.495.209.290") AnnotationAssertion( "MIAA:0000287") AnnotationAssertion( "NCIT:C12380") AnnotationAssertion( "OpenCyc:Mx4rvVjGgJwpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Vermiform_Appendix") "UMLS:C0003617") AnnotationAssertion( "VHOG:0001306") AnnotationAssertion( "galen:AppendixVermiformis") AnnotationAssertion( "appendix") AnnotationAssertion(Annotation( "FMA:14542") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "appendix vermiformis") AnnotationAssertion( "caecal appendix") AnnotationAssertion( "cecal appendix") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "EMAPA:35140") "apex of caecum") AnnotationAssertion(Annotation( "VHOG:0001306") "apex of cecum") AnnotationAssertion(Annotation( ) Annotation( ) "appendix vermiformis") AnnotationAssertion( "UBERON:0001154") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "vermiform appendix") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/a/ad/Gray536.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "Wikipedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (colon) AnnotationAssertion(Annotation( ) Annotation( ) Annotation( ) Annotation( "ZFIN:curator"^^xsd:string) "A portion of the large intestine before it becomes the rectum. In mammals, the colon is the most part of the large intestine, excluding the vermiform appendix, the rectum and the anal canal.") AnnotationAssertion(Annotation( ) "Some references do not consider the caecum to be part of the colon.") AnnotationAssertion( "TODO - abstract this such that it legitimately covers all vertebrates") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0010400") Annotation( "AAO"^^xsd:string) Annotation( "UBERON:0001155") "The last portion of the digestive system, it extracts water and salt from solid wastes before they are eliminated from the body.[AAO]") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0000706") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "The posterior intestine has short longitudinally arranged epithelial folds which are similar to the colon of higher vertebrates. Wallace et al, 2005.[TAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000648") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0521617147 Stevens CE and Hume ID, Comparative physiology of the vertebrate digestive system (2004) p.11") "Although all vertebrates have a digestive tract and accessory glands, various parts of this system are not necessarily homologous, analogous, or even present in all species. Therefore, broad comparisons can be best made under the listings of headgut, foregut, midgut, pancreas and biliary system, hindgut.[uncertain][VHOG]") AnnotationAssertion( "colonic") AnnotationAssertion( "In mammals, the colon consists of four sections: the ascending colon, the transverse colon, the descending colon, and the sigmoid colon[WP]") AnnotationAssertion( "In zebrafish, the posterior intestine has short longitudinally arranged epithelial folds which are similar to the colon of higher vertebrates[ZFIN]") AnnotationAssertion( "it extracts water and salt from solid wastes before they are eliminated from the body[WP]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010400") AnnotationAssertion( "BTO:0000269") AnnotationAssertion( "CALOHA:TS-0158") AnnotationAssertion( "EFO:0000361") AnnotationAssertion( "EMAPA:18939") AnnotationAssertion( "EV:0100079") AnnotationAssertion( "FMA:14543") AnnotationAssertion( "GAID:309") AnnotationAssertion( "MA:0000335") AnnotationAssertion( "MAP:0000001") AnnotationAssertion( "MAT:0000526") AnnotationAssertion( "MESH:A03.492.411.495.356") AnnotationAssertion( "NCIT:C12382") AnnotationAssertion( "OpenCyc:Mx4rvgLEM5wpEbGdrcN5Y29ycA") AnnotationAssertion( "TAO:0000706") AnnotationAssertion(Annotation( "ncithesaurus:Colon") "UMLS:C0009368") AnnotationAssertion( "VHOG:0000648") AnnotationAssertion( "XAO:0000243") AnnotationAssertion( "ZFA:0000706") AnnotationAssertion( "galen:Colon") AnnotationAssertion( "large bowel") AnnotationAssertion( "posterior intestine") AnnotationAssertion( "uberon") AnnotationAssertion( "hindgut") AnnotationAssertion( "UBERON:0001155") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "colon") SubClassOf(Annotation( "3") Annotation( "cjm"^^xsd:string) ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (ascending colon) AnnotationAssertion(Annotation( ) Annotation( "FMA:14545") "Section of colon which is distal to the cecum and proximal to the transversecolon.[FMA,modified].") AnnotationAssertion(Annotation( "MA"^^xsd:string) "in MA, this is a subclass of colon") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0000270") AnnotationAssertion( "CALOHA:TS-0057") AnnotationAssertion( "EFO:0000843") AnnotationAssertion( "EMAPA:35151") AnnotationAssertion( "FMA:14545") AnnotationAssertion( "MA:0001541") AnnotationAssertion( "MAT:0000311") AnnotationAssertion( "MIAA:0000311") AnnotationAssertion( "NCIT:C12265") AnnotationAssertion( "OpenCyc:Mx4rv3H0FZwpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Ascending_Colon") "UMLS:C0227375") AnnotationAssertion( "galen:AscendingColon") AnnotationAssertion(Annotation( ) Annotation( ) "colon ascendens") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "spiral colon") AnnotationAssertion( "UBERON:0001156") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "ascending colon") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/3/3b/Dickdarm-Schema.svg"^^xsd:anyURI) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "Wikipedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (transverse colon) AnnotationAssertion(Annotation( ) Annotation( "BTO:0000272") "The proximal-distal subdivision of colon that runs transversely across the upper part of the abdomen, from the right to the left colic flexure. Continuous with the descending colon[BTO,modified].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0000272") AnnotationAssertion( "CALOHA:TS-2052") AnnotationAssertion( "EFO:0000844") AnnotationAssertion( "EMAPA:35880") AnnotationAssertion( "FMA:14546") AnnotationAssertion( "MA:0001543") AnnotationAssertion( "MAT:0000312") AnnotationAssertion( "MIAA:0000312") AnnotationAssertion( "NCIT:C12385") AnnotationAssertion( "OpenCyc:Mx4rvg7qyJwpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Transverse_Colon") "UMLS:C0227386") AnnotationAssertion( "galen:TransverseColon") AnnotationAssertion(Annotation( ) Annotation( ) "colon transversum") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001157") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "transverse colon") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/3/3b/Dickdarm-Schema.svg"^^xsd:anyURI) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "Wikipedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (descending colon) AnnotationAssertion(Annotation( "BTO:0000641") "The portion of the colon between the left colic flexure and the sigmoid colon at the pelvic brim; the portion of the descending colon lying in the left iliac fossa is sometimes called the iliac colon.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0000641") AnnotationAssertion( "CALOHA:TS-2010") AnnotationAssertion( "EFO:0000845") AnnotationAssertion( "EMAPA:35285") AnnotationAssertion( "FMA:14547") AnnotationAssertion( "MA:0001542") AnnotationAssertion( "MAT:0000313") AnnotationAssertion( "MIAA:0000313") AnnotationAssertion( "NCIT:C12268") AnnotationAssertion( "OpenCyc:Mx4rwHsNhpwpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Descending_Colon") "UMLS:C0227389") AnnotationAssertion( "galen:DescendingColon") AnnotationAssertion(Annotation( ) Annotation( ) "colon descendens") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001158") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "descending colon") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/c/ca/Gray1223.png"^^xsd:anyURI) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "Wikipedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (sigmoid colon) AnnotationAssertion(Annotation( ) "The part of the large intestine that is closest to the rectum and anus. It forms a loop that averages about 40 cm. in length, and normally lies within the pelvis, but on account of its freedom of movement it is liable to be displaced into the abdominal cavity.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0000645") AnnotationAssertion( "CALOHA:TS-2044") AnnotationAssertion( "EFO:0000846") AnnotationAssertion( "EMAPA:36391") AnnotationAssertion( "FMA:14548") AnnotationAssertion( "MAT:0000314") AnnotationAssertion( "MESH:A03.492.411.495.356.668") AnnotationAssertion( "MIAA:0000314") AnnotationAssertion( "NCIT:C12384") AnnotationAssertion( "NCIT:C33550") AnnotationAssertion( "OpenCyc:Mx4rwHX_-5wpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Sigmoid_Colon") "UMLS:C0227391") AnnotationAssertion(Annotation( "ncithesaurus:Sigmoid_Flexure") "UMLS:C0682612") AnnotationAssertion( "galen:SigmoidColon") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "colon sigmoideum") AnnotationAssertion( "pelvic colon") AnnotationAssertion( "sigmoid colon") AnnotationAssertion( "sigmoid flexure") AnnotationAssertion( "UBERON:0001159") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "sigmoid colon") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/3/3b/Dickdarm-Schema.svg"^^xsd:anyURI) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "Wikipedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (fundus of stomach) AnnotationAssertion(Annotation( ) Annotation( "GO:0014825") Annotation( "ISBN:0073040584"^^xsd:string) "The fundus is the portion of the stomach that lies above the cardiac notch, and contains the fundic glands[GO, Kardong].") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000421") Annotation( "VHOG"^^xsd:string) Annotation( ) "The greater curvature of the stomach. [Dorian_AF, Elsevier's_encyclopaedic_dictionary_of_medicine, Part_B:_Anatomy_(1988)_Amsterdam_etc.:_Elsevier][VHOG]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000421") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0521617147 Stevens CE and Hume ID, Comparative physiology of the vertebrate digestive system (2004) p.11") "Although all vertebrates have a digestive tract and accessory glands, various parts of this system are not necessarily homologous, analogous, or even present in all species. Therefore, broad comparisons can be best made under the listings of headgut, foregut, midgut, pancreas and biliary system, hindgut.[uncertain][VHOG]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0000502") AnnotationAssertion( "EFO:0002554") AnnotationAssertion( "EHDAA2:0001919") AnnotationAssertion( "EHDAA:4844") AnnotationAssertion( "EMAPA:17886") AnnotationAssertion( "FMA:14559") AnnotationAssertion( "GAID:320") AnnotationAssertion( "MA:0001612") AnnotationAssertion( "MESH:A03.492.766.419") AnnotationAssertion( "NCIT:C12257") AnnotationAssertion(Annotation( "ncithesaurus:Fundus_of_the_Stomach") "UMLS:C0017129") AnnotationAssertion( "VHOG:0000421") AnnotationAssertion( "galen:GastricFundus") AnnotationAssertion( "fundus gastricus (ventricularis)") AnnotationAssertion( "gastric fundus") AnnotationAssertion( "stomach fundus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0000502") "fundus gastricus") AnnotationAssertion(Annotation( "BTO:0000502") "fundus gastricus ventricularis") AnnotationAssertion(Annotation( "BTO:0000502") "fundus ventricularis") AnnotationAssertion(Annotation( "BTO:0000502") "fundus ventriculi") AnnotationAssertion( "UBERON:0001160") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "fundus of stomach") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/3/31/Gray1046.svg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (body of stomach) AnnotationAssertion(Annotation( ) Annotation( "GO:0014845") "The body of stomach is the part of the stomach that lies between the fundus above and the pyloric antrum below; its boundaries are poorly defined[GO].") AnnotationAssertion( "we include this as zone of stomach even though it is not distinguished by gland type") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0000505") AnnotationAssertion( "EMAPA:35810") AnnotationAssertion( "FMA:14560") AnnotationAssertion( "MA:0002559") AnnotationAssertion( "NCIT:C12258") AnnotationAssertion(Annotation( "ncithesaurus:Body_of_Stomach") "UMLS:C0227230") AnnotationAssertion( "galen:GastricCorpus") AnnotationAssertion( "corpus gastricum (ventriculare)") AnnotationAssertion( "gastric body") AnnotationAssertion( "stomach body") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "corpus gastricum") AnnotationAssertion(Annotation( "BTO:0000505") "corpus gastricum") AnnotationAssertion(Annotation( "BTO:0000505") "corpus ventriculare") AnnotationAssertion(Annotation( "BTO:0000505") "corpus ventriculi") AnnotationAssertion( "gastric corpus") AnnotationAssertion( "UBERON:0001161") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "body of stomach") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/3/31/Gray1046.svg"^^xsd:anyURI) SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (cardia of stomach) AnnotationAssertion(Annotation( ) Annotation( "BTO:0000198") "The part of the stomach attached to the esophagus. The cardia begins immediately distal to the z-line of the gastroeosphageal junction, where the squamous epithelium of the esophagus gives way to the columnar epithelium of the gastrointestinal tract[WP].") AnnotationAssertion( "There were previously conflicting statements in the academic anatomy community[10][11][12] over whether the cardia is part of the stomach, part of the esophagus or a distinct entity. Modern surgical and medical textbooks have agreed that 'The gastric cardia is now clearly considered to be part of the stomach'[13][14]. Classical anatomy textbooks, and some other resources[15], describe the cardia as the first of 4 regions of the stomach. This makes sense histologically because the mucosa of the cardia is the same as that of the stomach[WP]") AnnotationAssertion( "We follow Kardong in defining stomach regions by glands.") AnnotationAssertion( "UBERON:0004712") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0000198") AnnotationAssertion( "EMAPA:35811") AnnotationAssertion( "FMA:14561") AnnotationAssertion( "GAID:319") AnnotationAssertion( "MA:0001609") AnnotationAssertion( "MESH:A03.492.766.163") AnnotationAssertion( "NCIT:C12256") AnnotationAssertion(Annotation( "ncithesaurus:Cardia") "UMLS:C0007144") AnnotationAssertion( "cardial part of stomach") AnnotationAssertion( "gastric cardia") AnnotationAssertion( "pars cardiaca (gaster)") AnnotationAssertion(Annotation( "FMA:14561") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "pars cardiaca gastricae") AnnotationAssertion(Annotation( "MA:0001609") "stomach cardiac region") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "antrum cardiacum") AnnotationAssertion(Annotation( ) Annotation( ) "antrum cardiacum") AnnotationAssertion( "cardiac antrum") AnnotationAssertion(Annotation( ) "cardiac orifice") AnnotationAssertion(Annotation( ) "cardiac region") AnnotationAssertion(Annotation( ) "cardial orifice") AnnotationAssertion( "UBERON:0001162") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "cardia of stomach") AnnotationAssertion( "Illu:stomach.jpg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lesser curvature of stomach) AnnotationAssertion(Annotation( ) "The lesser curvature of the stomach, extending between the cardiac and pyloric orifices, forms the right or posterior border of the stomach. It descends as a continuation of the right margin of the esophagus in front of the fibers of the right crus of the diaphragm, and then, turning to the right, it crosses the first lumbar vertebra and ends at the pylorus. Nearer its pyloric than its cardiac end is a well-marked notch, the incisura angularis, which varies somewhat in position with the state of distension of the viscus; it serves to separate the stomach into a right and a left portion. The lesser curvature gives attachment to the two layers of the hepatogastric ligament, and between these two layers are the left gastric artery and the right gastric branch of the hepatic artery. [WP,unvetted].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37754") AnnotationAssertion( "FMA:14572") AnnotationAssertion( "MA:0001616") AnnotationAssertion( "NCIT:C12261") AnnotationAssertion(Annotation( "ncithesaurus:Lesser_Curvature") "UMLS:C0227221") AnnotationAssertion( "galen:LesserCurvatureOfStomach") AnnotationAssertion( "stomach lesser curvature") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001163") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "lesser curvature of stomach") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/3/31/Gray1046.svg"^^xsd:anyURI) SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (greater curvature of stomach) AnnotationAssertion(Annotation( ) "The greater curvature of the stomach is directed mainly forward, and is four or five times as long as the lesser curvature. [WP,unvetted].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37753") AnnotationAssertion( "FMA:14574") AnnotationAssertion( "MA:0001615") AnnotationAssertion( "NCIT:C12262") AnnotationAssertion(Annotation( "ncithesaurus:Greater_Curvature") "UMLS:C0227223") AnnotationAssertion( "galen:GreaterCurvatureOfStomach") AnnotationAssertion( "stomach greater curvature") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001164") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "greater curvature of stomach") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/3/31/Gray1046.svg"^^xsd:anyURI) SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (pyloric antrum) AnnotationAssertion(Annotation( "ISBN:0-683-40008-8"^^xsd:string) Annotation( "MP:0010790") "The area at the bottom of the stomach on the caudal side of the pyloric canal that contains gastrin-producing G cells, which stimulate acid production, and the luminal pH-sensitive population of somatostatin-producing D cells.") AnnotationAssertion( "antrum") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0001732") AnnotationAssertion( "EFO:0002555") AnnotationAssertion( "EMAPA:17891") AnnotationAssertion( "FMA:14579") AnnotationAssertion( "GAID:332") AnnotationAssertion( "MA:0001624") AnnotationAssertion( "MESH:A03.492.766.716") AnnotationAssertion( "NCIT:C12259") AnnotationAssertion(Annotation( "ncithesaurus:Antrum_Pylori") "UMLS:C0034193") AnnotationAssertion( "galen:PyloricAntrum") AnnotationAssertion( "antrum of stomach") AnnotationAssertion( "stomach pyloric antrum") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0001732") "antrum of Willis") AnnotationAssertion(Annotation( "BTO:0001732") "antrum pylori") AnnotationAssertion(Annotation( ) Annotation( ) "antrum pyloricum") AnnotationAssertion(Annotation( "BTO:0001732") "antrum pyloricum") AnnotationAssertion(Annotation( "BTO:0001732") "gastric antrum") AnnotationAssertion( "stomach antrum") AnnotationAssertion( "UBERON:0001165") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "pyloric antrum") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/3/31/Gray1046.svg"^^xsd:anyURI) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf(Annotation( "Wikipedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pylorus) AnnotationAssertion(Annotation( "MGI:csmith"^^xsd:string) Annotation( "MP:0010785") "The stomach tissue region surrounding and controlling the distal outlet of the stomach, which opens into the duodenum.") AnnotationAssertion( "We follow Kardong in defining stomach regions by glands") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000420") Annotation( "VHOG"^^xsd:string) Annotation( ) "The orifice which allows the passage from the stomach into the intestine. [Dorian_AF, Elsevier's_encyclopaedic_dictionary_of_medicine, Part_B:_Anatomy_(1988)_Amsterdam_etc.:_Elsevier][VHOG]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000420") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0521617147 Stevens CE and Hume ID, Comparative physiology of the vertebrate digestive system (2004) p.11") "Although all vertebrates have a digestive tract and accessory glands, various parts of this system are not necessarily homologous, analogous, or even present in all species. Therefore, broad comparisons can be best made under the listings of headgut, foregut, midgut, pancreas and biliary system, hindgut.[uncertain][VHOG]") AnnotationAssertion( "pyloric") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0001146") AnnotationAssertion( "EHDAA2:0001580") AnnotationAssertion( "EHDAA:4860") AnnotationAssertion( "EMAPA:17631") AnnotationAssertion( "FMA:14581") AnnotationAssertion( "GAID:333") AnnotationAssertion( "MA:0002560") AnnotationAssertion( "MESH:A03.492.766.799") AnnotationAssertion( "NCIT:C12260") AnnotationAssertion(Annotation( "ncithesaurus:Pylorus") "UMLS:C0034196") AnnotationAssertion( "VHOG:0000420") AnnotationAssertion( "galen:Pylorus") AnnotationAssertion(Annotation( ) "pars pylorica") AnnotationAssertion(Annotation( "FMA:14581") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "pars pylorica gastricae") AnnotationAssertion( "pyloric part of stomach") AnnotationAssertion( "pyloric region") AnnotationAssertion(Annotation( "EHDAA2:0001580") "stomach pyloric region") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "valvula pylori") AnnotationAssertion( "UBERON:0001166") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "pylorus") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/3/31/Gray1046.svg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (wall of stomach) AnnotationAssertion(Annotation( "MGI:csmith"^^xsd:string) Annotation( "MP:0010783") "The layered structure that makes up the stomach, typiclly consists of a serous coat, a muscular coat, a mucous membrane, and other tissue layers in between.") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:35826") AnnotationAssertion( "FMA:14582") AnnotationAssertion( "MA:0002692") AnnotationAssertion( "galen:WallOfStomach") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "anatomical wall of stomach") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "anatomical wall of ventriculus") AnnotationAssertion( "gastric wall") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "stomach anatomical wall") AnnotationAssertion( "stomach wall") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "ventriculus anatomical wall") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "ventriculus wall") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "wall of ventriculus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001167") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "wall of stomach") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (wall of small intestine) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An anatomical wall that is part of a small intestine [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:35785") AnnotationAssertion( "FMA:14615") AnnotationAssertion( "MA:0002696") AnnotationAssertion( "NCIT:C33573") AnnotationAssertion(Annotation( "ncithesaurus:Small_Intestinal_Wall_Tissue") "UMLS:C1519375") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "anatomical wall of small bowel") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "anatomical wall of small intestine") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "small bowel anatomical wall") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "small bowel wall") AnnotationAssertion( "small intestinal wall") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "small intestine anatomical wall") AnnotationAssertion( "small intestine wall") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "wall of small bowel") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001168") AnnotationAssertion(rdfs:label "wall of small intestine") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (wall of large intestine) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An anatomical wall that is part of a large intestine [Automatically generated definition].") AnnotationAssertion( "EMAPA:35470") AnnotationAssertion( "FMA:14619") AnnotationAssertion( "MA:0002695") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "anatomical wall of large intestine") AnnotationAssertion( "large intestinal wall") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "large intestine anatomical wall") AnnotationAssertion( "large intestine wall") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001169") AnnotationAssertion(rdfs:label "wall of large intestine") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (mesentery of small intestine) AnnotationAssertion(Annotation( ) "The peritoneum responsible for connecting the jejunum and ileum (parts of the small intestine) to the back wall of the abdomen. Between the two sheets of peritoneum are blood vessels, lymph vessels, and nerves. This allows these parts of the small intestine to move relatively freely within the abdominopelvic cavity. The brain, however, cannot map sensation accurately, so sensation is usually referred to the midline, an example of referred pain[WP].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37745") AnnotationAssertion( "FMA:14643") AnnotationAssertion( "MA:0001555") AnnotationAssertion(Annotation( ) "mesentery (proper)") AnnotationAssertion(Annotation( "FMA:14643") "mesentery proper") AnnotationAssertion(Annotation( "FMA:14643") "small intestinal mesentery") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "small intestine mesentery") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001170") AnnotationAssertion(rdfs:label "mesentery of small intestine") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (portal lobule) AnnotationAssertion(Annotation( "MP:0008992") "The triangular region on the periphery of the liver lobules that contain a bile duct and a terminal branch of the hepatic artery and portal vein, and may also include a lymphatic vessel.") AnnotationAssertion( ) AnnotationAssertion( "FMA:14653") AnnotationAssertion( "MA:0002498") AnnotationAssertion( "NCIT:C33341") AnnotationAssertion(Annotation( "ncithesaurus:Portal_Lobule") "UMLS:C0682620") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001171") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "portal lobule") SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf(Annotation( "MA"^^xsd:string) Annotation( "MP"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (hepatic acinus) AnnotationAssertion(Annotation( ) Annotation( ) "The functional unit of the liver, consisting of a mass of hepatocytes from adjacent liver lobules aligned around the hepatic arterioles and portal venules just as they anastomose into sinusoids.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:35497") AnnotationAssertion( "FMA:14654") AnnotationAssertion( "MA:0002496") AnnotationAssertion( "NCIT:C32992") AnnotationAssertion(Annotation( "ncithesaurus:Liver_Acinus") "UMLS:C0227519") AnnotationAssertion( "liver acinus") AnnotationAssertion( "portal acinus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001172") AnnotationAssertion(rdfs:label "hepatic acinus") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "cjm"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) # Class: (biliary tree) AnnotationAssertion(Annotation( ) "A complex network of conduits that begins with the canals of Hering (intralobar bile duct) and progressively merges into a system of interlobular, septal, and major ducts which then coalesce to form the extrahepatic bile ducts, which finally deliver bile to the intestine, and in some species to the gallbladder.") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0011020") Annotation( "AAO"^^xsd:string) Annotation( "UBERON:0001173") "Hollow tree organ, the organ parts of which consist of the bile ducts.[AAO]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0011020") AnnotationAssertion( "EMAPA:35172") AnnotationAssertion( "FMA:14665") AnnotationAssertion(Annotation( "ncithesaurus:Biliary_Tract") "UMLS:C0005423") AnnotationAssertion( "XAO:0000455") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "MA:0001273") "biliary tract") AnnotationAssertion( "UBERON:0001173") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "The path in many species is as follows: Bile canaliculi -> Canals of Hering (intralobar bile duct) -> interlobular bile ducts -> intrahepatic bile ducts -> left and right hepatic ducts merge to form -> common hepatic duct *exits liver* and joins -> cystic duct (from gall bladder) forming -> common bile duct -> joins with pancreatic duct -> forming ampulla of Vater -> enters duodenum [WP]") AnnotationAssertion(rdfs:label "biliary tree") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (common bile duct) AnnotationAssertion(Annotation( "MGI:csmith"^^xsd:string) Annotation( "MP:0009495") "The part of the biliary tree formed by the union of the cystic duct and the common hepatic duct.") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0005165") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:Curator") "Digestive system duct that collects bile from the hepatic bile duct and the cystic duct.[TAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000214") Annotation( "VHOG"^^xsd:string) Annotation( ) "The duct formed by the union of the common hepatic and cystic ducts. [Elsevier's_encyclopaedic_dictionary_of_medicine, Part_B:_Anatomy_(1988)_Amsterdam_etc.:_Elsevier, adapted_from_Dorian_AF][VHOG]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0000303") AnnotationAssertion( "EHDAA:3981") AnnotationAssertion( "EMAPA:17201") AnnotationAssertion( "FMA:14667") AnnotationAssertion( "GAID:282") AnnotationAssertion( "MA:0001631") AnnotationAssertion( "MESH:D003135") AnnotationAssertion( "NCIT:C12698") AnnotationAssertion( "TAO:0005165") AnnotationAssertion(Annotation( "ncithesaurus:Common_Bile_Duct") "UMLS:C0009437") AnnotationAssertion( "VHOG:0000214") AnnotationAssertion( "ZFA:0005165") AnnotationAssertion( "galen:CommonBileDuct") AnnotationAssertion( "ductus choledochus (biliaris)") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "ductus choledochus") AnnotationAssertion( "UBERON:0001174") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "common bile duct") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/5/5d/Digestive_system_showing_bile_duct.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (common hepatic duct) AnnotationAssertion(Annotation( ) Annotation( "ZFIN:curator"^^xsd:string) "Predominantly extrahepatic bile duct which is formed by the junction of the right and left hepatic ducts, which are predominantly intrahepatic, and, in turn, joins the cystic duct to form the common bile duct[GAID]. The common hepatic duct is the duct formed by the convergence of the right hepatic duct (which drains bile from the right functional lobe of the liver) and the left hepatic duct (which drains bile from the left functional lobe of the liver). The common hepatic duct then joins the cystic duct coming from the gallbladder to form the common bile duct[WP].") AnnotationAssertion( "TODO - MA distinguishes between bile duct, hepatic duct, common bile duct and common hepatic duct. in FMA hepatic duct and common hepatic duct are the same. Common is part of extra-hepatic part") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000220") Annotation( "VHOG"^^xsd:string) Annotation( ) "The duct which conveys the bile from the liver and unites with the cystic duct to form the common bile duct. [Dorian_AF, Elsevier's_encyclopaedic_dictionary_of_medicine, Part_B:_Anatomy_(1988)_Amsterdam_etc.:_Elsevier][VHOG]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:19101") AnnotationAssertion( "FMA:14668") AnnotationAssertion( "GAID:286") AnnotationAssertion( "MA:0002660") AnnotationAssertion( "MESH:D006500") AnnotationAssertion( "NCIT:C32356") AnnotationAssertion(Annotation( "ncithesaurus:Common_Hepatic_Duct") "UMLS:C0019149") AnnotationAssertion( "VHOG:0000220") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "ductus hepaticus communis") AnnotationAssertion( "hepatic duct") AnnotationAssertion( "UBERON:0001175") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "common hepatic duct") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/4/48/Illu_liver_gallbladder.jpg"^^xsd:anyURI) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf(Annotation( "MA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "Wikipedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "Wikipedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "definitional"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (right hepatic duct) AnnotationAssertion(Annotation( ) "The duct that drains bile from the right half of the liver and joins the left hepatic duct to form the common hepatic duct.") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000217") Annotation( "VHOG"^^xsd:string) Annotation( ) "The duct which drains bile from the right half of the liver and unites with the left hepatic duct to form the common hepatic duct. [adapted_from_http://www.medterms.com/script/main/art.asp?articlekey=26032][VHOG]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0001727") AnnotationAssertion( "EHDAA:3992") AnnotationAssertion( "EMAPA:32797") AnnotationAssertion( "FMA:14669") AnnotationAssertion( "MA:0001639") AnnotationAssertion( "NCIT:C33476") AnnotationAssertion(Annotation( "ncithesaurus:Right_Hepatic_Duct") "UMLS:C0227557") AnnotationAssertion( "VHOG:0000217") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "ductus hepaticus dexter") AnnotationAssertion( "UBERON:0001176") AnnotationAssertion(rdfs:label "right hepatic duct") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (left hepatic duct) AnnotationAssertion(Annotation( ) "The duct that drains bile from the left half of the liver and joins the right hepatic duct to form the common hepatic duct.") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000218") Annotation( "VHOG"^^xsd:string) Annotation( ) "The duct which drains bile from the left half of the liver and unites with the right hepatic duct to form the common hepatic duct. [adapted_from_http://www.medterms.com/script/main/art.asp?articlekey=26032][VHOG]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0000941") AnnotationAssertion( "EHDAA:3990") AnnotationAssertion( "EMAPA:32795") AnnotationAssertion( "FMA:14670") AnnotationAssertion( "MA:0001638") AnnotationAssertion( "NCIT:C32960") AnnotationAssertion(Annotation( "ncithesaurus:Left_Hepatic_Duct") "UMLS:C0227560") AnnotationAssertion( "VHOG:0000218") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "ductus hepaticus sinister") AnnotationAssertion( "UBERON:0001177") AnnotationAssertion(rdfs:label "left hepatic duct") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (visceral peritoneum) AnnotationAssertion(Annotation( ) Annotation( ) "The inner layer of peritoneum that is wrapped around organs located inside the intraperitoneal space.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:16592") AnnotationAssertion( "FMA:14703") AnnotationAssertion( "TAO:0005132") AnnotationAssertion( "VHOG:0001528") AnnotationAssertion( "ZFA:0005132") AnnotationAssertion(Annotation( "UBERON:cjm"^^xsd:string) "visceral serous membrane of peritoneum") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001178") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "visceral peritoneum") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/5/5f/Gray1040.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (peritoneal cavity) AnnotationAssertion(Annotation( ) Annotation( ) Annotation( ) "Anatomical cavity bounded by visceral and parietal peritoneum.") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000852") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( ) "The potential space between the parietal and visceral layers of the peritoneum, which are normally in contact. The peritoneal cavity is divided into the greater and lesser sac. The greater sac is the peritoneal cavity, and the lesser sac is the omental bursa. [TFD][VHOG]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000852") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0471090588 Hildebrand M, Analysis of vertebrate structure (1983) p.205-206") "In hagfishes a transverse septum extends upward from the ventral body wall posterior to the heart, partly separating an anterior pericardial cavity from a larger peritoneal cavity. (...) These basic relationships have not been modified by urodeles. The small pericardial cavity remains far forward where it is separated by a transverse septum from the principal coelom, which may now be called a pleuroperitoneal cavity because slender lungs are present. (...) The heart [of other tetrapods] is separated from the lungs (and liver if present) by more or less horizontal partitions that have their origin in the embryo as folds on the serous membrane of the right and left lateral body walls. These grow out to join in the midline of the body. They are called lateral mesocardia (birds) or pleuropericardial membranes. Posteriorly they join the transverse septum to form the adult pericardial membrane, or pericardium. (...) In their partitioning of their coelom, embryonic mammals resemble first early fishes (incomplete partition, posterior to heart, consisting of the transverse septum) and then reptiles (pericardium derived from transverse septum and pleuropericardial membranes) Mammals then separate paired pleural cavities from the peritoneal cavity by a diaphragm. The ventral portion of this organ comes from the transverse septum. The dorsal portion is derived from the dorsal mesentery and from still another pair of outgrowths from the lateral body wall, the pleuroperitoneal membranes.[well established][VHOG]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0001782") AnnotationAssertion( "EHDAA2:0001446") AnnotationAssertion( "EMAPA:16138") AnnotationAssertion( "FMA:14704") AnnotationAssertion( "GAID:24") AnnotationAssertion( "MA:0000054") AnnotationAssertion( "MESH:A01.047.025.600.678") AnnotationAssertion( "NCIT:C12769") AnnotationAssertion(Annotation( "ncithesaurus:Peritoneal_Cavity") "UMLS:C1704247") AnnotationAssertion( "VHOG:0000852") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "cavitas peritonealis") AnnotationAssertion(Annotation( "BTO:0001782") "cavitas peritonealis") AnnotationAssertion(Annotation( ) Annotation( ) "saccus serosus peritonei") AnnotationAssertion( "UBERON:0001179") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "peritoneal cavity") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "Wikipedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (superior recess of lesser sac) AnnotationAssertion(Annotation( "EHDAA2"^^xsd:string) "classified as a cavity in EHDAA2, organ segment in FMA. We hedge and use a union") AnnotationAssertion( "UBERON:0006299") AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0001958") AnnotationAssertion( "EHDAA:2343") AnnotationAssertion( "EMAPA:18049") AnnotationAssertion( "FMA:14708") AnnotationAssertion( "MA:0000447") AnnotationAssertion(Annotation( "MA:0000447") "omental bursa superior recess") AnnotationAssertion(Annotation( "FMA:14708") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "recessus superior bursae omentalis") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) Annotation( ) "recessus superior bursae omentalis") AnnotationAssertion(Annotation( "FMA:14708") "recessus superior omentalis") AnnotationAssertion(Annotation( "FMA:14708") "superior omental bursa") AnnotationAssertion(Annotation( "EHDAA2:0001958") "superior recess") AnnotationAssertion(Annotation( "FMA:14708") "superior recess of omental bursa") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001180") AnnotationAssertion(rdfs:label "superior recess of lesser sac") SubClassOf( ) SubClassOf(Annotation( "EMAPA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (inferior recess of lesser sac) AnnotationAssertion( "UBERON:0006249") AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0000825") AnnotationAssertion( "EHDAA:6083") AnnotationAssertion( "EMAPA:18048") AnnotationAssertion( "FMA:14709") AnnotationAssertion( "MA:0000446") AnnotationAssertion(Annotation( "FMA:14709") "inferior omental bursa") AnnotationAssertion(Annotation( "EHDAA2:0000825") "inferior recess") AnnotationAssertion(Annotation( "FMA:14709") "inferior recess of omental bursa") AnnotationAssertion(Annotation( "MA:0000446") "omental bursa inferior recess") AnnotationAssertion(Annotation( "FMA:14709") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "recessus inferior bursae omentalis") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) Annotation( ) "recessus inferior bursae omentalis") AnnotationAssertion(Annotation( "FMA:14709") "recessus inferior omentalis") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001181") AnnotationAssertion(rdfs:label "inferior recess of lesser sac") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (superior mesenteric artery) AnnotationAssertion(Annotation( "MESH:A07.231.114.565.755") "Mesenteric artery that supplies the whole length of the small intestine except the superior part of the duodenum. It also supplies the cecum and the ascending part of the colon and about half the transverse part of the colon. It arises from the anterior surface of the aorta below the celiac artery at the level of the first lumbar vertebra.") AnnotationAssertion(Annotation( "BTO"^^xsd:string) "Origin: abdominal aorta; branches, inferior pancreaticoduodenal, jejunal, ileal, ileocolic, right colic, and middle colic arteries; distribution: small intestine, proximal half of colon") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0002303") AnnotationAssertion( "EHDAA2:0001949") AnnotationAssertion( "EHDAA:3358") AnnotationAssertion( "EHDAA:5313") AnnotationAssertion( "EMAPA:18619") AnnotationAssertion( "FMA:14749") AnnotationAssertion( "GAID:502") AnnotationAssertion( "MA:0002005") AnnotationAssertion( "MESH:D017538") AnnotationAssertion( "NCIT:C33685") AnnotationAssertion( "OpenCyc:Mx4rwE5KipwpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Superior_Mesenteric_Artery") "UMLS:C0162861") AnnotationAssertion( "VHOG:0000754") AnnotationAssertion( "galen:SuperiorMesentericArtery") AnnotationAssertion( "superior mesenteric arterial tree") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "arteria mesenterica superior") AnnotationAssertion(Annotation( "BTO:0002303") "arteria mesenterica superior") AnnotationAssertion( "UBERON:0001182") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "superior mesenteric artery") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/6/68/Gray1099.png"^^xsd:anyURI) AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/c/c0/Superior_mesenteric_a.gif"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (inferior mesenteric artery) AnnotationAssertion(Annotation( ) "Mesenteric artery that supplies the large intestine from the left colic (or splenic) flexure to the upper part of the rectum, which includes the descending colon, the sigmoid colon, and part of the rectum. Proximally, its territory of distribution overlaps (forms a watershed) with the middle colic artery, and therefore the superior mesenteric artery. The SMA and IMA anastomose via the marginal artery (artery of Drummond). The territory of distribution of the IMA is more or less equivalent to the embryonic hindgut. [WP,unvetted].") AnnotationAssertion(Annotation( ) "IMA") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0002302") AnnotationAssertion( "EHDAA2:0000817") AnnotationAssertion( "EHDAA:4345") AnnotationAssertion( "EMAPA:18618") AnnotationAssertion( "FMA:14750") AnnotationAssertion( "GAID:501") AnnotationAssertion( "MA:0002004") AnnotationAssertion( "MESH:D017537") AnnotationAssertion( "NCIT:C32780") AnnotationAssertion( "OpenCyc:Mx4rv-t-S5wpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Inferior_Mesenteric_Artery") "UMLS:C0162860") AnnotationAssertion( "VHOG:0001116") AnnotationAssertion( "galen:InferiorMesentericArtery") AnnotationAssertion( "inferior mesenteric arterial tree") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "arteria mesenterica inferior") AnnotationAssertion(Annotation( "BTO:0002302") "arteria mesenterica inferior") AnnotationAssertion( "UBERON:0001183") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "inferior mesenteric artery") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/e/e4/Gray538.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (renal artery) AnnotationAssertion(Annotation( ) Annotation( "ISBN:0073040584"^^xsd:string) "One of two laterally paired arteries that supplies the kidneys. These are large arteries that branch from the dorsal aorta in primitive vertebrates.") AnnotationAssertion( "renal arteries vary widely even in humans. Sub-structures should be checked for taxon variability.") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0010223") Annotation( "AAO"^^xsd:string) Annotation( "AAO:BJB"^^xsd:string) "Artery which supplies blood via branches to the gonads, oviducts, and kidneys.[AAO]") AnnotationAssertion(Annotation( "Wikipedia") Annotation( ) "The renal arteries normally arise off the side of the abdominal aorta, immediately below the superior mesenteric artery, and supply the kidneys with blood. Each is directed across the crus of the diaphragm, so as to form nearly a right angle with the aorta. The renal arteries carry a large portion of total blood flow to the kidneys. Up to a third of total cardiac output can pass through the renal arteries to be filtered by the kidneys. The arterial supply of the kidneys is variable and there may be one or more renal arteries supplying each kidney. It is located above the renal vein. It has a radius of approximately 0.25cm, 0.26 cm at the root. The measured mean diameter can differ depending on the imaging method used. For example, the diameter was found to be 5.04 ± 0.74 mm using ultrasound, but 5.68 ± 1.19 mm using angiography. [WP,unvetted].[Wikipedia]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010223") AnnotationAssertion( "BTO:0001165") AnnotationAssertion( "EFO:0002552") AnnotationAssertion( "EHDAA2:0004100") AnnotationAssertion( "EHDAA:5321") AnnotationAssertion( "EHDAA:8594") AnnotationAssertion( "EMAPA:28373") AnnotationAssertion( "FMA:14751") AnnotationAssertion( "GAID:507") AnnotationAssertion( "MA:0002035") AnnotationAssertion( "MESH:D012077") AnnotationAssertion( "NCIT:C12778") AnnotationAssertion( "OpenCyc:Mx4rveOFHpwpEbGdrcN5Y29ycA") AnnotationAssertion( "RETIRED_EHDAA2:0001600") AnnotationAssertion( "TAO:0000420") AnnotationAssertion(Annotation( "ncithesaurus:Renal_Artery") "UMLS:C0035065") AnnotationAssertion( "ZFA:0000420") AnnotationAssertion( "galen:RenalArtery") AnnotationAssertion( "renal arterial tree") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "arteria renalis") AnnotationAssertion(Annotation( ) "renal arteries") AnnotationAssertion( "UBERON:0001184") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "renal artery") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/d/da/Gray1120.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (right renal artery) AnnotationAssertion(Annotation( ) "Renal artery that supplies the right kidney.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37380") AnnotationAssertion( "FMA:14752") AnnotationAssertion( "MA:0002037") AnnotationAssertion( "NCIT:C52740") AnnotationAssertion( "OpenCyc:Mx4rtW8I0KgEEdudWQACs5b6Bw") AnnotationAssertion( "OpenCyc:Mx8Ngh4rvgHsHZwpEbGdrcN5Y29ycB4rveOFHpwpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Right_Renal_Artery") "UMLS:C0226332") AnnotationAssertion( "right renal arterial tree") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001185") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "The right [renal artery] passes behind the inferior vena cava, the right renal vein, the head of the pancreas, and the descending part of the duodenum[WP]") AnnotationAssertion(rdfs:label "right renal artery") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/d/da/Gray1120.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (left renal artery) AnnotationAssertion(Annotation( ) "Renal artery that supplies the left kidney.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37098") AnnotationAssertion( "FMA:14753") AnnotationAssertion( "MA:0002036") AnnotationAssertion( "NCIT:C52741") AnnotationAssertion( "OpenCyc:Mx4rtW8I0agEEdudWQACs5b6Bw") AnnotationAssertion( "OpenCyc:Mx8Ngh4rvgIFoJwpEbGdrcN5Y29ycB4rveOFHpwpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Left_Renal_Artery") "UMLS:C0226333") AnnotationAssertion( "left renal arterial tree") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001186") AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "The left [renal artery] is somewhat higher than the right; it lies behind the left renal vein, the body of the pancreas and the splenic vein, and is crossed by the inferior mesenteric vein[WP]") AnnotationAssertion(rdfs:label "left renal artery") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (testicular artery) AnnotationAssertion(Annotation( ) Annotation( ) "One of a pair of arteries that is a branch of the abdominal aorta that supplies blood to a male gonad.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:18621") AnnotationAssertion( "FMA:14758") AnnotationAssertion( "MA:0002063") AnnotationAssertion( "testicular arterial tree") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "arteria testicularis") AnnotationAssertion(Annotation( ) "internal spermatic") AnnotationAssertion(Annotation( ) "internal spermatic arteries") AnnotationAssertion(Annotation( ) "internal spermatic artery") AnnotationAssertion(Annotation( ) "internal spermatic vessels") AnnotationAssertion(Annotation( ) "spermatic arteries") AnnotationAssertion(Annotation( ) "spermatic artery") AnnotationAssertion(Annotation( ) "spermatic vessels") AnnotationAssertion(Annotation( ) "testicular arteries") AnnotationAssertion( "UBERON:0001187") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "testicular artery") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/a/af/Gray531.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (right testicular artery) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A testicular artery that supplies a right testicle.") AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37382") AnnotationAssertion( "FMA:14759") AnnotationAssertion( "MA:0002042") AnnotationAssertion( "NCIT:C52738") AnnotationAssertion(Annotation( "ncithesaurus:Right_Spermatic_Artery") "UMLS:C0734076") AnnotationAssertion( "right spermatic artery") AnnotationAssertion( "trunk of right testicular arterial tree") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001188") AnnotationAssertion(rdfs:label "right testicular artery") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (left testicular artery) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A testicular artery that supplies a left testicle.") AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37099") AnnotationAssertion( "FMA:14760") AnnotationAssertion( "MA:0002041") AnnotationAssertion( "NCIT:C52739") AnnotationAssertion(Annotation( "ncithesaurus:Left_Spermatic_Artery") "UMLS:C0734077") AnnotationAssertion( "left spermatic artery") AnnotationAssertion( "trunk of left testicular arterial tree") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001189") AnnotationAssertion(rdfs:label "left testicular artery") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (ovarian artery) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An artery that supplies an ovary.") AnnotationAssertion(Annotation( ) "In human anatomy, the ovarian artery is a blood vessel that supplies oxygenated blood to the ovary. It arises from the abdominal aorta below the renal artery, and does not pass out of the abdomiproperty_value external_definitioncavity. It can be found in the suspensory ligament of the ovary. [WP].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:18620") AnnotationAssertion( "FMA:14761") AnnotationAssertion( "MA:0002012") AnnotationAssertion( "NCIT:C33242") AnnotationAssertion( "OpenCyc:Mx4rwOa9PZwpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Ovarian_Artery") "UMLS:C0226411") AnnotationAssertion( "ovarian arterial tree") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "arteria ovarica") AnnotationAssertion( "UBERON:0001190") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "ovarian artery") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/a/ae/Gray1170.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (common iliac artery) AnnotationAssertion(Annotation( ) "The common iliac arteries are two large arteries, about 4cm long in adults but more than a centimetre in diameter, that originate from the aortic bifurcation. The arteries run inferolaterally, along the medial border of the psoas muscles to the pelvic brim, where they bifurcate into the external iliac artery and internal iliac artery. The common iliac artery, and all of its branches, exist as paired structures (that is to say, there is one on the left side and one on the right). The distribution of the common iliac artery is basically the pelvis and lower limb on the corresponding side. Both common iliac arteries are accompanied along their course by common iliac veins. [WP,unvetted].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0000311") AnnotationAssertion( "EHDAA:2553") AnnotationAssertion( "EMAPA:17310") AnnotationAssertion( "FMA:14764") AnnotationAssertion( "MA:0001972") AnnotationAssertion( "NCIT:C32357") AnnotationAssertion( "OpenCyc:Mx4rvkZ7ZpwpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Common_Iliac_Artery") "UMLS:C1261084") AnnotationAssertion( "common iliac arterial tree") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "arteria iliaca communis") AnnotationAssertion( "UBERON:0001191") AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "See notes for parent class") AnnotationAssertion(rdfs:label "common iliac artery") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/6/6e/Iliac_artery_bifurcation_and_aorta.PNG"^^xsd:anyURI) SubClassOf(Annotation( "MA"^^xsd:string) ) SubClassOf( ) # Class: (left gastric artery) AnnotationAssertion(Annotation( ) "An artery that arises from the celiac artery and supplies the stomach.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:35374") AnnotationAssertion( "FMA:14768") AnnotationAssertion( "MA:0001961") AnnotationAssertion( "NCIT:C32654") AnnotationAssertion( "OpenCyc:Mx4rwMjqKZwpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Gastric_Artery") "UMLS:C0226299") AnnotationAssertion( "galen:LeftGastricArtery") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "arteria gastrica sinistra") AnnotationAssertion(Annotation( "FMA:14768") "gastric artery") AnnotationAssertion( "UBERON:0001192") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "left gastric artery") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/6/65/Gray532.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (hepatic artery) AnnotationAssertion(Annotation( ) Annotation( ) "An artery that supplies the liver.") AnnotationAssertion( "currently defined in a generic fashion.") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0005161") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "Artery that supplies blood to the liver.[TAO]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0004307") AnnotationAssertion( "EMAPA:17859") AnnotationAssertion( "FMA:14769") AnnotationAssertion( "GAID:496") AnnotationAssertion( "MA:0001963") AnnotationAssertion( "MESH:D006499") AnnotationAssertion( "NCIT:C32729") AnnotationAssertion( "OpenCyc:Mx4rvzKtFpwpEbGdrcN5Y29ycA") AnnotationAssertion( "TAO:0005161") AnnotationAssertion(Annotation( "ncithesaurus:Hepatic_Artery") "UMLS:C0019145") AnnotationAssertion( "ZFA:0005161") AnnotationAssertion( "galen:HepaticArtery") AnnotationAssertion(Annotation( ) "arteria hepatica propria") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0004307") "arteria hepatica") AnnotationAssertion( "UBERON:0001193") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "hepatic artery") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/4/4c/Common_and_proper_hepatic_artery.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (splenic artery) AnnotationAssertion(Annotation( ) "An artery that supplies the spleen.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:19216") AnnotationAssertion( "FMA:14773") AnnotationAssertion( "GAID:510") AnnotationAssertion( "MA:0001991") AnnotationAssertion( "MA:0003177") AnnotationAssertion( "MESH:D013157") AnnotationAssertion( "NCIT:C33597") AnnotationAssertion( "OpenCyc:Mx4rv0cb2ZwpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Splenic_Artery") "UMLS:C0037996") AnnotationAssertion( "galen:SplenicArtery") AnnotationAssertion(Annotation( ) Annotation( ) "arteria splenica") AnnotationAssertion(Annotation( "MA:0001991") "lienal artery") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "arteria lienalis") AnnotationAssertion( "UBERON:0001194") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "splenic artery") AnnotationAssertion(rdfs:seeAlso "https://github.com/obophenotype/uberon/issues/268"^^xsd:anyURI) AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/a/a2/Gray1188.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses( ) # Class: (inferior pancreaticoduodenal artery) AnnotationAssertion(Annotation( ) "The inferior pancreaticoduodenal artery is a branch of the superior mesenteric artery or from its first intestinal branch, opposite the upper border of the inferior part of the duodenum. It courses to the right between the head of the pancreas and duodenum, and then ascends to anastomose with the anterior and posterior superior pancreaticoduodenal artery. It distributes branches to the head of the pancreas and to the descending and inferior parts of the duodenum. [WP,unvetted].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37086") AnnotationAssertion( "FMA:14805") AnnotationAssertion( "MA:0002014") AnnotationAssertion( "NCIT:C32786") AnnotationAssertion(Annotation( "ncithesaurus:Inferior_Pancreatico-duodenal_artery") "UMLS:C0226319") AnnotationAssertion( "inferior pancreatico-duodenal artery") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "arteriae pancreaticoduodenales inferiores") AnnotationAssertion( "UBERON:0001195") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "inferior pancreaticoduodenal artery") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/3/3b/Gray533.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (middle colic artery) AnnotationAssertion(Annotation( ) "The middle colic artery is a branch of the superior mesenteric artery that mostly supplies the transverse colon. It arises just below the pancreas, and, passing downward and forward between the layers of the transverse mesocolon, divides into two branches: right and left. The right branch anastomoses with the right colic artery The left branch anastomoses with the left colic artery, a branch of the inferior mesenteric artery. The arches thus formed are placed about two fingers' breadth from the transverse colon, to which they distribute branches. [WP,unvetted].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37106") AnnotationAssertion( "FMA:14810") AnnotationAssertion( "MA:0002007") AnnotationAssertion( "NCIT:C52981") AnnotationAssertion(Annotation( "ncithesaurus:Middle_Colic_Artery") "UMLS:C0226328") AnnotationAssertion( "galen:MiddleColicArtery") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "arteria colica media") AnnotationAssertion( "UBERON:0001196") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "middle colic artery") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/c/cb/Gray537.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (ileocolic artery) AnnotationAssertion(Annotation( ) "The Ileocolic Artery is the lowest branch arising from the concavity of the superior mesenteric artery. It passes downward and to the right behind the peritoneum toward the right iliac fossa, where it divides into a superior and an inferior branch; the inferior anastomoses with the end of the superior mesenteric artery, the superior with the right colic artery. Supplies the cecum, ileum, and appendix. [WP,unvetted].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37083") AnnotationAssertion( "FMA:14815") AnnotationAssertion( "MA:0001970") AnnotationAssertion( "NCIT:C32760") AnnotationAssertion(Annotation( "ncithesaurus:Ileo-colic_Artery") "UMLS:C0226323") AnnotationAssertion( "galen:IleocolicArtery") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "arteria ileocolica") AnnotationAssertion( "UBERON:0001197") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "ileocolic artery") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/a/ad/Gray536.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (superior suprarenal artery) AnnotationAssertion(Annotation( ) "Each (left and right) superior suprarenal artery is a branch of the inferior phrenic artery on that side of the body. The left and right phrenic arteries supply the diaphragm, and come off the aorta. [WP,unvetted].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37122") AnnotationAssertion( "FMA:14863") AnnotationAssertion( "MA:0002057") AnnotationAssertion( "NCIT:C52736") AnnotationAssertion(Annotation( "ncithesaurus:Superior_Suprarenal_Artery") "UMLS:C0580876") AnnotationAssertion(Annotation( ) Annotation( ) "arteriae suprarenales superiores") AnnotationAssertion( "superior adrenal branch of inferior phrenic artery") AnnotationAssertion( "superior suprarenal branch of inferior phrenic artery") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001198") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "superior suprarenal artery") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/6/61/Gray1121.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (mucosa of stomach) AnnotationAssertion(Annotation( ) "The mucosal layer that lines the stomach.") AnnotationAssertion(Annotation( ) "The gastric mucosa is the mucous membrane layer of the stomach which contains the glands and the gastric pits. In men it is about 1 mm thick and its surface is smooth, soft, and velvety. It consists of epithelium, lamina propria, and the muscularis mucosae. In its fresh state, it is of a pinkish tinge at the pyloric end and of a red or reddish-brown color over the rest of its surface. In infancy it is of a brighter hue, the vascular redness being more marked. It is thin at the cardiac extremity, but thicker toward the pylorus. During the contracted state of the organ it is thrown into numerous plaits or rugae, which, for the most part, have a longitudinal direction, and are most marked toward the pyloric end of the stomach, and along the greater curvature. These folds are entirely obliterated when the organ becomes distended. When examined with a lens, the inner surface of the mucous membrane presents a peculiar honeycomb appearance from being covered with funnel-like depressions or foveolae of a polygonal or hexagonal form, which vary from 0.12 to 0.25 mm. in diameter. These are the ducts of the gastric glands, and at the bottom of each may be seen one or more minute orifices, the openings of the gland tubes. Gastric glands are simple or branched tubular glands that emerge on the deeper part of the gastric foveola, inside the gastric areas and outlined by the folds of the mucosa. There are three types of glands: cardiac glands (in the proximal part of the stomach), oxyntic glands (the dominating type of gland), and pyloric glands. The cardiac glands mainly contain mucus producing cells. The bottom part of the oxyntic glands is dominated by zymogen (chief) cells that produce pepsinogen (an inactive precursor of the pepsin enzyme). Parietal cells, which secrete hydrochloric acid are scattered in the glands, with most of them in the middle part. The upper part of the glands consist of mucous neck cells; in this part the dividing cells are seen. The pyloric glands contain mucus-secreting cells. Several types of endocrine cells are found in all regions of the gastric mucosa. In the pyloric glands contain gastrin producing cells (G cells); this hormone stimulates acid production from the parietal cells. ECL (enterochromaffine-like) cells, found in the oxyntic glands release histamine, which also is a powerful stimulant of the acid secretion. The A cells produce glucagon, which mobilizes the hepatic glycogen, and the enterochromaffin cells that produce serotonin, which stimulates the contraction of the smooth muscles. The surface of the mucous membrane is covered by a single layer of columnar epithelium . This epithelium commences very abruptly at the cardiac orifice, where there is a sudden transition from the stratified epithelium of the esophagus. The epithelial lining of the gland ducts is of the same character and is continuous with the general lining of the stomach. [WP,unvetted][Wikipedia:Gastric_mucosa].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0001308") AnnotationAssertion( "CALOHA:TS-0404") AnnotationAssertion( "EMAPA:35817") AnnotationAssertion( "FMA:14907") AnnotationAssertion( "GAID:321") AnnotationAssertion( "MA:0002683") AnnotationAssertion( "MESH:A03.492.766.440") AnnotationAssertion( "NCIT:C32656") AnnotationAssertion( "OpenCyc:Mx8NhB4rvcD6KJwpEbGdrcN5Y29ycB4rvmKNOpwpEbGdrcN5Y29ycB4rvVj5FpwpEbGdrcN5Y29ycB4rvVjlqpwpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Gastric_Mucosa") "UMLS:C0017136") AnnotationAssertion( "galen:GastricMucosa") AnnotationAssertion( "gastric mucosa") AnnotationAssertion( "gastric mucous membrane") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of organ of stomach") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of organ of ventriculus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of ventriculus") AnnotationAssertion( "mucous membrane of stomach") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucous membrane of ventriculus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "organ mucosa of stomach") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "organ mucosa of ventriculus") AnnotationAssertion( "stomach mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "stomach mucosa of organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "stomach mucous membrane") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "stomach organ mucosa") AnnotationAssertion( "tunica mucosa (gaster)") AnnotationAssertion(Annotation( "FMA:14907") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "tunica mucosa gastricae") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "ventriculus mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "ventriculus mucosa of organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "ventriculus mucous membrane") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "ventriculus organ mucosa") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0001308") "Magenschleimhaut") AnnotationAssertion(Annotation( ) Annotation( ) "tunica mucosa gastris") AnnotationAssertion(Annotation( "BTO:0001308") "tunica mucosa gastris") AnnotationAssertion( "UBERON:0001199") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "mucosa of stomach") AnnotationAssertion( "Wikipedia:File:Normal_gastric_mucosa_intermed_mag.jpg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (submucosa of stomach) AnnotationAssertion(Annotation( "MGI:csmith"^^xsd:string) Annotation( "MP:0010794") "The fibrous connective tissue layer beneath the stomach mucosa.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0002110") AnnotationAssertion( "EMAPA:35825") AnnotationAssertion( "FMA:14908") AnnotationAssertion( "MA:0002685") AnnotationAssertion( "NCIT:C32663") AnnotationAssertion(Annotation( "ncithesaurus:Gastric_Submucosa") "UMLS:C0227211") AnnotationAssertion( "gastric submucosa") AnnotationAssertion( "stomach submucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "submucosa of ventriculus") AnnotationAssertion( "tela submucosa (gaster)") AnnotationAssertion(Annotation( "FMA:14908") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "tela submucosa gastricae") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "ventriculus submucosa") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0002110") "submucous layer of stomach") AnnotationAssertion(Annotation( "BTO:0002110") "tela submucosa ventriculi") AnnotationAssertion( "UBERON:0001200") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "submucosa of stomach") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (serosa of stomach) AnnotationAssertion(Annotation( "MGI:csmith"^^xsd:string) Annotation( "MP:0010793") "The outermost layer of the stomach wall, consisting of layers of connective tissue continuous with the peritoneum.") AnnotationAssertion( "TODO - check serosa/peritoneum") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:35822") AnnotationAssertion( "FMA:14914") AnnotationAssertion( "MA:0001626") AnnotationAssertion( "NCIT:C32662") AnnotationAssertion(Annotation( "ncithesaurus:Gastric_Serosal_Surface") "UMLS:C1517453") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "anatomical wall of stomach serosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "anatomical wall of stomach serous membrane") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "anatomical wall of ventriculus serosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "anatomical wall of ventriculus serous membrane") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "gastric wall serosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "gastric wall serous membrane") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "serosa of anatomical wall of stomach") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "serosa of anatomical wall of ventriculus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "serosa of gastric wall") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "serosa of stomach anatomical wall") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "serosa of stomach wall") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "serosa of ventriculus anatomical wall") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "serosa of ventriculus wall") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "serosa of wall of stomach") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "serosa of wall of ventriculus") AnnotationAssertion( "serous coat of stomach") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "serous membrane of anatomical wall of stomach") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "serous membrane of anatomical wall of ventriculus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "serous membrane of gastric wall") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "serous membrane of stomach anatomical wall") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "serous membrane of stomach wall") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "serous membrane of ventriculus anatomical wall") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "serous membrane of ventriculus wall") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "serous membrane of wall of stomach") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "serous membrane of wall of ventriculus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "stomach anatomical wall serosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "stomach anatomical wall serous membrane") AnnotationAssertion( "stomach serosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "stomach wall serosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "stomach wall serous membrane") AnnotationAssertion( "tunica serosa (gaster)") AnnotationAssertion(Annotation( "FMA:14914") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "tunica serosa gastricae") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "ventriculus anatomical wall serosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "ventriculus anatomical wall serous membrane") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "ventriculus wall serosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "ventriculus wall serous membrane") AnnotationAssertion( "visceral peritoneum of stomach") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "wall of stomach serosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "wall of stomach serous membrane") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "wall of ventriculus serosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "wall of ventriculus serous membrane") AnnotationAssertion( "uberon") AnnotationAssertion( "gastric serosa") AnnotationAssertion( "UBERON:0001201") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "serosa of stomach") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pyloric sphincter) AnnotationAssertion(Annotation( ) "A strong ring of smooth muscle at the end of the pyloric canal which lets food pass from the stomach to the duodenum. It receives sympathetic innervation from the celiac ganglion[WP].") AnnotationAssertion( ) AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001466") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( ) "(...) the adult Xenopus stomach exhibits both glandular and aglandular regions and a distinct pyloric sphincter similar to that of the amniotic vertebrates (...).[uncertain][VHOG]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0011093") AnnotationAssertion( "EMAPA:19251") AnnotationAssertion( "FMA:14916") AnnotationAssertion( "MA:0002952") AnnotationAssertion( "NCIT:C33433") AnnotationAssertion( "OpenCyc:Mx4rvly2ZZwpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Pyloric_Sphincter") "UMLS:C0227238") AnnotationAssertion( "VHOG:0001466") AnnotationAssertion( "XAO:0000457") AnnotationAssertion(Annotation( ) "pyloric valve") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001202") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "pyloric sphincter") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (muscularis mucosae of stomach) AnnotationAssertion(Annotation( "MGI:csmith"^^xsd:string) Annotation( "MP:0010806") "The thin layer of smooth muscle in the mucosal layer of the stomach that functions to agitate the surface area stomach mucosa by moving the villi back and forth.") AnnotationAssertion( "agitate the surface area stomach mucosa by moving the villi back and forth") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:35818") AnnotationAssertion( "FMA:14924") AnnotationAssertion( "MA:0002684") AnnotationAssertion( "NCIT:C32658") AnnotationAssertion(Annotation( "ncithesaurus:Gastric_Muscularis_Mucosa") "UMLS:C0227200") AnnotationAssertion( "gastric muscularis mucosa") AnnotationAssertion( "lamina muscularis mucosae (tunica mucosa)(gaster)") AnnotationAssertion(Annotation( "FMA:14924") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "lamina muscularis mucosae gastricae") AnnotationAssertion( "lamina muscularis of gastric mucosa") AnnotationAssertion( "muscular coat of stomach") AnnotationAssertion( "stomach muscularis mucosa") AnnotationAssertion(Annotation( "FMA:14924") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "tunica muscularis gastricae") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001203") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "muscularis mucosae of stomach") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (mucosa of small intestine) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A mucosa that is part of a small intestine [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0001259") AnnotationAssertion( "CALOHA:TS-0941") AnnotationAssertion( "EMAPA:35780") AnnotationAssertion( "FMA:14933") AnnotationAssertion( "MA:0002686") AnnotationAssertion( "NCIT:C33568") AnnotationAssertion(Annotation( "ncithesaurus:Small_Intestinal_Mucosa") "UMLS:C0227261") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of organ of small bowel") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of organ of small intestine") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of small bowel") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucous membrane of small bowel") AnnotationAssertion( "mucous membrane of small intestine") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "organ mucosa of small bowel") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "organ mucosa of small intestine") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "small bowel mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "small bowel mucosa of organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "small bowel mucous membrane") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "small bowel organ mucosa") AnnotationAssertion( "small intestinal mucosa") AnnotationAssertion( "small intestine mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "small intestine mucosa of organ") AnnotationAssertion( "small intestine mucous membrane") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "small intestine organ mucosa") AnnotationAssertion( "tunica mucosa (intestinum tenue)") AnnotationAssertion(Annotation( "FMA:14933") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "tunica mucosa intestini tenuis") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001204") AnnotationAssertion(rdfs:label "mucosa of small intestine") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (submucosa of small intestine) AnnotationAssertion(Annotation( ) "Submucosal tissue in the small intestines.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0002112") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37564") AnnotationAssertion( "FMA:14934") AnnotationAssertion( "MA:0001562") AnnotationAssertion( "NCIT:C33572") AnnotationAssertion(Annotation( "ncithesaurus:Small_Intestinal_Submucosa") "UMLS:C0227268") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "small bowel submucosa") AnnotationAssertion( "small intestinal submucosa") AnnotationAssertion( "small intestine submucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "submucosa of small bowel") AnnotationAssertion( "tela submucosa (intestinum tenue)") AnnotationAssertion(Annotation( "BTO:0002112") Annotation( ) "tela submucosa intestini tenuis") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001205") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "submucosa of small intestine") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (serosa of small intestine) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A serous membrane that is part of a small intestine [Automatically generated definition].") AnnotationAssertion( "duodenum, 1st part serosa, 2nd - 4th adventitia") AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37561") AnnotationAssertion( "FMA:14938") AnnotationAssertion( "MA:0001558") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "serosa of small bowel") AnnotationAssertion( "serous coat of small intestine") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "serous membrane of small bowel") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "serous membrane of small intestine") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "small bowel serosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "small bowel serous membrane") AnnotationAssertion( "small intestinal serosa") AnnotationAssertion( "small intestine serosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "small intestine serous membrane") AnnotationAssertion( "tunica serosa (intestinum tenue)") AnnotationAssertion(Annotation( "FMA:14938") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "tunica serosa intestini tenuis") AnnotationAssertion( "visceral peritoneum of small intestine") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001206") AnnotationAssertion(rdfs:label "serosa of small intestine") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (mucosa of large intestine) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A mucosa that is part of a large intestine [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( "CALOHA:TS-2106") AnnotationAssertion( "EMAPA:35467") AnnotationAssertion( "FMA:14969") AnnotationAssertion( "MA:0002688") AnnotationAssertion( "NCIT:C32926") AnnotationAssertion(Annotation( "ncithesaurus:Large_Intestinal_Mucosa") "UMLS:C0734203") AnnotationAssertion( "large intestinal mucosa") AnnotationAssertion( "large intestine mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "large intestine mucosa of organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "large intestine mucous membrane") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "large intestine organ mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of organ of large intestine") AnnotationAssertion( "mucous membrane of large intestine") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "organ mucosa of large intestine") AnnotationAssertion(Annotation( "FMA:14969") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "tunica mucosa intestini crassi") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001207") AnnotationAssertion(rdfs:label "mucosa of large intestine") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (submucosa of large intestine) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A submucosa that is part of a large intestine [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( "BTO:0002111") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37560") AnnotationAssertion( "FMA:14970") AnnotationAssertion( "MA:0002690") AnnotationAssertion( "NCIT:C32930") AnnotationAssertion(Annotation( "ncithesaurus:Large_Intestinal_Submucosa") "UMLS:C0734204") AnnotationAssertion( "large intestinal submucosa") AnnotationAssertion( "large intestine submucosa") AnnotationAssertion(Annotation( "FMA:14970") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "tela submucosa intestini crassi") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0002111") "submucous layer of large intestine") AnnotationAssertion( "UBERON:0001208") AnnotationAssertion(rdfs:label "submucosa of large intestine") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (serosa of large intestine) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A serous membrane that is part of a large intestine [Automatically generated definition].") AnnotationAssertion( "TODO - check serosa/peritoneum") AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37557") AnnotationAssertion( "FMA:14975") AnnotationAssertion( "MA:0001546") AnnotationAssertion( "NCIT:C32929") AnnotationAssertion(Annotation( "ncithesaurus:Large_Intestinal_Serosal_Surface") "UMLS:C1517727") AnnotationAssertion( "large intestinal serosa") AnnotationAssertion( "large intestine serosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "large intestine serous membrane") AnnotationAssertion( "serous coat of large intestine") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "serous membrane of large intestine") AnnotationAssertion(Annotation( "FMA:14975") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "tunica serosa intestini crassi") AnnotationAssertion( "visceral peritoneum of large intestine") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001209") AnnotationAssertion(rdfs:label "serosa of large intestine") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (muscularis mucosae of small intestine) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A muscularis mucosa that is part of a small intestine.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:35781") AnnotationAssertion( "FMA:15051") AnnotationAssertion( "MA:0002687") AnnotationAssertion( "NCIT:C33570") AnnotationAssertion(Annotation( "ncithesaurus:Small_Intestinal_Muscularis_Mucosa") "UMLS:C0227262") AnnotationAssertion( "lamina muscularis mucosae (tunica mucosa)(intestinum tenue)") AnnotationAssertion(Annotation( "FMA:15051") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "lamina muscularis mucosae intestini tenuis") AnnotationAssertion( "lamina muscularis of small intestine mucous membrane") AnnotationAssertion( "small intestine muscularis mucosa") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001210") AnnotationAssertion(rdfs:label "muscularis mucosae of small intestine") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (Peyer's patch) AnnotationAssertion(Annotation( ) Annotation( ) Annotation( "MESH:A10.549.600") Annotation( "MP:0000696") "The protruding lymphoid tissue located on the mucosa of the intestine that is composed of densely packed B cell follicles.") AnnotationAssertion(Annotation( ) ) AnnotationAssertion( "Reptiles have accumulations of lymphocytes in their guts that may be primitive Peyer's patches (Zapata and Solas).") AnnotationAssertion(Annotation( "FMA"^^xsd:string) "FMA has [set of?] [aggregated,small] lymphoid [follice,nodule] of [colon, SI, I, etc]") AnnotationAssertion(Annotation( "MA"^^xsd:string) "Pp is a syn for Aggregated lymphoid follicle of small intestine; but MA uses Pp as covering both SI and LI. MA also includes follicle as a part. WP says duodenum and jejunum lack PPs") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0001784") AnnotationAssertion( "CALOHA:TS-0780") AnnotationAssertion( "EFO:0001381") AnnotationAssertion( "EMAPA:19028") AnnotationAssertion( "GAID:950") AnnotationAssertion( "MA:0000137") AnnotationAssertion( "MESH:A10.549.598") AnnotationAssertion( "NCIT:C12771") AnnotationAssertion(Annotation( "ncithesaurus:Peyer_s_Patch") "UMLS:C0031272") AnnotationAssertion(Annotation( ) "noduli lymphoidei aggregati") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0001784") "Peyers gland") AnnotationAssertion(Annotation( "BTO:0001784") "Peyers patch") AnnotationAssertion( "aggregated lymphoid follicle of intestine") AnnotationAssertion( "aggregated lymphoid nodule") AnnotationAssertion( "UBERON:0001211") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "Peyer's patch") SubClassOf(Annotation( "FMA"^^xsd:string) Annotation( "MA"^^xsd:string) ) SubClassOf(Annotation( "check this") ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (duodenal gland) AnnotationAssertion(Annotation( ) "A compound tubular submucosal gland found in that portion of the duodenum which is above the hepatopancreatic sphincter (Sphincter of Oddi). The main function of these glands is to produce a mucus-rich alkaline secretion (containing bicarbonate)[WP].") AnnotationAssertion( "currently defined as equivalent to any submucosal gland in the duodenum.") AnnotationAssertion(Annotation( "ISBN:9780521617147") "Said to be absent outside mammlian (Andrew 1959) but Ziswiler and Farner (1972) noted similar glands at the gastroduodenal junction of some birds") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0002376") AnnotationAssertion( "EMAPA:36522") AnnotationAssertion( "FMA:15060") AnnotationAssertion( "GAID:314") AnnotationAssertion( "MA:0001551") AnnotationAssertion( "MESH:A03.492.411.620.270.322") AnnotationAssertion( "NCIT:C13010") AnnotationAssertion(Annotation( "ncithesaurus:Brunner_s_Gland") "UMLS:C0006323") AnnotationAssertion(Annotation( "FMA:15060") "Brunner's gland") AnnotationAssertion(Annotation( "FMA:15060") "gland of Brunner") AnnotationAssertion( "submucosal gland of duodenum") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0002376") Annotation( ) "glandula duodenales") AnnotationAssertion(Annotation( "BTO:0002376") Annotation( ) "glandula duodenales Brunneri") AnnotationAssertion( "UBERON:0001212") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "duodenal gland") SubClassOf( ) SubClassOf(Annotation( "compound tubular") ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA, modified") ObjectSomeValuesFrom( )) # Class: (intestinal villus) AnnotationAssertion(Annotation( "MGI:csmith"^^xsd:string) Annotation( "MGI:rbabiuk") Annotation( "MP:0008108") "The tiny hair-like projections that protrude from the inside of the small intestine that contain blood vessels that capture digested nutrients that are absorbed through the intestinal wall; the villi increase the absorptive surface area of the small intestine by approximately 30-fold.") AnnotationAssertion( "in mammals, villi are (largely?) absent from the large intestine, so we treat this as equivalent to small intestinal villus. small/large subdivision may not make sense for all species for which this is present (see ZFA). Note that VHOG quotes ISBN:978-0030223693 as suggesting there are some villi in the large intestine") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0005125") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "The entire digestive tract is lined by well developed villi, which are longest in the intestinal bulb and decrease progressively in size towards the caudal end of the intestine. No crypts are present, but, the regions between the villi, the intervillus pockets, have a crypt-like function. Cells are produced in the intervillus pockets and shed from the villus tips. Crosnier et al. 2005[TAO]") AnnotationAssertion(Annotation( "BTO"^^xsd:string) "the BTO class refers to a generic villous") AnnotationAssertion( "UBERON:0007607") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0003121") AnnotationAssertion( "EMAPA:35784") AnnotationAssertion( "FMA:15072") AnnotationAssertion( "MA:0001563") AnnotationAssertion( "NCIT:C33874") AnnotationAssertion( "TAO:0005125") AnnotationAssertion(Annotation( "ncithesaurus:Villus") "UMLS:C1519988") AnnotationAssertion( "ZFA:0005125") AnnotationAssertion(Annotation( "HP:0011473") Annotation( ) "enteric villi") AnnotationAssertion(Annotation( "HP:0011473") "enteric villous") AnnotationAssertion(Annotation( "HP:0011473") "enteric villus") AnnotationAssertion(Annotation( "ZFA:0005125") Annotation( ) "intestinal villi") AnnotationAssertion(Annotation( ) "villi intestinales") AnnotationAssertion(Annotation( "BTO:0003121") "villus") AnnotationAssertion(Annotation( "FMA:15072") "villus intestinalis (intestinum tenue)") AnnotationAssertion( "uberon") AnnotationAssertion( "intestinal villus layer") AnnotationAssertion(Annotation( "MA:0001563") "small intestine villus") AnnotationAssertion(Annotation( ) Annotation( ) "villi intestinales") AnnotationAssertion( "UBERON:0001213") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "intestinal villus") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/3/38/Small_intestine_low_mag.jpg"^^xsd:anyURI) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf(Annotation( "ZFA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pancreatic tributary of splenic vein) AnnotationAssertion(Annotation( ) "The pancreatic veins consist of several small vessels which drain the body and tail of the pancreas, and open into the trunk of the great pancreatic vein. [WP,unvetted].") AnnotationAssertion(Annotation( "MA"^^xsd:string) "see also MA:0002165 ! lieno-pancreatic vein") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37678") AnnotationAssertion( "FMA:15388") AnnotationAssertion( "MA:0002189") AnnotationAssertion( "NCIT:C53059") AnnotationAssertion(Annotation( "ncithesaurus:Pancreatic_Vein") "UMLS:C0226743") AnnotationAssertion( "pancreatic vein") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001214") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "pancreatic tributary of splenic vein") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA/obol"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (inferior mesenteric vein) AnnotationAssertion(Annotation( ) "A blood vessel that drains blood from the large intestine that usually terminates when reaching the splenic vein, which goes on to form the portal vein with the superior mesenteric vein (SMV). Anatomical variations include the IMV draining into the confluence of the SMV and splenic vein and the IMV draining in the SMV. The IMV lies to the right of the similarly name artery, the inferior mesenteric artery, which originates from the abdominal aorta. [WP,unvetted].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0002782") AnnotationAssertion( "EHDAA2:0000819") AnnotationAssertion( "EHDAA:8712") AnnotationAssertion( "EMAPA:18642") AnnotationAssertion( "FMA:15391") AnnotationAssertion( "MA:0002178") AnnotationAssertion( "NCIT:C32782") AnnotationAssertion( "OpenCyc:Mx4rvcV53ZwpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Inferior_Mesenteric_Vein") "UMLS:C0226754") AnnotationAssertion( "VHOG:0001118") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0002782") "lower mesenteric vein") AnnotationAssertion(Annotation( ) Annotation( ) "vena mesenterica inferior") AnnotationAssertion( "UBERON:0001215") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "inferior mesenteric vein") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/3/33/Gray591.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA/obol"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (jejunal vein) AnnotationAssertion(Annotation( ) Annotation( ) "A tributary of the superior mesenteric vein that drains the jejunum.") AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37160") AnnotationAssertion( "FMA:15402") AnnotationAssertion( "MA:0002153") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "venae jejunales") AnnotationAssertion( "UBERON:0001216") AnnotationAssertion(rdfs:label "jejunal vein") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/3/33/Gray591.png"^^xsd:anyURI) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA/obol"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (ileal vein) AnnotationAssertion(Annotation( "ncithesaurus:Ileal_Vein") "The veins that drain blood from the ileum into the superior mesenteric vein.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37149") AnnotationAssertion( "FMA:15405") AnnotationAssertion( "MA:0002140") AnnotationAssertion( "NCIT:C53046") AnnotationAssertion(Annotation( "ncithesaurus:Ileal_Vein") "UMLS:C1301431") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001217") AnnotationAssertion(rdfs:label "ileal vein") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA"^^xsd:string) Annotation( "Wikipedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (middle colic vein) AnnotationAssertion(Annotation( ) "The middle colic vein drains the transverse colon. It is a tributary of the superior mesenteric vein, and follows the path of its corresponding artery, the middle colic artery. [WP,unvetted].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37174") AnnotationAssertion( "FMA:15406") AnnotationAssertion( "MA:0002181") AnnotationAssertion( "OpenCyc:Mx4rvywYIpwpEbGdrcN5Y29ycA") AnnotationAssertion( "vena colica media (intermedia)") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "vena colica media") AnnotationAssertion( "UBERON:0001218") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "middle colic vein") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/3/33/Gray591.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (ileocolic vein) AnnotationAssertion(Annotation( ) "The ileocolic vein is a vein which drains the ileum, colon, and cecum. [WP,unvetted].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37150") AnnotationAssertion( "FMA:15408") AnnotationAssertion( "MA:0002141") AnnotationAssertion( "NCIT:C53047") AnnotationAssertion(Annotation( "ncithesaurus:Ileocolic_Vein") "UMLS:C0226744") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "vena ileocolica") AnnotationAssertion( "UBERON:0001219") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "ileocolic vein") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/3/33/Gray591.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (quadratus lumborum) AnnotationAssertion(Annotation( ) "An abdominal muscle that inserts on the last rib and transverse processes of lumbar vertebrae. It is irregular and quadrilateral in shape, and broader below than above.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:18524") AnnotationAssertion( "FMA:15569") AnnotationAssertion( "MA:0002362") AnnotationAssertion( "NCIT:C33440") AnnotationAssertion( "OpenCyc:Mx4rvj1wcpwpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Quadratus_Lumborum") "UMLS:C0224380") AnnotationAssertion( "muscle of posterior abdominal wall") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001220") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "quadratus lumborum") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/d/de/Gray1124.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "Last rib and transverse processes of lumbar vertebrae") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "Last rib and transverse processes of lumbar vertebrae") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "Last rib and transverse processes of lumbar vertebrae") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (transversus abdominis muscle) AnnotationAssertion(Annotation( "ISBN:9781435464339") Annotation( "UBERON:cjm"^^xsd:string) "The lateral abdominal wall muscle that is deep to the internal oblique.") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000845") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( ) "One of a pair of transverse abdominal muscles that is the anterolateral muscle of the abdomen, lying immediately under the internal abdominal oblique. [TFD][VHOG]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000845") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0471090588 Hildebrand M, Analysis of vertebrate structure (1983) p.193") "Behind the thorax, the lateral group (of muscles in reptiles and mammals) remains essentially as for amphibians. (It breaks into three sheet-like layers: external oblique muscle, the internal oblique, and the transversus). More anteriorly, however, the ribs, now enlarged, penetrate and alter this group of muscles. The transversus is excluded from the thorax and the external and internal obliques become, respectively, the external and internal intercostal muscles, which contribute to the new function of ventilation of the lungs.[well established][VHOG]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0002078") AnnotationAssertion( "EHDAA:8254") AnnotationAssertion( "EMAPA:18165") AnnotationAssertion( "FMA:15570") AnnotationAssertion( "MA:0002396") AnnotationAssertion( "NCIT:C53179") AnnotationAssertion(Annotation( "ncithesaurus:Transversus_Abdominis") "UMLS:C0224378") AnnotationAssertion( "VHOG:0000845") AnnotationAssertion(Annotation( "FMA:15570") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "musculus transversus abdominis") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) Annotation( ) "musculus transversus abdominis") AnnotationAssertion(Annotation( "FMA:15570") "transverse abdominal") AnnotationAssertion(Annotation( ) Annotation( ) "transversis abdominus") AnnotationAssertion(Annotation( ) "transversus abdominis") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "transversalis") AnnotationAssertion(Annotation( ) "transversalis muscle") AnnotationAssertion(Annotation( ) "transverse abdominal") AnnotationAssertion(Annotation( ) "transverse abdominal muscle") AnnotationAssertion(Annotation( ) "transverse abdominis") AnnotationAssertion(Annotation( ) "transverse abdominus") AnnotationAssertion(Annotation( ) "transversus") AnnotationAssertion(Annotation( ) "transversus abdominis") AnnotationAssertion(Annotation( ) "transversus abdominus") AnnotationAssertion(Annotation( ) "transversus abdominus muscle") AnnotationAssertion( "UBERON:0001221") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "transversus abdominis muscle") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/3/32/Illu_trunk_muscles.jpg"^^xsd:anyURI) SubClassOf(Annotation( "true"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (right ureter) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An ureter that is part of a right side of organism [Automatically generated definition].") AnnotationAssertion( "https://github.com/obophenotype/uberon/wiki/Modeling-paired-structures-Design-Pattern"^^xsd:anyURI) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37373") AnnotationAssertion( "FMA:15571") AnnotationAssertion( "MA:0001685") AnnotationAssertion( "NCIT:C49327") AnnotationAssertion(Annotation( "ncithesaurus:Right_Ureter") "UMLS:C0227682") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001222") AnnotationAssertion(rdfs:label "right ureter") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (left ureter) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An ureter that is part of a left side of organism [Automatically generated definition].") AnnotationAssertion( "https://github.com/obophenotype/uberon/wiki/Modeling-paired-structures-Design-Pattern"^^xsd:anyURI) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37372") AnnotationAssertion( "FMA:15572") AnnotationAssertion( "MA:0001684") AnnotationAssertion( "NCIT:C49324") AnnotationAssertion(Annotation( "ncithesaurus:Left_Ureter") "UMLS:C0227683") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001223") AnnotationAssertion(rdfs:label "left ureter") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (renal pelvis) AnnotationAssertion(Annotation( "MP:0004194") "A funnel shaped proximal portion of the ureter that is formed by convergence of the major calices [MP].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "CALOHA:TS-2230") AnnotationAssertion( "EMAPA:17948") AnnotationAssertion( "FMA:15575") AnnotationAssertion( "GAID:426") AnnotationAssertion( "MA:0000374") AnnotationAssertion( "MESH:D007682") AnnotationAssertion( "NCIT:C12887") AnnotationAssertion(Annotation( "ncithesaurus:Renal_Pelvis") "UMLS:C0227666") AnnotationAssertion( "galen:RenalPelvis") AnnotationAssertion( "kidney pelvis") AnnotationAssertion( "pelvis of ureter") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "p. renallis") AnnotationAssertion(Annotation( "MP:0004194") "pyelum") AnnotationAssertion( "UBERON:0001224") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "In this ontology, the renal pelvis is represented as the area of part-overlap between the kidney and the ureter") AnnotationAssertion(rdfs:label "renal pelvis") AnnotationAssertion( "Illu:kidney2.jpg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "MA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses( ) # Class: (cortex of kidney) AnnotationAssertion(Annotation( ) "Outer cortical portion of the kidney, between the renal capsule and the renal medulla.") AnnotationAssertion( "In the adult metanephros, it forms a continuous smooth outer zone with a number of projections that extend down between the pyramids. It contains the renal corpuscles and the renal tubules except for parts of the loop of Henle which descend into the renal medulla. It also contains blood vessels and cortical collecting ducts. The renal cortex is the part of the kidney where ultrafiltration occurs.[WP]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0001166") AnnotationAssertion( "CALOHA:TS-0503") AnnotationAssertion( "EMAPA:17952") AnnotationAssertion( "FMA:15581") AnnotationAssertion( "GAID:424") AnnotationAssertion( "MA:0000372") AnnotationAssertion( "MESH:D007672") AnnotationAssertion( "NCIT:C12739") AnnotationAssertion(Annotation( "ncithesaurus:Renal_Cortex") "UMLS:C0022655") AnnotationAssertion( "galen:CortexOfKidney") AnnotationAssertion(Annotation( "FMA:15581") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "cortex renalis") AnnotationAssertion( "kidney cortex") AnnotationAssertion( "renal cortex") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001225") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "cortex of kidney") AnnotationAssertion( "Illu:kidney.jpg"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (major calyx) AnnotationAssertion(Annotation( ) "Portion of the urinary collecting system within the kidney that drains several minor calyces.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:18677") AnnotationAssertion( "FMA:15613") AnnotationAssertion( "MA:0001644") AnnotationAssertion(Annotation( ) Annotation( ) "calices renales majores") AnnotationAssertion( "major calix") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "calices renales majores") AnnotationAssertion( "UBERON:0001226") AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "major calyx collects urine from several renal papillae; all major calyces unite to form the renal pelvis") AnnotationAssertion(rdfs:label "major calyx") AnnotationAssertion( "Kidney:PioM.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (minor calyx) AnnotationAssertion(Annotation( ) "Portion of the urinary collecting system within the kidney that drains one renal papilla.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:18678") AnnotationAssertion( "FMA:15614") AnnotationAssertion( "MA:0001645") AnnotationAssertion(Annotation( ) Annotation( ) "calices renales minores") AnnotationAssertion( "minor calix") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "calices renales minores") AnnotationAssertion( "UBERON:0001227") AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "one renal papilla projects into the lumen of one minor calyx; several minor calyces unite to form a major calyx") AnnotationAssertion(rdfs:label "minor calyx") AnnotationAssertion( "Kidney:PioM.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (renal papilla) AnnotationAssertion(Annotation( ) "Tip of renal pyramid projecting into a minor calyx.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0003925") AnnotationAssertion( "EMAPA:35727") AnnotationAssertion( "FMA:15622") AnnotationAssertion( "MA:0002730") AnnotationAssertion( "MESH:D007679") AnnotationAssertion( "NCIT:C33460") AnnotationAssertion(Annotation( "ncithesaurus:Renal_Papilla") "UMLS:C0022666") AnnotationAssertion( "galen:RenalPapilla") AnnotationAssertion(Annotation( "MP:0011303") "kidney papilla") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001228") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "renal papilla") AnnotationAssertion( "Kidney:PioM.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (renal corpuscle) AnnotationAssertion(Annotation( "ISBN:0-683-40008-8"^^xsd:string) Annotation( "MP:0002827") "The structure containing the glomerular capsule and the glomerulus that serves as the initial blood-filtering component of a nephron.") AnnotationAssertion(Annotation( "2012-11-28") Annotation( "BTO:0000333") Annotation( "BTO") Annotation( "BTO:curator") "A mass of arterial capillaries enveloped in a capsule and attached to a tubule in the kidney[BTO]") AnnotationAssertion(Annotation( "2012-11-28") Annotation( "XAO:0000146") Annotation( "XAO") Annotation( "XAO:curator") "A tuft of capillaries found in a Bowman's capsule in which waste products are filtered from the blood and urine formation is initiated. Paired highly vascularized structures of the pronephros, responsible for blood filtration.[XAO]") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0005281") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "The part of the nephron that filters blood.[TAO]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0000333") AnnotationAssertion( "CALOHA:TS-1317") AnnotationAssertion( "EMAPA:28236") AnnotationAssertion( "EMAPA:35726") AnnotationAssertion( "EV:0100385") AnnotationAssertion( "FMA:15625") AnnotationAssertion( "MA:0000376") AnnotationAssertion( "NCIT:C33456") AnnotationAssertion( "TAO:0005281") AnnotationAssertion(Annotation( "ncithesaurus:Renal_Corpuscle") "UMLS:C0227635") AnnotationAssertion( "VHOG:0001262") AnnotationAssertion( "ZFA:0005281") AnnotationAssertion(Annotation( "MA:0000376") Annotation( ) "Malphigian corpuscle") AnnotationAssertion(Annotation( "ZFA:0005281") "Malpighian corpuscle") AnnotationAssertion(Annotation( ) "corpusculum renale") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "corpusculum renis") AnnotationAssertion(Annotation( "MA:0000376") "cortical renal corpuscle") AnnotationAssertion(Annotation( ) "kidney corpuscle") AnnotationAssertion( "UBERON:0001229") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "Together, the Bowmans capsule and the glomerulus comprise the definitive renal corpuscle. http://www.gudmap.org/About/Tutorial/DevMUS.html#DMK_Nephron") AnnotationAssertion(rdfs:label "renal corpuscle") AnnotationAssertion( "Renal:corpuscle.svg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "MA"^^xsd:string) Annotation( "ZFA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (glomerular capsule) AnnotationAssertion(Annotation( ) Annotation( "MGI:pvb") Annotation( "MP:0002828") "A cup-like sac at the expanded beginning of a tubular component of a nephron that contains the glomerulus.") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0010526") Annotation( "AAO"^^xsd:string) Annotation( "AAO:BJB"^^xsd:string) "Anatomical structure found in the kidney consisting of an expanded end of a kidney tubule surrounding a glomerulus and is the major site of filtration.[AAO]") AnnotationAssertion( "Fluids from blood in the glomerulus are collected in the Bowman's capsule and further processed along the nephron to form urine. This process is known as ultrafiltration[WP].") AnnotationAssertion( "One fold of the S-shaped body gives rise to Bowman's capsule[GUDMAP]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010526") AnnotationAssertion( "BTO:0002297") AnnotationAssertion( "EMAPA:27973") AnnotationAssertion( "EMAPA:28257") AnnotationAssertion( "FMA:15626") AnnotationAssertion( "KUPO:0001001") AnnotationAssertion( "MA:0001660") AnnotationAssertion( "NCIT:C32225") AnnotationAssertion( "TAO:0005254") AnnotationAssertion( "TAO:0005310") AnnotationAssertion(Annotation( "ncithesaurus:Bowman_s_Capsule") "UMLS:C0524448") AnnotationAssertion( "ZFA:0005254") AnnotationAssertion( "ZFA:0005310") AnnotationAssertion(Annotation( ) "Bowman's capsule") AnnotationAssertion(Annotation( "KUPO:0001001") "Bowmans capsule") AnnotationAssertion(Annotation( ) "capsula glomerularis") AnnotationAssertion(Annotation( "TAO:0005254") "renal glomerular capsule") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "TAO:0005254") "Bowman's capsule") AnnotationAssertion(Annotation( "BTO:0002297") Annotation( ) "Malphigian capsule") AnnotationAssertion(Annotation( "UBERO:cjm") "Malpighian capsule") AnnotationAssertion(Annotation( "BTO:0002297") "Mueller capsule") AnnotationAssertion(Annotation( "BTO:0002297") "Muellerian capsule") AnnotationAssertion(Annotation( ) "capsula glomeruli") AnnotationAssertion(Annotation( "TAO:0005310") "pronephric glomerular capsule") AnnotationAssertion( "UBERON:0001230") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "glomerular capsule") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/3/30/Gray1130.svg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses( ) # Class: (nephron tubule) AnnotationAssertion(Annotation( ) Annotation( "GO:0072078") "An epithelial tube that is part of the nephron, the functional part of the kidney.") AnnotationAssertion(Annotation( "MA"^^xsd:string) "note that in ISBN:0073040584 (Vertebrates, Kardong), the uriniferous tubule contains the nephron, so we have a separate class, rather than using a synonym, as in MA") AnnotationAssertion( "UBERON:0004210") AnnotationAssertion( "renal tubule") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0000343") AnnotationAssertion( "CALOHA:TS-1262") AnnotationAssertion( "EFO:0003666") AnnotationAssertion( "EMAPA:27782") AnnotationAssertion( "EV:0100387") AnnotationAssertion( "FMA:15627") AnnotationAssertion( "GAID:433") AnnotationAssertion( "MA:0000377") AnnotationAssertion( "MESH:D007684") AnnotationAssertion( "NCIT:C49274") AnnotationAssertion( "TAO:0001287") AnnotationAssertion(Annotation( "ncithesaurus:Renal_Tubule") "UMLS:C0022674") AnnotationAssertion( "ZFA:0001287") AnnotationAssertion(Annotation( "GAID:433") "kidney tubule") AnnotationAssertion( "tubulus renalis") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "MA:0000377") "uriniferous tubule") AnnotationAssertion( "UBERON:0001231") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "nephron tubule") SubClassOf( ) SubClassOf(Annotation( "GO"^^xsd:string) ) SubClassOf(Annotation( "ZFA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "checkme") ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (collecting duct of renal tubule) AnnotationAssertion(Annotation( ) Annotation( "GO:0072044") "The collecting duct is a portion of the nephron through which water flows, moving passively down its concentration gradient.") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0005294") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "Renal duct that collects the output from renal tubules.[TAO]") AnnotationAssertion(Annotation( "FMA"^^xsd:string) "in ISBN:0073040584 (Vertebrates, Kardong), the nephron is adjacent to the collecting tubule, consistent with FMA, but not GO. Wikipedia says: Many sources include the connecting tubule as part of the collecting duct system. However, the embryological origin is more similar to the nephron than it is to the rest of the collecting duct (which derives from the ureteric bud), and other sources therefore classify the connecting tubule with the nephron") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0000761") AnnotationAssertion( "CALOHA:TS-0860") AnnotationAssertion( "EMAPA:28407") AnnotationAssertion( "EV:0100391") AnnotationAssertion( "FMA:15628") AnnotationAssertion( "GAID:434") AnnotationAssertion( "MA:0000371") AnnotationAssertion( "MESH:D007685") AnnotationAssertion( "TAO:0005294") AnnotationAssertion( "ZFA:0005294") AnnotationAssertion(Annotation( "GO:0072044") "collecting duct") AnnotationAssertion( "kidney collecting duct") AnnotationAssertion(Annotation( "FMA:15628") "renal collecting tubule") AnnotationAssertion(Annotation( ) Annotation( ) "tubulus renalis arcuatus") AnnotationAssertion( "tubulus renalis colligens") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "arcuate renal tubule") AnnotationAssertion(Annotation( "BTO:0000761") "collecting duct system") AnnotationAssertion( "collecting tubule") AnnotationAssertion(Annotation( ) "junctional tube") AnnotationAssertion( "kidney collecting tubule") AnnotationAssertion(Annotation( "EMAPA:28407") "ureteric tree") AnnotationAssertion( "UBERON:0001232") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "collecting duct of renal tubule") SubClassOf( ) SubClassOf(Annotation( "checkme") Annotation( "GO"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (right adrenal gland) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An adrenal gland that is in the right side of the abdomen.") AnnotationAssertion( "https://github.com/obophenotype/uberon/wiki/Modeling-paired-structures-Design-Pattern"^^xsd:anyURI) AnnotationAssertion(Annotation( "WP"^^xsd:string) "In humans, the right adrenal gland is triangular shaped") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37357") AnnotationAssertion( "FMA:15629") AnnotationAssertion( "MA:0000719") AnnotationAssertion( "NCIT:C49325") AnnotationAssertion(Annotation( "ncithesaurus:Right_Adrenal_Gland") "UMLS:C0229559") AnnotationAssertion(Annotation( ) "glandula suprarenalis dexter") AnnotationAssertion( "right suprarenal gland") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001233") AnnotationAssertion(rdfs:label "right adrenal gland") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (left adrenal gland) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An adrenal gland that is in the left side of the abdomen.") AnnotationAssertion( "https://github.com/obophenotype/uberon/wiki/Modeling-paired-structures-Design-Pattern"^^xsd:anyURI) AnnotationAssertion(Annotation( "WP"^^xsd:string) "In humans, the left adrenal gland is semilunar shaped") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37356") AnnotationAssertion( "FMA:15630") AnnotationAssertion( "MA:0000718") AnnotationAssertion( "NCIT:C49322") AnnotationAssertion(Annotation( "ncithesaurus:Left_Adrenal_Gland") "UMLS:C0229560") AnnotationAssertion(Annotation( ) "glandula suprarenalis sinister") AnnotationAssertion( "left suprarenal gland") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001234") AnnotationAssertion(rdfs:label "left adrenal gland") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (adrenal cortex) AnnotationAssertion(Annotation( "ISBN:0-683-40008-8"^^xsd:string) Annotation( "MGI:llw2") Annotation( "MP:0008288") "The thick outer layer of the adrenal gland that produces and secretes steroid hormones such as corticosterone, estrone and aldosterone.") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001481") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0030223693 Liem KF, Bemis WE, Walker WF, Grande L, Functional Anatomy of the Vertebrates: An Evolutionary Perspective (2001) p.518 and Figure 15-9") "All craniates have groups of cells homologous to the mammalian adrenocortical and chromaffin tissues (medulla), but they are scattered in and near the kidneys in fishes. (...) The cortical and chromaffin tissues come together to form adrenal glands in tetrapods.[well established][VHOG]") AnnotationAssertion( "Kardong states that mammals are the first to have distinct cortext and medulla, but this contradicts XAO") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0011009") AnnotationAssertion( "BTO:0000045") AnnotationAssertion( "CALOHA:TS-0015") AnnotationAssertion( "EFO:0000237") AnnotationAssertion( "EMAPA:18427") AnnotationAssertion( "EV:0100136") AnnotationAssertion( "FMA:15632") AnnotationAssertion( "GAID:447") AnnotationAssertion( "MA:0000118") AnnotationAssertion( "MAT:0000494") AnnotationAssertion( "MESH:D000302") AnnotationAssertion( "NCIT:C12396") AnnotationAssertion(Annotation( "ncithesaurus:Adrenal_Cortex") "UMLS:C0001613") AnnotationAssertion( "VHOG:0001481") AnnotationAssertion( "XAO:0000165") AnnotationAssertion( "adrenal gland cortex") AnnotationAssertion( "cortex (glandula suprarenalis)") AnnotationAssertion( "cortex of adrenal gland") AnnotationAssertion( "cortex of suprarenal gland") AnnotationAssertion( "suprarenal cortex") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "cortex glandulae suprarenalis") AnnotationAssertion(Annotation( "BTO:0000045") "cortex glandulae suprarenalis") AnnotationAssertion( "suprarenal") AnnotationAssertion( "UBERON:0001235") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "adrenal cortex") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/5/5c/Gray1185.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (adrenal medulla) AnnotationAssertion(Annotation( "MESH:A06.407.071.265") Annotation( "MGI:llw2") Annotation( "MP:0008289") "The inner portion of the adrenal gland that consists mainly of chromaffin cells which produce, store and secrete neurotransmitters such as epinephrine and norepinephrine.") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001378") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0030223693 Liem KF, Bemis WE, Walker WF, Grande L, Functional Anatomy of the Vertebrates: An Evolutionary Perspective (2001) p.518 and Figure 15-9") "All craniates have groups of cells homologous to the mammalian adrenocortical and chromaffin tissues (medulla), but they are scattered in and near the kidneys in fishes. (...) The cortical and chromaffin tissues come together to form adrenal glands in tetrapods.[well established][VHOG]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0011010") AnnotationAssertion( "BTO:0000049") AnnotationAssertion( "CALOHA:TS-0018") AnnotationAssertion( "EFO:0000852") AnnotationAssertion( "EMAPA:18428") AnnotationAssertion( "EV:0100137") AnnotationAssertion( "FMA:15633") AnnotationAssertion( "GAID:451") AnnotationAssertion( "MA:0000119") AnnotationAssertion( "MAT:0000495") AnnotationAssertion( "MESH:D019439") AnnotationAssertion( "NCIT:C12397") AnnotationAssertion(Annotation( "ncithesaurus:Adrenal_Medulla") "UMLS:C0001629") AnnotationAssertion( "VHOG:0001378") AnnotationAssertion( "XAO:0000166") AnnotationAssertion( "adrenal gland medulla") AnnotationAssertion( "medulla (glandula suprarenalis)") AnnotationAssertion(Annotation( "FMA:15633") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "medulla glandulae suprarenalis") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "medulla of adrenal gland") AnnotationAssertion( "medulla of suprarenal gland") AnnotationAssertion( "suprarenal medulla") AnnotationAssertion( "uberon") AnnotationAssertion( "adrenal central medulla") AnnotationAssertion( "chromaffin cells") AnnotationAssertion(Annotation( "BTO:0000049") "medulla of glandula suprarenalis") AnnotationAssertion( "UBERON:0001236") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "adrenal medulla") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/5/5c/Gray1185.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "Wikipedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (paraaortic body) AnnotationAssertion(Annotation( ) "A chromaffin paraganglion located at the bifurcation of the aorta or at the origin of the inferior mesenteric artery.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:18223") AnnotationAssertion( "FMA:15647") AnnotationAssertion( "GAID:444") AnnotationAssertion( "MA:0001137") AnnotationAssertion( "MESH:D010220") AnnotationAssertion( "NCIT:C25316") AnnotationAssertion(Annotation( "ncithesaurus:Paraaortic") "UMLS:C0442134") AnnotationAssertion( "organ of Zuckerkandl") AnnotationAssertion(Annotation( "EMAPA:18223") "paraganglion of Zuckerkandl") AnnotationAssertion( "uberon") AnnotationAssertion( "para-aortic body") AnnotationAssertion(Annotation( ) "paraganglia of Zuckerkandl") AnnotationAssertion( "UBERON:0001237") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "The largest chromaffin paraganglia, and the largest source of circulating catecholamines in the fetus and young infants, and gradually atrophies to microscopic loci[WP]") AnnotationAssertion(rdfs:label "paraaortic body") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/a/af/Gray531.png"^^xsd:anyURI) SubClassOf( ) # Class: (lamina propria of small intestine) AnnotationAssertion(Annotation( "GOC:Obol") "Lamina propria that is part_of the small intestine.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:35779") AnnotationAssertion( "FMA:15651") AnnotationAssertion( "MA:0001554") AnnotationAssertion( "NCIT:C49297") AnnotationAssertion(Annotation( "ncithesaurus:Small_Intestinal_Lamina_Propria") "UMLS:C1711325") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "lamina propria mucosa of small bowel") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "lamina propria mucosa of small intestine") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "lamina propria mucosae of small bowel") AnnotationAssertion( "lamina propria mucosae of small intestine") AnnotationAssertion( "lamina propria of mucosa of small intestine") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "lamina propria of small bowel") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "small bowel lamina propria") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "small bowel lamina propria mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "small bowel lamina propria mucosae") AnnotationAssertion( "small intestine lamina propria") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "small intestine lamina propria mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "small intestine lamina propria mucosae") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001238") AnnotationAssertion(rdfs:label "lamina propria of small intestine") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (muscularis mucosae of large intestine) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A muscularis mucosa that is part of a large intestine.") AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37556") AnnotationAssertion( "FMA:15655") AnnotationAssertion( "MA:0002689") AnnotationAssertion( "NCIT:C32928") AnnotationAssertion(Annotation( "ncithesaurus:Large_Intestinal_Muscularis_Mucosa") "UMLS:C0734776") AnnotationAssertion(Annotation( "FMA:15655") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "lamina muscularis mucosae intestini crassi") AnnotationAssertion( "lamina muscularis of large intestine mucosa") AnnotationAssertion( "lamina muscularis of large intestine mucous membrane") AnnotationAssertion( "large intestine muscularis mucosa") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001239") AnnotationAssertion(rdfs:label "muscularis mucosae of large intestine") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (muscularis mucosae of intestine) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A muscularis mucosa that is part of a intestine.") AnnotationAssertion( "EMAPA:35442") AnnotationAssertion( "FMA:15691") AnnotationAssertion( "MA:0002694") AnnotationAssertion(Annotation( "MA:0002694") "intestine muscularis mucosa") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "EMAPA:35442") "intestinal muscularis mucosa") AnnotationAssertion( "UBERON:0001240") AnnotationAssertion(rdfs:label "muscularis mucosae of intestine") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (crypt of Lieberkuhn of small intestine) AnnotationAssertion(Annotation( "ISBN:0-683-40008-8"^^xsd:string) Annotation( "MP:0004841") "The tubular intestinal glands found in the mucosal membranes of the small intestine.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:35777") AnnotationAssertion( "FMA:15693") AnnotationAssertion( "MA:0001552") AnnotationAssertion( "NCIT:C33565") AnnotationAssertion(Annotation( "ncithesaurus:Small_Intestinal_Crypt_of_Lieberkuhn") "UMLS:C0227267") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "Lieberkühn crypt of small bowel") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "Lieberkühn crypt of small intestine") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "crypt of Lieberkuhn of small bowel") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "crypt of Lieberkuhn of small intestine") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "intestinal gland of small bowel") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "intestinal gland of small intestine") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "small bowel Lieberkühn crypt") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "small bowel crypt of Lieberkuhn") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "small bowel intestinal gland") AnnotationAssertion( "small intestinal crypt of Lieberkuhn") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "small intestine Lieberkühn crypt") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "small intestine crypt of Lieberkuhn") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "small intestine intestinal gland") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001241") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "crypt of Lieberkuhn of small intestine") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (intestinal mucosa) AnnotationAssertion(Annotation( "UBERON:cjm"^^xsd:string) "Mucosal layer that lines the intestine.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0000642") AnnotationAssertion( "EMAPA:35440") AnnotationAssertion( "FMA:15695") AnnotationAssertion( "GAID:296") AnnotationAssertion( "MA:0001537") AnnotationAssertion( "MESH:A03.492.411.369") AnnotationAssertion( "NCIT:C49241") AnnotationAssertion(Annotation( "ncithesaurus:Intestinal_Mucosa") "UMLS:C0021839") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bowel mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bowel mucosa of organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bowel mucous membrane") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bowel organ mucosa") AnnotationAssertion( "intestine mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "intestine mucosa of organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "intestine mucous membrane") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "intestine organ mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of bowel") AnnotationAssertion( "mucosa of intestine") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of organ of bowel") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of organ of intestine") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucous membrane of bowel") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucous membrane of intestine") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "organ mucosa of bowel") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "organ mucosa of intestine") AnnotationAssertion( "tunica mucosa intestini") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001242") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "intestinal mucosa") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (serosa of intestine) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A serous membrane that is part of a wall of intestine [Automatically generated definition].") AnnotationAssertion( "TODO - check serosa/peritoneum") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37619") AnnotationAssertion( "FMA:15701") AnnotationAssertion( "MA:0001538") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "anatomical wall of bowel serosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "anatomical wall of bowel serous membrane") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "anatomical wall of intestine serosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "anatomical wall of intestine serous membrane") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bowel anatomical wall serosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bowel anatomical wall serous membrane") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bowel wall serosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bowel wall serous membrane") AnnotationAssertion( "intestinal serosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "intestinal wall serosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "intestinal wall serous membrane") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "intestine anatomical wall serosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "intestine anatomical wall serous membrane") AnnotationAssertion( "intestine serosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "intestine wall serosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "intestine wall serous membrane") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "serosa of anatomical wall of bowel") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "serosa of anatomical wall of intestine") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "serosa of bowel anatomical wall") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "serosa of bowel wall") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "serosa of intestinal wall") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "serosa of intestine anatomical wall") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "serosa of intestine wall") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "serosa of wall of bowel") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "serosa of wall of intestine") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "serous membrane of anatomical wall of bowel") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "serous membrane of anatomical wall of intestine") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "serous membrane of bowel anatomical wall") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "serous membrane of bowel wall") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "serous membrane of intestinal wall") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "serous membrane of intestine anatomical wall") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "serous membrane of intestine wall") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "serous membrane of wall of bowel") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "serous membrane of wall of intestine") AnnotationAssertion( "visceral peritoneum of intestine") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "wall of bowel serosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "wall of bowel serous membrane") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "wall of intestine serosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "wall of intestine serous membrane") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001243") AnnotationAssertion(rdfs:label "serosa of intestine") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (internal anal sphincter) AnnotationAssertion(Annotation( "MGI:anna"^^xsd:string) Annotation( "MP:0009055") "The smooth muscle ring, formed by an increase of the circular muscle fibers of the rectum, situated at the upper end of the anal canal, internal to the outer voluntary external anal sphincter.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:18266") AnnotationAssertion( "FMA:15710") AnnotationAssertion( "MA:0001534") AnnotationAssertion( "NCIT:C32833") AnnotationAssertion(Annotation( "ncithesaurus:Internal_Anal_Sphincter") "UMLS:C0224394") AnnotationAssertion( "circular layer of anal muscularis externa") AnnotationAssertion( "circular layer of muscularis externa of anal canal") AnnotationAssertion( "circular layer of muscularis propria of anal canal") AnnotationAssertion( "circular muscle layer of anal canal") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001244") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "internal anal sphincter") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/e/e9/Gray1079.png"^^xsd:anyURI) SubClassOf(Annotation( "MA"^^xsd:string) ) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (anus) AnnotationAssertion(Annotation( ) Annotation( "ZFIN:curator"^^xsd:string) "Orifice at the opposite end of an animal's digestive tract from the mouth. Its function is to expel feces, unwanted semi-solid matter produced during digestion, which, depending on the type of animal, may be one or more of: matter which the animal cannot digest, such as bones; food material after all the nutrients have been extracted, for example cellulose or lignin; ingested matter which would be toxic if it remained in the digestive tract; and dead or excess gut bacteria and other endosymbionts.") AnnotationAssertion( "anal") AnnotationAssertion( "In the lungfish, sharks and rays the rectum opens into the cloaca which also receives wastes (urine) from the kidneys and material from the reproductive organs. In bony fish the rectum reaches the outside environment through the anus, which is normally situated just in front the urinary and reproductive openings. However in some fish the digestive tract may be curled back on itself, and in the Electric Eel (Electrophorus electricus) the anus is situated in the fish's throat. -- http://www.earthlife.net/fish/digestion.html") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0001680") AnnotationAssertion( "CALOHA:TS-2005") AnnotationAssertion( "EV:0100082") AnnotationAssertion( "FBbt:00003148") AnnotationAssertion( "FMA:15711") AnnotationAssertion( "GAID:312") AnnotationAssertion( "MA:0000331") AnnotationAssertion( "MESH:A03.492.411.495.767.288") AnnotationAssertion( "NCIT:C43362") AnnotationAssertion( "OpenCyc:Mx4rvVjaEZwpEbGdrcN5Y29ycA") AnnotationAssertion( "TADS:0000066") AnnotationAssertion( "TGMA:0001279") AnnotationAssertion(Annotation( "ncithesaurus:Anus") "UMLS:C0003461") AnnotationAssertion( "WBbt:0005364") AnnotationAssertion( "galen:Anus") AnnotationAssertion( "anal opening") AnnotationAssertion( "anal orifice") AnnotationAssertion( "opening of terminal part of digestive tract") AnnotationAssertion( "uberon") AnnotationAssertion( "proctodeum") AnnotationAssertion( "UBERON:0001245") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "anus") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/6/65/Protovsdeuterostomes.svg"^^xsd:anyURI) AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/7/75/Anorectum.gif"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (interlobular bile duct) AnnotationAssertion(Annotation( "MP:0009500") "The canals that carry bile in the liver between the intralobular ducts and the biliary ductules; interlobular bile ducts are part of the interlobular portal triad.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:15767") AnnotationAssertion( "MA:0002668") AnnotationAssertion( "NCIT:C32827") AnnotationAssertion(Annotation( "ncithesaurus:Interlobular_Bile_Duct") "UMLS:C0227515") AnnotationAssertion(Annotation( "MP:0009500") "interlobular ductule") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001246") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "interlobular bile duct") SubClassOf(Annotation( "FMA"^^xsd:string) Annotation( "MA-part-of") ) SubClassOf(Annotation( "FMA"^^xsd:string) Annotation( "MA"^^xsd:string) Annotation( "MP"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (falciform ligament) AnnotationAssertion(Annotation( ) "A ligament that attaches the liver to the anterior body wall. It is a broad and thin antero-posterior peritoneal fold, falciform in shape, its base being directed downward and backward and its apex upward and backward. It is a remnant of the ventral mesentery of the fetus. It is situated in an antero-posterior plane but lies obliquely, so that one surface faces forward and is in contact with the peritoneum behind the right rectus and the diaphragm, while the other is directed backward and is in contact with the left lobe of the liver. It is attached by its left margin to the under surface of the diaphragm and the posterior surface of the sheath of the right Rectus as low down as the umbilicus; by its right margin it extends from the notch on the anterior margin of the liver, as far back as the posterior surface. It is composed of two layers of peritoneum closely united together. Its base or free edge contains between its layers the round ligament and the paraumbilical veins[WP].") AnnotationAssertion(Annotation( "FMA"^^xsd:string) "in FMA this is a subclass of mesentery. In MA it is a subclass of ligament, we infer and assert this is a nonskeletal ligament") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0000499") AnnotationAssertion( "EHDAA:4856") AnnotationAssertion( "EMAPA:18288") AnnotationAssertion( "FMA:15823") AnnotationAssertion( "MA:0001622") AnnotationAssertion( "NCIT:C32582") AnnotationAssertion(Annotation( "ncithesaurus:Falciform_Ligament") "UMLS:C0230240") AnnotationAssertion( "VHOG:0000355") AnnotationAssertion( "falciform ligament of liver") AnnotationAssertion( "ligamentum falciforme (hepatis)") AnnotationAssertion(Annotation( "FMA:15823") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "ligamentum falciforme hepatis") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001247") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "falciform ligament") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "MA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (hilum of spleen) AnnotationAssertion(Annotation( ) "The splenic hilum is a location on the surface of the spleen. It is the point of attachment for the gastrosplenic ligament, and the point of insertion for the splenic artery and splenic vein. [WP,unvetted].") AnnotationAssertion(Annotation( "EMAPA:19303") "hilum") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:19303") AnnotationAssertion( "FMA:15841") AnnotationAssertion( "MA:0002670") AnnotationAssertion( "NCIT:C33601") AnnotationAssertion(Annotation( "ncithesaurus:Splenic_Hilum") "UMLS:C0229685") AnnotationAssertion(Annotation( "FMA:15841") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "hilum lienale") AnnotationAssertion(Annotation( "FMA:15841") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "hilum splenicum") AnnotationAssertion( "spleen hilum") AnnotationAssertion( "splenic hilum") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "hilum splenicum") AnnotationAssertion( "UBERON:0001248") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "hilum of spleen") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/a/a2/Gray1188.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (spleen lymphoid follicle) AnnotationAssertion(Annotation( ) Annotation( "CL:tm") Annotation( "MP:0008470") "The area of the white pulp where the affinity maturation of B cells and the generation of memory B cells and plasma cells occur.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "UBERON:0003969") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:35804") AnnotationAssertion( "MA:0002672") AnnotationAssertion( "NCIT:C33602") AnnotationAssertion(Annotation( "ncithesaurus:Splenic_Lymphoid_Follicle") "UMLS:C1519475") AnnotationAssertion(Annotation( "FMA:15843") "Malpighian body") AnnotationAssertion(Annotation( "FMA:15843") "lymphatic follicle of spleen") AnnotationAssertion(Annotation( "FMA:15843") "lymphoid follicle of spleen") AnnotationAssertion(Annotation( "FMA:15843") "lymphoid nodule of spleen") AnnotationAssertion(Annotation( "CL:tm") "spleen B cell follicle") AnnotationAssertion(Annotation( "MA:0002672") "spleen lymphoid follicle") AnnotationAssertion(Annotation( "CL:tm") "splenic B cell follicle") AnnotationAssertion(Annotation( "FMA:15843") "splenic lymphatic follicle") AnnotationAssertion( "splenic lymphoid follicle") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "MA:0002672") "spleen lymphoid nodule") AnnotationAssertion( "UBERON:0001249") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "spleen lymphoid follicle") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "CL:tm") Annotation( "MA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (red pulp of spleen) AnnotationAssertion(Annotation( "MGI:csmith"^^xsd:string) Annotation( "MP:0002356") "The parenchymatous tissue network of the spleen that consists of loose plates or cords (sinuses) infiltrated with red blood cells where most of the blood filtration occurs and degenerate erythrocytes are removed from the circulation.") AnnotationAssertion(Annotation( ) ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "CALOHA:TS-1263") AnnotationAssertion( "EMAPA:35806") AnnotationAssertion( "FMA:15844") AnnotationAssertion( "MA:0000756") AnnotationAssertion( "NCIT:C12992") AnnotationAssertion(Annotation( "ncithesaurus:Splenic_Red_Pulp") "UMLS:C0229687") AnnotationAssertion(Annotation( "FMA:15844") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "pulpa rubra") AnnotationAssertion( "red pulp") AnnotationAssertion( "spleen red pulp") AnnotationAssertion( "splenic red pulp") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "pulpa splenica") AnnotationAssertion( "UBERON:0001250") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "red pulp of spleen") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/1/15/Gray1191.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (marginal zone of spleen) AnnotationAssertion(Annotation( "ISBN:0-683-40008-8"^^xsd:string) Annotation( "MP:0002362") "The zone between the red and white pulp of the spleen containing numerous macrophages and lymphocytes, and a rich plexus of sinusoids supplied by white pulp arterioles carrying blood-borne antigens.") AnnotationAssertion(Annotation( "FMA"^^xsd:string) "WP says - (Some sources consider it to be the part of red pulp which borders on the white pulp, while other sources consider it to be neither red pulp nor white pulp.) - we use the adjacency relation here so it overlaps neither. FMA considers this an anatomical line.") AnnotationAssertion(Annotation( ) "marginal zone") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "CALOHA:TS-2395") AnnotationAssertion( "EMAPA:36650") AnnotationAssertion( "FMA:15852") AnnotationAssertion( "MA:0000755") AnnotationAssertion( "NCIT:C49767") AnnotationAssertion(Annotation( "ncithesaurus:Marginal_Zone") "UMLS:C1711368") AnnotationAssertion( "junctional zone of spleen") AnnotationAssertion(Annotation( "MA:0000755") "spleen marginal zone") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001251") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "marginal zone of spleen") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/1/15/Gray1191.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses( ) # Class: (adventitia of ureter) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An adventitia that is part of a ureter.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:28114") AnnotationAssertion( "FMA:15892") AnnotationAssertion( "MA:0002652") AnnotationAssertion( "external adventitia of ureter") AnnotationAssertion(Annotation( "FMA:15892") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "tunica adventitia (ureter)") AnnotationAssertion(Annotation( "FMA:15892") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "tunica adventitia ureteris") AnnotationAssertion( "ureter adventitia") AnnotationAssertion( "ureteral adventitia") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001252") AnnotationAssertion(rdfs:label "adventitia of ureter") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lamina propria of ureter) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A lamina propria that is part of a ureter [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:28841") AnnotationAssertion( "FMA:15896") AnnotationAssertion( "MA:0002653") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "lamina propria mucosa of ureter") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "lamina propria mucosae of ureter") AnnotationAssertion( "ureter lamina propria") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "ureter lamina propria mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "ureter lamina propria mucosae") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001253") AnnotationAssertion(rdfs:label "lamina propria of ureter") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (urothelium of ureter) AnnotationAssertion(Annotation( "MP:0000535") "The luminal epithelium of the tube that conducts the urine from the renal pelvis to the bladder[MP].") AnnotationAssertion(Annotation( "MP") "MP treats ureter urothelium and ureter luminal urothelium as exact synonyms, yes MA treats these as distinct; see also: transitional epithelium vs urothelium") AnnotationAssertion( "EMAPA:28089") AnnotationAssertion( "FMA:15897") AnnotationAssertion( "MA:0002655") AnnotationAssertion( "transitional epithelium of ureter") AnnotationAssertion( "ureter transitional epithelium") AnnotationAssertion( "ureter urothelium") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "MP:0000535") Annotation( ) "ureter luminal urothelium") AnnotationAssertion( "UBERON:0001254") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "urothelium of ureter") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (urinary bladder) AnnotationAssertion(Annotation( ) Annotation( "MGI:anna"^^xsd:string) "Distensible musculomembranous organ situated in the anterior part of the pelvic cavity in which urine collects before excretion[MP].") AnnotationAssertion(Annotation( "BGEE:Ann") Annotation( "GOTAX:0010073") Annotation( ) ) AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000740") Annotation( "VHOG"^^xsd:string) Annotation( ) "A saccular organ in which urine accumulates before discharge from the body. [Bemis_WE, Functional_Anatomy_of_the_Vertebrates:_An_Evolutionary_Perspective, Glossary_G-29, Grande_L, Liem_KF, Third_Edition_(2001)_Orlando_Fla.:_Harcourt_College_Publishers, Walker_WF][VHOG]") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0000623") Annotation( "AAO"^^xsd:string) Annotation( "AAO:BJB"^^xsd:string) "Anatomical structure which consists of a membranous sac used to temporarily store urine until it is excreted from the body.[AAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000740") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0072528305 Kardong KV, Vertebrates: Comparative Anatomy, Function, Evolution (2006) p.577-78") "In tetrapods, the urinary bladder arises as an outpocketing of the cloaca. (...) The tetrapod urinary bladder appears first among amphibians and is present in Sphenodon, turtles, most lizards, ostriches among birds, and all mammals.[well established][VHOG]") AnnotationAssertion( "vesical") AnnotationAssertion( "The urinary bladder evolved in tetrapods. Birds to not possess a true urinary bladder, although Palaeognathae have an undifferentiated cloacal outpocketing that serves a similar function[https://github.com/obophenotype/uberon/issues/454]") AnnotationAssertion(Annotation( "EHDAA2:0000174") "bladder") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0000623") AnnotationAssertion( "BTO:0001418") AnnotationAssertion( "CALOHA:TS-1090") AnnotationAssertion( "EFO:0000290") AnnotationAssertion( "EHDAA2:0000174") AnnotationAssertion( "EHDAA:9328") AnnotationAssertion( "EMAPA:18321") AnnotationAssertion( "EV:0100098") AnnotationAssertion( "FMA:15900") AnnotationAssertion( "GAID:0000004") AnnotationAssertion( "MA:0000380") AnnotationAssertion( "MAT:0000122") AnnotationAssertion( "MESH:A05.810.161") AnnotationAssertion( "MIAA:0000122") AnnotationAssertion( "NCIT:C12414") AnnotationAssertion( "OpenCyc:Mx4rvVjMmZwpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Bladder") "UMLS:C0005682") AnnotationAssertion( "VHOG:0000740") AnnotationAssertion( "XAO:0000154") AnnotationAssertion( "galen:UrinaryBladder") AnnotationAssertion(Annotation( ) Annotation( ) "vesica urinaria") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "urocyst") AnnotationAssertion(Annotation( "BTO:0001418") "vesica") AnnotationAssertion( "UBERON:0001255") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "urinary bladder") AnnotationAssertion( "Urinary:system.svg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "BTO"^^xsd:string) ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "upper part of UG sinus") ObjectSomeValuesFrom( )) # Class: (wall of urinary bladder) AnnotationAssertion(Annotation( ) "An anatomical wall that lines the insider of a urinary bladder.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0001462") AnnotationAssertion( "EMAPA:35175") AnnotationAssertion( "FMA:15902") AnnotationAssertion( "MA:0002493") AnnotationAssertion( "NCIT:C48941") AnnotationAssertion(Annotation( "ncithesaurus:Bladder_Wall") "UMLS:C0458421") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "anatomical wall of bladder") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "anatomical wall of urinary bladder") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bladder anatomical wall") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bladder wall") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "urinary bladder anatomical wall") AnnotationAssertion( "urinary bladder wall") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "wall of bladder") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001256") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "wall of urinary bladder") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (trigone of urinary bladder) AnnotationAssertion(Annotation( "MGI:anna"^^xsd:string) Annotation( "MP:0011768") "The smooth triangular region of the wall of the urinary bladder formed by the two ureteral orifices and the internal urethral orifice; it is an area in which the muscle fibers are closely adherent to the mucosa.") AnnotationAssertion( "The area is very sensitive to expansion and once stretched to a certain degree, the urinary bladder signals the brain of its need to empty. The signals become stronger as the bladder continues to fill.") AnnotationAssertion(Annotation( "WP"^^xsd:string) "Embryologically, the trigone of the bladder is derived from the caudal end of mesonephric ducts, which is of mesodermal origin (the rest of the bladder is endodermal). In the female the mesonephric ducts regresses, causing the trigone to be less prominent, but still present") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:35174") AnnotationAssertion( "FMA:15910") AnnotationAssertion( "MA:0002492") AnnotationAssertion( "NCIT:C12331") AnnotationAssertion(Annotation( "ncithesaurus:Bladder_Trigone") "UMLS:C0447586") AnnotationAssertion( "galen:TrigoneOfUrinaryBladder") AnnotationAssertion( "Lieutaud's trigone") AnnotationAssertion( "bladder trigone") AnnotationAssertion( "deep trigone") AnnotationAssertion(Annotation( "FMA:15910") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "musculus trigoni vesicae profundus") AnnotationAssertion( "trigone of bladder") AnnotationAssertion(Annotation( "FMA:15910") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "trigonum vesicae") AnnotationAssertion( "urinary bladder trigone") AnnotationAssertion( "vesical trigone") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "EMAPA:35174") "dorsal bladder neck") AnnotationAssertion(Annotation( ) Annotation( ) "trigonum vesicae urinariae") AnnotationAssertion( "UBERON:0001257") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "trigone of urinary bladder") AnnotationAssertion( "Illu:bladder.jpg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (neck of urinary bladder) AnnotationAssertion(Annotation( ) Annotation( "MP:anna"^^xsd:string) "The constricted portion of the urinary bladder, formed by the meeting of its inferolateral surfaces proximal to the opening of the urethra[MP].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:36078") AnnotationAssertion( "FMA:15912") AnnotationAssertion( "MA:0002491") AnnotationAssertion( "NCIT:C12336") AnnotationAssertion(Annotation( "ncithesaurus:Bladder_Neck") "UMLS:C0227716") AnnotationAssertion( "galen:UrinaryBladderNeck") AnnotationAssertion( "bladder neck") AnnotationAssertion(Annotation( "FMA:15912") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "cervix vesicae") AnnotationAssertion(Annotation( "FMA:15912") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "collum vesicae") AnnotationAssertion( "neck of bladder") AnnotationAssertion( "urinary bladder neck") AnnotationAssertion( "vesical neck") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "cervix vesicae urinariae") AnnotationAssertion( "UBERON:0001258") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "neck of urinary bladder") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/6/63/Gray1156.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (mucosa of urinary bladder) AnnotationAssertion(Annotation( "MGI:anna"^^xsd:string) Annotation( "MP:0011766") "The mucous membrane lining the urinary bladder.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EFO:0000293") AnnotationAssertion( "EMAPA:35897") AnnotationAssertion( "FMA:15928") AnnotationAssertion( "MA:0001692") AnnotationAssertion( "NCIT:C32205") AnnotationAssertion(Annotation( "ncithesaurus:Bladder_Mucosa") "UMLS:C0227691") AnnotationAssertion( "galen:MucousMembraneOfUrinaryBladder") AnnotationAssertion( "bladder mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bladder mucous membrane") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bladder organ mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of bladder") AnnotationAssertion( "mucous membrane of bladder") AnnotationAssertion( "mucous membrane of urinary bladder") AnnotationAssertion(Annotation( "FMA:15928") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "tunica mucosa (vesica urinaria)") AnnotationAssertion(Annotation( "FMA:15928") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "tunica mucosa vesicae") AnnotationAssertion(Annotation( "MP:MP"^^xsd:string) "tunica mucosa vesicae urinariae") AnnotationAssertion( "urinary bladder mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "urinary bladder mucous membrane") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001259") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "mucosa of urinary bladder") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (serosa of urinary bladder) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A serous membrane that is part of a urinary bladder [Automatically generated definition].") AnnotationAssertion( "TODO - check serosa/peritoneum") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:28661") AnnotationAssertion( "FMA:15932") AnnotationAssertion( "MA:0001696") AnnotationAssertion( "bladder serosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bladder serous membrane") AnnotationAssertion( "serosa of bladder") AnnotationAssertion( "serous coat of bladder") AnnotationAssertion( "serous coat of urinary bladder") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "serous membrane of bladder") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "serous membrane of urinary bladder") AnnotationAssertion(Annotation( "FMA:15932") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "tunica serosa (vesica urinaria)") AnnotationAssertion(Annotation( "FMA:15932") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "tunica serosa vesicae") AnnotationAssertion( "urinary bladder serosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "urinary bladder serous membrane") AnnotationAssertion( "visceral peritoneum of urinary bladder") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001260") AnnotationAssertion(rdfs:label "serosa of urinary bladder") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lamina propria of urinary bladder) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A lamina propria that is part of a urinary bladder [Automatically generated definition].") AnnotationAssertion( "Contains loose to dense connective tissue, variably sized blood vessels that may be close to epithelium, lymphatics, variable adipose tissue") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:30088") AnnotationAssertion( "FMA:15935") AnnotationAssertion( "MA:0001695") AnnotationAssertion( "NCIT:C48940") AnnotationAssertion(Annotation( "ncithesaurus:Bladder_Lamina_Propria") "UMLS:C1706967") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bladder lamina propria") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bladder lamina propria mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bladder lamina propria mucosae") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "lamina propria mucosa of bladder") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "lamina propria mucosa of urinary bladder") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "lamina propria mucosae of bladder") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "lamina propria mucosae of urinary bladder") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "lamina propria of bladder") AnnotationAssertion( "urinary bladder lamina propria") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "urinary bladder lamina propria mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "urinary bladder lamina propria mucosae") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001261") AnnotationAssertion(rdfs:label "lamina propria of urinary bladder") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (wall of intestine) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An anatomical wall that is part of a intestine [Automatically generated definition].") AnnotationAssertion( "we place two MA classes here due to the official ncit2ma mapping to intestinal wall tissue; not clear how bowel and intestine are different") AnnotationAssertion( ) AnnotationAssertion( "BTO:0000647") AnnotationAssertion( "EMAPA:35444") AnnotationAssertion( "FMA:15949") AnnotationAssertion( "MA:0001525") AnnotationAssertion( "MA:0002693") AnnotationAssertion( "NCIT:C49478") AnnotationAssertion(Annotation( "ncithesaurus:Intestinal_Wall_Tissue") "UMLS:C1708548") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "anatomical wall of bowel") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "anatomical wall of intestine") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bowel anatomical wall") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bowel wall") AnnotationAssertion( "intestinal wall") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "intestine anatomical wall") AnnotationAssertion( "intestine wall") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "wall of bowel") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "MA:0001525") "bowel wall") AnnotationAssertion( "UBERON:0001262") AnnotationAssertion(rdfs:label "wall of intestine") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pancreatic acinus) AnnotationAssertion(Annotation( "MP:0009145") "The secretory units of the exocrine pancreas, where fluid containing digestive enzymes is produced; consists of a group of secretory cells surrounding a luminal space that connects to the pancreatic duct.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:35651") AnnotationAssertion( "FMA:16011") AnnotationAssertion( "MA:0002417") AnnotationAssertion( "NCIT:C49268") AnnotationAssertion(Annotation( "ncithesaurus:Pancreatic_Acinus") "UMLS:C0227578") AnnotationAssertion(Annotation( "FMA:16011") Annotation( ) "acinus pancreaticus") AnnotationAssertion( "pancreas acinus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "TEMP:MP") "pancreatic acinar") AnnotationAssertion(Annotation( ) "pancreatic acini") AnnotationAssertion( "UBERON:0001263") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "pancreatic acinus") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pancreas) AnnotationAssertion(Annotation( "GO:0031016") "An endoderm derived structure that produces precursors of digestive enzymes and blood glucose regulating enzymes[GO].") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0010112") Annotation( "AAO"^^xsd:string) Annotation( "AAO:BJB"^^xsd:string) "Organ which secretes a fluid containing enzymes that aid in the digestion of food.[AAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000050") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "DOI:10.1016/j.crvi.2007.03.006 Madsen OD, Pancreas phylogeny and ontogeny in relation to a 'pancreatic stem cell'. C.R. Biologies (2007)") "In the hagfish and lampreys (our most primitive vertebrate species of today), the first sign of 'a new organ' is found as collections of endocrine cells around the area of the bile duct connection with the duodenum. These endocrine organs are composed of 99% beta cells and 1% somatostatin-producing delta cells. Compared to the more primitive protochordates (e.g. amphioxus), this represents a stage where all previously scattered insulin-producing cells of the intestinal tissue have now quantitatively migrated to found a new organ involved in sensing blood glucose rather than gut glucose. Only later in evolution, the beta cells are joined by exocrine tissue and alpha cells (exemplified by the rat-, rabbit- and elephant-fishes). Finally, from sharks and onwards in evolution, we have the islet PP-cell entering to complete the pancreas.[well established][VHOG]") AnnotationAssertion( "pancreatic") AnnotationAssertion(Annotation( ) "As a secretory organ serving exocrine and endocrine functions, the pancreas is specific to the vertebrates[PMID:16417468] Hagfishes and lampreys are unique in the complete separation of their endocrine pancreas (islet or- gan) and their exocrine pancreas (50). The endocrine and exocrine pancreas are coassociated in crown gnathostomes (50). In Branchiostoma and Ciona, there is no diverticulum as there is in hagfishes, lampreys, and gnathostomes, only dispersed insulin-secreting cells in the walls of the gastrointestinal tract (51, 52)") AnnotationAssertion( "The zebrafish does not have a discrete pancreas. Exocrine pancreatic tissue can be found scattered along the intestinal tract. The acinar structure of the exocrine pancreas is very similar to that of mammals and comprises cells with a very dark, basophilic cytoplasm") AnnotationAssertion(Annotation( ) "The mature pancreas of higher vertebrates and mammals comprises two major functional units: the exocrine pancreas, which is responsible for the production of digestive enzymes to be secreted into the gut lumen, and the endocrine pancreas, which has its role in the synthesis of several hormones with key regulatory functions in food uptake and metabolism. The exocrine portion constitutes the majority of the mass of the pancreas, and contains only two different cell types, the secretory acinar cells and the ductular cells. The endocrine portion, which comprises only 1-2% of the total mass, contains five different cell types, which are organized into mixed functional assemblies referred to as the islets of Langerhans") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010112") AnnotationAssertion( "BTO:0000988") AnnotationAssertion( "CALOHA:TS-0736") AnnotationAssertion( "EFO:0000855") AnnotationAssertion( "EHDAA2:0001367") AnnotationAssertion( "EHDAA:6893") AnnotationAssertion( "EMAPA:17503") AnnotationAssertion( "EV:0100092") AnnotationAssertion( "FMA:7198") AnnotationAssertion( "GAID:334") AnnotationAssertion( "MA:0000120") AnnotationAssertion( "MAT:0000075") AnnotationAssertion( "MESH:D010179") AnnotationAssertion( "MIAA:0000075") AnnotationAssertion( "NCIT:C12393") AnnotationAssertion( "OpenCyc:Mx4rvVimZZwpEbGdrcN5Y29ycA") AnnotationAssertion( "TAO:0000140") AnnotationAssertion(Annotation( "ncithesaurus:Pancreas") "UMLS:C0030274") AnnotationAssertion( "VHOG:0000050") AnnotationAssertion( "XAO:0000136") AnnotationAssertion( "ZFA:0000140") AnnotationAssertion( "galen:Pancreas") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001264") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "pancreas") AnnotationAssertion( "https://upload.wikimedia.org/wikipedia/commons/7/7e/Blausen_0699_PancreasAnatomy2.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "Wikipedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "Wikipedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (trabecula of spleen) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A trabecula that is part of a spleen.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:35808") AnnotationAssertion( "FMA:16027") AnnotationAssertion( "MA:0000758") AnnotationAssertion( "NCIT:C33607") AnnotationAssertion(Annotation( "ncithesaurus:Splenic_Trabecula") "UMLS:C0229688") AnnotationAssertion( "spleen trabeculum") AnnotationAssertion( "splenic trabecula") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001265") AnnotationAssertion(rdfs:label "trabecula of spleen") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (splenic cord) AnnotationAssertion(Annotation( ) "A structure found in the red pulp of the spleen between the sinusoids, consisting of fibrils and connective tissue cells with a large population of monocytes and macrophages. These cords contain half of the human body's monocytes as a reserve so that after tissue injury these monocytes can move in and aid locally sourced monocytes in wound healing. Erythrocytes pass through the cords of Billroth before entering the sinusoids. The passage into the sinusoids may be seen as a bottleneck, where erythrocytes need to be flexible in order to pass through. In disorders of erythrocyte shape and/or flexibility, such as hereditary spherocytosis, erythrocytes fail to pass through and get phagocytosed, causing extravascular hemolysis.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37752") AnnotationAssertion( "FMA:16031") AnnotationAssertion( "MA:0002671") AnnotationAssertion( "NCIT:C33599") AnnotationAssertion(Annotation( "ncithesaurus:Splenic_Cord") "UMLS:C0735011") AnnotationAssertion(Annotation( ) "cord of Billroth") AnnotationAssertion(Annotation( "FMA:16031") "cord of Bilroth") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001266") AnnotationAssertion(rdfs:label "splenic cord") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "MA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (femoral nerve) AnnotationAssertion(Annotation( ) "The femoral nerve, the largest branch of the lumbar plexus, arises from the ventral divisions of the second, third, and fourth lumbar nerves. It descends through the fibers of the Psoas major, emerging from the muscle at the lower part of its lateral border, and passes down between it and the Iliacus, behind the iliac fascia; it then runs beneath the inguinal ligament, into the thigh, and splits into an anterior and a posterior division. Under the inguinal ligament, it is separated from the femoral artery by a portion of the Psoas major. [WP,unvetted].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0000507") AnnotationAssertion( "EHDAA:5655") AnnotationAssertion( "EMAPA:35343") AnnotationAssertion( "FMA:16486") AnnotationAssertion( "GAID:850") AnnotationAssertion( "MA:0001167") AnnotationAssertion( "MESH:D005267") AnnotationAssertion( "NCIT:C52816") AnnotationAssertion( "OpenCyc:Mx4rwGC03JwpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Femoral_Nerve") "UMLS:C0015808") AnnotationAssertion( "VHOG:0001411") AnnotationAssertion( "anterior crural nerve") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "nervus femoralis") AnnotationAssertion( "UBERON:0001267") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "femoral nerve") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/7/7c/Gray823.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (peritoneal fluid) AnnotationAssertion(Annotation( "FMA:16515") "Transudate contained in the peritoneal cavity.") AnnotationAssertion( ) AnnotationAssertion( "BTO:0001031") AnnotationAssertion( "EMAPA:35683") AnnotationAssertion( "FMA:16515") AnnotationAssertion( "MA:0002531") AnnotationAssertion( "ncithesaurus:Peritoneal_Fluid") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001268") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "peritoneal fluid") SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (acetabular part of hip bone) AnnotationAssertion(Annotation( ) "The acetabulum is a concave surface of the pelvis. The head of the femur meets with the pelvis at the acetabulum, forming the hip joint. There are three bones of the os coxae (hip bone) that come together to form the acetabulum. Contributing a little more than two-fifths of the structure is the ischium, which provides lower and side boundaries to the acetabulum. The ilium forms the upper boundary, providing a little less than two-fifths of the structure of the acetabulum. The rest is formed by the pubis, near the midline. It is bounded by a prominent uneven rim, which is thick and strong above, and serves for the attachment of the acetabular labrum, which reduces its opening, and deepens the surface for formation of the hip joint. At the lower part of the acetabulum is the acetabular notch, which is continuous with a circular depression, the acetabular fossa, at the bottom of the cavity of the acetabulum. The rest of the acetabulum is formed by a curved, crescent-moon shaped surface, the lunate surface, where the joint is made with the head of the femur. Its counterpart in the pectoral girdle is the glenoid fossa.[WP,unvetted].") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0000770") Annotation( "AAO"^^xsd:string) Annotation( "AAO:LAP"^^xsd:string) "Cavity for the articulation of the proximal bone of the hind limb.[AAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000974") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "DOI:10.1038/nature04119 Boisvert CA, The pelvic fin and girdle of Panderichthys and the origin of tetrapod locomotion. Nature (2005)") "During the transformation from the osteolepiform fins to tetrapod limbs, the appendages and girdles underwent a number of radical changes. The pelvic girdle became a weight-bearing structure by evolution of an ischium, a full mesio-ventral contact between the two sides of the girdle, an ilium, and a contact between the vertebral column and the girdle through a sacral rib. Fore- and hindlimbs shifted laterally by reorientation of the glenoid and the acetabulum.[well established][VHOG]") AnnotationAssertion(Annotation( "WP"^^xsd:string) "In reptiles and in birds, the acetabula are deep sockets.") AnnotationAssertion(Annotation( "MA"^^xsd:string) "whilst WP defines this as a surface, MA treats it as a bone. There are other FMA classes that may be better suited to representing the surface.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0000770") AnnotationAssertion( "EHDAA:10661") AnnotationAssertion( "EMAPA:18346") AnnotationAssertion( "FMA:16579") AnnotationAssertion( "GAID:206") AnnotationAssertion( "MA:0001335") AnnotationAssertion( "MESH:A02.835.232.611.108") AnnotationAssertion( "NCIT:C32042") AnnotationAssertion( "OpenCyc:Mx4rwJlP9ZwpEbGdrcN5Y29ycA") AnnotationAssertion( "RETIRED_EHDAA2:0001427") AnnotationAssertion(Annotation( "ncithesaurus:Acetabulum") "UMLS:C0000962") AnnotationAssertion( "VHOG:0000974") AnnotationAssertion(Annotation( "VHOG:0000974") "acetabular region") AnnotationAssertion(Annotation( "MA:0001335") "acetabulum") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001269") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "acetabular part of hip bone") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/2/29/Illu_pelvic_girdle.jpg"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf(Annotation( "Phenoscape") ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (bony pelvis) AnnotationAssertion(Annotation( ) "A ring of bone formed by the sacrum and the first few coccygeal vertebrae as the roof, the pubis and ischia as the floor and the ilia and the acetabular part of the ischia as the walls.") AnnotationAssertion( "TODO add taxon-specific part of relations connecting sub-structures to this.") AnnotationAssertion(Annotation( "FMA"^^xsd:string) "in FMA, this is part of the axial skeletal system") AnnotationAssertion( ) AnnotationAssertion( "FMA:16580") AnnotationAssertion( "pelvis ossea") AnnotationAssertion(Annotation( "FMA:16580") "skeletal system of pelvis") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001270") AnnotationAssertion(rdfs:label "bony pelvis") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses( ) # Class: (pelvic girdle region) AnnotationAssertion(Annotation( ) Annotation( ) Annotation( ) Annotation( "FMA:16581") Annotation( "FMA:23217") Annotation( "UBERONREF:0000003"^^xsd:string) "The organism subdivision that includes the pelvic girdle skeleton and associated soft tissue. Note that this includes both the skeletal elements and associated tissues (integument, muscle, etc). Examples: There are only two instances in an organism, right and left pectoral girdle regions.") AnnotationAssertion( "this class describes the subdivision of the limb/fin, NOT the skeleton within. See also: skeleton of pectoral girdle (UBERON:0007831). See also comments on obo-anatomy mail list. Note that even though the class includes soft tissue it is more restrictive than 'pelvis' which also includes structures in cavities etc. TODO this needs to be better documented") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "VSAO:0000304") Annotation( "VSAO"^^xsd:string) Annotation( ) "Subdivision of lower limb or fin which links the limb/fin to the body[FMA,modified]. There is only one instance of the pelvic girdle region per organism.[VSAO]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37862") AnnotationAssertion( "FMA:16581") AnnotationAssertion( "NCIT:C33291") AnnotationAssertion(Annotation( "ncithesaurus:Pelvic_Girdle") "UMLS:C0684083") AnnotationAssertion( "VSAO:0000304") AnnotationAssertion( "uberon") AnnotationAssertion( "girdle - pelvic") AnnotationAssertion(Annotation( ) "pelvic girdle") AnnotationAssertion( "UBERON:0001271") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "pelvic girdle region") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses( ) # Class: (innominate bone) AnnotationAssertion(Annotation( ) Annotation( ) Annotation( ) "A fused bone consisting of the ilium, ischium and and pubis. Together with the sacrum and coccyx, it comprises the pelvis. [WP,modified].") AnnotationAssertion( "currently this class is restricted to exclude the teleost bone as the definition mentions ilium, ischium and pubis. In future we may add a grouping class for girdle bones that supports the appendage") AnnotationAssertion(Annotation( "WP"^^xsd:string) "The hip/pelvic bone/basipterygium first appears in fishes, where it consists of a simple, usually triangular bone, to which the pelvic fin articulates. The hip bones on each side usually connect with each other at the forward end, and are even solidly fused in lungfishes and sharks, but they never attach to the vertebral column") AnnotationAssertion(Annotation( "FMA"^^xsd:string) "in FMA this is a paired structure. NCITA has 'pelvic bone' but this is the *superclass* of ilium/ischium/pubis. The MA class 'pelvis bone' is actually a superclass of 'pelvic girdle bone' and caudal/sacral vertebra.") AnnotationAssertion(Annotation( "FMA:16585") "bone of pelvic girdle") AnnotationAssertion( "innominate") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:16585") AnnotationAssertion( "GAID:205") AnnotationAssertion( "MESH:A02.835.232.611") AnnotationAssertion(Annotation( "FMA:16585") "coxal bone") AnnotationAssertion(Annotation( "FMA:16585") "hip bone") AnnotationAssertion(Annotation( "FMA:16585") "innominate bone") AnnotationAssertion(Annotation( ) "os coxa") AnnotationAssertion(Annotation( "FMA:16585") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "os coxae") AnnotationAssertion(Annotation( "FMA:16585") "pelvic bone") AnnotationAssertion( "uberon") AnnotationAssertion( "basipterygium") AnnotationAssertion(Annotation( ) Annotation( ) "os innominatum") AnnotationAssertion( "UBERON:0001272") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "innominate bone") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/8/8b/Gray341.png"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (ilium) AnnotationAssertion(Annotation( ) Annotation( ) Annotation( "PHENOSCAPE:ad"^^xsd:string) "Paired endochondral bone that is the dorsal-most of the pelvic bones, offering attachment areas for gluteal muscles on its main surface [PHENOSCAPE:ad].") AnnotationAssertion(Annotation( "Wikipedia"^^xsd:string) ) AnnotationAssertion(Annotation( "Wikipedia"^^xsd:string) ) AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0000772") Annotation( "AAO"^^xsd:string) Annotation( "AAO:LAP"^^xsd:string) "Paired, rodlike endochondral bones that constitute the anterior pelvic girdle.[AAO]") AnnotationAssertion( "iliac") AnnotationAssertion(Annotation( "WP"^^xsd:string) "All reptiles have an ilium except snakes, although some snake species have a tiny bone which is considered to be an ilium") AnnotationAssertion(Annotation( "MA"^^xsd:string) "this is_a hip bone in MA.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0000772") AnnotationAssertion( "CALOHA:TS-2200") AnnotationAssertion( "EFO:0003049") AnnotationAssertion( "EMAPA:18726") AnnotationAssertion( "FMA:16589") AnnotationAssertion( "GAID:207") AnnotationAssertion( "MA:0001336") AnnotationAssertion( "MESH:A02.835.232.611.434") AnnotationAssertion( "NCIT:C32765") AnnotationAssertion( "OpenCyc:Mx4rvhwFJ5wpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Ilium") "UMLS:C0020889") AnnotationAssertion( "galen:Ilium") AnnotationAssertion(Annotation( "EMAPA:18726") "iliac bone") AnnotationAssertion( "ilium bone") AnnotationAssertion( "os iliacum") AnnotationAssertion( "os ilii") AnnotationAssertion(Annotation( "FMA:16589") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "os ilium") AnnotationAssertion( "uberon") AnnotationAssertion( "illium") AnnotationAssertion( "UBERON:0001273") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "ilium") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "cjm"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (ischium) AnnotationAssertion(Annotation( ) Annotation( "VSAO:0005006") Annotation( "VSAO:NI"^^xsd:string) "Endochondral bone that is paired, forming the posterior part of the pelvis, articulating with the pubis and ilium.") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0000860") Annotation( "AAO"^^xsd:string) Annotation( "AAO:LAP"^^xsd:string) "Paired bones of endochondral origin that constitute the posterior elements of the pelvic girdle. They are synostotically fused to each other and form the posterior part of the acetabulum.[AAO]") AnnotationAssertion( "ischial") AnnotationAssertion(Annotation( "MA"^^xsd:string) "this is_a hip bone in MA; in FMA it is a zone of bone organ.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0000860") AnnotationAssertion( "EMAPA:18727") AnnotationAssertion( "FMA:16592") AnnotationAssertion( "GAID:208") AnnotationAssertion( "MA:0001337") AnnotationAssertion( "MESH:A02.835.232.611.548") AnnotationAssertion( "NCIT:C32884") AnnotationAssertion( "OpenCyc:Mx4rvlzMKpwpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Ischium") "UMLS:C0022122") AnnotationAssertion( "VSAO:0005006") AnnotationAssertion( "galen:Ischium") AnnotationAssertion(Annotation( "EMAPA:18727") "ischial bone") AnnotationAssertion( "ischium bone") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "os ischii") AnnotationAssertion(Annotation( "AAO:0000860") "os ischii") AnnotationAssertion( "UBERON:0001274") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "ischium") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/2/29/Illu_pelvic_girdle.jpg"^^xsd:anyURI) SubClassOf(Annotation( "VSAO"^^xsd:string) ) SubClassOf(Annotation( "MA"^^xsd:string) ) SubClassOf(Annotation( "MA"^^xsd:string) ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "cjm"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pubis) AnnotationAssertion(Annotation( ) Annotation( "PHENOSCAPE:ad"^^xsd:string) "A paired endochondral bone making up the anteroventral region of the tripartite pelvic girdle forming part of the ventral edge of the acetabulum. The origin site of many proximal hindlimb muscles. [PHENOSCAPE:ad].") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0000861") Annotation( "AAO"^^xsd:string) Annotation( "AAO:LAP"^^xsd:string) "Paired, cartilaginous (ocassionally calcified) elements that form the ventral portion of the pelvic girdle. Each is located ventral to the acetabulum between the anteroventral margin of the ischium and the posteroventral margin of the illium. When the element calcifies or ossifies, its articulation with adjacent elements is difficult to distinguish. Both pubes are synchondrotically fused to one another.[AAO]") AnnotationAssertion(Annotation( "FMA"^^xsd:string) "isa bone zone in FMA") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0000861") AnnotationAssertion( "EMAPA:18728") AnnotationAssertion( "FMA:16595") AnnotationAssertion( "MA:0001338") AnnotationAssertion( "MESH:A02.835.232.611.781") AnnotationAssertion( "NCIT:C33423") AnnotationAssertion(Annotation( "ncithesaurus:Pubic_Bone") "UMLS:C0034014") AnnotationAssertion( "galen:Pubis") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "os pubis") AnnotationAssertion(Annotation( ) "pubic bone") AnnotationAssertion(Annotation( ) "pubis bone") AnnotationAssertion( "UBERON:0001275") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "pubis") SubClassOf(Annotation( "VSAO"^^xsd:string) ) SubClassOf(Annotation( "MA"^^xsd:string) ) SubClassOf(Annotation( "MA"^^xsd:string) ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (epithelium of stomach) AnnotationAssertion(Annotation( "MP:0000471") "The epithelial layer of the stomach .") AnnotationAssertion(Annotation( "FMA"^^xsd:string) "in FMA this is classified as simple columnar, MA divides this into squamous and glandular") AnnotationAssertion( ) AnnotationAssertion( "BTO:0000500") AnnotationAssertion( "CALOHA:TS-2068") AnnotationAssertion( "EHDAA2:0001918") AnnotationAssertion( "EMAPA:17023") AnnotationAssertion( "FMA:17091") AnnotationAssertion( "MA:0001610") AnnotationAssertion( "VHOG:0001433") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelial tissue of stomach") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelial tissue of ventriculus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelium of ventriculus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "stomach epithelial tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "stomach epithelium") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "ventriculus epithelial tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "ventriculus epithelium") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0000500") "gastric epithelium") AnnotationAssertion( "UBERON:0001276") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "epithelium of stomach") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (intestinal epithelium) AnnotationAssertion(Annotation( "UBERON:cjm"^^xsd:string) "Epithelial layer that lines the intestine.") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0005124") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "Simple columnar epithelium that lines the intestine, sometimes pseudostratified, with absorptive brush-border cells and mucous goblet cells clearly visible. Crosnier et al. 2005[TAO]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0000781") AnnotationAssertion( "EMAPA:32873") AnnotationAssertion( "FMA:17229") AnnotationAssertion( "MA:0001536") AnnotationAssertion( "NCIT:C49240") AnnotationAssertion( "TAO:0005124") AnnotationAssertion(Annotation( "ncithesaurus:Intestinal_Epithelium") "UMLS:C0226890") AnnotationAssertion( "ZFA:0005124") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bowel epithelial tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bowel epithelium") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelial tissue of bowel") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelial tissue of intestine") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelium of bowel") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelium of intestine") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "intestine epithelial tissue") AnnotationAssertion(Annotation( "ZFA:0005124") "villous epithelium") AnnotationAssertion( "uberon") AnnotationAssertion( "intestine epithelium") AnnotationAssertion( "UBERON:0001277") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "intestinal epithelium") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (epithelium of large intestine) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An epithelium that is part of a large intestine [Automatically generated definition].") AnnotationAssertion( "CALOHA:TS-2105") AnnotationAssertion( "EMAPA:35466") AnnotationAssertion( "FMA:17301") AnnotationAssertion( "MA:0001545") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelial tissue of large intestine") AnnotationAssertion( "large intestinal epithelium") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "large intestine epithelial tissue") AnnotationAssertion( "large intestine epithelium") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001278") AnnotationAssertion(rdfs:label "epithelium of large intestine") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (portal triad) AnnotationAssertion(Annotation( ) Annotation( "ISBN:0-683-40008-8"^^xsd:string) Annotation( "MGI:csmith"^^xsd:string) Annotation( "MP:0008993") "A multi-organ-part structure that consists of three vessels of the portal lobule including the bile duct, a terminal branch of the hepatic artery and portal vein, and may also include a lymphatic vessel.") AnnotationAssertion( "The misnomer 'portal triad' traditionally has included only the first three structures, and was named before lymphatic vessels were discovered in the structure. It can refer both to the largest branch of each of these vessels running inside the hepatoduodenal ligament, and to the smaller branches of these vessels inside the liver.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:17523") AnnotationAssertion( "MA:0002499") AnnotationAssertion( "NCIT:C33342") AnnotationAssertion(Annotation( "ncithesaurus:Portal_Triad") "UMLS:C0227514") AnnotationAssertion( "trias hepatica") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "trias hepatica") AnnotationAssertion( "UBERON:0001279") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "portal triad") AnnotationAssertion( "Portal:triad.JPG"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (liver parenchyma) AnnotationAssertion(Annotation( "MP:0008986") "The functional units of the liver including the lobules.") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000539") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "DOI:10.1002/ar.20524 Hardman RC, Volz DC, Kullman SW, Hinton DE, An in vivo look at vertebrate liver architecture: three-dimensional reconstruction from Medaka (Oryzias latipes). The Anatomical Record (2007)") "the (liver) tubular structure (dual layered parenchyma) appears to be conserved among all embryonic vertebrates (...) it is not unlikely that all vertebrate livers share the same fundamental functional unit.[well established][VHOG]") AnnotationAssertion( "UBERON:0003223") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010405") AnnotationAssertion( "EHDAA2:0001004") AnnotationAssertion( "EHDAA:2201") AnnotationAssertion( "EMAPA:17203") AnnotationAssertion( "FMA:17540") AnnotationAssertion( "MA:0000366") AnnotationAssertion( "NCIT:C32735") AnnotationAssertion( "VHOG:0000539") AnnotationAssertion( "XAO:0000454") AnnotationAssertion(Annotation( "FMA:17540") "hepatic parenchyma") AnnotationAssertion(Annotation( "XAO:0000454") "liver parenchyme") AnnotationAssertion(Annotation( "FMA:17540") "parenchyma of liver") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "VHOG:0000539") "hepatic parenchyme") AnnotationAssertion( "UBERON:0001280") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "liver parenchyma") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "XAO"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (hepatic sinusoid) AnnotationAssertion(Annotation( ) Annotation( "ZFIN:curator"^^xsd:string) "Wide thin-walled blood vessels in the liver. In mammals they have neither veinous or arterial markers.") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000708") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "DOI:10.1053/ax.2000.7133 Crawshaw GJ, Weinkle TK, Clinical and pathological aspects of the amphibian liver. Seminars in Avian and Exotic Pet Medicine (2000)") "(...) the amphibian liver has characteristics in common with both fish and terrestrial vertebrates. (...) The histological structure of the liver is similar to that in other vertebrates, with hepatocytes arranged in clusters and cords separated by a meshwork of sinusoids and the presence of the traditional triad of portal venule, hepatic arteriole, and bile duct.[well established][VHOG]") AnnotationAssertion( "UBERON:0003275") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0000999") AnnotationAssertion( "EMAPA:17365") AnnotationAssertion( "FMA:17543") AnnotationAssertion( "MA:0000367") AnnotationAssertion( "NCIT:C32733") AnnotationAssertion( "TAO:0005091") AnnotationAssertion(Annotation( "ncithesaurus:Hepatic_Sinusoid") "UMLS:C0227523") AnnotationAssertion( "VHOG:0000708") AnnotationAssertion( "ZFA:0005091") AnnotationAssertion(Annotation( "EHDAA2:0000999") "liver hepatic sinusoids") AnnotationAssertion( "liver sinusoid") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "liver sinusoidal blood vessel") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "sinusoid of liver") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "sinusoidal blood vessel of liver") AnnotationAssertion( "vas capillare sinusoideum") AnnotationAssertion(Annotation( ) Annotation( ) "vas sinusoideum") AnnotationAssertion( "uberon") AnnotationAssertion( "hepatic sinusoids") AnnotationAssertion( "UBERON:0001281") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "hepatic sinusoid") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (intralobular bile duct) AnnotationAssertion(Annotation( "MGI:csmith"^^xsd:string) Annotation( "MP:0009499") "The tubules located between the bile canaliculi and interlobular bile ducts near the outer edge of a classic liver lobule.") AnnotationAssertion( "Note that this is part of the intrahepatic bile duct in MA, as this class is more alike the tree in FMA. Note also that SCT has canal of Hering and Entire IBduct as the only sibling terms under 'Structure of intralobular bile duct' (i.e. the CoH is the only part of the entire IBduct)") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:17545") AnnotationAssertion( "MA:0002669") AnnotationAssertion( "NCIT:C32255") AnnotationAssertion(Annotation( "ncithesaurus:Canal_of_Hering") "UMLS:C0227517") AnnotationAssertion(Annotation( "FMA:17545") "canal of Herring") AnnotationAssertion(Annotation( "FMA:17545") "cholangiole") AnnotationAssertion(Annotation( "FMA:17545") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "ductus interlobularis bilifer") AnnotationAssertion( "uberon") AnnotationAssertion( "canal of Hering") AnnotationAssertion(Annotation( ) Annotation( ) "canals of Hering") AnnotationAssertion(Annotation( ) "duct of Herring") AnnotationAssertion(Annotation( ) "intrahepatic bile ductule") AnnotationAssertion( "UBERON:0001282") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "intralobular bile duct") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (bile canaliculus) AnnotationAssertion(Annotation( "MP:0008991") "An intercellular channel that takes up bile from hepatocytes, transporting it to the bile ducts.") AnnotationAssertion( "conducts the flow of bile countercurrent to the direction of portal blood flow and connects with the canal of Hering[DOI:10.1002/cphy.c120027]") AnnotationAssertion( "The bile canaliculi merge and form bile ductules, which eventually become common hepatic duct. Hepatocytes are polyhedral in shape, therefore having no set shape or design. They have surfaces facing the sinusoids, (called sinusoidal faces) and surfaces which contact other hepatocytes, (called lateral faces). Bile canaliculi are formed by grooves on some of the lateral faces of these hepatocytes. Microvilli are present in the canaliculi but are sparse. [WP]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0002841") AnnotationAssertion( "EMAPA:36534") AnnotationAssertion( "FMA:17547") AnnotationAssertion( "MA:0002495") AnnotationAssertion( "MESH:D001648") AnnotationAssertion( "NCIT:C32202") AnnotationAssertion( "TAO:0005163") AnnotationAssertion(Annotation( "ncithesaurus:Bile_Canaliculus") "UMLS:C0005393") AnnotationAssertion( "ZFA:0005163") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "bile canaliculi") AnnotationAssertion(Annotation( "BTO:0002841") "bile capillary") AnnotationAssertion(Annotation( "BTO:0002841") "biliary canaliculus") AnnotationAssertion( "UBERON:0001283") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "bile canaliculus") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/d/d9/Gray1094.png"^^xsd:anyURI) SubClassOf(Annotation( "FMA"^^xsd:string) Annotation( "ZFA"^^xsd:string) ) SubClassOf(Annotation( "BTO"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (renal column) AnnotationAssertion(Annotation( ) "A column of tissue that is histologically identical to tissue found in the renal cortex, but which is located in the medulla between the renal pyramids.") AnnotationAssertion( "Check part_of location against textual definition") AnnotationAssertion(Annotation( "ncithesaurus:Cortical_Column") "cortical column") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37487") AnnotationAssertion( "FMA:17633") AnnotationAssertion( "MA:0001651") AnnotationAssertion( "NCIT:C32387") AnnotationAssertion( "column of Bertini") AnnotationAssertion(Annotation( "FMA:17633") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "columna Bertini") AnnotationAssertion(Annotation( "MA:0001651") "kidney column") AnnotationAssertion( "renal column of Bertini") AnnotationAssertion( "renal cortical column") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:17633") "Bertin's column") AnnotationAssertion(Annotation( "FMA:17633") "column of Bertin") AnnotationAssertion(Annotation( ) Annotation( ) "columnae renales") AnnotationAssertion( "UBERON:0001284") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "renal column") AnnotationAssertion( "Illu:kidney2.jpg"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) Annotation( "MA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (nephron) AnnotationAssertion(Annotation( ) Annotation( ) "The basic functional unit of the kidney. its chief function is to regulate the concentration of water and soluble substances like sodium salts by filtering the blood, reabsorbing what is needed and excreting the rest as urine. A nephron eliminates wastes from the body, regulates blood volume and blood pressure, controls levels of electrolytes and metabolites, and regulates blood pH. Its functions are vital to life and are regulated by the endocrine system by hormones such as antidiuretic hormone, aldosterone, and parathyroid hormone.[WP].") AnnotationAssertion( "kidney terms require review for cross-vertebrate compatibility and developmental relationships.") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0002153") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "Functional unit of the kidney that filters waste.[TAO]") AnnotationAssertion(Annotation( "GO"^^xsd:string) "In the avian kidney, three types of nephron are identified: mammalian-type nephrons with long and short loops of Henle, and reptilian type nephrons (Gambaryan, 1992)") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0000924") AnnotationAssertion( "CALOHA:TS-1312") AnnotationAssertion( "EMAPA:28491") AnnotationAssertion( "EMAPA:35592") AnnotationAssertion( "EV:0100384") AnnotationAssertion( "FMA:17640") AnnotationAssertion( "GAID:428") AnnotationAssertion( "MA:0000375") AnnotationAssertion( "MESH:D009399") AnnotationAssertion( "NCIT:C13048") AnnotationAssertion( "TAO:0002153") AnnotationAssertion(Annotation( "ncithesaurus:Nephron") "UMLS:C0027713") AnnotationAssertion( "ZFA:0005282") AnnotationAssertion(Annotation( "EMAPA:28491") "mature nephron") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "nephroneum") AnnotationAssertion(Annotation( ) Annotation( ) "tubulus renalis") AnnotationAssertion( "UBERON:0001285") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "nephron") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/0/02/Gray1128.png"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "Bgee:AN"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (Bowman's space) AnnotationAssertion(Annotation( ) Annotation( ) Annotation( "MP:0011499") "A narrow chalice-shaped cavity between the glomerular and capsular epithelium of the glomerular capsule of the kidney[TFD]. Between the visceral and parietal layers, into which the filtrate enters after passing through the podocytes' filtration slits[WP]. luminal region between the glomerular capsule visceral and parietal layers, into which filtrate enters after passing through the filtration barrier from the glomerular capillaries[MP].") AnnotationAssertion( "TODO - fix ZFA") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0005283") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "Space between the renal glomerulus and the glomerular capsule. Renal filtrate collects here then passes into the renal tubule.[TAO]") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0005312") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "Space between the renal glomerulus and the glomerular capsule. Renal filtrate collects here then passes into the renal tubule.[TAO]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:27985") AnnotationAssertion( "EMAPA:28263") AnnotationAssertion( "FMA:17676") AnnotationAssertion( "MA:0001664") AnnotationAssertion( "NCIT:C33840") AnnotationAssertion( "TAO:0005283") AnnotationAssertion( "TAO:0005312") AnnotationAssertion(Annotation( "ncithesaurus:Urinary_Space") "UMLS:C0227643") AnnotationAssertion( "ZFA:0005283") AnnotationAssertion( "ZFA:0005312") AnnotationAssertion( "Bowman's space") AnnotationAssertion(Annotation( ) "capsular space") AnnotationAssertion(Annotation( "MP:0011499") "glomerular capsule space") AnnotationAssertion(Annotation( "MP:0011499") "glomerular urinary space") AnnotationAssertion(Annotation( "ZFA:0005283") "inter-glomerular space") AnnotationAssertion(Annotation( "ZFA:0005312") "inter-glomerular space") AnnotationAssertion(Annotation( "ZFA:0005312") "pronephric capsular space") AnnotationAssertion(Annotation( "ZFA:0005283") "renal capsular space") AnnotationAssertion( "urinary space") AnnotationAssertion(Annotation( "EMAPA:28263") "urinary space of renal corpuscle") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "TAO:0005312") "Bowmanb%s space") AnnotationAssertion( "UBERON:0001286") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "Bowman's space") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (proximal convoluted tubule) AnnotationAssertion(Annotation( "GO:0072019") "The proximal convoluted tubule is the most proximal portion of the proximal tubule and extends from the glomerular capsule to the proximal straight tubule.") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0005290") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "Renal tubule that connects to the renal corpuscle.[TAO]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "CALOHA:TS-2198") AnnotationAssertion( "EMAPA:28287") AnnotationAssertion( "EV:0100388") AnnotationAssertion( "FMA:17693") AnnotationAssertion( "MA:0001669") AnnotationAssertion( "NCIT:C33417") AnnotationAssertion( "TAO:0005290") AnnotationAssertion(Annotation( "ncithesaurus:Proximal_Convoluted_Tube") "UMLS:C1514580") AnnotationAssertion( "ZFA:0005290") AnnotationAssertion( "proximal convoluted renal tubule") AnnotationAssertion( "tubulus contortus proximalis") AnnotationAssertion( "uberon") AnnotationAssertion( "1st convoluted tubule") AnnotationAssertion( "PCT") AnnotationAssertion( "first convoluted tubule") AnnotationAssertion(Annotation( "EMAPA:28287") "kidney proximal convoluted tubule") AnnotationAssertion(Annotation( ) "renal proximal convoluted tubule") AnnotationAssertion(Annotation( ) Annotation( ) "tubulus contortus proximalis") AnnotationAssertion(Annotation( ) "tubulus convolutus proximalis") AnnotationAssertion( "UBERON:0001287") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "proximal convoluted tubule") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/0/02/Gray1128.png"^^xsd:anyURI) SubClassOf(Annotation( "MA"^^xsd:string) ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "MA uses subclass") Annotation( "GOC:mtg_kidney_jan10") ObjectSomeValuesFrom( )) SubClassOf(Annotation( "GO"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "Wikipedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (loop of Henle) AnnotationAssertion(Annotation( "MGI:csmith"^^xsd:string) Annotation( "MP:0004755") "The section of the renal tubule in the kidney medulla with a hairpin bend; consists of a descending limb and an ascending limb, and is situated between the proximal convoluted tubule to the distal convoluted tubule; it functions to reabsorb water and ions from the urine.") AnnotationAssertion( "the definitions of some kidney parts (e.g. proximal straight tubule) refer to Henle's loop, even in species where this may not be present. Requires review.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001270") Annotation( "VHOG"^^xsd:string) Annotation( ) "A highly specialized segment of the mammalian kidney tubules, that dips into the medulla. [Bemis_WE, Functional_Anatomy_of_the_Vertebrates:_An_Evolutionary_Perspective, Grande_L, Third_Edition_(2001)_Orlando_Fla.:_Harcourt_College_Publishers, Walker_WF, p.648, see_Liem_KF][VHOG]") AnnotationAssertion(Annotation( ) "The structure differs considerably between species; there is a definite physical loop of Henle in the mammalian and avian renal systems but this seems to be absent in Xenopus. However, homologs of some, but not all, molecular markers (e.g. cldn8 and clcnk) of the mammalian loop of Henle were found to be present in the pronephros of the frog larva .") AnnotationAssertion(Annotation( ) "The loop of Henle plays an important role in creating a concentration gradient in the medulla of the kidney. It is involved in reabsorption of filtered water and ions including sodium, potassium and calcium, and independently regulates both the volume and osmolarity of body fluids.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0004608") AnnotationAssertion( "EMAPA:19280") AnnotationAssertion( "EV:0100390") AnnotationAssertion( "FMA:17698") AnnotationAssertion( "GAID:437") AnnotationAssertion( "MA:0001675") AnnotationAssertion( "MESH:D008138") AnnotationAssertion( "NCIT:C33006") AnnotationAssertion(Annotation( "ncithesaurus:Loop_of_Henle") "UMLS:C0023986") AnnotationAssertion( "VHOG:0001270") AnnotationAssertion( "Henle loop") AnnotationAssertion( "Henle's loop") AnnotationAssertion(Annotation( ) Annotation( ) "ansa nephroni") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001288") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "loop of Henle") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/0/02/Gray1128.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (descending limb of loop of Henle) AnnotationAssertion(Annotation( "MGI:anna"^^xsd:string) Annotation( "MP:0011341") "The portion of the renal tubule that constitutes the proximal part of the loop of Henle, has low permeability to ions and urea, and is highly permeable to water; it consists of an initial short thick segment lined by low simple cuboidal epithelium and a long thin segment lined by simple squamous epithelium; however, this distinction is not as important physiologically as in the ascending limb, so often the two are treated as one structure.") AnnotationAssertion( "descending limb") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:35511") AnnotationAssertion( "FMA:17705") AnnotationAssertion( "MA:0001679") AnnotationAssertion( "NCIT:C32456") AnnotationAssertion(Annotation( "ncithesaurus:Descending_Limb_of_the_Henle_s_Loop") "UMLS:C0227657") AnnotationAssertion( "descending limb of Henle's loop") AnnotationAssertion( "loop of Henle descending limb") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001289") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "descending limb of loop of Henle") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/0/02/Gray1128.png"^^xsd:anyURI) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (proximal straight tubule) AnnotationAssertion(Annotation( "GO:0072020") "The proximal straight tubule is the part of the descending limb that extends from the proximal convoluted tubule to the descending thin tubule.") AnnotationAssertion( "TODO - is S3 exactly coincident with PST? todo - ensure relationships work across species (loop of Henle)") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0005291") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "Portion of the renal tubule which is just posterior to the proximal convoluted tubule.[TAO]") AnnotationAssertion( "UBERON:0005166") AnnotationAssertion( ) AnnotationAssertion( "BTO:0000055") AnnotationAssertion( "EMAPA:29661") AnnotationAssertion( "EMAPA:29669") AnnotationAssertion( "FMA:17716") AnnotationAssertion( "MA:0002614") AnnotationAssertion( "TAO:0005291") AnnotationAssertion( "ZFA:0005291") AnnotationAssertion(Annotation( "GO:0072020") "S3") AnnotationAssertion( "thick descending limb of proximal tubule") AnnotationAssertion( "tubulus rectus proximalis") AnnotationAssertion( "uberon") AnnotationAssertion( "pars recta") AnnotationAssertion(Annotation( "BTO:0000055") "pars recta tubuli renalis") AnnotationAssertion(Annotation( "MA:0002614") "proximal tubule segment 3") AnnotationAssertion(Annotation( "EMAPA:29661") "segment 3 of proximal tubule") AnnotationAssertion( "UBERON:0001290") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "proximal straight tubule") SubClassOf( ) SubClassOf(Annotation( "MA"^^xsd:string) ) SubClassOf(Annotation( "MA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "MA uses subclass") Annotation( "GOC:mtg_kidney_jan10") ObjectSomeValuesFrom( )) SubClassOf(Annotation( "MA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (thick ascending limb of loop of Henle) AnnotationAssertion(Annotation( "MGI:anna"^^xsd:string) Annotation( "MP:0011344") "The distal sub-portion of the ascending loop of Henle which is lined by simple cuboidal epithelium and enters the renal cortex to empty a hypotonic filtrate into the distal convoluted tubule.") AnnotationAssertion( "TODO - thick/thin check. Also - does the loop of Henle overlap the distal convoluted tubule? FMA divides DCT into straight and convoluted portions") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:28396") AnnotationAssertion( "EMAPA:29671") AnnotationAssertion( "EMAPA:35512") AnnotationAssertion( "FMA:17722") AnnotationAssertion( "MA:0001677") AnnotationAssertion( "ascending thick limb") AnnotationAssertion(Annotation( "MA:0001677") "distal straight tubule") AnnotationAssertion(Annotation( "MA:0001677") "loop of Henle ascending limb thick segment") AnnotationAssertion( "straight portion of distal convoluted renal tubule") AnnotationAssertion(Annotation( "FMA:17722") "straight portion of distal convoluted tubule") AnnotationAssertion( "thick ascending limb") AnnotationAssertion( "thick ascending limb of Henle's loop") AnnotationAssertion(Annotation( "FMA:17722") "thick ascending limb of distal tubule") AnnotationAssertion(Annotation( "FMA:17722") "tubulus rectus distalis") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "tubulus rectus distalis") AnnotationAssertion( "UBERON:0001291") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "thick ascending limb of loop of Henle") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/0/02/Gray1128.png"^^xsd:anyURI) SubClassOf(Annotation( "MA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (distal convoluted tubule) AnnotationAssertion(Annotation( "GO:0072025") "The first segment of the nephron lying just downstream from the loop of Henle, immediately after the macula densa.") AnnotationAssertion(Annotation( ) "a portion of kidney nephron between the loop of Henle and the collecting duct system[Wikipedia:Distal_convoluted_tubule].") AnnotationAssertion( "in humans it is responsible for the reabsorption of about 5% of filtered sodium via the thiazide-sensitive Na-Cl symporter.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:28393") AnnotationAssertion( "EV:0100389") AnnotationAssertion( "FMA:17721") AnnotationAssertion( "MA:0001666") AnnotationAssertion( "NCIT:C32469") AnnotationAssertion(Annotation( "ncithesaurus:Distal_Convoluted_Tubule") "UMLS:C0022676") AnnotationAssertion( "distal convoluted renal tubule") AnnotationAssertion( "tubulus contortus distalis") AnnotationAssertion( "uberon") AnnotationAssertion( "second convoluted tubule") AnnotationAssertion(Annotation( ) Annotation( ) "tubulus contortus distalis") AnnotationAssertion(Annotation( ) "tubulus convolutus distalis") AnnotationAssertion( "UBERON:0001292") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "distal convoluted tubule") AnnotationAssertion( "Kidney:nephron.png"^^xsd:anyURI) SubClassOf(Annotation( "MA"^^xsd:string) ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "EMAPA"^^xsd:string) Annotation( "GO"^^xsd:string) Annotation( "MA-modified-from-isa") ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (outer medulla of kidney) AnnotationAssertion(Annotation( ) Annotation( "GOC:mtg_kidney_jan10") "The renal outer medulla is the region of the kidney that lies between the renal cortex and the renal inner medulla[GO].") AnnotationAssertion( "BTO:0001746") AnnotationAssertion( "CALOHA:TS-0508") AnnotationAssertion( "EMAPA:28310") AnnotationAssertion( "FMA:17733") AnnotationAssertion( "MA:0001653") AnnotationAssertion( "outer renal medulla") AnnotationAssertion( "outer zone of medulla of kidney") AnnotationAssertion( "outer zone of renal medulla") AnnotationAssertion(Annotation( "BTO:0001746") "renal outer medulla") AnnotationAssertion(Annotation( "FMA:17733") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "zona externa (medullaris renalis)") AnnotationAssertion(Annotation( "FMA:17733") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "zona externa medullae renalis") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0001746") "kidney outer medulla") AnnotationAssertion(Annotation( "FMA:17733") "set of outer region of renal pyramids") AnnotationAssertion( "UBERON:0001293") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "outer medulla of kidney") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (inner medulla of kidney) AnnotationAssertion(Annotation( "GO:0072053") "Innermost region of the mammalian kidney.") AnnotationAssertion(Annotation( "GO:0072053") "unique to mammals") AnnotationAssertion( "BTO:0001745") AnnotationAssertion( "CALOHA:TS-0506") AnnotationAssertion( "EMAPA:28349") AnnotationAssertion( "FMA:17734") AnnotationAssertion( "MA:0001652") AnnotationAssertion( "inner renal medulla") AnnotationAssertion( "inner zone of medulla of kidney") AnnotationAssertion( "inner zone of renal medulla") AnnotationAssertion(Annotation( "BTO:0001745") "renal inner medulla") AnnotationAssertion( "set of inner region of renal pyramids") AnnotationAssertion(Annotation( "FMA:17734") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "zona interna (medullaris renalis)") AnnotationAssertion(Annotation( "FMA:17734") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "zona interna medullae renalis") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0001745") "kidney inner medulla") AnnotationAssertion( "UBERON:0001294") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "inner medulla of kidney") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (endometrium) AnnotationAssertion(Annotation( "MESH:A05.360.319.679.490") Annotation( "MGI:smb"^^xsd:string) Annotation( "MP:0004896") "The glandular mucous membrane lining of the uterine cavity that is hormonally responsive during the estrous/menstrual cycle and during pregnancy.") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001285") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( ) "The mucous membrane lining the uterus. [TFD][VHOG]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001285") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0030223693 Liem KF, Bemis WE, Walker WF, Grande L, Functional Anatomy of the Vertebrates: An Evolutionary Perspective (2001) p.144") "The maternal part of the placenta (of eutherian mammals) is the vascularized and glandular uterine lining, or endometrium.[well established][VHOG]") AnnotationAssertion( "endometrial") AnnotationAssertion( "Animals that have estrous cycles reabsorb the endometrium if conception does not occur during that cycle. Animals that have menstrual cycles shed the endometrium through menstruation instead") AnnotationAssertion(Annotation( "FMA"^^xsd:string) "in FMA this is subdivided into basal and outer") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0001422") AnnotationAssertion( "CALOHA:TS-0276") AnnotationAssertion( "EFO:0000980") AnnotationAssertion( "EMAPA:29917") AnnotationAssertion( "EV:0100115") AnnotationAssertion( "FMA:17742") AnnotationAssertion( "GAID:377") AnnotationAssertion( "MA:0000390") AnnotationAssertion( "MAT:0000319") AnnotationAssertion( "MESH:D004717") AnnotationAssertion( "MIAA:0000319") AnnotationAssertion( "NCIT:C12313") AnnotationAssertion(Annotation( "ncithesaurus:Endometrium") "UMLS:C0014180") AnnotationAssertion( "VHOG:0001285") AnnotationAssertion(Annotation( "FMA:17742") "tunica mucosa (endometrium)") AnnotationAssertion(Annotation( ) Annotation( ) "tunica mucosa uteri") AnnotationAssertion(Annotation( "BTO:0001422") "uterine endometrium") AnnotationAssertion( "uberon") AnnotationAssertion( "uterine mucosa") AnnotationAssertion(Annotation( "BTO:0001422") "uterine mucous membrane") AnnotationAssertion( "UBERON:0001295") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "endometrium") AnnotationAssertion( "Illu:cervix.jpg"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (myometrium) AnnotationAssertion(Annotation( "MESH:A02.633.570.500") Annotation( "MGI:brs") Annotation( "MP:0008256") "The smooth muscle coat of the uterus, which forms the main mass of the organ and surrounds and supports the endometrium.") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001281") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( ) "The muscular wall of the uterus. [TFD][VHOG]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001281") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "PMID:15471813 Spencer TE, Bazer FW, Uterine and placental factors regulating conceptus growth in domestic animals. Journal of Animal Science (2004)") "In all mammals, the uterus develops as a specialization of the paramesonephric or Müllerian ducts, which gives rise to the infundibula, oviducts, uterus, cervix, and anterior vagina. Morphogenetic events common to development of all uteri include: 1) differentiation and growth of the myometrium, 2) differentiation and morphogenesis of the endometrial glands, and 3) organization and stratification of endometrial stroma. Uterine development is initiated in the fetus, but is only completed postnatally with differentiation and development of the endometrial glands.[well established][VHOG]") AnnotationAssertion( "myometrial") AnnotationAssertion( "The myometrium stretches (the smooth muscle cells expand in both size and number) during pregnancy to allow for the harboring of the pregnancy, and contracts in a coordinated fashion during the process of labor. After delivery the myometrium contracts to expel the placenta and reduce blood loss.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0000907") AnnotationAssertion( "CALOHA:TS-0652") AnnotationAssertion( "EFO:0001970") AnnotationAssertion( "EMAPA:29923") AnnotationAssertion( "EV:0100116") AnnotationAssertion( "FMA:17743") AnnotationAssertion( "GAID:171") AnnotationAssertion( "MA:0000391") AnnotationAssertion( "MESH:D009215") AnnotationAssertion( "NCIT:C12314") AnnotationAssertion(Annotation( "ncithesaurus:Myometrium") "UMLS:C0027088") AnnotationAssertion( "VHOG:0001281") AnnotationAssertion( "tunica muscularis (myometrium)") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "tunica muscularis") AnnotationAssertion(Annotation( "BTO:0000907") "uterine myometrium") AnnotationAssertion( "uterine smooth muscle") AnnotationAssertion( "UBERON:0001296") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "myometrium") AnnotationAssertion( "Illu:cervix.jpg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (serosa of uterus) AnnotationAssertion(Annotation( ) "Outer serosa layer of the uterus.") AnnotationAssertion( "TODO - check for parallel structure with peritoneum") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37792") AnnotationAssertion( "FMA:17744") AnnotationAssertion( "MA:0001729") AnnotationAssertion( "NCIT:C33298") AnnotationAssertion(Annotation( "ncithesaurus:Perimetrium") "UMLS:C0227824") AnnotationAssertion(Annotation( ) "perimetrium") AnnotationAssertion(Annotation( ) "serous coat of uterus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "serous membrane of uterus") AnnotationAssertion( "tunica serosa (perimetrium)") AnnotationAssertion(Annotation( "FMA:17744") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "tunica serosa uteri") AnnotationAssertion( "uterine serosa") AnnotationAssertion( "uterus serosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "uterus serous membrane") AnnotationAssertion( "visceral peritoneum of uterus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001297") AnnotationAssertion(rdfs:label "serosa of uterus") AnnotationAssertion( "Illu:cervix.jpg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (psoas major muscle) AnnotationAssertion(Annotation( ) "The psoas major is a long fusiform muscle placed on the side of the lumbar region of the vertebral column and brim of the lesser pelvis. It joins the iliacus muscle to form the iliopsoas. In less than 50 per cent of subjects the psoas major is accompanied by the psoas minor. [WP,unvetted].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0001877") AnnotationAssertion( "EMAPA:18169") AnnotationAssertion( "FMA:18060") AnnotationAssertion( "MA:0002358") AnnotationAssertion( "NCIT:C33420") AnnotationAssertion( "OpenCyc:Mx4rwU5ZfZwpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Psoas_Major") "UMLS:C0224419") AnnotationAssertion(Annotation( "MA:0002358") "psoas major") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "m. psoas major") AnnotationAssertion( "UBERON:0001298") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "psoas major muscle") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/e/e2/Anterior_Hip_Muscles_2.PNG"^^xsd:anyURI) SubClassOf(Annotation( "MA"^^xsd:string) ) SubClassOf(Annotation( "Transverse processes of T12-L5 and the lateral aspects of the discs between them") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "in the lesser trochanter of the femur") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (glans penis) AnnotationAssertion(Annotation( "MGI:anna"^^xsd:string) Annotation( "MP:0009102") "The conic expansion of the corpus spongiosum that forms the head of the penis.") AnnotationAssertion(Annotation( "EV:0100108") "glans") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0003118") AnnotationAssertion( "EMAPA:18988") AnnotationAssertion( "EV:0100108") AnnotationAssertion( "FMA:18247") AnnotationAssertion( "GAID:0000012") AnnotationAssertion( "MA:0002726") AnnotationAssertion( "NCIT:C12324") AnnotationAssertion( "OpenCyc:Mx4rvdCpE5wpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Glans_Penis") "UMLS:C0227948") AnnotationAssertion( "VHOG:0001475") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0003118") "balanus") AnnotationAssertion(Annotation( ) Annotation( ) "coronal sulcus") AnnotationAssertion( "UBERON:0001299") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "glans penis") AnnotationAssertion( "Male:anatomy.png"^^xsd:anyURI) AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/1/13/Anteriorglanspenis.jpg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "Bgee:AN"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (scrotum) AnnotationAssertion(Annotation( ) Annotation( "ISBN:0-683-40008-8"^^xsd:string) Annotation( "MP:0002669") "The external sac of skin that encloses the testes. It is an extension of the abdomen, and in placentals is located between the penis and anus.") AnnotationAssertion( "scrotal") AnnotationAssertion(Annotation( "PMC1570914") Annotation( "NCBITaxon:9780") "In elephants the testes remain in the abdomen") AnnotationAssertion(Annotation( "PMC1570914") Annotation( "NCBITaxon:9363") "In hedgehogs the testes remain in the inguinal canal") AnnotationAssertion(Annotation( "NCBITaxon:9606") "In humans and some other mammals, the base of the scrotum becomes covered with pubic hair at puberty") AnnotationAssertion(Annotation( ) Annotation( "NCBITaxon:9263") "In marsupials, the scrotum is not homologous to the eutherian scrotum, and development is under the control of X-linked genes, not androgens") AnnotationAssertion(Annotation( "ISBN:113945742X") Annotation( "NCBITaxon:9263") "In marsupials, the scrotum is positioned in the caudal area of the abdomen, in the same position as the pouch in females. It has been suggested that the pouch and marsupial scrotum are sexual homologs, but it is more likely they arise from different primordia in the same morphogenetic field") AnnotationAssertion( "The scrotum of marsupials is not homologous with the scrotum of mammals[ISBN:113945742X]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0003098") AnnotationAssertion( "CALOHA:TS-2341") AnnotationAssertion( "EMAPA:19296") AnnotationAssertion( "FMA:18252") AnnotationAssertion( "GAID:393") AnnotationAssertion( "MA:0000409") AnnotationAssertion( "MESH:D012611") AnnotationAssertion( "NCIT:C12785") AnnotationAssertion( "OpenCyc:Mx4rwUC_upwpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Scrotum") "UMLS:C0036471") AnnotationAssertion( "galen:Scrotum") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001300") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "scrotum") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/a/a6/Scrotum_warm_and_cold.jpg"^^xsd:anyURI) AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/en/thumb/3/3e/HairedHumanScrotum.png/200px-HairedHumanScrotum.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "Wikipedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (epididymis) AnnotationAssertion(Annotation( "MGI:pvb") Annotation( "MP:0002631") "The elongated structure connected to the posterior surface of the testis that transports, stores, and matures spermatozoa between testis and vas deferens.") AnnotationAssertion( "Kardong has epididymis in elasmobranch") AnnotationAssertion( "epididymal") AnnotationAssertion(Annotation( "WP"^^xsd:string) "A similar, but probably non-homologous, structure is found in cartilaginous fishes") AnnotationAssertion( "Typically divided into three main regions. In reptiles, there is an additional canal between the testis and the head of the epididymis, which receives the various efferent ducts. This is, however, absent in all birds and mammals. The epididymis is covered by a two layered pseudostratified epithelium. The epithelium is separated by a basement membrane from the connective tissue wall which has smooth muscle cells.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0000408") AnnotationAssertion( "CALOHA:TS-0285") AnnotationAssertion( "EFO:0000982") AnnotationAssertion( "EMAPA:19290") AnnotationAssertion( "EV:0100103") AnnotationAssertion( "FMA:18255") AnnotationAssertion( "GAID:397") AnnotationAssertion( "MA:0000397") AnnotationAssertion( "MAT:0000130") AnnotationAssertion( "MESH:A05.360.444.849.286") AnnotationAssertion( "MIAA:0000130") AnnotationAssertion( "NCIT:C12328") AnnotationAssertion(Annotation( "ncithesaurus:Epididymis") "UMLS:C0014533") AnnotationAssertion( "VHOG:0001265") AnnotationAssertion( "galen:Epididymis") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001301") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "epididymis") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/c/c3/Illu_testis_surface.jpg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "Wikipedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (right uterine tube) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A fallopian tube that is part of a right side of organism [Automatically generated definition].") AnnotationAssertion( "https://github.com/obophenotype/uberon/wiki/Modeling-paired-structures-Design-Pattern"^^xsd:anyURI) AnnotationAssertion( "non-functional in monotremes[ISBN:978-0226870137]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37369") AnnotationAssertion( "FMA:18483") AnnotationAssertion( "MA:0001717") AnnotationAssertion( "NCIT:C33475") AnnotationAssertion(Annotation( "ncithesaurus:Right_Fallopian_Tube") "UMLS:C0227900") AnnotationAssertion( "right fallopian tube") AnnotationAssertion( "right oviduct") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001302") AnnotationAssertion(rdfs:label "right uterine tube") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (left uterine tube) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A fallopian tube that is part of a left side of organism [Automatically generated definition].") AnnotationAssertion( "https://github.com/obophenotype/uberon/wiki/Modeling-paired-structures-Design-Pattern"^^xsd:anyURI) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37368") AnnotationAssertion( "FMA:18484") AnnotationAssertion( "MA:0001716") AnnotationAssertion( "NCIT:C32959") AnnotationAssertion(Annotation( "ncithesaurus:Left_Fallopian_Tube") "UMLS:C0227902") AnnotationAssertion( "left fallopian tube") AnnotationAssertion( "left oviduct") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001303") AnnotationAssertion(rdfs:label "left uterine tube") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (germinal epithelium of ovary) AnnotationAssertion(Annotation( ) Annotation( ) Annotation( ) "Layer of simple cuboidal cells covering surface of ovary[WP].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0004483") AnnotationAssertion( "EHDAA:8126") AnnotationAssertion( "EMAPA:17963") AnnotationAssertion( "FMA:18629") AnnotationAssertion( "MA:0001711") AnnotationAssertion( "NCIT:C61518") AnnotationAssertion( "RETIRED_EHDAA2:0001361") AnnotationAssertion(Annotation( "ncithesaurus:Ovarian_Surface_Epithelium") "UMLS:C0227875") AnnotationAssertion( "VHOG:0000630") AnnotationAssertion( "epithelium superficiale (ovarium)") AnnotationAssertion(Annotation( ) "germinal epithelium (female)") AnnotationAssertion(Annotation( "BTO:0004483") "ovarian surface epithelium") AnnotationAssertion( "ovary germinal epithelium") AnnotationAssertion( "surface epithelium of ovary") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "EMAPA:17384") "female coelomic epithelium") AnnotationAssertion(Annotation( "EMAPA:17963") "ovary surface epithelium") AnnotationAssertion( "UBERON:0001304") AnnotationAssertion(rdfs:comment "Controversial - see article. Requires expert input. Also check BTO placement") AnnotationAssertion(rdfs:label "germinal epithelium of ovary") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (ovarian follicle) AnnotationAssertion(Annotation( ) Annotation( ) "A spherical aggregation of cells in the ovary that contains a single oocyte[WP,modified].") AnnotationAssertion( "TODO - align subtypes based on staging, which is taxon-specific") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0001110") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "Oocyte development of zebrafish has been divided into five stages based on morphological criteria and on physiological and biochemical events. Stage I follicles (less than 140 microns) are primary growth stage, stage II follicles (140-340 microns) are cortical alveolus stage, stage III (340-690 microns) are vitellogenesis, stage IV (690-730 microns) are oocyte maturation, and stage V follicles are matured egg. Selman et al, 1993.[TAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001536") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "DOI:10.1146/annurev.cellbio.042308.13350 DeFalco T, Capel B, Gonad morphogenesis in vertebrates: divergent means to a convergent end. Annual review of cell and developmental biology (2009)") "Examination of different vertebrate species shows that the adult gonad is remarkably similar in its morphology across different phylogenetic classes. Surprisingly, however, the cellular and molecular programs employed to create similar organs are not evolutionarily conserved.[uncertain][VHOG]") AnnotationAssertion( "These structures are periodically initiated to grow and develop, culminating in ovulation of usually a single competent oocyte in humans. These eggs/ova are only developed once every menstrual cycle (e.g. once a month in humans)") AnnotationAssertion( "The somatic cell component of the follicle produces hormones important for oocyte development and proper endocrine function") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0000475") AnnotationAssertion( "CALOHA:TS-0726") AnnotationAssertion( "EMAPA:35627") AnnotationAssertion( "FMA:18640") AnnotationAssertion( "GAID:371") AnnotationAssertion( "MA:0001707") AnnotationAssertion( "MAT:0000449") AnnotationAssertion( "MESH:D006080") AnnotationAssertion( "NCIT:C33244") AnnotationAssertion( "TAO:0001110") AnnotationAssertion(Annotation( "ncithesaurus:Ovarian_Follicle") "UMLS:C0018120") AnnotationAssertion( "VHOG:0001536") AnnotationAssertion( "ZFA:0001110") AnnotationAssertion( "follicle of ovary") AnnotationAssertion(Annotation( "FMA:18640") "follicle of ovary viewed macroscopically") AnnotationAssertion(Annotation( "MA:0001707") "ovary follicle") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "ZFA:0001110") "egg follicle") AnnotationAssertion(Annotation( ) Annotation( ) "folliculi ovarici primarii") AnnotationAssertion(Annotation( ) Annotation( ) "folliculi ovarici vesiculosi") AnnotationAssertion( "UBERON:0001305") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "ovarian follicle") AnnotationAssertion( "Primary:follicle-4.JPG"^^xsd:anyURI) AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/c/ca/Human_ovarian_follicle.jpg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "Wikipedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (cumulus oophorus) AnnotationAssertion(Annotation( ) "A cluster of cells that project into the cavity of the mature ovarian follicle. It is released with the embedded oocyte during ovulation. In order for fertilization to occur this layer must be penetrated by the spermatocyte. [WP,modified].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:35267") AnnotationAssertion( "FMA:18659") AnnotationAssertion( "MA:0002414") AnnotationAssertion(Annotation( "FMA:18659") Annotation( ) "cumulus ovaricus") AnnotationAssertion( "discus proligerus") AnnotationAssertion(Annotation( "GO:0001550") "ovarian cumulus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001306") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "cumulus oophorus") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/3/3a/Gray1164.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (capsule of ovary) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A capsule that surrounds a female gonad.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:35626") AnnotationAssertion( "FMA:18662") AnnotationAssertion( "MA:0001706") AnnotationAssertion( "NCIT:C49265") AnnotationAssertion(Annotation( "ncithesaurus:Ovarian_Capsule") "UMLS:C0227877") AnnotationAssertion( "ovarian capsule") AnnotationAssertion( "ovary capsule") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001307") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "capsule of ovary") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (external iliac artery) AnnotationAssertion(Annotation( ) "The external iliac artery is a large artery in the pelvic region that carries blood to the lower limb. The external iliac artery is a paired artery, meaning there is one on each side of the body: a right external iliac artery and left external iliac artery. The external iliac artery is accompanied by the external iliac vein, which is located posterior to the artery. [WP,unvetted].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0004666") AnnotationAssertion( "EHDAA2:0000463") AnnotationAssertion( "EHDAA:4337") AnnotationAssertion( "EMAPA:17614") AnnotationAssertion( "FMA:18805") AnnotationAssertion( "MA:0001973") AnnotationAssertion( "NCIT:C32558") AnnotationAssertion( "OpenCyc:Mx4rvkh47pwpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:External_Iliac_Artery") "UMLS:C0226398") AnnotationAssertion( "galen:ExternalIliacArtery") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "arteria iliaca externa") AnnotationAssertion( "UBERON:0001308") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "external iliac artery") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/3/3e/Gray539.png"^^xsd:anyURI) SubClassOf(Annotation( "MA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (internal iliac artery) AnnotationAssertion(Annotation( ) "The internal iliac artery (formerly known as the hypogastric artery) is the main artery of the pelvis. [WP,unvetted].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0004667") AnnotationAssertion( "EMAPA:17860") AnnotationAssertion( "FMA:18808") AnnotationAssertion( "MA:0001974") AnnotationAssertion( "NCIT:C32845") AnnotationAssertion(Annotation( "ncithesaurus:Internal_Iliac_Artery") "UMLS:C0226364") AnnotationAssertion( "galen:InternalIliacArtery") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "arteria iliaca interna") AnnotationAssertion(Annotation( "BTO:0004667") "hypogastric artery") AnnotationAssertion( "UBERON:0001309") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "internal iliac artery") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/d/d3/Iliac_artery_bifurcation.PNG"^^xsd:anyURI) SubClassOf(Annotation( "MA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (umbilical artery) AnnotationAssertion(Annotation( ) Annotation( ) "The umbilical artery is a paired artery (with one for each half of the body) that is found in the abdominal and pelvic regions. In the fetus, it extends into the umbilical cord. [WP,unvetted].") AnnotationAssertion( "todo - compare with EHDAA2. Check embryonic vs extraembryonic, developmental relationships") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0000841") AnnotationAssertion( "CALOHA:TS-1077") AnnotationAssertion( "EHDAA:1026") AnnotationAssertion( "EHDAA:410") AnnotationAssertion( "EMAPA:16331") AnnotationAssertion( "EMAPA:16372") AnnotationAssertion( "FMA:18820") AnnotationAssertion( "GAID:516") AnnotationAssertion( "MA:0002072") AnnotationAssertion( "MESH:D014469") AnnotationAssertion( "NCIT:C33827") AnnotationAssertion( "OpenCyc:Mx4rCWdhMGWbEd2AAABQjYGu0g") AnnotationAssertion( "RETIRED_EHDAA2:0002106") AnnotationAssertion(Annotation( "ncithesaurus:Umbilical_Artery") "UMLS:C0041632") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "a. umbilicalis") AnnotationAssertion( "UBERON:0001310") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "umbilical artery") AnnotationAssertion(rdfs:seeAlso "https://github.com/obophenotype/uberon/issues/328"^^xsd:anyURI) AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/e/ee/Gray502.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) # Class: (inferior vesical artery) AnnotationAssertion(Annotation( ) "An artery that supplies blood to the lower urinary bladder.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37089") AnnotationAssertion( "FMA:18823") AnnotationAssertion( "MA:0002079") AnnotationAssertion( "NCIT:C52685") AnnotationAssertion(Annotation( "ncithesaurus:Inferior_Vesical_Artery") "UMLS:C0226377") AnnotationAssertion(Annotation( ) Annotation( ) "arteria vesicali inferior") AnnotationAssertion(Annotation( ) Annotation( ) "arteria vesicalis inferior") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "arteria vesicalis inferior") AnnotationAssertion( "UBERON:0001311") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "inferior vesical artery") AnnotationAssertion( "https://upload.wikimedia.org/wikipedia/commons/1/13/Inferiorvesical.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (superior vesical artery) AnnotationAssertion(Annotation( ) "An artery that supplies blood to the upper urinary bladder.") AnnotationAssertion( "The first part of the superior vesical artery represents the terminal section of the previous portion of the umbilical artery (fetal hypogastric artery)[WP]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37123") AnnotationAssertion( "FMA:18839") AnnotationAssertion( "MA:0002080") AnnotationAssertion( "NCIT:C52686") AnnotationAssertion(Annotation( "ncithesaurus:Superior_Vesical_Artery") "UMLS:C0226376") AnnotationAssertion(Annotation( ) Annotation( ) "arteria vesicali superior") AnnotationAssertion(Annotation( ) Annotation( ) "arteria vesicalis superior") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "arteriae vesicales superiores") AnnotationAssertion( "UBERON:0001312") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "superior vesical artery") AnnotationAssertion( "https://upload.wikimedia.org/wikipedia/commons/0/02/Internal_iliac_branches.PNG"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) # Class: (iliolumbar artery) AnnotationAssertion(Annotation( ) "The iliolumbar artery is a branch of the posterior trunk of the internal iliac artery. [WP,unvetted].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37085") AnnotationAssertion( "FMA:18845") AnnotationAssertion( "MA:0001976") AnnotationAssertion( "NCIT:C52859") AnnotationAssertion(Annotation( "ncithesaurus:Iliolumbar_Artery") "UMLS:C0226367") AnnotationAssertion( "ilio-lumbar artery") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "arteria iliolumbalis") AnnotationAssertion( "UBERON:0001313") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "iliolumbar artery") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/b/bd/Gray585.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obturator artery) AnnotationAssertion(Annotation( ) "The obturator artery passes antero-inferiorly (forwards and downwards) on the lateral wall of the pelvis, to the upper part of the obturator foramen, and, escaping from the pelvic cavity through the obturator canal, it divides into both an anterior and a posterior branch. [WP,unvetted].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37671") AnnotationAssertion( "FMA:18865") AnnotationAssertion( "MA:0002008") AnnotationAssertion( "NCIT:C33190") AnnotationAssertion(Annotation( "ncithesaurus:Obturator_Artery") "UMLS:C0226369") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "arteria obturatoria") AnnotationAssertion( "UBERON:0001314") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "obturator artery") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/6/6f/Gray547.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (superior gluteal artery) AnnotationAssertion(Annotation( ) "The superior gluteal artery (gluteal artery) is the largest branch of the internal iliac artery, and appears to be the continuation of the posterior division of that vessel. It is a short artery which runs backward between the lumbosacral trunk and the first sacral nerve, and, passing out of the pelvis above the upper border of the Piriformis, immediately divides into a superficial and a deep branch. Within the pelvis it gives off a few branches to the Iliacus, Piriformis, and Obturator internus, and just previous to quitting that cavity, a nutrient artery which enters the ilium. [WP,unvetted].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37120") AnnotationAssertion( "FMA:18868") AnnotationAssertion( "MA:0002054") AnnotationAssertion( "NCIT:C32688") AnnotationAssertion(Annotation( "ncithesaurus:Gluteal_Artery") "UMLS:C0226371") AnnotationAssertion( "arteria glutealis superior") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "arteria glutea superior") AnnotationAssertion( "UBERON:0001315") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "superior gluteal artery") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/3/3a/Gray1244.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (external iliac vein) AnnotationAssertion(Annotation( ) "A large vein that connects the femoral vein to the common iliac vein. Their origin is at the inferior margin of the inguinal ligaments and they terminate when they join the internal iliac veins (to form the common iliac veins). Both external iliac veins are accompanied along their course by external iliac arteries. [WP,modified].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0000464") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37144") AnnotationAssertion( "FMA:18883") AnnotationAssertion( "MA:0002144") AnnotationAssertion( "NCIT:C32560") AnnotationAssertion( "OpenCyc:Mx4rwQUYtZwpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:External_Iliac_Vein") "UMLS:C0226761") AnnotationAssertion( "galen:ExternalIliacVein") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "vena iliaca externa") AnnotationAssertion( "UBERON:0001316") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "external iliac vein") AnnotationAssertion( "Iliac:veins.gif"^^xsd:anyURI) SubClassOf(Annotation( "MA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (internal iliac vein) AnnotationAssertion(Annotation( ) "A vein that begins near the upper part of the greater sciatic foramen, passes upward behind and slightly medial to the hypogastric artery and, at the brim of the pelvis, joins with the external iliac to form the common iliac vein. [WP,unvetted].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0000874") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37148") AnnotationAssertion( "FMA:18884") AnnotationAssertion( "MA:0002139") AnnotationAssertion( "MA:0002145") AnnotationAssertion( "NCIT:C32847") AnnotationAssertion(Annotation( "ncithesaurus:Internal_Iliac_Vein") "UMLS:C0226764") AnnotationAssertion( "VHOG:0000749") AnnotationAssertion( "galen:InternalIliacVein") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( "MA:0002139") "hypogastric vein") AnnotationAssertion(Annotation( ) Annotation( ) "v. hypogastrica") AnnotationAssertion(Annotation( ) Annotation( ) "v. iliaca interna") AnnotationAssertion( "UBERON:0001317") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "internal iliac vein") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/c/cb/Internaliliacv.png"^^xsd:anyURI) SubClassOf(Annotation( "MA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (inferior vesical vein) AnnotationAssertion( "inferred from artery") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37158") AnnotationAssertion( "FMA:18890") AnnotationAssertion( "MA:0002264") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001318") AnnotationAssertion(rdfs:label "inferior vesical vein") SubClassOf(Annotation( "true"^^xsd:string) Annotation( "MA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (vaginal vein) AnnotationAssertion(Annotation( ) "One the veins that drains the vaginal venous plexus, into the hypogastric veins. [WP,modified].") AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37796") AnnotationAssertion( "FMA:18899") AnnotationAssertion( "MA:0002251") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "vagina vein") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "vein of vagina") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001319") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "vaginal vein") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/d/d4/Gray589.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA/obol"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (iliolumbar vein) AnnotationAssertion(Annotation( ) "The iliolumbar vein is the vena comitans of the iliolumbar artery. The obturator nerve crosses superficial to it. A single vein is found more commonly than a double vein. It drains vertebral segments four and five. It is closely related to the ascending lumbar vein. [WP,unvetted].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37152") AnnotationAssertion( "FMA:18902") AnnotationAssertion( "MA:0002146") AnnotationAssertion( "NCIT:C53048") AnnotationAssertion(Annotation( "ncithesaurus:Iliolumbar_Vein") "UMLS:C0226760") AnnotationAssertion( "ilio-lumbar vein") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "vena iliolumbalis") AnnotationAssertion( "UBERON:0001320") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "iliolumbar vein") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/b/bd/Gray585.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA/obol"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (obturator vein) AnnotationAssertion(Annotation( ) "The obturator vein begins in the upper portion of the adductor region of the thigh and enters the pelvis through the upper part of the obturator foramen, in the obturator canal. It runs backward and upward on the lateral wall of the pelvis below the obturator artery, and then passes between the ureter and the hypogastric artery, to end in the hypogastric vein. It has an anterior and posterior branch (similar to obturator artery). [WP,unvetted].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37677") AnnotationAssertion( "FMA:18914") AnnotationAssertion( "MA:0002183") AnnotationAssertion( "NCIT:C53056") AnnotationAssertion(Annotation( "ncithesaurus:Obturator_Vein") "UMLS:C0226776") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001321") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "obturator vein") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/b/bd/Gray585.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA/obol"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (sciatic nerve) AnnotationAssertion(Annotation( ) "A large nerve that supplies nearly the whole of the skin of the leg, the muscles of the back of the thigh, and those of the leg and foot. It begins in the lower back and runs through the buttock and down the lower limb.") AnnotationAssertion( "mouse sciatic nerve origins predominantly from the third lumbar (L3) and L4 spinal nerves, unlike the L4 and L5 in rats - http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2700063/") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:1133") AnnotationAssertion( "BTO:0001221") AnnotationAssertion( "CALOHA:TS-0899") AnnotationAssertion( "EFO:0001417") AnnotationAssertion( "EHDAA2:0001779") AnnotationAssertion( "EHDAA:5659") AnnotationAssertion( "EMAPA:18577") AnnotationAssertion( "FMA:19034") AnnotationAssertion( "GAID:852") AnnotationAssertion( "MA:0001172") AnnotationAssertion( "MESH:D012584") AnnotationAssertion( "NCIT:C52810") AnnotationAssertion( "OpenCyc:Mx4rv7MlDJwpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "BIRNLEX:1133") "UMLS:C0036394") AnnotationAssertion(Annotation( "ncithesaurus:Sciatic_Nerve") "UMLS:C0036394") AnnotationAssertion( "VHOG:0000894") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "ischiadic nerve") AnnotationAssertion(Annotation( ) "ischiatic nerve") AnnotationAssertion(Annotation( ) Annotation( ) "nervus ischiadicus") AnnotationAssertion(Annotation( "BTO:0001221") "nervus ischiadicus") AnnotationAssertion(Annotation( "BTO:0001221") "nervus sciaticus") AnnotationAssertion( "UBERON:0001322") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "sciatic nerve") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/3/3a/Gray1244.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) SubClassOf( ObjectSomeValuesFrom( )) # Class: (tibial nerve) AnnotationAssertion(Annotation( ) "The tibial nerve is a branch of the sciatic nerve. The tibial nerve passes through the popliteal fossa to pass below the arch of soleus. In the popliteal fossa the nerve gives off branches to gastrocnemius, popliteus, soleus and plantaris muscles, an articular branch to the knee joint, and a cutaneous branch that will become the sural nerve. The sural nerve is joined by fibres from the common peroneal nerve and runs down the calf to supply the lateral side of the foot. Below the soleus muscle the nerve lies close to the tibia and supplies the tibialis posterior, the flexor digitorum longus and the flexor hallucis longus. The nerve passes into the foot running posterior to the medial malleolus. Here it is bound down by the flexor retinaculum in company with the posterior tibial artery. [WP,unvetted].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:36512") AnnotationAssertion( "FMA:19035") AnnotationAssertion( "GAID:854") AnnotationAssertion( "MA:0001173") AnnotationAssertion( "MESH:D013979") AnnotationAssertion( "NCIT:C52809") AnnotationAssertion( "OpenCyc:Mx4rwNya8JwpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Tibial_Nerve") "UMLS:C0040186") AnnotationAssertion( "medial popliteal nerve") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "n. tibialis") AnnotationAssertion( "UBERON:0001323") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "tibial nerve") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/1/1a/Gray828.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA"^^xsd:string) Annotation( "WP"^^xsd:string) ObjectSomeValuesFrom( )) DisjointClasses(Annotation( "lexical"^^xsd:string) ) # Class: (common fibular nerve) AnnotationAssertion(Annotation( "MP:0011211") "A nerve arising at the terminal division of the sciatic nerve at the popliteal fossa and extending to the neck of the fibula, ultimately innervating the Peroneus muscle[MP].") AnnotationAssertion( "derives into deep and superficial branches") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EFO:0003062") AnnotationAssertion( "FMA:19039") AnnotationAssertion( "GAID:853") AnnotationAssertion( "MA:0001169") AnnotationAssertion( "MESH:D010543") AnnotationAssertion( "NCIT:C52814") AnnotationAssertion( "OpenCyc:Mx4rvwKexZwpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Peroneal_Nerve") "UMLS:C0031173") AnnotationAssertion( "common peroneal nerve") AnnotationAssertion(Annotation( "MP:0011211") "extrernal peroneal nerve") AnnotationAssertion(Annotation( "MP:0011211") "lateral popliteal nerve") AnnotationAssertion(Annotation( "FMA:19039") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "nervus peroneus communis") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "n. fibularis communis") AnnotationAssertion(Annotation( ) Annotation( ) "n. peroneus communis") AnnotationAssertion(Annotation( ) "nervus fibularis communis") AnnotationAssertion( "UBERON:0001324") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "common fibular nerve") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/9/9d/Gray832.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (muscle of pelvis) AnnotationAssertion(Annotation( "FMA:19086") "Muscle (organ) which is a part of the pelvis. Examples: levator ani,.") AnnotationAssertion( "EMAPA:18184") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37481") AnnotationAssertion( "FMA:19086") AnnotationAssertion( "MA:0000534") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "muscle organ of pelvis") AnnotationAssertion(Annotation( "FMA:19086") "pelvic muscle") AnnotationAssertion( "pelvis muscle") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "pelvis muscle organ") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001325") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "muscle of pelvis") SubClassOf(Annotation( "MA"^^xsd:string) ) SubClassOf( ) # Class: (levator ani muscle) AnnotationAssertion(Annotation( ) "The Levator ani is a broad, thin muscle, situated on the side of the pelvis. It is attached to the inner surface of the side of the lesser pelvis, and unites with its fellow of the opposite side to form the greater part of the floor of the pelvic cavity. It supports the viscera in pelvic cavity, and surrounds the various structures which pass through it. In combination with the Coccygeus muscle, it forms the pelvic diaphragm. [WP,unvetted].") AnnotationAssertion( "the levator ani muscle acts to lower the tail, in animals that have one") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:19165") AnnotationAssertion( "FMA:19087") AnnotationAssertion( "MA:0002332") AnnotationAssertion( "NCIT:C32984") AnnotationAssertion(Annotation( "ncithesaurus:Levator_Ani") "UMLS:C0224384") AnnotationAssertion(Annotation( "MA:0002332") "levator ani") AnnotationAssertion(Annotation( ) Annotation( ) "musculus levator ani") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001326") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "levator ani muscle") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/6/63/Gray404.png"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "inner surface of the side of the lesser pelvis") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (lobe of prostate) AnnotationAssertion(Annotation( ) "A portion of a prostate that forms a lobe.") AnnotationAssertion(Annotation( ) Annotation( ) "Anatomically, the human prostate gland is located between the base of the bladder and the rectum, and it completely surrounds the proximal urethra (Fig. 1A). It is a single alobular structure with central (CZ), peripheral (PZ) and transitional (TZ) zones. In contrast, the mouse prostate is not merged into one compact anatomical structure. It comprises four paired lobes situated circumferentially around the urethra, immediately caudal to the urinary bladder-namely, anterior (AP), dorsal (DP), lateral (LP), and ventral (VP) prostate (Fig. 1B). Often, the dorsal and the lateral lobes are thought of in combination and referred to as the dorsolateral (DLP) lobe as they share a ductal system. The mouse AP is considered analogous to the human CZ, which is rarely a site of neoplastic transformation in humans. The mouse DLP is considered most similar to the human PZ, which is the zone in which most carcinomas arise (Xue et al. 1997). These analogies, however, are limited as they are based solely on descriptive data and need to be re-evaluated using molecular techniques before the relationship between specific mouse prostate lobes and the human prostate zones is definitively asserted (Abate-Shen & Shen 2000). The mouse VP does not have a human homologue, and the human TZ does not have a murine homologue") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0000548") AnnotationAssertion( "EMAPA:35712") AnnotationAssertion( "FMA:19570") AnnotationAssertion( "MA:0001738") AnnotationAssertion( "NCIT:C52726") AnnotationAssertion(Annotation( "ncithesaurus:Prostate_Gland_Lobe") "UMLS:C0227970") AnnotationAssertion( "lobe of prostate gland") AnnotationAssertion( "prostate gland lobe") AnnotationAssertion( "prostatic lobe") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001328") AnnotationAssertion(rdfs:label "lobe of prostate") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (prostate gland anterior lobe) AnnotationAssertion( "TODO - check - see comments from http://www.ncbi.nlm.nih.gov/pubmed/15163300") AnnotationAssertion( "consider splitting and having distinct classes for mouse coagulating gland and human anterior prostate. See https://github.com/obophenotype/uberon/issues/665") AnnotationAssertion( ) AnnotationAssertion( "BTO:0003158") AnnotationAssertion( "EMAPA:29794") AnnotationAssertion( "FMA:19574") AnnotationAssertion( "MA:0002422") AnnotationAssertion(Annotation( "FMA:19574") "anterior lobe of prostate") AnnotationAssertion( "anterior lobe of prostate gland") AnnotationAssertion(Annotation( "EMAPA:29794") "anterior prostate gland") AnnotationAssertion(Annotation( "FMA:19574") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "commissura prostatae") AnnotationAssertion( "commissure of prostate") AnnotationAssertion( "isthmus of prostate") AnnotationAssertion( "isthmus of prostate gland") AnnotationAssertion(Annotation( "FMA:19574") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "isthmus prostatae") AnnotationAssertion( "prostate gland anterior lobe") AnnotationAssertion( "prostatic isthmus") AnnotationAssertion( "uberon") AnnotationAssertion( "anterior prostate") AnnotationAssertion( "UBERON:0001329") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "prostate gland anterior lobe") SubClassOf( ) DisjointClasses(Annotation( "lexical"^^xsd:string) ) # Class: (pampiniform plexus) AnnotationAssertion(Annotation( ) "The pampiniform plexus is a network of many small veins found in the male spermatic cord. It is formed by the union of multiple spermatic veins from the back of the testis and tributaries from the epididymis. The veins of the plexus ascend along the cord in front of the ductus deferens. Below the subcutaneous inguinal ring they unite to form three or four veins, which pass along the inguinal canal, and, entering the abdomen through the abdominal inguinal ring, coalesce to form two veins. These again unite to form a single vein, the testicular vein, which opens on the right side into the inferior vena cava, at an acute angle, and on the left side into the left renal vein, at a right angle. The pampinoform plexus forms the chief mass of the cord. In addition to its function in venous return from the testes, the pampiniform plexus also plays a role in the temperature regulation of the testes. It acts as a heat exchanger, cooling blood in adjacent arteries. An abnormal enlargement of the pampiniform plexus is a medical condition called varicocele. [WP,unvetted].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37385") AnnotationAssertion( "FMA:19607") AnnotationAssertion( "MA:0001866") AnnotationAssertion( "pampiniform venous plexus") AnnotationAssertion( "plexus of veins of fascia of prostate") AnnotationAssertion(Annotation( "FMA:19607") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "plexus venosus pampiniformis") AnnotationAssertion( "venous plexus of fascia of prostate") AnnotationAssertion( "venous plexus of fascia of prostate gland") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001330") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "pampiniform plexus") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/a/af/Gray1147.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (skin of penis) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A zone of skin that is part of a penis [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:35675") AnnotationAssertion( "FMA:19638") AnnotationAssertion( "MA:0002727") AnnotationAssertion(Annotation( "FMA:19638") "penile skin") AnnotationAssertion( "penis skin") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "penis zone of skin") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "zone of skin of penis") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001331") AnnotationAssertion(rdfs:label "skin of penis") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (prepuce of penis) AnnotationAssertion(Annotation( ) Annotation( ) "A retractable double-layered fold of skin and mucous membrane that covers the glans penis and protects the urinary meatus when the penis is not erect.") AnnotationAssertion(Annotation( ) Annotation( "MA:0000407") "prepuce") AnnotationAssertion(Annotation( "HP:0100587") "preputium") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0001113") AnnotationAssertion( "CALOHA:TS-0383") AnnotationAssertion( "EFO:0001664") AnnotationAssertion( "EMAPA:18989") AnnotationAssertion( "EV:0100109") AnnotationAssertion( "FMA:19639") AnnotationAssertion( "MA:0000407") AnnotationAssertion( "NCIT:C33049") AnnotationAssertion( "OpenCyc:Mx4rvVjlTZwpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Male_Prepuce") "UMLS:C0227952") AnnotationAssertion(Annotation( "FMA:19639") "penile prepuce") AnnotationAssertion(Annotation( "EMAPA:18989") "prepuce of male") AnnotationAssertion(Annotation( "FMA:19639") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "preputium penis") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:19639") "foreskin") AnnotationAssertion(Annotation( ) Annotation( ) "praeputium") AnnotationAssertion(Annotation( ) Annotation( ) "prepucium") AnnotationAssertion( "UBERON:0001332") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "prepuce of penis") AnnotationAssertion( "Foreskin:CloseupV2.jpg"^^xsd:anyURI) AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/en/thumb/c/cc/Foreskin2.jpg/200px-Foreskin2.jpg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (male urethra) AnnotationAssertion(Annotation( ) "A urethra that is part of a male reproductive system.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0004089") AnnotationAssertion( "EMAPA:18692") AnnotationAssertion( "FMA:19668") AnnotationAssertion( "MA:0002640") AnnotationAssertion( "NCIT:C33050") AnnotationAssertion(Annotation( "ncithesaurus:Male_Urethra") "UMLS:C0458452") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001333") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "male urethra") AnnotationAssertion( "Female:anatomy.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (female urethra) AnnotationAssertion(Annotation( ) "A urethra that is part of a female reproductive system.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0004088") AnnotationAssertion( "EMAPA:28747") AnnotationAssertion( "FMA:19669") AnnotationAssertion( "MA:0002637") AnnotationAssertion( "NCIT:C32591") AnnotationAssertion(Annotation( "ncithesaurus:Female_Urethra") "UMLS:C0458485") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0004088") "urethra feminina") AnnotationAssertion(Annotation( "BTO:0004088") "urethra muliebris") AnnotationAssertion( "UBERON:0001334") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "female urethra") AnnotationAssertion( "Female:anatomy.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (prostatic urethra) AnnotationAssertion(Annotation( "MGI:anna"^^xsd:string) Annotation( "MP:0011777") "The widest and most dilatable part of the male urethra canal which runs almost vertically through the prostate from its base to its apex, lying nearer its anterior than its posterior surface; this portion of the urethral canal is spindle-shaped, being wider in the middle than at either extremity, and narrowest below, where it joins the membranous portion; it is lined by transitional epithelium and contains in its posterior wall, or floor, the orifices of the prostatic utricle, ejaculatory ducts, and prostatic ducts, collectively known as the seminal colliculus (aka verumontanum).") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0003163") AnnotationAssertion( "EMAPA:30942") AnnotationAssertion( "FMA:19673") AnnotationAssertion( "MA:0002646") AnnotationAssertion( "NCIT:C13101") AnnotationAssertion(Annotation( "ncithesaurus:Prostatic_Portion_of_the_Male_Urethra") "UMLS:C0458450") AnnotationAssertion(Annotation( "MP:0011777") "male prostatic urethra") AnnotationAssertion(Annotation( ) Annotation( ) "pars prostatica urethrae") AnnotationAssertion(Annotation( "MP:0011777") "pars prostatica urethrae") AnnotationAssertion(Annotation( "MP:0011777") "prostatic part of male urethra") AnnotationAssertion( "prostatic part of urethra") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0003163") "pars prostatica urethrae") AnnotationAssertion( "UBERON:0001335") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "prostatic urethra") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/d/d7/Gray1142.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) Annotation( "MA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (membranous urethra of male or female) AnnotationAssertion(Annotation( "MA"^^xsd:string) "MA class sex-neutral") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37542") AnnotationAssertion( "MA:0002647") AnnotationAssertion( "intermediate part of urethra") AnnotationAssertion( "intermediate urethra") AnnotationAssertion( "membranous part of urethra") AnnotationAssertion(Annotation( "MA:0002647") Annotation( ) "membranous urethra") AnnotationAssertion(Annotation( "FMA:19674") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "pars intermedia urethrae") AnnotationAssertion( "pars membranacea (urethrae)") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001336") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "membranous urethra of male or female") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (spongiose part of urethra) AnnotationAssertion(Annotation( "MGI:anna"^^xsd:string) Annotation( "MP:0011779") "The longest part of the male urethra contained in the corpus spongiosum and extending from the end of the membranous portion to the external urethral orifice; commencing below the inferior fascia of the urogenital diaphragm it passes forward and upward to the front of the symphysis pubis; and then, in the flaccid condition of the penis, it bends downward and forward; while narrow and of uniform size in the body of the penis, it is dilated behind, within the bulb, and again anteriorly within the glans penis, where it forms the fossa navicularis urethrae; the spongy urethra is lined by pseudostratified columnar epithelium proximally, and by stratified squamous epithelium distally.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:30944") AnnotationAssertion( "FMA:19675") AnnotationAssertion( "MA:0002644") AnnotationAssertion(Annotation( "MP:0011779") "cavernous portion of male urethra") AnnotationAssertion(Annotation( "MP:0011779") "male spongiose urethra") AnnotationAssertion( "male spongy urethra") AnnotationAssertion(Annotation( "MP:0011779") "pars cavernosa urethrae") AnnotationAssertion(Annotation( "FMA:19675") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "pars spongiosa") AnnotationAssertion(Annotation( "FMA:19675") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "pars spongiosa (urethra masculina)") AnnotationAssertion(Annotation( "MP:0011779") "pars spongiosa urethrae masculinae") AnnotationAssertion(Annotation( "MP:0011779") "penile urethra") AnnotationAssertion(Annotation( "MP:0011779") "spongiose urethra") AnnotationAssertion( "spongy urethra (male)") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001337") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "spongiose part of urethra") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/d/d7/Gray1142.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (urethral gland) AnnotationAssertion(Annotation( "MP:anna"^^xsd:string) "Any of the numerous small mucous-secreting glands located in the wall of the male or female urethra that help protect the epithelium from the corrosive urine.") AnnotationAssertion(Annotation( "NCIT") "NCIT:C12339 paraurethral gland belongs here") AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37784") AnnotationAssertion( "FMA:19683") AnnotationAssertion( "MA:0001688") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "gland of urethra") AnnotationAssertion( "urethra gland") AnnotationAssertion( "urethra gland (male or female)") AnnotationAssertion( "urethral mucuous gland") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001338") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "urethral gland") SubClassOf(Annotation( "MP"^^xsd:string) ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (ischiocavernosus muscle) AnnotationAssertion(Annotation( ) "The ischiocavernosus muscle is a muscle just below the surface of the perineum, present in both men and women. [WP,unvetted].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37455") AnnotationAssertion( "FMA:19730") AnnotationAssertion( "MA:0002330") AnnotationAssertion( "NCIT:C52946") AnnotationAssertion(Annotation( "ncithesaurus:Ischiocavernosus") "UMLS:C0224401") AnnotationAssertion(Annotation( ) Annotation( ) "musculus ishiocavernosus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "erector penis") AnnotationAssertion(Annotation( ) "ischiocavernosi") AnnotationAssertion(Annotation( ) "ischiocavernosus") AnnotationAssertion(Annotation( ) "ischiocavernous muscle") AnnotationAssertion(Annotation( ) "ishiocavernosus") AnnotationAssertion(Annotation( ) "ishiocavernosus muscle") AnnotationAssertion( "UBERON:0001339") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "ischiocavernosus muscle") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/c/c0/Ischiocavernosus-female.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (dorsal artery of penis) AnnotationAssertion(Annotation( ) "The Dorsal Artery of the Penis ascends between the crus penis and the pubic symphysis, and, piercing the inferior fascia of the urogenital diaphragm, passes between the two layers of the suspensory ligament of the penis, and runs forward on the dorsum of the penis to the glans, where it divides into two branches, which supply the glans and prepuce. On the penis, it lies between the dorsal nerve and deep dorsal vein, the former being on its lateral side. It supplies the integument and fibrous sheath of the corpus cavernosum penis, sending branches through the sheath to anastomose with the deep artery of the penis. [WP,unvetted].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0005088") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37080") AnnotationAssertion( "FMA:19795") AnnotationAssertion( "MA:0001946") AnnotationAssertion(Annotation( "BTO:0005088") "arteria dorsalis penis") AnnotationAssertion(Annotation( "FMA:19795") "dorsal penile artery") AnnotationAssertion(Annotation( "MA:0001946") "dorsal penis artery") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0005088") "dorsal artery of the penis") AnnotationAssertion( "UBERON:0001340") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "dorsal artery of penis") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/f/f6/Gray1155.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "BTO"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (lesser sac) AnnotationAssertion(Annotation( ) "The lesser sac, also known as the omental bursa, is the cavity in the abdomen that is formed by the lesser and greater omentum. Usually found in mammals, it is connected with the greater sac via the epiploic foramen (also known as the Foramen of Winslow). [WP,unvetted].") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000458") Annotation( "VHOG"^^xsd:string) Annotation( ) "The lesser sac of the peritoneum. Part of the peritoneal cavity behind the liver, lesser omentum and stomach. It lies across the transverse mesocolon and extends into the greater omentum. [Dorian_AF, Elsevier's_encyclopaedic_dictionary_of_medicine, Part_B:_Anatomy_(1988)_Amsterdam_etc.:_Elsevier][VHOG]") AnnotationAssertion( "In mammals, it is not uncommon for the lesser sac to contain considerable amounts of fat. In human anatomy, the wall of the stomach, pancreas and splenic artery are a part of the wall of the lesser sac") AnnotationAssertion( "The lesser sac is embryologically formed from an infolding of the greater omentum. The open end of the infolding, known as the epiploic foramen, is usually proximal to the stomach") AnnotationAssertion(Annotation( "EHDAA2"^^xsd:string) "classified as a cavity in EHDAA2, so this truly corresponds to FMA 'Cavity of lesser sac' - we hedge for now; todo - treat same as greater sac") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0001296") AnnotationAssertion( "EHDAA2:0004554") AnnotationAssertion( "EHDAA:2335") AnnotationAssertion( "EMAPA:16889") AnnotationAssertion( "FMA:19800") AnnotationAssertion( "MA:0000445") AnnotationAssertion( "NCIT:C81014") AnnotationAssertion(Annotation( "ncithesaurus:Omental_Bursa") "UMLS:C0230212") AnnotationAssertion( "VHOG:0000458") AnnotationAssertion(Annotation( "FMA:19800") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "bursa omentalis") AnnotationAssertion( "omental bursa") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001341") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "lesser sac") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/c/c5/Peritoneum.svg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (mesovarium) AnnotationAssertion(Annotation( ) Annotation( "VHOG:0001566") "The mesentery that suspends the ovary from the dorsal wall of the coelom[VHOG].") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0010531") Annotation( "AAO"^^xsd:string) Annotation( "AAO:BJB"^^xsd:string) "Anatomical structure consisting of a membrane which suspends the ovaries from the mesial side of the kidney.[AAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001566") Annotation( "VHOG"^^xsd:string) Annotation( ) "The mesentery that suspends the ovary from the dorsal wall of the coelom. [Evolution, Fourth_Edition_(2006)_McGraw-Hill, Function, Vertebrates:_Comparative_Anatomy, p.560, see_Kardong_KV][VHOG]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010531") AnnotationAssertion( "EMAPA:17961") AnnotationAssertion( "FMA:19815") AnnotationAssertion( "MA:0003236") AnnotationAssertion( "NCIT:C92440") AnnotationAssertion( "TAO:0000333") AnnotationAssertion(Annotation( "ncithesaurus:Mesovarian_Ligament") "UMLS:C0230310") AnnotationAssertion( "VHOG:0001566") AnnotationAssertion( "ZFA:0000333") AnnotationAssertion( "uberon") AnnotationAssertion( "mesovarian ligament") AnnotationAssertion( "UBERON:0001342") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "mesovarium") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/e/e7/Gray1111.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (seminiferous tubule of testis) AnnotationAssertion(Annotation( ) Annotation( "ISBN:0-683-40008-8"^^xsd:string) Annotation( "MGI:csmith"^^xsd:string) Annotation( "MP:0002216") "The tubules in the testes where spermatogenesis occurs.") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0010399") Annotation( "AAO"^^xsd:string) Annotation( "AAO:BJB"^^xsd:string) "Any of the coiled tubules located in the testes in which spermatozoa are produced.[AAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001363") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( ) "One of two or three twisted curved tubules in each lobule of the testis in which spermatogenesis occurs. [TFD][VHOG]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001363") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0030223693 Liem KF, Bemis WE, Walker WF, Grande L, Functional Anatomy of the Vertebrates: An Evolutionary Perspective (2001) p.688 and Figure 21-28") "Frogs among amphibians and the amniotes have males with testes that are composed of seminiferous tubules, which differ from ampullae in being long, highly convoluted ductules.[well established][VHOG]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010399") AnnotationAssertion( "BTO:0001235") AnnotationAssertion( "CALOHA:TS-1239") AnnotationAssertion( "EFO:0001404") AnnotationAssertion( "EMAPA:18685") AnnotationAssertion( "EMAPA:31476") AnnotationAssertion( "EV:0100380") AnnotationAssertion( "FMA:19825") AnnotationAssertion( "GAID:400") AnnotationAssertion( "MA:0000412") AnnotationAssertion( "MAT:0000503") AnnotationAssertion( "MESH:D012671") AnnotationAssertion( "NCIT:C13047") AnnotationAssertion( "NCIT:C34293") AnnotationAssertion(Annotation( "ncithesaurus:Seminiferous_Tubule") "UMLS:C0036630") AnnotationAssertion(Annotation( "ncithesaurus:Seminiferous_Cord") "UMLS:C1519236") AnnotationAssertion( "VHOG:0001363") AnnotationAssertion( "XAO:0003088") AnnotationAssertion(Annotation( "EMAPA:18685") "seminiferous cord") AnnotationAssertion( "seminiferous tubule") AnnotationAssertion( "testis - seminiferous tubule") AnnotationAssertion( "tubuli seminiferi") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "tubuli seminiferi") AnnotationAssertion( "UBERON:0001343") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "seminiferous tubule of testis") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/4/49/Seminiferous_tubule_and_sperm_low_mag.jpg"^^xsd:anyURI) AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/6/6a/Gray1145.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "Wikipedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (epithelium of vagina) AnnotationAssertion(Annotation( "MP:0001140") "The epithelial layer of the vagina.") AnnotationAssertion(Annotation( "FMA"^^xsd:string) "FMA: nonkeratinizing stratified squamous epithelium; BTO: Vaginal epithelium is stratified squamous epithelium having a thickness of 15-200 microns; MA has single subclass (squamous)") AnnotationAssertion( ) AnnotationAssertion( "BTO:0000422") AnnotationAssertion( "CALOHA:TS-1325") AnnotationAssertion( "EMAPA:30991") AnnotationAssertion( "FMA:19978") AnnotationAssertion( "MA:0001730") AnnotationAssertion( "NCIT:C49313") AnnotationAssertion(Annotation( "ncithesaurus:Vaginal_Epithelium") "UMLS:C0920840") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelial tissue of vagina") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "vagina epithelial tissue") AnnotationAssertion( "vagina epithelium") AnnotationAssertion( "vaginal epithelium") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0000422") "epithelium, vaginal") AnnotationAssertion( "UBERON:0001344") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "epithelium of vagina") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete fornix) AnnotationAssertion( "UBERON:0000051") AnnotationAssertion( "UBERON:0000052") AnnotationAssertion( ) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001345") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "obsolete fornix") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (vaginal hymen) AnnotationAssertion(Annotation( ) "A membrane that surrounds or partially covers the vaginal opening.") AnnotationAssertion(Annotation( "MESH:A05.360.319.779.479") "hymen") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37795") AnnotationAssertion( "FMA:20005") AnnotationAssertion( "MA:0002465") AnnotationAssertion( "MESH:D006924") AnnotationAssertion( "NCIT:C32750") AnnotationAssertion(Annotation( "ncithesaurus:Hymen") "UMLS:C0020412") AnnotationAssertion(Annotation( "FMA:20005") "hymen of vagina") AnnotationAssertion( "hymen vaginae") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "hymen vaginae") AnnotationAssertion(Annotation( ) "vaginal corona") AnnotationAssertion( "UBERON:0001346") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "vaginal hymen") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/2/26/Gray1229.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (white adipose tissue) AnnotationAssertion(Annotation( "ISBN:0-683-40008-8"^^xsd:string) Annotation( "MP:0005670") "Connective tissue consisting of fat-storing cells and arranged in lobular groups or along minor blood vessels[MP,modified].") AnnotationAssertion(Annotation( "FMA"^^xsd:string) "Adipose tissue, cells of which contain a single large lipid droplet.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0001456") AnnotationAssertion( "CALOHA:TS-1119") AnnotationAssertion( "EFO:0000813") AnnotationAssertion( "EMAPA:35926") AnnotationAssertion( "FMA:20117") AnnotationAssertion( "MA:0000058") AnnotationAssertion( "MAT:0000199") AnnotationAssertion( "MIAA:0000199") AnnotationAssertion( "NCIT:C33889") AnnotationAssertion(Annotation( "ncithesaurus:White_Adipose_Tissue") "UMLS:C1704223") AnnotationAssertion( "adipocytus unigutturalis") AnnotationAssertion( "textus adiposus albus") AnnotationAssertion( "unilocular adipose tissue") AnnotationAssertion( "white fat") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "textus adiposus albus") AnnotationAssertion( "UBERON:0001347") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "white adipose tissue") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (brown adipose tissue) AnnotationAssertion(Annotation( "MGI:smb"^^xsd:string) Annotation( "MP:0011698") "A thermogenic form of adipose tissue that is composed of brown adipocytes[MP,modified].") AnnotationAssertion(Annotation( "FMA"^^xsd:string) "Adipose tissue, cells of which contain multiple small lipid droplets.[FMA]") AnnotationAssertion( "especially abundant in newborns and in hibernating mammals") AnnotationAssertion( "thermogenesis") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0000156") AnnotationAssertion( "CALOHA:TS-0099") AnnotationAssertion( "EFO:0000812") AnnotationAssertion( "EMAPA:19209") AnnotationAssertion( "FMA:20118") AnnotationAssertion( "GAID:921") AnnotationAssertion( "MA:0000057") AnnotationAssertion( "MAT:0000198") AnnotationAssertion( "MESH:D002001") AnnotationAssertion( "MIAA:0000198") AnnotationAssertion( "NCIT:C32235") AnnotationAssertion(Annotation( "ncithesaurus:Brown_Adipose_Tissue") "UMLS:C0006298") AnnotationAssertion( "adipocytus multigutturalis") AnnotationAssertion( "brown fat") AnnotationAssertion( "multilocular adipose tissue") AnnotationAssertion( "textus adiposus fuscus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "BAT") AnnotationAssertion(Annotation( ) Annotation( ) "textus adiposus fuscus") AnnotationAssertion( "UBERON:0001348") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "brown adipose tissue") AnnotationAssertion( "Brownfat:PETCT.jpg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (externally connecting tube lumen) AnnotationAssertion(Annotation( "FMA:20192") "Anatomical cavity that connects an organ cavity, organ cavity subdivision or cavity of body part subdivision to the exterior, completely or partially surrounded by organs or organ parts that are lined by epithelium. Examples: preputial cavity, vestibule of vagina.[FMA].") AnnotationAssertion( "FMA:20192") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:20192") "vestibule") AnnotationAssertion( "UBERON:0001349") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "externally connecting tube lumen") SubClassOf( ) DisjointClasses( ) # Class: (lacrimal sac) AnnotationAssertion(Annotation( "MGI:anna"^^xsd:string) "The upper dilated end of the nasolacrimal duct that is lodged in a deep groove formed by the lacrimal bone and frontal process of the maxilla; it connects the lacrimal canaliculi, which drain tears from the eye's surface, and the nasolacrimal duct, which conveys this fluid into the nasal cavity; like the nasolacrimal duct, the sac is lined by stratified columnar epithelium with mucus-secreting goblet cells, and is surrounded by connective tissue.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:20289") AnnotationAssertion( "MA:0001298") AnnotationAssertion( "NCIT:C32909") AnnotationAssertion(Annotation( "ncithesaurus:Lacrimal_Sac") "UMLS:C0229289") AnnotationAssertion( "lachrymal sac") AnnotationAssertion( "lacrymal sac") AnnotationAssertion(Annotation( ) Annotation( ) "saccus lacrimalis") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001351") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "lacrimal sac") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/c/cf/Gray896.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (external acoustic meatus) AnnotationAssertion(Annotation( ) "A tube running from the outer ear to the middle ear. The human ear canal extends from the pinna to the eardrum and is about 26 mm in length and 7 mm in diameter.") AnnotationAssertion( "consider revisiting superclass after refinement of CARO/EAO, conduit may not be quite correct.") AnnotationAssertion( "tympanic ring, which serves as support for the tympanic membrane, directs invagination of the first pharingeal cleft ectoderm to form the external acoustic meatus (EAM), which provides the outer layer of the membrane[PMID 11237469]") AnnotationAssertion(Annotation( "FMA"^^xsd:string) "subdivision of head in FMA.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0000460") AnnotationAssertion( "EHDAA:8975") AnnotationAssertion( "EMAPA:17588") AnnotationAssertion( "EV:0100356") AnnotationAssertion( "FMA:61734") AnnotationAssertion( "GAID:864") AnnotationAssertion( "MA:0000260") AnnotationAssertion( "MESH:D004424") AnnotationAssertion( "NCIT:C12498") AnnotationAssertion( "OpenCyc:Mx4rvli-nZwpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:External_Acoustic_Meatus") "UMLS:C0013444") AnnotationAssertion( "VHOG:0000977") AnnotationAssertion( "galen:ExternalAuditoryMeatus") AnnotationAssertion( "auditory canal") AnnotationAssertion(Annotation( ) "ear canal") AnnotationAssertion(Annotation( "FMA:61734") "external acoustic tube") AnnotationAssertion( "external auditory canal") AnnotationAssertion(Annotation( "FMA:61734") "external auditory tube") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "EHDAA2:0000460") "auditory meatus") AnnotationAssertion( "external auditory meatus") AnnotationAssertion( "UBERON:0001352") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "external acoustic meatus") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (anal region) AnnotationAssertion(Annotation( ) "The anus and surrounding regions. Encompasses both internal and external regions, where present.") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000395") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0521617147 Stevens CE and Hume ID, Comparative physiology of the vertebrate digestive system (2004) p.11") "Although all vertebrates have a digestive tract and accessory glands, various parts of this system are not necessarily homologous, analogous, or even present in all species. Therefore, broad comparisons can be best made under the listings of headgut, foregut, midgut, pancreas and biliary system, hindgut.[uncertain][VHOG]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EFO:0000847") AnnotationAssertion( "EHDAA2:0000122") AnnotationAssertion( "EHDAA:2931") AnnotationAssertion( "EMAPA:16831") AnnotationAssertion( "MA:0000329") AnnotationAssertion( "MAT:0000042") AnnotationAssertion( "MIAA:0000042") AnnotationAssertion( "NCIT:C32069") AnnotationAssertion(Annotation( "ncithesaurus:Anal_Region") "UMLS:C0230120") AnnotationAssertion( "VHOG:0000395") AnnotationAssertion( "WBbt:0006919") AnnotationAssertion( "uberon") AnnotationAssertion( "posterior") AnnotationAssertion( "posterior end of organism") AnnotationAssertion( "UBERON:0001353") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "anal region") AnnotationAssertion(rdfs:seeAlso "https://github.com/obophenotype/uberon/issues/507"^^xsd:anyURI) AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/f/fb/Gray408.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) SubClassOf(Annotation( "cjm") ObjectSomeValuesFrom( )) # Class: (inferior epigastric artery) AnnotationAssertion(Annotation( ) Annotation( ) "The artery that arises from the external iliac artery and anastomoses with the superior epigastric artery.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:18751") AnnotationAssertion( "FMA:20686") AnnotationAssertion( "MA:0001978") AnnotationAssertion( "NCIT:C52861") AnnotationAssertion( "OpenCyc:Mx4rdBvQc6gOEdudWQACs5b6Bw") AnnotationAssertion(Annotation( "ncithesaurus:Inferior_Epigastric_Artery") "UMLS:C0226401") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "arteria epigastrica inferior") AnnotationAssertion( "UBERON:0001354") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "inferior epigastric artery") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/6/6f/Gray547.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (deep femoral artery) AnnotationAssertion(Annotation( ) "The profunda femoris artery (also known as the deep femoral artery, or the deep artery of the thigh) is a branch of the femoral artery that, as its name suggests, travels more deeply (posteriorly) than the rest of the femoral artery. [WP,unvetted].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37216") AnnotationAssertion( "FMA:20741") AnnotationAssertion( "MA:0002027") AnnotationAssertion( "NCIT:C32436") AnnotationAssertion(Annotation( "ncithesaurus:Deep_Femoral_Artery") "UMLS:C0226455") AnnotationAssertion( "arteria profunda femoris") AnnotationAssertion( "profunda femoris artery") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001355") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "deep femoral artery") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/8/8b/Gray548.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (medial circumflex femoral artery) AnnotationAssertion(Annotation( ) "The medial circumflex femoral artery (internal circumflex artery, medial femoral circumflex artery) is an artery in the upper thigh that helps supply blood to the neck of the femur. [WP,unvetted].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37670") AnnotationAssertion( "FMA:20799") AnnotationAssertion( "MA:0001996") AnnotationAssertion( "medial femoral circumflex artery") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "arteria circumflexa femoris medialis") AnnotationAssertion( "UBERON:0001356") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "medial circumflex femoral artery") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/c/c5/Circumflex_femoral_arteries.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (inferior rectal artery) AnnotationAssertion(Annotation( ) "The inferior rectal artery (inferior hemorrhoidal artery) is an artery that supplies blood to the lower half of the anal canal. [WP,unvetted].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37087") AnnotationAssertion( "FMA:20824") AnnotationAssertion( "MA:0001979") AnnotationAssertion( "NCIT:C52938") AnnotationAssertion(Annotation( "ncithesaurus:Inferior_Rectal_Artery") "UMLS:C0226393") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "arteria haemorrhoidalis inferior") AnnotationAssertion(Annotation( ) Annotation( ) "arteria rectalis inferior") AnnotationAssertion(Annotation( ) "inferior haemorrhoidal artery") AnnotationAssertion(Annotation( ) "inferior hemorrhoidal arteries") AnnotationAssertion(Annotation( ) "inferior hemorrhoidal artery") AnnotationAssertion(Annotation( ) "inferior hemorrhoidal branches") AnnotationAssertion(Annotation( ) "inferior hemorrhoidal vessels") AnnotationAssertion(Annotation( ) "inferior rectal arteries") AnnotationAssertion( "UBERON:0001357") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "inferior rectal artery") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/6/6d/Gray542.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "FMA-abduced-lr"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA-abduced-lr"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (perineal artery) AnnotationAssertion(Annotation( ) "The perineal artery (superficial perineal artery) arises from the internal pudendal artery, and turns upward, crossing either over or under the Transversus perinæi superficialis, and runs forward, parallel to the pubic arch, in the interspace between the Bulbocavernosus and Ischiocavernosus, both of which it supplies, and finally divides into several posterior scrotal branches which are distributed to the skin and dartos tunic of the scrotum. As it crosses the Transversus perinæi superficialis it gives off the transverse perineal artery which runs transversely on the cutaneous surface of the muscle, and anastomoses with the corresponding vessel of the opposite side and with the perineal and inferior hemorrhoidal arteries. It supplies the Transversus perinæi superficialis and the structures between the anus and the urethral bulb. [WP,unvetted].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37107") AnnotationAssertion( "FMA:20836") AnnotationAssertion( "MA:0002017") AnnotationAssertion( "NCIT:C52994") AnnotationAssertion(Annotation( "ncithesaurus:Perineal_Artery") "UMLS:C0226394") AnnotationAssertion(Annotation( ) "superficial perineal artery") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "arteria perinei") AnnotationAssertion( "UBERON:0001358") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "perineal artery") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/6/6d/Gray542.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (cerebrospinal fluid) AnnotationAssertion(Annotation( ) "A clear, colorless, bodily fluid, that occupies the subarachnoid space and the ventricular system around and inside the brain and spinal cord.") AnnotationAssertion( "many sources state the CP as sole producer of CSF, but this is disputed [DOI:10.1007/s11064-015-1581-6]") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0002184") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "Portion of organism substance that is a clear fluid that occupies the subarachnoid space and the ventricular system around and inside the brain.[TAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001278") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "DOI:10.1021/pr050213t Parada C, Gato A, Bueno D, Mammalian embryonic cerebrospinal fluid proteome has greater apolipoprotein and enzyme pattern complexity than the avian proteome. Journal of Proteome Research (2005)") "In vertebrates, at early stages of Central Nervous System (CNS) development, the architecture of the brain primordium reveals the presence of the cavity of brain vesicles, which is filled by Embryonic Cerebro-Spinal Fluid (E-CSF). (...) Rat and chick E-CSF proteomes are similar, although rat is more complex in certain groups of proteins, e.g., apolipoproteins, which may be involved in the control of neural diversity, and has soluble enzymes present, just like adult human CSF, but unlike chick E-CSF, revealing phylogenetic brain differences between these groups of vertebrates.[uncertain][VHOG]") AnnotationAssertion(Annotation( "EHDAA2"^^xsd:string) "EHDAA2 models this as developing from CP, which is wrong") AnnotationAssertion(Annotation( "FMA"^^xsd:string) "the FMA def states that this is subarachnoid spaces only. ZFA def states subarachnoid spaces and brain ventricles, but not SC (and has part_of to brain). Circulation: It circulates from the lateral ventricles to the foramen of Monro (Interventricular foramen), third ventricle, aqueduct of Sylvius (Cerebral aqueduct), fourth ventricle, foramen of Magendie (Median aperture) and foramina of Luschka (Lateral apertures), subarachnoid space over brain and spinal cord. It should be noted that the CSF moves in a pulsatile manner throughout the CSF system with nearly zero net flow. CSF is reabsorbed into venous sinus blood via arachnoid granulations.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:1798") AnnotationAssertion( "BTO:0000237") AnnotationAssertion( "CALOHA:TS-0130") AnnotationAssertion( "EFO:0000329") AnnotationAssertion( "EHDAA2:0004441") AnnotationAssertion( "ENVO:02000029") AnnotationAssertion( "EV:0100311") AnnotationAssertion( "FMA:20935") AnnotationAssertion( "GAID:1181") AnnotationAssertion( "MA:0002503") AnnotationAssertion( "MAT:0000499") AnnotationAssertion( "MESH:A12.207.268") AnnotationAssertion( "NCIT:C12692") AnnotationAssertion( "TAO:0002184") AnnotationAssertion(Annotation( "BIRNLEX:1798") "UMLS:C0007806") AnnotationAssertion(Annotation( "ncithesaurus:Cerebrospinal_Fluid") "UMLS:C0007806") AnnotationAssertion( "VHOG:0001278") AnnotationAssertion( "ZFA:0001626") AnnotationAssertion( "CSF") AnnotationAssertion(Annotation( "ZFA:0001626") "cerebral spinal fluid") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "liquor cerebrospinalis") AnnotationAssertion(Annotation( "BTO:0000237") "spinal fluid") AnnotationAssertion( "UBERON:0001359") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "cerebrospinal fluid") SubClassOf(Annotation( "Wikipedia"^^xsd:string) ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "see notes") Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (deep circumflex iliac vein) AnnotationAssertion(Annotation( ) "A vein that corresponds to the deep circumflex iliac artery and empties near or in a common trunk with the inferior epigastric vein into the external iliac vein; deep circumflex iliac vein.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37511") AnnotationAssertion( "FMA:21182") AnnotationAssertion( "MA:0002099") AnnotationAssertion( "circumflex iliac vein") AnnotationAssertion( "deep iliac circumflex vein") AnnotationAssertion( "iliac circumflex vein") AnnotationAssertion( "vena circumflexa iliaca profunda") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "vena circumflexa ilium profunda") AnnotationAssertion( "UBERON:0001360") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "deep circumflex iliac vein") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/b/bd/Gray585.png"^^xsd:anyURI) SubClassOf( ) # Class: (femoral vein) AnnotationAssertion(Annotation( ) "In the human body, the femoral vein is a blood vessel that accompanies the femoral artery in the femoral sheath. It begins at the adductor canal (also known as Hunter's canal) and is a continuation of the popliteal vein. It ends at the inferior margin of the inguinal ligament, where it becomes the external iliac vein. [WP,unvetted].") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0010237") Annotation( "AAO"^^xsd:string) Annotation( "AAO:BJB"^^xsd:string) "Either of the primary veins in the hindlimbs which collect blood from the hindlimb region.[AAO]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010237") AnnotationAssertion( "EMAPA:17876") AnnotationAssertion( "FMA:21185") AnnotationAssertion( "GAID:533") AnnotationAssertion( "MA:0002118") AnnotationAssertion( "MESH:D005268") AnnotationAssertion( "NCIT:C12716") AnnotationAssertion( "OpenCyc:Mx4rwFXTLJwpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Femoral_Vein") "UMLS:C0015809") AnnotationAssertion( "galen:FemoralVein") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "vena femoralis") AnnotationAssertion( "UBERON:0001361") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "femoral vein") SubClassOf( ) SubClassOf( ) # Class: (perineal vein) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37179") AnnotationAssertion( "FMA:21246") AnnotationAssertion( "MA:0002193") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001362") AnnotationAssertion(rdfs:label "perineal vein") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA/obol"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (great saphenous vein) AnnotationAssertion(Annotation( ) "The great saphenous vein (GSV), also greater saphenous vein, is the large (subcutaneous) superficial vein of the leg and thigh. The terms 'safaina' (Greek) and 'el safin' (Arabic) have both been claimed as the origin for the word 'saphenous'. [WP,unvetted].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0003271") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37147") AnnotationAssertion( "FMA:21376") AnnotationAssertion( "MA:0002216") AnnotationAssertion( "NCIT:C33004") AnnotationAssertion(Annotation( "ncithesaurus:Long_Saphenous_Vein") "UMLS:C0392907") AnnotationAssertion( "galen:GreatSaphenousVein") AnnotationAssertion( "galen:GreaterSaphenousVein") AnnotationAssertion( "greater saphenous vein") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0003271") "large saphenous vein") AnnotationAssertion( "long saphenous vein") AnnotationAssertion(Annotation( ) Annotation( ) "vena saphena magna") AnnotationAssertion( "UBERON:0001363") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "great saphenous vein") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/5/51/Great_saphenous_vein.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA/obol"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (obsolete circumpennate) AnnotationAssertion( "FMA:21431") AnnotationAssertion( "ZFA:0000271") AnnotationAssertion( "OpenCyc:Mx4rvVjBSZwpEbGdrcN5Y29ycA") AnnotationAssertion( "radial") AnnotationAssertion(Annotation( "FMA:21431") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "radialis") AnnotationAssertion( "uberon") AnnotationAssertion( "radials") AnnotationAssertion( "UBERON:0001364") AnnotationAssertion(rdfs:label "obsolete circumpennate") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (sacro-iliac joint) AnnotationAssertion(Annotation( ) "The joint in the bony pelvis between the sacrum and the ilium of the pelvis, which are joined by strong ligaments.") AnnotationAssertion( "In humans, the sacrum supports the spine and is supported in turn by an ilium on each side") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:19300") AnnotationAssertion( "FMA:21440") AnnotationAssertion( "GAID:268") AnnotationAssertion( "MA:0001506") AnnotationAssertion( "MESH:D012446") AnnotationAssertion( "NCIT:C33507") AnnotationAssertion(Annotation( "ncithesaurus:Sacroiliac_Joint") "UMLS:C0036036") AnnotationAssertion( "articulatio sacro-iliaca") AnnotationAssertion( "sacroiliac joint") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001365") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "sacro-iliac joint") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/5/5f/Gray319.png"^^xsd:anyURI) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (parietal peritoneum) AnnotationAssertion(Annotation( ) Annotation( ) "The outer layer of peritoneum that is attached to the abdominal and pelvic walls.") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0010816") Annotation( "AAO"^^xsd:string) Annotation( "AAO:JMG") "Peritoneum attached to the abdominal wall.[AAO]") AnnotationAssertion( "UBERON:0004459") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010816") AnnotationAssertion( "EMAPA:16591") AnnotationAssertion( "FMA:21451") AnnotationAssertion( "TAO:0005131") AnnotationAssertion( "VHOG:0001527") AnnotationAssertion( "ZFA:0005131") AnnotationAssertion(Annotation( "UBERON:cjm"^^xsd:string) "parietal serous membrane of peritoneum") AnnotationAssertion( "uberon") AnnotationAssertion( "peritoneal cavity lining") AnnotationAssertion( "UBERON:0001366") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "parietal peritoneum") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/5/5f/Gray1040.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (external anal sphincter) AnnotationAssertion(Annotation( ) "The Sphincter ani externus (external anal sphincter) is a flat plane of muscular fibers, elliptical in shape and intimately adherent to the integument surrounding the margin of the anus. [WP,unvetted].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:18265") AnnotationAssertion( "FMA:21930") AnnotationAssertion( "MA:0001531") AnnotationAssertion( "NCIT:C32548") AnnotationAssertion(Annotation( "ncithesaurus:External_Anal_Sphincter") "UMLS:C0224395") AnnotationAssertion( "external sphincter ani") AnnotationAssertion( "musculus sphincter ani externus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "sphincter ani externus") AnnotationAssertion( "UBERON:0001367") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "external anal sphincter") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/7/75/Anorectum.gif"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "MA"^^xsd:string) ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obturator externus) AnnotationAssertion(Annotation( ) "An adductor muscle that attaches to the femur and the pelvis. In humans, the obturator externus muscle is a flat, triangular muscle, which covers the outer surface of the anterior wall of the pelvis. It is sometimes considered part of the medial compartment of thigh, and sometimes considered part of the gluteal region. [WP,generalized].") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0010043") Annotation( "AAO"^^xsd:string) Annotation( "AAO:EJS"^^xsd:string) "Originates on the ventro-lateral pelvic rim and inserts on the ventral aspect of the femur, medial to the insertion of the pectineus.[AAO]") AnnotationAssertion(Annotation( "AAO"^^xsd:string) "the definition generalized to accommodate the AAO class - 'Originates on the ventro-lateral pelvic rim and inserts on the ventral aspect of the femur, medial to the insertion of the pectineus.' [AAO:0010043]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010043") AnnotationAssertion( "EMAPA:36236") AnnotationAssertion( "FMA:22299") AnnotationAssertion( "MA:0002347") AnnotationAssertion( "NCIT:C33191") AnnotationAssertion(Annotation( "ncithesaurus:Obturator_Externus_Muscle") "UMLS:C1518528") AnnotationAssertion(Annotation( "AAO:0010043") "M. obturator externus") AnnotationAssertion( "external obturator") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "external obturator") AnnotationAssertion(Annotation( ) "external obturatus") AnnotationAssertion(Annotation( ) "externus obturator") AnnotationAssertion(Annotation( ) Annotation( ) "musculus obturatorius externus") AnnotationAssertion(Annotation( ) "obturator externus") AnnotationAssertion(Annotation( ) "obturatorius externus") AnnotationAssertion(Annotation( ) "obturatus externus") AnnotationAssertion( "UBERON:0001368") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "obturator externus") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/5/55/Posterior_Hip_Muscles_1.PNG"^^xsd:anyURI) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf(Annotation( "Wikipedia"^^xsd:string) ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "obturator foramen and obturatory membrane") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "trochanteric fossa of femur") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (iliacus muscle) AnnotationAssertion(Annotation( ) "The iliacus is a flat, triangular muscle, which fills the iliac fossa. [WP,unvetted].") AnnotationAssertion(Annotation( "AAO"^^xsd:string) "AAO has iliacus major and minor, both of which attach to ilium and femur - consider grouping these somehow") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:19164") AnnotationAssertion( "FMA:22310") AnnotationAssertion( "MA:0002318") AnnotationAssertion( "NCIT:C32762") AnnotationAssertion(Annotation( "ncithesaurus:Iliacus") "UMLS:C0224418") AnnotationAssertion( "anterior muscle of pelvic girdle") AnnotationAssertion(Annotation( "MA:0002318") "iliacus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "iliacus muscle") AnnotationAssertion(Annotation( ) Annotation( ) "musculus iliacus") AnnotationAssertion( "UBERON:0001369") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "iliacus muscle") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/e/e2/Anterior_Hip_Muscles_2.PNG"^^xsd:anyURI) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf(Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "lesser trochanter of femur") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (gluteus maximus) AnnotationAssertion(Annotation( ) "The largest and most superficial of the three gluteal muscles [WP,unvetted].") AnnotationAssertion( "In humans, it makes up a large portion of the shape and appearance of the buttocks. It is a broad and thick fleshy mass of a quadrilateral shape, and forms the prominence of the nates. Its large size is one of the most characteristic features of the muscular system in humans, connected as it is with the power of maintaining the trunk in the erect posture. The muscle is remarkably coarse in structure, being made up of fasciculi lying parallel with one another and collected together into large bundles separated by fibrous septa.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:18527") AnnotationAssertion( "FMA:22314") AnnotationAssertion( "MA:0002309") AnnotationAssertion( "NCIT:C52560") AnnotationAssertion( "OpenCyc:Mx4rvVjdMZwpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Gluteus_Maximus") "UMLS:C0224424") AnnotationAssertion(Annotation( ) "gluteus maximus muscle") AnnotationAssertion( "glutæus maximus") AnnotationAssertion( "m.gluteus maximus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "glutaeus maximus muscle") AnnotationAssertion( "gluteus superficialis") AnnotationAssertion(Annotation( ) Annotation( ) "musculus gluteus maximus") AnnotationAssertion( "UBERON:0001370") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "gluteus maximus") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/7/70/Posterior_Hip_Muscles_3.PNG"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "Gluteal surface of ilium lumbar fascia sacrum sacrotuberous ligament") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (gluteus medius) AnnotationAssertion(Annotation( ) "One of three gluteal muscles, is a broad, thick, radiating muscle, situated on the outer surface of the pelvis. Its posterior third is covered by the gluteus maximus, its anterior two-thirds by the gluteal aponeurosis, which separates it from the superficial fascia and integument. [WP,unvetted].") AnnotationAssertion( "A&P heads in rat, single head in humans[DOI:10.1002/ar.22919]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:19163") AnnotationAssertion( "FMA:22315") AnnotationAssertion( "MA:0002310") AnnotationAssertion( "NCIT:C52933") AnnotationAssertion(Annotation( "ncithesaurus:Gluteus_Medius") "UMLS:C0224425") AnnotationAssertion( "galen:GluteusMedius") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "gluteus medius muscle") AnnotationAssertion(Annotation( ) "musculus gluteus medius") AnnotationAssertion(Annotation( ) Annotation( ) "musculus gluteus medius") AnnotationAssertion( "UBERON:0001371") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "gluteus medius") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/7/70/Posterior_Hip_Muscles_3.PNG"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "Gluteal surface of ilium under gluteus maximus") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "Greater trochanter of the femur") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (psoas minor muscle) AnnotationAssertion(Annotation( ) "The psoas minor is a long, slender skeletal muscle that, when present, is placed in front of the psoas major muscle. [WP,unvetted].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0001878") AnnotationAssertion( "EMAPA:18170") AnnotationAssertion( "FMA:22350") AnnotationAssertion( "MA:0002359") AnnotationAssertion( "NCIT:C33421") AnnotationAssertion(Annotation( "ncithesaurus:Psoas_Minor") "UMLS:C0224420") AnnotationAssertion(Annotation( "MA:0002359") "psoas minor") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "m. psoas minor") AnnotationAssertion( "UBERON:0001372") AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "Human variation notes: It is absent in 40% of individuals.") AnnotationAssertion(rdfs:label "psoas minor muscle") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/b/b2/Gray430.png"^^xsd:anyURI) SubClassOf(Annotation( "MA"^^xsd:string) ) SubClassOf(Annotation( "Lateral surface bodies of T12 and L1 vertebrae and intervening intervertebral disc") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "pectineal line") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (sartorius muscle) AnnotationAssertion(Annotation( ) "The Sartorius muscle - the longest muscle in the human body - is a long thin muscle that runs down the length of the thigh. Its upper portion forms the lateral border of the femoral triangle.") AnnotationAssertion( "We do NOT group this AAO class here at this stage until further evidence of shared attachments") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001192") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0072528305 Kardong KV, Vertebrates: Comparative Anatomy, Function, Evolution (2006) p.391") "The ambiens of reptiles and the iliotibialis of amphibians are likely homologues of the sartorius.[well established][VHOG]") AnnotationAssertion( "No iliotibialis in AAO - M. sartorius has def: 'Originates on the ventral pelvic rim, the pubic region, and the ventral surface of the adductor longus. The insertion bifurcates distally; the ventral portion attaches to the aponeurosis of the cruralis and the dorsal part attaches to the distal attachment of the gracilis major, the semitendinosus, and to the aponeurosis of the cruralis.' [AAO:0010027]") AnnotationAssertion( "The ambiens of reptiles and the iliotibialis of amphibians are likely homologues of the sartorius. Kardong KV, Vertebrates: Comparative Anatomy, Function, Evolution, Fourth Edition (2006) McGraw-Hill, p.391 [VHOG:0001192]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0001215") AnnotationAssertion( "EHDAA2:0001776") AnnotationAssertion( "EHDAA:10583") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37693") AnnotationAssertion( "FMA:22353") AnnotationAssertion( "MA:0002368") AnnotationAssertion( "NCIT:C33515") AnnotationAssertion(Annotation( "ncithesaurus:Sartorius_Muscle") "UMLS:C0224434") AnnotationAssertion( "VHOG:0001192") AnnotationAssertion( "galen:Sartorius") AnnotationAssertion(Annotation( "MA:0002368") "sartorius") AnnotationAssertion( "uberon") AnnotationAssertion( "M. sartorius") AnnotationAssertion(Annotation( ) "ambliens") AnnotationAssertion(Annotation( ) Annotation( ) "musculus sartorius") AnnotationAssertion( "UBERON:0001373") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "sartorius muscle") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/a/af/Sartorius.png"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "femoral nerve") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "anteromedial surface of the upper tibia in the pes anserinus") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (biceps femoris) AnnotationAssertion(Annotation( ) "The biceps femoris is a muscle of the posterior (the back) thigh. As its name implies, it has two parts, one of which (the long head) forms part of the hamstrings muscle group. [WP,unvetted].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0003418") AnnotationAssertion( "EFO:0001418") AnnotationAssertion( "EMAPA:35170") AnnotationAssertion( "FMA:22356") AnnotationAssertion( "MA:0002270") AnnotationAssertion( "NCIT:C53147") AnnotationAssertion(Annotation( "ncithesaurus:Biceps_Femoris") "UMLS:C0224449") AnnotationAssertion( "galen:BicepsFemoris") AnnotationAssertion(Annotation( "BTO:0003418") "biceps femoris muscle") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "musculus biceps femoris") AnnotationAssertion( "UBERON:0001374") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "biceps femoris") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/b/bc/Biceps_femoris_muscle_long_head.PNG"^^xsd:anyURI) SubClassOf(Annotation( "cjm"^^xsd:string) ) SubClassOf(Annotation( "long head: tibial nerveshort head: common peroneal nerve") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "the head of the fibula which articulates with the back of the lateral tibial condyle") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "the head of the fibula which articulates with the back of the lateral tibial condyle") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (semitendinosus) AnnotationAssertion(Annotation( ) "The semitendinosus is a muscle in the back of the thigh; it is one of the hamstrings. [WP,unvetted].") AnnotationAssertion( "A&P heads in rat, single head in humans[DOI:10.1002/ar.22919]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0001236") AnnotationAssertion( "EMAPA:35762") AnnotationAssertion( "FMA:22357") AnnotationAssertion( "MA:0002375") AnnotationAssertion( "NCIT:C53176") AnnotationAssertion(Annotation( "ncithesaurus:Semitendinosus") "UMLS:C0224453") AnnotationAssertion( "galen:Semitendinosus") AnnotationAssertion( "semitendinosus muscle") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "musculus semitendinosus") AnnotationAssertion(Annotation( "BTO:0001236") "musculus semitendinosus") AnnotationAssertion( "UBERON:0001375") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "semitendinosus") AnnotationAssertion( "Semitendinosus:muscle.PNG"^^xsd:anyURI) SubClassOf(Annotation( "cjm"^^xsd:string) ) SubClassOf(Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (tensor fasciae latae muscle) AnnotationAssertion(Annotation( ) "The tensor fasciae latae or tensor fasciæ latæ is a muscle of the thigh. [WP,unvetted].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:35855") AnnotationAssertion( "FMA:22423") AnnotationAssertion( "MA:0002391") AnnotationAssertion( "NCIT:C53072") AnnotationAssertion(Annotation( "ncithesaurus:Tensor_Fasciae_Lata") "UMLS:C1384497") AnnotationAssertion(Annotation( ) Annotation( ) "musculus tensor fasciae latae") AnnotationAssertion(Annotation( "FMA:22423") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "musculus tensor fasciae latae") AnnotationAssertion(Annotation( "MA:0002391") "tensor fasciae lata") AnnotationAssertion( "tensor fasciae lata muscle") AnnotationAssertion(Annotation( "FMA:22423") "tensor fasciae latae") AnnotationAssertion( "tensor of fascia lata") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001376") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "tensor fasciae latae muscle") AnnotationAssertion( "Anatomical:dissection5.JPG"^^xsd:anyURI) AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/e/e2/Anterior_Hip_Muscles_2.PNG"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (quadriceps femoris) AnnotationAssertion(Annotation( "ISBN:0073040584"^^xsd:string) "One of the muscles belong to the group consisting of the rectus femoris and the three heads of the vastus (lateralis, medialis, intermedius).") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000828") Annotation( "VHOG"^^xsd:string) Annotation( ) "The quadriceps is a collective term for the rectus femoris and the three heads of the vastus (lateralis, medialis, intermedius). [Evolution, Fourth_Edition_(2006)_McGraw-Hill, Function, Kardong_KV, Vertebrates:_Comparative_Anatomy, p.391][VHOG]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0001149") AnnotationAssertion( "EFO:0001938") AnnotationAssertion( "EHDAA2:0001583") AnnotationAssertion( "EHDAA:8299") AnnotationAssertion( "EMAPA:19146") AnnotationAssertion( "FMA:22428") AnnotationAssertion( "MA:0002363") AnnotationAssertion( "NCIT:C33441") AnnotationAssertion( "OpenCyc:Mx4rvVjd-JwpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Quadriceps_Muscle_of_the_Thigh") "UMLS:C0224440") AnnotationAssertion( "VHOG:0000828") AnnotationAssertion( "galen:QuadricepsFemoris") AnnotationAssertion( "quadriceps") AnnotationAssertion( "quadriceps femoris muscle") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "musculus quadriceps femoris") AnnotationAssertion(Annotation( "BTO:0001149") "musculus quadriceps femoris") AnnotationAssertion(Annotation( "BTO:0001149") "quadricep muscle") AnnotationAssertion(Annotation( "BTO:0001149") "quadriceps muscle") AnnotationAssertion(Annotation( "BTO:0001149") "quadriceps muscle of the thigh") AnnotationAssertion(Annotation( "BTO:0001149") "quadriceps muscle of thigh") AnnotationAssertion( "UBERON:0001377") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "quadriceps femoris") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/5/57/Illu_lower_extremity_muscles.jpg"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "combined rectus femoris and vastus muscles") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "tibial tuberosity") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (rectus femoris) AnnotationAssertion(Annotation( ) "The Rectus femoris muscle is one of the four quadriceps muscles of the human body. (The others are the vastus medialis, the vastus intermedius, and the vastus lateralis. All four combine to form the quadriceps tendon, which inserts into the patella and continues as the patellar ligament. ) The Rectus femoris is situated in the middle of the front of the thigh; it is fusiform in shape, and its superficial fibers are arranged in a bipenniform manner, the deep fibers running straight down to the deep aponeurosis. [WP,unvetted].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0001564") AnnotationAssertion( "EMAPA:36266") AnnotationAssertion( "FMA:22430") AnnotationAssertion( "MA:0002365") AnnotationAssertion( "NCIT:C53175") AnnotationAssertion(Annotation( "ncithesaurus:Rectus_Femoris") "UMLS:C0584894") AnnotationAssertion( "musculus rectos femoris") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001378") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "rectus femoris") AnnotationAssertion( "Rectus:femoris.png"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "ISBN:0073040584"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "anterior inferior iliac spine and the exterior surface of the bony ridge which forms the iliac portion of the acetabulum") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (vastus lateralis) AnnotationAssertion(Annotation( ) "The Vastus lateralis (Vastus externus) is the largest part of the Quadriceps femoris. It arises by a broad aponeurosis, which is attached to the upper part of the intertrochanteric line, to the anterior and inferior borders of the greater trochanter, to the lateral lip of the gluteal tuberosity, and to the upper half of the lateral lip of the linea aspera; this aponeurosis covers the upper three-fourths of the muscle, and from its deep surface many fibers take origin. A few additional fibers arise from the tendon of the Glutæus maximus, and from the lateral intermuscular septum between the Vastus lateralis and short head of the Biceps femoris. The fibers form a large fleshy mass, which is attached to a strong aponeurosis, placed on the deep surface of the lower part of the muscle: this aponeurosis becomes contracted and thickened into a flat tendon inserted into the lateral border of the patella, blending with the Quadriceps femoris tendon, and giving an expansion to the capsule of the knee-joint. [WP,unvetted].") AnnotationAssertion( "lateralis") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0001563") AnnotationAssertion( "EFO:0001937") AnnotationAssertion( "EMAPA:36244") AnnotationAssertion( "FMA:22431") AnnotationAssertion( "MA:0002402") AnnotationAssertion( "NCIT:C53073") AnnotationAssertion(Annotation( "ncithesaurus:Vastus_Lateralis") "UMLS:C0224444") AnnotationAssertion( "galen:VastusLateralis") AnnotationAssertion( "vastus lateralis muscle") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0001563") "vastus externus") AnnotationAssertion( "UBERON:0001379") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "vastus lateralis") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/5/57/Illu_lower_extremity_muscles.jpg"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "ISBN:0073040584"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (vastus medialis) AnnotationAssertion(Annotation( ) "The vastus medialis, often called the 'teardrop' muscle, is a medially located muscle of the quadriceps. [WP,unvetted].") AnnotationAssertion( "medialis") AnnotationAssertion( ) AnnotationAssertion( "BTO:0004913") AnnotationAssertion( "EMAPA:36245") AnnotationAssertion( "FMA:22432") AnnotationAssertion( "MA:0002403") AnnotationAssertion( "NCIT:C117736") AnnotationAssertion( "galen:VastusMedialis") AnnotationAssertion( "vastus medialis muscle") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0004913") "vastus internus") AnnotationAssertion( "UBERON:0001380") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "vastus medialis") AnnotationAssertion( "https://upload.wikimedia.org/wikipedia/commons/0/05/Illu_lower_extremity_muscles.jpg"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "ISBN:0073040584"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (semimembranosus muscle) AnnotationAssertion(Annotation( ) "The semimembranosus is a muscle in the back of the thigh. It is the most medial of the three hamstring muscles. [WP,unvetted].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0003177") AnnotationAssertion( "EMAPA:36242") AnnotationAssertion( "FMA:22438") AnnotationAssertion( "MA:0002371") AnnotationAssertion( "NCIT:C52987") AnnotationAssertion(Annotation( "ncithesaurus:Semimembranosus") "UMLS:C0224452") AnnotationAssertion( "galen:Semimembranosus") AnnotationAssertion(Annotation( "BTO:0003177") Annotation( ) "musculus semimembranosus") AnnotationAssertion(Annotation( "MA:0002371") "semimembranosus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001381") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "semimembranosus muscle") AnnotationAssertion( "Semimembranosus:muscle.PNG"^^xsd:anyURI) SubClassOf(Annotation( "cjm"^^xsd:string) ) # Class: (pectineus muscle) AnnotationAssertion(Annotation( ) "An adductor muscle that attaches to the pelvic bone and the femur. In humans, The pectineus muscle is a flat, quadrangular muscle, situated at the anterior part of the upper and medial aspect of the thigh. It can be classified in the medial compartment of thigh (when the function is emphasized) or the anterior compartment of thigh (when the nerve is emphasized). [WP,generalized].") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0010036") Annotation( "AAO"^^xsd:string) Annotation( "AAO:EJS"^^xsd:string) "Originates on the lateral border of the ilium and the anterior margin of the pubis. It inserts on the ventral surface of the femoral shaft.[AAO]") AnnotationAssertion(Annotation( "AAO"^^xsd:string) "Definition generalized to accommodate AAO class - 'Originates on the lateral border of the ilium and the anterior margin of the pubis. It inserts on the ventral surface of the femoral shaft.' [AAO:0010036]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010036") AnnotationAssertion( "EMAPA:36238") AnnotationAssertion( "FMA:22440") AnnotationAssertion( "MA:0002353") AnnotationAssertion( "NCIT:C52978") AnnotationAssertion(Annotation( "ncithesaurus:Pectineus") "UMLS:C0224447") AnnotationAssertion(Annotation( "AAO:0010036") "M. pectineus") AnnotationAssertion( "pectineus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "musculus pectineus") AnnotationAssertion( "UBERON:0001382") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "pectineus muscle") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/e/e2/Anterior_Hip_Muscles_2.PNG"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "Wikipedia"^^xsd:string) ) SubClassOf(Annotation( "Femoral nerve sometimes obturator nerve") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "pectineal line - superior pubic ramus") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (muscle of leg) AnnotationAssertion(Annotation( ) Annotation( ) "A muscle that is part of the region of the hindlimb between the pelvis and ankle.") AnnotationAssertion( "see notes on UBERON:0000978 for possible confusion over the term 'leg'.") AnnotationAssertion( "UBERON:0003270") AnnotationAssertion( ) AnnotationAssertion( "BTO:0000722") AnnotationAssertion( "EHDAA:8291") AnnotationAssertion( "EMAPA:19144") AnnotationAssertion( "EMAPA:19318") AnnotationAssertion( "MA:0000672") AnnotationAssertion( "RETIRED_EHDAA2:0000974") AnnotationAssertion( "leg muscle") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "leg muscle organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "leg skeletal muscle") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "leg skeletal muscle tissue") AnnotationAssertion(Annotation( ) Annotation( "OBOL:automatic"^^xsd:string) "muscle of hindlimb zeugopod or stylopod") AnnotationAssertion(Annotation( ) Annotation( "OBOL:automatic"^^xsd:string) "muscle of thigh or crus") AnnotationAssertion(Annotation( ) Annotation( "OBOL:automatic"^^xsd:string) "muscle of upper or lower hindlimb segment") AnnotationAssertion( "muscle of upper/lower leg") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "muscle organ of leg") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "skeletal muscle of leg") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001383") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "muscle of leg") SubClassOf( ) SubClassOf(Annotation( "prolog"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (primary motor cortex) AnnotationAssertion(Annotation( "NLX:143555") "The part of the cerebral cortex that receives projections from the motor thalamus and which projects to motor neurons in the brainstem and spinal cord. The motor cortex corresponds to Brodmann's area 4 (MM). The primary motor cortex, or M1, is located on the precentral gyrus and on the anterior paracentral lobule on the medial surface of the brain. Of the three motor cortex areas, stimulation of the primary motor cortex requires the least amount of electrical current to elicit a movement. http://neuroscience.uth.tmc.edu/s3/chapter03.html.") AnnotationAssertion( "TODO - in MA this is asserted to be part_of BOTH frontal and parietal cortex. in ABA these are disjoint. FMA makes no commitment beyond cerebral cortex. Wikipedia says frontal lobe. Check if species difference or difference in definition. Removed relationship: part_of UBERON:0001872 parietal lobe") AnnotationAssertion(Annotation( "NLX:143555") "The part of the cerebral cortex that receives projections from the motor thalamus and which projects to motor neurons in the brainstem and spinal cord. The motor cortex corresponds to Brodmann's area 4 (MM). The primary motor cortex, or M1, is located on the precentral gyrus and on the anterior paracentral lobule on the medial surface of the brain. Of the three motor cortex areas, stimulation of the primary motor cortex requires the least amount of electrical current to elicit a movement. http://neuroscience.uth.tmc.edu/s3/chapter03.html") AnnotationAssertion(Annotation( "2012-08-31") Annotation( "MP:0000800") Annotation( "MP") Annotation( "MGI:csmith") "the area of the frontal lobe that is involved with integration of voluntary movements and with speech.[MP]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:M1") AnnotationAssertion( "BAMS:MO") AnnotationAssertion( "BAMS:MOp") AnnotationAssertion( "BM:Tel-Cx-M1") AnnotationAssertion( "BTO:0004348") AnnotationAssertion( "DHBA:10162") AnnotationAssertion( "EFO:0002472") AnnotationAssertion( "EMAPA:35704") AnnotationAssertion( "FMA:224854") AnnotationAssertion( "MA:0000907") AnnotationAssertion( "MBA:985") AnnotationAssertion( "MESH:A08.186.211.730.885.213.270.548") AnnotationAssertion( "NCIT:C97339") AnnotationAssertion( "NLX:143555") AnnotationAssertion(Annotation( "ncithesaurus:Primary_Motor_Cortex") "UMLS:C0026607") AnnotationAssertion(Annotation( "FMA:224854") "motor cortex") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0004348") "Rolando's area") AnnotationAssertion(Annotation( "BTO:0004348") "excitable area") AnnotationAssertion(Annotation( ) Annotation( ) "gyrus precentralis") AnnotationAssertion(Annotation( "BTO:0004348") "motor area") AnnotationAssertion(Annotation( ) Annotation( "MP:0000798") "prefrontal gyrus") AnnotationAssertion(Annotation( "BAMS:MOp") "primary motor area") AnnotationAssertion(Annotation( "BAMS:MO") "somatic motor areas") AnnotationAssertion(Annotation( "BAMS:MO") "somatomotor areas") AnnotationAssertion( "UBERON:0001384") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "primary motor cortex") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/e/eb/Ba4.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "MA"^^xsd:string) Annotation( "Wikipedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (tibialis anterior) AnnotationAssertion(Annotation( ) Annotation( ) "A muscle that originates in the upper two-thirds of the lateral surface of the tibia and inserts into the medial cuneiform and first metatarsal bones of the foot. Its acts to invert the foot. It is situated on the lateral side of the tibia; it is thick and fleshy above, tendinous below. This muscle overlaps the anterior tibial vessels and deep peroneal nerve in the upper part of the leg. [WP,unvetted]. The M. tibialis cranialis is a muscle that flexes the tarsometatarsus. It originates on the craniodistal aspect of the femur and proximal tibiotarsus and inserts on the cranial surface of the tarsometarsus[EvoWiki].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0001382") AnnotationAssertion( "EFO:0001385") AnnotationAssertion( "EMAPA:35866") AnnotationAssertion( "FMA:22532") AnnotationAssertion( "MA:0002395") AnnotationAssertion( "NCIT:C53079") AnnotationAssertion(Annotation( "ncithesaurus:Tibialis_Cranialis") "UMLS:C1710423") AnnotationAssertion( "galen:TibialisAnterior") AnnotationAssertion(Annotation( "BTO:0001382") "tibialis anterior muscle") AnnotationAssertion(Annotation( "MA:0002395") "tibialis cranialis") AnnotationAssertion( "tibilais cranialis") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0001382") "anterior tibialis") AnnotationAssertion(Annotation( "BTO:0001382") "ibialis anticus") AnnotationAssertion(Annotation( ) Annotation( ) "musculus tibialis anterior") AnnotationAssertion( "UBERON:0001385") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "tibialis anterior") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/9/9c/Gray1240.png"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "medial cuneiform and first metatarsal bones of the foot") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "medial cuneiform and first metatarsal bones of the foot") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (extensor digitorum longus) AnnotationAssertion(Annotation( "MP:0004246") "A penniform muscle of the lateral front part of the hindlimb responsible for extension of the digits and dorsiflexion of the ankle.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0000436") AnnotationAssertion( "EMAPA:35330") AnnotationAssertion( "FMA:22534") AnnotationAssertion( "MA:0002295") AnnotationAssertion( "NCIT:C52918") AnnotationAssertion(Annotation( "ncithesaurus:Extensor_Digitorum_Longus") "UMLS:C0224464") AnnotationAssertion(Annotation( "BTO:0000436") "extensor digitorum longus muscle") AnnotationAssertion(Annotation( "HP:0011916") "toe extensor") AnnotationAssertion( "toe extensor muscle") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "musculus extensor digitorum longus") AnnotationAssertion( "UBERON:0001386") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "extensor digitorum longus") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/5/5f/Gray1241.png"^^xsd:anyURI) SubClassOf(Annotation( "BTO"^^xsd:string) ) SubClassOf( ) SubClassOf(Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "Anterior lateral condyle of tibia anterior shaft of fibula and superior of interosseous membrane") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "Anterior lateral condyle of tibia anterior shaft of fibula and superior of interosseous membrane") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "Anterior lateral condyle of tibia anterior shaft of fibula and superior of interosseous membrane") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "Dorsal surface; middle and distal phalanges of lateral four digits") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (fibularis longus) AnnotationAssertion(Annotation( ) "A superficial muscle in the lateral compartment of the leg, and acts to evert and plantar flex the ankle. It is situated at the upper part of the lateral side of the leg, and is the most superficial of the three peroneus muscles. It is innervated by the superficial fibular nerve (superficial peroneal nerve). [WP,unvetted].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:36253") AnnotationAssertion( "FMA:22539") AnnotationAssertion( "MA:0002356") AnnotationAssertion( "NCIT:C53171") AnnotationAssertion(Annotation( "ncithesaurus:Peroneus_Longus") "UMLS:C0224469") AnnotationAssertion( "galen:PeroneusLongus") AnnotationAssertion(Annotation( "FMA:22539") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "musculus peroneus longus") AnnotationAssertion( "peroneus longus") AnnotationAssertion( "peroneus longus muscle") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "fibularis longus") AnnotationAssertion(Annotation( ) "fibularis longus muscle") AnnotationAssertion(Annotation( ) "peronaei longus") AnnotationAssertion(Annotation( ) "peronaeus longus") AnnotationAssertion(Annotation( ) "peroneous longus") AnnotationAssertion(Annotation( ) "peroneus longus muscle") AnnotationAssertion( "UBERON:0001387") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "fibularis longus") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/9/9c/Gray1240.png"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (gastrocnemius) AnnotationAssertion(Annotation( ) Annotation( "ISBN:0073040584"^^xsd:string) Annotation( "MP:0013188") "The most superficial muscle of the triceps surae group, in the posterior portion of the lower hindleg.") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001193") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( ) "The most superficial calf muscle in the posterior part of the leg. [TFD][VHOG]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001193") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0072528305 Kardong KV, Vertebrates: Comparative Anatomy, Function, Evolution (2006) p.393") "The most prominent ventral muscle of the shank is the gastrocnemius, the 'calf' muscle. In mammals, it has two heads, resulting from the fusion of two different phylogenetic predecessors.[well established][VHOG]") AnnotationAssertion( "In mammals this muscle has two heads[ISBN:0073040584]") AnnotationAssertion( "involved in standing, walking, running and jumping") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0000506") AnnotationAssertion( "EFO:0001413") AnnotationAssertion( "EHDAA2:0000701") AnnotationAssertion( "EHDAA:8293") AnnotationAssertion( "EMAPA:35375") AnnotationAssertion( "FMA:22541") AnnotationAssertion( "MA:0002306") AnnotationAssertion( "NCIT:C32666") AnnotationAssertion(Annotation( "ncithesaurus:Gastrocnemius_Muscle") "UMLS:C0242691") AnnotationAssertion( "VHOG:0001193") AnnotationAssertion( "galen:Gastrocnemius") AnnotationAssertion(Annotation( "BTO:0000506") "gastrocnemius muscle") AnnotationAssertion( "m. gastrocnemius") AnnotationAssertion( "m.gastrocnemius") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "musculus gastrocnemius") AnnotationAssertion( "UBERON:0001388") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "gastrocnemius") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/8/8e/Gastrocnemius.png"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "tibial nerve from the sciatic specifically nerve roots") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "superior to articular surfaces of lateral condyle of femur and medial condyle of femur") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "tendo calcaneus into mid-posteior calcaneus") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "tendo calcaneus into mid-posteior calcaneus") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (soleus muscle) AnnotationAssertion(Annotation( ) Annotation( ) "A deep muscle of the triceps surae group, in the superficial posterior compartment of the leg.") AnnotationAssertion(Annotation( ) ) AnnotationAssertion( "soleal") AnnotationAssertion(Annotation( "MP:0003081") "responsible for plantar flexion of the foot") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0001265") AnnotationAssertion( "EFO:0001946") AnnotationAssertion( "EMAPA:35786") AnnotationAssertion( "FMA:22542") AnnotationAssertion( "MA:0002424") AnnotationAssertion( "NCIT:C53075") AnnotationAssertion(Annotation( "ncithesaurus:Soleus") "UMLS:C0242694") AnnotationAssertion( "galen:Soleus") AnnotationAssertion(Annotation( "MA:0002424") "soleus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001389") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "soleus muscle") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/5/57/Illu_lower_extremity_muscles.jpg"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "tibial nerve specifically nerve roots ") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "fibula medial border of tibia") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (sural artery) AnnotationAssertion(Annotation( ) "The sural arteries (inferior muscular arteries) are two large branches, which are distributed to the Gastrocnemius, Soleus, and Plantaris. The term applies to any of four or five arteries arising from the popliteal artery, with distribution to the muscles and integument of the calf, and with anastomoses to the posterior tibial, medial and lateral inferior genicular arteries. [WP,unvetted].") AnnotationAssertion( "TODO - check NCITA class") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37125") AnnotationAssertion( "FMA:22570") AnnotationAssertion( "MA:0002058") AnnotationAssertion( "NCIT:C52734") AnnotationAssertion(Annotation( "ncithesaurus:External_Sural_Artery") "UMLS:C0226464") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001390") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "sural artery") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/6/60/Gray551.png"^^xsd:anyURI) SubClassOf( ) # Class: (popliteus muscle) AnnotationAssertion(Annotation( ) "The popliteus muscle in the leg is used to unlock the knee by laterally rotating the femur on the tibia during a closed chain movement (such as one with the foot in contact with the ground). [WP,unvetted].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:36240") AnnotationAssertion( "FMA:22590") AnnotationAssertion( "MA:0002554") AnnotationAssertion( "NCIT:C33340") AnnotationAssertion(Annotation( "ncithesaurus:Popliteus_Muscle") "UMLS:C0224457") AnnotationAssertion( "m.popliteus") AnnotationAssertion( "poplitea") AnnotationAssertion( "popliteal") AnnotationAssertion(Annotation( "FMA:22590") "popliteal muscle") AnnotationAssertion(Annotation( "FMA:22590") Annotation( "MA:0002554") "popliteus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "musculus popliteus") AnnotationAssertion( "UBERON:0001391") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "popliteus muscle") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/c/c1/Gray439.png"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "posterior-medial tibia under the tibial condyles") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "middle facet of the lateral surface of the lateral femoral condyle") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (flexor hallucis longus) AnnotationAssertion(Annotation( ) "A deep muscle of the posterior compartment of the hindlimb that is innervated by the tibial nerve, arises from the fibula and insets in the distal phalanx of pedal digit 1.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37588") AnnotationAssertion( "FMA:22593") AnnotationAssertion( "MA:0002301") AnnotationAssertion( "NCIT:C52925") AnnotationAssertion(Annotation( "ncithesaurus:Flexor_Hallucis_Longus") "UMLS:C0224473") AnnotationAssertion(Annotation( ) "flexor hallucis longus muscle") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001392") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "flexor hallucis longus") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/9/92/Gray442.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "tibial nerve S1 and S2 nerve roots") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "fibula posterior aspect of middle 1/3") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "Plantar surface; base of distal phalanx of hallux") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (auditory cortex) AnnotationAssertion(Annotation( ) "The part of the brain that is the ultimate target of afferent auditory information.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:AUD") AnnotationAssertion( "BAMS:Area_1") AnnotationAssertion( "BAMS:Au1") AnnotationAssertion( "BTO:0004343") AnnotationAssertion( "EMAPA:35156") AnnotationAssertion( "FMA:226221") AnnotationAssertion( "GAID:682") AnnotationAssertion( "MA:0000942") AnnotationAssertion( "MBA:247") AnnotationAssertion( "MESH:A08.186.211.730.885.213.863.297") AnnotationAssertion( "NCIT:C52712") AnnotationAssertion(Annotation( "ncithesaurus:Auditory_Cortex") "UMLS:C0004302") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "A1 (primary auditory cortex)") AnnotationAssertion(Annotation( ) "BA41") AnnotationAssertion(Annotation( ) "BA42") AnnotationAssertion(Annotation( ) "Brodmann area 41") AnnotationAssertion(Annotation( ) "Brodmann area 41 & 42") AnnotationAssertion(Annotation( ) "Brodmann area 42") AnnotationAssertion(Annotation( ) "anterior transverse temporal area 41") AnnotationAssertion(Annotation( "BTO:0004343") "auditory area") AnnotationAssertion(Annotation( "BAMS:AUD") "auditory areas") AnnotationAssertion(Annotation( ) "auditory cortex") AnnotationAssertion(Annotation( ) "posterior transverse temporal area 42") AnnotationAssertion(Annotation( ) "primary auditory cortex") AnnotationAssertion(Annotation( "GEO:GSE13344") "temporal auditory neocortex") AnnotationAssertion( "UBERON:0001393") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "auditory cortex") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/8/81/Brodmann_41_42.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "MA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (axillary artery) AnnotationAssertion(Annotation( ) "Artery that supplies the axilla.") AnnotationAssertion( "In human anatomy, the axillary artery is a large blood vessel that conveys oxygenated blood to the lateral aspect of the thorax, the axilla (armpit) and the upper limb. Its origin is at the lateral margin of the first rib, before which it is called the subclavian artery. After passing the lower margin of teres major it becomes the brachial artery.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:18749") AnnotationAssertion( "FMA:22654") AnnotationAssertion( "GAID:473") AnnotationAssertion( "MA:0002573") AnnotationAssertion( "MESH:D001366") AnnotationAssertion( "NCIT:C32169") AnnotationAssertion( "OpenCyc:Mx4rwRh-vZwpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Axillary_Artery") "UMLS:C0004455") AnnotationAssertion( "galen:AxillaryArtery") AnnotationAssertion(Annotation( ) Annotation( ) "arteria axillaris") AnnotationAssertion(Annotation( "FMA:22654") "axillary part of subclavian artery") AnnotationAssertion( "axillary part of trunk of subclavian artery") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001394") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "axillary artery") AnnotationAssertion( "Axillary:limits.PNG"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (thoraco-acromial artery) AnnotationAssertion(Annotation( ) "The thoracoacromial artery (acromiothoracic artery; thoracic axis) is a short trunk, which arises from the forepart of the axillary artery, its origin being generally overlapped by the upper edge of the Pectoralis minor. [WP,unvetted].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37128") AnnotationAssertion( "FMA:22671") AnnotationAssertion( "MA:0002064") AnnotationAssertion( "NCIT:C32046") AnnotationAssertion(Annotation( "ncithesaurus:Acromial_Thoracic_Artery") "UMLS:C0226420") AnnotationAssertion( "acromiothoracic artery") AnnotationAssertion( "thoracoacromial artery") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001395") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "thoraco-acromial artery") AnnotationAssertion( "Axillary:branches.PNG"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lateral thoracic artery) AnnotationAssertion(Annotation( ) "A blood vessel that supplies oxygenated blood to the lateral structures of the thorax and breast. It originates from the axillary artery and follows the lower border of the Pectoralis minor muscle to the side of the chest, supplies the serratus ventralis muscle and the Pectoralis major muscle, and sends branches across the axilla to the axillary lymph nodes and Subscapularis muscle. It anastomoses with the internal thoracic artery, subscapular, and intercostal arteries, and with the pectoral branch of the thoracoacromial artery. In the female it supplies an external mammary branch which turns round the free edge of the Pectoralis major and supplies the breasts. [WP,unvetted].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37095") AnnotationAssertion( "FMA:22674") AnnotationAssertion( "MA:0001989") AnnotationAssertion( "NCIT:C52951") AnnotationAssertion(Annotation( "ncithesaurus:Lateral_Thoracic_Artery") "UMLS:C0226421") AnnotationAssertion( "external mammary artery") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "arteria thoracalis lateralis") AnnotationAssertion( "UBERON:0001396") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "lateral thoracic artery") AnnotationAssertion( "Axillary:branches.PNG"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (subscapular artery) AnnotationAssertion(Annotation( ) "The subscapular artery, the largest branch of the axillary artery, arises at the lower border of the Subscapularis, which it follows to the inferior angle of the scapula, where it anastomoses with the lateral thoracic and intercostal arteries and with the descending branch of the transverse cervical, and ends in the neighboring muscles. About 4 cm. from its origin it gives off two branches, first the scapular circumflex artery and then the thoracodorsal artery. [WP,unvetted].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37116") AnnotationAssertion( "FMA:22677") AnnotationAssertion( "MA:0002050") AnnotationAssertion( "NCIT:C33650") AnnotationAssertion(Annotation( "ncithesaurus:Subscapular_Artery") "UMLS:C0226422") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "arteria subscapularis") AnnotationAssertion( "UBERON:0001397") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "subscapular artery") AnnotationAssertion( "Axillary:branches.PNG"^^xsd:anyURI) SubClassOf( ) # Class: (brachial artery) AnnotationAssertion(Annotation( ) "The brachial artery is the major blood vessel of the (upper) arm. It is the continuation of the axillary artery beyond the lower margin of teres major muscle. It continues down the ventral surface of the arm until it reaches the cubital fossa at the elbow. It then divides into the radial and ulnar arteries which run down the forearm. In some individuals, the bifurcation occurs much earlier and the ulnar and radial arteries extend through the upper arm. The pulse of the brachial artery is palpable on the anterior aspect of the elbow, medial to the tendon of the biceps, and, with the use of a stethoscope and sphygmomanometer (blood pressure cuff) often used to measure the blood pressure. The brachial artery is closely related to the median nerve; in proximal regions, the median nerve is immediately lateral to the brachial artery. Distally, the median nerve crosses the medial side of the brachial artery and lies anterior to the elbow joint. [WP,unvetted].") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0010504") Annotation( "AAO"^^xsd:string) Annotation( "AAO:BJB"^^xsd:string) "Part of the subclavian artery which supplies blood to the forelimb.[AAO]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010504") AnnotationAssertion( "EFO:0004231") AnnotationAssertion( "FMA:22689") AnnotationAssertion( "GAID:475") AnnotationAssertion( "MA:0001921") AnnotationAssertion( "MESH:D001916") AnnotationAssertion( "NCIT:C12681") AnnotationAssertion( "OpenCyc:Mx4rwM-i5JwpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Brachial_Artery") "UMLS:C0006087") AnnotationAssertion( "galen:BrachialArtery") AnnotationAssertion( "brachial part of trunk of subclavian artery") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "arteria brachialis") AnnotationAssertion( "UBERON:0001398") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "brachial artery") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/7/7d/Gray525.png"^^xsd:anyURI) SubClassOf( ) # Class: (deep brachial artery) AnnotationAssertion(Annotation( ) "The arteria profunda brachii (also known as deep artery of the arm and the deep brachial artery) is a large vessel which arises from the medial and back part of the brachial, just below the lower border of the Teres major. [WP,unvetted].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37215") AnnotationAssertion( "FMA:22695") AnnotationAssertion( "MA:0002026") AnnotationAssertion(Annotation( "FMA:22695") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "arteria profunda brachii") AnnotationAssertion( "profunda brachii artery") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001399") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "deep brachial artery") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/9/92/Gray526.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) # Class: (iliocostalis thoracis muscle) AnnotationAssertion(Annotation( ) "The iliocostalis dorsi (musculus accessorius; iliocostalis thoracis) arises by flattened tendons from the upper borders of the angles of the lower six ribs medial to the tendons of insertion of the iliocostalis lumborum; these become muscular, and are inserted into the upper borders of the angles of the upper six ribs and into the back of the transverse process of the seventh cervical vertebra.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37604") AnnotationAssertion( "FMA:22703") AnnotationAssertion( "MA:0002320") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "iliocostalis thoracis") AnnotationAssertion(Annotation( ) "iliocostalis thoracis muscle") AnnotationAssertion(Annotation( ) "musculus accessorius") AnnotationAssertion( "UBERON:0001400") AnnotationAssertion(rdfs:label "iliocostalis thoracis muscle") SubClassOf( ) # Class: (longissimus thoracis muscle) AnnotationAssertion(Annotation( ) Annotation( ) "The longissimus thoracis is the intermediate and largest of the continuations of the sacrospinalis.[WP]. intermediate erector spinae muscle of back; origin, with iliocostalis and from transverse processes of lower thoracic vertebrae; insertion, by lateral slips into most or all of the ribs between angles and tubercles and into tips of transverse processes of upper lumbar vertebrae, and by medial slips into accessory processes of upper lumbar and transverse processes of thoracic vertebrae; action, extends vertebral column; nerve supply, dorsal primary rami of thoracic and lumbar spinal nerves[Stedmans].") AnnotationAssertion( "TODO - add logical definition to determine if AAO class belongs here. Classified as erector spinae in AAO") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0010775") Annotation( "AAO"^^xsd:string) Annotation( "AAO:MEJ") "Epaxial muscle which originates on the antero-lateral urostyle and inserts variably along the neural spines and transverse processes of the presacral vertebrae to the exoccipital bone.[AAO]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010775") AnnotationAssertion( "BTO:0001651") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37653") AnnotationAssertion( "FMA:22709") AnnotationAssertion( "MA:0002339") AnnotationAssertion( "NCIT:C53169") AnnotationAssertion(Annotation( "ncithesaurus:Longissimus_Thoracis") "UMLS:C0224307") AnnotationAssertion(Annotation( "BTO:0001651") "longissimus dorsi") AnnotationAssertion( "longissimus dorsi muscle") AnnotationAssertion(Annotation( "MA:0002339") "longissimus thoracis") AnnotationAssertion(Annotation( ) Annotation( ) "musculus longissimus dorsi") AnnotationAssertion(Annotation( "BTO:0001651") Annotation( ) "musculus longissimus thoracis") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001401") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "longissimus thoracis muscle") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/1/1f/Longissimus.png"^^xsd:anyURI) SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (longissimus cervicis muscle) AnnotationAssertion(Annotation( ) Annotation( "UBERON:cjm"^^xsd:string) "A muscle with origin in transverse processes of upper thoracic vertebrae, and insertion in transverse processes of middle and upper cervical vertebrae that extends cervical vertebrae.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0001650") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37651") AnnotationAssertion( "FMA:22711") AnnotationAssertion( "MA:0002337") AnnotationAssertion( "NCIT:C53167") AnnotationAssertion(Annotation( "ncithesaurus:Longissimus_Cervicis") "UMLS:C0224308") AnnotationAssertion(Annotation( "MA:0002337") "longissimus cervicis") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0001650") "musculus longissimus cervicis") AnnotationAssertion( "UBERON:0001402") AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "; nerve supply, dorsal primary rami of lower cervical and upper thoracic spinal nerves") AnnotationAssertion(rdfs:label "longissimus cervicis muscle") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/1/1f/Longissimus.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (longissimus capitis) AnnotationAssertion(Annotation( ) "A longissimus muscle that lies medial to the longissimus cervicis, between it and the semispinalis capitis. It arises by tendons from the transverse processes of the upper four or five thoracic vertebrae, and the articular processes of the lower three or four cervical vertebrae, and is inserted into the posterior margin of the mastoid process, beneath the splenius capitis and sternocleidomastoid.[WP,unvetted].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0001649") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37650") AnnotationAssertion( "FMA:22714") AnnotationAssertion( "MA:0002336") AnnotationAssertion( "NCIT:C53166") AnnotationAssertion(Annotation( "ncithesaurus:Longissimus_Capitis") "UMLS:C0224309") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0001649") "musculus longissimus capitis") AnnotationAssertion(Annotation( ) "trachelomastoid muscle") AnnotationAssertion( "UBERON:0001403") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "longissimus capitis") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/1/1f/Longissimus.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (radial artery) AnnotationAssertion(Annotation( ) "Branch of the brachial artery beginning below the elbow and extending down the forearm around the wrist and into the palm.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37112") AnnotationAssertion( "FMA:22730") AnnotationAssertion( "GAID:506") AnnotationAssertion( "MA:0002034") AnnotationAssertion( "MESH:D017534") AnnotationAssertion( "NCIT:C12838") AnnotationAssertion( "OpenCyc:Mx4rvxzeR5wpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Radial_Artery") "UMLS:C0162857") AnnotationAssertion( "galen:RadialArtery") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "arteria radialis") AnnotationAssertion( "UBERON:0001404") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "radial artery") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/a/a9/Gray1237.svg"^^xsd:anyURI) SubClassOf( ) # Class: (spinalis thoracis muscle) AnnotationAssertion(Annotation( "BTO:0002624") "Origin: spinous processes of two upper lumbar and two lower thoracic; insertion: spines of upper thoracic vertebrae; innervation: branches of spinal nerves; action: extends vertebral column.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0002624") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37700") AnnotationAssertion( "FMA:22765") AnnotationAssertion( "MA:0002381") AnnotationAssertion( "NCIT:C53038") AnnotationAssertion(Annotation( "ncithesaurus:Spinalis_Thoracis") "UMLS:C0224311") AnnotationAssertion(Annotation( "MA:0002381") "spinalis thoracis") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0002624") "musculus spinalis dorsi") AnnotationAssertion(Annotation( "BTO:0002624") "musculus spinalis thoracis") AnnotationAssertion(Annotation( "BTO:0002624") "spinal muscle of thorax") AnnotationAssertion(Annotation( ) "spinalis dorsi") AnnotationAssertion( "UBERON:0001405") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "spinalis thoracis muscle") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/a/a4/Spinalis.png"^^xsd:anyURI) SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (ulnar artery) AnnotationAssertion(Annotation( ) "The ulnar artery is the main blood vessel, with oxygenated blood, of the medial aspect of the forearm. It arises from the brachial artery and terminates in the superficial palmar arch, which joins with the superficial branch of the radial artery. It is palpable on the anterior and medial aspect of the wrist. Along its course, it is accompanied by a similarly named vein or veins, the ulnar vein or ulnar veins. The ulnar artery, the larger of the two terminal branches of the brachial, begins a little below the bend of the elbow in the cubital fossa, and, passing obliquely downward, reaches the ulnar side of the forearm at a point about midway between the elbow and the wrist. It then runs along the ulnar border to the wrist, crosses the transverse carpal ligament on the radial side of the pisiform bone, and immediately beyond this bone divides into two branches, which enter into the formation of the superficial and deep volar arches. [WP,unvetted].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37675") AnnotationAssertion( "FMA:22796") AnnotationAssertion( "GAID:515") AnnotationAssertion( "MA:0002069") AnnotationAssertion( "MESH:D017535") AnnotationAssertion( "NCIT:C12839") AnnotationAssertion( "OpenCyc:Mx4rwAF2PJwpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Ulnar_Artery") "UMLS:C0162858") AnnotationAssertion( "galen:UlnarArtery") AnnotationAssertion(Annotation( ) Annotation( ) "arteria ulnaris") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001406") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "ulnar artery") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/a/a9/Gray1237.svg"^^xsd:anyURI) SubClassOf( ) # Class: (semispinalis thoracis) AnnotationAssertion(Annotation( ) "The Semispinalis dorsi (or semispinalis thoracis) consists of thin, narrow, fleshy fasciculi, interposed between tendons of considerable length. It arises by a series of small tendons from the transverse processes of the sixth to the tenth thoracic vertebræ, and is inserted, by tendons, into the spinous processes of the upper four thoracic and lower two cervical vertebrae. [WP,unvetted].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37696") AnnotationAssertion( "FMA:22828") AnnotationAssertion( "MA:0002374") AnnotationAssertion( "NCIT:C53006") AnnotationAssertion(Annotation( "ncithesaurus:Semispinalis_Thoracis") "UMLS:C0224316") AnnotationAssertion(Annotation( ) "semispinalis dorsi") AnnotationAssertion(Annotation( ) "semispinalis dorsi muscle") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "musculus semispinalis dorsi") AnnotationAssertion(Annotation( ) Annotation( ) "musculus semispinalis thoracis") AnnotationAssertion( "UBERON:0001407") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "semispinalis thoracis") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/6/65/Semispinalis.png"^^xsd:anyURI) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf(Annotation( "transverse processes of the sixth to the tenth thoracic vertebre") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "spinous processes of the upper four thoracic and lower two cervical vertebrae") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (semispinalis cervicis) AnnotationAssertion(Annotation( ) "The semispinalis cervicis (semispinalis colli), thicker than the semispinalis dorsi, arises by a series of tendinous and fleshy fibers from the transverse processes of the upper five or six thoracic vertebræ, and is inserted into the cervical spinous processes, from the axis to the fifth inclusive. The fasciculus connected with the axis is the largest, and is chiefly muscular in structure. [WP,unvetted].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37695") AnnotationAssertion( "FMA:22829") AnnotationAssertion( "MA:0002373") AnnotationAssertion( "NCIT:C52991") AnnotationAssertion(Annotation( "ncithesaurus:Semispinalis_Cervicis") "UMLS:C0224317") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "musculus semispinalis cervicis") AnnotationAssertion( "UBERON:0001408") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "semispinalis cervicis") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/7/7f/Gray384.png"^^xsd:anyURI) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf(Annotation( "transverse processes of the upper five or six thoracic vertebrae") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "cervical spinous processes from the axis to the fifth") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (semispinalis capitis) AnnotationAssertion(Annotation( ) "The Semispinalis capitis (Complexus) is situated at the upper and back part of the neck, deep to the Splenius, and medial to the Longissimus cervicis and capitis. It arises by a series of tendons from the tips of the transverse processes of the upper six or seven thoracic and the seventh cervical vertebræ, and from the articular processes of the three cervical above this. The tendons, uniting, form a broad muscle, which passes upward, and is inserted between the superior and inferior nuchal lines of the occipital bone. The medial part, usually more or less distinct from the remainder of the muscle, is frequently termed the Spinalis capitis; it is also named the Biventer cervicis since it is traversed by an imperfect tendinous inscription. [WP,unvetted].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37694") AnnotationAssertion( "FMA:22830") AnnotationAssertion( "MA:0002372") AnnotationAssertion( "NCIT:C52989") AnnotationAssertion(Annotation( "ncithesaurus:Semispinalis_Capitis") "UMLS:C0224318") AnnotationAssertion(Annotation( ) "biventer cervicis") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "complexus") AnnotationAssertion(Annotation( ) "complexus muscle") AnnotationAssertion(Annotation( ) Annotation( ) "musculus semispinalis capitis") AnnotationAssertion(Annotation( ) "semispinales capitis") AnnotationAssertion(Annotation( ) "semispinalis capitis muscle") AnnotationAssertion( "UBERON:0001409") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "semispinalis capitis") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/7/7f/Gray384.png"^^xsd:anyURI) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf(Annotation( "Transversal process of lower cervical and higher thoracal columna") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (common palmar digital artery) AnnotationAssertion(Annotation( ) "Three common palmar digital arteries arise from the convexity of the superficial palmar arch and proceed distally on the second, third, and fourth lumbricales muscles.") AnnotationAssertion(Annotation( "MA"^^xsd:string) "the MA term, even though plural, represents the singular, as it is an isa child of artery") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37207") AnnotationAssertion( "FMA:22852") AnnotationAssertion( "MA:0001957") AnnotationAssertion( "NCIT:C52744") AnnotationAssertion(Annotation( "ncithesaurus:Common_Palmar_Digital_Artery") "UMLS:C0226446") AnnotationAssertion( "common palmar digital arteries") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001410") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "common palmar digital artery") SubClassOf( ) # Class: (basilic vein) AnnotationAssertion(Annotation( ) "A superficial vein of the upper limb that drain parts of manus and forearm.") AnnotationAssertion(Annotation( "WP,unvetted") "It originates on the medial (ulnar) side of the dorsal venous network of the manus, and it travels up the base of the forearm and arm. Most of its course is superficial; it generally travels in the subcutaneous fat and other fasciae that lie superficial to the muscles of the upper extremity. Because of this, it is usually visible through the skin. Near the region anterior to the cubital fossa, in the bend of the elbow joint, the basilic vein usually connects with the other large superficial vein of the upper extremity, the cephalic vein, via the median cubital vein. The layout of superficial veins in the forearm is highly variable from person to person, and there are generally a variety of other unnamed superficial veins that the basilic vein communicates with. About halfway up the arm proper (the part between the shoulder and elbow), the basilic vein goes deep, travelling under the muscles. There, around the lower border of the teres major muscle, the anterior and posterior circumflex humeral veins feed into it, just before it joins the brachial veins to form the axillary vein. Along with other superficial veins in the forearm, the basilic vein is a possible site for venipuncture.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37439") AnnotationAssertion( "FMA:22908") AnnotationAssertion( "MA:0002086") AnnotationAssertion( "NCIT:C32197") AnnotationAssertion( "OpenCyc:Mx4rvwrxEpwpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Basilic_Vein") "UMLS:C0226801") AnnotationAssertion( "galen:BasilicVein") AnnotationAssertion( "basilic vein of forearm") AnnotationAssertion(Annotation( "FMA:22908") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "vena basilica antebrachii") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001411") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "basilic vein") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/e/e9/Gray576.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA/obol"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA/obol"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (common palmar digital vein) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37222") AnnotationAssertion( "FMA:22923") AnnotationAssertion( "MA:0002121") AnnotationAssertion(Annotation( ) "proximal palmar digital vein") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001412") AnnotationAssertion(rdfs:comment "Some sources distinguish between the \"proper palmar digital veins\", which are more distal, and the \"common palmar digital veins\", which are more proximal.") AnnotationAssertion(rdfs:label "common palmar digital vein") SubClassOf( ) # Class: (brachial vein) AnnotationAssertion(Annotation( "UBERON:cjm"^^xsd:string) "A vein that accompanies the brachial artery between the shoulder and the elbow.") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0010512") Annotation( "AAO"^^xsd:string) Annotation( "AAO:BJB"^^xsd:string) "Vein which collects blood from the forelimb and drains into the subclavian vein.[AAO]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010512") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37445") AnnotationAssertion( "FMA:22934") AnnotationAssertion( "MA:0002087") AnnotationAssertion( "NCIT:C12883") AnnotationAssertion( "OpenCyc:Mx4rwS3In5wpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Brachial_Vein") "UMLS:C0226812") AnnotationAssertion( "galen:BrachialVein") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001413") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "brachial vein") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/e/e9/Gray576.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA/obol"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA/obol"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (median basilic vein) AnnotationAssertion(Annotation( "ncithesaurus:Median_Basilic_Vein") "A vein between the biceps and pronator radii teres muscles that unites with the common ulnar vein to form the basilic vein within the forearm.") AnnotationAssertion( "Merged median cubital and basilic veins on basis of wikipedia synonym - needs verificied") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37173") AnnotationAssertion( "FMA:22963") AnnotationAssertion( "MA:0002176") AnnotationAssertion( "NCIT:C33070") AnnotationAssertion( "OpenCyc:Mx4rvzQSYZwpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( ) Annotation( "MA:0002176") "median cubital vein") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "medial antecubital vein") AnnotationAssertion(Annotation( ) "median cubital") AnnotationAssertion(Annotation( ) Annotation( ) "vena mediana cubiti") AnnotationAssertion( "UBERON:0001414") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "median basilic vein") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/b/ba/Gray574.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA/obol"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (skin of pelvis) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A zone of skin that is part of a pelvis [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37282") AnnotationAssertion( "FMA:22984") AnnotationAssertion( "MA:0000546") AnnotationAssertion( "pelvic skin") AnnotationAssertion( "pelvis skin") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "pelvis zone of skin") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "zone of skin of pelvis") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001415") AnnotationAssertion(rdfs:label "skin of pelvis") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (skin of abdomen) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A zone of skin that is part of an abdomen [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EFO:0000214") AnnotationAssertion( "FMA:22988") AnnotationAssertion( "FMA:23000") AnnotationAssertion( "MA:0000523") AnnotationAssertion( "NCIT:C52758") AnnotationAssertion(Annotation( "ncithesaurus:Abdominal_Skin") "UMLS:C0222166") AnnotationAssertion( "abdomen skin") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "abdomen zone of skin") AnnotationAssertion( "abdominal skin") AnnotationAssertion(Annotation( "FMA:22988") "skin of abdomen proper") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "zone of skin of abdomen") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001416") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "skin of abdomen") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (skin of neck) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A zone of skin that is part of a neck [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37277") AnnotationAssertion( "FMA:23021") AnnotationAssertion( "FMA:23022") AnnotationAssertion( "MA:0000590") AnnotationAssertion( "NCIT:C52756") AnnotationAssertion(Annotation( "ncithesaurus:Neck_Skin") "UMLS:C0205030") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "neck (volume) zone of skin") AnnotationAssertion( "neck skin") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "neck zone of skin") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "zone of skin of neck") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "zone of skin of neck (volume)") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001417") AnnotationAssertion(rdfs:label "skin of neck") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (skin of thorax) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A zone of skin that is part of a thorax [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37765") AnnotationAssertion( "FMA:23028") AnnotationAssertion( "FMA:23029") AnnotationAssertion( "MA:0000564") AnnotationAssertion( "thoracic skin") AnnotationAssertion( "thorax skin") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "thorax zone of skin") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "zone of skin of thorax") AnnotationAssertion( "uberon") AnnotationAssertion( "upper body skin") AnnotationAssertion( "UBERON:0001418") AnnotationAssertion(rdfs:label "skin of thorax") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (skin of limb) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A zone of skin that is part of a limb [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:32726") AnnotationAssertion( "FMA:23100") AnnotationAssertion( "MA:0000694") AnnotationAssertion( "NCIT:C53276") AnnotationAssertion(Annotation( "ncithesaurus:Skin_of_the_Extremity") "UMLS:C1282135") AnnotationAssertion( "limb skin") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "limb zone of skin") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "zone of skin of limb") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001419") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "skin of limb") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (subscapular vein) AnnotationAssertion(Annotation( ) "A vein formed by the confluence of the thoracodorsal and circumflex scapular veins and accompanying the subscapular artery to drain into the axillary vein.") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37190") AnnotationAssertion( "FMA:23113") AnnotationAssertion( "MA:0002224") AnnotationAssertion(Annotation( ) "vena subscapularis") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001420") AnnotationAssertion(rdfs:label "subscapular vein") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA/obol"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA/obol"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (pectoral girdle region) AnnotationAssertion(Annotation( ) Annotation( "FMA:23217") Annotation( "UBERONREF:0000003"^^xsd:string) "An organism subdivision that includes the pectoral girdle skeleton and associated soft tissue. Note that this includes both the skeletal elements and associated tissues (integument, muscle, etc). Examples: There are only two instances in an organism, right and left pectoral girdle regions.") AnnotationAssertion( "this class describes the organism subdivision, NOT the skeleton within. See also: skeleton of pectoral girdle (UBERON:0007831).") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "VSAO:0000305") Annotation( "VSAO"^^xsd:string) Annotation( ) "An organism subdivision that includes the pectoral girdle skeleton. Note that this includes both the skeletal elements and associated tissues (integument, muscle, etc). There is only one instance of the pectoral girdle region per organism.[VSAO]") AnnotationAssertion(Annotation( "2012-09-06"^^xsd:string) Annotation( "VSAO:0000305") Annotation( "VSAO"^^xsd:string) Annotation( "Curator"^^xsd:string) "Note that this class describes the central subdivision of the pectoral girdle complex, NOT the skeleton within.[VSAO]") AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37856") AnnotationAssertion( "FMA:23217") AnnotationAssertion( "VSAO:0000305") AnnotationAssertion( "galen:ShoulderGirdle") AnnotationAssertion(Annotation( "FMA:23217") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "cingulum membri superioris") AnnotationAssertion( "girdle - pectoral") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) "cingulum membri superioris") AnnotationAssertion(Annotation( "FMA:23217") "shoulder girdle") AnnotationAssertion(Annotation( "FMA:23217") "upper limb girdle") AnnotationAssertion( "uberon") AnnotationAssertion( "pectoral girdle") AnnotationAssertion( "pectoral region") AnnotationAssertion( "UBERON:0001421") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "pectoral girdle region") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses( ) # Class: (facial lymphatic vessel) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A lymphatic vessel that is part of a face [Automatically generated definition].") AnnotationAssertion( "FMA:233946") AnnotationAssertion( "TAO:0005108") AnnotationAssertion( "ZFA:0005108") AnnotationAssertion( "buccal lymphatic vessel") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "face lymph vessel") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "face lymphatic vessel") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "lymph vessel of face") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "lymphatic vessel of face") AnnotationAssertion( "uberon") AnnotationAssertion( "FL") AnnotationAssertion( "UBERON:0001422") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "facial lymphatic vessel") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (radius bone) AnnotationAssertion(Annotation( "PHENOSCAPE:mah") "The major preaxial endochondral bone in the anterior zeugopod[Phenoscape].") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0000788") Annotation( "AAO"^^xsd:string) Annotation( "AAO:LAP"^^xsd:string) "One of the two long bones of endochondral origin of the fore-epipodium; it is located on the lateral side of the ulna. Its upper end articulates with both the humerus and the ulna, whereas the lower articulates with the carpals.[AAO]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0000788") AnnotationAssertion( "CALOHA:TS-2199") AnnotationAssertion( "EMAPA:19103") AnnotationAssertion( "FMA:23463") AnnotationAssertion( "GAID:185") AnnotationAssertion( "MA:0001357") AnnotationAssertion( "MESH:A02.835.232.087.702") AnnotationAssertion( "NCIT:C12777") AnnotationAssertion( "OpenCyc:Mx4rwUsDcZwpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Radius_Bone") "UMLS:C0034627") AnnotationAssertion( "VSAO:0005012") AnnotationAssertion( "galen:Radius") AnnotationAssertion(Annotation( "MA:0001357") "radius") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001423") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "Due to the presence of the radius in Tetrpodomorph fish this element is not inherently linked to the presence of digits or flexor musculature. The corresponding bone in the posterior fin/limb is the tibia.[Phenoscape]. In four-legged animals, the radius is the main load-bearing bone of the lower forelimb. Its structure is similar in most terrestrial tetrapods, but it may be fused with the ulna in some mammals (such as horses) and reduced or modified in animals with flippers or vestigial forelimbs [ISBN:0-03-910284-X]") AnnotationAssertion(rdfs:label "radius bone") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "definitional"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (ulna) AnnotationAssertion(Annotation( "PHENOSCAPE:mah") "The major postaxial endochondral bone in the anterior zeugopod[Phenoscape].") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0000789") Annotation( "AAO"^^xsd:string) Annotation( "AAO:LAP"^^xsd:string) "One of the two long bones of endochondral origin of the fore-epipodium; it is located on the medial (inner) side of the radius. The upper end of the ulna articulates with the lower end of the humerus forming a strong hinge joint with the carpals, whereas the lower articulates with the carpals.[AAO]") AnnotationAssertion( "ulnar") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0000789") AnnotationAssertion( "EMAPA:19104") AnnotationAssertion( "FMA:23466") AnnotationAssertion( "GAID:188") AnnotationAssertion( "MA:0001358") AnnotationAssertion( "MESH:A02.835.232.087.911") AnnotationAssertion( "NCIT:C12809") AnnotationAssertion( "OpenCyc:Mx4rwPtIM5wpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Ulna") "UMLS:C0041600") AnnotationAssertion( "VSAO:0005013") AnnotationAssertion( "galen:Ulna") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001424") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "The corresponding bone in the posterior fin/limb is the fibula.") AnnotationAssertion(rdfs:label "ulna") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/6/67/Illu_upper_extremity.jpg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "definitional"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (pectoral lymphatic vessel) AnnotationAssertion( "FMA:234865") AnnotationAssertion( "TAO:0005107") AnnotationAssertion( "ZFA:0005107") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "PL") AnnotationAssertion( "UBERON:0001425") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "pectoral lymphatic vessel") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (jugular lymphatic vessel) AnnotationAssertion(Annotation( "ZFA:0005109") Annotation( ) "JLV") AnnotationAssertion( "FMA:234908") AnnotationAssertion( "TAO:0005109") AnnotationAssertion( "ZFA:0005109") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "JL") AnnotationAssertion( "UBERON:0001426") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "jugular lymphatic vessel") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (radiale) AnnotationAssertion(Annotation( ) Annotation( "UBERON:mah") "Endochondral proximal carpal bone articulating with the radius.") AnnotationAssertion( "TODO - check AAO placement; in rodents this is fused with the lunate to make the scapholunate") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0000790") Annotation( "AAO"^^xsd:string) Annotation( "AAO:LAP"^^xsd:string) "One of two element that constitute the basal row of carpals. It articulates proximally with the radius, mesially with the ulnare (or pars intermedia of the ulnare when the ulnare is fused to the intermedium) and distally with the centrale (also recognized by some authors as element Y). This element originates from one or two condensation centers. Occasionally it may fuse to carpal 5(4), the ulnare, or other elements.[AAO]") AnnotationAssertion(Annotation( "MP:0010775,MGI:llw2") "the bone of the hand located at the radial side of the carpus and which articulates with the radius, trapezium, trapezoideum, capitate, and lunate bones") AnnotationAssertion( "In reptiles, birds, and amphibians, this bone is instead commonly referred to as the radiale, because of its articulation with the radius[WP]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0000790") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37660") AnnotationAssertion( "FMA:23709") AnnotationAssertion( "GAID:180") AnnotationAssertion( "MA:0002555") AnnotationAssertion( "MESH:A02.835.232.087.144.650") AnnotationAssertion( "NCIT:C12854") AnnotationAssertion( "OpenCyc:Mx4rwAwWe5wpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Scaphoid_Bone") "UMLS:C0223724") AnnotationAssertion( "galen:Scaphoid") AnnotationAssertion( "navicular bone of hand") AnnotationAssertion( "navicular bone of manus") AnnotationAssertion( "navicular of manus") AnnotationAssertion( "os carpi radiale") AnnotationAssertion(Annotation( ) "os naviculare manus") AnnotationAssertion(Annotation( ) "os scaphoideum") AnnotationAssertion( "radial carpal bone") AnnotationAssertion(Annotation( ) Annotation( "MA:0002555") Annotation( "NCBITaxon:40674") "scaphoid") AnnotationAssertion( "scaphoid bone") AnnotationAssertion(Annotation( ) "scaphoideum") AnnotationAssertion( "uberon") AnnotationAssertion( "navicular of hand") AnnotationAssertion( "UBERON:0001427") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "radiale") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/5/50/Carpus.png"^^xsd:anyURI) SubClassOf( ) # Class: (intermedium) AnnotationAssertion(Annotation( ) Annotation( "UBERON:mah") "Endochondral carpal bone articulating with the ulnare and the radiale.") AnnotationAssertion( "articulating with the ulnare and the radiale[VSAO]. human articulations: radius proximally capitate and hamate distally scaphoid laterally triangular medially") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( ) "intermedium") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37659") AnnotationAssertion( "FMA:23712") AnnotationAssertion( "GAID:181") AnnotationAssertion( "MA:0002556") AnnotationAssertion( "MESH:A02.835.232.087.144.663") AnnotationAssertion( "NCIT:C12786") AnnotationAssertion(Annotation( "ncithesaurus:Lunate_Bone") "UMLS:C0036624") AnnotationAssertion( "VSAO:0005040") AnnotationAssertion( "galen:Lunate") AnnotationAssertion(Annotation( "VSAO:0005040") "lunar") AnnotationAssertion(Annotation( "MA:0002556") Annotation( "NCBITaxon:40674") Annotation( ) "lunate") AnnotationAssertion( "lunate bone") AnnotationAssertion( "os carpi intermedium") AnnotationAssertion(Annotation( "VSAO:0005040") Annotation( ) "os lunatum") AnnotationAssertion( "semilunar bone") AnnotationAssertion( "uberon") AnnotationAssertion( "intermediate carpal bone") AnnotationAssertion(Annotation( ) Annotation( ) "os lunatum") AnnotationAssertion( "semilunar") AnnotationAssertion( "semilunate") AnnotationAssertion( "UBERON:0001428") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "intermedium") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/5/50/Carpus.png"^^xsd:anyURI) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pisiform) AnnotationAssertion(Annotation( ) Annotation( "PHENOSCAPE:ad"^^xsd:string) "A laterally positioned sesamoid bone found in close proximity with and occasionally fused to the ulnare.") AnnotationAssertion( "check: accessory carpal") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:36165") AnnotationAssertion( "FMA:23718") AnnotationAssertion( "MA:0001339") AnnotationAssertion( "NCIT:C12855") AnnotationAssertion( "OpenCyc:Mx4rvtByTZwpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Pisiform_Bone") "UMLS:C0223729") AnnotationAssertion( "galen:Pisiform") AnnotationAssertion(Annotation( "FMA:23718") "pisiform bone") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "MA:0001339") "accessory carpal bone") AnnotationAssertion(Annotation( ) Annotation( ) "os pisiforme") AnnotationAssertion( "UBERON:0001429") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "pisiform") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/5/50/Carpus.png"^^xsd:anyURI) SubClassOf(Annotation( "FMA"^^xsd:string) Annotation( "MA"^^xsd:string) ) SubClassOf( ) # Class: (distal carpal bone 1) AnnotationAssertion(Annotation( "WP"^^xsd:string) "located between radiale and first metacarpal[VSAO]. in humans - The capitate articulates with 1st metacarpal distally, scaphoid proximally, trapezoid medially, 2nd metacarpal medially") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010634") AnnotationAssertion( "EMAPA:36173") AnnotationAssertion( "FMA:23721") AnnotationAssertion( "MA:0001340") AnnotationAssertion( "NCIT:C12857") AnnotationAssertion( "OpenCyc:Mx4rv3CbrJwpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Trapezial_Bone") "UMLS:C0223736") AnnotationAssertion( "VSAO:0005043") AnnotationAssertion( "galen:Trapezium") AnnotationAssertion(Annotation( "VSAO:0005043") "distal carpal 1") AnnotationAssertion( "greater multangular bone") AnnotationAssertion(Annotation( "VSAO:0005043") "os trapezium") AnnotationAssertion(Annotation( "FMA:23721") "trapezial bone") AnnotationAssertion(Annotation( "VSAO:0005043") "trapezium") AnnotationAssertion(Annotation( "FMA:23721") "trapezium bone") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "AAO:0010634") "carpal 1") AnnotationAssertion( "greater multangular") AnnotationAssertion(Annotation( "MA:0001340") "greater multiangular") AnnotationAssertion(Annotation( "MA:0001340") "hand distal carpal bone 1") AnnotationAssertion( "manus distal carpal bone 1") AnnotationAssertion( "UBERON:0001430") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "distal carpal bone 1") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (distal carpal bone 2) AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0000848") Annotation( "AAO"^^xsd:string) Annotation( "AAO:LAP"^^xsd:string) "Small element that articulates with the prepollex, metacarpal II(I) and metacarpal III(II). It may be fused to element Y or carpal 3(2).[AAO]") AnnotationAssertion(Annotation( ) "The trapezoid bone (lesser multangular bone) is a carpal bone in tetrapods, including humans. It is the smallest bone in the distal row. It may be known by its wedge-shaped form, the broad end of the wedge constituting the dorsal, the narrow end the palmar surface; and by its having four articular facets touching each other, and separated by sharp edges. It is homologous with the 'second distal carpal' of reptiles and amphibians. The etymology derives from the Greek trapezion which means 'irregular quadrilateral,' from tra- 'four' and peza 'foot' or 'edge. ' Literally, 'a little table' from trapeza meaning 'table' and -oeides 'shaped.[Wikipedia:Trapezoid_bone]") AnnotationAssertion(Annotation( "AAO"^^xsd:string) "located in the distal part of the carpus and articulating with the second metacarpal, the distal carpals 1 and 2 and the radiale.[VSAO] in humans - The capitate articulates with 2nd metacarpal distally, scaphoid proximally, trapezium medially, capitate medially[WP] Amphibians: Small element that articulates with the prepollex, metacarpal II(I) and metacarpal III(II). It may be fused to element Y or carpal 3(2)") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0000848") AnnotationAssertion( "EMAPA:36174") AnnotationAssertion( "FMA:23724") AnnotationAssertion( "MA:0001341") AnnotationAssertion( "NCIT:C12859") AnnotationAssertion( "OpenCyc:Mx4rvVvsjpwpEbGdrcN5Y29ycA") AnnotationAssertion( "OpenCyc:Mx4rvxNWBJwpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Trapezoid_Bone") "UMLS:C0223741") AnnotationAssertion( "VSAO:0005044") AnnotationAssertion( "galen:Trapezoid") AnnotationAssertion(Annotation( "VSAO:0005044") "distal carpal 2") AnnotationAssertion(Annotation( "FMA:23724") "lesser multangular bone") AnnotationAssertion(Annotation( "VSAO:0005044") "os trapezoideum") AnnotationAssertion(Annotation( "VSAO:0005044") "trapezoid") AnnotationAssertion(Annotation( "FMA:23724") "trapezoid bone") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "AAO:0000848") "carpal 2") AnnotationAssertion(Annotation( "MA:0001341") "hand distal carpal bone 2") AnnotationAssertion( "lesser multangular") AnnotationAssertion(Annotation( "MA:0001341") "lesser multiangular") AnnotationAssertion( "manus distal carpal bone 2") AnnotationAssertion( "UBERON:0001431") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "distal carpal bone 2") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (distal carpal bone 3) AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0000849") Annotation( "AAO"^^xsd:string) Annotation( "AAO:LAP"^^xsd:string) "Small element that articulates anteriorly with metacarpal III(II). It may be fused to carpals 2(1), 4(3), 5(4), or other elements.[AAO]") AnnotationAssertion(Annotation( "WP"^^xsd:string) "medially located and articulates with metacarpals 2-4, distal carpal 5 and the intermedium[VSAO] In the human hand, the capitate bone is the largest of the carpal bones, and occupies the center of the wrist - The capitate articulates with seven bones: the scaphoid and lunate proximally, the second metacarpal, third metacarpal, and fourth metacarpal distally, the lesser multangular on the radial side, and the hamate on the ulnar side") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0000849") AnnotationAssertion( "EMAPA:36169") AnnotationAssertion( "FMA:23727") AnnotationAssertion( "MA:0001342") AnnotationAssertion( "NCIT:C12856") AnnotationAssertion( "OpenCyc:Mx4rvZFPrZwpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Capitate_Bone") "UMLS:C0223733") AnnotationAssertion( "VSAO:0005045") AnnotationAssertion( "galen:Capitate") AnnotationAssertion(Annotation( "MA:0001342") "capitate") AnnotationAssertion(Annotation( "FMA:23727") "capitate bone") AnnotationAssertion(Annotation( "VSAO:0005045") "distal carpal 3") AnnotationAssertion(Annotation( "FMA:23727") "os magnum (carpus)") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "AAO:0000849") "carpal 3") AnnotationAssertion(Annotation( "MA:0001342") "hand distal carpal bone 3") AnnotationAssertion(Annotation( "VSAO:0005045") "magnum") AnnotationAssertion(Annotation( ) "os capitatum") AnnotationAssertion( "os magnum") AnnotationAssertion( "UBERON:0001432") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "distal carpal bone 3") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/5/50/Carpus.png"^^xsd:anyURI) SubClassOf(Annotation( "FMA"^^xsd:string) Annotation( "palaeos") ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (distal carpal bone 4) AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0000850") Annotation( "AAO"^^xsd:string) Annotation( "AAO:LAP"^^xsd:string) "Small element that articulates anteriorly with metacarpal IV(III). It may be fused to carpal 3(2), 5(4), or other elements.[AAO]") AnnotationAssertion(Annotation( "AAO"^^xsd:string) "articulates with the lunar, distal carpal 3, the ulnare as well as metacarpals 4 and 5.[VSAO]. In the human hand the lunate proximally the fourth and fifth metacarpals distally the triangular medially the capitate laterally[WP] Amphibians: Small element that articulates anteriorly with metacarpal IV(III). It may be fused to carpal 3(2), 5(4), or other elements") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0000850") AnnotationAssertion( "EMAPA:36172") AnnotationAssertion( "FMA:23730") AnnotationAssertion( "MA:0001343") AnnotationAssertion( "NCIT:C12860") AnnotationAssertion( "OpenCyc:Mx4rwFTmuJwpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Hamate_Bone") "UMLS:C0560737") AnnotationAssertion( "VSAO:0005046") AnnotationAssertion( "galen:Hamate") AnnotationAssertion(Annotation( "VSAO:0005046") "distal carpal 4") AnnotationAssertion(Annotation( "MA:0001343") "hamate") AnnotationAssertion(Annotation( "FMA:23730") "hamate bone") AnnotationAssertion(Annotation( "FMA:23730") "unciform bone") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "AAO:0000850") "carpal 4") AnnotationAssertion(Annotation( "MA:0001343") "hand distal carpal bone 4") AnnotationAssertion(Annotation( ) Annotation( ) "os hamatum") AnnotationAssertion(Annotation( "VSAO:0005046") "os hamatum") AnnotationAssertion(Annotation( "MA:0001343") "unciform") AnnotationAssertion(Annotation( "MA:0001343") "uncinate") AnnotationAssertion( "UBERON:0001433") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "distal carpal bone 4") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/5/50/Carpus.png"^^xsd:anyURI) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (skeletal system) AnnotationAssertion(Annotation( ) Annotation( "GO_REF:0000034"^^xsd:string) Annotation( "VSAO:0000027") "Anatomical system that is a multi-element, multi-tissue anatomical cluster that consists of the skeleton and the articular system.") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0000434") Annotation( "TAO"^^xsd:string) Annotation( "TAO:wd"^^xsd:string) "Anatomical system consisting of multiple elements and tissues that provides physical support.[TAO]") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "VSAO:0000027") Annotation( "VSAO"^^xsd:string) Annotation( "GO_REF:0000034, http://dx.plos.org/10.1371/journal.pone.0051070") Annotation( "PSPUB:0000170"^^xsd:string) "Anatomical system that is a multi-element, multi-tissue anatomical cluster that consists of the skeleton and the articular system.[VSAO]") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0000566") Annotation( "AAO"^^xsd:string) Annotation( "AAO:LAP"^^xsd:string) "System that provides physical support to the organism.[AAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001254") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "DOI:10.1159/000324245 Donoghue PCJ, Sansom IJ, Origin and early evolution of vertebrate skeletonization. Microscopy research and technique (2002)") "By taking a holistic approach, integration of the evidence from molecular and developmental features of model organisms, the phylogenetic distribution in the 'new animal phylogeny' and the earliest fossilized remains of mineralized animal skeletons suggests independent origins of the skeleton at the phylum level.[debated][VHOG]") AnnotationAssertion( "skeletal") AnnotationAssertion(Annotation( "GO") "GO defines skeletal system very generically: The skeleton is the bony framework of the body in vertebrates (endoskeleton) or the hard outer envelope of insects (exoskeleton or dermoskeleton) GO:0001501; however, all annotations are to vertebrates") AnnotationAssertion( ) AnnotationAssertion( "AAO:0000566") AnnotationAssertion( "BTO:0001486") AnnotationAssertion( "CALOHA:TS-1320") AnnotationAssertion( "EFO:0000806") AnnotationAssertion( "EHDAA2:0003168") AnnotationAssertion( "EMAPA:35773") AnnotationAssertion( "FMA:23881") AnnotationAssertion( "MA:0000018") AnnotationAssertion( "NCIT:C12788") AnnotationAssertion( "OpenCyc:Mx4rvVi1rpwpEbGdrcN5Y29ycA") AnnotationAssertion( "TAO:0000434") AnnotationAssertion(Annotation( "ncithesaurus:Skeletal_System") "UMLS:C0037253") AnnotationAssertion( "VHOG:0001254") AnnotationAssertion( "VSAO:0000027") AnnotationAssertion( "XAO:0003060") AnnotationAssertion( "ZFA:0000434") AnnotationAssertion( "skeleton system") AnnotationAssertion(Annotation( ) "set of all bones and joints") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0001486") "Skelettsystem") AnnotationAssertion( "UBERON:0001434") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "skeletal system") AnnotationAssertion(rdfs:seeAlso "https://github.com/obophenotype/uberon/wiki/The-skeletal-system"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses( ) DisjointClasses( ) DisjointClasses( ) DisjointClasses( ) DisjointClasses( ) DisjointClasses( ) DisjointClasses( ) DisjointClasses( ) DisjointClasses( ) # Class: (carpal bone) AnnotationAssertion(Annotation( ) "A bone that is part of the carpal skeleton. Examples: scaphoid, lunate, capitate[cjm].") AnnotationAssertion(Annotation( ) "In tetrapods, the carpals is the sole cluster of the bones in the wrist between the radius and ulna and the metacarpus. The bones of the carpus do not belong to individual fingers (or toes in quadrupeds), whereas those of the metacarpus do. The corresponding part of the foot is the tarsus. The carpal bones allow the wrist to move and rotate vertically, horizontally and laterally. In human anatomy, the main role of the carpus is to facilitate effective positioning of the hand and powerful use of the extensors and flexors of the forearm, but the mobility of individual carpal bones increase the freedom of movements at the wrist.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:25056") AnnotationAssertion( "FMA:23889") AnnotationAssertion( "GAID:179") AnnotationAssertion( "MA:0000296") AnnotationAssertion( "MESH:A02.835.232.087.144") AnnotationAssertion( "NCIT:C12688") AnnotationAssertion(Annotation( "ncithesaurus:Carpal_Bone") "UMLS:C0007285") AnnotationAssertion( "galen:CarpalBone") AnnotationAssertion( "bone of carpus") AnnotationAssertion(Annotation( "PHENOSCAPE:ad"^^xsd:string) "carpal") AnnotationAssertion( "carpal skeleton bone") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "EMAPA:25056") "carpus bone") AnnotationAssertion( "UBERON:0001435") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "carpal bone") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/5/58/Carpus.svg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses( ) # Class: (phalanx of manus) AnnotationAssertion(Annotation( ) Annotation( ) "A phalanx that is part of a forelimb autopod[Automatically generated definition].") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0000947") Annotation( "AAO"^^xsd:string) Annotation( "AAO:LAP"^^xsd:string) "Dumb-bell shaped bones of endochondral origin with cartilaginous epiphyses that make the four digits of the manus. The terminal phalanges are much smaller than the proximal and penultimate phalanges. The typical phalangeal formula of the manus, in a medial to lateral sequence, is 2-2-3-3.[AAO]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0000947") AnnotationAssertion( "EMAPA:32650") AnnotationAssertion( "FMA:23914") AnnotationAssertion( "MA:0000306") AnnotationAssertion( "NCIT:C52771") AnnotationAssertion(Annotation( "ncithesaurus:Hand_Phalanx") "UMLS:C0223792") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "digitus manus phalanx") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "finger phalanx") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "hand digit phalanx") AnnotationAssertion(Annotation( "MA:0000306") "hand phalanx") AnnotationAssertion( "manual phalanx") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "phalanx of digit of hand") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "phalanx of digitus manus") AnnotationAssertion(Annotation( "FMA:23914") "phalanx of finger") AnnotationAssertion( "phalanx of fore digit") AnnotationAssertion( "phalanx of hand") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "phalanx of hand digit") AnnotationAssertion( "phalanx of manual digit") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "digital bone of manus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:23914") "bone of finger") AnnotationAssertion(Annotation( "AAO:0000947") Annotation( ) "phalanges of fore digit") AnnotationAssertion( "UBERON:0001436") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "phalanx of manus") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (epiphysis) AnnotationAssertion(Annotation( ) Annotation( "MESH:A02.835.232.251") "The head of a long bone that articulates with a neighboring skeletal element and is separated from the shaft by the epiphyseal plate until bone growth stops. At that time, the plate disappears and the head and shaft are united[MESH,modified].") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0000742") Annotation( "AAO"^^xsd:string) Annotation( "AAO:Pugener_2002") "Cartilaginous expansion at the distal end of an anterior rib or transverse process that serves for the attachment of muscles suspending the pectoral girdle to the vertebral column.[AAO]") AnnotationAssertion(Annotation( "FMA:24012") "Subdivision of long bone which forms its expanded proximal or distal articular end; together with other the subdivisions of long bone, it constitutes the long bone. Examples: proximal epiphysis of humerus, distal epiphysis of femur.") AnnotationAssertion( "epiphyseal") AnnotationAssertion( "epiphysial") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0000742") AnnotationAssertion( "BTO:0000413") AnnotationAssertion( "EMAPA:35508") AnnotationAssertion( "FMA:24012") AnnotationAssertion( "MA:0001362") AnnotationAssertion( "MESH:D004838") AnnotationAssertion( "NCIT:C32529") AnnotationAssertion( "NCIT:C52722") AnnotationAssertion(Annotation( "ncithesaurus:Long_Bone_Epiphysis") "UMLS:C1708734") AnnotationAssertion( "bone epiphysis") AnnotationAssertion( "end of long bone") AnnotationAssertion(Annotation( ) "epiphyses") AnnotationAssertion( "long bone epiphysis") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001437") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "epiphysis") AnnotationAssertion(rdfs:seeAlso ) AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/9/94/Illu_long_bone.jpg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (metaphysis) AnnotationAssertion(Annotation( ) Annotation( "FMA:24014") "Zone of long bone that is between the epiphysis and diaphysis. Subdivision of diaphysis which forms the proximal or distal end of diaphysis next to the epiphysis; together with diaphysis proper, it constitutes the diaphysis. Examples: proximal metaphysis of humerus, distal metaphysis of femur.[FMA].") AnnotationAssertion( "todo - decide - adjacent to or containing epiphyseal plate? AO Notes: FMA the metaphysis is part of the diaphysis, but not in MA.") AnnotationAssertion(Annotation( "FMA:24014") "Subdivision of diaphysis which forms the proximal or distal end of diaphysis next to the epiphysis; together with diaphysis proper, it constitutes the diaphysis. Examples: proximal metaphysis of humerus, distal metaphysis of femur.[FMA]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:35509") AnnotationAssertion( "FMA:24014") AnnotationAssertion( "MA:0001363") AnnotationAssertion( "NCIT:C52723") AnnotationAssertion(Annotation( "ncithesaurus:Metaphysis") "UMLS:C0222671") AnnotationAssertion( "diaphyseal end of long bone") AnnotationAssertion( "long bone metaphysis") AnnotationAssertion(Annotation( ) "metaphyses") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001438") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "metaphysis") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (compact bone tissue) AnnotationAssertion(Annotation( "ISBN:0-683-40008-8"^^xsd:string) Annotation( "MGI:hdene") Annotation( "MP:0003797") "The outer layers of solid, hard bone that covers spongy bone; consists of parallel osteons containing mineral deposits and interstitial lamellae.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:35250") AnnotationAssertion( "FMA:24018") AnnotationAssertion( "MA:0001461") AnnotationAssertion( "NCIT:C52714") AnnotationAssertion(Annotation( "ncithesaurus:Cortical_Bone") "UMLS:C0222661") AnnotationAssertion( "galen:CorticalBone") AnnotationAssertion(Annotation( "HP:0002753") "bony cortex") AnnotationAssertion(Annotation( "MA:0001461") "compact bone") AnnotationAssertion( "compact bone tissue") AnnotationAssertion( "cortical bone") AnnotationAssertion( "cortical bone tissue") AnnotationAssertion( "cortical region of bone") AnnotationAssertion(Annotation( "FMA:24018") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "substantia compacta") AnnotationAssertion( "substantia compacta (pars ossea)") AnnotationAssertion(Annotation( "FMA:24018") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "substantia corticalis") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001439") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "MP distinguishes compact/cortical bone. in other AOs they are syns") AnnotationAssertion(rdfs:label "compact bone tissue") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses( ) # Class: (forelimb skeleton) AnnotationAssertion(Annotation( ) "The collection of all skeletal elements in a free forelimb region. Excludes the pectoral girdle.") AnnotationAssertion( "TODO - find a home for: FMA:24139 ! skeleton of upper limb") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0000202") Annotation( "AAO"^^xsd:string) Annotation( "AAO:LAP"^^xsd:string) "Skeletal structure of the paired, anterior appendages.[AAO]") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0000202") Annotation( "AAO"^^xsd:string) "relationship type change: differentiates_from lateral plate mesoderm (AAO:0010574) CHANGED TO: develops_from lateral plate mesoderm (UBERON:0003081)[AAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001256") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0198540472 Janvier P, Early vertebrates (1996) p.268"^^xsd:string) "Most anatomists now agree that the three proximal bones of the tetrapod limbs are homologous to the two or three proximal elements of the paired fin skeleton of other sarcopterygians, that is the humerus-femur, radius-tibia, and ulna-fibula.[well established][VHOG]") AnnotationAssertion( "AAO:0000202") AnnotationAssertion( "EHDAA2:0002222") AnnotationAssertion( "EMAPA:32623") AnnotationAssertion( "FMA:24142") AnnotationAssertion( "VHOG:0001256") AnnotationAssertion( "VSAO:0000151") AnnotationAssertion( "XAO:0003061") AnnotationAssertion( "bones of upper limb") AnnotationAssertion( "fore limb skeleton") AnnotationAssertion(Annotation( "VHOG:0001256") "forelimb skeleton") AnnotationAssertion(Annotation( "FMA:24142") "free upper limb skeleton") AnnotationAssertion(Annotation( "FMA:24139") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "ossa membri superioris") AnnotationAssertion( "pectoral limb skeleton") AnnotationAssertion( "set of bones of upper limb") AnnotationAssertion( "skeleton of forelimb") AnnotationAssertion(Annotation( "FMA:24142") "skeleton of free upper limb") AnnotationAssertion( "skeleton of pectoral limb") AnnotationAssertion(Annotation( "FMA:24139") "skeleton of upper limb") AnnotationAssertion(Annotation( "EHDAA2:0002222") "upper limb skeleton") AnnotationAssertion(Annotation( "NCBITaxon:8782"^^xsd:string) Annotation( "OBOL:automatic"^^xsd:string) Annotation( ) "wing skeleton") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001440") AnnotationAssertion(rdfs:label "forelimb skeleton") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (hindlimb skeleton) AnnotationAssertion(Annotation( ) "Subdivision of skeleton consisting of all skeletal elements in an hindlimb region.") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0000217") Annotation( "AAO"^^xsd:string) Annotation( "AAO:LAP"^^xsd:string) "Skeletal structure of the paired, posterior appendages.[AAO]") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0000217") Annotation( "AAO"^^xsd:string) "relationship type change: differentiates_from lateral plate mesoderm (AAO:0010574) CHANGED TO: develops_from lateral plate mesoderm (UBERON:0003081)[AAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001255") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0198540472 Janvier P, Early vertebrates (1996) p.268"^^xsd:string) "Most anatomists now agree that the three proximal bones of the tetrapod limbs are homologous to the two or three proximal elements of the paired fin skeleton of other sarcopterygians, that is the humerus-femur, radius-tibia, and ulna-fibula.[well established][VHOG]") AnnotationAssertion( "AAO:0000217") AnnotationAssertion( "EHDAA2:0002226") AnnotationAssertion( "EMAPA:32633") AnnotationAssertion( "FMA:24144") AnnotationAssertion( "OpenCyc:Mx4rvZcKkZwpEbGdrcN5Y29ycA") AnnotationAssertion( "VHOG:0001255") AnnotationAssertion( "VSAO:0000152") AnnotationAssertion( "XAO:0003062") AnnotationAssertion( "bones of lower limb") AnnotationAssertion(Annotation( "FMA:24144") "free lower limb skeleton") AnnotationAssertion(Annotation( "XAO:0003062") "hind limb skeleton") AnnotationAssertion(Annotation( "VSAO:0000152") "hind-limb skeleton") AnnotationAssertion(Annotation( "VHOG:0001255") "hindlimb skeleton") AnnotationAssertion( "lower limb skeleton") AnnotationAssertion(Annotation( "FMA:24140") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "ossa membri inferioris") AnnotationAssertion( "set of bones of lower limb") AnnotationAssertion(Annotation( "FMA:24144") "skeleton of free lower limb") AnnotationAssertion(Annotation( "FMA:24140") "skeleton of lower limb") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001441") AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "TOOD - find a home for: FMA:24140") AnnotationAssertion(rdfs:label "hindlimb skeleton") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (skeleton of manus) AnnotationAssertion(Annotation( ) Annotation( ) Annotation( "PHENOSCAPE:MAH") "Subdivision of skeleton that is the collection of all skeletal elements in a manus, which is the distal section of the anterior forelimb skeleton consisting of the mesopodium, the metapodium and the acropodium (e.g. including the wrist, palm, and fingers)[Phenoscape].") AnnotationAssertion( "https://github.com/obophenotype/uberon/wiki/Skeleton-partonomy-Design-Pattern"^^xsd:anyURI) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0002227") AnnotationAssertion( "EMAPA:32643") AnnotationAssertion( "FMA:24159") AnnotationAssertion( "OpenCyc:Mx4rvdHPJJwpEbGdrcN5Y29ycA") AnnotationAssertion( "VSAO:0005020") AnnotationAssertion( "anterior autopodium skeleton") AnnotationAssertion(Annotation( "FMA:24159") "bones of hand") AnnotationAssertion( "fore autopod skeleton") AnnotationAssertion( "forelimb autopod skeleton") AnnotationAssertion(Annotation( "EHDAA2:0002227") "hand region skeleton") AnnotationAssertion(Annotation( "FMA:24159") "hand skeleton") AnnotationAssertion( "manual skeleton") AnnotationAssertion( "manus skeleton") AnnotationAssertion(Annotation( "FMA:24159") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "ossa manus") AnnotationAssertion(Annotation( "FMA:24159") "set of bones of hand") AnnotationAssertion(Annotation( "FMA:24159") "skeleton of hand") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "VSAO:0005020") Annotation( "VSAO:NI"^^xsd:string) "anterior autopodium") AnnotationAssertion(Annotation( "VSAO:0005020") Annotation( "VSAO:NI"^^xsd:string) "manus") AnnotationAssertion( "UBERON:0001442") AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "here 'manus' includes both the wrist region, metatarsal region and acropodial region") AnnotationAssertion(rdfs:label "skeleton of manus") SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses(Annotation( "lexical"^^xsd:string) ) # Class: (chest) AnnotationAssertion(Annotation( ) Annotation( "FMA:9576") "Subdivision of trunk proper, which is demarcated from the neck by the plane of the superior thoracic aperture and from the abdomen internally by the inferior surface of the diaphragm and externally by the costal margin and associated with the thoracic vertebral column and ribcage and from the back of the thorax by the external surface of the posterolateral part of the rib cage, the anterior surface of the thoracic vertebral column and the posterior axillary lines; together with the abdomen and the perineum, it constitutes the trunk proper[FMA].") AnnotationAssertion( "FMA:24216 present in FMA1, but gone in subsequent versions") AnnotationAssertion( "pectoral") AnnotationAssertion( "thoracic") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0001368") AnnotationAssertion( "CALOHA:TS-1039") AnnotationAssertion( "EFO:0000965") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37232") AnnotationAssertion( "EV:0100010") AnnotationAssertion( "FMA:9576") AnnotationAssertion( "GAID:91") AnnotationAssertion( "MA:0000031") AnnotationAssertion( "MAT:0000295") AnnotationAssertion( "MESH:A01.911") AnnotationAssertion( "MIAA:0000295") AnnotationAssertion( "NCIT:C12799") AnnotationAssertion( "NCIT:C25389") AnnotationAssertion( "OpenCyc:Mx4rvVikFZwpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Thorax") "UMLS:C0817096") AnnotationAssertion(Annotation( "ncithesaurus:Chest") "UMLS:C1527391") AnnotationAssertion( "galen:Chest") AnnotationAssertion( "galen:Thorax") AnnotationAssertion( "anterolateral part of thorax") AnnotationAssertion( "front of thorax") AnnotationAssertion(Annotation( "FMA:24816") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "pectus") AnnotationAssertion( "ventral part of thoracic region") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "MA:0000031") "thoracic body wall") AnnotationAssertion(Annotation( ) Annotation( ) "thorax") AnnotationAssertion(Annotation( "FMA:9576") "thorax") AnnotationAssertion( "UBERON:0001443") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "chest") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/d/db/Chest.jpg"^^xsd:anyURI) SubClassOf(Annotation( "FMA-modified") ) SubClassOf(Annotation( "FMA"^^xsd:string) Annotation( "MA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (subdivision of head) AnnotationAssertion( ) AnnotationAssertion( "FMA:24218") AnnotationAssertion( "XAO:0000040") AnnotationAssertion( "head subdivision") AnnotationAssertion( "uberon") AnnotationAssertion( "head region") AnnotationAssertion( "region of head") AnnotationAssertion( "UBERON:0001444") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "subdivision of head") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (skeleton of pes) AnnotationAssertion(Annotation( ) Annotation( ) Annotation( "PHENOSCAPE:MAH") "Subdivision of skeleton that is the collection of all skeletal elements in a pes, which is the distal section of the posterior hindlimb skeleton consisting of the mesopodium, the metapodium and the acropodium (e.g. including the ankle, sole, and toes)[Phenoscape].") AnnotationAssertion( "https://github.com/obophenotype/uberon/wiki/Skeleton-partonomy-Design-Pattern"^^xsd:anyURI) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0002228") AnnotationAssertion( "FMA:24222") AnnotationAssertion( "VSAO:0005021") AnnotationAssertion(Annotation( "EHDAA2:0002228") "foot region skeleton") AnnotationAssertion(Annotation( "FMA:24222") "foot skeleton") AnnotationAssertion( "pedal skeleton") AnnotationAssertion( "pes skeleton") AnnotationAssertion( "posterior autopodium skeleton") AnnotationAssertion(Annotation( "FMA:24222") "set of bones of foot") AnnotationAssertion(Annotation( "FMA:24222") "skeleton of foot") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "VSAO:0005021") Annotation( "VSAO:NI"^^xsd:string) Annotation( ) "pes") AnnotationAssertion(Annotation( "VSAO:0005021") Annotation( "VSAO:NI"^^xsd:string) "posterior autopodium") AnnotationAssertion( "UBERON:0001445") AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "here 'pes' includes both the ankle region, metatarsals and acropodial region") AnnotationAssertion(rdfs:label "skeleton of pes") SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (fibula) AnnotationAssertion(Annotation( "PHENOSCAPE:mah") "The major postaxial endochondral bone in the posterior zeugopod[Phenoscape].") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0000891") Annotation( "AAO"^^xsd:string) Annotation( "AAO:LAP"^^xsd:string) "One of the two long bones of endochondral origin of the hind-epipodium; it is a rather more slender bone than the tibia but of about the same length.[AAO]") AnnotationAssertion( "fibular") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0000891") AnnotationAssertion( "BTO:0002346") AnnotationAssertion( "CALOHA:TS-2203") AnnotationAssertion( "EFO:0003052") AnnotationAssertion( "EMAPA:19141") AnnotationAssertion( "FMA:24479") AnnotationAssertion( "GAID:202") AnnotationAssertion( "MA:0001360") AnnotationAssertion( "MESH:A02.835.232.500.321") AnnotationAssertion( "NCIT:C12718") AnnotationAssertion(Annotation( "ncithesaurus:Fibula") "UMLS:C0016068") AnnotationAssertion( "galen:Fibula") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001446") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "fibula") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/1/16/Illu_lower_extremity.jpg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (tarsal bone) AnnotationAssertion(Annotation( ) "A bone that is part of the tarsal skeleton. Examples: calcaneus, talus, centralia.") AnnotationAssertion(Annotation( ) "In primitive tetrapods, such as Trematops, the tarsus consists of three rows of bones. There are three proximal tarsals, the tibiale, intermedium, and fibulare, named for their points of articulation with the bones of the lower limb. These are followed by a second row of four bones, referred to as the centralia (singular: centrale), and then a row of five distal tarsals, each articulating with a single metatarsal. In the great majority of tetrapods, including all of those alive today, this simple pattern is modified by the loss and fusion of various of the bones.[3] In reptiles and mammals, there are normally just two proximal tarsals, the calcaneus (equivalent to the amphibian fibulare) and the talus (probably derived from a fusion of multiple bones). In mammals, including humans, the talus forms a hinge joint with the tibia, a feature especially well developed in the artiodactyls. The calcaneus is also modified, forming a heel for the attachment of the Achilles tendon. Neither of these adaptations is found in reptiles, which have a relatively simple structure to both bones.[3] The fifth distal tarsal disappears relatively early in evolution, with the remainder becoming the cuneiform and cuboid bones. Reptiles usually retain two centralia, while mammals typically have only one (the navicular).[3] In birds, the tarsus has disappeared, with the proximal tarsals having fused with the tibia, the centralia having disappeared, and the distal bones having fused with the metatarsals to form a single tarsometatarsus bone, effectively giving the leg a third segment") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0002343") AnnotationAssertion( "EMAPA:25072") AnnotationAssertion( "FMA:24491") AnnotationAssertion( "GAID:194") AnnotationAssertion( "MA:0000297") AnnotationAssertion( "MESH:A02.835.232.300.710") AnnotationAssertion( "NCIT:C12796") AnnotationAssertion(Annotation( "ncithesaurus:Tarsal_Bone") "UMLS:C0039316") AnnotationAssertion( "galen:TarsalBone") AnnotationAssertion(Annotation( "FMA:24491") "ankle bone") AnnotationAssertion(Annotation( "FMA:24491") "bone of ankle") AnnotationAssertion(Annotation( ) "bone of tarsal skeleton") AnnotationAssertion(Annotation( "FMA:24491") "bone of tarsus") AnnotationAssertion(Annotation( "FMA:71339") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "ossa tarsalia") AnnotationAssertion(Annotation( "FMA:71339") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "ossa tarsi") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0002343") "bony tarsus") AnnotationAssertion(Annotation( "AAO:0000220") "hind mesopodium") AnnotationAssertion(Annotation( "BTO:0002343") "tarsal") AnnotationAssertion(Annotation( "BTO:0002343") "tarsus osseus") AnnotationAssertion( "UBERON:0001447") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "tarsal bone") AnnotationAssertion( "Ankle:en.svg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses( ) # Class: (metatarsal bone) AnnotationAssertion(Annotation( ) "The metatarsus or metatarsal bones are a group of five long bones in the pes located between the tarsal bones of the hind- and mid-pes and the phalanges of the toes. Lacking individual names, the metatarsal bones are numbered from the medial side (side of big toe): the first, second, third, fourth, and fifth metatarsal. The metatarsals are analogous to the metacarpal bones of the manus. [WP,unvetted].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0002347") AnnotationAssertion( "EMAPA:32940") AnnotationAssertion( "EMAPA:36159") AnnotationAssertion( "FMA:24492") AnnotationAssertion( "GAID:193") AnnotationAssertion( "MA:0000303") AnnotationAssertion( "MESH:A02.835.232.300.492") AnnotationAssertion( "NCIT:C12752") AnnotationAssertion(Annotation( "ncithesaurus:Metatarsal_Bone") "UMLS:C0025584") AnnotationAssertion( "galen:Metatarsal") AnnotationAssertion( "metatarsal") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0002347") Annotation( ) "ossa metatarsalia") AnnotationAssertion(Annotation( "BTO:0002347") "ossa metatarsi") AnnotationAssertion( "UBERON:0001448") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "metatarsal bone") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/5/52/Gray291.png"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "true"^^xsd:string) ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (phalanx of pes) AnnotationAssertion(Annotation( ) Annotation( ) "A phalanx that is part of a hindlimb autopod[Automatically generated definition].") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0000930") Annotation( "AAO"^^xsd:string) Annotation( "AAO:LAP"^^xsd:string) "Dumb-bell shaped bones of endochondral origin with cartilaginous epiphyses that make the five digits of the pes. The terminal phalanges are much smaller than the proximal and penultimate phalanges. The typical phalangeal formula of the pes, in a medial to lateral sequence, is 2(1)-2-3-4(3)-3(2).[AAO]") AnnotationAssertion( "UBERON:0004272") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "digital bone of pes") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0000930") AnnotationAssertion( "EMAPA:32941") AnnotationAssertion( "FMA:24493") AnnotationAssertion( "MA:0000305") AnnotationAssertion( "NCIT:C52772") AnnotationAssertion(Annotation( "ncithesaurus:Foot_Phalanx") "UMLS:C0584876") AnnotationAssertion( "ncithesaurus:Phalanx_of_the_Foot") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "digitus pedis phalanx") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "foot digit phalanx") AnnotationAssertion(Annotation( "MA:0000305") "foot phalanx") AnnotationAssertion( "pedal phalanx") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "phalanx of digit of foot") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "phalanx of digitus pedis") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "phalanx of foot digit") AnnotationAssertion( "phalanx of hind digit") AnnotationAssertion( "phalanx of pes") AnnotationAssertion(Annotation( "FMA:24493") "phalanx of toe") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "toe phalanx") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:24493") "bone of toe") AnnotationAssertion(Annotation( "AAO:0000930") Annotation( ) "phalanges of hind digit") AnnotationAssertion( "UBERON:0001449") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "phalanx of pes") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (calcaneus) AnnotationAssertion(Annotation( ) Annotation( "PHENOSCAPE:mah") "The postaxial bone of the proximal tarsals series[Phenoscape].") AnnotationAssertion( "calcaneal") AnnotationAssertion( "synonymous with the fibulare of basal tetrapods.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0002355") AnnotationAssertion( "EMAPA:19134") AnnotationAssertion( "FMA:24496") AnnotationAssertion( "MA:0001348") AnnotationAssertion( "MESH:A02.835.232.300.710.300") AnnotationAssertion( "NCIT:C32250") AnnotationAssertion(Annotation( "ncithesaurus:Calcaneum") "UMLS:C0006655") AnnotationAssertion( "VSAO:0005016") AnnotationAssertion( "galen:Calcaneum") AnnotationAssertion(Annotation( "BTO:0002355") "calcaneal bone") AnnotationAssertion(Annotation( "MA:0001348") "calcaneum") AnnotationAssertion(Annotation( "UBERON:cjm"^^xsd:string) "calcaneus bone") AnnotationAssertion(Annotation( "FMA:24496") Annotation( ) "os calcis") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "calcanei") AnnotationAssertion(Annotation( ) Annotation( "AAO:0000913") Annotation( "ISBN:0073040584"^^xsd:string) Annotation( "VSAO:0005016") "fibulare") AnnotationAssertion(Annotation( "BTO:0002355") "heel bone") AnnotationAssertion(Annotation( "BTO:0002355") "os tarsi fibulare") AnnotationAssertion( "UBERON:0001450") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "calcaneus") AnnotationAssertion( "Subtalar:Joint.PNG"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (navicular bone of pes) AnnotationAssertion(Annotation( "MGI:llw2") Annotation( "MP:0009727") "The oval-shaped tarsal bone found between the talus and the 3 cuneiform bones.") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0000924") Annotation( "AAO"^^xsd:string) Annotation( "AAO:LAP"^^xsd:string) "Oval tarsal element that is located on the center of the mesopodium. It articulates with all other elements of the tarsus except tarsal 5.[AAO]") AnnotationAssertion(Annotation( "WP"^^xsd:string) "connections vary depending on species. AAO: Oval tarsal element that is located on the center of the mesopodium. It articulates with all other elements of the tarsus except tarsal 5. In humans: there is a cuboid instead of distal tarsal 4 and 5 - may articulate laterally with the cuboid") AnnotationAssertion( "centrale") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0000924") AnnotationAssertion( "BTO:0002356") AnnotationAssertion( "EMAPA:36180") AnnotationAssertion( "FMA:24499") AnnotationAssertion( "MA:0001349") AnnotationAssertion( "NCIT:C33162") AnnotationAssertion( "OpenCyc:Mx4rv67esJwpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Navicular_Bone") "UMLS:C0223947") AnnotationAssertion( "galen:Navicular") AnnotationAssertion(Annotation( "AAO:0000924") "centrale (hind)") AnnotationAssertion( "navicular") AnnotationAssertion(Annotation( "FMA:24499") "navicular bone of foot") AnnotationAssertion(Annotation( "FMA:24499") "navicular of foot") AnnotationAssertion( "navicular of pes") AnnotationAssertion(Annotation( "FMA:24499") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "os naviculare") AnnotationAssertion(Annotation( "BTO:0002356") "os naviculare pedis") AnnotationAssertion(Annotation( "NominaAnatomicaVeterinaria:2005"^^xsd:string) Annotation( ) "os tarsi centrale") AnnotationAssertion( "uberon") AnnotationAssertion( "central tarsal bone") AnnotationAssertion(Annotation( ) Annotation( ) "os naviculare") AnnotationAssertion( "UBERON:0001451") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "navicular bone of pes") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/8/81/Gray276.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "numbers vary") ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (distal tarsal bone 1) AnnotationAssertion(Annotation( ) Annotation( "VSAO:0005052") "Endochondral tarsal bone articulating with centralia and metatarsal 1.") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0000918") Annotation( "AAO"^^xsd:string) Annotation( "AAO:LAP"^^xsd:string) "Small element that articulates with the prehallux, metatarsal I and element Y. It may be fused to tarsal 2.[AAO]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0000918") AnnotationAssertion( "BTO:0002360") AnnotationAssertion( "EMAPA:36176") AnnotationAssertion( "FMA:24518") AnnotationAssertion( "MA:0001352") AnnotationAssertion( "NCIT:C32840") AnnotationAssertion( "OpenCyc:Mx4rvYtfH5wpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Internal_Cuneiform_Bone_of_the_Foot") "UMLS:C1512869") AnnotationAssertion( "VSAO:0005052") AnnotationAssertion( "galen:MedialCuneiform") AnnotationAssertion(Annotation( "VSAO:0005052") "cuneiforme 1") AnnotationAssertion(Annotation( "UBERON:cjm"^^xsd:string) Annotation( ) "distal tarsal 1 bone") AnnotationAssertion(Annotation( "VSAO:0005052") "entocuneiforme") AnnotationAssertion(Annotation( ) "first cuneiform") AnnotationAssertion(Annotation( "FMA:24518") "first cuneiform bone") AnnotationAssertion(Annotation( "FMA:24518") "medial cuneiform") AnnotationAssertion(Annotation( "FMA:24518") "medial cuneiform bone") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) Annotation( ) "os cuneiforme mediale") AnnotationAssertion(Annotation( "NominaAnatomicaVeterinaria:2005"^^xsd:string) Annotation( ) "os cuneiforme mediale") AnnotationAssertion(Annotation( "NominaAnatomicaVeterinaria:2005"^^xsd:string) Annotation( ) "os tarsale I") AnnotationAssertion(Annotation( "AAO:0000918") "tarsal 1") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "EMAPA:36176") "1st cuneiform") AnnotationAssertion(Annotation( "VSAO:0005052") "distal tarsal 1") AnnotationAssertion( "foot distal carpal bone 1") AnnotationAssertion(Annotation( ) Annotation( ) "os cuneiform primum") AnnotationAssertion(Annotation( ) Annotation( ) "os cuneiforme mediale") AnnotationAssertion(Annotation( "BTO:0002360") "os cuneiforme primum") AnnotationAssertion(Annotation( "BTO:0002360") "ossa cuneiforme mediale") AnnotationAssertion( "UBERON:0001452") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "distal tarsal bone 1") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/8/81/Gray290.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses(Annotation( "lexical"^^xsd:string) ) # Class: (distal tarsal bone 2) AnnotationAssertion(Annotation( ) Annotation( "VSAO:0005053") "Endochondral tarsal bone articulating with centralia and metatarsal 2.") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0000919") Annotation( "AAO"^^xsd:string) Annotation( "AAO:LAP"^^xsd:string) "Small element that articulates anteriorly with metatarsal II. It may be fused to tarsal 1 or to tarsal 3.[AAO]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0000919") AnnotationAssertion( "BTO:0002359") AnnotationAssertion( "EMAPA:36177") AnnotationAssertion( "FMA:24519") AnnotationAssertion( "MA:0001353") AnnotationAssertion( "NCIT:C33116") AnnotationAssertion(Annotation( "ncithesaurus:Middle_Cuneiform_Bone_of_the_Foot") "UMLS:C1513292") AnnotationAssertion( "VSAO:0005053") AnnotationAssertion( "galen:IntermediateCuneiform") AnnotationAssertion(Annotation( "VSAO:0005053") "cuneiforme 2") AnnotationAssertion(Annotation( "UBERON:cjm"^^xsd:string) Annotation( ) "distal tarsal 2 bone") AnnotationAssertion( "intermediate cuneiform") AnnotationAssertion(Annotation( "VSAO:0005053") "mesocuneiforme") AnnotationAssertion( "middle cuneiform") AnnotationAssertion( "middle cuneiform bone of foot") AnnotationAssertion(Annotation( "NominaAnatomicaVeterinaria:2005"^^xsd:string) Annotation( ) "os cuneiforme intermedium") AnnotationAssertion(Annotation( "NominaAnatomicaVeterinaria:2005"^^xsd:string) Annotation( ) "os tarsale II") AnnotationAssertion( "second cuneiform bone") AnnotationAssertion( "second cuneiform bone of foot") AnnotationAssertion(Annotation( "AAO:0000919") "tarsal 2") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "EMAPA:36177") "2nd cuneiform") AnnotationAssertion(Annotation( "VSAO:0005053") "distal tarsal 2") AnnotationAssertion( "foot distal carpal bone 2") AnnotationAssertion(Annotation( "FMA:24519") "intermediate cuneiform bone") AnnotationAssertion(Annotation( ) Annotation( ) "os cuneiforme intermedium") AnnotationAssertion(Annotation( "BTO:0002359") "os cuneiforme intermedium") AnnotationAssertion(Annotation( ) Annotation( ) "os cuneiforme secundum") AnnotationAssertion(Annotation( "BTO:0002359") "os cuneiforme secundum") AnnotationAssertion( "UBERON:0001453") AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "The intermediate cuneiform (also known as second cuneiform / middle cuneiform) is shaped like a wedge, the thin end pointing downwards. It is situated between the other two cuneiforms (the medial and lateral cuneiforms), and articulates with the navicular posteriorly, the second metatarsal anteriorly and with the other cuneiforms on either side. [WP,unvetted]") AnnotationAssertion(rdfs:label "distal tarsal bone 2") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/5/52/Gray291.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (distal tarsal bone 3) AnnotationAssertion(Annotation( ) Annotation( "VSAO:0005054") "Endochondral tarsal bone articulating with centralia and metatarsal 3.") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0000920") Annotation( "AAO"^^xsd:string) Annotation( "AAO:LAP"^^xsd:string) "Small element that articulates anteriorly with metatarsal III. It may be fused to tarsal 2.[AAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( ) "In some types, the cuneiform is found as two or three bones, in which case the more anterior ('dorsal' in dorsal/plantar terminology) is the ectocuneiform, while the more posterior or plantar bones are the mesocuneiform and entocuneiform.[Palaeos]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0000920") AnnotationAssertion( "BTO:0002358") AnnotationAssertion( "EMAPA:36178") AnnotationAssertion( "FMA:24520") AnnotationAssertion( "MA:0001354") AnnotationAssertion( "NCIT:C32554") AnnotationAssertion( "OpenCyc:Mx4rvoLPu5wpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:External_Cuneiform_Bone_of_the_Foot") "UMLS:C1517036") AnnotationAssertion( "VSAO:0005054") AnnotationAssertion( "galen:LateralCuneiform") AnnotationAssertion(Annotation( "VSAO:0005054") "cuneiforme 3") AnnotationAssertion(Annotation( "UBERON:cjm"^^xsd:string) Annotation( ) "distal tarsal 3 bone") AnnotationAssertion(Annotation( "VSAO:0005054") "ectocuneiforme") AnnotationAssertion(Annotation( ) "external cuneiform") AnnotationAssertion( "external cuneiform bone of foot") AnnotationAssertion( "lateral cuneiform") AnnotationAssertion(Annotation( "FMA:24520") "lateral cuneiform bone") AnnotationAssertion(Annotation( "NominaAnatomicaVeterinaria:2005"^^xsd:string) Annotation( ) "os cuneiforme laterale") AnnotationAssertion(Annotation( "NominaAnatomicaVeterinaria:2005"^^xsd:string) Annotation( ) "os tarsale III") AnnotationAssertion(Annotation( "AAO:0000920") "tarsal 3") AnnotationAssertion( "third cuneiform bone") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "EMAPA:36178") "3rd cuneiform") AnnotationAssertion(Annotation( "VSAO:0005054") "distal tarsal 3") AnnotationAssertion( "foor distal carpal bone 3") AnnotationAssertion(Annotation( ) Annotation( ) "os cuneiforme laterale") AnnotationAssertion(Annotation( ) Annotation( ) "os cuneiforme tertium") AnnotationAssertion(Annotation( "BTO:0002358") "ossa cuneiforme laterale") AnnotationAssertion( "UBERON:0001454") AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "The lateral cuneiform (also known as third cuneiform / external cuneiform) intermediate in size between the other two cuneiform bones, is also wedge-shaped, the base being uppermost. It occupies the center of the front row of the tarsal bones, between the second cuneiform medially, the cuboid laterally, the navicular posteriorly and the third metatarsal in front. [WP,unvetted]") AnnotationAssertion(rdfs:label "distal tarsal bone 3") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/5/52/Gray291.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (cuboid bone) AnnotationAssertion(Annotation( ) "A tarsal bone that is formed from distal tarsals 4 and 5. [WP,modified].") AnnotationAssertion( "NominaAnatomicaVeterinaria uses os cuboideum as an official synonym for distal tarsal IV, but some sources also use this as the label for the human cuboid bone which is regarded to be formed from tarsals IV and V. We therefore decline to use exact syns in either case.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0002357") AnnotationAssertion( "EMAPA:36175") AnnotationAssertion( "FMA:24527") AnnotationAssertion( "MA:0001355") AnnotationAssertion( "NCIT:C32414") AnnotationAssertion(Annotation( "ncithesaurus:Cuboid_Bone") "UMLS:C0376381") AnnotationAssertion( "galen:Cuboid") AnnotationAssertion( "cuboid") AnnotationAssertion( "uberon") AnnotationAssertion( "cuboideum") AnnotationAssertion( "distal tarsal bones 4 and 5") AnnotationAssertion( "foot distal tarsal bone 4 and 5") AnnotationAssertion(Annotation( ) Annotation( "BTO:0002357") Annotation( ) "os cuboideum") AnnotationAssertion(Annotation( ) Annotation( ) "os tarsale IV et V") AnnotationAssertion( "UBERON:0001455") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "cuboid bone") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/1/18/Gray274.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (face) AnnotationAssertion(Annotation( ) "A subdivision of the head that has as parts the layers deep to the surface of the anterior surface, including the mouth, eyes, and nose (when present). In vertebrates, this includes the facial skeleton and structures superficial to the facial skeleton (cheeks, mouth, eyeballs, skin of face, etc).") AnnotationAssertion(Annotation( "FMA:24728") "Subdivision of head which consists of the viscerocranium and all layers superficial to it. Examples: There is only one face.") AnnotationAssertion(Annotation( ) Annotation( "HAO:0000316") Annotation( "NCBITaxon:7399") "The area that extends from the median ocellus to the oral foramen[HAO].") AnnotationAssertion( "facial") AnnotationAssertion(Annotation( "vanat.cvm.umn.edu/TFFlectPDFs/LectFaceDevelop.pdf") "The face develops from outward growth of tissue located rostral to the cranium & pharynx. The lower jaw and most of the upper jaw are formed by growth of the first pharyngeal (branchial) arch. The upper incisor region and the nose and forehead (frontal region) are formed from tissue located rostral to the neural tube (frontonasal prominence)") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0003369") AnnotationAssertion( "CALOHA:TS-2216") AnnotationAssertion( "EMAPA:32763") AnnotationAssertion( "FMA:24728") AnnotationAssertion( "GAID:64") AnnotationAssertion( "HAO:0000316") AnnotationAssertion( "MA:0002473") AnnotationAssertion( "MESH:D005145") AnnotationAssertion( "NCIT:C13071") AnnotationAssertion( "OpenCyc:Mx4rvVi5GZwpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Face") "UMLS:C0015450") AnnotationAssertion( "galen:Face") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "facia/facies") AnnotationAssertion(Annotation( "BTO:0003369") "visage") AnnotationAssertion( "UBERON:0001456") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "face") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/5/55/Mona_Lisa_headcrop.jpg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (skin of eyelid) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A zone of skin that is part of a eyelid [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37536") AnnotationAssertion( "FMA:24760") AnnotationAssertion( "MA:0001256") AnnotationAssertion( "NCIT:C52718") AnnotationAssertion(Annotation( "ncithesaurus:Eyelid_Skin") "UMLS:C0222088") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "blepharon zone of skin") AnnotationAssertion( "eyelid skin") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "eyelid zone of skin") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "zone of skin of blepharon") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "zone of skin of eyelid") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001457") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "skin of eyelid") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (skin of lip) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A zone of skin that is part of a lip [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37643") AnnotationAssertion( "FMA:24764") AnnotationAssertion( "MA:0001579") AnnotationAssertion( "NCIT:C12291") AnnotationAssertion(Annotation( "ncithesaurus:Skin_of_the_Lip") "UMLS:C0222101") AnnotationAssertion( "lip skin") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "lip zone of skin") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "zone of skin of lip") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "skin of lips") AnnotationAssertion( "UBERON:0001458") AnnotationAssertion(rdfs:label "skin of lip") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (skin of external ear) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A zone of skin that is part of a external ear [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:35301") AnnotationAssertion( "FMA:24775") AnnotationAssertion( "MA:0001233") AnnotationAssertion( "NCIT:C49481") AnnotationAssertion(Annotation( "ncithesaurus:Ear_Skin") "UMLS:C0222110") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "auricular region of head zone of skin") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "auricular region zone of skin") AnnotationAssertion( "ear skin") AnnotationAssertion( "external ear skin") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "external ear zone of skin") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "outer ear zone of skin") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "zone of skin of auricular region") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "zone of skin of auricular region of head") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "zone of skin of external ear") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "zone of skin of outer ear") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001459") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "skin of external ear") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (arm) AnnotationAssertion(Annotation( ) "The part of the forelimb extending from the shoulder to the autopod[cjm].") AnnotationAssertion( "currently declared as overlapping hand, as AOs disagree over whether some wrist parts are in the arm or hand") AnnotationAssertion( "this class refers to the combination of the stylopod and zeugopod of a forelimb. Sometimes (cf FMA), 'arm' denotes the stylopod only; sometimes (cf MA), 'arm' denotes the part of the forelimb covering both (i.e. shoulder to hand). Also note distinction between arm and forelimb: hand is part of forelimb, but not part of arm") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000339") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0198540472 Janvier P, Early vertebrates (1996) p.268"^^xsd:string) "Most anatomists now agree that the three proximal bones of the tetrapod limbs are homologous to the two or three proximal elements of the paired fin skeleton of other sarcopterygians, that is the humerus-femur, radius-tibia, and ulna-fibula.[well established][VHOG]") AnnotationAssertion( ) AnnotationAssertion( "BTO:0001435") AnnotationAssertion( "CALOHA:TS-2204") AnnotationAssertion( "EFO:0001410") AnnotationAssertion( "EHDAA2:0000140") AnnotationAssertion( "EHDAA:4164") AnnotationAssertion( "EHDAA:6210") AnnotationAssertion( "EHDAA:8275") AnnotationAssertion( "EMAPA:17413") AnnotationAssertion( "GAID:52") AnnotationAssertion( "MA:0000033") AnnotationAssertion( "MESH:A01.378.800") AnnotationAssertion( "MESH:D001132") AnnotationAssertion( "OpenCyc:Mx4rvVjp5ZwpEbGdrcN5Y29ycA") AnnotationAssertion( "VHOG:0000339") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "brachium") AnnotationAssertion(Annotation( "MESH:A01.378.800") "upper extremity") AnnotationAssertion( "UBERON:0001460") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "arm") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/e/ee/Upperarm.jpg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (elbow) AnnotationAssertion(Annotation( ) "The elbow is the region surrounding the elbow-joint-the ginglymus or hinge joint in the middle of the arm. Three bones form the elbow joint: the humerus of the upper arm, and the paired radius and ulna of the forearm. The bony prominence at the very tip of the elbow is the olecranon process of the ulna, and the inner aspect of the elbow is called the antecubital fossa. [WP,unvetted,human-specific].") AnnotationAssertion( "cubital") AnnotationAssertion( "Naming conventions for pod terms under discussion within phenoscape group") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "CALOHA:TS-2222") AnnotationAssertion( "EFO:0003069") AnnotationAssertion( "EHDAA2:0000429") AnnotationAssertion( "EHDAA:4166") AnnotationAssertion( "EHDAA:6212") AnnotationAssertion( "EMAPA:17414") AnnotationAssertion( "FMA:24901") AnnotationAssertion( "GAID:54") AnnotationAssertion( "MA:0000036") AnnotationAssertion( "MESH:D004550") AnnotationAssertion( "OpenCyc:Mx4rvVjjNZwpEbGdrcN5Y29ycA") AnnotationAssertion( "VHOG:0000340") AnnotationAssertion( "galen:Elbow") AnnotationAssertion( "cubital region") AnnotationAssertion( "elbow limb segment") AnnotationAssertion( "elbow region") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "articulatio cubiti") AnnotationAssertion( "UBERON:0001461") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "elbow") AnnotationAssertion( "Elbow:coude.JPG"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (manual digit 1) AnnotationAssertion(Annotation( ) Annotation( "PMCID:PMC2553264") "1st (preaxial) digit of the manus[Wikipedia].") AnnotationAssertion( ) AnnotationAssertion( "Not present in Anurans (Phenotype RCN Oct 2012)") AnnotationAssertion(Annotation( "NCBITaxon:8782") Annotation( "UBERON:0012260") Annotation( ) Annotation( "PhenoscapeRCN") "This class represents the standard tetrapod configuration. Wagner proposes that avian digits I,II,III develop from C2,C3,C4. To support this scheme we have separate classes representing the avian digits (here called alula, manual digit, major digit).") AnnotationAssertion( "digitus 1") AnnotationAssertion(Annotation( ) Annotation( ) "digitus I") AnnotationAssertion(Annotation( ) Annotation( ) "digitus primus") AnnotationAssertion( "digitus primus [I]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010639") AnnotationAssertion( "EHDAA2:0000511") AnnotationAssertion( "EMAPA:17429") AnnotationAssertion( "FMA:24938") AnnotationAssertion( "GAID:58") AnnotationAssertion( "MA:0000454") AnnotationAssertion( "MESH:D013933") AnnotationAssertion( "NCIT:C52834") AnnotationAssertion( "OpenCyc:Mx4rvVjVbpwpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Hand_Digit_1") "UMLS:C0040067") AnnotationAssertion(Annotation( "EMAPA:17429") "digit 1 of fore-paw") AnnotationAssertion( "digit 1 of manus") AnnotationAssertion(Annotation( "EHDAA2:0000511") "finger 1") AnnotationAssertion( "first digit of hand") AnnotationAssertion(Annotation( "AAO:0010639") "fore digit I") AnnotationAssertion(Annotation( "OBOL:accepted"^^xsd:string) "fore limb digit 1") AnnotationAssertion(Annotation( "MA:0000454") "hand digit 1") AnnotationAssertion( "manual digit 1") AnnotationAssertion(Annotation( ) Annotation( ) "manual digit I") AnnotationAssertion(Annotation( ) Annotation( ) "pollex") AnnotationAssertion(Annotation( ) Annotation( ) "alula") AnnotationAssertion(Annotation( ) Annotation( ) "forelimb dewclaw") AnnotationAssertion(Annotation( "NCBITaxon:9606"^^xsd:string) Annotation( "OBOL:accepted"^^xsd:string) Annotation( ) "hand digit 1") AnnotationAssertion(Annotation( ) "thumb") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "EMAPA:17429") "first finger") AnnotationAssertion( "UBERON:0001463") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "manual digit 1") AnnotationAssertion( "Thumbs:up.jpg"^^xsd:anyURI) AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/6/64/Thumb-up.jpg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (hip) AnnotationAssertion(Annotation( ) "The hip region is located lateral to the gluteal region (i.e. the buttock), inferior to the iliac crest, and overlying the greater trochanter of the thigh bone. In adults, three of the bones of the pelvis have fused into the hip bone which forms part of the hip region. The hip joint, scientifically referred to as the acetabulofemoral joint (art. coxae), is the joint between the femur and acetabulum of the pelvis and its primary function is to support the weight of the body in both static (e.g. standing) and dynamic (e.g. walking or running) postures. [WP,modified].") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000346") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0072528305 Kardong KV, Vertebrates: Comparative Anatomy, Function, Evolution (2006) p.333") "The pelvic girdle is never joined by contributions of dermal bone. From its first appearance in placoderms, the pelvic girdle is exclusively endoskeletal. It arose from pterygiophores, perhaps several times, in support of the fin.[well established][VHOG]") AnnotationAssertion( "coxal") AnnotationAssertion(Annotation( "BTO"^^xsd:string) "See notes for shoulder. in BTO this is part of the abdomen - this creates an inconsistency if limb and abdomen are spatially disjoint") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0001457") AnnotationAssertion( "CALOHA:TS-2226") AnnotationAssertion( "EFO:0001929") AnnotationAssertion( "EHDAA2:0000783") AnnotationAssertion( "EHDAA:5153") AnnotationAssertion( "EHDAA:6178") AnnotationAssertion( "EMAPA:17490") AnnotationAssertion( "FMA:24964") AnnotationAssertion( "GAID:47") AnnotationAssertion( "MA:0000045") AnnotationAssertion( "MESH:D006615") AnnotationAssertion( "NCIT:C64193") AnnotationAssertion( "OpenCyc:Mx4rvVjhy5wpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Hip") "UMLS:C0019552") AnnotationAssertion( "VHOG:0000346") AnnotationAssertion( "galen:Hip") AnnotationAssertion(Annotation( "FMA:24964") "hip region") AnnotationAssertion(Annotation( "FMA:24964") "regio coxae") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "coxa") AnnotationAssertion( "UBERON:0001464") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "hip") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/9/9f/Hip.jpg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA-modified") ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) # Class: (knee) AnnotationAssertion(Annotation( ) "A segment of the hindlimb that corresponds to the joint connecting a hindlimb stylopod and zeugopod.") AnnotationAssertion( ) AnnotationAssertion( "BTO:0003595") AnnotationAssertion( "CALOHA:TS-2220") AnnotationAssertion( "EHDAA2:0000895") AnnotationAssertion( "EHDAA:5159") AnnotationAssertion( "EHDAA:6184") AnnotationAssertion( "EMAPA:17493") AnnotationAssertion( "FMA:24974") AnnotationAssertion( "GAID:48") AnnotationAssertion( "MA:0000046") AnnotationAssertion( "MESH:D007717") AnnotationAssertion( "OpenCyc:Mx4rvVjPKZwpEbGdrcN5Y29ycA") AnnotationAssertion( "VHOG:0000347") AnnotationAssertion( "galen:Knee") AnnotationAssertion( "knee region") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001465") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "knee") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/8/8d/Male_Knee_by_David_Shankbone.jpg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pedal digit) AnnotationAssertion(Annotation( ) "A digit that is part of a pes (foot).") AnnotationAssertion( "UBERON:0000027") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0000888") AnnotationAssertion( "BTO:0002348") AnnotationAssertion( "EMAPA:32649") AnnotationAssertion( "FMA:25046") AnnotationAssertion( "GAID:44") AnnotationAssertion( "MA:0000048") AnnotationAssertion( "NCIT:C33788") AnnotationAssertion( "OpenCyc:Mx4rvVjCHZwpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Toe") "UMLS:C0040357") AnnotationAssertion( "XAO:0003035") AnnotationAssertion( "galen:Toe") AnnotationAssertion( "digit of foot") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "digit of terminal segment of lower limb") AnnotationAssertion(Annotation( "FMA:70664") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "digiti pedis") AnnotationAssertion( "digitus pedis") AnnotationAssertion(Annotation( "MA:0000048") "foot digit") AnnotationAssertion(Annotation( "XAO:0003035") "hind digit") AnnotationAssertion(Annotation( "AAO:0000888") "hind_digit") AnnotationAssertion( "hindlimb digit") AnnotationAssertion(Annotation( ) Annotation( ) "pedal digit (phalangeal portion) plus soft tissue") AnnotationAssertion( "pes digit") AnnotationAssertion(Annotation( "FMA:25046") "toe") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "digiti pedis") AnnotationAssertion(Annotation( "BTO:0002348") "digitipedis") AnnotationAssertion( "UBERON:0001466") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "pedal digit") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/5/5e/Toes.jpg"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "PHENOSCAPE:ni"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (shoulder) AnnotationAssertion(Annotation( ) "A subdivision of the pectoral complex consisting of the structures in the region of the shoulder joint (which connects the humerus, scapula and clavicle).") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000342") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0072528305 Kardong KV, Vertebrates: Comparative Anatomy, Function, Evolution (2006) p.332") "(...) endochondral elements of the early tetrapod shoulder develop from two centers of ossification, giving rise to a scapula and a 'coracoid'.[well established][VHOG]") AnnotationAssertion(Annotation( "FMA"^^xsd:string) "In FMA, the shoulder is part of the pectoral girdle region. in MA, shoulder structures like shoulder joints, bones, nerves etc are part of the shoulder and the forelimb. E.g. humerus is a shoulder bone") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "CALOHA:TS-2229") AnnotationAssertion( "EFO:0003068") AnnotationAssertion( "EHDAA2:0001834") AnnotationAssertion( "EHDAA:4180") AnnotationAssertion( "EHDAA:6228") AnnotationAssertion( "EMAPA:17421") AnnotationAssertion( "FMA:25202") AnnotationAssertion( "GAID:60") AnnotationAssertion( "MA:0000038") AnnotationAssertion( "MESH:D012782") AnnotationAssertion( "NCIT:C25203") AnnotationAssertion( "OpenCyc:Mx4rvViCM5wpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Shoulder") "UMLS:C0037004") AnnotationAssertion( "VHOG:0000342") AnnotationAssertion( "galen:Shoulder") AnnotationAssertion( "shoulder region") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "articulatio humeri") AnnotationAssertion( "UBERON:0001467") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "shoulder") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/9/90/Shoulderjoint.PNG"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA-modified") ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) # Class: (intervertebral joint) AnnotationAssertion(Annotation( ) "The joint between adjacent vertebral bodies. May be composed of the nucleus pulposus, annular ligament, and the anterior and posterior longitudinal ligaments.") AnnotationAssertion(Annotation( "FMA"^^xsd:string) "FMA has 'intervertebral joint' as a GAT, and has two distinct classes 'intervertebral symphysis' and 'intervertebral syndesmosis', but note that the latter do not connect the centra") AnnotationAssertion( "vertebral joint") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37622") AnnotationAssertion( "FMA:25511") AnnotationAssertion( "MA:0001514") AnnotationAssertion( "NCIT:C49577") AnnotationAssertion(Annotation( "ncithesaurus:Vertebral_Joint") "UMLS:C1182940") AnnotationAssertion( "inter-centrum joint") AnnotationAssertion( "inter-vertebral joint") AnnotationAssertion(Annotation( "FMA:25511") "intervertebral symphysis") AnnotationAssertion(Annotation( "FMA:25511") "joint of vertebral body") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001468") AnnotationAssertion(rdfs:label "intervertebral joint") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "connects successive pairs of centra") ObjectSomeValuesFrom( )) # Class: (sternoclavicular joint) AnnotationAssertion(Annotation( ) "The sternoclavicular articulation is a double arthrodial joint composed of two portions separated by an articular disc. The parts entering into its formation are the sternal end of the clavicle, the upper and lateral part of the manubrium sterni, and the cartilage of the first rib, visible from the outside as the suprasternal notch. The articular surface of the clavicle is much larger than that of the sternum, and is invested with a layer of cartilage, which is considerably thicker than that on the latter bone. The ligaments of this joint are: Articular capsule Anterior sternoclavicular ligament Posterior sternoclavicular ligament Interclavicular ligament Costoclavicular ligament Articular disk [WP,unvetted].") AnnotationAssertion(Annotation( ) "sternoclavicular") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:19203") AnnotationAssertion( "FMA:25883") AnnotationAssertion( "GAID:270") AnnotationAssertion( "MA:0001507") AnnotationAssertion( "MESH:D013247") AnnotationAssertion( "NCIT:C33615") AnnotationAssertion( "OpenCyc:Mx4rv_eLJZwpEbGdrcN5Y29ycA") AnnotationAssertion( "OpenCyc:Mx4rwI-ZZpwpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Sternoclavicular_Joint") "UMLS:C0038291") AnnotationAssertion( "sterno clavicular joint") AnnotationAssertion(Annotation( ) "sternoclavicular articulation") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "articulatio sternoclavicularis") AnnotationAssertion( "UBERON:0001469") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "sternoclavicular joint") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/3/3f/Gray325.png"^^xsd:anyURI) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ) SubClassOf(Annotation( "clavicular notch of the manubrium sterni") ObjectSomeValuesFrom( )) SubClassOf(Annotation( "sternal end of the clavicle and first rib") ObjectSomeValuesFrom( )) # Class: (glenohumeral joint) AnnotationAssertion(Annotation( ) "The glenohumeral joint, commonly known as the shoulder joint, is a multiaxial synovial ball and socket joint and involves articulation between the glenoid fossa of the scapula (shoulder blade) and the head of the humerus (upper arm bone). [WP,unvetted].") AnnotationAssertion( "note that in this ontology 'glenoid fossa' is a cavity (consistent with FMA) - consider adding a class for the surface of the scapula that is adjacent to this cavity, and making a more explicit connects relationship") AnnotationAssertion(Annotation( "FMA"^^xsd:string) "in FMA, this is part of the bony pectoral girdle, alongside the skeleton of pectoral girdle") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "joint of shoulder") AnnotationAssertion(Annotation( "MA:0000459") "shoulder joint") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:19105") AnnotationAssertion( "FMA:25912") AnnotationAssertion( "GAID:269") AnnotationAssertion( "MA:0000459") AnnotationAssertion( "MESH:D012785") AnnotationAssertion( "NCIT:C33548") AnnotationAssertion( "OpenCyc:Mx4rwP32BZwpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Shoulder_Joint") "UMLS:C0037009") AnnotationAssertion( "VHOG:0001002") AnnotationAssertion( "galen:ShoulderJoint") AnnotationAssertion(Annotation( "FMA:25912") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "articulatio humeri") AnnotationAssertion(Annotation( "FMA:25912") "humeral joint") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "humeroscapular joint") AnnotationAssertion( "UBERON:0001470") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "glenohumeral joint") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/a/a3/Gray327.png"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (skin of prepuce of penis) AnnotationAssertion(Annotation( "MP:0003553") Annotation( "NCBI:matt") "The loose fold of skin that covers the penis.") AnnotationAssertion( ) AnnotationAssertion( "EV:0100109") AnnotationAssertion( "FMA:27648") AnnotationAssertion( "MA:0001744") AnnotationAssertion( "VHOG:0001342") AnnotationAssertion( "foreskin of penis") AnnotationAssertion( "penis foreskin") AnnotationAssertion( "preputial skin") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001471") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "skin of prepuce of penis") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (vaginal venous plexus) AnnotationAssertion(Annotation( ) "The vaginal plexuses are placed at the sides of the vagina; they communicate with the uterine, vesical, and hemorrhoidal plexuses, and are drained by the vaginal veins, one on either side, into the hypogastric veins. [WP,unvetted].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37801") AnnotationAssertion( "FMA:29713") AnnotationAssertion( "MA:0002257") AnnotationAssertion( "venous vaginal plexus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "plexus venosus vaginalis") AnnotationAssertion( "UBERON:0001472") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "vaginal venous plexus") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/d/d4/Gray589.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lymphatic vessel) AnnotationAssertion(Annotation( ) Annotation( "BTO:0000752") "A vessel that contains or conveys lymph, that originates as an interfibrillar or intercellular cleft or space in a tissue or organ, and that if small has no distinct walls or walls composed only of endothelial cells and if large resembles a vein in structure[BTO].") AnnotationAssertion(Annotation( ) ) AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0005105") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "A network of blunt ended vessels lacking direct connection to the blood vascular system. These vessels collect and drain fluids and macromolecules from interstitial spaces throughout the animal. They derive from a subpopulation of endothelial cells and have walls that are much thinner than the blood carrying vessels. Lymphatic vessels are usually classified as either superficial or deep.[TAO]") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0011005") Annotation( "AAO"^^xsd:string) Annotation( "AAO:EJS"^^xsd:string) "A vessel that contains or conveys lymph.[AAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001249") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0030223693 Liem KF, Bemis WE, Walker WF, Grande L, Functional Anatomy of the Vertebrates: An Evolutionary Perspective (2001) p.627") "Tetrapods have evolved distinct lymphatic systems, in which lymphatic capillaries help drain most of the tissues of the body.[well established][VHOG]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0011005") AnnotationAssertion( "BTO:0000752") AnnotationAssertion( "CALOHA:TS-2102") AnnotationAssertion( "EFO:0000873") AnnotationAssertion( "EMAPA:35532") AnnotationAssertion( "FMA:30315") AnnotationAssertion( "MA:0000138") AnnotationAssertion( "MAT:0000443") AnnotationAssertion( "NCIT:C33038") AnnotationAssertion( "OpenCyc:Mx4rwA1fYZwpEbGdrcN5Y29ycA") AnnotationAssertion( "TAO:0005105") AnnotationAssertion(Annotation( "ncithesaurus:Lymphatic_Vessel") "UMLS:C0229889") AnnotationAssertion( "VHOG:0001249") AnnotationAssertion( "XAO:0000375") AnnotationAssertion( "lymph vessel") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "vas lymphaticum") AnnotationAssertion( "UBERON:0001473") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "lymphatic vessel") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/4/44/Illu_lymph_capillary.jpg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses( ) # Class: (bone element) AnnotationAssertion(Annotation( ) Annotation( ) Annotation( "GO_REF:0000034"^^xsd:string) Annotation( "PSPUB:0000170"^^xsd:string) Annotation( "VSAO:0000057") "Skeletal element that is composed of bone tissue.") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0000047") Annotation( "AAO"^^xsd:string) Annotation( "AAO:LAP"^^xsd:string) "Also called osseous tissue, (Latin: os). Is a type of hard endoskeletal connective tissue found in many vertebrate animals. Bone is the main tissue of body organs that support body structures, protect internal organs, (in conjunction with muscles) facilitate movement; and are involved with cell formation, calcium metabolism, and mineral storage.[AAO]") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0001514") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "Portion of tissue which is calcified connective tissue making up the structural elements of the skeletal system.[TAO]") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "VSAO:0000057") Annotation( "VSAO"^^xsd:string) Annotation( "PSPUB:0000170"^^xsd:string) "Skeletal element that is composed of bone tissue.[VSAO]") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0000047") Annotation( "AAO"^^xsd:string) "relationship loss: subclass specialized connective tissue (AAO:0000571)[AAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001190") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "DOI:10.1159/000324245 Murdock DJ, Donoghue PC, Evolutionary Origins of Animal Skeletal Biomineralization. Cells Tissues Organs (2011)") "The 'new animal phylogeny' reveals that many of the groups known to biomineralize sit among close relatives that do not, and it favours an interpretation of convergent or parallel evolution for biomineralization in animals. (...) Whether this 'biomineralization toolkit'of genes reflects a parallel co-option of a common suite of genes or the inheritance of a skeletogenic gene regulatory network from a biomineralizing common ancestor remains an open debate.[debated][VHOG]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0000047") AnnotationAssertion( "AEO:0000082") AnnotationAssertion( "BTO:0000140") AnnotationAssertion( "CALOHA:TS-0088") AnnotationAssertion( "EFO:0000298") AnnotationAssertion( "EHDAA2:0003082") AnnotationAssertion( "EMAPA:32782") AnnotationAssertion( "ENVO:00002039") AnnotationAssertion( "EV:0100140") AnnotationAssertion( "FMA:30317") AnnotationAssertion( "FMA:5018") AnnotationAssertion( "GAID:92") AnnotationAssertion( "MA:0001459") AnnotationAssertion( "MAT:0000299") AnnotationAssertion( "MIAA:0000299") AnnotationAssertion( "NCIT:C12366") AnnotationAssertion( "OpenCyc:Mx4rvViDlpwpEbGdrcN5Y29ycA") AnnotationAssertion( "OpenCyc:Mx4rvVkCG5wpEbGdrcN5Y29ycA") AnnotationAssertion( "TAO:0001514") AnnotationAssertion(Annotation( "ncithesaurus:Bone") "UMLS:C0262950") AnnotationAssertion( "VHOG:0001190") AnnotationAssertion( "VSAO:0000057") AnnotationAssertion( "XAO:0000169") AnnotationAssertion( "ZFA:0001514") AnnotationAssertion( "galen:Bone") AnnotationAssertion(Annotation( "FMA:5018") "bone organ") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "AEO:0000082") Annotation( "BTO:0000140") Annotation( "MA:0001459") Annotation( "VHOG:0001190") "bone") AnnotationAssertion(Annotation( "ZFA:0001514") Annotation( ) "bones") AnnotationAssertion( "UBERON:0001474") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "bone element") SubClassOf( ) SubClassOf(Annotation( "VSAO-modified") ObjectSomeValuesFrom( )) DisjointClasses( ) DisjointClasses( ) DisjointClasses( ) # Class: (obsolete ligament) AnnotationAssertion( "FMA:30319") AnnotationAssertion( "UBERON:0000211") AnnotationAssertion( "UBERON:0002360") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001475") AnnotationAssertion(rdfs:comment "made obsolete as it incorrectly grouped classes") AnnotationAssertion(rdfs:label "obsolete ligament") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (deltoid) AnnotationAssertion(Annotation( ) Annotation( "FMA:32521") "A muscle of shoulder which attaches to the scapula, clavicle and humerus.[FMA,generalized].") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0010716") Annotation( "AAO"^^xsd:string) Annotation( "AAO:MEJ") "Muscle which originates as three heads, the pars externalis, pars clavicularis, and pars scapularis. The pars externalis originates from the lateral border of the omosternum and inserts on the distal portion of the humerus. The pars clavicularis originates from the ventro-lateral surface of the clavicle and inserts on the deltoid crest of the humerus. The pars scapularis originates from the lateral surface of the clavicle and inserts on the deltoid crest of the humerus.[AAO]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010716") AnnotationAssertion( "EFO:0001412") AnnotationAssertion( "EHDAA2:0000339") AnnotationAssertion( "EMAPA:18177") AnnotationAssertion( "FMA:32521") AnnotationAssertion( "MA:0002286") AnnotationAssertion( "NCIT:C32446") AnnotationAssertion( "OpenCyc:Mx4rvVjdc5wpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Deltoid") "UMLS:C0224234") AnnotationAssertion( "VHOG:0000846") AnnotationAssertion(Annotation( ) "deltoid muscle") AnnotationAssertion(Annotation( "AAO:0010716") "m. deltoideus") AnnotationAssertion(Annotation( ) "musculus deltoideus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "common shoulder muscle") AnnotationAssertion(Annotation( ) "deltoideus") AnnotationAssertion(Annotation( ) "deltoideus muscle") AnnotationAssertion(Annotation( ) Annotation( ) "musculus deltoideus") AnnotationAssertion( "UBERON:0001476") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "We use a generic definition that includes the deltoideus as represented in AAO: 'Muscle which originates as three heads, the pars externalis, pars clavicularis, and pars scapularis. The pars externalis originates from the lateral border of the omosternum and inserts on the distal portion of the humerus. The pars clavicularis originates from the ventro-lateral surface of the clavicle and inserts on the deltoid crest of the humerus. The pars scapularis originates from the lateral surface of the clavicle and inserts on the deltoid crest of the humerus'. Kardong: Dorsal group") AnnotationAssertion(rdfs:label "deltoid") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/9/93/Deltoideus.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "the anterior border and upper surface of the lateral third of the clavicle acromion spine of the scapula") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "the anterior border and upper surface of the lateral third of the clavicle acromion spine of the scapula") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "the anterior border and upper surface of the lateral third of the clavicle acromion spine of the scapula") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "deltoid tuberosity of humerus") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (infraspinatus muscle) AnnotationAssertion(Annotation( ) "The infraspinatus muscle is a thick triangular muscle, which occupies the chief part of the infraspinatous fossa. The infraspinatus is a muscle of the rotator cuff. [WP,unvetted].") AnnotationAssertion(Annotation( "WP"^^xsd:string) "The pectoral muscles - the pectoralis major and pectoralis minor - evolved from a primitive muscle sheet that connected the coracoid to the humerus. In late reptilians and early mammals, this muscle structure was displaced dorsally; while most of its components evolved into the pectoralis major, some fibers eventually attached to the scapula and evolved into the supraspinatus, the infraspinatus, and parts of the subscapularis.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0000826") AnnotationAssertion( "EHDAA:8305") AnnotationAssertion( "EMAPA:18526") AnnotationAssertion( "FMA:32546") AnnotationAssertion( "MA:0002323") AnnotationAssertion( "NCIT:C32797") AnnotationAssertion( "OpenCyc:Mx4rwVT4_ZwpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Infraspinatus") "UMLS:C0584882") AnnotationAssertion( "VHOG:0000921") AnnotationAssertion(Annotation( "MA:0002323") "infraspinatus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "EMAPA:18526") "infrascapularis") AnnotationAssertion(Annotation( ) Annotation( ) "musculus infraspinatus") AnnotationAssertion( "UBERON:0001477") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "infraspinatus muscle") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/9/99/Arm_muscles_back_numbers.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "Wikipedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "infraspinous fossa of the scapula") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "middle facet of greater tubercle of the humerus") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (teres major muscle) AnnotationAssertion(Annotation( ) "Teres major is a muscle of the upper limb and one of six scapulohumeral muscles. It is a thick but somewhat flattened muscle. [WP,unvetted].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0002004") AnnotationAssertion( "EHDAA:8321") AnnotationAssertion( "EMAPA:19110") AnnotationAssertion( "FMA:32549") AnnotationAssertion( "MA:0002392") AnnotationAssertion( "NCIT:C33750") AnnotationAssertion( "OpenCyc:Mx4rwJZqBJwpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Teres_Major_Muscle") "UMLS:C0224232") AnnotationAssertion( "VHOG:0000750") AnnotationAssertion(Annotation( "MA:0002392") "teres major") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "musculus teres major") AnnotationAssertion( "UBERON:0001478") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "teres major muscle") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/9/99/Arm_muscles_back_numbers.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "posterior aspect of the inferior angle of the scapula") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "medial lip of the intertubercular sulcus of the humerus") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (sesamoid bone) AnnotationAssertion(Annotation( ) "A sesamoid element that is composed of bone tissue.") AnnotationAssertion( "sesamoid") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AEO:0000086") AnnotationAssertion( "EHDAA2:0003086") AnnotationAssertion( "EMAPA:36620") AnnotationAssertion( "FMA:32672") AnnotationAssertion( "GAID:210") AnnotationAssertion( "MA:0001375") AnnotationAssertion( "MESH:D012716") AnnotationAssertion( "NCIT:C33541") AnnotationAssertion(Annotation( "ncithesaurus:Sesamoid_Bone") "UMLS:C0036846") AnnotationAssertion( "galen:SessamoidBone") AnnotationAssertion(Annotation( ) Annotation( ) "ossa sesamoidea") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001479") AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "Sesamoids are often endochondral replacement elements and in addition to bone tissue, may also be composed of articular cartilage, fibrocartilage, hyaline cartilage, and calcified cartilage.[VSAO]") AnnotationAssertion(rdfs:label "sesamoid bone") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/b/b3/Gray350.png"^^xsd:anyURI) SubClassOf(Annotation( "UBERON:cjm") ) SubClassOf( ) # Class: (proximal carpal bone) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A carpal bone that proximally_connected_to a forelimb zeugopod skeleton.") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:36164") AnnotationAssertion( "FMA:33302") AnnotationAssertion( "MA:0002557") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001480") AnnotationAssertion(rdfs:label "proximal carpal bone") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (distal carpal bone) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A distal carpal endochondral element that is composed primarily of a bone tissue.") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0000847") Annotation( "AAO"^^xsd:string) Annotation( "AAO:LAP"^^xsd:string) "Series of elements that articulate with the metacarpals.[AAO]") AnnotationAssertion(Annotation( "WP"^^xsd:string) "Primitively, each of the distal bones appears to have articulated with a single metacarpal") AnnotationAssertion( ) AnnotationAssertion( "AAO:0000847") AnnotationAssertion( "EMAPA:36168") AnnotationAssertion( "FMA:33303") AnnotationAssertion( "MA:0002558") AnnotationAssertion(Annotation( "AAO:0000847") "distal carpal") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001481") AnnotationAssertion(rdfs:label "distal carpal bone") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (muscle of shoulder) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "Any muscle organ that is part of a shoulder [Automatically generated definition].") AnnotationAssertion( "EMAPA:36154") AnnotationAssertion( "FMA:33531") AnnotationAssertion( "MA:0000633") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "muscle organ of shoulder") AnnotationAssertion( "shoulder muscle") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "shoulder muscle organ") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001482") AnnotationAssertion(rdfs:label "muscle of shoulder") SubClassOf( ) SubClassOf(Annotation( "prolog"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) SubClassOf( ObjectSomeValuesFrom( )) # Class: (skin of shoulder) AnnotationAssertion(Annotation( ) Annotation( "UBERONREF:0000003"^^xsd:string) "A zone of skin that is part of a shoulder region.") AnnotationAssertion(Annotation( "MA"^^xsd:string) "in MA this is a subclass of forelimb skin, but this violates part-disjointness in Uberon") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:18059") AnnotationAssertion( "FMA:34830") AnnotationAssertion( "MA:0000635") AnnotationAssertion( "shoulder skin") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "shoulder zone of skin") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "zone of skin of shoulder") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001483") AnnotationAssertion(rdfs:label "skin of shoulder") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (articular capsule) AnnotationAssertion(Annotation( ) "An articular capsule (or joint capsule) is an envelope surrounding a synovial joint. [WP,unvetted].") AnnotationAssertion(Annotation( "ncit"^^xsd:string) "check ncita") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37621") AnnotationAssertion( "FMA:34836") AnnotationAssertion( "GAID:263") AnnotationAssertion( "MA:0001519") AnnotationAssertion( "MESH:D017746") AnnotationAssertion( "NCIT:C32259") AnnotationAssertion( "NCIT:C84388") AnnotationAssertion(Annotation( "ncithesaurus:Joint_Capsule") "UMLS:C0206207") AnnotationAssertion( "galen:JointCapsule") AnnotationAssertion(Annotation( "FMA:34836") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "capsula articularis") AnnotationAssertion( "fibrous capsule of joint") AnnotationAssertion( "joint capsule") AnnotationAssertion( "joint fibrous capsule") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "capsulae articulares") AnnotationAssertion( "UBERON:0001484") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "articular capsule") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/1/19/Joint.png"^^xsd:anyURI) AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/4/4a/Gray299.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (knee joint) AnnotationAssertion(Annotation( ) "The knee joint joins the thigh with the leg and consists of two articulations: one between the femur and tibia, and one between the femur and patella. It is the largest and most complicated joint in the human body. The knee is a mobile trocho-ginglymus (i.e. a pivotal hinge joint), which permits flexion and extension as well as a slight medial and lateral rotation[WP,unvetted].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EFO:0001957") AnnotationAssertion( "EMAPA:19137") AnnotationAssertion( "FMA:35175") AnnotationAssertion( "GAID:114") AnnotationAssertion( "MA:0000471") AnnotationAssertion( "MESH:D007719") AnnotationAssertion( "NCIT:C32898") AnnotationAssertion( "OpenCyc:Mx4rwCuaYZwpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Knee_Joint") "UMLS:C0022745") AnnotationAssertion( "VHOG:0001003") AnnotationAssertion( "galen:KneeJoint") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "joint of knee") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "articulatio genus") AnnotationAssertion( "UBERON:0001485") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "knee joint") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/c/ca/Knee.agr.jpg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "definitional"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (hip joint) AnnotationAssertion(Annotation( ) "A synovial joint that connects the femur to the acetbulum of the innominate bone.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0001502") AnnotationAssertion( "EMAPA:19136") AnnotationAssertion( "FMA:35178") AnnotationAssertion( "GAID:262") AnnotationAssertion( "MA:0000470") AnnotationAssertion( "MESH:D006621") AnnotationAssertion( "NCIT:C32742") AnnotationAssertion( "OpenCyc:Mx4rwP32b5wpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Hip_Joint") "UMLS:C0019558") AnnotationAssertion( "VHOG:0001001") AnnotationAssertion( "galen:HipJoint") AnnotationAssertion(Annotation( "FMA:35178") "articulatio coxofemoralis") AnnotationAssertion( "femoro-iliac joint") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "coxal articulation") AnnotationAssertion( "UBERON:0001486") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "hip joint") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "definitional"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (pes joint) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A skeletal joint that is part of a pes [Automatically generated definition].") AnnotationAssertion( "TODO check FMA - use the set class for now") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:32949") AnnotationAssertion( "FMA:35194") AnnotationAssertion( "GAID:256") AnnotationAssertion( "MA:0000464") AnnotationAssertion( "MESH:D033023") AnnotationAssertion(Annotation( "FMA:71349") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "articulationes pedis") AnnotationAssertion( "foot joint") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "hind limb autopod joint") AnnotationAssertion( "joint of pes") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "joint of terminal segment of free lower limb") AnnotationAssertion(Annotation( "FMA:71349") Annotation( ) "joints of foot") AnnotationAssertion( "pedal joint") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001487") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "pes joint") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (ankle joint) AnnotationAssertion(Annotation( ) Annotation( ) Annotation( "MESH:A02.835.583.378.062") "A joint that connects the hindlimb autopod and zeugopod skeletons.") AnnotationAssertion( "todo - accurately represent different types of ankle joint") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0004706") AnnotationAssertion( "EMAPA:35126") AnnotationAssertion( "FMA:35195") AnnotationAssertion( "GAID:257") AnnotationAssertion( "MA:0000463") AnnotationAssertion( "MESH:D000843") AnnotationAssertion( "NCIT:C32078") AnnotationAssertion( "OpenCyc:Mx4rvwiy35wpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Ankle_Joint") "UMLS:C0003087") AnnotationAssertion( "galen:AnkleJoint") AnnotationAssertion(Annotation( ) "gambrel") AnnotationAssertion(Annotation( ) "hock") AnnotationAssertion(Annotation( ) "hock joint") AnnotationAssertion(Annotation( ) "talotibial joint") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0004706") "mortise joint") AnnotationAssertion(Annotation( ) "talocrural articulation") AnnotationAssertion(Annotation( ) "talocrural joint") AnnotationAssertion( "UBERON:0001488") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "ankle joint") AnnotationAssertion( "Ankle:en.svg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (manus joint) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A skeletal joint that is part of a manus (hand) [Automatically generated definition].") AnnotationAssertion( "TODO check FMA - use the set class for now") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:32641") AnnotationAssertion( "MA:0000452") AnnotationAssertion(Annotation( "FMA:71345") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "articulationes manus") AnnotationAssertion( "hand joint") AnnotationAssertion( "joint of hand") AnnotationAssertion( "joint of manus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "joint of terminal segment of free upper limb") AnnotationAssertion( "manual joint") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001489") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "manus joint") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (elbow joint) AnnotationAssertion(Annotation( ) Annotation( ) "A joint that connects the forelimb zeugopod and stylopod skeletons[Obol].") AnnotationAssertion(Annotation( "HP") "In human anatomy, the elbow joint is a compound joint that actually comprises three separate joints: the joints connecting the upper and lower arm: 1) Articulatio humero-ulnaris and 2) Articulatio humero-radialis as well as the proximal joint connecting the forarm bones: 3) Articulatio radio-ulnaris proximalis") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:19102") AnnotationAssertion( "FMA:35289") AnnotationAssertion( "GAID:253") AnnotationAssertion( "MA:0000451") AnnotationAssertion( "MESH:D004551") AnnotationAssertion( "NCIT:C32497") AnnotationAssertion(Annotation( "ncithesaurus:Elbow_Joint") "UMLS:C0013770") AnnotationAssertion( "VHOG:0000997") AnnotationAssertion( "galen:ElbowJoint") AnnotationAssertion(Annotation( ) "articulatio cubiti") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "cubital region joint") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "joint of cubital region") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "joint of elbow") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001490") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "elbow joint") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "definitional"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (wrist joint) AnnotationAssertion(Annotation( ) Annotation( ) Annotation( ) "A joint connecting the forelimb zeugopod skeleton with the carpal skeleton.") AnnotationAssertion(Annotation( "FMA"^^xsd:string) "in FMA this includes radio-carpal and radio-ulnar *ligaments*") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:19205") AnnotationAssertion( "FMA:321842") AnnotationAssertion( "GAID:274") AnnotationAssertion( "MA:0000460") AnnotationAssertion( "MESH:A02.835.583.959") AnnotationAssertion( "NCIT:C33894") AnnotationAssertion( "OpenCyc:Mx4rvZD2PJwpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Wrist_Joint") "UMLS:C1322271") AnnotationAssertion( "galen:WristJoint") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "carpal region joint") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "joint of carpal region") AnnotationAssertion( "joint of wrist") AnnotationAssertion(Annotation( "FMA:35291") Annotation( ) "radiocarpal joint") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001491") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "wrist joint") AnnotationAssertion( "Human:wrist.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (radial nerve) AnnotationAssertion(Annotation( ) "A nerve that supplies the upper limb, including the triceps brachii muscle of the arm, as well as all 12 muscles in the posterior osteofascial compartment of the forearm, as well as the associated joints and overlying skin.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0001584") AnnotationAssertion( "EHDAA:5650") AnnotationAssertion( "EMAPA:17278") AnnotationAssertion( "FMA:37069") AnnotationAssertion( "GAID:845") AnnotationAssertion( "MA:0001171") AnnotationAssertion( "MESH:D011826") AnnotationAssertion( "NCIT:C52812") AnnotationAssertion( "OpenCyc:Mx4rvfk7E5wpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Radial_Nerve") "UMLS:C0034518") AnnotationAssertion( "VHOG:0000896") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "nervus radialis") AnnotationAssertion( "UBERON:0001492") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "radial nerve") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/e/e2/Gray818.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (axillary nerve) AnnotationAssertion(Annotation( ) "The axillary nerve is a nerve of the human body, that comes off the posterior cord of the brachial plexus at the level of the axilla (armpit) and carries nerve fibers from C5 and C6. The axillary nerve travels through the quadrangular space with the posterior circumflex humeral artery and vein. [WP,unvetted].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:18802") AnnotationAssertion( "FMA:37072") AnnotationAssertion( "MA:0001166") AnnotationAssertion( "NCIT:C52817") AnnotationAssertion( "OpenCyc:Mx4rvgwMfpwpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Axillary_Nerve") "UMLS:C0228885") AnnotationAssertion( "circumflex humeral nerve") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "auxillery nerve") AnnotationAssertion(Annotation( ) "circumflex nerve") AnnotationAssertion(Annotation( ) "nervus axillaris") AnnotationAssertion(Annotation( ) Annotation( ) "nervus axillaris") AnnotationAssertion( "UBERON:0001493") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "axillary nerve") AnnotationAssertion( "Brachial:plexus.jpg"^^xsd:anyURI) AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/e/ea/Brachial_plexus_2.svg"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "MA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (ulnar nerve) AnnotationAssertion(Annotation( ) "A nerve which runs near the ulna bone.") AnnotationAssertion( "UBERON:0005668") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0002099") AnnotationAssertion( "EHDAA:5652") AnnotationAssertion( "EMAPA:17279") AnnotationAssertion( "FMA:37319") AnnotationAssertion( "GAID:846") AnnotationAssertion( "MA:0001174") AnnotationAssertion( "MESH:D014459") AnnotationAssertion( "NCIT:C52807") AnnotationAssertion(Annotation( "ncithesaurus:Ulnar_Nerve") "UMLS:C0041602") AnnotationAssertion( "VHOG:0000922") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "nervus ulnaris") AnnotationAssertion( "UBERON:0001494") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "ulnar nerve") AnnotationAssertion( "Brachial:plexus.jpg"^^xsd:anyURI) AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/e/ea/Brachial_plexus_2.svg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pectoral muscle) AnnotationAssertion(Annotation( "ncithesaurus:Pectoralis_Muscle") "Muscles of the upper chest. The term may refer to one of two muscles, the pectoralis major and pectoralis minor. The former is a thick muscle in the anterior portion of the chest. Its action involves flexion, medial rotation, and adduction of the humerus. The latter is a thin muscle located beneath the pectoralis major. Its action involves lowering the scapula and raising the ribs.") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0010727") Annotation( "AAO"^^xsd:string) Annotation( "AAO:MEJ") "Muscle which is comprised of three heads. The anterior head is the portio epicoracoidea that originates on the epicoracoid cartilage and inserts on the deltoid crest of the humerus. The next more posterior head, portio sternalis, originates on the sternum and inserts in the groove next to the deltoid crest of the humerus. The most posterior head, portio abdominalis, arises from the M. rectus abdominis and inserts on the deltoid crest of the humerus.[AAO]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010727") AnnotationAssertion( "BTO:0000023") AnnotationAssertion( "CALOHA:TS-0751") AnnotationAssertion( "EMAPA:35670") AnnotationAssertion( "FMA:37349") AnnotationAssertion( "GAID:153") AnnotationAssertion( "MA:0002423") AnnotationAssertion( "MESH:D010369") AnnotationAssertion( "NCIT:C33286") AnnotationAssertion(Annotation( "ncithesaurus:Pectoralis_Muscle") "UMLS:C0030747") AnnotationAssertion(Annotation( "AAO:0010727") "M. pectoralis") AnnotationAssertion(Annotation( "FMA:37349") "muscle of pectoral part of chest") AnnotationAssertion(Annotation( "FMA:37349") "muscle of pectoral region") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0000023") "breast muscle") AnnotationAssertion( "pectoralis") AnnotationAssertion( "pectoralis group muscle") AnnotationAssertion(Annotation( "BTO:0000023") "pectoralis muscle") AnnotationAssertion( "UBERON:0001495") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "This currently groups the major and minor muscles (which have different attachment sites) as well as the AAO structure: Muscle which is comprised of three heads. The anterior head is the portio epicoracoidea that originates on the epicoracoid cartilage and inserts on the deltoid crest of the humerus. The next more posterior head, portio sternalis, originates on the sternum and inserts in the groove next to the deltoid crest of the humerus. The most posterior head, portio abdominalis, arises from the M. rectus abdominis and inserts on the deltoid crest of the humerus") AnnotationAssertion(rdfs:label "pectoral muscle") AnnotationAssertion( "Pectoralis:major.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (ascending aorta) AnnotationAssertion(Annotation( ) Annotation( "GO:0035905") "The ascending aorta is the portion of the aorta in a two-pass circulatory system that lies between the heart and the arch of aorta[GO]. A portion of the aorta commencing at the upper part of the base of the left ventricle, on a level with the lower border of the third costal cartilage behind the left half of the sternum; it passes obliquely upward, forward, and to the right, in the direction of the heart's axis, as high as the upper border of the second right costal cartilage, describing a slight curve in its course, and being situated, about 6 cm behind the posterior surface of the sternum. The total length is about 5 cm in length [Wikipedia].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0000147") AnnotationAssertion( "EHDAA:9828") AnnotationAssertion( "EMAPA:17014") AnnotationAssertion( "FMA:3736") AnnotationAssertion( "MA:0002570") AnnotationAssertion( "NCIT:C32150") AnnotationAssertion( "OpenCyc:Mx4rwVFqO5wpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Ascending_Aorta") "UMLS:C0003956") AnnotationAssertion(Annotation( "EMAPA:17014") "ascending thoracic aorta") AnnotationAssertion( "pars ascendens aortae") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "aorta ascendens") AnnotationAssertion(Annotation( ) Annotation( ) "pars ascendens aortae") AnnotationAssertion( "UBERON:0001496") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "ascending aorta") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/e/e6/Gray506.svg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (muscle of pelvic girdle) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "Any muscle organ that is part of a pelvic girdle [Automatically generated definition].") AnnotationAssertion(Annotation( "MA"^^xsd:string) "Note that in MA, this is a subclass of pelvis muscle; in FMA this is a hindlimb muscle, but recall in FMA hindlimb includes the girdle.") AnnotationAssertion( "UBERON:0003271") AnnotationAssertion( "EHDAA:8326") AnnotationAssertion( "EMAPA:18184") AnnotationAssertion( "EMAPA:18185") AnnotationAssertion( "FMA:37367") AnnotationAssertion( "MA:0000537") AnnotationAssertion( "RETIRED_EHDAA2:0001430") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "girdle-pelvic muscle organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "muscle organ of girdle-pelvic") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "muscle organ of pelvic girdle") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "muscle organ of pelvic girdle bone") AnnotationAssertion( "pelvic girdle muscle") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "pelvic girdle muscle organ") AnnotationAssertion(Annotation( "EMAPA:18185") "pelvic girdle skeletal muscle") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001497") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "muscle of pelvic girdle") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (muscle of pes) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "Any muscle organ that is part of a pes [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( "BTO:0000477") AnnotationAssertion( "EMAPA:36160") AnnotationAssertion( "FMA:37369") AnnotationAssertion( "MA:0000652") AnnotationAssertion( "foot muscle") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "foot muscle organ") AnnotationAssertion(Annotation( "FMA:37369") "muscle of foot") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "muscle organ of foot") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001498") AnnotationAssertion(rdfs:label "muscle of pes") SubClassOf( ) SubClassOf(Annotation( "prolog"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (muscle of arm) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A muscle organ that is part of an arm [Automatically generated definition].") AnnotationAssertion( "See notes on UBERON:0001460 for possible terminological confusion over term 'arm'. MA uses this consistent with uberon (forelimb muscle is subdivided into shoulder, arm and hand)") AnnotationAssertion( "UBERON:0003272") AnnotationAssertion( "EHDAA:8277") AnnotationAssertion( "EMAPA:36053") AnnotationAssertion( "MA:0000594") AnnotationAssertion( "RETIRED_EHDAA2:0000142") AnnotationAssertion(Annotation( "MA:0000594") "arm muscle") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "arm skeletal muscle") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "arm skeletal muscle tissue") AnnotationAssertion(Annotation( ) "muscle of upper arm or lower arm") AnnotationAssertion(Annotation( ) "upper arm / lower arm muscle") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "EHDAA2:0000141") "arm muscle system") AnnotationAssertion( "UBERON:0001499") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "muscle of arm") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (muscle of manus) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "Any muscle organ that is part of a manus [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:32644") AnnotationAssertion( "FMA:37372") AnnotationAssertion( "MA:0000628") AnnotationAssertion(Annotation( "MA:0000628") "hand muscle") AnnotationAssertion( "manus muscle") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "manus muscle organ") AnnotationAssertion(Annotation( "FMA:37372") "muscle of hand") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "muscle organ of manus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001500") AnnotationAssertion(rdfs:label "muscle of manus") SubClassOf( ) SubClassOf(Annotation( "prolog"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (lumbrical muscle of manus) AnnotationAssertion(Annotation( ) "The lumbricals are intrinsic muscles of the manus that flex the metacarpophalangeal joints and extend the interphalangeal joints.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:36217") AnnotationAssertion( "FMA:37385") AnnotationAssertion( "MA:0002316") AnnotationAssertion( "hand lumbrical") AnnotationAssertion(Annotation( "MA:0002316") "hand lumbrical muscle") AnnotationAssertion(Annotation( "FMA:37385") "lumbrical of hand") AnnotationAssertion(Annotation( ) Annotation( ) "musculi lumbricales manus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:37385") "lumbrical muscle of hand") AnnotationAssertion( "UBERON:0001501") AnnotationAssertion(rdfs:label "lumbrical muscle of manus") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (interosseous muscle of manus) AnnotationAssertion(Annotation( ) "Any of the interosseous muscles of the manus (hand). This includes the dorsal and plantar interossei.") AnnotationAssertion(Annotation( "MURDOCH:1022") "The interosseous muscles are flexor muscles of the manus that help support and flex the metacarpophalangeal joints. In some species the muscles are known as the suspensory ligaments. The muscles are found under the deep digital flexor tendon and originate from the base of each metacarpal bone. From its origin each muscle runs a short way down until it divides into two tendons that continue down and insert onto the base of its corresponding proximal phalanx. Each tendon has a sesamoid imbedded within it, that lie over the metacarpophalangeal joint. A small tendon, sometimes known as an extensor branch, continues to proceed from the base of each proximal phalanx and connects to the common extensor tendon. It has a small role to play in the extension of each phalanx. The main innervation of this muscle is via a branch of the ulnaris nerve[MURDOCH:1022].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:36216") AnnotationAssertion( "FMA:37417") AnnotationAssertion( "MA:0002313") AnnotationAssertion( "NCIT:C53173") AnnotationAssertion(Annotation( "ncithesaurus:Hand_Interosseous_Muscle") "UMLS:C0224295") AnnotationAssertion(Annotation( "MA:0002313") "hand interosseous muscle") AnnotationAssertion(Annotation( "FMA:37417") "interosseous muscle of hand") AnnotationAssertion( "manus interosseous muscle") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001502") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "interosseous muscle of manus") SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (dorsal interosseous of manus) AnnotationAssertion(Annotation( ) "The dorsal interossei of the hand are muscles that occupy the space between the metacarpals. There are four dorsal interossei in each hand. They are specified as 'dorsal' to contrast them with the palmar interossei, which are located on the anterior side of the metacarpals. The dorsal interosseous muscles are bipennate, with each muscle arising by two heads from the adjacent sides of the metacarpal bones, but more extensively from the metacarpal bone of the finger into which the muscle is inserted. They are inserted into the bases of the proximal phalanges and into the extensor expansion of the corresponding extensor digitorum tendon. The middle digit has two dorsal interossei insert onto it while the first digit (thumb) and the fifth digit (little finger) have none[WP].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37519") AnnotationAssertion( "FMA:37418") AnnotationAssertion( "MA:0002314") AnnotationAssertion( "NCIT:C52703") AnnotationAssertion(Annotation( "ncithesaurus:Dorsal_Hand_Interosseous_Muscle") "UMLS:C1744530") AnnotationAssertion(Annotation( "MA:0002314") "dorsal hand interosseus muscle") AnnotationAssertion(Annotation( "FMA:37418") "dorsal interosseous of hand") AnnotationAssertion( "dorsal manus interosseous muscle") AnnotationAssertion( "musculi interossei dorsales manus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:37418") "dorsal interosseous muscle of hand") AnnotationAssertion( "UBERON:0001503") AnnotationAssertion(rdfs:comment "Action: abducts medial digits") AnnotationAssertion(rdfs:label "dorsal interosseous of manus") SubClassOf( ) SubClassOf(Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (lumbrical muscle of pes) AnnotationAssertion(Annotation( ) "The lumbricals are four small skeletal muscles, accessory to the tendons of the flexor digitorum longus and numbered from the medial side of the pes; they arise from these tendons, as far back as their angles of division, each springing from two tendons, except the first.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:36263") AnnotationAssertion( "FMA:37453") AnnotationAssertion( "MA:0002305") AnnotationAssertion(Annotation( "FMA:37453") "foot lumbrical") AnnotationAssertion(Annotation( "MA:0002305") "foot lumbrical muscle") AnnotationAssertion(Annotation( "FMA:37453") "lumbrical of foot") AnnotationAssertion( "pes lumbrical") AnnotationAssertion( "pes lumbrical muscle") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:37453") "lumbrical muscle of foot") AnnotationAssertion( "UBERON:0001504") AnnotationAssertion(rdfs:label "lumbrical muscle of pes") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (coracobrachialis muscle) AnnotationAssertion(Annotation( ) "The Coracobrachialis is the smallest of the three muscles that attach to the coracoid process of the scapula. (The other two muscles are pectoralis minor and biceps brachii. ) It is situated at the upper and medial part of the arm. It is perforated by and innervated by the musculocutaneous nerve. [WP,unvetted].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:36182") AnnotationAssertion( "FMA:37664") AnnotationAssertion( "MA:0002282") AnnotationAssertion( "NCIT:C53151") AnnotationAssertion(Annotation( "ncithesaurus:Coracobrachialis") "UMLS:C0224246") AnnotationAssertion(Annotation( "FMA:37664") "Pirogoff's aponeurosis") AnnotationAssertion(Annotation( "MA:0002282") "coracobrachial") AnnotationAssertion( "coracobrachialis") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "coracobrachialis muscle") AnnotationAssertion(Annotation( ) Annotation( ) "musculus coracobrachialis") AnnotationAssertion( "UBERON:0001505") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "coracobrachialis muscle") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/8/8c/Coracobrachialis.png"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf(Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "coracoid process of scapula") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "medial humerus") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (brachialis muscle) AnnotationAssertion(Annotation( ) "The brachialis (brachialis anticus) is a muscle in the upper arm that flexes the elbow joint. It lies just deep of the biceps brachii, and is a synergist that assists the biceps brachii in flexing at the elbow. It makes up part of the floor of the region known as the cubital fossa. [WP,unvetted].") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001026") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( ) "A muscle of the stylopodium, covering the distal half of the humerus and the anterior part of the elbow joint. It functions to flex the zeugopodium. [TFD][VHOG]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0000181") AnnotationAssertion( "EHDAA:8281") AnnotationAssertion( "EMAPA:19109") AnnotationAssertion( "FMA:37667") AnnotationAssertion( "MA:0002271") AnnotationAssertion( "NCIT:C53149") AnnotationAssertion(Annotation( "ncithesaurus:Brachialis") "UMLS:C0224240") AnnotationAssertion( "VHOG:0001026") AnnotationAssertion( "Casserio's muscle") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "brachialis") AnnotationAssertion(Annotation( ) "brachialis anticus muscle") AnnotationAssertion(Annotation( ) Annotation( ) "musculus brachialis") AnnotationAssertion( "UBERON:0001506") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "brachialis muscle") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/8/87/Brachialis.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "anterior surface of the humerus particularly the distal half of this bone") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "coronoid process and the tuberosity of the ulna") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (biceps brachii) AnnotationAssertion(Annotation( ) "A muscle in the forelimb stylopod which in humans has several functions, the most important being to rotate the forearm and to flex the elbow. [WP,unvetted].") AnnotationAssertion(Annotation( "EHDAA2:0000167") "biceps") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0003419") AnnotationAssertion( "EHDAA2:0000167") AnnotationAssertion( "EHDAA:8279") AnnotationAssertion( "EMAPA:19108") AnnotationAssertion( "FMA:37670") AnnotationAssertion( "MA:0002269") AnnotationAssertion( "NCIT:C32200") AnnotationAssertion(Annotation( "ncithesaurus:Biceps") "UMLS:C0559499") AnnotationAssertion( "VHOG:0000861") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "biceps brachii %26 brachialis muscles") AnnotationAssertion(Annotation( ) "biceps brachii muscle") AnnotationAssertion(Annotation( ) "biceps cubiti") AnnotationAssertion(Annotation( ) "biceps muscle") AnnotationAssertion(Annotation( ) Annotation( ) "musculus biceps brachii") AnnotationAssertion( "UBERON:0001507") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "biceps brachii") AnnotationAssertion( "https://upload.wikimedia.org/wikipedia/commons/5/5d/Biceps_brachii_muscle06.png"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "Musculocutaneous nerve") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "short head: coracoid process of the scapula. long head: supraglenoid tubercle") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "short head: coracoid process of the scapula. long head: supraglenoid tubercle") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "radial tuberosity and bicipittal aponeurosis into deep fascia on medial part of forearm") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (arch of aorta) AnnotationAssertion(Annotation( "ISBN:0-683-40008-8"^^xsd:string) Annotation( "MP:0004113") "The convex portion of the aorta between the ascending and descending parts of the aorta; branches from it include the brachiocephalic trunk, the left common carotid artery, and the left subclavian artery; the brachiocephalic trunk further splits to form the right subclavian artery and the right common carotid artery.") AnnotationAssertion( "Do not confuse with aortic arch") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001196") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( ) "The curving portion between the ascending aorta and the descending aorta, giving rise to the brachiocephalic trunk, the left common carotid artery, and the left subclavian artery. [TFD][VHOG]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001196") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0072528305 Kardong KV, Vertebrates: Comparative Anatomy, Function, Evolution (2006) p.460 and p.461 Figure 12.20") "The double systemic arch arches (left and right) present in amphibians and reptiles become reduced to a single systemic arch - the right in birds, the left in mammals.[well established][VHOG]") AnnotationAssertion( "birds have right aortic arch, mammals left.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0000157") AnnotationAssertion( "EFO:0002526") AnnotationAssertion( "EHDAA2:0000132") AnnotationAssertion( "EMAPA:17613") AnnotationAssertion( "FMA:3768") AnnotationAssertion( "GAID:471") AnnotationAssertion( "MA:0000475") AnnotationAssertion( "VHOG:0001196") AnnotationAssertion(Annotation( "FMA:3768") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "arcus aortae") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:3768") "aortic arch") AnnotationAssertion(Annotation( "GAID:471") "thoracic aorta") AnnotationAssertion( "UBERON:0001508") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "arch of aorta") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/e/e6/Gray506.svg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "left arch 4 in human") Annotation( "embryology.ch") ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (triceps brachii) AnnotationAssertion(Annotation( ) "The triceps brachii muscle (Latin for 'three-headed' muscle of the arm, it is called a three headed muscle because there are three bundles of muscle, each of different origin, joining together at the elbow) is the large muscle on the back of the human upper limb. It is the muscle principally responsible for extension of the elbow joint (i.e. straightening of the arm). Though a similarly-named muscle, the triceps surae, is found on the lower leg, the triceps brachii is commonly called simply the 'triceps'. [WP,unvetted].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0002080") AnnotationAssertion( "EHDAA:8287") AnnotationAssertion( "EMAPA:19111") AnnotationAssertion( "FMA:37688") AnnotationAssertion( "MA:0002399") AnnotationAssertion( "NCIT:C33812") AnnotationAssertion( "NCIT:C90604") AnnotationAssertion(Annotation( "ncithesaurus:Triceps_Brachii") "UMLS:C0559502") AnnotationAssertion( "VHOG:0000851") AnnotationAssertion(Annotation( "EHDAA2:0002080") "triceps") AnnotationAssertion(Annotation( ) "triceps brachii muscle") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "musculus triceps brachii") AnnotationAssertion(Annotation( ) "triceps muscle") AnnotationAssertion( "UBERON:0001509") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "Dorsal group derivative that acts on the forearm[Kardong]") AnnotationAssertion(rdfs:label "triceps brachii") AnnotationAssertion( "Triceps:brachii.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "radial nerve and axillary nerve") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "radial nerve and axillary nerve") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "lateral head: posterior humerus") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "long head: infraglenoid tubercle of scapula") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "olecranon process of ulna") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (skin of knee) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A zone of skin that is part of a knee [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:18151") AnnotationAssertion( "FMA:37800") AnnotationAssertion( "MA:0000668") AnnotationAssertion( "NCIT:C64859") AnnotationAssertion(Annotation( "ncithesaurus:Knee_Skin") "UMLS:C0222275") AnnotationAssertion( "knee skin") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "knee zone of skin") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "zone of skin of knee") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001510") AnnotationAssertion(rdfs:label "skin of knee") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (skin of leg) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A zone of skin that is part of a leg [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:18156") AnnotationAssertion( "EMAPA:18159") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37352") AnnotationAssertion( "FMA:37828") AnnotationAssertion( "MA:0000674") AnnotationAssertion( "NCIT:C52749") AnnotationAssertion(Annotation( "ncithesaurus:Leg_Skin") "UMLS:C0222279") AnnotationAssertion( "leg skin") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "leg zone of skin") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "zone of skin of leg") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001511") AnnotationAssertion(rdfs:label "skin of leg") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (skin of ankle) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A zone of skin that is part of an ankle [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37353") AnnotationAssertion( "FMA:37831") AnnotationAssertion( "MA:0000641") AnnotationAssertion( "NCIT:C52751") AnnotationAssertion(Annotation( "ncithesaurus:Ankle_Skin") "UMLS:C0222286") AnnotationAssertion( "ankle skin") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "ankle zone of skin") AnnotationAssertion(Annotation( ) "tarsal region skin") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "zone of skin of ankle") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001512") AnnotationAssertion(rdfs:label "skin of ankle") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (skin of pes) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A zone of skin that is part of a pes [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:18504") AnnotationAssertion( "FMA:37834") AnnotationAssertion( "MA:0000654") AnnotationAssertion( "NCIT:C52750") AnnotationAssertion(Annotation( "ncithesaurus:Foot_Skin") "UMLS:C0222289") AnnotationAssertion( "foot skin") AnnotationAssertion(Annotation( "FMA:37834") "skin of foot") AnnotationAssertion(Annotation( "EMAPA:18504") Annotation( ) "skin of hind-paw") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001513") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "skin of pes") SubClassOf(Annotation( "MA"^^xsd:string) ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (descending aorta) AnnotationAssertion(Annotation( ) Annotation( "GO:0035906") "The descending aorta is the portion of the aorta in a two-pass circulatory system from the arch of aorta to the point where it divides into the common iliac arteries[GO]. The descending aorta is part of the aorta, the largest artery in the body. The descending aorta is the part of the aorta beginning at the aortic arch that runs down through the chest and abdomen. The descending aorta is divided into two portions, the thoracic and abdominal, in correspondence with the two great cavities of the trunk in which it is situated. Within the abdomen, the descending aorta branches into the two common iliac arteries which serve the legs. [WP,unvetted].") AnnotationAssertion( "results from fusion of left and right dorsal aortae") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:18606") AnnotationAssertion( "FMA:3784") AnnotationAssertion( "MA:0002571") AnnotationAssertion( "NCIT:C32455") AnnotationAssertion( "OpenCyc:Mx4rv4EE35wpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Descending_Aorta") "UMLS:C0011666") AnnotationAssertion(Annotation( "FMA:3784") "pars descendens aortae") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "aorta descendens") AnnotationAssertion(Annotation( ) Annotation( ) "aorta descendens") AnnotationAssertion(Annotation( ) Annotation( ) "pars descendens aortae") AnnotationAssertion( "UBERON:0001514") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "descending aorta") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/e/e6/Gray506.svg"^^xsd:anyURI) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf(Annotation( "Wikipedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (thoracic aorta) AnnotationAssertion(Annotation( ) Annotation( "MP:0010468") "The part of the aorta that extends from the origin at the heart to the diaphragm, and from which arises numerous branches that supply oxygenated blood to the chest cage and the organs within the chest.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0000157") AnnotationAssertion( "EFO:0002525") AnnotationAssertion( "EMAPA:18603") AnnotationAssertion( "FMA:3786") AnnotationAssertion( "GAID:471") AnnotationAssertion( "MA:0002569") AnnotationAssertion( "MESH:D001013") AnnotationAssertion( "NCIT:C33766") AnnotationAssertion( "OpenCyc:Mx4rveb9TpwpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Thoracic_Aorta") "UMLS:C1522460") AnnotationAssertion( "galen:ThoracicAorta") AnnotationAssertion(Annotation( "FMA:3786") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "aorta thoracica") AnnotationAssertion( "thoracic part of aorta") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "aorta thoracalis") AnnotationAssertion(Annotation( ) Annotation( ) "pars thoracica aortae") AnnotationAssertion( "UBERON:0001515") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "thoracic aorta") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/7/75/Gray530.png"^^xsd:anyURI) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (abdominal aorta) AnnotationAssertion(Annotation( ) Annotation( "BTO:0002976") "Abdominal part of aorta: the distal part of the descending aorta, which is the continuation of the thoracic part and gives rise to the inferior phrenic, lumbar, median sacral, superior and inferior mesenteric, middle suprarenal, renal, and testicular or ovarian arteries, and celiac trunk[BTO]. The abdominal aorta is the largest artery in the abdominal cavity. As part of the aorta, it is a direct continuation of descending aorta(of the thorax). [WP,unvetted].") AnnotationAssertion( "Many of the branches of the abdominal aorta in mammals may be branches of the dorsal aorta in other vertebrates") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0002976") AnnotationAssertion( "EFO:0002524") AnnotationAssertion( "EMAPA:17856") AnnotationAssertion( "FMA:3789") AnnotationAssertion( "GAID:470") AnnotationAssertion( "MA:0000474") AnnotationAssertion( "MESH:D001012") AnnotationAssertion( "NCIT:C32038") AnnotationAssertion( "OpenCyc:Mx4rvYhWCZwpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Abdominal_Aorta") "UMLS:C0003484") AnnotationAssertion( "galen:AbdominalAorta") AnnotationAssertion(Annotation( "FMA:3789") "abdominal part of aorta") AnnotationAssertion(Annotation( "FMA:3789") "descending abdominal aorta") AnnotationAssertion(Annotation( "FMA:3789") "pars abdominalis aortae") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0002976") "abdominal part of aorta") AnnotationAssertion(Annotation( ) Annotation( ) "aorta abdominalis") AnnotationAssertion(Annotation( "BTO:0002976") "aorta abdominalis") AnnotationAssertion(Annotation( ) Annotation( ) "pars abdominalis aortae") AnnotationAssertion(Annotation( "BTO:0002976") "pars abdominalis aortae") AnnotationAssertion( "UBERON:0001516") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "abdominal aorta") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/a/af/Gray531.png"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) SubClassOf( ObjectSomeValuesFrom( )) # Class: (skin of elbow) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A zone of skin that is part of a elbow [Automatically generated definition].") AnnotationAssertion( "UBERON:0003399") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:18051") AnnotationAssertion( "FMA:38250") AnnotationAssertion( "MA:0000610") AnnotationAssertion( "NCIT:C52755") AnnotationAssertion(Annotation( "ncithesaurus:Elbow_Skin") "UMLS:C0222213") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "cubital region zone of skin") AnnotationAssertion( "elbow skin") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "elbow zone of skin") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "zone of skin of cubital region") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "zone of skin of elbow") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001517") AnnotationAssertion(rdfs:label "skin of elbow") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (skin of wrist) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A zone of skin that is part of a wrist [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37351") AnnotationAssertion( "FMA:38280") AnnotationAssertion( "MA:0000638") AnnotationAssertion( "NCIT:C52752") AnnotationAssertion(Annotation( "ncithesaurus:Wrist_Skin") "UMLS:C0222223") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "carpal region zone of skin") AnnotationAssertion( "wrist skin") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "wrist zone of skin") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "zone of skin of carpal region") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "zone of skin of wrist") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001518") AnnotationAssertion(rdfs:label "skin of wrist") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (skin of manus) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A zone of skin that is part of a manus [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:18486") AnnotationAssertion( "FMA:38295") AnnotationAssertion( "MA:0000630") AnnotationAssertion( "NCIT:C52753") AnnotationAssertion(Annotation( "ncithesaurus:Hand_Skin") "UMLS:C0222224") AnnotationAssertion(Annotation( "MA:0000630") "hand skin") AnnotationAssertion( "manus skin") AnnotationAssertion(Annotation( "FMA:38295") "skin of hand") AnnotationAssertion(Annotation( "EMAPA:18486") Annotation( ) "skin of fore-paw") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001519") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "skin of manus") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pronator teres) AnnotationAssertion(Annotation( ) "The pronator teres is a muscle of the human body (located mainly in the forearm) that, along with the pronator quadratus, serves to pronate the forearm (turning it so the palm faces posteriorly). [WP,unvetted].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:36207") AnnotationAssertion( "FMA:38450") AnnotationAssertion( "MA:0002357") AnnotationAssertion( "NCIT:C53174") AnnotationAssertion(Annotation( "ncithesaurus:Pronator_Teres") "UMLS:C0224249") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "musculus pronator teres") AnnotationAssertion(Annotation( ) "pronator teres muscle") AnnotationAssertion( "UBERON:0001520") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "pronator teres") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/8/87/Pronator-teres.png"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "humeral head: medial epicondyle of humerus ulnar head: coronoid process of ulna") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "humeral head: medial epicondyle of humerus ulnar head: coronoid process of ulna") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "Middle of the lateral surface of the body of the radius") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (flexor carpi radialis muscle) AnnotationAssertion(Annotation( ) "A muscle of the forearm that acts to flex and abduct the manus. [WP,unvetted].") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0010733") Annotation( "AAO"^^xsd:string) Annotation( "AAO:MEJ") "Muscle which originates on the inner border of the humerus and inserts on the carpus.[AAO]") AnnotationAssertion(Annotation( "AAO"^^xsd:string) "we group the AAO class here, despite the different insertion site - requires vetting: Muscle which originates on the inner border of the humerus and inserts on the carpus. [AAO:0010733]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010733") AnnotationAssertion( "EMAPA:36197") AnnotationAssertion( "FMA:38459") AnnotationAssertion( "MA:0002297") AnnotationAssertion( "NCIT:C53155") AnnotationAssertion(Annotation( "ncithesaurus:Flexor_Carpi_Radialis") "UMLS:C0224252") AnnotationAssertion(Annotation( "MA:0002297") "flexor carpi radialis") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001521") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "flexor carpi radialis muscle") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/5/59/Flexor-carpi-radialis.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "2 and 3 in human") ObjectSomeValuesFrom( )) # Class: (flexor carpi ulnaris muscle) AnnotationAssertion(Annotation( ) "The flexor carpi ulnaris muscle (FCU) is a muscle of the human forearm that acts to flex and adduct the manus. [WP,unvetted].") AnnotationAssertion(Annotation( "AAO"^^xsd:string) "AAO has a class with the same name, the exact insertion point is unclear; consider grouping :Muscle which originates from the medial condyle of the humerus and inserts on the carpus. [AAO:0010734]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:36198") AnnotationAssertion( "FMA:38465") AnnotationAssertion( "MA:0002298") AnnotationAssertion( "NCIT:C53156") AnnotationAssertion(Annotation( "ncithesaurus:Flexor_Carpi_Ulnaris") "UMLS:C0224254") AnnotationAssertion(Annotation( ) "flexor carpi ulnaris") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "musculus flexor carpi ulnaris") AnnotationAssertion( "UBERON:0001522") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "flexor carpi ulnaris muscle") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/c/c1/FCU.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "medial epicondyle") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (flexor digitorum profundus) AnnotationAssertion(Annotation( ) "A muscle in the forearm that flexes the manual digits[WP,modified].") AnnotationAssertion(Annotation( "EMAPA"^^xsd:string) "in EMAPA, this is part of the leg, which is presumably a mistake") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0001246") AnnotationAssertion( "EMAPA:19319") AnnotationAssertion( "FMA:38478") AnnotationAssertion( "MA:0002300") AnnotationAssertion( "NCIT:C52923") AnnotationAssertion(Annotation( "ncithesaurus:Flexor_Digitorum_Profundus") "UMLS:C0224261") AnnotationAssertion(Annotation( ) "flexor digitorum profundus muscle") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "musculus flexor digitorum profundus") AnnotationAssertion( "UBERON:0001523") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "flexor digitorum profundus") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/2/24/Flexor-digitorum-profundis.png"^^xsd:anyURI) SubClassOf(Annotation( "BTO"^^xsd:string) ) SubClassOf( ) SubClassOf(Annotation( "upper 3/4 of the volar and medial surfaces of the body of the ulna interosseous membrane and deep fascia of the forearm") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "base of the distal phalanges of the fingers") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (extensor carpi radialis longus muscle) AnnotationAssertion(Annotation( ) "Extensor carpi radialis longus is one of the five main muscles that control movements at the wrist. This muscle is quite long, starting on the lateral side of the humerus, and attaching to the base of the second metacarpal bone (metacarpal of the index finger). [WP,unvetted].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:36189") AnnotationAssertion( "FMA:38494") AnnotationAssertion( "MA:0002291") AnnotationAssertion( "NCIT:C52913") AnnotationAssertion(Annotation( "ncithesaurus:Extensor_Carpi_Radialis_Longus") "UMLS:C0224266") AnnotationAssertion(Annotation( "MA:0002291") "extensor carpi radialis longus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "musculus extensor carpi radialis longus") AnnotationAssertion( "UBERON:0001524") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "extensor carpi radialis longus muscle") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/7/75/ECR-longus.png"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "lateral supracondylar ridge") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "base") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (extensor carpi radialis brevis muscle) AnnotationAssertion(Annotation( ) "The Extensor carpi radialis brevis is shorter and thicker than the extensor carpi radialis longus. The longus muscle can be found above the distal end of the Extensor carpi radialis brevis. [WP,unvetted].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:36188") AnnotationAssertion( "FMA:38497") AnnotationAssertion( "MA:0002290") AnnotationAssertion( "NCIT:C52911") AnnotationAssertion(Annotation( "ncithesaurus:Extensor_Carpi_Radialis_Brevis") "UMLS:C0224267") AnnotationAssertion(Annotation( "MA:0002290") "extensor carpi radialis brevis") AnnotationAssertion(Annotation( ) Annotation( ) "musculus extensor carpi radialis brevis") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001525") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "extensor carpi radialis brevis muscle") SubClassOf( ) SubClassOf(Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "base") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (extensor carpi ulnaris muscle) AnnotationAssertion(Annotation( ) "Extensor carpi ulnaris is a muscle located in the forearm that acts to extend and adduct the wrist. Being an extensor muscle, extensor carpi ulnaris is on the posterior side of the forearm. [WP].") AnnotationAssertion( "Note that we make the insertion relationship a taxon GCI until digit numbering issues are resolved") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0010281") Annotation( "AAO"^^xsd:string) Annotation( "AAO:EJS"^^xsd:string) "Muscle of the forearm: It shares a common origin with two other muscles of the forearm. It arises from the lateral epicondyle of the humerus by two tendons: the first one is in common with the m. extensor digitorum communis longus, and the second one is broad and in common with the m. epicondylocubitalis. It is pinnately attached to the dorsal surface of the distal carpal 5-4-3.[AAO]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010281") AnnotationAssertion( "EMAPA:36190") AnnotationAssertion( "FMA:38506") AnnotationAssertion( "MA:0002292") AnnotationAssertion( "NCIT:C52914") AnnotationAssertion(Annotation( "ncithesaurus:Extensor_Carpi_Ulnaris") "UMLS:C0224272") AnnotationAssertion( "ECU muscle") AnnotationAssertion( "extensor carpi ulnaris") AnnotationAssertion( "musculus extensor carpi ulnaris") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001526") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "extensor carpi ulnaris muscle") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/2/25/Extensor_carpi_ulnaris_muscle.png"^^xsd:anyURI) AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/5/5f/Gray418.png"^^xsd:anyURI) SubClassOf(Annotation( "Wikipedia"^^xsd:string) ) SubClassOf(Annotation( "deep part") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (abductor pollicis longus) AnnotationAssertion(Annotation( ) "The Abductor pollicis longus lies immediately below the Supinator and is sometimes united with it. [WP,unvetted].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:36210") AnnotationAssertion( "FMA:38515") AnnotationAssertion( "MA:0002266") AnnotationAssertion( "NCIT:C52888") AnnotationAssertion(Annotation( "ncithesaurus:Abductor_Pollicis_Longus") "UMLS:C0224278") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "abductor pollicis longus muscle") AnnotationAssertion(Annotation( ) Annotation( ) "musculus abductor pollicis longus") AnnotationAssertion( "UBERON:0001527") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "abductor pollicis longus") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/6/66/Gray1231.png"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (radio-ulnar joint) AnnotationAssertion(Annotation( ) "A joint that connects the radius and the ulna. Examples: proximal and distal radio-ulnar joints.") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:19206") AnnotationAssertion( "FMA:38863") AnnotationAssertion( "MA:0003145") AnnotationAssertion( "OpenCyc:Mx4rvlO2nJwpEbGdrcN5Y29ycA") AnnotationAssertion( "articulation of the radus and ulna") AnnotationAssertion(Annotation( "FMA:38863") "radioulnar joint") AnnotationAssertion( "uberon") AnnotationAssertion( "radioulnar articulation") AnnotationAssertion( "UBERON:0001528") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "radio-ulnar joint") AnnotationAssertion( "Forearm:labeled.png"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (brachiocephalic artery) AnnotationAssertion(Annotation( "MGI:csmith"^^xsd:string) Annotation( "MP:0010663") "The short first aortic arch branch and divides into the right subclavian artery and the right common carotid artery.") AnnotationAssertion(Annotation( ) "innominate") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EFO:0002550") AnnotationAssertion( "EHDAA2:0000835") AnnotationAssertion( "EMAPA:17615") AnnotationAssertion( "FMA:3932") AnnotationAssertion( "GAID:476") AnnotationAssertion( "MA:0001922") AnnotationAssertion( "MESH:D016122") AnnotationAssertion( "NCIT:C32814") AnnotationAssertion( "OpenCyc:Mx4rv9mMTpwpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Innominate_Artery") "UMLS:C0006094") AnnotationAssertion( "galen:BrachioCephalicArtery") AnnotationAssertion(Annotation( "MA:0001922") "brachiocephalic trunk") AnnotationAssertion(Annotation( ) "innominate artery") AnnotationAssertion(Annotation( "FMA:3932") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "truncus brachiocephalicus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "truncus brachiocephalicus") AnnotationAssertion( "UBERON:0001529") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "brachiocephalic artery") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/e/e6/Gray506.svg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (common carotid artery plus branches) AnnotationAssertion(Annotation( ) "A bilaterally paired branched artery that originates from the aortic arches and divides into and includes as parts the internal and external carotid arteries[cjm].") AnnotationAssertion( "we follow the FMA and treat the artery as a tree-structure - here we include the internal and external as parts. For the part that excludes the branches, see 'trunk of common carotid artery'") AnnotationAssertion( "This class represents the adult and developing structures'") AnnotationAssertion( "in birds and reptiles, develops from arch III and parts of ventral and dorsal aortae") AnnotationAssertion(Annotation( "FMA:3939") "carotid artery") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "CALOHA:TS-0116") AnnotationAssertion( "EHDAA2:0000217") AnnotationAssertion( "EHDAA:7331") AnnotationAssertion( "EMAPA:17855") AnnotationAssertion( "FMA:3939") AnnotationAssertion( "GAID:479") AnnotationAssertion( "MA:0001926") AnnotationAssertion( "MESH:D017536") AnnotationAssertion( "NCIT:C32352") AnnotationAssertion(Annotation( "ncithesaurus:Common_Carotid_Artery") "UMLS:C0162859") AnnotationAssertion( "VHOG:0000272") AnnotationAssertion(Annotation( "EHDAA2:0000217") "carotid artery system") AnnotationAssertion(Annotation( "FMA:3939") Annotation( ) "common carotid artery") AnnotationAssertion(Annotation( "FMA:3939") "trunk of common carotid tree") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "a. carotis communis") AnnotationAssertion( "UBERON:0001530") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "common carotid artery plus branches") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/e/e6/Gray506.svg"^^xsd:anyURI) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ) SubClassOf(Annotation( "Wikipedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (right common carotid artery plus branches) AnnotationAssertion(Annotation( "UBERON:cjm"^^xsd:string) "The rightmost of the two common carotid arteries, originating from in the neck from the brachiocephalic trunk.") AnnotationAssertion( "placement of the MA class here is not strictly correct, as the MA class does not include the branches") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:35749") AnnotationAssertion( "FMA:3941") AnnotationAssertion( "MA:0001928") AnnotationAssertion( "NCIT:C33473") AnnotationAssertion( "OpenCyc:Mx4rtW9-AqgEEdudWQACs5b6Bw") AnnotationAssertion( "OpenCyc:Mx8Ngh4rvgHsHZwpEbGdrcN5Y29ycB4rvg7rcJwpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Right_Common_Carotid_Artery") "UMLS:C0226086") AnnotationAssertion(Annotation( "MA:0001928") "right common carotid artery") AnnotationAssertion(Annotation( "FMA:3941") "trunk of right common carotid tree") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:3941") "right common carotid artery") AnnotationAssertion( "UBERON:0001531") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "right common carotid artery plus branches") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/e/e6/Gray506.svg"^^xsd:anyURI) SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (internal carotid artery) AnnotationAssertion(Annotation( "MGI:anna"^^xsd:string) "A terminal branch of the left or right common carotid artery which supplies oxygenated blood to the brain and eyes[MP].") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000267") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( ) "Each of two arteries starting at the bifurcation of the common carotid arteries through which blood circulates to many structures and organs in the head. [TFD][VHOG]") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0011054") Annotation( "AAO"^^xsd:string) Annotation( ) "One of the major arteries of the head, it is the as the cranial continuation of the aortic arches and the dorsal aorta. It curves ventrally before resuming a dorsal course as it enters the head proper, and it lies ventral to the internal jugular vein. The internal carotid artery gives off palatine, ophthalmic, and cerebral branches by stage NF stage 41.[AAO]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010219") AnnotationAssertion( "AAO:0011054") AnnotationAssertion( "BTO:0004697") AnnotationAssertion( "EFO:0001952") AnnotationAssertion( "EHDAA2:0000873") AnnotationAssertion( "EHDAA:408") AnnotationAssertion( "EHDAA:6389") AnnotationAssertion( "EMAPA:16328") AnnotationAssertion( "FMA:3947") AnnotationAssertion( "GAID:481") AnnotationAssertion( "MA:0001930") AnnotationAssertion( "MESH:D002343") AnnotationAssertion( "NCIT:C32836") AnnotationAssertion( "OpenCyc:Mx4rvYx8KZwpEbGdrcN5Y29ycA") AnnotationAssertion( "TAO:0005081") AnnotationAssertion(Annotation( "ncithesaurus:Internal_Carotid_Artery") "UMLS:C0007276") AnnotationAssertion( "VHOG:0000267") AnnotationAssertion( "XAO:0000366") AnnotationAssertion( "ZFA:0005081") AnnotationAssertion(Annotation( "ZFA:0005081") "cranial carotid artery") AnnotationAssertion(Annotation( "AAO:0010219") "internal carotid") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "ICA") AnnotationAssertion(Annotation( ) Annotation( ) "arteria carotis interna") AnnotationAssertion( "UBERON:0001532") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "internal carotid artery") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/9/9c/Gray513.png"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "MA"^^xsd:string) ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "cjm"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (subclavian artery) AnnotationAssertion(Annotation( ) Annotation( "ISBN:0073040584"^^xsd:string) "One of two laterally paired arteries that supplies the pectoral appendages, usually branching from the dorsal aorta.") AnnotationAssertion( "Developmental relationships should be added (intersegmental artery and right dorsal aorta in EHDAA2, occipitovertebral artery in XAO)") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0010232") Annotation( "AAO"^^xsd:string) Annotation( "AAO:BJB"^^xsd:string) "Artery which supplies blood via branches to the various muscles of the shoulder region and to the forelimb.[AAO]") AnnotationAssertion(Annotation( ) "In human anatomy, the subclavian artery is a major artery of the upper thorax that mainly supplies blood to the head and arms. It is located below the clavicle, hence the name. There is a left subclavian and a right subclavian. On the left side of the body, the subclavian comes directly off the arch of aorta. On the right side of the body, the subclavian arises from the relatively short brachiocephalic artery (trunk) when it bifurcates into the subclavian and the right common carotid artery. The usual branches of the subclavian on both sides of the body are the vertebral artery, the internal thoracic artery, the thyrocervical trunk, the costocervical trunk and the dorsal scapular artery. The subclavian becomes the axillary artery at the lateral border of the first rib[WP]") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0005086") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "The pectoral (subclavian) arteries originate from the dorsal aorta and takes the blood outward into the fin from the paired portion of the dorsal aorta posterior to the last aortic arch. Kimmel et al. 1993[TAO]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010232") AnnotationAssertion( "EHDAA2:0001933") AnnotationAssertion( "EHDAA:4357") AnnotationAssertion( "EMAPA:17617") AnnotationAssertion( "FMA:3951") AnnotationAssertion( "GAID:511") AnnotationAssertion( "MA:0002045") AnnotationAssertion( "MESH:D013348") AnnotationAssertion( "NCIT:C33643") AnnotationAssertion( "OpenCyc:Mx4rvp8u1JwpEbGdrcN5Y29ycA") AnnotationAssertion( "TAO:0005086") AnnotationAssertion(Annotation( "ncithesaurus:Subclavian_Artery") "UMLS:C0038530") AnnotationAssertion( "XAO:0000365") AnnotationAssertion( "ZFA:0005086") AnnotationAssertion(Annotation( "XAO:0000365") Annotation( ) "arteria subclavia") AnnotationAssertion( "arterial tree of upper limb") AnnotationAssertion( "pectoral artery") AnnotationAssertion( "subclavian arterial tree") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "PA") AnnotationAssertion(Annotation( ) Annotation( ) "arteria subclavia") AnnotationAssertion( "UBERON:0001533") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "subclavian artery") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/e/e6/Gray506.svg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (right subclavian artery) AnnotationAssertion(Annotation( ) "The subclavian artery that supplies the right pectoral appendage.") AnnotationAssertion( "in humans, arises from the relatively short brachiocephalic artery (trunk) when it bifurcates into the subclavian and the right common carotid artery") AnnotationAssertion( "proximal part arises from right 4th aortic arch in humans") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0004514") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37384") AnnotationAssertion( "FMA:3953") AnnotationAssertion( "MA:0002047") AnnotationAssertion( "NCIT:C33490") AnnotationAssertion( "OpenCyc:Mx4rtW7hwqgEEdudWQACs5b6Bw") AnnotationAssertion( "OpenCyc:Mx8Ngh4rvgHsHZwpEbGdrcN5Y29ycB4rvp8u1JwpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Right_Subclavian_Artery") "UMLS:C0226261") AnnotationAssertion(Annotation( "FMA:3953") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "arteria subclavia dextra") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001534") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "right subclavian artery") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/e/e6/Gray506.svg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (vertebral artery) AnnotationAssertion(Annotation( "ISBN:0-683-40008-8"^^xsd:string) Annotation( "MP:0011513") "The first branch of the left and right subclavian arteries that merge to form the single midline basilar artery; branches of the vertebral arteries supply the musculature of the neck.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0002192") AnnotationAssertion( "EHDAA:5328") AnnotationAssertion( "EMAPA:17314") AnnotationAssertion( "FMA:3956") AnnotationAssertion( "GAID:518") AnnotationAssertion( "MA:0002077") AnnotationAssertion( "MESH:D014711") AnnotationAssertion( "NCIT:C12819") AnnotationAssertion( "OpenCyc:Mx4rvg_ir5wpEbGdrcN5Y29ycA") AnnotationAssertion( "TAO:0005033") AnnotationAssertion(Annotation( "ncithesaurus:Vertebral_Artery") "UMLS:C0042559") AnnotationAssertion( "VHOG:0000263") AnnotationAssertion( "ZFA:0005033") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "arteria vertebralis") AnnotationAssertion(Annotation( "ZFA:0005033") Annotation( ) "vertebral arteries") AnnotationAssertion( "UBERON:0001535") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "The two vertebral arteries and the basilar artery are sometimes together called the vertebrobasilar system, which supplies blood to the posterior part of circle of Willis and anastomoses with blood supplied to the anterior part of the circle of Willis from the carotid arteries. [WP,unvetted]") AnnotationAssertion(rdfs:label "vertebral artery") AnnotationAssertion( "Vertebral:artery.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (left common carotid artery plus branches) AnnotationAssertion(Annotation( "UBERON:cjm"^^xsd:string) "The leftmost of the two common carotid arteries, originating from the aortic arch in the thorax.") AnnotationAssertion( "placement of the MA class here is not strictly correct, as the MA class does not include the branches") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:35491") AnnotationAssertion( "FMA:4058") AnnotationAssertion( "MA:0001927") AnnotationAssertion( "NCIT:C32956") AnnotationAssertion( "OpenCyc:Mx4rdz4xcLVIEduAAAAOpmP6tw") AnnotationAssertion( "OpenCyc:Mx8Ngh4rvgIFoJwpEbGdrcN5Y29ycB4rvg7rcJwpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Left_Common_Carotid_Artery") "UMLS:C0226087") AnnotationAssertion(Annotation( "MA:0001927") "left common carotid artery") AnnotationAssertion(Annotation( "FMA:4058") "trunk of left common carotid tree") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:4058") "left common carotid artery") AnnotationAssertion( "UBERON:0001536") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "left common carotid artery plus branches") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/e/e6/Gray506.svg"^^xsd:anyURI) SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (anterior tibial artery) AnnotationAssertion(Annotation( ) "The anterior tibial artery of the lower limb carries blood to the anterior compartment of the leg and dorsal surface of the foot, from the popliteal artery. It is accompanied by a deep vein, the anterior tibial vein, along its course. It crosses the anterior aspect of the ankle joint, at which point it becomes the dorsalis pedis artery. [WP,unvetted].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37071") AnnotationAssertion( "FMA:43894") AnnotationAssertion( "MA:0002574") AnnotationAssertion( "NCIT:C12825") AnnotationAssertion( "OpenCyc:Mx4rvaHcEZwpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Anterior_Tibial_Artery") "UMLS:C0085816") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "arteria tibialis anterior") AnnotationAssertion( "UBERON:0001537") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "anterior tibial artery") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/8/81/Gray1247.png"^^xsd:anyURI) SubClassOf( ) DisjointClasses(Annotation( "lexical"^^xsd:string) ) # Class: (posterior tibial artery) AnnotationAssertion(Annotation( ) "The posterior tibial artery of the lower limb carries blood to the posterior compartment of the leg and plantar surface of the foot, from the popliteal artery. It is accompanied by a deep vein, the posterior tibial vein, along its course. [WP,unvetted].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37110") AnnotationAssertion( "FMA:43895") AnnotationAssertion( "MA:0002575") AnnotationAssertion( "NCIT:C12826") AnnotationAssertion( "OpenCyc:Mx4rwLSaQ5wpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Posterior_Tibial_Artery") "UMLS:C0086835") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "arteria tibialis posterior") AnnotationAssertion( "UBERON:0001538") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "posterior tibial artery") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/8/81/Gray1247.png"^^xsd:anyURI) SubClassOf( ) # Class: (dorsalis pedis artery) AnnotationAssertion(Annotation( ) "A blood vessel of the lower limb that carries oxygenated blood to the dorsal surface of the foot. It arises at the anterior aspect of the ankle joint and is a continuation of the anterior tibial artery. It terminates at the proximal part of the first intermetatarsal space, where it divides into two branches, the first dorsal metatarsal artery and the deep plantar artery. Along its course, it is accompanied by a deep vein, the dorsalis pedis vein. [WP,unvetted].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37077") AnnotationAssertion( "FMA:43915") AnnotationAssertion( "MA:0001942") AnnotationAssertion( "NCIT:C32478") AnnotationAssertion(Annotation( "ncithesaurus:Dorsalis_Pedis_Artery") "UMLS:C0226492") AnnotationAssertion( "galen:DorsalisPedisArtery") AnnotationAssertion(Annotation( "FMA:43915") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "arteria dorsalis pedis") AnnotationAssertion(Annotation( ) "dorsal artery of foot") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "arteria dorsalis pedis") AnnotationAssertion( "UBERON:0001539") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "dorsalis pedis artery") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/e/ee/Gray553.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (peroneal artery) AnnotationAssertion(Annotation( ) "An artery that supplies blood to the lateral compartment of the leg and is typically a branch of posterior tibial artery. [WP,unvetted].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37674") AnnotationAssertion( "FMA:43921") AnnotationAssertion( "MA:0002018") AnnotationAssertion( "NCIT:C33314") AnnotationAssertion( "OpenCyc:Mx4rwSO_s5wpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Peroneal_Artery") "UMLS:C0226476") AnnotationAssertion(Annotation( "FMA:43921") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "arteria fibularis") AnnotationAssertion( "fibular artery") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001540") AnnotationAssertion(rdfs:label "peroneal artery") AnnotationAssertion( "Fibular:artery.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (medial plantar artery) AnnotationAssertion(Annotation( ) "The medial plantar artery (internal plantar artery), much smaller than the lateral, passes forward along the medial side of the foot. It is at first situated above the Abductor hallucis, and then between it and the Flexor digitorum brevis, both of which it supplies. At the base of the first metatarsal bone, where it is much diminished in size, it passes along the medial border of the first toe, anastomosing with the first dorsal metatarsal artery. Small superficial digital branches accompany the digital branches of the medial plantar nerve and join the plantar metatarsal arteries of the first three spaces. [WP,unvetted].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37101") AnnotationAssertion( "FMA:43925") AnnotationAssertion( "MA:0001997") AnnotationAssertion( "NCIT:C32860") AnnotationAssertion( "NCIT:C52968") AnnotationAssertion(Annotation( "ncithesaurus:Medial_Plantar_Artery") "UMLS:C0226479") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "a. plantaris medialis") AnnotationAssertion( "UBERON:0001541") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "medial plantar artery") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/3/3e/Gray555.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (inguinal lymph node) AnnotationAssertion(Annotation( "MGI:cwg"^^xsd:string) Annotation( "MP:0002353") "The lymph nodes located in the groin area.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:35431") AnnotationAssertion( "FMA:44226") AnnotationAssertion( "MA:0000737") AnnotationAssertion( "NCIT:C32801") AnnotationAssertion(Annotation( "ncithesaurus:Inguinal_Lymph_Node") "UMLS:C0729596") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001542") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "inguinal lymph node") SubClassOf(Annotation( "CL:tm") ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (popliteal lymph node) AnnotationAssertion(Annotation( ) Annotation( "MGI:cwg"^^xsd:string) Annotation( "MP:0002352") "The lymph nodes which drain the legs; contained in the popliteal fossa.") AnnotationAssertion(Annotation( ) Annotation( "NCBITaxon:10090") "In the popliteal fossa between biceps femoris m. and semitendinosus m..") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:44227") AnnotationAssertion( "MA:0000738") AnnotationAssertion( "NCIT:C53146") AnnotationAssertion(Annotation( "ncithesaurus:Popliteal_Lymph_Node") "UMLS:C0588057") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "popliteal glands") AnnotationAssertion(Annotation( ) "popliteal lymph glands") AnnotationAssertion(Annotation( ) "popliteal lymph node") AnnotationAssertion( "UBERON:0001543") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "popliteal lymph node") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/6/66/Gray609.png"^^xsd:anyURI) SubClassOf(Annotation( "CL:tm") ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (popliteal vein) AnnotationAssertion(Annotation( ) "The popliteal vein course runs alongside the popliteal artery but carries the blood from the knee joint and muscles in the thigh and calf back to the heart. Its origin is defined by the junction of the posterior tibial vein and anterior tibial vein. It drains the peroneal vein before reaching the knee joint and turns into the femoral vein when leaving the adductor canal (also known as Hunter's canal). The popliteal artery extends from the femoral artery behind the popliteal fossa which is the space behind the knee. [WP,unvetted].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37181") AnnotationAssertion( "FMA:44327") AnnotationAssertion( "GAID:537") AnnotationAssertion( "MA:0002197") AnnotationAssertion( "MESH:D011152") AnnotationAssertion( "NCIT:C33339") AnnotationAssertion( "OpenCyc:Mx4rv8Ch-JwpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Popliteal_Vein") "UMLS:C0032652") AnnotationAssertion( "galen:PoplitealVein") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "vena poplitea") AnnotationAssertion( "UBERON:0001544") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "popliteal vein") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/6/66/Gray609.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) SubClassOf(Annotation( "FMA/obol"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (anterior tibial vein) AnnotationAssertion(Annotation( ) "A vein of the lower limb that carries blood from the anterior compartment of the leg to the popliteal vein which is forms when it joins with the posterior tibial vein. Like most deep veins, the anterior tibial vein is accompanied by an artery of the same name, the anterior tibial artery, along its course. [WP,unvetted].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37135") AnnotationAssertion( "FMA:44331") AnnotationAssertion( "MA:0002244") AnnotationAssertion( "NCIT:C32115") AnnotationAssertion( "OpenCyc:Mx4rvXYDl5wpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Anterior_Tibial_Vein") "UMLS:C0226833") AnnotationAssertion( "galen:AnteriorTibialVein") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "venae tibiales anteriores") AnnotationAssertion( "UBERON:0001545") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "anterior tibial vein") AnnotationAssertion( "Gray440:color.png"^^xsd:anyURI) SubClassOf(Annotation( "MA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA/obol"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA/obol"^^xsd:string) ObjectSomeValuesFrom( )) DisjointClasses(Annotation( "lexical"^^xsd:string) ) # Class: (posterior tibial vein) AnnotationAssertion(Annotation( ) "A vein of the lower limb carries blood from the posterior compartment and plantar surface of the foot to the popliteal vein which it forms when it joins with the anterior tibial vein. Like most deep veins, the posterior tibial vein is accompanied by an artery of the same name, the posterior tibial artery, along its course. [WP,unvetted].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37183") AnnotationAssertion( "FMA:44332") AnnotationAssertion( "MA:0002245") AnnotationAssertion( "NCIT:C33386") AnnotationAssertion( "OpenCyc:Mx4rwA9GD5wpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Posterior_Tibial_Vein") "UMLS:C0226832") AnnotationAssertion( "galen:PosteriorTibialVein") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "venae tibiales posteriores") AnnotationAssertion( "UBERON:0001546") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "posterior tibial vein") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/c/c7/Gray583.png"^^xsd:anyURI) SubClassOf(Annotation( "MA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA/obol"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA/obol"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (small saphenous vein) AnnotationAssertion(Annotation( ) "The small saphenous vein (also lesser saphenous vein), is a relatively large vein of the superficial posterior leg. [WP,unvetted].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0003272") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37187") AnnotationAssertion( "FMA:44333") AnnotationAssertion( "MA:0002217") AnnotationAssertion( "NCIT:C33546") AnnotationAssertion(Annotation( "ncithesaurus:Short_Saphenous_Vein") "UMLS:C0226827") AnnotationAssertion( "galen:LesserSaphenousVein") AnnotationAssertion( "lesser saphenous vein") AnnotationAssertion( "short saphenous vein") AnnotationAssertion(Annotation( ) Annotation( ) "vena saphena parva") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001547") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "small saphenous vein") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/6/62/Gray582.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (lateral marginal vein) AnnotationAssertion(Annotation( ) "A continuation of the Dorsal venous arch of the foot and is the origin of the short saphenous vein.") AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37161") AnnotationAssertion( "FMA:44359") AnnotationAssertion( "MA:0002160") AnnotationAssertion( "lateral marginal vein of foot") AnnotationAssertion( "vena marginalis lateralis") AnnotationAssertion(Annotation( "FMA:44359") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "vena marginalis lateralis pedis") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001548") AnnotationAssertion(rdfs:label "lateral marginal vein") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA/obol"^^xsd:string) ObjectSomeValuesFrom( )) DisjointClasses(Annotation( "lexical"^^xsd:string) ) # Class: (dorsal metatarsal vein) AnnotationAssertion(Annotation( ) "The dorsal metatarsal veins are veins which drain the metatarsus of the foot. [WP,unvetted].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37143") AnnotationAssertion( "FMA:44377") AnnotationAssertion( "MA:0002105") AnnotationAssertion( "NCIT:C52689") AnnotationAssertion(Annotation( "ncithesaurus:Dorsal_Metatarsal_Vein") "UMLS:C0835053") AnnotationAssertion( "metatarsal vein") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "venae metatarsales dorsales") AnnotationAssertion( "UBERON:0001549") AnnotationAssertion(rdfs:label "dorsal metatarsal vein") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (medial marginal vein) AnnotationAssertion(Annotation( ) "A continuation of the Dorsal venous arch of the foot and is the origin of the long saphenous vein.") AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37170") AnnotationAssertion( "FMA:44420") AnnotationAssertion( "MA:0002171") AnnotationAssertion( "medial marginal vein of foot") AnnotationAssertion( "vena marginalis medialis") AnnotationAssertion(Annotation( "FMA:44420") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "vena marginalis medialis pedis") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001550") AnnotationAssertion(rdfs:label "medial marginal vein") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA/obol"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (vein of hindlimb zeugopod) AnnotationAssertion(Annotation( ) "The term 'sural veins' is not sufficient to appropriately designate the complex venous system of the calf. This should be designated as soleal veins (venae solealis), the veins of the soleus muscle and gastrocnemius veins (venae gastrocnemii)") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37231") AnnotationAssertion( "FMA:44561") AnnotationAssertion( "MA:0002231") AnnotationAssertion(Annotation( "FMA:44561") "sural vein") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001551") AnnotationAssertion(rdfs:label "vein of hindlimb zeugopod") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (kidney arcuate artery) AnnotationAssertion(Annotation( ) Annotation( "MP:0011315") "One of the curved arteries at the corticomedullary border of the kidney that arise from the interlobar arteries and give rise to the interlobular arteries.") AnnotationAssertion(Annotation( "MA:0002583") "arcuate artery") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:28215") AnnotationAssertion( "FMA:70497") AnnotationAssertion( "MA:0002583") AnnotationAssertion( "renal arcuate artery") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001552") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "kidney arcuate artery") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/e/ee/Gray553.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "MA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (medial tarsal artery) AnnotationAssertion(Annotation( ) "The medial tarsal arteries are two or three small branches which ramify on the medial border of the foot and join the medial malleolar net-work.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37102") AnnotationAssertion( "FMA:44598") AnnotationAssertion( "MA:0001998") AnnotationAssertion( "NCIT:C52969") AnnotationAssertion(Annotation( "ncithesaurus:Medial_Tarsal_Artery") "UMLS:C0226495") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001553") AnnotationAssertion(rdfs:label "medial tarsal artery") SubClassOf( ) SubClassOf( ) # Class: (skin of hip) AnnotationAssertion(Annotation( ) Annotation( "UBERONREF:0000003"^^xsd:string) "A zone of skin that is part of a hip region.") AnnotationAssertion(Annotation( "MA"^^xsd:string) "in MA this isa hindlimb skin") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:18148") AnnotationAssertion( "FMA:45282") AnnotationAssertion( "MA:0000658") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "hip region zone of skin") AnnotationAssertion( "hip skin") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "hip zone of skin") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "regio coxae zone of skin") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "zone of skin of hip") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "zone of skin of hip region") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "zone of skin of regio coxae") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001554") AnnotationAssertion(rdfs:label "skin of hip") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (digestive tract) AnnotationAssertion(Annotation( ) Annotation( ) "A tube extending from the mouth to the anus.") AnnotationAssertion(Annotation( ) ) AnnotationAssertion(Annotation( ) ) AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0000112") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "The alimentary or digestive tract, and associated organs.[TAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000309") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0030259821 Ruppert EE, Fox RS, Barnes RD, Invertebrate zoology: a functional evolutionary approach (2003) p.203, ISBN:978-0521617147 Stevens CE and Hume ID, Comparative physiology of the vertebrate digestive system (2004) p.11") "The bilaterian gut is typically a complete tube that opens to the exterior at both ends. It consists of mouth, foregut, midgut, hindgut, and anus (reference 1); Although all vertebrates have a digestive tract and accessory glands, various parts of this system are not necessarily homologous, analogous, or even present in all species. Therefore, broad comparisons can be best made under the listings of headgut, foregut, midgut, pancreas and biliary system, hindgut (reference 2).[well established][VHOG]") AnnotationAssertion(Annotation( "FMA"^^xsd:string) "FMA also has a term 'gastrointestinal tract', but this includes the liver.") AnnotationAssertion(Annotation( "MA"^^xsd:string) "we place the MA and EMAPA class here, although the intent is probably a smaller region. See https://github.com/obophenotype/uberon/issues/509") AnnotationAssertion( "we following Kardong in naming the entire tube from mouth to anus the alimentary canal. Kardong calls the portion of this tract that excludes buccal cavity and pharynx the 'alimentary canal', consider adding an extra class for this") AnnotationAssertion( "gut") AnnotationAssertion( ) AnnotationAssertion( "AAO:0010023") AnnotationAssertion( "BILA:0000083") AnnotationAssertion( "BTO:0000511") AnnotationAssertion( "BTO:0000545") AnnotationAssertion( "EHDAA2:0000726") AnnotationAssertion( "EHDAA:518") AnnotationAssertion( "EMAPA:16247") AnnotationAssertion( "FBbt:00003125") AnnotationAssertion( "FMA:45615") AnnotationAssertion( "MA:0000917") AnnotationAssertion( "NCIT:C34082") AnnotationAssertion( "OpenCyc:Mx4rvVi0GpwpEbGdrcN5Y29ycA") AnnotationAssertion( "TAO:0000112") AnnotationAssertion( "TGMA:0001819") AnnotationAssertion(Annotation( "ncithesaurus:Gastrointestinal_Tract") "UMLS:C0017189") AnnotationAssertion( "VHOG:0000309") AnnotationAssertion( "WBbt:0005743") AnnotationAssertion( "ZFA:0000112") AnnotationAssertion( "galen:AlimentaryTract") AnnotationAssertion( "digestive tube") AnnotationAssertion(Annotation( "ZFA:0000112") "enteric tract") AnnotationAssertion( "alimentary canal") AnnotationAssertion( "alimentary tract") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0000058") "digestive canal") AnnotationAssertion( "gut tube") AnnotationAssertion( "UBERON:0001555") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "digestive tract") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "NCBIBook:NBK10107") ObjectSomeValuesFrom( )) # Class: (lower urinary tract) AnnotationAssertion(Annotation( "FMA:45659") "Subdivision of urinary system which consists of the urinary bladder and the urethra.") AnnotationAssertion( ) AnnotationAssertion( "FMA:45659") AnnotationAssertion( "MA:0002636") AnnotationAssertion( "galen:LowerUrinaryTract") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001556") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "lower urinary tract") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (upper respiratory tract) AnnotationAssertion(Annotation( ) "The segment of the respiratory tract that starts proximally with the nose and ends distally with the cricoid cartilage, before continuing to the trachea.") AnnotationAssertion(Annotation( "FMA"^^xsd:string) "Some specify that the glottis (vocal cords) is the defining line between the upper and lower respiratory tracts;[2] yet even others make the line at the cricoid cartilage. The FMA includes nose, nasopharynx, oropharynx and larynx[WP]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0002136") AnnotationAssertion( "EMAPA:17669") AnnotationAssertion( "FMA:45661") AnnotationAssertion( "MA:0000442") AnnotationAssertion( "OpenCyc:Mx4rtT2HwgJMEdyAAADggVbxzQ") AnnotationAssertion( "VHOG:0000406") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001557") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "upper respiratory tract") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/9/9f/Illu_conducting_passages.svg"^^xsd:anyURI) AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/c/c3/Illu_conducting_passages.jpg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lower respiratory tract) AnnotationAssertion(Annotation( ) Annotation( ) "The segment of the respiratory tract that starts proximally with the trachea and includes all distal structures including the lungs[WP,modified].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0001036") AnnotationAssertion( "EMAPA:16738") AnnotationAssertion( "FMA:45662") AnnotationAssertion( "MA:0000435") AnnotationAssertion( "OpenCyc:Mx4rQRqjUgAKEdyHxgDggVfs8g") AnnotationAssertion( "VHOG:0000382") AnnotationAssertion( "lower respiratory system") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001558") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "lower respiratory tract") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/9/9f/Illu_conducting_passages.svg"^^xsd:anyURI) AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/c/c3/Illu_conducting_passages.jpg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete head of organ) AnnotationAssertion( "FMA:45729") AnnotationAssertion( "MA:0000581") AnnotationAssertion(Annotation( "MA:0000581") "head organ") AnnotationAssertion( "organ head") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001559") AnnotationAssertion(rdfs:comment "incorrect grouping") AnnotationAssertion(rdfs:label "obsolete head of organ") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (neck of organ) AnnotationAssertion( "FMA:45733") AnnotationAssertion( "organ neck") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001560") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "neck of organ") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (subcostal artery) AnnotationAssertion(Annotation( ) "An artery that runs along the bottom of the lowest rib. They constitute the lowest pair of branches derived from the thoracic aorta, and are in series with the intercostal arteries. Each passes along the lower border of the twelfth rib behind the kidney and in front of the Quadratus lumborum muscle, and is accompanied by the twelfth thoracic nerve. It then pierces the posterior aponeurosis of the Transversus abdominis, and, passing forward between this muscle and the Obliquus internus, anastomoses with the superior epigastric, lower intercostal, and lumbar arteries. Each subcostal artery gives off a posterior branch which has a similar distribution to the posterior ramus of an intercostal artery. [WP,unvetted].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:19097") AnnotationAssertion( "FMA:4613") AnnotationAssertion( "MA:0002048") AnnotationAssertion( "NCIT:C53000") AnnotationAssertion(Annotation( "ncithesaurus:Subcostal_Artery") "UMLS:C0226293") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001561") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "subcostal artery") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (digastric muscle group) AnnotationAssertion(Annotation( ) "A group of muscles (or in some classifications, muscle bellies) that are located under the jaw and attach to the base of the cranium and typically attaches to the hyoid apparatus via a common tendon.") AnnotationAssertion( "this class refers to the mereological sum of digastric muscles in an organism (typically two).") AnnotationAssertion(Annotation( ) "The digastric muscle (also digastricus) (named digastric as it has two bellies) is a small muscle located under the jaw. It lies below the body of the mandible, and extends, in a curved form, from the mastoid process to the symphysis menti. It belongs to the suprahyoid muscles group. A broad aponeurotic layer is given off from the tendon of the digastricus on either side, to be attached to body and greater cornu of the hyoid bone; this is termed the suprahyoid aponeurosis. Wikipedia:Digastric_muscle].") AnnotationAssertion(Annotation( "FEED:rd") "In most mammals there is a common tendon between the ant. and post. muscles, which also makes a connection to the hyoid apparatus, and then the other attachment is to the base of the cranium") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:25134") AnnotationAssertion( "FMA:46291") AnnotationAssertion( "MA:0002288") AnnotationAssertion( "NCIT:C32462") AnnotationAssertion(Annotation( "ncithesaurus:Digastric_Muscle") "UMLS:C0224155") AnnotationAssertion(Annotation( "MA:0002288") "digastric") AnnotationAssertion(Annotation( ) Annotation( ) "musculus digastricus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:46291") "digastric") AnnotationAssertion(Annotation( ) "digastric muscle") AnnotationAssertion(Annotation( ) "digastricus") AnnotationAssertion(Annotation( ) "musculus digastricus") AnnotationAssertion( "UBERON:0001562") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "digastric muscle group") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/2/26/Digastricus.png"^^xsd:anyURI) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf(Annotation( "anterior belly - mandibular division of the trigeminal via the mylohyoid nerve; posterior belly - facial nerve") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "Orangutan DOI:10.1007/BF02547558") Annotation( "Intermediate tendon") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (longus capitis muscle) AnnotationAssertion(Annotation( ) "A muscle that arises by four tendinous slips from the transverse processes of the third, fourth, fifth, and sixth cervical vertebrae and inserts into the inferior surface of the basilar part of the occipital bone.[WP,modified].") AnnotationAssertion( "flexion of neck at atlanto-occipital joint") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010666") AnnotationAssertion( "EMAPA:25131") AnnotationAssertion( "FMA:46308") AnnotationAssertion( "MA:0002340") AnnotationAssertion( "NCIT:C52956") AnnotationAssertion(Annotation( "ncithesaurus:Longus_Capitis") "UMLS:C0224107") AnnotationAssertion(Annotation( "MA:0002340") "longus capitis") AnnotationAssertion(Annotation( "AAO:0010666") "m. rectus capitis posterior") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "longus capitus muscle") AnnotationAssertion(Annotation( ) Annotation( ) "musculus longus capitis") AnnotationAssertion(Annotation( ) "rectus capitis anticus major") AnnotationAssertion( "UBERON:0001563") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "longus capitis muscle") AnnotationAssertion( "Longus:capitis.png"^^xsd:anyURI) SubClassOf(Annotation( "FMA-abduced") ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "anterior tubercles of the transverse processes of the third fourth fifth and sixth cervical vertebrae") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "basilar part of the occipital bone") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (mylohyoid muscle) AnnotationAssertion(Annotation( "MFMO:0000084") "The mylohyoid is a pharyngeal arch I muscle that participates in oral/pharyngeal behaviors and is innervated by the nerve to mylohyoid and attaches to the midline raphe linking right and left mylohyoid and the mandible.") AnnotationAssertion(Annotation( "2012-07-02"^^xsd:string) Annotation( "FEED"^^xsd:string) Annotation( "http://www.feedexp.org"^^xsd:string) "The mylohyoid is a pharyngeal arch I muscle that participates in oral/pharyngeal behaviors and is innervated by the nerve to mylohyoid and attaches to the midline raphe linking R and L mylohyoid and the mandible.[FEED]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:25136") AnnotationAssertion( "FMA:46320") AnnotationAssertion( "MA:0002344") AnnotationAssertion( "MFMO:0000084") AnnotationAssertion( "NCIT:C52962") AnnotationAssertion(Annotation( "ncithesaurus:Mylohyoid") "UMLS:C0224159") AnnotationAssertion(Annotation( ) "musculus mylohyoideus") AnnotationAssertion(Annotation( ) "mylohyoid") AnnotationAssertion(Annotation( ) "mylohyoideus") AnnotationAssertion(Annotation( ) "mylohyoideus muscle") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "musculus mylohyoideus") AnnotationAssertion( "UBERON:0001564") AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "Taxon motes: mylohyoideus and digastricus anterior of rats derived from intermandibularis posterior, see e.g. Jarvik [53] http://www.biomedcentral.com/1471-213X/8/24/table/T3") AnnotationAssertion(rdfs:label "mylohyoid muscle") AnnotationAssertion( "Mylohyoid:muscle.PNG"^^xsd:anyURI) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ) SubClassOf(Annotation( "mylohyoid nerve from inferior alveolar branch of mandibular nerve V3") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "body of hyoid bone and median raphe") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (geniohyoid muscle) AnnotationAssertion(Annotation( "MFMO:0000068") "The geniohyoid is a muscle that attaches to the mandible and the hyoid apparatus and is innervated by the first cervical nerve (C1).") AnnotationAssertion(Annotation( "2012-07-02"^^xsd:string) Annotation( "FEED"^^xsd:string) Annotation( "http://www.feedexp.org"^^xsd:string) "The geniohyoid is a muscle that attaches to the mandible and the hyoid apparatus and is innervated by C1.[FEED]") AnnotationAssertion( "draws hyoid cranially") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:36626") AnnotationAssertion( "FMA:46325") AnnotationAssertion( "MA:0002308") AnnotationAssertion( "NCIT:C52930") AnnotationAssertion(Annotation( "ncithesaurus:Geniohyoid") "UMLS:C0224160") AnnotationAssertion( "genio-hyoideus") AnnotationAssertion( "genio-hyoideus muscle") AnnotationAssertion(Annotation( ) "geniohyoid") AnnotationAssertion(Annotation( ) "geniohyoideus") AnnotationAssertion(Annotation( ) "geniohyoideus muscle") AnnotationAssertion( "m. geniohyoideus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "musculus geniohyoideus") AnnotationAssertion( "UBERON:0001565") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "geniohyoid muscle") AnnotationAssertion( "Geniohyoid:muscle.PNG"^^xsd:anyURI) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ) SubClassOf(Annotation( "C1 via the hypoglossal nerve") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "C1 via the hypoglossal nerve") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (cricothyroid muscle) AnnotationAssertion(Annotation( "MFMO:0000324") "Intrinsic muscle of the larynx, innervated by the external division of the laryngeal nerve, a branch of the vagus nerve. It attaches to the anterolateral surface of the cricoid cartilage and the external surface of the thyroid cartilage.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:19270") AnnotationAssertion( "FMA:46417") AnnotationAssertion( "MA:0002284") AnnotationAssertion( "MFMO:0000324") AnnotationAssertion( "NCIT:C32404") AnnotationAssertion(Annotation( "ncithesaurus:Cricothyroid_Muscle") "UMLS:C0224178") AnnotationAssertion(Annotation( ) Annotation( ) "M. cricothyroideus") AnnotationAssertion( "cricothyroid") AnnotationAssertion( "cricothyroideus") AnnotationAssertion(Annotation( "FMA:46417") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "musculus cricothyroideus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001566") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "cricothyroid muscle") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/f/f4/Musculuscricothyreoideus.png"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "external laryngeal branch of the vagus") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "Anterior and lateral cricoid cartilage") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "Inferior cornu and lamina of the thyroid cartilage") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (cheek) AnnotationAssertion(Annotation( ) Annotation( ) "A fleshy subdivision of one side of the face bounded by an eye, ear and the nose.") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0002113") Annotation( "TAO"^^xsd:string) Annotation( "TAO:wd"^^xsd:string) "Surface structure that includes the scales, skin, and muscles that are located ventral and posterior to the eye.[TAO]") AnnotationAssertion( "buccal") AnnotationAssertion( "In many animals the inside of the cheek is lined with mucous membrane covered with stratified squamous epithelium and supplied with secretions from buccal glands.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0001754") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37451") AnnotationAssertion( "FMA:46476") AnnotationAssertion( "GAID:65") AnnotationAssertion( "MA:0002475") AnnotationAssertion( "MESH:D002610") AnnotationAssertion( "NCIT:C13070") AnnotationAssertion( "OpenCyc:Mx4rvVi5WZwpEbGdrcN5Y29ycA") AnnotationAssertion( "TAO:0002113") AnnotationAssertion(Annotation( "ncithesaurus:Cheek") "UMLS:C0007966") AnnotationAssertion( "galen:Cheek") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "buccae") AnnotationAssertion(Annotation( ) "jowl") AnnotationAssertion( "UBERON:0001567") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "cheek") AnnotationAssertion( "Chica:cachetona.jpg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA-abduced-lr"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (muscle of larynx) AnnotationAssertion(Annotation( "MP:0002263") "The muscles associated with the larynx.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0001626") AnnotationAssertion( "EMAPA:35473") AnnotationAssertion( "FMA:46562") AnnotationAssertion( "GAID:144") AnnotationAssertion( "MA:0001768") AnnotationAssertion( "MESH:D007821") AnnotationAssertion( "NCIT:C32934") AnnotationAssertion(Annotation( "ncithesaurus:Laryngeal_Muscle") "UMLS:C0023054") AnnotationAssertion( "laryngeal muscle") AnnotationAssertion( "larynx muscle") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "larynx muscle organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "muscle organ of larynx") AnnotationAssertion( "musculi laryngeales") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001568") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "muscle of larynx") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "prolog"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (constrictor muscle of pharynx) AnnotationAssertion(Annotation( ) "Pharyngeal constrictor refers to one of the muscles that serves to constrict the pharynx. They include: Superior pharyngeal constrictor muscle Middle pharyngeal constrictor muscle Inferior pharyngeal constrictor muscle.") AnnotationAssertion( "TODO - evaluate taxonomic specificity - functional definition?") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:18964") AnnotationAssertion( "FMA:46620") AnnotationAssertion( "MA:0002278") AnnotationAssertion( "pharyngeal constrictor muscle") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001569") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "constrictor muscle of pharynx") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/a/ac/Musculusconstrictorpharyngissuperior.png"^^xsd:anyURI) SubClassOf( ) # Class: (inferior pharyngeal constrictor) AnnotationAssertion(Annotation( ) "The inferior pharyngeal constrictor, the thickest of the three constrictors, arises from the sides of the cricoid and thyroid cartilage. Similarly to the superior and middle pharyngeal constrictor muscles, it is innervated by the vagus nerve (cranial nerve X), specifically, by branches from the pharyngeal plexus and by neuronal branches from the recurrent laryngeal nerve. [WP,unvetted].") AnnotationAssertion(Annotation( "2012-07-02"^^xsd:string) Annotation( "FEED"^^xsd:string) Annotation( "http://www.feedexp.org"^^xsd:string) "This is a pharyngeal arch 4/6 muscle that is integral to the pharyngeal tube, participates in oral/pharyngeal behaviors, is innervated by the pharyngeal plexus of the vagus n. and attaches to the laryngeal cartilages and the midline raphe.[FEED]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:18965") AnnotationAssertion( "FMA:46623") AnnotationAssertion( "MA:0002279") AnnotationAssertion(Annotation( "MA:0002279") "constrictor muscle of pharynx inferior") AnnotationAssertion( "constrictores pharyngis caudales") AnnotationAssertion(Annotation( "FMA:46623") "inferior constrictor") AnnotationAssertion(Annotation( "FMA:46623") "inferior constrictor of pharynx") AnnotationAssertion(Annotation( "FMA:46623") "inferior constrictor pharyngeus") AnnotationAssertion(Annotation( "FMA:46623") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "musculus constrictor pharyngis inferior") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) Annotation( ) "musculus constrictor pharyngis inferior") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "constrictor inferior") AnnotationAssertion(Annotation( ) "constrictor pharyngis inferior") AnnotationAssertion(Annotation( ) "inferior constrictor") AnnotationAssertion(Annotation( ) "inferior constrictor muscle") AnnotationAssertion(Annotation( ) "inferior pharyngeal constrictor") AnnotationAssertion(Annotation( ) Annotation( ) "musculus constrictor pharyngis inferior") AnnotationAssertion( "UBERON:0001570") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "inferior pharyngeal constrictor") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/2/22/Musculusconstrictorpharyngisinferior.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "cricoid and thyroid cartilage") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "Wikipedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (genioglossus muscle) AnnotationAssertion(Annotation( ) Annotation( "VHOG:0000847") "Either of a pair of lingual muscles with origin in the mandible, with insertion to the lingual fascia below the mucous membrane and epiglottis, with nerve supply from the hypoglossal nerve, and whose action depresses and protrudes the tongue.") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000847") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( ) "Either of a pair of lingual muscles with origin in the mandible, with insertion to the lingual fascia below the mucous membrane and epiglottis, with nerve supply from the hypoglossal nerve, and whose action depresses and protrudes the tongue. [TFD][VHOG]") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0010660") Annotation( "AAO"^^xsd:string) Annotation( "AAO:BMZ") "Makes up bulk of tongue in frogs and salamanders; makes up entire tongue in caecilians.[AAO]") AnnotationAssertion(Annotation( "2012-07-02"^^xsd:string) Annotation( "FEED"^^xsd:string) Annotation( "http://www.feedexp.org"^^xsd:string) "see Intrinsic Tongue.[FEED]") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0010660") Annotation( "AAO"^^xsd:string) "relationship loss: subclass hyobranchial muscles (AAO:0000224)[AAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000847") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "DOI:10.1002/dvdy.20587, DOI:10.1186/1471-213X-8-24 Table 7") "The lamprey head contains another group of muscles, the epi- and hypo-branchial muscles (EBM and HBM), derivatives of anterior trunk myotomes. (...) The origin and the migration pattern of HBM precursors are very similar to that of the gnathostome MPP, especially to that of the tongue muscle precursors. Other evidence of homology of lamprey HBM to the gnathostome tongue muscle is that HBM is innervated by the nerve termed the hypoglossal nerve based on its morphological position associated with the head/trunk interface. (...) The HBM-specific expression of the LampPax3/7 gene is consistent with the homology of this muscle to the gnathostome tongue muscle, or to the hypobranchial series as a whole (including the infrahyoid and possibly the diaphragm in mammals).[well established][VHOG]") AnnotationAssertion(Annotation( "AAO:0010660") "Makes up bulk of tongue in frogs and salamanders; makes up entire tongue in caecilians.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010660") AnnotationAssertion( "EHDAA2:0000704") AnnotationAssertion( "EHDAA:9150") AnnotationAssertion( "EMAPA:18276") AnnotationAssertion( "FMA:46690") AnnotationAssertion( "MA:0002307") AnnotationAssertion( "NCIT:C52928") AnnotationAssertion(Annotation( "ncithesaurus:Genioglossus") "UMLS:C0224194") AnnotationAssertion( "VHOG:0000847") AnnotationAssertion( "genioglossus") AnnotationAssertion( "m. genioglossus") AnnotationAssertion( "musculus genioglossus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001571") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "genioglossus muscle") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/7/7e/Genioglossus.png"^^xsd:anyURI) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "Wikipedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (hyoglossus muscle) AnnotationAssertion(Annotation( "FEED:rd") "A muscle that attaches to the hyopid bone and to the tongue and is innervated by cranial nerve XII.") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0010663") Annotation( "AAO"^^xsd:string) Annotation( "AAO:BMZ") "Makes up part of the tongue in frogs and salamanders.[AAO]") AnnotationAssertion(Annotation( "2012-07-02"^^xsd:string) Annotation( "FEED"^^xsd:string) Annotation( "http://www.feedexp.org"^^xsd:string) "The hyoglossus is a muscle that attaches to the hyoid and tongue and is innervated by Cranial Nerve XII.[FEED]") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0010663") Annotation( "AAO"^^xsd:string) "relationship loss: subclass hyobranchial muscles (AAO:0000224)[AAO]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010663") AnnotationAssertion( "EMAPA:18277") AnnotationAssertion( "FMA:46691") AnnotationAssertion( "MA:0002317") AnnotationAssertion( "MFMO_0000064") AnnotationAssertion( "NCIT:C53161") AnnotationAssertion(Annotation( "ncithesaurus:Hyoglossus_Muscle") "UMLS:C0224196") AnnotationAssertion(Annotation( ) "hyoglossus") AnnotationAssertion( "m. hyoglossus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001572") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "hyoglossus muscle") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/7/7e/Hyoglossus.png"^^xsd:anyURI) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "lingual process in horse") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (styloglossus) AnnotationAssertion(Annotation( ) "The Styloglossus, the shortest and smallest of the three styloid muscles, arises from the anterior and lateral surfaces of the styloid process, near its apex, and from the stylomandibular ligament. Passing downward and forward between the internal and external carotid arteries, it divides upon the side of the tongue near its dorsal surface, blending with the fibers of the Longitudinalis inferior in front of the Hyoglossus; the other, oblique, overlaps the Hyoglossus and decussates with its fibers. [WP,unvetted].") AnnotationAssertion(Annotation( "2012-07-02"^^xsd:string) Annotation( "FEED"^^xsd:string) Annotation( "http://www.feedexp.org"^^xsd:string) "Styloglossus is a muscle that attaches to the tongue and stylohyal and is innervated by Cranial Nerve XII.[FEED]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:18279") AnnotationAssertion( "FMA:46692") AnnotationAssertion( "MA:0002387") AnnotationAssertion( "NCIT:C53071") AnnotationAssertion(Annotation( "ncithesaurus:Styloglossus") "UMLS:C0224195") AnnotationAssertion( "syloglossus muscle") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "musculus styloglossus") AnnotationAssertion( "UBERON:0001573") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "styloglossus") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/1/16/Styloglossus.png"^^xsd:anyURI) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf(Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "tip and sides of tongue") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (palatoglossus muscle) AnnotationAssertion(Annotation( ) "The palatoglossus, glossopalatinus, or palatoglossal muscle is a small fleshy fasciculus, narrower in the middle than at either end, forming, with the mucous membrane covering its surface, the glossopalatine arch. It arises from the anterior surface of the soft palate, where it is continuous with the muscle of the opposite side, and passing downward, forward, and lateralward in front of the palatine tonsil, is inserted into the side of the tongue, some of its fibers spreading over the dorsum, and others passing deeply into the substance of the organ to intermingle with the Transversus linguæ. [WP,unvetted].") AnnotationAssertion(Annotation( "2012-07-02"^^xsd:string) Annotation( "FEED"^^xsd:string) Annotation( "http://www.feedexp.org"^^xsd:string) "Palatoglossus is a muscle that attaches to the soft palate and the tongue and is innervated by Cranial Nerve X via the pharyngeal plexus.[FEED]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:18278") AnnotationAssertion( "FMA:46697") AnnotationAssertion( "MA:0002351") AnnotationAssertion( "NCIT:C53170") AnnotationAssertion(Annotation( "ncithesaurus:Palatoglossus_Muscle") "UMLS:C1704249") AnnotationAssertion( "palatoglossal") AnnotationAssertion( "palatoglossal muscle") AnnotationAssertion( "palatoglossus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "musculus palatoglossus") AnnotationAssertion( "UBERON:0001574") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "palatoglossus muscle") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/6/6e/Gray1014.png"^^xsd:anyURI) AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/c/c7/Gray1028.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "Wikipedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "aponeurosis") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (extrinsic muscle of tongue) AnnotationAssertion(Annotation( ) Annotation( ) "A muscle organ that attaches the tongue to some other structure.") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000825") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "DOI:10.1002/dvdy.20587 Kusakabe R, Kuratani S, Evolution and developmental patterning of the vertebrate skeletal muscles: perspectives from the lamprey. Developmental Dynamics (2005)") "The lamprey head contains another group of muscles, the epi- and hypo-branchial muscles (EBM and HBM), derivatives of anterior trunk myotomes. (...) The origin and the migration pattern of HBM precursors are very similar to that of the gnathostome MPP, especially to that of the tongue muscle precursors. Other evidence of homology of lamprey HBM to the gnathostome tongue muscle is that HBM is innervated by the nerve termed the hypoglossal nerve based on its morphological position associated with the head/trunk interface. (...) The HBM-specific expression of the LampPax3/7 gene is consistent with the homology of this muscle to the gnathostome tongue muscle, or to the hypobranchial series as a whole (including the infrahyoid and possibly the diaphragm in mammals).[well established][VHOG]") AnnotationAssertion(Annotation( "WP"^^xsd:string) "main functions are altering the tongue's position allowing for protrusion, retraction, and side-to-side movement") AnnotationAssertion(Annotation( "WP"^^xsd:string) "All intrinsic and extrinsic muscles of the tongue are supplied by the hypoglossal nerve (CN XII), except for one of the extrinsic muscles, palatoglossus, which is innervated by the Vagus nerve CN X of the pharyngeal plexus.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0002063") AnnotationAssertion( "EHDAA:9148") AnnotationAssertion( "EMAPA:18275") AnnotationAssertion( "FMA:46699") AnnotationAssertion( "MA:0002296") AnnotationAssertion( "VHOG:0000825") AnnotationAssertion( "extrinsic lingual muscle") AnnotationAssertion( "extrinsic tongue muscle") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001575") AnnotationAssertion(rdfs:label "extrinsic muscle of tongue") SubClassOf(Annotation( "true"^^xsd:string) ) SubClassOf(Annotation( "check palatoglossus") Annotation( "Wikipedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (intrinsic muscle of tongue) AnnotationAssertion(Annotation( ) "The intrinsic tongue muscles are an integral part of the tongue and completely contained within the tongue that are innervated by Cranial Nerve XII.") AnnotationAssertion(Annotation( "2012-07-02"^^xsd:string) Annotation( "FEED"^^xsd:string) Annotation( "http://www.feedexp.org"^^xsd:string) "The intrinsic tongue muscles are an integral part of the tongue that are innervated by Cranial Nerve XII.[FEED]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000748") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "DOI:10.1002/dvdy.20587 Kusakabe R, Kuratani S, Evolution and developmental patterning of the vertebrate skeletal muscles: perspectives from the lamprey. Developmental Dynamics (2005)") "The lamprey head contains another group of muscles, the epi- and hypo-branchial muscles (EBM and HBM), derivatives of anterior trunk myotomes. (...) The origin and the migration pattern of HBM precursors are very similar to that of the gnathostome MPP, especially to that of the tongue muscle precursors. Other evidence of homology of lamprey HBM to the gnathostome tongue muscle is that HBM is innervated by the nerve termed the hypoglossal nerve based on its morphological position associated with the head/trunk interface. (...) The HBM-specific expression of the LampPax3/7 gene is consistent with the homology of this muscle to the gnathostome tongue muscle, or to the hypobranchial series as a whole (including the infrahyoid and possibly the diaphragm in mammals).[well established][VHOG]") AnnotationAssertion(Annotation( "WP"^^xsd:string) "The main function of the intrinsic muscles is to provide shape. They are not involved with changing the position of the tongue and are not attached to bone") AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0002064") AnnotationAssertion( "EHDAA:9152") AnnotationAssertion( "EMAPA:18280") AnnotationAssertion( "FMA:46701") AnnotationAssertion( "MA:0002327") AnnotationAssertion( "VHOG:0000748") AnnotationAssertion( "intrinsic lingual muscle") AnnotationAssertion( "intrinsic tongue muscle") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001576") AnnotationAssertion(rdfs:label "intrinsic muscle of tongue") SubClassOf(Annotation( "true"^^xsd:string) ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FEED"^^xsd:string) Annotation( "Wikipedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (facial muscle) AnnotationAssertion(Annotation( "FEED:rd") "A muscle innervated by a facial nerve.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:46751") AnnotationAssertion( "GAID:143") AnnotationAssertion( "MA:0003160") AnnotationAssertion( "MESH:D005152") AnnotationAssertion( "MFMO:0000005") AnnotationAssertion( "NCIT:C13073") AnnotationAssertion(Annotation( "ncithesaurus:Facial_Muscle") "UMLS:C0015460") AnnotationAssertion( "XAO:0001013") AnnotationAssertion(Annotation( "FMA:46751") "face muscle") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "face muscle organ") AnnotationAssertion(Annotation( "FMA:46751") "facial muscle") AnnotationAssertion(Annotation( "XAO:0001013") "facial muscle") AnnotationAssertion( "facial muscle proper") AnnotationAssertion(Annotation( ) "facial nerve innervated muscle") AnnotationAssertion( "facial nerve muscle") AnnotationAssertion(Annotation( "FMA:46751") "muscle of face") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "muscle organ of face") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "EMAPA:25133") "cranial-facial muscle") AnnotationAssertion(Annotation( "EMAPA:25133") "cranio-facial muscle") AnnotationAssertion(Annotation( "EMAPA:25133") "craniofacial muscle") AnnotationAssertion(Annotation( ) "mimetic muscles") AnnotationAssertion(Annotation( ) "muscle of facil expression") AnnotationAssertion(Annotation( ) "muscles of facial expression") AnnotationAssertion(Annotation( ) Annotation( ) "musculi faciei") AnnotationAssertion( "UBERON:0001577") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "facial muscle") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/f/fa/Gray378.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FEED"^^xsd:string) Annotation( "Wikipedia"^^xsd:string) ObjectSomeValuesFrom( )) DisjointClasses( ) # Class: (orbicularis oculi muscle) AnnotationAssertion(Annotation( ) "A circumorbital muscle in the face that closes the eyelid[HP].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:35619") AnnotationAssertion( "FMA:46779") AnnotationAssertion( "MA:0001254") AnnotationAssertion( "NCIT:C52886") AnnotationAssertion(Annotation( "ncithesaurus:Orbicularis_Oculi") "UMLS:C0224122") AnnotationAssertion(Annotation( ) "orbicularis oculi") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "musculus orbicularis oculi") AnnotationAssertion(Annotation( ) "tensor tarsi") AnnotationAssertion( "UBERON:0001578") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "It arises from the nasal part of the frontal bone, from the frontal process of the maxilla in front of the lacrimal groove, and from the anterior surface and borders of a short fibrous band, the medial palpebral ligament. From this origin, the fibers are directed lateralward, forming a broad and thin layer, which occupies the eyelids or palpebræ, surrounds the circumference of the orbit, and spreads over the temple, and downward on the cheek. The palpebral portion of the muscle is thin and pale; it arises from the bifurcation of the medial palpebral ligament, forms a series of concentric curves, and is inserted into the lateral palpebral raphé. The orbital portion is thicker and of a reddish color; its fibers form a complete ellipse without interruption at the lateral palpebral commissure; the upper fibers of this portion blend with the Frontalis and Corrugator. The lacrimal part (Tensor tarsi) is a small, thin muscle, about 6 mm. in breadth and 12 mm. in length, situated behind the medial palpebral ligament and lacrimal sac. It arises from the posterior crest and adjacent part of the orbital surface of the lacrimal bone, and passing behind the lacrimal sac, divides into two slips, upper and lower, which are inserted into the superior and inferior tarsi medial to the puncta lacrimalia; occasionally it is very indistinct. [WP,unvetted]. [Wikipedia:Orbicularis_oculi_muscle]") AnnotationAssertion(rdfs:label "orbicularis oculi muscle") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/e/e2/Gray379.png"^^xsd:anyURI) SubClassOf(Annotation( "MA"^^xsd:string) ) SubClassOf( ) SubClassOf(Annotation( "branches of the facial nerve and Zygomatic branches of Facial Nerve") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses( ) # Class: (olfactory nerve) AnnotationAssertion(Annotation( ) Annotation( "ISBN:0471209627") "Nerve that carries information from the olfactory epithelium to the olfactory bulb[Butler and Hodos].") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0010088") Annotation( "AAO"^^xsd:string) Annotation( "AAO:DSM") "Nerve that carries information from the olfactory epithelium through the olfactory bulb to the olfactory cortex of the telencephalon.[AAO]") AnnotationAssertion(Annotation( "FMA:46787") "Segment of neural tree organ which is continuous with the olfactory epithelium and an olfactory bulb[FMA:46787].") AnnotationAssertion(Annotation( "MESH:A08.800.800.120.640") "The 1st cranial nerve. The olfactory nerve conveys the sense of smell. It is formed by the axons of OLFACTORY RECEPTOR NEURONS which project from the olfactory epithelium (in the nasal epithelium) to the OLFACTORY BULB[MESH:A08.800.800.120.640].") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000703") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0030223693 Liem KF, Bemis WE, Walker WF, Grande L, Functional Anatomy of the Vertebrates: An Evolutionary Perspective (2001) p.43, ISBN:978-0072528305 Kardong KV, Vertebrates: Comparative Anatomy, Function, Evolution (2006) p.625") "We conclude this section by listing some of the many synapomorphies of craniates, including (...) (5) cranial nerves (...) (reference 1); Phylogenetically, the cranial nerves are thought to have evolved from dorsal and ventral nerves of a few anterior spinal nerves that became incorporated into the braincase. Dorsal and ventral nerves fuse in the trunk but not in the head, and they produce two series: dorsal cranial nerves (V, VII, IX, and X) and ventral cranial nerves (III, IV, VI, and XIII) (reference 2).[well established][VHOG]") AnnotationAssertion( "connects to main OB (in taxa where main/accessory distinction is important)") AnnotationAssertion(Annotation( "BIRNLEX:1319") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "1n") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010088") AnnotationAssertion( "BAMS:1n") AnnotationAssertion( "BAMS:ln") AnnotationAssertion( "BIRNLEX:1319") AnnotationAssertion( "BTO:0003648") AnnotationAssertion( "EHDAA2:0001293") AnnotationAssertion( "EHDAA:6672") AnnotationAssertion( "EMAPA:17797") AnnotationAssertion( "FMA:46787") AnnotationAssertion( "GAID:830") AnnotationAssertion( "HBA:9300") AnnotationAssertion( "MA:0001096") AnnotationAssertion( "MBA:840") AnnotationAssertion( "MESH:D009832") AnnotationAssertion( "NCIT:C12759") AnnotationAssertion( "OpenCyc:Mx4rvZuXAJwpEbGdrcN5Y29ycA") AnnotationAssertion( "TAO:0000249") AnnotationAssertion(Annotation( "BIRNLEX:1319") "UMLS:C0028938") AnnotationAssertion(Annotation( "ncithesaurus:Olfactory_Nerve") "UMLS:C0028938") AnnotationAssertion(Annotation( "BIRNLEX:1319") "UMLS:C1268984") AnnotationAssertion( "VHOG:0000703") AnnotationAssertion( "XAO:0000426") AnnotationAssertion( "ZFA:0000249") AnnotationAssertion(Annotation( "BIRNLEX:1319") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=32") AnnotationAssertion( "first cranial nerve") AnnotationAssertion(Annotation( "FMA:46787") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "nervus olfactorius [i]") AnnotationAssertion(Annotation( "EHDAA2:0001293") "olfactory I") AnnotationAssertion( "olfactory i nerve") AnnotationAssertion( "olfactory nerve [I]") AnnotationAssertion( "uberon") AnnotationAssertion( "CN-I") AnnotationAssertion( "cranial nerve I") AnnotationAssertion(Annotation( "BTO:0003648") "fila olfactoria") AnnotationAssertion(Annotation( "NeuroNames:32") "nerve I") AnnotationAssertion(Annotation( "BTO:0003648") "nerve of smell") AnnotationAssertion(Annotation( ) Annotation( ) "nervus olfactorius") AnnotationAssertion(Annotation( "BTO:0003648") "nervus olfactorius") AnnotationAssertion(Annotation( "NeuroNames:32") "olfactoria fila") AnnotationAssertion(Annotation( "BTO:0003648") "olfactory fila") AnnotationAssertion( "UBERON:0001579") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "olfactory nerve") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/b/be/Gray771.png"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "ISBN:0471888893"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "ISBN:0471888893"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (levator labii superioris) AnnotationAssertion(Annotation( ) "The levator labii superioris (or quadratus labii superioris) is a broad sheet, the origin of which extends from the side of the nose to the zygomatic bone. Its medial fibers form the angular head, which arises by a pointed extremity from the upper part of the frontal process of the maxilla and passing obliquely downward and lateralward divides into two slips. One of these is inserted into the greater alar cartilage and skin of the nose; the other is prolonged into the lateral part of the upper lip, blending with the infraorbital head and with the Orbicularis oris. The intermediate portion or infraorbital head arises from the lower margin of the orbit immediately above the infraorbital foramen, some of its fibers being attached to the maxilla, others to the zygomatic bone. Its fibers converge, to be inserted into the muscular substance of the upper lip between the angular head and the Caninus. The lateral fibers, forming the zygomatic head, arise from the malar surface of the zygomatic bone immediately behind the zygomaticomaxillary suture and pass downward and medialward to the upper lip. [WP,unvetted].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37503") AnnotationAssertion( "FMA:46805") AnnotationAssertion( "MA:0002333") AnnotationAssertion( "MFMO:0000136") AnnotationAssertion( "NCIT:C53164") AnnotationAssertion(Annotation( "ncithesaurus:Levator_Labii_Superioris") "UMLS:C1704248") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "musculus levator labii superioris") AnnotationAssertion( "UBERON:0001580") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "levator labii superioris") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/8/8f/Levator_labii_superioris.png"^^xsd:anyURI) SubClassOf(Annotation( "FEED"^^xsd:string) ) SubClassOf(Annotation( "Skin and muscle of the upper lip") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "Skin and muscle of the upper lip") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (depressor labii inferioris) AnnotationAssertion(Annotation( "MFMO:0000123") "A muscle of facial expression, innervated by the facial nerve, attached to the skin of the lower lip, orbicularis oris muscle, and mandible, and superficial and lateral to the mentalis muscle. See Diogo et al., 2009; Burrows et al., 2011).") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37516") AnnotationAssertion( "FMA:46816") AnnotationAssertion( "MA:0002287") AnnotationAssertion( "MFMO:0000123") AnnotationAssertion( "NCIT:C53152") AnnotationAssertion(Annotation( "ncithesaurus:Depressor_Labii_Inferioris") "UMLS:C0224119") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001581") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "depressor labii inferioris") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/9/96/Depressor_labii_inferioris.png"^^xsd:anyURI) SubClassOf(Annotation( "true"^^xsd:string) ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA-abduced-lr"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "oblique line of the mandible between the symphysis and the mental foramen") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "integument of the lower lip Orbicularis oris fibers its fellow of the opposite side") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "integument of the lower lip Orbicularis oris fibers its fellow of the opposite side") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (buccinator muscle) AnnotationAssertion(Annotation( ) Annotation( "FEED:cw") Annotation( "FEED:rd") Annotation( "MFMO:0000002") "The buccinator is a muscle that is attached to the mandible, skin, pterygomandibular raphe and maxilla, and is innervated by Cranial Nerve VII and participates in oropharyngeal behavior.") AnnotationAssertion( "logical definition provided by FEED") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37453") AnnotationAssertion( "FMA:46834") AnnotationAssertion( "MA:0002272") AnnotationAssertion( "MFMO:0000002") AnnotationAssertion( "NCIT:C53150") AnnotationAssertion(Annotation( "ncithesaurus:Buccinator") "UMLS:C0224121") AnnotationAssertion( "buccinator") AnnotationAssertion( "musculus buccinator") AnnotationAssertion(Annotation( "MFMO:0000002") Annotation( "NCBITaxon:9606"^^xsd:string) "trumpeters muscle") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "MFMO:0000002") "buccinatorius") AnnotationAssertion(Annotation( ) Annotation( ) "musculus buccinator") AnnotationAssertion( "UBERON:0001582") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "buccinator muscle") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/d/df/Buccinator.jpg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "from the alveolar processes of the maxillary bone and mandible temporomandibular joint") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "dbpedia says: in the fibers of the orbicularis oris") Annotation( "FEED"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (extrinsic auricular muscle) AnnotationAssertion(Annotation( ) Annotation( ) "Auricular muscle attaching the cartilage of the ear to the epicranial aponeurosis. The 3 extrinsic auricular muscles in humans are: anterior auricular muscle superior auricular muscle posterior auricular muscle [WP,modified].") AnnotationAssertion( "Wikipedia topic refers to the extrinsic auricular muscles") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37527") AnnotationAssertion( "FMA:46854") AnnotationAssertion( "MA:0001230") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001583") AnnotationAssertion(rdfs:label "extrinsic auricular muscle") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/0/00/Gray906.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (left subclavian artery) AnnotationAssertion(Annotation( ) "The subclavian artery that supplies the left pectoral appendage.") AnnotationAssertion( "in humans, branches off the arch of aorta") AnnotationAssertion( "arises from left intersegmental 6th artery in the region of the 6th -7th cervical segment in humans") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37100") AnnotationAssertion( "FMA:4694") AnnotationAssertion( "MA:0002046") AnnotationAssertion( "NCIT:C32972") AnnotationAssertion( "OpenCyc:Mx4rtW7hw6gEEdudWQACs5b6Bw") AnnotationAssertion( "OpenCyc:Mx8Ngh4rvgIFoJwpEbGdrcN5Y29ycB4rvp8u1JwpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Left_Subclavian_Artery") "UMLS:C0226262") AnnotationAssertion(Annotation( "FMA:4694") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "arteria subclavia (sinistra)") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001584") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "left subclavian artery") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/e/e6/Gray506.svg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (anterior vena cava) AnnotationAssertion(Annotation( ) Annotation( ) "A vein that carries deoxygenated blood from the upper half of the body into the right atrium of the heart.") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001195") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0072528305 Kardong KV, Vertebrates: Comparative Anatomy, Function, Evolution (2006) p.454-455") "Phylogenetic modifications within this basic pattern of arteries and veins are largely correlated with functional changes. In the transition from water to land, gills gave way to lungs, accompanied by the establishment of a pulmonary circulation. In some fishes and certainly in tetrapods, the cardinal veins become less involved in blood return. Instead, the composite, prominent postcava (posterior vena cava) arose to drain the posterior part of the body and the precava (anterior vena cava) developed to drain the anterior part of the body.[well established][VHOG]") AnnotationAssertion( "The mouse has both left and right anterior vena cava. adult humans only have a right. Postnatally the left regresses and becomes non-functional (Wessels and Sedmera 2003). In the mouse, The right pulmonary vein passes dorsal to the right superior vena cava, the left pulmonary dorsal to the left superior vena cava (Biology of the Laboratory Mouse, Green).") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0002683") AnnotationAssertion( "EHDAA2:0001962") AnnotationAssertion( "EHDAA:8726") AnnotationAssertion( "EMAPA:18417") AnnotationAssertion( "FMA:4720") AnnotationAssertion( "GAID:549") AnnotationAssertion( "MA:0000481") AnnotationAssertion( "MESH:D014683") AnnotationAssertion( "NCIT:C12816") AnnotationAssertion(Annotation( "ncithesaurus:Superior_Vena_Cava") "UMLS:C0042459") AnnotationAssertion( "VHOG:0001195") AnnotationAssertion( "galen:SuperiorVenaCava") AnnotationAssertion(Annotation( ) "superior caval vein") AnnotationAssertion(Annotation( "FMA:4720") "superior vena cava") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "VHOG:0001195") "cranial vena cava") AnnotationAssertion( "precava") AnnotationAssertion(Annotation( ) Annotation( ) "vena cava superior") AnnotationAssertion(Annotation( "BTO:0002683") "vena cava superior") AnnotationAssertion(Annotation( ) Annotation( ) "vena maxima") AnnotationAssertion( "UBERON:0001585") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "anterior vena cava") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/b/b4/Venenwinkel.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (internal jugular vein) AnnotationAssertion(Annotation( ) "One of two jugular veins that collect the blood from the brain, the superficial parts of the face, and the neck. [WP,unvetted].") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0010236") Annotation( "AAO"^^xsd:string) Annotation( "AAO:BJB"^^xsd:string) "Vein which receives many veins draining the palate, brain, and the orbital, nasal, and auditory regions.[AAO]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010236") AnnotationAssertion( "EHDAA2:0000877") AnnotationAssertion( "EHDAA:5407") AnnotationAssertion( "EMAPA:17620") AnnotationAssertion( "FMA:4724") AnnotationAssertion( "MA:0002157") AnnotationAssertion( "NCIT:C32849") AnnotationAssertion( "OpenCyc:Mx4rvqdb95wpEbGdrcN5Y29ycA") AnnotationAssertion( "RETIRED_EHDAA2:0000878") AnnotationAssertion(Annotation( "ncithesaurus:Internal_Jugular_Vein") "UMLS:C0226550") AnnotationAssertion( "XAO:0000382") AnnotationAssertion( "galen:InternalJugularVein") AnnotationAssertion(Annotation( "EHDAA2:0000877") "internal jugular") AnnotationAssertion( "internal jugular venous tree") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "vena jugularis interna") AnnotationAssertion( "UBERON:0001586") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "internal jugular vein") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/e/e9/Gray562.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (subclavian vein) AnnotationAssertion(Annotation( ) "The subclavian vein is a paired large vein, one on either side of the body. Their diameter is approximately that of the smallest finger.") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0010510") Annotation( "AAO"^^xsd:string) Annotation( "AAO:BJB"^^xsd:string) "Vein which collects blood from the forelimb via the brachial veins and from the muscles and skin of the trunk via the anterior epigastric and lateral veins.[AAO]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010510") AnnotationAssertion( "EHDAA2:0001934") AnnotationAssertion( "EHDAA:4455") AnnotationAssertion( "EMAPA:17621") AnnotationAssertion( "FMA:4725") AnnotationAssertion( "GAID:546") AnnotationAssertion( "MA:0002221") AnnotationAssertion( "MESH:D013350") AnnotationAssertion( "NCIT:C12794") AnnotationAssertion( "OpenCyc:Mx4rvvvtMZwpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Subclavian_Vein") "UMLS:C0038532") AnnotationAssertion( "galen:SubclavianVein") AnnotationAssertion( "subclavian venous tree") AnnotationAssertion(Annotation( ) Annotation( ) "vena subclavia") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001587") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "subclavian vein") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/9/9e/Gray1174.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (vertebral vein) AnnotationAssertion(Annotation( ) "The vertebral vein is formed in the suboccipital triangle, from numerous small tributaries which spring from the internal vertebral venous plexuses and issue from the vertebral canal above the posterior arch of the atlas. They unite with small veins from the deep muscles at the upper part of the back of the neck, and form a vessel which enters the foramen in the transverse process of the atlas, and descends, forming a dense plexus around the vertebral artery, in the canal formed by the foramina transversaria of the cervical vertebrae. This plexus ends in a single trunk, which emerges from the foramen transversarium of the sixth cervical vertebra, and opens at the root of the neck into the back part of the innominate vein near its origin, its mouth being guarded by a pair of valves. On the right side, it crosses the first part of the subclavian artery. [WP,unvetted].") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0010509") Annotation( "AAO"^^xsd:string) Annotation( "AAO:BJB"^^xsd:string) "Vein which collects blood from the muscles of the neck and drains into the internal jugular.[AAO]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010509") AnnotationAssertion( "EMAPA:36271") AnnotationAssertion( "FMA:4727") AnnotationAssertion( "MA:0002262") AnnotationAssertion( "NCIT:C53145") AnnotationAssertion( "OpenCyc:Mx4rwKt8xJwpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Vertebral_Vein") "UMLS:C0226560") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "vena vertebralis") AnnotationAssertion( "UBERON:0001588") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "vertebral vein") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/c/c9/Gray563.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (internal thoracic vein) AnnotationAssertion(Annotation( ) "A vessel that drains the chest wall and breats and arises from the superior epigastric vein, accompanies the internal thoracic artery along its course and terminates in the brachiocephalic vein..") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:18641") AnnotationAssertion( "FMA:4729") AnnotationAssertion( "MA:0002237") AnnotationAssertion( "NCIT:C52698") AnnotationAssertion(Annotation( "ncithesaurus:Internal_Thoracic_Vein") "UMLS:C0226633") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "internal mammary vein") AnnotationAssertion(Annotation( ) Annotation( ) "vena thoracica interna") AnnotationAssertion( "UBERON:0001589") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "internal thoracic vein") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/4/4d/Gray577.png"^^xsd:anyURI) SubClassOf(Annotation( "MA"^^xsd:string) ) # Class: (pericardiacophrenic vein) AnnotationAssertion(Annotation( ) "Vena comitans of the pericardiacophrenic arteries.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37178") AnnotationAssertion( "FMA:4742") AnnotationAssertion( "MA:0002187") AnnotationAssertion( "NCIT:C53061") AnnotationAssertion(Annotation( "ncithesaurus:Pericardiacophrenic_Vein") "UMLS:C0501112") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "venae pericardiacophrenicae") AnnotationAssertion( "UBERON:0001590") AnnotationAssertion(rdfs:label "pericardiacophrenic vein") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/7/75/Gray530.png"^^xsd:anyURI) SubClassOf( ) # Class: (thymic vein) AnnotationAssertion(Annotation( ) "A vein that drains blood from the thymus.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:36325") AnnotationAssertion( "FMA:4747") AnnotationAssertion( "MA:0002246") AnnotationAssertion( "NCIT:C53143") AnnotationAssertion(Annotation( "ncithesaurus:Thymic_Vein") "UMLS:C0226698") AnnotationAssertion( "thymic tributary of brachiocephalic vein") AnnotationAssertion(Annotation( ) Annotation( ) "vena thymica") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "venae thymicae") AnnotationAssertion( "UBERON:0001591") AnnotationAssertion(rdfs:label "thymic vein") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (bronchial vein) AnnotationAssertion(Annotation( ) "The bronchial veins are small vessels that return blood from the larger bronchi and structures at the roots of the lungs. The right side drains into the azygos vein, while the left side drains into the left superior intercostal vein or the accessory hemiazygos vein. The bronchial veins are counterparts to the bronchial arteries. The veins, however, do not return all of the blood supplied by the arteries; much of the blood that is carried in the bronchial arteries is returned to the heart via the pulmonary veins. [WP,unvetted].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:36284") AnnotationAssertion( "FMA:4749") AnnotationAssertion( "MA:0002088") AnnotationAssertion( "NCIT:C53031") AnnotationAssertion(Annotation( "ncithesaurus:Bronchial_Vein") "UMLS:C0226650") AnnotationAssertion( "bronchial venous tree") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001592") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "bronchial vein") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (venous plexus) AnnotationAssertion(Annotation( ) "A congregation of multiple veins.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:36327") AnnotationAssertion( "FMA:4767") AnnotationAssertion( "MA:0000069") AnnotationAssertion( "venous network") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "plexus venosus") AnnotationAssertion(Annotation( ) Annotation( ) "rete venosum") AnnotationAssertion( "UBERON:0001593") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "venous plexus") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/b/bd/Gray585.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (azygos vein) AnnotationAssertion(Annotation( ) Annotation( "MP:0011569") "An unpaired vein which in humans arises from the right ascending lumbar vein or the vena cava, enters the thorax through the aortic orifice in the diaphragm, and terminates in the superior vena cava; unlike humans, mice have a single and left-sided azygos vein that develops from the paired embryonic cardinal venous system and drains most of the right and left thoracic walls into the left anterior vena cava[MP].") AnnotationAssertion( "check development relationships in different species") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:18250") AnnotationAssertion( "FMA:4838") AnnotationAssertion( "GAID:528") AnnotationAssertion( "MA:0002085") AnnotationAssertion( "MESH:D001401") AnnotationAssertion( "NCIT:C53029") AnnotationAssertion(Annotation( "ncithesaurus:Azygos_Vein") "UMLS:C0004526") AnnotationAssertion( "galen:AzygosVein") AnnotationAssertion( "azygos venous tree") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "vena azygos") AnnotationAssertion( "UBERON:0001594") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "azygos vein") AnnotationAssertion( "Azygos:vein.png"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "ISBN:0443065837") ObjectSomeValuesFrom( )) # Class: (auricular muscle) AnnotationAssertion(Annotation( ) "A muscle that is part of the pinna and is attached to the auricular cartilage.") AnnotationAssertion( "In some mammals these muscles can adjust the direction of the pinna. In humans these muscles possess very little action. The auricularis anterior draws the auricula forward and upward; the Auricularis superior slightly raises it; and the Auricularis posterior draws it backward.") AnnotationAssertion( "auriclular") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:35159") AnnotationAssertion( "FMA:48966") AnnotationAssertion( "MA:0001229") AnnotationAssertion( "muscle of auricle") AnnotationAssertion(Annotation( ) Annotation( ) "musculi auriculares") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "attolens aurem muscle") AnnotationAssertion(Annotation( ) "attrahens aurem muscle") AnnotationAssertion(Annotation( ) "auriculares") AnnotationAssertion(Annotation( ) "auriculares anterior") AnnotationAssertion(Annotation( ) "auriculares muscles") AnnotationAssertion(Annotation( ) "auricularis") AnnotationAssertion(Annotation( ) "auricularis muscle") AnnotationAssertion(Annotation( ) "auricularis muscles") AnnotationAssertion(Annotation( ) "temporoparietalis") AnnotationAssertion( "UBERON:0001595") AnnotationAssertion(rdfs:label "auricular muscle") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/d/d2/Gray906.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "MA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (intrinsic auricular muscle) AnnotationAssertion(Annotation( ) "Auricular muscle attached only to the cartilage of the ear and not to the epicranial aponeurosis.") AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37528") AnnotationAssertion( "FMA:48967") AnnotationAssertion( "MA:0001231") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001596") AnnotationAssertion(rdfs:label "intrinsic auricular muscle") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (masseter muscle) AnnotationAssertion(Annotation( ) Annotation( "MFMO:0000075") "Pharyngeal arch 1 muscle that participates in oral/pharyngeal behaviors, is innervated by masseteric nerve branches of the trigeminal nerve (CN V), and attaches to mandible and zygomatic arch.") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000823") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0030223693 Liem KF, Bemis WE, Walker WF, Grande L, Functional Anatomy of the Vertebrates: An Evolutionary Perspective (2001) p.333-334 and same reference Table 10-4") "The division of the adductor mandibulae in the various lines of tetrapod evolution correlates with divergences in their methods of feeding. (...) As the jaws become stronger and their movements more complex in the line of evolution toward mammals, the adductor complex becomes divided into several distinct muscles (temporalis, masseter, pterygoideus, tensor tympani, tensor veli palati).[well established][VHOG]") AnnotationAssertion(Annotation( "VHOG"^^xsd:string) "The division of the adductor mandibulae in the various lines of tetrapod evolution correlates with divergences in their methods of feeding. (...) As the jaws become stronger and their movements more complex in the line of evolution toward mammals, the adductor complex becomes divided into several distinct muscles (temporalis, masseter, pterygoideus, tensor tympani, tensor veli palati)") AnnotationAssertion( "The masseter is a jaw muscle of therapsids derived from the m. adductor mandibulae externus, which originates in the adductor chamber (in the temporal fenestra) and inserts on the coronoid process and internal surface of the lower jaw.[Palaeos]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0001755") AnnotationAssertion( "EFO:0001424") AnnotationAssertion( "EHDAA2:0001067") AnnotationAssertion( "EHDAA:10561") AnnotationAssertion( "EMAPA:25135") AnnotationAssertion( "FMA:48996") AnnotationAssertion( "MA:0002343") AnnotationAssertion( "MESH:D008406") AnnotationAssertion( "MFMO:0000075") AnnotationAssertion( "NCIT:C13074") AnnotationAssertion(Annotation( "ncithesaurus:Masseter_Muscle") "UMLS:C0024876") AnnotationAssertion( "VHOG:0000823") AnnotationAssertion(Annotation( "BTO:0001755") Annotation( "FMA:48996") Annotation( "MA:0002343") "masseter") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "musculus masseter") AnnotationAssertion( "UBERON:0001597") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "masseter muscle") AnnotationAssertion(rdfs:seeAlso "https://github.com/obophenotype/uberon/issues/540"^^xsd:anyURI) AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/7/78/Illu_head_neck_muscle.jpg"^^xsd:anyURI) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "zygomatic arch and maxilla") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "zygomatic arch and maxilla") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FEED"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (temporalis muscle) AnnotationAssertion(Annotation( "MFMO:0000085") "Pharyngeal arch 1 muscle that is innervated by the deep temporal branches of the trigeminal nerve and attaches to the wall of the braincase (including the cranial vault) and mandible.") AnnotationAssertion(Annotation( "2012-07-02"^^xsd:string) Annotation( "FEED"^^xsd:string) Annotation( "http://www.feedexp.org"^^xsd:string) "Pharyngeal arch 1 muscle that is innervated by the deep temporal nerves and attaches to the wall of the braincase and mandible.[FEED]") AnnotationAssertion(Annotation( "MP:0004239") "the superior-most masticatory muscle whose action is closing the jaws; its posterior portion retracts the mandible") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000929") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0030223693 Liem KF, Bemis WE, Walker WF, Grande L, Functional Anatomy of the Vertebrates: An Evolutionary Perspective (2001) p.333-334 and Table 10-4") "The division of the adductor mandibulae in the various lines of tetrapod evolution correlates with divergences in their methods of feeding. (...) As the jaws become stronger and their movements more complex in the line of evolution toward mammals, the adductor complex becomes divided into several distinct muscles (temporalis, masseter, pterygoideus, tensor tympani, tensor veli palati).[well established][VHOG]") AnnotationAssertion( "jaw adductor muscle") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0002001") AnnotationAssertion( "EHDAA:10565") AnnotationAssertion( "EMAPA:25138") AnnotationAssertion( "FMA:49006") AnnotationAssertion( "GAID:148") AnnotationAssertion( "MA:0002390") AnnotationAssertion( "MESH:D013703") AnnotationAssertion( "NCIT:C33743") AnnotationAssertion(Annotation( "ncithesaurus:Temporal_Muscle") "UMLS:C0039487") AnnotationAssertion( "VHOG:0000929") AnnotationAssertion(Annotation( "FMA:49006") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "musculus temporalis") AnnotationAssertion( "temporal muscle") AnnotationAssertion(Annotation( "MA:0002390") "temporalis") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "musculus temporalis") AnnotationAssertion( "UBERON:0001598") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "temporalis muscle") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/d/d3/Gray382.png"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "coronoid process of the mandible.") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (stapedius muscle) AnnotationAssertion(Annotation( ) "The muscle that stabilizes the stapes bone. The stapedius emerges from a pinpoint foramen in the apex of the pyramidal eminence (a hollow, cone-shaped prominence in the posterior wall of the tympanic cavity), and inserts into the neck of the stapes. [WP,unvetted].") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000813") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0072528305 Kardong KV, Vertebrates: Comparative Anatomy, Function, Evolution (2006) p.398") "The depressor mandibulae of tetrapods, which opens the jaws, is the homologue of the levator operculi and epihyoidean. In mammals, the depressor mandibulae evolves into the stapedius (...).[well established][VHOG]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EHDAA:9029") AnnotationAssertion( "EMAPA:18586") AnnotationAssertion( "FMA:49027") AnnotationAssertion( "GAID:164") AnnotationAssertion( "MA:0001220") AnnotationAssertion( "MESH:D013198") AnnotationAssertion( "NCIT:C33611") AnnotationAssertion(Annotation( "ncithesaurus:Stapedius_Muscle") "UMLS:C0038151") AnnotationAssertion( "VHOG:0000813") AnnotationAssertion(Annotation( "EHDAA2:0001909") "stapedius") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "musculus stapedius") AnnotationAssertion( "UBERON:0001599") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "stapedius muscle") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/6/65/Musculusstapedius.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "neck of stapes") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (tensor tympani) AnnotationAssertion(Annotation( ) "The larger of the two muscles of the tympanic cavity, is contained in the bony canal above the osseous portion of the auditory tube. Its role is to dampen sounds produced from chewing. It arises from the cartilaginous portion of the auditory tube and the adjoining part of the great wing of the sphenoid, as well as from the osseous canal in which it is contained. Passing backward through the canal, it ends in a slender tendon which enters the tympanic cavity, makes a sharp bend around the extremity of the septum, known as the processus cochleariformis[1], and is inserted into the manubrium of the malleus, near its root[WP].") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000698") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0030223693 Liem KF, Bemis WE, Walker WF, Grande L, Functional Anatomy of the Vertebrates: An Evolutionary Perspective (2001) p.333-334 and same reference Table 10-4") "The division of the adductor mandibulae in the various lines of tetrapod evolution correlates with divergences in their methods of feeding. (...) As the jaws become stronger and their movements more complex in the line of evolution toward mammals, the adductor complex becomes divided into several distinct muscles (temporalis, masseter, pterygoideus, tensor tympani, tensor veli palati).[well established][VHOG]") AnnotationAssertion( "UBERON:0005238") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0002002") AnnotationAssertion( "EHDAA:10167") AnnotationAssertion( "EHDAA:10191") AnnotationAssertion( "EMAPA:18587") AnnotationAssertion( "FMA:49028") AnnotationAssertion( "GAID:166") AnnotationAssertion( "MA:0001221") AnnotationAssertion( "MESH:D013719") AnnotationAssertion( "NCIT:C33748") AnnotationAssertion(Annotation( "ncithesaurus:Tensor_Tympani") "UMLS:C0039529") AnnotationAssertion( "VHOG:0000698") AnnotationAssertion( "eustachian muscle") AnnotationAssertion(Annotation( ) "tensor tympani muscle") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "M. tensor tympani") AnnotationAssertion(Annotation( ) Annotation( ) "musculus tensor tympani") AnnotationAssertion(Annotation( ) "tympanic muscle") AnnotationAssertion( "UBERON:0001600") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "tensor tympani") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/8/82/Gray912.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "medial pterygoid nerve from the mandibular nerve") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "handle of the malleus") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (extra-ocular muscle) AnnotationAssertion(Annotation( ) Annotation( "GO:0002074") "Skeletal muscle derived from cranial mesoderm and controls eye movements.") AnnotationAssertion( "todo - resolve discrepancies in which muscles are considered extra-ocular") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000549") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( ) "Any of the six small muscles that control movement of the eyeball within the socket. [TFD][VHOG]") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0010028") Annotation( "AAO"^^xsd:string) Annotation( "AAO:EJS"^^xsd:string) "Muscles surrounding the eye (bulbus oculi) and having an effect on eye movements.[AAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000549") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0030223693 Liem KF, Bemis WE, Walker WF, Grande L, Functional Anatomy of the Vertebrates: An Evolutionary Perspective (2001) p.331") "The ability to rotate the eyeball is common to all vertebrates with well-developed eyes, regardless of the habitat in which they live, so these (extrinsic ocular) muscles tend to be conservative. They change little during the course of evolution.[well established][VHOG]") AnnotationAssertion( "extraocular") AnnotationAssertion( "Mammals have 7 extra-ocular muscles, but humans lack the M. retractor bulbi.") AnnotationAssertion( "Myofibers in extraocular muscles are derived from mesoderm, whereas muscle connective tissue cells arise from neural crest.[PMID:16638982]") AnnotationAssertion(Annotation( "BTO"^^xsd:string) "BTO and MA consider this part of the eye; we follow them here (inferred from skeletal muscle). Not clear if omission from FMA is deliberate.") AnnotationAssertion( "UBERON:0006229") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010028") AnnotationAssertion( "BTO:0001579") AnnotationAssertion( "CALOHA:TS-0305") AnnotationAssertion( "EFO:0001921") AnnotationAssertion( "EHDAA2:0000482") AnnotationAssertion( "EHDAA:5729") AnnotationAssertion( "EMAPA:18234") AnnotationAssertion( "FMA:49033") AnnotationAssertion( "MA:0001271") AnnotationAssertion( "TAO:0000511") AnnotationAssertion( "VHOG:0000549") AnnotationAssertion( "ZFA:0000511") AnnotationAssertion( "extra-ocular skeletal muscle") AnnotationAssertion(Annotation( "FMA:49033") "extraocular muscle") AnnotationAssertion(Annotation( "ZFA:0000511") "extraocular musculature") AnnotationAssertion(Annotation( "MA:0001271") "extraocular skeletal muscle") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "extrinsic eye muscle") AnnotationAssertion(Annotation( "FMA:49033") "extrinsic muscle of eyeball") AnnotationAssertion(Annotation( "EHDAA2:0000482") "extrinsic ocular muscle") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "musculi externi bulbi oculi") AnnotationAssertion( "UBERON:0001601") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "extra-ocular muscle") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/6/61/MRI_of_human_eye.jpg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "HPO:pr") ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (medial rectus extraocular muscle) AnnotationAssertion(Annotation( ) "The medial rectus muscle is a muscle in the orbit. As with most of the muscles of the orbit, it is innervated by the inferior division of the oculomotor nerve (Cranial Nerve III). This muscle shares an origin with several other extrinsic eye muscles, the anulus tendineus, or common tendon. It is the largest of the extraocular muscles and its only action is adduction of the eyeball. [WP,unvetted].") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001127") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0030223693 Liem KF, Bemis WE, Walker WF, Grande L, Functional Anatomy of the Vertebrates: An Evolutionary Perspective (2001) p.331") "The ability to rotate the eyeball is common to all vertebrates with well-developed eyes, regardless of the habitat in which they live, so these [extrinsic ocular] muscles tend to be conservative. They change little during the course of evolution.[well established][VHOG]") AnnotationAssertion( "UBERON:0004836") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010113") AnnotationAssertion( "FMA:49037") AnnotationAssertion( "MA:0001281") AnnotationAssertion( "NCIT:C33068") AnnotationAssertion( "TAO:0000301") AnnotationAssertion(Annotation( "ncithesaurus:Medial_Rectus_Muscle") "UMLS:C0582820") AnnotationAssertion( "VHOG:0001127") AnnotationAssertion( "ZFA:0000301") AnnotationAssertion( "m. rectus medialis") AnnotationAssertion(Annotation( "FMA:49037") "medial rectus") AnnotationAssertion(Annotation( "MA:0001281") "medial rectus extraocular muscle") AnnotationAssertion( "medial rectus muscle") AnnotationAssertion(Annotation( "AAO:0010113") "musculus rectus medialis") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "ZFA:0000301") Annotation( ) "medial recti") AnnotationAssertion(Annotation( ) Annotation( ) "musculus rectus medialis bulbi") AnnotationAssertion( "UBERON:0001602") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "Taxon notes (from VHOG): \"The ability to rotate the eyeball is common to all vertebrates with well-developed eyes, regardless of the habitat in which they live, so these [extrinsic ocular] muscles tend to be conservative. They change little during the course of evolution.\" Liem KF, Bemis WE, Walker WF, Grande L, Functional Anatomy of the Vertebrates: An Evolutionary Perspective, Third Edition (2001) Orlando Fla.: Harcourt College Publishers, p.331 [VHOG:0001127]") AnnotationAssertion(rdfs:label "medial rectus extraocular muscle") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/e/e8/Eyemuscles.png"^^xsd:anyURI) SubClassOf(Annotation( "MA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "inferior division of the oculomotor nerve") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) DisjointClasses(Annotation( "lexical"^^xsd:string) ) # Class: (lateral rectus extra-ocular muscle) AnnotationAssertion(Annotation( ) "The lateral rectus muscle is a muscle in the orbit. It is one of six extraocular muscles that control the movements of the eye (abduction in this case) and the only muscle innervated by the abducens nerve, cranial nerve VI. [WP,unvetted].") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0010107") Annotation( "AAO"^^xsd:string) Annotation( "AAO:EJS"^^xsd:string) "Cranial nerve VI innervated; lateral in the rectus group.[AAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001129") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0030223693 Liem KF, Bemis WE, Walker WF, Grande L, Functional Anatomy of the Vertebrates: An Evolutionary Perspective (2001) p.331") "The ability to rotate the eyeball is common to all vertebrates with well-developed eyes, regardless of the habitat in which they live, so these [extrinsic ocular] muscles tend to be conservative. They change little during the course of evolution.[well established][VHOG]") AnnotationAssertion( "UBERON:0004837") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010107") AnnotationAssertion( "FMA:49038") AnnotationAssertion( "MA:0001280") AnnotationAssertion( "NCIT:C32945") AnnotationAssertion( "TAO:0000383") AnnotationAssertion(Annotation( "ncithesaurus:Lateral_Rectus_Muscle") "UMLS:C0582821") AnnotationAssertion( "VHOG:0001129") AnnotationAssertion( "ZFA:0000383") AnnotationAssertion( "M. rectus lateralis") AnnotationAssertion(Annotation( "FMA:49038") "lateral rectus") AnnotationAssertion(Annotation( "MA:0001280") "lateral rectus extraocular muscle") AnnotationAssertion( "lateral rectus muscle") AnnotationAssertion(Annotation( "AAO:0010107") "musculus rectus lateralis") AnnotationAssertion(Annotation( "ZFA:0000383") Annotation( "ZFIN:ZDB-PUB-970121-6") "posterior rectus") AnnotationAssertion( "uberon") AnnotationAssertion( "lateral extraocular muscle") AnnotationAssertion(Annotation( "ZFA:0000383") Annotation( ) "lateral recti") AnnotationAssertion(Annotation( ) Annotation( ) "musculus rectus lateralis bulbi") AnnotationAssertion( "UBERON:0001603") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "lateral rectus extra-ocular muscle") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/e/e8/Eyemuscles.png"^^xsd:anyURI) SubClassOf(Annotation( "MA"^^xsd:string) ) SubClassOf(Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) DisjointClasses( ) # Class: (levator palpebrae superioris) AnnotationAssertion(Annotation( ) "The levator palpebrae superioris (or levator muscle of upper eyelid) is the muscle in the orbit that elevates the superior (upper) eyelid. [WP,unvetted].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:36652") AnnotationAssertion( "FMA:49041") AnnotationAssertion( "MA:0001272") AnnotationAssertion( "NCIT:C52802") AnnotationAssertion(Annotation( "ncithesaurus:Levator_Palpebrae_Superioris") "UMLS:C0224134") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001604") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "levator palpebrae superioris") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/e/e8/Eyemuscles.png"^^xsd:anyURI) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (ciliary muscle) AnnotationAssertion(Annotation( ) "The ciliary muscle is a ring of smooth muscle in the middle layer of the eye that controls the eye's accommodation for viewing objects at varying distances and regulates the flow of aqueous humour through Schlemm's canal. [WP,unvetted].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0000654") AnnotationAssertion( "EMAPA:35240") AnnotationAssertion( "FMA:49151") AnnotationAssertion( "MA:0001269") AnnotationAssertion( "NCIT:C32315") AnnotationAssertion(Annotation( "ncithesaurus:Ciliary_Muscle") "UMLS:C0559230") AnnotationAssertion(Annotation( "BTO:0000654") "musculus ciliarus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0000654") "Bowman`s muscles") AnnotationAssertion(Annotation( ) "ciliaris") AnnotationAssertion(Annotation( ) Annotation( ) "musculus ciliaris") AnnotationAssertion( "UBERON:0001605") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "ciliary muscle") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/2/28/Gray872.png"^^xsd:anyURI) SubClassOf(Annotation( "MA"^^xsd:string) ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (muscle of iris) AnnotationAssertion( "revisit this, see issue #331") AnnotationAssertion( "The muscle cells of the iris are smooth muscle in mammals and amphibians, but are striated muscle in birds and reptiles. Many fish have neither, and, as a result, their irides are unable to dilate and contract, so that the pupil always remains of a fixed size[Romer, via WP]") AnnotationAssertion( "in aves, stromal mesenchymal cells may migrate to the iris and become skeletal") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:35448") AnnotationAssertion( "FMA:49154") AnnotationAssertion( "MA:0001287") AnnotationAssertion( "iris muscle") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "iris muscle organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "muscle organ of iris") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001606") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "muscle of iris") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (sphincter pupillae) AnnotationAssertion(Annotation( ) "A sphincter muscle that is part of the iris.") AnnotationAssertion( "In humans, it functions to constrict the pupil in bright light or during accommodation. Its dimensions are about 0.75 mm wide by 0.15 mm thick. It is controlled by parasympathetic fibers that originate from the Edinger-Westphal nucleus, travel along the oculomotor nerve (CN III), synapse in the ciliary ganglion, and then enter the eye via the short ciliary nerves. Initially, all the myocytes are of the smooth muscle type, but much later in life, so that ultimately most cells are of the striated muscle type. [WP,unvetted]") AnnotationAssertion( "WP says: It is found in vertebrates and some cephalopods; this class refers to the vertebrate structure") AnnotationAssertion( "constricts iris") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0000656") AnnotationAssertion( "EMAPA:35788") AnnotationAssertion( "FMA:49157") AnnotationAssertion( "MA:0001289") AnnotationAssertion( "NCIT:C33586") AnnotationAssertion(Annotation( "ncithesaurus:Sphincter_Pupillae_Muscle") "UMLS:C0229189") AnnotationAssertion( "M. sphincter pupillae") AnnotationAssertion(Annotation( "BTO:0000656") "iris sphincter muscle") AnnotationAssertion(Annotation( "BTO:0000656") "musculus sphincter pupillae") AnnotationAssertion(Annotation( "BTO:0000656") "sphincter muscle of pupil") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "circular fibers") AnnotationAssertion(Annotation( ) "constrictor pupillae") AnnotationAssertion( "iris constrictor") AnnotationAssertion(Annotation( ) "iris constrictor muscle") AnnotationAssertion(Annotation( ) "iris sphincter") AnnotationAssertion(Annotation( ) Annotation( ) "m. sphincter pupillae") AnnotationAssertion(Annotation( ) "pupillary constrictor muscle") AnnotationAssertion(Annotation( ) "pupillary sphincter") AnnotationAssertion(Annotation( ) "pupillary sphincter muscle") AnnotationAssertion(Annotation( ) "sphincter pupillae") AnnotationAssertion(Annotation( ) "sphincter pupillae muscle") AnnotationAssertion(Annotation( ) "spincter pupillae") AnnotationAssertion( "UBERON:0001607") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "sphincter pupillae") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/2/2f/Gray878.png"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "BTO"^^xsd:string) ) SubClassOf( ) SubClassOf(Annotation( "ISBN:0781772214") ObjectSomeValuesFrom( )) SubClassOf(Annotation( "encircles iris") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "encircles iris") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (dilatator pupillae) AnnotationAssertion(Annotation( ) "A smooth muscle of the eye, running radially in the iris that functions as a dilator. [WP,unvetted].") AnnotationAssertion( "It is innervated by the sympathetic system, which acts by releasing noradrenaline, which acts on alpha1-receptors. Thus, when presented with a threatening stimuli that activates the fight-or-flight response, this innervation dilates the iris, thus temporarily letting more light reach the retina") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0001371") AnnotationAssertion( "EMAPA:35286") AnnotationAssertion( "FMA:49158") AnnotationAssertion( "MA:0001288") AnnotationAssertion( "NCIT:C32463") AnnotationAssertion(Annotation( "ncithesaurus:Dilator_Pupillae_Muscle") "UMLS:C0229190") AnnotationAssertion( "dilator muscle of pupil") AnnotationAssertion( "dilator of pupil") AnnotationAssertion( "dilator pupillae") AnnotationAssertion(Annotation( ) "dilator pupillae muscle") AnnotationAssertion(Annotation( "BTO:0001371") "iris dilator muscle") AnnotationAssertion(Annotation( "FMA:49158") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "musculus dilatator pupillae") AnnotationAssertion(Annotation( ) "pupillary dilator muscle") AnnotationAssertion(Annotation( ) "radial muscle of iris") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0001371") "dilator pupillae muscle") AnnotationAssertion(Annotation( ) "iris dilator") AnnotationAssertion(Annotation( ) Annotation( ) "musculus dilatator pupillae") AnnotationAssertion(Annotation( "BTO:0001371") "musculus dilator pupillae") AnnotationAssertion(Annotation( ) "pupil dilator") AnnotationAssertion(Annotation( ) "pupil dilator muscle") AnnotationAssertion(Annotation( ) "pupillary dilator") AnnotationAssertion(Annotation( ) "pupillary muscle") AnnotationAssertion(Annotation( ) "radial muscle") AnnotationAssertion(Annotation( ) "radiating fibers") AnnotationAssertion( "UBERON:0001608") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "dilatator pupillae") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/2/2f/Gray878.png"^^xsd:anyURI) SubClassOf(Annotation( "BTO"^^xsd:string) ) SubClassOf(Annotation( "ISBN:0781772214") ObjectSomeValuesFrom( )) SubClassOf(Annotation( "outer margins of iris") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "inner margins of iris") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (isthmus of thyroid gland) AnnotationAssertion(Annotation( "MP:0013163") "A narrow median bridge that joins together the lower thirds of the two lateral (right and left) lobes of the thyroid gland and usually covers the second and the third tracheal rings; the thyroid isthmus is variable in presence and size, can change shape and size, and can encompass a cranially extending pyramid lobe (lobus pyramidalis or processus pyramidalis), remnant of the thyroglossal duct.") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000739") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "DOI:10.1210/er.2003-0028 De Felice M, Di Lauro R, Thyroid development and its disorders: genetics and molecular mechanisms. Endocrine Reviews (2004)") "In mammals and in some reptiles, the thyroid is composed of two lobes connected by an isthmus; in birds and amphibians, the thyroid consists of two isolated lobes. (...) Despite these morphological differences, the ontogeny of the thyroid follows the same pattern in all vertebrates (...).[well established][VHOG]") AnnotationAssertion(Annotation( "VHOG:0000739") "isthmus") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0002031") AnnotationAssertion( "EHDAA:5777") AnnotationAssertion( "EMAPA:18195") AnnotationAssertion( "FMA:49178") AnnotationAssertion( "MA:0000727") AnnotationAssertion( "NCIT:C32887") AnnotationAssertion(Annotation( "ncithesaurus:Thyroid_Gland_Isthmus") "UMLS:C0229583") AnnotationAssertion( "VHOG:0000739") AnnotationAssertion(Annotation( ) "isthmus glandulae thyroideae") AnnotationAssertion( "thyroid gland isthmus") AnnotationAssertion( "thyroid isthmus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "isthmus glandulae thyroideae") AnnotationAssertion( "UBERON:0001609") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "isthmus of thyroid gland") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/9/9e/Gray1174.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses( ) # Class: (lingual artery) AnnotationAssertion(Annotation( ) "The lingual artery arises from the external carotid between the superior thyroid and facial artery[WP].") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0010492") Annotation( "AAO"^^xsd:string) Annotation( "AAO:BJB"^^xsd:string) "Part of the external carotid which supplies blood to the tongue.[AAO]") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0010492") Annotation( "AAO"^^xsd:string) "relationship loss: part_of external carotid (AAO:0010218)[AAO]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010492") AnnotationAssertion( "EMAPA:36324") AnnotationAssertion( "FMA:49526") AnnotationAssertion( "MA:0001992") AnnotationAssertion( "NCIT:C52961") AnnotationAssertion( "OpenCyc:Mx4rvfqDCZwpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Lingual_Artery") "UMLS:C0226104") AnnotationAssertion( "lingual branch of external carotid artery") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "arteria lingualis") AnnotationAssertion( "UBERON:0001610") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "lingual artery") AnnotationAssertion( "Lingual:artery.PNG"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA-abduced-lr"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (sublingual artery) AnnotationAssertion(Annotation( ) "A branch of the lingual artery that supplies the sublingual gland.") AnnotationAssertion( "Check grouping with amphibian structure of the same name") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0010491") Annotation( "AAO"^^xsd:string) Annotation( "AAO:BJB"^^xsd:string) "Part of the external carotid which supplies blood to the tip of the snout where branches go to the tongue and the m. geniohyoideus.[AAO]") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0010491") Annotation( "AAO"^^xsd:string) "relationship loss: part_of external carotid (AAO:0010218)[AAO]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010491") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37115") AnnotationAssertion( "FMA:49543") AnnotationAssertion( "MA:0002049") AnnotationAssertion( "NCIT:C53002") AnnotationAssertion(Annotation( "ncithesaurus:Sublingual_Artery") "UMLS:C0226106") AnnotationAssertion( "sublingual branch of lingual artery") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "arteria sublingualis") AnnotationAssertion( "UBERON:0001611") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "sublingual artery") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/7/7a/Gray559.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (facial artery) AnnotationAssertion(Annotation( ) "A branch of the external carotid artery that supplies structures of the face. [WP,unvetted].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:19213") AnnotationAssertion( "FMA:49549") AnnotationAssertion( "MA:0001950") AnnotationAssertion( "NCIT:C32578") AnnotationAssertion( "OpenCyc:Mx4rwCt95ZwpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Facial_Artery") "UMLS:C0226109") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "arteria maxillaris externa") AnnotationAssertion( "external maxillary artery") AnnotationAssertion( "UBERON:0001612") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "facial artery") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/7/7b/Gray508.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (occipital artery) AnnotationAssertion(Annotation( ) "The occipital artery arises opposite the facial artery, its path is below the posterior belly of digastric to the occipital region. This artery supplies blood to the back of the scalp and sterno-mastoid muscles. Other muscles it supplies are deep muscles in the back and neck. [WP,unvetted].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37672") AnnotationAssertion( "FMA:49586") AnnotationAssertion( "MA:0002009") AnnotationAssertion( "NCIT:C33194") AnnotationAssertion( "OpenCyc:Mx4rwC1IFJwpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Occipital_Artery") "UMLS:C0226117") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "arteria occipitalis") AnnotationAssertion( "UBERON:0001613") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "occipital artery") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/7/7b/Gray508.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (superficial temporal artery) AnnotationAssertion(Annotation( ) "A major artery of the head that arises from the external carotid artery when it bifurcates into the superficial temporal artery and maxillary artery. Its pulse is palpable superior to the zygomatic arch, anterior and superior to the tragus. [WP,unvetted].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0003747") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37118") AnnotationAssertion( "FMA:49650") AnnotationAssertion( "MA:0002062") AnnotationAssertion( "OpenCyc:Mx4rv33WkZwpEbGdrcN5Y29ycA") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "arteria temporalis superficialis") AnnotationAssertion( "UBERON:0001614") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "superficial temporal artery") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/a/a5/Gray1200.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) # Class: (transverse facial artery) AnnotationAssertion(Annotation( ) "The transverse facial artery is an artery that branches from the superficial temporal artery and runs across the face. [WP,unvetted].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37130") AnnotationAssertion( "FMA:49657") AnnotationAssertion( "MA:0002068") AnnotationAssertion( "NCIT:C53025") AnnotationAssertion(Annotation( "ncithesaurus:Transverse_Facial_Artery") "UMLS:C0226132") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "arteria transversa faciei") AnnotationAssertion( "UBERON:0001615") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "transverse facial artery") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/3/35/Gray515.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (maxillary artery) AnnotationAssertion(Annotation( ) "An artery that supplies deep structures of the face. It comes just out behind the neck of the mandible. [WP,unvetted].") AnnotationAssertion(Annotation( ) "...1st pair undergoes partial regression, the remnants of which becomes part of the maxillary arteries") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0001069") AnnotationAssertion( "EHDAA:7357") AnnotationAssertion( "EMAPA:17311") AnnotationAssertion( "FMA:49675") AnnotationAssertion( "GAID:498") AnnotationAssertion( "MA:0001919") AnnotationAssertion( "MESH:D008438") AnnotationAssertion( "NCIT:C34205") AnnotationAssertion( "OpenCyc:Mx4rwDDJ45wpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Maxillary_Artery") "UMLS:C0024949") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "arteria maxillaris") AnnotationAssertion( "internal maxillary artery") AnnotationAssertion( "UBERON:0001616") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "maxillary artery") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/3/39/Gray510.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (mental artery) AnnotationAssertion(Annotation( ) "The mental branch of inferior alveolar artery escapes with the nerve at the mental foramen, supplies the chin, and anastomoses with the submental and inferior labial arteries. [WP,unvetted].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37105") AnnotationAssertion( "FMA:49701") AnnotationAssertion( "MA:0002002") AnnotationAssertion( "NCIT:C52973") AnnotationAssertion(Annotation( "ncithesaurus:Mental_Artery") "UMLS:C0226144") AnnotationAssertion( "mental branch of inferior alveolar artery") AnnotationAssertion(Annotation( "FMA:49701") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "ramus mentalis (arteria alveolaris inferior)") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001617") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "mental artery") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (buccal artery) AnnotationAssertion(Annotation( ) "The buccal artery (buccinator artery) is small and runs obliquely forward, between the Pterygoideus internus and the insertion of the Temporalis, to the outer surface of the Buccinator, to which it is distributed, anastomosing with branches of the external maxillary and with the infraorbital. [WP,unvetted].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37073") AnnotationAssertion( "FMA:49754") AnnotationAssertion( "MA:0001924") AnnotationAssertion( "NCIT:C52847") AnnotationAssertion(Annotation( "ncithesaurus:Buccal_Artery") "UMLS:C0226151") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "arteria buccalis") AnnotationAssertion(Annotation( ) Annotation( ) "arteria buccinatoria") AnnotationAssertion( "UBERON:0001618") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "buccal artery") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/7/7b/Gray508.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (ophthalmic artery) AnnotationAssertion(Annotation( ) "The ophthalmic artery is a branch of the internal carotid artery which supplies branches to supply the eye and other structures in the orbit. It enters the orbit together with the Optic nerve through the Optic foramen/canal. [WP,modified].") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0010497") Annotation( "AAO"^^xsd:string) Annotation( "AAO:BJB"^^xsd:string) "Part of internal carotid which carries blood via branches to the eye, the eye muscles, and eyelids.[AAO]") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0010497") Annotation( "AAO"^^xsd:string) "relationship loss: part_of internal carotid (AAO:0010219)[AAO]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010497") AnnotationAssertion( "EHDAA2:0001300") AnnotationAssertion( "EHDAA:7363") AnnotationAssertion( "EMAPA:17007") AnnotationAssertion( "FMA:49868") AnnotationAssertion( "GAID:503") AnnotationAssertion( "MA:0002011") AnnotationAssertion( "MESH:D009880") AnnotationAssertion( "NCIT:C33216") AnnotationAssertion( "OpenCyc:Mx4rvcCxpJwpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Opthalmic_Artery") "UMLS:C0029078") AnnotationAssertion( "XAO:0000368") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "arteria ophthalmica") AnnotationAssertion(Annotation( ) "opthalmic artery") AnnotationAssertion( "UBERON:0001619") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "ophthalmic artery") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/c/ce/Gray514.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (central retinal artery) AnnotationAssertion(Annotation( ) "The central retinal artery (retinal artery) branches off the ophthalmic artery, running inferior to the optic nerve within its dural sheath to the eyeball. [WP,unvetted].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37113") AnnotationAssertion( "FMA:49879") AnnotationAssertion( "GAID:508") AnnotationAssertion( "MA:0002038") AnnotationAssertion( "MESH:D012161") AnnotationAssertion( "NCIT:C52997") AnnotationAssertion(Annotation( "ncithesaurus:Retinal_Artery") "UMLS:C0035301") AnnotationAssertion( "Zinn's artery") AnnotationAssertion( "central artery of retina") AnnotationAssertion( "retinal artery") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "arteria centralis retinae") AnnotationAssertion(Annotation( ) Annotation( ) "arteria centralis retinae") AnnotationAssertion(Annotation( ) "central artery of the retina") AnnotationAssertion( "UBERON:0001620") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "central retinal artery") AnnotationAssertion( "Gray514:updated.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "proximal portion") Annotation( "ISBN:0781772214") ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (coronary artery) AnnotationAssertion(Annotation( ) Annotation( ) "An artery that supplies the myocardium.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0000290") AnnotationAssertion( "CALOHA:TS-0176") AnnotationAssertion( "EFO:0002551") AnnotationAssertion( "EMAPA:19160") AnnotationAssertion( "EV:0100383") AnnotationAssertion( "FMA:49893") AnnotationAssertion( "MA:0002453") AnnotationAssertion( "NCIT:C12843") AnnotationAssertion( "OpenCyc:Mx4rvoL56ZwpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Coronary_Artery") "UMLS:C0205042") AnnotationAssertion( "VHOG:0001557") AnnotationAssertion( "ZFA:0005812") AnnotationAssertion( "galen:CoronaryArtery") AnnotationAssertion( "coronary arterial tree") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "ZFA:0005812") "coronary vessel") AnnotationAssertion( "UBERON:0001621") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "coronary artery") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/4/46/Gray492.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lacrimal artery) AnnotationAssertion(Annotation( ) "The lacrimal artery arises close to the optic foramen, and is one of the largest branches derived from the ophthalmic artery: not infrequently it is given off before the artery enters the orbit. It accompanies the lacrimal nerve along the upper border of the Lateral Rectus, supplies the lacrimal gland. [WP,unvetted].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37094") AnnotationAssertion( "FMA:49927") AnnotationAssertion( "MA:0001988") AnnotationAssertion( "NCIT:C52948") AnnotationAssertion(Annotation( "ncithesaurus:Lacrimal_Artery") "UMLS:C0226171") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "a. lacrimalis") AnnotationAssertion( "UBERON:0001622") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "lacrimal artery") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/c/ce/Gray514.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (dorsal nasal artery) AnnotationAssertion(Annotation( ) "The dorsal nasal artery (nasal artery) is an artery of the head. It is one of the two terminal branches of the ophthalmic artery. [WP,unvetted].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:35292") AnnotationAssertion( "FMA:50000") AnnotationAssertion( "MA:0001945") AnnotationAssertion( "NCIT:C52983") AnnotationAssertion(Annotation( "ncithesaurus:Dorsal_Nasal_Artery") "UMLS:C0226194") AnnotationAssertion(Annotation( "FMA:50000") "dorsal nasal branch of ophthalmic artery") AnnotationAssertion(Annotation( "FMA:50000") "external nasal artery") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "arteria dorsalis nasi") AnnotationAssertion( "UBERON:0001623") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "dorsal nasal artery") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/3/35/Gray515.png"^^xsd:anyURI) SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (anterior cerebral artery) AnnotationAssertion(Annotation( ) "One of a pair of arteries on the brain that supply oxygen to most medial portions of frontal lobes and superior medial parietal lobes. The 2 anterior cerebral arteries arise from the internal carotid artery and are part of the Circle of Willis.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0000128") AnnotationAssertion( "EHDAA:5296") AnnotationAssertion( "EMAPA:17854") AnnotationAssertion( "FMA:50028") AnnotationAssertion( "GAID:485") AnnotationAssertion( "MA:0001915") AnnotationAssertion( "MESH:D020771") AnnotationAssertion( "NCIT:C12829") AnnotationAssertion( "OpenCyc:Mx4rv8biO5wpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Anterior_Cerebral_Artery") "UMLS:C0149561") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "arteria cerebri anterior") AnnotationAssertion( "UBERON:0001624") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "anterior cerebral artery") AnnotationAssertion( "https://upload.wikimedia.org/wikipedia/commons/2/2e/Circle_of_Willis_en.svg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA"^^xsd:string) Annotation( "WP"^^xsd:string) ObjectSomeValuesFrom( )) DisjointClasses(Annotation( "lexical"^^xsd:string) ) # Class: (right coronary artery) AnnotationAssertion(Annotation( ) Annotation( ) "Coronary artery which runs along the right side of the heart and predominantly supplies the mycocardium of the right side of the heart[Wikipedia,modified].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0004505") AnnotationAssertion( "EMAPA:36532") AnnotationAssertion( "FMA:50039") AnnotationAssertion( "MA:0002455") AnnotationAssertion( "NCIT:C12875") AnnotationAssertion(Annotation( "ncithesaurus:Right_Coronary_Artery") "UMLS:C1261316") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "arteria coronaria dextra") AnnotationAssertion( "right coronary arterial tree") AnnotationAssertion( "UBERON:0001625") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "right coronary artery") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/4/46/Gray492.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (left coronary artery) AnnotationAssertion(Annotation( ) Annotation( ) "Coronary artery which runs along the left side of the heart and predominantly supplies the mycocardium of the left side of the heart[Wikipedia,modified].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0004504") AnnotationAssertion( "EMAPA:36531") AnnotationAssertion( "FMA:50040") AnnotationAssertion( "MA:0002454") AnnotationAssertion( "NCIT:C12872") AnnotationAssertion(Annotation( "ncithesaurus:Left_Coronary_Artery") "UMLS:C1261082") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "arteria coronaria sinistra") AnnotationAssertion( "left coronary arterial tree") AnnotationAssertion( "UBERON:0001626") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "left coronary artery") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/5/50/Gray495.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (middle cerebral artery) AnnotationAssertion(Annotation( ) "The middle cerebral artery (MCA) is one of the three major paired arteries that supplies blood to the cerebrum. The MCA arises from the internal carotid and continues into the lateral sulcus where it then branches and projects to many parts of the lateral cerebral cortex. It also supplies blood to the anterior temporal lobes and the insular cortices. The left and right MCAs rise from trifurcations of the internal carotid arteries and thus are connected to the anterior cerebral arteries and the posterior communicating arteries, which connect to the posterior cerebral arteries. The MCAs are not considered a part of the Circle of Willis. [WP,unvetted].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0005206") AnnotationAssertion( "EHDAA2:0001179") AnnotationAssertion( "EHDAA:5298") AnnotationAssertion( "EMAPA:18239") AnnotationAssertion( "FMA:50079") AnnotationAssertion( "GAID:487") AnnotationAssertion( "MA:0001935") AnnotationAssertion( "MESH:D020768") AnnotationAssertion( "NCIT:C12830") AnnotationAssertion( "OpenCyc:Mx4rvh3qQ5wpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Middle_Cerebral_Artery") "UMLS:C0149566") AnnotationAssertion( "Sylvian artery") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "arteria cerebri media") AnnotationAssertion( "UBERON:0001627") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "middle cerebral artery") AnnotationAssertion( "https://upload.wikimedia.org/wikipedia/commons/2/2e/Circle_of_Willis_en.svg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA"^^xsd:string) Annotation( "WP"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (posterior communicating artery) AnnotationAssertion(Annotation( ) "One of a pair of right-sided and left-sided blood vessels in the circle of Willis. It connects the three cerebral arteries of the same side. Anteriorly, it is one portion of the terminal trifurcation of the internal carotid artery. The anterior cerebral artery and the middle cerebral artery are the other two branches of the trifurcation. Posteriorly, it communicates with the posterior cerebral artery.") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0005001") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "An artery that connects caudal division of the internal carotid artery and the basal communicating artery to the basilar artery. Isogai et al. 2001.[TAO]") AnnotationAssertion( "todo - verify ZFA link: An artery that connects caudal division of the internal carotid artery and the basal communicating artery to the basilar artery") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0004518") AnnotationAssertion( "EHDAA:3352") AnnotationAssertion( "EMAPA:18600") AnnotationAssertion( "FMA:50084") AnnotationAssertion( "MA:0002023") AnnotationAssertion( "NCIT:C33357") AnnotationAssertion( "OpenCyc:Mx4rwDDlqpwpEbGdrcN5Y29ycA") AnnotationAssertion( "RETIRED_EHDAA2:0001487") AnnotationAssertion( "TAO:0005001") AnnotationAssertion(Annotation( "ncithesaurus:Posterior_Communicating_Artery") "UMLS:C0149559") AnnotationAssertion( "ZFA:0005001") AnnotationAssertion(Annotation( "ZFA:0005001") "caudal communicating segment") AnnotationAssertion(Annotation( "ZFA:0005001") "posterior communicating segment of the basilar artery") AnnotationAssertion( "uberon") AnnotationAssertion( "PCA") AnnotationAssertion( "PCS") AnnotationAssertion(Annotation( ) Annotation( ) "arteria cerebri communicans posterior") AnnotationAssertion( "UBERON:0001628") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "posterior communicating artery") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/2/2e/Circle_of_Willis_en.svg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA-abduced-lr"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA"^^xsd:string) Annotation( "ZFA"^^xsd:string) ObjectSomeValuesFrom( )) DisjointClasses(Annotation( "lexical"^^xsd:string) ) # Class: (carotid body) AnnotationAssertion(Annotation( "MP:0003438") "A small epithelioid structure consisting of a small cluster of chemoreceptive and supporting cells located near the bifurcation of the common carotid artery that serves as a chemoreceptive organ that senses the pH, carbon dioxide, and oxygen concentrations in the blood and plays a crucial role in their homeostatic control.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0000204") AnnotationAssertion( "EMAPA:19211") AnnotationAssertion( "FMA:50095") AnnotationAssertion( "GAID:813") AnnotationAssertion( "MA:0002463") AnnotationAssertion( "MESH:A08.800.550.700.120.600.150") AnnotationAssertion( "NCIT:C66852") AnnotationAssertion(Annotation( "ncithesaurus:Carotid_Body") "UMLS:C0007277") AnnotationAssertion(Annotation( ) "carotid glomus") AnnotationAssertion(Annotation( ) Annotation( ) "glomus caroticum") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001629") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "carotid body") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/b/b3/Gray1186.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) # Class: (muscle organ) AnnotationAssertion(Annotation( "GO:0007517") "Organ consisting of a tissue made up of various elongated cells that are specialized to contract and thus to produce movement and mechanical work[GO].") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0005145") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "Portion of tissue composed of contractile fibers.[TAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001245") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0198566694 Schmidt-Rhaesa A, The evolution of organ systems (2007) p.75") "It seems clear that the metazoan ancestor inherited from its unicellular descendants an actin cytoskeleton and motor-proteins of the myosin superfamily. Within metazoans, these two molecules were arranged into effective contractile units, the muscles. The basic trends for muscle evolution are already expressed in the diploblastic taxa.[well established][VHOG]") AnnotationAssertion( "muscular") AnnotationAssertion(Annotation( "ZFA:0005145") "muscle") AnnotationAssertion( ) AnnotationAssertion( "AAO:0011066") AnnotationAssertion( "EMAPA:32715") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37474") AnnotationAssertion( "EV:0100146") AnnotationAssertion( "FMA:5022") AnnotationAssertion( "GAID:131") AnnotationAssertion( "MA:0000015") AnnotationAssertion( "OpenCyc:Mx4rv2kf-5wpEbGdrcN5Y29ycA") AnnotationAssertion( "TAO:0005145") AnnotationAssertion( "VHOG:0001245") AnnotationAssertion( "XAO:0000172") AnnotationAssertion( "ZFA:0005145") AnnotationAssertion( "galen:Muscle") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001630") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "muscle organ") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (thoracic duct) AnnotationAssertion(Annotation( ) "A major lymphatic vessel that drains lymph from the lower body, left appendage, and left thorax into the junction of the left jugular and subclavian veins.") AnnotationAssertion( "placement of the ZFA class here is dubious") AnnotationAssertion(Annotation( "FMA:5031") "Lymphatic trunk that connects all tributaries of the thoracic duct tree to the trunk of the left brachiocephalic vein.") AnnotationAssertion(Annotation( "ZFA:0005110") "The thoracic duct is the first perfused lymphatic, located between the dorsal aorta and posterior cardinal vein.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0004501") AnnotationAssertion( "EMAPA:19310") AnnotationAssertion( "FMA:5031") AnnotationAssertion( "GAID:1290") AnnotationAssertion( "MA:0002801") AnnotationAssertion( "MESH:A15.382.520.869") AnnotationAssertion( "NCIT:C33768") AnnotationAssertion( "TAO:0005110") AnnotationAssertion(Annotation( "ncithesaurus:Thoracic_Duct") "UMLS:C0039979") AnnotationAssertion( "ZFA:0005110") AnnotationAssertion( "trunk of thoracic duct tree") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "ductus thoracicus") AnnotationAssertion( "UBERON:0001631") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "thoracic duct") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/7/75/Gray599.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "TAO"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (temporal artery) AnnotationAssertion( "This class currently groups a variety of different structures") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37127") AnnotationAssertion( "FMA:50438") AnnotationAssertion( "GAID:489") AnnotationAssertion( "MA:0002061") AnnotationAssertion( "MESH:D013699") AnnotationAssertion( "NCIT:C33741") AnnotationAssertion(Annotation( "ncithesaurus:Temporal_Artery") "UMLS:C0039482") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001632") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "temporal artery") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/a/a5/Gray1200.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) # Class: (basilar artery) AnnotationAssertion(Annotation( "BGEE:ann") "A major artery that supplues the hindbrain and runs along the ventral keel of the hindbrain.") AnnotationAssertion(Annotation( "ZFA:0005002") "Artery that runs along the ventral keel of the hindbrain. It lies between the primordial hindbrain channels(PHBC). It irrigates the hindbrain and is connected, through the hindbrain, to the PHBC by the central arteries.") AnnotationAssertion(Annotation( "MP:0013186") "The unpaired artery that is formed by the union of the two vertebral arteries, runs forward within the skull just under the pons, divides into the two posterior cerebral arteries, and supplies the pons, cerebellum, posterior part of the cerebrum, and the inner ear[MP].") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000237") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "DOI:10.1242/dev.058776 Fujita M, Cha YR, Pham VN, Sakurai A, Roman BL, Gutkind JS, Weinstein BM, Assembly and patterning of the vascular network of the vertebrate hindbrain. Development (2011)") "The major artery supplying the hindbrain, the basilar artery, runs along the ventral keel of the hindbrain in all vertebrates.[well established][VHOG]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0000163") AnnotationAssertion( "EHDAA:5285") AnnotationAssertion( "EMAPA:17307") AnnotationAssertion( "FMA:50542") AnnotationAssertion( "GAID:474") AnnotationAssertion( "MA:0001920") AnnotationAssertion( "MESH:D001488") AnnotationAssertion( "NCIT:C12676") AnnotationAssertion( "OpenCyc:Mx4rwJTtcZwpEbGdrcN5Y29ycA") AnnotationAssertion( "TAO:0005002") AnnotationAssertion(Annotation( "ncithesaurus:Basilar_Artery") "UMLS:C0004811") AnnotationAssertion( "VHOG:0000237") AnnotationAssertion( "ZFA:0005002") AnnotationAssertion( "uberon") AnnotationAssertion( "BA") AnnotationAssertion( "UBERON:0001633") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "basilar artery") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/2/2e/Circle_of_Willis_en.svg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (mesencephalic artery) AnnotationAssertion(Annotation( ) Annotation( "XAO:0004173") "The major artery of the midbrain, which crosses the midbrain medially to meet its partner the mesencephalic vein.") AnnotationAssertion( "review this term, check taxon scope") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0001068") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "Develops from the proximal portion of the primitive mesencephalic artery. Isogai et al. 2001.[TAO]") AnnotationAssertion(Annotation( "ZFA:0001068, ZFIN:ZDB-PUB-010205-5") "Develops from the proximal portion of the primitive mesencephalic artery[ZFA:0001068, ZFIN:ZDB-PUB-010205-5].") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0001068") Annotation( "TAO"^^xsd:string) "relationship loss: develops_from primitive mesencephalic artery (TAO:0001062)[TAO]") AnnotationAssertion( "FMA:50570") AnnotationAssertion( "TAO:0001068") AnnotationAssertion( "XAO:0004173") AnnotationAssertion( "ZFA:0001068") AnnotationAssertion(Annotation( "ZFA:0001068") Annotation( ) "MsA") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001634") AnnotationAssertion(rdfs:label "mesencephalic artery") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "ZFA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (superior cerebellar artery) AnnotationAssertion(Annotation( ) "The superior cerebellar artery (SCA) arises near the termination of the basilar artery. It passes lateralward, immediately below the oculomotor nerve, which separates it from the posterior cerebral artery, winds around the cerebral peduncle, close to the trochlear nerve, and, arriving at the upper surface of the cerebellum, divides into branches which ramify in the pia mater and anastomose with those of the inferior cerebellar arteries. Several branches are given to the pineal body, the anterior medullary velum, and the tela chorioidea of the third ventricle. [WP,unvetted].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0000681") AnnotationAssertion( "EMAPA:19309") AnnotationAssertion( "FMA:50573") AnnotationAssertion( "MA:0001934") AnnotationAssertion( "NCIT:C33669") AnnotationAssertion(Annotation( "ncithesaurus:Superior_Cerebellar_Artery") "UMLS:C0149575") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "arteria superior cerebelli") AnnotationAssertion( "UBERON:0001635") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "superior cerebellar artery") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/e/e1/CerebellumArteries.jpg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (posterior cerebral artery) AnnotationAssertion(Annotation( ) "The posterior cerebral artery (PCA) is one of a pair of blood vessels that supplies oxygenated blood to the posterior aspect of the brain in human anatomy]. It arises near the intersection of the posterior communicating artery and the basilar artery and connects with the ipsilateral middle cerebral artery (MCA) and internal carotid artery via the posterior communicating artery (PCommA). [WP,unvetted].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0000659") AnnotationAssertion( "EMAPA:17861") AnnotationAssertion( "FMA:50583") AnnotationAssertion( "GAID:488") AnnotationAssertion( "MA:0002022") AnnotationAssertion( "MESH:D020769") AnnotationAssertion( "NCIT:C12831") AnnotationAssertion( "OpenCyc:Mx4rwO4qIJwpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Posterior_Cerebral_Artery") "UMLS:C0149576") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "arteria cerebri posterior") AnnotationAssertion( "UBERON:0001636") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "posterior cerebral artery") AnnotationAssertion( "https://upload.wikimedia.org/wikipedia/commons/2/2e/Circle_of_Willis_en.svg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "FMA-abduced-lr"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (artery) AnnotationAssertion(Annotation( "AEO:JB"^^xsd:string) "An epithelial tube or tree of tibes that transports blood away from the heart[modified from AEO definition].") AnnotationAssertion( "Note that in FMA an artery is a tree, whereas AEO/JB defines it as a tube; FMA includes a separate class for what it calls the trunk. Classification in this ontology may currently (Jan 2012) represent a mix of both schemes, although we are gradually revising in the direction of the AEO scheme.") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0010211") Annotation( "AAO"^^xsd:string) Annotation( "AAO:BJB"^^xsd:string) "Part of the circulatory system composed of blood vessels which carry oxygenated blood away from the heart to the rest of the body.[AAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001251") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "DOI:10.1196/annals.1341.002 Bishopric NH, Evolution of the heart from bacteria to man. Annals of the New York Academy of Sciences (2006)") "The appearance of Chordata and subsequently the vertebrates is accompanied by a rapid structural diversification of this primitive linear heart: looping, unidirectional circulation, an enclosed vasculature, and the conduction system.[well established][VHOG]") AnnotationAssertion( "arterial") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010211") AnnotationAssertion( "AEO:0000208") AnnotationAssertion( "BTO:0000573") AnnotationAssertion( "CALOHA:TS-0054") AnnotationAssertion( "EFO:0000814") AnnotationAssertion( "EHDAA2:0000143") AnnotationAssertion( "EHDAA2:0003253") AnnotationAssertion( "EMAPA:35147") AnnotationAssertion( "EV:0100026") AnnotationAssertion( "FMA:50720") AnnotationAssertion( "GAID:468") AnnotationAssertion( "MA:0000064") AnnotationAssertion( "MAT:0000034") AnnotationAssertion( "MESH:D001158") AnnotationAssertion( "MIAA:0000034") AnnotationAssertion( "NCIT:C12372") AnnotationAssertion( "OpenCyc:Mx4rvVjknZwpEbGdrcN5Y29ycA") AnnotationAssertion( "TAO:0000005") AnnotationAssertion(Annotation( "ncithesaurus:Artery") "UMLS:C0003842") AnnotationAssertion( "VHOG:0001251") AnnotationAssertion( "XAO:0000114") AnnotationAssertion( "ZFA:0000005") AnnotationAssertion( "galen:Artery") AnnotationAssertion( "arterial subtree") AnnotationAssertion( "arterial tree organ part") AnnotationAssertion(Annotation( "TAO:0000005") Annotation( ) "arteries") AnnotationAssertion( "uberon") AnnotationAssertion( "arterial system") AnnotationAssertion( "arterial vessel") AnnotationAssertion( "UBERON:0001637") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "artery") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (vein) AnnotationAssertion(Annotation( ) "Any of the tubular branching vessels that carry blood from the capillaries toward the heart.") AnnotationAssertion( "TODO - check with MA - vein vs venous blood vessel") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0010212") Annotation( "AAO"^^xsd:string) Annotation( "AAO:BJB"^^xsd:string) "Part of the circulatory system composed of blood vessels which carry blood from other organs, tissues, and cells to the heart.[AAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001743") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "DOI:10.1196/annals.1341.002 Bishopric NH, Evolution of the heart from bacteria to man. Annals of the New York Academy of Sciences (2006)") "The appearance of Chordata and subsequently the vertebrates is accompanied by a rapid structural diversification of this primitive linear heart: looping, unidirectional circulation, an enclosed vasculature, and the conduction system.[well established][VHOG]") AnnotationAssertion( "venous") AnnotationAssertion( ) AnnotationAssertion( "venous subtree") AnnotationAssertion( "venous vessel") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010212") AnnotationAssertion( "AEO:0000209") AnnotationAssertion( "BTO:0000234") AnnotationAssertion( "CALOHA:TS-1108") AnnotationAssertion( "EFO:0000816") AnnotationAssertion( "EHDAA2:0003254") AnnotationAssertion( "EMAPA:35906") AnnotationAssertion( "EV:0100031") AnnotationAssertion( "FMA:50723") AnnotationAssertion( "GAID:492") AnnotationAssertion( "MA:0000067") AnnotationAssertion( "MAT:0000037") AnnotationAssertion( "MESH:D014680") AnnotationAssertion( "MIAA:0000037") AnnotationAssertion( "NCIT:C12814") AnnotationAssertion( "OpenCyc:Mx4rvVjkWpwpEbGdrcN5Y29ycA") AnnotationAssertion( "TAO:0000082") AnnotationAssertion(Annotation( "ncithesaurus:Vein") "UMLS:C0042449") AnnotationAssertion( "VHOG:0001743") AnnotationAssertion( "XAO:0000115") AnnotationAssertion( "ZFA:0000082") AnnotationAssertion( "galen:Vein") AnnotationAssertion( "venous tree organ part") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "EMAPA:th") "vascular element") AnnotationAssertion(Annotation( ) Annotation( ) "vena") AnnotationAssertion(Annotation( "VHOG:0001743") Annotation( ) "venae") AnnotationAssertion( "UBERON:0001638") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "vein") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/c/c2/Venous_system_en.svg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (hepatic portal vein) AnnotationAssertion(Annotation( ) Annotation( ) Annotation( "ISBN:0073040584"^^xsd:string) "A portal vein that transports nutrients from the digestive tract to the liver[Kardong].") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000642") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0471090588 Hildebrand M, Analysis of vertebrate structure (1983) p.265") "Adults of all vertebrates lose the vitelline veins and establish a single large hepatic portal vein (...) by the selective retention of parts of the left and right subintestinals and of several anastomoses that occur between them within and just posterior to the liver.[well established][VHOG]") AnnotationAssertion( "In humans A vein in the abdominal cavity that drains blood from the gastrointestinal tract and spleen. It is usually formed by the confluence of the superior mesenteric and splenic veins, and also receives blood from the inferior mesenteric, gastric, and cystic veins. The hepatic portal vein is a major component of the hepatic portal system, one of the main portal venous systems in the body. Conditions involving the hepatic portal vein cause considerable illness and death. An important example of such a condition is elevated blood pressure in the hepatic portal vein. This condition, called portal hypertension, is a major complication of cirrhosis worldwide. [WP,unvetted]") AnnotationAssertion( ) AnnotationAssertion( "AAO:0010214") AnnotationAssertion( "FMA:50735") AnnotationAssertion( "MA:0002132") AnnotationAssertion( "TAO:0005090") AnnotationAssertion( "VHOG:0000642") AnnotationAssertion( "ZFA:0005090") AnnotationAssertion( "hepatic portal tree") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "liver portal vein") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "portal vein of liver") AnnotationAssertion( "uberon") AnnotationAssertion( "HPV") AnnotationAssertion(Annotation( ) "portal vein") AnnotationAssertion(Annotation( "ZFA:0005090") "primary hepatic portal vein") AnnotationAssertion( "primary hepatic portal veins") AnnotationAssertion(Annotation( ) Annotation( ) "vena portae hepatis") AnnotationAssertion( "UBERON:0001639") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "hepatic portal vein") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/3/33/Gray591.png"^^xsd:anyURI) SubClassOf(Annotation( "MA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) SubClassOf( ObjectSomeValuesFrom( )) # Class: (celiac artery) AnnotationAssertion(Annotation( ) "The first major branch of the abdominal aorta.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0004519") AnnotationAssertion( "EMAPA:35202") AnnotationAssertion( "FMA:50737") AnnotationAssertion( "GAID:483") AnnotationAssertion( "MA:0001931") AnnotationAssertion( "MESH:D002445") AnnotationAssertion( "NCIT:C52846") AnnotationAssertion(Annotation( "ncithesaurus:Coeliac_Artery") "UMLS:C0007569") AnnotationAssertion( "celiac tree") AnnotationAssertion(Annotation( ) "coeliac artery") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "arteria coeliaca") AnnotationAssertion(Annotation( ) Annotation( ) "arteria cœliaca") AnnotationAssertion(Annotation( ) "celiac trunk") AnnotationAssertion(Annotation( ) "coeliac axis") AnnotationAssertion(Annotation( ) "coeliac trunck") AnnotationAssertion(Annotation( ) "coeliac trunk") AnnotationAssertion(Annotation( ) "truncus coeliacus") AnnotationAssertion(Annotation( ) Annotation( ) "truncus coeliacus") AnnotationAssertion(Annotation( ) Annotation( ) "truncus cœliacus") AnnotationAssertion( "UBERON:0001640") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "dorsal aorta in Kardong") AnnotationAssertion(rdfs:label "celiac artery") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/6/65/Gray532.png"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "ISBN:0073040584"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "ISBN:0073040584"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "ISBN:0073040584"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "ISBN:0073040584"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (transverse sinus) AnnotationAssertion(Annotation( ) "One of the dural venous sinuses and drains the superior sagittal sinus the occipital sinus and the straight sinus, and empties into the sigmoid sinus which in turn reaches the jugular bulb.") AnnotationAssertion( "TODO - check subclasses") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:18637") AnnotationAssertion( "FMA:50763") AnnotationAssertion( "MA:0001868") AnnotationAssertion( "OpenCyc:Mx4rwDb62ZwpEbGdrcN5Y29ycA") AnnotationAssertion( "ncithesaurus:Transverse_Sinus") AnnotationAssertion(Annotation( ) Annotation( ) "sinus transversus durae matris") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "groove for right and left transverse sinuses") AnnotationAssertion(Annotation( "FMA:50763") "lateral sinus") AnnotationAssertion(Annotation( ) "sinus transversus") AnnotationAssertion(Annotation( ) "transverse sinus") AnnotationAssertion(Annotation( ) "transverse sinus vein") AnnotationAssertion( "UBERON:0001641") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "transverse sinus") AnnotationAssertion( "Gray488:blue.gif"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (superior sagittal sinus) AnnotationAssertion(Annotation( ) "The superior sagittal sinus (also known as the superior longitudinal sinus), within a human cranium, is an area above/behind the brain, which allows blood veins to span the area, from the top of the head towards the back. It is believed that the cerebrospinal fluid drains through the arachnoid granulations into the dural venous sinuses of the superior sagittal sinus. [WP,unvetted].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:18636") AnnotationAssertion( "FMA:50767") AnnotationAssertion( "MA:0001867") AnnotationAssertion( "NCIT:C12515") AnnotationAssertion( "OpenCyc:Mx4rv9naEJwpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Superior_Sagittal_Sinus") "UMLS:C0226859") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "sinus sagittalis superior") AnnotationAssertion( "UBERON:0001642") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "superior sagittal sinus") AnnotationAssertion( "Gray488:blue.gif"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "cjm"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (oculomotor nerve) AnnotationAssertion(Annotation( ) Annotation( "ISBN:0471209627") "Cranial nerve which connects the midbrain to the extra-ocular and intra-ocular muscles.") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0010468") Annotation( "AAO"^^xsd:string) Annotation( "AAO:EJS"^^xsd:string) "Somatic efferent fibers which innervate four eye muscles.[AAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000692") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0030223693 Liem KF, Bemis WE, Walker WF, Grande L, Functional Anatomy of the Vertebrates: An Evolutionary Perspective (2001) p.43, ISBN:978-0072528305 Kardong KV, Vertebrates: Comparative Anatomy, Function, Evolution (2006) p.625") "We conclude this section by listing some of the many synapomorphies of craniates, including (...) (5) cranial nerves (...) (reference 1); Phylogenetically, the cranial nerves are thought to have evolved from dorsal and ventral nerves of a few anterior spinal nerves that became incorporated into the braincase. Dorsal and ventral nerves fuse in the trunk but not in the head, and they produce two series: dorsal cranial nerves (V, VII, IX, and X) and ventral cranial nerves (III, IV, VI, and XIII) (reference 2).[well established][VHOG]") AnnotationAssertion(Annotation( "BIRNLEX:1646") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "3n") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010468") AnnotationAssertion( "BAMS:3n") AnnotationAssertion( "BAMS:IIIn") AnnotationAssertion( "BIRNLEX:1646") AnnotationAssertion( "BM:MB-IIIN") AnnotationAssertion( "EHDAA2:0001284") AnnotationAssertion( "EHDAA:3736") AnnotationAssertion( "EMAPA:17574") AnnotationAssertion( "FMA:50864") AnnotationAssertion( "GAID:829") AnnotationAssertion( "HBA:9316") AnnotationAssertion( "MA:0001095") AnnotationAssertion( "MBA:832") AnnotationAssertion( "MESH:D009802") AnnotationAssertion( "NCIT:C12758") AnnotationAssertion( "OpenCyc:Mx4rvj7pZpwpEbGdrcN5Y29ycA") AnnotationAssertion( "TAO:0000405") AnnotationAssertion(Annotation( "BIRNLEX:1646") "UMLS:C0028864") AnnotationAssertion(Annotation( "ncithesaurus:Oculomotor_Nerve") "UMLS:C0028864") AnnotationAssertion( "VHOG:0000692") AnnotationAssertion( "XAO:0003090") AnnotationAssertion( "ZFA:0000405") AnnotationAssertion(Annotation( "BIRNLEX:1646") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=488") AnnotationAssertion(Annotation( ) Annotation( ) "nervus oculomotorius") AnnotationAssertion(Annotation( "FMA:50864") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "nervus oculomotorius [III]") AnnotationAssertion(Annotation( "EHDAA2:0001284") "oculomotor III") AnnotationAssertion( "oculomotor III nerve") AnnotationAssertion( "oculomotor nerve [III]") AnnotationAssertion( "oculomotor nerve tree") AnnotationAssertion( "third cranial nerve") AnnotationAssertion( "uberon") AnnotationAssertion( "CN-III") AnnotationAssertion( "cranial nerve III") AnnotationAssertion(Annotation( "NeuroNames:488") "nerve III") AnnotationAssertion( "occulomotor") AnnotationAssertion(Annotation( "BAMS:3n") "oculomotor nerve or its root") AnnotationAssertion( "UBERON:0001643") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "oculomotor nerve") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/6/69/Gray776.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "Wikipedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (trochlear nerve) AnnotationAssertion(Annotation( ) Annotation( "ISBN:0471209627") "A cranial nerve that runs to the eye muscles.") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0010469") Annotation( "AAO"^^xsd:string) Annotation( "AAO:EJS"^^xsd:string) "Somatic efferent nerve which supplies a single eye muscle, the m. obliquus superior.[AAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000705") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0030223693 Liem KF, Bemis WE, Walker WF, Grande L, Functional Anatomy of the Vertebrates: An Evolutionary Perspective (2001) p.43, ISBN:978-0072528305 Kardong KV, Vertebrates: Comparative Anatomy, Function, Evolution (2006) p.625") "We conclude this section by listing some of the many synapomorphies of craniates, including (...) (5) cranial nerves (...) (reference 1); Phylogenetically, the cranial nerves are thought to have evolved from dorsal and ventral nerves of a few anterior spinal nerves that became incorporated into the braincase. Dorsal and ventral nerves fuse in the trunk but not in the head, and they produce two series: dorsal cranial nerves (V, VII, IX, and X) and ventral cranial nerves (III, IV, VI, and XIII) (reference 2).[well established][VHOG]") AnnotationAssertion( "Homologous trochlear nerves are found in all jawed vertebrates") AnnotationAssertion( "The human trochlear nerve is derived from the basal plate of the embryonic midbrain.") AnnotationAssertion(Annotation( "BIRNLEX:1654") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "4n") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010469") AnnotationAssertion( "BAMS:4n") AnnotationAssertion( "BAMS:IVn") AnnotationAssertion( "BAMS:nIV") AnnotationAssertion( "BIRNLEX:1654") AnnotationAssertion( "BM:IVN") AnnotationAssertion( "EHDAA2:0002090") AnnotationAssertion( "EMAPA:18218") AnnotationAssertion( "FMA:50865") AnnotationAssertion( "GAID:838") AnnotationAssertion( "HBA:9319") AnnotationAssertion( "MA:0001105") AnnotationAssertion( "MBA:911") AnnotationAssertion( "MESH:D014321") AnnotationAssertion( "NCIT:C12808") AnnotationAssertion( "OpenCyc:Mx4rvyeBQ5wpEbGdrcN5Y29ycA") AnnotationAssertion( "TAO:0000600") AnnotationAssertion(Annotation( "BIRNLEX:1654") "UMLS:C0041159") AnnotationAssertion(Annotation( "ncithesaurus:Trochlear_Nerve") "UMLS:C0041159") AnnotationAssertion( "VHOG:0000705") AnnotationAssertion( "XAO:0003091") AnnotationAssertion( "ZFA:0000600") AnnotationAssertion(Annotation( "BIRNLEX:1654") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=466") AnnotationAssertion(Annotation( "VHOG:0000705") Annotation( "ZFA:0000600") "cranial nerve IV") AnnotationAssertion( "fourth cranial nerve") AnnotationAssertion(Annotation( "FMA:50865") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "nervus trochlearis [IV]") AnnotationAssertion( "superior oblique nerve") AnnotationAssertion(Annotation( "MA:0001105") "trochlear IV nerve") AnnotationAssertion( "trochlear nerve [IV]") AnnotationAssertion( "trochlear nerve tree") AnnotationAssertion( "uberon") AnnotationAssertion( "CN-IV") AnnotationAssertion(Annotation( "NeuroNames:466") "nerve IV") AnnotationAssertion(Annotation( ) Annotation( ) "nervus trochlearis") AnnotationAssertion(Annotation( "VHOG:0000705") "pathetic nerve") AnnotationAssertion(Annotation( "VHOG:0000705") "trochlear") AnnotationAssertion(Annotation( "BAMS:4n") "trochlear nerve or its root") AnnotationAssertion(Annotation( "BAMS:4n") "trochlear nerve/root") AnnotationAssertion( "UBERON:0001644") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "trochlear nerve") AnnotationAssertion( "Trochlear:nerve.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (trigeminal nerve) AnnotationAssertion(Annotation( ) Annotation( "ISBN:0471209627") "Cranial nerve that has three branches - the ophthalmic (supplying the skin of the nose and upper jaw), the maxillary and the mandibular (supplying the lower jaw).") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0010470") Annotation( "AAO"^^xsd:string) Annotation( "AAO:EJS"^^xsd:string) "Nerve consists of motor and sensory components. Ganglion cells of the sensory component form the proximal part of the trigeminal (Gasserian) ganglion. From the ganglion 3 major rami innervate jaws, snout, and buccal roof.[AAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000704") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0030223693 Liem KF, Bemis WE, Walker WF, Grande L, Functional Anatomy of the Vertebrates: An Evolutionary Perspective (2001) p.43, ISBN:978-0072528305 Kardong KV, Vertebrates: Comparative Anatomy, Function, Evolution (2006) p.625") "We conclude this section by listing some of the many synapomorphies of craniates, including (...) (5) cranial nerves (...) (reference 1); Phylogenetically, the cranial nerves are thought to have evolved from dorsal and ventral nerves of a few anterior spinal nerves that became incorporated into the braincase. Dorsal and ventral nerves fuse in the trunk but not in the head, and they produce two series: dorsal cranial nerves (V, VII, IX, and X) and ventral cranial nerves (III, IV, VI, and XIII) (reference 2).[well established][VHOG]") AnnotationAssertion(Annotation( "ISBN:0471888893"^^xsd:string) "the ophthalmic usually usually merges with the other two. In some vertebrates, the ophthalmic emerges from the brain separately[Kardong] The trigeminal nerve has 3 branches in mammals - similar branches are present in nonmammalian vertebrates, but in some a separate profundus nerve that corresponds to opthalmic branch in mammls") AnnotationAssertion(Annotation( "BIRNLEX:869") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "5n") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010470") AnnotationAssertion( "BAMS:5n") AnnotationAssertion( "BAMS:Vn") AnnotationAssertion( "BAMS:nV") AnnotationAssertion( "BIRNLEX:869") AnnotationAssertion( "BM:VN") AnnotationAssertion( "BTO:0001072") AnnotationAssertion( "EFO:0001402") AnnotationAssertion( "EHDAA2:0002084") AnnotationAssertion( "EHDAA:3738") AnnotationAssertion( "EMAPA:17576") AnnotationAssertion( "FMA:50866") AnnotationAssertion( "GAID:726") AnnotationAssertion( "HBA:9322") AnnotationAssertion( "MA:0001100") AnnotationAssertion( "MBA:901") AnnotationAssertion( "MESH:D014276") AnnotationAssertion( "MFMO:0000093") AnnotationAssertion( "NCIT:C12806") AnnotationAssertion( "OpenCyc:Mx4rwMF8CJwpEbGdrcN5Y29ycA") AnnotationAssertion( "TAO:0000697") AnnotationAssertion(Annotation( "BIRNLEX:869") "UMLS:C0040996") AnnotationAssertion(Annotation( "ncithesaurus:Trigeminal_Nerve") "UMLS:C0040996") AnnotationAssertion( "VHOG:0000704") AnnotationAssertion( "XAO:0003092") AnnotationAssertion( "ZFA:0000697") AnnotationAssertion(Annotation( "BIRNLEX:869") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=549") AnnotationAssertion( "fifth cranial nerve") AnnotationAssertion(Annotation( ) Annotation( ) "nervus trigeminus") AnnotationAssertion(Annotation( "FMA:50866") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "nervus trigeminus [v]") AnnotationAssertion(Annotation( "EHDAA2:0002084") "trigeminal V") AnnotationAssertion( "trigeminal nerve [V]") AnnotationAssertion( "trigeminal nerve tree") AnnotationAssertion( "trigeminal v nerve") AnnotationAssertion( "uberon") AnnotationAssertion( "CN-V") AnnotationAssertion( "cranial nerve V") AnnotationAssertion(Annotation( "NeuroNames:549") "nerve V") AnnotationAssertion(Annotation( "BTO:0001072") "nervus trigeminus") AnnotationAssertion(Annotation( "BTO:0001072") "trigeminus") AnnotationAssertion( "UBERON:0001645") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "trigeminal nerve") AnnotationAssertion( "Gray778:Trigeminal.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "Wikipedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (abducens nerve) AnnotationAssertion(Annotation( ) Annotation( "ISBN:0471209627") "Cranial nerve that runs to the eye muscles.") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0010471") Annotation( "AAO"^^xsd:string) Annotation( "AAO:EJS"^^xsd:string) "Somatic motor nerve which bifurcates innervating m. rectus lateralis and m. retractor bulbi (eye muscles).[AAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000697") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0030223693 Liem KF, Bemis WE, Walker WF, Grande L, Functional Anatomy of the Vertebrates: An Evolutionary Perspective (2001) p.43, ISBN:978-0072528305 Kardong KV, Vertebrates: Comparative Anatomy, Function, Evolution (2006) p.625") "We conclude this section by listing some of the many synapomorphies of craniates, including (...) (5) cranial nerves (...) (reference 1); Phylogenetically, the cranial nerves are thought to have evolved from dorsal and ventral nerves of a few anterior spinal nerves that became incorporated into the braincase. Dorsal and ventral nerves fuse in the trunk but not in the head, and they produce two series: dorsal cranial nerves (V, VII, IX, and X) and ventral cranial nerves (III, IV, VI, and XIII) (reference 2).[well established][VHOG]") AnnotationAssertion(Annotation( "WP"^^xsd:string) "Homologous abducens nerves are found in all vertebrates except lampreys and hagfishes.[WP] It controls the movement of a single muscle, the lateral rectus muscle of the eye, in humans. In most other mammals it also innervates the musculus retractor bulbi, which can retract the eye for protection") AnnotationAssertion(Annotation( "BIRNLEX:876") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "6n") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010471") AnnotationAssertion( "BAMS:VIn") AnnotationAssertion( "BIRNLEX:876") AnnotationAssertion( "BM:Pons-VIN") AnnotationAssertion( "EHDAA2:0000103") AnnotationAssertion( "EMAPA:18216") AnnotationAssertion( "FMA:50867") AnnotationAssertion( "GAID:824") AnnotationAssertion( "HBA:9325") AnnotationAssertion( "MA:0001087") AnnotationAssertion( "MBA:710") AnnotationAssertion( "MESH:D000010") AnnotationAssertion( "NCIT:C12665") AnnotationAssertion( "OpenCyc:Mx4rvjl41ZwpEbGdrcN5Y29ycA") AnnotationAssertion( "TAO:0000310") AnnotationAssertion(Annotation( "BIRNLEX:876") "UMLS:C0000741") AnnotationAssertion(Annotation( "ncithesaurus:Abducens_Nerve") "UMLS:C0000741") AnnotationAssertion( "VHOG:0000697") AnnotationAssertion( "XAO:0003093") AnnotationAssertion( "ZFA:0000310") AnnotationAssertion(Annotation( "BIRNLEX:876") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=550") AnnotationAssertion( "abducens VI nerve") AnnotationAssertion( "abducens nerve [VI]") AnnotationAssertion( "abducens nerve tree") AnnotationAssertion( "abducent nerve [VI]") AnnotationAssertion( "lateral rectus nerve") AnnotationAssertion( "nervus abducens") AnnotationAssertion(Annotation( "FMA:50867") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "nervus abducens [VI]") AnnotationAssertion( "sixth cranial nerve") AnnotationAssertion( "uberon") AnnotationAssertion( "CN-VI") AnnotationAssertion(Annotation( "BAMS:6n") "abducens nerve/root") AnnotationAssertion( "abducent nerve") AnnotationAssertion(Annotation( "EMAPA:18216") "abducents VI nerve") AnnotationAssertion( "cranial nerve VI") AnnotationAssertion(Annotation( "NeuroNames:550") "nerve VI") AnnotationAssertion(Annotation( ) Annotation( ) "nervus abducens") AnnotationAssertion( "UBERON:0001646") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "abducens nerve") AnnotationAssertion( "Abducens:nerve1.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "Wikipedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (facial nerve) AnnotationAssertion(Annotation( ) Annotation( "ISBN:0471209627") "Cranial nerve that branches into the supraorbital (supplying the skin of the eye region and the lateral line organs here), the palatine (to the roof of the buccal cavity), and the hyomandibular (dividing into the jugular and mental branches).") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0010472") Annotation( "AAO"^^xsd:string) Annotation( "AAO:DSM") "Slender nerve composed of branchiomotor and visceral efferent fibers innervating the mouth and various muscles within the jaw. Sensory components innervate the bucccal roof and somatomotor components innervate the depressor musculature and muscle interhyoideus.[AAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000706") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0030223693 Liem KF, Bemis WE, Walker WF, Grande L, Functional Anatomy of the Vertebrates: An Evolutionary Perspective (2001) p.43, ISBN:978-0072528305 Kardong KV, Vertebrates: Comparative Anatomy, Function, Evolution (2006) p.625") "We conclude this section by listing some of the many synapomorphies of craniates, including (...) (5) cranial nerves (...) (reference 1); Phylogenetically, the cranial nerves are thought to have evolved from dorsal and ventral nerves of a few anterior spinal nerves that became incorporated into the braincase. Dorsal and ventral nerves fuse in the trunk but not in the head, and they produce two series: dorsal cranial nerves (V, VII, IX, and X) and ventral cranial nerves (III, IV, VI, and XIII) (reference 2).[well established][VHOG]") AnnotationAssertion(Annotation( "BIRNLEX:827") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "7n") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010472") AnnotationAssertion( "BAMS:7n") AnnotationAssertion( "BAMS:VIIn") AnnotationAssertion( "BAMS:Viin") AnnotationAssertion( "BAMS:nVII") AnnotationAssertion( "BIRNLEX:827") AnnotationAssertion( "BM:Pons-VIIN") AnnotationAssertion( "EHDAA2:0000489") AnnotationAssertion( "EHDAA:3729") AnnotationAssertion( "EMAPA:17796") AnnotationAssertion( "FMA:50868") AnnotationAssertion( "GAID:719") AnnotationAssertion( "HBA:9328") AnnotationAssertion( "MA:0001091") AnnotationAssertion( "MBA:798") AnnotationAssertion( "MESH:D005154") AnnotationAssertion( "NCIT:C12714") AnnotationAssertion( "OpenCyc:Mx4rvthgEpwpEbGdrcN5Y29ycA") AnnotationAssertion( "TAO:0000664") AnnotationAssertion(Annotation( "BIRNLEX:827") "UMLS:C0015462") AnnotationAssertion(Annotation( "ncithesaurus:Facial_Nerve") "UMLS:C0015462") AnnotationAssertion( "VHOG:0000706") AnnotationAssertion( "XAO:0003094") AnnotationAssertion( "ZFA:0000664") AnnotationAssertion(Annotation( "BIRNLEX:827") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=551") AnnotationAssertion( "branchiomeric cranial nerve") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "face nerve") AnnotationAssertion(Annotation( "EHDAA2:0000489") "facial VII") AnnotationAssertion( "facial VII nerve") AnnotationAssertion( "facial nerve [VII]") AnnotationAssertion( "facial nerve tree") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "nerve of face") AnnotationAssertion(Annotation( "ZFA:0000664") "nervus facialis") AnnotationAssertion(Annotation( "FMA:50868") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "nervus facialis [vii]") AnnotationAssertion( "seventh cranial nerve") AnnotationAssertion( "uberon") AnnotationAssertion( "CN-VII") AnnotationAssertion( "cranial nerve VII") AnnotationAssertion(Annotation( "BAMS:7n") "facial nerve or its root") AnnotationAssertion(Annotation( "BAMS:7n") "facial nerve/root") AnnotationAssertion(Annotation( "NeuroNames:551") "nerve VII") AnnotationAssertion(Annotation( ) Annotation( ) "nervus facialis") AnnotationAssertion( "UBERON:0001647") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "facial nerve") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/1/1f/Cranial_nerve_VII.svg"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "ZFA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "Wikipedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "Wikipedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (vestibulocochlear nerve) AnnotationAssertion(Annotation( ) Annotation( "ISBN:0471209627") "Cranial nerve that transmits sound and equilibrium (balance) information from the inner ear to the brain.") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0010473") Annotation( "AAO"^^xsd:string) Annotation( "AAO:DSM") "Nerve primarily composed of special somatic afferent fibers innervating the inner ear, and is involved in balance, position, and hearing.[AAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000695") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0030223693 Liem KF, Bemis WE, Walker WF, Grande L, Functional Anatomy of the Vertebrates: An Evolutionary Perspective (2001) p.43, ISBN:978-0072528305 Kardong KV, Vertebrates: Comparative Anatomy, Function, Evolution (2006) p.625") "We conclude this section by listing some of the many synapomorphies of craniates, including (...) (5) cranial nerves (...) (reference 1); Phylogenetically, the cranial nerves are thought to have evolved from dorsal and ventral nerves of a few anterior spinal nerves that became incorporated into the braincase. Dorsal and ventral nerves fuse in the trunk but not in the head, and they produce two series: dorsal cranial nerves (V, VII, IX, and X) and ventral cranial nerves (III, IV, VI, and XIII) (reference 2).[well established][VHOG]") AnnotationAssertion(Annotation( "BIRNLEX:890") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "8n") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010473") AnnotationAssertion( "BAMS:8n") AnnotationAssertion( "BAMS:VIIIn") AnnotationAssertion( "BAMS:nVIII") AnnotationAssertion( "BIRNLEX:890") AnnotationAssertion( "BTO:0003490") AnnotationAssertion( "EHDAA2:0002194") AnnotationAssertion( "EMAPA:17801") AnnotationAssertion( "FMA:50869") AnnotationAssertion( "GAID:839") AnnotationAssertion( "HBA:9331") AnnotationAssertion( "MA:0001109") AnnotationAssertion( "MBA:933") AnnotationAssertion( "MESH:D000159") AnnotationAssertion( "NCIT:C12996") AnnotationAssertion( "OpenCyc:Mx4rvVjMFZwpEbGdrcN5Y29ycA") AnnotationAssertion( "TAO:0000247") AnnotationAssertion(Annotation( "BIRNLEX:890") "UMLS:C0001162") AnnotationAssertion(Annotation( "ncithesaurus:Vestibulocochlear_Nerve") "UMLS:C0001162") AnnotationAssertion(Annotation( "BIRNLEX:890") "UMLS:C1278835") AnnotationAssertion( "VHOG:0000695") AnnotationAssertion( "XAO:0003095") AnnotationAssertion( "ZFA:0000247") AnnotationAssertion(Annotation( "BIRNLEX:890") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=553") AnnotationAssertion( "CN-VIII") AnnotationAssertion( "VIII nerve") AnnotationAssertion( "VIIIth cranial nerve") AnnotationAssertion( "acoustic VIII nerve") AnnotationAssertion(Annotation( "FMA:50869") "acoustic nerve") AnnotationAssertion( "acoustic nerve (Crosby)") AnnotationAssertion( "cochlear-vestibular nerve") AnnotationAssertion( "cochleovestibular nerve") AnnotationAssertion( "cranial nerve VIII") AnnotationAssertion( "eighth cranial nerve") AnnotationAssertion(Annotation( "FMA:50869") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "nervus vestibulocochlearis [viii]") AnnotationAssertion( "stato-acoustic nerve") AnnotationAssertion( "vestibulocochlear VIII nerve") AnnotationAssertion( "vestibulocochlear nerve [VIII]") AnnotationAssertion( "vestibulocochlear nerve tree") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:553") Annotation( ) "nervus octavus") AnnotationAssertion(Annotation( "NeuroNames:553") Annotation( ) "nervus statoacusticus") AnnotationAssertion(Annotation( "BTO:0003490") "nervus vestibulocochlearis") AnnotationAssertion( "octaval nerve") AnnotationAssertion( "statoacoustic nerve") AnnotationAssertion( "UBERON:0001648") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "vestibulocochlear nerve") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/7/7d/Gray789.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "ISBN:0471888893"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (glossopharyngeal nerve) AnnotationAssertion(Annotation( ) Annotation( "ISBN:0471209627") "Cranial nerve that branches into the ramus communicans (to the skin), the pretrematic (to the walls of the pharynx and mouth, viscero-sensory fibers), and the larval post-trematic branch (lost in the adult).") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0010474") Annotation( "AAO"^^xsd:string) Annotation( "AAO:EJS"^^xsd:string) "Small nerve consisting of branchiomotor and visceral efferent and afferent fibers which innervate the m. subarculais rectus I, dorsal buccal mucosa, and the tongue.[AAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000701") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0030223693 Liem KF, Bemis WE, Walker WF, Grande L, Functional Anatomy of the Vertebrates: An Evolutionary Perspective (2001) p.43, ISBN:978-0072528305 Kardong KV, Vertebrates: Comparative Anatomy, Function, Evolution (2006) p.625") "We conclude this section by listing some of the many synapomorphies of craniates, including (...) (5) cranial nerves (...) (reference 1); Phylogenetically, the cranial nerves are thought to have evolved from dorsal and ventral nerves of a few anterior spinal nerves that became incorporated into the braincase. Dorsal and ventral nerves fuse in the trunk but not in the head, and they produce two series: dorsal cranial nerves (V, VII, IX, and X) and ventral cranial nerves (III, IV, VI, and XIII) (reference 2).[well established][VHOG]") AnnotationAssertion(Annotation( "BIRNLEX:899") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "9n") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010474") AnnotationAssertion( "BAMS:9n") AnnotationAssertion( "BAMS:IXn") AnnotationAssertion( "BIRNLEX:899") AnnotationAssertion( "BTO:0004979") AnnotationAssertion( "EHDAA2:0000709") AnnotationAssertion( "EHDAA:3733") AnnotationAssertion( "EMAPA:17268") AnnotationAssertion( "FMA:50870") AnnotationAssertion( "GAID:827") AnnotationAssertion( "HBA:9334") AnnotationAssertion( "MA:0001093") AnnotationAssertion( "MBA:808") AnnotationAssertion( "MESH:D005930") AnnotationAssertion( "NCIT:C12723") AnnotationAssertion( "OpenCyc:Mx4rwIr5X5wpEbGdrcN5Y29ycA") AnnotationAssertion( "TAO:0000668") AnnotationAssertion(Annotation( "BIRNLEX:899") "UMLS:C0017679") AnnotationAssertion(Annotation( "ncithesaurus:Glossopharyngeal_Nerve") "UMLS:C0017679") AnnotationAssertion(Annotation( "BIRNLEX:899") "UMLS:C1305752") AnnotationAssertion( "VHOG:0000701") AnnotationAssertion( "XAO:0003096") AnnotationAssertion( "ZFA:0000668") AnnotationAssertion(Annotation( "BIRNLEX:899") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=701") AnnotationAssertion(Annotation( "EHDAA2:0000709") "glossopharyngeal IX") AnnotationAssertion( "glossopharyngeal IX nerve") AnnotationAssertion( "glossopharyngeal nerve [IX]") AnnotationAssertion( "glossopharyngeal nerve tree") AnnotationAssertion(Annotation( "ZFA:0000668") "nervus glossopharyngeus") AnnotationAssertion(Annotation( "FMA:50870") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "nervus glossopharyngeus [ix]") AnnotationAssertion( "ninth cranial nerve") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "CN-IX") AnnotationAssertion( "cranial nerve IX") AnnotationAssertion(Annotation( "NeuroNames:701") "nerve IX") AnnotationAssertion(Annotation( ) Annotation( ) "nervus glossopharyngeus") AnnotationAssertion( "UBERON:0001649") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "glossopharyngeal nerve") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/5/5e/Gray791.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "motor") Annotation( "Wikipedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (hypoglossal nerve) AnnotationAssertion(Annotation( ) Annotation( "ISBN:080184780X") Annotation( "VHOG:0000693") "Cranial nerve that innervates the muscles of the tongue.") AnnotationAssertion( ) AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000693") Annotation( "VHOG"^^xsd:string) Annotation( ) "Cranial nerve that innervates muscles in the tongue. [Bemis_WE, Functional_Anatomy_of_the_Vertebrates:_An_Evolutionary_Perspective, Glossary_G-14, Grande_L, Liem_KF, Third_Edition_(2001)_Orlando_Fla.:_Harcourt_College_Publishers, Walker_WF][VHOG]") AnnotationAssertion(Annotation( "ISBN:080184780X") "In amphibians, represents the hypoglossal nerve in amniotes. Innverates mm. geniohyoideus, genioglossus, hyoglossus, rectus cervicis") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0010477") Annotation( "AAO"^^xsd:string) Annotation( "AAO:EJS"^^xsd:string) "Nerve which innervates the muscles associated with the tongue including mm geniohyoideus, genioglossus, hyoglossus and rectus cervicis.[AAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000693") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( ) "Cranial nerves XI and XII evolved in the common ancestor to amniotes (non-amphibian tetrapods) thus totalling twelve pairs.[well established][VHOG]") AnnotationAssertion( "we use a broad definition of this cranial nerve that encompasses the amphibian predecessor of true amniote hypoglossal nerves") AnnotationAssertion(Annotation( "BIRNLEX:820") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "12n") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010477") AnnotationAssertion( "BAMS:12n") AnnotationAssertion( "BAMS:XIIn") AnnotationAssertion( "BAMS:nXII") AnnotationAssertion( "BIRNLEX:820") AnnotationAssertion( "BTO:0003386") AnnotationAssertion( "EHDAA2:0000798") AnnotationAssertion( "EHDAA:2859") AnnotationAssertion( "EMAPA:17269") AnnotationAssertion( "FMA:50871") AnnotationAssertion( "GAID:828") AnnotationAssertion( "HBA:9343") AnnotationAssertion( "MA:0001094") AnnotationAssertion( "MBA:813") AnnotationAssertion( "MESH:D007002") AnnotationAssertion( "NCIT:C12732") AnnotationAssertion( "OpenCyc:Mx4rv9eWA5wpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "BIRNLEX:820") "UMLS:C0020614") AnnotationAssertion(Annotation( "ncithesaurus:Hypoglossal_Nerve") "UMLS:C0020614") AnnotationAssertion( "VHOG:0000693") AnnotationAssertion( "XAO:0004215") AnnotationAssertion(Annotation( "BIRNLEX:820") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=704") AnnotationAssertion(Annotation( "BIRNLEX:820") "cranial nerve XII") AnnotationAssertion(Annotation( "EHDAA2:0000798") "hypoglossal XII") AnnotationAssertion( "hypoglossal XII nerve") AnnotationAssertion( "hypoglossal nerve [XII]") AnnotationAssertion( "hypoglossal nerve tree") AnnotationAssertion(Annotation( "FMA:50871") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "nervus hypoglossus [xii]") AnnotationAssertion( "twelfth cranial nerve") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "VHOG:0000693") "CN-XII") AnnotationAssertion(Annotation( "BAMS:12n") "hypoglossal nerve/ root") AnnotationAssertion(Annotation( "NeuroNames:704") "nerve XII") AnnotationAssertion(Annotation( "NeuroNames:704") Annotation( ) "nervi hypoglossalis") AnnotationAssertion(Annotation( ) Annotation( ) "nervus hypoglossus") AnnotationAssertion( "UBERON:0001650") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "hypoglossal nerve") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/e/ef/Gray794.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (right pulmonary artery) AnnotationAssertion(Annotation( "UBERON:cjm"^^xsd:string) "The pulmonary artery that supplies the right lung.") AnnotationAssertion( "TODO - add class 'pulmonary artery tree organ'") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37378") AnnotationAssertion( "FMA:50872") AnnotationAssertion( "MA:0002500") AnnotationAssertion( "NCIT:C33489") AnnotationAssertion(Annotation( "ncithesaurus:Right_Pulmonary_Artery") "UMLS:C0923924") AnnotationAssertion( "galen:RightPulmonaryArtery") AnnotationAssertion( "right main pulmonary artery") AnnotationAssertion( "right pulmonary arterial tree") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "arteria pulmonalis dextra") AnnotationAssertion( "UBERON:0001651") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "right pulmonary artery") AnnotationAssertion( "Alveoli:diagram.png"^^xsd:anyURI) AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/f/f6/Gray504.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (left pulmonary artery) AnnotationAssertion(Annotation( "UBERON:cjm"^^xsd:string) "The pulmonary artery that supplies the left lung.") AnnotationAssertion( "TODO - add class 'pulmonary artery tree organ'") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37097") AnnotationAssertion( "FMA:50873") AnnotationAssertion( "MA:0002032") AnnotationAssertion( "NCIT:C32971") AnnotationAssertion(Annotation( "ncithesaurus:Left_Pulmonary_Artery") "UMLS:C0923925") AnnotationAssertion( "galen:LeftPulmonaryArtery") AnnotationAssertion( "left main pulmonary artery") AnnotationAssertion( "left pulmonary arterial tree") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "arteria pulmonalis sinistra") AnnotationAssertion( "UBERON:0001652") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "left pulmonary artery") AnnotationAssertion( "Alveoli:diagram.png"^^xsd:anyURI) AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/f/f6/Gray504.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (facial vein) AnnotationAssertion(Annotation( ) "The anterior facial vein (facial vein) commences at the side of the root of the nose, and is a direct continuation of the angular vein where it also receives a small nasal branch. It lies behind the facial artery and follows a less tortuous course. It receives blood from the external palatine vein before it either joins the anterior branch of the retromandibular vein to form the common facial vein, or drains directly into the internal jugular vein. [WP,unvetted].") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0010513") Annotation( "AAO"^^xsd:string) Annotation( "AAO:BJB"^^xsd:string) "Vein which collects blood from muscles of the head and drains into the external jugular vein.[AAO]") AnnotationAssertion(Annotation( "MA"^^xsd:string) "MA and NCITA also has 'anterior facial vein'") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010513") AnnotationAssertion( "EMAPA:19220") AnnotationAssertion( "FMA:50874") AnnotationAssertion( "MA:0002115") AnnotationAssertion( "NCIT:C32579") AnnotationAssertion( "OpenCyc:Mx4rvziz3JwpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Facial_Vein") "UMLS:C0226532") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "face vein") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "vein of face") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "anterior facial vein") AnnotationAssertion(Annotation( ) Annotation( ) "vena facialis anterior") AnnotationAssertion( "UBERON:0001653") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "facial vein") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/8/8c/Gray557.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (supraorbital vein) AnnotationAssertion(Annotation( ) "The supraorbital vein begins on the forehead where it communicates with the frontal branch of the superficial temporal vein. It runs downward superficial to the Frontalis muscle, and joins the frontal vein at the medial angle of the orbit to form the angular vein. Previous to its junction with the frontal vein, it sends through the supraorbital notch into the orbit a branch which communicates with the ophthalmic vein; as this vessel passes through the notch, it receives the frontal diploic vein through a foramen at the bottom of the notch. The areas drained by this vessel are the forehead, eyebrow and upper eyelid. [WP,unvetted].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37195") AnnotationAssertion( "FMA:50904") AnnotationAssertion( "MA:0002228") AnnotationAssertion( "NCIT:C33707") AnnotationAssertion(Annotation( "ncithesaurus:Supra-orbital_Vein") "UMLS:C0226535") AnnotationAssertion(Annotation( "FMA:50904") "supra-orbital vein") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001654") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "supraorbital vein") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/8/8c/Gray557.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (submental vein) AnnotationAssertion(Annotation( "ncithesaurus:Submental_Vein") "A vein in the chin that is connected to the sublingual and anterior jugular veins and drains into the facial vein.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37188") AnnotationAssertion( "FMA:50925") AnnotationAssertion( "MA:0002223") AnnotationAssertion( "NCIT:C53128") AnnotationAssertion(Annotation( "ncithesaurus:Submental_Vein") "UMLS:C0226541") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001655") AnnotationAssertion(rdfs:label "submental vein") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA/obol"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (retromandibular vein) AnnotationAssertion(Annotation( ) "The retromandibular vein (temporomaxillary vein, posterior facial vein), formed by the union of the superficial temporal and maxillary veins, descends in the substance of the parotid gland, superficial to the external carotid artery but beneath the facial nerve, between the ramus of the mandible and the sternocleidomastoideus muscle. It divides into two branches: an anterior, which passes forward and unites with the anterior facial vein to form the common facial vein. a posterior, which is joined by the posterior auricular vein and becomes the external jugular vein. [WP,unvetted].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37182") AnnotationAssertion( "FMA:50928") AnnotationAssertion( "MA:0002117") AnnotationAssertion( "NCIT:C33746") AnnotationAssertion( "OpenCyc:Mx4rv0bn95wpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Temporo-maxillary_Vein") "UMLS:C0226520") AnnotationAssertion( "posterior facial vein") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "vena facialis posterior") AnnotationAssertion(Annotation( ) Annotation( ) "vena retromandibularis") AnnotationAssertion( "UBERON:0001656") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "retromandibular vein") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/8/8c/Gray557.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) DisjointClasses(Annotation( "lexical"^^xsd:string) ) # Class: (superficial temporal vein) AnnotationAssertion(Annotation( ) "The superficial temporal vein is a vein of the side of the head. [WP,unvetted].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0003748") AnnotationAssertion( "EMAPA:19315") AnnotationAssertion( "FMA:50932") AnnotationAssertion( "MA:0002242") AnnotationAssertion( "NCIT:C52700") AnnotationAssertion( "OpenCyc:Mx4rvmANWZwpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Superficial_Temporal_Vein") "UMLS:C0226521") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "venae temporales superficiales") AnnotationAssertion( "UBERON:0001657") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "superficial temporal vein") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/8/8c/Gray557.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA"^^xsd:string) Annotation( "Wikipedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (middle temporal vein) AnnotationAssertion(Annotation( ) "A temporal vein that arises near the lateral angle of the eye; joins the superficial temporal veins to form the retromandibular vein.") AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37176") AnnotationAssertion( "FMA:50935") AnnotationAssertion( "MA:0002241") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001658") AnnotationAssertion(rdfs:label "middle temporal vein") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA"^^xsd:string) Annotation( "TFD") ObjectSomeValuesFrom( )) # Class: (transverse facial vein) AnnotationAssertion(Annotation( ) "A tributary of the superficial temporal or retromandibular veins, anastomosing with the facial vein.") AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37200") AnnotationAssertion( "FMA:50938") AnnotationAssertion( "MA:0002247") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001659") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "transverse facial vein") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/8/8c/Gray557.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (maxillary vein) AnnotationAssertion(Annotation( ) "A vein that consists of a short trunk which accompanies the first part of the internal maxillary artery. It is formed by a confluence of the veins of the pterygoid plexus, and passes backward between the sphenomandibular ligament and the neck of the mandible, and unites with the superficial temporal vein to form the retromandibular vein. [WP,unvetted].") AnnotationAssertion( "in horses, a branch of the external jugular gives off the occipital and caudal auricular vein") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37169") AnnotationAssertion( "FMA:50941") AnnotationAssertion( "MA:0002169") AnnotationAssertion( "NCIT:C32855") AnnotationAssertion( "OpenCyc:Mx4rvlDSc5wpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Internal_Maxillary_Vein") "UMLS:C0226524") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001660") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "maxillary vein") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/8/8c/Gray557.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (deep temporal vein) AnnotationAssertion(Annotation( "ncithesaurus:Deep_Temporal_Vein") "The blood vessels at the vertex and on either side of the head that drain deoxygenated blood into the pterygoid venous plexus.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37512") AnnotationAssertion( "FMA:50954") AnnotationAssertion( "MA:0002240") AnnotationAssertion( "NCIT:C52699") AnnotationAssertion(Annotation( "ncithesaurus:Deep_Temporal_Vein") "UMLS:C0226526") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001661") AnnotationAssertion(rdfs:label "deep temporal vein") SubClassOf( ) SubClassOf( ) # Class: (anterior auricular vein) AnnotationAssertion(Annotation( ) "The anterior auricular veins are veins which drain the anterior aspect of the external ear. [WP,unvetted].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37132") AnnotationAssertion( "FMA:50956") AnnotationAssertion( "MA:0002083") AnnotationAssertion( "MA:0002214") AnnotationAssertion( "NCIT:C53027") AnnotationAssertion(Annotation( "ncithesaurus:Anterior_Auricular_Vein") "UMLS:C0226527") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "venae auriculares anteriores") AnnotationAssertion( "UBERON:0001662") AnnotationAssertion(rdfs:label "anterior auricular vein") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/8/8c/Gray557.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) DisjointClasses(Annotation( "lexical"^^xsd:string) ) # Class: (cerebral vein) AnnotationAssertion(Annotation( ) "The cerebral veins are divisible into external and internal groups according to the outer surfaces or the inner parts of the hemispheres they drain into. The external veins are the superior cerebral veins, inferior cerebral veins, and middle cerebral vein. [WP,unvetted].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37140") AnnotationAssertion( "FMA:50981") AnnotationAssertion( "GAID:530") AnnotationAssertion( "MA:0002096") AnnotationAssertion( "MESH:D002550") AnnotationAssertion( "NCIT:C53037") AnnotationAssertion(Annotation( "ncithesaurus:Cerebral_Vein") "UMLS:C0007797") AnnotationAssertion( "XAO:0004160") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "venae cerebri") AnnotationAssertion(Annotation( ) Annotation( ) "venae encephali") AnnotationAssertion( "UBERON:0001663") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "cerebral vein") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/9/9f/Gray568.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (inferior cerebral vein) AnnotationAssertion(Annotation( ) "The inferior cerebral veins, of small size, drain the under surfaces of the hemispheres. Those on the orbital surface of the frontal lobe join the superior cerebral veins, and through these open into the superior sagittal sinus. Those of the temporal lobe anastomose with the middle cerebral and basal veins, and join the cavernous, sphenoparietal, and superior petrosal sinuses. [WP,unvetted].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37154") AnnotationAssertion( "FMA:50986") AnnotationAssertion( "MA:0002097") AnnotationAssertion( "uberon") AnnotationAssertion( "small cerebral vein") AnnotationAssertion( "UBERON:0001664") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "inferior cerebral vein") SubClassOf( ) # Class: (triceps surae) AnnotationAssertion(Annotation( ) "The triceps surae is a pair of muscles located at the calf - the gastrocnemius and the soleus. These muscles both insert into the calcaneus, the bone of the heel of the human foot, and form the major part of the muscle of the back part of the lower leg, commonly known as the calf muscle. The triceps surae is connected to the foot through the Achilles tendon, and has 3 heads deriving from the 2 major masses of muscle. The superficial portion (the gastrocnemius) gives off 2 heads attaching to the base of the femur directly above the knee. The deep (profundis) mass of muscle (the soleus) forms the remaining head which attaches to the superior posterior area of the tibia. The triceps surae is innervated by the tibial nerve, specifically, nerve roots L5-S2. [WP,unvetted].") AnnotationAssertion(Annotation( "FMA"^^xsd:string) "A set of muscles in FMA, a single organ in MA") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:36267") AnnotationAssertion( "FMA:51062") AnnotationAssertion( "MA:0002400") AnnotationAssertion( "NCIT:C53181") AnnotationAssertion(Annotation( "ncithesaurus:Triceps_Surae") "UMLS:C0224458") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "calf muscle") AnnotationAssertion(Annotation( ) "gastrosoleus") AnnotationAssertion(Annotation( ) "gastrosoleus complex") AnnotationAssertion(Annotation( ) Annotation( ) "musculus triceps surae") AnnotationAssertion( "sural triceps") AnnotationAssertion( "UBERON:0001665") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "triceps surae") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/5/57/Illu_lower_extremity_muscles.jpg"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (flexor digitorum longus) AnnotationAssertion(Annotation( ) "The Flexor digitorum longus is situated on the tibial side of the leg. At its origin it is thin and pointed, but it gradually increases in size as it descends. This muscle serves to curl the second, third, fourth, and fifth toes (flexion of phalanges II-V). [WP,unvetted].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0000466") AnnotationAssertion( "EMAPA:36248") AnnotationAssertion( "FMA:51071") AnnotationAssertion( "MA:0002299") AnnotationAssertion( "NCIT:C52921") AnnotationAssertion(Annotation( "ncithesaurus:Flexor_Digitorum_Longus") "UMLS:C1261048") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001666") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "flexor digitorum longus") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/9/92/Gray442.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (tibialis posterior) AnnotationAssertion(Annotation( ) "The Tibialis posterior is the most central of all the leg muscles, and is located in the posterior compartment of the leg. It is the key stabilizing muscle of the lower leg. [WP,unvetted].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0000867") AnnotationAssertion( "EMAPA:36255") AnnotationAssertion( "FMA:51099") AnnotationAssertion( "MA:0002394") AnnotationAssertion( "NCIT:C53078") AnnotationAssertion(Annotation( "ncithesaurus:Tibialis_Caudalis") "UMLS:C1711425") AnnotationAssertion( "tibialis caudalis") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0000867") "ibialis posticus") AnnotationAssertion(Annotation( ) Annotation( ) "musculus tibialis posterior") AnnotationAssertion(Annotation( "BTO:0000867") "posterior tibialis") AnnotationAssertion(Annotation( "BTO:0000867") "tibialis posterior muscle") AnnotationAssertion( "UBERON:0001667") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "tibialis posterior") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/9/92/Gray442.png"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (cerebellar vein) AnnotationAssertion(Annotation( ) "A vein that drains the cerebellum.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37139") AnnotationAssertion( "FMA:51227") AnnotationAssertion( "MA:0002093") AnnotationAssertion( "NCIT:C53032") AnnotationAssertion(Annotation( "ncithesaurus:Cerebellar_Vein") "UMLS:C0226601") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "cerebellum vein") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epencephalon-1 vein") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "vein of cerebellum") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "vein of epencephalon-1") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001668") AnnotationAssertion(rdfs:label "cerebellar vein") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (superior cerebellar vein) AnnotationAssertion(Annotation( ) "The superior cerebellar veins pass partly forward and medialward, across the superior vermis, to end in the straight sinus and the internal cerebral veins, partly lateralward to the transverse and superior petrosal sinuses. [WP,unvetted].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37191") AnnotationAssertion( "FMA:51232") AnnotationAssertion( "MA:0002095") AnnotationAssertion( "vein of superior cerebellar hemisphere") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001669") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "superior cerebellar vein") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/9/97/Gray704.png"^^xsd:anyURI) SubClassOf( ) # Class: (inferior cerebellar vein) AnnotationAssertion(Annotation( ) "The inferior cerebellar veins are of large size, end in the transverse, superior petrosal, and occipital sinuses. [WP,unvetted].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37153") AnnotationAssertion( "FMA:51233") AnnotationAssertion( "MA:0002094") AnnotationAssertion( "inferior vein of cerebellar hemisphere") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001670") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "inferior cerebellar vein") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/9/97/Gray704.png"^^xsd:anyURI) SubClassOf( ) # Class: (temporal vein) AnnotationAssertion(Annotation( ) "Any of the veins draining the temporal region.") AnnotationAssertion(Annotation( "ncithesaurus:Temporal_Vein") "A vein in front of the ear that drains the head and face and joins with the internal maxillary vein to form the temporo-maxillary vein.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37196") AnnotationAssertion( "FMA:51302") AnnotationAssertion( "MA:0002239") AnnotationAssertion( "NCIT:C53140") AnnotationAssertion(Annotation( "ncithesaurus:Temporal_Vein") "UMLS:C0924206") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001671") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "temporal vein") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/8/8c/Gray557.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (anterior cerebral vein) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:36467") AnnotationAssertion( "FMA:51306") AnnotationAssertion( "TAO:0001067") AnnotationAssertion( "XAO:0004158") AnnotationAssertion( "ZFA:0001067") AnnotationAssertion( "uberon") AnnotationAssertion( "ACeV") AnnotationAssertion( "rostral cerebral vein") AnnotationAssertion( "UBERON:0001672") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "anterior cerebral vein") SubClassOf( ) DisjointClasses(Annotation( "lexical"^^xsd:string) ) # Class: (central retinal vein) AnnotationAssertion(Annotation( ) "The central retinal vein (retinal vein) is a short vein that runs through the optic nerve and drains blood from the capillaries of the retina into the larger veins outside the eye. The anatomy of the veins of the orbit of the eye varies between individuals, and in some the central retinal vein drains into the superior ophthalmic vein, and in some it drains directly into the cavernous sinus. [WP,unvetted].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EFO:0004271") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37185") AnnotationAssertion( "FMA:51799") AnnotationAssertion( "GAID:524") AnnotationAssertion( "MA:0002213") AnnotationAssertion( "MESH:D012169") AnnotationAssertion( "NCIT:C53063") AnnotationAssertion(Annotation( "ncithesaurus:Retinal_Vein") "UMLS:C0035327") AnnotationAssertion(Annotation( "MA:0002213") "retinal vein") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "vena centralis retinae") AnnotationAssertion( "UBERON:0001673") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "central retinal vein") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "proximal portion") Annotation( "ISBN:0781772214") ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA/obol"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (masseteric vein) AnnotationAssertion(Annotation( ) "A plexiform vein accompanying the masseteric artery that empty into the pterygoid venous plexus.") AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37168") AnnotationAssertion( "FMA:52519") AnnotationAssertion( "MA:0002167") AnnotationAssertion( "NCIT:C53051") AnnotationAssertion(Annotation( "ncithesaurus:Masseteric_Vein") "UMLS:C0925179") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "masseteric veins") AnnotationAssertion( "UBERON:0001674") AnnotationAssertion(rdfs:label "masseteric vein") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (trigeminal ganglion) AnnotationAssertion(Annotation( ) Annotation( ) Annotation( ) "The cranial ganglion that is associated with and extends fibers into the trigeminal nerve.") AnnotationAssertion( "consider renaming this 'trigeminal ganglion complex'. The complex may be fused (amniotes) partially fused (xenopus) or separate (sharks)") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0000295") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "A prominent collection of touch-sensory neurons of the trigeminal or fifth cranial nerve, positioned beside the brain between the eye and the ear. Kimmel et al, 1995.[TAO]") AnnotationAssertion(Annotation( ) Annotation( "XAO:0004093") "In Xenopus, the profundal and the trigeminal ganglia are separate distally but fused at their proximal end as they condense around NF stage 24.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0011107") AnnotationAssertion( "BAMS:5Gn") AnnotationAssertion( "BAMS:GV") AnnotationAssertion( "BTO:0001231") AnnotationAssertion( "EFO:0000903") AnnotationAssertion( "EHDAA2:0002085") AnnotationAssertion( "EHDAA:2113") AnnotationAssertion( "EMAPA:16797") AnnotationAssertion( "FMA:52618") AnnotationAssertion( "GAID:725") AnnotationAssertion( "MA:0001080") AnnotationAssertion( "MAT:0000511") AnnotationAssertion( "MESH:D012668") AnnotationAssertion( "NCIT:C62642") AnnotationAssertion( "TAO:0000295") AnnotationAssertion(Annotation( "ncithesaurus:Trigeminal_Ganglion") "UMLS:C0040995") AnnotationAssertion( "VHOG:0000694") AnnotationAssertion( "XAO:0000427") AnnotationAssertion( "XAO:0000428") AnnotationAssertion( "ZFA:0000295") AnnotationAssertion(Annotation( "ZFA:0000295") "5th ganglion") AnnotationAssertion(Annotation( ) "Gasserian ganglion") AnnotationAssertion(Annotation( "ZFA:0000295") "fifth ganglion") AnnotationAssertion(Annotation( ) "ganglion of trigeminal complex") AnnotationAssertion(Annotation( "ISBN:0471888893"^^xsd:string) "semilunar ganglion") AnnotationAssertion(Annotation( "MA:0001080") "trigeminal V ganglion") AnnotationAssertion(Annotation( "NCBITaxon:32524") Annotation( ) "fused trigeminal ganglion") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0001231") "Gasser's ganglion") AnnotationAssertion(Annotation( ) Annotation( ) "Gasserian ganglia") AnnotationAssertion( "gV") AnnotationAssertion(Annotation( "BTO:0001231") "ganglion of trigeminal nerve") AnnotationAssertion(Annotation( ) Annotation( ) "ganglion semilunare") AnnotationAssertion(Annotation( ) Annotation( ) "ganglion trigeminale") AnnotationAssertion(Annotation( "BTO:0001231") "ganglion trigeminale") AnnotationAssertion(Annotation( ) "trigeminal ganglia") AnnotationAssertion( "trigeminus ganglion") AnnotationAssertion( "UBERON:0001675") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "trigeminal ganglion") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/6/69/Gray776.png"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "ncithesaurus"^^xsd:string) ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "Bgee:AN"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (occipital bone) AnnotationAssertion(Annotation( "ISBN:0-683-40008-8"^^xsd:string) Annotation( "MP:0005269") "The bone at the lower, posterior part of the skull.") AnnotationAssertion(Annotation( ) "formed from the sclerotome of the occipital somites. It is not present in living or fossil agnathans or cartilaginous fishes, but appears to have arisen in parallel in many bony fishes. Incorporation of the occipital ver- tebrae into the skull was associated with the annexation of the upper part of the spinal cord into the brain, together with the first 2 spinal nerves as cranial nerves XI and XII") AnnotationAssertion(Annotation( "Kardong") "fusion of basi-, exo- and supra-occipitals (and maybe tabular)") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:25112") AnnotationAssertion( "FMA:52735") AnnotationAssertion( "GAID:227") AnnotationAssertion( "MA:0001468") AnnotationAssertion( "MESH:D009777") AnnotationAssertion( "NCIT:C12757") AnnotationAssertion( "OpenCyc:Mx4rwQtsiZwpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Occipital_Bone") "UMLS:C0028784") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "occipital complex") AnnotationAssertion( "occipital squama") AnnotationAssertion(Annotation( ) Annotation( ) "os occipitale") AnnotationAssertion( "UBERON:0001676") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "occipital bone") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/2/27/Gray194.png"^^xsd:anyURI) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "basi paired exo and supra occipital bones") Annotation( "MA-modified"^^xsd:string) ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) SubClassOf(Annotation( "interparietal (postparietal)") ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (sphenoid bone) AnnotationAssertion(Annotation( ) "An unpaired bone situated at the base of the skull in front of the temporal bone and basilar part of the occipital bone. The sphenoid bone is one of the seven bones that articulate to form the orbit. Its shape somewhat resembles that of a butterfly or bat with its wings extended.") AnnotationAssertion(Annotation( "FMA"^^xsd:string) "part of viscerocranium (facial skeleton) in FMA") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "CALOHA:TS-2343") AnnotationAssertion( "EMAPA:18340") AnnotationAssertion( "FMA:52736") AnnotationAssertion( "GAID:230") AnnotationAssertion( "MA:0001472") AnnotationAssertion( "MESH:D013100") AnnotationAssertion( "NCIT:C12790") AnnotationAssertion( "OpenCyc:Mx4rwAU9XpwpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Sphenoid_Bone") "UMLS:C0037884") AnnotationAssertion(Annotation( "FMA:52736") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "os sphenoidale") AnnotationAssertion( "sphenoid") AnnotationAssertion( "sphenoidal bone") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "butterfly bone") AnnotationAssertion(Annotation( ) "os sphenoidale") AnnotationAssertion(Annotation( ) Annotation( ) "os sphenoidale") AnnotationAssertion(Annotation( ) "os sphenoidum") AnnotationAssertion( "sphenoid complex") AnnotationAssertion( "UBERON:0001677") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "sphenoid bone") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/6/66/Illu_cranial_bones2.jpg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ) SubClassOf(Annotation( "orbito pre and basi sphenoid") ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) SubClassOf(Annotation( "pterygoid process") ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) SubClassOf(Annotation( "alisphenoid") ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) SubClassOf(Annotation( "cjm"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (temporal bone) AnnotationAssertion(Annotation( "ISBN:0-683-40008-8"^^xsd:string) Annotation( "MP:0005272") "The large, irregular bone located at the base and side of the skull; consists of three parts at birth: squamous, tympanic, and petrous.") AnnotationAssertion( "In many mammals, as in humans, the petrosal, ectotympanic and squamosal bones synostose to form the temporal bone + styloid process") AnnotationAssertion(Annotation( "chond.") "fusion of squamosal + angular (tympanic annulus) [derm.] + petrosal (prootic + opisthotic)") AnnotationAssertion(Annotation( "[WP]") "The temporal bone consists of four parts: * Squama temporalis * Mastoid portion * Petrous portion (Petrosal ridge) * Tympanic part[WP].") AnnotationAssertion(Annotation( "FMA"^^xsd:string) "Note the Temporal bone is not explicitly categorized to a part of the cranium in FMA") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EHDAA:6035") AnnotationAssertion( "EMAPA:17682") AnnotationAssertion( "FMA:52737") AnnotationAssertion( "GAID:232") AnnotationAssertion( "MA:0001476") AnnotationAssertion( "MESH:D013701") AnnotationAssertion( "NCIT:C12797") AnnotationAssertion( "OpenCyc:Mx4rvbkAk5wpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Temporal_Bone") "UMLS:C0039484") AnnotationAssertion( "VHOG:0000800") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "os temporale") AnnotationAssertion( "UBERON:0001678") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "temporal bone") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/6/66/Illu_cranial_bones2.jpg"^^xsd:anyURI) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ) SubClassOf(Annotation( "petrosal") ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) SubClassOf(Annotation( "squamosal plus angular") Annotation( "temporal series") ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) SubClassOf(Annotation( "styloid process") ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) # Class: (ethmoid bone) AnnotationAssertion(Annotation( ) "A bone in the skull that separates the nasal cavity from the brain. As such, it is located at the roof of the nose, between the two orbits. The cubical bone is lightweight due to a spongy construction. The ethmoid bone is one of the bones that makes up the orbit of the eye[WP].") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001317") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( ) "A light spongy bone located between the eye sockets, forming part of the walls and septum of the superior nasal cavity, and containing perforations for the passage of olfactory nerve fibers. [TFD][VHOG]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001317") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0030223693 Liem KF, Bemis WE, Walker WF, Grande L, Functional Anatomy of the Vertebrates: An Evolutionary Perspective (2001) p.259") "The ethmoid region of the chondrocranium and the nasal capsules, which were largely unossified in early tetrapods and ancestral amniotes, are represented in mammals by the ethmoid and turbinates bones, respectively.[well established][VHOG]") AnnotationAssertion( "ethmoidal") AnnotationAssertion( "todo - homology e.g. mesethmoid of teleost") AnnotationAssertion(Annotation( "MA"^^xsd:string) "Note the WP states the Neurocranium contains the ethmoid bone, both MA and FMA place the ethmoid as part of the viscerocranium. FMA also has it in neurocranium (via basicranium). Ideally we would have non-overlapping divisions of the skull, but for now we follow FMA") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0004140") AnnotationAssertion( "EMAPA:19018") AnnotationAssertion( "FMA:52740") AnnotationAssertion( "GAID:212") AnnotationAssertion( "MA:0001483") AnnotationAssertion( "MESH:D005004") AnnotationAssertion( "NCIT:C12711") AnnotationAssertion( "OpenCyc:Mx4rvuUPh5wpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Ethmoid_Bone") "UMLS:C0015027") AnnotationAssertion( "VHOG:0001317") AnnotationAssertion(Annotation( "FMA:52740") "ethmoid") AnnotationAssertion(Annotation( "MP:0000101") "ethmoidal bone") AnnotationAssertion(Annotation( ) "os ethmoidale") AnnotationAssertion(Annotation( "FMA:52740") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "os ethmoidale") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001679") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "ethmoid bone") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/6/66/Illu_cranial_bones2.jpg"^^xsd:anyURI) SubClassOf(Annotation( "ISBN:0073040584"^^xsd:string) ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "definitional"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lacrimal bone) AnnotationAssertion(Annotation( "ISBN:0-683-40008-8"^^xsd:string) Annotation( "MP:0005271") "The irregularly thin plate that forms part of the medial wall of the orbit behind the frontal process of the maxilla.") AnnotationAssertion(Annotation( "Wikipedia"^^xsd:string) ) AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001149") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-3899370805 Arratia G, Schultze HP, Wilson MVH, Mesozoic Fishes 4 - Homology and Phylogeny (2008) p.23-48") "The infraorbital bone 1 of actinopterygians is homologous with the lacrimal bone (...).[well established][VHOG]") AnnotationAssertion( "In early lobe-finned fishes and ancestral tetrapods, the lacrimal bone is a relatively large and robust bone, running from the orbit to the nostrils. It forms part of the side of the face, between the nasal bones and the maxilla. In primitive forms, it is often accompanied by a much smaller septomaxilla bone, lying immediately behind the nasal opening, but this is lost in most modern species. The lacrimal bone is often smaller in living vertebrates, and is no longer always directly associated with the nasal opening, although it retains its connection with the orbit. The bone is entirely absent in living amphibians, as well as some reptilian species[ISBN 0-03-910284-X]") AnnotationAssertion( "lacrimal") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:52741") AnnotationAssertion( "MA:0001486") AnnotationAssertion( "NCIT:C32906") AnnotationAssertion(Annotation( "ncithesaurus:Lacrimal_Bone") "UMLS:C0222733") AnnotationAssertion( "VHOG:0001149") AnnotationAssertion( "lachrymal bone") AnnotationAssertion( "lacrymal bone") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "TODO:TODO") Annotation( "VHOG:0001149") Annotation( "ZFA:0000223") Annotation( ) "infraorbital 1") AnnotationAssertion(Annotation( "VHOG:0001149") "lachrymal bone - infraorbital 1") AnnotationAssertion(Annotation( "VHOG:0001149") "lacrimal - infraorbital 1") AnnotationAssertion(Annotation( "VHOG:0001149") "lacrymal bone - infraorbital 1") AnnotationAssertion(Annotation( ) Annotation( ) "os lacrimale") AnnotationAssertion( "UBERON:0001680") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "lacrimal bone") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/2/2d/Gray164.png"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "orbital series"^^xsd:string) Annotation( "ISBN:0073040584"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "ZFA-modified"^^xsd:string) ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) SubClassOf(Annotation( "FMA-abduced-lr"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (nasal bone) AnnotationAssertion(Annotation( ) Annotation( ) Annotation( "ZFIN:curator"^^xsd:string) "One of two small oblong bones, varying in size and form in different individuals; they are placed side by side at the middle and upper part of the face, and form, by their junction, 'the bridge' of the nose[WP]. Paired dermal bones, likened to a bone tube, positioned lateral to the supraethmoid. Nasal bones are transversed by the anterior most part of the supraorbital canals and bear one neuromast foramen in zebrafish[ZFA].") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0000312") Annotation( "AAO"^^xsd:string) Annotation( "AAO:LAP"^^xsd:string) "Paired bone of intramembranous origin that roofs the olfactory capsule.[AAO]") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0000365") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "Paired dermal bones, likened to a bone tube, positioned lateral to the supraethmoid. Nasal bones are transversed by the anterior most part of the supraorbital canals and bear one neuromast foramen in zebrafish Cubbage and Mabee, 1996.[TAO]") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0000365") Annotation( "TAO"^^xsd:string) "relationship loss: overlaps mesethmoid-nasal joint (TAO:0001677)[TAO]") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0000312") Annotation( "AAO"^^xsd:string) "relationship loss: part_of braincase and otic capsule skeleton (AAO:0000052)[AAO]") AnnotationAssertion(Annotation( "2012-09-06"^^xsd:string) Annotation( "TAO:0000365") Annotation( "TAO"^^xsd:string) Annotation( "Curator"^^xsd:string) "Synonym adnasal used in Weitzman 1960, and synonym discussed in Vari 1995.[TAO]") AnnotationAssertion( "In primitive bony fish and tetrapods, the nasal bones are the most anterior of a set of four paired bones forming the roof of the skull, being followed in sequence by the frontals, the parietals, and the postparietals. Their form in living species is highly variable, depending on the shape of the head, but they generally form the roof of the snout or beak, running from the nostrils to a position short of the orbits. In most animals, they are generally therefore proportionally larger than in humans or great apes, because of the shortened faces of the latter. Turtles, unusually, lack nasal bones, with the prefrontal bones of the orbit reaching all the way to the nostrils (ISBN 0-03-910284-X)") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0000312") AnnotationAssertion( "EMAPA:19202") AnnotationAssertion( "FMA:52745") AnnotationAssertion( "GAID:222") AnnotationAssertion( "MA:0001494") AnnotationAssertion( "MESH:D009295") AnnotationAssertion( "NCIT:C33157") AnnotationAssertion( "OpenCyc:Mx4rwGOTZJwpEbGdrcN5Y29ycA") AnnotationAssertion( "TAO:0000365") AnnotationAssertion(Annotation( "ncithesaurus:Nasal_Bone") "UMLS:C0027422") AnnotationAssertion( "VHOG:0001370") AnnotationAssertion( "ZFA:0000365") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "ZFA:0000365") Annotation( ) "nasal bones") AnnotationAssertion(Annotation( "TAO:0000365") Annotation( ) "nasals") AnnotationAssertion(Annotation( ) Annotation( ) "os nasale") AnnotationAssertion( "UBERON:0001681") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "nasal bone") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/7/77/Illu_facial_bones.jpg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "facial series") Annotation( "ISBN:0073040584"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA-abduced-lr"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (palatine bone) AnnotationAssertion(Annotation( ) Annotation( ) "A paired dermal bone situated in the mid-palate[Palaeos].") AnnotationAssertion(Annotation( "TAO"^^xsd:string) ) AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0000015") Annotation( "TAO"^^xsd:string) Annotation( "TAO:GA_TG") "Dermal bone that forms the antero-lateral region of the palate and is located ventral to the autopalatine. The dermopalatine is bilaterally paired and usually bears teeth.[TAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( ) "Dermopalatine: same as palatine. The prefix is used by fish people because the palatine is a dermal replacement bone for a section of the autopalatine section of the palatoquadrate. In that context, palatine is potentially ambiguous.[Palaeos]") AnnotationAssertion(Annotation( "2012-09-06"^^xsd:string) Annotation( "TAO:0000015") Annotation( "TAO"^^xsd:string) Annotation( "Curator"^^xsd:string) "In ostariophysans, the dermopalatine is absent.[TAO]") AnnotationAssertion( "Fusion of dermopalatine+autopalatine.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:36619") AnnotationAssertion( "FMA:52746") AnnotationAssertion( "MA:0001495") AnnotationAssertion( "NCIT:C52745") AnnotationAssertion( "TAO:0000015") AnnotationAssertion(Annotation( "ncithesaurus:Palatine_Bone") "UMLS:C0222734") AnnotationAssertion( "palatine") AnnotationAssertion(Annotation( ) "dermopalatine") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "os palatinum") AnnotationAssertion( "palate bone") AnnotationAssertion(Annotation( ) "palatum") AnnotationAssertion( "UBERON:0001682") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "palatine bone") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/4/44/Gray996.png"^^xsd:anyURI) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA-abduced-lr"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "ISBN:0073040584"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (jugal bone) AnnotationAssertion(Annotation( "ISBN:0-683-40008-8"^^xsd:string) Annotation( "MP:0005270") "The quadrilateral bone that forms the prominence of the cheek.") AnnotationAssertion(Annotation( ) "The jugal is a skull bone found in most reptiles, amphibians, and birds. In mammals, the jugal is often called the malar or Zygomatic. It is connected to the quadratojugal and maxilla, as well as other bones, which may vary by species. This bone is considered key in the determination of general traits of the skull, in the case of creatures, as with dinosaurs in paleontology, whose entire skull has not been found[Wikipedia:Jugal_bone].") AnnotationAssertion(Annotation( ) "The zygomatic bone is a paired dermal bone which articulates with the maxilla. In humans it also articulates with the temporal bone, the sphenoid bone and the frontal bone. The zygomatic is homologous to the jugal bone of other tetrapods. It is situated at the upper and lateral part of the face and forms the prominence of the cheek, part of the lateral wall and floor of the orbit, and parts of the temporal and infratemporal fossae. It presents a malar and a temporal surface; four processes, the frontosphenoidal, orbital, maxillary, and temporal; and four borders[WP,modified][Wikipedia:Zygomatic_bone].") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001638") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-3899370805 Arratia G, Schultze HP, Wilson MVH, Mesozoic Fishes 4 - Homology and Phylogeny (2008) p.23-48") "(...) and the infraorbital bone 3 of advanced actinopterygians (is homologous) with the jugal bone of sarcopterygians.[well established][VHOG]") AnnotationAssertion( "In humans it also articulates with the temporal bone, the sphenoid bone and the frontal bone. The zygomatic is homologous to the jugal bone of other tetrapods. It is situated at the upper and lateral part of the face and forms the prominence of the cheek, part of the lateral wall and floor of the orbit, and parts of the temporal and infratemporal fossae. It presents a malar and a temporal surface; four processes, the frontosphenoidal, orbital, maxillary, and temporal; and four borders [Wikipedia:Zygomatic_bone, Wikipedia:Jugal_bone]") AnnotationAssertion( "vHOG says is homologous to infraorbital 3.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:25111") AnnotationAssertion( "FMA:52747") AnnotationAssertion( "GAID:225") AnnotationAssertion( "MA:0001497") AnnotationAssertion( "MFMO:0000146") AnnotationAssertion( "VHOG:0001638") AnnotationAssertion( "cheek bone") AnnotationAssertion(Annotation( "FMA:52747") "malar bone") AnnotationAssertion( "orbital bone") AnnotationAssertion(Annotation( "FMA:52747") Annotation( "FMA:TA"^^xsd:string) "os zygomaticum") AnnotationAssertion(Annotation( ) Annotation( "MA:0001497") Annotation( ) "zygomatic bone") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "jugal") AnnotationAssertion(Annotation( ) Annotation( "GAID:225") "jugal bone") AnnotationAssertion(Annotation( ) "jugale") AnnotationAssertion(Annotation( ) Annotation( ) "os zygomaticum") AnnotationAssertion(Annotation( ) "os zygomaticus") AnnotationAssertion(Annotation( ) "zygoma") AnnotationAssertion(Annotation( "GAID:225") "zygoma") AnnotationAssertion( "zygomatic") AnnotationAssertion( "UBERON:0001683") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "jugal bone") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/2/2d/Gray164.png"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "orbital series"^^xsd:string) Annotation( "ISBN:0073040584"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "ISBN:0073040584"^^xsd:string) ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) SubClassOf(Annotation( "FMA-abduced-lr"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (mandible) AnnotationAssertion(Annotation( ) Annotation( ) "A dentary bone that is the only bone in one of the lateral halves of the lower jaw skeleton.") AnnotationAssertion( "consider merging with dentary - for now we make it a mammal-specific subclass.") AnnotationAssertion( "mandibular") AnnotationAssertion(Annotation( "ZFA"^^xsd:string) "Note in ZFA 'mandible' is a syn for the ventral mandibular arch, which is a portion of the 1st pharyngeal arch; however the term 'mandibular symphysis' refers to the dentary") AnnotationAssertion( "'mandible' also refers to either the upper OR lower part of the beak in birds") AnnotationAssertion(Annotation( ) "lower jaw") AnnotationAssertion(Annotation( ) "lower jaw bone") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0001748") AnnotationAssertion( "CALOHA:TS-2225") AnnotationAssertion( "EFO:0001965") AnnotationAssertion( "EHDAA2:0001059") AnnotationAssertion( "EHDAA:8007") AnnotationAssertion( "EMAPA:18290") AnnotationAssertion( "FMA:52748") AnnotationAssertion( "GAID:68") AnnotationAssertion( "MA:0001487") AnnotationAssertion( "MESH:D008334") AnnotationAssertion( "NCIT:C12290") AnnotationAssertion(Annotation( "ncithesaurus:Mandible") "UMLS:C0024687") AnnotationAssertion( "galen:Mandible") AnnotationAssertion( "inferior maxillary bone") AnnotationAssertion( "mammaliam mandible") AnnotationAssertion( "mandibulla") AnnotationAssertion(Annotation( ) Annotation( ) "lower mandibula") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "mandibula") AnnotationAssertion(Annotation( "BTO:0001748") "mandibula") AnnotationAssertion(Annotation( "ZFA:0001273") "mandibular series") AnnotationAssertion( "UBERON:0001684") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "mandible") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/6/64/Gray176.png"^^xsd:anyURI) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (hyoid bone) AnnotationAssertion(Annotation( ) "A horseshoe shaped bone situated in the anterior midline of the neck between the chin and the thyroid cartilage. The hyoid bone provides attachment to the muscles of the floor of the mouth and the tongue above, the larynx below, and the epiglottis and pharynx behind. [WP,modified].") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0000684") Annotation( "AAO"^^xsd:string) Annotation( "AAO:LAP"^^xsd:string) "Paired processes that extend posterolaterally from the posterior margin of the hyoid plate. These processes are the ossified posteromedial processes and invest the laryngeal apparatus.[AAO]") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0000684") Annotation( "AAO"^^xsd:string) "relationship loss: part_of hyoid plate (AAO:0000664)[AAO]") AnnotationAssertion(Annotation( "https://github.com/obophenotype/uberon/issues/548") Annotation( "WP"^^xsd:string) "The hyoid bone is derived from the lower half of the second gill arch in fish, which separates the first gill slit from the spiracle. In many animals, it also incorporates elements of other gill arches, and has a correspondingly greater number of cornua. Amphibians and reptiles may have many cornua, while mammals (including humans) have two pairs, and birds only one. In birds, and some reptiles, the body of the hyoid is greatly extended forward, creating a solid bony support for the tongue. The howler monkey Alouatta has a pneumatized hyoid bone, one of the few cases of postcranial pneumatization of bones outside Saurischia.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0000684") AnnotationAssertion( "EMAPA:18650") AnnotationAssertion( "FMA:52749") AnnotationAssertion( "GAID:197") AnnotationAssertion( "MA:0001484") AnnotationAssertion( "MESH:D006928") AnnotationAssertion( "NCIT:C32752") AnnotationAssertion(Annotation( "ncithesaurus:Hyoid_Bone") "UMLS:C0020417") AnnotationAssertion( "VHOG:0001325") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "hyoid") AnnotationAssertion(Annotation( ) "hyoid bone") AnnotationAssertion(Annotation( ) "hyoideum") AnnotationAssertion(Annotation( ) "lingual bone") AnnotationAssertion(Annotation( ) "os hyoideum") AnnotationAssertion(Annotation( ) Annotation( ) "os hyoideum") AnnotationAssertion( "UBERON:0001685") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "hyoid bone") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/1/1f/Gray186.png"^^xsd:anyURI) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "Wikipedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "Wikipedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (auditory ossicle bone) AnnotationAssertion(Annotation( ) Annotation( ) "One of 3 small bones contained within the middle ear space and serve to transmit sounds from the air to the fluid-filled labyrinth. The absence of the auditory ossicles would constitute a moderate-to-severe hearing loss. The term 'ossicles' literally means 'tiny bones' and commonly refers to the auditory ossicles, though the term may refer to any small bone throughout the body. [WP,unvetted].") AnnotationAssertion( "This should probably be restricted to mammals - the AAO/XAO structures may group non-homologous structures [Wikipedia:Evolution_of_mammalian_auditory_ossicles] see https://github.com/seger/aao/issues/5.") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000461") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( ) "The small bones of the middle ear: incus, malleus, and stapes. [TFD][VHOG]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000461") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0030223693 Liem KF, Bemis WE, Walker WF, Grande L, Functional Anatomy of the Vertebrates: An Evolutionary Perspective (2001) p.695") "Additional structural analysis within a phylogenetic context has led to the remarkable discovery that in synapsids, thought to be ancestral to mammals, both the quadrate and articular have become reduced and less firmly articulated with their surrounding bones, reducing their jaw-joint-bearing role. This trend culminated with the incorporation of the quadrate, the columella (which remains articulated with the quadrate), and the articular into the expanded middle ear in mammals.[well established][VHOG]") AnnotationAssertion(Annotation( "WP"^^xsd:string) "Studies have shown that ear bones in mammal embryos are attached to the dentary, which is part of the jaw. These are ossified portions of cartilage -- called Meckel's cartilage -- that are attached to the jaw. As the embryo develops, the cartilage hardens to form bone. Later in development, the bone structure breaks loose from the jaw and migrates to the inner ear area. The structure is known as the middle ear, and is made up of the incus, stapes, malleus, and tympanic membrane. These correspond to the quadrate, prearticular, articular, and angular structures in the reptile jaw. For this reason, researchers believe the similarity of the results shows that mammals and reptiles have a common ancestry.") AnnotationAssertion( ) AnnotationAssertion(Annotation( ) Annotation( "EMAPA:17824") "ossicle") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0011015") AnnotationAssertion( "EHDAA2:0001183") AnnotationAssertion( "EHDAA:5697") AnnotationAssertion( "EMAPA:17824") AnnotationAssertion( "EV:0100360") AnnotationAssertion( "FMA:52750") AnnotationAssertion( "MA:0000254") AnnotationAssertion( "NCIT:C32164") AnnotationAssertion(Annotation( "ncithesaurus:Auditory_Ossicle") "UMLS:C0013450") AnnotationAssertion( "VHOG:0000461") AnnotationAssertion( "XAO:0000214") AnnotationAssertion( "auditory bone") AnnotationAssertion(Annotation( "MP:0005105") "middle ear ossicle") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "MA:0000254") "auditory ossicle") AnnotationAssertion(Annotation( "MA:0000254") "ear bone") AnnotationAssertion( "ear ossicle") AnnotationAssertion(Annotation( ) "ear ossicles") AnnotationAssertion( "middle ear bone") AnnotationAssertion( "ossicle of ear") AnnotationAssertion( "ossicle of inner ear") AnnotationAssertion(Annotation( ) "ossicular chain") AnnotationAssertion( "UBERON:0001686") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "auditory ossicle bone") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/b/b0/Illu_auditory_ossicles.jpg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) # Class: (stapes bone) AnnotationAssertion(Annotation( ) Annotation( ) "The stapes or stirrup is the stirrup-shaped small bone or ossicle in the middle ear which is attached to the incus laterally and to the fenestra ovalis, the 'oval window' medially. The oval window is adjacent to the vestibule of the inner ear. The stapes is the smallest and lightest bone in the human body. The stapes transmits the sound vibrations from the incus to the membrane of the inner ear inside the fenestra ovalis. The stapes is also stabilized by the stapedius muscle, which is innervated by the facial nerve. In non-mammalian vertebrates, the bone homologous to the stapes is usually called the columella; however, in reptiles, either term may be used[WP,unvetted].") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000688") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "DOI:10.1017/S0022215100009087 Gerrie J, The phylogeny of the mammalian tympanic cavity and auditory ossicles. The Journal of Laryngology and Otology (1948)") "This structure (the hyomandibular), on ontogenic grounds alone, can be considered homologous with the amphibian and reptilian columella and the mammalian stapes.[well established][VHOG]") AnnotationAssertion( "'This structure [the hyomandibular], on ontogenic grounds alone, can be considered homologous with the amphibian and reptilian columella and the mammalian stapes.' Gerrie J, The phylogeny of the mammalian tympanic cavity and auditory ossicles. The Journal of Laryngology and Otology (1948) 62:339-357?[VHOG].") AnnotationAssertion(Annotation( ) "As the stapes first develops embryologically from the 6th to 8th week of life, it surrounds the stapedial artery, which supplies the majority of the vasculature of the embryonic head. After that period, the external carotid artery is generated and takes over for the stapedial artery, which subsequently involutes, leaving the stapes with a windowframe-like structure[WP] The stapes develops at the cranial end of the second branchial arch through an independent anlage of the cartilage of this arch. Between the stapedial anlage and the cranial end of the Reichert's cartilage there is a formation called the interhyale, the internal segment of which gives rise to the tendon of the stapedial muscle. The stapedial anlage is a unique formation with two distinct parts: the superior part that will comprise the base and the inferior part that will be crossed by the stapedial artery during embryonic development and will constitute the limbs and the head of the stapes. According to the results, the otic capsule is not involved in formation of the base of the stapes.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:18585") AnnotationAssertion( "FMA:52751") AnnotationAssertion( "GAID:868") AnnotationAssertion( "MA:0001217") AnnotationAssertion( "MESH:D013199") AnnotationAssertion( "NCIT:C33612") AnnotationAssertion( "OpenCyc:Mx4rv5UnkZwpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Stapes") "UMLS:C0038152") AnnotationAssertion( "VHOG:0000688") AnnotationAssertion( "stirrup") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "columella") AnnotationAssertion(Annotation( "AAO:0000580") "columella auris") AnnotationAssertion(Annotation( "AAO:0000580") "columellare") AnnotationAssertion(Annotation( "AAO:0000580") "interstapediale") AnnotationAssertion(Annotation( "AAO:0000580") "mediostapediale") AnnotationAssertion(Annotation( "AAO:0000580") "mesostapediale") AnnotationAssertion(Annotation( "AAO:0000580") "os columellare") AnnotationAssertion(Annotation( "AAO:0000580") "os intermedium") AnnotationAssertion(Annotation( ) Annotation( ) "stapellos") AnnotationAssertion(Annotation( "AAO:0000580") "stapes") AnnotationAssertion(Annotation( "AAO:0000580") "stelidium") AnnotationAssertion(Annotation( "AAO:0000580") "stilus columellare") AnnotationAssertion( "UBERON:0001687") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "stapes bone") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/c/c1/Gray918.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "DOI:10.1111/j.1469-7580.2006.00524.x") Annotation( "classical definition") ObjectSomeValuesFrom( )) SubClassOf(Annotation( "definitional") ObjectSomeValuesFrom( )) # Class: (incus bone) AnnotationAssertion(Annotation( ) "The incus or anvil is the anvil-shaped small bone or ossicle in the middle ear. It connects the malleus to the stapes. It was first described by Alessandro Achillin of Bologna. The incus transmits sound vibrations from the malleus to the stapes. The incus only exists in mammals, and is derived from a reptilian upper jaw bone, the quadrate bone. Embryologically it is derived from the first pharyngeal arch along with the rest of the bones of mastication, such as the maxilla and mandible. [WP,unvetted].") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000689") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "DOI:10.1017/S0022215100009087 Gerrie J, The phylogeny of the mammalian tympanic cavity and auditory ossicles. The Journal of Laryngology and Otology (1948") "According to this theory (Reichert-Gaupp theory), the mammalian stapes is derived from the reptilian columella, the incus from the quadrate and the malleus from the articular (...).[well established][VHOG]") AnnotationAssertion(Annotation( "VHOG:0000689") "quadrate - incus") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:18583") AnnotationAssertion( "FMA:52752") AnnotationAssertion( "GAID:866") AnnotationAssertion( "MA:0001215") AnnotationAssertion( "MESH:D007188") AnnotationAssertion( "NCIT:C32770") AnnotationAssertion(Annotation( "ncithesaurus:Incus") "UMLS:C0021181") AnnotationAssertion( "VHOG:0000689") AnnotationAssertion(Annotation( "MA:0001215") "incus") AnnotationAssertion( "incus bone") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001688") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "incus bone") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/d/df/Gray917.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "EMAPA-implied") ObjectSomeValuesFrom( )) # Class: (malleus bone) AnnotationAssertion(Annotation( ) "The malleus or hammer is a hammer-shaped small bone or ossicle of the middle ear which connects with the incus and is attached to the inner surface of the eardrum. The word is Latin for hammer. It transmits the sound vibrations from the eardrum to the incus. The malleus is unique to mammals, and evolved from a lower jaw bone in basal amniotes called the articular, which still forms part of the jaw joint in reptiles. Embryologically it is derived from the first pharyngeal arch along with the rest of the bones of mastication, such as the maxilla and mandible. [WP,unvetted].") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000690") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "DOI:10.1017/S0022215100009087 Gerrie J, The phylogeny of the mammalian tympanic cavity and auditory ossicles. The Journal of Laryngology and Otology (1948") "According to this theory (Reichert-Gaupp theory), the mammalian stapes is derived from the reptilian columella, the incus from the quadrate and the malleus from the articular (...).[well established][VHOG]") AnnotationAssertion(Annotation( "VHOG:0000690") "anguloarticular - malleus") AnnotationAssertion(Annotation( "MA:0001216") "malleus") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:18584") AnnotationAssertion( "FMA:52753") AnnotationAssertion( "GAID:867") AnnotationAssertion( "MA:0001216") AnnotationAssertion( "MESH:D008307") AnnotationAssertion( "NCIT:C33051") AnnotationAssertion(Annotation( "ncithesaurus:Malleus") "UMLS:C0024631") AnnotationAssertion( "VHOG:0000690") AnnotationAssertion(Annotation( ) Annotation( ) "malleus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001689") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "malleus bone") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/6/6b/Gray916.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "cjm"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (ear) AnnotationAssertion(Annotation( ) Annotation( "GO:0042471") "Sense organ in vertebrates that is specialized for the detection of sound, and the maintenance of balance. Includes the outer ear and middle ear, which collect and transmit sound waves; and the inner ear, which contains the organs of balance and (except in fish) hearing. Also includes the pinna, the visible part of the outer ear, present in some mammals.") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000330") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( ) "The organ of hearing and of equilibrium. [TFD][VHOG]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000330") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "DOI:10.1002/dvdy.20207 Boekhoff-Falk G, Hearing in Drosophila: Development of Johnston's organ and emerging parallels to vertebrate ear development. Developmental Dynamics (2005)") "Both vertebrate and invertebrate auditory organs are thought to have evolved from primitive mechanosensors, but the nature of the ancestral structure and the evolutionary trajectories followed in distinct animal lineages remain unknown. In particular, we do not know how many types of mechanosensor existed in the protostome-deuterostome ancestor from which insects and vertebrates evolved or whether the PDA had an auditory organ.[well established][VHOG]") AnnotationAssertion( "auricular") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0011014") AnnotationAssertion( "BIRNLEX:1062") AnnotationAssertion( "BTO:0000368") AnnotationAssertion( "CALOHA:TS-1165") AnnotationAssertion( "EFO:0000826") AnnotationAssertion( "EHDAA2:0000423") AnnotationAssertion( "EHDAA:502") AnnotationAssertion( "EMAPA:16193") AnnotationAssertion( "EV:0100353") AnnotationAssertion( "FMA:52780") AnnotationAssertion( "GAID:62") AnnotationAssertion( "MA:0000236") AnnotationAssertion( "MAT:0000138") AnnotationAssertion( "MESH:D004423") AnnotationAssertion( "MIAA:0000138") AnnotationAssertion( "NCIT:C12394") AnnotationAssertion( "OpenCyc:Mx4rvViXS5wpEbGdrcN5Y29ycA") AnnotationAssertion( "OpenCyc:Mx4rvVjL05wpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "BIRNLEX:1062") "UMLS:C0013443") AnnotationAssertion(Annotation( "ncithesaurus:Ear") "UMLS:C0013443") AnnotationAssertion(Annotation( "BIRNLEX:1062") "UMLS:C0521421") AnnotationAssertion( "VHOG:0000330") AnnotationAssertion( "XAO:0000189") AnnotationAssertion( "galen:Ear") AnnotationAssertion( "uberon") AnnotationAssertion( "auditory apparatus") AnnotationAssertion(Annotation( "BTO:0000368") "auris") AnnotationAssertion( "UBERON:0001690") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "ear") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/b/b8/Ear.jpg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (external ear) AnnotationAssertion(Annotation( ) Annotation( "GO:0042473") "Part of the ear external to the tympanum (eardrum). It typically consists of a tube (the external auditory meatus) that directs sound waves on to the tympanum, and may also include the external pinna, which extends beyond the skull[GO].") AnnotationAssertion(Annotation( "Wikipedia"^^xsd:string) ) AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000311") Annotation( "VHOG"^^xsd:string) Annotation( ) "The external part of the organ, which consists of an outer portion (external auditory meatus) which leads to the tympanum. [Dorian_AF, Elsevier's_encyclopaedic_dictionary_of_medicine, Part_B:_Anatomy_(1988)_Amsterdam_etc.:_Elsevier][VHOG]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000311") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "DOI:10.1007/s00359-008-0327-1 Schoffelen RLM, Segenhout JM, Van Dijk P, Mechanics of the exceptional anuran ear. Journal of Comparative Physiology A (2008)") "Some species, like Amolops tormotus (Feng et al. 2006), have a cavity in front of the tympanic membrane which is considered to be an ear canal and thus an outer ear. (...) The ancestral lineage of amphibians separated from the mammalian lineage, approximately 350 million years ago, in the paleozoic era. Many of the important developments in the auditory systems emerged after the ancestral paths separated (Manley and Clack 2003). This implies that shared features, like the tympanic middle ear, developed independently in different vertebrate lineages.[uncertain][VHOG]") AnnotationAssertion(Annotation( "XAO"^^xsd:string) "in XAO this includes and is only the tympanum") AnnotationAssertion( "auricular region") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0011037") AnnotationAssertion( "BIRNLEX:1705") AnnotationAssertion( "BTO:0002100") AnnotationAssertion( "EFO:0004221") AnnotationAssertion( "EHDAA2:0000462") AnnotationAssertion( "EHDAA:3786") AnnotationAssertion( "EMAPA:16991") AnnotationAssertion( "EV:0100354") AnnotationAssertion( "FMA:52781") AnnotationAssertion( "GAID:104") AnnotationAssertion( "MA:0000258") AnnotationAssertion( "MAT:0000147") AnnotationAssertion( "MESH:D004431") AnnotationAssertion( "MIAA:0000147") AnnotationAssertion( "NCIT:C12292") AnnotationAssertion( "OpenCyc:Mx4rwOHtXJwpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "BIRNLEX:1705") "UMLS:C0013453") AnnotationAssertion(Annotation( "ncithesaurus:External_Ear") "UMLS:C0013453") AnnotationAssertion(Annotation( "BIRNLEX:1705") "UMLS:C1269548") AnnotationAssertion( "VHOG:0000311") AnnotationAssertion( "XAO:0000190") AnnotationAssertion( "auricular region of head") AnnotationAssertion(Annotation( "MA:0000258") "outer ear") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0002100") "auris externa") AnnotationAssertion( "UBERON:0001691") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "external ear") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/2/29/Gray907.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses( ) # Class: (basioccipital bone) AnnotationAssertion(Annotation( ) Annotation( ) "One of the bones of the occiput, the part of the skull which articulates with the spine. The basioccipital is located (if present) ventral to the foramen magnum. It often rests on or articulates with the basisphenoid, as well as meeting the exoccipitals. The basioccipital usually forms most (sometimes all) of the occipital condyle(s) and the ventral margin of the foramen magnum.") AnnotationAssertion( "TODO - check FMA") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0000039") Annotation( "AAO"^^xsd:string) Annotation( "AAO:EJS"^^xsd:string) "An unpaired medial bone contributing to the ventral margin of the foramen magnum that extends into the floor of the brain cavity. It can contribute to the centromedial portion of the occipital condyle.[AAO]") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0000472") Annotation( "TAO"^^xsd:string) Annotation( "TAO:GA_TG") "Chondral bone that articulates with the exoccipitals dorsally, the prootics anteriorly, the parasphenoid ventrally, and the first free vertebra posteriorly. The basioccipital forms the floor of the foramen magnum. The basioccipital is an unpaired medial bone.[TAO]") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0000472") Annotation( "TAO"^^xsd:string) "relationship loss: overlaps basioccipital-exoccipital joint (TAO:0002038)[TAO]") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0000472") Annotation( "TAO"^^xsd:string) "relationship loss: overlaps parasphenoid-basioccipital joint (TAO:0001832)[TAO]") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0000472") Annotation( "TAO"^^xsd:string) "relationship type change: overlaps neurocranium (TAO:0001580) CHANGED TO: part_of neurocranium (UBERON:0001703)[TAO]") AnnotationAssertion(Annotation( "2012-09-06"^^xsd:string) Annotation( "TAO:0000472") Annotation( "TAO"^^xsd:string) Annotation( "Curator"^^xsd:string) "In some teleosts the anterior vertebral centra fuse to the basioccipital forming a monopartite occipital condyle.[TAO]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0000039") AnnotationAssertion( "EMAPA:18705") AnnotationAssertion( "FMA:52858") AnnotationAssertion( "MA:0001462") AnnotationAssertion( "MFMO:0000045") AnnotationAssertion( "TAO:0000472") AnnotationAssertion( "VHOG:0001152") AnnotationAssertion( "ZFA:0000472") AnnotationAssertion( "basi-occipital") AnnotationAssertion( "basilar part of occipital bone") AnnotationAssertion( "basioccipital") AnnotationAssertion( "basioccipital bone") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "pars basilaris ossis occipitalis") AnnotationAssertion( "UBERON:0001692") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "basioccipital bone") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/c/c4/Parsbasilaris%28young%29.PNG"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (exoccipital bone) AnnotationAssertion(Annotation( ) Annotation( "ZFIN:curator"^^xsd:string) "Paired cartilage bone that bears a large foramen (lateral occipital foramen). Contacts the supraoccipital dorsally, the epiotic laterally and the basioccipital ventrally. Forms the posterior hind margin of the cranium and borders the lateral and posterior margins of the forum (foramen) magnum.") AnnotationAssertion( "TODO - check FMA - currently we place this as both of a zone of bone organ and an (endochondral) bone. Removed endochondral bone classification for now, violates disjointness axiom") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0000661") Annotation( "TAO"^^xsd:string) Annotation( "TAO:GA_TG") "Endochondral bone that articulates with the epiotic dorsally, the pterotic and intercalar laterally and the basioccipital medio-ventrally. The exoccipitals form the lateral borders of the foramen magnum and houses the foramina for the passage of the vagus and glossopharyngeal nerves, X and IX respectively. The exoccipital is a paired bone.[TAO]") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0000147") Annotation( "AAO"^^xsd:string) Annotation( "AAO:LAP"^^xsd:string) "Endochondral bone that forms the posterior end of the neurocranium and the margin of the foramen magnum. In addition, this bone forms either part of or all or the occipital condyle.[AAO]") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0000661") Annotation( "TAO"^^xsd:string) "relationship loss: develops_from occipital arch cartilage (TAO:0001504)[TAO]") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0000661") Annotation( "TAO"^^xsd:string) "relationship loss: overlaps basioccipital-exoccipital joint (TAO:0002038)[TAO]") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0000661") Annotation( "TAO"^^xsd:string) "relationship loss: overlaps prootic-exoccipital joint (TAO:0002034)[TAO]") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0000661") Annotation( "TAO"^^xsd:string) "relationship type change: overlaps neurocranium (TAO:0001580) CHANGED TO: part_of neurocranium (UBERON:0001703)[TAO]") AnnotationAssertion(Annotation( "2012-09-06"^^xsd:string) Annotation( "TAO:0000661") Annotation( "TAO"^^xsd:string) Annotation( "Curator"^^xsd:string) "In some teleosts the exoccipital dorsally contacts the supraoccipital directly or through connective tissue.[TAO]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0000147") AnnotationAssertion( "EMAPA:18708") AnnotationAssertion( "FMA:52859") AnnotationAssertion( "MA:0001464") AnnotationAssertion( "TAO:0000661") AnnotationAssertion( "VHOG:0001151") AnnotationAssertion( "ZFA:0000661") AnnotationAssertion(Annotation( "FMA:52859") "exoccipital") AnnotationAssertion(Annotation( "TAO:0000661") Annotation( ) "exoccipitals") AnnotationAssertion(Annotation( "FMA:52859") "lateral part of occipital bone") AnnotationAssertion(Annotation( "FMA:52859") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "pars lateralis ossis occipitalis") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "pars lateralis") AnnotationAssertion(Annotation( ) Annotation( ) "pars lateralis") AnnotationAssertion( "UBERON:0001693") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "exoccipital bone") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/b/bf/Gray131.png"^^xsd:anyURI) SubClassOf(Annotation( "ZFA"^^xsd:string) ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "ZFA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (petrous part of temporal bone) AnnotationAssertion(Annotation( ) "The petrous portion of the temporal bone or pyramid is pyramidal and is wedged in at the base of the skull between the sphenoid and occipital bones. Directed medially, forward, and a little upward, it presents for examination a base, an apex, three surfaces, and three angles, and contains, in its interior, the essential parts of the organ of hearing. The petrous portion is among the most basal elements of the skull and forms part of the endocranium.[WP,unvetted].") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001553") Annotation( "VHOG"^^xsd:string) Annotation( ) "The petrosal bone arises from the two otic bones on the lateral wall of the chondrocranium and encases the inner ear of mammals. [Bemis_WE, Functional_Anatomy_of_the_Vertebrates:_An_Evolutionary_Perspective, Grande_L, Third_Edition_(2001)_Orlando_Fla.:_Harcourt_College_Publishers, Walker_WF, p.258, see_Liem_KF][VHOG]") AnnotationAssertion( "derivative of prootic and opisthotic") AnnotationAssertion(Annotation( "VHOG:0001553") "petrosal") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0001452") AnnotationAssertion( "EMAPA:17683") AnnotationAssertion( "FMA:52871") AnnotationAssertion( "GAID:234") AnnotationAssertion( "MA:0001477") AnnotationAssertion( "MESH:D010579") AnnotationAssertion( "NCIT:C32316") AnnotationAssertion(Annotation( "ncithesaurus:Ciliary_Process") "UMLS:C1261761") AnnotationAssertion( "VHOG:0001553") AnnotationAssertion(Annotation( "FMA:52871") "pars petrosa (os temporale)") AnnotationAssertion( "pars petrosa ossis temporalis") AnnotationAssertion(Annotation( "FMA:52871") "petromastoid part of temporal bone") AnnotationAssertion( "temporal bone petrous part") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:52871") "petrosal bone") AnnotationAssertion(Annotation( "FMA:52871") "petrous bone") AnnotationAssertion( "UBERON:0001694") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "petrous part of temporal bone") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/9/96/Gray137.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (squamous part of temporal bone) AnnotationAssertion(Annotation( ) Annotation( ) Annotation( ) Annotation( "MP:0004423") "A bone which is fused with the temporal bone in many mammals and forms part of the cheek region articulating with quadrate and pterygoid in other vertebrates.") AnnotationAssertion( "consider separate class for squamosal OR making squamosal the primary label") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0000574") Annotation( "AAO"^^xsd:string) Annotation( "AAO:EJS"^^xsd:string) "Paired, intramembranous bones that lie at the posterolateral margins of the skull. Lateral and dorsal to the quadrate.[AAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001561") Annotation( "VHOG"^^xsd:string) Annotation( ) "The squamosal bone is part of the dermatocranium in early tetrapods and becomes part of the mammalian occipital and temporal bones. [Bemis_WE, Functional_Anatomy_of_the_Vertebrates:_An_Evolutionary_Perspective, Grande_L, Third_Edition_(2001)_Orlando_Fla.:_Harcourt_College_Publishers, Walker_WF, p.246, see_Liem_KF][VHOG]") AnnotationAssertion( "The squamosal bone, which is homologous with the squama, and forms the side of the cranium in many bony fish and tetrapods. Primitively, it is a flattened plate-like bone, but in many animals it is narrower in form, for example, where it forms the boundary between the two temporal fenestrae of diapsid reptiles") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0000574") AnnotationAssertion( "EMAPA:18021") AnnotationAssertion( "FMA:52883") AnnotationAssertion( "MA:0001473") AnnotationAssertion( "VHOG:0001561") AnnotationAssertion(Annotation( ) "os squamosum") AnnotationAssertion( "pars squamosa (os temporale)") AnnotationAssertion(Annotation( "FMA:52883") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "pars squamosa ossis temporalis") AnnotationAssertion(Annotation( ) "squama temporalis") AnnotationAssertion(Annotation( "AAO:0000574") "squamosal") AnnotationAssertion(Annotation( ) Annotation( "MA:0001473") "squamosal bone") AnnotationAssertion( "squamosum") AnnotationAssertion(Annotation( ) "squamous bone") AnnotationAssertion(Annotation( "MP:0004423") Annotation( "VHOG:0001561") "temporal bone squamous part") AnnotationAssertion( "uberon") AnnotationAssertion( "squama") AnnotationAssertion(Annotation( ) Annotation( ) "squama temporalis") AnnotationAssertion( "UBERON:0001695") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "squamous part of temporal bone") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/e/eb/Skull_synapsida_1.png"^^xsd:anyURI) AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/f/fd/Gray144.png"^^xsd:anyURI) SubClassOf(Annotation( "EHDAA2-inferred") ) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "see comments") ObjectSomeValuesFrom( )) SubClassOf(Annotation( "temporal series") Annotation( "ISBN:0073040584"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (orbit of skull) AnnotationAssertion(Annotation( ) Annotation( ) Annotation( "TAO:0001410") "Subdivision of skeleton that is an anterolateral part of the cranium and structurally supports the eye. Includes bones formed and located in sclerotic layer of eyeball.") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0001410") Annotation( "TAO"^^xsd:string) Annotation( "TAO:MAH") "Anatomical cluster that is a anterolateral part of the cranium and structurally supports the eye.[TAO]") AnnotationAssertion(Annotation( "FMA"^^xsd:string) "in FMA, this overlaps with bones such as the maxilla and sphenoid; in ZFA, individual bones are part of the orbit") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0004687") AnnotationAssertion( "FMA:53074") AnnotationAssertion( "GAID:223") AnnotationAssertion( "MA:0002482") AnnotationAssertion( "MESH:D009915") AnnotationAssertion( "NCIT:C12347") AnnotationAssertion( "OpenCyc:Mx4rvW8EgZwpEbGdrcN5Y29ycA") AnnotationAssertion( "TAO:0001410") AnnotationAssertion(Annotation( "ncithesaurus:Orbit") "UMLS:C0029180") AnnotationAssertion( "XAO:0003171") AnnotationAssertion( "ZFA:0001410") AnnotationAssertion( "galen:Orbit") AnnotationAssertion( "bony orbit") AnnotationAssertion( "eye socket") AnnotationAssertion(Annotation( "FMA:53074") "orbit of skull") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "ZFA:0001410") "orbit") AnnotationAssertion( "UBERON:0001697") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "orbit of skull") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA-abduced-lr"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (foramen ovale of skull) AnnotationAssertion(Annotation( ) "One of the larger of the several holes at the base of the skull that transmit nerves through the skull. The foramen ovale is situated in the anterior part of the sphenoid bone, posteriolateral to the foramen rotundum..") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001189") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( ) "An aperture in the great wing of the sphenoid for vessels and nerves. [TFD][VHOG]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0000169") AnnotationAssertion( "EHDAA2:0000551") AnnotationAssertion( "EHDAA:10627") AnnotationAssertion( "EMAPA:18711") AnnotationAssertion( "FMA:53155") AnnotationAssertion( "VHOG:0001189") AnnotationAssertion( "galen:ForamenOvaleBasisCranii") AnnotationAssertion(Annotation( "FMA:53155") "foramen ovale (skull)") AnnotationAssertion(Annotation( "galen:ForamenOvaleBasisCranii") "foramen ovale basis cranii") AnnotationAssertion( "foramen ovale cranii") AnnotationAssertion(Annotation( "EMAPA:18711") "foramen ovale of chondrocranium") AnnotationAssertion( "foramen ovale of cranium") AnnotationAssertion(Annotation( "AAO:0000169") Annotation( "FMA:53155") "foramen ovale") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:53155") "foramen ovale of sphenoid") AnnotationAssertion( "UBERON:0001698") AnnotationAssertion(rdfs:label "foramen ovale of skull") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses( ) # Class: (sensory root of facial nerve) AnnotationAssertion(Annotation( ) "The nervus intermedius, or intermediate nerve, is the part of the facial nerve (cranial nerve VII) located between the motor component of the facial nerve and the vestibulocochlear nerve (cranial nerve VIII). It contains the sensory and parasympathetic fibers of the facial nerve. Upon reaching the facial canal, it joins with the motor root of the facial nerve at the geniculate ganglion. [WP,unvetted].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:iVIIn") AnnotationAssertion( "BAMS:imn") AnnotationAssertion( "DHBA:12864") AnnotationAssertion( "FMA:53410") AnnotationAssertion( "MBA:1131") AnnotationAssertion( "TAO:0000679") AnnotationAssertion( "ZFA:0000679") AnnotationAssertion( "sensory component of the VIIth (facial) nerve") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:53410") "Wrisberg's nerve") AnnotationAssertion(Annotation( "FMA:53410") "intermediate nerve") AnnotationAssertion( "nerve of Wrisberg") AnnotationAssertion(Annotation( "FMA:53410") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "nervus intermedius") AnnotationAssertion( "pars intermedii of Wrisberg") AnnotationAssertion(Annotation( "ZFA:0000679") Annotation( ) "sensory roots of facial nerves") AnnotationAssertion( "UBERON:0001699") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "sensory root of facial nerve") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/6/6b/Gray788.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "Wikipedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (geniculate ganglion) AnnotationAssertion(Annotation( "ISBN:0-683-40008-8"^^xsd:string) Annotation( "MP:0001082") "The group of sensory neuron cell bodies associated with the facial nerve (seventh cranial nerve).") AnnotationAssertion( "resolve facial VII vs geniculate (see EHDAA2)") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000707") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "DOI:10.1046/j.1469-7580.2001.19910133.x Graham A. The development and evolution of the pharyngeal arches. J Anat (2001)"^^xsd:string) "These (the epibranchial placodes) are focal thickenings of the embryonic ectoderm that form immediately dorsal and caudal of the clefts between the pharyngeal arches in all vertebrates, and they produce the neuroblasts which migrate and condense to form the distal cranial ganglia: the geniculate, petrosal and nodose ganglia. (...) The one substantial difference between the vertebrate pharyngeal arches and those of the protochordates is the presence of the epibranchial placodes but the evolution of these structures was undoubtedly driven by the endoderm.[well established][VHOG]") AnnotationAssertion(Annotation( ) "geniculate") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:GgVII") AnnotationAssertion( "EFO:0003669") AnnotationAssertion( "EHDAA2:0000491") AnnotationAssertion( "EHDAA2:0004623") AnnotationAssertion( "EHDAA:5567") AnnotationAssertion( "EHDAA:6644") AnnotationAssertion( "EMAPA:17569") AnnotationAssertion( "FMA:53414") AnnotationAssertion( "GAID:718") AnnotationAssertion( "MA:0001076") AnnotationAssertion( "MESH:D005830") AnnotationAssertion( "NCIT:C12721") AnnotationAssertion( "TAO:0001291") AnnotationAssertion(Annotation( "ncithesaurus:Geniculate_Ganglion") "UMLS:C0017406") AnnotationAssertion( "VHOG:0000707") AnnotationAssertion( "ZFA:0001291") AnnotationAssertion(Annotation( "MA:0001076") "facial VII ganglion") AnnotationAssertion(Annotation( "ZFA:0001291") "gVII") AnnotationAssertion(Annotation( "FMA:53414") "ganglion genicularum") AnnotationAssertion(Annotation( ) "genicular ganglion") AnnotationAssertion(Annotation( "FMA:53414") "genicular ganglion") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "ZFA:0001291") "facial ganglion") AnnotationAssertion(Annotation( ) "ganglion geniculi") AnnotationAssertion(Annotation( ) Annotation( ) "ganglion geniculi nervi facialis") AnnotationAssertion(Annotation( "MA:0001076") "geniculate ganglion") AnnotationAssertion(Annotation( ) "internal genu") AnnotationAssertion( "UBERON:0001700") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "geniculate ganglion") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/7/7d/Gray789.png"^^xsd:anyURI) SubClassOf(Annotation( "ncithesaurus"^^xsd:string) ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "EHDAA2:0004623") Annotation( "ZFA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2:0004623") ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2:0000491") ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (glossopharyngeal ganglion) AnnotationAssertion(Annotation( "MP:0001096") "The group of neuron cell bodies associated with the ninth cranial nerve.") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000702") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "DOI:10.1046/j.1469-7580.2001.19910133.x Graham A. The development and evolution of the pharyngeal arches. J Anat (2001)"^^xsd:string) "These (the epibranchial placodes) are focal thickenings of the embryonic ectoderm that form immediately dorsal and caudal of the clefts between the pharyngeal arches in all vertebrates, and they produce the neuroblasts which migrate and condense to form the distal cranial ganglia: the geniculate, petrosal and nodose ganglia. (...) The one substantial difference between the vertebrate pharyngeal arches and those of the protochordates is the presence of the epibranchial placodes but the evolution of these structures was undoubtedly driven by the endoderm.[well established][VHOG]") AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0000710") AnnotationAssertion( "EHDAA:2838") AnnotationAssertion( "EMAPA:16795") AnnotationAssertion( "FMA:53471") AnnotationAssertion( "MA:0001077") AnnotationAssertion( "TAO:0001301") AnnotationAssertion( "VHOG:0000702") AnnotationAssertion( "ZFA:0001301") AnnotationAssertion( "ganglion of glossopharyngeal nerve") AnnotationAssertion(Annotation( "FMA:53471") "ganglion of glosspharyngeal nerve") AnnotationAssertion(Annotation( "MA:0001077") "glossopharyngeal IX ganglion") AnnotationAssertion(Annotation( "ZFA:0001301") "petrosal ganglion") AnnotationAssertion( "uberon") AnnotationAssertion( "gIX") AnnotationAssertion( "UBERON:0001701") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "glossopharyngeal ganglion") SubClassOf(Annotation( "ZFA"^^xsd:string) ) SubClassOf(Annotation( "dorsal") Annotation( "EHDAA2"^^xsd:string) Annotation( "ISBN:0471888893"^^xsd:string) Annotation( "ZFA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "ventrolateral") Annotation( "EHDAA2"^^xsd:string) Annotation( "ISBN:0471888893"^^xsd:string) Annotation( "ZFA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (eyelash) AnnotationAssertion(Annotation( "MGI:anna"^^xsd:string) "Any of the hairs that grow at the edge of the upper or lower eyelid.") AnnotationAssertion( "eyelashes protect the eye from debris and are sensitive to touch, thus providing a warning that an object is near the eye (which is then closed reflexively)") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:53669") AnnotationAssertion( "GAID:73") AnnotationAssertion( "MA:0002702") AnnotationAssertion( "MESH:D005140") AnnotationAssertion( "NCIT:C32576") AnnotationAssertion( "OpenCyc:Mx4rvVi41pwpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Eyelash") "UMLS:C0015422") AnnotationAssertion( "eyelid cilium") AnnotationAssertion( "uberon") AnnotationAssertion( "blepharis") AnnotationAssertion(Annotation( ) Annotation( ) "cilia") AnnotationAssertion(Annotation( ) Annotation( ) "cilium") AnnotationAssertion(Annotation( ) "eyelid cilia") AnnotationAssertion( "hair of eyelid") AnnotationAssertion( "UBERON:0001702") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "eyelash") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/9/96/N2_Human_eye.jpg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (neurocranium) AnnotationAssertion(Annotation( ) Annotation( ) Annotation( "TAO:MAH") Annotation( "ZFA:0001580") "Subdivision of skeletal system that surrounds and protects the brain. Includes the skull base, sensory capsules and the central part of the skull roof.") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0001580") Annotation( "TAO"^^xsd:string) Annotation( "TAO:MAH") "Anatomical cluster that consists of the cartilages and bones that surround the brain.[TAO]") AnnotationAssertion( "neurocranial") AnnotationAssertion( "It includes the following bones: Ethmoid bone, Frontal bone, Occipital bone, Parietal bone, Sphenoid bone, Temporal bone. The term cranium can be ambiguous, in that it can refer to the neurocranium, or the neurocranium and the Facial skeleton") AnnotationAssertion(Annotation( "WP"^^xsd:string) "The cartilaginous parts of the neurocranium undergo endochondral ossification in most species; ossification has been lost in cartilaginous fishes, but the cartilaginous condition of the skull of lampreys is considered to be primitive (Kardong, 1995)[PMID:11523816]. The neurocranium arises from paraxial mesoderm in the head (first five somites and the unsegmented somitomeres rostral to the first somite) and from ectoderm via the neural crest. In Chondrichthyes and other cartilaginous vertebrates this portion of the cranium does not ossify; it is not replaced via endochondral ossification[WP].") AnnotationAssertion(Annotation( "MA"^^xsd:string) "It seems MA uses 'neurocranium' as a synonym for chondrocranium. Note there are currently some structures part of both viscero and neurocranium - ethmoid, zyogomatic, ...") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010153") AnnotationAssertion( "EHDAA2:0000243") AnnotationAssertion( "EMAPA:17681") AnnotationAssertion( "FMA:53672") AnnotationAssertion( "MA:0000317") AnnotationAssertion( "TAO:0001580") AnnotationAssertion( "XAO:0003170") AnnotationAssertion( "ZFA:0001580") AnnotationAssertion( "brain box") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "ZFA:0001580") "brain case") AnnotationAssertion(Annotation( ) "brain pan") AnnotationAssertion(Annotation( "ZFA:0001580") "braincase") AnnotationAssertion( "UBERON:0001703") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "neurocranium") SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete viscerocranium) AnnotationAssertion( "this class was made obsolete as it conflated the facial skeleton with the splanchnocranium. The facial skeleton includes: * Inferior nasal concha * Lacrimal bone * Mandible * Maxilla * Nasal bone * Palatine bone * Vomer * Zygomatic bone. The hyoid is sometimes included, and sometimes excluded (FMA includes it) (See also notes for ethmoid bone). The splanchoncranium is the endoskeleton derived from pharyngeal arches.") AnnotationAssertion( "UBERON:0008895") AnnotationAssertion( "UBERON:0011156") AnnotationAssertion( ) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001704") AnnotationAssertion(rdfs:label "obsolete viscerocranium") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (nail) AnnotationAssertion(Annotation( ) Annotation( ) "A horn-like keratin structure covering the dorsal aspect of the terminal phalanges of fingers and toes[WP].") AnnotationAssertion( "Use this class for both the nails of primates and the homologous claws of mammals such as mouse.") AnnotationAssertion( "A primate's nail consists of the unguis alone; the subunguis has disappeared") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0001719") AnnotationAssertion( "CALOHA:TS-2034") AnnotationAssertion( "EFO:0000956") AnnotationAssertion( "EMAPA:35580") AnnotationAssertion( "EV:0100159") AnnotationAssertion( "FMA:54326") AnnotationAssertion( "GAID:1320") AnnotationAssertion( "MA:0002703") AnnotationAssertion( "MAT:0000158") AnnotationAssertion( "MESH:D009262") AnnotationAssertion( "MIAA:0000158") AnnotationAssertion( "NCIT:C33156") AnnotationAssertion( "OpenCyc:Mx4rvVjJv5wpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Nail") "UMLS:C0027342") AnnotationAssertion( "VHOG:0001361") AnnotationAssertion( "galen:Nail") AnnotationAssertion(Annotation( ) "nail/claw") AnnotationAssertion(Annotation( ) Annotation( ) "claw") AnnotationAssertion( "uberon") AnnotationAssertion( "talon") AnnotationAssertion( "UBERON:0001705") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "The nails of humans and the claws are moth are highly similar. Both species have a proximal nail fold, cuticle, nail matrix, nail bed, nail plate, and hyponychium. Distinguishing features are the shape of the nail and the presence of an extended hyponychium in the mouse [PMC3579226]") AnnotationAssertion(rdfs:label "nail") SubClassOf( ) # Class: (nasal septum) AnnotationAssertion(Annotation( ) "The nasal septum separates the left and right airways in the nose, dividing the two nostrils. It is depressed by the Depressor septi nasi muscle. [WP,unvetted].") AnnotationAssertion( "We follow AAO in making this part of the nasal skeleton") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000017") Annotation( "VHOG"^^xsd:string) Annotation( ) "A median dividing wall, sagittally directed, which divides the nasal cavity into the right and the left nasal fossae. [Dorian_AF, Elsevier's_encyclopaedic_dictionary_of_medicine, Part_B:_Anatomy_(1988)_Amsterdam_etc.:_Elsevier][VHOG]") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0010135") Annotation( "AAO"^^xsd:string) Annotation( "AAO:EJS"^^xsd:string) "Medial vertical wall between nasal capsules.[AAO]") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0000559") Annotation( "AAO"^^xsd:string) Annotation( "AAO:LAP"^^xsd:string) "Medial, vertical plate that separates the nasal capsules.[AAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000017") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "DOI:10.1098/rstb.2001.0976 Kuratani S, Nobusada Y, Horigome N, Shigetani Y, Embryology of the lamprey and evolution of the vertebrate jaw: insights from molecular and developmental perspectives. Philosophical transactions of the Royal Society of London (2001)") "Whatever the common ancestor of the lamprey and gnathostomes may have looked like, it most likely possessed a neural-crest-derived premandibular ectomesenchyme closely associated with the NHP. Invention of the jaw subsequently required a space for the nasal septum and maxillary process to develop, which might have been provided by subdivision of the NHP into the nasal placode and the hypophysis (diplorhiny, the state of bilaterally separated nasal openings, would also have been a prerequisite for this).[well established][VHOG]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0000559") AnnotationAssertion( "AAO:0010135") AnnotationAssertion( "EHDAA2:0001234") AnnotationAssertion( "EHDAA2:0004104") AnnotationAssertion( "EHDAA:6809") AnnotationAssertion( "EMAPA:17608") AnnotationAssertion( "FMA:54375") AnnotationAssertion( "GAID:115") AnnotationAssertion( "MA:0000285") AnnotationAssertion( "MESH:A02.165.639") AnnotationAssertion( "NCIT:C33160") AnnotationAssertion( "OpenCyc:Mx4rv7e-k5wpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Nasal_Septum") "UMLS:C0027432") AnnotationAssertion( "VHOG:0000017") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "septal cartilage") AnnotationAssertion(Annotation( ) "septum mobile nasi") AnnotationAssertion(Annotation( ) "septum nasi") AnnotationAssertion(Annotation( ) Annotation( ) "septum nasi") AnnotationAssertion(Annotation( ) "septum of the nose") AnnotationAssertion( "UBERON:0001706") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "nasal septum") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/6/65/Gray854.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "AAO"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "AAO"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2-abduced") ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (nasal cavity) AnnotationAssertion(Annotation( ) "An anatomical cavity that is part of the olfactory apparatus. This includes the space bounded anteriorly by the nares and posteriorly by the choanae, when these structures are present.") AnnotationAssertion( "define the boundaries of this cavity for a variety of species and check that parthood relations are not too strong.") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0000314") Annotation( "AAO"^^xsd:string) Annotation( "AAO:LAP"^^xsd:string) "Saclike space internal to the nasal capsule lined by respiratory and sensory epithelium and glandular tissue.[AAO]") AnnotationAssertion(Annotation( ) "a large air filled space above and behind the nose in the middle of the face[WP][Wikipedia:Nasal_cavity].") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000271") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "DOI:10.1666/0094-8373(2006)032[0109:NCHACC]2.0.CO;2 Evans DC, Nasal cavity homologies and cranial crest function in lambeosaurine dinosaurs. Paleobiology (2006)") "Despite significant modification to the nasal cavity within Archosauria and its extreme hypertrophy and supraorbital development in Lambeosaurinae, the neural olfactory system and the olfactory region of the nasal cavity proper retain their plesiomorphic positions and associations, suggesting that this system is highly conserved in vertebrate evolution.[well established][VHOG]") AnnotationAssertion(Annotation( "HP") "in humans, the cavity includes and starts at the nares and reaches all the way through to the and includes the choanae, the posterior nasal apertures") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0000314") AnnotationAssertion( "BTO:0002096") AnnotationAssertion( "EHDAA2:0001226") AnnotationAssertion( "EHDAA:6801") AnnotationAssertion( "EMAPA:17604") AnnotationAssertion( "FMA:54378") AnnotationAssertion( "GAID:350") AnnotationAssertion( "MA:0000284") AnnotationAssertion( "MESH:D009296") AnnotationAssertion( "NCIT:C12424") AnnotationAssertion( "TAO:0000130") AnnotationAssertion(Annotation( "ncithesaurus:Nasal_Cavity") "UMLS:C0027423") AnnotationAssertion( "VHOG:0000271") AnnotationAssertion( "ZFA:0000130") AnnotationAssertion( "cavity of nose") AnnotationAssertion(Annotation( ) "cavity of olfactory apparatus") AnnotationAssertion(Annotation( "ZFA:0000130") "nasal canal") AnnotationAssertion(Annotation( ) "nasal conduit space") AnnotationAssertion(Annotation( ) "nasal fossa") AnnotationAssertion(Annotation( ) "olfactory chamber cavity") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0002096") "cavitas nasalis") AnnotationAssertion(Annotation( ) Annotation( ) "cavitas nasi") AnnotationAssertion(Annotation( "BTO:0002096") "cavitas nasi") AnnotationAssertion(Annotation( ) Annotation( ) "cavum nasi") AnnotationAssertion( "nasal pit") AnnotationAssertion( "olfactory cavity") AnnotationAssertion(Annotation( ) "olfactory chamber") AnnotationAssertion(Annotation( "ZFA:0000130") Annotation( ) "olfactory pit") AnnotationAssertion( "UBERON:0001707") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "nasal cavity") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/d/d4/Illu01_head_neck.jpg"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "cjm"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (jaw skeleton) AnnotationAssertion(Annotation( ) Annotation( ) "Subdivision of skeleton which includes upper and lower jaw skeletons.") AnnotationAssertion( "TODO - move ZFA:0001227 (it is the entire jaw skeleton).") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0001227") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "Skeletal and cartilage elements of the first pharyngeal arch.[TAO]") AnnotationAssertion( "There are cellular contributions from all three embryonic germ layers: pharyngeal mesoderm, endoderm and neural crest that migrates out of the ectoderm (Noden, 1983).") AnnotationAssertion(Annotation( "FMA"^^xsd:string) "in FMA, the jaw is an organism subdivision cluster, and includes mucosal tissue such as the gingiva as parts. It appears to be skeletal in MA (and has teeth as parts). It is reasonable to assume that ZFA and XAO consider the upper and lower jaws to be skeletal elements or clusters. EHDAA2 also considers these clusters. TODO - follow EHDAA2 model. These arbitrary differences in terminology and classification have to be reconciled with the genuine well-known biological differences in the skeletal elements across vertebrates") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0000988") AnnotationAssertion( "BTO:0001749") AnnotationAssertion( "EMAPA:35455") AnnotationAssertion( "FMA:54396") AnnotationAssertion( "GAID:214") AnnotationAssertion( "MA:0001905") AnnotationAssertion( "MESH:D007568") AnnotationAssertion( "NCIT:C48821") AnnotationAssertion( "OpenCyc:Mx4rvVjjEZwpEbGdrcN5Y29ycA") AnnotationAssertion( "TAO:0001227") AnnotationAssertion(Annotation( "ncithesaurus:Jaw") "UMLS:C0022359") AnnotationAssertion( "ZFA:0001227") AnnotationAssertion( "galen:Jaw") AnnotationAssertion(Annotation( "MA:0001905") "jaw") AnnotationAssertion(Annotation( "ZFA:0001227") "jaw cartilage") AnnotationAssertion(Annotation( "ZFA:0001227") "mandibular arch skeleton") AnnotationAssertion( "uberon") AnnotationAssertion( "anterior splanchnocranium") AnnotationAssertion( "jaws") AnnotationAssertion(Annotation( "TAO:0001227") "mandibular arch") AnnotationAssertion( "oral jaw skeleton") AnnotationAssertion( "pharyngeal arch 1 skeleton") AnnotationAssertion( "visceral arch 1") AnnotationAssertion( "UBERON:0001708") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "jaw skeleton") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "cjm"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) SubClassOf( ObjectSomeValuesFrom( )) # Class: (upper jaw region) AnnotationAssertion(Annotation( ) Annotation( ) "Subdivision of head that consists of the upper jaw skeletal elements plus associated soft tissue (skin, lips, muscle)[cjm].") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0000620") Annotation( "AAO"^^xsd:string) Annotation( "AAO:LAP"^^xsd:string) "Superior maxillary arch located on the anterior and lateral sides of the skull.[AAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000454") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "DOI:10.1046/j.1469-7580.2001.19910133.x Graham A. The development and evolution of the pharyngeal arches. J Anat (2001)"^^xsd:string) "Subsequent vertebrate evolution has also involved major alterations to the pharynx; perhaps the most notable occurred with the evolution of the gnathostomes. This involved substantial modifications to the most anterior pharyngeal segments, with the jaw forming from the first, anterior, pharyngeal segment, while the second formed its supporting apparatus, the hyoid.[well established][VHOG]") AnnotationAssertion(Annotation( "MA"^^xsd:string) "Note isa/partof difference MA/FMA") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0000620") AnnotationAssertion( "EHDAA2:0002118") AnnotationAssertion( "EHDAA2:0004607") AnnotationAssertion( "EHDAA:8025") AnnotationAssertion( "EMAPA:17924") AnnotationAssertion( "FMA:59399") AnnotationAssertion( "VHOG:0000454") AnnotationAssertion( "ncithesaurus:Upper_Jaw") AnnotationAssertion(Annotation( "FMA:59399") "maxillary part of mouth") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:59399") "alveolodental arch of bimaxilla") AnnotationAssertion( "dorsal mandibular arch") AnnotationAssertion(Annotation( ) "dorsal pharyngeal arch 1") AnnotationAssertion(Annotation( "FMA:59399") "maxillary part of mouth proper") AnnotationAssertion(Annotation( ) "palatoquadrate arch") AnnotationAssertion( "upper pharyngeal jaws") AnnotationAssertion( "UBERON:0001709") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "See notes for jaw w.r.t skeletal element vs subdivision of head.") AnnotationAssertion(rdfs:label "upper jaw region") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/a/a7/Gray189.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses( ) # Class: (lower jaw region) AnnotationAssertion(Annotation( ) "Subdivision of head that consists of the lower jaw skeletal elements plus associated soft tissue (skin, lips, muscle)[cjm].") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0000272") Annotation( "AAO"^^xsd:string) Annotation( "AAO:LAP"^^xsd:string) "Inferior mandibular arch located on the anterior and lateral sides of the skull.[AAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000453") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "DOI:10.1046/j.1469-7580.2001.19910133.x Graham A. The development and evolution of the pharyngeal arches. J Anat (2001)"^^xsd:string) "Subsequent vertebrate evolution has also involved major alterations to the pharynx; perhaps the most notable occurred with the evolution of the gnathostomes. This involved substantial modifications to the most anterior pharyngeal segments, with the jaw forming from the first, anterior, pharyngeal segment, while the second formed its supporting apparatus, the hyoid.[well established][VHOG]") AnnotationAssertion(Annotation( "MA"^^xsd:string) "Note isa/partof difference MA/FMA") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0000272") AnnotationAssertion( "EFO:0003660") AnnotationAssertion( "EHDAA2:0001018") AnnotationAssertion( "EHDAA:7995") AnnotationAssertion( "EMAPA:17906") AnnotationAssertion( "FMA:59398") AnnotationAssertion( "MESH:D008334") AnnotationAssertion( "VHOG:0000453") AnnotationAssertion( "ncithesaurus:Lower_Jaw") AnnotationAssertion(Annotation( "FMA:59398") "mandibular part of mouth") AnnotationAssertion( "uberon") AnnotationAssertion( "lower part of mouth") AnnotationAssertion( "mandibular series") AnnotationAssertion( "UBERON:0001710") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "See notes for jaw w.r.t skeletal element vs subdivision of head") AnnotationAssertion(rdfs:label "lower jaw region") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/6/64/Gray176.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (eyelid) AnnotationAssertion(Annotation( ) "A fold of skin that covers and protects part of the eyeball. Examples: upper eyelid, lower eyelid, nictitating membrane.") AnnotationAssertion( "blepharic") AnnotationAssertion( "palpebral") AnnotationAssertion( "In humans the upper and lower eyelid consists of the following layers, starting anteriorly: (1) skin, (2) a layer of subcutaneous connective tissue, (3) a layer of striated muscle fibres of the orbicularis muscle, (4) a layer of submuscular connective tissue, (5) a fibrous layer, including the tarsal plates, (6) a layer of smooth muscle, (7) the palpebral conjunctiva.") AnnotationAssertion(Annotation( "MA"^^xsd:string) "Consider adding 'eye surface', like MA") AnnotationAssertion(Annotation( "FMA"^^xsd:string) "FMA divides this into skin, fascia, conjunctiva") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0002241") AnnotationAssertion( "EHDAA2:0000487") AnnotationAssertion( "EHDAA:9037") AnnotationAssertion( "EMAPA:17829") AnnotationAssertion( "EV:0100338") AnnotationAssertion( "FMA:54437") AnnotationAssertion( "GAID:72") AnnotationAssertion( "MA:0000268") AnnotationAssertion( "MESH:D005143") AnnotationAssertion( "NCIT:C12713") AnnotationAssertion( "OpenCyc:Mx4rvVi4m5wpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Eyelid") "UMLS:C0015426") AnnotationAssertion( "VHOG:0000016") AnnotationAssertion( "blepharon") AnnotationAssertion( "eye lid") AnnotationAssertion( "palpebra") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "blephara") AnnotationAssertion(Annotation( ) "palpebrae") AnnotationAssertion( "UBERON:0001711") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "eyelid") AnnotationAssertion( "Eye:makeup.jpg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "multiple"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (upper eyelid) AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000389") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0030223693 Liem KF, Bemis WE, Walker WF, Grande L, Functional Anatomy of the Vertebrates: An Evolutionary Perspective (2001) p.431") "A tetrapod's eye usually has one or more eyelids that can move across its surface and protect and cleanse it. The eye of lissamphibians has a stationary upper eyelid but a movable and transparent lower one.[well established][VHOG]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0002115") AnnotationAssertion( "EHDAA:9047") AnnotationAssertion( "EMAPA:17834") AnnotationAssertion( "FMA:54439") AnnotationAssertion( "MA:0001267") AnnotationAssertion( "NCIT:C49581") AnnotationAssertion( "OpenCyc:Mx4rvg4ohJwpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Upper_Eyelid") "UMLS:C0585636") AnnotationAssertion( "VHOG:0000389") AnnotationAssertion(Annotation( "FMA:54439") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "palpebra superior") AnnotationAssertion( "superior eyelid") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001712") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "upper eyelid") AnnotationAssertion( "Eye:makeup.jpg"^^xsd:anyURI) SubClassOf( ) # Class: (lower eyelid) AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000388") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0030223693 Liem KF, Bemis WE, Walker WF, Grande L, Functional Anatomy of the Vertebrates: An Evolutionary Perspective (2001) p.431") "A tetrapod's eye usually has one or more eyelids that can move across its surface and protect and cleanse it. The eye of lissamphibians has a stationary upper eyelid but a movable and transparent lower one.[well established][VHOG]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010349") AnnotationAssertion( "EHDAA2:0001015") AnnotationAssertion( "EHDAA:9041") AnnotationAssertion( "EMAPA:17831") AnnotationAssertion( "FMA:54442") AnnotationAssertion( "MA:0001263") AnnotationAssertion( "NCIT:C49580") AnnotationAssertion( "OpenCyc:Mx4rvW6GtJwpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Lower_Eyelid") "UMLS:C0229258") AnnotationAssertion( "VHOG:0000388") AnnotationAssertion( "XAO:0000007") AnnotationAssertion( "inferior eyelid") AnnotationAssertion(Annotation( "FMA:54442") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "palpebra inferior") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001713") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "lower eyelid") AnnotationAssertion( "Eye:makeup.jpg"^^xsd:anyURI) SubClassOf( ) # Class: (cranial ganglion) AnnotationAssertion(Annotation( ) Annotation( "ISBN:0-683-40008-8"^^xsd:string) Annotation( "MGI:csmith"^^xsd:string) Annotation( "MP:0001081") "The groups of nerve cell bodies associated with the twelve cranial nerves.") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0000013") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "Ganglion which is located in the head.[TAO]") AnnotationAssertion( "UBERON:0003213") AnnotationAssertion( "UBERON:0026601") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:2597") AnnotationAssertion( "BTO:0000106") AnnotationAssertion( "EFO:0000902") AnnotationAssertion( "EMAPA:16659") AnnotationAssertion( "FMA:54502") AnnotationAssertion( "MA:0000213") AnnotationAssertion( "MA:0000214") AnnotationAssertion( "MAT:0000200") AnnotationAssertion( "MIAA:0000200") AnnotationAssertion( "TAO:0000013") AnnotationAssertion( "VHOG:0000076") AnnotationAssertion( "XAO:0000027") AnnotationAssertion( "ZFA:0000013") AnnotationAssertion( "cranial ganglion") AnnotationAssertion(Annotation( "BIRNLEX:2597") "cranial ganglion part of peripheral nervous system") AnnotationAssertion( "cranial ganglion/nerve") AnnotationAssertion( "cranial nerve ganglion") AnnotationAssertion( "cranial neural ganglion") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "cranial neural tree organ ganglion") AnnotationAssertion(Annotation( "FMA:54502") "ganglion of cranial nerve") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "ganglion of cranial neural tree organ") AnnotationAssertion( "uberon") AnnotationAssertion( "cranial ganglia") AnnotationAssertion( "head ganglion") AnnotationAssertion(Annotation( "ZFA:0000013") "presumptive cranial ganglia") AnnotationAssertion( "UBERON:0001714") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "cranial ganglion") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (oculomotor nuclear complex) AnnotationAssertion(Annotation( "BIRNLEX:1240") "Nuclear complex containing subnuclei that give rise to the axons of the occulomotor nerve, both motor and parasympathetic fibers, situated at the midline at the level of the superior colliculus in the midbrain tegmentum (Brodal, Neurological Anatomy, 3rd ed., 1981, pg 533-534).") AnnotationAssertion(Annotation( "XAO:0004389") "The nucleus of the oculomotor nerve (cranial nerve III)[XAO:0004389].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:3") AnnotationAssertion( "BAMS:III") AnnotationAssertion( "BIRNLEX:1240") AnnotationAssertion( "BM:MB-III") AnnotationAssertion( "DHBA:12198") AnnotationAssertion( "EFO:0002468") AnnotationAssertion( "EHDAA2:0004211") AnnotationAssertion( "EMAPA:35605") AnnotationAssertion( "EV:0100250") AnnotationAssertion( "FMA:54510") AnnotationAssertion( "HBA:9030") AnnotationAssertion( "MA:0001073") AnnotationAssertion( "MBA:35") AnnotationAssertion( "NCIT:C12897") AnnotationAssertion( "TAO:0000553") AnnotationAssertion(Annotation( "BIRNLEX:1240") "UMLS:C0228686") AnnotationAssertion(Annotation( "ncithesaurus:Oculomotor_Nucleus") "UMLS:C0228686") AnnotationAssertion( "VHOG:0001389") AnnotationAssertion( "XAO:0004389") AnnotationAssertion( "ZFA:0000553") AnnotationAssertion(Annotation( "BIRNLEX:1240") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=492") AnnotationAssertion(Annotation( "XAO:0004389") Annotation( ) "OM") AnnotationAssertion(Annotation( "FMA:54510") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "nucleus nervi oculomotorii") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) "nucleus nervi oculomotorii") AnnotationAssertion(Annotation( "FMA:54510") "nucleus of oculomotor nerve") AnnotationAssertion(Annotation( ) "nucleus of oculomotor nuclear complex") AnnotationAssertion(Annotation( "FMA:54510") "nucleus of third cranial nerve") AnnotationAssertion( "oculomotor III nuclear complex") AnnotationAssertion(Annotation( "MA:0001073") "oculomotor III nucleus") AnnotationAssertion(Annotation( "FMA:54510") "oculomotor nucleus") AnnotationAssertion(Annotation( "FMA:54510") "third cranial nerve nucleus") AnnotationAssertion( "uberon") AnnotationAssertion( "motor nucleus III") AnnotationAssertion( "nIII") AnnotationAssertion(Annotation( "NeuroNames:492") Annotation( ) "nucleus oculomotorius") AnnotationAssertion(Annotation( "XAO:0004389") "oculomotor motornucleus") AnnotationAssertion( "UBERON:0001715") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "oculomotor nuclear complex") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/d/da/Cn3nucleus.png"^^xsd:anyURI) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ) SubClassOf(Annotation( "ZFA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (secondary palate) AnnotationAssertion(Annotation( ) Annotation( ) "The part of the palate formed from the fusion of the two palatine shelves, extensions of the maxillary prominences.") AnnotationAssertion( "palatal") AnnotationAssertion( "present in mammals and some reptiles. A similar structure is found in crocodilians, but, in most other tetrapods, the oral and nasal cavities are not truly separate. The secondary palate is formed by bilateral medial extensions of maxillary processes. The extensions (palatine processes) meet at the midline, merging dorsally with nasal septum and rostrally with primary palate. The secondary palate (hard palate) separates nasal and oral cavities. Caudal extension of the secondary palate into the pharynx, forms a soft palate which divides the rostral pharynx into dorsal (nasopharynx) and ventral (oropharynx) chamber.") AnnotationAssertion( "separates respiratory and oral passages") AnnotationAssertion(Annotation( "EMAPA:18948") Annotation( "GO:0060021") Annotation( "MA:0002476") Annotation( ) "palate") AnnotationAssertion( "palatum") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0001779") AnnotationAssertion( "EMAPA:18948") AnnotationAssertion( "FMA:54549") AnnotationAssertion( "GAID:152") AnnotationAssertion( "MA:0002476") AnnotationAssertion( "MESH:D010159") AnnotationAssertion( "NCIT:C12229") AnnotationAssertion( "NCIT:C34292") AnnotationAssertion(Annotation( "ncithesaurus:Palate") "UMLS:C0700374") AnnotationAssertion(Annotation( "ncithesaurus:Secondary_Palate") "UMLS:C1519217") AnnotationAssertion( "galen:Palate") AnnotationAssertion(Annotation( "EMAPA:18948") "definitive palate") AnnotationAssertion( "oral roof") AnnotationAssertion(Annotation( ) Annotation( ) "palatum definitivum") AnnotationAssertion(Annotation( ) Annotation( ) "palatum secundarium") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "palatum") AnnotationAssertion( "roof of mouth") AnnotationAssertion( "UBERON:0001716") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "secondary palate") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/3/31/Pig_snout_sagittal_cut.jpg"^^xsd:anyURI) AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/d/d4/Illu01_head_neck.jpg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "EMAPA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (spinal nucleus of trigeminal nerve) AnnotationAssertion(Annotation( "NLX:12995") "Nucleus extending from the upper spinal cord through the pontine tegmentum that receives sensory inputs from the trigeminal nerve. It is continuous caudally with the dorsal gray matter of the spinal cord.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:SPV") AnnotationAssertion( "BAMS:Sp5") AnnotationAssertion( "BM:VSp") AnnotationAssertion( "DHBA:12572") AnnotationAssertion( "EMAPA:35885") AnnotationAssertion( "FMA:54565") AnnotationAssertion( "GAID:605") AnnotationAssertion( "HBA:9676") AnnotationAssertion( "MA:0001053") AnnotationAssertion( "MESH:D014279") AnnotationAssertion( "NCIT:C33188") AnnotationAssertion( "NLX:12995") AnnotationAssertion(Annotation( "ncithesaurus:Nucleus_of_the_Spinal_Tract_of_the_Trigeminal_Nerve") "UMLS:C0041000") AnnotationAssertion( "VHOG:0001357") AnnotationAssertion( "spinal nucleus of cranial nerve v") AnnotationAssertion(Annotation( "GO:0021741") "spinal trigeminal nucleus") AnnotationAssertion( "trigeminal nerve spinal tract nucleus") AnnotationAssertion( "trigeminal spinal nucleus") AnnotationAssertion( "trigeminal v spinal sensory nucleus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "nucleus spinalis nervi trigemini") AnnotationAssertion(Annotation( "BAMS:SPV") "spinal nucleus of the trigeminal") AnnotationAssertion(Annotation( "EMAPA:35885") "trigeminal spinal sensory nucleus") AnnotationAssertion( "UBERON:0001717") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "spinal nucleus of trigeminal nerve") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/3/30/Gray696.png"^^xsd:anyURI) SubClassOf(Annotation( "MA"^^xsd:string) ) SubClassOf( ) # Class: (mesencephalic nucleus of trigeminal nerve) AnnotationAssertion(Annotation( "BIRNLEX:1010") "Elongated nucleus located in the midbrain tegmentum that receives proprioceptive input from both teh extraocular and the masticatory muscles. Contrary to the general rule, the cell bodies that give rise to these sensory fibers are located within the mesencephalic nucleus rather than in a peripheral ganglion. Some of the sensory fibers in the mesencephalic root give off collaterals to the trigeminal motor nucleus, thereby providing the anatomic basis for the monosynaptic jaw reflex. (Heimer, L. The Human Brain and Spinal Cord, 2nd ed. 1996, page 248).") AnnotationAssertion(Annotation( ) "develops from NC in some species[https://github.com/obophenotype/uberon/wiki/The-neural-crest] Not of NC origin[DOI:10.1002/dvdy.1197].") AnnotationAssertion(Annotation( "NIF"^^xsd:string) "part of midbrain tegmentum in NIF and MA. the neurons of the mesencephalic trigeminal nucleus are the only centrally located primary sensory neurons in amniotes; all others are extramedullary") AnnotationAssertion(Annotation( "BIRNLEX:1010") "Me5") AnnotationAssertion(Annotation( "BIRNLEX:1010") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "Me5") AnnotationAssertion(Annotation( ) "mesencephalic nucleus") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:MEV") AnnotationAssertion( "BAMS:Me5") AnnotationAssertion( "BIRNLEX:1010") AnnotationAssertion( "BM:Pons-5ME") AnnotationAssertion( "DHBA:12208") AnnotationAssertion( "EMAPA:35881") AnnotationAssertion( "EV:0100252") AnnotationAssertion( "FMA:54568") AnnotationAssertion( "HBA:9205") AnnotationAssertion( "MA:0001057") AnnotationAssertion( "MBA:460") AnnotationAssertion( "TAO:0000312") AnnotationAssertion(Annotation( "BIRNLEX:1010") "UMLS:C0228702") AnnotationAssertion( "VHOG:0001354") AnnotationAssertion( "ZFA:0000312") AnnotationAssertion(Annotation( "BIRNLEX:1010") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=558") AnnotationAssertion( "mesencephalic trigeminal V nucleus") AnnotationAssertion(Annotation( "GO:0021739") "mesencephalic trigeminal nucleus") AnnotationAssertion( "nucleus of mesencephalic root of v") AnnotationAssertion(Annotation( "MA:0001057") "trigeminal V mesencephalic nucleus") AnnotationAssertion( "trigeminal mesencephalic nucleus") AnnotationAssertion( "trigeminal nerve mesencepahlic nucleus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "ZFA:0000312") Annotation( ) "mesencephalic nuclei of trigeminal nerves") AnnotationAssertion(Annotation( "BAMS:MEV") "mesencephalic nucleus of the trigeminal") AnnotationAssertion(Annotation( "NeuroNames:558") "mesencephalic nucleus of the trigeminal nerve") AnnotationAssertion(Annotation( "NeuroNames:558") "midbrain trigeminal nucleus") AnnotationAssertion(Annotation( "NeuroNames:558") Annotation( ) "nucleus mesencephalicus nervi trigeminalis") AnnotationAssertion(Annotation( ) Annotation( ) "nucleus mesencephalicus nervi trigemini") AnnotationAssertion(Annotation( "NeuroNames:558") Annotation( ) "nucleus tractus mesencephalici nervi trigemini") AnnotationAssertion(Annotation( "NeuroNames:558") Annotation( ) "nucleus tractus mesencephalicus nervi trigemini") AnnotationAssertion( "UBERON:0001718") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "mesencephalic nucleus of trigeminal nerve") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/3/30/Gray696.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "NIF"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (nucleus ambiguus) AnnotationAssertion(Annotation( ) "A region of histologically disparate cells located just dorsal to the inferior olivary nucleus in the lateral portion of the upper medulla. It receives upper motor neuron innervation directly via the corticobulbar tract This nucleus gives rise to the efferent motor fibers of the vagus nerve terminating in the laryngeal and pharyngeal muscles, as well as to the efferent motor fibers of the glossopharyngeal nerve (CN IX) terminating in the stylopharyngeus. [WP,unvetted].") AnnotationAssertion(Annotation( "BIRNLEX:2650") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "Amb") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:AMB") AnnotationAssertion( "BAMS:Amb") AnnotationAssertion( "BIRNLEX:2650") AnnotationAssertion( "BM:Me-AMB") AnnotationAssertion( "DHBA:12540") AnnotationAssertion( "EHDAA2:0004305") AnnotationAssertion( "EMAPA:35596") AnnotationAssertion( "EV:0100292") AnnotationAssertion( "FMA:54588") AnnotationAssertion( "HBA:9516") AnnotationAssertion( "MA:0001050") AnnotationAssertion( "MBA:135") AnnotationAssertion( "NCIT:C12835") AnnotationAssertion(Annotation( "BIRNLEX:2650") "UMLS:C0152400") AnnotationAssertion(Annotation( "ncithesaurus:Nucleus_Ambiguus") "UMLS:C0152400") AnnotationAssertion(Annotation( "BIRNLEX:2650") "UMLS:C1281211") AnnotationAssertion(Annotation( "BIRNLEX:2650") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=765") AnnotationAssertion( "ambiguus nucleus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:765") "ambiguous nucleus") AnnotationAssertion(Annotation( "NeuroNames:765") Annotation( ) "nucleus innominatus") AnnotationAssertion( "UBERON:0001719") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "nucleus ambiguus") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/9/93/Gray695.png"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "Wikipedia"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "definitional"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (cochlear nucleus) AnnotationAssertion(Annotation( ) "Any of the nuclei of the cochlear nuclear complex.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:35248") AnnotationAssertion( "FMA:54603") AnnotationAssertion( "GAID:601") AnnotationAssertion( "MA:0001012") AnnotationAssertion( "MESH:D017626") AnnotationAssertion( "NCIT:C12837") AnnotationAssertion( "TAO:0002243") AnnotationAssertion( "ZFA:0001638") AnnotationAssertion(Annotation( "MA:0001012") "cochlear VIII nucleus") AnnotationAssertion( "cochlear nucleus of acoustic nerve") AnnotationAssertion( "cochlear nucleus of eighth cranial nerve") AnnotationAssertion( "nucleus of cochlear nerve") AnnotationAssertion( "statoacoustic (VIII) nucleus") AnnotationAssertion( "uberon") AnnotationAssertion( "vestibulocochlear nucleus") AnnotationAssertion( "UBERON:0001720") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "cochlear nucleus") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/5/52/Gray691.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (inferior vestibular nucleus) AnnotationAssertion(Annotation( ) "The inferior vestibular nucleus is the vestibular nucleus which lies near the fourth ventricle. [WP,unvetted].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:IVe") AnnotationAssertion( "BAMS:SPIV") AnnotationAssertion( "BAMS:SPVN") AnnotationAssertion( "BAMS:SpVe") AnnotationAssertion( "BM:Me-VS-VSI") AnnotationAssertion( "BTO:0004369") AnnotationAssertion( "EMAPA:35797") AnnotationAssertion( "EV:0100258") AnnotationAssertion( "FMA:54608") AnnotationAssertion( "HBA:9702") AnnotationAssertion( "MA:0001054") AnnotationAssertion( "MBA:225") AnnotationAssertion( "NCIT:C33591") AnnotationAssertion(Annotation( "ncithesaurus:Spinal_Vestibular_Nucleus") "UMLS:C0175498") AnnotationAssertion(Annotation( "FMA:54608") "descending vestibular nucleus") AnnotationAssertion(Annotation( "FMA:54608") "spinal vestibular nucleus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "nucleus vestibularis inferior") AnnotationAssertion( "UBERON:0001721") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "inferior vestibular nucleus") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/6/65/Gray700.png"^^xsd:anyURI) SubClassOf( ) # Class: (medial vestibular nucleus) AnnotationAssertion(Annotation( ) "The medial vestibular nucleus is one of the vestibular nuclei. It is located in the medulla oblongata. Lateral vestibulo-spinal tract (lateral vestibular nucleus 'Deiters')- via ventrolateral medulla and spinal cord to ventral funiculus (lumbo-sacral segments). Ipsilaterally for posture Medial vestibulo-spinal tract (medial, lateral, inferior, vestibular nuclei), bilateral projection via descending medial longitudinal fasciculus to cervical segments. DESCENDING MLF. Bilaterally for head/neck/eye movements [WP,unvetted].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:MV") AnnotationAssertion( "BAMS:MVN") AnnotationAssertion( "BAMS:MVe") AnnotationAssertion( "BAMS:VMN") AnnotationAssertion( "BM:Me-VS-VSM") AnnotationAssertion( "BTO:0004371") AnnotationAssertion( "DHBA:12581") AnnotationAssertion( "EMAPA:35554") AnnotationAssertion( "FMA:54611") AnnotationAssertion( "HBA:9700") AnnotationAssertion( "MA:0001048") AnnotationAssertion( "MBA:202") AnnotationAssertion( "NCIT:C33069") AnnotationAssertion( "PBA:10125") AnnotationAssertion(Annotation( "ncithesaurus:Medial_Vestibular_Nucleus") "UMLS:C0036385") AnnotationAssertion(Annotation( "FMA:54611") "Schwalbe's nucleus") AnnotationAssertion(Annotation( "FMA:54611") "chief vestibular nucleus") AnnotationAssertion(Annotation( "FMA:54611") "dorsal vestibular nucleus") AnnotationAssertion(Annotation( "FMA:54611") "nucleus of Schwalbe") AnnotationAssertion(Annotation( "FMA:54611") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "nucleus triangularis") AnnotationAssertion(Annotation( "FMA:54611") "principal vestibular nucleus") AnnotationAssertion(Annotation( "FMA:54611") "triangular nucleus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "medial nucleus") AnnotationAssertion(Annotation( ) Annotation( ) "nucleus vestibularis medialis") AnnotationAssertion( "UBERON:0001722") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "medial vestibular nucleus") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/6/65/Gray700.png"^^xsd:anyURI) AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/d/dc/Lower_pons_horizontal_KB.svg"^^xsd:anyURI) SubClassOf( ) DisjointClasses(Annotation( "lexical"^^xsd:string) ) # Class: (tongue) AnnotationAssertion(Annotation( ) Annotation( "FEED:rd") "A muscular organ in the floor of the mouth.") AnnotationAssertion( "in MA the tongue is part of the oral region, which in uberon is treated as the oral opening. consider revising oral opening - oral region equivalence.") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000419") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( ) "A mobile mass of muscular tissue that is covered with mucous membrane, occupies much of the cavity of the mouth, forms part of its floor, bears the organ of taste, and assists in chewing and swallowing. [TFD][VHOG]") AnnotationAssertion(Annotation( "2012-07-02"^^xsd:string) Annotation( "FEED"^^xsd:string) Annotation( "http://www.feedexp.org"^^xsd:string) "Muscular organ in the floor of the mouth.[FEED]") AnnotationAssertion(Annotation( "GO:0043586") "The tongue is the movable, muscular organ on the floor of the mouth of most vertebrates, in many other mammals is the principal organ of taste, aids in the prehension of food, in swallowing, and in modifying the voice as in speech[GO][GO:0043586].") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000419") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "DOI:10.1046/j.1469-7580.2002.00073.x Iwasaki S, Evolution of the structure and function of the vertebrate tongue. J Anat (2002)") "Most adult amphibians have a tongue, as do all known reptiles, birds and mammals. Thus it is likely that the tongue appeared with the establishment of tetrapods and this structure seems to be related, to some extant, to the terrestrial lifestyle.[well established][VHOG]") AnnotationAssertion( "glossal") AnnotationAssertion( "lingual") AnnotationAssertion( "Many species of fish have small folds at the base of their mouths that might informally be called tongues, but they lack a muscular structure like the true tongues found in most tetrapods") AnnotationAssertion( "The tongue has contributions from all pharyngeal arches which changes with time. The tongue initially begins as swelling rostral to foramen cecum, the median tongue bud.. tongue muscles derive from the somites - http://php.med.unsw.edu.au/embryology/index.php?title=Tongue_Development#Pharyngeal_Arch_Contributions") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010360") AnnotationAssertion( "BTO:0001385") AnnotationAssertion( "CALOHA:TS-1050") AnnotationAssertion( "EFO:0000833") AnnotationAssertion( "EHDAA2:0002062") AnnotationAssertion( "EHDAA:9144") AnnotationAssertion( "EMAPA:17185") AnnotationAssertion( "EV:0100058") AnnotationAssertion( "FMA:54640") AnnotationAssertion( "GAID:816") AnnotationAssertion( "MA:0000347") AnnotationAssertion( "MAT:0000040") AnnotationAssertion( "MESH:D014059") AnnotationAssertion( "MIAA:0000040") AnnotationAssertion( "NCIT:C12422") AnnotationAssertion( "OpenCyc:Mx4rvVjmJ5wpEbGdrcN5Y29ycA_53KXLq9EdqAAAACs6hnmQ") AnnotationAssertion( "TAO:0005333") AnnotationAssertion(Annotation( "ncithesaurus:Tongue") "UMLS:C0040408") AnnotationAssertion( "VHOG:0000419") AnnotationAssertion( "XAO:0000446") AnnotationAssertion( "ZFA:0005333") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "glossus") AnnotationAssertion( "UBERON:0001723") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "tongue") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/a/a6/Tongue.agr.jpg"^^xsd:anyURI) SubClassOf(Annotation( "GO"^^xsd:string) ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "BTO"^^xsd:string) Annotation( "EHDAA2"^^xsd:string) Annotation( "FMA"^^xsd:string) Annotation( "ZFA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "MA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "anterior 2/3") ObjectSomeValuesFrom( )) SubClassOf(Annotation( "Wikipedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "Wikipedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "definitional"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (sphenoidal sinus) AnnotationAssertion(Annotation( ) Annotation( "MESH:A04.531.621.827") "One of the paired paranasal sinuses, located in the body of the sphenoid bone and communicating with the highest meatus of the nasal cavity on the same side[MESH]. The sphenoidal sinuses (or sphenoid) contained within the body of the sphenoid vary in size and shape; owing to the lateral displacement of the intervening septum they are rarely symmetrical. The following are their average measurements: vertical height, 2.2 cm. ; transverse breadth, 2 cm. ; antero-posterior depth, 2.2 cm. [WP,unvetted].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:54683") AnnotationAssertion( "GAID:359") AnnotationAssertion( "MA:0001795") AnnotationAssertion( "MESH:D013101") AnnotationAssertion( "NCIT:C12278") AnnotationAssertion( "OpenCyc:Mx4rwEIoz5wpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Sphenoid_Sinus") "UMLS:C0037885") AnnotationAssertion( "sphenoid sinus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "sinus sphenoidalis") AnnotationAssertion( "UBERON:0001724") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "sphenoidal sinus") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/e/e3/Gray856.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA-abduced-lr"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (cranial synchondrosis) AnnotationAssertion(Annotation( ) "The cartilaginous joints of the skull; these include sphenoethmoidal synchondrosis, sphenooccipital synchondrosis, sphenopetrosal synchondrosis, petrooccipital synchondrosis, anterior intraoccipital synchondrosis and posterior intraoccipital synchondrosis.") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:35264") AnnotationAssertion( "FMA:54816") AnnotationAssertion( "MA:0001502") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001725") AnnotationAssertion(rdfs:label "cranial synchondrosis") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (papilla of tongue) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:4102") AnnotationAssertion( "EMAPA:32777") AnnotationAssertion( "FMA:54819") AnnotationAssertion( "MA:0001593") AnnotationAssertion( "NCIT:C33258") AnnotationAssertion(Annotation( "BIRNLEX:4102") "UMLS:C0226964") AnnotationAssertion(Annotation( "ncithesaurus:Papilla_of_the_Tongue") "UMLS:C0226964") AnnotationAssertion(Annotation( "BIRNLEX:4102") "UMLS:C1289183") AnnotationAssertion( "lingual papilla") AnnotationAssertion( "tongue papilla") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001726") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "papilla of tongue") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA-modified") ObjectSomeValuesFrom( )) # Class: (taste bud) AnnotationAssertion(Annotation( ) "A specialized receptor organ that is a collection of cells spanning the gustatory epithelium.") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0010573") Annotation( "AAO"^^xsd:string) Annotation( "AAO:EJS"^^xsd:string) "A chemoreceptive organ.[AAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000130") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( ) "One of a number of receptor cell nests located in the epithelium of the papillae of the tongue and in the soft palate, epiglottis, and pharynx that mediate the sense of taste. [TFD][VHOG]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000130") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "DOI:10.1046/j.1469-7580.2001.19910133.x Graham A. The development and evolution of the pharyngeal arches. J Anat (2001)"^^xsd:string) "Experients in amphibia have shown that an intrinsic feature of the pharyngeal endoderm is its ability to generate taste buds and this capacity must have been acquired by the endoderm at the origin of the vertebrates.[well established][VHOG]") AnnotationAssertion( "In humans, saste buds may be found on the tongue, soft palatte, epiglottis and upper pharynx. In other species they may be found in more unusual places, such as the trunk, or on the barbels or fins of fish.") AnnotationAssertion( "arise by inductive interactions between epithelial cells and invading gustatory cells from chorda tympani (facial), glossophrayngeal and vagues nerves ISBN:1607950324 (todo - request cell terms from CL)") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010573") AnnotationAssertion( "BIRNLEX:4101") AnnotationAssertion( "BTO:0000989") AnnotationAssertion( "CALOHA:TS-1015") AnnotationAssertion( "EMAPA:35850") AnnotationAssertion( "FMA:54825") AnnotationAssertion( "GAID:815") AnnotationAssertion( "MA:0001591") AnnotationAssertion( "MESH:A08.800.550.700.120.800") AnnotationAssertion( "NCIT:C96518") AnnotationAssertion( "OpenCyc:Mx4rvVjan5wpEbGdrcN5Y29ycA") AnnotationAssertion( "TAO:0001074") AnnotationAssertion(Annotation( "BIRNLEX:4101") "UMLS:C0039337") AnnotationAssertion(Annotation( "ncithesaurus:Taste_Bud") "UMLS:C0039337") AnnotationAssertion( "VHOG:0000130") AnnotationAssertion( "XAO:0000445") AnnotationAssertion( "ZFA:0001074") AnnotationAssertion(Annotation( ) "tastebud") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "caliculus gustatorius") AnnotationAssertion(Annotation( ) Annotation( ) "caliculus gustatorius") AnnotationAssertion(Annotation( ) Annotation( ) "taste buds") AnnotationAssertion(Annotation( ) "taste-bud") AnnotationAssertion(Annotation( ) Annotation( ) "tastebuds") AnnotationAssertion( "UBERON:0001727") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "taste bud") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/5/5a/Gray1018.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "NIF"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (nasopharynx) AnnotationAssertion(Annotation( "MGI:cwg"^^xsd:string) Annotation( "MP:0002251") "The section of the pharynx that lies above the soft palate.") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000375") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( ) "The uppermost of the three regions of the throat (pharynx), situated behind the nasal cavity and extending from the posterior nares to the level above the soft palate. [TFD][VHOG]") AnnotationAssertion( "nasopharyngeal") AnnotationAssertion( "In humans - in front it communicates through the choanae with the nasal cavities. On its lateral wall is the pharyngeal ostium of the auditory tube, somewhat triangular in shape, and bounded behind by a firm prominence, the torus tubarius or cushion, caused by the medial end of the cartilage of the tube which elevates the mucous membrane") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0000662") AnnotationAssertion( "CALOHA:TS-0663") AnnotationAssertion( "EHDAA2:0001239") AnnotationAssertion( "EHDAA:7086") AnnotationAssertion( "EMAPA:17670") AnnotationAssertion( "EV:0100066") AnnotationAssertion( "FMA:54878") AnnotationAssertion( "GAID:339") AnnotationAssertion( "MA:0000443") AnnotationAssertion( "MAT:0000447") AnnotationAssertion( "MESH:A03.867.557") AnnotationAssertion( "NCIT:C12423") AnnotationAssertion( "OpenCyc:Mx4rwUPoDJwpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Nasopharynx") "UMLS:C0027442") AnnotationAssertion( "VHOG:0000375") AnnotationAssertion( "nasal part of pharynx") AnnotationAssertion( "rhinopharynx") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0000662") "Nasenrachenraum") AnnotationAssertion(Annotation( ) "epipharynx") AnnotationAssertion(Annotation( ) Annotation( ) "pars nasalis pharyngis") AnnotationAssertion( "UBERON:0001728") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "nasopharynx") AnnotationAssertion( "Illu:pharynx.jpg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (oropharynx) AnnotationAssertion(Annotation( "MGI:cwg"^^xsd:string) Annotation( "MP:0002252") "The portion of the pharynx that lies between the soft palate and the upper edge of the epiglottis.") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000457") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( ) "One of the three anatomic divisions of the pharynx that lies posterior to the mouth and is continuous above with the nasopharynx and below with the laryngopharynx. It extends behind the mouth from the soft palate above to the level of the hyoid bone below and contains the palatine and lingual tonsils. [TFD][VHOG]") AnnotationAssertion( "oropharyngeal") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0005257") AnnotationAssertion( "CALOHA:TS-0718") AnnotationAssertion( "EFO:0001976") AnnotationAssertion( "EHDAA2:0004082") AnnotationAssertion( "EMAPA:25094") AnnotationAssertion( "EV:0100067") AnnotationAssertion( "FMA:54879") AnnotationAssertion( "GAID:340") AnnotationAssertion( "MA:0000351") AnnotationAssertion( "MAT:0000446") AnnotationAssertion( "MESH:A03.867.603") AnnotationAssertion( "NCIT:C12762") AnnotationAssertion( "OpenCyc:Mx4rwACoxpwpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Oropharynx") "UMLS:C0521367") AnnotationAssertion( "VHOG:0000457") AnnotationAssertion( "VSAO:0000034") AnnotationAssertion( "XAO:0004048") AnnotationAssertion( "oral part of pharynx") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "mesopharynx") AnnotationAssertion(Annotation( ) Annotation( ) "pars oralis pharyngis") AnnotationAssertion( "UBERON:0001729") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "oropharynx") AnnotationAssertion( "Illu:pharynx.jpg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "ISBN:0073040584-table13.1"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (extrinsic ligament of larynx) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37627") AnnotationAssertion( "FMA:54921") AnnotationAssertion( "MA:0001756") AnnotationAssertion( "laryngeal extrinsic ligament") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001730") AnnotationAssertion(rdfs:label "extrinsic ligament of larynx") SubClassOf( ) # Class: (cavity of pharynx) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An anatomical space that is enclosed by a pharynx.") AnnotationAssertion( "See notes for pharynx - as a grouping class this is probably too bad. We exclude WBbt:0005790 (pharyngeal lumen) because of the developmental relationship") AnnotationAssertion( "TOODO check") AnnotationAssertion( ) AnnotationAssertion( "AAO:0010435") AnnotationAssertion( "BSA:0000113") AnnotationAssertion( "BTO:0002097") AnnotationAssertion( "EMAPA:18381") AnnotationAssertion( "FMA:54935") AnnotationAssertion( "XAO:0000105") AnnotationAssertion( "lumen of pharynx") AnnotationAssertion( "pharyngeal cavity") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "cavitas pharyngealis") AnnotationAssertion(Annotation( "BTO:0002097") "cavitas pharyngis") AnnotationAssertion( "UBERON:0001731") AnnotationAssertion(rdfs:label "cavity of pharynx") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "XAO"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pharyngeal tonsil) AnnotationAssertion(Annotation( "MGI:cwg"^^xsd:string) Annotation( "MP:0002384") "The lymph tissue in the roof and posterior wall of the nasopharynx.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0000777") AnnotationAssertion( "EV:0100054") AnnotationAssertion( "FMA:54970") AnnotationAssertion( "GAID:1288") AnnotationAssertion( "MA:0000774") AnnotationAssertion( "MESH:A15.382.520.604.084") AnnotationAssertion( "NCIT:C33318") AnnotationAssertion(Annotation( "ncithesaurus:Pharyngeal_Tonsil") "UMLS:C0001428") AnnotationAssertion( "adenoid") AnnotationAssertion( "nasopharyngeal tonsil") AnnotationAssertion( "tonsil of Luschka") AnnotationAssertion(Annotation( "FMA:54970") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "tonsilla pharyngealis") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0000777") "Rachenmandel") AnnotationAssertion(Annotation( ) Annotation( ) "tonsilla pharyngea") AnnotationAssertion( "UBERON:0001732") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "pharyngeal tonsil") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/b/be/Gray994-adenoid.png"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "cjm"^^xsd:string) ) # Class: (soft palate) AnnotationAssertion(Annotation( ) Annotation( ) Annotation( "GO:0060023") Annotation( "UBERON:cjm"^^xsd:string) "The muscular, non-bony arch-shaped posterior portion of the palate extending from the posterior edge of the hard palate.") AnnotationAssertion(Annotation( "GOC:fmc") ) AnnotationAssertion(Annotation( "2012-07-02"^^xsd:string) Annotation( "FEED"^^xsd:string) Annotation( "http://www.feedexp.org"^^xsd:string) "A muscular arch-shaped structure that is composed of the musculus uvuli and parts of tensor veli palatini, levator veli palatini, palatoglossus and palatopharyngeus and attaches to the hard palate and modulates the connections between the oral cavity and pharynx soft tissue arch .[FEED]") AnnotationAssertion( "velar") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0005405") AnnotationAssertion( "EMAPA:18949") AnnotationAssertion( "FMA:55021") AnnotationAssertion( "GAID:1284") AnnotationAssertion( "MA:0002412") AnnotationAssertion( "MAT:0000039") AnnotationAssertion( "MESH:D010160") AnnotationAssertion( "MIAA:0000039") AnnotationAssertion( "NCIT:C12231") AnnotationAssertion(Annotation( "ncithesaurus:Soft_Palate") "UMLS:C0030219") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "muscular palate") AnnotationAssertion(Annotation( ) Annotation( ) "palatum molle") AnnotationAssertion(Annotation( ) "velum") AnnotationAssertion(Annotation( ) Annotation( ) "velum palatinum") AnnotationAssertion( "UBERON:0001733") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "soft palate") AnnotationAssertion( "Tonsils:diagram.jpg"^^xsd:anyURI) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf(Annotation( "MA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (palatine uvula) AnnotationAssertion(Annotation( ) "Conic projection from the posterior edge of the middle of the soft palate, composed of connective tissue containing a number of racemose glands, and some muscular fibers.") AnnotationAssertion(Annotation( ) "In a study of eight mammals a small underdeveloped uvula was found only in baboons") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0002204") AnnotationAssertion( "EFO:0001386") AnnotationAssertion( "FMA:55022") AnnotationAssertion( "GAID:1285") AnnotationAssertion( "MESH:D014609") AnnotationAssertion( "NCIT:C12232") AnnotationAssertion(Annotation( "ncithesaurus:Uvula") "UMLS:C0042173") AnnotationAssertion( "palatine uvula") AnnotationAssertion(Annotation( "FMA:55022") "uvula") AnnotationAssertion( "uvula of palate") AnnotationAssertion(Annotation( "FMA:55022") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "uvula palatina") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "uvula palatina") AnnotationAssertion( "UBERON:0001734") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "seeAlso - bifid uvula and cleft palate") AnnotationAssertion(rdfs:label "palatine uvula") AnnotationAssertion( "Tonsils:diagram.jpg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses( ) # Class: (tonsillar ring) AnnotationAssertion(Annotation( "MGI:cwg"^^xsd:string) Annotation( "MP:0002379") "The circular lymphoid tissue formed by the lingual, pharyngeal, and facial tonsils.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:55070") AnnotationAssertion( "MA:0000752") AnnotationAssertion( "NCIT:C73468") AnnotationAssertion(Annotation( "ncithesaurus:Waldeyers_Tonsillar_Ring") "UMLS:C0459892") AnnotationAssertion( "Waldeyer's ring") AnnotationAssertion( "Waldeyer's tonsillar ring") AnnotationAssertion(Annotation( "FMA:55070") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "anulus lymphoideus pharyngis") AnnotationAssertion( "oropharyngeal lymphoid tissue") AnnotationAssertion( "pharyngeal lymphatic ring") AnnotationAssertion( "pharyngeal lymphoid ring") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001735") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "tonsillar ring") AnnotationAssertion(rdfs:seeAlso ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (submandibular gland) AnnotationAssertion(Annotation( ) Annotation( "MGI:anna"^^xsd:string) "Either of the paired compound tubuloalveolar (aka tubuloacinar) major salivary glands composed of both serous and mucous secretory cells and situated beneath the mandible.") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000364") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( ) "Either of two major salivary glands situated in the neck near the lower edge of each side of the mandible and emptying into the submandibular duct. [TFD][VHOG]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000364") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0072528305 Kardong KV, Vertebrates: Comparative Anatomy, Function, Evolution (2006) p.525") "The most common oral glands in mammals are the salivary glands. There are usually three primary pairs of salivary glands, named for their approximate positions: mandibular (submandibular or submaxillary), sublingual, and parotid.[well established][VHOG]") AnnotationAssertion( "In humans, they account for 70% of the salivary volume and weigh about 15 grams. [WP,unvetted]") AnnotationAssertion(Annotation( "ISBN:0123813611"^^xsd:string) "In mouse, multilobed and lobulated, on the ventral midline of the neck") AnnotationAssertion( "in mice, submandibular gland development initiates as a thickening of the oral epithelium; around E12 an initial (single) epithelial bud on a stalk grows into a condensing neural crest-derived mesenchyme; clefts in the epithelium result in 3-5 epithelial buds at E13.5, and branching morphogenesis occurs with continued proliferation, successive rounds of cleft formation, duct elongation, and duct lumen formation, so that by E14 the gland is highly branched (multi-lobed); functional differentiation, with the appearance of proacinar cells and secretory products begins after E15 and continues to birth; acinar differentiation continues postnatally with final differentiation of the granular convoluted tubules at puberty[MGI:anna]") AnnotationAssertion( "The submandibular is the first major salivary gland to develop in the embryo, followed by the neighbouring sublingual and then the parotid.[PMID:17336109]") AnnotationAssertion( "The term submandibular as used in humans, is incorrect due the difference in topography of these structures[http://www.avdc.org]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0001316") AnnotationAssertion( "CALOHA:TS-0988") AnnotationAssertion( "EFO:0001387") AnnotationAssertion( "EMAPA:18812") AnnotationAssertion( "EV:0100061") AnnotationAssertion( "FMA:55093") AnnotationAssertion( "GAID:942") AnnotationAssertion( "MA:0001589") AnnotationAssertion( "MESH:D013363") AnnotationAssertion( "NCIT:C12233") AnnotationAssertion(Annotation( "ncithesaurus:Submandibular_Gland") "UMLS:C0038556") AnnotationAssertion( "VHOG:0000364") AnnotationAssertion(Annotation( ) Annotation( ) "mandibular gland") AnnotationAssertion(Annotation( ) Annotation( ) "mandibular salivary gland") AnnotationAssertion( "submandibular salivary gland") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "glandula submandibularis") AnnotationAssertion( "maxillary gland") AnnotationAssertion( "submaxillary gland") AnnotationAssertion( "UBERON:0001736") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "lobular, sexually dimorphic in mouse") AnnotationAssertion(rdfs:label "submandibular gland") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/5/51/Illu_quiz_hn_02.jpg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA-abduced-lr"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (larynx) AnnotationAssertion(Annotation( ) Annotation( ) "A continuation of the pharynx that is involved in breathing, sound production, and protecting the trachea against food aspiration.") AnnotationAssertion(Annotation( "2012-07-02"^^xsd:string) Annotation( "FEED"^^xsd:string) Annotation( "http://www.feedexp.org"^^xsd:string) "An anatomical cluster consisting of the epiglottus, the arytenoid cartilages, the thyroid cartilage, the cricoid cartilage and the muscles, membranes, and ligaments connecting them, and also of the mucosal covering these structures.[FEED]") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0000268") Annotation( "AAO"^^xsd:string) Annotation( "AAO:BJB"^^xsd:string) "Anatomical structure consisting of a narrowly triangular chamber supported by a series of semicircular cartilages in which part of the sound-production system is located.[AAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001279") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0471090588 Hildebrand M, Analysis of vertebrate structure (1983) p.239-241") "(In anura) a dorsal pair of arytenoid cartilages (...), which support vocal cords, and a ventral pair (often fused) of cricoid cartilage (...). These cartilages are regarded as derivatives of posterior visceral arches of ancestors. Together they constitute the larynx, a structure characteristic of tetrapods. (...) (In mammals) Paired arytenoid cartilages help support and control the vocal cords. The cricoid cartilage is single. Two additional cartilages are present that are lacking in other vertebrates: a large ventral thyroid cartilage (...) and a cartilage in the epiglottis.[well established][VHOG]") AnnotationAssertion( "laryngeal") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0000268") AnnotationAssertion( "BTO:0001208") AnnotationAssertion( "CALOHA:TS-0532") AnnotationAssertion( "EFO:0000838") AnnotationAssertion( "EHDAA2:0004063") AnnotationAssertion( "EMAPA:18333") AnnotationAssertion( "EV:0100039") AnnotationAssertion( "FMA:55097") AnnotationAssertion( "GAID:108") AnnotationAssertion( "MA:0000414") AnnotationAssertion( "MAT:0000187") AnnotationAssertion( "MESH:D007830") AnnotationAssertion( "MIAA:0000187") AnnotationAssertion( "NCIT:C12420") AnnotationAssertion( "OpenCyc:Mx4rvViOnZwpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Larynx") "UMLS:C0023078") AnnotationAssertion( "VHOG:0001279") AnnotationAssertion( "XAO:0003081") AnnotationAssertion( "galen:Larynx") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001737") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "larynx") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/8/8a/Larynx_external_en.svg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (thyroid cartilage) AnnotationAssertion(Annotation( "ISBN:0-397-51047-0") Annotation( "MGI:cwg"^^xsd:string) Annotation( "MP:0002260") "The largest of the laryngeal cartilages.") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001365") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( ) "The largest cartilage of the larynx, having two broad processes that join anteriorly to form the Adam's apple. [TFD][VHOG]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001365") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0471090588 Hildebrand M, Analysis of vertebrate structure (1983) p.239-241") "[In anura] a dorsal pair of arytenoid cartilages (...), which support vocal cords, and a ventral pair (often fused) of cricoid cartilage (...). These cartilages are regarded as derivatives of posterior visceral arches of ancestors. Together they constitute the larynx, a structure characteristic of tetrapods. (...) [In mammals] Paired arytenoid cartilages help support and control the vocal cords. The cricoid cartilage is single. Two additional cartilages are present that are lacking in other vertebrates: a large ventral thyroid cartilage (...) and a cartilage in the epiglottis.[well established][VHOG]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0003655") AnnotationAssertion( "EHDAA2:0002030") AnnotationAssertion( "EHDAA:9395") AnnotationAssertion( "EMAPA:18698") AnnotationAssertion( "FMA:55099") AnnotationAssertion( "GAID:112") AnnotationAssertion( "MA:0001764") AnnotationAssertion( "MESH:A02.165.507.870") AnnotationAssertion( "NCIT:C33780") AnnotationAssertion(Annotation( "ncithesaurus:Thyroid_Cartilage") "UMLS:C0040126") AnnotationAssertion( "VHOG:0001365") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "cartilago thyroidea") AnnotationAssertion(Annotation( ) Annotation( ) "cartilago thyroidea") AnnotationAssertion(Annotation( ) "laryngeal prominence") AnnotationAssertion(Annotation( ) "pomus") AnnotationAssertion(Annotation( ) "pomus adamus") AnnotationAssertion( "UBERON:0001738") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "thyroid cartilage") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/8/8a/Larynx_external_en.svg"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (laryngeal cartilage) AnnotationAssertion(Annotation( "MP:0002256") "The cartilaginous structures that support the larynx.") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001550") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0471090588 Hildebrand M, Analysis of vertebrate structure (1983) p.239-241") "(In anura) a dorsal pair of arytenoid cartilages (...), which support vocal cords, and a ventral pair (often fused) of cricoid cartilage (...). These cartilages are regarded as derivatives of posterior visceral arches of ancestors. Together they constitute the larynx, a structure characteristic of tetrapods. (...) (In mammals) Paired arytenoid cartilages help support and control the vocal cords. The cricoid cartilage is single. Two additional cartilages are present that are lacking in other vertebrates: a large ventral thyroid cartilage (...) and a cartilage in the epiglottis.[well established][VHOG]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0003660") AnnotationAssertion( "EHDAA:8157") AnnotationAssertion( "EMAPA:18697") AnnotationAssertion( "FMA:55108") AnnotationAssertion( "GAID:107") AnnotationAssertion( "MA:0001758") AnnotationAssertion( "MESH:A02.165.507") AnnotationAssertion( "NCIT:C12281") AnnotationAssertion(Annotation( "ncithesaurus:Laryngeal_Cartilage") "UMLS:C0023050") AnnotationAssertion( "VHOG:0001550") AnnotationAssertion(Annotation( "FMA:55108") "cartilage of larynx") AnnotationAssertion(Annotation( ) "cartilagines laryngeales") AnnotationAssertion(Annotation( "VHOG:0001550") "larynx cartilage") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001739") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "laryngeal cartilage") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (arytenoid cartilage) AnnotationAssertion(Annotation( "ISBN:0-397-51047-0") Annotation( "MGI:cwg"^^xsd:string) Annotation( "MP:0002257") "The paired triangular laryngeal cartilages located postlaterally at the level of the thyroid cartilage.") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0000674") Annotation( "AAO"^^xsd:string) Annotation( "AAO:LAP"^^xsd:string) "Paired, anteroposteriorly elongated cartilages that are associated with the vocal cords. These cartilages are medially separated and hemispherical, and their concave side faces ventromedially.[AAO]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0000674") AnnotationAssertion( "EMAPA:17977") AnnotationAssertion( "EMAPA:18695") AnnotationAssertion( "FMA:55109") AnnotationAssertion( "GAID:109") AnnotationAssertion( "MA:0001759") AnnotationAssertion( "MESH:A02.165.507.083") AnnotationAssertion( "NCIT:C32148") AnnotationAssertion(Annotation( "ncithesaurus:Arytenoid_Cartilage") "UMLS:C0003943") AnnotationAssertion(Annotation( "EMAPA:18695") "arytenoid") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "arytenoids") AnnotationAssertion(Annotation( ) Annotation( ) "cartilagines arytenoidea") AnnotationAssertion(Annotation( "AAO:0000674") "cartilago arytaenoidea") AnnotationAssertion( "cartilago arytenoidea") AnnotationAssertion( "UBERON:0001740") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "arytenoid cartilage") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/f/fa/Gray950.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "cjm"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (corniculate cartilage) AnnotationAssertion(Annotation( ) "The corniculate cartilages (cartilages of Santorini) are two small conical nodules consisting of yellow elastic cartilage, which articulate with the summits of the arytenoid cartilages and serve to prolong them posteriorly and medially. They are situated in the posterior parts of the aryepiglottic folds of mucous membrane, and are sometimes fused with the arytenoid cartilages. [WP,unvetted].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37484") AnnotationAssertion( "FMA:55110") AnnotationAssertion( "MA:0001885") AnnotationAssertion( "NCIT:C32373") AnnotationAssertion(Annotation( "ncithesaurus:Corniculate_Cartilage") "UMLS:C0225556") AnnotationAssertion( "Santorini's cartilage") AnnotationAssertion( "cartilage of Santorini") AnnotationAssertion(Annotation( ) Annotation( ) "cartilagines corniculata") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001741") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "corniculate cartilage") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/5/56/Gray952.png"^^xsd:anyURI) SubClassOf(Annotation( "MA"^^xsd:string) ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (epiglottic cartilage) AnnotationAssertion(Annotation( "MP:0002259") "The most superior of the laryngeal cartilages, which is found at the root of the tongue and folds back over the entrance to the larynx during swallowing.") AnnotationAssertion(Annotation( "MP") "laryngeal cartilage in MP") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37522") AnnotationAssertion( "FMA:55112") AnnotationAssertion( "MA:0001763") AnnotationAssertion( "NCIT:C32526") AnnotationAssertion(Annotation( "ncithesaurus:Epiglottic_Cartilage") "UMLS:C0458526") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001742") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "epiglottic cartilage") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (ligament of larynx) AnnotationAssertion(Annotation( ) "A ligament that is part of a larynx and connexts the cartilages of the larynx.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37626") AnnotationAssertion( "FMA:55131") AnnotationAssertion( "MA:0001755") AnnotationAssertion( "NCIT:C32933") AnnotationAssertion(Annotation( "ncithesaurus:Laryngeal_Ligament") "UMLS:C0458519") AnnotationAssertion( "laryngeal ligament") AnnotationAssertion(Annotation( "MA:0001755") "larynx ligament") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001743") AnnotationAssertion(rdfs:label "ligament of larynx") SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lymphoid tissue) AnnotationAssertion(Annotation( ) "Portion of connective tissue with various types of white blood cells enmeshed in it, most numerous being the lymphocytes[WP].") AnnotationAssertion(Annotation( "lampreys lack organized lymphoid tissue") Annotation( "NCBIBook:NBK27108") ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0000753") AnnotationAssertion( "CALOHA:TS-0584") AnnotationAssertion( "FMA:55220") AnnotationAssertion( "GAID:342") AnnotationAssertion( "MA:0002436") AnnotationAssertion( "MESH:D008221") AnnotationAssertion( "NCIT:C13049") AnnotationAssertion(Annotation( "ncithesaurus:Lymphoid_Tissue") "UMLS:C0024296") AnnotationAssertion( "galen:LymphoidTissue") AnnotationAssertion( "lymphatic tissue") AnnotationAssertion( "lymphocytic tissue") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001744") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "lymphoid tissue") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (secondary nodular lymphoid tissue) AnnotationAssertion(Annotation( "CL:tm") "A lymphoid follicle that contains a germinal center.") AnnotationAssertion( "FMA:55224") AnnotationAssertion( "GAID:946") AnnotationAssertion( "peripheral lymphoid tissue") AnnotationAssertion( "secondary lymphoid nodule") AnnotationAssertion( "secondary lymphoid tissue") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001745") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "secondary nodular lymphoid tissue") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/2/2f/Keimzentrum.jpg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (capsule of thyroid gland) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37767") AnnotationAssertion( "FMA:55513") AnnotationAssertion( "MA:0002675") AnnotationAssertion( "NCIT:C33781") AnnotationAssertion(Annotation( "ncithesaurus:Thyroid_Gland_Capsule") "UMLS:C0229575") AnnotationAssertion(Annotation( "FMA:55513") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "capsula fibrosa glandulae thyroideae") AnnotationAssertion(Annotation( "FMA:55513") "fibrous capsule of thyroid gland") AnnotationAssertion( "thyroid capsule") AnnotationAssertion(Annotation( "MA:0002675") "thyroid gland capsule") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001746") AnnotationAssertion(rdfs:label "capsule of thyroid gland") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (parenchyma of thyroid gland) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A parenchyma that is part of a thyroid follicle [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( "BTO:0004579") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37769") AnnotationAssertion( "FMA:55515") AnnotationAssertion( "MA:0000730") AnnotationAssertion(Annotation( "OBOL:accepted"^^xsd:string) "parenchyma of thyroid") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "parenchyma of thyroid follicle") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "parenchyma of thyroid gland follicle") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "thyroid follicle parenchyma") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "thyroid gland follicle parenchyma") AnnotationAssertion( "thyroid gland parenchyma") AnnotationAssertion(Annotation( "OBOL:accepted"^^xsd:string) "thyroid parenchyma") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0004579") "parenchyma glandulae thyroideae") AnnotationAssertion( "UBERON:0001747") AnnotationAssertion(rdfs:label "parenchyma of thyroid gland") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (capsule of parathyroid gland) AnnotationAssertion(Annotation( "MGI:anna"^^xsd:string) "The dense and irregular connective tissue capsule surrounding a parathyroid gland.") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:35663") AnnotationAssertion( "FMA:55566") AnnotationAssertion( "MA:0002676") AnnotationAssertion( "NCIT:C33265") AnnotationAssertion(Annotation( "ncithesaurus:Parathyroid_Gland_Capsule") "UMLS:C0927176") AnnotationAssertion( "parathyroid gland capsule") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001748") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "capsule of parathyroid gland") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "MA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (parenchyma of parathyroid gland) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A parenchyma that is part of a parathyroid gland [Automatically generated definition].") AnnotationAssertion( "EMAPA:35664") AnnotationAssertion( "FMA:55569") AnnotationAssertion( "MA:0002677") AnnotationAssertion( "parathyroid gland parenchyma") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "parathyroid parenchyma") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "parenchyma of parathyroid") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001749") AnnotationAssertion(rdfs:label "parenchyma of parathyroid gland") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (lacrimal apparatus) AnnotationAssertion(Annotation( "MGI:anna"^^xsd:string) "A network of orbital structures of the eye that secrete and drain tears from the surface of the eyeball into the nasal cavity; these parts include the lacrimal glands, lacrimal lake, lacrimal ducts, lacrimal canals, lacrimal sacs, nasolacrimal ducts, and lacrimal puncta.") AnnotationAssertion( "TODO - resolve canaliculus vs tear duct vs lacrimal vs nasolacrimal") AnnotationAssertion(Annotation( "ncit"^^xsd:string) "this is an eye appendage in ncit, along with eyelid and eyebrow. in MA, part of eye surface part_of eye") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:35462") AnnotationAssertion( "FMA:55605") AnnotationAssertion( "GAID:901") AnnotationAssertion( "MA:0000274") AnnotationAssertion( "MESH:D007765") AnnotationAssertion( "NCIT:C32905") AnnotationAssertion(Annotation( "ncithesaurus:Lacrimal_Apparatus") "UMLS:C0022903") AnnotationAssertion(Annotation( ) Annotation( ) "apparatus lacrimalis") AnnotationAssertion(Annotation( "MGI:anna"^^xsd:string) "lacrymal system") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "lacrimal drainage system") AnnotationAssertion(Annotation( ) "nasolacrimal drainage system") AnnotationAssertion(Annotation( "HPO:pr") "nasolacrimal system") AnnotationAssertion( "UBERON:0001750") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "lacrimal apparatus") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/c/cf/Gray896.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "MA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "HPO:pr") ObjectSomeValuesFrom( )) SubClassOf(Annotation( "ISBN:0781772214") ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (dentine) AnnotationAssertion(Annotation( ) Annotation( "GO_REF:0000034"^^xsd:string) Annotation( "PSPUB:0000170"^^xsd:string) Annotation( "VSAO:0000069") "Collagen-rich odontogenic tissue characteristic of teeth and tooth-like skeletal elements (e.g., odontodes); mature dentine is mineralized and develops from predentine tissue; often (but not always) tubular and acellular.") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0005143") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "Mineralized collagen containing substance that forms the tooth structure.[TAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001589") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "DOI:10.1111/j.1469-7580.2012.01495.x Hall BK, Gillis JA, Incremental evolution of the neural crest, neural crest cells and neural crest-derived skeletal tissues. J Anat (2012)") "Dentine is a bona fide vertebrate novelty, and dentine-secreting odontoblasts represent a cell type that is exclusively derived from the neural crest.[well established][VHOG]") AnnotationAssertion( "dentinal") AnnotationAssertion( "Dentine is found in the fossil record as early as the late Cambrian, in fish, where it may have had a role in electrochemical sensing of the environment as well as assisting in defense[WP]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0003453") AnnotationAssertion( "EMAPA:35281") AnnotationAssertion( "FMA:55628") AnnotationAssertion( "GAID:1272") AnnotationAssertion( "MA:0002542") AnnotationAssertion( "MESH:A14.254.900.280") AnnotationAssertion( "NCIT:C32453") AnnotationAssertion( "TAO:0005143") AnnotationAssertion(Annotation( "ncithesaurus:Dentin") "UMLS:C0011429") AnnotationAssertion( "VHOG:0001589") AnnotationAssertion( "VSAO:0000069") AnnotationAssertion( "XAO:0004051") AnnotationAssertion( "ZFA:0005143") AnnotationAssertion(Annotation( "MA:0002542") "dentin") AnnotationAssertion(Annotation( "ZFA:0005143") "dentin") AnnotationAssertion( "dentine of tooth") AnnotationAssertion(Annotation( "GO:0070468") "predentin") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001751") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:comment ".") AnnotationAssertion(rdfs:label "dentine") SubClassOf(Annotation( "VSAO"^^xsd:string) ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "VSAO"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (enamel) AnnotationAssertion(Annotation( ) Annotation( "ZFIN:curator"^^xsd:string) "A dentine-like hypermineralized substance that covers the tooth tip. Enamel's primary mineral is hydroxylapatite, which is a crystalline calcium phosphate. Unlike dentin and bone, enamel does not contain collagen. Instead, it has two unique classes of proteins called amelogenins and enamelins[WP].") AnnotationAssertion( "current classification under substance of tooth may be turned into taxon GCI (e.g. sharks have enamel in dermal denticles)") AnnotationAssertion(Annotation( ) ) AnnotationAssertion(Annotation( ) ) AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "VSAO:0000065") Annotation( "VSAO"^^xsd:string) Annotation( "PSPUB:0000170"^^xsd:string) "Skeletal tissue that consists of an avascular, noncollagenous, hypermineralized matrix that is deposited by ameloblasts that are excluded from the matrix. Enamel develops from organic pre-enamel tissue that is replaced by a largely inorganic matrix.[VSAO]") AnnotationAssertion(Annotation( "MA"^^xsd:string) "part_of tooth enamel organ in MA") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0001844") AnnotationAssertion( "CALOHA:TS-1057") AnnotationAssertion( "EMAPA:35303") AnnotationAssertion( "FMA:55629") AnnotationAssertion( "MA:0002543") AnnotationAssertion( "MESH:A14.254.900.255") AnnotationAssertion( "NCIT:C32505") AnnotationAssertion(Annotation( "ncithesaurus:Enamel") "UMLS:C0011350") AnnotationAssertion( "VSAO:0000065") AnnotationAssertion( "XAO:0004198") AnnotationAssertion( "enamel of tooth") AnnotationAssertion(Annotation( "VSAO:curator"^^xsd:string) "enamel tissue") AnnotationAssertion( "tooth enamel") AnnotationAssertion( "uberon") AnnotationAssertion( "enameloid") AnnotationAssertion( "UBERON:0001752") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "enamel") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/6/66/Enamelorgan11-17-05.jpg"^^xsd:anyURI) SubClassOf(Annotation( "VSAO"^^xsd:string) ) SubClassOf( ) SubClassOf(Annotation( "VSAO"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (cementum) AnnotationAssertion(Annotation( ) Annotation( "GO_REF:0000034"^^xsd:string) Annotation( "PSPUB:0000170"^^xsd:string) Annotation( "VSAO:0000062") "Odontoid tissue that is deposited by cementoblasts onto dentine tissue and functions to attach teeth, odontodes and other odontogenic derivatives to bone tissue and the integument.") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "VSAO:0000062") Annotation( "VSAO"^^xsd:string) Annotation( "PSPUB:0000170"^^xsd:string) "Odontoid tissue that is deposited by cementoblasts onto dentine tissue and functions to attach teeth, odontodes and other odontogenic derivatives to bone tissue and the integument.[VSAO]") AnnotationAssertion(Annotation( "FMA:55630") "Substance of tooth produced by cementoblasts; surrounds the dentine of the root of the tooth[FMA:55630].") AnnotationAssertion( "Cementum, the supporting tissue that anchors mammalian and crocodylian teeth into their sockets, differs among species and can have features of dentine, of bone, and of calcified cartilage, as well as unique features. Cementum is deposited by cementoblasts onto existing dentine. As in bone and dentine, cementoblasts produce an organic matrix, the main constituent of which is collagen type I (Bosshardt, 2005), but cementum, dentine, and bone also share a number of important noncollagenous matrix components such as osteopontin, osteocalcin, bone sialoprotein, a2-HS- glycoprotein, dentine matrix protein, dentine sialoprotein, and den- tine phosphoprotein (McKee et al., 1996; Bosshardt, 2005). it has been argued that in all rodents and ruminants, cementum is a form of calcified cartilage[H&W]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0002525") AnnotationAssertion( "CALOHA:TS-2163") AnnotationAssertion( "EMAPA:35203") AnnotationAssertion( "FMA:55630") AnnotationAssertion( "MA:0002541") AnnotationAssertion( "MESH:A14.254.646.267") AnnotationAssertion( "NCIT:C32276") AnnotationAssertion(Annotation( "ncithesaurus:Cementum") "UMLS:C0011343") AnnotationAssertion( "VSAO:0000062") AnnotationAssertion( "XAO:0004196") AnnotationAssertion(Annotation( "FMA:55630") "cement") AnnotationAssertion( "cement of tooth") AnnotationAssertion( "cementum") AnnotationAssertion( "cementum of tooth") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "VSAO:0000062") "bone of attachment") AnnotationAssertion( "UBERON:0001753") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "cementum") AnnotationAssertion( "The:Periodontium.jpg"^^xsd:anyURI) SubClassOf(Annotation( "VSAO"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (dental pulp) AnnotationAssertion(Annotation( ) "The part in the center of a tooth made up of living soft tissue and cells called odontoblasts[WP].") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0005141") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "Material in the center of the dentine of the mature tooth. In secondary teeth the pulp contains blood vessels and odontoblast.[TAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001469") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "DOI:10.1038/nature07304 Soukup V, Epperlein HH, Horacek I, Cerny R, Dual epithelial origin of vertebrate oral teeth. Nature (2008), DOI:10.1186/1471-2148-11-307 The homology of odontodes in gnathostomes: insights from Dlx gene expression in the dogfish, Scyliorhinus canicula. BMC Evolutionary Biology (2011)") "The oral cavity of vertebrates is generally thought to arise as an ectodermal invagination. Consistent with this, oral teeth are proposed to arise exclusively from ectoderm, contributing to tooth enamel epithelium, and from neural crest derived mesenchyme, contributing to dentin and pulp (reference 1); Teeth and tooth-like structures, together named odontodes, are repeated organs thought to share a common evolutionary origin. These structures can be found in gnathostomes at different locations along the body: oral teeth in the jaws, teeth and denticles in the oral-pharyngeal cavity, and dermal denticles on elasmobranch skin (reference 2).[uncertain][VHOG]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0000339") AnnotationAssertion( "CALOHA:TS-0195") AnnotationAssertion( "EMAPA:35274") AnnotationAssertion( "FMA:55631") AnnotationAssertion( "GAID:1270") AnnotationAssertion( "MA:0001599") AnnotationAssertion( "MESH:A14.254.900.260") AnnotationAssertion( "NCIT:C32451") AnnotationAssertion( "TAO:0005141") AnnotationAssertion(Annotation( "ncithesaurus:Dental_Pulp") "UMLS:C0011399") AnnotationAssertion( "VHOG:0001469") AnnotationAssertion( "ZFA:0005141") AnnotationAssertion( "pulp of tooth") AnnotationAssertion(Annotation( "ZFA:0005141") "tooth pulp") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0000339") "dental pulp cell") AnnotationAssertion( "UBERON:0001754") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "dental pulp") AnnotationAssertion( "Tooth:Section.svg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "ZFA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (distal part of styloid process of temporal bone) AnnotationAssertion(Annotation( ) "A segment in the hyoidean arch between the epihyal and tympanohyal[biology-online]. The interhyal is a small rod-like element that connects the ventral and dorsal parts of the hyoid arch. It articulates laterally with the posterior end of the epihyal and medially at the cartilaginous junction between the hyomandibula and the symplectic. It remains cartilaginous in adult zebrafish and other cypriniforms[ZFA].") AnnotationAssertion( "TODO - check") AnnotationAssertion(Annotation( "FMA:56472") "stylohyal") AnnotationAssertion( "FMA:56472") AnnotationAssertion( "MFMO:0000053") AnnotationAssertion(Annotation( "FMA:56472") "distal part of styloid process") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "MFMO:0000053") "stylohyal bone") AnnotationAssertion( "UBERON:0001755") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "distal part of styloid process of temporal bone") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (middle ear) AnnotationAssertion(Annotation( ) Annotation( "GO:0042474") "The middle ear is the air-filled cavity within the skull of vertebrates that lies between the outer ear and the inner ear. It is linked to the pharynx (and therefore to outside air) via the Eustachian tube and in mammals contains the three ear ossicles, which transmit auditory vibrations from the outer ear (via the tympanum) to the inner ear (via the oval window)[GO].") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000312") Annotation( "VHOG"^^xsd:string) Annotation( ) "The intermediate portion of the ear which consists of a small air-filled and membrane-lined chamber. It is lodged in the temporal bone and continues with the nasopharynx through the Eustachian tube. It is separated from the external ear by the tympanic membrane and from the inner ear by the fenestrae. [Dorian_AF, Elsevier's_encyclopaedic_dictionary_of_medicine, Part_B:_Anatomy_(1988)_Amsterdam_etc.:_Elsevier][VHOG]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000312") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0030223693 Liem KF, Bemis WE, Walker WF, Grande L, Functional Anatomy of the Vertebrates: An Evolutionary Perspective (2001) p.417") "The tympanic cavity and auditory tube of an amniote develop from the first embryonic pharyngeal pouch, so they are homologous to the first gill pouch, or spiracle, of a fish. We are uncertain whether this homology strictly applies to the middle ear cavity and auditory tube of lissamphibians, which show certain peculiarities in their development.[uncertain][VHOG]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0011065") AnnotationAssertion( "BIRNLEX:1695") AnnotationAssertion( "BTO:0002099") AnnotationAssertion( "CALOHA:TS-2233") AnnotationAssertion( "EHDAA2:0001181") AnnotationAssertion( "EHDAA:5693") AnnotationAssertion( "EMAPA:17000") AnnotationAssertion( "EV:0100357") AnnotationAssertion( "FMA:56513") AnnotationAssertion( "GAID:165") AnnotationAssertion( "MA:0000253") AnnotationAssertion( "MAT:0000146") AnnotationAssertion( "MESH:D004432") AnnotationAssertion( "MIAA:0000146") AnnotationAssertion( "NCIT:C12274") AnnotationAssertion( "OpenCyc:Mx4rvbw1j5wpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "BIRNLEX:1695") "UMLS:C0013455") AnnotationAssertion(Annotation( "ncithesaurus:Middle_Ear") "UMLS:C0013455") AnnotationAssertion(Annotation( "BIRNLEX:1695") "UMLS:C1268972") AnnotationAssertion( "VHOG:0000312") AnnotationAssertion( "XAO:0000191") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "auris media") AnnotationAssertion(Annotation( "BTO:0002099") "auris media") AnnotationAssertion( "UBERON:0001756") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "middle ear") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pinna) AnnotationAssertion(Annotation( ) Annotation( ) "The part of the ear that projects from the head, connecting to the external acoustic meatus.") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000460") Annotation( "VHOG"^^xsd:string) Annotation( ) "The external expanded part of the ear characterized by a funnel-shaped structure through which the sound vibrations are received. [Dorian_AF, Elsevier's_encyclopaedic_dictionary_of_medicine, Part_B:_Anatomy_(1988)_Amsterdam_etc.:_Elsevier][VHOG]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000460") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0030223693 Liem KF, Bemis WE, Walker WF, Grande L, Functional Anatomy of the Vertebrates: An Evolutionary Perspective (2001) p.420") "Mammals have a third type of tympanic ear. An external flap, the auricle or pinna, helps funnel sound waves down the external acoustic meatus to the tympanic membrane.[well established][VHOG]") AnnotationAssertion( "In various species, the pinna can also signal mood and radiate heat") AnnotationAssertion( "The purpose of the pinna is to collect sound. It does so by acting as a funnel, amplifying the sound and directing it to the ear canal. While reflecting from the pinna, sound also goes through a filtering process which adds directional information to the sound (see sound localization, head-related transfer function, pinna notch).") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0001467") AnnotationAssertion( "EMAPA:17589") AnnotationAssertion( "EV:0100355") AnnotationAssertion( "FMA:56580") AnnotationAssertion( "MA:0000259") AnnotationAssertion( "NCIT:C32165") AnnotationAssertion( "OpenCyc:Mx4rvs_VC5wpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Auricle") "UMLS:C0928075") AnnotationAssertion( "VHOG:0000460") AnnotationAssertion( "galen:Auricle") AnnotationAssertion( "auricle") AnnotationAssertion( "auricle of ear") AnnotationAssertion( "auricle of external ear") AnnotationAssertion(Annotation( ) "auricula") AnnotationAssertion( "auricula (auris externa)") AnnotationAssertion( "pinna of ear") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "pinnae") AnnotationAssertion( "UBERON:0001757") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "pinna") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (periodontium) AnnotationAssertion(Annotation( ) Annotation( "BTO:0001021") "The tissues that invest or help to invest and support the teeth, including the periodontal ligament, gingivae, cementum, and alveolar and supporting bone[BTO].") AnnotationAssertion(Annotation( "FMA"^^xsd:string) "FMA treats periodontium and periodontal ligament as the same") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0001021") AnnotationAssertion( "CALOHA:TS-2380") AnnotationAssertion( "GAID:216") AnnotationAssertion( "MESH:A14.254.646") AnnotationAssertion( "NCIT:C33304") AnnotationAssertion(Annotation( "ncithesaurus:Periodontium") "UMLS:C0031093") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "MESH:A14.254.646") "paradentium") AnnotationAssertion(Annotation( "FMA:56665") Annotation( ) "periodontal ligament") AnnotationAssertion(Annotation( "MA:0002467") "periodontal membrane") AnnotationAssertion(Annotation( "MESH:A14.254.646") "tooth supporting structure") AnnotationAssertion( "UBERON:0001758") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "periodontium") AnnotationAssertion( "The:Periodontium.jpg"^^xsd:anyURI) SubClassOf(Annotation( "cjm"^^xsd:string) ) SubClassOf(Annotation( "cjm"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (vagus nerve) AnnotationAssertion(Annotation( ) Annotation( "ISBN:0471209627") "Cranial nerve that branches into the lateral (to body sense organs) and the intestino-accessorial (to the skin, muscles of shoulder, hyoid, larynx, gut, lungs, and heart).") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0010475") Annotation( "AAO"^^xsd:string) Annotation( "AAO:EJS"^^xsd:string) "Nerve consisting of branchiomotor and visceral efferent fibers which branch and innervate the smooth muscles and glands of the heart, lungs, esophagus, and stomach as well as some throat muscles. Sensory fibers supply mucosa of the mouth and pharynx.[AAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000737") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0030223693 Liem KF, Bemis WE, Walker WF, Grande L, Functional Anatomy of the Vertebrates: An Evolutionary Perspective (2001) p.43, ISBN:978-0072528305 Kardong KV, Vertebrates: Comparative Anatomy, Function, Evolution (2006) p.625") "We conclude this section by listing some of the many synapomorphies of craniates, including (...) (5) cranial nerves (...) (reference 1); Phylogenetically, the cranial nerves are thought to have evolved from dorsal and ventral nerves of a few anterior spinal nerves that became incorporated into the braincase. Dorsal and ventral nerves fuse in the trunk but not in the head, and they produce two series: dorsal cranial nerves (V, VII, IX, and X) and ventral cranial nerves (III, IV, VI, and XIII) (reference 2).[well established][VHOG]") AnnotationAssertion(Annotation( "BIRNLEX:801") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "10n") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010475") AnnotationAssertion( "BAMS:10n") AnnotationAssertion( "BAMS:Xn") AnnotationAssertion( "BIRNLEX:801") AnnotationAssertion( "BTO:0003472") AnnotationAssertion( "EFO:0002549") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37797") AnnotationAssertion( "FMA:5731") AnnotationAssertion( "GAID:721") AnnotationAssertion( "HBA:9337") AnnotationAssertion( "MA:0001106") AnnotationAssertion( "MBA:917") AnnotationAssertion( "MESH:D014630") AnnotationAssertion( "NCIT:C12812") AnnotationAssertion( "OpenCyc:Mx4rviHk2ZwpEbGdrcN5Y29ycA") AnnotationAssertion( "TAO:0000453") AnnotationAssertion(Annotation( "BIRNLEX:801") "UMLS:C0042276") AnnotationAssertion(Annotation( "ncithesaurus:Vagus_Nerve") "UMLS:C0042276") AnnotationAssertion(Annotation( "BIRNLEX:801") "UMLS:C1305910") AnnotationAssertion( "VHOG:0000737") AnnotationAssertion( "XAO:0003097") AnnotationAssertion( "ZFA:0000453") AnnotationAssertion( "galen:VagusNerve") AnnotationAssertion(Annotation( "BIRNLEX:801") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=702") AnnotationAssertion(Annotation( "FMA:5731") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "nervus vagus [x]") AnnotationAssertion( "tenth cranial nerve") AnnotationAssertion( "vagus") AnnotationAssertion(Annotation( "MA:0001106") "vagus X nerve") AnnotationAssertion( "vagus nerve [X]") AnnotationAssertion( "vagus nerve tree") AnnotationAssertion( "uberon") AnnotationAssertion( "CN-X") AnnotationAssertion( "cranial nerve X") AnnotationAssertion(Annotation( "NeuroNames:702") "nerve X") AnnotationAssertion(Annotation( ) Annotation( ) "nervus vagus") AnnotationAssertion(Annotation( "BTO:0003472") "nervus vagus") AnnotationAssertion(Annotation( "BTO:0003472") "pneuomgastric nerve") AnnotationAssertion( "vagal nerve") AnnotationAssertion(Annotation( "BAMS:10n") "vagus nerve or its root") AnnotationAssertion( "UBERON:0001759") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "vagus nerve") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/5/5e/Gray791.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "motor") Annotation( "Wikipedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (frontal sinus) AnnotationAssertion(Annotation( ) Annotation( "MURDOCH:753") "The frontal sinus occupies the dorsal part of the skull medial to the orbit. It overlaps cranial and nasal cavities and is often referred to as the conchofrontal sinus.") AnnotationAssertion(Annotation( "MURDOCh") "A unique feature in the horse is that the frontal sinus communicates with the caudal maxillary sinus via the frontomaxillary opening") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:57417") AnnotationAssertion( "GAID:357") AnnotationAssertion( "MA:0001793") AnnotationAssertion( "MESH:D005626") AnnotationAssertion( "NCIT:C12277") AnnotationAssertion( "OpenCyc:Mx4rvqMUR5wpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Frontal_Sinus") "UMLS:C0016734") AnnotationAssertion(Annotation( "FMA:57417") "cavity of frontal bone") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "sinus frontales") AnnotationAssertion( "UBERON:0001760") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "frontal sinus") AnnotationAssertion( "Nnh:front.svg"^^xsd:anyURI) SubClassOf(Annotation( "MA"^^xsd:string) ) # Class: (future foramen cecum) AnnotationAssertion(Annotation( "ISBN:0124020607") Annotation( "VHOG:0000826") "A thickened and indented region in the midline in the floor of the rostral part of the pharyngeal region of the foregut, located between the second and third branchial arches that is the first indication of the thyroid primordium. [Kaufman_MH_and_Bard_JBL, The_anatomical_basis_of_mouse_development_(1999)_San_Diego:_Academic_Press, p.132].") AnnotationAssertion(Annotation( "MA:0000725") "foramen caecum") AnnotationAssertion( "foramen cecum") AnnotationAssertion( "future foramen caecum") AnnotationAssertion( "future foramen cecum of tongue") AnnotationAssertion( "EHDAA2:0000550") AnnotationAssertion( "EHDAA:2150") AnnotationAssertion( "EHDAA:2977") AnnotationAssertion( "EMAPA:17069") AnnotationAssertion( "VHOG:0000826") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001761") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "future foramen cecum") SubClassOf(Annotation( "EHDAA2"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (turbinate bone) AnnotationAssertion(Annotation( "ISBN:0-683-40008-8"^^xsd:string) Annotation( "MP:0002244") "The small curved bones that extends horizontally along the lateral wall of the nasal passage.") AnnotationAssertion(Annotation( "disputed") Annotation( ) ) AnnotationAssertion(Annotation( "WP,unvetted") "In humans, the turbinates divide the nasal airway into three groove-like air passages -and are responsible for forcing inhaled air to flow in a steady, regular pattern around the largest possible surface of cilia and climate controlling tissue.") AnnotationAssertion( "Turbinals are only ossified in birds and derived synapsids.") AnnotationAssertion(Annotation( "FMA"^^xsd:string) "FMA considers nasal concha and nasal concha of ethmoid bone to be synonymous. We disambiguate these here") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0004101") AnnotationAssertion( "EMAPA:25093") AnnotationAssertion( "GAID:224") AnnotationAssertion( "MA:0000286") AnnotationAssertion( "MESH:D014420") AnnotationAssertion( "NCIT:C49594") AnnotationAssertion( "OpenCyc:Mx4rv07bVJwpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Nasal_Turbinate") "UMLS:C1266928") AnnotationAssertion( "ossified nasal turbinal") AnnotationAssertion( "ossified nasal turbinate") AnnotationAssertion( "ossified turbinate") AnnotationAssertion( "turbinal bone") AnnotationAssertion(Annotation( "EMAPA:25093") "turbinate bone") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "EMAPA:25093") "concha") AnnotationAssertion( "UBERON:0001762") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "turbinate bone") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/e/e9/Gray153.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses( ) # Class: (odontogenic papilla) AnnotationAssertion(Annotation( ) Annotation( "ZFA:0005140") "A condensation of odontoblasts that forms the part of a tooth germ that gives rise to dentin and pulp in the mature tooth. It lies below a cellular aggregation known as the enamel organ.") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "VSAO:0000025") Annotation( "VSAO"^^xsd:string) Annotation( "PSPUB:0000170"^^xsd:string) "Cell condensation that is a well-defined population of densely organized mesenchymal cells that aggregates adjacent to an epithelium.[VSAO]") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0005140") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "Tissue of the developing tooth. It is composed of pre-odontoblast and undiffentiated mesnchyme cells and connects to the basal lamina.[TAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001465") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "DOI:10.1186/1471-2148-11-307 The homology of odontodes in gnathostomes: insights from Dlx gene expression in the dogfish, Scyliorhinus canicula. BMC Evolutionary Biology (2011)") "Teeth and tooth-like structures, together named odontodes, are repeated organs thought to share a common evolutionary origin. These structures can be found in gnathostomes at different locations along the body: oral teeth in the jaws, teeth and denticles in the oral-pharyngeal cavity, and dermal denticles on elasmobranch skin.[uncertain][VHOG]") AnnotationAssertion( "In humans, the dental papilla appears after 8-10 weeks intra uteral life") AnnotationAssertion( ) AnnotationAssertion( "BTO:0001839") AnnotationAssertion( "EMAPA:32892") AnnotationAssertion( "FMA:57662") AnnotationAssertion( "GAID:1277") AnnotationAssertion( "MA:0001598") AnnotationAssertion( "MESH:A14.254.900.720.250") AnnotationAssertion( "TAO:0005140") AnnotationAssertion( "VHOG:0001465") AnnotationAssertion( "VSAO:0000025") AnnotationAssertion( "XAO:0004045") AnnotationAssertion( "ZFA:0005140") AnnotationAssertion(Annotation( "VSAO:0000025") "odontogenic condensation") AnnotationAssertion(Annotation( "ZFA:0005140") Annotation( ) "pharyngeal tooth mesenchyme") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "MA:0001598") "dental papilla") AnnotationAssertion(Annotation( "BTO:0001839") "dentinal papilla") AnnotationAssertion(Annotation( "ISBN:0073040584"^^xsd:string) Annotation( ) "dermal papilla") AnnotationAssertion(Annotation( ) Annotation( ) "papilla dentis") AnnotationAssertion(Annotation( "ZFA:0005140") "tooth mesenchyme") AnnotationAssertion( "UBERON:0001763") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "odontogenic papilla") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/2/22/Gray1011.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "ZFA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (maxillary sinus) AnnotationAssertion(Annotation( ) Annotation( "MESH:A04.531.621.578") "One of the paired paranasal sinuses, located in the body of the maxilla, communicating with the middle meatus of the nasal cavity.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "CALOHA:TS-2231") AnnotationAssertion( "FMA:57715") AnnotationAssertion( "GAID:358") AnnotationAssertion( "MA:0001794") AnnotationAssertion( "MESH:D008443") AnnotationAssertion( "NCIT:C12275") AnnotationAssertion( "OpenCyc:Mx4rvp2ZWJwpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Maxillary_Sinus") "UMLS:C0024957") AnnotationAssertion( "antrum of Highmore") AnnotationAssertion(Annotation( ) Annotation( ) "sinus maxilliaris") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "MESH:A04.531.621.578") "Highmore antrum") AnnotationAssertion(Annotation( "MESH:A04.531.621.578") "maxillary antrum") AnnotationAssertion( "UBERON:0001764") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "maxillary sinus") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/3/3d/Gray1199.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (mammary duct) AnnotationAssertion(Annotation( ) Annotation( "GO:0060603") "Epithelial tube that transports milk[GO].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0002845") AnnotationAssertion( "CALOHA:TS-2385") AnnotationAssertion( "EMAPA:35538") AnnotationAssertion( "FMA:58006") AnnotationAssertion( "MA:0000791") AnnotationAssertion( "NCIT:C32910") AnnotationAssertion(Annotation( "ncithesaurus:Lactiferous_Duct") "UMLS:C0222613") AnnotationAssertion(Annotation( "FMA:58006") "lactiferous duct") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "lactiferous gland duct") AnnotationAssertion(Annotation( "MA:0000791") "mammary gland duct") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "ductus lactiferi") AnnotationAssertion(Annotation( "BTO:0002845") "ductus lactiferi") AnnotationAssertion(Annotation( ) "galactophorous duct") AnnotationAssertion(Annotation( "BTO:0002845") "galactophorous tubule") AnnotationAssertion(Annotation( "BTO:0002845") "lactiferous tubule") AnnotationAssertion(Annotation( ) "mammilary duct") AnnotationAssertion( "UBERON:0001765") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "This structure regresses in most males") AnnotationAssertion(rdfs:label "mammary duct") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/6/64/Illu_breast_anatomy.jpg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (anterior chamber of eyeball) AnnotationAssertion(Annotation( "MESH:A09.371.060.067") Annotation( "MP:0005205") "The space in the eye, filled with aqueous humor, and bounded anteriorly by the cornea and a small portion of the sclera and posteriorly by a small portion of the ciliary body, the iris, and part of the crystalline lens.") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001431") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( ) "The part of the eyeball between the cornea and the iris, filled with aqueous humor. [TFD][VHOG]") AnnotationAssertion(Annotation( "EHDAA2"^^xsd:string) "space in EHDAA2 - consider adding Cavity of anterior chamber of eyeball") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0002084") AnnotationAssertion( "EHDAA2:0000129") AnnotationAssertion( "EHDAA:9033") AnnotationAssertion( "EMAPA:18231") AnnotationAssertion( "FMA:58078") AnnotationAssertion( "GAID:889") AnnotationAssertion( "MA:0000262") AnnotationAssertion( "MESH:D000867") AnnotationAssertion( "NCIT:C12667") AnnotationAssertion(Annotation( "ncithesaurus:Anterior_Chamber_of_the_Eye") "UMLS:C0003151") AnnotationAssertion( "VHOG:0001431") AnnotationAssertion(Annotation( "HP:0000593") Annotation( "MP:0010709") "anterior chamber") AnnotationAssertion( "anterior chamber of eye") AnnotationAssertion( "camera anterior") AnnotationAssertion( "eye anterior chamber") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0002084") "camera anterior bulbi") AnnotationAssertion(Annotation( ) Annotation( ) "camera anterior bulbi oculi") AnnotationAssertion(Annotation( "BTO:0002084") "camera oculi anterior") AnnotationAssertion( "UBERON:0001766") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "anterior chamber of eyeball") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/1/1e/Schematic_diagram_of_the_human_eye_en.svg"^^xsd:anyURI) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses(Annotation( "lexical"^^xsd:string) ) # Class: (posterior chamber of eyeball) AnnotationAssertion(Annotation( "ISBN:0-683-40008-8"^^xsd:string) Annotation( "MP:0005299") "The ring-like space, filled with aqueous humor, between the iris/pupil anteriorly and the lens and ciliary body posteriorly.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0002086") AnnotationAssertion( "FMA:58080") AnnotationAssertion( "MA:0002460") AnnotationAssertion( "NCIT:C12900") AnnotationAssertion( "OpenCyc:Mx4rvnYe8pwpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Posterior_Chamber_of_the_Eye") "UMLS:C0229094") AnnotationAssertion( "camera posterior") AnnotationAssertion( "eye posterior chamber") AnnotationAssertion( "posterior chamber of eye") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "c. posterior bulbi") AnnotationAssertion(Annotation( "BTO:0002086") "camera oculi posterior") AnnotationAssertion(Annotation( "BTO:0002086") "camera posterior bulbi") AnnotationAssertion( "UBERON:0001767") AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "The posterior chamber should not be confused with vitreous chamber.") AnnotationAssertion(rdfs:label "posterior chamber of eyeball") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/5/55/Gray883.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (uvea) AnnotationAssertion(Annotation( ) Annotation( "MP:0005197") "The pigmented middle of the three concentric layers that make up an eye, consisting of the iris, ciliary body and choroid[WP,edited].") AnnotationAssertion( "TODO - check child terms, isa vs partof. See also MA:0001284 ! tunica vasculosa plexus") AnnotationAssertion(Annotation( ) ) AnnotationAssertion( "uveal") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "CALOHA:TS-2228") AnnotationAssertion( "EMAPA:35901") AnnotationAssertion( "FMA:58103") AnnotationAssertion( "GAID:912") AnnotationAssertion( "MA:0002480") AnnotationAssertion( "MESH:D014602") AnnotationAssertion( "NCIT:C12811") AnnotationAssertion(Annotation( "ncithesaurus:Uvea") "UMLS:C0042160") AnnotationAssertion(Annotation( "FMA:58103") "tunica vasculosa of eyeball") AnnotationAssertion(Annotation( "FMA:58103") "uvea") AnnotationAssertion(Annotation( "FMA:58103") "uveal tract") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "pars iridica retinae") AnnotationAssertion(Annotation( ) "tunica vasculatis oculi") AnnotationAssertion(Annotation( ) Annotation( ) "tunica vasculosa bulbi") AnnotationAssertion(Annotation( "FMA:58103") "vascular layer of eyeball") AnnotationAssertion( "UBERON:0001768") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "uvea") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/e/eb/Gray869.png"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (iris) AnnotationAssertion(Annotation( "ISBN:0-683-40008-8"^^xsd:string) Annotation( "MP:0001322") "The adjustable membrane, composed of the stroma and pigmented epithelium, located just in front of the crystalline lens within the eye.") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000101") Annotation( "VHOG"^^xsd:string) Annotation( ) "The opaque muscular contractile diaphragm suspended in the aqueous humour in front of the lens of the eye. The organ is perforated by the pupil and continues peripherally with the ciliary body. [Dorian_AF, Elsevier's_encyclopaedic_dictionary_of_medicine, Part_B:_Anatomy_(1988)_Amsterdam_etc.:_Elsevier][VHOG]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000101") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "DOI:10.1038/nrn2283 Lamb TD, Collin SP and Pugh EN Jr, Evolution of the vertebrate eye: opsins, photoreceptors, retina and eye cup. Nature Reviews Neuroscience (2007)") "The eye of the adult lamprey is remarkably similar to our own, and it possesses numerous features (including the expression of opsin genes) that are very similar to those of the eyes of jawed vertebrates. The lamprey's camera-like eye has a lens, an iris and extra-ocular muscles (five of them, unlike the eyes of jawed vertebrates, which have six), although it lacks intra-ocular muscles. Its retina also has a structure very similar to that of the retinas of other vertebrates, with three nuclear layers comprised of the cell bodies of photoreceptors and bipolar, horizontal, amacrine and ganglion cells. The southern hemisphere lamprey, Geotria australis, possesses five morphological classes of retinal photoreceptor and five classes of opsin, each of which is closely related to the opsins of jawed vertebrates. Given these similarities, we reach the inescapable conclusion that the last common ancestor of jawless and jawed vertebrates already possessed an eye that was comparable to that of extant lampreys and gnathostomes. Accordingly, a vertebrate camera-like eye must have been present by the time that lampreys and gnathostomes diverged, around 500 Mya.[well established][VHOG]") AnnotationAssertion( "iridial") AnnotationAssertion( "The avian iris and ciliary body undergoes a transition from smooth-to-striated muscle during embryonic development [DOI:dx.doi.org/10.1006/dbio.1998.9019]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010347") AnnotationAssertion( "BTO:0000653") AnnotationAssertion( "CALOHA:TS-0491") AnnotationAssertion( "EFO:0004245") AnnotationAssertion( "EMAPA:19154") AnnotationAssertion( "EV:0100345") AnnotationAssertion( "FMA:58235") AnnotationAssertion( "GAID:917") AnnotationAssertion( "MA:0000273") AnnotationAssertion( "MESH:D007498") AnnotationAssertion( "NCIT:C12737") AnnotationAssertion( "OpenCyc:Mx4rvVjbppwpEbGdrcN5Y29ycA") AnnotationAssertion( "TAO:0001238") AnnotationAssertion(Annotation( "ncithesaurus:Iris") "UMLS:C0022077") AnnotationAssertion( "VHOG:0000101") AnnotationAssertion( "XAO:0000185") AnnotationAssertion( "ZFA:0001238") AnnotationAssertion( "uberon") AnnotationAssertion( "anterior uvea") AnnotationAssertion(Annotation( ) "irides") AnnotationAssertion(Annotation( "VHOG:0000101") Annotation( ) "irises") AnnotationAssertion( "UBERON:0001769") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "iris") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "XAO"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lacrimal canaliculus) AnnotationAssertion(Annotation( ) "The part of the lacrimal duct that connects the lacrimal punctum to the lacrimal sac.") AnnotationAssertion( "TODO - resolve lacrimal canaliculus vs lacrimal duct") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37624") AnnotationAssertion( "FMA:58245") AnnotationAssertion( "MA:0001294") AnnotationAssertion( "NCIT:C32907") AnnotationAssertion(Annotation( "ncithesaurus:Lacrimal_Canaliculus") "UMLS:C0459631") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "canaliculus lacrimalis") AnnotationAssertion( "UBERON:0001770") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "lacrimal canaliculus") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pupil) AnnotationAssertion(Annotation( "ISBN:0-683-40008-8"^^xsd:string) Annotation( "MP:0001317") "The central circular aperture of the iris through which light rays enter the eye.") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000116") Annotation( "VHOG"^^xsd:string) Annotation( ) "The circular orifice in the centre of the iris, through which light enters into the eye. [Dorian_AF, Elsevier's_encyclopaedic_dictionary_of_medicine, Part_B:_Anatomy_(1988)_Amsterdam_etc.:_Elsevier][VHOG]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000116") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "DOI:10.1038/nrn2283 Lamb TD, Collin SP and Pugh EN Jr, Evolution of the vertebrate eye: opsins, photoreceptors, retina and eye cup. Nature Reviews Neuroscience (2007)") "The eye of the adult lamprey is remarkably similar to our own, and it possesses numerous features (including the expression of opsin genes) that are very similar to those of the eyes of jawed vertebrates. The lamprey's camera-like eye has a lens, an iris and extra-ocular muscles (five of them, unlike the eyes of jawed vertebrates, which have six), although it lacks intra-ocular muscles. Its retina also has a structure very similar to that of the retinas of other vertebrates, with three nuclear layers comprised of the cell bodies of photoreceptors and bipolar, horizontal, amacrine and ganglion cells. The southern hemisphere lamprey, Geotria australis, possesses five morphological classes of retinal photoreceptor and five classes of opsin, each of which is closely related to the opsins of jawed vertebrates. Given these similarities, we reach the inescapable conclusion that the last common ancestor of jawless and jawed vertebrates already possessed an eye that was comparable to that of extant lampreys and gnathostomes. Accordingly, a vertebrate camera-like eye must have been present by the time that lampreys and gnathostomes diverged, around 500 Mya.[well established][VHOG]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010351") AnnotationAssertion( "FMA:58252") AnnotationAssertion( "GAID:918") AnnotationAssertion( "MA:0001292") AnnotationAssertion( "MESH:D011680") AnnotationAssertion( "NCIT:C33429") AnnotationAssertion( "OpenCyc:Mx4rvViBr5wpEbGdrcN5Y29ycA") AnnotationAssertion( "TAO:0001283") AnnotationAssertion(Annotation( "ncithesaurus:Pupil") "UMLS:C0034121") AnnotationAssertion( "VHOG:0000116") AnnotationAssertion( "XAO:0000283") AnnotationAssertion( "ZFA:0001283") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "ZFA:0001283") Annotation( ) "pupils") AnnotationAssertion( "UBERON:0001771") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "pupil") AnnotationAssertion( "Eye:iris.jpg"^^xsd:anyURI) SubClassOf(Annotation( "AAO"^^xsd:string) Annotation( "FMA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (corneal epithelium) AnnotationAssertion(Annotation( "MESH:A09.371.060.217.325") Annotation( "MGI:smb"^^xsd:string) Annotation( "MP:0006000") "The smooth stratified squamous epithelium that covers the outer surface of the cornea.") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0002187") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:ZDB-PUB-061010-3") "Portion of tissue comprised of four to six layers of nonkeratinized, stratified squamous cells and represents approximately 60% of the thickness of the cornea.[TAO]") AnnotationAssertion( "In Humans: It consists of several layers of cells. The cells of the deepest layer are columnar; then follow two or three layers of polyhedral cells, the majority of which are prickle cells similar to those found in the stratum mucosum of the cuticle. Lastly, there are three or four layers of squamous cells, with flattened nuclei") AnnotationAssertion( "In zebrafish: nonpigmented, stratified squamous nonkeratinizing epithelial cells, attached to a thick basement membrane that is considered to be analogous to the Bowman's membrane in mammals") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0000287") AnnotationAssertion( "CALOHA:TS-0173") AnnotationAssertion( "EFO:0001917") AnnotationAssertion( "EHDAA2:0000319") AnnotationAssertion( "EMAPA:17162") AnnotationAssertion( "FMA:58263") AnnotationAssertion( "GAID:895") AnnotationAssertion( "MA:0001243") AnnotationAssertion( "MESH:D019573") AnnotationAssertion( "NCIT:C12928") AnnotationAssertion( "TAO:0002187") AnnotationAssertion(Annotation( "ncithesaurus:Corneal_Epithelium") "UMLS:C0459875") AnnotationAssertion( "ZFA:0001683") AnnotationAssertion( "anterior corneal epithelium") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "cornea epithelial tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "cornea epithelium") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelial tissue of cornea") AnnotationAssertion( "epithelium anterius (cornea)") AnnotationAssertion(Annotation( "FMA:58263") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "epithelium anterius corneae") AnnotationAssertion( "epithelium corneæ anterior layer") AnnotationAssertion( "epithelium of cornea") AnnotationAssertion( "external epithelium of cornea") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0000287") "anterior endothelium of cornea") AnnotationAssertion(Annotation( ) Annotation( ) "e. anterius corneae") AnnotationAssertion(Annotation( "BTO:0000287") "endothelium anterius corneae") AnnotationAssertion(Annotation( "BTO:0000287") "endothelium camerae anterioris bulbi") AnnotationAssertion(Annotation( "BTO:0000287") "endothelium corneale") AnnotationAssertion(Annotation( "BTO:0000287") "epithelium posterius corneae") AnnotationAssertion( "UBERON:0001772") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "corneal epithelium") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/6/66/Gray871.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "ISBN:0781772214") ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (sclera) AnnotationAssertion(Annotation( ) Annotation( "ZFIN:ZDB-PUB-050701-15") "Opaque fibrous outer layer of the eyeball[ZFA,Kardong,WP].") AnnotationAssertion(Annotation( ) "The sclera, also known as the white part of the eye, is the opaque (usually white, though certain animals, such as horses and lizards, can have black sclera), fibrous, protective, outer layer of the eye containing collagen and elastic fiber. It is derived from the neural crest. In children, it is thinner and shows some of the underlying pigment, appearing slightly blue. In the elderly, however, fatty deposits on the sclera can make it appear slightly yellow. The sclera forms the posterior five sixths of the connective tissue coat of the globe. It is continuous with the dura mater and the cornea, and maintains the shape of the globe, offering resistance to internal and external forces, and provides an attachment for the extraocular muscle insertions. The sclera is perforated by plenty of nerves and vessels passing through the posterior scleral foramen, the hole that is formed by the optic nerve. At the optic disk the outer two-thirds of the sclera continues with the dura mater (outer coat of the brain) via the dural sheath of the optic nerve. The inner third joins with some choroidal tissue to form a plate (lamina cribrosa) across the optic nerve with perforations through which the optic fibers (fasciculi). The thickness of the sclera varies from 1mm at the posterior pole to 0.3 mm just behind the rectus muscle insertions. The sclera's blood vessels are mainly on the surface, and together with the conjunctiva (which lies on top) This is a thin layer covering the sclera. Along with the vessels of the conjunctiva, those of the sclera renders the inflamed eye bright red. [WP,unvetted][Wikipedia:Sclera].") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001274") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( ) "The tough, usually white, outer coat of the eyeball, covering all the posterior surface and continuous anteriorly with the cornea. [TFD][VHOG]") AnnotationAssertion( "scleral") AnnotationAssertion( "in fish, reptiles and monotremes the connective tissue of the sclera is skeletal") AnnotationAssertion( "continuous with the dura mater and the cornea; The sclera forms the posterior five-sixths of the connective tissue coat of the globe.") AnnotationAssertion( "Majority derives from NC that surrounds optic cup of neurectoderm; a small temporal portion develops from the mesoderm that contributes to striated extra-ocular muscles and vascular endothelia[Rada&Johnson].") AnnotationAssertion( "Seko et al demonstrate chondrogenic potential and identify this as connective tissue[DOI:10.1371/journal.pone.0003709].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010354") AnnotationAssertion( "BTO:0001606") AnnotationAssertion( "EMAPA:19027") AnnotationAssertion( "EV:0100342") AnnotationAssertion( "FMA:58269") AnnotationAssertion( "GAID:911") AnnotationAssertion( "MA:0000280") AnnotationAssertion( "MESH:D012590") AnnotationAssertion( "NCIT:C12784") AnnotationAssertion( "OpenCyc:Mx4rv7yR55wpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Sclera") "UMLS:C0036410") AnnotationAssertion( "VHOG:0001274") AnnotationAssertion( "XAO:0000183") AnnotationAssertion( "ZFA:0005563") AnnotationAssertion( "uberon") AnnotationAssertion( "scleral capsule") AnnotationAssertion( "UBERON:0001773") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "Disease notes: implicated in rheumatoid arthritis.") AnnotationAssertion(rdfs:label "sclera") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/1/1e/Schematic_diagram_of_the_human_eye_en.svg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "ZFA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "ISBN:0781772214") ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (skeletal muscle of trunk) AnnotationAssertion(Annotation( ) "A skeletal muscle organ that is part of the trunk region.") AnnotationAssertion( "Note that this class excludes smooth muscle elements in the trunk region, such as the internal anal sphincter. This appears to be consistent with other ontologies such as FMA and ZFA which appear to only include skeletal muscles here. In fact the MA class 'trunk muscle' is classified as a 'set of skeletal muscles'.") AnnotationAssertion( "Many ontologies do not appear to have a coherent distinction between an individual muscle and the musculature (i.e. the set of muscles in a region), so we group all together here.") AnnotationAssertion( "AAO:0000611") AnnotationAssertion( "EMAPA:35888") AnnotationAssertion( "FMA:58274") AnnotationAssertion( "MA:0000514") AnnotationAssertion( "TAO:0000473") AnnotationAssertion( "XAO:0003230") AnnotationAssertion( "ZFA:0000473") AnnotationAssertion(Annotation( "ZFA:0000473") "body musculature") AnnotationAssertion(Annotation( "FMA:58274") "muscle of trunk") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "muscle organ of torso") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "muscle organ of trunk") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "torso muscle organ") AnnotationAssertion( "trunk muscle") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "trunk muscle organ") AnnotationAssertion( "trunk musculature") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001774") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "skeletal muscle of trunk") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "prolog"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (ciliary body) AnnotationAssertion(Annotation( ) Annotation( "ISBN:0-683-40008-8"^^xsd:string) Annotation( "MP:0005099") "The thickened portion of the vascular tunic, which lies between the choroid and the iris, composed of ciliary muscle and ciliary processes.") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000102") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "DOI:10.1038/nrn2283 Lamb TD, Collin SP and Pugh EN Jr, Evolution of the vertebrate eye: opsins, photoreceptors, retina and eye cup. Nature Reviews Neuroscience (2007)") "The eye of the adult lamprey is remarkably similar to our own, and it possesses numerous features (including the expression of opsin genes) that are very similar to those of the eyes of jawed vertebrates. The lamprey's camera-like eye has a lens, an iris and extra-ocular muscles (five of them, unlike the eyes of jawed vertebrates, which have six), although it lacks intra-ocular muscles. Its retina also has a structure very similar to that of the retinas of other vertebrates, with three nuclear layers comprised of the cell bodies of photoreceptors and bipolar, horizontal, amacrine and ganglion cells. The southern hemisphere lamprey, Geotria australis, possesses five morphological classes of retinal photoreceptor and five classes of opsin, each of which is closely related to the opsins of jawed vertebrates. Given these similarities, we reach the inescapable conclusion that the last common ancestor of jawless and jawed vertebrates already possessed an eye that was comparable to that of extant lampreys and gnathostomes. Accordingly, a vertebrate camera-like eye must have been present by the time that lampreys and gnathostomes diverged, around 500 Mya.[well established][VHOG]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010341") AnnotationAssertion( "BTO:0000260") AnnotationAssertion( "CALOHA:TS-0694") AnnotationAssertion( "EMAPA:19065") AnnotationAssertion( "EV:0100346") AnnotationAssertion( "FMA:58295") AnnotationAssertion( "GAID:916") AnnotationAssertion( "MA:0000264") AnnotationAssertion( "MESH:D002924") AnnotationAssertion( "NCIT:C12345") AnnotationAssertion(Annotation( "ncithesaurus:Ciliary_Body") "UMLS:C0008779") AnnotationAssertion( "VHOG:0000102") AnnotationAssertion( "XAO:0000186") AnnotationAssertion( "ocular ciliary body") AnnotationAssertion( "uberon") AnnotationAssertion( "anterior uvea") AnnotationAssertion(Annotation( "VHOG:0000102") Annotation( ) "ciliary bodies") AnnotationAssertion(Annotation( ) "corpus ciliare") AnnotationAssertion(Annotation( ) Annotation( ) "corpus ciliare") AnnotationAssertion( "UBERON:0001775") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "ciliary body") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/1/1e/Schematic_diagram_of_the_human_eye_en.svg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "ISBN:0781772214") ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (optic choroid) AnnotationAssertion(Annotation( ) "Vascular layer containing connective tissue, of the eye lying between the retina and the sclera. The choroid provides oxygen and nourishment to the outer layers of the retina. Along with the ciliary body and iris, the choroid forms the uveal tract[WP].") AnnotationAssertion( "check choroid vs choroid layer; check ZFA/TAO placement - no homology assertion in VHOG. Note this is entirely in the posterior region of eyeball in ZFA") AnnotationAssertion( "choroidal") AnnotationAssertion(Annotation( "MP") "MP treats posterior uvea and optic choroid as distinct") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0001829") AnnotationAssertion( "CALOHA:TS-2054") AnnotationAssertion( "EMAPA:19077") AnnotationAssertion( "EV:0100347") AnnotationAssertion( "FMA:58298") AnnotationAssertion( "GAID:913") AnnotationAssertion( "MA:0000263") AnnotationAssertion( "MESH:D002829") AnnotationAssertion( "NCIT:C12344") AnnotationAssertion( "TAO:0005229") AnnotationAssertion(Annotation( "ncithesaurus:Choroid") "UMLS:C0008520") AnnotationAssertion( "VHOG:0001568") AnnotationAssertion( "ZFA:0005229") AnnotationAssertion(Annotation( "MA:0000263") "choroid") AnnotationAssertion(Annotation( ) "choroid coat") AnnotationAssertion(Annotation( ) "choroidea") AnnotationAssertion(Annotation( "VHOG:0001568") "eye choroid") AnnotationAssertion(Annotation( ) "posterior uvea") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0001829") "chorioid") AnnotationAssertion(Annotation( ) Annotation( ) "choroidea") AnnotationAssertion(Annotation( "ZFA:0005229") "optic choroid") AnnotationAssertion( "UBERON:0001776") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "optic choroid") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/1/1e/Schematic_diagram_of_the_human_eye_en.svg"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "MA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "Wikipedia"^^xsd:string) ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses(Annotation( "lexical"^^xsd:string) ) # Class: (substantia propria of cornea) AnnotationAssertion(Annotation( "ISBN:0-683-40008-8"^^xsd:string) Annotation( "MESH:A09.371.060.217.228") Annotation( "MP:0005300") "The lamellated connective tissue of the cornea between the Bowman and Descemet membranes.") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0002189") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:ZDB-PUB-061010-3") "Portion of tissue that is located basal to Bowman's layer and distal to Descemet's membrane and is comprised largely of connective tissue.[TAO]") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0002189") Annotation( "TAO"^^xsd:string) "relationship type change: subclass tissue (CARO:0000043) CHANGED TO: develops_from tissue (UBERON:0000479)[TAO]") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0002189") Annotation( "TAO"^^xsd:string) "relationship type change: subclass tissue (CARO:0000043) CHANGED TO: has_developmental_contribution_from tissue (UBERON:0000479)[TAO]") AnnotationAssertion( "substantia propria") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "CALOHA:TS-1138") AnnotationAssertion( "EFO:0002514") AnnotationAssertion( "EMAPA:17602") AnnotationAssertion( "FMA:58306") AnnotationAssertion( "GAID:893") AnnotationAssertion( "MA:0001245") AnnotationAssertion( "MESH:D003319") AnnotationAssertion( "NCIT:C12699") AnnotationAssertion( "TAO:0002189") AnnotationAssertion(Annotation( "ncithesaurus:Corneal_Stroma") "UMLS:C0010040") AnnotationAssertion( "ZFA:0001685") AnnotationAssertion(Annotation( "MA:0001245") "corneal stroma") AnnotationAssertion( "stroma of cornea") AnnotationAssertion(Annotation( "FMA:58306") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "substantia propria corneae") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001777") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "substantia propria of cornea") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/6/66/Gray871.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "cjm") Annotation( "ISBN:0781772214") Annotation( "Wikipedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (ciliary epithelium) AnnotationAssertion(Annotation( ) "A double layer covering the ciliary body that produces aqueous humor.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0001770") AnnotationAssertion( "CALOHA:TS-0695") AnnotationAssertion( "EMAPA:35239") AnnotationAssertion( "FMA:58464") AnnotationAssertion( "MA:0001238") AnnotationAssertion( "NCIT:C32314") AnnotationAssertion(Annotation( "ncithesaurus:Ciliary_Epithelium") "UMLS:C0459736") AnnotationAssertion(Annotation( "FMA:58464") "ciliary body epithelium") AnnotationAssertion(Annotation( "FMA:58464") "epithelium of ciliary body") AnnotationAssertion( "ocular ciliary epithelium") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001778") AnnotationAssertion(rdfs:label "ciliary epithelium") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ) SubClassOf(Annotation( "MA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "Wikipedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (iris stroma) AnnotationAssertion(Annotation( ) Annotation( ) "The delicate vascular connective tissue that lies between the anterior surface of the iris and the pars iridica retinae.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:35451") AnnotationAssertion( "FMA:58526") AnnotationAssertion( "MA:0002777") AnnotationAssertion( "ZFA:0005569") AnnotationAssertion( "iridial stroma") AnnotationAssertion( "stroma of iris") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001779") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "iris stroma") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/5/55/Gray883.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (spinal nerve) AnnotationAssertion(Annotation( "MESH:A08.800.800.720") Annotation( "MP:0001077") "The any of the paired peripheral nerves formed by the union of the dorsal and ventral spinal roots from each spinal cord segment[MP,modified].") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000824") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( ) "Any of the paired nerves emerging from the spinal cord, each attached to the cord by two roots: ventral and dorsal, and passing out between the vertebrae. [TFD][VHOG]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0011101") AnnotationAssertion( "BAMS:spin") AnnotationAssertion( "BTO:0000870") AnnotationAssertion( "EHDAA2:0001898") AnnotationAssertion( "EMAPA:16989") AnnotationAssertion( "FMA:5858") AnnotationAssertion( "GAID:841") AnnotationAssertion( "MA:0000233") AnnotationAssertion( "MESH:D013127") AnnotationAssertion( "NCIT:C12792") AnnotationAssertion( "OpenCyc:Mx4rwK_iFJwpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Spinal_Nerve") "UMLS:C0037941") AnnotationAssertion( "VHOG:0000824") AnnotationAssertion( "XAO:0003101") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "backbone nerve") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "nerve of backbone") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "nerve of spinal column") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "nerve of spine") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "nerve of vertebral column") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "spinal column nerve") AnnotationAssertion( "spinal nerve tree") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "spine nerve") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "vertebral column nerve") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "nervi spinales") AnnotationAssertion(Annotation( "BAMS:spin") Annotation( ) "spinal nerves") AnnotationAssertion( "UBERON:0001780") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "spinal nerve") AnnotationAssertion( "Spinal:nerve.svg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (layer of retina) AnnotationAssertion(Annotation( "MP:0003727") "Any of the layers that make up the retina[MP].") AnnotationAssertion(Annotation( "MA"^^xsd:string) "MA does not treat internal/external limiting memranes as layers - these are classified as laminae. Here we follow other ontologies in grouping with other layers. MA also treats retinal pigment epithelium and neural retina epithelium as distinct from the layers. We follow ontologies such as FMA and ZFA in first dividing into pigmented and neural layers - these are also classified as layers, giving us over the usual 10 layers") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010353") AnnotationAssertion( "EMAPA:35742") AnnotationAssertion( "FMA:58617") AnnotationAssertion( "MA:0001319") AnnotationAssertion( "NCIT:C49328") AnnotationAssertion(Annotation( "ncithesaurus:Retina_Layer") "UMLS:C0459649") AnnotationAssertion( "XAO:0000266") AnnotationAssertion( "retina layer") AnnotationAssertion(Annotation( "MP:0006069") "retina neuronal layer") AnnotationAssertion( "retinal layer") AnnotationAssertion(Annotation( "MP:0006069") "retinal neuronal layer") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001781") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "layer of retina") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pigmented layer of retina) AnnotationAssertion(Annotation( ) Annotation( "ZFIN:curator"^^xsd:string) "A monolayer of pigmented epithelium covering the neural retina; develops from the outer of the two layers of the optic cup[ZFA]. the pigmented cell layer just outside the neurosensory retina that nourishes retinal visual cells, and is firmly attached to the underlying choroid and overlying retinal visual cells[WP].") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0000144") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "A monolayer of pigmented epithelium covering the neural retina; develops from the outer of the two layers of the optic cup. Kimmel et al, 1995.[TAO]") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0011096") Annotation( "AAO"^^xsd:string) Annotation( "ZFA:0000144") "The monolayer of pigmented epithelium covering the neural retina.[AAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000536") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0030223693 Liem KF, Bemis WE, Walker WF, Grande L, Functional Anatomy of the Vertebrates: An Evolutionary Perspective (2001) p.429"^^xsd:string) "(...) an essentially similar sequence of events occurs during the embryonic development of the vertebrate eye. The eye initially develops as a single median evagination of the diencephalon that soon bifurcates to form the paired optic vesicles. As each optic vesicle grows towards the body surface, its proximal part narrows as the optic stalk, and its distal part invaginates to form a two-layered optic cup. (...) The outer layer of the optic cup becomes the pigment layer of the retina, whereas the inner layer differentiates into the photoreceptive cells and neuronal layers of the retina.[well established][VHOG]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0011096") AnnotationAssertion( "BTO:0001177") AnnotationAssertion( "CALOHA:TS-0869") AnnotationAssertion( "EHDAA2:0001465") AnnotationAssertion( "EHDAA:4765") AnnotationAssertion( "EMAPA:17172") AnnotationAssertion( "EMAPA:35738") AnnotationAssertion( "FMA:58627") AnnotationAssertion( "MA:0000279") AnnotationAssertion( "MA:0003173") AnnotationAssertion( "NCIT:C33470") AnnotationAssertion( "TAO:0000144") AnnotationAssertion(Annotation( "ncithesaurus:Retinal_Pigment_Epithelium") "UMLS:C0035322") AnnotationAssertion( "VHOG:0000536") AnnotationAssertion( "XAO:0003217") AnnotationAssertion( "ZFA:0000144") AnnotationAssertion( "outer pigmented layer of retina") AnnotationAssertion( "pigment epithelium of retina") AnnotationAssertion( "pigmented retina epithelium") AnnotationAssertion( "pigmented retinal epithelium") AnnotationAssertion(Annotation( ) Annotation( "MP:0005201") "retinal pigment epithelium") AnnotationAssertion(Annotation( "ZFA:0000144") "retinal pigmented epithelium") AnnotationAssertion( "stratum pigmentosum (retina)") AnnotationAssertion(Annotation( "FMA:58627") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "stratum pigmentosum retinae") AnnotationAssertion( "uberon") AnnotationAssertion( "PRE") AnnotationAssertion( "RPE") AnnotationAssertion(Annotation( "BTO:0001177") "epithelium, retinal pigment") AnnotationAssertion(Annotation( ) Annotation( ) "p. pigmentosa retinae") AnnotationAssertion( "pigmented epithelium") AnnotationAssertion( "pigmented retina") AnnotationAssertion(Annotation( "VHOG:0000536") "retinal pigment layer") AnnotationAssertion(Annotation( ) Annotation( ) "stratum pigmentosa retinae") AnnotationAssertion( "UBERON:0001782") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "pigmented layer of retina") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/5/55/Gray881.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "Wikipedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (optic disc) AnnotationAssertion(Annotation( ) "The optic disc or optic nerve head is the location where ganglion cell axons exit the eye to form the optic nerve. There are no light sensitive rods or cones to respond to a light stimulus at this point. This causes a break in the visual field called 'the blind spot' or the 'physiological blind spot'. The optic nerve head in a normal human eye carries from 1 to 1.2 million neurons from the eye towards the brain. [WP,unvetted].") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000551") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( ) "The small blind spot on the surface of the retina. It is the point where the fibers of the retina leave the eye and become part of the optic nerve. [TFD][VHOG]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000551") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "DOI:10.1038/nrn2283 Lamb TD, Collin SP and Pugh EN Jr, Evolution of the vertebrate eye: opsins, photoreceptors, retina and eye cup. Nature Reviews Neuroscience (2007), ISBN:978-0030223693 Liem KF, Bemis WE, Walker WF, Grande L, Functional Anatomy of the Vertebrates: An Evolutionary Perspective (2001) p.424 and p.426 and p.429 and Figure 12-24") "(...) we reach the inescapable conclusion that the last common ancestor of jawless and jawed vertebrates already possessed an eye that was comparable to that of extant lampreys and gnathostomes. Accordingly, a vertebrate camera-like eye must have been present by the time that lampreys and gnathostomes diverged, around 500 Mya (reference 1); Although the eye varies greatly in adaptative details among vertebrates, its basic structure is the same in all. The human eye is representative of the design typical for a tetrapod (reference 2).[well established][VHOG]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "CALOHA:TS-2153") AnnotationAssertion( "EFO:0001974") AnnotationAssertion( "EHDAA2:0001307") AnnotationAssertion( "EHDAA:9077") AnnotationAssertion( "EMAPA:18238") AnnotationAssertion( "FMA:58634") AnnotationAssertion( "MA:0000278") AnnotationAssertion( "MESH:D009898") AnnotationAssertion( "NCIT:C12760") AnnotationAssertion(Annotation( "ncithesaurus:Optic_Disc") "UMLS:C0029127") AnnotationAssertion( "VHOG:0000551") AnnotationAssertion(Annotation( "MESH:A08.800.800.120.680.660") "optic disk") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "optic disk") AnnotationAssertion(Annotation( ) "optic nerve disc") AnnotationAssertion(Annotation( ) "optic nerve head") AnnotationAssertion(Annotation( ) "optic papilla") AnnotationAssertion(Annotation( ) "physiologic blind spot") AnnotationAssertion(Annotation( ) "physiologic blind spot of mariotte") AnnotationAssertion( "UBERON:0001783") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "optic disc") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/e/ed/Gray879.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete macula lutea) AnnotationAssertion( "UBERON:0000053") AnnotationAssertion( "UBERON:0000054") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001784") AnnotationAssertion(rdfs:comment "Obsoleted as it accidentally grouped macula and macula lutea") AnnotationAssertion(rdfs:label "obsolete macula lutea") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (cranial nerve) AnnotationAssertion(Annotation( ) "Cranial nerves are nerves that emerge directly from the brain, in contrast to spinal nerves, which emerge from segments of the spinal cord.") AnnotationAssertion( "classified as neural tree organ, not nerve in FMA. CN II poses a challenge here as it is not strictly a nerve, yet is expected to be classified under CN.") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0000641") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "Twelve pairs of cranial nerves exit/enter the cranium through openings in the skull. The nerves contain efferent axons with motor and glandular functions, as well as afferent axons from cranial ganglia with sensory functions. The nerves are numbered in a rostral to caudal sequence, with the exception of the lateral line nerves.[TAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000279") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0030223693 Liem KF, Bemis WE, Walker WF, Grande L, Functional Anatomy of the Vertebrates: An Evolutionary Perspective (2001) p.43") "We conclude this section by listing some of the many synapomorphies of craniates, including (...) (5) cranial nerves (...).[well established][VHOG]") AnnotationAssertion( "See https://github.com/obophenotype/mouse-anatomy-ontology/issues/6") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0000108") AnnotationAssertion( "BAMS:cran") AnnotationAssertion( "BIRNLEX:1623") AnnotationAssertion( "BTO:0001104") AnnotationAssertion( "EHDAA2:0000323") AnnotationAssertion( "EMAPA:17264") AnnotationAssertion( "FMA:5865") AnnotationAssertion( "GAID:802") AnnotationAssertion( "HBA:9299") AnnotationAssertion( "MA:0000215") AnnotationAssertion( "MBA:967") AnnotationAssertion( "MESH:D003391") AnnotationAssertion( "NCIT:C12700") AnnotationAssertion( "OpenCyc:Mx4rvWvJVpwpEbGdrcN5Y29ycA") AnnotationAssertion( "TAO:0000641") AnnotationAssertion(Annotation( "BIRNLEX:1623") "UMLS:C0010268") AnnotationAssertion(Annotation( "ncithesaurus:Cranial_Nerve") "UMLS:C0010268") AnnotationAssertion(Annotation( "BIRNLEX:1623") "UMLS:C1269897") AnnotationAssertion( "VHOG:0000279") AnnotationAssertion( "XAO:0000429") AnnotationAssertion( "XAO:0003089") AnnotationAssertion( "ZFA:0000641") AnnotationAssertion( "cranial neural tree organ") AnnotationAssertion( "uberon") AnnotationAssertion( "cranial nerves") AnnotationAssertion(Annotation( ) Annotation( ) "nervus cranialis") AnnotationAssertion( "UBERON:0001785") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "cranial nerve") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/1/18/Brain_human_normal_inferior_view_with_labels_en-2.svg"^^xsd:anyURI) AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/8/84/Brain_human_normal_inferior_view_with_labels_en.svg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (fovea centralis) AnnotationAssertion(Annotation( ) Annotation( ) "A depression in the inner retinal surface within the macula lutea, the photoreceptor layer of which is entirely cones and which is specialized for maximum visual acuity.") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001572") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( ) "A small pit in the center of the macula lutea, the area of clearest vision, where the retinal layers are spread aside, and light falls directly on the cones. [TFD][VHOG]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001572") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "DOI:10.1017/S095252380623342X Ahnelt PK, Schubert C, Kübber-Heiss A, Schiviz A, Anger E, Independent variation of retinal S and M cone photoreceptor topographies: A survey of four families of mammals. Visual neuroscience (2006), http://www.ncbi.nlm.nih.gov/pubmed/11193946 Azuma N, Molecular cell biology on morphogenesis of the fovea and evolution of the central vision. Nihon Ganka Gakkai Zasshi (2000), DOI:10.1016/S1350-9462(00)00012-4 Ahnelt PK, Kolb H, The mammalian photoreceptor mosaic-adaptive design. Progress in Retinal and Eye Research (2000)") "Definition of fovea centralis should be considered here as 'an area centralis at the visual axis' (reference 1). There is an uncertaincy of the relation, because: 1.-The fovea first appeared in evolution in the temporal retina of fishes. Then, in birds, the nasal fovea and bifoveal system with nasal and temporal foveas developed. The fovea disappeared in primitive mammals, and reappeared in primates. A residue of the fovea is conserved in the visual streak, and the disappearance and reappearance of the fovea, in primitive mammals and primates respectively, correlates with degeneration and restoration of cone pigment genes in photoreceptors (reference 2). 2.-Many retinal features (foveas, trichromacy, midget pathways and associated cell types) appear specific to primates. This has led to investigations in parallel with other mammalian models such as cat or rabbit. Correlation of the results often proves to be difficult, since an evolutionary scenario with transitions between the mammalian models is largely lacking (reference 3).[uncertain][VHOG]") AnnotationAssertion( "foveal") AnnotationAssertion( "The fovea is also a pit in the surface of the retinas of many types of fish, reptiles, and birds. Among mammals, it is found only in simian primates. The retinal fovea takes slightly different forms in different types of animals. For example, in primates, cone photoreceptors line the base of the foveal pit, the cells that elsewhere in the retina form more superficial layers having been displaced away from the foveal region during late fetal and early postnatal life. Other foveae may show only a reduced thickness in the inner cell layers, rather than an almost complete absence") AnnotationAssertion( "high acuity vision") AnnotationAssertion( "fovea") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:2543") AnnotationAssertion( "CALOHA:TS-2055") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37589") AnnotationAssertion( "EV:0100350") AnnotationAssertion( "FMA:58658") AnnotationAssertion( "GAID:910") AnnotationAssertion( "MA:0001307") AnnotationAssertion( "MESH:D005584") AnnotationAssertion( "NCIT:C26463") AnnotationAssertion(Annotation( "BIRNLEX:2543") "UMLS:C0016622") AnnotationAssertion(Annotation( "ncithesaurus:Fovea_Centralis") "UMLS:C0016622") AnnotationAssertion(Annotation( "BIRNLEX:2543") "UMLS:C0450290") AnnotationAssertion( "VHOG:0001572") AnnotationAssertion(Annotation( "BIRNLEX:2543") "centre of macula") AnnotationAssertion(Annotation( ) "fovea centralis in macula") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BIRNLEX:2543") "centre of fovea") AnnotationAssertion( "UBERON:0001786") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "fovea centralis") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/1/1e/Schematic_diagram_of_the_human_eye_en.svg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (photoreceptor layer of retina) AnnotationAssertion(Annotation( ) Annotation( "ZFA:0000143") "The layer within the retina where the photoreceptor cell receptor segments reside.") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001165") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0030223693 Liem KF, Bemis WE, Walker WF, Grande L, Functional Anatomy of the Vertebrates: An Evolutionary Perspective (2001) p.429"^^xsd:string) "(...) an essentially similar sequence of events occurs during the embryonic development of the vertebrate eye. The eye initially develops as a single median evagination of the diencephalon that soon bifurcates to form the paired optic vesicles. As each optic vesicle grows towards the body surface, its proximal part narrows as the optic stalk, and its distal part invaginates to form a two-layered optic cup. (...) The outer layer of the optic cup becomes the pigment layer of the retina, whereas the inner layer differentiates into the photoreceptive cells and neuronal layers of the retina.[well established][VHOG]") AnnotationAssertion(Annotation( "MA"^^xsd:string) "we follow MA and ZFA in subdividing this into inner and outer segments") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:35686") AnnotationAssertion( "FMA:58680") AnnotationAssertion( "MA:0001308") AnnotationAssertion( "NCIT:C32954") AnnotationAssertion( "TAO:0000143") AnnotationAssertion(Annotation( "ncithesaurus:Layer_of_the_Rods_and_Cones") "UMLS:C0229206") AnnotationAssertion( "VHOG:0001165") AnnotationAssertion( "XAO:0003215") AnnotationAssertion( "ZFA:0000143") AnnotationAssertion( "retina photoreceptor layer") AnnotationAssertion(Annotation( "ZFA:0000143") "retinal photoreceptor layer") AnnotationAssertion( "stratum segmentorum externorum et internorum (retina)") AnnotationAssertion(Annotation( "FMA:58680") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "stratum segmentorum externorum et internorum retinae") AnnotationAssertion( "uberon") AnnotationAssertion( "layer of rods and cones") AnnotationAssertion(Annotation( "ZFA:0000143") Annotation( ) "retinal photoreceptor layers") AnnotationAssertion( "UBERON:0001787") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "photoreceptor layer of retina") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/5/55/Gray881.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "ZFA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (outer limiting layer of retina) AnnotationAssertion(Annotation( ) Annotation( "MP:0010236") "The row of jucntional complexes between the plasma membranes of rod segments and the Muller glia cells; this barrier separates the layer of inner and outer segments of the rods and cones from the outer nuclear layer and forms a blood-retina barrier[MP].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:36518") AnnotationAssertion( "FMA:58683") AnnotationAssertion( "MA:0001309") AnnotationAssertion( "NCIT:C33235") AnnotationAssertion( "TAO:0001331") AnnotationAssertion(Annotation( "ncithesaurus:Outer_Limiting_Membrane") "UMLS:C1518685") AnnotationAssertion( "XAO:0003224") AnnotationAssertion( "ZFA:0001331") AnnotationAssertion( "external limiting lamina of retina") AnnotationAssertion(Annotation( "ZFA:0001331") "external limiting membrane") AnnotationAssertion( "external limiting membrane of retina") AnnotationAssertion(Annotation( "XAO:0003224") "outer limiting membrane") AnnotationAssertion( "outer limiting membrane of retina") AnnotationAssertion( "retina external limiting lamina") AnnotationAssertion(Annotation( "MP:0010236") "retina outer limiting membrane") AnnotationAssertion( "stratum limitans externum (retina)") AnnotationAssertion(Annotation( "FMA:58683") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "stratum limitans externum retinae") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "BRB") AnnotationAssertion(Annotation( ) "blood retina barrier") AnnotationAssertion(Annotation( "ZFA:0001331") Annotation( ) "outer limiting membranes") AnnotationAssertion( "UBERON:0001788") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "outer limiting layer of retina") SubClassOf(Annotation( "MA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (outer nuclear layer of retina) AnnotationAssertion(Annotation( "ZFA:0001464") "The layer within the retina where the photoreceptor cell bodies reside.") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001170") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0030223693 Liem KF, Bemis WE, Walker WF, Grande L, Functional Anatomy of the Vertebrates: An Evolutionary Perspective (2001) p.429"^^xsd:string) "(...) an essentially similar sequence of events occurs during the embryonic development of the vertebrate eye. The eye initially develops as a single median evagination of the diencephalon that soon bifurcates to form the paired optic vesicles. As each optic vesicle grows towards the body surface, its proximal part narrows as the optic stalk, and its distal part invaginates to form a two-layered optic cup. (...) The outer layer of the optic cup becomes the pigment layer of the retina, whereas the inner layer differentiates into the photoreceptive cells and neuronal layers of the retina.[well established][VHOG]") AnnotationAssertion( "outer nuclear layer") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:Ronl") AnnotationAssertion( "BTO:0005600") AnnotationAssertion( "EMAPA:19157") AnnotationAssertion( "FMA:58684") AnnotationAssertion( "MA:0001315") AnnotationAssertion( "NCIT:C33236") AnnotationAssertion( "TAO:0001464") AnnotationAssertion(Annotation( "ncithesaurus:Outer_Nuclear_Layer_of_Retina") "UMLS:C0229210") AnnotationAssertion( "VHOG:0001170") AnnotationAssertion( "XAO:0003219") AnnotationAssertion( "ZFA:0001464") AnnotationAssertion(Annotation( "EMAPA:19157") "neural retina outer nuclear layer") AnnotationAssertion( "retina outer nuclear layer") AnnotationAssertion( "retinal outer nuclear layer") AnnotationAssertion( "stratum nucleare externum (retina)") AnnotationAssertion(Annotation( "FMA:58684") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "stratum nucleare externum retinae") AnnotationAssertion( "ONL") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0005600") "external nuclear layer") AnnotationAssertion(Annotation( "BTO:0005600") "layer of outer granules") AnnotationAssertion(Annotation( "BAMS:Ronl") "retina, outer nuclear layer") AnnotationAssertion(Annotation( "ZFA:0001464") Annotation( ) "retinal outer nuclear layers") AnnotationAssertion( "UBERON:0001789") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "outer nuclear layer of retina") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "soma") Annotation( "ZFA"^^xsd:string) ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (outer plexiform layer of retina) AnnotationAssertion(Annotation( "ZFA:0001330") "The layer within the retina where the bipolar cells synapse with the photoreceptor cells[ZFA]. Between the inner and outer nuclear layers, the outer plexiform layer (OPL) contains connections between the photoreceptors and bipolar and horizontal cells[GO].") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0001330") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "The layer within the retina where the bipolar cells synapse with the photoreceptor cells.[TAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001171") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0030223693 Liem KF, Bemis WE, Walker WF, Grande L, Functional Anatomy of the Vertebrates: An Evolutionary Perspective (2001) p.429"^^xsd:string) "(...) an essentially similar sequence of events occurs during the embryonic development of the vertebrate eye. The eye initially develops as a single median evagination of the diencephalon that soon bifurcates to form the paired optic vesicles. As each optic vesicle grows towards the body surface, its proximal part narrows as the optic stalk, and its distal part invaginates to form a two-layered optic cup. (...) The outer layer of the optic cup becomes the pigment layer of the retina, whereas the inner layer differentiates into the photoreceptive cells and neuronal layers of the retina.[well established][VHOG]") AnnotationAssertion(Annotation( "BTO:0003174") "external plexiform layer") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:Ropl") AnnotationAssertion( "BTO:0003174") AnnotationAssertion( "EMAPA:35744") AnnotationAssertion( "FMA:58685") AnnotationAssertion( "MA:0001316") AnnotationAssertion( "NCIT:C33237") AnnotationAssertion( "TAO:0001330") AnnotationAssertion(Annotation( "ncithesaurus:Outer_Plexiform_Layer") "UMLS:C0229217") AnnotationAssertion( "VHOG:0001171") AnnotationAssertion( "XAO:0003218") AnnotationAssertion( "ZFA:0001330") AnnotationAssertion(Annotation( "BTO:0003174") "outer plexiform layer") AnnotationAssertion( "retina outer plexiform layer") AnnotationAssertion( "retinal outer plexiform layer") AnnotationAssertion( "stratum plexiforme externum") AnnotationAssertion(Annotation( "FMA:58685") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "stratum plexiforme externum retinae") AnnotationAssertion(Annotation( ) "OPL") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BAMS:Ropl") "retina, outer plexiform layer") AnnotationAssertion(Annotation( "ZFA:0001330") Annotation( ) "retinal outer plexiform layers") AnnotationAssertion( "UBERON:0001790") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "outer plexiform layer of retina") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses( ) # Class: (inner nuclear layer of retina) AnnotationAssertion(Annotation( "NLX:93816") "Cytoarchitectural layer of retina containing closely packed cell bodies, the majority of which are bipolar cells (adapted from Wikipedia).") AnnotationAssertion(Annotation( "BTO:0003176") "The layer of the retina composed of the cell bodies of bipolar cells, horizontal cells, and some of the cell bodies of amacrine cells[BTO:0003176].") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001167") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0030223693 Liem KF, Bemis WE, Walker WF, Grande L, Functional Anatomy of the Vertebrates: An Evolutionary Perspective (2001) p.429"^^xsd:string) "(...) an essentially similar sequence of events occurs during the embryonic development of the vertebrate eye. The eye initially develops as a single median evagination of the diencephalon that soon bifurcates to form the paired optic vesicles. As each optic vesicle grows towards the body surface, its proximal part narrows as the optic stalk, and its distal part invaginates to form a two-layered optic cup. (...) The outer layer of the optic cup becomes the pigment layer of the retina, whereas the inner layer differentiates into the photoreceptive cells and neuronal layers of the retina.[well established][VHOG]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:Rinl") AnnotationAssertion( "BTO:0003176") AnnotationAssertion( "EMAPA:19155") AnnotationAssertion( "FMA:58686") AnnotationAssertion( "MA:0001311") AnnotationAssertion( "NCIT:C32808") AnnotationAssertion( "NLX:93816") AnnotationAssertion( "NLXANAT:1005031") AnnotationAssertion( "TAO:0000119") AnnotationAssertion(Annotation( "ncithesaurus:Inner_Nuclear_Layer") "UMLS:C0229211") AnnotationAssertion( "VHOG:0001167") AnnotationAssertion( "XAO:0003221") AnnotationAssertion( "ZFA:0000119") AnnotationAssertion( "inner nuclear layer") AnnotationAssertion(Annotation( "ZFA:0000119") "intermediate cell layer") AnnotationAssertion(Annotation( "EMAPA:19155") "neural retina inner nuclear layer") AnnotationAssertion( "retina inner nuclear layer") AnnotationAssertion( "retinal inner nuclear layer") AnnotationAssertion( "stratum nucleare internum") AnnotationAssertion(Annotation( "FMA:58686") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "stratum nucleare internum retinae") AnnotationAssertion( "INL") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NLX:93816") "layer of inner granules") AnnotationAssertion(Annotation( "BAMS:Rinl") "retina, inner nuclear layer") AnnotationAssertion( "UBERON:0001791") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "AO notes NLXANAT:1005031 appears to be retired") AnnotationAssertion(rdfs:label "inner nuclear layer of retina") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (ganglionic layer of retina) AnnotationAssertion(Annotation( "NLX:36500") "Cytoarchitectural layer of retina that contains somata of retinal ganglion cells, bounded by the stratum opticum and the inner plexiform layer.") AnnotationAssertion(Annotation( ) "a layer of the retina that consists of retinal ganglion cells[WP]. innermost nuclear layer of the retina, which contains neurons that project axons through the optic nerve to the brain[Wikipedia:Ganglion_cell_layer].") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001166") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0030223693 Liem KF, Bemis WE, Walker WF, Grande L, Functional Anatomy of the Vertebrates: An Evolutionary Perspective (2001) p.429"^^xsd:string) "(...) an essentially similar sequence of events occurs during the embryonic development of the vertebrate eye. The eye initially develops as a single median evagination of the diencephalon that soon bifurcates to form the paired optic vesicles. As each optic vesicle grows towards the body surface, its proximal part narrows as the optic stalk, and its distal part invaginates to form a two-layered optic cup. (...) The outer layer of the optic cup becomes the pigment layer of the retina, whereas the inner layer differentiates into the photoreceptive cells and neuronal layers of the retina.[well established][VHOG]") AnnotationAssertion(Annotation( "NIF"^^xsd:string) "NIFSTD class appears to be retired in nlx[http://neurolex.org/wiki/Nlx_anat_1005030]") AnnotationAssertion(Annotation( "FMA:58687") Annotation( "ZFA:0000024") "ganglion cell layer") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:Rgcl") AnnotationAssertion( "BTO:0003398") AnnotationAssertion( "CALOHA:TS-0867") AnnotationAssertion( "EMAPA:35739") AnnotationAssertion( "FMA:58687") AnnotationAssertion( "MA:0001310") AnnotationAssertion( "NCIT:C32652") AnnotationAssertion( "NLX:36500") AnnotationAssertion( "NLXANAT:1005030") AnnotationAssertion( "TAO:0000024") AnnotationAssertion( "VHOG:0001166") AnnotationAssertion( "XAO:0003223") AnnotationAssertion( "ZFA:0000024") AnnotationAssertion( "GCL layer") AnnotationAssertion( "RGC layer") AnnotationAssertion(Annotation( "FMA:58687") "ganglionic cell layer of retina") AnnotationAssertion( "retina ganglion cell layer") AnnotationAssertion( "retina ganglion layer") AnnotationAssertion( "retinal ganglion cell layer") AnnotationAssertion(Annotation( "MP:0008510") "retinal ganglion layer") AnnotationAssertion(Annotation( "FMA:58687") "stratum ganglionicum (retina)") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BAMS:Rgcl") "retina, ganglion cell layer") AnnotationAssertion(Annotation( ) Annotation( ) "stratum ganglionicum retinae") AnnotationAssertion( "UBERON:0001792") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "ganglionic layer of retina") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/5/55/Gray881.png"^^xsd:anyURI) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (nerve fiber layer of retina) AnnotationAssertion(Annotation( "ISBN:0-914294-08-3") Annotation( "MGI:smb"^^xsd:string) "Layer of the retina formed by expansion of the fibers of the optic nerve.") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001169") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0030223693 Liem KF, Bemis WE, Walker WF, Grande L, Functional Anatomy of the Vertebrates: An Evolutionary Perspective (2001) p.429"^^xsd:string) "(...) an essentially similar sequence of events occurs during the embryonic development of the vertebrate eye. The eye initially develops as a single median evagination of the diencephalon that soon bifurcates to form the paired optic vesicles. As each optic vesicle grows towards the body surface, its proximal part narrows as the optic stalk, and its distal part invaginates to form a two-layered optic cup. (...) The outer layer of the optic cup becomes the pigment layer of the retina, whereas the inner layer differentiates into the photoreceptive cells and neuronal layers of the retina.[well established][VHOG]") AnnotationAssertion( "UBERON:0005888") AnnotationAssertion(Annotation( "ZFA:0001619") "nerve fiber layer") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "DMBA:15652") AnnotationAssertion( "EMAPA:18591") AnnotationAssertion( "FMA:58688") AnnotationAssertion( "MA:0001314") AnnotationAssertion( "TAO:0002212") AnnotationAssertion( "VHOG:0001169") AnnotationAssertion( "XAO:0003220") AnnotationAssertion( "ZFA:0001619") AnnotationAssertion( "layer of nerve fibers of retina") AnnotationAssertion( "layer of nerve fibres of retina") AnnotationAssertion(Annotation( "DMBA:15652") "optic fiber layer") AnnotationAssertion( "retina nerve fiber layer") AnnotationAssertion( "stratum neurofibrarum (retina)") AnnotationAssertion(Annotation( "FMA:58688") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "stratum neurofibrarum retinae") AnnotationAssertion( "stratum opticum of retina") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "EMAPA:18591") "neural retina nerve fibre layer") AnnotationAssertion(Annotation( "VHOG:0001169") "optic fiber layer") AnnotationAssertion(Annotation( "TAO:0002212") Annotation( ) "optic fiber layers") AnnotationAssertion(Annotation( ) Annotation( ) "stratum neurofibrum retinae") AnnotationAssertion( "UBERON:0001793") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "nerve fiber layer of retina") SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (inner limiting layer of retina) AnnotationAssertion(Annotation( "MP:0010235") "The row of fused Muller cell processes and astrocytes that separates the retinal nerve fiber layer from the vitreous[MP].") AnnotationAssertion( "TODO - check frog/fish") AnnotationAssertion(Annotation( "ZFIN:ZDB-PUB-071023-7, ZFIN:ZDB-PUB-120529-3") "Membrane on the apical surface of the retina. The retinal vasculature becomes adhered to the apical surface of the ILM by 30dpf[ZFIN:ZDB-PUB-071023-7, ZFIN:ZDB-PUB-120529-3].") AnnotationAssertion(Annotation( "ZFA:0001029") Annotation( ) "ILM") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:36519") AnnotationAssertion( "FMA:58689") AnnotationAssertion( "MA:0001313") AnnotationAssertion( "NCIT:C32807") AnnotationAssertion( "TAO:0001029") AnnotationAssertion(Annotation( "ncithesaurus:Inner_Limiting_Membrane") "UMLS:C1512783") AnnotationAssertion( "XAO:0003222") AnnotationAssertion( "ZFA:0001029") AnnotationAssertion(Annotation( "XAO:0003222") "inner limiting membrane") AnnotationAssertion( "inner limiting membrane of retina") AnnotationAssertion( "internal limiting lamina of retina") AnnotationAssertion( "internal limiting membrane of retina") AnnotationAssertion(Annotation( "MP:0010235") "retina inner limiting membrane") AnnotationAssertion( "retina internal limiting lamina") AnnotationAssertion(Annotation( "FMA:58689") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "stratum limitans internum retinae") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "ZFA:0001029") Annotation( ) "inner limiting membranes") AnnotationAssertion( "UBERON:0001794") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "inner limiting layer of retina") SubClassOf(Annotation( "MA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) SubClassOf( ObjectSomeValuesFrom( )) # Class: (inner plexiform layer of retina) AnnotationAssertion(Annotation( "NLX:20558") "Cytoarchitectural layer of the retina that is made up of a dense reticulum of fibrils formed by interlaced dendrites of retinal ganglion cells and cells of the inner nuclear layer (adapted from Wikipedia).") AnnotationAssertion(Annotation( "GO:0010842") "The inner plexiform layer (IPL) is positioned between the INL and the ganglion cell layer and contains the dendrites of RGCs and processes of bipolar and amacrine cells[GO][GO:0010842].") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0001329") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "The layer within the retina where the bipolar cells synapse with the dendrites of the ganglion cells.[TAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001168") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0030223693 Liem KF, Bemis WE, Walker WF, Grande L, Functional Anatomy of the Vertebrates: An Evolutionary Perspective (2001) p.429"^^xsd:string) "(...) an essentially similar sequence of events occurs during the embryonic development of the vertebrate eye. The eye initially develops as a single median evagination of the diencephalon that soon bifurcates to form the paired optic vesicles. As each optic vesicle grows towards the body surface, its proximal part narrows as the optic stalk, and its distal part invaginates to form a two-layered optic cup. (...) The outer layer of the optic cup becomes the pigment layer of the retina, whereas the inner layer differentiates into the photoreceptive cells and neuronal layers of the retina.[well established][VHOG]") AnnotationAssertion( "http://neurolex.org/wiki/Nlx_anat_1005032 appears to be retired") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:Ripl") AnnotationAssertion( "BTO:0003175") AnnotationAssertion( "EMAPA:35741") AnnotationAssertion( "FMA:58704") AnnotationAssertion( "MA:0001312") AnnotationAssertion( "NCIT:C32809") AnnotationAssertion( "NLX:20558") AnnotationAssertion( "NLXANAT:1005032") AnnotationAssertion( "TAO:0001329") AnnotationAssertion(Annotation( "ncithesaurus:Inner_Plexiform_Layer") "UMLS:C0229221") AnnotationAssertion( "VHOG:0001168") AnnotationAssertion( "XAO:0003225") AnnotationAssertion( "ZFA:0001329") AnnotationAssertion( "retina inner plexiform layer") AnnotationAssertion( "retinal inner plexiform layer") AnnotationAssertion(Annotation( "FMA:58704") "stratum plexiforme internum") AnnotationAssertion(Annotation( ) "IPL") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0003175") "inner plexiform layer") AnnotationAssertion(Annotation( "NLXANAT:1005032") "internal plexiform layer of retina") AnnotationAssertion(Annotation( "BAMS:Ripl") "retina, inner plexiform layer") AnnotationAssertion(Annotation( "NLXANAT:1005032") "retinal internal plexiform layer") AnnotationAssertion(Annotation( "BTO:0003175") "stratum plexifome internum") AnnotationAssertion(Annotation( ) Annotation( ) "stratum plexiforme internum retinae") AnnotationAssertion( "UBERON:0001795") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "inner plexiform layer of retina") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/5/55/Gray881.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (aqueous humor of eyeball) AnnotationAssertion(Annotation( ) "A thick watery refractive medium that fills the space between the lens and the cornea[WP].") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000548") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( ) "The fluid produced by the ciliary process in the eye and occupying the anterior and posterior chambers. It provides nourishment for the lens and cornea and maintains the ocular pressure, and hence the optical integrity of the eyeball. [TFD][VHOG]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000548") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "DOI:10.1038/nrn2283 Lamb TD, Collin SP and Pugh EN Jr, Evolution of the vertebrate eye: opsins, photoreceptors, retina and eye cup. Nature Reviews Neuroscience (2007), ISBN:978-0030223693 Liem KF, Bemis WE, Walker WF, Grande L, Functional Anatomy of the Vertebrates: An Evolutionary Perspective (2001) p.424 and p.426 and p.429 and Figure 12-24") "(...) we reach the inescapable conclusion that the last common ancestor of jawless and jawed vertebrates already possessed an eye that was comparable to that of extant lampreys and gnathostomes. Accordingly, a vertebrate camera-like eye must have been present by the time that lampreys and gnathostomes diverged, around 500 Mya (reference 1); Although the eye varies greatly in adaptative details among vertebrates, its basic structure is the same in all. The human eye is representative of the design typical for a tetrapod. (...) A watery aqueous humor fills the spaces in the eye in front of the lens (...) (reference 2).[well established][VHOG]") AnnotationAssertion(Annotation( "FMA"^^xsd:string) "FMA says A+P chambers, and MA states A chamber. ZFA states A chamber and tha it is produced primarily by dorsal ciliary epithelial cells.To be investigated across taxa.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0000139") AnnotationAssertion( "EHDAA:10196") AnnotationAssertion( "EMAPA:18232") AnnotationAssertion( "ENVO:02000024") AnnotationAssertion( "FMA:58819") AnnotationAssertion( "GAID:890") AnnotationAssertion( "MA:0001236") AnnotationAssertion( "MESH:D001082") AnnotationAssertion( "NCIT:C13190") AnnotationAssertion( "OpenCyc:Mx4rvdGd-5wpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Aqueous_Humor") "UMLS:C0003662") AnnotationAssertion( "VHOG:0000548") AnnotationAssertion( "ZFA:0005564") AnnotationAssertion( "aqueous humor") AnnotationAssertion(Annotation( "EHDAA2:0000139") "aqueous humour") AnnotationAssertion(Annotation( "FMA:58819") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "humor aquosus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001796") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "aqueous humor of eyeball") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/1/1e/Schematic_diagram_of_the_human_eye_en.svg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "FMA def states A and P") Annotation( "located_in in EHDAA2") Annotation( "VHOG"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (vitreous humor) AnnotationAssertion(Annotation( "MP:0002699") "A transparent, semigelatinous substance that fills the cavity behind the crystalline lens of the eye and in front of the retina.") AnnotationAssertion(Annotation( "FMA:67388") "portion of vitreous humor") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0001451") AnnotationAssertion( "CALOHA:TS-0308") AnnotationAssertion( "EMAPA:17837") AnnotationAssertion( "ENVO:02000032") AnnotationAssertion( "EV:0100344") AnnotationAssertion( "FMA:58822") AnnotationAssertion( "MA:0001286") AnnotationAssertion( "NCIT:C13323") AnnotationAssertion( "OpenCyc:Mx4rv7ZIfZwpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Vitreous_Humor") "UMLS:C0229096") AnnotationAssertion( "VHOG:0000795") AnnotationAssertion( "ZFA:0005561") AnnotationAssertion( "humor vitreous") AnnotationAssertion(Annotation( "FMA:58822") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "humor vitreus") AnnotationAssertion(Annotation( "ZFA:0005561") "vitreous") AnnotationAssertion(Annotation( "FMA:58822") "whole portion of vitreous humor") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0001451") "humoral fluid") AnnotationAssertion(Annotation( "BTO:0001451") "ocular fluid") AnnotationAssertion(Annotation( "BTO:0001451") "vitreous fluid") AnnotationAssertion( "vitreous humour") AnnotationAssertion( "UBERON:0001797") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "vitreous humor") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/1/1e/Schematic_diagram_of_the_human_eye_en.svg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (vitreous body) AnnotationAssertion(Annotation( "MP:0002699") "Gelatinous mucoid tissue that is composed of vitreous humor and fills the cavity behind the crystalline lens of the eye and in front of the retina[MP,modified].") AnnotationAssertion( "distinciton between body and humor requires more work. These may be merged in future. Note that FMA includes the hyaloid canal as part of the vitreous body") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "CALOHA:TS-0308") AnnotationAssertion( "FMA:58827") AnnotationAssertion( "GAID:919") AnnotationAssertion( "MA:0002462") AnnotationAssertion( "MESH:A09.371.943") AnnotationAssertion( "NCIT:C33884") AnnotationAssertion(Annotation( "ncithesaurus:Vitreous_Body") "UMLS:C0042905") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001798") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "vitreous body") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/1/1e/Schematic_diagram_of_the_human_eye_en.svg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "neural ectoderm of optic cup") Annotation( "ISBN:0781772214") ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (vitreous chamber of eyeball) AnnotationAssertion(Annotation( "BTO:0002087") "The chamber in the eyeball enclosing the vitreous humor, bounded anteriorly by the lens and ciliary body and posteriorly by the posterior wall of the eyeball[BTO,modified].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0002087") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37805") AnnotationAssertion( "FMA:58848") AnnotationAssertion( "MA:0002461") AnnotationAssertion( "NCIT:C33885") AnnotationAssertion(Annotation( "ncithesaurus:Vitreous_Chamber") "UMLS:C0229095") AnnotationAssertion(Annotation( "FMA:58848") "camera postrema") AnnotationAssertion(Annotation( "FMA:58848") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "camera postrema bulbi oculi") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) "camera postrema bulbi oculi") AnnotationAssertion(Annotation( "FMA:58848") "camera vitrea") AnnotationAssertion(Annotation( "FMA:58848") "camera vitrea bulbi") AnnotationAssertion(Annotation( "FMA:58848") "postremal chamber") AnnotationAssertion(Annotation( "FMA:58848") "postremal chamber of eyeball") AnnotationAssertion(Annotation( "FMA:58848") "vitreous chamber") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001799") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "vitreous chamber of eyeball") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (sensory ganglion) AnnotationAssertion(Annotation( "MP:0000960") "The clusters of neurons in the somatic peripheral nervous system which contain the cell bodies of sensory nerve axons, interneurons and non-neuronal supporting cells.") AnnotationAssertion( ) AnnotationAssertion( "AEO:0001000") AnnotationAssertion( "BTO:0005630") AnnotationAssertion( "EMAPA:36596") AnnotationAssertion( "FMA:5885") AnnotationAssertion( "MA:0002566") AnnotationAssertion( "MESH:D017950") AnnotationAssertion( "NCIT:C13060") AnnotationAssertion(Annotation( "ncithesaurus:Sensory_Ganglion") "UMLS:C0206429") AnnotationAssertion(Annotation( ) "ganglion sensorium") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001800") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "sensory ganglion") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (anterior segment of eyeball) AnnotationAssertion(Annotation( "ISBN:0-683-40008-8"^^xsd:string) Annotation( "MESH:A09.371.060") Annotation( "MP:0005193") "Any of the parts of the eye that lie in front of, or ventral to, the lens (inclusive).") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:36594") AnnotationAssertion( "FMA:58865") AnnotationAssertion( "MA:0002484") AnnotationAssertion( "MESH:D000869") AnnotationAssertion( "NCIT:C12668") AnnotationAssertion(Annotation( "ncithesaurus:Anterior_Eye_Segment") "UMLS:C0003153") AnnotationAssertion( "ZFA:0005566") AnnotationAssertion( "anterior eye segment") AnnotationAssertion(Annotation( "ZFA:0005566") "anterior segment eye") AnnotationAssertion( "anterior segment of eye") AnnotationAssertion( "anterior segment of the eye") AnnotationAssertion( "eye anterior segment") AnnotationAssertion( "segmentum anterius (bulbus oculi)") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "segmentum anterius bulbi oculi") AnnotationAssertion( "UBERON:0001801") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "anterior segment of eyeball") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/b/ba/Cataract_in_human_eye.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "cjm"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses(Annotation( "lexical"^^xsd:string) ) # Class: (posterior segment of eyeball) AnnotationAssertion(Annotation( "ISBN:0-683-40008-8"^^xsd:string) Annotation( "MP:0005195") "Any of the parts of the eye that lie in back of, or dorsal to, the lens (but not inclusive).") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:36595") AnnotationAssertion( "FMA:58868") AnnotationAssertion( "MA:0002485") AnnotationAssertion( "NCIT:C12906") AnnotationAssertion(Annotation( "ncithesaurus:Posterior_Eye_Segment") "UMLS:C0278450") AnnotationAssertion( "ZFA:0005567") AnnotationAssertion( "eye posterior segment") AnnotationAssertion( "posterior eye segment") AnnotationAssertion(Annotation( "ZFA:0005567") "posterior segment eye") AnnotationAssertion( "posterior segment of eye") AnnotationAssertion( "posterior segment of the eye") AnnotationAssertion( "segmentum posterius (bulbus oculi)") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "segmentum posterius bulbi oculi") AnnotationAssertion( "UBERON:0001802") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "posterior segment of eyeball") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/1/1e/Schematic_diagram_of_the_human_eye_en.svg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "cjm"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (epithelium of lens) AnnotationAssertion(Annotation( ) "A layer of epithelial cells that is part of the eye.") AnnotationAssertion( "this class is the superclass of the anterior epithelium and equatorial epithlium, although the term 'lens epithelium' may refer specifically to the former") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0001873") AnnotationAssertion( "CALOHA:TS-0543") AnnotationAssertion( "EMAPA:32871") AnnotationAssertion( "FMA:58871") AnnotationAssertion( "MA:0001301") AnnotationAssertion( "TAO:0001326") AnnotationAssertion( "XAO:0004094") AnnotationAssertion( "ZFA:0001326") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelial tissue of eye lens") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelial tissue of lens") AnnotationAssertion(Annotation( "FMA:58871") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "epithelium lentis") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelium of eye lens") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "eye lens epithelial tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "eye lens epithelium") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "lens epithelial tissue") AnnotationAssertion( "lens epithelium") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001803") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "epithelium of lens") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (capsule of lens) AnnotationAssertion(Annotation( ) Annotation( "MGI:smb"^^xsd:string) Annotation( "MP:0003236") "The elastic, clear, membrane-like structure, that is outer most layer of the lens.") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000550") Annotation( "VHOG"^^xsd:string) Annotation( ) "The transparent membrane which surrounds the lens of the eye. [Dorian_AF, Elsevier's_encyclopaedic_dictionary_of_medicine, Part_B:_Anatomy_(1988)_Amsterdam_etc.:_Elsevier][VHOG]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000550") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "DOI:10.1038/nrn2283 Lamb TD, Collin SP and Pugh EN Jr, Evolution of the vertebrate eye: opsins, photoreceptors, retina and eye cup. Nature Reviews Neuroscience (2007), ISBN:978-0030223693 Liem KF, Bemis WE, Walker WF, Grande L, Functional Anatomy of the Vertebrates: An Evolutionary Perspective (2001) p.424 and p.426 and p.429 and Figure 12-24") "(...) we reach the inescapable conclusion that the last common ancestor of jawless and jawed vertebrates already possessed an eye that was comparable to that of extant lampreys and gnathostomes. Accordingly, a vertebrate camera-like eye must have been present by the time that lampreys and gnathostomes diverged, around 500 Mya (reference 1); Although the eye varies greatly in adaptative details among vertebrates, its basic structure is the same in all. The human eye is representative of the design typical for a tetrapod. (...) A watery aqueous humor fills the spaces in the eye in front of the lens (...) (reference 2).[well established][VHOG]") AnnotationAssertion( "synthesized by the lens epithelium and its main components are Type IV collagen and sulfated glycosaminoglycans (GAGs). [Wikipedia:Capsule_of_lens") AnnotationAssertion(Annotation( "FMA"^^xsd:string) "FMA classifies this is a capsule and hence an organ part. In contrast we classify this as acellular") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0000977") AnnotationAssertion( "EMAPA:18237") AnnotationAssertion( "FMA:58881") AnnotationAssertion( "MA:0001300") AnnotationAssertion( "NCIT:C32975") AnnotationAssertion(Annotation( "ncithesaurus:Lens_Capsule") "UMLS:C0229232") AnnotationAssertion( "VHOG:0000550") AnnotationAssertion( "ZFA:0005574") AnnotationAssertion(Annotation( ) "capsula lentis") AnnotationAssertion( "lens capsule") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001804") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "capsule of lens") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/5/55/Gray883.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (autonomic ganglion) AnnotationAssertion(Annotation( ) "Ganglion that has dendrites that form a junction between autonomic nerves originating from the central nervous system and autonomic nerves innervating their target organs in the periphery. There are two subtypes, sympathetic ganglion and parasympathetic ganglion.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AEO:0001001") AnnotationAssertion( "CALOHA:TS-2340") AnnotationAssertion( "EMAPA:17157") AnnotationAssertion( "EMAPA:18221") AnnotationAssertion( "FMA:5889") AnnotationAssertion( "MA:0000220") AnnotationAssertion( "MESH:D005725") AnnotationAssertion( "NCIT:C12720") AnnotationAssertion(Annotation( "ncithesaurus:Autonomic_Ganglion") "UMLS:C0017068") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "autonomic nervous system ganglion") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "ganglion of autonomic nervous system") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "ganglion of visceral nervous system") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "visceral nervous system ganglion") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "ganglion autonomicum") AnnotationAssertion( "UBERON:0001805") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "autonomic ganglion") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/f/f7/Gray839.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (sympathetic ganglion) AnnotationAssertion(Annotation( ) Annotation( "MP:0001008") "A ganglion of the sympathetic nervous system. Examples: paravertebral and the prevertebral ganglia, which include the sympathetic chain ganglia, the superior, middle, and inferior cervical ganglia, and the aorticorenal, celiac, and stellate ganglia.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010773") AnnotationAssertion( "BTO:0001333") AnnotationAssertion( "CALOHA:TS-0994") AnnotationAssertion( "EHDAA2:0001969") AnnotationAssertion( "EMAPA:17157") AnnotationAssertion( "FMA:5890") AnnotationAssertion( "MA:0000226") AnnotationAssertion( "NCIT:C12467") AnnotationAssertion(Annotation( "ncithesaurus:Sympathetic_Ganglion") "UMLS:C0017071") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "ganglion of sympathetic nervous system") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "ganglion of sympathetic part of autonomic division of nervous system") AnnotationAssertion( "ganglion sympatheticum") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "sympathetic nervous system ganglion") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "sympathetic part of autonomic division of nervous system ganglion") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "ganglion sympathicum") AnnotationAssertion(Annotation( "BTO:0001333") "ganglion sympathicum") AnnotationAssertion( "UBERON:0001806") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "sympathetic ganglion") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/f/f7/Gray839.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (paravertebral ganglion) AnnotationAssertion(Annotation( ) Annotation( "ZFIN:curator"^^xsd:string) "Trunk ganglion which is part of a bilaterally paired set of sympathetic ganglia located anterior and lateral to the spinal cord.") AnnotationAssertion( ) AnnotationAssertion( "UBERON:0005466") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0001403") AnnotationAssertion( "EHDAA:5635") AnnotationAssertion( "FMA:5891") AnnotationAssertion( "MA:0003100") AnnotationAssertion( "TAO:0001556") AnnotationAssertion( "ZFA:0001556") AnnotationAssertion( "ganglion of sympathetic trunk") AnnotationAssertion(Annotation( ) "ganglion trunci sympathetici") AnnotationAssertion(Annotation( "FMA:5891") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "ganglion trunci sympathici") AnnotationAssertion( "sympathetic chain ganglion") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "ganglia of sympathetic trunk") AnnotationAssertion(Annotation( ) Annotation( ) "ganglia trunci sympathici") AnnotationAssertion(Annotation( "FMA:80128") Annotation( ) "paravertebral ganglia") AnnotationAssertion(Annotation( ) "paravertebral ganglion") AnnotationAssertion(Annotation( ) Annotation( ) "sympathetic chain ganglia") AnnotationAssertion( "UBERON:0001807") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "paravertebral ganglion") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/2/2d/Gray847.png"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "ZFA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (parasympathetic ganglion) AnnotationAssertion(Annotation( "NLXANAT:100303") "Ganglion containing neurons that receive innervation from parasympathetic neurons in the central nervous system and subserves parasympathetic functions through innervation of smooth muscle, cardiac muscle and glands.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0001256") AnnotationAssertion( "EHDAA2:0001400") AnnotationAssertion( "EMAPA:32813") AnnotationAssertion( "FMA:5894") AnnotationAssertion( "MA:0002469") AnnotationAssertion( "NCIT:C52557") AnnotationAssertion( "NLXANAT:100303") AnnotationAssertion(Annotation( "ncithesaurus:Parasympathetic_Ganglion") "UMLS:C0017069") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "ganglion parasympathicum") AnnotationAssertion(Annotation( "BTO:0001256") "ganglion parasympathicum") AnnotationAssertion( "UBERON:0001808") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "parasympathetic ganglion") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/f/f7/Gray839.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (enteric ganglion) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:35312") AnnotationAssertion( "FMA:5896") AnnotationAssertion( "MA:0001144") AnnotationAssertion( "NCIT:C52709") AnnotationAssertion(Annotation( "ncithesaurus:Enteric_Ganglion") "UMLS:C0501399") AnnotationAssertion(Annotation( "FMA:5896") "intramural ganglion") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001809") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "enteric ganglion") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (nerve plexus) AnnotationAssertion(Annotation( ) Annotation( "FMA:5901") "Anatomical junction where subdivisions of two or more neural trees interconnect with one another to form a network through which nerve fibers of the constituent nerve trees become regrouped; together with other nerve plexuses, nerves and ganglia, it constitutes the peripheral nervous system. Examples: cervical nerve plexus, brachial nerve plexus, sacral nerve plexus[FMA].") AnnotationAssertion(Annotation( "FMA"^^xsd:string) "in FMA this is a subtype of junction rather than tissue") AnnotationAssertion( "plexus") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AEO:0000138") AnnotationAssertion( "BTO:0000205") AnnotationAssertion( "EHDAA2:0003138") AnnotationAssertion( "EHDAA:3780") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37683") AnnotationAssertion( "FMA:5901") AnnotationAssertion( "MA:0002407") AnnotationAssertion( "NCIT:C12929") AnnotationAssertion(Annotation( "ncithesaurus:Nerve_Plexus") "UMLS:C0501403") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001810") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "nerve plexus") SubClassOf( ) SubClassOf(Annotation( "AEO"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "AEO"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (conjunctiva) AnnotationAssertion(Annotation( "MESH:A09.371.060.200") Annotation( "MGI:csmith"^^xsd:string) Annotation( "MP:0001310") "The mucous membrane that lines the inner surface of the eyelids and the front of the eyeball.") AnnotationAssertion( "conjunctival") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010343") AnnotationAssertion( "BTO:0003415") AnnotationAssertion( "CALOHA:TS-2232") AnnotationAssertion( "EFO:0000374") AnnotationAssertion( "EMAPA:18233") AnnotationAssertion( "EV:0100340") AnnotationAssertion( "FMA:59011") AnnotationAssertion( "GAID:898") AnnotationAssertion( "MA:0000265") AnnotationAssertion( "MESH:A09.371.192") AnnotationAssertion( "NCIT:C12341") AnnotationAssertion(Annotation( "ncithesaurus:Conjunctiva") "UMLS:C0009758") AnnotationAssertion( "XAO:0000182") AnnotationAssertion(Annotation( "XAO:0000182") Annotation( ) "conjunctivae") AnnotationAssertion(Annotation( "XAO:0000182") Annotation( ) "conjunctivas") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) Annotation( ) "tunica conjunctiva") AnnotationAssertion(Annotation( "FMA:59011") "wall of conjunctival sac") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001811") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "conjunctiva") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/5/55/Gray883.png"^^xsd:anyURI) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ) SubClassOf(Annotation( "cjm"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "MA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "ISBN:0781772214") ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (palpebral conjunctiva) AnnotationAssertion(Annotation( "MP:0013394") "A thin transparent mucous membrane that covers the posterior surface of the eyelids and is continuous with the bulbar conjunctiva at the conjunctival fornicies.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:59025") AnnotationAssertion( "MA:0001265") AnnotationAssertion( "NCIT:C12901") AnnotationAssertion(Annotation( "ncithesaurus:Palpebral_Conjunctiva") "UMLS:C0229274") AnnotationAssertion(Annotation( "MP:0013394") "conjunctival layer of eyelids") AnnotationAssertion(Annotation( ) "tarsal conjunctiva") AnnotationAssertion( "tunica conjunctiva palpebrum") AnnotationAssertion( "uberon") AnnotationAssertion( "eyelid conjunctiva") AnnotationAssertion( "UBERON:0001812") AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "lines the eyeballs") AnnotationAssertion(rdfs:label "palpebral conjunctiva") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf(Annotation( "FMA"^^xsd:string) Annotation( "MA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (spinal nerve plexus) AnnotationAssertion(Annotation( ) "An intermingling of fiber fascicles from adjacent spinal nerves to form a network.") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000926") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0030223693 Liem KF, Bemis WE, Walker WF, Grande L, Functional Anatomy of the Vertebrates: An Evolutionary Perspective (2001) p.436") "To reach the muscles, dermatomes, and other structures of the limbs, some of the neurons in the spinal nerves come together in the plexus at the base of the limb. Such plexuses occur in all gnathostomes, and they reach their highest complexity among mammals and birds in which the cervical plexus supplies many ventral neck muscles, the brachial plexus supplies the pectoral appendage, a lumbosacral plexus supplies the pelvic appendage, and a coccygeal plexus supplies some of the pelvic muscles.[well established][VHOG]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0001899") AnnotationAssertion( "EMAPA:16987") AnnotationAssertion( "FMA:5903") AnnotationAssertion( "MA:0000235") AnnotationAssertion( "NCIT:C49601") AnnotationAssertion(Annotation( "ncithesaurus:Spinal_Nerve_Plexus") "UMLS:C0228603") AnnotationAssertion( "VHOG:0000925") AnnotationAssertion(Annotation( "FMA:5903") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "plexus nervorum spinalium") AnnotationAssertion(Annotation( "FMA:5903") "plexus of spinal nerves") AnnotationAssertion(Annotation( "FMA:5903") "somatic nerve plexus") AnnotationAssertion(Annotation( "FMA:5903") "spinal nerve plexus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001813") AnnotationAssertion(rdfs:label "spinal nerve plexus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (brachial nerve plexus) AnnotationAssertion(Annotation( ) Annotation( "UBERON:cjm"^^xsd:string) "An arrangement of nerve fibers, running from the spine where it proceeds through the neck then the axilla and into the arm where it innervates skin and muscle. [WP,modified].") AnnotationAssertion( "check superclass - nerve vs collection of fibers vs junction; note that FMA also has 'brachial autonomic nerve plexus'") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000372") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( ) "A nerve plexus originating from the anterior branches of the last four cervical and the first thoracic spinal nerves, giving off many of the principal nerves of the shoulder, chest, and arms. [TFD][VHOG]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000372") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0030223693 Liem KF, Bemis WE, Walker WF, Grande L, Functional Anatomy of the Vertebrates: An Evolutionary Perspective (2001) p.436") "To reach the muscles, dermatomes, and other structures of the limbs, some of the neurons in the spinal nerves come together in the plexus at the base of the limb. Such plexuses occur in all gnathostomes, and they reach their highest complexity among mammals and birds in which the cervical plexus supplies many ventral neck muscles, the brachial plexus supplies the pectoral appendage, a lumbosacral plexus supplies the pelvic appendage, and a coccygeal plexus supplies some of the pelvic muscles.[well established][VHOG]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0000180") AnnotationAssertion( "EHDAA:3782") AnnotationAssertion( "EMAPA:16988") AnnotationAssertion( "FMA:5906") AnnotationAssertion( "GAID:842") AnnotationAssertion( "MA:0001180") AnnotationAssertion( "MESH:D001917") AnnotationAssertion( "NCIT:C12682") AnnotationAssertion( "OpenCyc:Mx4rwNWmO5wpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Brachial_Plexus") "UMLS:C0006090") AnnotationAssertion( "VHOG:0000372") AnnotationAssertion(Annotation( "MA:0001180") "brachial plexus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "plexus brachialis") AnnotationAssertion(Annotation( ) Annotation( ) "plexus brachialis") AnnotationAssertion( "UBERON:0001814") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "brachial nerve plexus") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/3/3a/Gray808.png"^^xsd:anyURI) AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/c/c9/Brachial_plexus_color.svg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lumbosacral nerve plexus) AnnotationAssertion(Annotation( "UBERON:cjm"^^xsd:string) "An arrangement of nerve fibers, running from the spine that travels to the pelvic appendage where it innervates skin and muscle.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:lsp") AnnotationAssertion( "EHDAA2:0001040") AnnotationAssertion( "EHDAA:4673") AnnotationAssertion( "EMAPA:17587") AnnotationAssertion( "FMA:5907") AnnotationAssertion( "GAID:849") AnnotationAssertion( "MA:0001181") AnnotationAssertion( "MESH:D008160") AnnotationAssertion( "NCIT:C52805") AnnotationAssertion( "OpenCyc:Mx4rvzYo75wpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Lumbosacral_Plexus") "UMLS:C0024093") AnnotationAssertion( "VHOG:0000926") AnnotationAssertion( "lumbosacral plexus") AnnotationAssertion(Annotation( "FMA:5907") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "plexus lumbosacralis") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "plexus lumbosacralis") AnnotationAssertion( "UBERON:0001815") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "lumbosacral nerve plexus") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/8/8d/Gray822.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (autonomic nerve plexus) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A nerve plexus that is part of an autonomic nervous system [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:18224") AnnotationAssertion( "FMA:5910") AnnotationAssertion( "MA:0000221") AnnotationAssertion( "autonomic plexus") AnnotationAssertion(Annotation( "FMA:5910") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "plexus autonomicus") AnnotationAssertion(Annotation( "FMA:5910") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "plexus nervosus visceralis") AnnotationAssertion(Annotation( "FMA:5910") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "plexus visceralis") AnnotationAssertion( "visceral nerve plexus") AnnotationAssertion( "visceral plexus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001816") AnnotationAssertion(rdfs:label "autonomic nerve plexus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lacrimal gland) AnnotationAssertion(Annotation( ) Annotation( ) "The lacrimal glands are paired almond-shaped glands, located in or near the orbital region, that secrete the aqueous layer of the tear film.[WP].") AnnotationAssertion(Annotation( ) ) AnnotationAssertion(Annotation( "FMA:59101") "Lobular organ the parenchyma of which consists of glandular acini which communicate the lacrimal sac. Examples: There only two instances, right lacrimal and left lacrimal glands.") AnnotationAssertion(Annotation( ) "The preorbital gland is a paired exocrine gland found in many species of hoofed animals, which is homologous to the lacrimal gland found in humans. These glands are trenchlike slits of dark blue to black, nearly bare skin extending from the medial canthus of each eye. They are lined by a combination of sebaceous and sudoriferous glands, and they produce secretions which contain pheromones and other semiochemical compounds. Ungulates frequently deposit these secretions on twigs and grass as a means of communication with other animals. The preorbital gland serves different roles in different species. Pheromone-containing secretions from the preorbital gland may serve to establish an animal's dominance (especially in preparation for breeding), mark its territory, or simply to produce a pleasurable sensation to the animal. Because of its critical role in scent marking, the preorbital gland is usually considered as a type of scent gland. A further function of these glands may be to produce antimicrobial compounds against skin pathogens. Antimicrobial compounds found in these glands may be biosynthesized by the animal itself, or by microorganisms that live in these glands[Wikipedia:Preorbital_gland].") AnnotationAssertion( "https://github.com/obophenotype/uberon/wiki/Modeling-paired-structures-Design-Pattern"^^xsd:anyURI) AnnotationAssertion( "In humans, they are situated in the upper, outer portion of each orbit") AnnotationAssertion( "Innervation is highly complex and species-specific") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0000044") AnnotationAssertion( "CALOHA:TS-0512") AnnotationAssertion( "EFO:0001389") AnnotationAssertion( "EMAPA:35463") AnnotationAssertion( "EV:0100339") AnnotationAssertion( "FMA:59101") AnnotationAssertion( "MA:0001296") AnnotationAssertion( "NCIT:C12346") AnnotationAssertion(Annotation( "ncithesaurus:Lacrimal_Gland") "UMLS:C0022907") AnnotationAssertion( "VHOG:0001476") AnnotationAssertion(Annotation( ) Annotation( ) "glandula lacrimalis") AnnotationAssertion(Annotation( ) "lacrimal-preorbital gland") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( "NCBITaxon:91561"^^xsd:string) Annotation( ) "glandula praeorbitalis") AnnotationAssertion(Annotation( ) Annotation( "NCBITaxon:91561"^^xsd:string) Annotation( ) "preorbital gland") AnnotationAssertion(Annotation( "BTO:0000044") "tear gland") AnnotationAssertion( "UBERON:0001817") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "lacrimal gland") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/c/cf/Gray896.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (tarsal gland) AnnotationAssertion(Annotation( ) Annotation( ) Annotation( "ISBN:0123813611"^^xsd:string) "A modified lobulated sebaceous gland at the rim of an eyelid, responsible for the supply of meibum.") AnnotationAssertion( "in mice, meibomian gland development is initiated around E18.5 with the formation of an epithelial placode and mesenchymal condensation, similar to that observed in hair follicle development; invagination of the epithelium into the developing mesenchyme then continues from birth to about P3 with initial branching of the epithelial cord detected at P5; by P8 the developing meibomian gland shows extensive ductal branching and the formation of distinct acini with mature meibomian glands present by P15 or eyelid opening[PMID:20664693]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0004165") AnnotationAssertion( "FMA:59104") AnnotationAssertion( "GAID:899") AnnotationAssertion( "MA:0001249") AnnotationAssertion( "MESH:D008537") AnnotationAssertion( "NCIT:C33075") AnnotationAssertion(Annotation( "ncithesaurus:Meibomian_Gland") "UMLS:C0025181") AnnotationAssertion(Annotation( "MA:0001249") "Meibomian gland") AnnotationAssertion( "gland of Meibom") AnnotationAssertion( "glandula tarsales") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "MA:0001249") "palpebral gland") AnnotationAssertion(Annotation( "BTO:0004165") "tarsoconjunctival gland") AnnotationAssertion( "UBERON:0001818") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "tarsal gland") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/1/1e/Gray1205.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "ISBN:0123813611"^^xsd:string) Annotation( "MA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (palpebral fissure) AnnotationAssertion(Annotation( ) "Orifice separating upper and lower eyelids. In the human adult this measures about 10mm vertically and 30 mm horizontally. It can be reduced in size in fetal alcohol syndrome. In Trisomy 9 the palpebral fissures can be upslanting. [WP,modified].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:59110") AnnotationAssertion( "MA:0001266") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "rima palpebrarum") AnnotationAssertion( "UBERON:0001819") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "palpebral fissure") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/a/a9/Gray892.png"^^xsd:anyURI) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (sweat gland) AnnotationAssertion(Annotation( "ISBN:0-683-40008-8"^^xsd:string) Annotation( "MP:0000674") "Any of the coil glands of the skin that secrete sweat.") AnnotationAssertion( "TODO - check if all sweat glands are epidermal - see EMAPA:29743") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001467") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( ) "A gland that secretes sweat, found in the dermis or subcutaneous tissue, opening by a duct on the body surface. [TFD][VHOG]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001467") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0471090588 Hildebrand M, Analysis of vertebrate structure (1983) p.101") "Sweat glands (also called sudoriferous glands) are unique to mammals.[well established][VHOG]") AnnotationAssertion( "In humans a system of apocrine - and merocrine sweat glands is the main method of cooling. Many other mammals rely on panting or other means as a primary source of cooling, but still use sweat glands to aid in body temperature regulation") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0001331") AnnotationAssertion( "CALOHA:TS-0993") AnnotationAssertion( "EMAPA:35844") AnnotationAssertion( "EV:0100160") AnnotationAssertion( "FMA:59152") AnnotationAssertion( "GAID:943") AnnotationAssertion( "MA:0000150") AnnotationAssertion( "MESH:D013545") AnnotationAssertion( "NCIT:C33712") AnnotationAssertion( "OpenCyc:Mx4rvVjx15wpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Sweat_Gland") "UMLS:C0038989") AnnotationAssertion( "VHOG:0001467") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0001331") "glandula sudorifera") AnnotationAssertion(Annotation( "BTO:0001331") "sudoriferous gland") AnnotationAssertion(Annotation( "BTO:0001331") "sudoriparous gland") AnnotationAssertion( "UBERON:0001820") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "sweat gland") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/6/6d/Skin.svg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "definitional"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (sebaceous gland) AnnotationAssertion(Annotation( ) Annotation( "MP:0000647") "A holocrine gland that secretes sebum into the hair follicles, or in hairless areas into ducts.[MP].") AnnotationAssertion( "sebaceous glands are also found in glabrous areas of eyelids, nose, penis, labia minora and nipples, and do not always secrete into hair follices. This causes some confusion in classification. In addition some structures, such as preputial glands are sometimes called 'modified' sebaceous glands, implying a non-subclass relationship. we follow MP and MA in keeping this class generic and creating a distinct subclass for sebaceuous glands of the skin. The FMA class may be better placed under this subclass.") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001468") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( ) "Any of the numerous holocrine glands in the dermis that empty into a hair follicle and produce and secrete sebum. [TFD][VHOG]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001468") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0471090588 Hildebrand M, Analysis of vertebrate structure (1983) p.102") "Sebaceous glands are also limited to mammals.[well established][VHOG]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0001980") AnnotationAssertion( "CALOHA:TS-2384") AnnotationAssertion( "EMAPA:35754") AnnotationAssertion( "EV:0100161") AnnotationAssertion( "FMA:59160") AnnotationAssertion( "GAID:900") AnnotationAssertion( "MA:0002565") AnnotationAssertion( "MESH:D012627") AnnotationAssertion( "NCIT:C33519") AnnotationAssertion(Annotation( "ncithesaurus:Sebaceous_Gland") "UMLS:C0036505") AnnotationAssertion( "VHOG:0001468") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "glandula sebacea") AnnotationAssertion(Annotation( "BTO:0001980") "glandula sebaceae") AnnotationAssertion(Annotation( "BTO:0001980") "sebaceous follicle") AnnotationAssertion( "UBERON:0001821") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "sebaceous gland") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/4/49/HairFollicle.png"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "Wikipedia"^^xsd:string) ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "definitional"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (orbital septum) AnnotationAssertion(Annotation( ) "A membranous sheet that acts as the anterior boundary of the orbit. It extends from the orbital rims to the eyelids[WP].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37609") AnnotationAssertion( "FMA:59328") AnnotationAssertion( "MA:0001259") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "septum orbitale") AnnotationAssertion( "UBERON:0001822") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "orbital septum") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/1/18/Gray891.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (nasal cartilage) AnnotationAssertion(Annotation( ) "One of the cartilage structures in the nose that provide form and support[WP].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "CALOHA:TS-0655") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37681") AnnotationAssertion( "FMA:59502") AnnotationAssertion( "MA:0001883") AnnotationAssertion( "NCIT:C49593") AnnotationAssertion(Annotation( "ncithesaurus:Nasal_Cartilage") "UMLS:C0225415") AnnotationAssertion( "cartilage of nose") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001823") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "nasal cartilage") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/e/e1/Gray852.png"^^xsd:anyURI) SubClassOf(Annotation( "MA"^^xsd:string) ) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (mucosa of larynx) AnnotationAssertion(Annotation( "MP:0002261") "The mucous lining of the larynx, which is composed of squamous epithelium in the upper larynx and ciliated columnar epithelium in the lower larynx.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:18334") AnnotationAssertion( "FMA:59662") AnnotationAssertion( "GAID:301") AnnotationAssertion( "MA:0001766") AnnotationAssertion( "MESH:D007820") AnnotationAssertion( "NCIT:C49246") AnnotationAssertion(Annotation( "ncithesaurus:Laryngeal_Mucosa") "UMLS:C0023053") AnnotationAssertion( "laryngeal mucosa") AnnotationAssertion( "larynx mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "larynx mucosa of organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "larynx mucous membrane") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "larynx organ mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of organ of larynx") AnnotationAssertion( "mucous membrane of larynx") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "organ mucosa of larynx") AnnotationAssertion(Annotation( "FMA:59662") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "tunica mucosa laryngis") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "EMAPA:18334") "laryngeal mucous membrane") AnnotationAssertion( "UBERON:0001824") AnnotationAssertion(rdfs:label "mucosa of larynx") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (paranasal sinus) AnnotationAssertion(Annotation( "ISBN:0-683-40008-8"^^xsd:string) Annotation( "MP:0002240") "The paired air-filled cavities surrounded by the bones of the face that are lined by mucous membranes and are continuous with the nasal cavity.") AnnotationAssertion( "Arise as epithelial lined diverticula of the lining of the nasal cavity. The extent of sinus development varies with species, most of the development occurs postnatally") AnnotationAssertion( ) AnnotationAssertion( "sinus") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "CALOHA:TS-2082") AnnotationAssertion( "EHDAA:6489") AnnotationAssertion( "EMAPA:35662") AnnotationAssertion( "EV:0100038") AnnotationAssertion( "FMA:59679") AnnotationAssertion( "GAID:355") AnnotationAssertion( "MA:0000431") AnnotationAssertion( "MESH:D010256") AnnotationAssertion( "NCIT:C12763") AnnotationAssertion(Annotation( "ncithesaurus:Paranasal_Sinus") "UMLS:C0030471") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "GAID:355") "nasal sinus") AnnotationAssertion( "UBERON:0001825") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "paranasal sinus") AnnotationAssertion( "Nnh:front.svg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (nasal cavity mucosa) AnnotationAssertion(Annotation( "MP:0002238") "The mucous membrane that lines the nasal cavity[MP].") AnnotationAssertion( "TODO - check lining vs part of. split olfactory and nasal mucosa?") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0000912") AnnotationAssertion( "CALOHA:TS-0657") AnnotationAssertion( "EMAPA:36026") AnnotationAssertion( "FMA:59684") AnnotationAssertion( "GAID:302") AnnotationAssertion(Annotation( "FMA:59684") "mucosa of nose") AnnotationAssertion(Annotation( "FMA:59684") "mucous membrane of nose") AnnotationAssertion( "tunica mucosa nasalis") AnnotationAssertion(Annotation( "FMA:59684") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "tunica mucosa nasi") AnnotationAssertion( "uberon") AnnotationAssertion( "nasal mucosa") AnnotationAssertion( "UBERON:0001826") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "nasal cavity mucosa") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (secretion of lacrimal gland) AnnotationAssertion(Annotation( ) Annotation( ) "Aqueous substance secreted by the lacrimal gland.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0001499") AnnotationAssertion( "CALOHA:TS-1016") AnnotationAssertion( "EMAPA:36537") AnnotationAssertion( "ENVO:02000034") AnnotationAssertion( "FMA:59756") AnnotationAssertion( "GAID:1173") AnnotationAssertion( "MA:0002508") AnnotationAssertion( "MESH:D013666") AnnotationAssertion( "NCIT:C33739") AnnotationAssertion(Annotation( "ncithesaurus:Tear") "UMLS:C0039409") AnnotationAssertion( "galen:Tear") AnnotationAssertion( "galen:Tears") AnnotationAssertion( "lacrimal fluid") AnnotationAssertion( "lacrimal gland secretion") AnnotationAssertion( "lacrimal secretion") AnnotationAssertion(Annotation( "FMA:59756") "tear") AnnotationAssertion(Annotation( ) "tears") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0001499") "tear fluid") AnnotationAssertion( "UBERON:0001827") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "secretion of lacrimal gland") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (gingiva) AnnotationAssertion(Annotation( ) Annotation( "ISBN:0013002015") "The fibrous investing tissue, covered by keratinized epithelium, that immediately surrounds a tooth and is contiguous with its periodontal ligament and with the mucosal tissues of the mouth[Glossary of Periodontal Terms 2001].") AnnotationAssertion( "FMA has a 3-level breakdown of jaws into: region, jaw (skeleton+gums), skeleton.") AnnotationAssertion( "gingival") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0000519") AnnotationAssertion( "CALOHA:TS-2074") AnnotationAssertion( "EFO:0001925") AnnotationAssertion( "EMAPA:35945") AnnotationAssertion( "EV:0100064") AnnotationAssertion( "FMA:59762") AnnotationAssertion( "GAID:1257") AnnotationAssertion( "MA:0000342") AnnotationAssertion( "MESH:A14.254.646.480") AnnotationAssertion( "NCIT:C32677") AnnotationAssertion( "OpenCyc:Mx4rvViWnZwpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Gingiva") "UMLS:C0017562") AnnotationAssertion( "VHOG:0001269") AnnotationAssertion( "galen:Gingiva") AnnotationAssertion(Annotation( "FMA:59762") "gum") AnnotationAssertion(Annotation( ) "gum tissue") AnnotationAssertion( "gums") AnnotationAssertion( "uberon") AnnotationAssertion( "gingival mucosa") AnnotationAssertion( "UBERON:0001828") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "gingiva") AnnotationAssertion( "Tooth:Section.svg"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "Carranza") ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "ISBN:0013002015") ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (major salivary gland) AnnotationAssertion(Annotation( "MP:0003792") "One of the three largest glands of the oral cavity that secrete most of the saliva, including the parotid, submandibular, and sublingual glands.") AnnotationAssertion(Annotation( "ISBN:0123813611"^^xsd:string) "There are 3 pairs of major salivary glands in human and mouse") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:59788") AnnotationAssertion( "MA:0002478") AnnotationAssertion( "NCIT:C12999") AnnotationAssertion(Annotation( "ncithesaurus:Major_Salivary_Gland") "UMLS:C0930553") AnnotationAssertion( "galen:MajorSalivaryGland") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001829") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "major salivary gland") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (minor salivary gland) AnnotationAssertion(Annotation( ) Annotation( "MP:0003791") "One of the smaller, largely mucus-secreting, exocrine glands of the oral cavity, consisting of the labial, buccal, molar, lingual, and palatine glands[MP].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:35574") AnnotationAssertion( "FMA:59789") AnnotationAssertion( "GAID:940") AnnotationAssertion( "MA:0002479") AnnotationAssertion( "MESH:D012470") AnnotationAssertion( "NCIT:C33129") AnnotationAssertion(Annotation( "ncithesaurus:Minor_Salivary_Gland") "UMLS:C0036099") AnnotationAssertion( "galen:MinorSalivaryGland") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001830") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "There are over 600 minor salivary glands located throughout the oral cavity within the lamina propria of the oral mucosa. They are 1-2mm in diameter and unlike the other glands, they are not encapsulated by connective tissue only surrounded by it. The gland is usually a number of acini connected in a tiny lobule. A minor salivary gland may have a common excretory duct with another gland, or may have its own excretory duct. Their secretion is mainly mucous in nature (except for von Ebner's glands) and have many functions such as coating the oral cavity with saliva[WP].") AnnotationAssertion(rdfs:label "minor salivary gland") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (parotid gland) AnnotationAssertion(Annotation( ) "The parotid gland is the largest of the salivary glands. It is found wrapped around the mandibular ramus, and it secretes saliva through Stensen's duct into the oral cavity, to facilitate mastication and swallowing. [WP,unvetted].") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000308") Annotation( "VHOG"^^xsd:string) Annotation( ) "A mammalian salivary gland located caudal to the ear. [Bemis_WE, Functional_Anatomy_of_the_Vertebrates:_An_Evolutionary_Perspective, Glossary_G-22, Grande_L, Liem_KF, Third_Edition_(2001)_Orlando_Fla.:_Harcourt_College_Publishers, Walker_WF][VHOG]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000308") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0072528305 Kardong KV, Vertebrates: Comparative Anatomy, Function, Evolution (2006) p.525") "The most common oral glands in mammals are the salivary glands. There are usually three primary pairs of salivary glands, named for their approximate positions: mandibular (submandibular or submaxillary), sublingual, and parotid.[well established][VHOG]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010095") AnnotationAssertion( "BTO:0001004") AnnotationAssertion( "CALOHA:TS-0748") AnnotationAssertion( "EFO:0002558") AnnotationAssertion( "EMAPA:18537") AnnotationAssertion( "EV:0100060") AnnotationAssertion( "FMA:59790") AnnotationAssertion( "GAID:938") AnnotationAssertion( "MA:0001585") AnnotationAssertion( "MESH:D010306") AnnotationAssertion( "NCIT:C12427") AnnotationAssertion( "OpenCyc:Mx4rvqwyg5wpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Parotid_Gland") "UMLS:C0030580") AnnotationAssertion( "VHOG:0000308") AnnotationAssertion( "galen:ParotidGland") AnnotationAssertion( "parotid") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "glandula parotidea") AnnotationAssertion( "UBERON:0001831") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "The mouse parotid, exorbital lacrimal gland and exocrine pancreas have similar histological appearances[ISBN:0123813611]") AnnotationAssertion(rdfs:label "parotid gland") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/5/51/Illu_quiz_hn_02.jpg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA-abduced-lr"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (sublingual gland) AnnotationAssertion(Annotation( "MGI:hdene") Annotation( "MP:0004035") "The small mucin-producing salivary glands in the floor of the mouth beneath the tongue, anterior to the submandibular gland.") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000363") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( ) "One of a pair of small salivary glands situated under the mucous membrane of the floor of the mouth, beneath the tongue. [TFD][VHOG]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000363") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0030223693 Liem KF, Bemis WE, Walker WF, Grande L, Functional Anatomy of the Vertebrates: An Evolutionary Perspective (2001) p.553") "Most mammals have well-developed parotid, mandibular, and sublingual glands.[well established][VHOG]") AnnotationAssertion(Annotation( "ISBN:0123813611"^^xsd:string) "Single lobed in mouse; largest acini of the 3 rodent salivary glands. In human and mouse, secretions are predominantly mucinous") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0001315") AnnotationAssertion( "CALOHA:TS-0987") AnnotationAssertion( "EMAPA:18809") AnnotationAssertion( "EV:0100062") AnnotationAssertion( "FMA:59791") AnnotationAssertion( "GAID:941") AnnotationAssertion( "MA:0001588") AnnotationAssertion( "MESH:D013361") AnnotationAssertion( "NCIT:C12234") AnnotationAssertion(Annotation( "ncithesaurus:Sublingual_Salivary_Gland") "UMLS:C0038553") AnnotationAssertion( "VHOG:0000363") AnnotationAssertion( "Rivinus' gland") AnnotationAssertion( "ductus sublingualis") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0001315") "Rivinus gland") AnnotationAssertion(Annotation( ) Annotation( ) "glandula sublingualis") AnnotationAssertion( "sublingual salivary gland") AnnotationAssertion(Annotation( "MA:0001589") "submaxillary gland") AnnotationAssertion( "UBERON:0001832") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "sublingual gland") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/7/7d/Gray1024.png"^^xsd:anyURI) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lip) AnnotationAssertion(Annotation( ) Annotation( ) "One of the two fleshy folds which surround the opening of the mouth.") AnnotationAssertion( ) AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0007006") Annotation( "TAO"^^xsd:string) Annotation( ) Annotation( "ZFIN:curator"^^xsd:string) "Surface structure that is one of the two fleshy folds surrounding the opening of the mouth.[TAO]") AnnotationAssertion( "labial") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0001647") AnnotationAssertion( "CALOHA:TS-0558") AnnotationAssertion( "EMAPA:32839") AnnotationAssertion( "FMA:59816") AnnotationAssertion( "GAID:76") AnnotationAssertion( "MA:0000343") AnnotationAssertion( "MESH:D008046") AnnotationAssertion( "NCIT:C12220") AnnotationAssertion( "OpenCyc:Mx4rvVi4U5wpEbGdrcN5Y29ycA") AnnotationAssertion( "TAO:0007006") AnnotationAssertion(Annotation( "ncithesaurus:Lip") "UMLS:C0023759") AnnotationAssertion( "VHOG:0000677") AnnotationAssertion( "ZFA:0007006") AnnotationAssertion( "galen:Lip") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "labia oris") AnnotationAssertion( "lips") AnnotationAssertion( "UBERON:0001833") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "lip") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/9/90/Lips.JPG"^^xsd:anyURI) AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/9/99/Mouth.jpg"^^xsd:anyURI) SubClassOf(Annotation( "ZFA"^^xsd:string) ) SubClassOf(Annotation( "BTO"^^xsd:string) Annotation( "FMA-implicit") Annotation( "VHOG"^^xsd:string) Annotation( "ZFA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "cjm"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses( ) # Class: (upper lip) AnnotationAssertion(Annotation( ) Annotation( "TAO:0001970") "Lip that covers the upper portion of the mouth.[TAO].") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001750") Annotation( "VHOG"^^xsd:string) Annotation( ) "Lip that covers the lower portion of the mouth. [ZFIN:Curator][VHOG]") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0001970") Annotation( "TAO"^^xsd:string) Annotation( "TAO:wd"^^xsd:string) "Lip that covers the upper portion of the mouth.[TAO]") AnnotationAssertion( "UBERON:0003391") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:17925") AnnotationAssertion( "FMA:59817") AnnotationAssertion( "MA:0000919") AnnotationAssertion( "OpenCyc:Mx4rvWPv7pwpEbGdrcN5Y29ycA") AnnotationAssertion( "TAO:0001970") AnnotationAssertion( "VHOG:0001750") AnnotationAssertion( "ZFA:0005226") AnnotationAssertion(Annotation( ) "upper jaw lip") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "labium superius oris") AnnotationAssertion( "UBERON:0001834") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "upper lip") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/d/d4/Illu01_head_neck.jpg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lower lip) AnnotationAssertion(Annotation( ) Annotation( "TAO:0002060") "Lip that covers the lower portion of the mouth.[TAO].") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0002060") Annotation( "TAO"^^xsd:string) Annotation( "TAO:wd"^^xsd:string) "Lip that covers the lower portion of the mouth.[TAO]") AnnotationAssertion( "UBERON:0003392") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0001020") AnnotationAssertion( "EMAPA:17909") AnnotationAssertion( "FMA:59818") AnnotationAssertion( "MA:0000921") AnnotationAssertion( "NCIT:C94572") AnnotationAssertion( "OpenCyc:Mx4rv842UpwpEbGdrcN5Y29ycA") AnnotationAssertion( "TAO:0002060") AnnotationAssertion(Annotation( "ncithesaurus:Lower_Lip") "UMLS:C0458583") AnnotationAssertion( "ZFA:0005225") AnnotationAssertion(Annotation( ) "lower jaw lip") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "labium inferius oris") AnnotationAssertion( "UBERON:0001835") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "lower lip") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/9/99/Mouth.jpg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (saliva) AnnotationAssertion(Annotation( ) Annotation( "GO:0046541") "A fluid produced in the oral cavity by salivary glands, typically used in predigestion, but also in other functions.") AnnotationAssertion( "salivary") AnnotationAssertion(Annotation( "GO"^^xsd:string) "We classify a wide variety of not necessarily homologous fluids here. In humans, the saliva is a turbid and slightly viscous fluid, generally of an alkaline reaction, and is secreted by the parotid, submaxillary, and sublingual glands. In the mouth the saliva is mixed with the secretion from the buccal glands. In man and many animals, saliva is an important digestive fluid on account of the presence of the peculiar enzyme, ptyalin") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0001202") AnnotationAssertion( "CALOHA:TS-0891") AnnotationAssertion( "EMAPA:36536") AnnotationAssertion( "ENVO:02000036") AnnotationAssertion( "FMA:59862") AnnotationAssertion( "GAID:1167") AnnotationAssertion( "MA:0002507") AnnotationAssertion( "MAT:0000444") AnnotationAssertion( "MESH:D012463") AnnotationAssertion( "NCIT:C13275") AnnotationAssertion( "OpenCyc:Mx4rvVjJ95wpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Saliva") "UMLS:C0036087") AnnotationAssertion( "galen:Saliva") AnnotationAssertion(Annotation( "FMA:59862") "salivary gland secretion") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "sailva normalis") AnnotationAssertion(Annotation( ) Annotation( ) "saliva atomaris") AnnotationAssertion(Annotation( ) Annotation( ) "saliva molecularis") AnnotationAssertion( "UBERON:0001836") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "saliva") SubClassOf( ) # Class: (duct of salivary gland) AnnotationAssertion(Annotation( ) "The duct of a salivary gland.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0005115") AnnotationAssertion( "EMAPA:35750") AnnotationAssertion( "FMA:59908") AnnotationAssertion( "GAID:939") AnnotationAssertion( "MA:0001586") AnnotationAssertion( "MESH:D018987") AnnotationAssertion( "NCIT:C32486") AnnotationAssertion( "salivary duct") AnnotationAssertion( "salivary gland duct") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0005115") "secretory duct") AnnotationAssertion( "UBERON:0001837") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "duct of salivary gland") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (sublingual duct) AnnotationAssertion(Annotation( ) "A duct of a sublingual gland.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0004558") AnnotationAssertion( "EMAPA:36564") AnnotationAssertion( "FMA:59983") AnnotationAssertion( "MA:0002699") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001838") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "sublingual duct") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (bony labyrinth) AnnotationAssertion(Annotation( ) "A system of fluid passages in the inner ear, including both the cochlea, which is part of the auditory system, and the vestibular system, which provides the sense of balance. The bony labyrinth, or osseous labyrinth, is the network of passages with bony walls lined with periosteum. The bony labyrinth is lined with the membranous labyrinth. There is a layer of perilymph between them. The three parts of the bony labyrinth are the vestibule of the ear, the semicircular canals, and the cochlea. The vestibular system is the region of the inner ear where the semicircular canals converge, close to the cochlea (the hearing organ). The vestibular system works with the visual system to keep objects in focus when the head is moving. Joint and muscle receptors also are important in maintaining balance. The brain receives, interprets, and processes the information from these systems that control our balance. [WP,unvetted].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0011078") AnnotationAssertion( "BTO:0004685") AnnotationAssertion( "CALOHA:TS-2080") AnnotationAssertion( "EMAPA:36580") AnnotationAssertion( "EV:0100362") AnnotationAssertion( "FMA:60179") AnnotationAssertion( "MA:0000238") AnnotationAssertion( "NCIT:C33227") AnnotationAssertion(Annotation( "ncithesaurus:Osseous_Labyrinth") "UMLS:C0458699") AnnotationAssertion( "VHOG:0001219") AnnotationAssertion( "XAO:0000193") AnnotationAssertion( "osseous labyrinth") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "labyrinthus osseus") AnnotationAssertion( "osseus labyrinth") AnnotationAssertion( "UBERON:0001839") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "Ideally we would place a spatially disjoint from relationship to membranous labyrinth, but there are many parts in common. this should be resolved.") AnnotationAssertion(rdfs:label "bony labyrinth") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/2/22/Gray920.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) Annotation( "MA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (semicircular canal) AnnotationAssertion(Annotation( ) "One of three half-circular, interconnected tubes located inside each ear[WP].") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0000431") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "Fluid-filled toroidal spaces, arranged orthogonally to each other in the ear, that detect angular accelerations. (See Anatomical Atlas entry for semicircular canals by T. Whitfield.)[TAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001144") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0030223693 Liem KF, Bemis WE, Walker WF, Grande L, Functional Anatomy of the Vertebrates: An Evolutionary Perspective (2001) p.414") "In gnathostomes, each membranous labyrinth has three semicircular ducts that connect with a chamber known as the utriculus. These ducts are sometimes called canals, but technically the term semicircular canal applies to the spaces in the osseus labyrinth in which the semicircular ducts lie.[uncertain][VHOG]") AnnotationAssertion( "detects angular acceleration") AnnotationAssertion(Annotation( "MA"^^xsd:string) "MA divides this into osseous and duct. In FMA, this is systemically part of the bony labyrinth. Note this is an anatomical space in ZFA. The MA treatment has advantages for representing the neuroepithelium, which should not be part of bone. Also check duct vs canal") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0011098") AnnotationAssertion( "BTO:0003383") AnnotationAssertion( "CALOHA:TS-2164") AnnotationAssertion( "EMAPA:32832") AnnotationAssertion( "EV:0100365") AnnotationAssertion( "FMA:60186") AnnotationAssertion( "GAID:776") AnnotationAssertion( "MA:0000249") AnnotationAssertion( "MESH:D012665") AnnotationAssertion( "NCIT:C33527") AnnotationAssertion( "TAO:0000431") AnnotationAssertion(Annotation( "ncithesaurus:Semicircular_Canal") "UMLS:C0036622") AnnotationAssertion( "VHOG:0001144") AnnotationAssertion( "XAO:0000198") AnnotationAssertion( "ZFA:0000431") AnnotationAssertion(Annotation( "TAO:0000431") Annotation( ) "semicircular canals") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "canalis semicircularis") AnnotationAssertion(Annotation( "BTO:0003383") Annotation( "FMA:71880") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "ductus semicirculares") AnnotationAssertion(Annotation( "TAO:0000431") "scc") AnnotationAssertion(Annotation( "XAO:0000198") Annotation( ) "semicircular ducts") AnnotationAssertion( "UBERON:0001840") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "semicircular canal") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/3/33/Balance_Disorder_Illustration_A.png"^^xsd:anyURI) SubClassOf(Annotation( "GO"^^xsd:string) ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "OG") ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (anterior semicircular canal) AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0000314") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "One of three fluid-filled toroidal spaces, arranged orthogonally to each other in each ear, that detect angular acceleration. (See Anatomical Atlas entry for semicircular canals by T. Whitfield.)[TAO]") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0000314") Annotation( "TAO"^^xsd:string) "relationship loss: develops_from anterior semicircular canal primordium (TAO:0000469)[TAO]") AnnotationAssertion( "detects angular acceleration") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0000058") AnnotationAssertion( "EHDAA2:0001959") AnnotationAssertion( "EHDAA:7802") AnnotationAssertion( "EMAPA:17299") AnnotationAssertion( "FMA:60187") AnnotationAssertion( "MA:0001207") AnnotationAssertion( "NCIT:C33695") AnnotationAssertion( "TAO:0000314") AnnotationAssertion(Annotation( "ncithesaurus:Superior_Semicircular_Canal") "UMLS:C1288332") AnnotationAssertion( "ZFA:0000314") AnnotationAssertion( "superior semicircular canal") AnnotationAssertion( "uberon") AnnotationAssertion( "anterior semicircular canals") AnnotationAssertion( "anterior semicircular duct") AnnotationAssertion(Annotation( "AAO:0000058") "canalis semircularis posterior") AnnotationAssertion( "rostral vertical semicircular canal") AnnotationAssertion( "UBERON:0001841") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "anterior semicircular canal") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/1/16/Gray921.png"^^xsd:anyURI) SubClassOf( ) DisjointClasses(Annotation( "lexical"^^xsd:string) ) # Class: (posterior semicircular canal) AnnotationAssertion(Annotation( ) "The posterior semicircular canal is a part of the vestibular system and detects rotations of the head in the sagittal plane.") AnnotationAssertion( "verify AAO") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0000262") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "One of three fluid-filled toroidal spaces, arranged orthogonally to each other in each ear, that detect angular acceleration. (See Anatomical Atlas entry for semicircular canals by T. Whitfield.)[TAO]") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0000262") Annotation( "TAO"^^xsd:string) "relationship loss: develops_from posterior semicircular canal primordium (TAO:0000412)[TAO]") AnnotationAssertion( "detects angular acceleration") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0000420") AnnotationAssertion( "EHDAA2:0001489") AnnotationAssertion( "EHDAA:7796") AnnotationAssertion( "EMAPA:17296") AnnotationAssertion( "FMA:60190") AnnotationAssertion( "MA:0001209") AnnotationAssertion( "NCIT:C33378") AnnotationAssertion( "TAO:0000262") AnnotationAssertion(Annotation( "ncithesaurus:Posterior_Semicircular_Canal") "UMLS:C0229454") AnnotationAssertion( "ZFA:0000262") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "canalis semicircularis posterior") AnnotationAssertion( "caudal vertical semicircular canal") AnnotationAssertion(Annotation( "AAO:0000420") "pars superior of labyrinth") AnnotationAssertion( "posterior semicircular canals") AnnotationAssertion( "posterior semicircular duct") AnnotationAssertion( "UBERON:0001842") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "posterior semicircular canal") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/1/16/Gray921.png"^^xsd:anyURI) SubClassOf( ) # Class: (lateral semicircular canal) AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0000220") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "One of three fluid-filled toroidal spaces, arranged orthogonally to each other in each ear, that detect angular acceleration. (See Anatomical Atlas entry for semicircular canals by T. Whitfield.)[TAO]") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0000220") Annotation( "TAO"^^xsd:string) "relationship loss: develops_from lateral semicircular canal primordium (TAO:0000232)[TAO]") AnnotationAssertion( "detects angular acceleration") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0000920") AnnotationAssertion( "EHDAA:7790") AnnotationAssertion( "EMAPA:17821") AnnotationAssertion( "FMA:60193") AnnotationAssertion( "MA:0001208") AnnotationAssertion( "TAO:0000220") AnnotationAssertion( "ZFA:0000220") AnnotationAssertion( "uberon") AnnotationAssertion( "horizontal semicircular canal") AnnotationAssertion( "lateral semicircular canals") AnnotationAssertion( "lateral semicircular duct") AnnotationAssertion( "UBERON:0001843") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "lateral semicircular canal") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/1/16/Gray921.png"^^xsd:anyURI) SubClassOf( ) # Class: (cochlea) AnnotationAssertion(Annotation( ) Annotation( "ISBN:0-683-40008-8"^^xsd:string) Annotation( "MP:0000031") "The spiral-shaped bony canal in the inner ear containing the hair cells that transduce sound. Its core component is the Organ of Corti, the sensory organ of hearing, which is distributed along the partition separating fluid chambers in the coiled tapered tube of the cochlea. [WP,modified].") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000691") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( ) "A spiral-shaped cavity in the petrous portion of the temporal bone of the inner ear, containing the nerve endings essential for hearing and forming one of the divisions of the labyrinth. [TFD][VHOG]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000691") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "DOI:10.1016/S0959-4388(98)80033-0 Manley GA, Koeppl C, Phylogenetic development of the cochlea and its innervation. Current Opinion in Neurobiology (1998)") "Because achieving high sensitivity is generally advantageous for auditory organs, it is not surprising that evidence for cochlear amplification is also seen in nonmammals. Spontaneous otoacoustic emissions (SOAEs) are narrow-band sound signals emitted from the inner ear, and it is generally assumed that their energy derives from the hair-cell molecular motors underlying cochlear amplification. However, all terrestrial vertebrates studied so far (including amphibians) show very similar SOAEs. The most parsimonious explanation for the universality of this phenomena is that some kind of amplifying mechanism is at least as old as land vertebrates themselves.[well established][VHOG]") AnnotationAssertion( "cochlear") AnnotationAssertion( "The association with 'lagena' in frog and fish comes from HOG, although HOG is inconsistent here, associating lagena with XAO cochlea and ZFA cochlear duct. NBK53175 says: 'In contrast, the ventrally located auditory chambers have undergone more extensive evolutionary modifications. The saccule and lagena are prominent auditory organs in fish but the saccule has a vestibular role in mammals and birds, and the lagena is absent in mammals. The primary au- ditory organ in mammals and birds is the cochlea, which has no known counterpart in amphibians and fish (Riley and Phillips, 2003)'") AnnotationAssertion( "the cochlea is coiled in most mammals, monotremes being the exceptions.") AnnotationAssertion(Annotation( "XAO"^^xsd:string) "sources vary in connection to bony labyrinth") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0000253") AnnotationAssertion( "BIRNLEX:1190") AnnotationAssertion( "BTO:0000267") AnnotationAssertion( "CALOHA:TS-0151") AnnotationAssertion( "EFO:0000357") AnnotationAssertion( "EMAPA:17597") AnnotationAssertion( "EV:0100363") AnnotationAssertion( "FMA:60201") AnnotationAssertion( "GAID:724") AnnotationAssertion( "MA:0000240") AnnotationAssertion( "MAT:0000144") AnnotationAssertion( "MESH:D003051") AnnotationAssertion( "MIAA:0000144") AnnotationAssertion( "NCIT:C12395") AnnotationAssertion( "NIFSTD_RETIRED:birnlex_883") AnnotationAssertion( "OpenCyc:Mx4rvqfJmJwpEbGdrcN5Y29ycA") AnnotationAssertion( "TAO:0000374") AnnotationAssertion(Annotation( "BIRNLEX:1190") "UMLS:C0009195") AnnotationAssertion(Annotation( "ncithesaurus:Cochlea") "UMLS:C0009195") AnnotationAssertion(Annotation( "BIRNLEX:1190") "UMLS:C1278895") AnnotationAssertion( "VHOG:0000691") AnnotationAssertion( "XAO:0000197") AnnotationAssertion( "ZFA:0000374") AnnotationAssertion( "cochlear part of bony labyrinth") AnnotationAssertion(Annotation( "XAO:0000197") Annotation( ) "lagena") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "cochleae") AnnotationAssertion( "cochlear duct") AnnotationAssertion(Annotation( "BTO:0000267") "cochlear organ") AnnotationAssertion(Annotation( "ZFA:0000374") Annotation( ) "lagenas") AnnotationAssertion( "UBERON:0001844") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "cochlea") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/c/c7/Cochlea-crosssection.png"^^xsd:anyURI) AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/c/cb/Cochlea-crosssection.svg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) Annotation( "VHOG"^^xsd:string) Annotation( "XAO"^^xsd:string) Annotation( "ncit") ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (perilymph) AnnotationAssertion(Annotation( ) Annotation( "FMA:FMA"^^xsd:string) "Transudate contained in the osseous labyrinth outside the membranous labyrinth.[FMA].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:36549") AnnotationAssertion( "FMA:60908") AnnotationAssertion( "GAID:1185") AnnotationAssertion( "MA:0002529") AnnotationAssertion( "MESH:A12.207.571.678") AnnotationAssertion( "NCIT:C33297") AnnotationAssertion( "TAO:0005413") AnnotationAssertion(Annotation( "ncithesaurus:Perilymph") "UMLS:C0031059") AnnotationAssertion( "ZFA:0005413") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "liquor cotunnii") AnnotationAssertion(Annotation( ) "perilympha") AnnotationAssertion( "UBERON:0001845") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "perilymph") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "Wikipedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (internal ear) AnnotationAssertion(Annotation( ) Annotation( ) Annotation( "ZFIN:curator"^^xsd:string) "Complex labyrinthine structure that comprises sensory endorgans specialized for vestibular, auditory, and acoustico-vestibular sensation.") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0000217") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "The auditory (hearing) and vestibular (balance) organ of the fish, equivalent to the inner ear of amniotes. (See Anatomical Atlas entry for ear by T. Whitfield.)[TAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000284") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0471090588 Hildebrand M, Analysis of vertebrate structure (1983) p.366") "The labyrinth, or inner ear, evolved very early in vertebrate history and, with many variations in configuration but none of basic design and function, has been retained by all vertebrates.[well established][VHOG]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0000238") AnnotationAssertion( "BIRNLEX:1196") AnnotationAssertion( "BTO:0000630") AnnotationAssertion( "CALOHA:TS-0478") AnnotationAssertion( "EFO:0001363") AnnotationAssertion( "EHDAA2:0000831") AnnotationAssertion( "EHDAA:504") AnnotationAssertion( "EMAPA:16194") AnnotationAssertion( "EV:0100361") AnnotationAssertion( "FMA:60909") AnnotationAssertion( "GAID:871") AnnotationAssertion( "MA:0000237") AnnotationAssertion( "MAT:0000145") AnnotationAssertion( "MESH:D007758") AnnotationAssertion( "MIAA:0000145") AnnotationAssertion( "NCIT:C12499") AnnotationAssertion( "OpenCyc:Mx4rwJ8SsJwpEbGdrcN5Y29ycA") AnnotationAssertion( "TAO:0000217") AnnotationAssertion(Annotation( "BIRNLEX:1196") "UMLS:C0022889") AnnotationAssertion(Annotation( "ncithesaurus:Internal_Ear") "UMLS:C0022889") AnnotationAssertion(Annotation( "BIRNLEX:1196") "UMLS:C1268973") AnnotationAssertion( "VHOG:0000284") AnnotationAssertion( "XAO:0000192") AnnotationAssertion( "ZFA:0000217") AnnotationAssertion( "galen:InnerEar") AnnotationAssertion( "inner ear") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0000630") "auris interna") AnnotationAssertion( "labyrinth") AnnotationAssertion( "otocyst") AnnotationAssertion( "UBERON:0001846") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "internal ear") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/1/19/Gray923.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "definitional"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (lobule of pinna) AnnotationAssertion(Annotation( ) "The soft lower part of the external ear, projecting below the antitragus.") AnnotationAssertion(Annotation( "WP,unvetted") "The earlobe is composed of tough areolar and adipose (fatty) connective tissues, lacking the firmness and elasticity of the rest of the pinna. Since the earlobe does not contain cartilage the earlobe has a large blood supply and may help to warm the ears and maintain balance but generally earlobes are not considered to have any major biological function.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:60984") AnnotationAssertion( "MA:0002468") AnnotationAssertion( "NCIT:C32999") AnnotationAssertion(Annotation( "ncithesaurus:Lobule_of_the_Auricle") "UMLS:C0229315") AnnotationAssertion( "auricular lobule") AnnotationAssertion( "ear lobe") AnnotationAssertion( "earlobe") AnnotationAssertion( "lobe of ear") AnnotationAssertion( "lobule of auricle of ear") AnnotationAssertion(Annotation( "FMA:60984") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "lobulus auriculae") AnnotationAssertion( "pinna lobule") AnnotationAssertion( "uberon") AnnotationAssertion( "ear lobule") AnnotationAssertion( "lobule of auricle") AnnotationAssertion( "UBERON:0001847") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "lobule of pinna") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (auricular cartilage) AnnotationAssertion(Annotation( ) "Cartilage of the pinna and much of the external ear canal.") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:35158") AnnotationAssertion( "FMA:61013") AnnotationAssertion( "MA:0001227") AnnotationAssertion(Annotation( "FMA:61013") "cartilage of pinna") AnnotationAssertion( "pinna cartilage") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001848") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "auricular cartilage") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (membranous labyrinth) AnnotationAssertion(Annotation( ) Annotation( "FMA:61022") "Organ with organ cavity which consists of the vestibular labyrinth and the cochlear labyrinth. The membranous labyrinth is lodged within the bony labyrinth and has the same general form; it is, however, considerably smaller and is partly separated from the bony walls by a quantity of fluid, the perilymph.[FMA, WP].") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000729") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( ) "A system of communicating epithelial sacs and ducts within the bony labyrinth, containing the endolymph. [TFD][VHOG]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000729") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0471090588 Hildebrand M, Analysis of vertebrate structure (1983) p.366") "The labyrinth, or inner ear, evolved very early in vertebrate history and, with many variations in configuration but none of basic design and function, has been retained by all vertebrates.[well established][VHOG]") AnnotationAssertion(Annotation( "EMAPA"^^xsd:string) "inner ear has parts membranous and osseuous/bony labyrinth. it's not clear where the EMAPA term 'labyrinth' belong, we place them here for now") AnnotationAssertion( "UBERON:0010113") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0011060") AnnotationAssertion( "EHDAA2:0000899") AnnotationAssertion( "EHDAA:4698") AnnotationAssertion( "EMAPA:17815") AnnotationAssertion( "EV:0100367") AnnotationAssertion( "FMA:61022") AnnotationAssertion( "MA:0000242") AnnotationAssertion( "NCIT:C33090") AnnotationAssertion(Annotation( "ncithesaurus:Membranous_Labyrinth") "UMLS:C0458700") AnnotationAssertion( "VHOG:0000729") AnnotationAssertion( "XAO:0000194") AnnotationAssertion(Annotation( ) Annotation( ) "labyrinthus membranaceus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001849") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "membranous labyrinth") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/8/8c/Gray924.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) Annotation( "MA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lacrimal drainage system) AnnotationAssertion(Annotation( ) "A collection of channels that connects the conjunctival sac with the nasal cavity, encompassing the lacrimal ducts, the lacrimal sac and the naso-lacrimal duct.") AnnotationAssertion( "TODO - resolve lacrimal canaliculus vs larcimal duct") AnnotationAssertion(Annotation( ) ) AnnotationAssertion( "chelonians lack a lacrimal duct, and lacrimal/harderian secretions remain in or spill from the conjunctival sac[PMID:7559104]") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:19245") AnnotationAssertion( "FMA:61063") AnnotationAssertion( "MA:0001295") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:61063") Annotation( "MA:0001295") "lacrimal duct") AnnotationAssertion(Annotation( "MA:0001295") "tear duct") AnnotationAssertion( "UBERON:0001850") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "lacrimal drainage system") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (cortex) AnnotationAssertion(Annotation( ) "Outermost layer of an organ[WP].") AnnotationAssertion( "cortical") AnnotationAssertion(Annotation( "FMA"^^xsd:string) "this class is used more generically than in FMA, and includes e.g. cortex of hair") AnnotationAssertion( ) AnnotationAssertion( "EFO:0000383") AnnotationAssertion( "EHDAA:9344") AnnotationAssertion( "FMA:61109") AnnotationAssertion( "galen:Cortex") AnnotationAssertion(Annotation( "FMA:61109") "cortex") AnnotationAssertion( "cortex of organ") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001851") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "cortex") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (endolymph) AnnotationAssertion(Annotation( ) Annotation( "FMA:61112") "Transudate contained within the membranous labyrinth.[FMA].") AnnotationAssertion( "otolymphic") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:36548") AnnotationAssertion( "FMA:61112") AnnotationAssertion( "GAID:1184") AnnotationAssertion( "MA:0002528") AnnotationAssertion( "MESH:A12.207.571.324") AnnotationAssertion( "NCIT:C32513") AnnotationAssertion( "TAO:0005414") AnnotationAssertion(Annotation( "ncithesaurus:Endolymph") "UMLS:C0014166") AnnotationAssertion( "ZFA:0005414") AnnotationAssertion( "endolymphatic fluid") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "Scarpa's fluid") AnnotationAssertion(Annotation( ) "endolympha") AnnotationAssertion(Annotation( ) Annotation( ) "endolympha") AnnotationAssertion( "UBERON:0001852") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "endolymph") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/c/c7/Cochlea-crosssection.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (utricle of membranous labyrinth) AnnotationAssertion(Annotation( ) Annotation( ) Annotation( "ISBN:0-8036-0655-9") Annotation( "MGI:smb"^^xsd:string) Annotation( "MP:0006090") "The larger of the two otolith organs in the vestibule.") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000289") Annotation( "VHOG"^^xsd:string) Annotation( ) "The portion of the membranous labyrinth of the ear into which the semicircular ducts find their outlet. [Elsevier's_encyclopaedic_dictionary_of_medicine, Part_B:_Anatomy_(1988)_Amsterdam_etc.:_Elsevier, adapted_from_Dorian_AF][VHOG]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000289") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0030223693 Liem KF, Bemis WE, Walker WF, Grande L, Functional Anatomy of the Vertebrates: An Evolutionary Perspective (2001) p.413-414") "In gnathostomes, each membranous labyrinth has three semicircular ducts that connect with a chamber known as the utriculus.[well established][VHOG]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0000625") AnnotationAssertion( "AAO:0011109") AnnotationAssertion( "BTO:0001807") AnnotationAssertion( "EHDAA2:0002153") AnnotationAssertion( "EHDAA:4726") AnnotationAssertion( "EMAPA:17293") AnnotationAssertion( "EV:0100368") AnnotationAssertion( "FMA:61113") AnnotationAssertion( "MA:0000247") AnnotationAssertion( "NCIT:C33844") AnnotationAssertion( "TAO:0000700") AnnotationAssertion(Annotation( "ncithesaurus:Utricle") "UMLS:C0042158") AnnotationAssertion( "VHOG:0000289") AnnotationAssertion( "XAO:0000195") AnnotationAssertion( "ZFA:0000700") AnnotationAssertion( "membranous labyrinth utricle") AnnotationAssertion( "utricle") AnnotationAssertion(Annotation( "ZFA:0000700") "utriculus") AnnotationAssertion( "utriculus (labyrinthus vestibularis)") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001853") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "XAO/AAO to be checked - see https://github.com/seger/aao/issues/5; AAO has both utricle and utriculus; these are generally considered synonyms - e.g. http://www.fishbase.org/glossary/Glossary.php?q=utriculus") AnnotationAssertion(rdfs:label "utricle of membranous labyrinth") SubClassOf(Annotation( "Wikipedia"^^xsd:string) Annotation( "ZFA"^^xsd:string) ) # Class: (saccule of membranous labyrinth) AnnotationAssertion(Annotation( ) Annotation( ) Annotation( "ISBN:0-8036-0655-9") Annotation( "MGI:smb"^^xsd:string) Annotation( "MP:0006089") "The smaller of the two otolith organs in the vestibule.") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000374") Annotation( "VHOG"^^xsd:string) Annotation( ) "The most ventral chamber of the membranous labyrinth. [Bemis_WE, Functional_Anatomy_of_the_Vertebrates:_An_Evolutionary_Perspective, Glossary_G-25, Grande_L, Liem_KF, Third_Edition_(2001)_Orlando_Fla.:_Harcourt_College_Publishers, Walker_WF][VHOG]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000374") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0030223693 Liem KF, Bemis WE, Walker WF, Grande L, Functional Anatomy of the Vertebrates: An Evolutionary Perspective (2001) p.413-414") "In gnathostomes, each membranous labyrinth has three semicircular ducts that connect with a chamber known as the utriculus. (...) In all gnathostomes, the utriculus connects ventrally with a larger sac, called the sacculus (...) .[well established][VHOG]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0000550") AnnotationAssertion( "BTO:0001805") AnnotationAssertion( "EHDAA2:0001769") AnnotationAssertion( "EHDAA:4712") AnnotationAssertion( "EMAPA:17290") AnnotationAssertion( "EV:0100369") AnnotationAssertion( "FMA:61116") AnnotationAssertion( "MA:0000246") AnnotationAssertion( "NCIT:C33503") AnnotationAssertion( "TAO:0000428") AnnotationAssertion(Annotation( "ncithesaurus:Saccule") "UMLS:C0036029") AnnotationAssertion( "VHOG:0000374") AnnotationAssertion( "XAO:0000196") AnnotationAssertion( "ZFA:0000428") AnnotationAssertion( "membranous labyrinth saccule") AnnotationAssertion( "saccule") AnnotationAssertion(Annotation( "ZFA:0000428") "sacculus") AnnotationAssertion( "sacculus (labyrinthus vestibularis)") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "sacculus") AnnotationAssertion( "UBERON:0001854") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "XAO/AAO to be checked - see https://github.com/seger/aao/issues/5") AnnotationAssertion(rdfs:label "saccule of membranous labyrinth") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/c/cb/Bigotolith.jpg"^^xsd:anyURI) SubClassOf(Annotation( "Wikipedia"^^xsd:string) Annotation( "ZFA"^^xsd:string) ) # Class: (cochlear duct of membranous labyrinth) AnnotationAssertion(Annotation( ) "An endolymph filled cavity inside the cochlea, located in between the scala tympani and the scala vestibuli, separated by the basilar membrane and Reissner's membrane (the vestibular membrane) respectively. Houses the organ of Corti[WP].") AnnotationAssertion( "TODO - check cochlear duct vs cochlear aqueduct vs scala media") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000507") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( ) "The coiled portion of the membranous labyrinth located inside the cochlea. It contains endolymph. [TFD][VHOG]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000507") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0030223693 Liem KF, Bemis WE, Walker WF, Grande L, Functional Anatomy of the Vertebrates: An Evolutionary Perspective (2001) p.413-414") "In gnathostomes, each membranous labyrinth has three semicircular ducts that connect with a chamber known as the utriculus. (...) In all gnathostomes, the utriculus connects ventrally with a larger sac, called the sacculus (...) In most groups of gnathostomes, the caudoventral evagination of the sacculus forms a small lagena, and in some diapsids and mammals the lagena develops into a longer duct. The lagena becomes greatly elongated in therians and coils to form the cochlear duct.[well established][VHOG]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:2562") AnnotationAssertion( "BTO:0001692") AnnotationAssertion( "CALOHA:TS-0152") AnnotationAssertion( "EHDAA2:0000262") AnnotationAssertion( "EHDAA:4718") AnnotationAssertion( "EMAPA:17598") AnnotationAssertion( "FMA:61119") AnnotationAssertion( "GAID:874") AnnotationAssertion( "MA:0000243") AnnotationAssertion( "MESH:D003053") AnnotationAssertion( "NCIT:C32335") AnnotationAssertion(Annotation( "BIRNLEX:2562") "UMLS:C1281166") AnnotationAssertion(Annotation( "BIRNLEX:2562") "UMLS:C1323110") AnnotationAssertion(Annotation( "ncithesaurus:Cochlear_Duct") "UMLS:C1323110") AnnotationAssertion( "VHOG:0000507") AnnotationAssertion(Annotation( "FMA:61119") "Reissner's canal") AnnotationAssertion(Annotation( "BIRNLEX:2562") "Reissners canal") AnnotationAssertion(Annotation( "BIRNLEX:2562") "cochlea duct") AnnotationAssertion( "cochlear duct") AnnotationAssertion(Annotation( "BIRNLEX:2562") "scala medias") AnnotationAssertion( "uberon") AnnotationAssertion( "cochlear aqueduct") AnnotationAssertion(Annotation( ) Annotation( ) "ductus cochlearis") AnnotationAssertion(Annotation( "BTO:0001692") Annotation( ) "ductus cochlearis") AnnotationAssertion(Annotation( "BTO:0001692") "membranous cochlea") AnnotationAssertion(Annotation( ) "scala media") AnnotationAssertion(Annotation( "BTO:0001692") "scala of Loewenberg") AnnotationAssertion( "UBERON:0001855") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "cochlear duct of membranous labyrinth") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/b/bc/Gray928.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) Annotation( "MA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (semicircular duct) AnnotationAssertion(Annotation( ) "Any of the three loop-shaped membranous inner tubular parts of the semicircular canals that are about one-fourth the diameter of the corresponding outer bony canals, that communicate at each end with the utricle, and that have near one end an expanded ampulla containing an area of sensory epithelium.") AnnotationAssertion( "TODO - check canal vs duct. see Wikipedia:File:Gray927.png") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000238") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0030223693 Liem KF, Bemis WE, Walker WF, Grande L, Functional Anatomy of the Vertebrates: An Evolutionary Perspective (2001) p.413-414 and p.58") "In gnathostomes, each membranous labyrinth has three semicircular ducts that connect with a chamber known as the utriculus (...); Gnathostome ears have a horizontal semicircular duct. This brings their complement to three semicircular ducts, a pattern retained throughout gnathostome evolution.[well established][VHOG]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:32830") AnnotationAssertion( "FMA:61122") AnnotationAssertion( "MA:0000251") AnnotationAssertion( "NCIT:C33528") AnnotationAssertion(Annotation( "ncithesaurus:Semicircular_Duct") "UMLS:C1323109") AnnotationAssertion( "VHOG:0000238") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:71880") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "ductus semicirculares") AnnotationAssertion(Annotation( "MA:0000251") "membranous semicircular canal") AnnotationAssertion( "UBERON:0001856") AnnotationAssertion(rdfs:label "semicircular duct") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "MA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA"^^xsd:string) Annotation( "MA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (anterior semicircular duct) AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000246") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0030223693 Liem KF, Bemis WE, Walker WF, Grande L, Functional Anatomy of the Vertebrates: An Evolutionary Perspective (2001) p.53 and p.413-414") "Vertebrata is characterized by three synapomorphies. (...) Vertebrates also have at least two vertical semicircular ducts (...). In gnathostomes, each membranous labyrinth has three semicircular ducts that connect with a chamber known as the utriculus.[well established][VHOG]") AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37411") AnnotationAssertion( "FMA:61123") AnnotationAssertion( "MA:0001211") AnnotationAssertion( "VHOG:0000246") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "VHOG:0000246") "superior semicircular duct") AnnotationAssertion( "UBERON:0001857") AnnotationAssertion(rdfs:label "anterior semicircular duct") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses(Annotation( "lexical"^^xsd:string) ) # Class: (posterior semicircular duct) AnnotationAssertion(Annotation( ) "The semicircular canals are three half-circular, interconnected tubes located inside each ear. The three canals are the horizontal semicircular canal (also known as the lateral semicircular canal), superior semicircular canal (also known as the anterior semicircular canal), and the posterior semicircular canal. The canals are aligned approximately orthogonally to one another. The horizontal canal is aligned roughly horizontally in the head. The superior and anterior canals are aligned roughly at a 45 degree angle to a vertical plane drawn from the nose to the back of the skull. Thus, the horizontal canal detects horizontal head movements (such as when doing a pirouette), while the superior and posterior canals detect vertical head movements. Each canal is filled with a fluid called endolymph and contains a motion sensor with little hairs whose ends are embedded in a gelatinous structure called the cupula. As the skull twists in any direction, the endolymph is thrown into different sections of the canals. The cilia detect when the endolymph rushes past, and a signal is then sent to the brain. The semicircular canals are a component of the Labyrinth. Among species of mammals, the size of the semicircular canals is correlated with their type of locomotion. Specifically, species that are agile and have fast, jerky locomotion have larger canals relative to their body size than those that move more cautiously.") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000248") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0030223693 Liem KF, Bemis WE, Walker WF, Grande L, Functional Anatomy of the Vertebrates: An Evolutionary Perspective (2001) p.53 and p.413-414") "Vertebrata is characterized by three synapomorphies. (...) Vertebrates also have at least two vertical semicircular ducts (...). In gnathostomes, each membranous labyrinth has three semicircular ducts that connect with a chamber known as the utriculus.[well established][VHOG]") AnnotationAssertion(Annotation( "WP"^^xsd:string) "detect vertical head movements") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37413") AnnotationAssertion( "FMA:61126") AnnotationAssertion( "MA:0001214") AnnotationAssertion( "VHOG:0000248") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001858") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "posterior semicircular duct") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/3/33/Balance_Disorder_Illustration_A.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lateral semicircular duct) AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000247") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0030223693 Liem KF, Bemis WE, Walker WF, Grande L, Functional Anatomy of the Vertebrates: An Evolutionary Perspective (2001) p.413-414") "Gnathostome ears have a horizontal semicircular duct. This brings their complement to three semicircular ducts, a pattern retained throughout gnathostome evolution. [ISBN:978-0030223693 Liem KF, Bemis WE, Walker WF, Grande L, Functional Anatomy of the Vertebrates: An Evolutionary Perspective (2001) p.58] ; In gnathostomes, each membranous labyrinth has three semicircular ducts that connect with a chamber known as the utriculus.[well established][VHOG]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37412") AnnotationAssertion( "FMA:61129") AnnotationAssertion( "MA:0001213") AnnotationAssertion( "VHOG:0000247") AnnotationAssertion( "uberon") AnnotationAssertion( "external semicircular duct") AnnotationAssertion( "UBERON:0001859") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "lateral semicircular duct") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/1/16/Gray921.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (endolymphatic duct) AnnotationAssertion(Annotation( "MGI:anna"^^xsd:string) Annotation( "MGI:smb"^^xsd:string) Annotation( "MP:0006011") "The small membranous canal, connecting with both saccule and utricle of the membranous labyrinth, passing through the aqueduct of vestibule, and terminating in the endolymphatic sac.") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0002194") Annotation( "TAO"^^xsd:string) Annotation( ) "Duct that is part of the inner ear and connects to the semicircular canals ending in a pouch.[TAO]") AnnotationAssertion( "endolymphatic") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0000135") AnnotationAssertion( "EMAPA:18580") AnnotationAssertion( "FMA:61246") AnnotationAssertion( "GAID:886") AnnotationAssertion( "MA:0001187") AnnotationAssertion( "MESH:D004711") AnnotationAssertion( "TAO:0002194") AnnotationAssertion( "ZFA:0001705") AnnotationAssertion(Annotation( "AAO:0000135") Annotation( ) "ductus endolymphaticus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "ductus endolymphaticus") AnnotationAssertion( "UBERON:0001860") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "endolymphatic duct") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/8/8c/Gray924.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (ductus reuniens) AnnotationAssertion(Annotation( ) "The canalis reuniens of Hansen is part of the human inner ear. It connects the lower part of the saccule to the ductus cochlearis near its vestibular extremity.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:17287") AnnotationAssertion( "FMA:61252") AnnotationAssertion( "MA:0000244") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "Hensen duct") AnnotationAssertion(Annotation( ) "Hensen's duct") AnnotationAssertion(Annotation( ) "canal of Henson") AnnotationAssertion(Annotation( ) "canalis reuniens") AnnotationAssertion(Annotation( ) "canalis reuniens of Hensen") AnnotationAssertion( "UBERON:0001861") AnnotationAssertion(rdfs:label "ductus reuniens") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "EMAPA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "Wikipedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "Wikipedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (vestibular labyrinth) AnnotationAssertion(Annotation( "BTO:0001856") "The part of the membranous labyrinth that includes the utricle and saccule lodged within the vestibule and the semicircular ducts lodged eccentrically in the corresponding canals.") AnnotationAssertion( "vestibular component") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0001856") AnnotationAssertion( "CALOHA:TS-0479") AnnotationAssertion( "EHDAA2:0000832") AnnotationAssertion( "EHDAA:4706") AnnotationAssertion( "EMAPA:17286") AnnotationAssertion( "EMAPA:17815") AnnotationAssertion( "FMA:61255") AnnotationAssertion( "MA:0000245") AnnotationAssertion( "NCIT:C33871") AnnotationAssertion(Annotation( "ncithesaurus:Vestibular_Labyrinth") "UMLS:C0042606") AnnotationAssertion( "XAO:0004145") AnnotationAssertion(Annotation( "EHDAA2:0000832") "inner ear vestibular component") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0001856") "labyrinthus vestibularis") AnnotationAssertion( "vestibular apparatus") AnnotationAssertion( "UBERON:0001862") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "vestibular labyrinth") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (scala vestibuli) AnnotationAssertion(Annotation( "MGI:anna"^^xsd:string) Annotation( "MP:0003168") "The division of the spiral canal of the cochlea lying on the apical side of the spiral lamina and vestibular membrane.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:35753") AnnotationAssertion( "FMA:61269") AnnotationAssertion( "MA:0001206") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001863") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "scala vestibuli") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/0/0c/Cochlea-crosssection.png"^^xsd:anyURI) AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/1/19/Gray923.png"^^xsd:anyURI) SubClassOf(Annotation( "MA"^^xsd:string) ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (scala tympani) AnnotationAssertion(Annotation( "MGI:anna"^^xsd:string) Annotation( "MP:0003167") "The division of the spiral canal of the cochlea lying on the basal side of the spiral lamina.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:35752") AnnotationAssertion( "FMA:61272") AnnotationAssertion( "GAID:879") AnnotationAssertion( "MA:0001205") AnnotationAssertion( "MESH:D012533") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001864") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "scala tympani") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/1/16/Gray921.png"^^xsd:anyURI) SubClassOf(Annotation( "MA"^^xsd:string) ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (cartilaginous external acoustic tube) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37525") AnnotationAssertion( "FMA:61289") AnnotationAssertion( "MA:0001234") AnnotationAssertion( "cartilaginous external acoustic meatus") AnnotationAssertion( "cartilaginous part of external acoustic meatus") AnnotationAssertion( "external acoustic meatus cartilaginous part") AnnotationAssertion(Annotation( "FMA:61289") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "meatus acusticus externus cartilagineus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001865") AnnotationAssertion(rdfs:label "cartilaginous external acoustic tube") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (sebum) AnnotationAssertion(Annotation( ) Annotation( "BTO:0001981") "Fatty lubricant matter secreted by sebaceous glands, and made of made of triglyceride oils, wax, squalene, and metabolytes of fat-producing cells[BTO,WP].") AnnotationAssertion( "The composition of sebum varies across species. In humans, the lipid content is as follows: 25% wax monoesters, 41% triglycerides, 16% free fatty acids, 12% squalene; Sapienic acid is a sebum fatty acid that is unique to humans.") AnnotationAssertion( "waterproofs skin") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0001981") AnnotationAssertion( "ENVO:02000037") AnnotationAssertion( "FMA:61304") AnnotationAssertion( "GAID:1168") AnnotationAssertion( "MA:0002538") AnnotationAssertion( "MESH:D012629") AnnotationAssertion( "NCIT:C13276") AnnotationAssertion(Annotation( "ncithesaurus:Sebum") "UMLS:C0036511") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001866") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "sebum") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (cartilage of external ear) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A cartilage that is part of a external ear [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37706") AnnotationAssertion( "FMA:61339") AnnotationAssertion( "GAID:103") AnnotationAssertion( "MA:0001886") AnnotationAssertion( "MESH:A02.165.207") AnnotationAssertion( "NCIT:C49225") AnnotationAssertion(Annotation( "ncithesaurus:External_Ear_Cartilage") "UMLS:C0013445") AnnotationAssertion( "external ear cartilage") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001867") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "cartilage of external ear") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (skin of chest) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A zone of skin that is part of a chest [Automatically generated definition].") AnnotationAssertion( "check FMA:61415") AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37279") AnnotationAssertion( "FMA:61416") AnnotationAssertion( "MA:0000553") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "anterior thoracic region zone of skin") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "anterolateral part of thorax zone of skin") AnnotationAssertion( "chest skin") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "chest zone of skin") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "front of thorax zone of skin") AnnotationAssertion(Annotation( "FMA:61416") "zone of skin of anterior chest") AnnotationAssertion(Annotation( "FMA:61416") "zone of skin of anterior part of thorax") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "zone of skin of anterior thoracic region") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "zone of skin of anterolateral part of thorax") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "zone of skin of chest") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "zone of skin of front of thorax") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:61417") "zone of skin of pectoral part of chest") AnnotationAssertion( "UBERON:0001868") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "skin of chest") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (cerebral hemisphere) AnnotationAssertion(Annotation( ) Annotation( "FMA:61817") "One of two bilateral, largely symmetrical organ subdivisions within the telencephalon which contain the cerebral cortex and cerebral white matter.[FMA].") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0010480") Annotation( "AAO"^^xsd:string) Annotation( "AAO:BJB"^^xsd:string) "Part of the telencephalon consisting of either of the two smooth, elongated halves of the cerebrum.[AAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001639") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "DOI:10.1146/annurev.ne.04.030181.001505 Northcutt RG, Evolution of the telencephalon in nonmammals. Ann. Rev. Neurosci. (1981)") "The presence of paired evaginated hemispheres and olfactory bulbs in both agnathan and gnathostome radiations suggests that such hemispheres were also present in the common ancestor.[well established][VHOG]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010480") AnnotationAssertion( "BAMS:HEM") AnnotationAssertion( "BIRNLEX:1042") AnnotationAssertion( "BTO:0000231") AnnotationAssertion( "CALOHA:TS-2007") AnnotationAssertion( "DMBA:15739") AnnotationAssertion( "EFO:0002521") AnnotationAssertion( "EMAPA:16653") AnnotationAssertion( "FMA:61817") AnnotationAssertion( "MA:0000133") AnnotationAssertion( "MBA:403") AnnotationAssertion( "NCIT:C12351") AnnotationAssertion( "OpenCyc:Mx4rvigx5ZwpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Cerebral_Hemisphere") "UMLS:C0228174") AnnotationAssertion(Annotation( "BIRNLEX:1042") "UMLS:C0242202") AnnotationAssertion( "VHOG:0001639") AnnotationAssertion( "galen:CerebralHemisphere") AnnotationAssertion(Annotation( "BIRNLEX:1042") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=241") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( "MA:0000133") Annotation( "VHOG:0001639") "cerebrum") AnnotationAssertion(Annotation( "VHOG:0001639") "hemisphere") AnnotationAssertion(Annotation( "BAMS:HEM") "hemispheric regions") AnnotationAssertion(Annotation( ) Annotation( ) "hemispherium cerebri") AnnotationAssertion(Annotation( "NeuroNames:241") "medial amygdalar nucleus") AnnotationAssertion(Annotation( "NeuroNames:241") Annotation( ) "nucleus amygdaloideus medialis") AnnotationAssertion(Annotation( "NeuroNames:241") Annotation( ) "nucleus medialis amygdalae") AnnotationAssertion( "UBERON:0001869") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "cerebral hemisphere") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/9/92/Hemispheres.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA-abduced-lr"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (frontal cortex) AnnotationAssertion(Annotation( "NLXANAT:20090601") "Anterior portion of the neocortex, lying anterior to the central sulcus in humans. It is bounded by the parietal cortex posteriorly and the temporal cortex laterally[NIFSTD,modified].") AnnotationAssertion(Annotation( "NLXANAT:20090601") "Anterior portion of the frontal cortex, lying anterior to the central sulcus. It is bounded by the parietal cortex posteriorly and the temporal cortex laterally.") AnnotationAssertion( ) AnnotationAssertion( "BTO:0000484") AnnotationAssertion( "DHBA:10161") AnnotationAssertion( "DMBA:16002") AnnotationAssertion( "EMAPA:35357") AnnotationAssertion( "FMA:242199") AnnotationAssertion( "GAID:674") AnnotationAssertion( "MA:0000905") AnnotationAssertion( "NLXANAT:20090601") AnnotationAssertion(Annotation( "FMA:242199") "cortex of frontal lobe") AnnotationAssertion(Annotation( "FMA:242199") "frontal lobe cortex") AnnotationAssertion(Annotation( "FMA:242199") "gray matter of frontal lobe") AnnotationAssertion( "grey matter of frontal lobe") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "DHBA:10161") "frontal neocortex") AnnotationAssertion( "UBERON:0001870") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "frontal cortex") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/b/b4/Gray729.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (temporal lobe) AnnotationAssertion(Annotation( "BIRNLEX:1160") "Lower lateral part of the cerebral hemisphere. (MSH).") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:TL") AnnotationAssertion( "BAMS:Temporal_lobe") AnnotationAssertion( "BIRNLEX:1160") AnnotationAssertion( "BTO:0001355") AnnotationAssertion( "CALOHA:TS-1020") AnnotationAssertion( "DHBA:12139") AnnotationAssertion( "EFO:0000917") AnnotationAssertion( "EMAPA:18797") AnnotationAssertion( "EV:0100169") AnnotationAssertion( "FMA:61825") AnnotationAssertion( "GAID:635") AnnotationAssertion( "HBA:4132") AnnotationAssertion( "MAT:0000508") AnnotationAssertion( "MESH:A08.186.211.730.885.213.863") AnnotationAssertion( "NCIT:C12353") AnnotationAssertion( "OpenCyc:Mx4rwQLi-ZwpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "BIRNLEX:1160") "UMLS:C0039485") AnnotationAssertion(Annotation( "ncithesaurus:Temporal_Lobe") "UMLS:C0039485") AnnotationAssertion(Annotation( "BIRNLEX:1160") "UMLS:C1268978") AnnotationAssertion(Annotation( "BIRNLEX:1160") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=125") AnnotationAssertion(Annotation( ) Annotation( ) "lobus temporalis") AnnotationAssertion( "temporal cortex") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001871") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "Boundary notes: It is bounded dorsally by the lateral fissure and posteriorly by an arbitrary border shared with the occipital lobe. [Wikipedia:Temporal_lobe]") AnnotationAssertion(rdfs:label "temporal lobe") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/9/91/Gray730.png"^^xsd:anyURI) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (parietal lobe) AnnotationAssertion(Annotation( "BIRNLEX:1148") "Upper central part of the cerebral hemisphere. (MSH).") AnnotationAssertion( "parietal region") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:Parietal_lobe") AnnotationAssertion( "BIRNLEX:1148") AnnotationAssertion( "BTO:0001001") AnnotationAssertion( "CALOHA:TS-0747") AnnotationAssertion( "DHBA:12131") AnnotationAssertion( "EFO:0000914") AnnotationAssertion( "EV:0100168") AnnotationAssertion( "FMA:61826") AnnotationAssertion( "GAID:680") AnnotationAssertion( "HBA:4084") AnnotationAssertion( "MAT:0000506") AnnotationAssertion( "MESH:A08.186.211.730.885.213.670") AnnotationAssertion( "NCIT:C12354") AnnotationAssertion( "OpenCyc:Mx4rvg-typwpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "BIRNLEX:1148") "UMLS:C0030560") AnnotationAssertion(Annotation( "ncithesaurus:Parietal_Lobe_of_the_Brain") "UMLS:C0030560") AnnotationAssertion(Annotation( "BIRNLEX:1148") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=95") AnnotationAssertion(Annotation( "FMA:61826") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "regio parietalis") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "lobus parietalis") AnnotationAssertion( "UBERON:0001872") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "parietal lobe") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/b/b2/Gray726_parietal_lobe.png"^^xsd:anyURI) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (caudate nucleus) AnnotationAssertion(Annotation( "BIRNLEX:1373") "Subcortical nucleus of telecephalic origin consisting of an elongated gray mass lying lateral to and bordering the lateral ventricle. It is divided into a head, body and tail in some species.") AnnotationAssertion(Annotation( "FMA:61833") "Nucleus of brain which is an elongated crescent-shaped mass lying parallel and adjacent to the lateral ventricle throughout its extent[FMA:61833].") AnnotationAssertion( "UBERON:0010122") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:CA") AnnotationAssertion( "BAMS:Cd") AnnotationAssertion( "BIRNLEX:1373") AnnotationAssertion( "BM:Tel-CA") AnnotationAssertion( "BTO:0000211") AnnotationAssertion( "CALOHA:TS-0121") AnnotationAssertion( "DHBA:10334") AnnotationAssertion( "DMBA:15855") AnnotationAssertion( "EFO:0000907") AnnotationAssertion( "EHDAA2:0004461") AnnotationAssertion( "EMAPA:18207") AnnotationAssertion( "EV:0100185") AnnotationAssertion( "FMA:61833") AnnotationAssertion( "GAID:670") AnnotationAssertion( "HBA:4278") AnnotationAssertion( "MA:0000894") AnnotationAssertion( "MAT:0000513") AnnotationAssertion( "MESH:A08.186.211.730.885.105.487.550.184") AnnotationAssertion( "NCIT:C12451") AnnotationAssertion( "OpenCyc:Mx4rvvyAjJwpEbGdrcN5Y29ycA") AnnotationAssertion( "PBA:10082") AnnotationAssertion(Annotation( "BIRNLEX:1373") "UMLS:C0007461") AnnotationAssertion(Annotation( "ncithesaurus:Caudate_Nucleus") "UMLS:C0007461") AnnotationAssertion(Annotation( "BIRNLEX:1373") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=226") AnnotationAssertion( "caudatus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BAMS:CA") "Ammon horn fields") AnnotationAssertion(Annotation( "BTO:0000211") "caudatum") AnnotationAssertion(Annotation( ) Annotation( ) "nucleus caudatus") AnnotationAssertion(Annotation( "BTO:0000211") "nucleus caudatus") AnnotationAssertion( "UBERON:0001873") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "caudate nucleus") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/9/91/Telencephalon-Horiconatal.jpg"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "MA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (putamen) AnnotationAssertion(Annotation( "BIRNLEX:809") "Subcortical nucleus of telencephalic , which together with the caudate nucleus, forms the striatum. The putamen lies lateral to the internal capsule and medial to the external medullary lamina, and is separated from the caudate nucleus by the fibers of the internal capsule for most of its length, except at its anterior portion.") AnnotationAssertion( "check - rodents. The caudate nucleus and putamen are separated by a clear white matter bundle in most species but not in rodents (MM)") AnnotationAssertion(Annotation( ) "Nucleus of brain which lies ventral to the caudate nucleus and internal capsule and medial to the external capsule. The putamen and caudate nucleus together form the dorsal striatum. It is also one of the structures that comprises the basal ganglia. Through various pathways, the putamen is connected to the substantia nigra and globus pallidus. The main function of the putamen is to regulate movements and influence various types of learning. It employs dopamine to perform its functions. The putamen also plays a role in degenerative neurological disorders, such as Parkinson's disease[Wikipedia:Putamen].") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001456") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "DOI:10.1016/j.cub.2011.05.001 Stephenson-Jones M, Samuelsson E, Ericsson J, Robertson B, Grillner S, Evolutionary conservation of the basal ganglia as a common vertebrate mechanism for action selection. Current Biology (2011)") "All nuclei of the mammalian basal ganglia are also present in the oldest vertebrates.[well established][VHOG]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:PU") AnnotationAssertion( "BAMS:Pu") AnnotationAssertion( "BIRNLEX:809") AnnotationAssertion( "BM:Tel-Pu") AnnotationAssertion( "CALOHA:TS-2041") AnnotationAssertion( "DHBA:10338") AnnotationAssertion( "DMBA:15857") AnnotationAssertion( "EMAPA:35719") AnnotationAssertion( "EV:0100187") AnnotationAssertion( "FMA:61834") AnnotationAssertion( "GAID:671") AnnotationAssertion( "HBA:4287") AnnotationAssertion( "MA:0000895") AnnotationAssertion( "MESH:A08.186.211.730.885.105.487.550.784") AnnotationAssertion( "NCIT:C12452") AnnotationAssertion( "PBA:10086") AnnotationAssertion(Annotation( "ncithesaurus:Putamen") "UMLS:C0034169") AnnotationAssertion( "VHOG:0001456") AnnotationAssertion(Annotation( "BIRNLEX:809") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=230") AnnotationAssertion( "nucleus putamen") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001874") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "putamen") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/3/33/BrainCaudatePutamen.svg"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (globus pallidus) AnnotationAssertion(Annotation( "BIRNLEX:1234") "Subcortical nucleus, functionally part of the basal ganglia, which consists of two segments the external (or lateral) and internal (or medial) separated by the medial medullary lamina in primates. In rodents, The globus pallidus lateral is separated from the medial segment by the fibers of the internal capsule/cerebral peduncle.") AnnotationAssertion(Annotation( "FMA:61835") "Nucleus of brain which is located medially to the putamen and laterally to the internal capsule[FMA][FMA:61835].") AnnotationAssertion( "pallidal") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:GP") AnnotationAssertion( "BIRNLEX:1234") AnnotationAssertion( "BTO:0002246") AnnotationAssertion( "CALOHA:TS-2013") AnnotationAssertion( "DHBA:10342") AnnotationAssertion( "EFO:0000905") AnnotationAssertion( "EMAPA:35380") AnnotationAssertion( "EV:0100188") AnnotationAssertion( "FMA:61835") AnnotationAssertion( "GAID:668") AnnotationAssertion( "HBA:4293") AnnotationAssertion( "MA:0000890") AnnotationAssertion( "MAT:0000510") AnnotationAssertion( "MESH:A08.186.211.730.885.105.487.397") AnnotationAssertion( "NCIT:C12449") AnnotationAssertion( "PBA:10097") AnnotationAssertion(Annotation( "BIRNLEX:1234") "UMLS:C0017651") AnnotationAssertion(Annotation( "ncithesaurus:Globus_Pallidus") "UMLS:C0017651") AnnotationAssertion(Annotation( "BIRNLEX:1234") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=231") AnnotationAssertion(Annotation( "BIRNLEX:1234") "pale body") AnnotationAssertion(Annotation( ) "paleostriatum") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:231") "globus pallidus (Burdach)") AnnotationAssertion(Annotation( "NeuroNames:231") Annotation( ) "nucleus pallidus") AnnotationAssertion(Annotation( ) "pallidium") AnnotationAssertion(Annotation( ) Annotation( "BIRNLEX:1234") Annotation( "GO:0021759") "pallidum") AnnotationAssertion( "UBERON:0001875") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "BTO and MA are inconsistent w.r.t striatum and pallidum being non-overlapping as in ABA. Note that we have pallidum as part_of basal gangion, so we can make the direct link to basal ganglion. ISBN:1588900649 says: ... a derivative of the diencephalon, seperates as a result of growing fibers of theinternal capsule and is finally displaced into telencephalon. only a small medial remnannt remains, the entopeduncular nucleus. The globus pallidus should be regarded as part of the subthalamus") AnnotationAssertion(rdfs:label "globus pallidus") AnnotationAssertion( "Brain:structure.gif"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "MA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "BTO-weakened") ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "GO"^^xsd:string) Annotation( "ISBN:1588900649") ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (amygdala) AnnotationAssertion(Annotation( "BIRNLEX:1241") "Subcortical brain region lying anterior to the hippocampal formation in the temporal lobe and anterior to the temporal horn of the lateral ventricle in some species. It is usually subdivided into several groups. Functionally, it is not considered a unitary structure (MM).") AnnotationAssertion(Annotation( "FMA:61841") "Subdivision of basal ganglion of telencephalon which is an almond-shaped gray mass in the dorsomedial part of the temporal lobe[FMA:61841]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001277") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0471090588 Hildebrand M, Analysis of vertebrate structure (1983) p.342") "One part of the striatum is called the archistriatum. (...) The archistriatum of fishes consists of several indistinctly segregated nuclei called the amygdaloid (...) complex. Tetrapods retain the structure, and in mammals the corresponding amygdala is a globular mass that tends to be ventral to the other basal nuclei.[well established][VHOG]") AnnotationAssertion( "amygdalar") AnnotationAssertion(Annotation( "MA"^^xsd:string) "MA and FMA differ on relationship to basal ganglion. The FMA text def suggests a subdivision, but it is classified as a subtype") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:AMY") AnnotationAssertion( "BAMS:Amg") AnnotationAssertion( "BAMS:Amy") AnnotationAssertion( "BAMS:Amygdala") AnnotationAssertion( "BAMS:Amygdaloid_complex") AnnotationAssertion( "BIRNLEX:1241") AnnotationAssertion( "BM:Tel-Am") AnnotationAssertion( "BTO:0001042") AnnotationAssertion( "CALOHA:TS-0037") AnnotationAssertion( "DHBA:10361") AnnotationAssertion( "EFO:0000252") AnnotationAssertion( "EMAPA:32672") AnnotationAssertion( "EMAPA:36051") AnnotationAssertion( "EV:0100189") AnnotationAssertion( "EV:0100190") AnnotationAssertion( "FMA:61841") AnnotationAssertion( "GAID:616") AnnotationAssertion( "HBA:4327") AnnotationAssertion( "MA:0000887") AnnotationAssertion( "MAT:0000289") AnnotationAssertion( "MESH:A08.186.211.577.090") AnnotationAssertion( "MIAA:0000289") AnnotationAssertion( "NCIT:C12440") AnnotationAssertion( "OpenCyc:Mx4rwJC_2ZwpEbGdrcN5Y29ycA") AnnotationAssertion( "PBA:4002") AnnotationAssertion(Annotation( "BIRNLEX:1241") "UMLS:C0002708") AnnotationAssertion(Annotation( "ncithesaurus:Amygdala") "UMLS:C0002708") AnnotationAssertion( "VHOG:0001277") AnnotationAssertion(Annotation( "BIRNLEX:1241") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=237") AnnotationAssertion( "amygdaloid body") AnnotationAssertion(Annotation( "BIRNLEX:1241") "amygdaloid complex") AnnotationAssertion( "amygdaloid nuclear complex") AnnotationAssertion( "amygdaloid nuclear groups") AnnotationAssertion( "archistriatum") AnnotationAssertion( "uberon") AnnotationAssertion( "amygdaloid area") AnnotationAssertion(Annotation( "BTO:0001042") "amygdaloid nuclear group") AnnotationAssertion(Annotation( "FMA:61841") "amygdaloid nucleus") AnnotationAssertion(Annotation( "NeuroNames:237") Annotation( ) "corpus amygdalae") AnnotationAssertion(Annotation( ) Annotation( ) "corpus amygdaloideum") AnnotationAssertion(Annotation( "BTO:0001042") "corpus amygdaloideum") AnnotationAssertion(Annotation( "BTO:0001042") "nucleus amygdalae") AnnotationAssertion( "UBERON:0001876") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "amygdala") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/8/8b/Amyg.png"^^xsd:anyURI) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "BTO"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (medial septal nucleus) AnnotationAssertion(Annotation( ) Annotation( "BIRNLEX:1668") "Cells lying generally in front of Regional_part_of_septal_nuclei, lying ventral to and slightly medial to the lateral septal nucleus. Neurons in this nucleus give rise to the bulk of efferents from the septal nuclei. A major projection from the medial septal nucleus terminates in the hippocampal formation (Adapted from Brodal, 1981).") AnnotationAssertion(Annotation( "BTO:0002446") "A nucleus in the septal area, coextensive with the diagonal band of Broca; it has afferent and cholinergic efferent connections with a variety of forebrain and brain stem areas including the hippocampus, the lateral hypothalamus, the tegmentum, and the amygdaloid bodies.") AnnotationAssertion(Annotation( ) "The medial septal nucleus is one of the septal nuclei. It plays a role in the generation of theta waves[Wikipedia:Medial_septal_nucleus].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:MS") AnnotationAssertion( "BAMS:SMN") AnnotationAssertion( "BIRNLEX:1668") AnnotationAssertion( "BM:Tel-Spt-SMN") AnnotationAssertion( "BTO:0002446") AnnotationAssertion( "DHBA:10351") AnnotationAssertion( "DMBA:15764") AnnotationAssertion( "EMAPA:35553") AnnotationAssertion( "FMA:61879") AnnotationAssertion( "HBA:4302") AnnotationAssertion( "MA:0000935") AnnotationAssertion( "MBA:564") AnnotationAssertion(Annotation( "BIRNLEX:1668") "UMLS:C0175233") AnnotationAssertion(Annotation( "BIRNLEX:1668") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=262") AnnotationAssertion(Annotation( "FMA:61879") "medial parolfactory nucleus") AnnotationAssertion(Annotation( "BIRNLEX:1668") "medial septum") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:262") "medial septal nucleus (Cajal)") AnnotationAssertion(Annotation( "NeuroNames:262") "medial septum nucleus") AnnotationAssertion(Annotation( "NeuroNames:262") Annotation( ) "n. septi medialis") AnnotationAssertion(Annotation( "NeuroNames:262") Annotation( ) "nucleus medialis septi") AnnotationAssertion(Annotation( "BTO:0002446") "nucleus septalis medialis") AnnotationAssertion( "UBERON:0001877") AnnotationAssertion(rdfs:label "medial septal nucleus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses(Annotation( "lexical"^^xsd:string) ) # Class: (septofimbrial nucleus) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:SF") AnnotationAssertion( "BAMS:SFN") AnnotationAssertion( "BAMS:SFi") AnnotationAssertion( "BIRNLEX:730") AnnotationAssertion( "BM:SFN") AnnotationAssertion( "DHBA:13032") AnnotationAssertion( "DMBA:15780") AnnotationAssertion( "EMAPA:35767") AnnotationAssertion( "FMA:61881") AnnotationAssertion( "MA:0000938") AnnotationAssertion( "MBA:310") AnnotationAssertion(Annotation( "BIRNLEX:730") "UMLS:C0694603") AnnotationAssertion(Annotation( "BIRNLEX:730") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=264") AnnotationAssertion(Annotation( "BIRNLEX:730") "nucleus septofibrialis") AnnotationAssertion( "scattered nucleus of the septum") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:264") Annotation( ) "nucleus septalis fimbrialis") AnnotationAssertion(Annotation( "NeuroNames:264") "nucleus septofimbrialis") AnnotationAssertion( "UBERON:0001878") AnnotationAssertion(rdfs:label "septofimbrial nucleus") SubClassOf( ) SubClassOf(Annotation( "NIFSTD"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (nucleus of diagonal band) AnnotationAssertion(Annotation( "ncithesaurus:Nucleus_of_Diagonal_Band") "A brain structure that is part of the septal nuclear complex. It is connected with the hippocampus, hypothalamus and amygdala.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:DB") AnnotationAssertion( "BAMS:NDB") AnnotationAssertion( "BIRNLEX:719") AnnotationAssertion( "DHBA:10354") AnnotationAssertion( "EHDAA2:0004708") AnnotationAssertion( "EMAPA:35598") AnnotationAssertion( "FMA:61882") AnnotationAssertion( "HBA:4309") AnnotationAssertion( "MA:0000936") AnnotationAssertion( "MBA:596") AnnotationAssertion( "NCIT:C97342") AnnotationAssertion(Annotation( "BIRNLEX:719") "UMLS:C0175227") AnnotationAssertion(Annotation( "ncithesaurus:Nucleus_of_Diagonal_Band") "UMLS:C0175227") AnnotationAssertion(Annotation( "BIRNLEX:719") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=265") AnnotationAssertion( "diagonal band nucleus") AnnotationAssertion( "nucleus of diagonal band (of Broca)") AnnotationAssertion( "nucleus of the diagonal band of Broca") AnnotationAssertion( "olfactory area (roberts)") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:265") Annotation( ) "area olfactoria (Roberts)") AnnotationAssertion(Annotation( "NeuroNames:265") "diagonal nucleus") AnnotationAssertion(Annotation( "NeuroNames:265") "nuclei of horizontal and vertical limbs of diagonal band") AnnotationAssertion(Annotation( "NeuroNames:265") Annotation( ) "nucleus fasciculi diagonalis Brocae") AnnotationAssertion(Annotation( "NeuroNames:265") "nucleus of the diagonal band") AnnotationAssertion( "UBERON:0001879") AnnotationAssertion(rdfs:label "nucleus of diagonal band") SubClassOf( ) SubClassOf(Annotation( "MA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (bed nucleus of stria terminalis) AnnotationAssertion(Annotation( ) Annotation( "INCF:Seattle_mtg_2010") "A brain structure in the forebrain wrapped around the stria terminalis. It's largest extent can be found around the crossing of the anterior commissure[INCF].") AnnotationAssertion(Annotation( "INCF:Seattle_mtg_2010") Annotation( ) "BST") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:BST") AnnotationAssertion( "BAMS:Bed.n.term.") AnnotationAssertion( "BAMS:ST") AnnotationAssertion( "BAMS:StT") AnnotationAssertion( "BAMS:bst") AnnotationAssertion( "BAMS:stb") AnnotationAssertion( "BIRNLEX:724") AnnotationAssertion( "BM:BNST") AnnotationAssertion( "BTO:0002698") AnnotationAssertion( "DHBA:10384") AnnotationAssertion( "EFO:0001971") AnnotationAssertion( "EMAPA:35169") AnnotationAssertion( "FMA:61884") AnnotationAssertion( "HBA:4313") AnnotationAssertion( "MA:0000925") AnnotationAssertion( "MBA:351") AnnotationAssertion(Annotation( "BIRNLEX:724") "UMLS:C0228365") AnnotationAssertion( "XAO:0004541") AnnotationAssertion(Annotation( "BIRNLEX:724") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=267") AnnotationAssertion(Annotation( "ABA:BST") Annotation( ) "bed nuclei of the stria terminalis") AnnotationAssertion(Annotation( "BIRNLEX:724") "bed nucleus of the stria terminalis") AnnotationAssertion(Annotation( "BIRNLEX:724") "bed nucleus stria terminalis (Johnson)") AnnotationAssertion(Annotation( "XAO:0004541") "bed nucleus striae terminalis") AnnotationAssertion( "intercalate nucleus of stria terminalis") AnnotationAssertion(Annotation( "BIRNLEX:724") "interstitial nucleus of stria terminalis") AnnotationAssertion( "nuclei of stria terminalis") AnnotationAssertion(Annotation( "FMA:61884") "nucleus of stria terminalis") AnnotationAssertion(Annotation( "FMA:61884") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "nucleus striae terminalis") AnnotationAssertion( "stria terminalis nucleus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BAMS:BST") "bed nuclei of the stria terminalis") AnnotationAssertion(Annotation( "NeuroNames:267") Annotation( ) "nucleus interstitialis striae terminalis") AnnotationAssertion(Annotation( "NeuroNames:267") "nucleus of the stria terminalis") AnnotationAssertion(Annotation( "BAMS:BST") "nucleus proprius stria terminalis (bed nucleus)") AnnotationAssertion( "UBERON:0001880") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "bed nucleus of stria terminalis") SubClassOf( ) SubClassOf(Annotation( "EMAPA"^^xsd:string) Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (island of Calleja) AnnotationAssertion(Annotation( ) Annotation( "MP:0010010") "One of the seven small groups of granule cells in the polymorph layer of the olfactory tubercle and one large group, the insula magna, which lies along the border between septum, nucleus accumbens and nucleus of the diagonal band.") AnnotationAssertion(Annotation( "MP:0010010") "The islands of Calleja are located within the olfactory tubercle in most species; however, in primates these islands are located within the nucleus accumbens, since the olfactory tubercle is absent or extremely rudimentary in the brains of primates") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:ICj") AnnotationAssertion( "BAMS:IClj") AnnotationAssertion( "BAMS:ISC") AnnotationAssertion( "BAMS:isl") AnnotationAssertion( "BIRNLEX:1113") AnnotationAssertion( "BM:Tel-ISC") AnnotationAssertion( "DHBA:10358") AnnotationAssertion( "EMAPA:35452") AnnotationAssertion( "FMA:61888") AnnotationAssertion( "GAID:632") AnnotationAssertion( "HBA:265504792") AnnotationAssertion( "MA:0000977") AnnotationAssertion( "MBA:481") AnnotationAssertion( "MESH:A08.186.211.577.699.400") AnnotationAssertion( "PBA:10095") AnnotationAssertion(Annotation( "BIRNLEX:1113") "UMLS:C0262264") AnnotationAssertion(Annotation( "BIRNLEX:1113") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=276") AnnotationAssertion( "Calleja island") AnnotationAssertion( "islands of Calleja") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "insula callejae") AnnotationAssertion(Annotation( ) Annotation( ) "insulae olfactoriae") AnnotationAssertion(Annotation( "NeuroNames:276") "islands of Calleja (olfactory tubercle)") AnnotationAssertion( "UBERON:0001881") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "island of Calleja") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/c/c0/Islands_of_Calleja_Rat.jpg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses(Annotation( "NIFSTD"^^xsd:string) ) # Class: (nucleus accumbens) AnnotationAssertion(Annotation( "BIRNLEX:727") "A region of the brain consisting of a collection of neurons located in the forebrain ventral to the caudate and putamen. (caudoputamen in rodent) and continuous with these structures. There is no distinct boundary between the nucleus accumbens and the caudate/putamen, but in rodents, it can be identified by its lack of traversing fiber bundles in comparison to the dorsal striatum. Its principle neuron is the medium spiny neuron. Together with the neostriatum (caudate nucleus and putamen), the nucleus accumbens forms the striatum.") AnnotationAssertion(Annotation( "ISBN:0471888893"^^xsd:string) ) AnnotationAssertion(Annotation( "GO:0021768") "a collection of pleomorphic cells in the caudal part of the anterior horn of the lateral ventricle, in the region of the olfactory tubercle, lying between the head of the caudate nucleus and the anterior perforated substance. It is part of the ventral striatum, a composite structure considered part of the basal ganglia[GO][GO:0021768].") AnnotationAssertion( "The ventral striatopallidal complex in birds corresponds closely to its counterpart in mammals, with a nucleus accumbes present in the rostral telenceaphalon. Note that in birds, a region previously called the nucleus accumbens is now recognized as the lateral part of the bed nucleus of stria terminalis.[ISBN:0471888893]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:ACB") AnnotationAssertion( "BAMS:ACC") AnnotationAssertion( "BAMS:Acb") AnnotationAssertion( "BIRNLEX:727") AnnotationAssertion( "BM:Ac") AnnotationAssertion( "BTO:0001862") AnnotationAssertion( "DHBA:10339") AnnotationAssertion( "EFO:0000906") AnnotationAssertion( "EHDAA2:0004707") AnnotationAssertion( "EMAPA:32789") AnnotationAssertion( "FMA:61889") AnnotationAssertion( "GAID:672") AnnotationAssertion( "HBA:4290") AnnotationAssertion( "MA:0000892") AnnotationAssertion( "MAT:0000512") AnnotationAssertion( "MBA:56") AnnotationAssertion( "MESH:A08.186.211.730.885.105.683") AnnotationAssertion( "NCIT:C52733") AnnotationAssertion( "PBA:10092") AnnotationAssertion(Annotation( "ncithesaurus:Accumbens_Nucleus") "UMLS:C0028633") AnnotationAssertion(Annotation( "BIRNLEX:727") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=277") AnnotationAssertion(Annotation( "FMA:61889") "accumbens nucleus") AnnotationAssertion(Annotation( "FMA:61889") "colliculus of caudate nucleus") AnnotationAssertion(Annotation( ) Annotation( "FMA:61889") "nucleus accumbens septi") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:277") Annotation( ) "colliculus nuclei caudati") AnnotationAssertion( "UBERON:0001882") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "nucleus accumbens") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/9/93/Circuit_du_syst%C3%A8me_de_recompense.jpg"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) Annotation( "GO"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "MA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses(Annotation( "NIFSTD"^^xsd:string) ) # Class: (olfactory tubercle) AnnotationAssertion(Annotation( "NLXANAT:1005037") "Region in the ventral telencephalon, prominent in rodents, but present in all mammals, consisting of a laminated cortical part and the cap/hilus region. It is traditionally viewed as part of the olfactory cortex but recognized by some as having a striatal character. According to many authors, the structure of the OT transitions from cortical like to striatal like along the lateral medial axis. (Maryann Martone).") AnnotationAssertion(Annotation( "check EHDAA2") Annotation( "MP"^^xsd:string) ) AnnotationAssertion(Annotation( ) "The olfactory tubercle is a structure involved in Olfaction. It is present in humans, but much smaller than it is in some other animals. It is a frequent subject of research.") AnnotationAssertion(Annotation( "MP"^^xsd:string) "Absent in primates") AnnotationAssertion( ) AnnotationAssertion( "BAMS:DLT") AnnotationAssertion( "BAMS:OLT") AnnotationAssertion( "BAMS:OT") AnnotationAssertion( "BAMS:Tu") AnnotationAssertion( "BM:Tel-OLT") AnnotationAssertion( "BTO:0001869") AnnotationAssertion( "DHBA:10310") AnnotationAssertion( "EHDAA2:0004701") AnnotationAssertion( "EMAPA:35616") AnnotationAssertion( "EV:0100177") AnnotationAssertion( "HBA:10145") AnnotationAssertion( "MA:0000976") AnnotationAssertion( "MBA:754") AnnotationAssertion( "NLXANAT:1005037") AnnotationAssertion( "PBA:10096") AnnotationAssertion( "VHOG:0001625") AnnotationAssertion(Annotation( ) "tuberculum olfactorium") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001883") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "olfactory tubercle") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/4/4d/Gray732.png"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "EHDAA2-inferred") Annotation( "MA"^^xsd:string) Annotation( "VHOG"^^xsd:string) Annotation( "Wikipedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (phrenic nerve) AnnotationAssertion(Annotation( "VHOG:0000728") "A nerve that arises from the caudal cervical nerves and is primarily the motor nerve of the diaphragm but also sends sensory fibers to the pericardium.") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000728") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( ) "A nerve that arises from the caudal cervical nerves and is primarily the motor nerve of the diaphragm but also sends sensory fibers to the pericardium. [TFD][VHOG]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:phn") AnnotationAssertion( "BTO:0001063") AnnotationAssertion( "EHDAA:4677") AnnotationAssertion( "EMAPA:17813") AnnotationAssertion( "FMA:6191") AnnotationAssertion( "GAID:848") AnnotationAssertion( "MA:0001170") AnnotationAssertion( "MESH:D010791") AnnotationAssertion( "NCIT:C52813") AnnotationAssertion( "OpenCyc:Mx4rvtmdUJwpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Phrenic_Nerve") "UMLS:C0031774") AnnotationAssertion( "VHOG:0000728") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0001063") "diaphragmatic nerve") AnnotationAssertion(Annotation( ) Annotation( ) "nervus phrenicus") AnnotationAssertion(Annotation( "BTO:0001063") "nervus phrenicus") AnnotationAssertion(Annotation( "BTO:0001063") "phrenic") AnnotationAssertion( "UBERON:0001884") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "phrenic nerve") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/3/3c/Gray806.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (dentate gyrus of hippocampal formation) AnnotationAssertion(Annotation( "BIRNLEX:1178") "Part of the hippocampal formation forming a 'V' or 'U' shaped structure with the opening bounded by hippocampal area CA3. It consists of 3 layers from superficial to deep: molecular, granule cell and polymorphic or hilar layer.") AnnotationAssertion(Annotation( "GO:0021542") "The dentate gyrus is one of two interlocking gyri of the hippocampus. It contains granule cells, which project to the pyramidal cells and interneurons of the CA3 region of the ammon gyrus[GO][GO:0021542].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:DG") AnnotationAssertion( "BIRNLEX:1178") AnnotationAssertion( "BM:Tel-DG") AnnotationAssertion( "BTO:0002496") AnnotationAssertion( "BTO:0002615") AnnotationAssertion( "CALOHA:TS-2388") AnnotationAssertion( "DHBA:10295") AnnotationAssertion( "DMBA:16115") AnnotationAssertion( "EFO:0001366") AnnotationAssertion( "EMAPA:19037") AnnotationAssertion( "FMA:61922") AnnotationAssertion( "GAID:624") AnnotationAssertion( "HBA:12891") AnnotationAssertion( "MA:0000190") AnnotationAssertion( "MBA:726") AnnotationAssertion( "MESH:A08.186.211.577.405.200") AnnotationAssertion( "NCIT:C32452") AnnotationAssertion(Annotation( "ncithesaurus:Dentate_Gyrus") "UMLS:C0152314") AnnotationAssertion( "area dentata") AnnotationAssertion(Annotation( "DHBA:10295") "dentate area (dentate gyrus)") AnnotationAssertion( "dentate gyrus") AnnotationAssertion( "fascia dentata") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "DHBA:10295") "dentate area") AnnotationAssertion(Annotation( ) Annotation( ) "gyrus dentatus") AnnotationAssertion(Annotation( "BTO:0002496") "gyrus dentatus") AnnotationAssertion(Annotation( "BTO:0002496") "hippocampal dentate gyrus") AnnotationAssertion( "UBERON:0001885") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "BTO says dentate gyrus = fascia dentata + hilus. Note that GO classifies dentate gyrus development under hippocampus development") AnnotationAssertion(rdfs:label "dentate gyrus of hippocampal formation") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/a/ab/HippocampalRegions.jpg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "MA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (choroid plexus) AnnotationAssertion(Annotation( ) Annotation( "ISBN:0471888893"^^xsd:string) "A network formed by blood vessels and the tela choroidea which secretes CSF into the ventricular spaces.") AnnotationAssertion( "TODO - check relationship to ventricle. Check subclass - ZFA says vasculature. Note that FMA:61934 (choroid plexus of cerebral hemisphere) has exact synonym 'choroid plexus' but it is not clear that this belongs here, as the fourth ventricle is not in the cerebral hemisphere") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0001443") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "A tuft of capillaries that project into the ventricles of the brain and secretes cerebral spinal fluid. The choroid plexus is covered by a cuboidal epithelium which maintains the integrity of the blood-brain barrier.[TAO]") AnnotationAssertion(Annotation( "MP:0000820") "Fringe of the tela choroidea of the brain ventricles[MP]") AnnotationAssertion( "choroidal") AnnotationAssertion(Annotation( ) Annotation( ) "CP") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:CHP") AnnotationAssertion( "BAMS:GHP") AnnotationAssertion( "BAMS:chp") AnnotationAssertion( "BAMS:chpl") AnnotationAssertion( "BTO:0000258") AnnotationAssertion( "CALOHA:TS-0145") AnnotationAssertion( "EFO:0001915") AnnotationAssertion( "EMAPA:32741") AnnotationAssertion( "FMA:61934") AnnotationAssertion( "GAID:607") AnnotationAssertion( "MA:0000823") AnnotationAssertion( "MBA:108") AnnotationAssertion( "MESH:D002831") AnnotationAssertion( "NCIT:C12694") AnnotationAssertion( "TAO:0001443") AnnotationAssertion(Annotation( "ncithesaurus:Choroid_Plexus") "UMLS:C0008524") AnnotationAssertion( "VHOG:0001377") AnnotationAssertion( "ZFA:0001443") AnnotationAssertion(Annotation( "FMA:61934") "chorioid plexus") AnnotationAssertion(Annotation( "FMA:61934") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "plexus choroideus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:61934") "choroid plexus of cerebral hemisphere") AnnotationAssertion(Annotation( ) Annotation( ) "plexus choroideus") AnnotationAssertion( "ventricular choroid plexus") AnnotationAssertion( "UBERON:0001886") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "choroid plexus") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/b/b9/Gray708.svg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses( ) DisjointClasses( ) # Class: (internal capsule of telencephalon) AnnotationAssertion(Annotation( "BIRNLEX:1659") "White matter regional part of brain which is flanked by nuclear masses, consisting of both afferent and efferent fibers projecting between the cerebral cortex and the brainstem and spinal cord. It consists of three distinct parts: an anterior limb, posterior limb, and genu. (Adapted from MSH by Maryann Martone).") AnnotationAssertion(Annotation( "MA:0002748") "internal capsule") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:ic") AnnotationAssertion( "BAMS:int") AnnotationAssertion( "BIRNLEX:1659") AnnotationAssertion( "BM:IC") AnnotationAssertion( "DHBA:10581") AnnotationAssertion( "DMBA:17770") AnnotationAssertion( "EMAPA:18206") AnnotationAssertion( "EMAPA:35437") AnnotationAssertion( "FMA:61950") AnnotationAssertion( "GAID:685") AnnotationAssertion( "HBA:9263") AnnotationAssertion( "MA:0002748") AnnotationAssertion( "MBA:6") AnnotationAssertion( "MESH:D020772") AnnotationAssertion( "NCIT:C13082") AnnotationAssertion( "PBA:10102") AnnotationAssertion(Annotation( "BIRNLEX:1659") "UMLS:C0152341") AnnotationAssertion(Annotation( "ncithesaurus:Internal_Capsule") "UMLS:C0152341") AnnotationAssertion(Annotation( "MP:0008128") "brain internal capsule") AnnotationAssertion( "internal capsule radiations") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "capsula interna") AnnotationAssertion( "UBERON:0001887") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "internal capsule of telencephalon") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/9/91/Telencephalon-Horiconatal.jpg"^^xsd:anyURI) SubClassOf( ) # Class: (lateral olfactory stria) AnnotationAssertion(Annotation( "BIRNLEX:1559") "White matter tract that contains projections from the olfactory bulb to the olfactory cortex (Maryann Martone).") AnnotationAssertion(Annotation( ) "In mammals the fibers of the dorsal lateral olfactory tract either pass under the accessory olfactory formation, or they penetrate through it separating the internal granule cells from the output cells.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:LDTR") AnnotationAssertion( "BAMS:LOTR") AnnotationAssertion( "BAMS:lo") AnnotationAssertion( "BAMS:lot") AnnotationAssertion( "BIRNLEX:1559") AnnotationAssertion( "BM:Tel-LOT") AnnotationAssertion( "DHBA:12075") AnnotationAssertion( "DMBA:17773") AnnotationAssertion( "EV:0100175") AnnotationAssertion( "FMA:61971") AnnotationAssertion( "HBA:265505514") AnnotationAssertion( "MBA:665") AnnotationAssertion(Annotation( "BIRNLEX:1559") "UMLS:C0152330") AnnotationAssertion(Annotation( "BIRNLEX:1559") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=284") AnnotationAssertion(Annotation( "ZFA:0000229") Annotation( ) "tractus olfactorius lateralis") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "LOT") AnnotationAssertion(Annotation( "FMA:61971") "lateral olfactory stria") AnnotationAssertion(Annotation( "NeuroNames:284") "lateral olfactory stria") AnnotationAssertion(Annotation( "NeuroNames:284") "lateral olfactory tract") AnnotationAssertion(Annotation( "NeuroNames:284") "lateral olfactory tract, body") AnnotationAssertion(Annotation( "BAMS:lot") "lateral olfactory tract. body") AnnotationAssertion(Annotation( "NeuroNames:284") "olfactory tract") AnnotationAssertion(Annotation( ) Annotation( ) "stria olfactoria lateralis") AnnotationAssertion(Annotation( "NeuroNames:284") Annotation( ) "stria olfactoria lateralis") AnnotationAssertion(Annotation( "NeuroNames:284") Annotation( ) "tractus olfactorius lateralis") AnnotationAssertion( "UBERON:0001888") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "lateral olfactory stria") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/4/4d/Gray732.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) DisjointClasses(Annotation( "lexical"^^xsd:string) ) # Class: (trunk of phrenic nerve) AnnotationAssertion( "EHDAA2:0001463") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37718") AnnotationAssertion( "FMA:6198") AnnotationAssertion( "MA:0001177") AnnotationAssertion( "phrenic nerve trunk") AnnotationAssertion( "phrenic neural trunk") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001889") AnnotationAssertion(rdfs:label "trunk of phrenic nerve") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (forebrain) AnnotationAssertion(Annotation( ) Annotation( "ZFIN:ZDB-PUB-961014-576"^^xsd:string) "The most anterior region of the brain including both the telencephalon and diencephalon.") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0010147") Annotation( "AAO"^^xsd:string) Annotation( "AAO:BJB"^^xsd:string) "Most anterior of the three regions of the brain consisting of the telencephalon and diencephalon.[AAO]") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0000109") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "The most anterior region the brain including both the telencephalon and diencephalon. Kimmel et al, 1995.[TAO]") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0000109") Annotation( "TAO"^^xsd:string) "relationship loss: develops_from forebrain neural tube (TAO:0007041)[TAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000383") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "PMID:8787764 Holland ND, Panganiban G, Henyey EL, Holland LZ, Sequence and developmental expression of AmphiDll, an amphioxus Distal-less gene transcribed in the ectoderm, epidermis and nervous system: insights into evolution of craniate forebrain and neural crest. Development (1996)") "In craniate embryos, neural expression of Distal-less-related genes is exclusively in the forebrain (...). Because the major neural expression domain of amphioxus AmphiDll is in the anterior three-fourths of the cerebral vesicle, we suggest that this region of the neural tube is homologous to parts of the craniate forebrain. This conclusion is strongly supported by three-dimensional, computer-assisted reconstruction of the neural tube of amphioxus based on serial transmission electron microscopy. At the neuroanatomical level, a number of detailed homologies are indicated between the anterior three-fourths of the amphioxus cerebral vesicle and the diencephalic region of the craniate forebrain. If one assumes that the amphioxus condition fairly represents the nervous system of the proximate ancestor of the craniates, one can suggest that they evolved from a creature that had the beginnings of a forebrain.[well established][VHOG]") AnnotationAssertion( "prosencephalic") AnnotationAssertion(Annotation( "BIRNLEX:1509") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "FB") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010147") AnnotationAssertion( "BAMS:FB") AnnotationAssertion( "BAMS:Forebrain") AnnotationAssertion( "BIRNLEX:1509") AnnotationAssertion( "BTO:0000478") AnnotationAssertion( "CALOHA:TS-0380") AnnotationAssertion( "DHBA:10156") AnnotationAssertion( "DMBA:15566") AnnotationAssertion( "EFO:0000909") AnnotationAssertion( "EHDAA2:0000556") AnnotationAssertion( "EHDAA:3470") AnnotationAssertion( "EMAPA:16895") AnnotationAssertion( "FMA:61992") AnnotationAssertion( "MA:0000170") AnnotationAssertion( "MAT:0000105") AnnotationAssertion( "MESH:D016548") AnnotationAssertion( "MIAA:0000105") AnnotationAssertion( "NCIT:C40185") AnnotationAssertion( "TAO:0000109") AnnotationAssertion(Annotation( "BIRNLEX:1509") "UMLS:C0085140") AnnotationAssertion(Annotation( "ncithesaurus:Fore-Brain") "UMLS:C0085140") AnnotationAssertion( "VHOG:0000383") AnnotationAssertion( "XAO:0000011") AnnotationAssertion( "ZFA:0000109") AnnotationAssertion(Annotation( "BIRNLEX:1509") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=27") AnnotationAssertion( "uberon") AnnotationAssertion( "prosencephalon") AnnotationAssertion( "UBERON:0001890") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "forebrain") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/5/54/EmbryonicBrain.svg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "definitional"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (midbrain) AnnotationAssertion(Annotation( "GO:0030901") "The midbrain is the middle division of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes a ventral part containing the cerebral peduncles and a dorsal tectum containing the corpora quadrigemina and that surrounds the aqueduct of Sylvius connecting the third and fourth ventricles)[GO].") AnnotationAssertion( "developmental relationships need revised") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0010149") Annotation( "AAO"^^xsd:string) Annotation( "AAO:BJB"^^xsd:string) "Middle part of the brain composed of the optic tectum and penducular region.[AAO]") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0000128") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "The brain region between the forebrain anteriorly and the hindbrain posteriorly, including the tectum dorsally and the midbrain tegmentum ventrally. Kimmel et al, 1995.[TAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000069") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "DOI:10.1016/S0959-4388(99)00003-3 Holland LZ and Holland ND, Chordate origins of the vertebrate central nervous system. Current Opinion in Neurobiology (1999)") "Fine structural, computerized three-dimensional (3D) mapping of cell connectivity in the amphioxus nervous system and comparative molecular genetic studies of amphioxus and tunicates have provided recent insights into the phylogenetic origin of the vertebrate nervous system. The results suggest that several of the genetic mechanisms for establishing and patterning the vertebrate nervous system already operated in the ancestral chordate and that the nerve cord of the proximate invertebrate ancestor of the vertebrates included a diencephalon, midbrain, hindbrain, and spinal cord.[well established][VHOG]") AnnotationAssertion( "mesencephalic") AnnotationAssertion(Annotation( "ABA") "part of brainstem in ABA - we reject this in favor of ISBN:0471888893 which has an implicit overlaps relationships") AnnotationAssertion(Annotation( "BIRNLEX:1667") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "MB") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010149") AnnotationAssertion( "BAMS:MES") AnnotationAssertion( "BIRNLEX:1667") AnnotationAssertion( "BM:MB") AnnotationAssertion( "BTO:0000138") AnnotationAssertion( "CALOHA:TS-0630") AnnotationAssertion( "DHBA:10648") AnnotationAssertion( "DMBA:16649") AnnotationAssertion( "EFO:0000919") AnnotationAssertion( "EHDAA2:0001162") AnnotationAssertion( "EHDAA:3694") AnnotationAssertion( "EMAPA:16974") AnnotationAssertion( "EV:0100242") AnnotationAssertion( "FMA:61993") AnnotationAssertion( "HBA:9001") AnnotationAssertion( "MA:0000207") AnnotationAssertion( "MAT:0000106") AnnotationAssertion( "MBA:313") AnnotationAssertion( "MESH:D008636") AnnotationAssertion( "MIAA:0000106") AnnotationAssertion( "NCIT:C12510") AnnotationAssertion( "OpenCyc:Mx4rvsBUqpwpEbGdrcN5Y29ycA") AnnotationAssertion( "RETIRED_EHDAA2:0001104") AnnotationAssertion( "TAO:0000128") AnnotationAssertion(Annotation( "BIRNLEX:1667") "UMLS:C0025462") AnnotationAssertion(Annotation( "ncithesaurus:Mesencephalon") "UMLS:C0025462") AnnotationAssertion( "VHOG:0000069") AnnotationAssertion( "XAO:0000014") AnnotationAssertion( "ZFA:0000128") AnnotationAssertion(Annotation( "BIRNLEX:1667") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=462") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "mesencephalon") AnnotationAssertion( "UBERON:0001891") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "midbrain") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/f/f9/Human_brain_inferior_view_description.JPG"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "definitional"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "Bgee:AN"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (rhombomere) AnnotationAssertion(Annotation( ) Annotation( "ZFIN:curator"^^xsd:string) "A segment of the developing hindbrain[ZFA]. In the vertebrate embryo, a rhombomere is a transiently divided segment of the developing neural tube, within the hindbrain region (a neuromere) in the area that will eventually become the rhombencephalon. The rhombomeres appear as a series of slightly constricted swellings in the neural tube, caudal to the cephalic flexure.[WP].") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0001064") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "A segment of the developing hindbrain. Kimmel et al, 1995.[TAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000672") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "DOI:10.1006/dbio.2002.0831 Mazet F, Shimeld SM, The Evolution of Chordate Neural Segmentation. Developmental Biology (2002)") "Rhombomeric segmentation is found in all living vertebrates and is of fundamental importance to the development of the vertebrate head.[well established][VHOG]") AnnotationAssertion( "In human embryonic development, the rhombomeres are present by day 29") AnnotationAssertion( "DHBA divides this into A(1-3),B(4),C(5-7) and D(8)") AnnotationAssertion(Annotation( "ZFA:0001064") "hindbrain segment") AnnotationAssertion(Annotation( "ZFA:0001064") "segment of hindbrain") AnnotationAssertion( ) AnnotationAssertion( "DHBA:12664") AnnotationAssertion( "EFO:0003617") AnnotationAssertion( "EMAPA:16148") AnnotationAssertion( "FMA:295666") AnnotationAssertion( "MAT:0000272") AnnotationAssertion( "MIAA:0000272") AnnotationAssertion( "RETIRED_EHDAA2:0000669") AnnotationAssertion( "TAO:0001064") AnnotationAssertion( "VHOG:0000672") AnnotationAssertion( "XAO:0004079") AnnotationAssertion( "ZFA:0001064") AnnotationAssertion( "hindbrain neuromere") AnnotationAssertion(Annotation( "DHBA:HNM") Annotation( ) "hindbrain neuromeres") AnnotationAssertion( "rhombomere") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "MIAA:0000272") "future rhombencephalon") AnnotationAssertion(Annotation( "VHOG:0000672") Annotation( ) "rhombomeres") AnnotationAssertion( "UBERON:0001892") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "rhombomere") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (telencephalon) AnnotationAssertion(Annotation( "AAO:0010479") Annotation( "XAO:0000012") "Part of the forebrain consisting of paired olfactory bulbs and cerebral hemispheres.") AnnotationAssertion(Annotation( "FMA:62000") "Organ component of neuraxis that has as its parts the cerebral cortex, cerebral white matter, basal ganglia, septum and fornix, as well as subcortical gray and white matter structures[FMA:62000].") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0010479") Annotation( "AAO"^^xsd:string) Annotation( "AAO:BJB"^^xsd:string) "Part of the forebrain consisting of paired olfactory bulbs and cerebral hemispheres.[AAO]") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0000079") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "The anterior and dorsal forebrain neuromere, includes the olfactory bulb. Kimmel et al, 1995.[TAO]") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0000079") Annotation( "TAO"^^xsd:string) "relationship loss: develops_from presumptive telencephalon (TAO:0000571)[TAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000283") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "DOI:10.1016/j.ydbio.2005.02.008 Murakami Y, Uchida K, Rijli FM and Kuratani S, Evolution of the brain developmental plan: Insights from agnathans. Developmental Biology (2005)") "From an evolutionary standpoint, the telencephalon is the most recent brain structure: the amphioxus does not have this structure as a morphological entity. Overt telencephalon is present in the hagfish and lamprey to receive numerous input fibers from various parts of the CNS, similar to gnathostomes.[well established][VHOG]") AnnotationAssertion( "cerebral") AnnotationAssertion( "telencephalic") AnnotationAssertion( "telenencephalic") AnnotationAssertion(Annotation( ) "In mammals the cortex covers almost the whole of the cerebral hemispheres.") AnnotationAssertion( "In ray-finned fishes and most pronounced in teleosts the roof plate of the embryonic telencephalon extends laterally with the effect that the paired alar plates forming the hemispheric walls roll out lateroventrally in a process called eversion. This is unlike the development in other vertebrate groups. [ZFA:0000079, ISBN:3764351209]") AnnotationAssertion(Annotation( ) "In ray-finned fishes the inner surfaces of the lateral and ventral regions of the cerebrum bulge up into the ventricles.") AnnotationAssertion(Annotation( ) "In the amniotes, the cerebrum becomes increasingly large and complex. In reptiles, the paleopallium is much larger than in amphibians, and its growth has pushed the basal nuclei into the central regions of the cerebrum.") AnnotationAssertion(Annotation( ) "In the most primitive living vertebrates, the hagfishes and lampreys, the cerebrum is a relatively simple structure receiving nerve impulses from the olfactory bulb.") AnnotationAssertion(Annotation( ) "The cerebrum of birds has evolved along different lines to that of mammals, although they are similarly enlarged, by comparison with reptiles. However, this enlargement is largely due to the basal ganglia, with the other areas remaining relatively primitive in structure.") AnnotationAssertion(Annotation( ) "dolphins are the only species (other than humans) to have cerebra accounting for as much as 2 percent of their body weight.") AnnotationAssertion(Annotation( ) "supratentorial region") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010479") AnnotationAssertion( "BAMS:CB") AnnotationAssertion( "BAMS:CH") AnnotationAssertion( "BAMS:IV") AnnotationAssertion( "BAMS:Tel") AnnotationAssertion( "BIRNLEX:1115") AnnotationAssertion( "BM:Tel") AnnotationAssertion( "BTO:0000239") AnnotationAssertion( "CALOHA:TS-1018") AnnotationAssertion( "DHBA:10158") AnnotationAssertion( "EFO:0000912") AnnotationAssertion( "EHDAA2:0001982") AnnotationAssertion( "EMAPA:16910") AnnotationAssertion( "EV:0100165") AnnotationAssertion( "FMA:62000") AnnotationAssertion( "GAID:621") AnnotationAssertion( "HBA:4007") AnnotationAssertion( "MA:0000183") AnnotationAssertion( "MAT:0000421") AnnotationAssertion( "MBA:567") AnnotationAssertion( "MESH:D013687") AnnotationAssertion( "MIAA:0000421") AnnotationAssertion( "PBA:128011350") AnnotationAssertion( "TAO:0000079") AnnotationAssertion(Annotation( "BIRNLEX:1115") "UMLS:C0039452") AnnotationAssertion( "VHOG:0000283") AnnotationAssertion( "XAO:0000012") AnnotationAssertion( "ZFA:0000079") AnnotationAssertion(Annotation( "BIRNLEX:1115") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=31") AnnotationAssertion(Annotation( ) Annotation( ) Annotation( "BTO:0000239") Annotation( "EMAPA:16910") Annotation( "FMA:62000") "cerebrum") AnnotationAssertion(Annotation( ) Annotation( "Swanson:2004") "endbrain") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001893") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "telencephalon") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "Bgee:AN"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (diencephalon) AnnotationAssertion(Annotation( ) "The division of the forebrain that develops from the foremost primary cerebral vesicle.") AnnotationAssertion(Annotation( "not well differentiated from the cerebrum. (Ariens, p. 868)") Annotation( ) ) AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0000101") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "The more posterior and ventral of two forebrain neuromeres, the other being the telencephalon; major derivatives are the eye cups, the brain pretectal region, the thalamus, hypothalamus, and epithalamus (including the habenula and epiphysis). Kimmel et al, 1995.[TAO]") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0010481") Annotation( "AAO"^^xsd:string) Annotation( "AAO:BJB"^^xsd:string) "Unpaired part of the forebrain comprised of three major parts; the epithalamus, thalamus, and hypothalamus.[AAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000318") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "DOI:10.1016/S0959-4388(99)00003-3 Holland LZ and Holland ND, Chordate origins of the vertebrate central nervous system. Current Opinion in Neurobiology (1999)") "Fine structural, computerized three-dimensional (3D) mapping of cell connectivity in the amphioxus nervous system and comparative molecular genetic studies of amphioxus and tunicates have provided recent insights into the phylogenetic origin of the vertebrate nervous system. The results suggest that several of the genetic mechanisms for establishing and patterning the vertebrate nervous system already operated in the ancestral chordate and that the nerve cord of the proximate invertebrate ancestor of the vertebrates included a diencephalon, midbrain, hindbrain, and spinal cord.[well established][VHOG]") AnnotationAssertion( "diencephalic") AnnotationAssertion(Annotation( "ABA") "in ABA, this is part of the brain stem") AnnotationAssertion(Annotation( "BIRNLEX:1503") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "DiE") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010481") AnnotationAssertion( "BAMS:DI") AnnotationAssertion( "BAMS:Di") AnnotationAssertion( "BAMS:DiE") AnnotationAssertion( "BAMS:IB") AnnotationAssertion( "BAMS:Zh.") AnnotationAssertion( "BIRNLEX:1503") AnnotationAssertion( "BM:Die") AnnotationAssertion( "BTO:0000342") AnnotationAssertion( "CALOHA:TS-0199") AnnotationAssertion( "DHBA:10389") AnnotationAssertion( "DMBA:16308") AnnotationAssertion( "EFO:0000911") AnnotationAssertion( "EHDAA2:0000385") AnnotationAssertion( "EHDAA:1969") AnnotationAssertion( "EHDAA:2645") AnnotationAssertion( "EHDAA:3472") AnnotationAssertion( "EMAPA:16896") AnnotationAssertion( "EV:0100194") AnnotationAssertion( "FMA:62001") AnnotationAssertion( "GAID:618") AnnotationAssertion( "HBA:4391") AnnotationAssertion( "MA:0000171") AnnotationAssertion( "MAT:0000420") AnnotationAssertion( "MBA:1129") AnnotationAssertion( "MESH:A08.186.211.730.385") AnnotationAssertion( "MIAA:0000420") AnnotationAssertion( "NCIT:C12456") AnnotationAssertion( "OpenCyc:Mx4rwC-V0JwpEbGdrcN5Y29ycA") AnnotationAssertion( "PBA:128013010") AnnotationAssertion( "TAO:0000101") AnnotationAssertion(Annotation( "BIRNLEX:1503") "UMLS:C0012144") AnnotationAssertion(Annotation( "ncithesaurus:Diencephalon") "UMLS:C0012144") AnnotationAssertion( "VHOG:0000318") AnnotationAssertion( "XAO:0000013") AnnotationAssertion( "ZFA:0000101") AnnotationAssertion(Annotation( "BIRNLEX:1503") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=288") AnnotationAssertion( "between brain") AnnotationAssertion(Annotation( "Swanson:2004") "interbrain") AnnotationAssertion(Annotation( "FMA:62001") "mature diencephalon") AnnotationAssertion(Annotation( "MGI:anna"^^xsd:string) "thalamencephalon") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0000342") "betweenbrain") AnnotationAssertion(Annotation( ) Annotation( ) "diencephalon") AnnotationAssertion( "UBERON:0001894") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "diencephalon") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/5/54/EmbryonicBrain.svg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "definitional"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "definitional"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (metencephalon) AnnotationAssertion(Annotation( ) Annotation( ) "Rostral segment of the hindbrain that has as its parts the pons (where present) and the cerebellum[WP,modified].") AnnotationAssertion( ) AnnotationAssertion(Annotation( "BIRNLEX:965") "Anterior part of the hindbrain ventral to the cerebellum[BIRNLEX:965].") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000741") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( ) "The anterior of two brain vesicles formed by specialization of the rhombencephalon in the developing embryo. It gives rise to cerebellum and pons. [TFD][VHOG]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000741") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0878932504 Gilbert SF, Developmental Biology (2006) p.381-382, ISBN:978-0030223693 Liem KF, Bemis WE, Walker WF, Grande L, Functional Anatomy of the Vertebrates: An Evolutionary Perspective (2001) p.500") "The early development of most vertebrate brains is similar (...). The zebrafish neural tube follows the same basic differentiation pattern as the mammalian neural tube (reference 1); The brain develops from three embryonic enlargements of the neural tube, which later differentiate into five regions. A forebrain differentiates into telencephalon and diencephalon. The midbrain, or mesencephalon, remains undivided. The hindbrain divides into the metencephalon and myelencephalon. Cavities within the brain enlarge to form a series of interconnected ventricles (reference 2).[well established][VHOG]") AnnotationAssertion( ) AnnotationAssertion(Annotation( "ncithesaurus:Epencephalon") Annotation( ) "epencephalon") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:Met") AnnotationAssertion( "BIRNLEX:965") AnnotationAssertion( "BTO:0000673") AnnotationAssertion( "CALOHA:TS-2029") AnnotationAssertion( "DHBA:10655") AnnotationAssertion( "EHDAA2:0001149") AnnotationAssertion( "EHDAA:5498") AnnotationAssertion( "EMAPA:17071") AnnotationAssertion( "FMA:62003") AnnotationAssertion( "GAID:594") AnnotationAssertion( "HBA:4833") AnnotationAssertion( "MA:0000197") AnnotationAssertion( "MESH:D020540") AnnotationAssertion( "NCIT:C32741") AnnotationAssertion(Annotation( "BIRNLEX:965") "UMLS:C0376353") AnnotationAssertion(Annotation( "ncithesaurus:Epencephalon") "UMLS:C1516904") AnnotationAssertion( "VHOG:0000741") AnnotationAssertion(Annotation( "BIRNLEX:965") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=543") AnnotationAssertion(Annotation( "FMA:62003") "epencephalon-2") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001895") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "the terms metencephalon and myelencephalon are only meaningful in mammals and birds[Neuroanatomy of the Zebrafish Brain]. In zebrafish, with the exception of the cerebellum, the ventral remainder of the metencephalon can be separated only arbitrarily from the more caudal myelencephalic portion of the medulla oblongata and thus these are not distinguished in ZFA[ZFA].") AnnotationAssertion(rdfs:label "metencephalon") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/5/54/EmbryonicBrain.svg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "definitional"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (medulla oblongata) AnnotationAssertion(Annotation( ) Annotation( "FMA:62004") Annotation( "GO:0021550") "Organ component of neuraxis that has as its parts the medullary reticular formation, inferior olivary complex and cochlear nuclear complex, among other structures[FMA]. The medulla oblongata lies directly above the spinal cord and controls vital autonomic functions such as digestion, breathing and the control of heart rate[GO].") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0010486") Annotation( "AAO"^^xsd:string) Annotation( "AAO:BJB"^^xsd:string) "Posterior portion of the hindbrain which controls respiration, heartbeat, digestion, and swallowing as well as some locomotor responses.[AAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000181") Annotation( "VHOG"^^xsd:string) Annotation( ) "The posterior region of the brain that is continuous with the spinal cord. [Bemis_WE, Functional_Anatomy_of_the_Vertebrates:_An_Evolutionary_Perspective, Glossary_G-17, Grande_L, Liem_KF, Third_Edition_(2001)_Orlando_Fla.:_Harcourt_College_Publishers, Walker_WF][VHOG]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000181") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "DOI:10.1016/j.ydbio.2008.08.017 Marin F, Aroca P, Puelles L, Hox gene colinear expression in the avian medulla oblongata is correlated with pseudorhombomeric domains. Developmental Biology (2008)") "Classical anatomical studies subdivided the vertebrate rhombencephalon into pons and medulla oblongata. (...) The medulla oblongata appears therefore as a tagma, that is, a group of segmental units (pseudorhombomeres, in this case) sharing some morphological and molecular characteristics, and in some aspects different from the segmental units present in adjoining brain regions, pons and spinal cord.[well established][VHOG]") AnnotationAssertion( "bulb") AnnotationAssertion(Annotation( "ABA:MY") "medulla") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010486") AnnotationAssertion( "BAMS:MY") AnnotationAssertion( "BAMS:Md") AnnotationAssertion( "BIRNLEX:957") AnnotationAssertion( "BM:Me") AnnotationAssertion( "BTO:0000041") AnnotationAssertion( "CALOHA:TS-0607") AnnotationAssertion( "DMBA:17352") AnnotationAssertion( "EFO:0000924") AnnotationAssertion( "EHDAA2:0001088") AnnotationAssertion( "EHDAA:7588") AnnotationAssertion( "EMAPA:17550") AnnotationAssertion( "EV:0100275") AnnotationAssertion( "FMA:62004") AnnotationAssertion( "GAID:590") AnnotationAssertion( "MA:0000206") AnnotationAssertion( "MAT:0000111") AnnotationAssertion( "MAT:0000367") AnnotationAssertion( "MBA:354") AnnotationAssertion( "MESH:D008526") AnnotationAssertion( "MIAA:0000111") AnnotationAssertion( "NCIT:C12442") AnnotationAssertion( "OpenCyc:Mx4rvVjxSJwpEbGdrcN5Y29ycA") AnnotationAssertion( "OpenCyc:Mx4rwCqnXJwpEbGdrcN5Y29ycA") AnnotationAssertion( "TAO:0000545") AnnotationAssertion(Annotation( "BIRNLEX:957") "UMLS:C0025148") AnnotationAssertion(Annotation( "ncithesaurus:Medulla_Oblongata") "UMLS:C0025148") AnnotationAssertion(Annotation( "BIRNLEX:957") "UMLS:C1269575") AnnotationAssertion( "VHOG:0000181") AnnotationAssertion( "XAO:0003100") AnnotationAssertion( "ZFA:0000545") AnnotationAssertion(Annotation( "BIRNLEX:957") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=698") AnnotationAssertion(Annotation( "FMA:62004") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "bulbus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "medulla oblonzata") AnnotationAssertion(Annotation( "FMA:62004") "metepencephalon") AnnotationAssertion( "UBERON:0001896") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "medulla oblongata") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/6/6b/Illu_pituitary_pineal_glands.jpg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (dorsal plus ventral thalamus) AnnotationAssertion(Annotation( "BIRNLEX:954") "Subcortical brain region consisting of paired gray matter bodies in the dorsal diencephalon and forming part of the lateral wall of the third ventricle of the brain. The thalamus represents the major portion of the diencephalon and is commonly divided into cellular aggregates known as nuclear groups.(MeSH). The dorsal topographic division of the interbrain. The macrodissected adult human thalamus was clearly illustrated by Vesalius in 1543 and the term as defined here was introduced by His in 1893. It includes the traditional epithalamus, dorsal thalamus, and ventral thalamus of Herrick (1910, pp. 494, 498). Also see Kuhlenbeck (1927, Ch. 9) and Jones (1985, p. 87).") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000657") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( ) "One of a pair of large oval nervous structures made of gray matter and forming most of the lateral walls of the third ventricle of the brain and part of the diencephalon. [TFD][VHOG]") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0010483") Annotation( "AAO"^^xsd:string) Annotation( "AAO:BJB"^^xsd:string) "Part of the diencephalon consisting of a mass of connecting fibers which relay sensory information to the cerebral cortex.[AAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000657") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0030223693 Liem KF, Bemis WE, Walker WF, Grande L, Functional Anatomy of the Vertebrates: An Evolutionary Perspective (2001) p.484") "(...) the brain regions of tetrapods, the structures they contain, and their basic organizational features are the same as in fishes.[well established][VHOG]") AnnotationAssertion( "thalamic") AnnotationAssertion(Annotation( ) Annotation( "BIRNLEX:954") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "Th") AnnotationAssertion(Annotation( "FMA:62007") Annotation( "MA:0000179") "thalamus") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010483") AnnotationAssertion( "BAMS:TH") AnnotationAssertion( "BAMS:Th") AnnotationAssertion( "BIRNLEX:954") AnnotationAssertion( "BTO:0001365") AnnotationAssertion( "CALOHA:TS-1031") AnnotationAssertion( "DHBA:10390") AnnotationAssertion( "DMBA:16376") AnnotationAssertion( "EFO:0000910") AnnotationAssertion( "EMAPA:17540") AnnotationAssertion( "EV:0100195") AnnotationAssertion( "GAID:656") AnnotationAssertion( "HBA:4392") AnnotationAssertion( "MA:0000179") AnnotationAssertion( "MAT:0000109") AnnotationAssertion( "MBA:549") AnnotationAssertion( "MESH:A08.186.211.730.385.826") AnnotationAssertion( "MIAA:0000109") AnnotationAssertion( "NCIT:C12459") AnnotationAssertion( "OpenCyc:Mx4rwMPQ65wpEbGdrcN5Y29ycA") AnnotationAssertion( "PBA:128013014") AnnotationAssertion( "TAO:0001215") AnnotationAssertion(Annotation( "BIRNLEX:954") "UMLS:C0039729") AnnotationAssertion(Annotation( "ncithesaurus:Thalamus") "UMLS:C0039729") AnnotationAssertion( "VHOG:0000657") AnnotationAssertion( "ZFA:0001215") AnnotationAssertion( "galen:Thalamus") AnnotationAssertion(Annotation( "BIRNLEX:954") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=300") AnnotationAssertion(Annotation( "PMCID:PMC3345571") "wider thalamus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:300") Annotation( ) "thalamencephalon") AnnotationAssertion(Annotation( "VHOG:0000657") Annotation( ) "thalami") AnnotationAssertion(Annotation( "NeuroNames:300") Annotation( ) "thalamus opticus") AnnotationAssertion( "UBERON:0001897") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "dorsal plus ventral thalamus") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/c/ce/Brain_chrischan_thalamus.jpg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA-abduced-lr"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (hypothalamus) AnnotationAssertion(Annotation( ) Annotation( "ZFIN:curator"^^xsd:string) "A specialized brain region of the ventral diencephalon arising near the end of the segmentation period; the embryonic hypothalamic region will give rise to the posterior pituitary gland as well as a number of brain nuclei. [ZFA]. One of the most important functions of the hypothalamus is to link the nervous system to the endocrine system via the pituitary gland (hypophysis).[Wikipedia].") AnnotationAssertion(Annotation( "Lancelets possess a region similar to the hypothalamus (Murakami, 2005)") ) AnnotationAssertion(Annotation( "Ariens, p. 1192") ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0000032") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "A specialized brain region of the ventral diencephalon arising near the end of the segmentation period; the embryonic hypothalamic region will give rise to the posterior pituitary gland as well as a number of brain nuclei. Kimmel et al, 1995.[TAO]") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0010484") Annotation( "AAO"^^xsd:string) Annotation( "AAO:BJB"^^xsd:string) "Part of the diencephalon ventral to the thalamus consisting of connecting fibers and is a center for control of the autonomous nervous system.[AAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000179") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "DOI:10.1016/j.ydbio.2005.02.008 Murakami Y, Uchida K, Rijli FM and Kuratani S, Evolution of the brain developmental plan: Insights from agnathans. Developmental Biology (2005)") "For instance, the vertebrate ventral diencephalon generates the hypothalamus which functions as a major endocrine center in cooperation with the hypophysis, the anterior part of the pituitary gland, located just ventral to the hypothalamus. In the amphioxus brain, the presence of a hypothalamus-like structure has been reported associated with the ventrally located Hatschek's pit, the hypothetical hypophysial homologue. It is thus conceivable that a hypothalamus-like structure originally involved in endocrine functions may have already been present before the establishment of vertebrates.[well established][VHOG]") AnnotationAssertion( "hypothalamic") AnnotationAssertion(Annotation( "WP"^^xsd:string) "all vertebrates contain a hypothalamus") AnnotationAssertion(Annotation( "BIRNLEX:734") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "Hy") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010484") AnnotationAssertion( "BAMS:HY") AnnotationAssertion( "BAMS:Hy") AnnotationAssertion( "BIRNLEX:734") AnnotationAssertion( "BM:Die-Hy") AnnotationAssertion( "BTO:0000614") AnnotationAssertion( "CALOHA:TS-0469") AnnotationAssertion( "DHBA:10467") AnnotationAssertion( "EFO:0000107") AnnotationAssertion( "EHDAA2:0000802") AnnotationAssertion( "EHDAA:5446") AnnotationAssertion( "EMAPA:17536") AnnotationAssertion( "EV:0100225") AnnotationAssertion( "FMA:62008") AnnotationAssertion( "GAID:460") AnnotationAssertion( "HBA:4540") AnnotationAssertion( "MA:0000173") AnnotationAssertion( "MAT:0000112") AnnotationAssertion( "MBA:1097") AnnotationAssertion( "MESH:A08.186.211.577.482") AnnotationAssertion( "MIAA:0000112") AnnotationAssertion( "NCIT:C12458") AnnotationAssertion( "OpenCyc:Mx4rwEgr9JwpEbGdrcN5Y29ycA") AnnotationAssertion( "TAO:0000032") AnnotationAssertion(Annotation( "BIRNLEX:734") "UMLS:C0020663") AnnotationAssertion(Annotation( "ncithesaurus:Hypothalamus") "UMLS:C0020663") AnnotationAssertion( "VHOG:0000179") AnnotationAssertion( "XAO:0004070") AnnotationAssertion( "ZFA:0000032") AnnotationAssertion( "galen:Hypothalamus") AnnotationAssertion(Annotation( "BIRNLEX:734") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=292") AnnotationAssertion( "preoptico-hypothalamic area") AnnotationAssertion( "preoptico-hypothalamic region") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "hypothalamus") AnnotationAssertion( "UBERON:0001898") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "hypothalamus") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/9/9f/LocationOfHypothalamus.jpg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA") Annotation( "EHDAA2"^^xsd:string) Annotation( "Wikipedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (epithalamus) AnnotationAssertion(Annotation( "BIRNLEX:1710") "Most dorsal part of the thalamus, comprising the pineal gland and habenular nuclei in most vertebrates. In a few vertebrates, it also includes the parietal eye. (Butler and Hodos, Comparative Vertebrate Neuroanatomy, 2nd ed, 2005, pg. 345-346.") AnnotationAssertion( ) AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0010482") Annotation( "AAO"^^xsd:string) Annotation( "AAO:BJB"^^xsd:string) "Dorsal segment of the diencephalon containing the habenular ganglia, a choroid plexus, and the pineal organ.[AAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000178") Annotation( "VHOG"^^xsd:string) Annotation( ) "The roof of the diencephalon lying above the thalamus. [Bemis_WE, Functional_Anatomy_of_the_Vertebrates:_An_Evolutionary_Perspective, Glossary_G-11, Grande_L, Liem_KF, Third_Edition_(2001)_Orlando_Fla.:_Harcourt_College_Publishers, Walker_WF][VHOG]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000178") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "DOI:10.1046/j.1469-7580.2001.19910063.x Concha ML and Wilson SW, Asymmetry in the epithalamus of vertebrates. J Anat (2001)") "The epithalamus has been historically conceived as a distinct neuroanatomical moiety within the diencephalon of all vertebrates. (...) The evolutionary origins of epithalamic structures are uncertain but asymmetry in this region is likely to have existed at the origin of the vertebrate, perhaps even the chordate, lineage.[well established][VHOG]") AnnotationAssertion( "epithalamic") AnnotationAssertion(Annotation( "BIRNLEX:1710") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "ETh") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010482") AnnotationAssertion( "BAMS:EPI") AnnotationAssertion( "BAMS:ETh") AnnotationAssertion( "BAMS:EpT") AnnotationAssertion( "BAMS:Epi") AnnotationAssertion( "BIRNLEX:1710") AnnotationAssertion( "BM:Die-Epi") AnnotationAssertion( "BTO:0000175") AnnotationAssertion( "CALOHA:TS-2060") AnnotationAssertion( "DHBA:10451") AnnotationAssertion( "EFO:0000918") AnnotationAssertion( "EHDAA2:0000448") AnnotationAssertion( "EHDAA:5433") AnnotationAssertion( "EMAPA:17532") AnnotationAssertion( "EV:0100220") AnnotationAssertion( "FMA:62009") AnnotationAssertion( "GAID:455") AnnotationAssertion( "HBA:4520") AnnotationAssertion( "MA:0000172") AnnotationAssertion( "MAT:0000422") AnnotationAssertion( "MBA:958") AnnotationAssertion( "MESH:A08.186.211.577.200") AnnotationAssertion( "MIAA:0000422") AnnotationAssertion( "NCIT:C12457") AnnotationAssertion( "OpenCyc:Mx4rvneLQpwpEbGdrcN5Y29ycA") AnnotationAssertion( "PBA:128013147") AnnotationAssertion( "TAO:0000509") AnnotationAssertion(Annotation( "BIRNLEX:1710") "UMLS:C0152361") AnnotationAssertion(Annotation( "ncithesaurus:Epithalamus") "UMLS:C0152361") AnnotationAssertion( "VHOG:0000178") AnnotationAssertion( "ZFA:0000509") AnnotationAssertion(Annotation( "BIRNLEX:1710") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=292") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "epithalamus") AnnotationAssertion( "UBERON:0001899") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "epithalamus") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/c/cb/Epithalamus.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (ventral thalamus) AnnotationAssertion(Annotation( "GO:0021539") "Anterior part of the diencephalon that lies between the dorsal thalamus, hypothalamus, and tegmentum of the mesencephalon, including subthalamic nucleus, zona incerta, the fields of Forel, and the nucleus of ansa lenticularis[GO, modified].") AnnotationAssertion(Annotation( "Ariens, p. 1192") ) AnnotationAssertion( ) AnnotationAssertion( "subthalamic") AnnotationAssertion(Annotation( "BIRNLEX:708") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "SbTh") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:SbTh") AnnotationAssertion( "BAMS:VNT") AnnotationAssertion( "BAMS:VT") AnnotationAssertion( "BAMS:Ventral_thalamus") AnnotationAssertion( "BIRNLEX:708") AnnotationAssertion( "BM:Die-VTh") AnnotationAssertion( "CALOHA:TS-2048") AnnotationAssertion( "DHBA:10461") AnnotationAssertion( "DMBA:16310") AnnotationAssertion( "EHDAA2:0004470") AnnotationAssertion( "EMAPA:35915") AnnotationAssertion( "EV:0100223") AnnotationAssertion( "FMA:62010") AnnotationAssertion( "GAID:653") AnnotationAssertion( "HBA:4504") AnnotationAssertion( "MA:0000181") AnnotationAssertion( "MESH:A08.186.211.730.385.800") AnnotationAssertion( "NCIT:C52731") AnnotationAssertion( "TAO:0000458") AnnotationAssertion(Annotation( "BIRNLEX:708") "UMLS:C0152349") AnnotationAssertion(Annotation( "ncithesaurus:Ventral_Thalamus") "UMLS:C0152349") AnnotationAssertion( "ZFA:0000458") AnnotationAssertion(Annotation( "BIRNLEX:708") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=434") AnnotationAssertion(Annotation( "BIRNLEX:708") Annotation( "FMA:62010") "subthalamic region") AnnotationAssertion(Annotation( ) Annotation( "BIRNLEX:708") "subthalamus") AnnotationAssertion(Annotation( "BIRNLEX:708") Annotation( ) "thalamus ventralis") AnnotationAssertion(Annotation( "GO:0021539") "ventral thalamus") AnnotationAssertion(Annotation( "MA:0000181") "ventral thalamus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "perithalamus") AnnotationAssertion(Annotation( ) Annotation( ) "prethalamus") AnnotationAssertion( "UBERON:0001900") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "Some sources treat the subthalamus as distinct from the thalamus, separated by the zona limitans intrathalamica. In MA, the ventral thalamus is part of the thalamus. Butler Hodos who identify a dorsal to ventral sequence consisting of epithalamus, dorsal thalamus, ventral thalamus and hypothalamus. We solve this by considering dorsal and ventral thalamus distinct, and the label thalamus as being ambiguous w.r.t thalamus proper (dorsal thalamus) or wider thalamus (dorsal plus ventral)") AnnotationAssertion(rdfs:label "ventral thalamus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (epithelium of trachea) AnnotationAssertion(Annotation( "ISBN:0-397-51047-0") Annotation( "MGI:cwg"^^xsd:string) Annotation( "MP:0002285") "The epithelial lining of the trachea which contains numerous ciliated cells.") AnnotationAssertion( "UBERON:0003227") AnnotationAssertion( ) AnnotationAssertion( "BTO:0001389") AnnotationAssertion( "CALOHA:TS-1061") AnnotationAssertion( "EHDAA2:0002069") AnnotationAssertion( "EHDAA:5007") AnnotationAssertion( "EMAPA:16855") AnnotationAssertion( "EMAPA:18409") AnnotationAssertion( "FMA:62015") AnnotationAssertion( "MA:0001862") AnnotationAssertion( "NCIT:C33797") AnnotationAssertion(Annotation( "ncithesaurus:Tracheal_Epithelium") "UMLS:C1179002") AnnotationAssertion( "VHOG:0001045") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelial tissue of trachea") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelial tissue of windpipe") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelium of windpipe") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "trachea epithelial tissue") AnnotationAssertion( "trachea epithelium") AnnotationAssertion( "tracheal epithelium") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "windpipe epithelial tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "windpipe epithelium") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001901") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "epithelium of trachea") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (epithelium of small intestine) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An epithelium that is part of a small intestine [Automatically generated definition].") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0005127") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "Intestinal epithelium which lines the lumen of the mid intestine.[TAO]") AnnotationAssertion( ) AnnotationAssertion( "BTO:0001258") AnnotationAssertion( "CALOHA:TS-2104") AnnotationAssertion( "EMAPA:35778") AnnotationAssertion( "FMA:62017") AnnotationAssertion( "MA:0001553") AnnotationAssertion( "TAO:0005127") AnnotationAssertion( "ZFA:0005127") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelial tissue of small bowel") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelial tissue of small intestine") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelium of small bowel") AnnotationAssertion(Annotation( "ZFA:0005127") "mid intestine epithelium") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "small bowel epithelial tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "small bowel epithelium") AnnotationAssertion( "small intestinal epithelium") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "small intestine epithelial tissue") AnnotationAssertion( "small intestine epithelium") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001902") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "epithelium of small intestine") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (thalamic reticular nucleus) AnnotationAssertion(Annotation( ) "The thalamic reticular nucleus is part of the ventral thalamus that forms a capsule around the thalamus laterally. It is separated from the thalamus by the external medullary lamina. Reticular cells are GABAergic, and have discoid dendritic arbors in the plane of the nucleus. Thalamic Reticular Nucleus is variously abbreviated TRN, RTN, NRT, and RT. [WP,unvetted].") AnnotationAssertion(Annotation( "MA"^^xsd:string) "only MA considers this part of a subthalamus; MA also considers a subthalamus part of a thalamus") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:RT") AnnotationAssertion( "BAMS:Rt") AnnotationAssertion( "BIRNLEX:1721") AnnotationAssertion( "BM:Die-VTh-R") AnnotationAssertion( "DHBA:10464") AnnotationAssertion( "EMAPA:35737") AnnotationAssertion( "EV:0100214") AnnotationAssertion( "FMA:62026") AnnotationAssertion( "HBA:4506") AnnotationAssertion( "MA:0000876") AnnotationAssertion( "MBA:262") AnnotationAssertion(Annotation( "BIRNLEX:1721") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=365") AnnotationAssertion(Annotation( "FMA:62026") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "nucleus reticularis thalami") AnnotationAssertion( "reticular nuclear group") AnnotationAssertion( "reticular nucleus of thalamus") AnnotationAssertion( "reticular nucleus of the thalamus") AnnotationAssertion( "reticular nucleus-2") AnnotationAssertion( "reticular thalamic nucleus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:365") Annotation( ) "nuclei reticulares (thalami)") AnnotationAssertion(Annotation( "NeuroNames:365") Annotation( ) "nucleus reticularis") AnnotationAssertion(Annotation( ) Annotation( ) "nucleus reticularis thalami") AnnotationAssertion(Annotation( "NeuroNames:365") Annotation( ) "nucleus reticulatus (thalami)") AnnotationAssertion(Annotation( "NeuroNames:365") Annotation( ) "nucleus thalamicus reticularis") AnnotationAssertion(Annotation( "NeuroNames:365") "reticular nucleus thalamus (Arnold)") AnnotationAssertion(Annotation( "NeuroNames:365") Annotation( ) "reticulatum thalami (Hassler)") AnnotationAssertion( "UBERON:0001903") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "thalamic reticular nucleus") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/a/ab/Constudthal.gif"^^xsd:anyURI) SubClassOf( ) # Class: (habenula) AnnotationAssertion(Annotation( ) Annotation( "FMA:62032") "A segment of the epithalamus that has as its parts the habenular nuclei and the habenular commissure[FMA,modified].") AnnotationAssertion(Annotation( "Butler, 1996, p. 303") ) AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0000213") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "The habenula relays impulses from limbic areas of the telencephalon to an unpaired midbrain nucleus, the interpeduncular nucleus.[TAO]") AnnotationAssertion( "habenular") AnnotationAssertion(Annotation( "BIRNLEX:1611") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "Hb") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:HB") AnnotationAssertion( "BAMS:Hb") AnnotationAssertion( "BIRNLEX:1611") AnnotationAssertion( "BTO:0003684") AnnotationAssertion( "EMAPA:35386") AnnotationAssertion( "EV:0100222") AnnotationAssertion( "FMA:62032") AnnotationAssertion( "GAID:619") AnnotationAssertion( "HBA:4522") AnnotationAssertion( "MA:0000830") AnnotationAssertion( "MESH:A08.186.211.577.200.360") AnnotationAssertion( "TAO:0000213") AnnotationAssertion(Annotation( "BIRNLEX:1611") "UMLS:C0152362") AnnotationAssertion( "ZFA:0000213") AnnotationAssertion(Annotation( "BIRNLEX:1611") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=294") AnnotationAssertion(Annotation( "FMA:62032") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "habenula complex") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:294") Annotation( ) "ganglion intercrurale") AnnotationAssertion(Annotation( "NeuroNames:294") Annotation( ) "ganglion interpedunculare") AnnotationAssertion( "habenulae") AnnotationAssertion( "habenular complex") AnnotationAssertion( "habenular nuclei") AnnotationAssertion(Annotation( "NeuroNames:294") Annotation( ) "nuclei habenulares") AnnotationAssertion(Annotation( "NeuroNames:294") Annotation( ) "nucleus habenularis") AnnotationAssertion(Annotation( "BTO:0003684") "pineal peduncle") AnnotationAssertion( "UBERON:0001904") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "habenula") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/d/d7/Gray715.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pineal body) AnnotationAssertion(Annotation( "BIRNLEX:1184") "A midline, cone like structure located in the dorso-caudal roof of the 3rd ventricle, attached by peduncles to the habenular and posterior commissures. The stalk contains nerve fibers, blood vessels, connective tissue and parenchymal cells (Paxinos, The Rat Central Nervous System, 2nd ed, pg 399).") AnnotationAssertion(Annotation( "Hardisty, p. 310") ) AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0000019") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "A circumscribed swelling, includes the pineal primordium that appears late in the segmentation period in the dorsal midline of the diencephalon. Kimmel et al, 1995.[TAO]") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0010549") Annotation( "AAO"^^xsd:string) Annotation( "AAO:BJB"^^xsd:string) "Anatomical structure which is a medial outgrowth of the thalamus on the dorsal surface of the brain. This structure is light sensitive and secretes melatonin when exposed to prolonged darkness.[AAO]") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0000019") Annotation( "TAO"^^xsd:string) "relationship loss: part_of pineal complex (TAO:0001359)[TAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000051") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0030223693 Liem KF, Bemis WE, Walker WF, Grande L, Functional Anatomy of the Vertebrates: An Evolutionary Perspective (2001) p.516") "The pineal gland has evolved from a part of the epiphyseal complex of anamniotes, which includes a median light-receptive pineal eye, parietal eye, or both.[well established][VHOG]") AnnotationAssertion( "epiphyseal") AnnotationAssertion( "epiphysial") AnnotationAssertion( "lobulated in humans, homogeneous in mouse. Calcifies with age in humans.") AnnotationAssertion(Annotation( "BIRNLEX:1184") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "Pi") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010549") AnnotationAssertion( "BAMS:PIN") AnnotationAssertion( "BAMS:Pi") AnnotationAssertion( "BIRNLEX:1184") AnnotationAssertion( "BM:P") AnnotationAssertion( "BTO:0001067") AnnotationAssertion( "CALOHA:TS-0789") AnnotationAssertion( "DHBA:10460") AnnotationAssertion( "EFO:0000865") AnnotationAssertion( "EHDAA2:0001466") AnnotationAssertion( "EHDAA:7523") AnnotationAssertion( "EMAPA:18778") AnnotationAssertion( "EV:0100131") AnnotationAssertion( "EV:0100221") AnnotationAssertion( "FMA:62033") AnnotationAssertion( "GAID:453") AnnotationAssertion( "HBA:4532") AnnotationAssertion( "MA:0000175") AnnotationAssertion( "MAT:0000448") AnnotationAssertion( "MBA:953") AnnotationAssertion( "MESH:D010870") AnnotationAssertion( "NCIT:C12398") AnnotationAssertion( "NLXANAT:1010009") AnnotationAssertion( "OpenCyc:Mx4rv2FMGpwpEbGdrcN5Y29ycA") AnnotationAssertion( "TAO:0000019") AnnotationAssertion(Annotation( "BIRNLEX:1184") "UMLS:C0031939") AnnotationAssertion(Annotation( "ncithesaurus:Pineal_Gland") "UMLS:C0031939") AnnotationAssertion( "VHOG:0000051") AnnotationAssertion( "XAO:0000160") AnnotationAssertion( "ZFA:0000019") AnnotationAssertion( "galen:PinealGland") AnnotationAssertion(Annotation( "BIRNLEX:1184") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=297") AnnotationAssertion( "corpus pineale") AnnotationAssertion(Annotation( "FMA:62033") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "glandula pinealis") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) Annotation( ) "glandula pinealis") AnnotationAssertion(Annotation( "FMA:62033") "pineal gland") AnnotationAssertion(Annotation( "ZFA:0000019") "pineal organ") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BIRNLEX:1184") "conarium") AnnotationAssertion(Annotation( "ZFA:0000019") Annotation( ) "epiphysis") AnnotationAssertion(Annotation( ) "epiphysis cerebri") AnnotationAssertion(Annotation( "VHOG:0000051") "frontal organ") AnnotationAssertion(Annotation( "VHOG:0000051") "pineal") AnnotationAssertion(Annotation( "NeuroNames:297") "pineal gland (Galen)") AnnotationAssertion(Annotation( "VHOG:0000051") "stirnorgan") AnnotationAssertion( "UBERON:0001905") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "pineal body") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/6/6b/Illu_pituitary_pineal_glands.jpg"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "MA"^^xsd:string) ) SubClassOf(Annotation( "ZFA"^^xsd:string) Annotation( "various") ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (subthalamic nucleus) AnnotationAssertion(Annotation( "GO:0021763") "The subthalamic nucleus is the lens-shaped nucleus located in the ventral part of the subthalamus on the inner aspect of the internal capsule that is concerned with the integration of somatic motor function[GO].") AnnotationAssertion(Annotation( "NLXANAT:1010002") "Lens shaped nucleus lying in the subthalamu[NLXANAT:1010002]s") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:STN") AnnotationAssertion( "BAMS:STh") AnnotationAssertion( "BAMS:SUB") AnnotationAssertion( "BM:Die-Sb") AnnotationAssertion( "BTO:0002252") AnnotationAssertion( "CALOHA:TS-1154") AnnotationAssertion( "DHBA:10466") AnnotationAssertion( "EFO:0001392") AnnotationAssertion( "EMAPA:35839") AnnotationAssertion( "EV:0100224") AnnotationAssertion( "FMA:62035") AnnotationAssertion( "GAID:655") AnnotationAssertion( "HBA:4518") AnnotationAssertion( "MA:0000877") AnnotationAssertion( "MBA:470") AnnotationAssertion( "MESH:A08.186.211.730.385.800.800") AnnotationAssertion( "NCIT:C12454") AnnotationAssertion( "NLXANAT:1010002") AnnotationAssertion(Annotation( "ncithesaurus:Subthalamic_Nucleus") "UMLS:C0152355") AnnotationAssertion( "Luys' nucleus") AnnotationAssertion( "body of Forel") AnnotationAssertion( "body of Luys") AnnotationAssertion(Annotation( ) "nucleus of Luys") AnnotationAssertion( "nucleus of corpus luysii") AnnotationAssertion(Annotation( ) Annotation( "BTO:0002252") Annotation( ) "nucleus subthalamicus") AnnotationAssertion( "subthalamic nucleus (of Luys)") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "Luy's body") AnnotationAssertion(Annotation( "BTO:0002252") "Luys' body") AnnotationAssertion(Annotation( ) "corpus Luysi") AnnotationAssertion(Annotation( ) Annotation( ) "corpus subthalamicum") AnnotationAssertion(Annotation( ) "subthalamic nucleus of Luys") AnnotationAssertion( "UBERON:0001906") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "subthalamic nucleus") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/3/33/Basal-ganglia-coronal-sections-large.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "part of hypothalamus in ABA") ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (zona incerta) AnnotationAssertion(Annotation( ) "The zona incerta is a horizontally elongated region of gray matter cells in the subthalamus below the thalamus. Its connections project extensively over the brain from the cerebral cortex down into the spinal cord. Its function is unknown though several have been proposed related to 'limbic-motor integration' such as controlling visceral activity and pain; gating sensory input and synchronizing cortical and subcortical brain rhythms. Its dysfunction may play a role in central pain syndrome. It is also been identified as a promising deep brain stimulation therapy target for treating Parkinsons Disease. Its existence was first described by Auguste Forel in 1877 as a 'region of which nothing certain can be said'. A hundred and thirty years later in 2007, Nadia Urbain and Martin Deschênes of Université Laval noted that the 'zona incerta is among the least studied regions of the brain; its name does not even appear in the index of many textbooks. ' [WP,unvetted].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:ZI") AnnotationAssertion( "BM:Die-VTh-ZI") AnnotationAssertion( "BTO:0003146") AnnotationAssertion( "DHBA:10463") AnnotationAssertion( "EMAPA:35930") AnnotationAssertion( "FMA:62038") AnnotationAssertion( "HBA:4507") AnnotationAssertion( "MA:0000878") AnnotationAssertion( "MBA:797") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BAMS:ZI") "nucleus of the zona incerta") AnnotationAssertion(Annotation( "BAMS:ZI") "zona incerta proper") AnnotationAssertion( "UBERON:0001907") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "zona incerta") SubClassOf( ) # Class: (optic tract) AnnotationAssertion(Annotation( ) Annotation( "NIFSTD") Annotation( "ZFIN:curator"^^xsd:string) "Diencephalic white matter (tract) which is comprised of retinal ganglion cell axons after which they have passed through the optic chiasm[ZFA]. Predominantly white matter structure found in diencephalon consisting of fibers originating in the retina. The optic tract is considered to extend from the point of the optic chiasm and terminates largely, although not exclusively, in the lateral geniculate complex. Other fibers end in the superior colliculus and other structures in the diencephalon, midbrain and brainstem (MM)[NIF].") AnnotationAssertion( "relationships need checking by expert. NIF and ZFA both state part of diencepahalon; MA says part of optic nerve II. in uberon, CNS and PNS are spatially disjoint, and axon tracts are part of the CNS so we make the relationship to CNII 'continuous_with'") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:opt") AnnotationAssertion( "BIRNLEX:1684") AnnotationAssertion( "BM:Tel-OT") AnnotationAssertion( "DHBA:10589") AnnotationAssertion( "DMBA:17785") AnnotationAssertion( "EMAPA:16678") AnnotationAssertion( "EMAPA:35617") AnnotationAssertion( "FMA:62046") AnnotationAssertion( "GAID:735") AnnotationAssertion( "HBA:9309") AnnotationAssertion( "MA:0001099") AnnotationAssertion( "MBA:125") AnnotationAssertion( "MESH:D014795") AnnotationAssertion( "NCIT:C33218") AnnotationAssertion( "TAO:0000252") AnnotationAssertion(Annotation( "BIRNLEX:1684") "UMLS:C0152405") AnnotationAssertion(Annotation( "ncithesaurus:Optic_Tract") "UMLS:C0152405") AnnotationAssertion( "VHOG:0001164") AnnotationAssertion( "XAO:0004101") AnnotationAssertion( "ZFA:0000252") AnnotationAssertion(Annotation( "BIRNLEX:1684") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=460") AnnotationAssertion( "optic lemniscus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "ZFA:0000252") Annotation( ) "optic tracts") AnnotationAssertion(Annotation( "NeuroNames:460") Annotation( ) "tractus optici") AnnotationAssertion(Annotation( ) Annotation( ) "tractus opticus") AnnotationAssertion(Annotation( "GAID:735") "visual pathway") AnnotationAssertion( "UBERON:0001908") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "optic tract") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/f/f6/Gray773.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (habenular commissure) AnnotationAssertion(Annotation( ) Annotation( ) "A brain commissure that is situated in front of the pineal gland and connects the habenular nucleus on one side of the diencephalon with that on the other side.") AnnotationAssertion(Annotation( "BIRNLEX:1609") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "HBC") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:HC") AnnotationAssertion( "BAMS:HG") AnnotationAssertion( "BAMS:hbc") AnnotationAssertion( "BIRNLEX:1609") AnnotationAssertion( "BM:Die-Epi-HC") AnnotationAssertion( "DHBA:10566") AnnotationAssertion( "DMBA:17768") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37875") AnnotationAssertion( "FMA:62048") AnnotationAssertion( "HBA:9227") AnnotationAssertion( "MBA:611") AnnotationAssertion( "TAO:0000359") AnnotationAssertion(Annotation( "BIRNLEX:1609") "UMLS:C0152363") AnnotationAssertion( "ZFA:0000359") AnnotationAssertion(Annotation( "BIRNLEX:1609") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=299") AnnotationAssertion(Annotation( ) Annotation( ) "commissura habenularum") AnnotationAssertion(Annotation( "ZFA:0000359") "commissura habenularum") AnnotationAssertion(Annotation( "MP:0008231") "commissure habenularum") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:299") Annotation( ) "commissura habenularis") AnnotationAssertion(Annotation( "NeuroNames:299") "habenular commissure (Haller)") AnnotationAssertion(Annotation( "BAMS:hbc") "habenular commisure") AnnotationAssertion( "UBERON:0001909") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "habenular commissure") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/d/d7/Gray715.png"^^xsd:anyURI) SubClassOf(Annotation( "MP"^^xsd:string) ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "ZFA-modified"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (medial forebrain bundle) AnnotationAssertion(Annotation( ) "The Medial forebrain bundle (MFB), is a complex bundle of axons coming from the basal olfactory regions, the periamygdaloid region, and the septal nuclei, and passing to the lateral hypothalamus, with some carrying on into the tegmentum. It contains both ascending and descending fibers. It also represents a part of the mesolimbic pathway, carrying information between the ventral tegmentum and the nucleus accumbens. It is commonly accepted that the MFB is a part of the reward system, involved in the integration of reward and pleasure. Electrical stimulation of the medial forebrain bundle is believed to cause sensations of pleasure. This hypothesis is based upon intracranial self-stimulation (ICSS) studies. Animals will work for MFB ICSS, and humans report that MFB ICSS is intensely pleasurable. This is most likely because the medial forebrain bundle carries information from the ventral tegmental area (VTA) to the nucleus accumbens (nAcc or Acb). The nAcc is a recognized reward center, and activation of the pathway from the VTA to the nAcc is believed to be rewarding, which is why it is sometimes referred to as the hedonic highway. [WP,unvetted].") AnnotationAssertion(Annotation( "NCIT") "a pathway in NCIT") AnnotationAssertion(Annotation( "BIRNLEX:908") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "MFB") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:mfb") AnnotationAssertion( "BIRNLEX:908") AnnotationAssertion( "DHBA:10587") AnnotationAssertion( "FMA:62064") AnnotationAssertion( "GAID:736") AnnotationAssertion( "HBA:265505190") AnnotationAssertion( "MBA:54") AnnotationAssertion( "MESH:D008474") AnnotationAssertion( "NCIT:C13083") AnnotationAssertion( "TAO:0005111") AnnotationAssertion(Annotation( "BIRNLEX:908") "UMLS:C0025055") AnnotationAssertion(Annotation( "ncithesaurus:Medial_Forebrain_Bundle") "UMLS:C0025055") AnnotationAssertion( "ZFA:0005111") AnnotationAssertion(Annotation( "BIRNLEX:908") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=433") AnnotationAssertion( "medial forebrain fasciculus") AnnotationAssertion( "telencephalic medial fasciculus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:433") Annotation( ) "fasciculus longitudinalis telencephali medialis") AnnotationAssertion(Annotation( ) Annotation( ) "fasciculus medialis telencephali") AnnotationAssertion(Annotation( "NeuroNames:433") Annotation( ) "fasciculus medialis telencephalicus") AnnotationAssertion(Annotation( "NeuroNames:433") Annotation( ) "fasciculus prosencephalicus medialis") AnnotationAssertion(Annotation( "ZFA:0005111") Annotation( ) "medial forebrain bundles") AnnotationAssertion(Annotation( "NeuroNames:433") "median forebrain bundle") AnnotationAssertion( "UBERON:0001910") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "medial forebrain bundle") SubClassOf( ) SubClassOf(Annotation( "NIFSTD"^^xsd:string) ObjectSomeValuesFrom( )) DisjointClasses(Annotation( "lexical"^^xsd:string) ) # Class: (mammary gland) AnnotationAssertion(Annotation( ) Annotation( ) Annotation( "BTO:0000817") "A specialized accessory gland of the skin of mammals that secretes milk. The gland is typically only developed in females, and regresses in males.") AnnotationAssertion( "Originally this was classified as a female reproductive structure, as it was in the MP in 2011") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000398") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( ) "Any of the milk-producing apocrine glands typically occurring in pairs in female mammals and consisting of lobes containing clusters of alveoli with a system of ducts to convey the milk to an external nipple or teat. [TFD][VHOG]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000398") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0072528305 Kardong KV, Vertebrates: Comparative Anatomy, Function, Evolution (2006) p.224") "The detailed similarities of mammary glands in living monotremes, marsupials, and eutherians argue for a monophyletic origin of these glands, perhaps by the combination of parts of preexisting sebaceous and sweat glands.[well established][VHOG]") AnnotationAssertion( "mammary") AnnotationAssertion( "A mouse mammary gland contains a single duct or sinus, forming 5-10 secondary ducts") AnnotationAssertion( "The male Dayak fruit bat has lactating mammary glands") AnnotationAssertion( "The mammary glands of humans are in the thoracid/breast region. In other mammals they may be located elsewhere on the mammary ridges.") AnnotationAssertion( "The BTO class represents the combination of nipple plus lobe") AnnotationAssertion( "The FMA class represents an individule lobe. The nipple is not a part") AnnotationAssertion( "The MA class represents a composite structure, including the nipple, fat, connective tissue, smooth muscle as parts") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0000817") AnnotationAssertion( "CALOHA:TS-0595") AnnotationAssertion( "EFO:0000854") AnnotationAssertion( "EMAPA:17759") AnnotationAssertion( "EV:0100125") AnnotationAssertion( "FMA:286452") AnnotationAssertion( "MA:0000145") AnnotationAssertion( "MAT:0000073") AnnotationAssertion( "MESH:D008321") AnnotationAssertion( "MIAA:0000073") AnnotationAssertion( "NCIT:C12367") AnnotationAssertion( "OpenCyc:Mx4rvVjVq5wpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Mammary_Gland") "UMLS:C0929301") AnnotationAssertion( "VHOG:0000398") AnnotationAssertion(Annotation( "FMA:57983") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "glandula mammaria") AnnotationAssertion(Annotation( "FMA:62088") "lactiferous gland") AnnotationAssertion( "lobe of breast") AnnotationAssertion(Annotation( "NCBITaxon:9255") "milk patch") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0000817") "Brustdruese") AnnotationAssertion(Annotation( ) "dug") AnnotationAssertion(Annotation( ) Annotation( ) "glandula mammaria") AnnotationAssertion(Annotation( "FMA:62088") "lobe of mammary gland") AnnotationAssertion(Annotation( "BTO:0000817") "mamma") AnnotationAssertion(Annotation( ) "mammae") AnnotationAssertion( "UBERON:0001911") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "mammary gland") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/6/64/Illu_breast_anatomy.jpg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lobule of mammary gland) AnnotationAssertion(Annotation( "FMA:62090") "Organ component of the mammary gland which consists of an aggregate of mammary alveoli that communicate with a lobular lactiferous duct.[FMA].") AnnotationAssertion( "TODO - ensure correct terminology for lobes/lobules. In mouse there are no distinct lobes (ISBN:0123813611), here lobule appears to be synonymous with acinus") AnnotationAssertion( "EMAPA:36634") AnnotationAssertion( "FMA:62090") AnnotationAssertion( "MA:0000793") AnnotationAssertion(Annotation( "FMA:62090") "acinus of mammary gland") AnnotationAssertion(Annotation( "FMA:62090") "lactiferous acinus") AnnotationAssertion(Annotation( "FMA:62090") "lactiferous gland lobule") AnnotationAssertion(Annotation( "FMA:62090") "lactiferous lobule") AnnotationAssertion(Annotation( "FMA:62090") "lobule of lactiferous gland") AnnotationAssertion(Annotation( "FMA:62090") "lobule of mammary gland") AnnotationAssertion(Annotation( "FMA:62090") "mammary acinus") AnnotationAssertion(Annotation( "MA:0000793") "mammary gland lobule") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001912") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "lobule of mammary gland") SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (milk) AnnotationAssertion(Annotation( ) "An emulsion of fat globules within a fluid that is secreted by the mammary gland during lactation.") AnnotationAssertion( "to axiomatize the different forms of mammary gland secretion an ontology of the phases of pregnancy/lactation is required. Using the existing GO def of lactation is circular.") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001263") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0072528305 Kardong KV, Vertebrates: Comparative Anatomy, Function, Evolution (2006) p.224") "The detailed similarities of mammary glands in living monotremes, marsupials, and eutherians argue for a monophyletic origin of these glands, perhaps by the combination of parts of preexisting sebaceous and sweat glands.[well established][VHOG]") AnnotationAssertion(Annotation( "ncit"^^xsd:string) "ncit:Milk refers specifically to cow milk") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0000868") AnnotationAssertion( "CALOHA:TS-0636") AnnotationAssertion( "EMAPA:36540") AnnotationAssertion( "ENVO:02000031") AnnotationAssertion( "EV:0100126") AnnotationAssertion( "FMA:62100") AnnotationAssertion( "GAID:1230") AnnotationAssertion( "MA:0002552") AnnotationAssertion( "MAT:0000056") AnnotationAssertion( "MESH:A13.622") AnnotationAssertion( "MIAA:0000056") AnnotationAssertion( "NCIT:C13401") AnnotationAssertion( "OpenCyc:Mx4rvVjGZJwpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Breast_Fluid_or_Secretion") "UMLS:C1511310") AnnotationAssertion( "VHOG:0001263") AnnotationAssertion( "galen:Milk") AnnotationAssertion( "mammary gland milk") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001913") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "milk") SubClassOf( ) SubClassOf( ) # Class: (colostrum) AnnotationAssertion(Annotation( ) Annotation( "MESH:A12.200.194") "The thin, yellow, serous fluid secreted by the mammary glands during pregnancy and immediately postpartum before lactation begins. It consists of immunologically active substances, white blood cells, water, protein, fat, and carbohydrates.") AnnotationAssertion( "colostral") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0000276") AnnotationAssertion( "CALOHA:TS-0167") AnnotationAssertion( "FMA:62101") AnnotationAssertion( "GAID:1159") AnnotationAssertion( "MA:0002551") AnnotationAssertion( "MESH:D003126") AnnotationAssertion( "NCIT:C32348") AnnotationAssertion(Annotation( "ncithesaurus:Colostrum") "UMLS:C0009413") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001914") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "colostrum") SubClassOf( ) # Class: (endothelium of capillary) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An endothelium that is part of a capillary [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( "BTO:0004954") AnnotationAssertion( "CALOHA:TS-0112") AnnotationAssertion( "EMAPA:36292") AnnotationAssertion( "FMA:62114") AnnotationAssertion( "MA:0000711") AnnotationAssertion( "NCIT:C49215") AnnotationAssertion(Annotation( "ncithesaurus:Capillary_Endothelium") "UMLS:C0006904") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "blood capillary endothelium") AnnotationAssertion( "capillary endothelium") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "capillary vessel endothelium") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "endothelium of blood capillary") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "endothelium of capillary vessel") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001915") AnnotationAssertion(rdfs:label "endothelium of capillary") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (endothelium of arteriole) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An endothelium that is part of an arteriole [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:36286") AnnotationAssertion( "FMA:62115") AnnotationAssertion( "MA:0000705") AnnotationAssertion( "NCIT:C49192") AnnotationAssertion(Annotation( "ncithesaurus:Arteriole_Endothelium") "UMLS:C1179024") AnnotationAssertion( "arteriole endothelium") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001916") AnnotationAssertion(rdfs:label "endothelium of arteriole") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (endothelium of artery) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An endothelium that is part of an artery [Automatically generated definition].") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0011013") Annotation( "AAO"^^xsd:string) Annotation( "XAO:curator") "The endothelium is the thin layer of cells that lines the interior surface of blood vessels, forming an interface between circulating blood in the lumen and the rest of the vessel wall.[AAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001215") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0030259821 Ruppert EE, Fox RS, Barnes RD, Invertebrate zoology: a functional evolutionary approach (2003) p.207") "Vertebrates and a very few invertebrates such as squids have evolved a secondary epithelium, the endothelium, that lines their blood vessels.[well established][VHOG]") AnnotationAssertion( ) AnnotationAssertion( "AAO:0011013") AnnotationAssertion( "BTO:0004757") AnnotationAssertion( "EMAPA:35148") AnnotationAssertion( "FMA:62116") AnnotationAssertion( "MA:0000707") AnnotationAssertion( "NCIT:C49194") AnnotationAssertion(Annotation( "ncithesaurus:Artery_Endothelium") "UMLS:C1179025") AnnotationAssertion( "VHOG:0001215") AnnotationAssertion( "XAO:0000357") AnnotationAssertion( "arterial endothelium") AnnotationAssertion( "artery endothelium") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001917") AnnotationAssertion(rdfs:label "endothelium of artery") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (endothelium of venule) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An endothelium that is part of a venule [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:36290") AnnotationAssertion( "FMA:62117") AnnotationAssertion( "MA:0000716") AnnotationAssertion( "NCIT:C49319") AnnotationAssertion(Annotation( "ncithesaurus:Venule_Endothelium") "UMLS:C1179026") AnnotationAssertion( "venule endothelium") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001918") AnnotationAssertion(rdfs:label "endothelium of venule") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (endothelium of vein) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An endothelium that is part of a vein [Automatically generated definition].") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001216") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0030259821 Ruppert EE, Fox RS, Barnes RD, Invertebrate zoology: a functional evolutionary approach (2003) p.207") "Vertebrates and a very few invertebrates such as squids have evolved a secondary epithelium, the endothelium, that lines their blood vessels.[well established][VHOG]") AnnotationAssertion( ) AnnotationAssertion( "AAO:0011110") AnnotationAssertion( "BTO:0004756") AnnotationAssertion( "EMAPA:36288") AnnotationAssertion( "FMA:62118") AnnotationAssertion( "MA:0000712") AnnotationAssertion( "NCIT:C49317") AnnotationAssertion(Annotation( "ncithesaurus:Vein_Endothelium") "UMLS:C1179027") AnnotationAssertion( "VHOG:0001216") AnnotationAssertion( "XAO:0000358") AnnotationAssertion( "vein endothelium") AnnotationAssertion( "venous endothelium") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "VHOG:0001216") "veinous endothelium") AnnotationAssertion( "UBERON:0001919") AnnotationAssertion(rdfs:label "endothelium of vein") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (paraventricular nucleus of thalamus) AnnotationAssertion(Annotation( "Dorlands_Medical_Dictionary:MerckSource") "The nucleus paraventricularis anterior thalami and nuclues paraventricularis posterior thalami, two of the nuclei mediani thalami; they are situated on the dorsomedial wall of the thalamus, juxtaposed to the third ventricle.") AnnotationAssertion(Annotation( "BIRNLEX:764") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "PV") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:PV") AnnotationAssertion( "BAMS:PVT") AnnotationAssertion( "BIRNLEX:764") AnnotationAssertion( "BM:Die-Th-Pa") AnnotationAssertion( "BTO:0002460") AnnotationAssertion( "DHBA:10457") AnnotationAssertion( "EMAPA:35666") AnnotationAssertion( "FMA:62152") AnnotationAssertion( "HBA:4533") AnnotationAssertion( "MA:0000866") AnnotationAssertion( "MBA:149") AnnotationAssertion(Annotation( "BIRNLEX:764") "UMLS:C0175253") AnnotationAssertion(Annotation( "BIRNLEX:764") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=308") AnnotationAssertion(Annotation( "FMA:62152") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "nuclei paraventriculares thalami") AnnotationAssertion( "paraventricular gray") AnnotationAssertion(Annotation( ) "paraventricular nuclei of thalamus") AnnotationAssertion( "paraventricular thalamic nucleus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:308") Annotation( ) "nucleus paramedianus (Hassler)") AnnotationAssertion(Annotation( "NeuroNames:308") Annotation( ) "nucleus paraventricularis thalami") AnnotationAssertion(Annotation( ) "paraventricular nuclei") AnnotationAssertion(Annotation( "NeuroNames:308") "paraventricular nucleus of the thalamus") AnnotationAssertion( "UBERON:0001920") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "paraventricular nucleus of thalamus") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/en/thumb/e/ef/PVNss.jpg/200px-PVNss.jpg"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (reuniens nucleus) AnnotationAssertion(Annotation( "BIRNLEX:770") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "Re") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:RE") AnnotationAssertion( "BAMS:Re") AnnotationAssertion( "BIRNLEX:770") AnnotationAssertion( "BTO:0002459") AnnotationAssertion( "DHBA:10403") AnnotationAssertion( "EMAPA:35602") AnnotationAssertion( "FMA:62153") AnnotationAssertion( "MA:0000865") AnnotationAssertion( "MBA:181") AnnotationAssertion(Annotation( "BIRNLEX:770") "UMLS:C0228327") AnnotationAssertion(Annotation( "BIRNLEX:770") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=309") AnnotationAssertion(Annotation( "FMA:62153") "medioventral nucleus") AnnotationAssertion( "nucleus reuniens") AnnotationAssertion(Annotation( "FMA:62153") "reuniens thalamic nucleus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:309") Annotation( ) "nucleus endymalis (Hassler)") AnnotationAssertion(Annotation( "NeuroNames:309") "nucleus of reunions") AnnotationAssertion(Annotation( "NeuroNames:309") "nucleus reuniens (Malone)") AnnotationAssertion(Annotation( "NeuroNames:309") Annotation( ) "nucleus reuniens thalami") AnnotationAssertion(Annotation( "BAMS:RE") "reuniens nucleus of the thalamus") AnnotationAssertion( "UBERON:0001921") AnnotationAssertion(rdfs:label "reuniens nucleus") SubClassOf( ) SubClassOf(Annotation( "NIFSTD"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (parafascicular nucleus) AnnotationAssertion(Annotation( "BIRNLEX:952") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "PF") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:PF") AnnotationAssertion( "BIRNLEX:952") AnnotationAssertion( "BM:Die-Th-Pf") AnnotationAssertion( "DHBA:10450") AnnotationAssertion( "DMBA:16442") AnnotationAssertion( "EMAPA:35659") AnnotationAssertion( "EV:0100202") AnnotationAssertion( "FMA:62166") AnnotationAssertion( "HBA:4439") AnnotationAssertion( "MA:0000874") AnnotationAssertion( "MBA:930") AnnotationAssertion( "NCIT:C33260") AnnotationAssertion(Annotation( "BIRNLEX:952") "UMLS:C0228352") AnnotationAssertion(Annotation( "ncithesaurus:Parafascicular_Nucleus_of_the_Thalamus") "UMLS:C0228352") AnnotationAssertion(Annotation( "BIRNLEX:952") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=324") AnnotationAssertion(Annotation( "BIRNLEX:952") "nuclei parafasciculares thalami") AnnotationAssertion(Annotation( "BIRNLEX:952") "nucleus parafascicularis") AnnotationAssertion(Annotation( "BIRNLEX:952") "nucleus parafascicularis (Hassler)") AnnotationAssertion(Annotation( "BIRNLEX:952") "nucleus parafascicularis thalami") AnnotationAssertion(Annotation( "BIRNLEX:952") "parafascicular nucleus (vogt)") AnnotationAssertion( "parafascicular nucleus of thalamus") AnnotationAssertion(Annotation( "BIRNLEX:952") "parafascicular nucleus of the thalamus") AnnotationAssertion( "parafascicular thalamic nucleus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001922") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "parafascicular nucleus") SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (central medial nucleus) AnnotationAssertion(Annotation( "MP:0008929") "A small cell group in the interthalamic adhesion of the thalamus that occupy the midline region of the internal medullary lamina, between the left and right paracentral nuclei.") AnnotationAssertion(Annotation( "BIRNLEX:971") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "CM") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:CM") AnnotationAssertion( "BAMS:CMN") AnnotationAssertion( "BAMS:GMN") AnnotationAssertion( "BIRNLEX:971") AnnotationAssertion( "BM:Die-CeM") AnnotationAssertion( "BTO:0003753") AnnotationAssertion( "DHBA:10445") AnnotationAssertion( "EMAPA:35206") AnnotationAssertion( "FMA:62171") AnnotationAssertion( "HBA:4438") AnnotationAssertion( "MA:0000872") AnnotationAssertion( "MBA:599") AnnotationAssertion( "PBA:128012616") AnnotationAssertion(Annotation( "BIRNLEX:971") "UMLS:C0920328") AnnotationAssertion(Annotation( "BIRNLEX:971") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=321") AnnotationAssertion( "central medial nucleus of thalamus") AnnotationAssertion(Annotation( "BIRNLEX:971") "central medial nucleus thalamus (rioch 1928)") AnnotationAssertion( "central medial thalamic nucleus") AnnotationAssertion(Annotation( "BIRNLEX:971") "nucleus centralis medialis") AnnotationAssertion(Annotation( "BIRNLEX:971") "nucleus centralis medialis thalami") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:321") "central medial nucleus of the thalamus") AnnotationAssertion(Annotation( "BAMS:CM") "centromedial thalamic nucleus") AnnotationAssertion( "UBERON:0001923") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "central medial nucleus") SubClassOf( ) SubClassOf(Annotation( "NIFSTD"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (paracentral nucleus) AnnotationAssertion(Annotation( "MP:0008928") "One of the intralaminar nuclei of the thalamus, located medial to the central lateral nucleus.") AnnotationAssertion( "TODO - relationships") AnnotationAssertion(Annotation( "BIRNLEX:981") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "PC") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:PAC") AnnotationAssertion( "BAMS:PC") AnnotationAssertion( "BAMS:PCM") AnnotationAssertion( "BAMS:PCN") AnnotationAssertion( "BIRNLEX:981") AnnotationAssertion( "BM:Die-Th-Pc") AnnotationAssertion( "DHBA:10446") AnnotationAssertion( "DMBA:16416") AnnotationAssertion( "EMAPA:35658") AnnotationAssertion( "EV:0100204") AnnotationAssertion( "FMA:62172") AnnotationAssertion( "HBA:4435") AnnotationAssertion( "MA:0000873") AnnotationAssertion( "MBA:907") AnnotationAssertion(Annotation( "BIRNLEX:981") "UMLS:C0228354") AnnotationAssertion(Annotation( "BIRNLEX:981") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=322") AnnotationAssertion(Annotation( "BIRNLEX:981") "nucleus centralis lateralis superior (kusama)") AnnotationAssertion(Annotation( "BIRNLEX:981") "nucleus paracentral") AnnotationAssertion(Annotation( "BIRNLEX:981") "nucleus paracentral thalami") AnnotationAssertion(Annotation( "FMA:62172") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "nucleus paracentralis thalami") AnnotationAssertion( "paracentral nucleus of thalamus") AnnotationAssertion(Annotation( "BIRNLEX:981") "paracentral nucleus thalamus (gurdjian 1927)") AnnotationAssertion( "paracentral thalamic nucleus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:322") Annotation( ) "nucleus paracentralis") AnnotationAssertion(Annotation( "NeuroNames:322") "paracentral nucleus of the thalamus") AnnotationAssertion( "UBERON:0001924") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "paracentral nucleus") SubClassOf( ) SubClassOf(Annotation( "NIFSTD"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (ventral lateral nucleus of thalamus) AnnotationAssertion(Annotation( ) "The ventral lateral nucleus (VL) is a nucleus of the thalamus. [WP,unvetted].") AnnotationAssertion(Annotation( "BIRNLEX:1237") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "VL") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:VL") AnnotationAssertion( "BAMS:VTh") AnnotationAssertion( "BIRNLEX:1237") AnnotationAssertion( "BM:Die-Th-VL") AnnotationAssertion( "BTO:0002463") AnnotationAssertion( "DHBA:10420") AnnotationAssertion( "DMBA:16428") AnnotationAssertion( "EMAPA:36654") AnnotationAssertion( "FMA:62186") AnnotationAssertion( "HBA:12925") AnnotationAssertion( "NCIT:C33862") AnnotationAssertion( "TAO:0000306") AnnotationAssertion(Annotation( "BIRNLEX:1237") "UMLS:C0228339") AnnotationAssertion(Annotation( "ncithesaurus:Ventrolateral_Nucleus_of_the_Thalamus") "UMLS:C0228339") AnnotationAssertion( "ZFA:0000306") AnnotationAssertion(Annotation( "BIRNLEX:1237") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=337") AnnotationAssertion(Annotation( "FMA:62186") "lateral ventral nucleus of thalamus") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) "nuclei ventrales laterales thalami") AnnotationAssertion(Annotation( "BIRNLEX:1237") "nucleus ventralis intermedius") AnnotationAssertion(Annotation( "BIRNLEX:1237") "nucleus ventralis lateralis") AnnotationAssertion(Annotation( "BIRNLEX:1237") "nucleus ventralis lateralis thalami") AnnotationAssertion(Annotation( "BIRNLEX:1237") "nucleus ventralis thalami lateralis") AnnotationAssertion(Annotation( "BIRNLEX:1237") "nucleus ventrolateralis thalami") AnnotationAssertion(Annotation( "FMA:62186") "ventral lateral complex of thalamus") AnnotationAssertion(Annotation( "FMA:62186") "ventral lateral nucleus") AnnotationAssertion(Annotation( "FMA:62186") "ventral lateral nucleus of thalamus") AnnotationAssertion(Annotation( "FMA:62186") "ventral lateral thalamic nuclei") AnnotationAssertion(Annotation( "BIRNLEX:1237") "ventral lateral thalamic nucleus") AnnotationAssertion(Annotation( "FMA:62186") "ventrolateral thalamic nucleus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BAMS:VTh") "lateral-ventral nuclei of thalamus") AnnotationAssertion(Annotation( "BTO:0002463") "nuclei ventrales laterales thalami") AnnotationAssertion(Annotation( "BTO:0002463") "ventral lateral nuclei of thalamus") AnnotationAssertion(Annotation( "BAMS:VL") "ventrolateral complex") AnnotationAssertion( "UBERON:0001925") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "ventral lateral nucleus of thalamus") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/1/1b/ThalamicNuclei.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (lateral geniculate body) AnnotationAssertion(Annotation( "ISBN:0-683-40008-8"^^xsd:string) Annotation( "MP:0004165") "The group of neurons that serve as the primary processor of visual information received from the retina via the optic tract and send processed information to the visual cortex of the occipital lobe.") AnnotationAssertion(Annotation( "Ariens, p. 1192") ) AnnotationAssertion(Annotation( "BTO"^^xsd:string) "BTO has distinct classes for body and nucleus, but other sources treat as identical") AnnotationAssertion(Annotation( "BIRNLEX:1662") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "LGN") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:C.gl.") AnnotationAssertion( "BAMS:LG") AnnotationAssertion( "BIRNLEX:1662") AnnotationAssertion( "BTO:0004366") AnnotationAssertion( "BTO:0004367") AnnotationAssertion( "DHBA:10429") AnnotationAssertion( "EFO:0001988") AnnotationAssertion( "EMAPA:35478") AnnotationAssertion( "EV:0100219") AnnotationAssertion( "FMA:62209") AnnotationAssertion( "MA:0000869") AnnotationAssertion( "NCIT:C32556") AnnotationAssertion( "PBA:128013070") AnnotationAssertion(Annotation( "BIRNLEX:1662") "UMLS:C0086526") AnnotationAssertion(Annotation( "ncithesaurus:External_Geniculate_Body") "UMLS:C0086526") AnnotationAssertion(Annotation( "BIRNLEX:1662") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=352") AnnotationAssertion(Annotation( "BIRNLEX:1662") "corpus geniculatum laterales") AnnotationAssertion( "lateral geniculate complex") AnnotationAssertion( "lateral geniculate nucleus") AnnotationAssertion(Annotation( "BIRNLEX:1662") "nucleus geniculatus lateralis") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0004367") Annotation( ) "LGB") AnnotationAssertion(Annotation( "BTO:0004367") "corpus geniculatum externum") AnnotationAssertion(Annotation( "BTO:0004367") "corpus geniculatum laterale") AnnotationAssertion(Annotation( "NeuroNames:352") Annotation( ) "corpus geniculatus lateralis") AnnotationAssertion(Annotation( ) "external geniculate body") AnnotationAssertion(Annotation( "BAMS:LG") "nucleus corporis geniculati lateralis") AnnotationAssertion(Annotation( "NeuroNames:352") Annotation( ) "nucleus corporis geniculati lateralis") AnnotationAssertion( "UBERON:0001926") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "lateral geniculate body") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/b/b7/Gray719.png"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses(Annotation( "lexical"^^xsd:string) ) # Class: (medial geniculate body) AnnotationAssertion(Annotation( "BIRNLEX:1670") "Nuclear complex of the thalamus situated on the caudal, subpial aspect of the thalamus (Brodal, Neurological Anatomy, 3rd ed., 1981, pg 622).") AnnotationAssertion(Annotation( "BIRNLEX:1670") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "MGN") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:C.gm.") AnnotationAssertion( "BAMS:MG") AnnotationAssertion( "BIRNLEX:1670") AnnotationAssertion( "BM:Die-Th-MG") AnnotationAssertion( "BTO:0002674") AnnotationAssertion( "DHBA:10434") AnnotationAssertion( "DMBA:16462") AnnotationAssertion( "EFO:0001968") AnnotationAssertion( "EMAPA:35546") AnnotationAssertion( "EV:0100218") AnnotationAssertion( "FMA:62211") AnnotationAssertion( "HBA:12926") AnnotationAssertion( "MA:0000870") AnnotationAssertion( "MBA:475") AnnotationAssertion( "NCIT:C32843") AnnotationAssertion(Annotation( "BIRNLEX:1670") "UMLS:C0086596") AnnotationAssertion(Annotation( "ncithesaurus:Internal_Geniculate_Body") "UMLS:C0086596") AnnotationAssertion(Annotation( "BIRNLEX:1670") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=355") AnnotationAssertion(Annotation( "BIRNLEX:1670") "corpus geniculatum mediale") AnnotationAssertion( "medial geniculate complex") AnnotationAssertion( "medial geniculate nuclei") AnnotationAssertion( "medial geniculate nucleus") AnnotationAssertion(Annotation( "FMA:62211") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "nuclei corporis geniculati medialis") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0002674") "MGB") AnnotationAssertion(Annotation( "NeuroNames:355") Annotation( ) "corpus geniculatus medialis") AnnotationAssertion(Annotation( "ncithesaurus:Internal_Geniculate_Body") "internal geniculate body") AnnotationAssertion(Annotation( "BAMS:MG") "medial geniculate complex of dorsal thalamus") AnnotationAssertion(Annotation( "NeuroNames:355") Annotation( ) "nucleus corporis geniculati medialis") AnnotationAssertion(Annotation( "NeuroNames:355") Annotation( ) "nucleus geniculatus medialis") AnnotationAssertion( "UBERON:0001927") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "medial geniculate body") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/1/1b/ThalamicNuclei.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "NIFSTD"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (preoptic area) AnnotationAssertion(Annotation( ) Annotation( "ZFIN:curator"^^xsd:string) "Area of the forebrain between the anterior commissure and optic chiasm.") AnnotationAssertion( ) AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0000470") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "Area of the forebrain anterior to the posterior tuberculum and the hypothalamus and ventral to the ventral thalamus. See Figure 7, Atlas of Early Zebrafish Brain Development.[TAO]") AnnotationAssertion( "Located in the hypothalamus in amniotes[PMC4038951]") AnnotationAssertion(Annotation( ) Annotation( ) "POA") AnnotationAssertion(Annotation( "BIRNLEX:1706") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "POA") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:POA") AnnotationAssertion( "BIRNLEX:1706") AnnotationAssertion( "BM:Die-Hy-POA") AnnotationAssertion( "BTO:0001796") AnnotationAssertion( "CALOHA:TS-0822") AnnotationAssertion( "DMBA:15577") AnnotationAssertion( "EFO:0002523") AnnotationAssertion( "EMAPA:36655") AnnotationAssertion( "FMA:62313") AnnotationAssertion( "GAID:644") AnnotationAssertion( "HBA:4541") AnnotationAssertion( "MESH:A08.186.211.730.385.357.342.450") AnnotationAssertion( "TAO:0000470") AnnotationAssertion(Annotation( "BIRNLEX:1706") "UMLS:C0033063") AnnotationAssertion(Annotation( "BIRNLEX:1706") "UMLS:C1284641") AnnotationAssertion( "ZFA:0000470") AnnotationAssertion(Annotation( "BIRNLEX:1706") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=377") AnnotationAssertion( "preoptic nuclei") AnnotationAssertion( "preoptic region of hypothalamus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0001796") "area hypothalamica rostralis") AnnotationAssertion( "area praeoptica") AnnotationAssertion(Annotation( ) Annotation( ) "area preoptica") AnnotationAssertion(Annotation( "NeuroNames:377") Annotation( ) "nuclei preoptici") AnnotationAssertion(Annotation( "BTO:0001796") "preoptic hypothalamic area") AnnotationAssertion(Annotation( "BTO:0001796") "preoptic hypothalamic region") AnnotationAssertion( "preoptic region") AnnotationAssertion(Annotation( "BTO:0001796") "regio hypothalamica anterior") AnnotationAssertion( "UBERON:0001928") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "preoptic area") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/8/8c/HypothalamicNuclei.PNG"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (supraoptic nucleus) AnnotationAssertion(Annotation( ) Annotation( ) "The supraoptic nucleus (SON) is a nucleus of magnocellular neurosecretory cells in the hypothalamus of the mammalian brain. The nucleus is situated at the base of the brain, adjacent to the optic chiasm. [WP,unvetted].") AnnotationAssertion(Annotation( "BIRNLEX:1411") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "SO") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:SO") AnnotationAssertion( "BAMS:SON") AnnotationAssertion( "BIRNLEX:1411") AnnotationAssertion( "BM:Die-Hy-SON") AnnotationAssertion( "BTO:0002697") AnnotationAssertion( "DHBA:10481") AnnotationAssertion( "DMBA:15633") AnnotationAssertion( "EFO:0002476") AnnotationAssertion( "EMAPA:35843") AnnotationAssertion( "EV:0100227") AnnotationAssertion( "FMA:62317") AnnotationAssertion( "GAID:646") AnnotationAssertion( "HBA:12907") AnnotationAssertion( "MA:0000849") AnnotationAssertion( "MBA:390") AnnotationAssertion( "MESH:A08.186.211.730.385.357.342.650") AnnotationAssertion(Annotation( "BIRNLEX:1411") "UMLS:C0038869") AnnotationAssertion(Annotation( "BIRNLEX:1411") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=385") AnnotationAssertion(Annotation( "BTO:0002697") "nucleus supraopticus") AnnotationAssertion( "supra-optic nucleus") AnnotationAssertion( "supraoptic nucleus of hypothalamus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "nucleus supraopticus") AnnotationAssertion(Annotation( "NeuroNames:385") Annotation( ) "nucleus supraopticus hypothalami") AnnotationAssertion(Annotation( "NeuroNames:385") Annotation( ) "nucleus tangentialis (Riley)") AnnotationAssertion(Annotation( "NeuroNames:385") "supraoptic nucleus proper (Lenhossek)") AnnotationAssertion(Annotation( "NeuroNames:385") "supraoptic nucleus, general") AnnotationAssertion(Annotation( "BAMS:SO") "supraoptic nucleus, proper") AnnotationAssertion( "UBERON:0001929") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "supraoptic nucleus") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/d/d7/SONss.jpg"^^xsd:anyURI) AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/en/thumb/d/d7/SONss.jpg/200px-SONss.jpg"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "ABA"^^xsd:string) Annotation( "MA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (paraventricular nucleus of hypothalamus) AnnotationAssertion(Annotation( "BIRNLEX:1407") "Nucleus in the anterior part of the hypothalamus. (MSH) * one of the magnocellular hypothalamic nuclei, an elongated plate of large, deeply staining cells located close to the third ventricle in the anterior hypothalamic area; major source of oxytocin and to a lesser extent, of antidiuretic hormone, neurohormones, which are carried to the neurohypophysis along the paraventriculohypophysial tract. (CSP).") AnnotationAssertion(Annotation( "BIRNLEX:1407") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "Pa") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:PAH") AnnotationAssertion( "BAMS:PVH") AnnotationAssertion( "BAMS:Pa") AnnotationAssertion( "BIRNLEX:1407") AnnotationAssertion( "BM:Die-Hy-PAH") AnnotationAssertion( "BTO:0002476") AnnotationAssertion( "DHBA:10476") AnnotationAssertion( "EFO:0002469") AnnotationAssertion( "EMAPA:35665") AnnotationAssertion( "EV:0100229") AnnotationAssertion( "FMA:62320") AnnotationAssertion( "GAID:643") AnnotationAssertion( "HBA:12905") AnnotationAssertion( "MA:0000848") AnnotationAssertion( "MBA:38") AnnotationAssertion( "MESH:A08.186.211.730.385.357.342.400") AnnotationAssertion(Annotation( "BIRNLEX:1407") "UMLS:C0030532") AnnotationAssertion(Annotation( "BIRNLEX:1407") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=387") AnnotationAssertion( "filiform nucleus") AnnotationAssertion( "paraventricular hypothalamic nucleus") AnnotationAssertion( "paraventricular nucleus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:387") Annotation( ) "nuclei paraventriculares") AnnotationAssertion(Annotation( ) Annotation( ) "nuclei paraventricularis hypothalami") AnnotationAssertion(Annotation( "NeuroNames:387") Annotation( ) "nucleus filiformis") AnnotationAssertion(Annotation( "NeuroNames:387") Annotation( ) "nucleus hypothalami filiformis") AnnotationAssertion(Annotation( "NeuroNames:387") Annotation( ) "nucleus hypothalami paraventricularis") AnnotationAssertion(Annotation( "BTO:0002476") "nucleus paraventricularis hypothalami") AnnotationAssertion(Annotation( "NeuroNames:387") "paraventricular nucleus hypothalamus (Malone)") AnnotationAssertion(Annotation( "NeuroNames:387") "paraventricular nucleus of the hypothalamus") AnnotationAssertion(Annotation( "BAMS:PVH") "parvocellular hypothalamic nucleus") AnnotationAssertion(Annotation( "NeuroNames:387") "subcommissural nucleus (Ziehen)") AnnotationAssertion( "UBERON:0001930") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "paraventricular nucleus of hypothalamus") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/e/ef/PVNss.jpg"^^xsd:anyURI) AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/en/thumb/e/ef/PVNss.jpg/200px-PVNss.jpg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lateral preoptic nucleus) AnnotationAssertion(Annotation( ) "The lateral preoptic nucleus is lateral to the medial preoptic nucleus. It also mediates non-REM sleep onset.[WP,unvetted].") AnnotationAssertion(Annotation( "BIRNLEX:1722") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "LPO") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:LPO") AnnotationAssertion( "BIRNLEX:1722") AnnotationAssertion( "BM:Die-Hy-LPO") AnnotationAssertion( "DHBA:10471") AnnotationAssertion( "EMAPA:35483") AnnotationAssertion( "FMA:62326") AnnotationAssertion( "HBA:4552") AnnotationAssertion( "MA:0000835") AnnotationAssertion( "MBA:226") AnnotationAssertion(Annotation( "BIRNLEX:1722") "UMLS:C0175312") AnnotationAssertion(Annotation( "BIRNLEX:1722") "UMLS:C1289556") AnnotationAssertion(Annotation( "BIRNLEX:1722") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=381") AnnotationAssertion( "lateral preoptic area") AnnotationAssertion( "lateral preoptic hypothalamic nucleus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:381") Annotation( ) "area praeoptica lateralis") AnnotationAssertion(Annotation( "NeuroNames:381") Annotation( ) "area preoptica lateralis") AnnotationAssertion(Annotation( "NeuroNames:381") Annotation( ) "nucleus praeopticus lateralis") AnnotationAssertion(Annotation( "NeuroNames:381") Annotation( ) "nucleus preopticus lateralis") AnnotationAssertion( "UBERON:0001931") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "lateral preoptic nucleus") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/8/8c/HypothalamicNuclei.PNG"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses(Annotation( "lexical"^^xsd:string) ) DisjointClasses(Annotation( "lexical"^^xsd:string) ) # Class: (arcuate nucleus of hypothalamus) AnnotationAssertion(Annotation( ) "The arcuate nucleus (or infundibular nucleus) is an aggregation of neurons in the mediobasal hypothalamus, adjacent to the third ventricle and the median eminence. The arcuate nucleus includes several important populations of neurons, including: Neuroendocrine neurons, Centrally-projecting neurons and Others. [WP,unvetted].") AnnotationAssertion(Annotation( "BTO"^^xsd:string) "the semantics of the BTO class arcuate nucleus are not clear") AnnotationAssertion(Annotation( "BIRNLEX:1638") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "ArcH") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:ARH") AnnotationAssertion( "BAMS:Arc") AnnotationAssertion( "BAMS:ArcH") AnnotationAssertion( "BIRNLEX:1638") AnnotationAssertion( "BM:HAr") AnnotationAssertion( "BTO:0002473") AnnotationAssertion( "BTO:0005534") AnnotationAssertion( "DHBA:10492") AnnotationAssertion( "EMAPA:35142") AnnotationAssertion( "EV:0100230") AnnotationAssertion( "FMA:62329") AnnotationAssertion( "GAID:647") AnnotationAssertion( "HBA:12913") AnnotationAssertion( "MA:0000847") AnnotationAssertion( "MBA:223") AnnotationAssertion( "MESH:A08.186.211.730.385.357.352.081") AnnotationAssertion( "NCIT:C52711") AnnotationAssertion(Annotation( "BIRNLEX:1638") "UMLS:C0003741") AnnotationAssertion(Annotation( "ncithesaurus:Arcuate_Nucleus") "UMLS:C0003741") AnnotationAssertion(Annotation( "BIRNLEX:1638") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=395") AnnotationAssertion( "arcuate hypothalamic nucleus") AnnotationAssertion( "arcuate nucleus") AnnotationAssertion( "arcuate nucleus-2") AnnotationAssertion( "arcuate periventricular nucleus") AnnotationAssertion( "infundibular hypothalamic nucleus") AnnotationAssertion( "infundibular nucleus") AnnotationAssertion( "infundibular periventricular nucleus") AnnotationAssertion(Annotation( "FMA:62329") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "nucleus arcuatus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:395") "arcuate nucleus of the hypothalamus") AnnotationAssertion(Annotation( "NeuroNames:395") Annotation( ) "nucleus arcuatus (hypothalamus)") AnnotationAssertion(Annotation( ) Annotation( ) "nucleus arcuatus hypothalami") AnnotationAssertion(Annotation( "BTO:0002473") "nucleus infundibularis") AnnotationAssertion(Annotation( "NeuroNames:395") Annotation( ) "nucleus infundibularis hypothalami") AnnotationAssertion(Annotation( "BTO:0002473") "nucleus semilunaris") AnnotationAssertion( "UBERON:0001932") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "arcuate nucleus of hypothalamus") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/8/8c/HypothalamicNuclei.PNG"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "NIFSTD"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (retrochiasmatic area) AnnotationAssertion(Annotation( "BIRNLEX:1569") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "RCh") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:RCH") AnnotationAssertion( "BAMS:RCh") AnnotationAssertion( "BIRNLEX:1569") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37732") AnnotationAssertion( "FMA:62330") AnnotationAssertion( "MA:0000841") AnnotationAssertion( "MBA:173") AnnotationAssertion(Annotation( "BIRNLEX:1569") "UMLS:C0262326") AnnotationAssertion(Annotation( "BIRNLEX:1569") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=396") AnnotationAssertion( "retrochiasmatic region") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:396") Annotation( ) "area retrochiasmatica") AnnotationAssertion(Annotation( "NeuroNames:396") Annotation( ) "nucleus supraopticus diffusus") AnnotationAssertion(Annotation( "NeuroNames:396") "retrochiasmatic area") AnnotationAssertion(Annotation( "NeuroNames:396") "retrochiasmatic hypothalamic area") AnnotationAssertion(Annotation( "NeuroNames:396") "supraoptic nucleus, tuberal part") AnnotationAssertion( "UBERON:0001933") AnnotationAssertion(rdfs:label "retrochiasmatic area") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA"^^xsd:string) Annotation( "NIFSTD"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (dorsomedial nucleus of hypothalamus) AnnotationAssertion(Annotation( ) "The Dorsomedial hypothalamic nucleus is a nucleus of the hypothalamus. It is involved in feeding, drinking, and body weight regulation. [WP,unvetted].") AnnotationAssertion(Annotation( "BIRNLEX:1558") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "DMH") AnnotationAssertion( "dorsomedial nucleus") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:DM") AnnotationAssertion( "BAMS:DMH") AnnotationAssertion( "BIRNLEX:1558") AnnotationAssertion( "BM:Die-Hy-DMH") AnnotationAssertion( "BTO:0002474") AnnotationAssertion( "DHBA:10485") AnnotationAssertion( "EMAPA:35297") AnnotationAssertion( "EV:0100232") AnnotationAssertion( "FMA:62331") AnnotationAssertion( "GAID:648") AnnotationAssertion( "HBA:12914") AnnotationAssertion( "MA:0000838") AnnotationAssertion( "MBA:830") AnnotationAssertion( "MESH:A08.186.211.730.385.357.352.270") AnnotationAssertion(Annotation( "BIRNLEX:1558") "UMLS:C0013055") AnnotationAssertion(Annotation( "BIRNLEX:1558") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=397") AnnotationAssertion( "dorsomedial hypothalamic nucleus") AnnotationAssertion( "dorsomedial nucleus of dorsal hypothalamus") AnnotationAssertion( "dorsomedial nucleus of intermediate hypothalamus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:397") "dorsomedial nucleus hypothalamus") AnnotationAssertion(Annotation( "NeuroNames:397") "dorsomedial nucleus of the hypothalamus") AnnotationAssertion(Annotation( "NeuroNames:397") Annotation( ) "nucleus dorsomedialis hypothalami") AnnotationAssertion(Annotation( ) Annotation( ) "nucleus dorsomedialis hypothalamicae intermediae") AnnotationAssertion(Annotation( "BTO:0002474") "nucleus dorsomedialis hypothalamicae intermediae") AnnotationAssertion(Annotation( "NeuroNames:397") Annotation( ) "nucleus hypothalamicus dorsomedialis") AnnotationAssertion( "UBERON:0001934") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "dorsomedial nucleus of hypothalamus") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/8/8c/HypothalamicNuclei.PNG"^^xsd:anyURI) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf(Annotation( "MA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (ventromedial nucleus of hypothalamus) AnnotationAssertion(Annotation( ) "The ventromedial nucleus (sometimes referred to as the ventromedial hypothalamus) is a nucleus of the hypothalamus. [WP,unvetted].") AnnotationAssertion(Annotation( "BIRNLEX:1572") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "VMH") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:VMH") AnnotationAssertion( "BIRNLEX:1572") AnnotationAssertion( "BM:VMH") AnnotationAssertion( "BTO:0002472") AnnotationAssertion( "DHBA:10488") AnnotationAssertion( "DMBA:15675") AnnotationAssertion( "EMAPA:35916") AnnotationAssertion( "EV:0100233") AnnotationAssertion( "FMA:62332") AnnotationAssertion( "GAID:650") AnnotationAssertion( "HBA:12919") AnnotationAssertion( "MA:0000845") AnnotationAssertion( "MBA:693") AnnotationAssertion( "MESH:A08.186.211.730.385.357.352.953") AnnotationAssertion(Annotation( "BIRNLEX:1572") "UMLS:C0042518") AnnotationAssertion(Annotation( "BIRNLEX:1572") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=398") AnnotationAssertion( "ventromedial hypothalamic nucleus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:398") Annotation( ) "nucleus hypothalamicus ventromedialis") AnnotationAssertion(Annotation( "BTO:0002472") "nucleus ventromedialis hypothalami") AnnotationAssertion(Annotation( "NeuroNames:398") "tuberal nucleus (Ganser)") AnnotationAssertion(Annotation( "BTO:0002472") "ventrolateral hypothalamic nucleus") AnnotationAssertion(Annotation( "BTO:0002472") "ventrolateral nucleus of hypothalamus") AnnotationAssertion(Annotation( "NeuroNames:398") "ventromedial nucleus hypothalamus") AnnotationAssertion(Annotation( "BTO:0002472") "ventromedial nucleus of hypothalamus.") AnnotationAssertion(Annotation( "NeuroNames:398") "ventromedial nucleus of the hypothalamus") AnnotationAssertion( "UBERON:0001935") AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "part of tuberal area in MA") AnnotationAssertion(rdfs:label "ventromedial nucleus of hypothalamus") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/8/8c/HypothalamicNuclei.PNG"^^xsd:anyURI) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (tuberomammillary nucleus) AnnotationAssertion(Annotation( ) "The tuberomammillary nucleus is a subnucleus of the posterior third of the hypothalamus. It consists of, largely, histaminergic and is involved with the control of arousal, sleep and circadian rhythm. Axons of the tuberomammillary nucleus project primarily to the cerebral cortex, thalamus, basal ganglia, basal forebrain, and hypothalamus. The projections to the cerebral cortex directly increase cortical activation and arousal, and projections to acetylcholinergic neurons of the basal forebrain and dorsal pons do so indirectly, by increasing the release of acetylcholine in the cerebral cortex. [WP,unvetted].") AnnotationAssertion(Annotation( "BIRNLEX:1271") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "TM") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:TM") AnnotationAssertion( "BIRNLEX:1271") AnnotationAssertion( "DHBA:10496") AnnotationAssertion( "EMAPA:35889") AnnotationAssertion( "EV:0100237") AnnotationAssertion( "FMA:62335") AnnotationAssertion( "HBA:12912") AnnotationAssertion( "MA:0000853") AnnotationAssertion( "MBA:557") AnnotationAssertion(Annotation( "BIRNLEX:1271") "UMLS:C0228377") AnnotationAssertion(Annotation( "BIRNLEX:1271") "UMLS:C1289549") AnnotationAssertion(Annotation( "BIRNLEX:1271") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=427") AnnotationAssertion(Annotation( "BIRNLEX:1271") "caudal magnocellular nucleus") AnnotationAssertion(Annotation( "FMA:62335") "mammilloinfundibular nucleus") AnnotationAssertion(Annotation( "BIRNLEX:1271") "mammiloinfundibular nucleus") AnnotationAssertion(Annotation( "BIRNLEX:1271") "tuberomammillary hypothalamic nucleus") AnnotationAssertion(Annotation( "BIRNLEX:1271") "tuberomammillary nucleus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BIRNLEX:1271") Annotation( ) "TM") AnnotationAssertion(Annotation( "NeuroNames:427") Annotation( ) "nucleus tuberomamillaris") AnnotationAssertion(Annotation( "NeuroNames:427") Annotation( ) "nucleus tuberomamillaris hypothalami") AnnotationAssertion(Annotation( "NeuroNames:427") "tubero-mamillary area") AnnotationAssertion(Annotation( "EV:0100237") Annotation( ) "tuberomamillary nucleus") AnnotationAssertion(Annotation( "NeuroNames:427") "tuberomammillary nucleus, ventral part") AnnotationAssertion(Annotation( "NeuroNames:427") "ventral tuberomammillary nucleus") AnnotationAssertion( "UBERON:0001936") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "tuberomammillary nucleus") SubClassOf( ) SubClassOf(Annotation( "MA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (lateral hypothalamic nucleus) AnnotationAssertion(Annotation( ) "The lateral hypothalamus or lateral hypothalamic area is a part of the hypothalamus. It is concerned with hunger. Damage to this area can cause reduced food intake. Stimulating the lateral hypothalamus causes a desire to eat, while stimulating the ventromedial hypothalamus causes a desire to stop eating.") AnnotationAssertion(Annotation( "BIRNLEX:1199") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "LHy") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:LHy") AnnotationAssertion( "BIRNLEX:1199") AnnotationAssertion( "EV:0100234") AnnotationAssertion( "FMA:62337") AnnotationAssertion( "TAO:0000227") AnnotationAssertion(Annotation( "BIRNLEX:1199") "UMLS:C0086527") AnnotationAssertion( "ZFA:0000227") AnnotationAssertion(Annotation( "BIRNLEX:1199") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=1347") AnnotationAssertion(Annotation( "FMA:62337") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "nucleus hypothalamicus lateralis") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:1347") "areas of Economo") AnnotationAssertion(Annotation( "NeuroNames:1347") "economo's areas") AnnotationAssertion(Annotation( "ZFA:0000227") Annotation( ) "lateral hypothalamic nuclei") AnnotationAssertion( "UBERON:0001937") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "lateral hypothalamic nucleus") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/8/8c/HypothalamicNuclei.PNG"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lateral mammillary nucleus) AnnotationAssertion(Annotation( "BIRNLEX:1460") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "LM") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:LM") AnnotationAssertion( "BIRNLEX:1460") AnnotationAssertion( "BTO:0004009") AnnotationAssertion( "DHBA:10502") AnnotationAssertion( "DMBA:15734") AnnotationAssertion( "EMAPA:35481") AnnotationAssertion( "EV:0100239") AnnotationAssertion( "FMA:62341") AnnotationAssertion( "HBA:4675") AnnotationAssertion( "MA:0000850") AnnotationAssertion( "MBA:210") AnnotationAssertion(Annotation( "BIRNLEX:1460") "UMLS:C0152357") AnnotationAssertion(Annotation( "BIRNLEX:1460") "UMLS:C1289570") AnnotationAssertion(Annotation( "BIRNLEX:1460") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=413") AnnotationAssertion( "lateral mammillary hypothalamic nucleus") AnnotationAssertion( "lateral nucleus of mammillary body") AnnotationAssertion(Annotation( "FMA:62341") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "nucleus mammillaris lateralis") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:413") "lateral mamillary nucleus") AnnotationAssertion(Annotation( "NeuroNames:413") "lateral mammillary nucleus (Gudden)") AnnotationAssertion(Annotation( "NeuroNames:413") Annotation( ) "nucleus corporis mamillaris lateralis") AnnotationAssertion(Annotation( "NeuroNames:413") Annotation( ) "nucleus intercalatus (Olszewski)") AnnotationAssertion(Annotation( "NeuroNames:413") Annotation( ) "nucleus lateralis corpus mamillaris") AnnotationAssertion( "UBERON:0001938") AnnotationAssertion(rdfs:label "lateral mammillary nucleus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses(Annotation( "lexical"^^xsd:string) ) # Class: (medial mammillary nucleus) AnnotationAssertion(Annotation( "BIRNLEX:1299") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "MM") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:MM") AnnotationAssertion( "BAMS:MMg") AnnotationAssertion( "BIRNLEX:1299") AnnotationAssertion( "BTO:0004008") AnnotationAssertion( "DHBA:10499") AnnotationAssertion( "DMBA:15729") AnnotationAssertion( "EMAPA:35548") AnnotationAssertion( "EV:0100238") AnnotationAssertion( "FMA:62342") AnnotationAssertion( "HBA:4672") AnnotationAssertion( "MA:0000851") AnnotationAssertion( "MBA:491") AnnotationAssertion(Annotation( "BIRNLEX:1299") "UMLS:C0175329") AnnotationAssertion(Annotation( "BIRNLEX:1299") "UMLS:C1289568") AnnotationAssertion(Annotation( "BIRNLEX:1299") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=376") AnnotationAssertion( "internal mammillary nucleus") AnnotationAssertion( "medial nucleus of mammillary body") AnnotationAssertion(Annotation( "FMA:62342") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "nucleus mammillaris medialis") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BAMS:MM") "medial mamillary nucleus") AnnotationAssertion(Annotation( "BAMS:MM") "medial mammillary nucleus, body") AnnotationAssertion(Annotation( "NeuroNames:376") "preoptic division") AnnotationAssertion( "UBERON:0001939") AnnotationAssertion(rdfs:label "medial mammillary nucleus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (supramammillary nucleus) AnnotationAssertion(Annotation( "BIRNLEX:1479") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "SuM") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:SUM") AnnotationAssertion( "BAMS:SuM") AnnotationAssertion( "BIRNLEX:1479") AnnotationAssertion( "DHBA:10497") AnnotationAssertion( "EMAPA:35842") AnnotationAssertion( "FMA:62347") AnnotationAssertion( "HBA:12911") AnnotationAssertion( "MA:0000852") AnnotationAssertion( "MBA:525") AnnotationAssertion(Annotation( "BIRNLEX:1479") "UMLS:C0228378") AnnotationAssertion(Annotation( "BIRNLEX:1479") "UMLS:C1289571") AnnotationAssertion(Annotation( "BIRNLEX:1479") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=418") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:418") Annotation( ) "nuclei premamillaris") AnnotationAssertion(Annotation( "NeuroNames:418") Annotation( ) "nucleus premamillaris hypothalami") AnnotationAssertion(Annotation( "NeuroNames:418") "premamillary nucleus") AnnotationAssertion( "UBERON:0001940") AnnotationAssertion(rdfs:label "supramammillary nucleus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lateral habenular nucleus) AnnotationAssertion(Annotation( "BIRNLEX:1438") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "LHb") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:HL") AnnotationAssertion( "BAMS:LH") AnnotationAssertion( "BAMS:LHb") AnnotationAssertion( "BIRNLEX:1438") AnnotationAssertion( "BM:Die-Epi-Hl") AnnotationAssertion( "BTO:0002699") AnnotationAssertion( "DHBA:10453") AnnotationAssertion( "EMAPA:35479") AnnotationAssertion( "FMA:62372") AnnotationAssertion( "HBA:4524") AnnotationAssertion( "MA:0000831") AnnotationAssertion( "MBA:186") AnnotationAssertion(Annotation( "BIRNLEX:1438") "UMLS:C0228390") AnnotationAssertion(Annotation( "BIRNLEX:1438") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=295") AnnotationAssertion( "lateral habenula") AnnotationAssertion(Annotation( "BIRNLEX:1438") "nucleus habenulae lateralis") AnnotationAssertion(Annotation( "BIRNLEX:1438") "nucleus habenularis lateralis") AnnotationAssertion(Annotation( "BIRNLEX:1438") "nucleus habenularis lateralis epithalami") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:295") "lateral habenula (Nissl)") AnnotationAssertion( "UBERON:0001941") AnnotationAssertion(rdfs:label "lateral habenular nucleus") SubClassOf( ) DisjointClasses(Annotation( "lexical"^^xsd:string) ) # Class: (medial habenular nucleus) AnnotationAssertion(Annotation( ) "The habenular nuclei comprise a small group of nuclei that are part of the epithalamus of the diencephalon, situated at the posterior end of the thalamus, on its upper surface. The habenular nuclei are typically divided into: lateral habenular nucleus medial habenular nucleus The pineal gland is attached to the brain in this region. Nerve impulses from the habenular nuclei are transmitted to the septal nuclei via the stria medullaris, which is found on the medial surface of the thalamus.") AnnotationAssertion(Annotation( "BIRNLEX:1431") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "MHb") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:HM") AnnotationAssertion( "BAMS:MH") AnnotationAssertion( "BAMS:MHb") AnnotationAssertion( "BIRNLEX:1431") AnnotationAssertion( "BM:Die-Epi-HM") AnnotationAssertion( "BTO:0003686") AnnotationAssertion( "DHBA:10456") AnnotationAssertion( "DMBA:16388") AnnotationAssertion( "EMAPA:35547") AnnotationAssertion( "FMA:62373") AnnotationAssertion( "HBA:4523") AnnotationAssertion( "MA:0000832") AnnotationAssertion( "MBA:483") AnnotationAssertion(Annotation( "BIRNLEX:1431") "UMLS:C0228389") AnnotationAssertion(Annotation( "BIRNLEX:1431") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=294") AnnotationAssertion( "medial habenula") AnnotationAssertion(Annotation( "BIRNLEX:1431") "nucleus habenulae medialis") AnnotationAssertion(Annotation( "BIRNLEX:1431") "nucleus habenularis medialis") AnnotationAssertion(Annotation( "BIRNLEX:1431") "nucleus habenularis medialis (Hassler)") AnnotationAssertion(Annotation( "BIRNLEX:1431") "nucleus habenularis medialis epithalami") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:294") Annotation( ) "ganglion intercrurale") AnnotationAssertion(Annotation( "NeuroNames:294") Annotation( ) "ganglion interpedunculare") AnnotationAssertion(Annotation( "NeuroNames:294") Annotation( ) "nuclei habenulares") AnnotationAssertion(Annotation( "NeuroNames:294") Annotation( ) "nucleus habenularis") AnnotationAssertion( "UBERON:0001942") AnnotationAssertion(rdfs:label "medial habenular nucleus") SubClassOf( ) # Class: (midbrain tegmentum) AnnotationAssertion(Annotation( ) Annotation( "FMA:FMA"^^xsd:string) Annotation( "ISBN:0471888893"^^xsd:string) "Ventral part of the midbrain, separated from the hindbrain by the isthmus[ISBN:0471888893]. Subdivision of the midbrain lying anterior to the tectum and posterior to the substantia nigra and cerebral peduncle[FMA] The part of the midbrain extending from the substantia nigra to the cerebral aqueduct in a horizontal section of the midbrain. It forms the floor of the midbrain that surrounds the cerebral aqueduct[WP].") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001367") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "DOI:10.1016/j.brainresbull.2005.05.001 Villar-Cheda B, Abalo XM, Anadon R, Rodicio MC, The tegmental proliferation region in the sea lamprey. Brain Research Bulletin (2005)") "Together, our results reveal a shared basic organization in the tegmental domains of the diencephalon and midbrain of developing lamprey, indicating early appearance of the domain in vertebrate phylogeny.[well established][VHOG]") AnnotationAssertion(Annotation( "BIRNLEX:1200") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "MTg") AnnotationAssertion(Annotation( "ISBN:0471888893"^^xsd:string) "tegmentum") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:MTg") AnnotationAssertion( "BIRNLEX:1200") AnnotationAssertion( "BTO:0003388") AnnotationAssertion( "DHBA:12195") AnnotationAssertion( "EFO:0000921") AnnotationAssertion( "EHDAA2:0004475") AnnotationAssertion( "EMAPA:18215") AnnotationAssertion( "FMA:62393") AnnotationAssertion( "HBA:9002") AnnotationAssertion( "MA:0000212") AnnotationAssertion( "MAT:0000452") AnnotationAssertion( "TAO:0000160") AnnotationAssertion(Annotation( "BIRNLEX:1200") "UMLS:C0039441") AnnotationAssertion( "VHOG:0001367") AnnotationAssertion( "XAO:0004271") AnnotationAssertion( "ZFA:0000160") AnnotationAssertion(Annotation( "BIRNLEX:1200") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=491") AnnotationAssertion(Annotation( ) Annotation( ) "tegmentum mesencephali") AnnotationAssertion( "tegmentum of midbrain") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "VHOG:0001367") "mesencephalic tegmentum") AnnotationAssertion(Annotation( "NeuroNames:491") Annotation( ) "tegmentum mesencephalicum") AnnotationAssertion( "UBERON:0001943") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "'tegmentum' is used generically for the ventral part of the brainstem (ISBN:0471888893). We use the label 'midbrain tegmentum' to denote the midbrain structure. In NIFSTD tegmentum is a composite structure and there is a separate class for midbrain tegmentum and pontine tegmentum") AnnotationAssertion(rdfs:label "midbrain tegmentum") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/b/b6/Gray712.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "ZFA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (pretectal region) AnnotationAssertion(Annotation( ) Annotation( "ISBN:0471888893"^^xsd:string) "Nuclear complex between dorsal thalamus and optic tectum whose nuclei receive afferents primarily from the retina and the optic tectum and are involved in modulating motor behavior in response to visual input.") AnnotationAssertion(Annotation( "MP:0009637") "A narrow, transversely oriented rostral zone of the mesencephalic tectum, bounded caudally by the superior colliculus, rostrally by the habenular trigone, and laterally by the pulvinar thalami; the pretectal area contains several nuclei that receive fibers from the optic tract; it has bilateral efferent connections with the Edinger-Westphal nucleus of the oculomotor nuclear complex by way of which it mediates the pupillary light refle[MP:0009637]x") AnnotationAssertion(Annotation( "NLX:59721") "Region of brain lying between the midbrain tectum and the thalamus (Sefton and Dreher, in Paxinos, G The rat central nervous system, 1995, pg 859), Situated at the level of poterior commissure and just rostral to the superior colliculus (Brodal, Neurological Anatomy, 3rd ed, 1981, pg 542)") AnnotationAssertion( "in monotremes, undifferentiated and possesses only a single nucleus[ISBN:0471888893]") AnnotationAssertion( "teleost fishes exhibit hypertrophy of the pretectum[ISBN:0471888893]") AnnotationAssertion( "within the amniotes, this region is smaller in mammals[ISBN:0471888893]") AnnotationAssertion( "It receives binocular sensory input from retinal ganglion cells of the eyes, and is the region responsible for maintaining the pupillary light reflex") AnnotationAssertion(Annotation( "ZFA"^^xsd:string) "part of diencephalon in ZFA - modify to adjacent here, supported by pub. Note there is some inconsistency in resources between the region vs nuclei - sometimes they are treated equivalent, sometimes separate (e.g. MP)") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:PRT") AnnotationAssertion( "BAMS:PTc") AnnotationAssertion( "BAMS:PTec") AnnotationAssertion( "BIRNLEX:703") AnnotationAssertion( "BM:MB-Tec-PT") AnnotationAssertion( "DHBA:12181") AnnotationAssertion( "DMBA:16510") AnnotationAssertion( "EMAPA:32778") AnnotationAssertion( "FMA:62402") AnnotationAssertion( "HBA:9079") AnnotationAssertion( "MA:0001062") AnnotationAssertion( "MBA:1100") AnnotationAssertion( "NLX:59721") AnnotationAssertion( "TAO:0000418") AnnotationAssertion(Annotation( "BIRNLEX:703") "UMLS:C0175354") AnnotationAssertion( "XAO:0004303") AnnotationAssertion( "ZFA:0000418") AnnotationAssertion(Annotation( "BIRNLEX:703") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=467") AnnotationAssertion(Annotation( "FMA:62402") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "area pretectalis") AnnotationAssertion(Annotation( ) "area pretectalis") AnnotationAssertion(Annotation( "FMA:62402") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "nuclei pretectales") AnnotationAssertion( "pretectal area") AnnotationAssertion( "pretectal nuclei") AnnotationAssertion( "pretectum") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:467") Annotation( ) "area praetectalis") AnnotationAssertion(Annotation( "NeuroNames:467") Annotation( ) "nucleus praetectalis") AnnotationAssertion(Annotation( "NeuroNames:467") Annotation( ) "praetectum") AnnotationAssertion(Annotation( "NeuroNames:467") Annotation( ) "regio pretectalis") AnnotationAssertion( "UBERON:0001944") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "pretectal region") SubClassOf( ) SubClassOf(Annotation( "cjm"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) SubClassOf(Annotation( "ISBN:0471888893"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (superior colliculus) AnnotationAssertion(Annotation( "BIRNLEX:1040") "Part of the midbrain tecturm consisting of paired bodies that sit caudal to the thalamus and surround the pineal gland in the mesencephalon of vertebrate brains. It comprises the rostral aspect of the midbrain, posterior to the periaqueductal gray and adjacent superior the inferior colliculus. The inferior and superior colliculi are known collectively as the corpora quadrigemina (Latin, quadruplet bodies). It consists of several identified cellular layers and also comprises the brachium of the superior colliculus and commissure of supeior colliculus from Wikipedia.org and Neuronames (MM).") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0010609") Annotation( "AAO"^^xsd:string) Annotation( ) "The brain structure where the two separate inputs from the two eyes are combined into a single, integrated map.[AAO]") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0000445") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "The roof of the midbrain, morphologically visible by the end of the segmentation period. Kimmel et al, 1995.[TAO]") AnnotationAssertion( "The tectum is a layered structure, with a number of layers that vary by species. The superficial layers are sensory-related, and receive input from the eyes as well as other sensory systems.[1] The optic tectum is one of the fundamental components of the vertebrate brain, existing across the full range of species from hagfish to human.[4] (See the brain article for background.) Some aspects of the structure are very consistent, including a structure composed of a number of layers, with a dense input from the optic nerve to the superficial layers and another strong input conveying somatosensory input to deeper layers. Other aspects are highly variable, such as the total number of layers (from 3 in the African lungfish to 15 in the goldfish[5]), and the number of different types of cells (from 2 in the lungfish to 27 in the house sparrow[5]") AnnotationAssertion( "The term SC is used when discussing mammals, and OT for other vertebrates[WP]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010609") AnnotationAssertion( "BAMS:SC") AnnotationAssertion( "BIRNLEX:1040") AnnotationAssertion( "BM:MB-Tec-SC") AnnotationAssertion( "BTO:0000965") AnnotationAssertion( "DHBA:12292") AnnotationAssertion( "DMBA:16678") AnnotationAssertion( "EFO:0002474") AnnotationAssertion( "EMAPA:32869") AnnotationAssertion( "EV:0100245") AnnotationAssertion( "FMA:62403") AnnotationAssertion( "GAID:576") AnnotationAssertion( "HBA:9114") AnnotationAssertion( "MA:0001068") AnnotationAssertion( "MESH:A08.186.211.132.659.237.816") AnnotationAssertion( "TAO:0000445") AnnotationAssertion(Annotation( "BIRNLEX:1040") "UMLS:C0228405") AnnotationAssertion( "XAO:0003226") AnnotationAssertion( "ZFA:0000445") AnnotationAssertion(Annotation( "BIRNLEX:1040") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=473") AnnotationAssertion( "anterior colliculus") AnnotationAssertion( "anterior corpus quadrigeminum") AnnotationAssertion( "cranial colliculus") AnnotationAssertion(Annotation( ) Annotation( "NCBITaxon:32443") Annotation( "NCBITaxon:7777") Annotation( "ZFA:0000445") Annotation( ) "optic tectum") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:473") Annotation( ) "colliculus bigeminalis oralis") AnnotationAssertion(Annotation( "NeuroNames:473") Annotation( ) "colliculus cranialis") AnnotationAssertion(Annotation( "NeuroNames:473") Annotation( ) "colliculus rostralis") AnnotationAssertion(Annotation( "NeuroNames:473") Annotation( ) "colliculus superior") AnnotationAssertion( "corpora bigemina") AnnotationAssertion(Annotation( "NeuroNames:473") Annotation( ) "corpus quadrigeminum superius") AnnotationAssertion( "dorsal midbrain") AnnotationAssertion(Annotation( "NeuroNames:473") "layers of the superior colliculus") AnnotationAssertion(Annotation( "BTO:0000965") "lobus opticus") AnnotationAssertion(Annotation( "NeuroNames:473") Annotation( ) "nates") AnnotationAssertion( "optic lobe") AnnotationAssertion( "optic tectum") AnnotationAssertion(Annotation( "NeuroNames:473") Annotation( ) "strata (grisea et alba) colliculi cranialis") AnnotationAssertion(Annotation( "NeuroNames:473") Annotation( ) "strata (grisea et alba) colliculi superioris") AnnotationAssertion( "tectal lobe") AnnotationAssertion( "tectum") AnnotationAssertion( "tectum opticum") AnnotationAssertion( "UBERON:0001945") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "). In hagfish, lamprey, and shark it is a relatively small structure, but in teleost fish it is greatly expanded, in some cases becoming the largest structure in the brain. (See the adjoining drawing of a codfish brain.) In amphibians, reptiles, and especially birds it is also a very significant component, but in mammals it is dwarfed by the massive expansion of the cerebral cortex.") AnnotationAssertion(rdfs:label "superior colliculus") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/d/da/Cn3nucleus.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA-abduced-lr"^^xsd:string) ObjectSomeValuesFrom( )) DisjointClasses(Annotation( "lexical"^^xsd:string) ) # Class: (inferior colliculus) AnnotationAssertion(Annotation( "BIRNLEX:806") "Part of the midbrain tectum, consisting of paired predominantly gray matter elevations on the dorsal aspect of the midbrain, located caudal to the superior colliculus, dorsal to the periaqueductal gray of the cerebral aqueduct and rostral to the cerebellum. According to Neuronames, the inferior colliculus comprises the central, pericentral and external nucleus and two predominantly white matter structures, the brachium of the inferior colliculus and the commissure of the inferior colliculus (MM).") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:IC") AnnotationAssertion( "BIRNLEX:806") AnnotationAssertion( "DHBA:12305") AnnotationAssertion( "DMBA:16692") AnnotationAssertion( "EFO:0002465") AnnotationAssertion( "EMAPA:32870") AnnotationAssertion( "EV:0100246") AnnotationAssertion( "FMA:62404") AnnotationAssertion( "GAID:575") AnnotationAssertion( "HBA:9102") AnnotationAssertion( "MA:0001067") AnnotationAssertion( "MBA:4") AnnotationAssertion( "MESH:A08.186.211.132.659.237.364") AnnotationAssertion(Annotation( "BIRNLEX:806") "UMLS:C0228411") AnnotationAssertion(Annotation( "BIRNLEX:806") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=476") AnnotationAssertion( "caudal colliculus") AnnotationAssertion(Annotation( "EV:0100246") Annotation( ) "inferior colliculi") AnnotationAssertion( "posterior colliculus") AnnotationAssertion( "posterior corpus quadrigeminum") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:476") Annotation( ) "colliculus caudalis") AnnotationAssertion(Annotation( ) Annotation( ) "colliculus inferior") AnnotationAssertion(Annotation( "NeuroNames:476") Annotation( ) "corpus bigeminalis caudalis") AnnotationAssertion(Annotation( "NeuroNames:476") Annotation( ) "corpus bigeminum posterioris") AnnotationAssertion(Annotation( "NeuroNames:476") Annotation( ) "corpus quadrigeminum inferius") AnnotationAssertion( "UBERON:0001946") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "inferior colliculus") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/2/26/Gray711.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA-abduced-lr"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (red nucleus) AnnotationAssertion(Annotation( "BIRNLEX:1478") "Large round nucleus located in the midbrain tegmentum, consisting of a magnocellular and parvicellular portion in most species studied.") AnnotationAssertion( "in animals without a significant corticospinal tract, gait is mainly controlled by the red nucleus.") AnnotationAssertion(Annotation( "BIRNLEX:1478") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "R") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:R") AnnotationAssertion( "BAMS:RN") AnnotationAssertion( "BIRNLEX:1478") AnnotationAssertion( "BM:MB-RN") AnnotationAssertion( "DHBA:12247") AnnotationAssertion( "EHDAA2:0004706") AnnotationAssertion( "EMAPA:35724") AnnotationAssertion( "EV:0100248") AnnotationAssertion( "FMA:62407") AnnotationAssertion( "GAID:586") AnnotationAssertion( "HBA:9053") AnnotationAssertion( "MA:0001063") AnnotationAssertion( "MBA:214") AnnotationAssertion( "MESH:A08.186.211.132.659.822.642") AnnotationAssertion( "TAO:0000552") AnnotationAssertion(Annotation( "BIRNLEX:1478") "UMLS:C0034910") AnnotationAssertion( "ZFA:0000552") AnnotationAssertion(Annotation( "BIRNLEX:1478") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=505") AnnotationAssertion(Annotation( "TAO:0000552") Annotation( ) "nucleus ruber") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:505") Annotation( ) "nucleus rotundus subthalamo-peduncularis") AnnotationAssertion(Annotation( ) Annotation( ) "nucleus ruber") AnnotationAssertion(Annotation( "MP:MP"^^xsd:string) Annotation( ) "nucleus ruber tegmenti") AnnotationAssertion(Annotation( "NeuroNames:505") Annotation( ) "nucleus ruber tegmenti (Stilling)") AnnotationAssertion(Annotation( "NeuroNames:505") "red nucleus (Burdach)") AnnotationAssertion( "UBERON:0001947") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "red nucleus") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/d/da/Cn3nucleus.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (regional part of spinal cord) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A multi-tissue structure that is part of a spinal cord.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:1496") AnnotationAssertion( "NCIT:C33969") AnnotationAssertion(Annotation( "ncithesaurus:Spinal_Cord_Part") "UMLS:C1268166") AnnotationAssertion( "uberon") AnnotationAssertion( "spinal cord part") AnnotationAssertion( "UBERON:0001948") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "regional part of spinal cord") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (gingival epithelium) AnnotationAssertion(Annotation( "BTO:0004998") "A stratified squamous epithelium consisting of a basal layer; it is keratinized or parakeratinized[BTO].") AnnotationAssertion( "In humans: 15% orthokeratinized, 75% parakeratinized, 10% non-keratinized; diurnal; decreased keratinization with age. Note that in FMA this is classified as keratinized squamous - this perhaps refers to the epithelium of the attached or free gingiva") AnnotationAssertion( ) AnnotationAssertion( "BTO:0004998") AnnotationAssertion( "FMA:62423") AnnotationAssertion( "MA:0001576") AnnotationAssertion( "NCIT:C49239") AnnotationAssertion(Annotation( "ncithesaurus:Gingival_Epithelium") "UMLS:C1179154") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelial tissue of gingiva") AnnotationAssertion( "epithelium of gingiva") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "gingiva epithelial tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "gingiva epithelium") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001949") AnnotationAssertion(rdfs:label "gingival epithelium") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (neocortex) AnnotationAssertion(Annotation( "BIRNLEX:2547") Annotation( "OldNeuroNames:754") "An area of cerebral cortex defined on the basis of cytoarchitecture that have six layers. Starting from the cortical surface the layers are: molecular layer (I), external granular layer (II), external pyramidal layer (III), internal granular layer (IV), internal pyramidal layer (V), and multiform layer (VI). Neocortex is most prominent in the frontal lobe, the parietal lobe, the temporal lobe and the occipital lobe, less so in the cingulate gyrus, the parahippocampal gyrus and the insula. It is composed of two subdivisions: true isocortex and proisocortex (Carpenter-83)(NN).") AnnotationAssertion(Annotation( ) "The 6-layer neocortex is well conserved in all extant mammals, but not present in birds or reptils") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:ISO") AnnotationAssertion( "BAMS:Iso-cortex") AnnotationAssertion( "BAMS:NCX") AnnotationAssertion( "BIRNLEX:2547") AnnotationAssertion( "BTO:0000920") AnnotationAssertion( "DHBA:10160") AnnotationAssertion( "EHDAA2:0004662") AnnotationAssertion( "EMAPA:32842") AnnotationAssertion( "EMAPA:35589") AnnotationAssertion( "FMA:62429") AnnotationAssertion( "GAID:677") AnnotationAssertion( "MA:0002754") AnnotationAssertion( "MBA:315") AnnotationAssertion( "MESH:A08.186.211.730.885.213.420") AnnotationAssertion( "PBA:294021746") AnnotationAssertion(Annotation( "BIRNLEX:2547") "UMLS:C0175173") AnnotationAssertion(Annotation( "BIRNLEX:2547") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=757") AnnotationAssertion( "cerebral neocortex") AnnotationAssertion(Annotation( "ISBN:0471888893"^^xsd:string) Annotation( ) "homogenetic cortex") AnnotationAssertion(Annotation( "BIRNLEX:2547") "homotypical cortex") AnnotationAssertion(Annotation( "FMA:62429") "isocortex (sensu lato)") AnnotationAssertion(Annotation( "DHBA:10160") "neocortex (isocortex)") AnnotationAssertion( "neopallial cortex") AnnotationAssertion( "neopallium") AnnotationAssertion(Annotation( "BRAINSPAN:BRAINSPAN") "isocortex") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BAMS:iso-cortex") "iso-cortex") AnnotationAssertion(Annotation( "BTO:0000920") "nonolfactory cortex") AnnotationAssertion(Annotation( "NeuroNames:757") Annotation( ) "nucleus hypoglossalis") AnnotationAssertion( "UBERON:0001950") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "neocortex") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/7/77/Neocortex.jpg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (epithelium of nasopharynx) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An epithelium that is part of a nasopharynx [Automatically generated definition].") AnnotationAssertion( "UBERON:0003237") AnnotationAssertion( ) AnnotationAssertion( "BTO:0004480") AnnotationAssertion( "CALOHA:TS-0662") AnnotationAssertion( "EHDAA2:0001241") AnnotationAssertion( "EHDAA:7090") AnnotationAssertion( "EMAPA:17672") AnnotationAssertion( "FMA:62452") AnnotationAssertion( "MA:0001865") AnnotationAssertion( "NCIT:C49263") AnnotationAssertion(Annotation( "ncithesaurus:Nasopharynx_Epithelium") "UMLS:C1179157") AnnotationAssertion( "VHOG:0001038") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelial tissue of nasal part of pharynx") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelial tissue of nasopharynx") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelial tissue of rhinopharynx") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelium of nasal part of pharynx") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelium of rhinopharynx") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "nasal part of pharynx epithelial tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "nasal part of pharynx epithelium") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "nasopharynx epithelial tissue") AnnotationAssertion( "nasopharynx epithelium") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "rhinopharynx epithelial tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "rhinopharynx epithelium") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0004480") "nasopharyngeal epithelium") AnnotationAssertion( "UBERON:0001951") AnnotationAssertion(rdfs:label "epithelium of nasopharynx") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (epithelium of oropharynx) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An epithelium that is part of a oropharynx [Automatically generated definition].") AnnotationAssertion(Annotation( "FMA"^^xsd:string) "Composition varies with species and time. This is classified as nonkeratinizing stratified squamous in FMA, unilaminar in EHDAA2; the majority of the pharyngeal epithelium is unilaminar in zebrafish") AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0004083") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37705") AnnotationAssertion( "FMA:62453") AnnotationAssertion( "MA:0001605") AnnotationAssertion( "NCIT:C49264") AnnotationAssertion(Annotation( "ncithesaurus:Oropharynx_Epithelium") "UMLS:C1179158") AnnotationAssertion( "oropharyngeal epithelium") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "oropharynx epithelial tissue") AnnotationAssertion(Annotation( "MA:0001605") "oropharynx epithelium") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001952") AnnotationAssertion(rdfs:label "epithelium of oropharynx") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (presubiculum) AnnotationAssertion(Annotation( ) "A modified six-layered cortex between the subiculum and the main part of the parahippocampal gyrus.") AnnotationAssertion( "consider merging with BA27") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:PRE") AnnotationAssertion( "BAMS:PRS") AnnotationAssertion( "BAMS:PrS") AnnotationAssertion( "BIRNLEX:1108") AnnotationAssertion( "BM:Tel-Cx-PSB") AnnotationAssertion( "DHBA:10315") AnnotationAssertion( "DMBA:16172") AnnotationAssertion( "EMAPA:35703") AnnotationAssertion( "FMA:62486") AnnotationAssertion( "HBA:4252") AnnotationAssertion( "MA:0000923") AnnotationAssertion( "MBA:1084") AnnotationAssertion(Annotation( "BIRNLEX:1108") "UMLS:C0175194") AnnotationAssertion(Annotation( "BIRNLEX:1108") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=167") AnnotationAssertion(Annotation( "DHBA:10315") "presubicular cortex (presubiculum)") AnnotationAssertion(Annotation( "BIRNLEX:1108") "presubiculum (Cajal)") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:62486") Annotation( ) "area 27 of Brodmann") AnnotationAssertion(Annotation( "NeuroNames:167") Annotation( ) "praesubiculum") AnnotationAssertion( "UBERON:0001953") AnnotationAssertion(rdfs:label "presubiculum") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/5/5f/Brodmann_Cytoarchitectonics_27.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "NIFSTD"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (Ammon's horn) AnnotationAssertion(Annotation( "BIRNLEX:721") "A part of the brain consisting of a three layered cortex located in the forebrain bordering the medial surface of the lateral ventricle. The term hippocampus is often used synonymously with hippocampal formation which consists of the hippocampus proper or Cornu Ammonis, the dentate gyrus and the subiculum.") AnnotationAssertion( "hippocampal") AnnotationAssertion( "Non-mammalian species do not have a brain structure that looks like the mammalian hippocampus, but they have one that is considered homologous to it. The hippocampus, as pointed out above, is essentially the medial edge of the cortex. Only mammals have a fully developed cortex, but the structure it evolved from, called the pallium, is present in all vertebrates, even the most primitive ones such as the lamprey or hagfish. The pallium is usually divided into three zones: medial, lateral, and dorsal. The medial pallium forms the precursor of the hippocampus. It does not resemble the hippocampus visually, because the layers are not warped into an S shape or enwrapped by the dentate gyrus, but the homology is indicated by strong chemical and functional affinities. There is now evidence that these hippocampal-like structures are involved in spatial cognition in birds, reptiles, and fish. In birds, the correspondence is sufficiently well established that most anatomists refer to the medial pallial zone as the 'avian hippocampus'. The story for fish is more complex. In teleost fish (which make up the great majority of existing species), the forebrain is distorted in comparison to other types of vertebrates: most neuroanatomists believe that the teleost forebrain is essentially everted, like a sock turned inside-out, so that structures that lie in the interior, next to the ventricles, for most vertebrates, are found on the outside in teleost fish, and vice versa. One of the consequences of this is that the medial pallium ('hippocampal' zone) of a typical vertebrate is thought to correspond to the lateral pallium of a typical fish. Several types of fish (particularly goldfish) have been shown experimentally to have strong spatial memory abilities, even forming 'cognitive maps' of the areas they inhabit.[WP]") AnnotationAssertion( "UBERON:0003940") AnnotationAssertion( "UBERON:0004165") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:CA") AnnotationAssertion( "BIRNLEX:721") AnnotationAssertion( "BM:Tel-CAM") AnnotationAssertion( "BTO:0003705") AnnotationAssertion( "CALOHA:TS-0460") AnnotationAssertion( "DHBA:10296") AnnotationAssertion( "DMBA:16124") AnnotationAssertion( "EFO:0000530") AnnotationAssertion( "EHDAA2:0004443") AnnotationAssertion( "EMAPA:32772") AnnotationAssertion( "EMAPA:32845") AnnotationAssertion( "EV:0100180") AnnotationAssertion( "FMA:62493") AnnotationAssertion( "GAID:623") AnnotationAssertion( "MA:0000191") AnnotationAssertion( "MAT:0000114") AnnotationAssertion( "MBA:375") AnnotationAssertion( "MESH:A08.186.211.577.405") AnnotationAssertion( "MIAA:0000114") AnnotationAssertion( "NCIT:C12444") AnnotationAssertion( "NCIT:C32374") AnnotationAssertion( "OpenCyc:Mx4rv3piFJwpEbGdrcN5Y29ycA") AnnotationAssertion( "PBA:128012244") AnnotationAssertion(Annotation( "BIRNLEX:721") "UMLS:C0019564") AnnotationAssertion(Annotation( "ncithesaurus:Hippocampus") "UMLS:C0019564") AnnotationAssertion( "VHOG:0001177") AnnotationAssertion(Annotation( "GO:0021541") "Ammon's horn") AnnotationAssertion(Annotation( "GO:0021541") "ammon gyrus") AnnotationAssertion(Annotation( "BIRNLEX:721") "ammon horn") AnnotationAssertion( "hippocampus major") AnnotationAssertion(Annotation( "BIRNLEX:721") "hippocampus proper") AnnotationAssertion(Annotation( "FMA:62493") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "hippocampus proprius") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BAMS:CA") "Ammon horn fields") AnnotationAssertion(Annotation( "BTO:0003705") "Ammons horn") AnnotationAssertion(Annotation( "GO:0021541") "cornu ammonis") AnnotationAssertion(Annotation( "MA:0000191") "hippocampus") AnnotationAssertion( "UBERON:0001954") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "Ammon's horn") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/2/2e/Gray739-emphasizing-hippocampus.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "ABA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (epithelium of respiratory bronchiole) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An epithelium that is part of a respiratory bronchiole [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:35730") AnnotationAssertion( "FMA:62498") AnnotationAssertion( "MA:0001773") AnnotationAssertion( "NCIT:C48943") AnnotationAssertion(Annotation( "ncithesaurus:Respiratory_Bronchiole_Epithelium") "UMLS:C1179179") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bronchiolus respiratorius epithelial tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bronchiolus respiratorius epithelium") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelial tissue of bronchiolus respiratorius") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelial tissue of respiratory bronchiole") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelium of bronchiolus respiratorius") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "respiratory bronchiole epithelial tissue") AnnotationAssertion( "respiratory bronchiole epithelium") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001955") AnnotationAssertion(rdfs:label "epithelium of respiratory bronchiole") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (cartilage of bronchus) AnnotationAssertion(Annotation( "MP:0010988") "The hyaline cartilaginous structures that support the bronchi, present as irregular rings in the larger bronchi (and not as regular as in the trachea), and as small plates and islands in the smaller bronchi; as the branching continues through the bronchial tree, the amount of hyaline cartilage in the walls decreases until it is absent in the smallest bronchioles[MP].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:35192") AnnotationAssertion( "FMA:62649") AnnotationAssertion( "MA:0001835") AnnotationAssertion( "NCIT:C49209") AnnotationAssertion(Annotation( "ncithesaurus:Bronchus_Cartilage") "UMLS:C0225604") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bronchi cartilage") AnnotationAssertion( "bronchial cartilage") AnnotationAssertion(Annotation( "MP:0010988") "bronchial cartilage ring") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bronchial trunk cartilage") AnnotationAssertion( "bronchus cartilage") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "cartilage of bronchi") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "cartilage of bronchial trunk") AnnotationAssertion(Annotation( ) "cartilagines bronchiales") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001956") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "cartilage of bronchus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "MP"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (submucosa of bronchus) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A submucosa that is part of a bronchus [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0002108") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37449") AnnotationAssertion( "FMA:62653") AnnotationAssertion( "MA:0001837") AnnotationAssertion( "NCIT:C49214") AnnotationAssertion(Annotation( "ncithesaurus:Bronchus_Submucosa") "UMLS:C0225601") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bronchi submucosa") AnnotationAssertion( "bronchial submucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bronchial trunk submucosa") AnnotationAssertion( "bronchus submucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "submucosa of bronchi") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "submucosa of bronchial trunk") AnnotationAssertion(Annotation( "FMA:62653") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "tela submucosa bronchi") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0002108") "submucous layer of bronchi") AnnotationAssertion( "UBERON:0001957") AnnotationAssertion(rdfs:label "submucosa of bronchus") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (terminal bronchiole epithelium) AnnotationAssertion(Annotation( ) "An epithelium that lines a terminal bronchiole.") AnnotationAssertion( "A pseudostratified epithelium, containing basal cells, stem cells of the airway, submucosal glands and cartilage rings, is limited to the trachea and large lobar airways in the mouse (Morrisey and Hogan, 2010). This more complex epithelium extends to terminal bronchioles in the human[DOI:10.1242/dev.115469]") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:36283") AnnotationAssertion( "FMA:62794") AnnotationAssertion( "MA:0001774") AnnotationAssertion( "NCIT:C33755") AnnotationAssertion(Annotation( "ncithesaurus:Terminal_Bronchiole_Epithelium") "UMLS:C1179400") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bronchiolus terminalis epithelial tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bronchiolus terminalis epithelium") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelial tissue of bronchiolus terminalis") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelial tissue of terminal bronchiole") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelium of bronchiolus terminalis") AnnotationAssertion(Annotation( "FMA:62794") "epithelium of terminal bronchiole") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "terminal bronchiole epithelial tissue") AnnotationAssertion( "terminal bronchiole epithelium") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001958") AnnotationAssertion(rdfs:label "terminal bronchiole epithelium") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (white pulp of spleen) AnnotationAssertion(Annotation( "MGI:csmith"^^xsd:string) Annotation( "MP:0002357") "The parenchymatous tissue of the spleen that surrounds splenic blood vessels, consists of compact masses of lymphatic cells and is where foreign material removed from the blood is used to initiate an immune reaction that results in the production of antibodies.") AnnotationAssertion( "The white pulp contains T cells, B cells and accessory cells. The function of the white pulp is to mount an immunological response to antigens within the blood. The white pulp is present in the form of a periarteriolar lymphoid sheath. This sheath contains B cell follicles and T cells. At the edge of the T zone is a region known as the marginal zone where larger lymphocytes and antigen presenting dendritic cells are located. [Wikipedia:White_pulp]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "CALOHA:TS-1264") AnnotationAssertion( "EMAPA:35809") AnnotationAssertion( "FMA:62805") AnnotationAssertion( "MA:0000762") AnnotationAssertion( "NCIT:C12993") AnnotationAssertion(Annotation( "ncithesaurus:Splenic_White_Pulp") "UMLS:C0229686") AnnotationAssertion(Annotation( "FMA:62805") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "pulpa alba") AnnotationAssertion( "spleen white pulp") AnnotationAssertion( "splenic white pulp") AnnotationAssertion( "white pulp") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "noduli lymphoidei splenici") AnnotationAssertion( "UBERON:0001959") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "white pulp of spleen") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/1/15/Gray1191.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (periarterial lymphatic sheath) AnnotationAssertion(Annotation( "MP:0002358") "The area of the spleen in which T cells surround the central arteriole.") AnnotationAssertion(Annotation( "FMA"^^xsd:string) "FMA distinguishes periarterial (PALS) from periarteriolar (FMA:62806)") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37750") AnnotationAssertion( "FMA:62810") AnnotationAssertion( "MA:0000765") AnnotationAssertion(Annotation( "MP:0002358") Annotation( ) "PALS") AnnotationAssertion(Annotation( "MP:0002358") "T cell domain of the splenic white pulp") AnnotationAssertion( "periarterial lymphoid sheath") AnnotationAssertion(Annotation( "MP:0002358") "periarteriolar sheath") AnnotationAssertion( "spleen periarteriolar lymphatic sheath") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "MP:0002358") "splenic periarteriolar lymphoid sheath") AnnotationAssertion( "UBERON:0001960") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "periarterial lymphatic sheath") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (mucosa-associated lymphoid tissue) AnnotationAssertion(Annotation( ) "Diffuse system of small concentrations of lymphoid tissue found in various sites of the body such as the gastrointestinal tract, thyroid, breast, lung, salivary glands, eye, and skin[WP]. Mucosal-associated lymphoid tissue is typically found as nodules associated with mucosal epithelia with distinct internal structures including B- and T-zones for the activation of lymphocytes[GO].") AnnotationAssertion( "todo - add part relationships to specific layers") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:62819") AnnotationAssertion( "MA:0000140") AnnotationAssertion( "NCIT:C12910") AnnotationAssertion(Annotation( "ncithesaurus:Mucosa-Associated_Lymphoid_Tissue") "UMLS:C0599921") AnnotationAssertion( "MALT") AnnotationAssertion(Annotation( "FMA:62819") "epithelio-lymphoid tissue") AnnotationAssertion( "mucosa associated lymphatic tissue") AnnotationAssertion( "mucosa associated lymphoid tissue") AnnotationAssertion(Annotation( "GO:0048537") "mucosa-associated lymphoid tissue") AnnotationAssertion(Annotation( "GO:0048537") "mucosal-associated lymphatic tissue") AnnotationAssertion(Annotation( "GO:0048537") "mucosal-associated lymphoid tissue") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001961") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "mucosa-associated lymphoid tissue") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) # Class: (gut-associated lymphoid tissue) AnnotationAssertion(Annotation( ) "Mucosa-associated lymphoid tissue in digestive tract. includes Peyer's patches, appendix, and solitary lymph nodules[GO].") AnnotationAssertion( "phylogenetic relationships to be added") AnnotationAssertion( "guts of jawless fish contains cells with lymphocyte-like morphology (Mayer 2002).") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:62820") AnnotationAssertion( "MA:0000136") AnnotationAssertion( "NCIT:C12936") AnnotationAssertion(Annotation( "ncithesaurus:Gut_Associated_Lymphoid_Tissue") "UMLS:C0596638") AnnotationAssertion( "gut associated lymphoid tissue") AnnotationAssertion( "uberon") AnnotationAssertion( "GALT") AnnotationAssertion( "UBERON:0001962") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "gut-associated lymphoid tissue") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (bronchial-associated lymphoid tissue) AnnotationAssertion(Annotation( "ISBN:0123813611"^^xsd:string) "A diffuse collection of lymphpoid cells that participate in airway immune responses.") AnnotationAssertion( ) AnnotationAssertion( "FMA:62821") AnnotationAssertion( "MA:0000135") AnnotationAssertion( "NCIT:C32234") AnnotationAssertion(Annotation( "ncithesaurus:Bronchus-Associated_Lymphoid_Tissue") "UMLS:C1179418") AnnotationAssertion( "bronchus associated lymphoid tissue") AnnotationAssertion( "uberon") AnnotationAssertion( "BALT") AnnotationAssertion( "UBERON:0001963") AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "Lymphoid tissue associated with airways in mice has functional similarities to human BALT[ISBN:0123813611] Notes: FMA classifies this as organized, not diffuse") AnnotationAssertion(rdfs:label "bronchial-associated lymphoid tissue") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "ISBN:0123813611"^^xsd:string) ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) # Class: (least splanchnic nerve) AnnotationAssertion(Annotation( ) "A thoracic nerve that nerve travels into the abdomen, where its fibers synapse in the renal ganglia.") AnnotationAssertion(Annotation( "MA"^^xsd:string) "in MA this is part of the kidney but this leads to unsatisfiability") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:29691") AnnotationAssertion( "FMA:6283") AnnotationAssertion( "MA:0002635") AnnotationAssertion(Annotation( "FMA:6283") "least thoracic splanchnic nerve") AnnotationAssertion(Annotation( "FMA:6283") "lowest splanchnic nerve") AnnotationAssertion(Annotation( "FMA:6283") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "nervus splanchnicus imus") AnnotationAssertion(Annotation( "FMA:6283") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "ramus renalis nervus splanchnici minoris") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) "ramus renalis nervus splanchnici minoris") AnnotationAssertion(Annotation( "FMA:6283") "renal branch of lesser splanchnic nerve") AnnotationAssertion(Annotation( "FMA:6283") "renal nerve") AnnotationAssertion( "uberon") AnnotationAssertion( "thoracic splanchnic nerve") AnnotationAssertion( "UBERON:0001964") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "least splanchnic nerve") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/7/77/Gray838.png"^^xsd:anyURI) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (substantia nigra pars compacta) AnnotationAssertion(Annotation( "BIRNLEX:990") "Regional part of substantia nigra consisting of a densely packed region of cells, more or less dorsal to the pars reticulata, but extending into the pars reticulata in some species. The dominant neurotransmitter used by pars compacta neurons is dopamine. Pars compacta neurons are pigmented in many species (MM).") AnnotationAssertion(Annotation( "BIRNLEX:990") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "SNC") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:SNC") AnnotationAssertion( "BAMS:SNc") AnnotationAssertion( "BIRNLEX:990") AnnotationAssertion( "BM:MB-SNc") AnnotationAssertion( "BTO:0003749") AnnotationAssertion( "DHBA:12252") AnnotationAssertion( "EMAPA:35836") AnnotationAssertion( "FMA:62907") AnnotationAssertion( "HBA:9074") AnnotationAssertion( "MA:0001064") AnnotationAssertion( "MBA:374") AnnotationAssertion( "NCIT:C97341") AnnotationAssertion(Annotation( "BIRNLEX:990") "UMLS:C0175412") AnnotationAssertion(Annotation( "ncithesaurus:Pars_Compacta") "UMLS:C0175412") AnnotationAssertion(Annotation( "BIRNLEX:990") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=537") AnnotationAssertion( "SNpc") AnnotationAssertion( "compact part of substantia nigra") AnnotationAssertion( "pars compacta") AnnotationAssertion(Annotation( "FMA:62907") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "pars compacta substantiae nigrae") AnnotationAssertion(Annotation( "BIRNLEX:990") "substantia nigra compact part") AnnotationAssertion(Annotation( "BIRNLEX:990") "substantia nigra compacta") AnnotationAssertion( "substantia nigra, compact part") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:537") Annotation( ) "nucleus substantiae nigrae, pars compacta") AnnotationAssertion(Annotation( "NeuroNames:537") "pars compacta of substantia nigra") AnnotationAssertion(Annotation( "BAMS:SNC") "substantia nigra, compact division") AnnotationAssertion(Annotation( "NeuroNames:537") Annotation( ) "substantia nigra, pars compacta") AnnotationAssertion( "UBERON:0001965") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "substantia nigra pars compacta") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (substantia nigra pars reticulata) AnnotationAssertion(Annotation( "BIRNLEX:968") "Regional part of substantia nigra consisting of loosely packed cells, generally located ventral and lateral to the pars compacta. Many cells in this region use GABA as a neurotransmitter (MM).") AnnotationAssertion(Annotation( "MP:0000836") Annotation( ) "SNPR") AnnotationAssertion(Annotation( "BIRNLEX:968") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "SNR") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:SNR") AnnotationAssertion( "BAMS:SNr") AnnotationAssertion( "BIRNLEX:968") AnnotationAssertion( "BM:MB-SNr") AnnotationAssertion( "BTO:0003750") AnnotationAssertion( "DHBA:12259") AnnotationAssertion( "EMAPA:35838") AnnotationAssertion( "FMA:62908") AnnotationAssertion( "HBA:9075") AnnotationAssertion( "MA:0001066") AnnotationAssertion( "MBA:381") AnnotationAssertion(Annotation( "BIRNLEX:968") "UMLS:C0175413") AnnotationAssertion(Annotation( "BIRNLEX:968") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=537") AnnotationAssertion(Annotation( "FMA:62908") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "nucleus substantiae nigrae, pars reticularis") AnnotationAssertion(Annotation( "FMA:62908") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "pars reticularis") AnnotationAssertion(Annotation( "FMA:62908") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "pars reticularis substantiae nigrae") AnnotationAssertion( "pars reticulata") AnnotationAssertion( "reticular part of substantia nigra") AnnotationAssertion(Annotation( "FMA:62908") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "substantia nigra, pars diffusa") AnnotationAssertion( "substantia nigra, reticular part") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:537") Annotation( ) "nucleus substantiae nigrae, pars compacta") AnnotationAssertion(Annotation( "NeuroNames:537") "pars compacta of substantia nigra") AnnotationAssertion(Annotation( "BAMS:SNR") "substantia nigra reticular part") AnnotationAssertion(Annotation( "BAMS:SNr") "substantia nigra reticular part") AnnotationAssertion(Annotation( "NeuroNames:537") Annotation( ) "substantia nigra, pars compacta") AnnotationAssertion(Annotation( "BAMS:SNR") "substantia nigra, pars reticulata") AnnotationAssertion(Annotation( "BAMS:SNR") "substantia nigra, reticular division") AnnotationAssertion( "UBERON:0001966") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "the cells of pars reticulata bear a strong structural and functional resemblance to the inner segment of the globus pallidus") AnnotationAssertion(rdfs:label "substantia nigra pars reticulata") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (reticular lamina of epithelium) AnnotationAssertion(Annotation( ) "A thin extracellular layer that sometimes lies below the basal lamina, is composed chiefly of collagenous fibers, and serves to anchor the basal lamina to underlying connective tissue.") AnnotationAssertion( "this class represents a continuous sheet of reticular lamina which can underlie multiple epithelial cells over large regions. In contrast, the GO class 'lamina reticularis' represents a portion of substance on the scale of a single cell.") AnnotationAssertion( ) AnnotationAssertion( "FMA:62924") AnnotationAssertion(Annotation( "FMA:62924") "fibroreticular lamina") AnnotationAssertion(Annotation( "FMA:62924") Annotation( ) "lamina fibroreticularis") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "GO:0008004") "lamina reticularis") AnnotationAssertion(Annotation( "FMA:62924") "reticular lamina") AnnotationAssertion( "reticular membrane") AnnotationAssertion( "UBERON:0001967") AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "See https://github.com/obophenotype/uberon/issues/1436") AnnotationAssertion(rdfs:label "reticular lamina of epithelium") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (semen) AnnotationAssertion(Annotation( ) "Organism substance that is composed of sperm cells suspended in seminal fluid.") AnnotationAssertion( "seminal") AnnotationAssertion( "Note that in this ontology, semen is defined as the sum of sperm and seminal fluid, where seminal fluid is defined in taxonomically generic way (see comments for UBERON:0006530).") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0001230") AnnotationAssertion( "CALOHA:TS-0917") AnnotationAssertion( "EMAPA:31488") AnnotationAssertion( "FMA:62966") AnnotationAssertion( "GAID:1169") AnnotationAssertion( "MA:0002522") AnnotationAssertion( "MESH:D012661") AnnotationAssertion( "NCIT:C13277") AnnotationAssertion( "NCIT:C13713") AnnotationAssertion( "OpenCyc:Mx4rvgC-zpwpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Male_Genital_System_Fluid_or_Secretion") "UMLS:C1518159") AnnotationAssertion(Annotation( "ncithesaurus:Semen") "UMLS:C2756969") AnnotationAssertion( "uberon") AnnotationAssertion( "ejaculate") AnnotationAssertion(Annotation( "BTO:0001230") "sperm") AnnotationAssertion( "UBERON:0001968") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "semen") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/4/40/Human_semen_in_petri_dish2.jpg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (blood plasma) AnnotationAssertion(Annotation( ) "The liquid component of blood, in which erythrocytes are suspended.") AnnotationAssertion(Annotation( "MA:0002501") "plasma") AnnotationAssertion(Annotation( "FMA:62970") "portion of plasma") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0000131") AnnotationAssertion( "CALOHA:TS-0800") AnnotationAssertion( "EFO:0001905") AnnotationAssertion( "EMAPA:35690") AnnotationAssertion( "FMA:62970") AnnotationAssertion( "GAID:1178") AnnotationAssertion( "MA:0002501") AnnotationAssertion( "MAT:0000052") AnnotationAssertion( "MESH:D010949") AnnotationAssertion( "MIAA:0000052") AnnotationAssertion( "NCIT:C13356") AnnotationAssertion( "OpenCyc:Mx4rEg4ZYrIbEduAAAAOpmP6tw") AnnotationAssertion(Annotation( "ncithesaurus:Plasma") "UMLS:C0032105") AnnotationAssertion( "blood plasm") AnnotationAssertion( "portion of blood plasma") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001969") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "blood plasma") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (bile) AnnotationAssertion(Annotation( ) Annotation( ) "Vital aqueous secretion of the liver that is formed by hepatocytes and modified down stream by absorptive and secretory properties of the bile duct epithelium.") AnnotationAssertion( "In many species, bile is stored in the gallbladder and upon eating is discharged into the duodenum.") AnnotationAssertion( "aids the process of digestion of lipids in the small intestine") AnnotationAssertion( "bile salts function to emulsify dietary fats and facilitate their intestinal absorption") AnnotationAssertion( "elimination of cholesterol") AnnotationAssertion( "major excretory route for potentially harmful exogenous lipophilic substances") AnnotationAssertion( "many hormones and pheromones are excreted in bile, and contribute to growth and development of the intestine in some species and provide attractants for the weaning of non-human vertebrates") AnnotationAssertion( "protects the organism from enteric infections by excreting immune globulin A (IgA), inflammatory cytokines, and stimulating the innate immune system in the intestine") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0000121") AnnotationAssertion( "CALOHA:TS-1172") AnnotationAssertion( "ENVO:02000023") AnnotationAssertion( "FMA:62971") AnnotationAssertion( "GAID:1157") AnnotationAssertion( "MA:0002513") AnnotationAssertion( "MESH:D001646") AnnotationAssertion( "NCIT:C13192") AnnotationAssertion(Annotation( "ncithesaurus:Bile") "UMLS:C0005388") AnnotationAssertion( "ZFA:0005857") AnnotationAssertion( "galen:Bile") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0000121") "fel") AnnotationAssertion(Annotation( "BTO:0000121") "gall") AnnotationAssertion( "UBERON:0001970") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "bile") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (gastric juice) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0000501") AnnotationAssertion( "FMA:62972") AnnotationAssertion( "GAID:1160") AnnotationAssertion( "MA:0002519") AnnotationAssertion( "MESH:D005750") AnnotationAssertion( "NCIT:C32661") AnnotationAssertion(Annotation( "ncithesaurus:Gastric_Secretion") "UMLS:C0017133") AnnotationAssertion( "galen:GastricJuice") AnnotationAssertion( "stomach secretion") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0000501") "succus gastricus") AnnotationAssertion( "UBERON:0001971") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "gastric juice") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (submucosa of esophagus) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A submucosa that is part of a esophagus [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( "BTO:0002109") AnnotationAssertion( "EMAPA:35325") AnnotationAssertion( "FMA:62997") AnnotationAssertion( "MA:0002724") AnnotationAssertion( "esophageal submucosa") AnnotationAssertion( "esophagus submucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "gullet submucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "oesophagus submucosa") AnnotationAssertion( "submucosa of esophagus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "submucosa of gullet") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "submucosa of oesophagus") AnnotationAssertion(Annotation( "FMA:62997") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "tela submucosa (oesophagus)") AnnotationAssertion(Annotation( "BTO:0002109") Annotation( ) "tela submucosa esophagi") AnnotationAssertion(Annotation( "FMA:62997") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "tela submucosa oesophageae") AnnotationAssertion( "tela submucosa of esophagus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0002109") "submucous layer of esophagus") AnnotationAssertion(Annotation( "BTO:0002109") "tela submucosa oesophagi") AnnotationAssertion( "UBERON:0001972") AnnotationAssertion(rdfs:label "submucosa of esophagus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (lamina propria of esophagus) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A lamina propria that is part of a esophagus [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:26987") AnnotationAssertion( "FMA:63050") AnnotationAssertion( "MA:0001568") AnnotationAssertion( "NCIT:C49223") AnnotationAssertion(Annotation( "ncithesaurus:Esophageal_Lamina_Propria") "UMLS:C1707949") AnnotationAssertion( "esophagus lamina propria") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "esophagus lamina propria mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "esophagus lamina propria mucosae") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "gullet lamina propria") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "gullet lamina propria mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "gullet lamina propria mucosae") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "lamina propria mucosa of esophagus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "lamina propria mucosa of gullet") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "lamina propria mucosa of oesophagus") AnnotationAssertion( "lamina propria mucosae of esophagus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "lamina propria mucosae of gullet") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "lamina propria mucosae of oesophagus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "lamina propria of gullet") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "lamina propria of oesophagus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "oesophagus lamina propria mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "oesophagus lamina propria mucosae") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "EMAPA:26987") "esophageal lamina propria") AnnotationAssertion( "oesophagus lamina propria") AnnotationAssertion( "UBERON:0001974") AnnotationAssertion(rdfs:label "lamina propria of esophagus") SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (serosa of esophagus) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A serous membrane that is part of a esophagus [Automatically generated definition].") AnnotationAssertion( "EMAPA:35322") AnnotationAssertion( "FMA:63057") AnnotationAssertion( "MA:0001571") AnnotationAssertion( "esophagus serosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "esophagus serous membrane") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "gullet serosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "gullet serous membrane") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "oesophagus serous membrane") AnnotationAssertion( "serosa of abdominal part of esophagus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "serosa of gullet") AnnotationAssertion( "serosa of oesophagus") AnnotationAssertion( "serous coat of oesophagus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "serous membrane of esophagus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "serous membrane of gullet") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "serous membrane of oesophagus") AnnotationAssertion(Annotation( "FMA:63057") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "tunica serosa oesophageae") AnnotationAssertion( "uberon") AnnotationAssertion( "oesophagus serosa") AnnotationAssertion( "UBERON:0001975") AnnotationAssertion(rdfs:label "serosa of esophagus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (epithelium of esophagus) AnnotationAssertion(Annotation( "ISBN:0-683-40008-8"^^xsd:string) Annotation( "MP:0000468") "The epithelial layer that lines the luminal space of the esophagus.") AnnotationAssertion( "TODO check epithelium types: in FMA: Nonkeratinizing stratified squamous epithelium; mouse has basal and squamous subtypes; in ZFA it is columnar") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0001499") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "Simple columnar epithelium that lines the esophagus. Chen et al, 2007.[TAO]") AnnotationAssertion( ) AnnotationAssertion( "BTO:0001578") AnnotationAssertion( "CALOHA:TS-0698") AnnotationAssertion( "EFO:0003041") AnnotationAssertion( "EHDAA2:0001287") AnnotationAssertion( "EMAPA:16835") AnnotationAssertion( "FMA:63063") AnnotationAssertion( "MA:0001565") AnnotationAssertion( "NCIT:C49221") AnnotationAssertion( "TAO:0001499") AnnotationAssertion(Annotation( "ncithesaurus:Esophageal_Epithelium") "UMLS:C1179544") AnnotationAssertion( "ZFA:0001499") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelial tissue of esophagus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelial tissue of gullet") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelial tissue of oesophagus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelium of gullet") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelium of oesophagus") AnnotationAssertion( "esophageal epithelium") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "esophagus epithelial tissue") AnnotationAssertion( "esophagus epithelium") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "gullet epithelial tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "gullet epithelium") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "oesophagus epithelial tissue") AnnotationAssertion( "uberon") AnnotationAssertion( "oesophagus epithelium") AnnotationAssertion( "UBERON:0001976") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "epithelium of esophagus") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (blood serum) AnnotationAssertion(Annotation( ) Annotation( ) "The portion of blood plasma that excludes clotting factors.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0000133") AnnotationAssertion( "BTO:0001239") AnnotationAssertion( "CALOHA:TS-0923") AnnotationAssertion( "EHDAA2:0004728") AnnotationAssertion( "EMAPA:35770") AnnotationAssertion( "FMA:63083") AnnotationAssertion( "MA:0002502") AnnotationAssertion( "NCIT:C13325") AnnotationAssertion(Annotation( "ncithesaurus:Serum") "UMLS:C0229671") AnnotationAssertion( "serum") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001977") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "blood serum") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (parenchyma of pancreas) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:32925") AnnotationAssertion( "FMA:63120") AnnotationAssertion( "MA:0000724") AnnotationAssertion( "VHOG:0001430") AnnotationAssertion( "pancreas parenchyma") AnnotationAssertion( "pancreatic parenchyma") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001978") AnnotationAssertion(rdfs:label "parenchyma of pancreas") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (venule) AnnotationAssertion(Annotation( "MESH:A07.231.432.952") Annotation( "MP:0004125") "One of the minute vessels that collect deoxygenated blood from the capillary plexuses returns it to the veins.") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0005315") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "Multi-tissue structure part of the blood vasculature formed by the anastomosis of capillaries. Venules carry blood toward the heart.[TAO]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0002626") AnnotationAssertion( "EMAPA:35917") AnnotationAssertion( "FMA:63130") AnnotationAssertion( "MA:0000071") AnnotationAssertion( "MESH:A07.231.432.952") AnnotationAssertion( "NCIT:C12818") AnnotationAssertion( "TAO:0005315") AnnotationAssertion(Annotation( "ncithesaurus:Venule") "UMLS:C0042520") AnnotationAssertion( "VHOG:0001765") AnnotationAssertion( "ZFA:0005315") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "venula") AnnotationAssertion( "UBERON:0001979") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "venule") AnnotationAssertion( "Illu:capillary.jpg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (arteriole) AnnotationAssertion(Annotation( "GO:0014830") "The smallest division of the artery located between the muscular arteries and the capillaries[GO].") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0002138") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "Multi-tissue structure part of the blood vasculature, feeds into capillaries. Arterioles carry blood away from the heart.[TAO]") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0010253") Annotation( "AAO"^^xsd:string) Annotation( "AAO:BJB"^^xsd:string) "Small, terminal branch of an artery which generally connects to capillaries.[AAO]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010253") AnnotationAssertion( "BTO:0001997") AnnotationAssertion( "EMAPA:35146") AnnotationAssertion( "FMA:63182") AnnotationAssertion( "MA:0000063") AnnotationAssertion( "MESH:D001160") AnnotationAssertion( "NCIT:C12672") AnnotationAssertion( "TAO:0002138") AnnotationAssertion(Annotation( "ncithesaurus:Arteriole") "UMLS:C0003847") AnnotationAssertion( "VHOG:0001763") AnnotationAssertion( "ZFA:0005255") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "arteriola") AnnotationAssertion( "UBERON:0001980") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "arteriole") AnnotationAssertion( "Illu:capillary.jpg"^^xsd:anyURI) SubClassOf(Annotation( "MA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (blood vessel) AnnotationAssertion(Annotation( ) Annotation( "BTO:0001102") "A vessel through which blood circulates in the body.") AnnotationAssertion( "consider adopting the EMAPA superclass 'vascular element', which includes microvasculature (e.g. capillaries), vascular plexus") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001250") Annotation( "VHOG"^^xsd:string) Annotation( ) "Any of the vessels through which blood circulates in the body. [XAO:0001011_][VHOG]") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0011004") Annotation( "AAO"^^xsd:string) Annotation( "AAO:EJS"^^xsd:string) "Any of the vessels through which blood circulates in the body.[AAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001250") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "DOI:10.1196/annals.1341.002 Bishopric NH, Evolution of the heart from bacteria to man. Annals of the New York Academy of Sciences (2006)") "The appearance of Chordata and subsequently the vertebrates is accompanied by a rapid structural diversification of this primitive linear heart: looping, unidirectional circulation, an enclosed vasculature, and the conduction system.[well established][VHOG]") AnnotationAssertion( "annelids have blood vessels, but this class is not applicable to annelids.") AnnotationAssertion(Annotation( "FMA"^^xsd:string) "FMA:63183 Blood vessel is categorized as 'general anatomical term'. Suggestion to map to region of vascular tree from Terry H at JAX") AnnotationAssertion(Annotation( "EMAPA:35993") "vascular element") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0011004") AnnotationAssertion( "AEO:0000207") AnnotationAssertion( "BTO:0001102") AnnotationAssertion( "CALOHA:TS-0080") AnnotationAssertion( "EFO:0000817") AnnotationAssertion( "EHDAA2:0003252") AnnotationAssertion( "EHDAA:240") AnnotationAssertion( "EMAPA:32743") AnnotationAssertion( "EMAPA:35993") AnnotationAssertion( "FMA:50722") AnnotationAssertion( "FMA:63183") AnnotationAssertion( "GAID:169") AnnotationAssertion( "MA:0000060") AnnotationAssertion( "MAT:0000393") AnnotationAssertion( "MESH:D001808") AnnotationAssertion( "NCIT:C12679") AnnotationAssertion( "NLXANAT:090901") AnnotationAssertion( "OpenCyc:Mx4rvVjxlpwpEbGdrcN5Y29ycA") AnnotationAssertion( "TAO:0002137") AnnotationAssertion(Annotation( "ncithesaurus:Blood_Vessel") "UMLS:C0005847") AnnotationAssertion( "VHOG:0001250") AnnotationAssertion( "XAO:0001011") AnnotationAssertion( "ZFA:0005314") AnnotationAssertion(Annotation( "FMA:50722") "region of vascular tree organ") AnnotationAssertion(Annotation( "FMA:50722") "vascular tree organ region") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "vas sanguineum") AnnotationAssertion( "UBERON:0001981") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "blood vessel") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/2/29/Circulatory_System_en.svg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "AEO"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "GO:0072360") ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (capillary) AnnotationAssertion(Annotation( ) Annotation( ) Annotation( "ISBN:0073040584"^^xsd:string) "Any of the smallest blood vessels connecting arterioles with venules.") AnnotationAssertion( "not all sources agree capillary is a blood vessel - consider adopting EMAPA superclass of vascular element") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0010252") Annotation( "AAO"^^xsd:string) Annotation( "AAO:BJB"^^xsd:string) "Any of the tiny blood vessels connecting the arterioles to the venules.[AAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001253") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "DOI:10.1196/annals.1341.002 Bishopric NH, Evolution of the heart from bacteria to man. Annals of the New York Academy of Sciences (2006)") "The appearance of Chordata and subsequently the vertebrates is accompanied by a rapid structural diversification of this primitive linear heart: looping, unidirectional circulation, an enclosed vasculature, and the conduction system.[well established][VHOG]") AnnotationAssertion( "capillaries lack tunica media and tunica adventitia; only the endothelial wall of the tunica intima belongs") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010252") AnnotationAssertion( "BTO:0002045") AnnotationAssertion( "CALOHA:TS-2006") AnnotationAssertion( "EFO:0001906") AnnotationAssertion( "EMAPA:35198") AnnotationAssertion( "EV:0100035") AnnotationAssertion( "FMA:63194") AnnotationAssertion( "MA:0000065") AnnotationAssertion( "MESH:A07.231.432.410") AnnotationAssertion( "NCIT:C12685") AnnotationAssertion( "NLXANAT:090902") AnnotationAssertion( "OpenCyc:Mx4rvWEU-5wpEbGdrcN5Y29ycA") AnnotationAssertion( "TAO:0005250") AnnotationAssertion(Annotation( "ncithesaurus:Capillary") "UMLS:C0935624") AnnotationAssertion( "VHOG:0001253") AnnotationAssertion( "XAO:0000116") AnnotationAssertion( "ZFA:0005250") AnnotationAssertion( "blood capillary") AnnotationAssertion( "capillary vessel") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001982") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "capillary") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/2/2f/A_red_blood_cell_in_a_capillary,_pancreatic_tissue_-_TEM.jpg"^^xsd:anyURI) SubClassOf(Annotation( "FMA"^^xsd:string) Annotation( "MA"^^xsd:string) Annotation( "XAO"^^xsd:string) ) SubClassOf(Annotation( "ZFA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (crypt of Lieberkuhn) AnnotationAssertion(Annotation( ) Annotation( "ISBN:0-683-40008-8"^^xsd:string) Annotation( "MP:0000490") "The tubular intestinal glands found in the mucosal membranes.") AnnotationAssertion(Annotation( ) "In histology, an intestinal crypt, also crypt of LieberkC "ISBN:9780521617147") "Most fish lack intestinal glands that extend into the mucosa, Gadidae (Jacobshagen 1937) and Macrouridae (Geisterdoerfer 1973( have glands at the base of surface folds throughout intestine - these have been called crypts, but cell types are the same as for surface epithelium. Crypts have been described in salamander midguts (Reeder 1964) some reptiles (Luppa 1977) and some birds (Ziswiler and Farner 1972). Reptile crypts are less developed than birds and mammals, with epithelium similar to the surface. Avian crypts vary from those with absorprive and goblet cells to those that have cells with basophilic granules") AnnotationAssertion(Annotation( ) "intestinal gland") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:35266") AnnotationAssertion( "FMA:63621") AnnotationAssertion( "MA:0001535") AnnotationAssertion( "NCIT:C32411") AnnotationAssertion(Annotation( "ncithesaurus:Crypts_of_the_Lieberkuhn") "UMLS:C1621887") AnnotationAssertion( "Lieberkuhn crypt") AnnotationAssertion( "Lieberkuhn gland") AnnotationAssertion( "Lieberkuhn's gland") AnnotationAssertion(Annotation( ) "Lieberkuhn's glands") AnnotationAssertion( "Lieberkühn crypt") AnnotationAssertion( "crypt of Lieberkuhn") AnnotationAssertion( "crypt of Lieberkühn") AnnotationAssertion(Annotation( ) "crypts of Lieberkühn") AnnotationAssertion( "follicles of Lieberkühn") AnnotationAssertion( "intestinal crypt") AnnotationAssertion(Annotation( ) "intestinal crypts") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:63621") "intestinal gland of Lieberkuhn") AnnotationAssertion( "UBERON:0001983") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "crypt of Lieberkuhn") AnnotationAssertion(rdfs:seeAlso ) AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/3/38/Small_intestine_low_mag.jpg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (crypt of Lieberkuhn of large intestine) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A crypt of Lieberkühn that is part of a large intestine [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:35465") AnnotationAssertion( "FMA:63622") AnnotationAssertion( "MA:0001544") AnnotationAssertion( "NCIT:C32924") AnnotationAssertion(Annotation( "ncithesaurus:Large_Intestinal_Crypt_of_the_Lieberkuhn") "UMLS:C1179777") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "Lieberkühn crypt of large intestine") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "intestinal gland of large intestine") AnnotationAssertion( "large intestinal crypt of Lieberkuhn") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "large intestine Lieberkühn crypt") AnnotationAssertion( "large intestine crypt of Lieberkuhn") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "large intestine intestinal gland") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001984") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "crypt of Lieberkuhn of large intestine") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (corneal endothelium) AnnotationAssertion(Annotation( ) "A monolayer of specialized, flattened, mitochondria-rich cells that lines the posterior surface of the cornea and faces the anterior chamber of the eye[WP].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "CALOHA:TS-0172") AnnotationAssertion( "EMAPA:35935") AnnotationAssertion( "FMA:63882") AnnotationAssertion( "GAID:891") AnnotationAssertion( "MA:0001242") AnnotationAssertion( "MESH:D004728") AnnotationAssertion( "NCIT:C12707") AnnotationAssertion( "TAO:0002186") AnnotationAssertion(Annotation( "ncithesaurus:Corneal_Endothelium") "UMLS:C0014259") AnnotationAssertion( "ZFA:0001687") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "cornea endothelium") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "endothelium of cornea") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "epithelium posterius corneae") AnnotationAssertion( "UBERON:0001985") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "corneal endothelium") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/6/66/Gray871.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (endothelium) AnnotationAssertion(Annotation( ) Annotation( "FMA:63916") Annotation( "MESH:A10.272.491") "A layer of epithelium that lines the heart, blood vessels (endothelium, vascular), lymph vessels (endothelium, lymphatic), and the serous cavities of the body[MESH]. Simple squamous epithelium which lines blood and lymphatic vessels and the heart[FMA].") AnnotationAssertion( "endothelial") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0000393") AnnotationAssertion( "CALOHA:TS-0278") AnnotationAssertion( "EFO:0002548") AnnotationAssertion( "FMA:63916") AnnotationAssertion( "GAID:520") AnnotationAssertion( "MESH:D004727") AnnotationAssertion( "NCIT:C12481") AnnotationAssertion(Annotation( "ncithesaurus:Endothelium") "UMLS:C0014257") AnnotationAssertion( "galen:Endothelium") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001986") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "The term 'endothelium' has been either restricted to the continuous cell layer of the vertebrates, as we are assuming here, or applied to all the cells able to adhere to the luminal surface of the vascular basement membrane (Casley-Smith 1980)") AnnotationAssertion(rdfs:label "endothelium") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (placenta) AnnotationAssertion(Annotation( ) Annotation( ) "Organ of metabolic interchange between fetus and mother, partly of embryonic origin and partly of maternal origin[GO]. The fetal portion of the placenta is known as the villous chorion. The maternal portion is known as the decidua basalis. The two portions are held together by anchoring villi that are anchored to the decidua basalis by the cytotrophoblastic shell.") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001266") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "DOI:10.1038/35054550 Murphy WJ, Eizirik E, Johnson WE, Zhang YP, Ryder OA, O'Brien SJ, Molecular phylogenetics and the origins of placental mammals. Nature (2001)") "Phylogenetic analyses of the concatenated data set using maximum parsimony, maximum likelihood and distance based (neighbour joining) methods all converged on a nearly identical, well supported topology defining four principal eutherian lineages. The results affirm monophyly of traditional placental orders (except Artiodactyla and Insectivora), and also support some previously proposed, as well as new, superordinal clades.[well established][VHOG]") AnnotationAssertion( "placental") AnnotationAssertion( "Eutherians: In eutherians, the chorioallantoic membrane of the fetus establishes intimate contact with the adjacent vascular wall of the mother's uterus to produce the placenta, a composite structure formed in part from tissues of the fetus and in part from tissues of the mother [ISBN:0073040584 (Vertebrates, Kardong)]. TODO - is taxon restriction too strict, even if we restrict def to allantoic placenta? - WP says: also found in some snakes and lizards with varying levels of development up to mammalian levels. Pough et al. 1992. Herpetology: Third Edition. Pearson Prentice Hall:Pearson Education, Inc., 2002. // See also: DOI:10.1002/jmor.11011") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0001078") AnnotationAssertion( "CALOHA:TS-0799") AnnotationAssertion( "EFO:0001407") AnnotationAssertion( "EMAPA:35689") AnnotationAssertion( "EV:0100119") AnnotationAssertion( "FMA:63934") AnnotationAssertion( "GAID:379") AnnotationAssertion( "MA:0000386") AnnotationAssertion( "MAT:0000279") AnnotationAssertion( "MESH:A16.759") AnnotationAssertion( "MIAA:0000279") AnnotationAssertion( "NCIT:C13272") AnnotationAssertion( "OpenCyc:Mx4rvv4zZ5wpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Placenta") "UMLS:C0032043") AnnotationAssertion( "VHOG:0001266") AnnotationAssertion(Annotation( "ISBN:0073040584"^^xsd:string) "allantoic placenta") AnnotationAssertion( "eutherian placenta") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001987") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "Marsupials possess only a rudimentary yolk-type placenta, with reduced nutrient and oxygen exchanging capabilities.") AnnotationAssertion(rdfs:label "placenta") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/6/66/Placenta.jpg"^^xsd:anyURI) AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/f/f1/Placenta.svg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "ISBN:0073040584"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "Wikipedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "ISBN:0073040584"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (feces) AnnotationAssertion(Annotation( ) Annotation( ) "Portion of semisolid bodily waste discharged through the anus[MW,modified].") AnnotationAssertion(Annotation( "FMA:64183") "Excretion in semisolid state processed by the intestine.[FMA]") AnnotationAssertion( "fecal") AnnotationAssertion( "excreta") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0000440") AnnotationAssertion( "CALOHA:TS-2345") AnnotationAssertion( "ENVO:00002003") AnnotationAssertion( "FMA:64183") AnnotationAssertion( "GAID:1199") AnnotationAssertion( "MA:0002509") AnnotationAssertion( "MAT:0000053") AnnotationAssertion( "MESH:D005243") AnnotationAssertion( "MIAA:0000053") AnnotationAssertion( "NCIT:C13234") AnnotationAssertion( "OpenCyc:Mx4rvVjJMZwpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Feces") "UMLS:C0015733") AnnotationAssertion( "galen:Feces") AnnotationAssertion( "faeces") AnnotationAssertion( "fecal material") AnnotationAssertion( "fecal matter") AnnotationAssertion(Annotation( ) "piece of shit") AnnotationAssertion( "portion of excrement") AnnotationAssertion( "portion of faeces") AnnotationAssertion( "portion of fecal material") AnnotationAssertion( "portion of fecal matter") AnnotationAssertion( "portion of feces") AnnotationAssertion(Annotation( ) "portionem cacas") AnnotationAssertion( "stool") AnnotationAssertion(Annotation( ) "cow dung") AnnotationAssertion(Annotation( ) "cow pat") AnnotationAssertion( "dung") AnnotationAssertion(Annotation( ) "fewmet") AnnotationAssertion(Annotation( ) "frass") AnnotationAssertion(Annotation( ) "guano") AnnotationAssertion( "portion of dung") AnnotationAssertion( "portion of guano") AnnotationAssertion( "portion of scat") AnnotationAssertion( "scat") AnnotationAssertion(Annotation( ) "spraint") AnnotationAssertion( "uberon") AnnotationAssertion( "droppings") AnnotationAssertion(Annotation( "BTO:0000440") "excrement") AnnotationAssertion( "ordure") AnnotationAssertion( "spoor") AnnotationAssertion( "UBERON:0001988") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "feces") SubClassOf( ) # Class: (superior cervical ganglion) AnnotationAssertion(Annotation( ) Annotation( "ZFIN:curator"^^xsd:string) "Trunk ganglion which is bilaterally paired and located at the anterior end of the sympathetic ganglion chain.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:GSC") AnnotationAssertion( "BAMS:SCGn") AnnotationAssertion( "BTO:0001325") AnnotationAssertion( "EFO:0001945") AnnotationAssertion( "EHDAA:8943") AnnotationAssertion( "EMAPA:18441") AnnotationAssertion( "FMA:6467") AnnotationAssertion( "GAID:712") AnnotationAssertion( "MA:0001156") AnnotationAssertion( "MESH:D017783") AnnotationAssertion( "NCIT:C92213") AnnotationAssertion( "RETIRED_EHDAA2:0001946") AnnotationAssertion( "TAO:0001572") AnnotationAssertion(Annotation( "ncithesaurus:Superior_Cervical_Ganglion") "UMLS:C0206257") AnnotationAssertion( "ZFA:0001572") AnnotationAssertion( "superior cervical sympathetic ganglion") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "ZFA:0001572") Annotation( ) "SCG") AnnotationAssertion(Annotation( ) Annotation( ) "ganglion cervicale superius") AnnotationAssertion(Annotation( "BTO:0001325") "ganglion cervicale superius") AnnotationAssertion( "superior sympathetic cervical ganglion") AnnotationAssertion( "UBERON:0001989") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "superior cervical ganglion") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/e/e1/Gray844.png"^^xsd:anyURI) SubClassOf( ) # Class: (middle cervical ganglion) AnnotationAssertion(Annotation( "ISBN:0-683-40008-8"^^xsd:string) Annotation( "MP:0001016") "The small ganglion located at the level of the cricoid cartilage of the laryngeal wall.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:GMC") AnnotationAssertion( "BTO:0000359") AnnotationAssertion( "EHDAA:8941") AnnotationAssertion( "EMAPA:18440") AnnotationAssertion( "FMA:6468") AnnotationAssertion( "MA:0001155") AnnotationAssertion( "NCIT:C92212") AnnotationAssertion( "RETIRED_EHDAA2:0001180") AnnotationAssertion(Annotation( "ncithesaurus:Middle_Cervical_Ganglion") "UMLS:C0228999") AnnotationAssertion( "middle cervical sympathetic ganglion") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "ganglion cervicale medium") AnnotationAssertion(Annotation( "BTO:0000359") "ganglion cervicale medium") AnnotationAssertion( "UBERON:0001990") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "middle cervical ganglion") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/e/e1/Gray844.png"^^xsd:anyURI) SubClassOf( ) # Class: (cervical ganglion) AnnotationAssertion(Annotation( ) "The cervical ganglia are paravertebral ganglia of the sympathetic nervous system. They consist of three paravertebral ganglia: superior cervical ganglion middle cervical ganglion inferior cervical ganglion. The inferior ganglion may be fused with the first thoracic ganglion to form a single structure, the stellate ganglion. Nerves emerging from cervical sympathetic ganglia contribute to the cardiac plexus, among other things. [WP,unvetted].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0000113") AnnotationAssertion( "EMAPA:18438") AnnotationAssertion( "FMA:6470") AnnotationAssertion( "MA:0001153") AnnotationAssertion( "cervical sympathetic ganglion") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001991") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "cervical ganglion") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/e/e1/Gray844.png"^^xsd:anyURI) SubClassOf( ) # Class: (papillary layer of dermis) AnnotationAssertion(Annotation( "ncithesaurus:Papillary_Dermis") "The upper layer of the dermis beneath the epidermis, composed of dense irregular connective tissue[ncit,modified].") AnnotationAssertion( "todo - check tissue composition") AnnotationAssertion(Annotation( "FMA:64776") "Dense irregular connective tissue of the skin that consists of fibroblasts, various connective tissue cell types, and collagen, predominantly type III.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:35282") AnnotationAssertion( "FMA:64776") AnnotationAssertion( "MA:0000800") AnnotationAssertion( "MA:0000802") AnnotationAssertion( "NCIT:C33630") AnnotationAssertion( "NCIT:C94819") AnnotationAssertion(Annotation( "ncithesaurus:Stratum_Papillare") "UMLS:C0221930") AnnotationAssertion(Annotation( "ncithesaurus:Papillary_Dermis") "UMLS:C0682598") AnnotationAssertion(Annotation( "MP:0009545") "corpus papillary") AnnotationAssertion(Annotation( "MA:0000800") "dermis papillary layer") AnnotationAssertion( "papillary dermis") AnnotationAssertion(Annotation( "MP:0009545") "papillary layer") AnnotationAssertion(Annotation( "FMA:64776") "papillary layer of dermis") AnnotationAssertion(Annotation( "MP:0009545") "stratum papillare") AnnotationAssertion(Annotation( "FMA:64776") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "stratum papillare (dermis)") AnnotationAssertion(Annotation( "MP:0009545") "stratum papillare corii") AnnotationAssertion(Annotation( "FMA:64776") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "stratum papillare dermis") AnnotationAssertion(Annotation( "MA:0000802") "superficial dermis") AnnotationAssertion(Annotation( "MP:0009545") "superficial dermis") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "EMAPA:35282") "dermal papillary layer") AnnotationAssertion(Annotation( ) Annotation( ) "stratum papillare") AnnotationAssertion( "UBERON:0001992") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "papillary layer of dermis") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/b/b4/Normal_Epidermis_and_Dermis_with_Intradermal_Nevus_10x.JPG"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "WP"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA-text") ObjectSomeValuesFrom( )) # Class: (reticular layer of dermis) AnnotationAssertion(Annotation( "ISBN:0-683-40008-8"^^xsd:string) Annotation( "MP:0005081") "The thicker, deeper layer of the dermis, comprised of criss-crossing collagen fibers that form a strong elastic network and also containing blood and lymph vessels, nerves and nerve endings, and hair follicles.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:35283") AnnotationAssertion( "FMA:64778") AnnotationAssertion( "MA:0000801") AnnotationAssertion( "NCIT:C33631") AnnotationAssertion( "NCIT:C94818") AnnotationAssertion(Annotation( "ncithesaurus:Reticular_Dermis") "UMLS:C0682599") AnnotationAssertion(Annotation( "ncithesaurus:Stratum_Reticulare") "UMLS:C1514988") AnnotationAssertion( "dermis reticular layer") AnnotationAssertion( "dermis stratum reticulare") AnnotationAssertion( "reticular dermis") AnnotationAssertion(Annotation( ) "stratum reticulare") AnnotationAssertion(Annotation( "FMA:64778") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "stratum reticulare dermis") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "EMAPA:35283") "dermal reticular layer") AnnotationAssertion(Annotation( ) Annotation( ) "stratum reticulare") AnnotationAssertion( "UBERON:0001993") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "reticular layer of dermis") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (hyaline cartilage tissue) AnnotationAssertion(Annotation( ) Annotation( "GO_REF:0000034"^^xsd:string) Annotation( "PSPUB:0000170"^^xsd:string) Annotation( "VSAO:0000094") "Cartilage tissue primarily composed of type II collagen (thin fibrils) and a glassy appearance.") AnnotationAssertion(Annotation( "FMA:64783") "Cartilage (tissue) which consists of chondrocytes and collagen, the intercellular matrix of which is an amorphous gel with a perichondrium[FMA:64783].") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "VSAO:0000094") Annotation( "VSAO"^^xsd:string) Annotation( "PSPUB:0000170"^^xsd:string) "Cartilage tissue primarily composed of type II collagen (thin fibrils) and a glassy appearance.[VSAO]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:35414") AnnotationAssertion( "FMA:64783") AnnotationAssertion( "MA:0000109") AnnotationAssertion( "NCIT:C32746") AnnotationAssertion(Annotation( "ncithesaurus:Hyaline_Cartilage") "UMLS:C0225362") AnnotationAssertion( "VSAO:0000094") AnnotationAssertion( "XAO:0004029") AnnotationAssertion(Annotation( "MA:0000109") "hyaline cartilage") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "chondroid cartilage") AnnotationAssertion( "UBERON:0001994") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "hyaline cartilage tissue") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/2/2a/Gray292.png"^^xsd:anyURI) AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/e/ee/Hypertrophic_Zone_of_Epiphyseal_Plate.jpg"^^xsd:anyURI) SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (fibrocartilage) AnnotationAssertion(Annotation( ) Annotation( "GO_REF:0000034"^^xsd:string) Annotation( "PSPUB:0000170"^^xsd:string) Annotation( "VSAO:0000103") "Cartilage tissue intermediate between hyaline cartilage and dense connective tissue; contains of abundant collagen fibers; chondrocytes often arranged in columns.") AnnotationAssertion(Annotation( ) "A mixture of white fibrous tissue and cartilaginous tissue in various proportions. It owes its flexibility and toughness to the former of these constituents, and its elasticity to the latter. It is the only type of cartilage that contains type I collagen in addition to the normal type I[Wikipedia:Fibrocartilage]I") AnnotationAssertion(Annotation( "FMA:64784") "Cartilage (tissue) which consists of chondrocytes and collagen, the intercellular matrix of which is an amorphous gel without a well-defined perichondrium[FMA:64784].") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "VSAO:0000103") Annotation( "VSAO"^^xsd:string) Annotation( "PSPUB:0000170"^^xsd:string) "Cartilage tissue intermediate between hyaline cartilage and dense connective tissue; contains of abundant collagen fibers; chondrocytes often arranged in columns.[VSAO]") AnnotationAssertion( "fibrocartilaginous") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:64784") AnnotationAssertion( "MA:0000108") AnnotationAssertion( "NCIT:C32599") AnnotationAssertion(Annotation( "ncithesaurus:Fibrocartilage") "UMLS:C0684077") AnnotationAssertion( "VSAO:0000103") AnnotationAssertion( "XAO:0004028") AnnotationAssertion( "galen:Fibrocartilage") AnnotationAssertion(Annotation( ) "fibrocartilage tissue") AnnotationAssertion(Annotation( ) "stratified cartilage tissue") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0001995") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "The white fibrocartilages admit of arrangement into four groups-interarticular, connecting, circumferential, and stratiform -- WP. EDITOR NOTE: TODO add mineralized") AnnotationAssertion(rdfs:label "fibrocartilage") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/2/2e/Gray295.png"^^xsd:anyURI) SubClassOf( ) # Class: (elastic cartilage tissue) AnnotationAssertion(Annotation( ) Annotation( "GO_REF:0000034"^^xsd:string) Annotation( "PSPUB:0000170"^^xsd:string) Annotation( "VSAO:0000091") "Cartilage tissue that is flexible and contains abundant elastic fibers.") AnnotationAssertion(Annotation( "FMA:64785") "Cartilage (tissue) which consists of chondrocytes and collagen, the intercellular matrix of which consists of elastic fibers[FMA:64785].") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "VSAO:0000091") Annotation( "VSAO"^^xsd:string) Annotation( "PSPUB:0000170"^^xsd:string) "Cartilage tissue that is flexible and contains abundant elastic fibers.[VSAO]") AnnotationAssertion(Annotation( "MA"^^xsd:string) "MA has a distinct class for yellow") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:64785") AnnotationAssertion( "MA:0000107") AnnotationAssertion( "MA:0000485") AnnotationAssertion( "NCIT:C32494") AnnotationAssertion(Annotation( "ncithesaurus:Elastic_Cartilage") "UMLS:C0682559") AnnotationAssertion( "VSAO:0000091") AnnotationAssertion( "XAO:0004197") AnnotationAssertion(Annotation( "MA:0000107") "elastic cartilage") AnnotationAssertion(Annotation( "VSAO:0000091") "elastic cartilage tissue") AnnotationAssertion(Annotation( ) "yellow elastic cartilage") AnnotationAssertion( "yellow elastic cartilage tissue") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "reticular cartilage") AnnotationAssertion(Annotation( ) "yellow cartilage") AnnotationAssertion( "UBERON:0001996") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "elastic cartilage tissue") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/c/ca/Gray904.png"^^xsd:anyURI) SubClassOf(Annotation( "VSAO"^^xsd:string) ) SubClassOf(Annotation( "VSAO"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (olfactory epithelium) AnnotationAssertion(Annotation( ) "A sensory epithelium inside the nasal cavity that is responsible for detecting odors[WP].") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0010158") Annotation( "AAO"^^xsd:string) Annotation( "AAO:DSM") "Sensory lining of the medial wall, roof and anterior aspects of the main olfactory cavity (cavum principale).[AAO]") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0010158") Annotation( "AAO"^^xsd:string) "relationship loss: part_of principal cavity (AAO:0000992)[AAO]") AnnotationAssertion( "UBERON:0004853") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010158") AnnotationAssertion( "BIRNLEX:2703") AnnotationAssertion( "BTO:0000108") AnnotationAssertion( "CALOHA:TS-0703") AnnotationAssertion( "EFO:0001972") AnnotationAssertion( "EHDAA2:0001228") AnnotationAssertion( "EHDAA:4774") AnnotationAssertion( "EMAPA:17606") AnnotationAssertion( "FMA:64803") AnnotationAssertion( "MA:0001325") AnnotationAssertion( "MAT:0000445") AnnotationAssertion( "NCIT:C33203") AnnotationAssertion( "TAO:0000554") AnnotationAssertion(Annotation( "BIRNLEX:2703") "UMLS:C0599332") AnnotationAssertion(Annotation( "ncithesaurus:Olfactory_Epithelium") "UMLS:C0599332") AnnotationAssertion( "VHOG:0000985") AnnotationAssertion( "ZFA:0000554") AnnotationAssertion(Annotation( "BIRNLEX:2703") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=1900") AnnotationAssertion(Annotation( "NCBIBook:NBK55971") "main olfactory epithelium") AnnotationAssertion(Annotation( "MA:0001325") "nasal cavity olfactory epithelium") AnnotationAssertion(Annotation( "BIRNLEX:2703") "olfactory membrane") AnnotationAssertion( "olfactory sensory epithelium") AnnotationAssertion( "sensory olfactory epithelium") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NCBIBook:NBK55971") Annotation( ) "MOE") AnnotationAssertion( "nasal epithelium") AnnotationAssertion( "nasal sensory epithelium") AnnotationAssertion(Annotation( ) "pseudostratified main olfactory epithelium") AnnotationAssertion( "UBERON:0001997") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "Genes: V1Rs, Trpc2 present in lamprey") AnnotationAssertion(rdfs:label "olfactory epithelium") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/4/4d/Gray857.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "NIFSTD"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "NBK26868") ObjectSomeValuesFrom( )) SubClassOf(Annotation( "NBK26868") ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (sternocostal joint) AnnotationAssertion(Annotation( ) "Arthrodial joints, with the exception of the first, in which the cartilage is directly united with the sternum, and which is, therefore, a synarthrodial articulation.") AnnotationAssertion(Annotation( "FMA"^^xsd:string) "FMA has FMA:72323 'Costosternal joint', isa Synchondrosis, no other relationships") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:7954") AnnotationAssertion( "GAID:271") AnnotationAssertion( "MA:0001512") AnnotationAssertion( "MESH:D013248") AnnotationAssertion( "NCIT:C33617") AnnotationAssertion(Annotation( "ncithesaurus:Sternocostal_Joint") "UMLS:C1305902") AnnotationAssertion(Annotation( "FMA:7954") "articulatio sternocostalis") AnnotationAssertion( "costo sternal joint") AnnotationAssertion( "costosternal joint") AnnotationAssertion(Annotation( "FMA:7954") "sternochondral joint") AnnotationAssertion(Annotation( "FMA:7954") "sternocostal synovial joint") AnnotationAssertion(Annotation( "FMA:7954") "synovial sternocostal joint") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "articulationes sternocostales") AnnotationAssertion( "UBERON:0001998") AnnotationAssertion(rdfs:label "sternocostal joint") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/c/cc/Gray315.png"^^xsd:anyURI) SubClassOf(Annotation( "MA"^^xsd:string) ) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (iliopsoas) AnnotationAssertion(Annotation( ) "Anatomical cluster consisting of the iliacus and the psoas major[WP].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0000621") AnnotationAssertion( "EHDAA2:0000812") AnnotationAssertion( "EHDAA:9458") AnnotationAssertion( "EMAPA:18520") AnnotationAssertion( "FMA:64918") AnnotationAssertion( "MA:0002321") AnnotationAssertion( "NCIT:C32764") AnnotationAssertion(Annotation( "ncithesaurus:Iliopsoas_Muscle") "UMLS:C0224417") AnnotationAssertion( "VHOG:0001005") AnnotationAssertion( "Hyrtl's muscle") AnnotationAssertion(Annotation( "BTO:0000621") "iliopsoas muscle") AnnotationAssertion(Annotation( "VHOG:0001005") "illopsoas") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "VHOG:0001005") "ilio-psoas") AnnotationAssertion(Annotation( ) Annotation( ) "musculus iliopsoas") AnnotationAssertion( "UBERON:0001999") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "iliopsoas") AnnotationAssertion(rdfs:seeAlso "https://github.com/obophenotype/uberon/issues/478"^^xsd:anyURI) AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/e/e2/Anterior_Hip_Muscles_2.PNG"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "lesser trochanter of femur") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (gluteal muscle) AnnotationAssertion(Annotation( ) "On of the muscles that make up the buttocks: the gluteus maximus muscle, gluteus medius muscle and gluteus minimus muscle.") AnnotationAssertion( "gluteal") AnnotationAssertion(Annotation( "FMA"^^xsd:string) "FMA includes tensor fasciae latae and other buttock muscles. BTO def: Any one of three large skeletal muscles that form the buttock and move the thigh.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0000531") AnnotationAssertion( "EHDAA2:0000715") AnnotationAssertion( "EMAPA:18186") AnnotationAssertion( "FMA:64922") AnnotationAssertion( "MA:0000535") AnnotationAssertion( "NCIT:C78205") AnnotationAssertion(Annotation( "ncithesaurus:Gluteal_Muscle") "UMLS:C1744702") AnnotationAssertion( "VHOG:0001316") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0000531") "gluteus") AnnotationAssertion( "gluteus muscle") AnnotationAssertion( "UBERON:0002000") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "gluteal muscle") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (joint of rib) AnnotationAssertion(Annotation( ) "Any joint that connects a rib to another structure (or another rib). Examples: costochondral, costovertebral, interchondral, sternocostal joints.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA_RETIRED:64994") AnnotationAssertion( "MA:0001508") AnnotationAssertion( "NCIT:C49575") AnnotationAssertion(Annotation( "ncithesaurus:Joint_of_the_Rib") "UMLS:C1261194") AnnotationAssertion( "rib joint") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002001") AnnotationAssertion(rdfs:label "joint of rib") SubClassOf( ) SubClassOf(Annotation( "cjm"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (interchondral joint) AnnotationAssertion(Annotation( ) "Interchondral Articulations (articulations of the cartilages of the ribs with each other). The contiguous borders of the sixth, seventh, and eighth, and sometimes those of the ninth and tenth, costal cartilages articulate with each other by small, smooth, oblong facets. Each articulation is enclosed in a thin articular capsule, lined by synovial membrane and strengthened laterally and medially by ligamentous fibers which pass from one cartilage to the other. Sometimes the fifth costal cartilages, more rarely the ninth and tenth, articulate by their lower borders with the adjoining cartilages by small oval facets; more frequently the connection is by a few ligamentous fibers.") AnnotationAssertion( "Consider creating logical definition after obo2owl cardinality tests") AnnotationAssertion(Annotation( "FMA"^^xsd:string) "FMA has both synovial and syndesmosis subtypes - consider adding separate class for FMA:7955 Synovial interchondral joint") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:10425") AnnotationAssertion( "MA:0001511") AnnotationAssertion(Annotation( "FMA:7955") "articulatio interchondralis") AnnotationAssertion(Annotation( "FMA:71378") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "articulationes interchondrales") AnnotationAssertion(Annotation( ) "interchondral articulation") AnnotationAssertion(Annotation( "FMA:71378") "interchondral joints") AnnotationAssertion(Annotation( "FMA:71378") "interchondral joints set") AnnotationAssertion(Annotation( "FMA:7955") "synovial interchondral joint") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:10425") "interchondral joint of 9th and 10th ribs") AnnotationAssertion(Annotation( "FMA:10425") "interchondral syndesmosis") AnnotationAssertion(Annotation( "FMA:10425") "non-synovial interchondral joint") AnnotationAssertion( "UBERON:0002002") AnnotationAssertion(rdfs:label "interchondral joint") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/c/cc/Gray315.png"^^xsd:anyURI) SubClassOf(Annotation( "MA"^^xsd:string) ) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ObjectIntersectionOf(ObjectMinCardinality(2 ) ObjectMaxCardinality(2 ))) # Class: (obsolete peripheral nerve) AnnotationAssertion(Annotation( ) "A cable-like bundle of peripheral axons (the long, slender projections of neurons). A nerve provides a common pathway for the electrochemical nerve impulses that are transmitted along each of the axons. Nerves are found only in the peripheral nervous system. In the central nervous system, the analogous structures are known as tracts[WP].") AnnotationAssertion( "UBERON:0001021") AnnotationAssertion(Annotation( "FMA:65239") "Neural tree (organ) which is directly continuous with the neuraxis. Examples: phrenic nerve, radial nerve, ilioinguinal nerve, sciatic nerve.") AnnotationAssertion( "UBERON:0003377") AnnotationAssertion(Annotation( "BIRNLEX:1615") "nerve part of peripheral nervous system") AnnotationAssertion(Annotation( "FMA:65239") "peripheral nerve tree") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002003") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "See https://github.com/obophenotype/mouse-anatomy-ontology/issues/6") AnnotationAssertion(rdfs:label "obsolete peripheral nerve") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (trunk of sciatic nerve) AnnotationAssertion( "EMAPA:18577") AnnotationAssertion( "FMA:65507") AnnotationAssertion( "MA:0001178") AnnotationAssertion( "sciatic nerve trunk") AnnotationAssertion( "sciatic neural trunk") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002004") AnnotationAssertion(rdfs:label "trunk of sciatic nerve") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (enteric nervous system) AnnotationAssertion(Annotation( "GO:0048484") "The enteric nervous system is composed of two ganglionated neural plexuses in the gut wall which form one of the three major divisions of the autonomic nervous system. The enteric nervous system innervates the gastrointestinal tract, the pancreas, and the gall bladder. It contains sensory neurons, interneurons, and motor neurons. Thus the circuitry can autonomously sense the tension and the chemical environment in the gut and regulate blood vessel tone, motility, secretions, and fluid transport. The system is itself governed by the central nervous system and receives both parasympathetic and sympathetic innervation[GO].") AnnotationAssertion(Annotation( "FMA"^^xsd:string) "most sources classify this as autonomic, but in FMA it is placed directly under nervous system.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:ENS") AnnotationAssertion( "BIRNLEX:1166") AnnotationAssertion( "BTO:0002506") AnnotationAssertion( "CALOHA:TS-2093") AnnotationAssertion( "EFO:0000895") AnnotationAssertion( "EHDAA2:0004202") AnnotationAssertion( "EMAPA:26922") AnnotationAssertion( "FMA:66070") AnnotationAssertion( "GAID:799") AnnotationAssertion( "MA:0000222") AnnotationAssertion( "MAT:0000102") AnnotationAssertion( "MESH:D017615") AnnotationAssertion( "MIAA:0000102") AnnotationAssertion( "TAO:0001155") AnnotationAssertion(Annotation( "BIRNLEX:1166") "UMLS:C0206111") AnnotationAssertion( "ZFA:0001155") AnnotationAssertion(Annotation( "EFO:0000895") "PNS - enteric") AnnotationAssertion(Annotation( "EFO:0000895") "enteric PNS") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002005") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "enteric nervous system") SubClassOf( ) SubClassOf(Annotation( "cjm"^^xsd:string) ) SubClassOf(Annotation( "FMA"^^xsd:string) Annotation( "MA"^^xsd:string) Annotation( "NIF"^^xsd:string) Annotation( "ZFA-isa-changed") ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (cortex of lymph node) AnnotationAssertion(Annotation( ) "Peripheral portion of the lymph node, underneath the capsule[WP].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:35525") AnnotationAssertion( "FMA:66253") AnnotationAssertion( "MA:0000740") AnnotationAssertion( "NCIT:C33029") AnnotationAssertion(Annotation( "ncithesaurus:Lymph_Node_Cortex") "UMLS:C0933402") AnnotationAssertion( "lymph node cortex") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "cortex nodi lymphoidei") AnnotationAssertion( "UBERON:0002006") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "cortex of lymph node") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/b/b8/Illu_lymph_node_structure.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (medulla of lymph node) AnnotationAssertion(Annotation( ) Annotation( ) "The medullary portion of the lymph node, which contains large blood vessels, sinuses and medullary cords that contain antibody-secreting plasma cells.") AnnotationAssertion( "EMAPA:35529") AnnotationAssertion( "FMA:66254") AnnotationAssertion( "MA:0000745") AnnotationAssertion( "lymph node medulla") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "medulla nodi lymphoidei") AnnotationAssertion( "UBERON:0002007") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "medulla of lymph node") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (cardiac nerve plexus) AnnotationAssertion(Annotation( ) "A plexus of nerves situated at the base of the heart that innervate the heart.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37460") AnnotationAssertion( "FMA:6628") AnnotationAssertion( "MA:0001138") AnnotationAssertion( "NCIT:C52833") AnnotationAssertion(Annotation( "ncithesaurus:Cardiac_Nerve_Plexus") "UMLS:C0459528") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "autonomic nerve plexus of heart") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "autonomic plexus of heart") AnnotationAssertion( "cardiac plexus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "heart autonomic nerve plexus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "heart autonomic plexus") AnnotationAssertion(Annotation( ) Annotation( ) "plexus cardiacus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002008") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "cardiac nerve plexus") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/7/77/Gray838.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pulmonary nerve plexus) AnnotationAssertion(Annotation( ) "The pulmonary plexus is an autonomic plexus formed from pulmonary branches of vagus nerve and the sympathetic trunk that supplies the Bronchial tree. [WP,modified].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37462") AnnotationAssertion( "FMA:6629") AnnotationAssertion( "MA:0001143") AnnotationAssertion(Annotation( "FMA:6629") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "plexus pulmonalis") AnnotationAssertion(Annotation( "FMA:6629") "pulmonary plexus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "plexus pulmonalis") AnnotationAssertion( "UBERON:0002009") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "pulmonary nerve plexus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (celiac nerve plexus) AnnotationAssertion(Annotation( ) "A complex network of nerves located in the abdomen behind the stomach. The celiac plexus is located near where the celiac trunk, superior mesenteric artery, and renal arteries branch from the abdominal aorta. It is behind the stomach and the omental bursa and in front of the crura of the diaphragm, on the level of the first lumbar vertebra, L1. The plexus is formed (in part) by the greater and lesser splanchnic nerves of both sides, and also parts of the right vagus nerve. The celiac plexus proper consists of the celiac ganglia with a network of interconnecting fibers. The aorticorenal ganglia are often considered to be part of the celiac ganglia, and thus, part of the plexus. [WP,unvetted].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37461") AnnotationAssertion( "FMA:6630") AnnotationAssertion( "GAID:796") AnnotationAssertion( "MA:0001139") AnnotationAssertion( "MESH:D002447") AnnotationAssertion( "celiac plexus") AnnotationAssertion( "coeliac plexus") AnnotationAssertion(Annotation( "FMA:6630") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "plexus coeliacus") AnnotationAssertion(Annotation( "FMA:6630") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "plexus nervosus coeliacus") AnnotationAssertion( "uberon") AnnotationAssertion( "coeliac nerve plexus") AnnotationAssertion(Annotation( ) Annotation( ) "plexus coeliacus") AnnotationAssertion(Annotation( "MESH:A08.800.050.050.150") "solar plexus") AnnotationAssertion( "UBERON:0002010") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "celiac nerve plexus") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/7/77/Gray838.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (thoracodorsal artery) AnnotationAssertion(Annotation( ) "The thoracodorsal artery is a branch of the subscapular artery. It travels inferiorly with the thoracodorsal nerve and supplies the latissimus dorsi. [WP,unvetted].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37129") AnnotationAssertion( "FMA:66320") AnnotationAssertion( "MA:0002065") AnnotationAssertion( "NCIT:C53018") AnnotationAssertion(Annotation( "ncithesaurus:Thoracodorsal_Artery") "UMLS:C0933449") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "arteria thoracodorsalis") AnnotationAssertion( "UBERON:0002011") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "thoracodorsal artery") AnnotationAssertion( "Latissimus:dorsi.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pulmonary artery) AnnotationAssertion(Annotation( ) Annotation( ) "An artery that carries deoxygenated blood from heart to the lungs. They are the only arteries (other than umbilical arteries in the fetus) that carry deoxygenated blood..") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0010221") Annotation( "AAO"^^xsd:string) Annotation( "AAO:BJB"^^xsd:string) "Major artery which supplies blood to the lungs.[AAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000982") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( ) "One of two arteries, leaving from the heart, the left one supplying the left lung and the right one supplying the right lung. [TFD][VHOG]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000982") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0030223693 Liem KF, Bemis WE, Walker WF, Grande L, Functional Anatomy of the Vertebrates: An Evolutionary Perspective (2001) p.620") "On the other hand, in the sister clade of the actinopterygians, the sarcopterygians, the gill circulation is supplemented with lung ventilation. As a result, the pulmonary artery and vein and a functional ductus arteriosus arose as a major evolutionary innovation from the sixth arch, giving the organism a flexible shunt to balance blood supply to and from gills and lungs according to environmental conditions.[well established][VHOG]") AnnotationAssertion( "In the human heart, the pulmonary trunk (pulmonary artery or main pulmonary artery) begins at the base of the right ventricle. It is short and wide - approximately 5 cm (2 inches) in length and 3 cm (1.2 inches) in diameter. It then branches into two pulmonary arteries (left and right), which deliver deoxygenated blood to the corresponding lung[WP]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010221") AnnotationAssertion( "BTO:0000778") AnnotationAssertion( "CALOHA:TS-0839") AnnotationAssertion( "EFO:0001399") AnnotationAssertion( "EHDAA2:0001575") AnnotationAssertion( "EHDAA:4351") AnnotationAssertion( "EMAPA:17008") AnnotationAssertion( "FMA:66326") AnnotationAssertion( "GAID:505") AnnotationAssertion( "MA:0002031") AnnotationAssertion( "MESH:D011651") AnnotationAssertion( "NCIT:C12774") AnnotationAssertion( "OpenCyc:Mx4rvVjbIpwpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Pulmonary_Artery") "UMLS:C0034052") AnnotationAssertion( "VHOG:0000982") AnnotationAssertion( "XAO:0004162") AnnotationAssertion( "galen:PulmonaryArtery") AnnotationAssertion(Annotation( "FMA:66326") "pulmonary arterial tree") AnnotationAssertion(Annotation( "FMA:66326") "pulmonary arterial tree organ part") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "arteria pulmonalis") AnnotationAssertion(Annotation( "FMA:66326") "pulmonary arterial subtree") AnnotationAssertion(Annotation( ) Annotation( ) "truncus pulmonalis") AnnotationAssertion( "UBERON:0002012") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "pulmonary artery") AnnotationAssertion( "Alveoli:diagram.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "Wikipedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) Annotation( "XAO"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) DisjointClasses( ) # Class: (superior hypogastric nerve plexus) AnnotationAssertion(Annotation( ) "The superior hypogastric plexus (in older texts, hypogastric plexus or presacral nerve) is a plexus of nerves situated on the vertebral bodies below the bifurcation of the aorta. [WP,unvetted].") AnnotationAssertion( "check relationship with generic hypogastric nerve/plexus") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:19274") AnnotationAssertion( "FMA:6642") AnnotationAssertion( "MA:0001142") AnnotationAssertion(Annotation( "FMA:6642") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "nervus presacralis") AnnotationAssertion(Annotation( "FMA:6642") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "plexus hypogastricus superior") AnnotationAssertion( "presacral nerve") AnnotationAssertion( "superior hypogastric plexus") AnnotationAssertion( "uberon") AnnotationAssertion( "hypogastric plexus") AnnotationAssertion(Annotation( ) Annotation( ) "plexus hypogastricus inferior") AnnotationAssertion( "UBERON:0002013") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "superior hypogastric nerve plexus") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/7/77/Gray838.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) SubClassOf( ObjectSomeValuesFrom( )) # Class: (inferior hypogastric nerve plexus) AnnotationAssertion(Annotation( ) "The inferior hypogastric plexus (pelvic plexus in some texts) is a plexus of nerves that supplies the viscera of the pelvic cavity. The inferior hypogastric plexus is a paired structure, with each situated on the side of the rectum in the male, and at the sides of the rectum and vagina in the female. [WP,unvetted].") AnnotationAssertion( "check relationship with generic hypogastric nerve/plexus") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:19275") AnnotationAssertion( "FMA:6643") AnnotationAssertion( "MA:0001141") AnnotationAssertion( "NCIT:C52721") AnnotationAssertion(Annotation( "ncithesaurus:Inferior_Hypogastric_Nerve_Plexus") "UMLS:C0205797") AnnotationAssertion( "inferior hypogastric plexus") AnnotationAssertion( "pelvic nerve plexus") AnnotationAssertion( "pelvic plexus") AnnotationAssertion(Annotation( "FMA:6643") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "plexus hypogastricus inferior") AnnotationAssertion(Annotation( "FMA:6643") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "plexus nervosus hypogastricus inferior") AnnotationAssertion(Annotation( "FMA:6643") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "plexus nervosus pelvicus") AnnotationAssertion(Annotation( "FMA:6643") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "plexus pelvicus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "plexus hypogastricus inferior") AnnotationAssertion( "UBERON:0002014") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "inferior hypogastric nerve plexus") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/7/77/Gray838.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) # Class: (kidney capsule) AnnotationAssertion(Annotation( "MGI:anna"^^xsd:string) Annotation( "MP:0011383") "The tough fibrous layer surrounding the kidney which is covered in a thick layer of perirenal adipose tissue that functions to provide some protection from trauma and damage.") AnnotationAssertion( "provides some protection from trauma and damage.") AnnotationAssertion( "The renal capsule relates to the other layers in the following order (moving from innermost to outermost): renal medulla renal cortex renal capsule perinephric fat (or 'perirenal fat') renal fascia paranephric fat (or 'pararenal fat') peritoneum (anteriorly), and transversalis fascia (posteriorly).[Wikipedia:Kidney_capsule]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:18679") AnnotationAssertion( "FMA:66610") AnnotationAssertion( "MA:0000370") AnnotationAssertion( "NCIT:C12885") AnnotationAssertion(Annotation( "ncithesaurus:Renal_Capsule") "UMLS:C0227637") AnnotationAssertion( "galen:CapsuleOfKidney") AnnotationAssertion(Annotation( "FMA:66610") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "capsula fibrosa renis") AnnotationAssertion( "capsule of kidney") AnnotationAssertion(Annotation( "FMA:66610") "fibrous capsule of kidney") AnnotationAssertion(Annotation( "GO:0072127") "renal capsule") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002015") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "kidney capsule") AnnotationAssertion( "Illu:kidney.jpg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pulmonary vein) AnnotationAssertion(Annotation( "GO:0060577") "Pulmonary veins are blood vessels that transport blood from the lungs to the heart[GO].") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0010521") Annotation( "AAO"^^xsd:string) Annotation( "AAO:BJB"^^xsd:string) "Any of the veins which collect blood from the lungs and some small vesicles received from the esophagus.[AAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001133") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( ) "One of two pairs of large vessels that return oxygenated blood from each lung to the left atrium of the heart. [TFD][VHOG]") AnnotationAssertion(Annotation( "MP:0002726,MGI:cwg") "the veins that return oxygenated blood from the lungs to the left atrium of the heart") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001133") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0030223693 Liem KF, Bemis WE, Walker WF, Grande L, Functional Anatomy of the Vertebrates: An Evolutionary Perspective (2001) p.620") "On the other hand, in the sister clade of the actinopterygians, the sarcopterygians, the gill circulation is supplemented with lung ventilation. As a result, the pulmonary artery and vein and a functional ductus arteriosus arose as a major evolutionary innovation from the sixth arch, giving the organism a flexible shunt to balance blood supply to and from gills and lungs according to environmental conditions.[well established][VHOG]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010521") AnnotationAssertion( "BTO:0001799") AnnotationAssertion( "CALOHA:TS-0840") AnnotationAssertion( "EHDAA2:0001579") AnnotationAssertion( "EHDAA:2629") AnnotationAssertion( "EMAPA:18645") AnnotationAssertion( "FMA:66643") AnnotationAssertion( "GAID:543") AnnotationAssertion( "MA:0002206") AnnotationAssertion( "MESH:D011667") AnnotationAssertion( "NCIT:C12776") AnnotationAssertion(Annotation( "ncithesaurus:Pulmonary_Vein") "UMLS:C0034090") AnnotationAssertion( "VHOG:0001133") AnnotationAssertion( "XAO:0000394") AnnotationAssertion( "galen:PulmonaryVein") AnnotationAssertion( "pulmonary venous tree organ part") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "venae pulmonales") AnnotationAssertion( "UBERON:0002016") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "pulmonary vein") AnnotationAssertion( "Alveoli:diagram.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (portal vein) AnnotationAssertion(Annotation( "BTO:0001792") "A vein that conducts blood from the digestive organs, spleen, pancreas, and gallbladder to the liver[BTO].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0001792") AnnotationAssertion( "CALOHA:TS-0814") AnnotationAssertion( "EHDAA2:0001485") AnnotationAssertion( "EHDAA:6510") AnnotationAssertion( "EMAPA:17349") AnnotationAssertion( "FMA:66645") AnnotationAssertion( "GAID:540") AnnotationAssertion( "MA:0002198") AnnotationAssertion( "MESH:D011169") AnnotationAssertion( "NCIT:C33343") AnnotationAssertion( "OpenCyc:Mx4rv_bem5wpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Portal_Vein") "UMLS:C0032718") AnnotationAssertion( "VHOG:0000656") AnnotationAssertion( "XAO:0000392") AnnotationAssertion( "galen:PortalVein") AnnotationAssertion(Annotation( "FMA:66645") "portal venous tree organ part") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002017") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "portal vein") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/3/33/Gray591.png"^^xsd:anyURI) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (synovial membrane of synovial joint) AnnotationAssertion(Annotation( ) "Soft tissue that lines the non-cartilaginous surfaces within joints with cavities (synovial joints).") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001282") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "PMID:11068553 O'Connel JX, Pathology of the synovium. American Journal of Clinical Pathology (2000)") "Phylogenetically, synovium is one of the newer attributes of the vertebrate locomotor apparatus. The first synovial joints developed in the piscine jaw of ancestors of modern lungfish by an evolutionary process that modified preexisting fibrous and cartilaginous joints, which were the predominant articulation of the early sea- and land-dwelling vertebrates.[well established][VHOG]") AnnotationAssertion(Annotation( "FMA:66762") "synovial layer") AnnotationAssertion(Annotation( "AEO:0000181") "synovial membrane") AnnotationAssertion(Annotation( "BTO:0001823") Annotation( "VHOG:0001282") "synovium") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AEO:0000181") AnnotationAssertion( "BTO:0001823") AnnotationAssertion( "EFO:0001393") AnnotationAssertion( "EHDAA2_RETIRED:0003181") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37476") AnnotationAssertion( "EV:0100143") AnnotationAssertion( "FMA:9865") AnnotationAssertion( "GAID:264") AnnotationAssertion( "MA:0000114") AnnotationAssertion( "MESH:D013583") AnnotationAssertion( "NCIT:C12473") AnnotationAssertion(Annotation( "ncithesaurus:Synovial_Membrane") "UMLS:C0039099") AnnotationAssertion( "VHOG:0001282") AnnotationAssertion( "galen:SynovialMembrane") AnnotationAssertion(Annotation( "FMA:9865") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "membrana synovialis (capsula articularis)") AnnotationAssertion(Annotation( ) Annotation( ) "membrana synovialis capsulae articularis") AnnotationAssertion(Annotation( "FMA:66762") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "stratum synoviale") AnnotationAssertion(Annotation( "FMA:9865") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "stratum synoviale (capsula articularis)") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:9865") "synovial layer of articular capsule of synovial joint") AnnotationAssertion(Annotation( "FMA:9865") "synovial membrane of articular capsule of synovial joint") AnnotationAssertion(Annotation( "FMA:9865") "synovium of articular capsule of synovial joint") AnnotationAssertion( "UBERON:0002018") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "synovial membrane of synovial joint") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/1/19/Joint.png"^^xsd:anyURI) AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/5/5d/Synovium.png"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "GAID") ObjectSomeValuesFrom( )) # Class: (accessory XI nerve) AnnotationAssertion(Annotation( ) Annotation( "BIRNLEX:812") "A cranial nerve that originates from neurons in the medulla and in the cervical spinal cord.") AnnotationAssertion(Annotation( "http://code.google.com/p/xenopus-anatomy-ontology/issues/detail?id=7") Annotation( "VHOG"^^xsd:string) Annotation( "Wikipedia"^^xsd:string) ) AnnotationAssertion(Annotation( "ISBN:080184780X") Annotation( "XAO:0004214") "A small motor nerve which emerges from the lateral wall of the medulla with the roots of the vagus nerve, and innervates a single pectoral suspensory muscle, the m.cucullaris.") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000699") Annotation( "VHOG"^^xsd:string) Annotation( ) "Cranial nerve that innervates the sternocleidomastoid and trapezius complex of muscles. [Bemis_WE, Functional_Anatomy_of_the_Vertebrates:_An_Evolutionary_Perspective, Glossary_G-1, Grande_L, Liem_KF, Third_Edition_(2001)_Orlando_Fla.:_Harcourt_College_Publishers, Walker_WF][VHOG]") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0010476") Annotation( "AAO"^^xsd:string) Annotation( "AAO:EJS"^^xsd:string) "Small motor nerve which innervates a single pectoral suspensory muscle, the m. cucullaris.[AAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000699") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( ) "Cranial nerves XI and XII evolved in the common ancestor to amniotes (non-amphibian tetrapods) thus totalling twelve pairs.[well established][VHOG]") AnnotationAssertion(Annotation( "GO"^^xsd:string) "In mice, the spinal branch of this motor nerve innervates the trapezius and the sternocleidomastoid muscles. The cranial branch joins the vagus nerve and innervates the same targets as the vagus nerve") AnnotationAssertion(Annotation( "FMA"^^xsd:string) "FMA has distinct cranial and spinal parts - WP says 'Traditional descriptions of the accessory nerve divide it into two parts: a spinal part and a cranial part.[1] However, because the cranial component rapidly joins the vagus nerve, becoming an integral part of said nerve, modern descriptions often consider the cranial component to be part of the vagus nerve and not part of the accessory nerve proper.[2]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010476") AnnotationAssertion( "BAMS:11n") AnnotationAssertion( "BAMS:XIn") AnnotationAssertion( "BIRNLEX:812") AnnotationAssertion( "EHDAA2:0000106") AnnotationAssertion( "EHDAA:2855") AnnotationAssertion( "EMAPA:17265") AnnotationAssertion( "FMA:6720") AnnotationAssertion( "FMA:80284") AnnotationAssertion( "GAID:825") AnnotationAssertion( "HBA:9340") AnnotationAssertion( "MA:0001088") AnnotationAssertion( "MBA:717") AnnotationAssertion( "MESH:D000055") AnnotationAssertion( "NCIT:C32041") AnnotationAssertion( "OpenCyc:Mx4rwTEwI5wpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "BIRNLEX:812") "UMLS:C0000905") AnnotationAssertion(Annotation( "ncithesaurus:Accessory_Nerve") "UMLS:C0000905") AnnotationAssertion(Annotation( "BIRNLEX:812") "UMLS:C1305777") AnnotationAssertion( "VHOG:0000699") AnnotationAssertion( "XAO:0004214") AnnotationAssertion( "Willis' nerve") AnnotationAssertion(Annotation( "EHDAA2:0000106") "accessory XI") AnnotationAssertion( "accessory XI nerve") AnnotationAssertion( "accessory nerve") AnnotationAssertion( "accessory nerve [XI]") AnnotationAssertion( "cervical accessory nerve") AnnotationAssertion(Annotation( "BIRNLEX:812") "cranial nerve XI") AnnotationAssertion(Annotation( "BIRNLEX:812") "eleventh cranial nerve") AnnotationAssertion(Annotation( "FMA:6720") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "nervus accessorius [XI]") AnnotationAssertion(Annotation( "FMA:6720") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "pars spinalis nervus accessorius") AnnotationAssertion(Annotation( "FMA:6720") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "radix spinalis nervus accessorius") AnnotationAssertion(Annotation( "FMA:6720") "spinal accessory nerve") AnnotationAssertion( "spinal accessory nerve tree") AnnotationAssertion( "spinal part of accessory nerve") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "VHOG:0000699") "CN-XI") AnnotationAssertion(Annotation( "BAMS:XIn") "accessory spinal nerve") AnnotationAssertion( "UBERON:0002019") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "accessory XI nerve") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/5/5e/Gray791.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (gray matter) AnnotationAssertion(Annotation( ) Annotation( ) "A nervous system structure composed primarily of nerve cell bodies (somas). May also include dendrites and the initial unmyelinated portion of axons.") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0002197") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "Multi-tissue comprised of neurons, dendrites, axon terminals, glial cells, and capillaries.[TAO]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AEO:0001012") AnnotationAssertion( "EHDAA2:0003136") AnnotationAssertion( "EHDAA2_RETIRED:0004658") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37596") AnnotationAssertion( "FMA:67242") AnnotationAssertion( "HBA:4006") AnnotationAssertion( "MA:0001112") AnnotationAssertion( "NCIT:C32695") AnnotationAssertion( "OpenCyc:Mx4rwDdKMpwpEbGdrcN5Y29ycA") AnnotationAssertion( "TAO:0002197") AnnotationAssertion(Annotation( "ncithesaurus:Gray_Matter") "UMLS:C0018220") AnnotationAssertion( "VHOG:0001768") AnnotationAssertion( "ZFA:0001681") AnnotationAssertion( "gray matter") AnnotationAssertion(Annotation( "FMA:67242") "gray matter of neuraxis") AnnotationAssertion( "grey matter") AnnotationAssertion( "grey matter of neuraxis") AnnotationAssertion( "grey substance") AnnotationAssertion(Annotation( "AEO:0001012") "neuronal grey matter") AnnotationAssertion(Annotation( "FMA:67242") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "substantia grisea") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "ZFA:0001681") "gray mater") AnnotationAssertion(Annotation( ) "grisea") AnnotationAssertion( "UBERON:0002020") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "gray matter") AnnotationAssertion( "Spinal:nerve.svg"^^xsd:anyURI) SubClassOf( ) # Class: (occipital lobe) AnnotationAssertion(Annotation( "BIRNLEX:1136") "Posterior part of the cerebral hemisphere (MSH).") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:OL") AnnotationAssertion( "BAMS:Occipital_lobe") AnnotationAssertion( "BIRNLEX:1136") AnnotationAssertion( "BTO:0000293") AnnotationAssertion( "CALOHA:TS-0693") AnnotationAssertion( "DHBA:12148") AnnotationAssertion( "EFO:0000915") AnnotationAssertion( "EV:0100170") AnnotationAssertion( "FMA:67325") AnnotationAssertion( "GAID:678") AnnotationAssertion( "HBA:4180") AnnotationAssertion( "MAT:0000507") AnnotationAssertion( "MESH:A08.186.211.730.885.213.571") AnnotationAssertion( "NCIT:C12355") AnnotationAssertion( "OpenCyc:Mx4rv9OFy5wpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "BIRNLEX:1136") "UMLS:C0028785") AnnotationAssertion(Annotation( "ncithesaurus:Occipital_Lobe") "UMLS:C0028785") AnnotationAssertion(Annotation( "BIRNLEX:1136") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=140") AnnotationAssertion(Annotation( "FMA:67325") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "regio occipitalis") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "lobus occipitalis") AnnotationAssertion( "UBERON:0002021") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "occipital lobe") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/8/8c/Gray727_occipital_lobe.png"^^xsd:anyURI) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (insula) AnnotationAssertion(Annotation( "BIRNLEX:1117") "Gray matter of the insular region of the neocortex. In gyrencephalic animals, it is part of the insular lobe and lies in the depths of the lateral fissure and covered by portions of the frontal, parietal and temporal lobes. It includes Brodmann areas 13-16.") AnnotationAssertion( "Consider splitting insular cortex from insular lobe. See https://github.com/obophenotype/uberon/issues/412") AnnotationAssertion(Annotation( "ncit"^^xsd:string) "two classes in ncit, Central_Lobe is part of temporal lobe") AnnotationAssertion( "UBERON:0023846") AnnotationAssertion(Annotation( "FMA:67329") Annotation( "FMA:CMA") Annotation( ) "iNS") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:AI") AnnotationAssertion( "BAMS:Ins") AnnotationAssertion( "BIRNLEX:1117") AnnotationAssertion( "BTO:0001105") AnnotationAssertion( "DHBA:12176") AnnotationAssertion( "EV:0100172") AnnotationAssertion( "FMA:67329") AnnotationAssertion( "HBA:4268") AnnotationAssertion( "NCIT:C32278") AnnotationAssertion( "NLX:11342") AnnotationAssertion( "OpenCyc:Mx4rvpK5WZwpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "BIRNLEX:1117") "UMLS:C0021640") AnnotationAssertion(Annotation( "BIRNLEX:1117") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=111") AnnotationAssertion( "ncithesaurus:Insula") AnnotationAssertion(Annotation( "FMA:67329") "central lobe") AnnotationAssertion(Annotation( "FMA:67329") "cortex of island") AnnotationAssertion(Annotation( "FMA:67329") "insula lobule") AnnotationAssertion(Annotation( "FMA:67329") "insular lobe") AnnotationAssertion(Annotation( "NLX:11342") "insular lobe") AnnotationAssertion(Annotation( "FMA:67329") "insular region") AnnotationAssertion(Annotation( "FMA:67329") "island of Reil") AnnotationAssertion(Annotation( "FMA:67329") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "lobus insularis") AnnotationAssertion(Annotation( "BIRNLEX:1117") "insular cortex") AnnotationAssertion(Annotation( "FMA:67329") "insular cortex") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:111") Annotation( ) "cortex insularis") AnnotationAssertion(Annotation( "NeuroNames:111") Annotation( ) "insula Reilii") AnnotationAssertion(Annotation( "NeuroNames:111") Annotation( ) "insula cerebri") AnnotationAssertion(Annotation( "NeuroNames:111") "insula of Reil") AnnotationAssertion(Annotation( "NeuroNames:111") "insular gyrus") AnnotationAssertion(Annotation( "BTO:0001105") "insulary cortex") AnnotationAssertion(Annotation( "NeuroNames:111") "morphological insula") AnnotationAssertion( "UBERON:0002022") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "insula") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/2/2b/Gray731.png"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "BTO"^^xsd:string) Annotation( "NIF"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (claustrum of brain) AnnotationAssertion(Annotation( ) Annotation( "BTO:0004292") "One of the four basal ganglia in each cerebral hemisphere that consists of a thin lamina of gray matter between the lentiform nucleus and the insula[BTO]. The claustrum, which is suspected to be present in all mammals, is a fairly thin (fraction of 1 mm to multiple mms) vertical curved sheet of subcortical gray matter oriented sagittally between the white matter tracts of the external capsule and extreme capsule. The claustrum is lateral to the putamen and medial to the insular cortex and is considered by some sources to be part of the basal ganglia. There are lateral and medial tracts connecting to many cortices and perhaps to the hippocampus, the amygdala, and the caudate nucleus (connections with subcortical centers are a matter of debate)[WP].") AnnotationAssertion(Annotation( "Wikipedia"^^xsd:string) ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:CL") AnnotationAssertion( "BAMS:CLA") AnnotationAssertion( "BAMS:Cl") AnnotationAssertion( "BIRNLEX:1522") AnnotationAssertion( "BM:Tel-Cl") AnnotationAssertion( "BTO:0004292") AnnotationAssertion( "DHBA:10346") AnnotationAssertion( "DMBA:15984") AnnotationAssertion( "EMAPA:35244") AnnotationAssertion( "EV:0100183") AnnotationAssertion( "FMA:67440") AnnotationAssertion( "HBA:4321") AnnotationAssertion( "MA:0000888") AnnotationAssertion( "MBA:583") AnnotationAssertion( "NCIT:C32329") AnnotationAssertion( "PBA:128012960") AnnotationAssertion(Annotation( "BIRNLEX:1522") "UMLS:C0008910") AnnotationAssertion(Annotation( "ncithesaurus:Claustrum") "UMLS:C0008910") AnnotationAssertion(Annotation( "BIRNLEX:1522") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=252") AnnotationAssertion(Annotation( "MA:0000888") "claustrum") AnnotationAssertion(Annotation( "FMA:67440") "dorsal claustrum") AnnotationAssertion(Annotation( "FMA:67440") "dorsal portion of claustrum") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:252") "claustrum (Burdach)") AnnotationAssertion( "UBERON:0002023") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "claustrum of brain") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/9/91/Telencephalon-Horiconatal.jpg"^^xsd:anyURI) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ) SubClassOf(Annotation( "ISBN:0471888893"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "NIF"^^xsd:string) ObjectSomeValuesFrom( )) DisjointClasses(Annotation( "NIFSTD"^^xsd:string) ) # Class: (internal carotid nerve plexus) AnnotationAssertion(Annotation( ) "The internal carotid plexus (carotid plexus) is situated on the lateral side of the internal carotid artery, and in the plexus there occasionally exists a small gangliform swelling, the carotid ganglion, on the under surface of the artery. Postganglionic sympathetic fibres ascend from the superior cervical ganglion, along the walls of the internal carotid artery, to enter the internal carotid plexus. These fibres then distribute to deep structures, which include the levator palpebrae superioris and pupillary dilator muscles. Some of the fibres from the internal carotid plexus converge to form the deep petrosal nerve. The internal carotid plexus communicates with the semilunar ganglion, the abducent nerve, and the sphenopalatine ganglion; it distributes filaments to the wall of the carotid artery, and also communicates with the tympanic branch of the glossopharyngeal nerve. [WP,unvetted].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37618") AnnotationAssertion( "FMA:67533") AnnotationAssertion( "MA:0001162") AnnotationAssertion( "NCIT:C52746") AnnotationAssertion(Annotation( "ncithesaurus:Internal_Carotid_Nerve_Plexus") "UMLS:C0459526") AnnotationAssertion( "internal carotid plexus") AnnotationAssertion(Annotation( "FMA:67533") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "plexus caroticus internus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002024") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "internal carotid nerve plexus") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/a/a5/Gray840.png"^^xsd:anyURI) SubClassOf( ) # Class: (stratum basale of epidermis) AnnotationAssertion(Annotation( "ISBN:0-683-40008-8"^^xsd:string) Annotation( "MP:0001231") "The deepest layer of the epidermis, which is composed of dividing stem cells and anchoring cells.") AnnotationAssertion( "replaces damaged cells on outside of body") AnnotationAssertion( "consisting of non-keratinized, viable cells, in contrast to the outer (upper) layer of epidermis made up of keratinized, anucleated, non-viable cells") AnnotationAssertion(Annotation( ) "Malpighian layer") AnnotationAssertion(Annotation( ) "rete Malphighii") AnnotationAssertion( "rete Malpighii") AnnotationAssertion(Annotation( ) Annotation( ) "stratum Malpighi") AnnotationAssertion( "stratum basale") AnnotationAssertion( "stratum germinosum") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010598") AnnotationAssertion( "BTO:0000438") AnnotationAssertion( "EMAPA:32779") AnnotationAssertion( "FMA:67540") AnnotationAssertion( "MA:0000803") AnnotationAssertion( "NCIT:C33466") AnnotationAssertion( "NCIT:C33623") AnnotationAssertion( "TAO:0001180") AnnotationAssertion(Annotation( "ncithesaurus:Stratum_Basale") "UMLS:C0221925") AnnotationAssertion( "XAO:0000041") AnnotationAssertion( "ZFA:0001180") AnnotationAssertion(Annotation( "FMA:67540") "basal cell layer of epidermis") AnnotationAssertion(Annotation( "ZFA:0001180") "basal epidermal layer") AnnotationAssertion(Annotation( "TAO:0001180") "epidermal basal stratum") AnnotationAssertion( "epidermis stratum basale") AnnotationAssertion( "stratum basalis of epidermis") AnnotationAssertion( "stratum germinativum") AnnotationAssertion( "stratum germinosum of epidermis") AnnotationAssertion( "uberon") AnnotationAssertion( "basal cell layer of skin") AnnotationAssertion( "basal layer of epidermis") AnnotationAssertion( "epidermis basal layer") AnnotationAssertion(Annotation( "XAO:0000041") "epidermis sensorial layer") AnnotationAssertion( "epidermis stratum germinativum") AnnotationAssertion( "UBERON:0002025") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "stratum basale of epidermis") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (stratum spinosum of epidermis) AnnotationAssertion(Annotation( "ISBN:0-683-40008-8"^^xsd:string) Annotation( "MP:0001236") "The layer of polyhedral cells in the epidermis found between the stratum granulosum and stratum basale; shrinkage and adhesion of these cells gives a spiny or prickly appearance.") AnnotationAssertion( "Has cells that produce and secrete bipolar lipids which prevent evaporation, helping to 'water-proof' the skin. Keratinization begins in the stratum spinosum. [Wikipedia:Stratum_spinosum]") AnnotationAssertion(Annotation( ) "Malpighian layer") AnnotationAssertion(Annotation( ) Annotation( ) "stratum Malpighii") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0000435") AnnotationAssertion( "EMAPA:32785") AnnotationAssertion( "FMA:67542") AnnotationAssertion( "MA:0000807") AnnotationAssertion( "NCIT:C12850") AnnotationAssertion(Annotation( "ncithesaurus:Stratum_Spinosum") "UMLS:C0221924") AnnotationAssertion( "epidermis stratum spinosum") AnnotationAssertion(Annotation( "FMA:67542") "prickle cell layer of epidermis") AnnotationAssertion( "squamous cell layer of epidermis") AnnotationAssertion( "stratum spinosum") AnnotationAssertion( "uberon") AnnotationAssertion( "epidermis prickle cell layer") AnnotationAssertion(Annotation( "BTO:0000435") "prickle cell layer") AnnotationAssertion( "UBERON:0002026") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "stratum spinosum of epidermis") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (stratum corneum of epidermis) AnnotationAssertion(Annotation( "ISBN:0-683-40008-8"^^xsd:string) Annotation( "MP:0001240") "The outer layer of the epidermis, consisting of several layers of flat keratinized non-nucleated cells.") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0010597") Annotation( "AAO"^^xsd:string) Annotation( "AAO:CAM") "The keratinized outermost layer of the epidermis, which is periodically shed.[AAO]") AnnotationAssertion( "some oral epitehlium also has cornified layer / stratum corneum") AnnotationAssertion(Annotation( "BTO:0000344") "horny layer") AnnotationAssertion( "keratinized squame layer") AnnotationAssertion( "stratum corneum") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010597") AnnotationAssertion( "BTO:0000344") AnnotationAssertion( "CALOHA:TS-0981") AnnotationAssertion( "EMAPA:32787") AnnotationAssertion( "FMA:67545") AnnotationAssertion( "MA:0000804") AnnotationAssertion( "NCIT:C33625") AnnotationAssertion(Annotation( "ncithesaurus:Stratum_Corneum") "UMLS:C0221921") AnnotationAssertion( "cornified layer") AnnotationAssertion( "epidermis stratum corneum") AnnotationAssertion(Annotation( "FMA:67545") "horny layer of epidermis") AnnotationAssertion( "keratinized squame layer of epidermis") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "stratum corneum epidermidis") AnnotationAssertion( "UBERON:0002027") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "stratum corneum of epidermis") AnnotationAssertion( "Epidermal:layers.png"^^xsd:anyURI) AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/2/20/Skinlayers.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (hindbrain) AnnotationAssertion(Annotation( ) Annotation( "ZFA:0000029") Annotation( "ZFIN:curator"^^xsd:string) "The most posterior of the three principal regions of the brain. In mammals and birds the hindbrain is divided into a rostral metencephalon and a caudal myelencephalon. In zebrafish, with the exception of the cerebellum, the ventral remainder of the metencephalon can be separated only arbitrarily from the more caudal myelencephalic portion of the medulla oblongata (From: Neuroanatomy of the Zebrafish Brain)[ZFA]. Organ component of neuraxis that has as its parts the pons, cerebellum and medulla oblongata[FMA].") AnnotationAssertion(Annotation( ) ) AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0010150") Annotation( "AAO"^^xsd:string) Annotation( "AAO:BJB"^^xsd:string) "Posterior part of the brain consisting of the cerebellum and medulla oblongata.[AAO]") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0000029") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "The most posterior of the three principal regions of the brain, forming the rhombencephalon and all or most of the metencephalon. Kimmel et al, 1995.[TAO]") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0000029") Annotation( "TAO"^^xsd:string) "relationship loss: develops_from hindbrain neural tube (TAO:0007043)[TAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000070") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "DOI:10.1016/S0959-4388(99)00003-3 Holland LZ and Holland ND, Chordate origins of the vertebrate central nervous system. Current Opinion in Neurobiology (1999)") "Fine structural, computerized three-dimensional (3D) mapping of cell connectivity in the amphioxus nervous system and comparative molecular genetic studies of amphioxus and tunicates have provided recent insights into the phylogenetic origin of the vertebrate nervous system. The results suggest that several of the genetic mechanisms for establishing and patterning the vertebrate nervous system already operated in the ancestral chordate and that the nerve cord of the proximate invertebrate ancestor of the vertebrates included a diencephalon, midbrain, hindbrain, and spinal cord.[well established][VHOG]") AnnotationAssertion( "rhombencephalic") AnnotationAssertion(Annotation( "MA"^^xsd:string) "in MA, brainstem and hindbrain and part-of siblings under brain, consistent with FMA and NIF. See also notes for cerebellum. We weaken the relation in ABA to overlaps") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010150") AnnotationAssertion( "BAMS:HB") AnnotationAssertion( "BIRNLEX:942") AnnotationAssertion( "BTO:0000672") AnnotationAssertion( "CALOHA:TS-0457") AnnotationAssertion( "DHBA:10653") AnnotationAssertion( "DMBA:16808") AnnotationAssertion( "EFO:0000923") AnnotationAssertion( "EHDAA2:0000746") AnnotationAssertion( "EHDAA:3514") AnnotationAssertion( "EHDAA:6487") AnnotationAssertion( "EMAPA:16916") AnnotationAssertion( "FMA:67687") AnnotationAssertion( "MA:0000195") AnnotationAssertion( "MAT:0000107") AnnotationAssertion( "MBA:1065") AnnotationAssertion( "MESH:D012249") AnnotationAssertion( "MIAA:0000107") AnnotationAssertion( "NCIT:C40336") AnnotationAssertion( "TAO:0000029") AnnotationAssertion(Annotation( "BIRNLEX:942") "UMLS:C0035507") AnnotationAssertion(Annotation( "ncithesaurus:Hind-Brain") "UMLS:C0035507") AnnotationAssertion(Annotation( "BIRNLEX:942") "UMLS:C1522180") AnnotationAssertion( "VHOG:0000070") AnnotationAssertion( "XAO:0000015") AnnotationAssertion( "ZFA:0000029") AnnotationAssertion(Annotation( "BIRNLEX:942") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=540") AnnotationAssertion( "uberon") AnnotationAssertion( "rhombencephalon") AnnotationAssertion( "UBERON:0002028") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "hindbrain") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/5/54/EmbryonicBrain.svg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "modified-source-relation") Annotation( "ABA"^^xsd:string) ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "Bgee:AN"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (epithelium of gall bladder) AnnotationAssertion(Annotation( "MP:0009492") "The simple columnar epithelial lining of the gall bladder.") AnnotationAssertion( ) AnnotationAssertion( "BTO:0001449") AnnotationAssertion( "CALOHA:TS-1304") AnnotationAssertion( "EMAPA:35370") AnnotationAssertion( "FMA:67711") AnnotationAssertion( "MA:0001632") AnnotationAssertion( "NCIT:C49227") AnnotationAssertion(Annotation( "ncithesaurus:Gallbladder_Epithelium") "UMLS:C1180206") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelial tissue of gall bladder") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelial tissue of gallbladder") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelium of gallbladder") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "gall bladder epithelial tissue") AnnotationAssertion( "gall bladder epithelium") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "gallbladder epithelial tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "gallbladder epithelium") AnnotationAssertion( "uberon") AnnotationAssertion( "biliary epithelium") AnnotationAssertion( "UBERON:0002029") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "epithelium of gall bladder") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (nipple) AnnotationAssertion(Annotation( ) Annotation( "FMA:67771") "Projection of skin containing the outlets for 15-20 lactiferous ducts arranged cylindrically around the tip.") AnnotationAssertion( "a male mouse has no nipples - mammary tissue regresses during embryonic development") AnnotationAssertion(Annotation( "FMA"^^xsd:string) "FMA makes this part of the breast, whereas in MA it is part of the mammary gland -") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0000821") AnnotationAssertion( "CALOHA:TS-2234") AnnotationAssertion( "EMAPA:36508") AnnotationAssertion( "FMA:67771") AnnotationAssertion( "GAID:35") AnnotationAssertion( "MA:0000796") AnnotationAssertion( "MESH:D009558") AnnotationAssertion( "NCIT:C12299") AnnotationAssertion( "OpenCyc:Mx4rvVjKi5wpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Nipple") "UMLS:C0028109") AnnotationAssertion( "galen:Nipple") AnnotationAssertion(Annotation( "MP:0009723") "papilla mammae") AnnotationAssertion( "papilla of breast") AnnotationAssertion(Annotation( "MP:0009723") "thele") AnnotationAssertion(Annotation( "MP:0009723") "thelium") AnnotationAssertion( "papillary part of breast") AnnotationAssertion( "teat") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "papilla mammaria") AnnotationAssertion( "UBERON:0002030") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "nipple") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/5/59/Female_nipple_profile.jpg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "Stedmans") ObjectSomeValuesFrom( )) # Class: (epithelium of bronchus) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An epithelium that is part of a bronchus [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( "BTO:0001845") AnnotationAssertion( "CALOHA:TS-1240") AnnotationAssertion( "EFO:0000307") AnnotationAssertion( "EMAPA:32691") AnnotationAssertion( "FMA:67782") AnnotationAssertion( "MA:0001839") AnnotationAssertion( "NCIT:C32231") AnnotationAssertion(Annotation( "ncithesaurus:Bronchial_Epithelium") "UMLS:C0599333") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bronchi epithelial tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bronchi epithelium") AnnotationAssertion( "bronchial epithelium") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bronchial trunk epithelial tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bronchial trunk epithelium") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bronchus epithelial tissue") AnnotationAssertion( "bronchus epithelium") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelial tissue of bronchi") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelial tissue of bronchial trunk") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelial tissue of bronchus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelium of bronchi") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelium of bronchial trunk") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002031") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "epithelium of bronchus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (areola) AnnotationAssertion(Annotation( "FMA:67796") "Subdivision of breast which consists of skin, connective tissue and smooth muscle bundle and modified sebaceous glands and which surrounds the nipple.") AnnotationAssertion( "areolar") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:67796") AnnotationAssertion( "MA:0000788") AnnotationAssertion( "NCIT:C12368") AnnotationAssertion( "OpenCyc:Mx4rvrcOL5wpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Areola") "UMLS:C0222608") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "areola mammae") AnnotationAssertion(Annotation( ) "areolae") AnnotationAssertion( "UBERON:0002032") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "areola") AnnotationAssertion( "Female:Areola.jpg"^^xsd:anyURI) AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/f/f4/Brustwarze.JPG"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "MA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (arrector muscle of hair) AnnotationAssertion(Annotation( ) "A tiny smooth muscle that connects the hair follicle with the dermis.") AnnotationAssertion( "When contracted the arrector pili causes the raising of the hair") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0005132") AnnotationAssertion( "EMAPA:26775") AnnotationAssertion( "FMA:67821") AnnotationAssertion( "MA:0000778") AnnotationAssertion(Annotation( "FMA:67821") Annotation( "MA:0000778") Annotation( ) "arrector pili") AnnotationAssertion(Annotation( "EMAPA:26779") Annotation( "MP:0010679") Annotation( ) "arrector pili muscle") AnnotationAssertion(Annotation( "MA:0000778") Annotation( ) "arrector pili smooth muscle") AnnotationAssertion(Annotation( "MP:0010679") Annotation( ) "arrector pilli") AnnotationAssertion(Annotation( "MP:0010679") Annotation( ) "arrector pilli muscle") AnnotationAssertion(Annotation( "ISBN:0123813611"^^xsd:string) "arrector pilorum") AnnotationAssertion(Annotation( "ISBN:0123813611"^^xsd:string) "arrector pilorum muscle of hair") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0005132") "arectores pilorum") AnnotationAssertion(Annotation( "BTO:0005132") Annotation( ) "erector pili") AnnotationAssertion(Annotation( "BTO:0005132") "erectores pilorum") AnnotationAssertion(Annotation( "BTO:0005132") "pilomotor muscle") AnnotationAssertion( "UBERON:0002033") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "arrector muscle of hair") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (suprachiasmatic nucleus) AnnotationAssertion(Annotation( "BIRNLEX:1325") "* An ovoid densely packed collection of small cells of the anterior hypothalamus lying close to the midline in a shallow impression of the optic chiasm. (MSH) * small group of nerve cell bodies in the supraoptic region of the hypothalamus, just above the optic chiasm; influences rhythmic aspects of hypothalamic functions in many vertebrate species. (CSP).") AnnotationAssertion(Annotation( "BIRNLEX:1325") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "SCN") AnnotationAssertion(Annotation( "BIRNLEX:1325") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "SCh") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:SCH") AnnotationAssertion( "BAMS:SCh") AnnotationAssertion( "BIRNLEX:1325") AnnotationAssertion( "BM:Die-Hy-SCN") AnnotationAssertion( "BTO:0001822") AnnotationAssertion( "CALOHA:TS-0992") AnnotationAssertion( "DHBA:10480") AnnotationAssertion( "DMBA:15660") AnnotationAssertion( "EFO:0002475") AnnotationAssertion( "EMAPA:35841") AnnotationAssertion( "EV:0100228") AnnotationAssertion( "FMA:67883") AnnotationAssertion( "GAID:645") AnnotationAssertion( "HBA:12908") AnnotationAssertion( "MA:0000843") AnnotationAssertion( "MBA:286") AnnotationAssertion( "MESH:A08.186.211.730.385.357.342.625") AnnotationAssertion( "NCIT:C74537") AnnotationAssertion( "TAO:0000441") AnnotationAssertion(Annotation( "BIRNLEX:1325") "UMLS:C0038866") AnnotationAssertion(Annotation( "ncithesaurus:Suprachiasmatic_Nucleus") "UMLS:C0038866") AnnotationAssertion(Annotation( "BIRNLEX:1325") "UMLS:C1289559") AnnotationAssertion( "VHOG:0000036") AnnotationAssertion( "XAO:0004072") AnnotationAssertion( "ZFA:0000441") AnnotationAssertion(Annotation( "BIRNLEX:1325") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=384") AnnotationAssertion( "suprachiasmatic nucleus of hypothalamus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0001822") "SCN") AnnotationAssertion(Annotation( ) Annotation( ) "nucleus suprachiasmaticus") AnnotationAssertion(Annotation( "NeuroNames:384") Annotation( ) "nucleus suprachiasmaticus hypothalami") AnnotationAssertion(Annotation( "NeuroNames:384") "suprachiasmatic nucleus (Spiegel-Zwieg)") AnnotationAssertion( "UBERON:0002034") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "suprachiasmatic nucleus") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/8/8c/HypothalamicNuclei.PNG"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (medial preoptic nucleus) AnnotationAssertion(Annotation( ) Annotation( ) "The medial preoptic nucleus is bounded laterally by the lateral preoptic nucleus, and medially by the preoptic periventricular nucleus. It releases gonadotropin-releasing hormone, controls copulation in males, and is larger in males than in females.[WP,unvetted].") AnnotationAssertion(Annotation( "BIRNLEX:706") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "MPO") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:MPO") AnnotationAssertion( "BIRNLEX:706") AnnotationAssertion( "DHBA:10470") AnnotationAssertion( "DMBA:15604") AnnotationAssertion( "EMAPA:35549") AnnotationAssertion( "FMA:67890") AnnotationAssertion( "HBA:4544") AnnotationAssertion( "MA:0000840") AnnotationAssertion( "MBA:515") AnnotationAssertion(Annotation( "BIRNLEX:706") "UMLS:C0175313") AnnotationAssertion(Annotation( "BIRNLEX:706") "UMLS:C1289555") AnnotationAssertion(Annotation( "BIRNLEX:706") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=380") AnnotationAssertion( "medial preoptic hypothalamic nucleus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:380") Annotation( ) "area praeoptica medialis") AnnotationAssertion(Annotation( "NeuroNames:380") Annotation( ) "area preopticus medialis") AnnotationAssertion(Annotation( "NeuroNames:380") Annotation( ) "nucleus praeopticus medialis") AnnotationAssertion(Annotation( "NeuroNames:380") Annotation( ) "nucleus preopticus medialis") AnnotationAssertion( "UBERON:0002035") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "medial preoptic nucleus") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/8/8c/HypothalamicNuclei.PNG"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "MA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (striated muscle tissue) AnnotationAssertion(Annotation( "CL:0000737") Annotation( "GOC:dph") Annotation( "GOC:mtg_muscle") "Muscle tissue that contains fibers that are divided by transverse bands into striations.") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0010762") Annotation( "AAO"^^xsd:string) Annotation( "AAO:CAM") "Voluntary muscle tissue arranged in bundles of fibers.[AAO]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010762") AnnotationAssertion( "AEO:0000140") AnnotationAssertion( "CALOHA:TS-2047") AnnotationAssertion( "EHDAA2:0003140") AnnotationAssertion( "EMAPA:36390") AnnotationAssertion( "FMA:67905") AnnotationAssertion( "MA:0002438") AnnotationAssertion( "NCIT:C12436") AnnotationAssertion( "OpenCyc:Mx4rwAoze5wpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Striated_Muscle_Tissue") "UMLS:C1331262") AnnotationAssertion( "WBbt:0005779") AnnotationAssertion( "galen:StriatedMuscle") AnnotationAssertion( "striated muscle") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002036") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "striated muscle tissue") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (cerebellum) AnnotationAssertion(Annotation( ) Annotation( "BTO:0000232") Annotation( "ISBN:3764351209") Annotation( "MESH:A08.186.211.132.810.428.200") Annotation( "ZFA:0000100") "Part of the metencephalon that lies in the posterior cranial fossa behind the brain stem. It is concerned with the coordination of movement[MESH]. A large dorsally projecting part of the brain concerned especially with the coordination of muscles and the maintenance of bodily equilibrium, situated between the brain stem and the back of the cerebrum , and formed in humans of two lateral lobes and a median lobe[BTO]. Brain structure derived from the anterior hindbrain, and perhaps including posterior midbrain. The cerebellum plays a role in somatic motor function, the control of muscle tone, and balance[ZFA].") AnnotationAssertion(Annotation( "ISBN:0471888893"^^xsd:string) ) AnnotationAssertion(Annotation( ) ) AnnotationAssertion(Annotation( "ISBN:0471888893"^^xsd:string) ) AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0010485") Annotation( "AAO"^^xsd:string) Annotation( "AAO:BJB"^^xsd:string) "Dorsal part of the hindbrain that coordinates muscle movement, posture, and balance.[AAO]") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0000100") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "Specialized brain region derived from the dorsal metencephalon (anterior hindbrain, and perhaps including posterior midbrain) and becoming distinctive late in the segmentation period. Kimmel et al, 1995.[TAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000024") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "DOI:10.1016/j.ydbio.2005.02.008 Murakami Y, Uchida K, Rijli FM and Kuratani S, Evolution of the brain developmental plan: Insights from agnathans. Developmental Biology (2005)") "However, although the lamprey possesses a region comparable to the cerebellum and display expression of LjFgf8/17 at the MHB (midbrain hindbrain boundary), it does not have Purkinje cells and cerebellar nuclei, as well as components of the rhombic lip-derived cerebellar and pre-cerebellar systems. It is noteworthy that the latter structures require specific expression of Pax6 in the rhombic lip of the gnathostome hindbrain. Interestingly, the lamprey rhombic lip does not express Pax6. Thus, it is tempting to speculate that in vertebrate evolution the rostral hindbrain is incapable of differentiating into the cerebellum before the co-option of Pax6 in that region. In other words, cerebellum has been brought about as an evolutionary innovation in gnathostomes, based on exaptation of MHB, rhombic lip, and some regulatory gene expression already present in the vertebrate common ancestor.[well established][VHOG]") AnnotationAssertion( "cerebellar") AnnotationAssertion( "The absence of a cerebellum in hagfishes and lampreys appears to be the only exception [to the rule that vertebrates possess the same number of brain divisions]. Both hagfishes and lampreys do possess a thin band of cells located medial to the lateral line centers of the medulla (Ronan and Northcutt, 1998), which has been interpreted as a primitive cerebellum (Larsell, 1967), but more recent experimental studies (Kishida et al., 1987; Weigle and Northcutt, 1998) fail to support Larsell's claim[http://icb.oxfordjournals.org/content/42/4/743.full]") AnnotationAssertion(Annotation( "ABA") "almost all AOs agree that the cerebellum is part of the hindbrain (sometimes specifically part of the metencephalon, which, when present, is part of the hindbrain). However, ABA has cerebellum and brain stem as partof siblings, with the hindbrain part of the brainstem") AnnotationAssertion(Annotation( ) "infratentorial region") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010485") AnnotationAssertion( "BAMS:CB") AnnotationAssertion( "BAMS:Cb") AnnotationAssertion( "BIRNLEX:1489") AnnotationAssertion( "BM:CB") AnnotationAssertion( "BTO:0000232") AnnotationAssertion( "CALOHA:TS-0125") AnnotationAssertion( "DHBA:10656") AnnotationAssertion( "EFO:0000327") AnnotationAssertion( "EHDAA2:0000232") AnnotationAssertion( "EMAPA:17787") AnnotationAssertion( "EV:0100293") AnnotationAssertion( "FMA:67944") AnnotationAssertion( "GAID:595") AnnotationAssertion( "HBA:4696") AnnotationAssertion( "MA:0000198") AnnotationAssertion( "MAT:0000110") AnnotationAssertion( "MBA:512") AnnotationAssertion( "MESH:D002531") AnnotationAssertion( "MIAA:0000110") AnnotationAssertion( "NCIT:C12445") AnnotationAssertion( "OpenCyc:Mx4rvl1eipwpEbGdrcN5Y29ycA") AnnotationAssertion( "TAO:0000100") AnnotationAssertion(Annotation( "BIRNLEX:1489") "UMLS:C0007765") AnnotationAssertion(Annotation( "ncithesaurus:Cerebellum") "UMLS:C0007765") AnnotationAssertion(Annotation( "BIRNLEX:1489") "UMLS:C1268981") AnnotationAssertion( "VHOG:0000024") AnnotationAssertion( "XAO:0003098") AnnotationAssertion( "ZFA:0000100") AnnotationAssertion(Annotation( "BIRNLEX:1489") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=643") AnnotationAssertion(Annotation( "FMA:67944") "epencephalon-1") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:643") Annotation( ) "corpus cerebelli") AnnotationAssertion(Annotation( "NeuroNames:643") Annotation( ) "parencephalon") AnnotationAssertion( "UBERON:0002037") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "cerebellum") AnnotationAssertion( "Cerebellum:NIH.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) Annotation( "MA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "definitional"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (substantia nigra) AnnotationAssertion(Annotation( "BIRNLEX:789") "Predominantly gray matter midbrain structure lying dorsal to the crus cerebri and ventral to the midbrain tegmentum. It is divided into a dorsal, cellularly compact region known as the pars compacta and a more ventrally located, containing more loosely packed cells, the pars reticulata. The most lateral region of the reticulata is identified as the pars lateralis (MM).") AnnotationAssertion( "TODO - In BTO and NIF, part of basal ganglion which is part of telencephalon - but this is inconsistent with being part of midbrain, if these are spatially disjoint, as in ABA") AnnotationAssertion(Annotation( "FMA:67947") "Subdivision of the midbrain anterior to the midbrain tegmentum which contains darkly pigmented neurons[FMA][FMA:67947].") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001573") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0471090588 Hildebrand M, Analysis of vertebrate structure (1983) p.336") "(...) the substantia nigra first appears in reptiles and is best developed in primates.[well established][VHOG]") AnnotationAssertion(Annotation( "BIRNLEX:789") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "SN") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:SN") AnnotationAssertion( "BIRNLEX:789") AnnotationAssertion( "BTO:0000143") AnnotationAssertion( "CALOHA:TS-0990") AnnotationAssertion( "DHBA:12251") AnnotationAssertion( "EFO:0000922") AnnotationAssertion( "EHDAA2:0004711") AnnotationAssertion( "EMAPA:35835") AnnotationAssertion( "EV:0100247") AnnotationAssertion( "FMA:67947") AnnotationAssertion( "GAID:581") AnnotationAssertion( "HBA:9072") AnnotationAssertion( "MA:0000210") AnnotationAssertion( "MAT:0000504") AnnotationAssertion( "MESH:A08.186.211.132.659.687") AnnotationAssertion( "NCIT:C12453") AnnotationAssertion(Annotation( "BIRNLEX:789") "UMLS:C0038590") AnnotationAssertion(Annotation( "ncithesaurus:Substantia_Nigra") "UMLS:C0038590") AnnotationAssertion(Annotation( "BIRNLEX:789") "UMLS:C1269578") AnnotationAssertion( "VHOG:0001573") AnnotationAssertion(Annotation( "BIRNLEX:789") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=536") AnnotationAssertion( "Soemmering's substance") AnnotationAssertion( "nucleus of basis pedunculi") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:536") Annotation( ) "nucleus pigmentosus subthalamo-peduncularis") AnnotationAssertion(Annotation( ) "substancia nigra") AnnotationAssertion(Annotation( "NeuroNames:536") Annotation( ) "substantia nigra (Soemmerringi)") AnnotationAssertion( "UBERON:0002038") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "substantia nigra") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/5/5f/Midbraincrosssection.png"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "NIF"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA-abduced-lr"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (inferior phrenic vein) AnnotationAssertion(Annotation( ) "The Inferior Phrenic Veins drain the diaphragm and follow the course of the inferior phrenic arteries; the right ends in the inferior vena cava; the left is often represented by two branches, one of which ends in the left renal or suprarenal vein, while the other passes in front of the esophageal hiatus in the diaphragm and opens into the inferior vena cava. [WP,unvetted].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37157") AnnotationAssertion( "FMA:68068") AnnotationAssertion( "MA:0002195") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "venae phrenicae inferiores") AnnotationAssertion( "UBERON:0002039") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "inferior phrenic vein") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/4/4d/Gray577.png"^^xsd:anyURI) SubClassOf(Annotation( "MA"^^xsd:string) ) # Class: (bronchial artery) AnnotationAssertion(Annotation( ) Annotation( "UBERON:cjm"^^xsd:string) "A systemic artery that supplies the lung with with oxygenated blood.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:18608") AnnotationAssertion( "FMA:68109") AnnotationAssertion( "GAID:477") AnnotationAssertion( "MA:0001923") AnnotationAssertion( "MESH:D001981") AnnotationAssertion( "NCIT:C32230") AnnotationAssertion( "OpenCyc:Mx4r4sy0UiNbEd2AAAACs6hRXg") AnnotationAssertion(Annotation( "ncithesaurus:Bronchial_Artery") "UMLS:C0006257") AnnotationAssertion( "bronchial arterial tree") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "arteriae bronchiales") AnnotationAssertion(Annotation( ) Annotation( ) "rami bronchiales partis thoracicae aortae") AnnotationAssertion( "UBERON:0002040") AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "Although there is much variation, there are usually two bronchial arteries that run to the left lung, and one to the right lung.") AnnotationAssertion(rdfs:label "bronchial artery") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/a/a7/Gray1032.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (terminal bronchus) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37763") AnnotationAssertion( "FMA:68416") AnnotationAssertion( "MA:0000440") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002041") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "terminal bronchus") SubClassOf( ) # Class: (lymphatic vessel endothelium) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An endothelium that is part of a lymphatic vessel [Automatically generated definition].") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0005258") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "The vascular endothelium that lines the lymph vessels.[TAO]") AnnotationAssertion( ) AnnotationAssertion( "BTO:0004303") AnnotationAssertion( "CALOHA:TS-2156") AnnotationAssertion( "EMAPA:35533") AnnotationAssertion( "FMA:68444") AnnotationAssertion( "MA:0000750") AnnotationAssertion( "MESH:D004729") AnnotationAssertion( "NCIT:C49258") AnnotationAssertion( "TAO:0005258") AnnotationAssertion(Annotation( "ncithesaurus:Lymphatic_Vessel_Endothelium") "UMLS:C1180786") AnnotationAssertion( "ZFA:0005258") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "endothelium of lymph vessel") AnnotationAssertion(Annotation( "FMA:68444") "endothelium of lymphatic vessel") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "lymph vessel endothelium") AnnotationAssertion(Annotation( "BTO:0004303") "lymphatic endothelium") AnnotationAssertion( "lymphatic vessel endothelium") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002042") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "lymphatic vessel endothelium") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (dorsal raphe nucleus) AnnotationAssertion(Annotation( ) Annotation( ) Annotation( "BIRNLEX:982") "A large raphe nucleus extending from the anterior part of the pons through the mesencephalon; its neurons are serotoninergic[NIF]. The dorsal raphe nucleus is a part of the raphe nucleus and consists of rostral and caudal subdivisions. The rostral aspect of the dorsal raphe is further divided into interfascicular, ventral, ventrolateral and dorsal subnuclei. The projections of the dorsal raphe have been found to vary topographically, and thus the subnuclei differ in their projections. An increased number of cells in the lateral aspects of the dorsal raphe is characteristic of humans and other primates. [WP,unvetted].") AnnotationAssertion( "TODO check dorsal vs inferior. ZF has no pons.") AnnotationAssertion(Annotation( "BIRNLEX:982") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "DR") AnnotationAssertion(Annotation( "BIRNLEX:982") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "DRN") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:DR") AnnotationAssertion( "BIRNLEX:982") AnnotationAssertion( "BM:MB-DR") AnnotationAssertion( "BTO:0002434") AnnotationAssertion( "DHBA:12223") AnnotationAssertion( "EFO:0001919") AnnotationAssertion( "EMAPA:35293") AnnotationAssertion( "FMA:68462") AnnotationAssertion( "HBA:9457") AnnotationAssertion( "MA:0002980") AnnotationAssertion( "MBA:872") AnnotationAssertion( "TAO:0000366") AnnotationAssertion(Annotation( "BIRNLEX:982") "UMLS:C0175392") AnnotationAssertion( "ZFA:0000366") AnnotationAssertion(Annotation( "BIRNLEX:982") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=512") AnnotationAssertion(Annotation( "FMA:68462") "cell group b7") AnnotationAssertion(Annotation( "BrainInfo:512") Annotation( "FMA:68462") "dorsal nucleus of the raphe") AnnotationAssertion(Annotation( "FMA:68462") "dorsal nucleus raphe") AnnotationAssertion(Annotation( "BIRNLEX:982") "dorsal raphe") AnnotationAssertion(Annotation( "GO:0021724") "inferior raphe nucleus") AnnotationAssertion(Annotation( "BTO:0002434") Annotation( "BrainInfo:512") "nucleus raphes dorsalis") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) Annotation( ) "nucleus raphes posterior") AnnotationAssertion(Annotation( "FMA:68462") "posterior raphe nucleus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BAMS:DR") "dorsal raphé") AnnotationAssertion(Annotation( "NeuroNames:512") Annotation( ) "nucleus dorsalis raphes") AnnotationAssertion(Annotation( ) Annotation( ) "nucleus raphe dorsalis") AnnotationAssertion(Annotation( ) Annotation( ) "nucleus raphe posterior") AnnotationAssertion(Annotation( "BTO:0002434") "nucleus raphes posterior") AnnotationAssertion(Annotation( "GO:0021724") "posterior raphe nucleus") AnnotationAssertion( "UBERON:0002043") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "dorsal raphe nucleus") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/c/c6/Drn.png"^^xsd:anyURI) AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/en/thumb/c/c6/Drn.png/200px-Drn.png"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "Wikipedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (ventral nucleus of posterior commissure) AnnotationAssertion(Annotation( "BIRNLEX:896") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "Dk") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:Dk") AnnotationAssertion( "BAMS:ND") AnnotationAssertion( "BIRNLEX:896") AnnotationAssertion( "BM:MB-D") AnnotationAssertion( "DHBA:12218") AnnotationAssertion( "DMBA:16629") AnnotationAssertion( "EMAPA:35597") AnnotationAssertion( "FMA:68464") AnnotationAssertion( "HBA:9047") AnnotationAssertion( "MA:0001072") AnnotationAssertion( "MBA:587") AnnotationAssertion(Annotation( "BIRNLEX:896") "UMLS:C0262291") AnnotationAssertion(Annotation( "BIRNLEX:896") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=514") AnnotationAssertion( "Darkshevich nucleus") AnnotationAssertion(Annotation( "FMA:68464") "Darkshevich's nucleus") AnnotationAssertion(Annotation( "FMA:68464") "nucleus of Darkschewitsch") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:514") Annotation( ) "nucleus Darkschewitsch") AnnotationAssertion(Annotation( "NeuroNames:514") Annotation( ) "nucleus Darkschewitschi") AnnotationAssertion(Annotation( "NeuroNames:514") Annotation( ) "nucleus accessorius") AnnotationAssertion(Annotation( "NeuroNames:514") Annotation( ) "nucleus commissurae posterioris (Riley)") AnnotationAssertion(Annotation( "NeuroNames:514") Annotation( ) "nucleus fasciculi longitudinalis medialis") AnnotationAssertion(Annotation( "NeuroNames:514") "nucleus of Darkschewitsch (Cajal)") AnnotationAssertion(Annotation( "NeuroNames:514") "nucleus of Darkshevich") AnnotationAssertion(Annotation( "NeuroNames:514") "nucleus of the posterior commissure (Darkschewitsch)") AnnotationAssertion( "UBERON:0002044") AnnotationAssertion(rdfs:label "ventral nucleus of posterior commissure") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (cuneate nucleus) AnnotationAssertion(Annotation( ) "One of the dorsal column nuclei, the cuneate nucleus is a wedge-shaped nucleus in the closed part of the medulla oblongata. It contains cells that give rise to the cuneate tubercle, visible on the posterior aspect of the medulla. It lies laterally to the gracile nucleus and medial to the spinal trigeminal nucleus in the medulla. [WP,unvetted].") AnnotationAssertion(Annotation( "BIRNLEX:2640") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "Cu") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:CU") AnnotationAssertion( "BAMS:Cu") AnnotationAssertion( "BIRNLEX:2640") AnnotationAssertion( "BM:Me-Cu") AnnotationAssertion( "DHBA:12589") AnnotationAssertion( "EMAPA:35268") AnnotationAssertion( "FMA:68465") AnnotationAssertion( "HBA:9542") AnnotationAssertion( "MA:0001035") AnnotationAssertion( "MBA:711") AnnotationAssertion( "NCIT:C52716") AnnotationAssertion(Annotation( "ncithesaurus:Cuneate_Nucleus") "UMLS:C0228548") AnnotationAssertion(Annotation( "BIRNLEX:2640") "UMLS:C0587939") AnnotationAssertion(Annotation( "BIRNLEX:2640") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=767") AnnotationAssertion( "Burdach's nucleus") AnnotationAssertion(Annotation( "BIRNLEX:2640") "burdachs nucleus") AnnotationAssertion(Annotation( "BIRNLEX:2640") "cuneate") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:767") "cuneate nucleus (Burdach)") AnnotationAssertion(Annotation( "NeuroNames:767") "cuneate nucleus of the medulla") AnnotationAssertion(Annotation( ) Annotation( ) "nucleus cuneatus") AnnotationAssertion(Annotation( "NeuroNames:767") Annotation( ) "nucleus cuneatus medialis") AnnotationAssertion(Annotation( "NeuroNames:767") Annotation( ) "nucleus restiformis") AnnotationAssertion( "UBERON:0002045") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "cuneate nucleus") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/5/52/Gray691.png"^^xsd:anyURI) SubClassOf(Annotation( "ABA"^^xsd:string) Annotation( "ISBN:978-1-4615-0037-7") Annotation( "WP"^^xsd:string) ) # Class: (thyroid gland) AnnotationAssertion(Annotation( ) Annotation( "BTO:0001379") "A two-lobed endocrine gland found in all vertebrates, located in front of and on either side of the trachea in humans, and producing various hormones, such as triiodothyronine and calcitonin[BTO].") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0010544") Annotation( "AAO"^^xsd:string) Annotation( "AAO:BJB"^^xsd:string) "Either of paired structures located in the throat which develop from the ventral wall of the pharynx and excretes hormones involved in the morphological and functional changes during metamorphosis as well as influencing other tissues.[AAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000418") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0030223693 Liem KF, Bemis WE, Walker WF, Grande L, Functional Anatomy of the Vertebrates: An Evolutionary Perspective (2001) p.28"^^xsd:string) "(...) at some stage of its development, every chordate exhibits five uniquely derived characters or synapomorphies of the group: (...) (2) a groove in the pharyngeal floor known as the endostyle, or a thyroid gland derived from part of the endostyle (...).[well established][VHOG]") AnnotationAssertion(Annotation( "NCBITaxon:32443") Annotation( ) Annotation( "Romer") "In fish, it is usually located below the gills and is not always divided into distinct lobes. However, in some teleosts, patches of thyroid tissue are found elsewhere in the body, associated with the kidneys, spleen, heart, or eyes") AnnotationAssertion(Annotation( "NCBITaxon:7746") Annotation( ) Annotation( "Romer") "In larval lampreys, the thyroid originates as an exocrine gland, secreting its hormones into the gut, and associated with the larva's filter-feeding apparatus. In the adult lamprey, the gland separates from the gut, and becomes endocrine, but this path of development may reflect the evolutionary origin of the thyroid. For instance, the closest living relatives of vertebrates, the tunicates and Amphioxus, have a structure very similar to that of larval lampreys, and this also secretes iodine-containing compounds (albeit not thyroxine)") AnnotationAssertion(Annotation( "NCBITaxon:32523") Annotation( ) Annotation( "Romer") "In tetrapods, the thyroid is always found somewhere in the neck region. In most tetrapod species, there are two paired thyroid glands - that is, the right and left lobes are not joined together. However, there is only ever a single thyroid gland in most mammals, and the shape found in humans is common to many other species") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010544") AnnotationAssertion( "BTO:0001379") AnnotationAssertion( "CALOHA:TS-1047") AnnotationAssertion( "EFO:0000861") AnnotationAssertion( "EHDAA2:0002028") AnnotationAssertion( "EHDAA:2148") AnnotationAssertion( "EHDAA:2975") AnnotationAssertion( "EMAPA:17068") AnnotationAssertion( "EV:0100133") AnnotationAssertion( "FMA:9603") AnnotationAssertion( "GAID:465") AnnotationAssertion( "MA:0000129") AnnotationAssertion( "MAT:0000081") AnnotationAssertion( "MESH:D013961") AnnotationAssertion( "MIAA:0000081") AnnotationAssertion( "NCIT:C12400") AnnotationAssertion( "OpenCyc:Mx4rvVjLT5wpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Thyroid_Gland") "UMLS:C0040132") AnnotationAssertion( "VHOG:0000418") AnnotationAssertion( "XAO:0000162") AnnotationAssertion( "galen:ThyroidGland") AnnotationAssertion( "thyroid") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "glandula thyroidea") AnnotationAssertion( "UBERON:0002046") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "thyroid gland") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/a/a3/Illu_thyroid_parathyroid.jpg"^^xsd:anyURI) AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/c/c6/Illu_endocrine_system.jpg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pontine raphe nucleus) AnnotationAssertion(Annotation( ) "The pontine raphe nucleus is one of the raphe nuclei. It is located in the pontine tegmentum. [WP,unvetted].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:PnR") AnnotationAssertion( "BAMS:RA-PONS") AnnotationAssertion( "BAMS:RPn") AnnotationAssertion( "BIRNLEX:1110") AnnotationAssertion( "DHBA:12471") AnnotationAssertion( "DHBA:12475") AnnotationAssertion( "FMA:68875") AnnotationAssertion( "HBA:9159") AnnotationAssertion( "MA:0001022") AnnotationAssertion( "MBA:238") AnnotationAssertion(Annotation( "BIRNLEX:1110") "UMLS:C0175423") AnnotationAssertion(Annotation( "BIRNLEX:1110") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=589") AnnotationAssertion( "raphe of pons") AnnotationAssertion(Annotation( "FMA:68875") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "raphe pontis") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:589") Annotation( ) "nucleus raphe pontis") AnnotationAssertion(Annotation( ) Annotation( ) "nucleus raphes pontis") AnnotationAssertion(Annotation( "NeuroNames:589") Annotation( ) "raphe (mediana pontina)") AnnotationAssertion( "raphe pontis nucleus") AnnotationAssertion( "UBERON:0002047") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "pontine raphe nucleus") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "Wikipedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (lung) AnnotationAssertion(Annotation( ) "Respiration organ that develops as an outpocketing of the esophagus.") AnnotationAssertion(Annotation( "BGEE:fb") Annotation( ) ) AnnotationAssertion(Annotation( "BGEE:fb") Annotation( ) ) AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0010567") Annotation( "AAO"^^xsd:string) Annotation( "AAO:SBH") "Either of two organs which allow gas exchange absorbing oxygen from inhaled air and releasing carbon dioxide with exhaled air.[AAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000310") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0198566694 Schmidt-Rhaesa A, The evolution of organ systems (2007) p.210, DOI:10.1371/journal.pone.0024019 Zheng W, Wang Z, Collins JE, Andrews RM, Stemple D, Gong Z, Comparative transcriptome analyses indicate molecular homology of zebrafish swimbladder and Mammalian lung. PLoS One (2011)") "Lungs had already developed as paired ventral pockets from the intestine in the ancestor of Osteognathostomata. (...) In actinopterygian fishes, apart from Cladistia, the ventral intestinal pocket migrates dorsally and becomes the swim-bladder, a mainly hydrostatical organ (reference 1); Comparative transcriptome analyses indicate molecular homology of zebrafish swimbladder and Mammalian lung (reference 2).[well established][VHOG]") AnnotationAssertion( "pulmonary") AnnotationAssertion( "respiration organ in all air-breathing animals, including most tetrapods, a few fish and a few snails. In mammals and the more complex life forms, the two lungs are located in the chest on either side of the heart. Their principal function is to transport oxygen from the atmosphere into the bloodstream, and to release carbon dioxide from the bloodstream into the atmosphere. This exchange of gases is accomplished in the mosaic of specialized cells that form millions of tiny, exceptionally thin-walled air sacs called alveoli. // Avian lungs do not have alveoli as mammalian lungs do, they have Faveolar lungs. They contain millions of tiny passages known as para-bronchi, connected at both ends by the dorsobronchi") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0000275") AnnotationAssertion( "AAO:0010567") AnnotationAssertion( "BTO:0000763") AnnotationAssertion( "CALOHA:TS-0568") AnnotationAssertion( "EFO:0000934") AnnotationAssertion( "EHDAA2:0001042") AnnotationAssertion( "EHDAA:1554") AnnotationAssertion( "EHDAA:2205") AnnotationAssertion( "EMAPA:16728") AnnotationAssertion( "EV:0100042") AnnotationAssertion( "FMA:7195") AnnotationAssertion( "GAID:345") AnnotationAssertion( "MA:0000415") AnnotationAssertion( "MAT:0000135") AnnotationAssertion( "MESH:D008168") AnnotationAssertion( "MIAA:0000135") AnnotationAssertion( "NCIT:C12468") AnnotationAssertion( "OpenCyc:Mx4rvVjKy5wpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Lung") "UMLS:C0024109") AnnotationAssertion( "VHOG:0000310") AnnotationAssertion( "XAO:0000119") AnnotationAssertion( "galen:Lung") AnnotationAssertion(Annotation( ) "pulmo") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002048") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "Snakes and limbless lizards typically possess only the right lung as a major respiratory organ; the left lung is greatly reduced, or even absent. Amphisbaenians, however, have the opposite arrangement, with a major left lung, and a reduced or absent right lung [WP]") AnnotationAssertion(rdfs:label "lung") AnnotationAssertion(rdfs:seeAlso "https://github.com/obophenotype/uberon/issues/701"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "some species only have a single lung") ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (vasculature) AnnotationAssertion(Annotation( "ZFA:0005249") "An interconnected tubular multi-tissue structure contains fluid that is actively transported around the organism[ZFA]. Examples: vasculature of lung, vasculature of face.") AnnotationAssertion( "see also: vascular system. Consider merging?") AnnotationAssertion( "vascular") AnnotationAssertion( "BTO:0003718") AnnotationAssertion( "FMA:69050") AnnotationAssertion( "TAO:0005249") AnnotationAssertion( "ZFA:0005249") AnnotationAssertion(Annotation( "FMA:69050") "vascular network") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002049") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "vasculature") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/2/29/Circulatory_System_en.svg"^^xsd:anyURI) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (embryonic structure) AnnotationAssertion(Annotation( "BTO:0000174") Annotation( "ZFIN:curator"^^xsd:string) "Anatomical structure that is part of an embryo.") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0000138") Annotation( "AAO"^^xsd:string) Annotation( "AAO:BJB"^^xsd:string) "Anatomical structure that is part of the embryo and is comprised of portions of tissue or cells.[AAO]") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0001105") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "Anatomical structure that is part of the embryo and is comprised of portions of tissue or cells.[TAO]") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "VSAO:0000178") Annotation( "VSAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "Anatomical structure that is part of the embryo and is comprised of portions of tissue or cells.[VSAO]") AnnotationAssertion(Annotation( "FMA"^^xsd:string) "in FMA embryo is_a embryonic structure") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0000138") AnnotationAssertion( "BILA:0000034") AnnotationAssertion( "BTO:0000174") AnnotationAssertion( "CALOHA:TS-2110") AnnotationAssertion( "EFO:0000461") AnnotationAssertion( "FBbt:00004208") AnnotationAssertion( "FMA:69067") AnnotationAssertion( "GAID:407") AnnotationAssertion( "MESH:D004628") AnnotationAssertion( "NCIT:C13229") AnnotationAssertion( "RETIRED_EHDAA2:0003169") AnnotationAssertion( "TAO:0001105") AnnotationAssertion(Annotation( "ncithesaurus:Embryonic_Structure") "UMLS:C0013948") AnnotationAssertion( "VSAO:0000178") AnnotationAssertion( "XAO:0003042") AnnotationAssertion( "ZFA:0001105") AnnotationAssertion(Annotation( "FBbt:00004208") "developing embryonic structure") AnnotationAssertion(Annotation( "RETIRED_EHDAA2:0003169") "embryonic anatomical structure") AnnotationAssertion( "uberon") AnnotationAssertion( "developing structure") AnnotationAssertion(Annotation( "BTO:0000174") "embryonale Struktur") AnnotationAssertion(Annotation( "ZFA:0001105") Annotation( ) "embryonic structures") AnnotationAssertion( "UBERON:0002050") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "embryonic structure") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (epithelium of bronchiole) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An epithelium that is part of a bronchiole [Automatically generated definition].") AnnotationAssertion(Annotation( "FMA"^^xsd:string) "in FMA2 and FMA3, lobular bronchiole is an exact synonym of bronchiole; however there are two distinct terms for the corresponding epithelium.") AnnotationAssertion( ) AnnotationAssertion( "BTO:0001866") AnnotationAssertion( "CALOHA:TS-0570") AnnotationAssertion( "EMAPA:32693") AnnotationAssertion( "FMA:62497") AnnotationAssertion( "FMA:69077") AnnotationAssertion( "MA:0001772") AnnotationAssertion( "NCIT:C48942") AnnotationAssertion(Annotation( "ncithesaurus:Bronchiole_Epithelium") "UMLS:C1181296") AnnotationAssertion(Annotation( "BTO:0001866") "bronchiolar epithelium") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bronchiole epithelial tissue") AnnotationAssertion( "bronchiole epithelium") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelial tissue of bronchiole") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelial tissue of lobular bronchiole") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelium of lobular bronchiole") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "lobular bronchiole epithelial tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "lobular bronchiole epithelium") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002051") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "epithelium of bronchiole") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (adrenal gland capsule) AnnotationAssertion(Annotation( "MP:0013565") "The thick capsule of dense irregular connective tissue that surrounds each adrenal gland and contains scattered elastic fibers; the capsule contains a rich plexus of blood vessels (mainly small arteries) and numerous nerve fibers; some blood vessels and nerves enter the substance of the gland in the trabeculae that extend inward from the capsule and then leave the trabeculae to enter the cortex.") AnnotationAssertion( ) AnnotationAssertion( "FMA:69087") AnnotationAssertion( "MA:0000117") AnnotationAssertion( "NCIT:C32050") AnnotationAssertion(Annotation( "ncithesaurus:Adrenal_Gland_Capsule") "UMLS:C1181304") AnnotationAssertion(Annotation( "FMA:69087") "capsule of adrenal gland") AnnotationAssertion( "uberon") AnnotationAssertion( "adrenal capsule") AnnotationAssertion( "UBERON:0002052") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "adrenal gland capsule") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (zona glomerulosa of adrenal gland) AnnotationAssertion(Annotation( "MESH:A06.407.071.140.960") Annotation( "MGI:llw2") Annotation( "MP:0008293") "The narrow subcapsular outer zone of the adrenal cortex where aldosterone is produced.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0000048") AnnotationAssertion( "CALOHA:TS-0017") AnnotationAssertion( "EMAPA:35115") AnnotationAssertion( "FMA:69225") AnnotationAssertion( "GAID:449") AnnotationAssertion( "MA:0001891") AnnotationAssertion( "MESH:D015384") AnnotationAssertion(Annotation( "MA:0001891") "adrenal gland zona glomerulosa") AnnotationAssertion( "zona glomerulosa") AnnotationAssertion( "zona glomerulosa of suprarenal gland") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0000048") "glomerulosa") AnnotationAssertion( "UBERON:0002053") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "zona glomerulosa of adrenal gland") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/5/5c/Gray1185.png"^^xsd:anyURI) SubClassOf(Annotation( "MA"^^xsd:string) ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (zona fasciculata of adrenal gland) AnnotationAssertion(Annotation( "MESH:A06.407.071.140.950") Annotation( "MP:0008294") "The wide middle zone of the adrenal cortex that produces cortisol (hydrocortisone).") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0000050") AnnotationAssertion( "EMAPA:35114") AnnotationAssertion( "FMA:69234") AnnotationAssertion( "GAID:448") AnnotationAssertion( "MA:0001890") AnnotationAssertion( "MESH:D015383") AnnotationAssertion(Annotation( "MA:0001890") "adrenal gland zona fasciculata") AnnotationAssertion(Annotation( "BTO:0000050") "zona fasciculata") AnnotationAssertion( "zona fasciculata of suprarenal gland") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002054") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "zona fasciculata of adrenal gland") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/5/5c/Gray1185.png"^^xsd:anyURI) SubClassOf(Annotation( "MA"^^xsd:string) ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (zona reticularis of adrenal gland) AnnotationAssertion(Annotation( "MESH:A06.407.071.140.970") Annotation( "MP:0008295") "The inner zone of the adrenal cortex that produces the enzymes that convert pregnenolone, a 21-carbon steroid, to 19-carbon steroids.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0000056") AnnotationAssertion( "EMAPA:35116") AnnotationAssertion( "FMA:69236") AnnotationAssertion( "GAID:450") AnnotationAssertion( "MA:0001892") AnnotationAssertion( "MESH:D015385") AnnotationAssertion(Annotation( "MA:0001892") "adrenal gland zona reticularis") AnnotationAssertion( "zona reticularis") AnnotationAssertion( "zona reticularis of suprarenal gland") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002055") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "zona reticularis of adrenal gland") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/5/5c/Gray1185.png"^^xsd:anyURI) SubClassOf(Annotation( "MA"^^xsd:string) ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (inferior suprarenal artery) AnnotationAssertion(Annotation( ) "Each renal artery gives off some small inferior suprarenal branches to the suprarenal gland, the ureter, and the surrounding cellular tissue and muscles. [WP,unvetted].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37088") AnnotationAssertion( "FMA:69264") AnnotationAssertion( "MA:0002056") AnnotationAssertion( "NCIT:C52737") AnnotationAssertion(Annotation( "ncithesaurus:Inferior_Suprarenal_Artery") "UMLS:C0226334") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "arteria suprarenalis inferior") AnnotationAssertion( "UBERON:0002056") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "inferior suprarenal artery") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/6/61/Gray1121.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (phrenic artery) AnnotationAssertion(Annotation( ) "An artery that supplies the diaphragm.") AnnotationAssertion( "In humans this includes the superior and inferior phrenic arteries") AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37108") AnnotationAssertion( "FMA:69330") AnnotationAssertion( "MA:0002019") AnnotationAssertion( "NCIT:C33320") AnnotationAssertion(Annotation( "ncithesaurus:Phrenic_Artery") "UMLS:C1181536") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002057") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "phrenic artery") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (main ciliary ganglion) AnnotationAssertion(Annotation( ) Annotation( "UBERON:cjm"^^xsd:string) "A parasympathetic ganglion located in the posterior orbit that contains preganglionic nerves and postganglionic neurons of the oculomotor nerve, connects to the Edinger-Westphal nucleus via the oculomotor nerve and the eye muscles via the short ciliary nerve.") AnnotationAssertion( "the main ciliary ganglion (typically just called the ciliary ganglion) is differentiated from the accessory by connection to the oculomotor nerve.") AnnotationAssertion(Annotation( ) "The ciliary ganglion is a parasympathetic ganglion located in the posterior orbit. It measures 1-2 millimeters in diameter and contains approximately 2,500 neurons. Preganglionic axons from the Edinger-Westphal nucleus form synapses with these cells. The postganglionic axons run in the short ciliary nerves and innervate two eye muscles: the sphincter pupillae constricts the pupil, known as Miosis. The opposite, Mydriasis, is the dilation of the pupil. the ciliaris muscle contracts, releasing tension on the Zonular Fibers, making the lens more convex, also known as accommodation. Both of these muscles are involuntary - they are controlled by the autonomic nervous system. It is one of four parasympathetic ganglia of the head and neck.. [WP,unvetted][Wikipedia:Ciliary_ganglion].") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000805") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "DOI:10.1016/j.autneu.2010.03.002 Young HM, Cane KN, Anderson CR, Development of the autonomic nervous system: A comparative view. Autonomic Neuroscience : basic and clinical (2010)") "Little is known about the development of parasympathetic neurons apart from the ciliary ganglion in chicks. Although there are considerable gaps in our knowledge, some of the mechanisms controlling sympathetic and enteric neuron development appear to be conserved between mammals, avians and zebrafish.[uncertain][VHOG]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:GcIII") AnnotationAssertion( "EFO:0002559") AnnotationAssertion( "EHDAA2:0000251") AnnotationAssertion( "EHDAA:5623") AnnotationAssertion( "EMAPA:18222") AnnotationAssertion( "FMA:6964") AnnotationAssertion( "MA:0001136") AnnotationAssertion( "NLXANAT:100304") AnnotationAssertion( "VHOG:0000805") AnnotationAssertion(Annotation( "MA:0001136") "ciliary ganglion") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "ganglion ciliare") AnnotationAssertion( "UBERON:0002058") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "main ciliary ganglion") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/3/30/Augennerven.jpg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (submandibular ganglion) AnnotationAssertion(Annotation( "ISBN:0-683-40008-8"^^xsd:string) Annotation( "MP:0001035") "The ganglion associated with the lingual nerve that provides postsynaptic fibers to the submandibular and sublingual glands.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0001318") AnnotationAssertion( "EHDAA2:0001942") AnnotationAssertion( "EHDAA:6710") AnnotationAssertion( "EMAPA:36276") AnnotationAssertion( "FMA:6966") AnnotationAssertion( "MA:0002470") AnnotationAssertion( "NCIT:C52558") AnnotationAssertion(Annotation( "ncithesaurus:Submandibular_Ganglion") "UMLS:C0229063") AnnotationAssertion(Annotation( "UBERON:cjm"^^xsd:string) Annotation( ) "mandibular ganglion") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0001318") "Blandin`s ganglion") AnnotationAssertion(Annotation( ) Annotation( ) "ganglion submandibulare") AnnotationAssertion(Annotation( "BTO:0001318") "ganglion submandibulare") AnnotationAssertion(Annotation( ) Annotation( "MA:0002470") "lingual ganglion") AnnotationAssertion(Annotation( "MA:0002470") "maxillary ganglion") AnnotationAssertion(Annotation( "MA:0002470") "submaxillary ganglion") AnnotationAssertion( "UBERON:0002059") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "submandibular ganglion") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/8/83/Gray778.png"^^xsd:anyURI) AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/en/thumb/8/83/Gray778.png/200px-Gray778.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (femoral artery) AnnotationAssertion(Annotation( ) "The femoral artery is a large artery in the muscles of the thigh. It is a continuation of external iliac artery where it enters the femoral triangle at the mid inguinal point behind the inguinal ligament. It leaves femoral triangle through apex beneath the sartorius muscle. It enters the popliteal fossa by passing through the 5th osseo-aponeurotic(adductor hiatus) opening of adductor magnus where it becomes the Popliteal Artery. [WP,unvetted].") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0010222") Annotation( "AAO"^^xsd:string) Annotation( "AAO:BJB"^^xsd:string) "Artery which supplies blood via branches to the hindlimbs.[AAO]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010222") AnnotationAssertion( "BTO:0001624") AnnotationAssertion( "CALOHA:TS-0321") AnnotationAssertion( "EMAPA:35342") AnnotationAssertion( "FMA:70248") AnnotationAssertion( "GAID:494") AnnotationAssertion( "MA:0001951") AnnotationAssertion( "MESH:D005263") AnnotationAssertion( "NCIT:C12715") AnnotationAssertion( "OpenCyc:Mx4rwHMI05wpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Femoral_Artery") "UMLS:C0015801") AnnotationAssertion( "galen:FemoralArtery") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "arteria femoralis") AnnotationAssertion( "UBERON:0002060") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "femoral artery") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/7/7d/Gray546.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA"^^xsd:string) Annotation( "WP"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (truncus arteriosus) AnnotationAssertion(Annotation( ) "The truncus arteriosus and bulbus cordis are divided by the aorticopulmonary septum. The truncus arteriosus gives rise to the ascending aorta and the pulmonary trunk. The bulbus cordis gives rise to the smooth parts (outflow tract) of the left and right ventricles.") AnnotationAssertion(Annotation( "ncit"^^xsd:string) "assume spelling error for ncit") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0004143") AnnotationAssertion( "EMAPA:35887") AnnotationAssertion( "FMA:70301") AnnotationAssertion( "GAID:554") AnnotationAssertion( "MA:0000103") AnnotationAssertion( "MESH:D014338") AnnotationAssertion( "NCIT:C34317") AnnotationAssertion( "OpenCyc:Mx4rquH9YKgNEdudWQACs5b6Bw") AnnotationAssertion(Annotation( "ncithesaurus:Trancus_Arteriosus") "UMLS:C1519589") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002061") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "truncus arteriosus") SubClassOf(Annotation( "EHDAA2"^^xsd:string) ) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "MA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (endocardial cushion) AnnotationAssertion(Annotation( ) Annotation( "GO:0003197") Annotation( "ZFIN:curator"^^xsd:string) "The endocardial cushion is a specialized region of mesenchymal cells that will give rise to the heart septa and valves[GO]. Swellings of tissue present between the endocardial and myocardial cell layers that will give rise to the interstitial cells of the cardiac valves[ZFA].") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0001317") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "Swellings of tissue present between the endocardial and myocardial cell layers that will give rise to the interstitial cells of the cardiac valves.[TAO]") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0001317") Annotation( "TAO"^^xsd:string) "relationship loss: develops_from endocardial ring (TAO:0005072)[TAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000932") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "DOI:10.1038/35047564 Stainier DYR, Zebrafish genetics and vertebrate heart formation. Nature Reviews Genetics (2001) Figure 3") "(Cardiac valve formation in vertebrates) In response to a myocardial signal, endocardial cells at chamber boundaries take on a mesenchymal character, delaminate and migrate into the cardiac jelly. There, they form an endocardial cushion that is later remodelled into a valve.[well established][VHOG]") AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0000434") AnnotationAssertion( "EHDAA2:0004028") AnnotationAssertion( "EHDAA:2586") AnnotationAssertion( "EMAPA:16696") AnnotationAssertion( "FMA:70302") AnnotationAssertion( "MA:0000078") AnnotationAssertion( "TAO:0001317") AnnotationAssertion( "VHOG:0000932") AnnotationAssertion( "XAO:0004189") AnnotationAssertion( "ZFA:0001317") AnnotationAssertion( "AV cushion") AnnotationAssertion(Annotation( ) "atrioventricular cushion") AnnotationAssertion(Annotation( ) "cardiac cushion") AnnotationAssertion(Annotation( "EHDAA2:0000434") "endocardial cushion tissue") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:70302") "atrioventricular canal cushion") AnnotationAssertion(Annotation( ) "endocardial cushions") AnnotationAssertion( "UBERON:0002062") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "GO graph seems to suggest this is an endothelium. WP: The endocardial cushions are thought to arise from a subset of endothelial cells that undergo epithelial to mesenchymal transformation, a process whereby these cells break cell-to-cell contacts and migrate into the cardiac jelly (towards to interior of the heart tube). Latest (2010-06-01) new def suggested for GO, added above. Note that EHDAA2 has a more detailed model which we may later adopt. JB: Patterning makes the cushions lay down connective tissue in three domains that force out the local endothelial lining and so the leaflets form") AnnotationAssertion(rdfs:label "endocardial cushion") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/c/c7/Gray465.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "ZFA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (sinus venosus) AnnotationAssertion(Annotation( ) Annotation( ) "The sinus venosus is a large cardiac chamber at the inflow tract that receives venous blood from systemic circulation. precedes the atrium on the venous side of the chordate heart.") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0000154") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "Heart region collecting blood from the paired common cardinal veins and delivering to the atrium. One of four components of the heart. The sinus venosus also acts as a pacemaker and is the first to contract. Kimmel et al, 1995.[TAO]") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0010505") Annotation( "AAO"^^xsd:string) Annotation( "AAO:BJB"^^xsd:string) "Part of the circulatory system which receives blood from the systemic veins and contracts to pump the blood into the atrium of the heart.[AAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000177") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0721676678 Romer AS, Vertebrate body (1970) p.428") "In the primitive vertebrate heart the four chambers are: 1. Sinus venosus (...) 2. Atrium (...) 3. Ventricle (...) 4. Conus arteriosus (...).[well established][VHOG]") AnnotationAssertion( "In fish, receives venous blood from the systemic circulation through paired hepatic veins, anterior jugular veins and Cuvierian ducts[PMID:20735616]") AnnotationAssertion( "In humans, it exists distinctly only in the embryonic heart, where it is found between the two venae cavae. In the adult, it is incorporated into the wall of the right atrium to form a smooth part called the sinus venarum, also known as the venarum sinus, which is separated from the rest of the atrium by a ridge of fibres called the crista terminalis. The sinus venosus also forms the SA node and the coronary sinus. In the embryo, the thin walls of the sinus venosus are connected below with the right ventricle, and medially with the left atrium, but are free in the rest of their extent. It receives blood from the vitelline vein, umbilical vein and common cardinal vein. It originally starts as a paired structure but shifts towards associating only with the right atrium as the embryonic heart develops. The left portion shrinks in size and eventually forms the coronary sinus and oblique vein of the left atrium, whereas the right part becomes incorporated into the right atrium to form the sinus venarmu") AnnotationAssertion(Annotation( "ZFA:0000154") "In zebrafish, the sinus venosus also acts as a pacemaker and is the first to contract") AnnotationAssertion(Annotation( "ZFA:0000154") "inflow tract") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010505") AnnotationAssertion( "EHDAA2:0001839") AnnotationAssertion( "EHDAA:480") AnnotationAssertion( "EMAPA:16237") AnnotationAssertion( "FMA:70303") AnnotationAssertion( "NCIT:C34299") AnnotationAssertion( "NCIT:C34300") AnnotationAssertion( "TAO:0000154") AnnotationAssertion(Annotation( "ncithesaurus:Sinus_Venarum") "UMLS:C0225857") AnnotationAssertion(Annotation( "ncithesaurus:Sinus_Venosus") "UMLS:C0231084") AnnotationAssertion( "VHOG:0000177") AnnotationAssertion( "ZFA:0000154") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "sinus venarum") AnnotationAssertion(Annotation( ) Annotation( ) "sinus venosus cordis") AnnotationAssertion(Annotation( ) "venarum") AnnotationAssertion(Annotation( ) "venarum sinus") AnnotationAssertion(Annotation( ) "venosus") AnnotationAssertion( "UBERON:0002063") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "sinus venosus") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/c/c7/Gray465.png"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "VHOG"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "Bgee:AN"^^xsd:string) ObjectSomeValuesFrom( )) DisjointClasses( ) # Class: (common cardinal vein) AnnotationAssertion(Annotation( ) Annotation( "BTO:0004388") "Either of a pair of large transverse venous sinuses that conduct blood from the cardinal veins to the sinus venosus of the vertebrate embryo[BTO].") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0000186") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "Bilaterally paired longitudinal vein; the anterior cardinal returns blood from the head, and the posterior cardinal returns it from the trunk; these two vessels join together on each side as the common cardinal vein (duct of Cuvier; misnamed the vitelline vein) that leads across the yolk cell to the heart's sinus venosus. Kimmel et al, 1995.[TAO]") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0011033") Annotation( "AAO"^^xsd:string) Annotation( "ZFA:0000186") "Bilaterally paired longitudinal vein; the anterior cardinal returns blood from the head, and the posterior cardinal returns it from the trunk; these two vessels join together on each side as the common cardinal vein, also known as the duct of Cuvier that leads to the heart's sinus venosus.[AAO]") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0000186") Annotation( "TAO"^^xsd:string) "relationship loss: part_of cardinal system (TAO:0000096)[TAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000112") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0072528305 Kardong KV, Vertebrates: Comparative Anatomy, Function, Evolution (2006) p.462") "In primitive vertebrates, the basic early embryonic pattern is retained, and blood from anterior and posterior systemic tissues is returned in anterior and posterior cardinal veins, both pairs of veins uniting in common cardinal veins near the heart. In derived vertebrates, the cardinals appear but usually persist only in the embryo, being functionally replaced by alternative adult vessels, the precava and postcava (anterior and posterior venae cavae).[well established][VHOG]") AnnotationAssertion( "Paired in gnathostomes; with only a vestige of the right duct in the adult hagfish (21) and the left duct atrophying at metamorphosis in the lamprey (22)[PMID:20959416, S1]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0011033") AnnotationAssertion( "BTO:0004388") AnnotationAssertion( "EHDAA:1314") AnnotationAssertion( "EMAPA:16356") AnnotationAssertion( "FMA:70308") AnnotationAssertion( "NCIT:C34130") AnnotationAssertion( "TAO:0000186") AnnotationAssertion(Annotation( "ncithesaurus:Common_Cardinal_Vein") "UMLS:C0231083") AnnotationAssertion( "VHOG:0000112") AnnotationAssertion( "XAO:0000373") AnnotationAssertion( "ZFA:0000186") AnnotationAssertion( "uberon") AnnotationAssertion( "Cuvierian duct") AnnotationAssertion( "duct of Cuvier") AnnotationAssertion(Annotation( "EMAPA:16356") "future coronary sinus") AnnotationAssertion( "UBERON:0002064") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "common cardinal vein") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/8/8c/Gray477.svg"^^xsd:anyURI) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (posterior cardinal vein) AnnotationAssertion(Annotation( ) Annotation( "ISBN:0073040584"^^xsd:string) "One of two paired cardinal veins that return blood from the body of the embryo[Kardong].") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0000477") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "Continuation of the caudal vein cranial to the anal pore. The cardinal vein splits into a pair of vessels in the cranial trunk, just caudal to the radix of the aorta. The posterior cardinals each empty into the common cardinal vein. [TAO]") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0010511") Annotation( "AAO"^^xsd:string) Annotation( "AAO:BJB"^^xsd:string) "Either of two veins which receive blood as an alternate route from the kidneys.[AAO]") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0000477") Annotation( "TAO"^^xsd:string) "relationship loss: part_of axial vasculature (TAO:0001073)[TAO]") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0000477") Annotation( "TAO"^^xsd:string) "relationship loss: part_of cardinal system (TAO:0000096)[TAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000111") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0072528305 Kardong KV, Vertebrates: Comparative Anatomy, Function, Evolution (2006) p.462") "In primitive vertebrates, the basic early embryonic pattern is retained, and blood from anterior and posterior systemic tissues is returned in anterior and posterior cardinal veins, both pairs of veins uniting in common cardinal veins near the heart. In derived vertebrates, the cardinals appear but usually persist only in the embryo, being functionally replaced by alternative adult vessels, the precava and postcava (anterior and posterior venae cavae).[well established][VHOG]") AnnotationAssertion(Annotation( "WP"^^xsd:string) "join with the corresponding right and left cardinal veins to form the left common cardinal veins, which empty in the sinus venosus. Most of the posterior cardinal veins regress, what remains of them forms the renal segment of the inferior vena cava and the common iliac veins. Later in the development stages, the posterior cardinal veins are replaced by the subcardinal and supracardinal veins. The subcardinal veins form part of the inferior vena cava, renal veins and gonadal veins. The supracardinal veins form part of the inferior vena cava, the intercostal veins, hemiazygos vein and azygos vein") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010511") AnnotationAssertion( "BTO:0004386") AnnotationAssertion( "EHDAA2:0001486") AnnotationAssertion( "EHDAA:1316") AnnotationAssertion( "EMAPA:16357") AnnotationAssertion( "FMA:70314") AnnotationAssertion( "NCIT:C34257") AnnotationAssertion( "TAO:0000477") AnnotationAssertion(Annotation( "ncithesaurus:Posterior_Cardinal_Vein") "UMLS:C0231087") AnnotationAssertion( "VHOG:0000111") AnnotationAssertion( "XAO:0000241") AnnotationAssertion( "ZFA:0000477") AnnotationAssertion( "uberon") AnnotationAssertion( "PCV") AnnotationAssertion( "axial vein") AnnotationAssertion( "caudal cardinal veins") AnnotationAssertion(Annotation( ) "inferior cardinal vein") AnnotationAssertion(Annotation( ) Annotation( "AAO:0010511") Annotation( "FMA:70314") "postcardinal vein") AnnotationAssertion( "UBERON:0002065") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "posterior cardinal vein") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses(Annotation( "lexical"^^xsd:string) ) # Class: (umbilical vein) AnnotationAssertion(Annotation( ) Annotation( ) "The umbilical vein is a blood vessel present during fetal development that carries oxygenated blood from the placenta to the growing fetus. [WP,unvetted].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0001509") AnnotationAssertion( "CALOHA:TS-1082") AnnotationAssertion( "EFO:0001940") AnnotationAssertion( "EHDAA:1034") AnnotationAssertion( "EHDAA:488") AnnotationAssertion( "EMAPA:16243") AnnotationAssertion( "EMAPA:16375") AnnotationAssertion( "EV:0100392") AnnotationAssertion( "FMA:70317") AnnotationAssertion( "GAID:542") AnnotationAssertion( "MA:0002249") AnnotationAssertion( "MESH:D014471") AnnotationAssertion( "NCIT:C33830") AnnotationAssertion( "OpenCyc:Mx4rdu17MmWaEd2AAABQjYGu0g") AnnotationAssertion( "RETIRED_EHDAA2:0002107") AnnotationAssertion(Annotation( "ncithesaurus:Umbilical_Vein") "UMLS:C0041637") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "vena umbilicalis") AnnotationAssertion( "UBERON:0002066") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "umbilical vein") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/e/ee/Gray502.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) # Class: (dermis) AnnotationAssertion(Annotation( ) Annotation( "ZFIN:curator"^^xsd:string) "The dermis is a layer of skin between the epidermis (with which it makes up the skin) and subcutaneous tissues, and is composed of two layers, the papillary and reticular dermis[WP].") AnnotationAssertion( "Consider adding a layer-of-skin grouping class for all skin layers") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0001119") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "A collagenous layer of the skin subjacent to the epidermis and covering the hypodermis. It contains various types of cells (e.g. fibroblasts, pigment cells, nerve, blood vessels and scales. Le Guellec et al, 2004.[TAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000108") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0072528305 Kardong KV, Vertebrates: Comparative Anatomy, Function, Evolution (2006) p.231-232 see also p.209 and p.228 and Figure 6-1") "When approaching controversies surrounding skin evolution, we need to remember that the skin consists of two layers, an epidermis and a dermis, not a single evolving structure. (...) It is little wonder that controversies about homology exist. If we think of the epidermis, the dermis, and their interactions as an evolving unit, then their specialized products (hair, feathers, and reptilian scales) are broadly homologous.[well established][VHOG]") AnnotationAssertion( "dermal") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0000128") AnnotationAssertion( "BTO:0000294") AnnotationAssertion( "CALOHA:TS-2076") AnnotationAssertion( "EFO:0000953") AnnotationAssertion( "EMAPA:17527") AnnotationAssertion( "EV:0100154") AnnotationAssertion( "FMA:70323") AnnotationAssertion( "GAID:1321") AnnotationAssertion( "MA:0000152") AnnotationAssertion( "MAT:0000153") AnnotationAssertion( "MESH:D020405") AnnotationAssertion( "MIAA:0000153") AnnotationAssertion( "NCIT:C12701") AnnotationAssertion( "TAO:0001119") AnnotationAssertion(Annotation( "ncithesaurus:Dermis") "UMLS:C0011646") AnnotationAssertion( "VHOG:0000108") AnnotationAssertion( "XAO:0000217") AnnotationAssertion( "ZFA:0001119") AnnotationAssertion( "vertebrate dermis") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "corium") AnnotationAssertion(Annotation( "BTO:0000294") "corium") AnnotationAssertion(Annotation( "BTO:0000294") "cutis") AnnotationAssertion( "UBERON:0002067") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "dermis") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/2/23/EpidermisPainted.svg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "definitional"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (urachus) AnnotationAssertion(Annotation( "MP:0011852") Annotation( "MP:anna"^^xsd:string) "A fibrous remnant of the allantoic stalk, a narrow fetal canal connecting the apex of the urinary bladder with the umbilicus located in the space of Retzius, between the transversalis fascia anteriorly and the peritoneum posteriorly. its lumen is normally obliterated during development, transforming the urachus into a solid cord, a functionless remnant that persists throughout life as the median umbilical ligament; failure of complete lumen obliteration may result in distinct congenital urachal remnant anomalies[MP].") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000735") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( ) "A fetal canal connecting the bladder with the allantois, persisting throughout life as a cord (median umbilical ligament). [TFD][VHOG]") AnnotationAssertion( "urachal") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0002137") AnnotationAssertion( "EHDAA:7016") AnnotationAssertion( "EHDAA:9332") AnnotationAssertion( "EMAPA:18323") AnnotationAssertion( "FMA:70343") AnnotationAssertion( "GAID:1313") AnnotationAssertion( "MA:0001701") AnnotationAssertion( "MESH:A16.254.835") AnnotationAssertion( "NCIT:C12338") AnnotationAssertion( "RETIRED_EHDAA2:0002138") AnnotationAssertion(Annotation( "ncithesaurus:Urachus") "UMLS:C0041916") AnnotationAssertion( "VHOG:0000735") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002068") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "urachus") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/6/63/Gray1156.png"^^xsd:anyURI) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ) SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (stratum granulosum of epidermis) AnnotationAssertion(Annotation( "ISBN:0-683-40008-8"^^xsd:string) Annotation( "MP:0001239") "The layer of flattened cells containing basophilic granules of keratohyalin and lying just above the stratum spinosum (spiny layer) of the epidermis.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0000361") AnnotationAssertion( "EMAPA:32786") AnnotationAssertion( "FMA:70344") AnnotationAssertion( "MA:0000805") AnnotationAssertion( "NCIT:C33627") AnnotationAssertion(Annotation( "ncithesaurus:Stratum_Granulosum") "UMLS:C0221923") AnnotationAssertion( "epidermis stratum granulosum") AnnotationAssertion(Annotation( "FMA:70344") "granular layer of epidermis") AnnotationAssertion(Annotation( "BTO:0000361") "stratum granulosum") AnnotationAssertion( "uberon") AnnotationAssertion( "epidermis granular layer") AnnotationAssertion( "UBERON:0002069") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "stratum granulosum of epidermis") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (superior pancreaticoduodenal artery) AnnotationAssertion(Annotation( ) "The superior pancreaticoduodenal artery is an artery that supplies blood to the duodenum and pancreas. It is a branch of the gastroduodenal artery, which comes from the common hepatic artery of the celiac trunk. The common hepatic itself becomes the proper hepatic after giving off the gastroduodenal artery and goes on to supply the right and left lobes of the liver. The term superior distinguishes the superior pancreaticoduodenal artery from the inferior pancreaticoduodenal artery, which a branch of the superior mesenteric artery. These arteries, together with the pancreatic branches of the splenic artery, form connections or anastomoses with one another, allowing blood to perfuse the pancreas and duodenum through multiple channels. The artery splits into two branches: the anterior superior pancreaticoduodenal artery supplies the anterior margins of the duodenum and pancreas the posterior superior pancreaticoduodenal artery supplies the posterior margins of these organs [WP,unvetted].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37121") AnnotationAssertion( "FMA:70437") AnnotationAssertion( "MA:0002015") AnnotationAssertion( "NCIT:C52742") AnnotationAssertion(Annotation( "ncithesaurus:Superior_Pancreatico-Duodenal_Artery") "UMLS:C0226317") AnnotationAssertion( "superior pancreatico-duodenal artery") AnnotationAssertion(Annotation( ) "superior pancreatoduodenal artery") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "arteria pancreaticoduodenalis superior") AnnotationAssertion( "UBERON:0002070") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "superior pancreaticoduodenal artery") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/3/3b/Gray533.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (stratum lucidum of epidermis) AnnotationAssertion(Annotation( ) Annotation( "MP:0009610") "The layer of lightly staining corneocytes found between the stratum granulosum and stratum corneum layers; found primarily in the thick epidermis of the palmar and plantar skin and is composed of three to five layers of dead, flattened keratinocytes.") AnnotationAssertion(Annotation( "BTO:0000364") "stratum lucidum") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0000364") AnnotationAssertion( "EMAPA:35314") AnnotationAssertion( "FMA:70540") AnnotationAssertion( "MA:0000806") AnnotationAssertion( "NCIT:C33624") AnnotationAssertion( "NCIT:C33629") AnnotationAssertion(Annotation( "ncithesaurus:Stratum_Lucidum") "UMLS:C0221922") AnnotationAssertion(Annotation( "ncithesaurus:Stratum_Conjunctum") "UMLS:C1514985") AnnotationAssertion( "epidermis stratum lucidum") AnnotationAssertion( "stratum conjunctum of epidermis") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002071") AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "Located between the stratum granulosum and stratum corneum layers, it is composed of three to five layers of dead, flattened keratinocytes. The keratinocytes of the stratum lucidum do not feature distinct boundaries and are filled with eleidin, an intermediate form of keratin.") AnnotationAssertion(rdfs:label "stratum lucidum of epidermis") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (hypodermis) AnnotationAssertion(Annotation( ) "Lowermost layer of the integumentary system in vertebrates. Types of cells that are found in the hypodermis are fibroblasts, adipose cells, and macrophages. It is derived from the mesoderm, but unlike the dermis, it is not derived from the dermatome region of the mesoderm. The hypodermis is used mainly for fat storage[WP].") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0001136") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "A layer separating the inner face of the dermis from the subjacent muscle cells. It is covered on both sides by a basement membrane. It contains pigment cells. Le Guellec et al, 2004.[TAO]") AnnotationAssertion(Annotation( "FMA:70544") "A layer separating the inner face of the dermis from the subjacent muscle cells. It is covered on both sides by a basement membrane. It contains pigment cells[FMA:70544].") AnnotationAssertion( "hypodermal") AnnotationAssertion( "subcutaneous") AnnotationAssertion( "subcutaneus") AnnotationAssertion(Annotation( "BTO"^^xsd:string) "BTO has 'subcutis', as part of dermis. We follow FMA in having distinct classes for hypodermis and superficial fascia, and including these as part of the non-skin intgeument.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0001314") AnnotationAssertion( "CALOHA:TS-2366") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37505") AnnotationAssertion( "FMA:70544") AnnotationAssertion( "NCIT:C33645") AnnotationAssertion( "TAO:0001136") AnnotationAssertion(Annotation( "ncithesaurus:Subcutis") "UMLS:C0278403") AnnotationAssertion( "ZFA:0001136") AnnotationAssertion( "hypoderm") AnnotationAssertion( "vertebrate hypodermis") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0004525") "sub-tegumental tissue") AnnotationAssertion(Annotation( ) "subcutaneous tissue") AnnotationAssertion( "subcutis") AnnotationAssertion(Annotation( "BTO:0004525") "subtegumental tissue") AnnotationAssertion(Annotation( ) "superficial fascia") AnnotationAssertion(Annotation( ) Annotation( ) "tela subcutanea") AnnotationAssertion( "UBERON:0002072") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "hypodermis") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/6/6d/Skin.svg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "ZFA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA-modified") ObjectSomeValuesFrom( )) # Class: (hair follicle) AnnotationAssertion(Annotation( ) "A tube-like opening in the epidermis where the hair shaft develops and into which the sebaceous glands open[GO].") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001268") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-4431998051 Morioka K, Hair follicle: differentiation under the electron microscope, An atlas (2005) p.3") "The earliest reliable record of hair is found in a fossil of the Paleocene period, in which the structure of hair cuticles is preserved. Its appearance suggests that the complicated structure of the hair follicle, closely similar to that of present-day mammals, had already appeared at this time.[well established][VHOG]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0000554") AnnotationAssertion( "CALOHA:TS-0432") AnnotationAssertion( "EFO:0002464") AnnotationAssertion( "EMAPA:18771") AnnotationAssertion( "EMAPA:29741") AnnotationAssertion( "EV:0100156") AnnotationAssertion( "FMA:70660") AnnotationAssertion( "GAID:934") AnnotationAssertion( "MA:0000154") AnnotationAssertion( "MESH:D018859") AnnotationAssertion( "NCIT:C13317") AnnotationAssertion( "OpenCyc:Mx4rvVjOI5wpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Hair_Follicle") "UMLS:C0221971") AnnotationAssertion( "VHOG:0001268") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "folliculus pili") AnnotationAssertion( "UBERON:0002073") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "Development notes:Formation largely takes place during fetal and perinatal skin development. However, after skin wounding de novo hair follicle formation may also occur in adult mouse and rabbit skin[DOI:10.1016/j.cub.2008.12.005].") AnnotationAssertion(rdfs:label "hair follicle") AnnotationAssertion( "Hair:follicle-en.svg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) SubClassOf( ObjectSomeValuesFrom( )) # Class: (hair shaft) AnnotationAssertion(Annotation( ) "The main part of the hair which is composed of trichocytes and is divided into the cortex and medulla.") AnnotationAssertion( "TODO - add distinct subclasses for coat hair vs vibrissa hair") AnnotationAssertion( "TODO - check definition of trichocyte in CL") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0004672") AnnotationAssertion( "EMAPA:36498") AnnotationAssertion( "FMA:70728") AnnotationAssertion( "MA:0000159") AnnotationAssertion( "NCIT:C33543") AnnotationAssertion(Annotation( "ncithesaurus:Shaft_of_the_Hair") "UMLS:C0221961") AnnotationAssertion( "shaft of hair") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0004672") "scapus pili") AnnotationAssertion( "UBERON:0002074") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "hair shaft") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (viscus) AnnotationAssertion(Annotation( ) Annotation( ) Annotation( "BTO:0001491") "An organ that is located within the body cavity (or in its extension, in the scrotum); it consists of organ parts that are embryologically derived from endoderm, splanchnic mesoderm or intermediate mesoderm; together with other organs, the viscus constitutes the respiratory, gastrointestinal, urinary, reproductive and immune systems, or is the central organ of the cardiovascular system. Examples: heart, lung, esophagus, kidney, ovary, spleen.") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0010386") Annotation( "AAO"^^xsd:string) Annotation( "BTO:0001491") "An internal organ of the body; especially: one (as the heart, liver, or intestine) located in the great cavity of the trunk proper.[AAO]") AnnotationAssertion(Annotation( "FMA"^^xsd:string) "general anatomical term in FMA. Note that we place the MA class here temporarily, although properly systems should be distinguished from organs.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010386") AnnotationAssertion( "BTO:0001491") AnnotationAssertion( "EHDAA:512") AnnotationAssertion( "EMAPA:16245") AnnotationAssertion( "FMA:7085") AnnotationAssertion( "MA:0000019") AnnotationAssertion( "MESH:D014781") AnnotationAssertion( "NCIT:C28287") AnnotationAssertion( "RETIRED_EHDAA2:0002201") AnnotationAssertion(Annotation( "ncithesaurus:Viscera") "UMLS:C0042779") AnnotationAssertion( "XAO:0003034") AnnotationAssertion(Annotation( "RETIRED_EHDAA2:0002201") "visceral organ") AnnotationAssertion(Annotation( "MA:0000019") "visceral organ system") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0001491") "splanchnic tissue") AnnotationAssertion( "viscera") AnnotationAssertion(Annotation( "BTO:0001491") "visceral tissue") AnnotationAssertion( "UBERON:0002075") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "viscus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (cuticle of hair) AnnotationAssertion(Annotation( "MGI:llw2") Annotation( "MP:0003810") "Smooth and glossy outer protective cell layer of hair shaft.") AnnotationAssertion( "EMAPA:35388") AnnotationAssertion( "FMA:70933") AnnotationAssertion( "MA:0000157") AnnotationAssertion( "hair cuticle") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002076") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "cuticle of hair") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (cortex of hair) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A cortex that is part of a hair [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:35387") AnnotationAssertion( "FMA:70934") AnnotationAssertion( "MA:0000156") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "coat hair cortex") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "coat/hair cortex") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "cortex of coat hair") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "cortex of coat/hair") AnnotationAssertion( "hair cortex") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002077") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "cortex of hair") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (right cardiac atrium) AnnotationAssertion(Annotation( ) Annotation( ) "A cardiac atrium that is in the left side of the heart. It receives deoxygenated blood. In mammals, this comes from the superior and inferior vena cava and the coronary sinus, and pumps it into the right ventricle through the tricuspid valve.") AnnotationAssertion(Annotation( "FMA:7096") "Right cardiac chamber which is continuous with the superior vena cava and inferior vena cava.[FMA]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000328") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0030223693 Liem KF, Bemis WE, Walker WF, Grande L, Functional Anatomy of the Vertebrates: An Evolutionary Perspective (2001) p.620") "The tetrapod clade develops a complete atrial septum and loses the fifth aortic arch altogether.[well established][VHOG]") AnnotationAssertion( "https://github.com/obophenotype/uberon/wiki/Modeling-paired-structures-Design-Pattern"^^xsd:anyURI) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010248") AnnotationAssertion( "BTO:0001703") AnnotationAssertion( "EHDAA2:0000290") AnnotationAssertion( "EMAPA:17321") AnnotationAssertion( "FMA:7096") AnnotationAssertion( "MA:0000075") AnnotationAssertion( "NCIT:C12868") AnnotationAssertion( "OpenCyc:Mx4runNcs6fqEdudWQACs5b6Bw") AnnotationAssertion( "OpenCyc:Mx8Ngh4rvgHsHZwpEbGdrcN5Y29ycB4rDJ89oqgPEdudWQACs5b6Bw") AnnotationAssertion(Annotation( "ncithesaurus:Right_Atrium") "UMLS:C0225844") AnnotationAssertion( "VHOG:0000328") AnnotationAssertion( "XAO:0003192") AnnotationAssertion( "galen:RightAtrium") AnnotationAssertion( "cardiac right atrium") AnnotationAssertion(Annotation( "MA:0000075") "heart right atrium") AnnotationAssertion(Annotation( "VHOG:0000328") "right atrium") AnnotationAssertion( "right atrium of heart") AnnotationAssertion( "right cardiac atrium") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "atrium dextrum") AnnotationAssertion( "UBERON:0002078") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "right cardiac atrium") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/2/20/Diagram_of_the_human_heart_%28cropped%29.svg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) # Class: (left cardiac atrium) AnnotationAssertion(Annotation( ) Annotation( ) "A cardiac atrium that is in the left side of the heart. It receives oxygenated blood from the pulmonary veins, In mammals this is pumped into the left ventricle, via the Mitral valve.") AnnotationAssertion(Annotation( "FMA:7097") "Left cardiac chamber which is continuous with the pulmonary venous trunk.[FMA]") AnnotationAssertion(Annotation( "XAO:EJS") "The chamber of the heart that receives blood from the lungs[XAO:EJS].") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000369") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0030223693 Liem KF, Bemis WE, Walker WF, Grande L, Functional Anatomy of the Vertebrates: An Evolutionary Perspective (2001) p.620") "The tetrapod clade develops a complete atrial septum and loses the fifth aortic arch altogether.[well established][VHOG]") AnnotationAssertion( "https://github.com/obophenotype/uberon/wiki/Modeling-paired-structures-Design-Pattern"^^xsd:anyURI) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010247") AnnotationAssertion( "BTO:0001702") AnnotationAssertion( "EHDAA2:0000275") AnnotationAssertion( "EMAPA:17315") AnnotationAssertion( "FMA:7097") AnnotationAssertion( "MA:0000074") AnnotationAssertion( "NCIT:C12869") AnnotationAssertion( "OpenCyc:Mx4rkJN1AagEEdudWQACs5b6Bw") AnnotationAssertion( "OpenCyc:Mx8Ngh4rvgIFoJwpEbGdrcN5Y29ycB4rDJ89oqgPEdudWQACs5b6Bw") AnnotationAssertion(Annotation( "ncithesaurus:Left_Atrium") "UMLS:C0225860") AnnotationAssertion( "VHOG:0000369") AnnotationAssertion( "XAO:0003191") AnnotationAssertion( "galen:LeftAtrium") AnnotationAssertion(Annotation( ) Annotation( ) "atrium sinistrum") AnnotationAssertion( "cardiac left atrium") AnnotationAssertion(Annotation( "MA:0000074") "heart left atrium") AnnotationAssertion(Annotation( "VHOG:0000369") "left atrium") AnnotationAssertion( "left atrium of heart") AnnotationAssertion( "left cardiac atrium") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002079") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "left cardiac atrium") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/2/20/Diagram_of_the_human_heart_%28cropped%29.svg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) # Class: (heart right ventricle) AnnotationAssertion(Annotation( ) "A cardiac ventricle that is in the right side of the heart.") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000717") Annotation( "VHOG"^^xsd:string) Annotation( ) "The muscular chamber on the right and in front of the left ventricle. It generally receives venous blood from the right atrium and conveys it into the pulmonary artery. [(1988)_Dorian_AF, Amsterdam, Dorian_AF, Elsevier's_encyclopaedic_dictionary_of_medicine, Part_B._Anatomy, Part_B:_Anatomy_(1988)_Amsterdam_etc.:_Elsevier, Part_B:_Anatomy_(1988)_Amsterdam_etc.:_Elsevier's_Encyclopaedic_Dictionary_of_Medicine][VHOG]") AnnotationAssertion( "https://github.com/obophenotype/uberon/wiki/Modeling-paired-structures-Design-Pattern"^^xsd:anyURI) AnnotationAssertion( "In mammals continuous with the pulmonary arteries") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0001630") AnnotationAssertion( "CALOHA:TS-0443") AnnotationAssertion( "EHDAA2:0000196") AnnotationAssertion( "EMAPA:17340") AnnotationAssertion( "FMA:7098") AnnotationAssertion( "MA:0000093") AnnotationAssertion( "NCIT:C12870") AnnotationAssertion( "OpenCyc:Mx4rRMlc0KgNEdudWQACs5b6Bw") AnnotationAssertion( "OpenCyc:Mx8Ngh4rvgHsHZwpEbGdrcN5Y29ycB4rvVjj1pwpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Right_Ventricle") "UMLS:C0225883") AnnotationAssertion( "VHOG:0000717") AnnotationAssertion( "galen:RightVentricle") AnnotationAssertion( "cardiac right ventricle") AnnotationAssertion(Annotation( "FMA:7098") "right ventricle") AnnotationAssertion( "right ventricle of heart") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "EMAPA:17340") "right cardiac ventricle") AnnotationAssertion(Annotation( ) Annotation( ) "ventriculus dexter") AnnotationAssertion( "UBERON:0002080") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "heart right ventricle") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/2/20/Diagram_of_the_human_heart_%28cropped%29.svg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "cjm"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (cardiac atrium) AnnotationAssertion(Annotation( ) Annotation( ) "Cardiac chamber in which blood enters the heart.") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0000471") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "One of four heart chambers.[TAO]") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0010246") Annotation( "AAO"^^xsd:string) Annotation( "AAO:BJB"^^xsd:string) "One of two chambers of the heart which receive blood from the veins and forces it by muscular contration to the ventricle.[AAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000175") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0721676678 Romer AS, Vertebrate body (1970) p.428") "In the primitive vertebrate heart the four chambers are: 1. Sinus venosus (...) 2. Atrium (...) 3. Ventricle (...) 4. Conus arteriosus (...).[well established][VHOG]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010246") AnnotationAssertion( "BTO:0000903") AnnotationAssertion( "CALOHA:TS-0437") AnnotationAssertion( "EFO:0000277") AnnotationAssertion( "EHDAA2:0000154") AnnotationAssertion( "EHDAA:1265") AnnotationAssertion( "EMAPA:16688") AnnotationAssertion( "EV:0100019") AnnotationAssertion( "FMA:7099") AnnotationAssertion( "GAID:555") AnnotationAssertion( "MA:0000073") AnnotationAssertion( "MAT:0000496") AnnotationAssertion( "MESH:D006325") AnnotationAssertion( "NCIT:C12728") AnnotationAssertion( "TAO:0000471") AnnotationAssertion(Annotation( "ncithesaurus:Cardiac_Atrium") "UMLS:C0018792") AnnotationAssertion( "VHOG:0000175") AnnotationAssertion( "ZFA:0000471") AnnotationAssertion( "galen:Atrium") AnnotationAssertion(Annotation( ) "atria") AnnotationAssertion(Annotation( "ZFA:0000471") "atrium") AnnotationAssertion( "atrium of heart") AnnotationAssertion(Annotation( ) "cardiac atria") AnnotationAssertion( "heart atrium") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0000903") "atrial tissue") AnnotationAssertion( "UBERON:0002081") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "cardiac atrium") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (cardiac ventricle) AnnotationAssertion(Annotation( ) Annotation( ) "Cardiac chamber through which blood leaves the heart.") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0010249") Annotation( "AAO"^^xsd:string) Annotation( "AAO:BJB"^^xsd:string) "A chamber of the heart that receives blood from one or more atria and pumps it by muscular contraction into the arteries.[AAO]") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0000009") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "One of four heart chambers.[TAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000435") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0721676678 Romer AS, Vertebrate body (1970) p.428") "In the primitive vertebrate heart the four chambers are: 1. Sinus venosus (...) 2. Atrium (...) 3. Ventricle (...) 4. Conus arteriosus (...)[well established][VHOG]") AnnotationAssertion( "ventricle") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010249") AnnotationAssertion( "BTO:0000862") AnnotationAssertion( "CALOHA:TS-0444") AnnotationAssertion( "EFO:0000317") AnnotationAssertion( "EHDAA2:0004164") AnnotationAssertion( "EHDAA:1912") AnnotationAssertion( "EMAPA:17331") AnnotationAssertion( "EV:0100020") AnnotationAssertion( "FMA:7100") AnnotationAssertion( "GAID:568") AnnotationAssertion( "MA:0000091") AnnotationAssertion( "MAT:0000497") AnnotationAssertion( "MESH:D006352") AnnotationAssertion( "NCIT:C12730") AnnotationAssertion( "OpenCyc:Mx4rvVjj1pwpEbGdrcN5Y29ycA") AnnotationAssertion( "TAO:0000009") AnnotationAssertion(Annotation( "ncithesaurus:Cardiac_Ventricle") "UMLS:C0018827") AnnotationAssertion( "VHOG:0000435") AnnotationAssertion( "XAO:0003193") AnnotationAssertion( "ZFA:0000009") AnnotationAssertion( "galen:Ventricle") AnnotationAssertion( "heart ventricle") AnnotationAssertion( "lower chamber of heart") AnnotationAssertion( "ventricle of heart") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002082") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "cardiac ventricle") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "Bgee:AN"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (ductus venosus) AnnotationAssertion(Annotation( "VHOG:0000924") "The vascular channel in the fetus passing through the liver and joining the umbilical vein with the inferior vena cava.") AnnotationAssertion( "add class for fetal shunt?") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000924") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( ) "The vascular channel in the fetus passing through the liver and joining the umbilical vein with the inferior vena cava. [TFD][VHOG]") AnnotationAssertion(Annotation( "WP"^^xsd:string) "Ductus venosus naturally closes during the first week of life in most full-term neonates; however, it may take much longer to close in pre-term neonates. Functional closure occurs within minutes of birth. Structural closure in term babies occurs within 3 to 7 days. After it closes, the remnant is known as ligamentum venosum") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0000422") AnnotationAssertion( "EHDAA:5402") AnnotationAssertion( "EMAPA:17343") AnnotationAssertion( "FMA:71007") AnnotationAssertion( "MA:0002111") AnnotationAssertion( "NCIT:C34143") AnnotationAssertion(Annotation( "ncithesaurus:Ductus_Venosus") "UMLS:C1288338") AnnotationAssertion( "VHOG:0000924") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002083") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "ductus venosus") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/e/ee/Gray502.png"^^xsd:anyURI) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "cjm"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (heart left ventricle) AnnotationAssertion(Annotation( ) "A cardiac ventricle that is in the left side of the heart.") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000718") Annotation( "VHOG"^^xsd:string) Annotation( ) "Thick-walled muscular chamber constituting the left border and apex of the heart. It receives oxygenated blood from the left atrium through the mitral orifice and send it off into the aorta. [Dorian_AF, Elsevier's_encyclopaedic_dictionary_of_medicine, Part_B:_Anatomy_(1988)_Amsterdam_etc.:_Elsevier][VHOG]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000718") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "DOI:10.1126/science.1190181 Stolfi A, Gainous TB, Young JJ, Mori A, Levine M, Christiaen L, Early chordate origins of the vertebrate second heart field. Science (2010)") "The vertebrate heart initially forms as a tube from a population of precursor cells termed the first heart field (FHF). Cells from the adjacent second heart field (SHF) are then progressively added to the developing heart. In avian and mammalian hearts, the FHF contributes mainly to the left ventricle, whereas the SHF gives rise to the outflow tract and large portions of the right ventricle and atria. Both fields arise from common mesodermal progenitors, although the detailed lineage relationships between FHF and SHF remain uncertain.[well established][VHOG]") AnnotationAssertion( "https://github.com/obophenotype/uberon/wiki/Modeling-paired-structures-Design-Pattern"^^xsd:anyURI) AnnotationAssertion( "In mammals continuous with aorta") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0001629") AnnotationAssertion( "CALOHA:TS-0439") AnnotationAssertion( "EHDAA2:0002178") AnnotationAssertion( "EMAPA:17337") AnnotationAssertion( "FMA:7101") AnnotationAssertion( "MA:0000092") AnnotationAssertion( "NCIT:C12871") AnnotationAssertion( "OpenCyc:Mx4rtW8v46gEEdudWQACs5b6Bw") AnnotationAssertion( "OpenCyc:Mx8Ngh4rvgIFoJwpEbGdrcN5Y29ycB4rvVjj1pwpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Left_Ventricle") "UMLS:C0225897") AnnotationAssertion( "VHOG:0000718") AnnotationAssertion( "galen:LeftVentricle") AnnotationAssertion( "cardiac left ventricle") AnnotationAssertion( "left cardiac ventricle") AnnotationAssertion(Annotation( "FMA:7101") "left ventricle") AnnotationAssertion( "left ventricle of heart") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "ventriculus sinister cordis") AnnotationAssertion( "UBERON:0002084") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "heart left ventricle") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/2/20/Diagram_of_the_human_heart_%28cropped%29.svg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "GO"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (interatrial septum) AnnotationAssertion(Annotation( ) "A cardiac septum that divides the left and right atria of the heart.") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000385") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( ) "The partition separating the right and left atria of the heart. [TFD][VHOG]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000385") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0030223693 Liem KF, Bemis WE, Walker WF, Grande L, Functional Anatomy of the Vertebrates: An Evolutionary Perspective (2001) p.620") "The tetrapod clade develops a complete atrial septum and loses the fifth aortic arch altogether.[well established][VHOG]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0000838") AnnotationAssertion( "EHDAA:1896") AnnotationAssertion( "EMAPA:17011") AnnotationAssertion( "FMA:7108") AnnotationAssertion( "MA:0000084") AnnotationAssertion( "NCIT:C32818") AnnotationAssertion( "OpenCyc:Mx4rpd49nLYEEduAAAACs2IKfQ") AnnotationAssertion( "OpenCyc:Mx4rwGvku5wpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Interatrial_Septum") "UMLS:C0225836") AnnotationAssertion( "VHOG:0000385") AnnotationAssertion( "galen:InteratrialSeptum") AnnotationAssertion( "atrial septum") AnnotationAssertion( "atrium septum") AnnotationAssertion( "interatrial septal wall") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002085") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "interatrial septum") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/6/6c/Gray493.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (sinoatrial valve) AnnotationAssertion(Annotation( ) "A valve at the opening of the sinus venosus into the primordial atrium[TFD,modified].") AnnotationAssertion( "in humans and mouse this is the opening from SV into right atrium. This class represents the valve connecting the SV to any atrium and is applicable to animals with a single atrium") AnnotationAssertion( "FMA:71120") AnnotationAssertion( "TAO:0000680") AnnotationAssertion( "ZFA:0000680") AnnotationAssertion(Annotation( "MP:0011646") "sinuatrial valve") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "ZFA:0000680") Annotation( ) "sinoatrial valves") AnnotationAssertion( "UBERON:0002086") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "sinoatrial valve") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "ZFA-modified"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "ZFA-modified"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (atrioventricular canal) AnnotationAssertion(Annotation( ) Annotation( ) Annotation( "ZFA:0001315") "The part of the heart connecting the atrium to the cardiac ventricle[ZFA]. In the developing heart, the constriction between the atrium and ventricle constitutes the atrial canal, and indicates the site of the future atrioventricular valves[WP].") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001473") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( ) "The canal connecting the primitive atrium and ventricle in fishes and amniotes embryo. [TFD][VHOG]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001473") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "DOI:10.1016/j.ddmec.2004.08.004 Haramis APG, Clevers HC, Holehearted: genetic approaches to congenital cardiac valve malformations. Drug Discovery Today: Disease Mechanisms (2004)") "The heart is the first organ to form and function in a vertebrate. (...) Septation of the AV canal is initiated with the formation of inferior and superior endocardial cushions in response to signaling from the overlying myocardium. (...) Analysis of zebrafish mutants with cardiovascular defects uncovered a previously unexpected level of conservation between zebrafish and human cardiovascular physiology.[uncertain][VHOG]") AnnotationAssertion( "In the embryo, the atrioventricular canal delays the impulse from atrium to ventricle[PMID:22984480]") AnnotationAssertion( "The right side of the AVC becomes the tricuspid valve whereas the left side of the AVC will become the bicuspid valve") AnnotationAssertion(Annotation( "EHDAA2"^^xsd:string) "this is a lumen in EHDAA2") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EHDAA:764") AnnotationAssertion( "EMAPA:16546") AnnotationAssertion( "FMA:71121") AnnotationAssertion( "TAO:0001315") AnnotationAssertion( "VHOG:0001473") AnnotationAssertion( "XAO:0004123") AnnotationAssertion( "ZFA:0001315") AnnotationAssertion( "AV canal") AnnotationAssertion(Annotation( "ZFA:0001315") Annotation( ) "AVC") AnnotationAssertion(Annotation( ) "atrial canal") AnnotationAssertion(Annotation( "EHDAA2:0000152") "atrio-ventricular canal") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "canalis atrioventricularis") AnnotationAssertion(Annotation( "EMAPA:16546") "ependymal canal") AnnotationAssertion( "UBERON:0002087") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "atrioventricular canal") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/d/d8/Gray464.png"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "Bgee:AN"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (lateral thoracic vein) AnnotationAssertion(Annotation( ) "The lateral thoracic vein is a tributary of the axillary vein. It runs with the lateral thoracic artery and drains the serratus ventralis muscle and the Pectoralis major muscle. Normally, the thoracoepigastric vein exists between this vein and superficial epigastric vein (a tributary of femoral vein), to act as a shunt for blood if the portal system (through the liver) develops hypertension or a blockage. [WP,unvetted].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37163") AnnotationAssertion( "FMA:71210") AnnotationAssertion( "MA:0002162") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "vena thoracica lateralis") AnnotationAssertion( "UBERON:0002088") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "lateral thoracic vein") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/e/e9/Gray576.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA/obol"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA/obol"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (thoracodorsal vein) AnnotationAssertion(Annotation( ) "Companion vein of the thoracodorsal artery, draining the apical part of the latissimus dorsi and merging with the circumflex scapular vein to form a subscapular vein.") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37198") AnnotationAssertion( "FMA:71213") AnnotationAssertion( "MA:0002238") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002089") AnnotationAssertion(rdfs:label "thoracodorsal vein") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA/obol"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (postcranial axial skeleton) AnnotationAssertion(Annotation( ) Annotation( ) Annotation( "ZFA:0000317") "The postcranial subdivision of skeleton structural components forming the long axis of the vertebrate body; in Danio, consisting of the notochord, vertebrae, ribs, supraneurals, intermuscular bones, and unpaired median fins; in human consists of the bones of the vertebral column, the thoracic cage and the pelvis[ZFA+FMA].") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "VSAO:0000093") Annotation( "VSAO"^^xsd:string) Annotation( "PSPUB:0000170"^^xsd:string) "Skeletal subdivision of the central body axis including vertebrae, notochord, ribs, and sternum.[VSAO]") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0000034") Annotation( "AAO"^^xsd:string) Annotation( "AAO:LAP"^^xsd:string) "The axial skeleton is formed by the vertebral column, a metameric, semi-flexible, arched bar located in the dorsal part of the trunk, and is formed by a series of cartilaginous or bony vertebrae. It provides suspension for the appendicular skeleton and protection for the spinal nerve cord.[AAO]") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0000317") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "The post-cranial structural components forming the long axis of the vertebrate body; usually consists of the notochord, vertebrae, ribs, supraneurals, intermuscular bones, and unpaired median fins.[TAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000317") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "DOI:10.1186/1742-9994-8-4 Schilling N, Evolution of the axial system in craniates: morphology and function of the perivertebral musculature. Frontiers in Zoology (2011)") "The axial musculoskeletal system represents the plesiomorphic locomotor engine of the vertebrate body, playing a central role in locomotion. In craniates, the evolution of the postcranial skeleton is characterized by two major transformations. First, the axial skeleton became increasingly functionally and morphologically regionalized. Second, the axial-based locomotion plesiomorphic for craniates became progressively appendage-based with the evolution of extremities in tetrapods.[well established][VHOG]") AnnotationAssertion(Annotation( ) Annotation( "FMA:71221") "axial skeleton") AnnotationAssertion( "AAO:0000034") AnnotationAssertion( "EFO:0000942") AnnotationAssertion( "EHDAA2:0000161") AnnotationAssertion( "EHDAA:5049") AnnotationAssertion( "EMAPA:17214") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37721") AnnotationAssertion( "FMA:71221") AnnotationAssertion( "MA:0002986") AnnotationAssertion( "MAT:0000148") AnnotationAssertion( "MIAA:0000148") AnnotationAssertion( "TAO:0000317") AnnotationAssertion( "VHOG:0000317") AnnotationAssertion( "VSAO:0000093") AnnotationAssertion( "XAO:0003073") AnnotationAssertion( "ZFA:0000317") AnnotationAssertion( "post-cranial axial skeleton") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002090") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "previous some AOs had used the term 'axial skeleton' to include the skull. This is being resolved (see tracker items above). Status: MA - fixed.") AnnotationAssertion(rdfs:label "postcranial axial skeleton") AnnotationAssertion(rdfs:seeAlso "http://purl.obolibrary.org/obo/uberon/docs/The-axial-skeleton"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (appendicular skeleton) AnnotationAssertion(Annotation( ) Annotation( ) Annotation( "UBERONREF:0000003"^^xsd:string) "Subdivision of skeleton which which consists of all the skeletal elements in in the pectoral and pelvic appendage complexes[cjm].") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "VSAO:0000076") Annotation( "VSAO"^^xsd:string) Annotation( ) Annotation( "PSPUB:0000170"^^xsd:string) "Skeletal subdivision consisting of all the skeletal elements in the pectoral and pelvic appendage complexes.[VSAO]") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0000027") Annotation( "TAO"^^xsd:string) Annotation( "TAO:wd"^^xsd:string) "Skeletal system that consists of the paired fins (pectoral or pelvic fins).[TAO]") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0000747") Annotation( "AAO"^^xsd:string) Annotation( "AAO:LAP"^^xsd:string) "The pectoral and pelvic girdles, which articulate with the axial skeleton, together with their associated limbs, the forelimbs and hind limbs, form the appendicular skeleton.[AAO]") AnnotationAssertion(Annotation( "FMA"^^xsd:string) "ontologies differ in whether they treat the term appendicular skeleton as being the entire set of bones in the limbs, or whether the fore and hind limbs/fins are treated as seperate appendicular skeletons. Here we follow FMA, and treat the appendicular skeleton as the sum total of skeletal elements in the organism (this is evidenced by the fact that in FMA, skeleton of left/right upper/lower limb is part_of a appendicular skeleton, and subtypes of 'subdivision of appendicular skeleton'). We have separate classes such as 'skeleton of limb', and 'skeleton of hindlimb' for the 4 parts of the appendicular skeleton. In future the ZFA/TAO classes may be moved.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0000747") AnnotationAssertion( "EFO:0000951") AnnotationAssertion( "EMAPA:32729") AnnotationAssertion( "FMA:71222") AnnotationAssertion( "MA:0000290") AnnotationAssertion( "MAT:0000278") AnnotationAssertion( "MIAA:0000278") AnnotationAssertion( "NCIT:C49477") AnnotationAssertion(Annotation( "ncithesaurus:Appendicular_Skeleton") "UMLS:C0222646") AnnotationAssertion( "VHOG:0001666") AnnotationAssertion( "VSAO:0000076") AnnotationAssertion( "XAO:0003166") AnnotationAssertion( "appendicular skeleton") AnnotationAssertion(Annotation( ) "entire appendicular skeleton") AnnotationAssertion(Annotation( ) "paired fin skeleton") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "skeleton appendiculare") AnnotationAssertion( "UBERON:0002091") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "appendicular skeleton") AnnotationAssertion(rdfs:seeAlso "https://github.com/obophenotype/uberon/wiki/Appendages-and-the-appendicular-skeleton"^^xsd:anyURI) AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/7/7c/Appendicular_skeleton_diagram.svg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) SubClassOf( ObjectSomeValuesFrom( )) # Class: (brain dura mater) AnnotationAssertion(Annotation( "MP:0009025") "The fibrous membrane forming the outer of the three coverings that surrounds the brain within the cranial cavity; consists of two layers including the periosteal layer and the meningeal layer.") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000270") Annotation( "VHOG"^^xsd:string) Annotation( ) "The outermost and densest membrane of the three mammalian meninges covering the brain and spinal cord. [Elsevier's_encyclopaedic_dictionary_of_medicine, Part_B:_Anatomy_(1988)_Amsterdam_etc.:_Elsevier, adapted_from_Dorian_AF][VHOG]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000270") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0072528305 Kardong KV, Vertebrates: Comparative Anatomy, Function, Evolution (2006) p.639"^^xsd:string) "In fishes, the meninges consist of a single membrane, the primitive meninx, wrapped around the brain and spinal cord. With the adoption of terrestrial life, the meninges doubled. In amphibians, reptiles, and birds, the meninges include a thick outer dura mater derived from mesoderm and a thin inner secondary meninx. (...) In mammals, the dura mater persists, but division of the secondary meninx yields both the arachnoid and the pia mater from ectomesoderm.[well established][VHOG]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:32668") AnnotationAssertion( "EV:0100313") AnnotationAssertion( "FMA:71236") AnnotationAssertion( "MA:0000815") AnnotationAssertion( "NCIT:C49332") AnnotationAssertion(Annotation( "ncithesaurus:Cerebral_Dura_Mater") "UMLS:C0459393") AnnotationAssertion( "VHOG:0000270") AnnotationAssertion(Annotation( "FMA:71236") "cranial dura mater") AnnotationAssertion(Annotation( "FMA:71236") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "dura mater cranialis") AnnotationAssertion( "dura mater encephali") AnnotationAssertion( "dura mater of brain") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002092") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "brain dura mater") SubClassOf( ) SubClassOf( ) # Class: (spinal dura mater) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A dura mater that is part of a spinal cord [Automatically generated definition].") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000411") Annotation( "VHOG"^^xsd:string) Annotation( ) "The outermost and densest membrane of the three mammalian meninges covering the brain and spinal cord. [Elsevier's_encyclopaedic_dictionary_of_medicine, Part_B:_Anatomy_(1988)_Amsterdam_etc.:_Elsevier, adapted_from_Dorian_AF][VHOG]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000411") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0072528305 Kardong KV, Vertebrates: Comparative Anatomy, Function, Evolution (2006) p.639"^^xsd:string) "In fishes, the meninges consist of a single membrane, the primitive meninx, wrapped around the brain and spinal cord. With the adoption of terrestrial life, the meninges doubled. In amphibians, reptiles, and birds, the meninges include a thick outer dura mater derived from mesoderm and a thin inner secondary meninx. (...) In mammals, the dura mater persists, but division of the secondary meninx yields both the arachnoid and the pia mater from ectomesoderm.[well established][VHOG]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:17806") AnnotationAssertion( "FMA:71237") AnnotationAssertion( "MA:0001132") AnnotationAssertion( "NCIT:C49799") AnnotationAssertion(Annotation( "ncithesaurus:Spinal_Cord_Dura_Mater") "UMLS:C0228124") AnnotationAssertion( "VHOG:0000411") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "dura mater of neuraxis of spinal cord") AnnotationAssertion( "dura mater of spinal cord") AnnotationAssertion( "spinal cord dura mater") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "spinal cord dura mater of neuraxis") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002093") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "spinal dura mater") SubClassOf( ) SubClassOf( ) # Class: (interventricular septum) AnnotationAssertion(Annotation( "FMA:7133") "Cardiac septum which separates the right ventricle from the left ventricle.[FMA].") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000386") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( ) "The partition separating the right and left ventricles of the heart. [TFD][VHOG]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000386") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0721676678 Romer AS, Vertebrate body (1970) p.430") "The two most progressive vertebrate classes, the birds and mammals, have completed the ventricular septum and at long last have completely separated the two blood streams along the length of the major heart chambers. This development has obviously been brought about independently in the two cases, since mammals and birds have evolved independently from primitive reptiles.[well established][VHOG]") AnnotationAssertion(Annotation( "ISBN:0124020607") "involves the recruitment of myocardial cells as well as of non- muscular mesenchymal cells (Kaufman and Bard, 1999)") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0002483") AnnotationAssertion( "EFO:0001956") AnnotationAssertion( "EHDAA:2603") AnnotationAssertion( "EMAPA:17333") AnnotationAssertion( "FMA:7133") AnnotationAssertion( "MA:0000085") AnnotationAssertion( "NCIT:C32874") AnnotationAssertion( "OpenCyc:Mx4rwA7lp5wpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Interventricular_Septum") "UMLS:C0225870") AnnotationAssertion( "VHOG:0000386") AnnotationAssertion( "galen:InterventricularSeptum") AnnotationAssertion(Annotation( "MA:0000085") "heart interventricular septum") AnnotationAssertion(Annotation( "MA:0000085") "heart ventricular septum") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0002483") "interventricular septum of heart") AnnotationAssertion(Annotation( "BTO:0002483") "interventriculare cordis") AnnotationAssertion(Annotation( ) "intraventricular septum") AnnotationAssertion(Annotation( ) Annotation( ) "s. interventriculare cordis") AnnotationAssertion(Annotation( ) "septum inferius") AnnotationAssertion(Annotation( ) "septum membranaceum") AnnotationAssertion( "ventricle septum") AnnotationAssertion(Annotation( ) Annotation( "MA:0000085") "ventricular septum") AnnotationAssertion( "UBERON:0002094") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "interventricular septum") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/9/96/Gray498.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (mesentery) AnnotationAssertion(Annotation( ) Annotation( ) Annotation( ) Annotation( "FMA:7144") "Anatomical organ component composed of a double layer of serous membrane that suspends a viscus from the body wall or connects adjacent viscera and in doing so conveys blood vessels, lymphatics and nerves to and from the viscera. Examples: greater omentum, broad ligament of uterus, sigmoid mesocolon.") AnnotationAssertion( "mesenteric") AnnotationAssertion(Annotation( "FMA"^^xsd:string) "in Uberon, this term is used in the generic sense, not necessarily restricted to the peritoneum, consistent with FMA. WP: 'In anatomy, the mesentery is the double layer of peritoneum that suspends the jejunum and ileum from the posterior wall of the abdomen. Its meaning, however, is frequently extended to include double layers of peritoneum connecting various components of the abdominal cavity.'. TODO - check. Consider FMA:259286 - Region of mesentery.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0011061") AnnotationAssertion( "BTO:0001380") AnnotationAssertion( "EV:0100083") AnnotationAssertion( "FMA:7144") AnnotationAssertion( "GAID:21") AnnotationAssertion( "MESH:A01.047.025.600.451") AnnotationAssertion( "NCIT:C33103") AnnotationAssertion(Annotation( "ncithesaurus:Mesentery") "UMLS:C0025474") AnnotationAssertion( "galen:Mesentery") AnnotationAssertion(Annotation( ) "generic mesentery") AnnotationAssertion(Annotation( ) "mesentery (generic)") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002095") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "mesentery") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/1/19/Gray1038.png"^^xsd:anyURI) SubClassOf( ) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (skin of body) AnnotationAssertion(Annotation( "UBERON:cjm"^^xsd:string) "The organ covering the body that consists of the dermis and epidermis.") AnnotationAssertion( "consider 'integumentary system' for invertebrates") AnnotationAssertion(Annotation( "FMA"^^xsd:string) "MA uses the term skin to refer to what is called here: zone of skin") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0001253") AnnotationAssertion( "CALOHA:TS-0934") AnnotationAssertion( "EFO:0000962") AnnotationAssertion( "EHDAA2:0001844") AnnotationAssertion( "EMAPA:17525") AnnotationAssertion( "FMA:7163") AnnotationAssertion( "MESH:D012867") AnnotationAssertion( "MFMO:0000099") AnnotationAssertion( "NCIT:C12470") AnnotationAssertion( "OpenCyc:Mx4rvVjX3ZwpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Skin") "UMLS:C1123023") AnnotationAssertion( "XAO:0000023") AnnotationAssertion( "galen:Skin") AnnotationAssertion( "entire skin") AnnotationAssertion( "skin organ") AnnotationAssertion( "uberon") AnnotationAssertion( "entire integument") AnnotationAssertion( "integument") AnnotationAssertion( "integumental organ") AnnotationAssertion( "pelt") AnnotationAssertion( "skin") AnnotationAssertion( "UBERON:0002097") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "skin of body") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/6/6d/Skin.svg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "Wikipathways:WP2062") ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (apex of heart) AnnotationAssertion(Annotation( ) "The apex of the heart is the lowest superficial part of the heart. It is directed downward, forward, and to the left, and is overlapped by the left lung and pleura. [WP,unvetted].") AnnotationAssertion(Annotation( "FMA"^^xsd:string) "FMA also has terms for the apical zone") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:7164") AnnotationAssertion( "MA:0000488") AnnotationAssertion( "NCIT:C32126") AnnotationAssertion(Annotation( "ncithesaurus:Apex_of_the_Heart") "UMLS:C0225811") AnnotationAssertion(Annotation( ) "apex cordis") AnnotationAssertion(Annotation( "FMA:7164") "cardiac apex") AnnotationAssertion( "heart apex") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002098") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "apex of heart") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/4/46/Gray492.png"^^xsd:anyURI) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (cardiac septum) AnnotationAssertion(Annotation( "MESH:A07.541.459") "The thin membranous structure between the two heart atria or the thick muscular structure between the two heart ventricles.") AnnotationAssertion( "'Terrestrial vertebrates have divided hearts in which septae separate the oxygenated and deoxygenated blood within the pulmonary and systemic circulations'") AnnotationAssertion(Annotation( "GO") "in GO, septum morphogenesis is part of cardiac chamber morphogenesis; need to add axioms to infer this") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:35400") AnnotationAssertion( "FMA:7180") AnnotationAssertion( "GAID:562") AnnotationAssertion( "MA:0000083") AnnotationAssertion( "MESH:D006346") AnnotationAssertion( "NCIT:C49485") AnnotationAssertion(Annotation( "ncithesaurus:Heart_Septum") "UMLS:C0018819") AnnotationAssertion(Annotation( ) "cardiac septa") AnnotationAssertion(Annotation( ) "heart septa") AnnotationAssertion( "heart septum") AnnotationAssertion( "septum of heart") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "XAO:0004141") Annotation( ) "spiral septa") AnnotationAssertion( "UBERON:0002099") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "cardiac septum") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (trunk) AnnotationAssertion(Annotation( ) Annotation( "TAO:0001115") Annotation( "UBERONREF:0000006") "Organism subdivision which is the part of the body posterior to the cervical region (or head, when cervical region not present) and anterior to the caudal region. Includes the sacrum when present.") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0010339") Annotation( "AAO"^^xsd:string) Annotation( "AAO:BJB"^^xsd:string) "Organism subdivision that is the part of the body posterior to the head and anterior to the tail.[AAO]") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0001115") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "Organism subdivision which is the part of the body posterior to the head and anterior to the tail.[TAO]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010339") AnnotationAssertion( "BILA:0000116") AnnotationAssertion( "BTO:0001493") AnnotationAssertion( "CALOHA:TS-1071") AnnotationAssertion( "EFO:0000966") AnnotationAssertion( "EMAPA:31857") AnnotationAssertion( "FMA:7181") AnnotationAssertion( "MA:0000004") AnnotationAssertion( "MAT:0000296") AnnotationAssertion( "MIAA:0000296") AnnotationAssertion( "NCIT:C33816") AnnotationAssertion( "OpenCyc:Mx4rvVkJjpwpEbGdrcN5Y29ycA") AnnotationAssertion( "TAO:0001115") AnnotationAssertion(Annotation( "ncithesaurus:Trunk") "UMLS:C0460005") AnnotationAssertion( "XAO:0000054") AnnotationAssertion( "XAO:0003025") AnnotationAssertion( "ZFA:0001115") AnnotationAssertion( "galen:Trunk") AnnotationAssertion( "thoracolumbar region") AnnotationAssertion( "torso") AnnotationAssertion(Annotation( "XAO:0000054") "trunk region") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0001493") "Rumpf") AnnotationAssertion( "UBERON:0002100") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "trunk") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses( ) # Class: (limb) AnnotationAssertion(Annotation( "UBERONREF:0000003"^^xsd:string) "A paired appendage that is evolved from a paired fin. The extent of this structure includes autopod, stylopod and zeugopod regions when present, but excludes the girdle and its parts.") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0010336") Annotation( "AAO"^^xsd:string) Annotation( "AAO:BJB"^^xsd:string) "Organism subdivision that has as its parts the jointed appendages used for locomotion and manipulation.[AAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000336") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0198540472 Janvier P, Early vertebrates (1996) p.268"^^xsd:string) "Most anatomists now agree that the three proximal bones of the tetrapod limbs are homologous to the two or three proximal elements of the paired fin skeleton of other sarcopterygians, that is the humerus-femur, radius-tibia, and ulna-fibula.[well established][VHOG]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010336") AnnotationAssertion( "AEO:0000172") AnnotationAssertion( "CALOHA:TS-0552") AnnotationAssertion( "EFO:0000876") AnnotationAssertion( "EHDAA2:0003172") AnnotationAssertion( "EHDAA:1697") AnnotationAssertion( "EHDAA:8273") AnnotationAssertion( "EMAPA:16405") AnnotationAssertion( "FMA:24875") AnnotationAssertion( "GAID:36") AnnotationAssertion( "MA:0000007") AnnotationAssertion( "MAT:0000090") AnnotationAssertion( "MIAA:0000090") AnnotationAssertion( "NCIT:C12429") AnnotationAssertion( "OpenCyc:Mx4rvn1uSZwpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Limb") "UMLS:C0015385") AnnotationAssertion( "VHOG:0000336") AnnotationAssertion( "VSAO:0000121") AnnotationAssertion( "XAO:0003027") AnnotationAssertion( "galen:Extremity") AnnotationAssertion(Annotation( "FMA:24875") "free limb") AnnotationAssertion(Annotation( "MAT:0000090") "limb sensu Vertebrata") AnnotationAssertion( "pentadactyl limb") AnnotationAssertion( "tetrapod limb") AnnotationAssertion(Annotation( ) "flipper") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "extremities") AnnotationAssertion( "extremity") AnnotationAssertion( "UBERON:0002101") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "limb") SubClassOf(Annotation( "Sarcopterygians") ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (forelimb) AnnotationAssertion(Annotation( "UBERONREF:0000003"^^xsd:string) "A (free) limb that is connected to a pectoral girdle. The extent of this structure includes autopod, stylopod and zeugopod regions when present, but excludes the pectoral girdle and its parts.") AnnotationAssertion( "Note distinction between arm and forelimb. hand is part of forelimb, but not part of arm") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0000205") Annotation( "AAO"^^xsd:string) Annotation( "AAO:LAP"^^xsd:string) "Upper limb, which connects the manus with the pectoral girdle.[AAO]") AnnotationAssertion(Annotation( "FMA"^^xsd:string) "note that this corresponds to FMA:'free upper limb' (a limb segment), NOT FMA:'upper limb'. Both MA and FMA consider shoulder (and shoulder bones) part of upper limb") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0000205") AnnotationAssertion( "BTO:0001729") AnnotationAssertion( "CALOHA:TS-2214") AnnotationAssertion( "EFO:0000882") AnnotationAssertion( "EHDAA2:0002133") AnnotationAssertion( "EHDAA:6208") AnnotationAssertion( "EMAPA:17412") AnnotationAssertion( "EV:0100014") AnnotationAssertion( "FMA:24878") AnnotationAssertion( "GAID:1215") AnnotationAssertion( "GAID:51") AnnotationAssertion( "MA:0000025") AnnotationAssertion( "MAT:0000394") AnnotationAssertion( "MESH:D005552") AnnotationAssertion( "MIAA:0000394") AnnotationAssertion( "NCIT:C12671") AnnotationAssertion(Annotation( "ncithesaurus:Upper_Extremity") "UMLS:C1140618") AnnotationAssertion( "VHOG:0000338") AnnotationAssertion( "VSAO:0000148") AnnotationAssertion( "XAO:0003030") AnnotationAssertion( "galen:UpperExtremity") AnnotationAssertion( "anteriormost limb") AnnotationAssertion( "fore limb") AnnotationAssertion( "forelimb") AnnotationAssertion(Annotation( "FMA:24878") "free part of upper limb") AnnotationAssertion(Annotation( "FMA:24878") Annotation( "UBERONREF:0000003"^^xsd:string) "free upper limb") AnnotationAssertion(Annotation( "FMA:7183") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "membrum superius") AnnotationAssertion( "pectoral limb") AnnotationAssertion( "superior member") AnnotationAssertion( "upper extremity") AnnotationAssertion( "upper limb") AnnotationAssertion(Annotation( ) "pectoral flipper") AnnotationAssertion( "uberon") AnnotationAssertion( "foreleg") AnnotationAssertion( "UBERON:0002102") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "forelimb") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (hindlimb) AnnotationAssertion(Annotation( ) Annotation( ) Annotation( "UBERONREF:0000003"^^xsd:string) "A (free) limb that is connected to a pelvic girdle region. The extent of this structure includes autopod, stylopod and zeugopod regions when present, but excludes the pelvic girdle and its parts.") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0000219") Annotation( "AAO"^^xsd:string) Annotation( "AAO:LAP"^^xsd:string) "Lower limb, which connects the pes with the pelvic girdle.[AAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000337") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0198540472 Janvier P, Early vertebrates (1996) p.268"^^xsd:string) "Most anatomists now agree that the three proximal bones of the tetrapod limbs are homologous to the two or three proximal elements of the paired fin skeleton of other sarcopterygians, that is the humerus-femur, radius-tibia, and ulna-fibula.[well established][VHOG]") AnnotationAssertion( "crural") AnnotationAssertion(Annotation( "FMA"^^xsd:string) "note that this corresponds to FMA:'free lower limb' (a limb segment), NOT 'lower limb'. Both MA and FMA consider shoulder (and shoulder bones) part of upper limb. Note that AAO class probably refers to skeleton") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0000219") AnnotationAssertion( "BTO:0002345") AnnotationAssertion( "CALOHA:TS-2215") AnnotationAssertion( "EFO:0000883") AnnotationAssertion( "EHDAA2:0001033") AnnotationAssertion( "EHDAA:6094") AnnotationAssertion( "EMAPA:17458") AnnotationAssertion( "EV:0100015") AnnotationAssertion( "FMA:24879") AnnotationAssertion( "GAID:1221") AnnotationAssertion( "GAID:38") AnnotationAssertion( "MA:0000026") AnnotationAssertion( "MAT:0000395") AnnotationAssertion( "MESH:D006614") AnnotationAssertion( "MIAA:0000395") AnnotationAssertion( "NCIT:C12742") AnnotationAssertion( "NCIT:C77625") AnnotationAssertion(Annotation( "ncithesaurus:Lower_Extremity") "UMLS:C0023216") AnnotationAssertion(Annotation( "ncithesaurus:Hind_Limb") "UMLS:C1522391") AnnotationAssertion( "VHOG:0000337") AnnotationAssertion( "VSAO:0000150") AnnotationAssertion( "XAO:0003031") AnnotationAssertion( "galen:LowerExtremity") AnnotationAssertion(Annotation( "FMA:24879") Annotation( "UBERONREF:0000003"^^xsd:string) "free lower limb") AnnotationAssertion( "hind limb") AnnotationAssertion(Annotation( "VSAO:0000150") "hind-limb") AnnotationAssertion( "hindlimb") AnnotationAssertion( "inferior member") AnnotationAssertion( "lower limb") AnnotationAssertion(Annotation( "FMA:7184") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "membrum inferius") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:24879") "free part of lower limb") AnnotationAssertion( "lower extremity") AnnotationAssertion(Annotation( ) Annotation( ) "membrum inferius") AnnotationAssertion( "pelvic appendage") AnnotationAssertion( "UBERON:0002103") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "hindlimb") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/d/dc/Gray1239.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (visual system) AnnotationAssertion(Annotation( "NIFSTD:FMAID_7191") "The sensory system subserving the sense of vision.") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0000632") Annotation( "AAO"^^xsd:string) Annotation( "AAO:EJS"^^xsd:string) "The sensory system used for sight.[AAO]") AnnotationAssertion( "UBERON:0007036") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0000632") AnnotationAssertion( "BILA:0000140") AnnotationAssertion( "EMAPA:36003") AnnotationAssertion( "FMA:7191") AnnotationAssertion( "MA:0002444") AnnotationAssertion( "NCIT:C12888") AnnotationAssertion( "OpenCyc:Mx4rvViCtpwpEbGdrcN5Y29ycA") AnnotationAssertion( "TAO:0001127") AnnotationAssertion(Annotation( "ncithesaurus:Visual_System") "UMLS:C0587900") AnnotationAssertion( "XAO:0003198") AnnotationAssertion( "ZFA:0001127") AnnotationAssertion(Annotation( "BILA:0000140") "photosensory system") AnnotationAssertion( "visual organ system") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002104") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "visual system") SubClassOf( ) # Class: (vestibulo-auditory system) AnnotationAssertion(Annotation( "ZFA:0001138") "Sensory system responsible for the perception of spatial orientation and auditory stimuli.") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0000631") Annotation( "AAO"^^xsd:string) Annotation( "AAO:EJS"^^xsd:string) "The sensory system used for balance and hearing.[AAO]") AnnotationAssertion( "AAO:0000631") AnnotationAssertion( "EMAPA:36002") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37985") AnnotationAssertion( "FMA:78500") AnnotationAssertion( "TAO:0001138") AnnotationAssertion( "XAO:0003195") AnnotationAssertion( "ZFA:0001138") AnnotationAssertion( "auditory organ system") AnnotationAssertion( "vestibuloauditory system") AnnotationAssertion( "uberon") AnnotationAssertion( "auditory system") AnnotationAssertion( "auditory/vestibular system") AnnotationAssertion( "vestibuloauditory system") AnnotationAssertion( "UBERON:0002105") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "vestibulo-auditory system") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/d/d2/Anatomy_of_the_Human_Ear.svg"^^xsd:anyURI) SubClassOf( ) # Class: (spleen) AnnotationAssertion(Annotation( "ISBN:0-683-40008-8"^^xsd:string) Annotation( "MP:0000689") "The organ that functions to filter blood and to store red corpuscles and platelets.") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0010395") Annotation( "AAO"^^xsd:string) Annotation( "AAO:BMZ") "An organ involved in red blood cell filtration and immune response.[AAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000120") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0781765190 Paul WE, Fundamental Immunology (2008) p.94") "With the advent of clonal selection, the accumulation and segregation of T and B cells in specialized organs for antigen presentation became necessary, and indeed the spleen is found in all jawed vertebrates, but not in agnathans or invertebrates.[well established][VHOG]") AnnotationAssertion( "lienal") AnnotationAssertion( "splenic") AnnotationAssertion( "In humans, it is located in the left upper quadrant of the abdomen. It removes old red blood cells and holds a reserve in case of hemorrhagic shock, especially in animals like horses (not in humans), while recycling iron") AnnotationAssertion(Annotation( ) "Neither hagfish nor lampreys possess what might be considered a discrete and condensed spleen. Hagfish possess dispersed lymphoid tissue within the submucosa of the intestine (96) associated with the portal vein (97), whereas lymphoid tissue is associated with the typhlosole portion of the intestine in lampreys (96)") AnnotationAssertion( "It synthesizes antibodies in its white pulp and removes, from blood and lymph node circulation, antibody-coated bacteria along with antibody-coated blood cells") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010395") AnnotationAssertion( "BTO:0001281") AnnotationAssertion( "CALOHA:TS-0956") AnnotationAssertion( "EFO:0000869") AnnotationAssertion( "EMAPA:18767") AnnotationAssertion( "EV:0100055") AnnotationAssertion( "FMA:7196") AnnotationAssertion( "GAID:1289") AnnotationAssertion( "MA:0000141") AnnotationAssertion( "MAT:0000085") AnnotationAssertion( "MESH:A15.382.520.604.713") AnnotationAssertion( "MIAA:0000085") AnnotationAssertion( "NCIT:C12432") AnnotationAssertion( "OpenCyc:Mx4rvVjgw5wpEbGdrcN5Y29ycA") AnnotationAssertion( "TAO:0000436") AnnotationAssertion(Annotation( "ncithesaurus:Spleen") "UMLS:C0037993") AnnotationAssertion( "VHOG:0000120") AnnotationAssertion( "XAO:0000328") AnnotationAssertion( "ZFA:0000436") AnnotationAssertion( "galen:Spleen") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "lien") AnnotationAssertion( "UBERON:0002106") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "spleen") AnnotationAssertion( "Illu:spleen.jpg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses( ) # Class: (liver) AnnotationAssertion(Annotation( ) Annotation( "BTO:0000759") "An exocrine gland which secretes bile and functions in metabolism of protein and carbohydrate and fat, synthesizes substances involved in the clotting of the blood, synthesizes vitamin A, detoxifies poisonous substances, stores glycogen, and breaks down worn-out erythrocytes[GO].") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0010111") Annotation( "AAO"^^xsd:string) Annotation( "AAO:BJB"^^xsd:string) "Organ which secretes bile and participates in formation of certain blood proteins.[AAO]") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0010111") Annotation( "AAO"^^xsd:string) "relationship type change: differentiates_from endoderm (AAO:0000139) CHANGED TO: develops_from endoderm (UBERON:0000925)[AAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000257") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0072528305 Kardong KV, Vertebrates: Comparative Anatomy, Function, Evolution (2006) p.526, ISBN:978-0030223693 Liem KF, Bemis WE, Walker WF, Grande L, Functional Anatomy of the Vertebrates: An Evolutionary Perspective (2001) p.43") "All vertebrates possess a liver (reference 1); Later in craniate evolution, an anterior gill arch was transformed into jaws, and many new types of feeding subsequently evolved.(...) A liver evolved that, among its many functions, stores considerable energy as glycogen or lipid (reference 2).[well established][VHOG]") AnnotationAssertion( "hepatic") AnnotationAssertion( "An organ sometimes referred to as a liver is found associated with the digestive tract of the primitive chordate Amphioxus. However, this is an enzyme secreting gland, not a metabolic organ, and it is unclear how truly homologous it is to the vertebrate liver. The zebrafish liver differs from the mammalian liver in that the hepatocytes are not clearly organized in cords or lobules and the typical portal triads are not apparent. In addition, the zebrafish liver does not have Kuppfer cells. Furthermore, a clear distinction can be made between the male and female liver in the adult zebrafish. The female hepatocytes are very basophilic (Figure 15c) as a result of the production of vitellogenin (Van der Ven et al. 2003).") AnnotationAssertion( "The liver is found in all vertebrates, and is typically the largest visceral organ. Its form varies considerably in different species, and is largely determined by the shape and arrangement of the surrounding organs. Nonetheless, in most species it is divided into right and left lobes; exceptions to this general rule include snakes, where the shape of the body necessitates a simple cigar-like form. The internal structure of the liver is broadly similar in all vertebrates.") AnnotationAssertion( "secretes bile and functions in metabolism of protein and carbohydrate and fat, synthesizes substances involved in the clotting of the blood, synthesizes vitamin A, detoxifies poisonous substances, stores glycogen, and breaks down worn-out erythrocytes[GO].") AnnotationAssertion(Annotation( "ZFA"^^xsd:string) "Only ZFA considers this part_of immune system - we weaken this to an overlaps relation, as in general it's only a subset of cells that have clear immune function.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010111") AnnotationAssertion( "BTO:0000759") AnnotationAssertion( "CALOHA:TS-0564") AnnotationAssertion( "EFO:0000887") AnnotationAssertion( "EHDAA2:0000997") AnnotationAssertion( "EHDAA:2197") AnnotationAssertion( "EMAPA:16846") AnnotationAssertion( "EV:0100089") AnnotationAssertion( "FMA:7197") AnnotationAssertion( "GAID:288") AnnotationAssertion( "MA:0000358") AnnotationAssertion( "MAT:0000097") AnnotationAssertion( "MESH:D008099") AnnotationAssertion( "MIAA:0000097") AnnotationAssertion( "NCIT:C12392") AnnotationAssertion( "OpenCyc:Mx4rvVimppwpEbGdrcN5Y29ycA") AnnotationAssertion( "TAO:0000123") AnnotationAssertion(Annotation( "ncithesaurus:Liver") "UMLS:C0023884") AnnotationAssertion( "VHOG:0000257") AnnotationAssertion( "XAO:0000133") AnnotationAssertion( "ZFA:0000123") AnnotationAssertion( "galen:Liver") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "iecur") AnnotationAssertion(Annotation( ) Annotation( ) "jecur") AnnotationAssertion( "UBERON:0002107") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "liver") AnnotationAssertion( "Leber:Schaf.jpg"^^xsd:anyURI) SubClassOf(Annotation( "BTO"^^xsd:string) Annotation( "EHDAA2"^^xsd:string) Annotation( "GO-def") ) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "ZFA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "ZFA-weakened") ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (small intestine) AnnotationAssertion(Annotation( ) Annotation( "ISBN:0073040584"^^xsd:string) "Subdivision of digestive tract that connects the stomach to the large intestine and is where much of the digestion and absorption of food takes place (with the exception of ruminants). The mammalian small intestine is long and coiled and can be differentiated histologically into: duodenum, jejunem, ileum[WP,cjm,Kardong].") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0001323") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "The terminal region of the mid intestine is comprised of specialized enterocytes that appear to play a role in mucosal immunity. Wallace et al, 2005.[TAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000055") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0030223693 Liem KF, Bemis WE, Walker WF, Grande L, Functional Anatomy of the Vertebrates: An Evolutionary Perspective (2001) p.566") "Intestinal surface area also is increased in amphibians and reptiles by internal folds and occasionally by a few villi. The intestine can be divided into a small intestine and a slightly wider large intestine.[well established][VHOG]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010397") AnnotationAssertion( "BTO:0000651") AnnotationAssertion( "CALOHA:TS-0942") AnnotationAssertion( "EFO:0000841") AnnotationAssertion( "EMAPA:32834") AnnotationAssertion( "EV:0100072") AnnotationAssertion( "FMA:7200") AnnotationAssertion( "GAID:313") AnnotationAssertion( "MA:0000337") AnnotationAssertion( "MAT:0000047") AnnotationAssertion( "MESH:A03.492.411.620") AnnotationAssertion( "MIAA:0000047") AnnotationAssertion( "NCIT:C12386") AnnotationAssertion( "OpenCyc:Mx4rvVjlIJwpEbGdrcN5Y29ycA") AnnotationAssertion( "TAO:0001323") AnnotationAssertion(Annotation( "ncithesaurus:Small_Intestine") "UMLS:C0021852") AnnotationAssertion( "VHOG:0000055") AnnotationAssertion( "XAO:0000130") AnnotationAssertion( "ZFA:0001323") AnnotationAssertion( "galen:SmallIntestine") AnnotationAssertion( "small bowel") AnnotationAssertion( "small intestine") AnnotationAssertion( "uberon") AnnotationAssertion( "anterior intestine") AnnotationAssertion(Annotation( ) Annotation( ) "intestinum tenue") AnnotationAssertion(Annotation( "BTO:0000651") "intestinum tenue") AnnotationAssertion( "mid intestine") AnnotationAssertion( "UBERON:0002108") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "small intestine") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/8/82/Stomach_colon_rectum_diagram.svg"^^xsd:anyURI) SubClassOf(Annotation( "2") Annotation( "cjm"^^xsd:string) ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pair of nares) AnnotationAssertion(Annotation( ) "Pair of nostrils.") AnnotationAssertion(Annotation( ) ) AnnotationAssertion(Annotation( "FMA"^^xsd:string) "this is a 'set of anatomical planes' in FMA") AnnotationAssertion( ) AnnotationAssertion( "FMA:72005") AnnotationAssertion( "OpenCyc:Mx4rvViCLpwpEbGdrcN5Y29ycA") AnnotationAssertion( "nares set") AnnotationAssertion( "nostrils") AnnotationAssertion( "pair of nostrils") AnnotationAssertion( "uberon") AnnotationAssertion( "nares") AnnotationAssertion(Annotation( "FMA:72005") "set of nares") AnnotationAssertion( "UBERON:0002109") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "pair of nares") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (gall bladder) AnnotationAssertion(Annotation( ) "An organ that aids digestion and stores bile produced by the liver[WP].") AnnotationAssertion(Annotation( "ISBN:9780120749034") ) AnnotationAssertion(Annotation( "GOC:mr") Annotation( "ISBN:9781840761122") ) AnnotationAssertion(Annotation( "GOC:mr") Annotation( "ISBN:9781840761122") ) AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000221") Annotation( "VHOG"^^xsd:string) Annotation( ) "Membranous muscular sac in which the bile from the liver remains stored until it is required. [Dorian_AF, Elsevier's_encyclopaedic_dictionary_of_medicine, Part_B:_Anatomy_(1988)_Amsterdam_etc.:_Elsevier][VHOG]") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0010114") Annotation( "AAO"^^xsd:string) Annotation( "AAO:BJB"^^xsd:string) "Organ attached to the liver which stores bile and empties into the duodenum via the bile duct as needed for digestion.[AAO]") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0010114") Annotation( "AAO"^^xsd:string) "relationship type change: differentiates_from endoderm (AAO:0000139) CHANGED TO: develops_from endoderm (UBERON:0000925)[AAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000221") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "DOI:10.1002/(SICI)1097-0029(19970915)38:6<571::AID-JEMT3>3.0.CO;2-I Oldham-Ott CK, Gilloteaux J, Comparative morphology of the gallbladder and biliary tract in vertebrates: Variation in structure, homology in function and gallstones. Microscopy research and technique (1997)") "The presence of a gallbladder appears to be a primitive trait. It is found in most fish and all adult reptiles and amphibians and has been well conserved in mammals, for the most part.[well established][VHOG]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010114") AnnotationAssertion( "BTO:0000493") AnnotationAssertion( "CALOHA:TS-0394") AnnotationAssertion( "EFO:0000853") AnnotationAssertion( "EHDAA2:0000699") AnnotationAssertion( "EHDAA:8062") AnnotationAssertion( "EMAPA:17202") AnnotationAssertion( "EV:0100090") AnnotationAssertion( "FMA:7202") AnnotationAssertion( "MA:0000356") AnnotationAssertion( "MAT:0000072") AnnotationAssertion( "MESH:D005704") AnnotationAssertion( "MIAA:0000072") AnnotationAssertion( "NCIT:C12377") AnnotationAssertion( "OpenCyc:Mx4rvVkGr5wpEbGdrcN5Y29ycA") AnnotationAssertion( "TAO:0000208") AnnotationAssertion(Annotation( "ncithesaurus:Gallbladder") "UMLS:C0016976") AnnotationAssertion( "VHOG:0000221") AnnotationAssertion( "XAO:0000135") AnnotationAssertion( "ZFA:0000208") AnnotationAssertion( "galen:Gallbladder") AnnotationAssertion( "gall bladder") AnnotationAssertion(Annotation( "FMA:7202") "gallbladder") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "vesica biliaris") AnnotationAssertion(Annotation( ) Annotation( ) "vesica fellea") AnnotationAssertion( "UBERON:0002110") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "Rats do not have a gallbladder, but produce bile. The bile flows directly from the liver through the (hepatic) bile duct into the small intestine (Hebel and Stromberg, 1988)") AnnotationAssertion(rdfs:label "gall bladder") AnnotationAssertion( "Abdomal:organs.svg"^^xsd:anyURI) AnnotationAssertion( "https://upload.wikimedia.org/wikipedia/commons/b/b1/GallbladderAnatomy-en.svg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "BTO"^^xsd:string) ) SubClassOf(Annotation( "MA"^^xsd:string) Annotation( "ZFA"^^xsd:string) Annotation( "cjm"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "definitional"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (artery smooth muscle tissue) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A portion of smooth muscle tissue that is part of an artery [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( "BTO:0000087") AnnotationAssertion( "CALOHA:TS-1198") AnnotationAssertion( "EMAPA:36285") AnnotationAssertion( "FMA:72024") AnnotationAssertion( "MA:0000708") AnnotationAssertion( "NCIT:C49195") AnnotationAssertion(Annotation( "ncithesaurus:Artery_Smooth_Muscle_Tissue") "UMLS:C1706851") AnnotationAssertion(Annotation( "BTO:0000087") "arterial smooth muscle") AnnotationAssertion( "artery smooth muscle") AnnotationAssertion( "artery smooth muscle tissue") AnnotationAssertion(Annotation( "FMA:72024") "smooth muscle of artery") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0000087") "arterial smooth muscle cell") AnnotationAssertion( "UBERON:0002111") AnnotationAssertion(rdfs:label "artery smooth muscle tissue") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (smooth muscle of esophagus) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A portion of smooth muscle tissue that is part of a esophagus [Automatically generated definition].") AnnotationAssertion( "EMAPA:35323") AnnotationAssertion( "FMA:72025") AnnotationAssertion( "MA:0001573") AnnotationAssertion( "esophageal smooth muscle") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "esophagus involuntary muscle") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "esophagus non-striated muscle") AnnotationAssertion( "esophagus smooth muscle") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "esophagus smooth muscle tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "gullet involuntary muscle") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "gullet non-striated muscle") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "gullet smooth muscle") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "gullet smooth muscle tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "involuntary muscle of esophagus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "involuntary muscle of gullet") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "involuntary muscle of oesophagus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "non-striated muscle of esophagus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "non-striated muscle of gullet") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "non-striated muscle of oesophagus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "oesophagus involuntary muscle") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "oesophagus non-striated muscle") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "oesophagus smooth muscle tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "smooth muscle of gullet") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "smooth muscle of oesophagus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "smooth muscle tissue of esophagus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "smooth muscle tissue of gullet") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "smooth muscle tissue of oesophagus") AnnotationAssertion( "uberon") AnnotationAssertion( "oesophagus smooth muscle") AnnotationAssertion( "UBERON:0002112") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "smooth muscle of esophagus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (kidney) AnnotationAssertion(Annotation( ) Annotation( ) "A paired organ of the urinary tract which has the production of urine as its primary function.") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0000250") Annotation( "AAO"^^xsd:string) Annotation( "AAO:BJB"^^xsd:string) "One of either of a pair of structures lying on either side of the dorsal aorta in which fluid balance is regulated and waste is excreted out in the form of urine.[AAO]") AnnotationAssertion( "renal") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0000250") AnnotationAssertion( "BTO:0000671") AnnotationAssertion( "CALOHA:TS-0510") AnnotationAssertion( "EFO:0000929") AnnotationAssertion( "EMAPA:17373") AnnotationAssertion( "EV:0100096") AnnotationAssertion( "FMA:7203") AnnotationAssertion( "GAID:423") AnnotationAssertion( "MA:0000368") AnnotationAssertion( "MAT:0000119") AnnotationAssertion( "MESH:D007668") AnnotationAssertion( "MIAA:0000119") AnnotationAssertion( "NCIT:C12415") AnnotationAssertion( "OpenCyc:Mx4rvVjlYpwpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Kidney") "UMLS:C0022646") AnnotationAssertion( "XAO:0003267") AnnotationAssertion( "galen:Kidney") AnnotationAssertion(Annotation( ) Annotation( ) "reniculate kidney") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002113") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "kidney") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "definitional"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (duodenum) AnnotationAssertion(Annotation( ) Annotation( "ISBN:0815318960") "The first part of the small intestine. At the junction of the stomach and the duodenum the alimentary canal is inflected. The duodenum first goes anteriorly for a short distance, turns dorsally, and eventually caudally, thus it is a U-shaped structure with two horizontal sections (a ventral and a dorsal one).") AnnotationAssertion(Annotation( "ZFA:0000348") ) AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000052") Annotation( "VHOG"^^xsd:string) Annotation( ) "The fixed portion of the small intestine deeply lodged in the posterior wall of the abdomen and extending from the pylorus to the beginning of the jejunum. [Dorian_AF, Elsevier's_encyclopaedic_dictionary_of_medicine, Part_B:_Anatomy_(1988)_Amsterdam_etc.:_Elsevier][VHOG]") AnnotationAssertion( "duodenal") AnnotationAssertion(Annotation( "NCBITaxon:32443") Annotation( ) "In fish, the divisions of the small intestine are not as clear, and the terms anterior intestine or proximal intestine may be used instead of duodenum.") AnnotationAssertion(Annotation( "NCBITaxon:9606") Annotation( ) "In humans, the duodenum is a hollow jointed tube about 10-15 inches (25-38 centimetres) long connecting the stomach to the jejunum. It begins with the duodenal bulb and ends at the ligament of Treitz.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010402") AnnotationAssertion( "BTO:0000365") AnnotationAssertion( "CALOHA:TS-0214") AnnotationAssertion( "EFO:0000851") AnnotationAssertion( "EMAPA:18852") AnnotationAssertion( "EV:0100073") AnnotationAssertion( "FMA:7206") AnnotationAssertion( "GAID:284") AnnotationAssertion( "MA:0000338") AnnotationAssertion( "MAT:0000044") AnnotationAssertion( "MESH:A03.492.411.620.270") AnnotationAssertion( "MIAA:0000044") AnnotationAssertion( "NCIT:C12263") AnnotationAssertion( "OpenCyc:Mx4rv4LJDpwpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Duodenum") "UMLS:C0013303") AnnotationAssertion( "VHOG:0000052") AnnotationAssertion( "XAO:0000236") AnnotationAssertion( "galen:Duodenum") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0000365") "proximal intestine") AnnotationAssertion(Annotation( "BTO:0000365") "upper intestine") AnnotationAssertion( "UBERON:0002114") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "duodenum") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/b/b3/Tractus_intestinalis_duodenum.svg"^^xsd:anyURI) SubClassOf(Annotation( "3") Annotation( "cjm"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (jejunum) AnnotationAssertion(Annotation( "MGI:monikat") Annotation( "MP:0004002") "The portion of the small intestine that extends from the duodenum to the ileum.") AnnotationAssertion( "TODO consider ZFA:0001323 mid intestine, see also small intestine") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000053") Annotation( "VHOG"^^xsd:string) Annotation( ) "The first two fifth of the small intestine beyond the duodenum. It extends from the end of the duodenum to the ileum. [Dorian_AF, Elsevier's_encyclopaedic_dictionary_of_medicine, Part_B:_Anatomy_(1988)_Amsterdam_etc.:_Elsevier][VHOG]") AnnotationAssertion( "jejunal") AnnotationAssertion( "The jejunum is the middle section of the small intestine in most higher vertebrates, including mammals, reptiles, and birds. In fish, the divisions of the small intestine are not as clear and the terms middle intestine or mid-gut may be used instead of jejunum.[Wikipedia:Jejunum]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0000657") AnnotationAssertion( "CALOHA:TS-0496") AnnotationAssertion( "EFO:0001333") AnnotationAssertion( "EMAPA:18666") AnnotationAssertion( "EV:0100074") AnnotationAssertion( "FMA:7207") AnnotationAssertion( "GAID:318") AnnotationAssertion( "MA:0000340") AnnotationAssertion( "MAT:0000045") AnnotationAssertion( "MESH:A03.492.411.620.625") AnnotationAssertion( "MIAA:0000045") AnnotationAssertion( "NCIT:C12388") AnnotationAssertion( "OpenCyc:Mx4rwATkPJwpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Jejunum") "UMLS:C0022378") AnnotationAssertion( "VHOG:0000053") AnnotationAssertion( "galen:Jejunum") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0000657") "intestinum jejunum") AnnotationAssertion(Annotation( ) "mid-intestine") AnnotationAssertion(Annotation( "BTO:0000657") "middle intestine") AnnotationAssertion( "UBERON:0002115") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "jejunum") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/3/3d/Illu_small_intestine.jpg"^^xsd:anyURI) SubClassOf(Annotation( "3") Annotation( "cjm"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "Wikipedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (ileum) AnnotationAssertion(Annotation( "ISBN:0-683-40008-8"^^xsd:string) Annotation( "MGI:csmith"^^xsd:string) Annotation( "MP:0002581") "The portion of the small intestine that extends from the jejunum to the colon.") AnnotationAssertion( "TODO consider ZFA:0000706 posterior intestine, see also colon") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000647") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0521617147 Stevens CE and Hume ID, Comparative physiology of the vertebrate digestive system (2004) p.11") "Although all vertebrates have a digestive tract and accessory glands, various parts of this system are not necessarily homologous, analogous, or even present in all species. Therefore, broad comparisons can be best made under the listings of headgut, foregut, midgut, pancreas and biliary system, hindgut.[uncertain][VHOG]") AnnotationAssertion( "ileal") AnnotationAssertion( "The ileum is the final section of the small intestine in most higher vertebrates, including mammals, reptiles, and birds. In fish, the divisions of the small intestine are not as clear and the terms posterior intestine or distal intestine may be used instead of ileum.[Wikipedia:Ileum]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010403") AnnotationAssertion( "BTO:0000620") AnnotationAssertion( "CALOHA:TS-0472") AnnotationAssertion( "EFO:0001334") AnnotationAssertion( "EMAPA:32764") AnnotationAssertion( "EV:0100075") AnnotationAssertion( "FMA:7208") AnnotationAssertion( "GAID:315") AnnotationAssertion( "MA:0000339") AnnotationAssertion( "MAT:0000282") AnnotationAssertion( "MESH:A03.492.411.620.484") AnnotationAssertion( "MIAA:0000282") AnnotationAssertion( "NCIT:C12387") AnnotationAssertion( "OpenCyc:Mx4rvdcLHZwpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Ileum") "UMLS:C0020885") AnnotationAssertion( "VHOG:0000647") AnnotationAssertion( "XAO:0000237") AnnotationAssertion( "galen:Ileum") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0000620") "distal intestine") AnnotationAssertion(Annotation( "BTO:0000620") "intestinum ileum") AnnotationAssertion(Annotation( "BTO:0000620") "lower intestine") AnnotationAssertion(Annotation( ) "posterior intestine") AnnotationAssertion( "UBERON:0002116") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "ileum") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/3/3d/Illu_small_intestine.jpg"^^xsd:anyURI) SubClassOf(Annotation( "3") Annotation( "cjm"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (right ovary) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An ovary that is part of a right side of organism [Automatically generated definition].") AnnotationAssertion( "https://github.com/obophenotype/uberon/wiki/Modeling-paired-structures-Design-Pattern"^^xsd:anyURI) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37367") AnnotationAssertion( "FMA:7213") AnnotationAssertion( "MA:0001705") AnnotationAssertion( "NCIT:C33487") AnnotationAssertion(Annotation( "ncithesaurus:Right_Ovary") "UMLS:C0227873") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002118") AnnotationAssertion(rdfs:label "right ovary") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (left ovary) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An ovary that is part of a left side of organism [Automatically generated definition].") AnnotationAssertion( "https://github.com/obophenotype/uberon/wiki/Modeling-paired-structures-Design-Pattern"^^xsd:anyURI) AnnotationAssertion(Annotation( ) "In some elasmobranchs, the left ovary does not mature, with only the right ovary fully developing. In the primitive jawless fish, and some teleosts, there is only one ovary, formed by the fusion of the paired organs in the embryo") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37366") AnnotationAssertion( "FMA:7214") AnnotationAssertion( "MA:0001704") AnnotationAssertion( "NCIT:C32969") AnnotationAssertion(Annotation( "ncithesaurus:Left_Ovary") "UMLS:C0227874") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002119") AnnotationAssertion(rdfs:label "left ovary") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pronephros) AnnotationAssertion(Annotation( ) Annotation( "GO:0048793") "In mammals, the pronephros is the first of the three embryonic kidneys to be established and exists only transiently. In lower vertebrates such as fish and amphibia, the pronephros is the fully functional embryonic kidney and is indispensible for larval life[GO].") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000037") Annotation( "VHOG"^^xsd:string) Annotation( ) "A kidney formed of nephric tubules arising in the anterior region of the nephric ridge; forms only as a transient embryonic structure. [Evolution, Fourth_Edition_(2006)_McGraw-Hill, Function, Kardong_KV, Vertebrates:_Comparative_Anatomy, p.748][VHOG]") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0011089") Annotation( "AAO"^^xsd:string) Annotation( "XAO:curator") "Organ that serves as a transient kidney, providing osmoregulation during early developmental stages and then degenerating during metamorphosis.[AAO]") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0000151") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "The embryonic kidney, present at the level of the third somite, is composed of two glomeruli fused at the midline, two pronephric tubules, and paired bilateral pronephric ducts that modify the composition of the blood filtrate before delivering it to the cloaca for excretion.Kimmel et al, 1995.[TAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000037") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0030223693 Liem KF, Bemis WE, Walker WF, Grande L, Functional Anatomy of the Vertebrates: An Evolutionary Perspective (2001) p.637") "In all vertebrate embryos, the kidney begins with the differentiation of a few renal tubules from the anterior end of the nephric ridge overlying the pericardial cavity. (...) This early-developing embryonic kidney is called the pronephros.[well established][VHOG]") AnnotationAssertion( "pronephric") AnnotationAssertion( "UBERON:0005794") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0011089") AnnotationAssertion( "BTO:0001541") AnnotationAssertion( "EFO:0000927") AnnotationAssertion( "EHDAA2:0001570") AnnotationAssertion( "EHDAA:1017") AnnotationAssertion( "EMAPA:16579") AnnotationAssertion( "FMA:72170") AnnotationAssertion( "MAT:0000117") AnnotationAssertion( "MIAA:0000117") AnnotationAssertion( "NCIT:C34280") AnnotationAssertion( "TAO:0000151") AnnotationAssertion(Annotation( "ncithesaurus:Pronephros") "UMLS:C0231048") AnnotationAssertion( "VHOG:0000037") AnnotationAssertion( "XAO:0002000") AnnotationAssertion( "ZFA:0000151") AnnotationAssertion(Annotation( "XAO:0002000") "pronephric kidney") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0001541") "archinephron") AnnotationAssertion(Annotation( "BTO:0001541") "embryonic kidney") AnnotationAssertion(Annotation( "BTO:0001541") "pronephron") AnnotationAssertion( "UBERON:0002120") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "Once the more complex mesonephros forms the pronephros undergoes apoptosis in amphibians. In fishes the nephron degenerates but the organ remains and becomes a component of the immune system[Wikipedia:Pronephros]. // TODO - check developmental relationships. Note that we previously include the ZFA/XAO terms under the more specific 'pronephric kidney', but these are now merged. TODO GCI: relationship: capable_of GO:0030104") AnnotationAssertion(rdfs:label "pronephros") SubClassOf(Annotation( "GO"^^xsd:string) ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "OG") ObjectSomeValuesFrom( )) SubClassOf(Annotation( "ZFA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (capsule of thymus) AnnotationAssertion(Annotation( "MP:0002368") "The fibrous connective tissue surrounding the thymus.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:19306") AnnotationAssertion( "FMA:72204") AnnotationAssertion( "MA:0000766") AnnotationAssertion( "NCIT:C33770") AnnotationAssertion(Annotation( "ncithesaurus:Thymic_Capsule") "UMLS:C0229945") AnnotationAssertion( "thymic capsule") AnnotationAssertion( "thymus capsule") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002122") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "capsule of thymus") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (cortex of thymus) AnnotationAssertion(Annotation( "ISBN:0-683-40008-8"^^xsd:string) Annotation( "MP:0002371") "The outer part of a thymus lobule that surrounds the medulla and is composed of closely packed lymphocytes.") AnnotationAssertion(Annotation( ) ) AnnotationAssertion( "Histologically, the thymus can be divided into a central medulla and a peripheral cortex which is surrounded by an outer capsule. The cortex and medulla play different roles in the development of T cells. Cells in the thymus can be divided into thymic stromal cells and cells of hematopoietic origin[WP]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0002934") AnnotationAssertion( "EMAPA:35863") AnnotationAssertion( "FMA:72205") AnnotationAssertion( "MA:0000767") AnnotationAssertion( "NCIT:C33774") AnnotationAssertion(Annotation( "ncithesaurus:Thymus_Cortex") "UMLS:C0229948") AnnotationAssertion(Annotation( "BTO:0002934") "thymic cortex") AnnotationAssertion(Annotation( "MA:0000767") "thymus cortex") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002123") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "cortex of thymus") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (medulla of thymus) AnnotationAssertion(Annotation( ) "Medullary portion of thymus. The reticulum is coarser than in the cortex, the lymphoid cells are relatively fewer in number, and there are found peculiar nest-like bodies, the concentric corpuscles of Hassall. These concentric corpuscles are composed of a central mass, consisting of one or more granular cells, and of a capsule formed of epithelioid cells. They are the remains of the epithelial tubes, which grow out from the third branchial pouches of the embryo to form the thymus. Each follicle is surrounded by a vascular plexus, from which vessels pass into the interior, and radiate from the periphery toward the center, forming a second zone just within the margin of the medullary portion. In the center of the medullary portion there are very few vessels, and they are of minute size.") AnnotationAssertion(Annotation( ) ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0004560") AnnotationAssertion( "EFO:0001969") AnnotationAssertion( "EMAPA:19305") AnnotationAssertion( "FMA:72206") AnnotationAssertion( "MA:0000771") AnnotationAssertion( "NCIT:C33775") AnnotationAssertion(Annotation( "ncithesaurus:Thymus_Medulla") "UMLS:C0229949") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "medulla of thymus gland") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "thymus gland medulla") AnnotationAssertion( "thymus medulla") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002124") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "medulla of thymus") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (thymus lobule) AnnotationAssertion(Annotation( ) Annotation( "ncithesaurus:Thymic_Lobule") "A lobule that is part of a thymus. Divided into an outer cortex and inner medulla and separated from each other by connective tissue septa, but with the medullary tissue continuous from lobule to lobule.[ncit,modified].") AnnotationAssertion( "in the mouse, the lobes of the thymus are not subdivided into lobules but only in the central medulla and a peripheral cortex (i.e. there is no distinct sublobulation). In humans, the two thymus lobes are composed of many lobules of various sizes which contain follicles, each comprising a medulla and a cortex. in the rat, the thymus is partially subdivided into lobules separated by thin bands of connective tissue which are continuous with the thin connective tissue capsule.[MP]") AnnotationAssertion( "Lymphocytes, reticular cells and macrophages are found in the lobules") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:72215") AnnotationAssertion( "MA:0000770") AnnotationAssertion( "NCIT:C33772") AnnotationAssertion(Annotation( "ncithesaurus:Thymic_Lobule") "UMLS:C1522462") AnnotationAssertion(Annotation( "FMA:72215") "lobule of thymus") AnnotationAssertion( "thymic lobule") AnnotationAssertion(Annotation( "MA:0000770") "thymus lobule") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002125") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "thymus lobule") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (solitary tract nuclear complex) AnnotationAssertion(Annotation( ) "The solitary tract and nucleus are structures in the brainstem that carry and receive visceral sensation and taste from the facial (VII), glossopharyngeal (IX) and vagus (X) cranial nerves. [WP,unvetted].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:72242") AnnotationAssertion( "nuclei of solitary tract") AnnotationAssertion(Annotation( "FMA:72242") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "nucleus tractus solitarii") AnnotationAssertion( "solitary nuclei") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002126") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "solitary tract nuclear complex") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "MA-abduced") ObjectSomeValuesFrom( )) # Class: (inferior olivary complex) AnnotationAssertion(Annotation( ) "Largest nucleus situated in the olivary body, part of the medulla oblongata. It is closely associated with the cerebellum, but its specific function is voluntary body movements.") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001627") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0471210054 Butler AB and Hodos W, Comparative vertebrate neuroanatomy: Evolution and Adaptation (2005) p.256") "The inferior olive appears to be present in all vertebrate classes and is particularly well developed in species with a well-developed cerebellum.[well established][VHOG]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:IO") AnnotationAssertion( "BAMS:ifol") AnnotationAssertion( "BIRNLEX:1164") AnnotationAssertion( "BM:Me-IO") AnnotationAssertion( "BTO:0002298") AnnotationAssertion( "DHBA:12600") AnnotationAssertion( "EMAPA:19241") AnnotationAssertion( "EV:0100277") AnnotationAssertion( "FMA:72243") AnnotationAssertion( "HBA:9560") AnnotationAssertion( "MA:0001040") AnnotationAssertion( "MBA:83") AnnotationAssertion( "TAO:0000215") AnnotationAssertion(Annotation( "BIRNLEX:1164") "UMLS:C0228540") AnnotationAssertion( "VHOG:0001627") AnnotationAssertion( "ZFA:0000215") AnnotationAssertion(Annotation( "BIRNLEX:1164") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=748") AnnotationAssertion(Annotation( "FMA:72243") "inferior olivary nuclear complex") AnnotationAssertion(Annotation( "FMA:72243") "inferior olive") AnnotationAssertion(Annotation( "FMA:72243") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "oliva") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0002298") "caudal olivary nuclei") AnnotationAssertion(Annotation( "BTO:0002298") "complexus olivaris inferior") AnnotationAssertion(Annotation( ) Annotation( ) "complexus olivaris inferior; nuclei olivares inferiores") AnnotationAssertion(Annotation( "NeuroNames:748") "inferior olivary complex (Vieussens)") AnnotationAssertion(Annotation( "BTO:0002298") "inferior olivary nuclei") AnnotationAssertion(Annotation( "FMA:72243") "inferior olivary nucleus") AnnotationAssertion(Annotation( "BTO:0002298") "nuclei olivares caudales") AnnotationAssertion(Annotation( "BTO:0002298") "nuclei olivares inferiores") AnnotationAssertion(Annotation( "NeuroNames:748") Annotation( ) "nucleus olivaris caudalis") AnnotationAssertion(Annotation( "NeuroNames:748") Annotation( ) "nucleus olivaris inferior") AnnotationAssertion(Annotation( "NeuroNames:748") Annotation( ) "regio olivaris inferior") AnnotationAssertion( "UBERON:0002127") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "inferior olivary complex") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/7/72/CerebCircuit.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (superior olivary complex) AnnotationAssertion(Annotation( ) Annotation( "ISBN:0-19-502694-2") "A collection of brainstem nuclei that functions in multiple aspects of hearing and is an important component of the ascending and descending auditory pathways of the auditory system.") AnnotationAssertion( "In mice, the superior olivary nucleus is a small cylindrical mass on the dorsal surface of the lateral part of the trapezoid body of the pons, and it is situated immediately above the inferior olivary nucleus. It receives projections from the cochlear nucleus and thus is involved in the perception of sound[GO:0021718]") AnnotationAssertion( "The SOC displays a significant interspecies variation, being largest in bats and rodents and smaller in primates.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:SOC") AnnotationAssertion( "BIRNLEX:1307") AnnotationAssertion( "DHBA:12462") AnnotationAssertion( "EMAPA:35840") AnnotationAssertion( "EV:0100263") AnnotationAssertion( "FMA:72247") AnnotationAssertion( "HBA:9177") AnnotationAssertion( "MA:0001026") AnnotationAssertion( "MBA:398") AnnotationAssertion(Annotation( "BIRNLEX:1307") "UMLS:C0175427") AnnotationAssertion( "VHOG:0001381") AnnotationAssertion(Annotation( "BIRNLEX:1307") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=569") AnnotationAssertion(Annotation( "FMA:72247") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "nucleus olivaris superior") AnnotationAssertion(Annotation( "FMA:72247") "superior olivary nuclei") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:569") Annotation( ) "regio olivaris superioris") AnnotationAssertion(Annotation( "FMA:72247") Annotation( ) "superior olivary nucleus") AnnotationAssertion(Annotation( "NeuroNames:569") "superior olivary nucleus (Barr & Kiernan)") AnnotationAssertion(Annotation( "FMA:72247") Annotation( "ISBN:0-19-502694-2") Annotation( ) "superior olive") AnnotationAssertion( "UBERON:0002128") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "superior olivary complex") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/4/46/Gray713.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "NIFSTD"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (cerebellar cortex) AnnotationAssertion(Annotation( "BIRNLEX:1566") "The superficial gray matter of the cerebellum. It consists of three main layers, the molecular layer, the Purkinje cell layer and the granule cell layer.") AnnotationAssertion(Annotation( "GO:0021695") "The cerebellar cortex is a thin mantle of gray matter that covers the surface of each cerebral hemisphere. It has a characteristic morphology with convolutions (gyri) and crevices (sulci) that have specific functions. Six layers of nerve cells and the nerve pathways that connect them comprise the cerebellar cortex. Together, these regions are responsible for the processes of conscious thought, perception, emotion and memory as well as advanced motor function[GO][GO:0021695].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:CB") AnnotationAssertion( "BAMS:CBX") AnnotationAssertion( "BAMS:CbCx") AnnotationAssertion( "BIRNLEX:1566") AnnotationAssertion( "BM:CB-Cbx") AnnotationAssertion( "BTO:0000043") AnnotationAssertion( "CALOHA:TS-2000") AnnotationAssertion( "DHBA:10657") AnnotationAssertion( "DMBA:16939") AnnotationAssertion( "EMAPA:35211") AnnotationAssertion( "EV:0100294") AnnotationAssertion( "FMA:72248") AnnotationAssertion( "GAID:596") AnnotationAssertion( "HBA:4697") AnnotationAssertion( "MA:0000199") AnnotationAssertion( "MBA:528") AnnotationAssertion( "MESH:D002525") AnnotationAssertion( "NCIT:C49216") AnnotationAssertion(Annotation( "BIRNLEX:1566") "UMLS:C0007759") AnnotationAssertion(Annotation( "ncithesaurus:Cerebellar_Cortex") "UMLS:C0007759") AnnotationAssertion(Annotation( "BIRNLEX:1566") "UMLS:C1284087") AnnotationAssertion( "VHOG:0001597") AnnotationAssertion(Annotation( "BIRNLEX:1566") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=647") AnnotationAssertion(Annotation( "DMBA:CbHCx") "cortex of cerebellar hemisphere") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0000043") "cortex cerebellaris") AnnotationAssertion(Annotation( "NeuroNames:647") Annotation( ) "cortex cerebelli") AnnotationAssertion( "UBERON:0002129") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "The circuits in the cerebellar cortex look similar across all classes of vertebrates, including fish, reptiles, birds, and mammals (e.g., Fig. 2). This has been taken as evidence that the cerebellum performs functions important to all vertebrate species. (Wikipedia)") AnnotationAssertion(rdfs:label "cerebellar cortex") AnnotationAssertion( "Cerebellum:NIH.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (cerebellar nuclear complex) AnnotationAssertion(Annotation( ) Annotation( "MP:0009979") "The gray matter nuclei located in the center of the cerebellum, embedded in the white matter, which receive inhibitory (GABAergic) inputs from Purkinje cells in the cerebellar cortex and excitatory (glutamatergic) inputs from mossy fiber pathways; all output fibers of the cerebellum originate from the these nuclei[MP].") AnnotationAssertion(Annotation( "michaelerice") Annotation( ) Annotation( ) ) AnnotationAssertion( "UBERON:0004007") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:CBN") AnnotationAssertion( "BAMS:CBn") AnnotationAssertion( "BAMS:DCb") AnnotationAssertion( "BAMS:DNC") AnnotationAssertion( "BIRNLEX:1568") AnnotationAssertion( "DHBA:10660") AnnotationAssertion( "EV:0100299") AnnotationAssertion( "FMA:72249") AnnotationAssertion( "GAID:599") AnnotationAssertion( "HBA:4780") AnnotationAssertion( "MBA:519") AnnotationAssertion( "MESH:D002529") AnnotationAssertion(Annotation( "BIRNLEX:1568") "UMLS:C0007763") AnnotationAssertion(Annotation( "BIRNLEX:1568") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=682") AnnotationAssertion( "central nuclei") AnnotationAssertion( "cerebellar nuclei") AnnotationAssertion(Annotation( "BIRNLEX:1568") "deep cerebellar nuclear complex") AnnotationAssertion( "deep cerebellar nuclei") AnnotationAssertion( "intracerebellar nuclei") AnnotationAssertion( "intrinsic nuclei of cerebellum") AnnotationAssertion(Annotation( "FMA:72249") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "nuclei cerebelli") AnnotationAssertion( "roof nuclei-2") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:682") Annotation( ) "nuclei cerebellares") AnnotationAssertion(Annotation( "NeuroNames:682") Annotation( ) "nuclei cerebellaris") AnnotationAssertion(Annotation( ) Annotation( ) "nuclei cerebelli") AnnotationAssertion( "UBERON:0002130") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "cerebellar nuclear complex") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/2/23/Gray707.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (anterior lobe of cerebellum) AnnotationAssertion(Annotation( "ISBN:0838580343") Annotation( "MP:0009960") "The region of the cerebellum that is anterior to the primary fissure.") AnnotationAssertion( "responsible for mediating unconscious proprioception.[Wikipedia:Anterior_lobe_of_cerebellum]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:ALCb") AnnotationAssertion( "BAMS:ANT") AnnotationAssertion( "BAMS:Ant") AnnotationAssertion( "BIRNLEX:1118") AnnotationAssertion( "BTO:0000496") AnnotationAssertion( "DHBA:12838") AnnotationAssertion( "EMAPA:35215") AnnotationAssertion( "EV:0100295") AnnotationAssertion( "FMA:72251") AnnotationAssertion( "MA:0000991") AnnotationAssertion( "VHOG:0001598") AnnotationAssertion( "anterior cerebellar lobe") AnnotationAssertion( "anterior lobe of cerebellum") AnnotationAssertion(Annotation( "BIRNLEX:1118") "anterior lobe of the cerebellum") AnnotationAssertion( "cerebellar anterior lobe") AnnotationAssertion( "cerebellum anterior lobe") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "palaeocerebellum") AnnotationAssertion( "UBERON:0002131") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "anterior lobe of cerebellum") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/1/13/CerebellumRegions.jpg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses(Annotation( "lexical"^^xsd:string) ) # Class: (dentate nucleus) AnnotationAssertion(Annotation( "ISBN:0-683-40008-8"^^xsd:string) Annotation( "MP:0009980") "The largest and most lateral of the deep cerebellum nuclei; it receives axons of Purkinje cells in the lateral cerebellar hemisphere (neocerebellum) and receives its afferents from the premotor cortex and the supplementary motor cortex through the pontocerebellar system, and its efferents project through the superior cerebellar peduncle and is a major source of its fibers.") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001700") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0471210054 Butler AB, Hodos W, Comparative vertebrate neuroanatomy: Evolution and Adaptation (2005) p.260-261") "One or more deep cerebellar nuclei appear in agnathans, sharks, ropefishes, lungfishes, Latimeria, and amphibians. Reptiles have two nuclei (a medial and a lateral), and birds and mammals have three nuclei (a medial, a lateral, and an interposed nucleus). The medial nucleus of mammals is known as the fastigial nucleus, and the lateral nucleus is known as the dentate nucleus.[well established][VHOG]") AnnotationAssertion( "UBERON:0008996") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:DN") AnnotationAssertion( "BAMS:Dt") AnnotationAssertion( "BIRNLEX:1171") AnnotationAssertion( "BM:CB-CBL") AnnotationAssertion( "BTO:0003836") AnnotationAssertion( "EV:0100300") AnnotationAssertion( "FMA:72260") AnnotationAssertion( "HBA:12946") AnnotationAssertion( "MA:0001008") AnnotationAssertion( "MBA:846") AnnotationAssertion(Annotation( "BIRNLEX:1171") "UMLS:C0086120") AnnotationAssertion( "VHOG:0001700") AnnotationAssertion(Annotation( "BIRNLEX:1171") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=683") AnnotationAssertion(Annotation( "BIRNLEX:1171") "dentate cerebellar nucleus") AnnotationAssertion( "lateral cerebellar nucleus") AnnotationAssertion( "lateral nucleus of cerebellum") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "dentate nucleus") AnnotationAssertion(Annotation( "NeuroNames:683") "dentate nucleus (Vicq d'Azyr)") AnnotationAssertion(Annotation( ) "dentatothalamocortical fibers") AnnotationAssertion(Annotation( ) "nucleus dentatus") AnnotationAssertion(Annotation( ) Annotation( ) "nucleus dentatus") AnnotationAssertion(Annotation( "NeuroNames:683") Annotation( ) "nucleus dentatus cerebelli") AnnotationAssertion(Annotation( "NeuroNames:683") Annotation( ) "nucleus lateralis cerebelli") AnnotationAssertion( "UBERON:0002132") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "dentate nucleus") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/2/23/Gray707.png"^^xsd:anyURI) SubClassOf( ) DisjointClasses(Annotation( "lexical"^^xsd:string) ) # Class: (atrioventricular valve) AnnotationAssertion(Annotation( ) Annotation( ) "A cardial valve in the atrioventricular region that separates the atrium from the ventricle and prevent backflow from the ventricles into the atria during systole.") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0005064") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "The atrioventricular valve has four distinct leaflets oriented anterior, posterior, left, and right of the atrioventricular orifice. Hu et al. 2001.[TAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001472") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( ) "Valve in the heart through which blood flows from the atria to the ventricles. [TFD][VHOG]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001472") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( ) "The conus arteriosus is the most distal part of the primitive fish heart and forms the connection between the ventricle and the ventral aorta. At the sinoatrial, the atrioventricular, and the ventriculoconal junctions, valves developed to prevent backflow of blood during relaxation of the preceding compartment.[uncertain][VHOG]") AnnotationAssertion(Annotation( "ZFA"^^xsd:string) "in ZFA this is part of both atrium and ventricle, but we use a connecting relationship here; see also notes for left and right.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0000153") AnnotationAssertion( "EHDAA:7421") AnnotationAssertion( "EMAPA:35154") AnnotationAssertion( "FMA:7233") AnnotationAssertion( "MA:0002789") AnnotationAssertion( "OpenCyc:Mx4rfCfdorrpEduAAAACs6hRXg") AnnotationAssertion( "TAO:0005064") AnnotationAssertion( "VHOG:0001472") AnnotationAssertion( "ZFA:0005064") AnnotationAssertion( "galen:AtrioventricularValve") AnnotationAssertion( "AV valve") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "EMAPA:35154") "atrio-ventricular valve") AnnotationAssertion( "UBERON:0002133") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "atrioventricular valve") SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (tricuspid valve) AnnotationAssertion(Annotation( ) "An atrioventricular valve that is part of the outflow part of the right atrium.") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000816") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( ) "The three-segmented valve of the heart that keeps blood in the right ventricle from flowing back into the right atrium. [TFD][VHOG]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000816") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "DOI:10.1161/CIRCRESAHA.109.201566 Combs MD, Yutzey KE, Heart valve development. Circulatory Research (2009)") "The mature AV (atrioventricular) valve of the adult zebrafish 2-chambered heart is structurally similar to the mammalian AV valves with stratified ECM (extracellular matrix) and supporting chordae tendineae. Therefore, the major cellular and molecular events of valve development are largely conserved among animals with hearts composed of multiple chambers.[well established][VHOG]") AnnotationAssertion(Annotation( "FMA"^^xsd:string) "FMA part_ofs changed to connects") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0004029") AnnotationAssertion( "EHDAA:7427") AnnotationAssertion( "EMAPA:17873") AnnotationAssertion( "FMA:7234") AnnotationAssertion( "GAID:567") AnnotationAssertion( "MA:0000090") AnnotationAssertion( "MESH:D014261") AnnotationAssertion( "NCIT:C12805") AnnotationAssertion( "OpenCyc:Mx4rvuWAAJwpEbGdrcN5Y29ycA") AnnotationAssertion( "RETIRED_EHDAA2:0002081") AnnotationAssertion(Annotation( "ncithesaurus:Tricuspid_Valve") "UMLS:C0040960") AnnotationAssertion( "VHOG:0000816") AnnotationAssertion( "galen:TricuspidValve") AnnotationAssertion(Annotation( "FMA:7234") "right atrioventricular valve") AnnotationAssertion(Annotation( "FMA:7234") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "valva atrioventricularis dextra") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "valvula tricuspidalis") AnnotationAssertion( "UBERON:0002134") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "tricuspid valve") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/2/20/Diagram_of_the_human_heart_%28cropped%29.svg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (mitral valve) AnnotationAssertion(Annotation( ) "An atrioventricular valve that is part of the outflow part of the left atrium.") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000817") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( ) "A valve of the heart, composed of two triangular flaps, that is located between the left atrium and left ventricle and regulates blood flow between these chambers. [TFD][VHOG]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000817") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "DOI:10.1161/CIRCRESAHA.109.201566 Combs MD, Yutzey KE, Heart valve development. Circulatory Research (2009)") "The mature AV (atrioventricular) valve of the adult zebrafish 2-chambered heart is structurally similar to the mammalian AV valves with stratified ECM (extracellular matrix) and supporting chordae tendineae. Therefore, the major cellular and molecular events of valve development are largely conserved among animals with hearts composed of multiple chambers.[well established][VHOG]") AnnotationAssertion(Annotation( "FMA"^^xsd:string) "FMA part_ofs changed to connects") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EFO:0003933") AnnotationAssertion( "EHDAA2:0000168") AnnotationAssertion( "EMAPA:17871") AnnotationAssertion( "FMA:7235") AnnotationAssertion( "GAID:565") AnnotationAssertion( "MA:0000088") AnnotationAssertion( "MESH:D008943") AnnotationAssertion( "NCIT:C12753") AnnotationAssertion( "OpenCyc:Mx4rv4l2nJwpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Mitral_Valve") "UMLS:C0026264") AnnotationAssertion( "VHOG:0000817") AnnotationAssertion( "galen:MitralValve") AnnotationAssertion( "left atrioventricular valve") AnnotationAssertion(Annotation( "FMA:7235") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "valva atrioventricularis sinistra") AnnotationAssertion( "uberon") AnnotationAssertion( "bicuspid valve") AnnotationAssertion(Annotation( ) Annotation( ) "valva mitralis") AnnotationAssertion( "UBERON:0002135") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "mitral valve") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/2/20/Diagram_of_the_human_heart_%28cropped%29.svg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) DisjointClasses( ) # Class: (hilus of dentate gyrus) AnnotationAssertion(Annotation( "BIRNLEX:1482") "Layer of the dentate gyrus lying deep to the granule cell layer, within the opening of the C or V formed by the granule cell layer characterized by loosely packed polymorphic cells.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:Hil") AnnotationAssertion( "BAMS:hdg") AnnotationAssertion( "BIRNLEX:1482") AnnotationAssertion( "EMAPA:35277") AnnotationAssertion( "FMA:72358") AnnotationAssertion( "MA:0000947") AnnotationAssertion(Annotation( "BIRNLEX:1482") "UMLS:C1134421") AnnotationAssertion(Annotation( "BIRNLEX:1482") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=181") AnnotationAssertion( "dentate gyrus hilus") AnnotationAssertion( "field CA4 of hippocampal formation") AnnotationAssertion( "uberon") AnnotationAssertion( "CA4") AnnotationAssertion(Annotation( "NeuroNames:181") Annotation( ) "hilus gyri dentati") AnnotationAssertion(Annotation( "NeuroNames:181") "hilus of the dentate gyrus") AnnotationAssertion(Annotation( "FMA:72358") "multiform layer of dentate gyrus") AnnotationAssertion(Annotation( "FMA:72358") "polymorphic later of dentate gyrus") AnnotationAssertion(Annotation( "NeuroNames:181") "region CA4") AnnotationAssertion( "UBERON:0002136") AnnotationAssertion(rdfs:comment "Merge with CA4?") AnnotationAssertion(rdfs:label "hilus of dentate gyrus") SubClassOf( ) SubClassOf(Annotation( "NIFSTD"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (aortic valve) AnnotationAssertion(Annotation( ) Annotation( "FMA:FMA"^^xsd:string) "Cardiac valve which has as its parts the anterior, right posterior and left posterior cusps, attached to the fibrous ring of aortic valve.[FMA].") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000815") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( ) "The valve between the left ventricle of the heart and the ascending aorta, consisting of three semilunar cusps. [TFD][VHOG]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0004628") AnnotationAssertion( "EFO:0003879") AnnotationAssertion( "EHDAA2:0000134") AnnotationAssertion( "EHDAA:4410") AnnotationAssertion( "EMAPA:17870") AnnotationAssertion( "FMA:7236") AnnotationAssertion( "GAID:563") AnnotationAssertion( "MA:0000087") AnnotationAssertion( "MESH:D001021") AnnotationAssertion( "NCIT:C12670") AnnotationAssertion( "OpenCyc:Mx4rv5914JwpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Aortic_Valve") "UMLS:C0003501") AnnotationAssertion( "VHOG:0000815") AnnotationAssertion( "galen:AorticValve") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "valva aortae") AnnotationAssertion( "UBERON:0002137") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "Human variation: It is normally tricuspid (with three leaflets), although in 1% of the population it is found to be congenitally bicuspid (two leaflets)") AnnotationAssertion(rdfs:label "aortic valve") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/2/20/Diagram_of_the_human_heart_%28cropped%29.svg"^^xsd:anyURI) SubClassOf(Annotation( "MA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (habenulo-interpeduncular tract) AnnotationAssertion(Annotation( "BIRNLEX:1504") "White matter tract containing fibers projecting from the habenular nuclei to the interpeduncular nucleus (Maryann Martone).") AnnotationAssertion(Annotation( "ISBN:0471888893"^^xsd:string) "present in all fishes and tetrapods") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:fr") AnnotationAssertion( "BIRNLEX:1504") AnnotationAssertion( "BM:HPT") AnnotationAssertion( "DMBA:17790") AnnotationAssertion( "EMAPA:36606") AnnotationAssertion( "FMA:72400") AnnotationAssertion( "HBA:12953") AnnotationAssertion( "MBA:595") AnnotationAssertion( "TAO:0000353") AnnotationAssertion(Annotation( "BIRNLEX:1504") "UMLS:C0228391") AnnotationAssertion( "ZFA:0000353") AnnotationAssertion(Annotation( "BIRNLEX:1504") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=2318") AnnotationAssertion( "Meynert's retroflex bundle") AnnotationAssertion(Annotation( "ISBN:0471888893"^^xsd:string) "fasciculus retroflexus") AnnotationAssertion(Annotation( "BIRNLEX:1504") "fasciculus retroflexus (Meynert)") AnnotationAssertion( "habenulointerpeduncular fasciculus") AnnotationAssertion( "habenulopeduncular tract") AnnotationAssertion(Annotation( "ZFA:0000353") "tractus habenulo-interpeduncularis") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:2318") Annotation( ) "fasciculus habenulo-interpeduncularis") AnnotationAssertion(Annotation( "ZFA:0000353") Annotation( ) "fasciculus retroflexi") AnnotationAssertion(Annotation( "NeuroNames:2318") Annotation( ) "fasciculus retroflexus (of Meynert)") AnnotationAssertion( "habenulointerpeduncular tract") AnnotationAssertion(Annotation( "DMBA:17790") Annotation( ) "rf") AnnotationAssertion(Annotation( "NeuroNames:2318") Annotation( ) "tractus habenulo-intercruralis") AnnotationAssertion(Annotation( "NeuroNames:2318") Annotation( ) "tractus habenulointercruralis") AnnotationAssertion(Annotation( "NeuroNames:2318") Annotation( ) "tractus habenulointerpeduncularis") AnnotationAssertion(Annotation( "NeuroNames:2318") Annotation( ) "tractus retroflexus (Meynert)") AnnotationAssertion( "UBERON:0002138") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "habenulo-interpeduncular tract") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) # Class: (subcommissural organ) AnnotationAssertion(Annotation( ) Annotation( ) "The subcommissural organ is a circumventricular organ consisting of ependymal cells which secrete SCO-spondin[WP,partially vetted].") AnnotationAssertion(Annotation( "multiple"^^xsd:string) ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:SCO") AnnotationAssertion( "BIRNLEX:1028") AnnotationAssertion( "BTO:0001820") AnnotationAssertion( "CALOHA:TS-0986") AnnotationAssertion( "DHBA:12101") AnnotationAssertion( "DMBA:16514") AnnotationAssertion( "EMAPA:35828") AnnotationAssertion( "FMA:72414") AnnotationAssertion( "GAID:794") AnnotationAssertion( "HBA:9489") AnnotationAssertion( "MA:0002941") AnnotationAssertion( "MESH:A08.713.810") AnnotationAssertion( "TAO:0000683") AnnotationAssertion(Annotation( "BIRNLEX:1028") "UMLS:C0038533") AnnotationAssertion( "ZFA:0000683") AnnotationAssertion(Annotation( "BIRNLEX:1028") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=483") AnnotationAssertion( "uberon") AnnotationAssertion( "SCO") AnnotationAssertion(Annotation( "BAMS:SCO") "cerebral aqueduct subcommissural organ") AnnotationAssertion(Annotation( "NeuroNames:483") Annotation( ) "corpus subcommissurale") AnnotationAssertion( "dorsal subcommissural organ") AnnotationAssertion(Annotation( ) Annotation( ) "organum subcommissurale") AnnotationAssertion( "UBERON:0002139") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "Occurs throughout the vertebartes [PMID:9579598, DOI:10.1002/ar.1091260210]. First appears in hagfish(Olsson). In many species, including the human, it reaches its full development during embryonic life[PMID:9579598]. During the course of phyletic evolution, one notes various changes. Indeed, in lower vertebrates, the SCO presents a greater degree of enzyme activity than the ependyma while in birds the ependyma demonstrates a more intense activity than the SCO[PMID:479574] Sometimes preceded by flexural organ[DOI:10.1007/BF00303086]") AnnotationAssertion(rdfs:label "subcommissural organ") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/d/d7/Gray715.png"^^xsd:anyURI) SubClassOf(Annotation( "MA"^^xsd:string) ) SubClassOf(Annotation( "MA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (parabigeminal nucleus) AnnotationAssertion(Annotation( "BIRNLEX:1007") "Cholinergic cell group that is located ventral to the brachium of the inferior colliculus (in rat) and has reciprocal connectivity with the superior colliculus (Adapted from Paxinos, The rat central nervous system, 2nd ed, 1995, pg 865.") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001701") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0471210054 Butler AB, Hodos W, Comparative vertebrate neuroanatomy: Evolution and Adaptation (2005) p.272, DOI:10.1002/cne.22364 Volkmann K, Chen YY, Harris MP, Wullimann MF, Köster RW, The zebrafish cerebellar upper rhombic lip generates tegmental hindbrain nuclei by long-distance migration in an evolutionary conserved manner. The Journal of Comparative Neurology (2010)") "Nucleus isthmi is present in the isthmus in most vertebrates. It is called the parabigeminal nucleus in mammals (reference 1); In sum, our results show that the origin of neurons of some tegmental hindbrain nuclei, namely, nucleus isthmi/superior reticular nucleus and secondary gustatory/viscerosensory nucleus is in the URL (upper rhombic lip), and that the temporal order of cell types produced by the URL and their developmental program are conserved among vertebrate species (reference 2).[well established][VHOG]") AnnotationAssertion(Annotation( "MA"^^xsd:string) "in MA this is part of the tegmentum/brainstem") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:PBG") AnnotationAssertion( "BIRNLEX:1007") AnnotationAssertion( "BM:PBG") AnnotationAssertion( "DHBA:12312") AnnotationAssertion( "DMBA:16862") AnnotationAssertion( "EMAPA:35656") AnnotationAssertion( "FMA:72415") AnnotationAssertion( "HBA:9111") AnnotationAssertion( "MA:0001074") AnnotationAssertion( "MBA:874") AnnotationAssertion(Annotation( "BIRNLEX:1007") "UMLS:C0262301") AnnotationAssertion( "VHOG:0001701") AnnotationAssertion(Annotation( "BIRNLEX:1007") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=482") AnnotationAssertion(Annotation( "NeuroNames:482") "nucleus parabigeminalis") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:482") Annotation( ) "corpus parabigeminum") AnnotationAssertion(Annotation( "VHOG:0001701") "nucleus isthmi") AnnotationAssertion(Annotation( "NeuroNames:482") "parabigeminal nucleus (Bechterew)") AnnotationAssertion(Annotation( "BAMS:PBG") "parageminal nucleus") AnnotationAssertion( "UBERON:0002140") AnnotationAssertion(rdfs:label "parabigeminal nucleus") SubClassOf(Annotation( "FMA"^^xsd:string) Annotation( "NIF"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (parvocellular oculomotor nucleus) AnnotationAssertion(Annotation( "BIRNLEX:822") "Nucleus that is part of the oculomotor nerve complex consisting of preganglionic parasympathetic neurons situated close to the midline at the level of the superior colliculus (Heimer, the Human Brain and Spinal Cord, 1994, pg 244).") AnnotationAssertion( "The Edinger-Westphal nucleus supplies preganglionic parasympathetic fibers to the eye, constricting the pupil, accommodating the lens, and convergence of the eyes. It has also been implicated in the mirroring of pupil size in sad facial expressions[WP]") AnnotationAssertion(Annotation( "NIF"^^xsd:string) "NIFSTD places this in oculomotor nuclear complex but this conflicts with disjointness axioms from MBA, as well as location described in Wikipedia, and is not supported in any other ontology") AnnotationAssertion( "The paired nuclei are posterior to the main motor nucleus (oculomotor nucleus) and anterolateral to the cerebral aqueduct in the rostral midbrain at the level of the superior colliculus. It is the most rostral of the parasympathetic nuclei in the brain stem.[WP]") AnnotationAssertion(Annotation( "HBA:9449") Annotation( ) "EW") AnnotationAssertion(Annotation( "BIRNLEX:822") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "PC3") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:EW") AnnotationAssertion( "BAMS:PC3") AnnotationAssertion( "BIRNLEX:822") AnnotationAssertion( "BM:EW") AnnotationAssertion( "DHBA:12219") AnnotationAssertion( "EMAPA:35302") AnnotationAssertion( "FMA:72424") AnnotationAssertion( "HBA:9449") AnnotationAssertion( "MA:0001071") AnnotationAssertion( "MBA:975") AnnotationAssertion( "TAO:0000244") AnnotationAssertion(Annotation( "BIRNLEX:822") "UMLS:C0228416") AnnotationAssertion( "ZFA:0000244") AnnotationAssertion(Annotation( "BIRNLEX:822") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=498") AnnotationAssertion(Annotation( ) Annotation( "MA:0001071") "Edinger-Westphal nucleus") AnnotationAssertion(Annotation( ) "accessory oculomotor nucleus") AnnotationAssertion(Annotation( "ZFA:0000244") "nucleus Edinger-Westphal") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:498") "Edinger-Westphal nucleus of oculomotor nerve") AnnotationAssertion(Annotation( "NeuroNames:498") Annotation( ) "nuclei accessorii nervi oculomtorii (Edinger-Westphal)") AnnotationAssertion(Annotation( "NeuroNames:498") Annotation( ) "nucleus Edinger Westphal") AnnotationAssertion(Annotation( "NeuroNames:498") Annotation( ) "nucleus Westphal-Edinger") AnnotationAssertion(Annotation( "NeuroNames:498") Annotation( ) "nucleus nervi oculomotorii Edinger-Westphal") AnnotationAssertion(Annotation( "NeuroNames:498") Annotation( ) "nucleus nervi oculomotorii parvocellularis") AnnotationAssertion(Annotation( "NeuroNames:498") Annotation( ) "nucleus rostralis nervi oculomotorii") AnnotationAssertion(Annotation( "NeuroNames:498") "oculomotor nucleus, parvicellular part") AnnotationAssertion(Annotation( "BIRNLEX:822") Annotation( ) "oculomotor nucleus, parvocellular part") AnnotationAssertion( "UBERON:0002141") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "parvocellular oculomotor nucleus") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) Annotation( "MA"^^xsd:string) Annotation( "ZFA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (pedunculopontine tegmental nucleus) AnnotationAssertion(Annotation( ) Annotation( ) "The pedunculopontine nucleus (PPN) (or pedunculopontine tegmental nucleus, PPTN) is located in the brainstem, caudal to the substantia nigra and adjacent to the superior cerebellar peduncle. It is composed by a wide variety of neurochemical cell types, including cholinergic, glutamatergic and GABAergic cells. In the classical sense, the PPN is considered to be one of the main components of the reticular activating system. [WP,unvetted].") AnnotationAssertion(Annotation( "BIRNLEX:1437") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "PPTg") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:PPN") AnnotationAssertion( "BAMS:PPTg") AnnotationAssertion( "BIRNLEX:1437") AnnotationAssertion( "BM:Pons-PPT") AnnotationAssertion( "DHBA:12413") AnnotationAssertion( "DMBA:16965") AnnotationAssertion( "EMAPA:35672") AnnotationAssertion( "FMA:72429") AnnotationAssertion( "HBA:9021") AnnotationAssertion( "MA:0001020") AnnotationAssertion( "MBA:1052") AnnotationAssertion(Annotation( "BIRNLEX:1437") "UMLS:C0262306") AnnotationAssertion(Annotation( "BIRNLEX:1437") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=504") AnnotationAssertion( "peduncular pontine nucleus") AnnotationAssertion( "pedunculopontine nucleus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:504") Annotation( ) "nucleus pedunculopontinus") AnnotationAssertion(Annotation( "NeuroNames:504") Annotation( ) "nucleus tegmenti pedunculopontinus") AnnotationAssertion( "UBERON:0002142") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "pedunculopontine tegmental nucleus") SubClassOf( ) # Class: (dorsal tegmental nucleus) AnnotationAssertion(Annotation( "BIRNLEX:992") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "DTg") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:DTN") AnnotationAssertion( "BAMS:DTg") AnnotationAssertion( "BIRNLEX:992") AnnotationAssertion( "BM:TD") AnnotationAssertion( "DHBA:12508") AnnotationAssertion( "DMBA:17000") AnnotationAssertion( "EMAPA:35294") AnnotationAssertion( "FMA:72434") AnnotationAssertion( "HBA:265504876") AnnotationAssertion( "MA:0001013") AnnotationAssertion( "MBA:880") AnnotationAssertion( "TAO:0000346") AnnotationAssertion(Annotation( "BIRNLEX:992") "UMLS:C0175393") AnnotationAssertion( "VHOG:0001368") AnnotationAssertion( "ZFA:0000346") AnnotationAssertion(Annotation( "BIRNLEX:992") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=517") AnnotationAssertion( "dorsal tegmental nucleus (Gudden)") AnnotationAssertion(Annotation( "BIRNLEX:992") "dorsal tegmental nucleus of Gudden") AnnotationAssertion( "gudden nucleus") AnnotationAssertion(Annotation( "ZFA:0000346") "nucleus tegmentalis dorsalis") AnnotationAssertion(Annotation( "FMA:72434") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "nucleus tegmentalis posterior") AnnotationAssertion( "posterior tegmental nucleus") AnnotationAssertion( "von Gudden's nucleus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "ZFA:0000346") Annotation( ) "DTN") AnnotationAssertion(Annotation( "NeuroNames:517") Annotation( ) "ganglion dorsale tegmenti") AnnotationAssertion(Annotation( "NeuroNames:517") Annotation( ) "nucleus compactus suprafascicularis") AnnotationAssertion(Annotation( "NeuroNames:517") Annotation( ) "nucleus dorsalis tegmenti") AnnotationAssertion(Annotation( "NeuroNames:517") Annotation( ) "nucleus dorsalis tegmenti (Gudden)") AnnotationAssertion(Annotation( "NeuroNames:517") Annotation( ) "nucleus opticus dorsalis") AnnotationAssertion(Annotation( "NeuroNames:517") Annotation( ) "nucleus tegmenti dorsale") AnnotationAssertion( "UBERON:0002143") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "dorsal tegmental nucleus") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (peripeduncular nucleus) AnnotationAssertion(Annotation( ) "A group of neuron cell bodies that form a thin, caplike configuration over the dorsolateral aspect of the crus cerebri; many of its cells are acetylcholinesterase positive.") AnnotationAssertion(Annotation( "FMA"^^xsd:string) "FMA and NIF support this being part of midbrain tegmentum; MA places this in the thalamus and ABA supports thalamus. todo - check. for now we take a conservative position and assert overlaps for both rather than part of") AnnotationAssertion(Annotation( "BIRNLEX:1474") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "PPd") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:PP") AnnotationAssertion( "BAMS:PPd") AnnotationAssertion( "BIRNLEX:1474") AnnotationAssertion( "BM:MB-PPN") AnnotationAssertion( "DHBA:12285") AnnotationAssertion( "DMBA:16342") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37717") AnnotationAssertion( "FMA:72437") AnnotationAssertion( "HBA:9050") AnnotationAssertion( "MA:0000875") AnnotationAssertion( "MBA:1044") AnnotationAssertion(Annotation( "BIRNLEX:1474") "UMLS:C0152368") AnnotationAssertion(Annotation( "BIRNLEX:1474") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=520") AnnotationAssertion(Annotation( "FMA:72437") "peripeduncular nucleus of pons") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:520") Annotation( ) "nucleus peripeduncularis") AnnotationAssertion(Annotation( "NeuroNames:520") Annotation( ) "nucleus peripeduncularis thalami") AnnotationAssertion( "UBERON:0002144") AnnotationAssertion(rdfs:label "peripeduncular nucleus") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "NIFSTD"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "MA"^^xsd:string) ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) # Class: (interpeduncular nucleus) AnnotationAssertion(Annotation( "BIRNLEX:1000") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "IP") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:IPN") AnnotationAssertion( "BIRNLEX:1000") AnnotationAssertion( "BM:MB-IP") AnnotationAssertion( "DHBA:12270") AnnotationAssertion( "EMAPA:35439") AnnotationAssertion( "FMA:72439") AnnotationAssertion( "HBA:9012") AnnotationAssertion( "MA:0001069") AnnotationAssertion( "MBA:100") AnnotationAssertion( "TAO:0000903") AnnotationAssertion(Annotation( "BIRNLEX:1000") "UMLS:C0175398") AnnotationAssertion( "ZFA:0000903") AnnotationAssertion(Annotation( "BIRNLEX:1000") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=522") AnnotationAssertion( "interpeduncular ganglion") AnnotationAssertion(Annotation( ) "interpeduncular nuclei") AnnotationAssertion( "interpeduncular nucleus of midbrain") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "MTB:379") "interpedunclear nucleus") AnnotationAssertion(Annotation( "NeuroNames:522") "interpeduncular nucleus (Gudden)") AnnotationAssertion(Annotation( "TAO:0000903") "interpeduncular nucleus tegmentum") AnnotationAssertion(Annotation( "NeuroNames:522") Annotation( ) "nucleus interpeduncularis") AnnotationAssertion(Annotation( "NeuroNames:522") Annotation( ) "nucleus interpeduncularis medialis") AnnotationAssertion( "UBERON:0002145") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "interpeduncular nucleus") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "NIF"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (pulmonary valve) AnnotationAssertion(Annotation( ) "The semilunar valve of the heart that lies between the right ventricle and the pulmonary artery.") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000814") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( ) "The valve with semilunar cusps at the entrance to the pulmonary trunk from the right ventricle of the heart. [TFD][VHOG]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0001577") AnnotationAssertion( "EHDAA:4412") AnnotationAssertion( "EMAPA:17872") AnnotationAssertion( "FMA:7246") AnnotationAssertion( "GAID:566") AnnotationAssertion( "MA:0000089") AnnotationAssertion( "MESH:D011664") AnnotationAssertion( "NCIT:C12775") AnnotationAssertion( "OpenCyc:Mx4rwP6uq5wpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Pulmonary_Valve") "UMLS:C0034086") AnnotationAssertion( "VHOG:0000814") AnnotationAssertion( "galen:PulmonaryValve") AnnotationAssertion( "pulmonic valve") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "valva trunci pulmonalis") AnnotationAssertion( "UBERON:0002146") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "pulmonary valve") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/2/20/Diagram_of_the_human_heart_%28cropped%29.svg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (reticulotegmental nucleus) AnnotationAssertion(Annotation( ) "The tegmental pontine reticular nucleus (or pontine reticular nucleus of the tegmentum) is an area within the floor of the midbrain. This area is known to affect the cerebellum with its axonal projections. These efferent connections have been proven to project not only ipsilaterally, but also to decussate and project to the contralateral side of the vermis. It has also been shown that the projections from the tegmenti pontis to the cerebellar lobes are only crossed fibers. The n.r. tegmenti pontis also receives afferent axons from the cerebellum. This nucleus is known for its large amount of multipolar cells and its particularly reticular structure. The n.r. tegmenti pontis is topographically related to pontine nuclei (non-reticular), being just dorsal to them. The nucleus reticularis has been known to mediate eye movements, otherwise known as so-called saccadic movement. This makes sense concerning their connections as it would require a nucleus which receives and projects to the cerebellum to mediate that kind of complex circuitry. Also, behaviorally this makes sense as no one thinks about saccadic movements when scanning a room and the saccadic movements are not directly controlled by the cortex. The nuclei of the cerebellum are the most traditionally studied mostly because it is easy to see which nuclei degrade when the cerebellum is amputated. The neurons of the lateral reticular formation are very important for reflexes and the mediation of posture. It has been shown in cats that electrical stimulation of the reticular formation can make a standing cat lie down. Conversely if the cat is stimulated in an alternate spot it can make a lying cat stand.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:RtTg") AnnotationAssertion( "BAMS:TRN") AnnotationAssertion( "BIRNLEX:882") AnnotationAssertion( "DHBA:12414") AnnotationAssertion( "DHBA:12497") AnnotationAssertion( "EMAPA:35736") AnnotationAssertion( "FMA:72471") AnnotationAssertion( "HBA:9167") AnnotationAssertion( "MA:0001025") AnnotationAssertion( "MBA:574") AnnotationAssertion(Annotation( "FMA:72471") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "nucleus reticularis tegmenti pontis") AnnotationAssertion( "reticular tegmental nucleus") AnnotationAssertion( "reticulotegmental nucleus of pons") AnnotationAssertion( "tegmental reticular nucleus, pontine gray") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BAMS:RtTg") "reticulotegmental nucleus of the pons") AnnotationAssertion(Annotation( "BAMS:TRN") "tegmental reticular nucleus") AnnotationAssertion( "UBERON:0002147") AnnotationAssertion(rdfs:label "reticulotegmental nucleus") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (locus ceruleus) AnnotationAssertion(Annotation( ) Annotation( "GAID:577") Annotation( "GO:0021703") "The locus ceruleus is a dense cluster of neurons within the dorsorostral pons. This nucleus is the major location of neurons that release norepinephrine throughout the brain, and is responsible for physiological responses to stress and panic[GO]. Bluish region in the superior angle of the fourth ventricle floor, corresponding to melanin-like pigmented nerve cells which lie lateral to the ponto-mesencephalic central gray (griseum centrale). It is also known as nucleus pigmentosus pontis[GAID].") AnnotationAssertion( "TODO - check ZFA/pons. also GO says part of dorsorostral pons") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:CAE") AnnotationAssertion( "BAMS:LC") AnnotationAssertion( "BIRNLEX:905") AnnotationAssertion( "BM:Pons-LC") AnnotationAssertion( "BTO:0001408") AnnotationAssertion( "DHBA:12819") AnnotationAssertion( "DMBA:16972") AnnotationAssertion( "EFO:0001963") AnnotationAssertion( "EMAPA:35502") AnnotationAssertion( "FMA:72478") AnnotationAssertion( "GAID:577") AnnotationAssertion( "HBA:9148") AnnotationAssertion( "MA:0001017") AnnotationAssertion( "MBA:147") AnnotationAssertion( "MESH:D008125") AnnotationAssertion( "NCIT:C97333") AnnotationAssertion( "TAO:0000539") AnnotationAssertion(Annotation( "BIRNLEX:905") "UMLS:C0023951") AnnotationAssertion(Annotation( "ncithesaurus:Locus_Coeruleus") "UMLS:C0023951") AnnotationAssertion( "ZFA:0000539") AnnotationAssertion(Annotation( "BIRNLEX:905") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=583") AnnotationAssertion(Annotation( "BIRNLEX:905") "blue nucleus") AnnotationAssertion( "caerulean nucleus") AnnotationAssertion(Annotation( "BIRNLEX:905") "locus caeruleus") AnnotationAssertion( "locus coeruleu") AnnotationAssertion( "locus coeruleus") AnnotationAssertion(Annotation( "FMA:72478") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "nucleus caeruleus") AnnotationAssertion( "nucleus of locus caeruleus") AnnotationAssertion(Annotation( "BIRNLEX:905") "nucleus pigmentosus pontis") AnnotationAssertion(Annotation( "BIRNLEX:905") "substantia ferruginea") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "ZFA:0000539") Annotation( ) "loci coeruleus") AnnotationAssertion(Annotation( "BTO:0001408") "locus cinereus") AnnotationAssertion(Annotation( "NeuroNames:583") "locus coeruleus (Vicq d'Azyr)") AnnotationAssertion(Annotation( "NeuroNames:583") Annotation( ) "nucleus loci caerulei") AnnotationAssertion( "UBERON:0002148") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "locus ceruleus") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/7/77/Gray709.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "check ZFA") Annotation( "NIFSTD"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (superior salivatory nucleus) AnnotationAssertion(Annotation( "BIRNLEX:1131") "Nucleus containing parasympathetic neurons giving rise to the parasympathetic division of the facial nerve, innervating the salivary glands (Brodal, Neurological Anatomy, 3rd ed., 1981, pg 703).") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:SSN") AnnotationAssertion( "BAMS:SuS") AnnotationAssertion( "BIRNLEX:1131") AnnotationAssertion( "DHBA:12435") AnnotationAssertion( "EHDAA2:0004646") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37756") AnnotationAssertion( "FMA:72482") AnnotationAssertion( "HBA:9194") AnnotationAssertion( "MA:0001027") AnnotationAssertion( "MBA:462") AnnotationAssertion(Annotation( "BIRNLEX:1131") "UMLS:C0175447") AnnotationAssertion(Annotation( "BIRNLEX:1131") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=590") AnnotationAssertion(Annotation( "GO:0021753") "superior salivary nucleus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:590") Annotation( ) "nucleus salivarius superior") AnnotationAssertion(Annotation( "NeuroNames:590") Annotation( ) "nucleus salivatorius cranialis") AnnotationAssertion(Annotation( "NeuroNames:590") Annotation( ) "nucleus salivatorius rostralis") AnnotationAssertion(Annotation( "NeuroNames:590") Annotation( ) "nucleus salivatorius superior") AnnotationAssertion( "UBERON:0002149") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "superior salivatory nucleus") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/6/6b/Gray788.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "definitional"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (superior cerebellar peduncle) AnnotationAssertion(Annotation( "BIRNLEX:1711") "A composite structure of the brain stem, which in NeuroNames is subdivided into the superior cerebellar peduncle of pons, the decussation of superior cerebellar peduncle and the superior cerebellar peduncle of midbrain (MM).") AnnotationAssertion( "we follow NIF in dividing this into 3 parts. This allows for consistency with ABA") AnnotationAssertion(Annotation( "TAO") "we make the TAO class disjoint for now as it's not clear if this is the analagous structure") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:5") AnnotationAssertion( "BAMS:scp") AnnotationAssertion( "BIRNLEX:1711") AnnotationAssertion( "BM:BC") AnnotationAssertion( "DHBA:12354") AnnotationAssertion( "DMBA:17793") AnnotationAssertion( "HBA:9297") AnnotationAssertion( "MA:0002746") AnnotationAssertion( "MBA:326") AnnotationAssertion(Annotation( "BIRNLEX:1711") "UMLS:C0152391") AnnotationAssertion(Annotation( "BIRNLEX:1711") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=1736") AnnotationAssertion(Annotation( "BIRNLEX:1711") "brachium conjunctivum") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:1736") Annotation( ) "crus cerebello-cerebrale") AnnotationAssertion(Annotation( "NeuroNames:1736") Annotation( ) "pedunculus cerebellaris cranialis") AnnotationAssertion(Annotation( "NeuroNames:1736") Annotation( ) "pedunculus cerebellaris rostralis") AnnotationAssertion(Annotation( ) Annotation( ) "pedunculus cerebellaris superior") AnnotationAssertion(Annotation( "MBA:326") Annotation( ) "scp") AnnotationAssertion(Annotation( "MBA:326") Annotation( ) "superior cerebelar peduncles") AnnotationAssertion(Annotation( "NeuroNames:1736") "superior cerebellar peduncle (Galen, Stilling)") AnnotationAssertion(Annotation( "BAMS:scp") "superior cerebellar peduncle (brachium conjuctivum)") AnnotationAssertion(Annotation( "BAMS:scp") "superior cerebellar peduncle (brachium conjunctivum)") AnnotationAssertion(Annotation( ) "superior peduncle") AnnotationAssertion(Annotation( "NeuroNames:1736") Annotation( ) "tractus cerebello-rubralis") AnnotationAssertion(Annotation( "NeuroNames:1736") Annotation( ) "tractus cerebello-tegmentalis mesencephali") AnnotationAssertion( "UBERON:0002150") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "superior cerebellar peduncle") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/9/97/Gray704.png"^^xsd:anyURI) SubClassOf( ) # Class: (pontine nuclear group) AnnotationAssertion(Annotation( "BIRNLEX:1516") "Nuclei in the basal pons, intermingled among the descending axons from the cortex, that receive neocrotcial input and give rise to many axons that cross the midline to enter the contralateral cerebellum (Butler and Hodos, Comparative Vertebrate Neuroanatomy, 2nd ed., 2005, pg 135).") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:PG") AnnotationAssertion( "BAMS:Pn") AnnotationAssertion( "BIRNLEX:1516") AnnotationAssertion( "BM:Pons-PGr") AnnotationAssertion( "BTO:0003396") AnnotationAssertion( "DHBA:12406") AnnotationAssertion( "EMAPA:35692") AnnotationAssertion( "FMA:72512") AnnotationAssertion( "HBA:9133") AnnotationAssertion( "MA:0001021") AnnotationAssertion( "MBA:931") AnnotationAssertion(Annotation( "BIRNLEX:1516") "UMLS:C0228448") AnnotationAssertion(Annotation( "BIRNLEX:1516") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=617") AnnotationAssertion(Annotation( "BIRNLEX:1516") "pontine gray") AnnotationAssertion(Annotation( "BIRNLEX:1516") "pontine nuclear complex") AnnotationAssertion(Annotation( "FMA:72512") "pontine nuclear group") AnnotationAssertion( "pontine nuclei") AnnotationAssertion( "pontine nucleus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:617") Annotation( ) "nuclei brachii pontis") AnnotationAssertion(Annotation( ) Annotation( ) "nuclei pontis") AnnotationAssertion(Annotation( "BTO:0003396") "nuclei pontis") AnnotationAssertion(Annotation( "NeuroNames:617") Annotation( ) "nucleus pontis") AnnotationAssertion(Annotation( "BTO:0003396") "pontine gray matter") AnnotationAssertion(Annotation( "BAMS:PG") "pontine grey matter") AnnotationAssertion( "UBERON:0002151") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "pontine nuclear group") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/d/dc/Lower_pons_horizontal_KB.svg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (middle cerebellar peduncle) AnnotationAssertion(Annotation( "BIRNLEX:1529") "Regional part of medullary white matter (according to Neuronames) primarily found at the level of the pons, consisting of a very large bundle of fibers originating in the pontine nuclei projecting to the cerebellum (MM).") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:BP") AnnotationAssertion( "BAMS:bp") AnnotationAssertion( "BAMS:mcp") AnnotationAssertion( "BIRNLEX:1529") AnnotationAssertion( "BM:Pons-BP") AnnotationAssertion( "DHBA:12768") AnnotationAssertion( "FMA:72515") AnnotationAssertion( "HBA:9294") AnnotationAssertion( "MA:0002745") AnnotationAssertion( "MBA:78") AnnotationAssertion( "NIFSTD_RETIRED:birnlex_1699") AnnotationAssertion(Annotation( "BIRNLEX:1529") "UMLS:C0152392") AnnotationAssertion(Annotation( "BIRNLEX:1529") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=620") AnnotationAssertion(Annotation( "BIRNLEX:1529") "brachium pontis") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BAMS:bp") "brachium pontis (stem of middle cerebellar peduncle)") AnnotationAssertion(Annotation( "NeuroNames:620") Annotation( ) "crus cerebelli ad pontem") AnnotationAssertion(Annotation( "NeuroNames:620") Annotation( ) "crus ponto-cerebellare") AnnotationAssertion(Annotation( "NeuroNames:620") "mid-cerebellar peduncle") AnnotationAssertion(Annotation( "NeuroNames:620") Annotation( ) "pedunculus cerebellaris medialis") AnnotationAssertion(Annotation( ) Annotation( ) "pedunculus cerebellaris medius") AnnotationAssertion(Annotation( "NeuroNames:620") Annotation( ) "pedunculus cerebellaris pontinus") AnnotationAssertion( "UBERON:0002152") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "middle cerebellar peduncle") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/2/2b/Gray705.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (fastigial nucleus) AnnotationAssertion(Annotation( "ISBN:0-683-40008-8"^^xsd:string) Annotation( "MP:0009983") "The most medial of the cerebellar nuclei; it receives its afferent input from Purkinje cells of the flocculonodular lobe and the vermis, and most of its efferent connections travel via the inferior cerebellar peduncle to the vestibular nuclei and to the medullary reticular formation.") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001699") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0471210054 Butler AB, Hodos W, Comparative vertebrate neuroanatomy: Evolution and Adaptation (2005) p.260-261") "One or more deep cerebellar nuclei appear in agnathans, sharks, ropefishes, lungfishes, Latimeria, and amphibians. Reptiles have two nuclei (a medial and a lateral), and birds and mammals have three nuclei (a medial, a lateral, and an interposed nucleus). The medial nucleus of mammals is known as the fastigial nucleus, and the lateral nucleus is known as the dentate nucleus.[well established][VHOG]") AnnotationAssertion( "UBERON:0008997") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:C8M") AnnotationAssertion( "BAMS:FN") AnnotationAssertion( "BAMS:Fas") AnnotationAssertion( "BIRNLEX:1146") AnnotationAssertion( "BM:CB-CBM") AnnotationAssertion( "BTO:0003839") AnnotationAssertion( "DHBA:12402") AnnotationAssertion( "DMBA:16823") AnnotationAssertion( "FMA:72537") AnnotationAssertion( "HBA:12948") AnnotationAssertion( "MA:0001009") AnnotationAssertion( "MBA:989") AnnotationAssertion(Annotation( "BIRNLEX:1146") "UMLS:C0175490") AnnotationAssertion( "VHOG:0001699") AnnotationAssertion(Annotation( "BIRNLEX:1146") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=690") AnnotationAssertion( "medial (fastigial) nucleus") AnnotationAssertion( "medial cerebellar nucleus") AnnotationAssertion(Annotation( "BTO:0003839") "nucleus fastigii") AnnotationAssertion( "roof nucleus-1") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BAMS:Fas") "fasciculosus thalamic nucleus") AnnotationAssertion(Annotation( "NeuroNames:690") "fastigial cerebellar nucleus") AnnotationAssertion(Annotation( "NeuroNames:690") "medial nucleus of cerebellum") AnnotationAssertion(Annotation( "NeuroNames:690") Annotation( ) "nucleus (motorius) tecti cerebelli") AnnotationAssertion(Annotation( "NeuroNames:690") Annotation( ) "nucleus fastigiatus") AnnotationAssertion(Annotation( ) Annotation( ) "nucleus fastigii") AnnotationAssertion(Annotation( "NeuroNames:690") Annotation( ) "nucleus fastigii cerebelli") AnnotationAssertion(Annotation( "NeuroNames:690") Annotation( ) "nucleus fastigius cerebelli") AnnotationAssertion( "UBERON:0002153") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "fastigial nucleus") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/2/23/Gray707.png"^^xsd:anyURI) SubClassOf( ) # Class: (lateral reticular nucleus) AnnotationAssertion(Annotation( ) "A nucleus of the lateral medullary nuclear complex.") AnnotationAssertion(Annotation( "ABA") "in ABA this is disjoint from MDR, but we relax this here to accomodate FMA") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:LRN") AnnotationAssertion( "BAMS:LRt") AnnotationAssertion( "BM:LR") AnnotationAssertion( "EMAPA:35484") AnnotationAssertion( "FMA:72574") AnnotationAssertion( "HBA:9616") AnnotationAssertion( "MA:0001047") AnnotationAssertion( "MBA:235") AnnotationAssertion( "NLXANAT:20081246") AnnotationAssertion( "TAO:0000535") AnnotationAssertion( "ZFA:0000535") AnnotationAssertion( "lateral reticular nucleus (medulla)") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "ZFA:0000535") Annotation( ) "lateral reticular nuclei") AnnotationAssertion(Annotation( ) Annotation( ) "nucleus reticularis lateralis medullae oblongatae") AnnotationAssertion( "UBERON:0002154") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "lateral reticular nucleus") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (gigantocellular nucleus) AnnotationAssertion(Annotation( "NLXANAT:1005001") "Nucleus located in the rostral ventrolateral medulla. The PGL was originally identified by cytoarchitectural criteria in the human medulla (Olszewski and Baxter, 1954). In humans, the PGL is located in the ventrolateral quadrant of the rostral medullary tegmentum between the nucleus subtrigeminalis caudally, trapezoid body and the superior olive rostrally, nucleus gigantocellularis medially, spinothalamic tract fibers laterally, inferior olive ventrally, and the nucleus ambiguous dorsally (Olszewski and Baxter, 1954). In the rat, the PGL has been further subdivided into retrofacial PGL (caudal to the facial nucleus), and more rostrally located juxtafacial PGL (medial to the facial nucleus), based upon different connectivity.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:GRN") AnnotationAssertion( "BAMS:Gi") AnnotationAssertion( "DHBA:12625") AnnotationAssertion( "EMAPA:35378") AnnotationAssertion( "FMA:72576") AnnotationAssertion( "HBA:9597") AnnotationAssertion( "HBA:9602") AnnotationAssertion( "MA:0001037") AnnotationAssertion( "MBA:1048") AnnotationAssertion( "NLXANAT:1005001") AnnotationAssertion(Annotation( "HBA:GiRt") "gigantocellular group") AnnotationAssertion(Annotation( "DHBA:GiRt") "gigantocellular reticular nuclei") AnnotationAssertion( "gigantocellular reticular nucleus") AnnotationAssertion(Annotation( "FMA:72576") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "nucleus gigantocellularis") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NLXANAT:1005001") "nucleus reticularis gigantocellularis") AnnotationAssertion( "UBERON:0002155") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "gigantocellular nucleus") SubClassOf( ) # Class: (nucleus raphe magnus) AnnotationAssertion(Annotation( ) "The nucleus raphe magnus, located directly rostral to the raphe obscurus, is afferently stimulated from axons in the spinal cord and cerebellum. This makes the magnus a likely candidate for part of the motor system; however, it seems to participate in the endogenous analgesia system. The magnus receives descending afferents from the periaqueductal gray, the paraventricular hypothalamic nucleus, central nucleus of the amygdala, lateral hypothalamic area, parvocellular reticular nucleus and the prelimbic, infralimbic, medial and lateral precentral cortices . All of these brain areas influence the main function of the raphe magnus. The main function of the magnus is mostly pain mediation; in fact it sends projections to the dorsal horn of the spinal cord to directly inhibit pain. The periaquiductal gray, the epicenter of analgesia, sends efferent connections to the nucleus raphe magnus in when it is stimulated by opiates (endogenous or otherwise). Electrical stimulation of the PAG produces analgesia, as well as administration of morphine to the PAG or n.r. magnus. The antinociceptic effects of electrical stimulation of the PAG can be blocked by administering naloxone, an opiate antagonist, to the n.r. magnus. All of this seems to indicate that the magnus is part of the endogenous opiate system, and acts to inhibit pain in the spinal cord. [WP,unvetted].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:RM") AnnotationAssertion( "BAMS:RMg") AnnotationAssertion( "BIRNLEX:1363") AnnotationAssertion( "DHBA:12642") AnnotationAssertion( "EFO:0002518") AnnotationAssertion( "EMAPA:35720") AnnotationAssertion( "FMA:72584") AnnotationAssertion( "HBA:9643") AnnotationAssertion( "MA:0001024") AnnotationAssertion( "MBA:206") AnnotationAssertion(Annotation( "BIRNLEX:1363") "UMLS:C0175515") AnnotationAssertion(Annotation( "BIRNLEX:1363") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=739") AnnotationAssertion( "magnus raphe nucleus") AnnotationAssertion(Annotation( "FMA:72584") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "nucleus raphes magnus") AnnotationAssertion(Annotation( "BIRNLEX:1363") "raphe magnus nucleus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BAMS:RM") "nucleus raphC) magnus") AnnotationAssertion(Annotation( ) Annotation( ) "nucleus raphes magnus") AnnotationAssertion(Annotation( ) "raphe magnus") AnnotationAssertion(Annotation( "BAMS:RM") "red nucleus, magnocellular division") AnnotationAssertion( "UBERON:0002156") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "nucleus raphe magnus") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/9/94/Gray694.png"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) Annotation( "NIF"^^xsd:string) Annotation( "Wikipedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (nucleus raphe pallidus) AnnotationAssertion(Annotation( ) "The nucleus raphe pallidus receives afferent connections from the periaqueductal gray, the paraventricular hypothalamic nucleus, central nucleus of the amygdala, lateral hypothalamic area, and parvocellular reticular nucleus. Also, the pallidus receives afferents from the medial preoptic area, median preoptic nucleus and lateral paragigantocellular reticular nuclei . The pallidus has recently been shown to be involved in the activation of a fever as an immunoreaction. It has been implied that the preoptic area is constantly inhibiting the raphe pallidus, especially the rostral portion, with GABA. When the preoptic area receives immune signals from the body, the inhibition stops and the rostral portion of the raphe pallidus excites the intermediolateral cell column, which induces a fever . The raphe pallidus has also been known to mediate the tachycardia response, an extremely high heart rate known to be incited by emotional or psychological stress. Microinjections of a GABA-a antagonist into the raphe pallidus, induces an increased heart rate. Conversely, microinjections of muscimol, a GABA-a agonist, inhibit tachycardia in rats under air-stress stimuli. In both of these cases, GABA is mediating two different sympathetic responses, so clearly the nucleus raphe pallidus is a far more a complex nucleus than previously thought. [WP,unvetted].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:RPA") AnnotationAssertion( "BAMS:RPa") AnnotationAssertion( "BIRNLEX:1375") AnnotationAssertion( "DHBA:12644") AnnotationAssertion( "EMAPA:35722") AnnotationAssertion( "FMA:72586") AnnotationAssertion( "HBA:9649") AnnotationAssertion( "MA:0001051") AnnotationAssertion( "MBA:230") AnnotationAssertion(Annotation( "BIRNLEX:1375") "UMLS:C0175517") AnnotationAssertion(Annotation( "BIRNLEX:1375") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=741") AnnotationAssertion(Annotation( "FMA:72586") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "nucleus raphes pallidus") AnnotationAssertion( "pallidal raphe nucleus") AnnotationAssertion( "raphe pallidus nucleus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BAMS:RPA") "nucleus raphC) pallidus") AnnotationAssertion(Annotation( ) Annotation( ) "nucleus raphes pallidus") AnnotationAssertion( "UBERON:0002157") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "nucleus raphe pallidus") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/9/94/Gray694.png"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (principal inferior olivary nucleus) AnnotationAssertion(Annotation( ) "The inferior olivary nucleus that consists of the major laminar structure.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:IOPr") AnnotationAssertion( "BAMS:IOpr") AnnotationAssertion( "BAMS:PrIO") AnnotationAssertion( "DHBA:12610") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37615") AnnotationAssertion( "FMA:72592") AnnotationAssertion( "HBA:9564") AnnotationAssertion( "MA:0001046") AnnotationAssertion( "NLXANAT:20081248") AnnotationAssertion( "chief inferior olivary nucleus") AnnotationAssertion(Annotation( "NLXANAT:20081248") "convoluted olive") AnnotationAssertion( "inferior olivary complex, principal olive") AnnotationAssertion( "inferior olive principal nucleus") AnnotationAssertion( "inferior olive, principal nucleus") AnnotationAssertion( "main olivary nucleus") AnnotationAssertion(Annotation( "FMA:72592") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "nucleus olivaris principalis") AnnotationAssertion( "principal nucleus of inferior olive") AnnotationAssertion( "principal olivary nucleus") AnnotationAssertion(Annotation( "NLXANAT:20081248") "principal olive") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BAMS:IOpr") "inferior olivary complex principal olive") AnnotationAssertion( "UBERON:0002158") AnnotationAssertion(rdfs:label "principal inferior olivary nucleus") SubClassOf( ) # Class: (medial accessory inferior olivary nucleus) AnnotationAssertion(Annotation( ) "The inferior olivary nucleus that lies between the primary olivary nucleus and the pyramid, and forms a curved lamina, the concavity of which is directed laterally.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:IOM") AnnotationAssertion( "BAMS:MIO") AnnotationAssertion( "DHBA:12605") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37614") AnnotationAssertion( "FMA:72594") AnnotationAssertion( "HBA:9563") AnnotationAssertion( "MA:0001045") AnnotationAssertion( "inferior olivary complex, medial accessory olive") AnnotationAssertion( "inferior olive medial nucleus") AnnotationAssertion( "inferior olive, medial nucleus") AnnotationAssertion( "medial accessory olivary nucleus") AnnotationAssertion(Annotation( "FMA:72594") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "nucleus olivaris accessorius medialis") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002159") AnnotationAssertion(rdfs:label "medial accessory inferior olivary nucleus") SubClassOf( ) # Class: (nucleus prepositus) AnnotationAssertion(Annotation( "BIRNLEX:2652") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "PrP") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:PRP") AnnotationAssertion( "BAMS:Pr") AnnotationAssertion( "BAMS:PrP") AnnotationAssertion( "BIRNLEX:2652") AnnotationAssertion( "DHBA:12615") AnnotationAssertion( "EMAPA:36622") AnnotationAssertion( "FMA:72596") AnnotationAssertion( "HBA:9639") AnnotationAssertion( "MA:0001023") AnnotationAssertion( "MBA:169") AnnotationAssertion(Annotation( "BIRNLEX:2652") "UMLS:C0152399") AnnotationAssertion(Annotation( "BIRNLEX:2652") "UMLS:C1289505") AnnotationAssertion(Annotation( "BIRNLEX:2652") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=758") AnnotationAssertion(Annotation( "BIRNLEX:2652") "nucleus praepositus") AnnotationAssertion( "prepositus hypoglossal nucleus") AnnotationAssertion( "prepositus nucleus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:758") Annotation( ) "nucleus praepositus hypoglossi") AnnotationAssertion(Annotation( "NeuroNames:758") Annotation( ) "nucleus prepositus hypoglossi") AnnotationAssertion( "nucleus prepositus hypoglossus") AnnotationAssertion(Annotation( "NeuroNames:758") "prepositus nucleus (Marburg)") AnnotationAssertion( "UBERON:0002160") AnnotationAssertion(rdfs:label "nucleus prepositus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (gracile nucleus) AnnotationAssertion(Annotation( "BIRNLEX:2643") "Nucleus in the caudal medulla that receive projections primarily from ipsilateral dorsal root ganglion cells via the posterior column of the spinal cord.") AnnotationAssertion( "in species with reduced hindlimbs (e.g. cetaceans) the size of this nucleus is reduced") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:GR") AnnotationAssertion( "BAMS:Gr") AnnotationAssertion( "BIRNLEX:2643") AnnotationAssertion( "BM:Me-Gr") AnnotationAssertion( "DHBA:12592") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37593") AnnotationAssertion( "EV:0100280") AnnotationAssertion( "FMA:72602") AnnotationAssertion( "HBA:9554") AnnotationAssertion( "MA:0001038") AnnotationAssertion( "MBA:1039") AnnotationAssertion(Annotation( "BIRNLEX:2643") "UMLS:C0228546") AnnotationAssertion(Annotation( "BIRNLEX:2643") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=766") AnnotationAssertion( "Goll's nucleus") AnnotationAssertion(Annotation( "BIRNLEX:2643") "golls nucleus") AnnotationAssertion(Annotation( "BIRNLEX:2643") "nucleus gracilis") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:766") "gracile nucleus (Goll)") AnnotationAssertion(Annotation( "NeuroNames:766") "gracile nucleus of the medulla") AnnotationAssertion(Annotation( "NeuroNames:766") "gracile nucleus, general") AnnotationAssertion(Annotation( "BAMS:GR") "gracile nucleus, principal part") AnnotationAssertion(Annotation( ) Annotation( ) "nucleus gracilis") AnnotationAssertion( "UBERON:0002161") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "gracile nucleus") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/d/df/Gray688.png"^^xsd:anyURI) SubClassOf(Annotation( "ABA"^^xsd:string) Annotation( "ISBN:978-1-4615-0037-7") Annotation( "WP"^^xsd:string) ) # Class: (area postrema) AnnotationAssertion(Annotation( ) Annotation( "MESH:A08.186.211.132.810.406.286") "A small, rounded eminence on each side of the fourth ventricle, which receives nerve fibers from the solitary nucleus , spinal cord, and adjacent areas of the medulla. The area postrema lies outside the blood-brain barrier and its functions include acting as an emetic chemoreceptor.") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0005146") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "An area of medulla oblongata, outside the blood-brain barrier. The apical terminals of the neurons are, in a strategic location either to monitor the chemical constitution of the plasma or to release neurogenic substances into the general circulation. Ma 1997.[TAO]") AnnotationAssertion(Annotation( "WP"^^xsd:string) "vomiting center in humans") AnnotationAssertion(Annotation( "BIRNLEX:2636") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "AP") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:AP") AnnotationAssertion( "BIRNLEX:2636") AnnotationAssertion( "BTO:0003425") AnnotationAssertion( "DHBA:12807") AnnotationAssertion( "EMAPA:35143") AnnotationAssertion( "FMA:72607") AnnotationAssertion( "GAID:591") AnnotationAssertion( "HBA:9522") AnnotationAssertion( "MA:0001034") AnnotationAssertion( "MBA:207") AnnotationAssertion( "MESH:D031608") AnnotationAssertion( "TAO:0005146") AnnotationAssertion(Annotation( "BIRNLEX:2636") "UMLS:C0228530") AnnotationAssertion(Annotation( "BIRNLEX:2636") "UMLS:C1289468") AnnotationAssertion( "ZFA:0005146") AnnotationAssertion(Annotation( "BIRNLEX:2636") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=772") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:772") "chemoreceptor trigger zone") AnnotationAssertion( "UBERON:0002162") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "area postrema") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/7/77/Gray709.png"^^xsd:anyURI) SubClassOf(Annotation( "MA"^^xsd:string) ) SubClassOf( ) SubClassOf(Annotation( "MA"^^xsd:string) Annotation( "ZFA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (inferior cerebellar peduncle) AnnotationAssertion(Annotation( "BIRNLEX:1691") "Regional part of medullary white matter (according to Neuronames) primarily found at the level of the open medulla, consisting of a large bundle of fibers projecting to and projecting from the cerebellum. The icp is continuous with the dorsal spinocerebellar tract and also contains a large number of fibers originating in the inferior olivary complex (MM).") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:icp") AnnotationAssertion( "BIRNLEX:1691") AnnotationAssertion( "BM:RB") AnnotationAssertion( "DHBA:12741") AnnotationAssertion( "DMBA:17772") AnnotationAssertion( "FMA:72615") AnnotationAssertion( "HBA:9291") AnnotationAssertion( "MA:0002744") AnnotationAssertion( "MBA:1123") AnnotationAssertion( "NIFSTD_RETIRED:birnlex_1645") AnnotationAssertion(Annotation( "BIRNLEX:1691") "UMLS:C0152393") AnnotationAssertion(Annotation( "BIRNLEX:1691") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=781") AnnotationAssertion(Annotation( "FMA:72615") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "corpus restiforme") AnnotationAssertion(Annotation( "BIRNLEX:1691") "restiform body") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:781") Annotation( ) "crus cerebelli ad medullam oblongatam") AnnotationAssertion(Annotation( "NeuroNames:781") Annotation( ) "crus medullo-cerebellare") AnnotationAssertion(Annotation( "NeuroNames:781") "inferior cerebellar peduncle (Ridley)") AnnotationAssertion(Annotation( "BAMS:icp") "inferior cerebellar peduncle (restiform body)") AnnotationAssertion(Annotation( ) "inferior peduncle") AnnotationAssertion(Annotation( "NeuroNames:781") Annotation( ) "pedunculus cerebellaris caudalis") AnnotationAssertion(Annotation( ) Annotation( ) "pedunculus cerebellaris inferior") AnnotationAssertion( "UBERON:0002163") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "inferior cerebellar peduncle") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/f/fc/Gray677.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) # Class: (tectobulbar tract) AnnotationAssertion(Annotation( "GO:0034429") "A long process of a CNS neuron, that carries efferent (outgoing) action potentials from the cell body in the optic tectum towards target cells in the premotor reticulospinal system in the hindbrain.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:tb") AnnotationAssertion( "BIRNLEX:750") AnnotationAssertion( "DHBA:12791") AnnotationAssertion( "FMA:72645") AnnotationAssertion( "TAO:0000446") AnnotationAssertion(Annotation( "BIRNLEX:750") "UMLS:C0152378") AnnotationAssertion( "ZFA:0000446") AnnotationAssertion(Annotation( "BIRNLEX:750") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=811") AnnotationAssertion( "tecto-bulbar tract") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:811") Annotation( ) "tractus tectobulbaris") AnnotationAssertion( "UBERON:0002164") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "tectobulbar tract") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (endocardium) AnnotationAssertion(Annotation( "GO:0003157") "The endocardium is an anatomical structure comprised of an endothelium and an extracellular matrix that forms the innermost layer of tissue of the heart, and lines the heart chambers[GO].") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0001320") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "Layer that lines the lumen of the heart.[TAO]") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0010408") Annotation( "AAO"^^xsd:string) Annotation( "AAO:BJB"^^xsd:string) "Part of the heart comprised of thin serous membrane, composed of endothelial tissue, that lines the interior of the heart.[AAO]") AnnotationAssertion(Annotation( "FMA:7280") "Tunica intima which has as its parts the endothelium of endocardium and the fibroelastic connective tissue that surrounds the cavity of a cardiac chamber.") AnnotationAssertion( "UBERON:0006225") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010408") AnnotationAssertion( "BTO:0000387") AnnotationAssertion( "CALOHA:TS-2075") AnnotationAssertion( "EFO:0000821") AnnotationAssertion( "EHDAA2:0004153") AnnotationAssertion( "EMAPA:17868") AnnotationAssertion( "EMAPA:32686") AnnotationAssertion( "EV:0100021") AnnotationAssertion( "FMA:7280") AnnotationAssertion( "GAID:550") AnnotationAssertion( "MA:0000076") AnnotationAssertion( "MAT:0000455") AnnotationAssertion( "MESH:D004699") AnnotationAssertion( "NCIT:C13004") AnnotationAssertion( "OpenCyc:Mx4rsWA75K1cEduAAADggVaqvw") AnnotationAssertion( "TAO:0001320") AnnotationAssertion(Annotation( "ncithesaurus:Endocardium") "UMLS:C0014124") AnnotationAssertion( "VHOG:0000084") AnnotationAssertion( "XAO:0000066") AnnotationAssertion( "ZFA:0001320") AnnotationAssertion( "galen:Endocardium") AnnotationAssertion(Annotation( "EMAPA:32686") "endocardial lining") AnnotationAssertion(Annotation( "EMAPA:17868") "endocardial tissue") AnnotationAssertion( "heart endocardium") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "VHOG:0000084") "heart endocardial tissue") AnnotationAssertion( "UBERON:0002165") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "fixed in GO to reflect FMA. See email to David/Varsha June 18 2010") AnnotationAssertion(rdfs:label "endocardium") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/6/6c/Gray493.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "Bgee:AN"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (endocardium of atrium) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Endocardium that is part of the atrium.") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:32745") AnnotationAssertion( "FMA:7284") AnnotationAssertion( "MA:0000077") AnnotationAssertion( "TAO:0002169") AnnotationAssertion( "VHOG:0000606") AnnotationAssertion( "ZFA:0001614") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "Cardiac atria endocardium") AnnotationAssertion( "atrial endocardium") AnnotationAssertion( "atrium endocardium") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "atrium of heart endocardium") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "cardiac atrium endocardium") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "endocardium of Cardiac atria") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "endocardium of atrium of heart") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "endocardium of cardiac atrium") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "endocardium of heart atrium") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "heart atrium endocardium") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "VHOG:0000606") "atrium endocardial tissue") AnnotationAssertion( "UBERON:0002166") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "endocardium of atrium") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (right lung) AnnotationAssertion(Annotation( ) Annotation( "FMA:FMA"^^xsd:string) "Lung which consists of the right upper lobe, middle lobe and right lower lobe.[FMA].") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000301") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0198566694 Schmidt-Rhaesa A, The evolution of organ systems (2007) p.210") "Lungs had already developed as paired ventral pockets from the intestine in the ancestor of Osteognathostomata.[well established][VHOG]") AnnotationAssertion( "https://github.com/obophenotype/uberon/wiki/Modeling-paired-structures-Design-Pattern"^^xsd:anyURI) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0001730") AnnotationAssertion( "EHDAA:4969") AnnotationAssertion( "EMAPA:17661") AnnotationAssertion( "FMA:7309") AnnotationAssertion( "MA:0000426") AnnotationAssertion( "NCIT:C33483") AnnotationAssertion( "OpenCyc:Mx8Ngh4rvgHsHZwpEbGdrcN5Y29ycB4rvVjKy5wpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Right_Lung") "UMLS:C0225706") AnnotationAssertion( "VHOG:0000301") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002167") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "right lung") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/3/32/Gray972.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (left lung) AnnotationAssertion(Annotation( ) Annotation( "FMA:FMA"^^xsd:string) "Lung which consists of the left upper lobe and left lower lobe.[FMA].") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000618") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0198566694 Schmidt-Rhaesa A, The evolution of organ systems (2007) p.210") "Lungs had already developed as paired ventral pockets from the intestine in the ancestor of Osteognathostomata.[well established][VHOG]") AnnotationAssertion( "https://github.com/obophenotype/uberon/wiki/Modeling-paired-structures-Design-Pattern"^^xsd:anyURI) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0000943") AnnotationAssertion( "EHDAA:4947") AnnotationAssertion( "EMAPA:17653") AnnotationAssertion( "FMA:7310") AnnotationAssertion( "MA:0000425") AnnotationAssertion( "NCIT:C32967") AnnotationAssertion( "OpenCyc:Mx8Ngh4rvgIFoJwpEbGdrcN5Y29ycB4rvVjKy5wpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Left_Lung") "UMLS:C0225730") AnnotationAssertion( "VHOG:0000618") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002168") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "left lung") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/d/dd/Gray973.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (alveolar sac) AnnotationAssertion(Annotation( ) Annotation( "MP:0010902") "The small terminal dilation of the alveolar ducts around which the alveoli form pocket-like clusters.") AnnotationAssertion( "UBERON:0008871") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0000061") AnnotationAssertion( "EMAPA:35119") AnnotationAssertion( "FMA:7317") AnnotationAssertion( "MA:0000418") AnnotationAssertion( "NCIT:C32057") AnnotationAssertion( "OpenCyc:Mx4rwCvh75wpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Alveolar_Sac") "UMLS:C0225691") AnnotationAssertion(Annotation( "MP:0010902") "pulmonary alveolar sac") AnnotationAssertion(Annotation( "FMA:7317") "sacculus alveolaris") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "MP:0010902") "air sac") AnnotationAssertion( "UBERON:0002169") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "alveolar sac") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "MA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (upper lobe of right lung) AnnotationAssertion(Annotation( ) "The lobe of the right lung that is closest to the head.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0001747") AnnotationAssertion( "EHDAA:4987") AnnotationAssertion( "EMAPA:17991") AnnotationAssertion( "FMA:7333") AnnotationAssertion( "MA:0000429") AnnotationAssertion( "NCIT:C33023") AnnotationAssertion(Annotation( "ncithesaurus:Upper_Lobe_of_the_Right_Lung") "UMLS:C1261074") AnnotationAssertion( "VHOG:0000859") AnnotationAssertion( "galen:UpperLobeOfRightLung") AnnotationAssertion(Annotation( "FMA:7333") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "lobus superior (pulmo dexter)") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) Annotation( ) "lobus superior pulmonis dextri") AnnotationAssertion( "right cranial lobe of lung") AnnotationAssertion(Annotation( "MA:0000429") "right lung cranial lobe") AnnotationAssertion(Annotation( "FMA:7333") "right upper lobe") AnnotationAssertion(Annotation( "FMA:7333") "right upper lobe of lung") AnnotationAssertion(Annotation( "FMA:7333") "superior lobe of right lung") AnnotationAssertion(Annotation( "galen:UpperLobeOfRightLung") "upper lobe of right lung") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "MA:0000429") "right lung superior lobe") AnnotationAssertion( "UBERON:0002170") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "upper lobe of right lung") SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lower lobe of right lung) AnnotationAssertion(Annotation( ) "The lobe of the right lung that is furtherst from the head.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0001740") AnnotationAssertion( "EHDAA:4979") AnnotationAssertion( "EMAPA:17986") AnnotationAssertion( "FMA:7337") AnnotationAssertion( "MA:0000428") AnnotationAssertion( "NCIT:C33022") AnnotationAssertion(Annotation( "ncithesaurus:Lower_Lobe_of_the_Right_Lung") "UMLS:C1261075") AnnotationAssertion( "VHOG:0000857") AnnotationAssertion( "galen:LowerLobeOfRightLung") AnnotationAssertion(Annotation( "FMA:7337") "inferior lobe of right lung") AnnotationAssertion(Annotation( "FMA:7337") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "lobus inferior (pulmo dexter)") AnnotationAssertion(Annotation( "FMA:7337") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "lobus inferior pulmonis dextri") AnnotationAssertion(Annotation( "galen:LowerLobeOfRightLung") "lower lobe of right lung") AnnotationAssertion( "right caudal lobe of lung") AnnotationAssertion(Annotation( "FMA:7337") "right lower lobe") AnnotationAssertion(Annotation( "FMA:7337") "right lower lobe of lung") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "MA:0000428") "right lung caudal lobe") AnnotationAssertion(Annotation( "MA:0000428") "right lung inferior lobe") AnnotationAssertion( "UBERON:0002171") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "lower lobe of right lung") SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (alveolar atrium) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37390") AnnotationAssertion( "FMA:7340") AnnotationAssertion( "MA:0000419") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "alveolus of lung atrium") AnnotationAssertion( "atrium alveolare") AnnotationAssertion( "atrium of alveolus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "atrium of alveolus of lung") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "atrium of lung alveolus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "lung alveolus atrium") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002172") AnnotationAssertion(rdfs:label "alveolar atrium") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pulmonary alveolar duct) AnnotationAssertion(Annotation( "ISBN:0-683-40008-8"^^xsd:string) Annotation( "MGI:cwg"^^xsd:string) Annotation( "MP:0002271") "The respiratory conducting tubes distal to the respiratory bronchiole that lead to the alveolar sacs and the alveoli.") AnnotationAssertion( "In human anatomy, respiratory bronchioles exists proximal to the alveolar ducts. The epithelial lining consists of smooth muscle knobs covered by nonciliated, simple cuboidal cells. The smooth muscle constricts under parasympathetic innervation and relax under sympathetic innervation") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:32694") AnnotationAssertion( "FMA:7341") AnnotationAssertion( "MA:0000417") AnnotationAssertion( "NCIT:C32056") AnnotationAssertion( "OpenCyc:Mx4rvXmfV5wpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Alveolar_Duct") "UMLS:C0391892") AnnotationAssertion(Annotation( "MA:0000417") "alveolar duct") AnnotationAssertion(Annotation( "FMA:7341") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "ductus alveolaris") AnnotationAssertion( "respiratory alveolar duct") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002173") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "pulmonary alveolar duct") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/8/8f/Gray975.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (middle lobe of right lung) AnnotationAssertion(Annotation( ) "In the human, the right lung is divided into three lobes (as opposed to two lobes on the left), superior, middle, and inferior, by two interlobular fissures: [WP,unvetted].") AnnotationAssertion(Annotation( "FMA:7383") "middle lobe of lung") AnnotationAssertion( "right medial lobe") AnnotationAssertion( "right middle lobe") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:17997") AnnotationAssertion( "FMA:7383") AnnotationAssertion( "MA:0000430") AnnotationAssertion( "NCIT:C12286") AnnotationAssertion(Annotation( "ncithesaurus:Middle_Lobe_of_the_Right_Lung") "UMLS:C0225757") AnnotationAssertion( "galen:MiddleLobeOfRightLung") AnnotationAssertion( "intermediate lobe of right lung") AnnotationAssertion(Annotation( "FMA:7383") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "lobus medius pulmonis dextri") AnnotationAssertion( "right lung middle lobe") AnnotationAssertion( "right lung, middle lobe") AnnotationAssertion( "right medial lobe of lung") AnnotationAssertion( "right middle lobe of lung") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002174") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "Called 'middle lobe of lung' in FMA") AnnotationAssertion(rdfs:label "middle lobe of right lung") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/3/32/Gray972.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (intermediolateral nucleus) AnnotationAssertion(Annotation( ) "The intermediolateral nucleus is a region of gray matter found in Rexed lamina VII of the spinal column. Rexed Lamina VII contains several well defined nuclei including the nucleus dorsalis, the intermediolateral cell column (lateral gray horn), and the sacral autonomic nucleus. It extends from the first thoracic through the third lumbar segment, and contains the autonomic motor neurons that give rise to the preganglionic fibers of the sympathetic system. [WP,unvetted].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:36565") AnnotationAssertion( "FMA:73915") AnnotationAssertion( "MA:0002753") AnnotationAssertion( "intermediolateral nucleus of spinal cord") AnnotationAssertion(Annotation( "FMA:73915") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "nucleus intermediolateralis medullae spinalis") AnnotationAssertion( "spinal cord intermediolateral nucleus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "nucleus intermediolateralis medullae spinalis") AnnotationAssertion( "UBERON:0002175") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "intermediolateral nucleus") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/c/c0/Medulla_spinalis_-_Substantia_grisea_-_English.svg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lateral cervical nucleus) AnnotationAssertion(Annotation( ) "A diffusely arranged nucleus located in the dorsal portions of the lateral funiculus at about cervical levels C1-C3; synaptic station for the spinocervicothalamic tract.") AnnotationAssertion( ) AnnotationAssertion( "BAMS:LCN") AnnotationAssertion( "BAMS:LatC") AnnotationAssertion( "DMBA:17691") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37633") AnnotationAssertion( "FMA:73921") AnnotationAssertion( "MA:0002755") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002176") AnnotationAssertion(rdfs:label "lateral cervical nucleus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (right main bronchus) AnnotationAssertion(Annotation( ) Annotation( ) "The main bronchus on the right side.") AnnotationAssertion(Annotation( "ISBN:0123813611"^^xsd:string) "Divides into 3 lobar bronchi in humans") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37365") AnnotationAssertion( "FMA:7395") AnnotationAssertion( "MA:0001849") AnnotationAssertion( "NCIT:C33486") AnnotationAssertion( "OpenCyc:Mx8Ngh4rvgHsHZwpEbGdrcN5Y29ycB4rvoIuvJwpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Right_Main_Bronchus") "UMLS:C0225608") AnnotationAssertion( "right major bronchus") AnnotationAssertion(Annotation( ) "right primary bronchus") AnnotationAssertion(Annotation( ) "right principal bronchus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "bronchus principalis dexter") AnnotationAssertion( "right bronchus") AnnotationAssertion( "UBERON:0002177") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "right main bronchus") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/9/9f/Illu_conducting_passages.svg"^^xsd:anyURI) AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/c/c3/Illu_conducting_passages.jpg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (left main bronchus) AnnotationAssertion(Annotation( ) "The main bronchus on the left side.") AnnotationAssertion(Annotation( "ISBN:0123813611"^^xsd:string) "Divides into 2 lobar bronchi in humans") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37364") AnnotationAssertion( "FMA:7396") AnnotationAssertion( "MA:0001843") AnnotationAssertion( "NCIT:C32968") AnnotationAssertion(Annotation( "ncithesaurus:Left_Main_Bronchus") "UMLS:C0225630") AnnotationAssertion( "left major bronchus") AnnotationAssertion(Annotation( ) "left primary bronchus") AnnotationAssertion(Annotation( ) "left principal bronchus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "bronchus principalis sinister") AnnotationAssertion( "left bronchus") AnnotationAssertion( "UBERON:0002178") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "left main bronchus") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/9/9f/Illu_conducting_passages.svg"^^xsd:anyURI) AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/c/c3/Illu_conducting_passages.jpg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lateral funiculus of spinal cord) AnnotationAssertion(Annotation( ) "The lateral mass of fibers on either side of the spinal cord, between the anterolateral and posterolateral sulci.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:74000") AnnotationAssertion( "TAO:0000533") AnnotationAssertion( "ZFA:0000533") AnnotationAssertion(Annotation( "ZFA:0000533") "lateral funiculus") AnnotationAssertion( "lateral funiculus of spinal cord") AnnotationAssertion(Annotation( "FMA:74000") "lateral white column of spinal cord") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "funiculus lateralis medullae spinalis") AnnotationAssertion(Annotation( "ZFA:0000533") Annotation( ) "lateral funiculi") AnnotationAssertion( "UBERON:0002179") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "lateral funiculus of spinal cord") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/d/dc/Medulla_spinalis_-_Section_-_English.svg"^^xsd:anyURI) SubClassOf( ) # Class: (ventral funiculus of spinal cord) AnnotationAssertion(Annotation( ) "The white substance of the spinal cord lying on either side between the ventral median fissure and the ventral roots of the spinal nerves.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:74003") AnnotationAssertion( "NLX:379") AnnotationAssertion( "TAO:0000605") AnnotationAssertion( "ZFA:0000605") AnnotationAssertion( "anterior funiculus") AnnotationAssertion( "anterior funiculus of spinal cord") AnnotationAssertion(Annotation( "FMA:74003") "anterior white column of spinal cord") AnnotationAssertion(Annotation( "FMA:74003") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "funiculus anterior medullae spinalis") AnnotationAssertion(Annotation( "ZFA:0000605") "ventral funiculus") AnnotationAssertion( "ventral funiculus of spinal cord") AnnotationAssertion(Annotation( "FMA:74003") "ventral white column of spinal cord") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "ZFA:0000605") Annotation( ) "ventral funiculi") AnnotationAssertion( "UBERON:0002180") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "ventral funiculus of spinal cord") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/d/dc/Medulla_spinalis_-_Section_-_English.svg"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "FMA-abduced-lr"^^xsd:string) ObjectSomeValuesFrom( )) DisjointClasses(Annotation( "lexical"^^xsd:string) ) # Class: (substantia gelatinosa) AnnotationAssertion(Annotation( ) Annotation( "MESH:A08.186.854.610.800") "Gelatinous-appearing material in the dorsal horn of the spinal cord, consisting chiefly of Golgi type II neurons and some larger nerve cells, corresponding to Rexed lamina II.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:2674") AnnotationAssertion( "EMAPA:36510") AnnotationAssertion( "EV:0100318") AnnotationAssertion( "FMA:68863") AnnotationAssertion( "FMA:74019") AnnotationAssertion( "GAID:701") AnnotationAssertion( "MA:0001124") AnnotationAssertion( "MESH:A08.186.854.610.800") AnnotationAssertion( "NCIT:C12641") AnnotationAssertion(Annotation( "ncithesaurus:Substantia_Gelatinosa") "UMLS:C0038588") AnnotationAssertion( "central gelatinous substance of spinal cord") AnnotationAssertion(Annotation( "FMA:74019") "gelatinous substance of Rolando") AnnotationAssertion( "gelatinous substance of dorsal horn of spinal cord") AnnotationAssertion( "gelatinous substance of posterior horn of spinal cord") AnnotationAssertion(Annotation( "FMA:68863") "lamina II of gray matter of spinal cord") AnnotationAssertion(Annotation( "FMA:68863") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "lamina spinalis II") AnnotationAssertion(Annotation( "FMA:68863") "rexed lamina II") AnnotationAssertion(Annotation( "FMA:68863") "spinal lamina II") AnnotationAssertion(Annotation( "FMA:74019") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "substantia gelatinosa cornu posterioris medullae spinalis") AnnotationAssertion(Annotation( "BIRNLEX:2674") "substantia gelatinosa of spinal cord dorsal horn") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BIRNLEX:2674") "substantia gelatinosa of spinal cord posterior horn") AnnotationAssertion( "UBERON:0002181") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "substantia gelatinosa") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (main bronchus) AnnotationAssertion(Annotation( ) "One of two branches of the trachea.") AnnotationAssertion( "In humans, histologically identical to trachea.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0001044") AnnotationAssertion( "EHDAA:3072") AnnotationAssertion( "EMAPA:16849") AnnotationAssertion( "FMA:7405") AnnotationAssertion( "MA:0000438") AnnotationAssertion( "NCIT:C12284") AnnotationAssertion( "OpenCyc:Mx4rvoIuvJwpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Main_Bronchus") "UMLS:C0024496") AnnotationAssertion( "VHOG:0000370") AnnotationAssertion(Annotation( "FMA:7405") "bronchus principalis") AnnotationAssertion(Annotation( "ISBN:0123813611"^^xsd:string) "extrapulmonary bronchus") AnnotationAssertion( "mainstem bronchus") AnnotationAssertion( "major bronchus") AnnotationAssertion(Annotation( "FMA:7405") "primary bronchus") AnnotationAssertion(Annotation( "FMA:7405") "principal bronchus") AnnotationAssertion( "uberon") AnnotationAssertion( "proximal bronchus") AnnotationAssertion( "UBERON:0002182") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "main bronchus") SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lobar bronchus) AnnotationAssertion(Annotation( ) Annotation( "GO:0060482") "The lobar bronchus is the major airway within the respiratory tree that starts by division of the principal bronchi on both sides and ends at the point of its own subdivision into tertiary or segmental bronchi[GO].") AnnotationAssertion( "They have relatively large lumens that are lined by respiratory epithelium. There is a smooth muscle layer below the epithelium arranged as two ribbons of muscle that spiral in opposite directions. This smooth muscle layer contains seromucous glands. Irregularly arranged plates of hyaline cartilage surround the smooth muscle. These plates give structural support to the bronchus and maintain the patency of the lumen.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EHDAA:4955") AnnotationAssertion( "EHDAA:4963") AnnotationAssertion( "EHDAA:4977") AnnotationAssertion( "EHDAA:4985") AnnotationAssertion( "EHDAA:4993") AnnotationAssertion( "EHDAA:8175") AnnotationAssertion( "EHDAA:8187") AnnotationAssertion( "EHDAA:8203") AnnotationAssertion( "EHDAA:8213") AnnotationAssertion( "EHDAA:8225") AnnotationAssertion( "EMAPA:32696") AnnotationAssertion( "FMA:7406") AnnotationAssertion( "MA:0000437") AnnotationAssertion( "NCIT:C32998") AnnotationAssertion( "OpenCyc:Mx4rwQMLXJwpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Lobar_Bronchus") "UMLS:C0225653") AnnotationAssertion(Annotation( ) Annotation( ) "bronchi lobaris") AnnotationAssertion(Annotation( ) Annotation( "FMA:7406") "secondary bronchus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "lobar bronchi") AnnotationAssertion(Annotation( ) Annotation( ) "secondary bronchi") AnnotationAssertion( "UBERON:0002183") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "lobar bronchus") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/d/df/Illu_quiz_lung05.jpg"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (segmental bronchus) AnnotationAssertion(Annotation( ) "The tertiary bronchi (also known as the segmental bronchi) arise from the secondary bronchi. The respiratory epithelium lining their lumen is surrounded by a layer of smooth muscle. This layer is composed of two ribbons of smooth muscle that spiral in opposite directions. The smooth muscle layer is surrounded by irregular plates of hyaline cartilage which help maintain the patency of the airway. Each of the tertiary bronchi serves a specific bronchopulmonary segment. There are 10 tertiary bronchi in the right lung, and eight in the left. The tertiary bronchi get smaller and divide into primary bronchioles. [WP,unvetted].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EHDAA:7043") AnnotationAssertion( "EHDAA:7049") AnnotationAssertion( "EHDAA:7058") AnnotationAssertion( "EHDAA:7064") AnnotationAssertion( "EHDAA:7070") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37739") AnnotationAssertion( "FMA:7407") AnnotationAssertion( "MA:0000439") AnnotationAssertion( "NCIT:C33526") AnnotationAssertion( "OpenCyc:Mx4rwQGFgZwpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Segmental_Bronchus") "UMLS:C0444439") AnnotationAssertion( "VHOG:0001446") AnnotationAssertion( "tertiary bronchus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002184") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "segmental bronchus") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/d/df/Illu_quiz_lung05.jpg"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (bronchus) AnnotationAssertion(Annotation( "ISBN:0-397-51047-0") Annotation( "MESH:A04.411.125") Annotation( "MGI:cwg"^^xsd:string) Annotation( "MP:0002264") "The upper conducting airways of the lung; these airways arise from the terminus of the trachea.") AnnotationAssertion(Annotation( "Wikipedia"^^xsd:string) ) AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000262") Annotation( "VHOG"^^xsd:string) Annotation( ) "Each of the two primary divisions of the trachea leading respectively into the right and the left lung. [Dorian_AF, Elsevier's_encyclopaedic_dictionary_of_medicine, Part_B:_Anatomy_(1988)_Amsterdam_etc.:_Elsevier][VHOG]") AnnotationAssertion( "bronchial") AnnotationAssertion( "In humans, the main bronchus is histologically identical to trachea; 2ary and 3ary bronchi are not; epithelium becomes simple columnar, goblet cell number decreases, elastic fibers in lamina propria increases, distribution more uniform. Muscular layer between mucosa and submucosa appears. cartilage rings become discontinuous plates connected by fibrous connective tissue") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0001340") AnnotationAssertion( "CALOHA:TS-1229") AnnotationAssertion( "EFO:0000932") AnnotationAssertion( "EMAPA:32689") AnnotationAssertion( "EV:0100041") AnnotationAssertion( "FMA:7409") AnnotationAssertion( "GAID:346") AnnotationAssertion( "MA:0000436") AnnotationAssertion( "MAT:0000133") AnnotationAssertion( "MESH:D001980") AnnotationAssertion( "MIAA:0000133") AnnotationAssertion( "NCIT:C12683") AnnotationAssertion(Annotation( "ncithesaurus:Bronchus") "UMLS:C0006255") AnnotationAssertion( "VHOG:0000262") AnnotationAssertion( "XAO:0000121") AnnotationAssertion(Annotation( ) "bronchi") AnnotationAssertion(Annotation( "FMA:7409") "bronchial trunk") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0001340") "bronchial tissue") AnnotationAssertion( "UBERON:0002185") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "bronchus") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/1/18/Respiratory_system_complete_numbered.svg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (bronchiole) AnnotationAssertion(Annotation( "ISBN:0-397-51047-0") Annotation( "MGI:cwg"^^xsd:string) Annotation( "MP:0002267") "The conducting airway of the lungs found terminal to the bronchi; these structures contain neither cartilage nor mucous-secreting glands; the epithelium of the bronchioles becomes thinner with each branching.") AnnotationAssertion( "bronchiolar") AnnotationAssertion(Annotation( "ISBN:0123813611"^^xsd:string) "lacks submucosa and cartilage plates; they have 3 layers: mucosa, muscular layer and outer layer") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0002375") AnnotationAssertion( "CALOHA:TS-2003") AnnotationAssertion( "EHDAA:8171") AnnotationAssertion( "EHDAA:8183") AnnotationAssertion( "EHDAA:8199") AnnotationAssertion( "EHDAA:8221") AnnotationAssertion( "EMAPA:32697") AnnotationAssertion( "FMA:7410") AnnotationAssertion( "MA:0000422") AnnotationAssertion( "NCIT:C12684") AnnotationAssertion( "OpenCyc:Mx4rvl9iDpwpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Bronchiole") "UMLS:C0006270") AnnotationAssertion( "VHOG:0000675") AnnotationAssertion(Annotation( "FMA:7410") "lobular bronchiole") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "bronchioli") AnnotationAssertion(Annotation( "BTO:0002375") "bronchiolus") AnnotationAssertion( "UBERON:0002186") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "bronchiole") AnnotationAssertion( "Alveoli:diagram.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "ncit") ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (terminal bronchiole) AnnotationAssertion(Annotation( "ISBN:0-397-51047-0") Annotation( "MGI:cwg"^^xsd:string) Annotation( "MP:0002268") "The last conducting structure of non-respiratory bronchioles; after this point, the airways have alveoli in their walls.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0003223") AnnotationAssertion( "EMAPA:36282") AnnotationAssertion( "FMA:7411") AnnotationAssertion( "MA:0000424") AnnotationAssertion( "NCIT:C33754") AnnotationAssertion( "OpenCyc:Mx4rwS7IU5wpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Terminal_Bronchiole") "UMLS:C0225666") AnnotationAssertion(Annotation( ) "bronchiolus terminalis") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "bronchioli terminalis") AnnotationAssertion( "terminal bronchiole tube") AnnotationAssertion( "UBERON:0002187") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "terminal bronchiole") AnnotationAssertion( "Alveoli:diagram.png"^^xsd:anyURI) SubClassOf( ) # Class: (respiratory bronchiole) AnnotationAssertion(Annotation( ) Annotation( "ISBN:0123813611"^^xsd:string) "A bronchiole that is the first segment of the respiratory zone.") AnnotationAssertion(Annotation( "ISBN:0123813611"^^xsd:string) "mice have few or none of these structures, with the terminal bronchioles transitioning directly to the alveolary ducts") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0003222") AnnotationAssertion( "EMAPA:35729") AnnotationAssertion( "FMA:7412") AnnotationAssertion( "MA:0000423") AnnotationAssertion( "NCIT:C33465") AnnotationAssertion( "OpenCyc:Mx4rwS6ki5wpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Respiratory_Bronchiole") "UMLS:C1261270") AnnotationAssertion(Annotation( ) Annotation( ) "bronchiolus respiratorii") AnnotationAssertion(Annotation( "FMA:7412") Annotation( ) "bronchiolus respiratorius") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002188") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "respiratory bronchiole") AnnotationAssertion( "Alveoli:diagram.png"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "ISBN:0123813611"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (outer cortex of kidney) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37485") AnnotationAssertion( "FMA:74285") AnnotationAssertion( "MA:0001649") AnnotationAssertion(Annotation( "MA:0001649") "kidney outer cortex") AnnotationAssertion( "outer renal cortex") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002189") AnnotationAssertion(rdfs:label "outer cortex of kidney") SubClassOf( ) # Class: (subcutaneous adipose tissue) AnnotationAssertion(Annotation( ) "A portion of adipose tissue that is part of the hypodermis, beneath the dermis.") AnnotationAssertion(Annotation( "MP:0011156") "the superficial portion of the subcutaneous tissue which is specialized for fat storage[MP:0011156]") AnnotationAssertion( "UBERON:0008875") AnnotationAssertion(Annotation( "MP:0011156") "panniculus adiposus") AnnotationAssertion( "BTO:0004042") AnnotationAssertion( "EMAPA:35829") AnnotationAssertion( "FMA:74315") AnnotationAssertion( "MA:0000473") AnnotationAssertion(Annotation( "FMA:74315") "fatty layer of subcutaneous tissue") AnnotationAssertion(Annotation( "MP:0011156") "hypodermis fat layer") AnnotationAssertion(Annotation( "FMA:74315") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "panniculus adiposus (tela subcutanea)") AnnotationAssertion(Annotation( "FMA:74315") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "panniculus adiposus telae subcutaneae") AnnotationAssertion(Annotation( "MP:0011156") "subcutaneous fat layer") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:74315") "fatty layer of superficial fascia") AnnotationAssertion(Annotation( "BTO:0004042") "subcutaneous fat") AnnotationAssertion( "UBERON:0002190") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "subcutaneous adipose tissue") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (subiculum) AnnotationAssertion(Annotation( "BIRNLEX:1305") "Part of the hippocampal formation that is bounded by the entorhinal cortex and area CA1. It is characterized on the CA1 border by an abrupt widening of the pyramidal cell layer. A molecular layer is present that is continuous with that of CA1, although the stratum radiatum is no longer present. The stratum oriens is also not present. adapted from Paxinos, G. The rat central nervous system, 2nd ed, Academic Press, San Diego, 1995, pg. 468).") AnnotationAssertion( "subicular") AnnotationAssertion( "The pyramidal neurons in the subiculum exhibit transitions between two modes of action potential output: bursting and single spiking. The transitions between these two modes is thought to be important for routing information out of the hippocampus. It is the site responsible for ictal activity in some cases of human epilepsy. It has also been implicated in working memory and drug addiction.[Wikipedia:Subiculum]") AnnotationAssertion(Annotation( "ABA") "In ABA SUB is part of the retrohippocampal region, along with the entorhinal area. this is in the hippocampal formation but not the hippocampal region") AnnotationAssertion( "in DHBA subicular cortex is divided into subiculum, prosubiculum and supracallosal subiculum") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:S") AnnotationAssertion( "BAMS:SUB") AnnotationAssertion( "BIRNLEX:1305") AnnotationAssertion( "BM:Tel-Cx-SB") AnnotationAssertion( "BTO:0003087") AnnotationAssertion( "DHBA:10301") AnnotationAssertion( "DHBA:10302") AnnotationAssertion( "DMBA:16163") AnnotationAssertion( "EMAPA:35832") AnnotationAssertion( "FMA:74414") AnnotationAssertion( "HBA:12896") AnnotationAssertion( "MA:0000960") AnnotationAssertion( "MBA:502") AnnotationAssertion( "NCIT:C33648") AnnotationAssertion( "PBA:10054") AnnotationAssertion( "PBA:128012354") AnnotationAssertion(Annotation( "ncithesaurus:Subiculum") "UMLS:C0152316") AnnotationAssertion(Annotation( "BIRNLEX:1305") "subicular cortex") AnnotationAssertion(Annotation( "FMA:74414") "subiculum hippocampi") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0003087") "gyrus parahippocampalis") AnnotationAssertion(Annotation( "BTO:0003087") "subiculum cornu ammonis") AnnotationAssertion( "UBERON:0002191") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "subiculum") AnnotationAssertion( "Hippocampus:(brain).jpg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "NIFSTD"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (ventricular system choroidal fissure) AnnotationAssertion(Annotation( "ISBN:0815318960") Annotation( "ZFA:0001075") "The narrow cleft along the medial wall of the lateral ventricle along the margins of which the choroid plexus is attached; it lies between the upper surface of the thalamus and lateral edge of the fornix in the central part of the ventricle and between the terminal stria and fimbria hippocampi in the inferior horn[ZFA].") AnnotationAssertion( "relate to lateral ventricle?") AnnotationAssertion( "not to be confused with optic fissure. the choroidal fissure is a subarachnoid space (via subarachnoid fissure in FMA)") AnnotationAssertion(Annotation( "FMA"^^xsd:string) "Most ontologies appear to have switched to using less confusing primary terms for optic and choroidal fissues. Still need to check FMA - two possible terms? CARO - is this a groove or a space or a line?") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:chf") AnnotationAssertion( "BAMS:chfl") AnnotationAssertion( "DHBA:12094") AnnotationAssertion( "EHDAA2:0000250") AnnotationAssertion( "EHDAA:7567") AnnotationAssertion( "EMAPA:17548") AnnotationAssertion( "EMAPA:17768") AnnotationAssertion( "FMA:74512") AnnotationAssertion( "FMA:83715") AnnotationAssertion( "MBA:116") AnnotationAssertion( "NCIT:C32311") AnnotationAssertion( "TAO:0001075") AnnotationAssertion(Annotation( "ncithesaurus:Choroidal_Fissure") "UMLS:C0262212") AnnotationAssertion( "VHOG:0001756") AnnotationAssertion( "ZFA:0001075") AnnotationAssertion(Annotation( "FMA:83715") "choroidal fissure of lateral ventricle") AnnotationAssertion(Annotation( "EHDAA2:0000250") "lateral ventricle choroid fissure") AnnotationAssertion(Annotation( "VHOG:0001756") "ventricular system choroid fissure") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:74512") "chorioid fissure") AnnotationAssertion(Annotation( "FMA:74512") "chorioidal fissure") AnnotationAssertion(Annotation( "FMA:74512") Annotation( "TAO:0001075") Annotation( ) "choroid fissure") AnnotationAssertion(Annotation( "EHDAA2:0000250") "choroid invagination") AnnotationAssertion(Annotation( "FMA:74512") "choroidal fissure") AnnotationAssertion(Annotation( "ZFA:0001075") Annotation( ) "choroidal fissures") AnnotationAssertion( "UBERON:0002192") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "ventricular system choroidal fissure") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses( ) # Class: (hemolymphoid system) AnnotationAssertion(Annotation( ) "Anatomical cluster consisting of the hematopoietic system and the lymphoid system, or its analogs.") AnnotationAssertion( "CALOHA:TS-2018") AnnotationAssertion( "EHDAA2:0004615") AnnotationAssertion( "EMAPA:18765") AnnotationAssertion( "FMA:74562") AnnotationAssertion( "MA:0000013") AnnotationAssertion( "hematolymphoid system") AnnotationAssertion( "lymphomyeloid complex") AnnotationAssertion( "uberon") AnnotationAssertion( "haemolymphoid system") AnnotationAssertion( "UBERON:0002193") AnnotationAssertion(rdfs:label "hemolymphoid system") SubClassOf(Annotation( "MA"^^xsd:string) ) # Class: (capsule of lymph node) AnnotationAssertion(Annotation( ) "Capsule surrounding lymph node composed of connective tissue with some plain muscle fibers.") AnnotationAssertion( "from its internal surface are given off a number of membranous processes or trabeculae, consisting, in man, of connective tissue, with a small admixture of plain muscle fibers; but in many of the lower animals composed almost entirely of involuntary muscle[WP]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:35524") AnnotationAssertion( "FMA:74604") AnnotationAssertion( "MA:0000739") AnnotationAssertion( "NCIT:C33028") AnnotationAssertion(Annotation( "ncithesaurus:Lymph_Node_Capsule") "UMLS:C0229699") AnnotationAssertion(Annotation( "FMA:74604") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "capsula nodi lymphoidei") AnnotationAssertion( "lymph node capsule") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002194") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "capsule of lymph node") AnnotationAssertion( "Lymphknoten:(Schwein).jpg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (trabecula of lymph node) AnnotationAssertion(Annotation( ) "Membranous process coming from capsule of lymph node[WP].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:74605") AnnotationAssertion( "MA:0000746") AnnotationAssertion( "NCIT:C33035") AnnotationAssertion(Annotation( "ncithesaurus:Lymph_Node_Trabecula") "UMLS:C1184179") AnnotationAssertion( "lymph node trabecula") AnnotationAssertion( "lymph node trabeculum") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002195") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "trabecula of lymph node") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/b/b3/Gray598.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (adenohypophysis) AnnotationAssertion(Annotation( ) Annotation( "ZFIN:curator"^^xsd:string) "The glandular, anterior lobe of the pituitary gland. The anterior pituitary regulates several physiological processes including stress, growth, and reproduction[WP]. The anterior lobe of the hypophysis (pituitary gland). This lobe contains cells that produce prolactin, growth hormone, thyroid-stimulating hormone, follicle-stimulating hormone and proopiomelanocortin[ZFA].") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0010540") Annotation( "AAO"^^xsd:string) Annotation( "AAO:BJB"^^xsd:string) "Region of the pituitary gland derived from the buccal protrusion consisting of three regions.[AAO]") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0001282") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "The anterior lobe of the hypophysis (pituitary gland). This lobe contains cells that produce prolactin, growth hormone, thyroid-stimulating hormone, follicle-stimulating hormone and proopiomelanocortin. In contrast to mamalian vertebrates, the adenohypophysis remains in a subepithelial position and there exists no equivalent of Rathke's pouch in zebrafish. Herzog et al, 2004.[TAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000141") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0030223693 Liem KF, Bemis WE, Walker WF, Grande L, Functional Anatomy of the Vertebrates: An Evolutionary Perspective (2001) p.510 and Figure 15-5") "It (the hypophysis) develops embryonically in all vertebrates from two ectodermal evaginations that meet and unite. An infundibulum grows ventrally from the diencephalon of the brain, and Rathke's pouch extends dorsally from the roof of the developing mouth, or stomodaeum. The infundibulum remains connected to the floor of the diencephalon, which becomes the hypothalamus, and gives rise to the part of the gland known as the neurohypophysis. (...) Rathke's pouch loses its connection with the stomodaeum in most adult vertebrates and gives rise to the rest of the gland, the adenohypophysis. (...) A well-developed hypophyseal system with functional connections to the hypothalamus is unique to craniates.[well established][VHOG]") AnnotationAssertion(Annotation( "ZFA"^^xsd:string) "In contrast to mammalian vertebrates, the adenohypophysis remains in a subepithelial position and there exists no equivalent of Rathke's pouch in zebrafish") AnnotationAssertion( "While in most basal fish and tetrapods the adenohypophyseal anlagen invaginates to form Rathke's pouch, in teleost fish the adenohypophyseal placode does not invaginate but rather maintains its initial organization forming a solid structure in the head[NCBIBook:NBK53175].") AnnotationAssertion(Annotation( "BIRNLEX:1581") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "AHP") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010540") AnnotationAssertion( "BAMS:AHY") AnnotationAssertion( "BAMS:AL") AnnotationAssertion( "BAMS:APit") AnnotationAssertion( "BIRNLEX:1581") AnnotationAssertion( "BM:AHy") AnnotationAssertion( "BTO:0000040") AnnotationAssertion( "CALOHA:TS-0794") AnnotationAssertion( "EFO:0000230") AnnotationAssertion( "EHDAA2:0000109") AnnotationAssertion( "EMAPA:17514") AnnotationAssertion( "FMA:74627") AnnotationAssertion( "MA:0000177") AnnotationAssertion( "MESH:A06.407.747.608") AnnotationAssertion( "NCIT:C12772") AnnotationAssertion( "TAO:0001282") AnnotationAssertion(Annotation( "BIRNLEX:1581") "UMLS:C0032008") AnnotationAssertion(Annotation( "ncithesaurus:Anterior_Lobe_of_the_Pituitary_Gland") "UMLS:C0032008") AnnotationAssertion(Annotation( "BIRNLEX:1581") "UMLS:C1280369") AnnotationAssertion( "VHOG:0000141") AnnotationAssertion( "ZFA:0001282") AnnotationAssertion(Annotation( "BIRNLEX:1581") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=407") AnnotationAssertion(Annotation( "ZFA:0001282") "anterior hypophysis") AnnotationAssertion( "anterior lobe (hypophysis)") AnnotationAssertion( "anterior lobe of hypophysis") AnnotationAssertion( "anterior lobe of pituitary") AnnotationAssertion( "anterior lobe of pituitary gland") AnnotationAssertion( "anterior pituitary") AnnotationAssertion(Annotation( "FMA:74627") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "lobus anterior (glandula pituitaria)") AnnotationAssertion(Annotation( "FMA:74627") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "lobus anterior hypophysis") AnnotationAssertion( "pituitary gland, anterior lobe") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BAMS:APit") "anterior lobe of the pituitary") AnnotationAssertion(Annotation( "BTO:0000040") "anterior pituitary gland") AnnotationAssertion(Annotation( "BTO:0000496") "cranial lobe") AnnotationAssertion(Annotation( "NeuroNames:407") Annotation( ) "lobus anterior") AnnotationAssertion(Annotation( "EMAPA:17514") "pituitary anterior lobe") AnnotationAssertion(Annotation( "BAMS:AL") "pituitary glandanterior lobe") AnnotationAssertion(Annotation( "BTO:0000496") "rostral lobe") AnnotationAssertion( "UBERON:0002196") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "adenohypophysis") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/f/fb/Gray1181.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "ZFA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "ZFA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "NCBIBook:NBK53175"^^xsd:string) Annotation( "ZFA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses(Annotation( "lexical"^^xsd:string) ) # Class: (median eminence of neurohypophysis) AnnotationAssertion(Annotation( "BIRNLEX:925") "Elevation on the ventral surface of the brain located at the zone of attachment between the hypothalamic floor and the hypophysis (Butler and Hodos, Comparative Vertebrate Neuroanatomy, 2nd ed., 2005, pg. 446).") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0010539") Annotation( "AAO"^^xsd:string) Annotation( "AAO:BJB"^^xsd:string) "Region of the neurohypophysis.[AAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001179") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0030223693 Liem KF, Bemis WE, Walker WF, Grande L, Functional Anatomy of the Vertebrates: An Evolutionary Perspective (2001) p.510 and Figure 15-5") "It (the hypophysis) develops embryonically in all vertebrates from two ectodermal evaginations that meet and unite. An infundibulum grows ventrally from the diencephalon of the brain, and Rathke's pouch extends dorsally from the roof of the developing mouth, or stomodaeum. The infundibulum remains connected to the floor of the diencephalon, which becomes the hypothalamus, and gives rise to the part of the gland known as the neurohypophysis. (...) Rathke's pouch loses its connection with the stomodaeum in most adult vertebrates and gives rise to the rest of the gland, the adenohypophysis. (...) A well-developed hypophyseal system with functional connections to the hypothalamus is unique to craniates.[well established][VHOG]") AnnotationAssertion(Annotation( "BIRNLEX:925") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "ME") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010539") AnnotationAssertion( "BAMS:ME") AnnotationAssertion( "BIRNLEX:925") AnnotationAssertion( "BM:ME") AnnotationAssertion( "BTO:0001954") AnnotationAssertion( "DHBA:13338") AnnotationAssertion( "DMBA:15689") AnnotationAssertion( "EHDAA2:0001080") AnnotationAssertion( "EHDAA:7540") AnnotationAssertion( "EMAPA:17521") AnnotationAssertion( "FMA:74634") AnnotationAssertion( "GAID:463") AnnotationAssertion( "HBA:12916") AnnotationAssertion( "MA:0000859") AnnotationAssertion( "MBA:10671") AnnotationAssertion( "MESH:A06.407.747.734.500") AnnotationAssertion(Annotation( "BIRNLEX:925") "UMLS:C0025056") AnnotationAssertion( "VHOG:0001179") AnnotationAssertion(Annotation( "BIRNLEX:925") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=402") AnnotationAssertion(Annotation( "FMA:74634") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "eminentia mediana hypothalami") AnnotationAssertion( "median eminence") AnnotationAssertion( "median eminence of hypothalamus") AnnotationAssertion( "median eminence of posterior lobe of pituitary gland") AnnotationAssertion( "median eminence of tuber cinereum") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:402") Annotation( ) "eminentia medialis (Shantha)") AnnotationAssertion(Annotation( "NeuroNames:402") Annotation( ) "eminentia mediana") AnnotationAssertion(Annotation( ) Annotation( ) "eminentia mediana hypothalami") AnnotationAssertion(Annotation( "NeuroNames:402") Annotation( ) "eminentia postinfundibularis") AnnotationAssertion(Annotation( "NeuroNames:402") "medial eminence") AnnotationAssertion( "UBERON:0002197") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "median eminence of neurohypophysis") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/8/8c/HypothalamicNuclei.PNG"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (neurohypophysis) AnnotationAssertion(Annotation( "MP:0004164") "The posterior part of the pituitary gland that secretes hormones involved in blood pressure regulation such as oxytocin and antidiuretic hormon.") AnnotationAssertion(Annotation( ) "request magnocellular cell from CL. Request oxytocin secretion from GO. Notes: 'The hypophysis or pituitary gland is derived, in part from an ectodermal outpocketing of the stomodeum (Rathke's Pouch) and in part from the floor of the diencephalon'") AnnotationAssertion(Annotation( "Ariens, p. 1192") ) AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0010537") Annotation( "AAO"^^xsd:string) Annotation( "AAO:BJB"^^xsd:string) "The infundibular part of the pituitary gland consisting of two regions.[AAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000142") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0030223693 Liem KF, Bemis WE, Walker WF, Grande L, Functional Anatomy of the Vertebrates: An Evolutionary Perspective (2001) p.510 and Figure 15-5") "It (the hypophysis) develops embryonically in all vertebrates from two ectodermal evaginations that meet and unite. An infundibulum grows ventrally from the diencephalon of the brain, and Rathke's pouch extends dorsally from the roof of the developing mouth, or stomodaeum. The infundibulum remains connected to the floor of the diencephalon, which becomes the hypothalamus, and gives rise to the part of the gland known as the neurohypophysis. (...) Rathke's pouch loses its connection with the stomodaeum in most adult vertebrates and gives rise to the rest of the gland, the adenohypophysis. (...) A well-developed hypophyseal system with functional connections to the hypothalamus is unique to craniates.[well established][VHOG]") AnnotationAssertion(Annotation( "EMAPA"^^xsd:string) "todo - resolve EMAPA and EHDAA2 models, include future neurohypophysis (TS15-19)? relationship to infundibular recess of 3rd ventricle (TS15-19)") AnnotationAssertion(Annotation( "BIRNLEX:1586") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "NHP") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010537") AnnotationAssertion( "BAMS:NHP") AnnotationAssertion( "BAMS:NHY") AnnotationAssertion( "BAMS:NL") AnnotationAssertion( "BAMS:PPit") AnnotationAssertion( "BIRNLEX:1586") AnnotationAssertion( "BM:NY") AnnotationAssertion( "BTO:0000937") AnnotationAssertion( "CALOHA:TS-0815") AnnotationAssertion( "DMBA:15691") AnnotationAssertion( "EHDAA2:0001271") AnnotationAssertion( "EHDAA:7536") AnnotationAssertion( "EMAPA:17519") AnnotationAssertion( "FMA:74628") AnnotationAssertion( "MA:0000178") AnnotationAssertion( "MESH:A06.407.747.734") AnnotationAssertion( "NCIT:C12773") AnnotationAssertion( "TAO:0001271") AnnotationAssertion(Annotation( "BIRNLEX:1586") "UMLS:C0032009") AnnotationAssertion(Annotation( "ncithesaurus:Posterior_Lobe_of_the_Pituitary_Gland") "UMLS:C0032009") AnnotationAssertion(Annotation( "BIRNLEX:1586") "UMLS:C1280368") AnnotationAssertion( "VHOG:0000142") AnnotationAssertion( "ZFA:0001271") AnnotationAssertion(Annotation( "BIRNLEX:1586") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=401") AnnotationAssertion(Annotation( "FMA:74628") "infundibular process") AnnotationAssertion(Annotation( "FMA:74628") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "lobus nervosus neurohypophysis") AnnotationAssertion(Annotation( "FMA:74628") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "lobus posterior (glandula pituitaria)") AnnotationAssertion(Annotation( "FMA:74628") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "lobus posterior hypophysis") AnnotationAssertion(Annotation( "FMA:74628") "neural lobe") AnnotationAssertion(Annotation( "BIRNLEX:1586") "neural lobe of pituitary") AnnotationAssertion(Annotation( "FMA:74628") "neural lobe of pituitary gland") AnnotationAssertion( "neuro hypophysis") AnnotationAssertion( "neurohypophysis") AnnotationAssertion( "pituitary gland, posterior lobe") AnnotationAssertion( "posterior lobe of pituitary") AnnotationAssertion(Annotation( "FMA:74628") "posterior lobe of pituitary gland") AnnotationAssertion( "posterior pituitary") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:401") Annotation( ) "lobus nervosus") AnnotationAssertion(Annotation( "NeuroNames:401") Annotation( ) "lobus posterior") AnnotationAssertion(Annotation( "BAMS:NL") "pituitary gland neural lobe") AnnotationAssertion(Annotation( "NeuroNames:401") "pituitary gland, neural lobe") AnnotationAssertion(Annotation( "NeuroNames:401") "posterior lobe of hypophysis") AnnotationAssertion(Annotation( "BTO:0000937") "posterior pituitary gland") AnnotationAssertion( "UBERON:0002198") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "neurohypophysis") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/b/b9/Pituitary_gland_representation.PNG"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "MA"^^xsd:string) ) SubClassOf( ) SubClassOf(Annotation( "ZFA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (integument) AnnotationAssertion(Annotation( ) "The dermis, epidermis and hypodermis.") AnnotationAssertion( "in FMA intergument = skin+superficial fascia(hypodermis), skin=dermis+epidermis+hair_nail. Note that the definition provided here excludes the more general sense of the term 'integument' used in invertebrates; consider 'integumental system'. Note that the VSAO class appears to include adnexa by its definition.") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0000239") Annotation( "AAO"^^xsd:string) Annotation( "AAO:EJS"^^xsd:string) "Anatomical system that protects the body from damage, comprising the skin and its appendages.[AAO]") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "VSAO:0000029") Annotation( "VSAO"^^xsd:string) Annotation( "PSPUB:0000170"^^xsd:string) "Surface structure that is the outer protective covering of the body.[VSAO]") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0000368") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "The outer protective barrier that separates the animal from its aquatic environment. Le Guellec et al, 2004.[TAO]") AnnotationAssertion( "integumental") AnnotationAssertion( "integumentary") AnnotationAssertion( ) AnnotationAssertion( "AAO:0000239") AnnotationAssertion( "BTO:0000634") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37504") AnnotationAssertion( "FMA:74657") AnnotationAssertion( "TAO:0000368") AnnotationAssertion( "VSAO:0000029") AnnotationAssertion( "ZFA:0000368") AnnotationAssertion( "galen:Integument") AnnotationAssertion( "dermis plus epidermis plus hypodermis") AnnotationAssertion(Annotation( "FMA:74657") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "integumentum commune") AnnotationAssertion( "skin and subcutaneous tissue") AnnotationAssertion( "skin plus hypodermis") AnnotationAssertion(Annotation( "FMA:74657") "the integument") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0000634") "dermal system") AnnotationAssertion(Annotation( "BTO:0000634") "dermoid system") AnnotationAssertion( "skin") AnnotationAssertion(Annotation( "BTO:0000634") "tegument") AnnotationAssertion( "vertebrate integument") AnnotationAssertion( "UBERON:0002199") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "integument") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (vasculature of head) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "Vasculature that is part of a head [Automatically generated definition].") AnnotationAssertion( "EFO:0003656") AnnotationAssertion( "FMA:74710") AnnotationAssertion( "TAO:0001267") AnnotationAssertion( "XAO:0004152") AnnotationAssertion( "ZFA:0001267") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "adult head vascular network") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "adult head vasculature") AnnotationAssertion( "cranial vasculature") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "head vascular network") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "vascular network of adult head") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "vascular network of head") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "vasculature of adult head") AnnotationAssertion( "uberon") AnnotationAssertion( "head vasculature") AnnotationAssertion( "UBERON:0002200") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "vasculature of head") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (vasculature of trunk) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A vasculature that is part of a trunk [Automatically generated definition].") AnnotationAssertion( "FMA:74712") AnnotationAssertion( "TAO:0005024") AnnotationAssertion( "ZFA:0005024") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "torso vascular network") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "torso vasculature") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "trunk vascular network") AnnotationAssertion( "trunk vasculature") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "vascular network of torso") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "vascular network of trunk") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "vasculature of torso") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002201") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "vasculature of trunk") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (submucosa of trachea) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A submucosa that is part of a trachea.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0002115") AnnotationAssertion( "EMAPA:35879") AnnotationAssertion( "FMA:7472") AnnotationAssertion( "MA:0001860") AnnotationAssertion( "NCIT:C49307") AnnotationAssertion(Annotation( "ncithesaurus:Trachea_Submucosa") "UMLS:C0225586") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "submucosa of windpipe") AnnotationAssertion( "trachea submucosa") AnnotationAssertion( "tracheal submucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "windpipe submucosa") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0002115") "submucous layer of trachea") AnnotationAssertion( "UBERON:0002202") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "submucosa of trachea") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (vasculature of eye) AnnotationAssertion(Annotation( ) Annotation( "OBOL:automatic"^^xsd:string) "Vasculature that is part of the eye region.") AnnotationAssertion(Annotation( "ZFA"^^xsd:string) "not part of the eye in ZFA. Note this changed to a blood vessel in ZFA") AnnotationAssertion( ) AnnotationAssertion( "FMA:74743") AnnotationAssertion( "TAO:0007057") AnnotationAssertion( "ZFA:0007057") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "eye vascular network") AnnotationAssertion(Annotation( "ZFA:0007057") "ocular blood vessel") AnnotationAssertion( "ocular vasculature") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "vascular network of eye") AnnotationAssertion( "uberon") AnnotationAssertion( "eye vasculature") AnnotationAssertion( "optic vasculature") AnnotationAssertion( "UBERON:0002203") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "vasculature of eye") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "ISBN:0781772214") ObjectSomeValuesFrom( )) # Class: (musculoskeletal system) AnnotationAssertion(Annotation( ) Annotation( "VSAO:0000031") Annotation( "VSAO:curator"^^xsd:string) "Anatomical system that consists of the muscular and skeletal systems.") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0010546") Annotation( "AAO"^^xsd:string) Annotation( "AAO:EJS"^^xsd:string) "Anatomical system that provides locomotion and physical support to the organism.[AAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001275") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "DOI:10.1002/jez.b.21246 Shearman RM, Burke AC, The lateral somitic frontier in ontogeny and phylogeny. Journal of Experimental Zoology (2009)") "There are more than 50,000 extant vertebrate species, representing over 500 million years of evolution. During that time, the vertebrate musculoskeletal systems have adapted to aquatic, terrestrial, fossorial, and arboreal lifestyles, while simultaneously retaining functionally integrated axial and appendicular skeletal systems.[well established][VHOG]") AnnotationAssertion( "musculoskeletal") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010546") AnnotationAssertion( "CALOHA:TS-1311") AnnotationAssertion( "EMAPA:32714") AnnotationAssertion( "EV:0100139") AnnotationAssertion( "FMA:7482") AnnotationAssertion( "GAID:98") AnnotationAssertion( "MA:0002418") AnnotationAssertion( "MESH:D009141") AnnotationAssertion( "NCIT:C12754") AnnotationAssertion( "OpenCyc:Mx4rQRpVNgAKEdyHxgDggVfs8g") AnnotationAssertion(Annotation( "ncithesaurus:Musculoskeletal_System") "UMLS:C0026860") AnnotationAssertion( "VHOG:0001275") AnnotationAssertion( "VSAO:0000031") AnnotationAssertion( "XAO:0000168") AnnotationAssertion( "musculo-skeletal system") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002204") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "musculoskeletal system") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "check ctenophore") ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses( ) DisjointClasses( ) DisjointClasses( ) DisjointClasses( ) DisjointClasses( ) DisjointClasses( ) DisjointClasses( ) # Class: (manubrium of sternum) AnnotationAssertion(Annotation( ) Annotation( "MP:0012668") "The cranial most segment of the sternum. Located ventrally with a quadrangular shape, wider superiorly and narrower inferiorly, it articulates with the clavicles and the first two ribs[MP,WP].") AnnotationAssertion( "manubrium") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:18723") AnnotationAssertion( "FMA:7486") AnnotationAssertion( "GAID:247") AnnotationAssertion( "MA:0001332") AnnotationAssertion( "MESH:D008371") AnnotationAssertion( "NCIT:C52730") AnnotationAssertion( "OpenCyc:Mx4rvXOLAZwpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Sternal_Manubrium") "UMLS:C1710195") AnnotationAssertion( "manubrium of sternum") AnnotationAssertion(Annotation( "EMAPA:18723") "manubrium sterni") AnnotationAssertion(Annotation( "MA:0001332") "sternal manubrium") AnnotationAssertion( "sternal rostrum") AnnotationAssertion(Annotation( "PHENOSCAPE:ad"^^xsd:string) "sternum rostrum") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002205") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "May be cartilage in some species.") AnnotationAssertion(rdfs:label "manubrium of sternum") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/2/23/Gray116.png"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "ISBN:0073040584"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "musculoskeletal") Annotation( "ISBN:0073040584"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses( ) # Class: (mammillary body) AnnotationAssertion(Annotation( "BIRNLEX:865") "One of two hemispherical bulges on the base of the posterior hypothalamus (Butler and Hodos, Comparative Vertebrate Neuroanatomy, 2nd ed., 2005, pg 455).") AnnotationAssertion(Annotation( "Hardisty, p. 320-1") ) AnnotationAssertion(Annotation( "BIRNLEX:865") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "MMB") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:MB") AnnotationAssertion( "BAMS:MBO") AnnotationAssertion( "BAMS:mmb") AnnotationAssertion( "BIRNLEX:865") AnnotationAssertion( "DHBA:15546") AnnotationAssertion( "DMBA:15723") AnnotationAssertion( "EMAPA:35542") AnnotationAssertion( "FMA:74877") AnnotationAssertion( "GAID:652") AnnotationAssertion( "HBA:12909") AnnotationAssertion( "MA:0000174") AnnotationAssertion( "MBA:331") AnnotationAssertion( "MESH:A08.186.211.730.385.357.362.500") AnnotationAssertion( "NCIT:C33052") AnnotationAssertion( "TAO:0000334") AnnotationAssertion(Annotation( "BIRNLEX:865") "UMLS:C0024670") AnnotationAssertion(Annotation( "ncithesaurus:Mamillary_Body") "UMLS:C0024670") AnnotationAssertion(Annotation( "BIRNLEX:865") "UMLS:C1305759") AnnotationAssertion( "ZFA:0000334") AnnotationAssertion(Annotation( "BIRNLEX:865") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=412") AnnotationAssertion(Annotation( "ZFA:0000334") "corpus mamillare") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:412") Annotation( ) "corpora mamillaria") AnnotationAssertion(Annotation( "NeuroNames:412") Annotation( ) "corpora mammillaria") AnnotationAssertion(Annotation( ) Annotation( ) "corpus mamillare") AnnotationAssertion(Annotation( "NeuroNames:412") Annotation( ) "corpus mamillaris") AnnotationAssertion(Annotation( "NeuroNames:412") Annotation( ) "corpus mammillare") AnnotationAssertion(Annotation( "DMBA:Mam") "mammillary area") AnnotationAssertion( "UBERON:0002206") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "mammillary body") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/9/97/Gray1180.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "ABA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "GO definition") ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (xiphoid process) AnnotationAssertion(Annotation( ) Annotation( ) "A cartilaginous extension to the distal part of the sternum.") AnnotationAssertion(Annotation( "WP,unvetted") "this class may represent a mixed bony-cartilage element, or it may be the superclass of either purely cartilage or purely ossified elements") AnnotationAssertion( "usually ossified in the adult human. By age 15 to 29, the xiphoid usually fuses to the body of the sternum with a fibrous joint. Unlike the synovial articulation of major joints, this is non-movable. Much the way the first seven ribs articulate with the sternum, the cartilage in the celiac plexus joins on the xiphoid process, reinforcing it, and indirectly attaches the costal cartilage to the sternum.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:18725") AnnotationAssertion( "FMA:7488") AnnotationAssertion( "MA:0001334") AnnotationAssertion( "NCIT:C33895") AnnotationAssertion(Annotation( "ncithesaurus:Xiphoid_Process") "UMLS:C0043356") AnnotationAssertion(Annotation( ) "xiphisternum") AnnotationAssertion(Annotation( "FMA:7488") "xiphoid process") AnnotationAssertion( "xiphoid process of sternum") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "metasternum") AnnotationAssertion(Annotation( ) "processus xiphoideus") AnnotationAssertion(Annotation( ) Annotation( ) "processus xiphoideus") AnnotationAssertion(Annotation( ) "xiphoid") AnnotationAssertion(Annotation( ) "xiphoid process") AnnotationAssertion(Annotation( ) "xiphoideus") AnnotationAssertion(Annotation( ) "xiphosternal junction") AnnotationAssertion(Annotation( ) "xyphoid") AnnotationAssertion( "UBERON:0002207") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "xiphoid process") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/4/4d/Gray117.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "musculoskeletal") Annotation( "ISBN:0073040584"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (sternebra) AnnotationAssertion(Annotation( ) Annotation( ) "One of the bony segments of the sternum[TFD].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:18724") AnnotationAssertion( "FMA:7489") AnnotationAssertion( "MA:0001333") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "EMAPA:18724") "sternebral bone") AnnotationAssertion( "UBERON:0002208") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "Note that some definitions state that this a segment of the primordial sternum.") AnnotationAssertion(rdfs:label "sternebra") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/1/12/Illu_thoracic_cage.jpg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "MA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (fibrous joint) AnnotationAssertion(Annotation( ) Annotation( "FMA:FMA"^^xsd:string) "Nonsynovial joint in which the articulating bones or cartilages are connected by ligaments. Examples: sagittal suture, inferior tibiofibular syndesmosis, gomphosis.[FMA].") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0005156") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "A joint where fibrous tissue such as ligament connects two calcified tissues.[TAO]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AEO:0000178") AnnotationAssertion( "EHDAA2:0003178") AnnotationAssertion( "EMAPA:35344") AnnotationAssertion( "FMA:7492") AnnotationAssertion( "MA:0000321") AnnotationAssertion( "TAO:0005156") AnnotationAssertion( "ZFA:0005156") AnnotationAssertion( "articulatio fibrosa") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "junctura fibrosa") AnnotationAssertion( "UBERON:0002209") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "fibrous joint") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf(Annotation( "AEO"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (syndesmosis) AnnotationAssertion(Annotation( ) Annotation( "FMA:FMA"^^xsd:string) "Fibrous joint in which the articulating bones or cartilages of the vertebral column and the limbs as well as articulating ossicles, are connected by skeletal ligaments or membranes. Examples: Intervertebral syndesmosis, inferior tibiofibular joint.[FMA].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37465") AnnotationAssertion( "FMA:7494") AnnotationAssertion( "MA:0001500") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002210") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "syndesmosis") SubClassOf( ) SubClassOf( ) # Class: (nerve root) AnnotationAssertion(Annotation( ) Annotation( ) "A continuation of the neuron projection bundle component of a nerve inside, crossing or immediately outside the central nervous system.") AnnotationAssertion( "We consider cranial nerve roots to be primarily CNS structures, but model spinal nerve roots as PNS structures, due to the existence of ganglia on the roots.") AnnotationAssertion(Annotation( "FBbt:00007602, FBC:DOS") "The continuation of the neurite bundle and associated glia of a nerve, inside the central nervous system[FBbt:00007602, FBC:DOS].") AnnotationAssertion(Annotation( "FMA"^^xsd:string) "FMA has 'central zone of nerve' which is the superclass of cranial nerve tracts, which the FMA sometimes calls roots") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:5981") AnnotationAssertion( "FMA:82524") AnnotationAssertion( "NCIT:C54024") AnnotationAssertion( "NLX:144250") AnnotationAssertion(Annotation( "ncithesaurus:Nerve_Root") "UMLS:C0228084") AnnotationAssertion(Annotation( ) "initial segment of nerve") AnnotationAssertion(Annotation( ) "radix nervi") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002211") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "nerve root") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (macula of saccule of membranous labyrinth) AnnotationAssertion(Annotation( "MGI:anna"^^xsd:string) Annotation( "MP:0004330") "The oval neuroepithelial sensory receptor in the anterior wall of the saccule; hair cells of the neuroepithelium support the statoconial membrane and have terminal arborizations of vestibular nerve fibers around their bodies.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:35534") AnnotationAssertion( "FMA:74944") AnnotationAssertion( "MA:0001201") AnnotationAssertion( "NCIT:C33045") AnnotationAssertion( "TAO:0007000") AnnotationAssertion(Annotation( "ncithesaurus:Macula_of_Saccule") "UMLS:C0229468") AnnotationAssertion( "XAO:0004136") AnnotationAssertion( "ZFA:0007000") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "macula of membranous labyrinth saccule") AnnotationAssertion( "macula of saccule") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "macula of sacculus (labyrinthus vestibularis)") AnnotationAssertion(Annotation( "ZFA:0007000") "macula saccule") AnnotationAssertion(Annotation( "FMA:74944") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "macula sacculi") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "membranous labyrinth saccule macula") AnnotationAssertion(Annotation( "ZFA:0007000") "saccular macula") AnnotationAssertion( "saccular macula of membranous labyrinth") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "saccule macula") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "saccule of membranous labyrinth macula") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "sacculus (labyrinthus vestibularis) macula") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "macula sacculi") AnnotationAssertion( "saccular maculs") AnnotationAssertion( "UBERON:0002212") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "macula of saccule of membranous labyrinth") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (cartilaginous joint) AnnotationAssertion(Annotation( ) Annotation( "FMA:FMA"^^xsd:string) "Nonsynovial joint in which the articulating bones or cartilages are connected by cartilage. Examples: Spheno-occipital synchondrosis, first sternocostal joint, pubic symphysis.[FMA].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:36581") AnnotationAssertion( "FMA:7496") AnnotationAssertion( "MA:0000320") AnnotationAssertion( "TAO:0005155") AnnotationAssertion( "ZFA:0005155") AnnotationAssertion( "articulatio cartilaginea") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "junctura cartilaginea") AnnotationAssertion( "UBERON:0002213") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "cartilaginous joint") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (macula of utricle of membranous labyrinth) AnnotationAssertion(Annotation( "MGI:anna"^^xsd:string) Annotation( "MP:0004333") "The neuroepithelial sensory receptor in the inferolateral wall of the utricle; hair cells of the neuroepithelium support the statoconial membrane and have terminal arborizations of vestibular nerve fibers around their bodies; normally sensitive to linear acceleration in the longitudinal axis of the body and to gravitational influences.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EFO:0003474") AnnotationAssertion( "EMAPA:35535") AnnotationAssertion( "FMA:74960") AnnotationAssertion( "MA:0001203") AnnotationAssertion( "NCIT:C33046") AnnotationAssertion( "TAO:0000030") AnnotationAssertion(Annotation( "ncithesaurus:Macula_of_Utricle") "UMLS:C0229451") AnnotationAssertion( "ZFA:0000030") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "macula of membranous labyrinth utricle") AnnotationAssertion( "macula of utricle") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "macula of utriculus (labyrinthus vestibularis)") AnnotationAssertion(Annotation( "ZFA:0000030") "macula utricle") AnnotationAssertion(Annotation( "FMA:74960") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "macula utriculi") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "membranous labyrinth utricle macula") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "utricle macula") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "utricle of membranous labyrinth macula") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "utriculus (labyrinthus vestibularis) macula") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "macula utriculi") AnnotationAssertion(Annotation( "ZFA:0000030") Annotation( ) "maculae utricle") AnnotationAssertion( "utricular macula") AnnotationAssertion( "UBERON:0002214") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "macula of utricle of membranous labyrinth") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/c/cb/Bigotolith.jpg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (synchondrosis) AnnotationAssertion(Annotation( ) Annotation( "FMA:FMA"^^xsd:string) "Cartilaginous joint in which the articulating bones or cartilages are connected by hyaline cartilage. Examples: spheno-occipital synchondrosis, first sternocostal joint.[FMA].") AnnotationAssertion( "WP considers epiphyseal plates as subtypes of this") AnnotationAssertion( "consider adding link to hyaline cartilage") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:35846") AnnotationAssertion( "FMA:7497") AnnotationAssertion( "MA:0001501") AnnotationAssertion(Annotation( "FMA:7497") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "cartilago epiphysialis") AnnotationAssertion(Annotation( "FMA:7497") "primary cartilaginous joint") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:7497") "epiphysial cartilage") AnnotationAssertion( "UBERON:0002215") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "synchondrosis") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/7/76/Gray297.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses( ) # Class: (symphysis) AnnotationAssertion(Annotation( ) Annotation( "FMA:FMA"^^xsd:string) "Cartilaginous joint in which the articulating bones or cartilages are connected by fibrocartilage. Examples: pubic symphysis, intervertebral symphysis, manubriosternal joint.[FMA].") AnnotationAssertion( "consider adding fibrocartilage class") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37758") AnnotationAssertion( "FMA:7498") AnnotationAssertion( "MA:0001504") AnnotationAssertion(Annotation( "FMA:7498") "secondary cartilaginous joint") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002216") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "symphysis") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/b/b1/Gray298.png"^^xsd:anyURI) SubClassOf(Annotation( "MA"^^xsd:string) ) SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (synovial joint) AnnotationAssertion(Annotation( ) Annotation( "FMA:7501") "Joint in which the articulating bones or cartilages are connected by an articular capsule which encloses a synovial membrane and a synovial cavity. Examples: Temporomandibular joint, knee joint.[FMA].") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0005153") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:Curator") "Is a joint that is located at the point of contact of articulating bones allowing movement. The joint has a capsule containing synovial fluid surrounding the articulating bone surfaces.[TAO]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AEO:0000183") AnnotationAssertion( "CALOHA:TS-2138") AnnotationAssertion( "EHDAA2:0003183") AnnotationAssertion( "FMA:7501") AnnotationAssertion( "MA:0000322") AnnotationAssertion( "NCIT:C32461") AnnotationAssertion( "OpenCyc:Mx4rv2bBV5wpEbGdrcN5Y29ycA") AnnotationAssertion( "TAO:0005153") AnnotationAssertion( "ZFA:0005153") AnnotationAssertion( "galen:SynovialJoint") AnnotationAssertion( "articulatio synoviale") AnnotationAssertion(Annotation( "ZFA:0005153") Annotation( ) "diarthroses") AnnotationAssertion( "diarthrosis") AnnotationAssertion( "diarthrosis joint") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "ZFA:0005153") Annotation( ) "diarthrodial joints") AnnotationAssertion( "UBERON:0002217") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "synovial joint") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses( ) # Class: (tympanic ring) AnnotationAssertion(Annotation( ) Annotation( "MP:0000030") "A C-shaped membranous bone that provides physical support to the tympanic membrane. The tympanic ring develops sequentially from an initial primordium in the first branchial arch growing in a circumferential fashion around the first pharyngeal cleft into the second branchial arch (Mallo and Gridley, 1996). In most mammals, the tympanic ring exists only during embryonic life, when it coordinates proper development and positioning of the eardrum (see below), and then becomes integrated into the temporal bone[PMID].") AnnotationAssertion( "check amphibians") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0000615") Annotation( "AAO"^^xsd:string) Annotation( "AAO:LAP"^^xsd:string) "Funnel-like ring structure located lateral to the ventral ramus of the squamosal, beneath the skin; it provides support to the tympanic membrane.[AAO]") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0000615") Annotation( "AAO"^^xsd:string) "relationship loss: part_of plectral apparatus (AAO:0000443)[AAO]") AnnotationAssertion(Annotation( "AAO"^^xsd:string) "in AAO 'Funnel-like ring structure located lateral to the ventral ramus of the squamosal, beneath the skin; it provides support to the tympanic membrane'.") AnnotationAssertion(Annotation( "FMA"^^xsd:string) "in FMA, the tympanic ring is an anatomical line. Howevever http://www.ncbi.nlm.nih.gov/pubmed/11237469 states: 'the tympanic ring, which serves as support for the tympanic membrane, directs invagination of the first pharingeal cleft ectoderm to form the external acoustic meatus (EAM), which provides the outer layer of the membrane'.") AnnotationAssertion( ) AnnotationAssertion( "AAO:0000615") AnnotationAssertion( "EMAPA:19197") AnnotationAssertion( "MA:0001225") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "ectotympanic ring") AnnotationAssertion(Annotation( "EMAPA:19197") "os tympanicum") AnnotationAssertion( "tympanic annulus") AnnotationAssertion( "tympanic anulus") AnnotationAssertion( "tympanic membrane annulus") AnnotationAssertion( "UBERON:0002218") AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "Gene notes: Gsc and Prx1 are essential for tympanic ring development") AnnotationAssertion(rdfs:label "tympanic ring") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "MA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (subfornical organ) AnnotationAssertion(Annotation( ) Annotation( "NLXANAT:100314") "Group of neurons situated on the ventral surface of the fornix at the level of the foramen of Monro in the third ventricle (adapted from Wikipedia via NIF).") AnnotationAssertion( "induces drinking behavior after stimulation with angiotensin II[MESH].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:SFO") AnnotationAssertion( "DHBA:12104") AnnotationAssertion( "EMAPA:35830") AnnotationAssertion( "FMA:75260") AnnotationAssertion( "GAID:795") AnnotationAssertion( "MA:0000940") AnnotationAssertion( "MBA:338") AnnotationAssertion( "MESH:A08.713.840") AnnotationAssertion( "NLXANAT:100314") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "organum subfornicale") AnnotationAssertion( "UBERON:0002219") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "subfornical organ") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/d/d7/Gray715.png"^^xsd:anyURI) SubClassOf(Annotation( "MA"^^xsd:string) ) SubClassOf( ) SubClassOf(Annotation( "MA-modified"^^xsd:string) ObjectSomeValuesFrom( )) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (fontanelle) AnnotationAssertion(Annotation( ) "Anatomical structure that is a membranous gap between bones of the skull[TAO]. In humans: Fontanelles are soft spots on a baby's head which, during birth, enable the bony plates of the skull to flex, allowing the child's head to pass through the birth canal. The ossification of the bones of the skull cause the fontanelles to close over by a child's second birthday. The closures eventually form the sutures of the neurocranium. Although there are the two anterior and posterior fontanelles, there are two more fontanelles of interest, the mastoid fontanelle, and the sphenoidal fontanelle[WP].") AnnotationAssertion( "TODO - check") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0001738") Annotation( "TAO"^^xsd:string) Annotation( "TAO:wd"^^xsd:string) "Anatomical structure that is a membranous gap between bones of the skull.[TAO]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:75438") AnnotationAssertion( "MA:0001465") AnnotationAssertion( "NCIT:C32621") AnnotationAssertion( "TAO:0001738") AnnotationAssertion(Annotation( "ncithesaurus:Fontanelle") "UMLS:C0224548") AnnotationAssertion( "ZFA:0005536") AnnotationAssertion( "fontanel") AnnotationAssertion(Annotation( "TAO:0001738") Annotation( ) "fontanelles") AnnotationAssertion(Annotation( "TAO:0001738") Annotation( ) "fontanels") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "fonticuli cranii") AnnotationAssertion( "UBERON:0002221") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "fontanelle") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/b/b3/Gray197.png"^^xsd:anyURI) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ) SubClassOf(Annotation( "MA"^^xsd:string) Annotation( "ZFA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (perichondrium) AnnotationAssertion(Annotation( ) Annotation( ) Annotation( "GO_REF:0000034"^^xsd:string) Annotation( "PSPUB:0000170"^^xsd:string) Annotation( "VSAO:0000036") "Fibrous connective tissue that surrounds cartilage.") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0001643") Annotation( "TAO"^^xsd:string) Annotation( "TAO:wd"^^xsd:string) "Portion of connective tissue which surrounds cartilage.[TAO]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010445") AnnotationAssertion( "BTO:0005089") AnnotationAssertion( "EMAPA:35676") AnnotationAssertion( "FMA:75446") AnnotationAssertion( "MA:0003008") AnnotationAssertion( "TAO:0001643") AnnotationAssertion( "VSAO:0000036") AnnotationAssertion( "XAO:0004049") AnnotationAssertion( "ZFA:0001634") AnnotationAssertion( "uberon") AnnotationAssertion( "cartilage connective tissue") AnnotationAssertion( "perichondral region of cartilage") AnnotationAssertion( "perichondral region of cartilage element") AnnotationAssertion( "UBERON:0002222") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "perichondrium") SubClassOf(Annotation( "VSAO"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (endolymphatic sac) AnnotationAssertion(Annotation( ) "From the posterior wall of the saccule a canal, the ductus endolymphaticus, is given off; this duct is joined by the ductus utriculosaccularis, and then passes along the aquaeductus vestibuli and ends in a blind pouch, the endolymphatic sac, on the posterior surface of the petrous portion of the temporal bone, where it is in contact with the dura mater. Studies suggest that the endolymphatic duct and endolymphatic sac perform both absorptive and secretory, as well as phagocytic and immunodefensive,functions . [WP,unvetted].") AnnotationAssertion( "EHDAA2 structure is embryonic") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000791") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( ) "The blind extremity of the endolymphatic duct. [TFD][VHOG]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000791") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0030223693 Liem KF, Bemis WE, Walker WF, Grande L, Functional Anatomy of the Vertebrates: An Evolutionary Perspective (2001) p.413-414 and Figure 12-15") "Many adult anamniotes have an endolymphatic duct that opens onto the surface of the head. In other vertebrates, it either is lost or forms a small, deeply seated endolymphatic sac.[well established][VHOG]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0000551") AnnotationAssertion( "EHDAA2:0000441") AnnotationAssertion( "EHDAA:7761") AnnotationAssertion( "EMAPA:17593") AnnotationAssertion( "FMA:75639") AnnotationAssertion( "GAID:887") AnnotationAssertion( "MA:0001188") AnnotationAssertion( "MESH:D004712") AnnotationAssertion( "VHOG:0000791") AnnotationAssertion(Annotation( "AAO:0000551") "saccus endolymphaticus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "saccus endolymphaticus") AnnotationAssertion( "UBERON:0002223") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "endolymphatic sac") SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (thoracic cavity) AnnotationAssertion(Annotation( ) Annotation( "UBERON:cjm"^^xsd:string) "The part of the coelemic cavity lumen that is enclosed by the walls of the thorax.") AnnotationAssertion( "In many species, the diaphragm separates thoracic and abdominal cavities") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:36497") AnnotationAssertion( "FMA:7565") AnnotationAssertion( "GAID:93") AnnotationAssertion( "MA:0000032") AnnotationAssertion( "MESH:A01.911.800") AnnotationAssertion( "NCIT:C12905") AnnotationAssertion( "OpenCyc:Mx4rmvyleLfEEduAAAACs6hRXg") AnnotationAssertion( "OpenCyc:Mx4rvhU_TpwpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Thoracic_Cavity") "UMLS:C0230139") AnnotationAssertion(Annotation( ) Annotation( ) "cavitas thoracis") AnnotationAssertion( "cavity of chest") AnnotationAssertion( "cavity of thorax") AnnotationAssertion( "chest cavity") AnnotationAssertion( "pectoral cavity") AnnotationAssertion(Annotation( "FMA:7565") "space of thoracic compartment") AnnotationAssertion( "thoracic lumen") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002224") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "thoracic cavity") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/c/ce/Gray846.png"^^xsd:anyURI) AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/e/ee/Scheme_body_cavities-en.svg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (costal arch) AnnotationAssertion(Annotation( ) "The costal margin, sometimes referred to as the costal arch, is the medial margin formed by the false ribs, which in humans is from the eighth rib to the tenth rib.") AnnotationAssertion(Annotation( "FMA"^^xsd:string) "we treat margin and arch in FMA as equivalent here, as a temporary measure. This may be split in future. We follow MA in making this a part of the rib.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37491") AnnotationAssertion( "FMA:7569") AnnotationAssertion( "FMA:7570") AnnotationAssertion( "MA:0001396") AnnotationAssertion( "NCIT:C52715") AnnotationAssertion(Annotation( "ncithesaurus:Costal_Arch") "UMLS:C0230143") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "arcus costae") AnnotationAssertion(Annotation( ) Annotation( ) "arcus costalis") AnnotationAssertion(Annotation( ) "costal margin") AnnotationAssertion(Annotation( ) "subcostal arch") AnnotationAssertion( "UBERON:0002225") AnnotationAssertion(rdfs:label "costal arch") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/3/3d/Gray115.png"^^xsd:anyURI) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "MA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (basilar membrane of cochlea) AnnotationAssertion(Annotation( ) "A stiff structural element that separates two liquid-filled tubes that run along the coil of the cochlea, the scala media and the scala tympani[WP].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:2521") AnnotationAssertion( "EMAPA:35166") AnnotationAssertion( "FMA:75706") AnnotationAssertion( "GAID:872") AnnotationAssertion( "MA:0001190") AnnotationAssertion( "MESH:D001489") AnnotationAssertion( "NCIT:C13179") AnnotationAssertion(Annotation( "BIRNLEX:2521") "UMLS:C0004816") AnnotationAssertion(Annotation( "ncithesaurus:Basilar_Membrane") "UMLS:C0004816") AnnotationAssertion(Annotation( "MA:0001190") "basilar membrane") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "lamina basilaris ductus cochlearis") AnnotationAssertion( "UBERON:0002226") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "basilar membrane of cochlea") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/0/0c/Cochlea-crosssection.png"^^xsd:anyURI) AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/9/9b/Organ_of_corti.svg"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "Wikipedia"^^xsd:string) ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (spiral organ of cochlea) AnnotationAssertion(Annotation( ) "The organ of Corti (or spiral organ) is the organ in the inner ear of mammals that contains auditory sensory cells, or 'hair cells.' [WP,unvetted].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001567") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0471210054 Butler AB and Hodos W, Comparative vertebrate neuroanatomy: Evolution and Adaptation (2005) p.33") "The auditory hair cells in tetrapods are located in the inner ear in a structure known as the basilar papilla. In mammals this structure (along with some related structure) is called the organ of Corti.[well established][VHOG]") AnnotationAssertion( "in basal early lizards, organized into 3 tonotopically organized areas, the outer areas lack a tectorial membrane[ISBN:9780387714691]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:2526") AnnotationAssertion( "BTO:0001691") AnnotationAssertion( "CALOHA:TS-0717") AnnotationAssertion( "EFO:0001364") AnnotationAssertion( "EMAPA:19061") AnnotationAssertion( "EV:0100364") AnnotationAssertion( "FMA:75715") AnnotationAssertion( "GAID:772") AnnotationAssertion( "MA:0001193") AnnotationAssertion( "NCIT:C33223") AnnotationAssertion(Annotation( "BIRNLEX:2526") "UMLS:C0029207") AnnotationAssertion(Annotation( "ncithesaurus:Organ_of_Corti") "UMLS:C0029207") AnnotationAssertion( "VHOG:0001567") AnnotationAssertion( "ncithesaurus:Spiral_Organ_of_Corti") AnnotationAssertion( "cochlear spiral organ") AnnotationAssertion(Annotation( ) Annotation( ) "organum spirale") AnnotationAssertion( "spiral organ") AnnotationAssertion( "spiral organ of Corti") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0001691") "Corti's organ") AnnotationAssertion(Annotation( "ISBN:9780387714691") Annotation( ) "auditory papilla") AnnotationAssertion(Annotation( "ISBN:9780387714691") Annotation( ) "auditory papillae") AnnotationAssertion(Annotation( "XAO:0003145") Annotation( ) "basilar papilla") AnnotationAssertion( "organ of Corti") AnnotationAssertion(Annotation( "XAO:0003145") Annotation( ) "papilla basilaris") AnnotationAssertion( "UBERON:0002227") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "spiral organ of cochlea") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/c/c7/Cochlea-crosssection.png"^^xsd:anyURI) AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/c/cb/Cochlea-crosssection.svg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "MA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (rib) AnnotationAssertion(Annotation( ) Annotation( "ZFIN:curator"^^xsd:string) "An intersegmental rod-shaped bone that forms in the peritoneal membrane and attach to the vertebral parapophyses.") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0000538") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "Endochondral bone that is intersegmental and rod-shaped, forming in the peritoneal membrane and attached to the vertebral parapophyses. Ribs protect and support internal organs.[TAO]") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0000545") Annotation( "AAO"^^xsd:string) Annotation( "AAO:Pugener_2002") "Endochondral, rodlike element that articulates with the transverse process and parapophysis (double-headed rib), or with the transverse process only (single-headed rib); it extends into the body wall and provides a site for muscle attachment.[AAO]") AnnotationAssertion( "costal") AnnotationAssertion( "In most vertebrates, ribs surround the chest. In some species, especially snakes, ribs may provide support and protection for the entire body") AnnotationAssertion( "They protect and support internal organs and enable lungs to expand by expanding the chest.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0000545") AnnotationAssertion( "CALOHA:TS-2209") AnnotationAssertion( "EFO:0003066") AnnotationAssertion( "EMAPA:18010") AnnotationAssertion( "FMA:7574") AnnotationAssertion( "GAID:245") AnnotationAssertion( "MA:0000315") AnnotationAssertion( "MESH:D012272") AnnotationAssertion( "NCIT:C12782") AnnotationAssertion( "OpenCyc:Mx4rvVjNoZwpEbGdrcN5Y29ycA") AnnotationAssertion( "TAO:0000538") AnnotationAssertion(Annotation( "ncithesaurus:Rib") "UMLS:C0035561") AnnotationAssertion( "VHOG:0001154") AnnotationAssertion( "ZFA:0000538") AnnotationAssertion( "galen:Rib") AnnotationAssertion( "uberon") AnnotationAssertion( "dorsal rib") AnnotationAssertion( "pleural rib") AnnotationAssertion(Annotation( "TAO:0000538") Annotation( ) "ribs") AnnotationAssertion( "UBERON:0002228") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "rib") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "definitional"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (interparietal bone) AnnotationAssertion(Annotation( ) Annotation( "MP:0000077") "The bone of the cranium that lies above and anterior to the occipital bone in some mammals.") AnnotationAssertion( "consider splitting classes for inter-parietal and post-parietal. postparietals paired in reptiles, fused in mammals.") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001327") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-3899370805 Arratia G, Schultze HP, Wilson MVH, Mesozoic Fishes 4 - Homology and Phylogeny (2008) p.23-48") "The homologization of cranial bones of actinopterygians with those of sarcopterygians based on the bone names established in human anatomy is favored in order to permit the building of phylogenetic relationship schemes beyond the taxonomic boundaries of osteichthyans (including tetrapods). (...) In actinopterygians, the terms parietal and postparietal bones have to replace the commonly used terms 'frontal' and 'parietal' bones for the two paired bones on the skull roof.[well established][VHOG]") AnnotationAssertion(Annotation( ) "rarely present in humans") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EHDAA:9530") AnnotationAssertion( "EMAPA:19017") AnnotationAssertion( "FMA:75748") AnnotationAssertion( "MA:0001467") AnnotationAssertion( "VHOG:0001327") AnnotationAssertion(Annotation( "EMAPA:19017") "inter-parietal bone") AnnotationAssertion(Annotation( "EHDAA:9530") "interparietal") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "inca bone") AnnotationAssertion(Annotation( ) "os interparietale") AnnotationAssertion(Annotation( ) "ossicle of Goethe") AnnotationAssertion(Annotation( "VHOG:0001327") "post-parietal bone") AnnotationAssertion(Annotation( "VHOG:0001327") "postparietal") AnnotationAssertion(Annotation( "VHOG:0001327") "postparietal bone") AnnotationAssertion( "UBERON:0002229") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "interparietal bone") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "vault series") Annotation( "ISBN:0073040584"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "definitional"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (head of rib) AnnotationAssertion(Annotation( ) Annotation( ) "The head of the rib is the end of a rib closest to the vertebral column, with which it articulates with.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37735") AnnotationAssertion( "FMA:7575") AnnotationAssertion( "MA:0001415") AnnotationAssertion( "NCIT:C52727") AnnotationAssertion(Annotation( "ncithesaurus:Rib_Head") "UMLS:C0222806") AnnotationAssertion( "rib head") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "caput costae") AnnotationAssertion( "UBERON:0002230") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "head of rib") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/5/5c/Gray122.png"^^xsd:anyURI) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (body of rib) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:36014") AnnotationAssertion( "FMA:7577") AnnotationAssertion( "MA:0001416") AnnotationAssertion( "NCIT:C52728") AnnotationAssertion(Annotation( "ncithesaurus:Rib_Shaft") "UMLS:C0448161") AnnotationAssertion(Annotation( "FMA:7577") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "corpus costae") AnnotationAssertion( "rib body") AnnotationAssertion( "rib shaft") AnnotationAssertion( "shaft of rib") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002231") AnnotationAssertion(rdfs:label "body of rib") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (olfactory gland) AnnotationAssertion(Annotation( ) "Bowman's glands (aka olfactory glands, glands of Bowman) are situated in the olfactory mucosa, beneath the olfactory epithelium, in the lamina propria, a connective tissue also containing fibroblasts, blood vessels, and bundles of fine axons from the olfactory neurons. The structure of the Bowman's glands consists of an acinus in the lamina propria and a secretory duct going out through the olfactory epithelium. Electron microscopy studies show that Bowman's glands contain cells with large secretory vesicles. Bowman's glands might secrete proteins such as Lysozyme, amylase and IgA similarly to serous glands. The exact composition of the secretions from Bowman's glands is unclear, but there is evidence that Bowman's glands do not produce odorant binding protein[WP].") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0010162") Annotation( "AAO"^^xsd:string) Annotation( "AAO:EJS"^^xsd:string) "Multicellular mucous glands of the olfactory epithelium, present only in adults.[AAO]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010162") AnnotationAssertion( "BTO:0001697") AnnotationAssertion( "EMAPA:35613") AnnotationAssertion( "FMA:75801") AnnotationAssertion( "MA:0000287") AnnotationAssertion( "olfactory gland of Bowman") AnnotationAssertion( "uberon") AnnotationAssertion( "Bowman's gland") AnnotationAssertion( "gland of Bowman") AnnotationAssertion(Annotation( ) Annotation( ) "glandulae olfactoriae") AnnotationAssertion( "UBERON:0002232") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "olfactory gland") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/4/4d/Gray857.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (tectorial membrane of cochlea) AnnotationAssertion(Annotation( "J:77634") Annotation( "MGI:anna"^^xsd:string) Annotation( "MP:0003149") "The overlaying membrane of the cochlear duct, an extracellular matrix of the inner ear that contacts the stereocilia bundles of specialized sensory hair cells; sound induces movement of these hair cells relative to the tectorial membrane, deflects the stereocilia, and leads to fluctuations in hair cell membrane potential, transducing sound into electrical signals[MP,modified].") AnnotationAssertion(Annotation( ) "The tectorial membrane (TM) is one of two acellular gels in the cochlea of the inner ear, the other being the basilar membrane (BM). The TM is located above the sulcus spiralis internus and the spiral organ of Corti and extends along the longitudinal length of the cochlea parallel to the BM. Radially the TM is divided into three zones, the limbal, middle and marginal zones. Of these the limbal zone is the thinnest (transversally) and overlies the auditory teeth of Huschke with its inside edge attached to the spiral limbus. The marginal zone is the thickest (transversally) and is divided from the middle zone by Hensen's Stripe. It overlies the sensory inner hair cells and electrically-motile outer hair cells of the organ of Corti and during acoustic stimulation stimulates the inner hair cells through fluid coupling, and the outer hair cells via direct connection to their tallest stereocilia[Wikipedia:Tectorial_membrane_(cochlea)].") AnnotationAssertion( "in some squamate lineages, the tectorial membrane may not cover the whole cochlear duct/papilla. In some lineages, the tectorial membrane is divided into units called sallets[ISBN:9780387714691]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:2531") AnnotationAssertion( "EMAPA:35851") AnnotationAssertion( "FMA:75805") AnnotationAssertion( "GAID:876") AnnotationAssertion( "MA:0001199") AnnotationAssertion( "MESH:A09.246.631.246.292.906") AnnotationAssertion( "NCIT:C33740") AnnotationAssertion(Annotation( "ncithesaurus:Tectorial_Membrane") "UMLS:C0039432") AnnotationAssertion(Annotation( "BIRNLEX:2531") "UMLS:C1184928") AnnotationAssertion(Annotation( "MA:0001199") "tectorial membrane") AnnotationAssertion( "tectorial membrane of spiral organ of cochlea") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002233") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "tectorial membrane of cochlea") SubClassOf( ) SubClassOf(Annotation( "Wikipedia"^^xsd:string) ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "limbal zone") ObjectSomeValuesFrom( )) # Class: (proximal phalanx of manus) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A proximal phalanx that is part of a finger [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37307") AnnotationAssertion( "FMA:75816") AnnotationAssertion( "MA:0001395") AnnotationAssertion( "NCIT:C52786") AnnotationAssertion(Annotation( "ncithesaurus:Proximal_Phalanx_of_Hand") "UMLS:C0730117") AnnotationAssertion(Annotation( "MA:0001395") "hand proximal phalanx") AnnotationAssertion(Annotation( "FMA:75816") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "phalanx proximalis manus") AnnotationAssertion( "proximal manual phalanx") AnnotationAssertion(Annotation( "FMA:75816") "proximal phalanx of finger") AnnotationAssertion( "proximal phalanx of fore digit") AnnotationAssertion( "proximal phalanx of hand") AnnotationAssertion( "proximal phalanx of manual digit") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002234") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "proximal phalanx of manus") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (tubercle of rib) AnnotationAssertion(Annotation( ) "The tubercle of a rib is an eminence on the posterior surface, at the junction of the neck and body of the rib, and nearer the lower than the upper border. It consists of an articular and a non-articular portion. The articular portion, the lower and more medial of the two, presents a small, oval surface for articulation with the end of the transverse process of the lower of the two vertebrae to which the head is connected. The non-articular portion is a rough elevation, and affords attachment to the ligament of the tubercle. The tubercle is much more prominent in the upper than in the lower ribs[WP].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37736") AnnotationAssertion( "FMA:7583") AnnotationAssertion( "MA:0001417") AnnotationAssertion( "NCIT:C52729") AnnotationAssertion(Annotation( "ncithesaurus:Rib_Tubercle") "UMLS:C0222809") AnnotationAssertion( "rib tubercle") AnnotationAssertion(Annotation( "FMA:7583") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "tuberculum costae") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002235") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "tubercle of rib") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) DisjointClasses( ) # Class: (costal cartilage) AnnotationAssertion(Annotation( "ISBN:0-8036-0655-9") Annotation( "MGI:smb"^^xsd:string) Annotation( "MP:0006432") "The nonvascular, resilient, flexible hyaline connective tissue that connects the end of a true rib to the sternum or the end of a false rib with the with the lower border of the costal cartilage above it.") AnnotationAssertion( "we currently model this as part of the rib, is this correct?") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0001721") AnnotationAssertion( "EMAPA:35262") AnnotationAssertion( "FMA:7591") AnnotationAssertion( "MA:0000106") AnnotationAssertion( "NCIT:C32391") AnnotationAssertion( "OpenCyc:Mx4rwP1g3pwpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Costal_Cartilage") "UMLS:C0222787") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "cartilagines costales") AnnotationAssertion(Annotation( "BTO:0001721") "cartilago costalis") AnnotationAssertion(Annotation( "BTO:0001721") "sternal cartilage") AnnotationAssertion( "UBERON:0002236") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "costal cartilage") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/c/cc/Gray315.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (true rib) AnnotationAssertion(Annotation( ) Annotation( "ISBN:0073040584"^^xsd:string) "A rib that is ventrally connected to the sternum.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37774") AnnotationAssertion( "FMA:7592") AnnotationAssertion( "MA:0001419") AnnotationAssertion( "OpenCyc:Mx4rv4-iWJwpEbGdrcN5Y29ycA") AnnotationAssertion( "costa vera") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "costae verae") AnnotationAssertion( "UBERON:0002237") AnnotationAssertion(rdfs:label "true rib") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/3/3d/Gray115.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses( ) # Class: (false rib) AnnotationAssertion(Annotation( ) Annotation( "ISBN:0073040584"^^xsd:string) "A rib that is not directly ventrally connected to the sternum.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37493") AnnotationAssertion( "FMA:7594") AnnotationAssertion( "MA:0001398") AnnotationAssertion( "OpenCyc:Mx4rwLzzTZwpEbGdrcN5Y29ycA") AnnotationAssertion( "costa spuria") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "asternal ribs") AnnotationAssertion(Annotation( ) Annotation( ) "costae spuriae") AnnotationAssertion( "UBERON:0002238") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "false rib") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/3/3d/Gray115.png"^^xsd:anyURI) SubClassOf( ) # Class: (floating rib) AnnotationAssertion(Annotation( ) Annotation( "ISBN:0073040584"^^xsd:string) "A rib that is not connected to sternum or sternal cartilage.") AnnotationAssertion( "We synonymize 'free rib' with 'floating rib' - this case it referes to caudal ribs, but you can have free ribs (i.e. non-attached ventrally) in other places . Should we just synonymize this with 'floating rib'? see Primate Anatomy: An Introduction by Friderun Ankel-Simons pg. 275") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37494") AnnotationAssertion( "FMA:7595") AnnotationAssertion( "MA:0001399") AnnotationAssertion( "OpenCyc:Mx4rvaPCWZwpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( ) "costa fluitante") AnnotationAssertion(Annotation( "PHENOSCAPE:Alex") "free rib") AnnotationAssertion( "vertebral rib") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "costae fluctuantes") AnnotationAssertion(Annotation( ) Annotation( ) "costae fluitantes") AnnotationAssertion( "UBERON:0002239") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "floating rib") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/f/f7/Skeleton_woman_back.png"^^xsd:anyURI) SubClassOf( ) # Class: (spinal cord) AnnotationAssertion(Annotation( "BIRNLEX:1709") "Part of the central nervous system located in the vertebral canal continuous with and caudal to the brain; demarcated from brain by plane of foramen magnum. It is composed of an inner core of gray matter in which nerve cells predominate, and an outer layer of white matter in which myelinated nerve fibers predominate, and surrounds the central canal. (CUMBO).") AnnotationAssertion( "TODO - add superclass to unify with VNC?") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0010151") Annotation( "AAO"^^xsd:string) Annotation( "AAO:BJB"^^xsd:string) "Part of the central nervous system which descends from the hindbrain within the vertebral column.[AAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000601") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0030223693 Liem KF, Bemis WE, Walker WF, Grande L, Functional Anatomy of the Vertebrates: An Evolutionary Perspective (2001) p.28, ISBN:978-0072528305 Kardong KV, Vertebrates: Comparative Anatomy, Function, Evolution (2006) p.165") "(...) at some stage of its development, every chordate exhibits five uniquely derived characters or synapomorphies of the group: (...) (4) a single, tubular nerve cord that is located dorsal to the notochord (...) (reference 1); The neural tube is destined to differentiate into the brain and spinal cord (the central nervous system) (reference 2).[well established][VHOG]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010151") AnnotationAssertion( "BAMS:SP") AnnotationAssertion( "BAMS:Spinal") AnnotationAssertion( "BIRNLEX:1709") AnnotationAssertion( "BM:SpC") AnnotationAssertion( "BTO:0001279") AnnotationAssertion( "CALOHA:TS-0953") AnnotationAssertion( "DHBA:12890") AnnotationAssertion( "DMBA:17651") AnnotationAssertion( "EFO:0000110") AnnotationAssertion( "EHDAA2:0001255") AnnotationAssertion( "EHDAA:2863") AnnotationAssertion( "EMAPA:17577") AnnotationAssertion( "EV:0100316") AnnotationAssertion( "FMA:7647") AnnotationAssertion( "GAID:695") AnnotationAssertion( "MA:0000216") AnnotationAssertion( "MAT:0000183") AnnotationAssertion( "MESH:D013116") AnnotationAssertion( "MIAA:0000183") AnnotationAssertion( "NCIT:C12464") AnnotationAssertion( "OpenCyc:Mx4rvVjjk5wpEbGdrcN5Y29ycA") AnnotationAssertion( "TAO:0000075") AnnotationAssertion(Annotation( "BIRNLEX:1709") "UMLS:C0037925") AnnotationAssertion(Annotation( "ncithesaurus:Spinal_Cord") "UMLS:C0037925") AnnotationAssertion( "VHOG:0000601") AnnotationAssertion( "XAO:0000020") AnnotationAssertion( "ZFA:0000075") AnnotationAssertion(Annotation( "BIRNLEX:1709") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=22") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "SpC") AnnotationAssertion(Annotation( "NeuroNames:22") "cerebro-cerebellar fissure") AnnotationAssertion(Annotation( "NeuroNames:22") "cerebrocerebellar fissure") AnnotationAssertion(Annotation( "NeuroNames:22") Annotation( ) "fissura cerebro-cerebellaris") AnnotationAssertion(Annotation( "NeuroNames:22") Annotation( ) "fissura cerebrocerebellaris") AnnotationAssertion(Annotation( ) Annotation( ) "medulla spinalis") AnnotationAssertion(Annotation( "BTO:0001279") "medulla spinalis") AnnotationAssertion(Annotation( "ZFA:0000075") "spinal cord structure") AnnotationAssertion(Annotation( "BTO:0001279") "spinal medulla") AnnotationAssertion( "UBERON:0002240") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "spinal cord") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/5/58/Spinal_cord_direv.svg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "ZFA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "definitional"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "definitional"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (chondrocranium) AnnotationAssertion(Annotation( ) Annotation( ) "Endoskeletal elements that encase the brain, nose, inner ear[cjm]. that part of the neurocranium formed by endochondral ossification and comprising the bones of the base of the skull[TFD].") AnnotationAssertion( "we follow the standard evolutionary classification and treat this as endoskeletal. This means what MA calls 'chondrocranium' must in fact be neurocranium, as it includes parts of the dermatocranium (e.g. frontal, parietal)") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0010169") Annotation( "AAO"^^xsd:string) Annotation( "AAO:BJB"^^xsd:string) "Anatomical cluster that is part of the cranium and composed of cartilage and cartilage replacement bones.[AAO]") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0001424") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "Anatomical cluster that is part of the cranium and composed of cartilage and cartilage replacement bones.[TAO]") AnnotationAssertion( "chondrocranial") AnnotationAssertion( "covers the brain dorsally in chondrichthyans") AnnotationAssertion( ) AnnotationAssertion( "AAO:0010169") AnnotationAssertion( "EHDAA2:0000243") AnnotationAssertion( "EMAPA:17681") AnnotationAssertion( "TAO:0001424") AnnotationAssertion( "VHOG:0000288") AnnotationAssertion( "ZFA:0001424") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "MA:0000317") "calvarium") AnnotationAssertion(Annotation( "MA:0000317") Annotation( ) "neurocranium") AnnotationAssertion( "UBERON:0002241") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "chondrocranium") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) # Class: (nucleus pulposus) AnnotationAssertion(Annotation( "MGI:llw2") Annotation( "MP:0006392") "The jelly-like substance in the middle of the spinal disc which is a remnant of the notochord.") AnnotationAssertion( "The nucleus pulposus consists of chondrocytes, collagen fibrils, and proteoglycan aggrecans that have hyaluronic long chains which attract water. Attached to each hyaluronic chain are side chains of chondroitin sulfate and keratan sulfate[Wikipedia:Nucleus_pulposus]") AnnotationAssertion(Annotation( "FMA"^^xsd:string) "we group two FMA classes together") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0003626") AnnotationAssertion( "EMAPA:18008") AnnotationAssertion( "FMA:13550") AnnotationAssertion( "FMA:76703") AnnotationAssertion( "MA:0000112") AnnotationAssertion(Annotation( "FMA:13550") "nucleus pulposus (diskus intervertebralis)") AnnotationAssertion( "pulpy nucleus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "nucleus propulsus") AnnotationAssertion(Annotation( ) "nucleus propulsus of intervertebral disk") AnnotationAssertion(Annotation( "FMA:13550") "nucleus pulposus of intervertebral disk") AnnotationAssertion( "UBERON:0002242") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "Function noyes: It functions to distribute hydraulic pressure in all directions within each disc under compressive loads.") AnnotationAssertion(rdfs:label "nucleus pulposus") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/d/d9/Cervical_vertebra_english.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "mah") Annotation( "ISBN:0073040584"^^xsd:string) Annotation( "Wikipedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (cutaneous vein) AnnotationAssertion(Annotation( ) "One of a number of veins in the subcutaneous tissue that empty into deep veins.") AnnotationAssertion(Annotation( "FMA"^^xsd:string) "GAT in FMA") AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37506") AnnotationAssertion( "FMA:76720") AnnotationAssertion( "MA:0002098") AnnotationAssertion( "NCIT:C53041") AnnotationAssertion(Annotation( "ncithesaurus:Cutaneous_Vein") "UMLS:C1185726") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002243") AnnotationAssertion(rdfs:label "cutaneous vein") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (premaxilla) AnnotationAssertion(Annotation( ) Annotation( ) Annotation( "VHOG:0000426") "One of the bones of the upper jaw situated between and in front of the maxillae[VHOG].") AnnotationAssertion( "requires checking embryonic vs adult; isa fetal organ part in FMA; adult bone of upper jaw in AAO and ZFA; split. Note that we have loops if we add develops_from UBERON:0005620 primary palate") AnnotationAssertion(Annotation( "Wikipedia"^^xsd:string) ) AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0000567") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "Dermal bone that forms the anteriormost element of the upper jaw. It articulates with the maxilla posterodorsally and its antimere medially. The premaxilla is paired.[TAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000426") Annotation( "VHOG"^^xsd:string) Annotation( ) "One of the bones of the upper jaw situated between and in front of the maxillae. [Dorian_AF, Elsevier's_encyclopaedic_dictionary_of_medicine, Part_B:_Anatomy_(1988)_Amsterdam_etc.:_Elsevier][VHOG]") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0000461") Annotation( "AAO"^^xsd:string) Annotation( "AAO:LAP"^^xsd:string) "Paired, intramembranous bones located at the anterior end of the skull; they form the anterior-most segment of the maxillary arch.[AAO]") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0000567") Annotation( "TAO"^^xsd:string) "relationship loss: overlaps inter-premaxillary joint (TAO:0001950)[TAO]") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0000567") Annotation( "TAO"^^xsd:string) "relationship loss: overlaps mesethmoid-premaxillary joint (TAO:0001676)[TAO]") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0000567") Annotation( "TAO"^^xsd:string) "relationship loss: overlaps premaxillary-maxillary joint (TAO:0002260)[TAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000426") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "DOI:10.1017/S0022215100025585 O'Malley JF, Evolution of the nasal cavities and sinuses in relation to function. The Journal of Laryngology and Otology (1924), ISBN:978-3540428541 Kapoor BG, Bhavna Khanna, Ichthyology Handbook (2004) p.105") "(...) in all higher vertebrates a premaxilla is present (...) (reference 1); Although the presence of a tooth-bearing outer buccal arcade (premaxilla, maxilla, dentary) is cited as a common character of Osteichthyes, dipnoans lack all three bones (...) (reference 2).[well established][VHOG]") AnnotationAssertion( "UBERON:0002253") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0000461") AnnotationAssertion( "EHDAA:6962") AnnotationAssertion( "EHDAA:8033") AnnotationAssertion( "EMAPA:17641") AnnotationAssertion( "FMA:76869") AnnotationAssertion( "FMA:77231") AnnotationAssertion( "MA:0001493") AnnotationAssertion( "TAO:0000567") AnnotationAssertion( "VHOG:0000426") AnnotationAssertion( "ZFA:0000567") AnnotationAssertion(Annotation( ) "premaxillae") AnnotationAssertion(Annotation( "PHENOSCAPE:ad"^^xsd:string) "premaxillary") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "incisive bone") AnnotationAssertion(Annotation( ) "os incisivum") AnnotationAssertion(Annotation( ) "premaxilla bone") AnnotationAssertion(Annotation( ) "premaxillary bone") AnnotationAssertion( "UBERON:0002244") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "premaxilla") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/4/4a/Gray160.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "ISBN:0073040584"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "Bgee:AN"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (cerebellar hemisphere) AnnotationAssertion(Annotation( ) Annotation( "MP:0009959") "A paired regions of the cerebellum that lie outside and lateral to the central vermis[MP]. The cerebellum consists of three parts, a median and two lateral, which are continuous with each other, and are substantially the same in structure. The median portion is constricted, and is called the vermis, from its annulated appearance which it owes to the transverse ridges and furrows upon it; the lateral expanded portions are named the hemispheres. The lateral hemisphere is considered the portion of the cerebellum to develop most recently. [WP,unvetted].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:CH") AnnotationAssertion( "BIRNLEX:1575") AnnotationAssertion( "DHBA:10659") AnnotationAssertion( "DMBA:16920") AnnotationAssertion( "EMAPA:35218") AnnotationAssertion( "FMA:76925") AnnotationAssertion( "HBA:12930") AnnotationAssertion( "MA:0000200") AnnotationAssertion( "MBA:1073") AnnotationAssertion( "NCIT:C32726") AnnotationAssertion(Annotation( "ncithesaurus:Hemisphere_of_the_Cerebellum") "UMLS:C0228465") AnnotationAssertion( "cerebellar hemisphere") AnnotationAssertion( "cerebellum hemisphere") AnnotationAssertion(Annotation( "FMA:76925") "hemisphere of cerebellum") AnnotationAssertion( "hemisphere of cerebellum [H II - H X]") AnnotationAssertion(Annotation( "FMA:76925") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "hemispherium cerebelli [H II - H X]") AnnotationAssertion(Annotation( "FMA:76925") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "hemispherium cerebelli [hII-hX]") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "cerebellar hemispheres") AnnotationAssertion(Annotation( ) Annotation( ) "hemispherium cerebelli") AnnotationAssertion( "UBERON:0002245") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "cerebellar hemisphere") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/4/43/CerebellumDiv.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (dorsal thoracic nucleus) AnnotationAssertion(Annotation( "NLXANAT:20090102") "Two column-shaped nuclear masses formed by large cells. Clarke's nuclei are located in the regions dorsolateral to the central canal in the thoratic and upper lumbar segments.") AnnotationAssertion(Annotation( ) "Clarke's column (column of Clarke, dorsal nucleus, posterior thoracic nucleus, nucleus dorsalis of Clarke) is a group of interneurons found in the medial part of Lamina VII, also known as the intermediate zone, of the spinal cord. It is mainly located from the T1 to L3-L4 levels and is an important structure for proprioception[Wikipedia:Posterior_thoracic_nucleus].") AnnotationAssertion( "Sarah M. Maynard") AnnotationAssertion( ) AnnotationAssertion( "BAMS:DSN") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37635") AnnotationAssertion( "FMA:73912") AnnotationAssertion( "FMA:77023") AnnotationAssertion( "MA:0001121") AnnotationAssertion( "NLXANAT:20090102") AnnotationAssertion( "Clarke's column") AnnotationAssertion( "Clarke's nucleus") AnnotationAssertion( "Stilling-Clarke's column") AnnotationAssertion( "Stilling-Clarke's nucleus") AnnotationAssertion(Annotation( "FMA:73912") "dorsal nucleus of Clarke") AnnotationAssertion(Annotation( "FMA:77023") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "nucleus thoracicus dorsalis") AnnotationAssertion(Annotation( "FMA:77023") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "nucleus thoracicus posterior") AnnotationAssertion( "posterior thoracic nucleus") AnnotationAssertion( "spinal cord dorsal nucleus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NLXANAT:20090102") Annotation( ) "Clarke's nuclei") AnnotationAssertion(Annotation( "BAMS:DSN") "dorsal nucleus of the spinal cord") AnnotationAssertion(Annotation( "BAMS:DSN") "dorsal nucleus of the spinal cord rostral part") AnnotationAssertion( "UBERON:0002246") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "dorsal thoracic nucleus") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (uterine horn) AnnotationAssertion(Annotation( "MGI:anna"^^xsd:string) Annotation( "MP:0009085") "Either one of the pair of tubular extensions from the uterine body where the uterus and the uterine tubes meet; uterine horns are anterior Mullerian duct-derived structures.") AnnotationAssertion(Annotation( "WP"^^xsd:string) "The uterine horns are far more prominent in other animals than they are in humans") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0004235") AnnotationAssertion( "EMAPA:18985") AnnotationAssertion( "FMA:77053") AnnotationAssertion( "MA:0000393") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0004235") "cornu uteri") AnnotationAssertion( "UBERON:0002247") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "uterine horn") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/2/27/Illu_female_pelvis.jpg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "MA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (transverse pericardial sinus) AnnotationAssertion(Annotation( ) "The passage between the venous and arterial mesocardia -i.e., between the aorta and pulmonary artery in front and the superior vena cava behind. Also, the sinus that forms in the pericardial cavity where the dorso-mesentary pericardium reside.[WP,unvetted].") AnnotationAssertion( "transverse sinus") AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0002077") AnnotationAssertion( "EHDAA:796") AnnotationAssertion( "EMAPA:16214") AnnotationAssertion( "FMA:77132") AnnotationAssertion( "MA:0001880") AnnotationAssertion(Annotation( "FMA:77132") "Thiele's canal") AnnotationAssertion(Annotation( "FMA:77132") "transverse sinus of pericardial cavity") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002248") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "transverse pericardial sinus") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/7/7e/Gray489.png"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "MA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (median artery) AnnotationAssertion(Annotation( ) "An artery found in the forearm, between the radial artery and ulnar artery. It runs with the median nerve and supplies the same structures as that nerve. It may be unilateral or bilater.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37103") AnnotationAssertion( "FMA:77142") AnnotationAssertion( "MA:0001999") AnnotationAssertion( "NCIT:C52970") AnnotationAssertion(Annotation( "ncithesaurus:Median_Artery") "UMLS:C0687034") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002249") AnnotationAssertion(rdfs:label "median artery") SubClassOf( ) SubClassOf( ) # Class: (popliteal artery) AnnotationAssertion(Annotation( "MESH:A07.231.114.681") "The continuation of the femoral artery coursing through the popliteal fossa; it divides into the anterior and posterior tibial arteries.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37109") AnnotationAssertion( "FMA:77155") AnnotationAssertion( "GAID:504") AnnotationAssertion( "MA:0002021") AnnotationAssertion( "MESH:D011150") AnnotationAssertion( "NCIT:C33337") AnnotationAssertion( "OpenCyc:Mx4rvduV6pwpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Popliteal_Artery") "UMLS:C0032649") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "arteria poplitea") AnnotationAssertion( "UBERON:0002250") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "popliteal artery") AnnotationAssertion( "Popliteal:artery.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (iliocostalis muscle) AnnotationAssertion(Annotation( ) "The iliocostalis is the muscle immediately lateral to the longissimus that is the nearest to the furrow that separates the epaxial muscles from the hypaxial. It lies very deep to the fleshy portion of the serratus ventralis (serratus anterior). [WP,unvetted].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37603") AnnotationAssertion( "FMA:77177") AnnotationAssertion( "MA:0002319") AnnotationAssertion( "NCIT:C32763") AnnotationAssertion(Annotation( "ncithesaurus:Iliocostal_Muscle") "UMLS:C0224304") AnnotationAssertion( "iliocostal muscle") AnnotationAssertion( "iliocostalis") AnnotationAssertion(Annotation( ) Annotation( ) "musculus iliocostalis") AnnotationAssertion( "uberon") AnnotationAssertion( "lateral column of erector spinae") AnnotationAssertion( "UBERON:0002251") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "iliocostalis muscle") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/8/89/Iliostalis.png"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf(Annotation( "Wikipedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "Sacrum/Illiac Crest/Spinous Processes of lower lumbar/thoracic vertebrae") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "Sacrum/Illiac Crest/Spinous Processes of lower lumbar/thoracic vertebrae") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "Ribs") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (splenius) AnnotationAssertion(Annotation( ) Annotation( ) "A superficial postvertebral muscle innervated by the posterior ramus of the cervical spinal nerve with origins in the upper thoracic and lower cervical spinous processes whose actions are to extend and ipsilaterally rotate the head and neck. Examples: splenius capitis, splenius cervicis.") AnnotationAssertion(Annotation( "MA"^^xsd:string) "Muscle of neck in MA") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37701") AnnotationAssertion( "FMA:77180") AnnotationAssertion( "MA:0002382") AnnotationAssertion( "NCIT:C53177") AnnotationAssertion(Annotation( "ncithesaurus:Splenius") "UMLS:C1185944") AnnotationAssertion( "splenius muscle") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002252") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "splenius") SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) SubClassOf( ObjectSomeValuesFrom( )) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (thyroglossal duct) AnnotationAssertion(Annotation( "MP:0013235") "An embryological anatomical structure that forms an open connection between the initial area of development of the thyroid gland and its final position; it is located exactly midline, between the anterior 2/3rds and posterior 1/3rd of the tongue; this duct normally atrophies and closes off as the foramen cecum before birth.") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000746") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( ) "An embryonic duct extending between the thyroid primordium and the posterior tongue. [TFD][VHOG]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000746") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "DOI:10.1007/s00427-004-0450-0 Kluge B, Renault N, Rohr KB, Anatomical and molecular reinvestigation of lamprey endostyle development provides new insight into thyroid gland evolution. Development genes and evolution (2005)") "A duct, called the thyroglossal duct in mammals, is considered to be characteristic of thyroid development. The thyroglossal duct, degenerating in many species during late development, marks the way the thyroid primordium relocates during embryonic development from the pharynx to its position deep in the cervical mesenchyme. We cannot exclude that the duct of the endostyle and the thyroglossal duct may have evolved independently, but as they both represent a more or less persistent connection of the organ to the pharynx, it is likely that they are homologous structures.[well established][VHOG]") AnnotationAssertion(Annotation( "FMA"^^xsd:string) "FMA treats this as vestigial") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:17070") AnnotationAssertion( "FMA:77274") AnnotationAssertion( "MA:0000130") AnnotationAssertion( "NCIT:C49783") AnnotationAssertion(Annotation( "ncithesaurus:Thyroglossal_Duct") "UMLS:C0231104") AnnotationAssertion( "VHOG:0000746") AnnotationAssertion(Annotation( ) "ductus thyroglossus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "ductus thyroglossalis") AnnotationAssertion( "UBERON:0002254") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "thyroglossal duct") AnnotationAssertion( "Illu08:thyroid.jpg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ) SubClassOf(Annotation( "MA"^^xsd:string) Annotation( "VHOG"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (vomeronasal organ) AnnotationAssertion(Annotation( "VHOG:0000665") "An organ thought to supplement the olfactory system in receiving pheromonic communication. The sensory part of the organ is in two long, thin sacs, situated on either side of the nasal septum at its base.") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000665") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( ) "An organ thought to supplement the olfactory system in receiving pheromonic communication. The sensory part of the organ is in two long, thin sacs, situated on either side of the nasal septum at its base. [TFD][VHOG]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000665") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0072528305 Kardong KV, Vertebrates: Comparative Anatomy, Function, Evolution (2006) p.669 (ref.1), http://www.ncbi.nlm.nih.gov/pubmed/9866877 Doving KB, Trotier D, Review: Structure and function of the vomeronasal organ. The Journal of Experimental Biology (1998) (ref.2), DOI:10.1046/j.1469-7580.2001.19810077.x Smith TD, Siegel MI, Bonar CJ, Bhatnagar KP, Mooney MP, Burrows AM, Smith MA, Maico LM, The existence of the vomeronasal organ in postnatal chimpanzees and evidence for its homology with that of humans. J Anat (2001) (ref.3) , DOI:10.1002/ar.22415 Nakamuta S, Nakamuta N, Taniguchi K, Taniguchi K, Histological and ultrastructural characteristics of the primordial vomeronasal organ in lungfish. Anat Rec (Hoboken) (2012) (ref.4)") "(...) the vomeronasal organ is known only in some tetrapods. It is absent in most turtles, crocodiles, birds, some bats, and aquatic mammals. In amphibians, it is in a recessed area off the main nasal cavity. (...) In mammals possesing this organ, it is an isolated area of olfactory membrane within the nasal cavity that is usually connected to the mouth via the nasopalatine duct (reference 1); The opinions concerning the presence and functioning of the vomeronasal organ in humans are controversial. The vomeronasal cavities appear early in human foetuses. (...) Historical examination of the nasal septum revealed the presence of vomeronasal cavities in approximately 70% of adults. In contrast to the situation in other mammals, the organ is not supported by a rigid tube of bone or cartilage (reference 2); (...) the best evidence for the homology of the human VNO to that of other primates (and of mammals in general) is ontogenetic in nature, based on a common embryonic origin from a thickening (vomeronasal primordium) on the medial aspect of each olfactory pit (reference 3); (...) suggesting that lungfish possess a region homologous to the accessory olfactory bulb of tetrapods. Based on these results, it seems appropriate to refer to the recess epithelium as a primordium of the vomeronasal organ (reference 4). [debated][VHOG]") AnnotationAssertion( "Generally formed only in tetrapods; lungfish have rudimentary VN organs; true VN organs are not normally found in recent fishes, birds, aquatic reptiles, aquatic mammals (Bertmar 1980). Humans: Its presence in many animals has been widely studied and the importance of the vomeronasal system to the role of reproduction and social behavior (through influence on anterior hypothalamus) has been shown in many studies. Its presence and functionality in humans was controversial, though most studies agree the organ regresses during fetal development. Many genes essential for VNO function in animals (such as TRPC2) are non-functional in humans (Liman ER. Use it or lose it: molecular evolution of sensory signaling in primates. Pflugers Arch. 2006;453(2):125-31.)") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0000997") AnnotationAssertion( "BTO:0002608") AnnotationAssertion( "EFO:0001934") AnnotationAssertion( "EHDAA2:0002211") AnnotationAssertion( "EHDAA:7865") AnnotationAssertion( "EMAPA:17612") AnnotationAssertion( "FMA:77280") AnnotationAssertion( "GAID:354") AnnotationAssertion( "MA:0000289") AnnotationAssertion( "MESH:A04.531.591.940") AnnotationAssertion( "VHOG:0000665") AnnotationAssertion( "XAO:0000272") AnnotationAssertion(Annotation( "XAO:0000272") "Jacobson's organ") AnnotationAssertion(Annotation( ) "organon vomeronasale") AnnotationAssertion(Annotation( ) Annotation( ) "organum vomeronasale") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "VHOG:0000665") "VNO") AnnotationAssertion( "organ of Jacobsen") AnnotationAssertion( "UBERON:0002255") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "vomeronasal organ") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/8/84/Gray51.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "Wikipedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2-abduced") ObjectSomeValuesFrom( )) # Class: (dorsal horn of spinal cord) AnnotationAssertion(Annotation( ) Annotation( ) Annotation( "GO:0021516") Annotation( "MP:0006282") "The pronounced, dorsolaterally oriented ridge of grey matter in each lateral half of the spinal cord[MP]. the dorsal (more towards the back) grey matter of the spinal cord. It receives several types of sensory information from the body, including light touch, proprioception, and vibration. This information is sent from receptors of the skin, bones, and joints through sensory neurons whose cell bodies lie in the dorsal root ganglion[WP]. The dorsal region of the mature spinal cord contains neurons that process and relay sensory input[GO].") AnnotationAssertion(Annotation( "EMAPA:18574") "dorsal grey horn") AnnotationAssertion(Annotation( "ZFA:0000649") "dorsal horn") AnnotationAssertion( "dorsal region of mature spinal cord") AnnotationAssertion( "dorsal region of spinal cord") AnnotationAssertion( "dorsal spinal cord") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:DH") AnnotationAssertion( "BIRNLEX:2667") AnnotationAssertion( "BM:SpC-DH") AnnotationAssertion( "EMAPA:18574") AnnotationAssertion( "EMAPA:35790") AnnotationAssertion( "FMA:256530") AnnotationAssertion( "MA:0001119") AnnotationAssertion( "NCIT:C32473") AnnotationAssertion( "TAO:0000649") AnnotationAssertion(Annotation( "BIRNLEX:2667") "UMLS:C0228564") AnnotationAssertion(Annotation( "ncithesaurus:Dorsal_Horn_of_the_Spinal_Cord") "UMLS:C0228575") AnnotationAssertion( "VHOG:0001287") AnnotationAssertion( "ZFA:0000649") AnnotationAssertion(Annotation( "FMA:256530") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "columna grisea posterior medullae spinalis") AnnotationAssertion(Annotation( "ZFA:0000649") "cornu dorsale") AnnotationAssertion(Annotation( ) Annotation( ) "cornu posterius medullae spinalis") AnnotationAssertion(Annotation( "FMA:256530") "dorsal gray column of spinal cord") AnnotationAssertion(Annotation( "BIRNLEX:2667") "dorsal gray horn") AnnotationAssertion(Annotation( "FMA:256530") "dorsal gray matter of spinal cord") AnnotationAssertion( "dorsal grey column of spinal cord") AnnotationAssertion(Annotation( "ZFA:0000649") "dorsal horn spinal cord") AnnotationAssertion(Annotation( "FMA:256530") "posterior gray column of spinal cord") AnnotationAssertion(Annotation( "FMA:256530") "posterior gray horn of spinal cord") AnnotationAssertion( "posterior grey column of spinal cord") AnnotationAssertion(Annotation( ) "posterior horn of spinal cord") AnnotationAssertion( "spinal cord dorsal horn") AnnotationAssertion(Annotation( "BIRNLEX:2667") "spinal cord posterior horn") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BAMS:DH") "dorsal horn of the spinal cord") AnnotationAssertion(Annotation( ) "spinal cord dorsal horns") AnnotationAssertion( "UBERON:0002256") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "dorsal horn of spinal cord") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/d/dc/Medulla_spinalis_-_Section_-_English.svg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA-abduced-lr"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses(Annotation( "lexical"^^xsd:string) ) # Class: (ventral horn of spinal cord) AnnotationAssertion(Annotation( ) Annotation( ) Annotation( "GO:0021517") Annotation( "MP:0005112") "The ventral grey column of the spinal cord[MP]. The neurons of the ventral region of the mature spinal cord participate in motor output[GO].") AnnotationAssertion(Annotation( ) "The anterior horn of the spinal cord (or anterior cornu, or anterior column, or ventral horn) is the ventral (front) grey matter section of the spinal cord. The anterior horn contains motor neurons that affect the axial muscles while the posterior horn receives information regarding touch and sensation. The anterior horn is where the cell bodies of alpha motorneurons are located[Wikipedia:Anterior_horn_of_spinal_cord].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:VH") AnnotationAssertion( "BIRNLEX:2668") AnnotationAssertion( "BTO:0005151") AnnotationAssertion( "EMAPA:18575") AnnotationAssertion( "EMAPA:35794") AnnotationAssertion( "FMA:256541") AnnotationAssertion( "MA:0001134") AnnotationAssertion( "NCIT:C33859") AnnotationAssertion( "TAO:0000702") AnnotationAssertion(Annotation( "BIRNLEX:2668") "UMLS:C0228569") AnnotationAssertion(Annotation( "ncithesaurus:Ventral_Horn_of_the_Spinal_Cord") "UMLS:C0228590") AnnotationAssertion( "VHOG:0001288") AnnotationAssertion( "ZFA:0000702") AnnotationAssertion(Annotation( "FMA:256541") "anterior gray column of spinal cord") AnnotationAssertion(Annotation( "FMA:256541") "anterior gray horn of spinal cord") AnnotationAssertion( "anterior grey column of spinal cord") AnnotationAssertion(Annotation( "BIRNLEX:2668") "anterior horn") AnnotationAssertion(Annotation( "FMA:256541") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "columna grisea anterior medullae spinalis") AnnotationAssertion(Annotation( "BIRNLEX:2668") "spinal cord anterior horn") AnnotationAssertion( "spinal cord ventral horn") AnnotationAssertion(Annotation( "FMA:256541") "ventral gray column of spinal cord") AnnotationAssertion(Annotation( "FMA:256541") "ventral gray matter of spinal cord") AnnotationAssertion( "ventral grey column of spinal cord") AnnotationAssertion(Annotation( "BIRNLEX:2668") "ventral grey horn") AnnotationAssertion(Annotation( "ZFA:0000702") "ventral horn spinal cord") AnnotationAssertion( "ventral region of spinal cord") AnnotationAssertion( "ventral spinal cord") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "anterior column") AnnotationAssertion(Annotation( ) "anterior column of the spinal cord") AnnotationAssertion(Annotation( ) "anterior horn (spinal cord)") AnnotationAssertion(Annotation( ) Annotation( ) "cornu anterius medullae spinalis") AnnotationAssertion(Annotation( "BAMS:VH") "ventral horn of the spinal cord") AnnotationAssertion(Annotation( "VHOG:0001288") Annotation( ) "ventral horns spinal cord") AnnotationAssertion( "UBERON:0002257") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "ventral horn of spinal cord") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA-abduced-lr"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (dorsal funiculus of spinal cord) AnnotationAssertion(Annotation( ) "The white substance of the spinal cord lying on either side between the posterior median sulcus and the dorsal root.") AnnotationAssertion( "ZFA class is undefined. We currently do not place this as part of the DCML pathway as this would lead to taxon constraint violations.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:77461") AnnotationAssertion( "TAO:0000501") AnnotationAssertion( "ZFA:0000501") AnnotationAssertion(Annotation( "ZFA:0000501") "dorsal funiculus") AnnotationAssertion( "dorsal funiculus of spinal cord") AnnotationAssertion(Annotation( "FMA:77461") "dorsal white column of spinal cord") AnnotationAssertion(Annotation( "ZFA:0000501") "funiculus dorsalis") AnnotationAssertion(Annotation( "FMA:77461") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "funiculus posterior medullae spinalis") AnnotationAssertion( "posterior funiculus") AnnotationAssertion( "posterior funiculus of spinal cord") AnnotationAssertion(Annotation( "FMA:77461") "posterior white column of spinal cord") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002258") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "dorsal funiculus of spinal cord") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/d/dc/Medulla_spinalis_-_Section_-_English.svg"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "FMA-abduced-lr"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (corpora quadrigemina) AnnotationAssertion(Annotation( ) Annotation( "BTO:0001710") "Either of the two pairs of colliculi on the dorsal surface of the midbrain composed of white matter externally and gray matter within, the superior pair containing correlation centers for optic reflexes and the inferior pair containing correlation centers for auditory reflexes[BTO].") AnnotationAssertion( "this section needs worked on for pan-vertebrate consistency. for now we include a mammal specific definition, even though the child terms are applicable across vertebrates") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0001710") AnnotationAssertion( "DHBA:12375") AnnotationAssertion( "EMAPA:36556") AnnotationAssertion( "EV:0100244") AnnotationAssertion( "FMA:242157") AnnotationAssertion( "GAID:574") AnnotationAssertion( "MA:0002567") AnnotationAssertion( "MESH:A08.186.211.132.659.237") AnnotationAssertion( "NCIT:C12461") AnnotationAssertion(Annotation( "ncithesaurus:Corpora_Quadrigemina") "UMLS:C0010087") AnnotationAssertion(Annotation( "MP:0000899") "colliculi") AnnotationAssertion( "corpora quadrigemina") AnnotationAssertion( "quadrigeminal body") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:242157") "set of colliculi") AnnotationAssertion( "UBERON:0002259") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "corpora quadrigemina") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/7/77/Gray709.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (ventral root of spinal cord) AnnotationAssertion(Annotation( "NLXANAT:20090209") "The ventral roots contain efferent motor axons. Similar to the dorsal roots, the ventral roots continue out from the spinal column, and meet and mix with their corresponding dorsal nerve root at a point after the ganglion.") AnnotationAssertion(Annotation( ) "The efferent motor root of a spinal nerve. At its distal end, the ventral root joins with the dorsal root to form a mixed spinal nerve[Wikipedia:Anterior_root_of_spinal_nerve].") AnnotationAssertion(Annotation( "FMA"^^xsd:string) "FMA:77516 xref is a 'general anatomical term'. We xref both to ensure equivalence.") AnnotationAssertion(Annotation( "NLXANAT:20090209") "ventral root") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:vr") AnnotationAssertion( "BAMS:vrt") AnnotationAssertion( "BTO:0000865") AnnotationAssertion( "FMA:5979") AnnotationAssertion( "FMA:77516") AnnotationAssertion( "NCIT:C33860") AnnotationAssertion( "NLXANAT:20090209") AnnotationAssertion( "TAO:0000705") AnnotationAssertion(Annotation( "ncithesaurus:Ventral_Nerve_Root") "UMLS:C0205956") AnnotationAssertion( "ZFA:0000705") AnnotationAssertion(Annotation( "BTO:0000865") "anterior spinal root") AnnotationAssertion( "ventral spinal root") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "anterior nerve root") AnnotationAssertion(Annotation( ) "anterior root") AnnotationAssertion(Annotation( "FMA:5979") "anterior root of spinal nerve") AnnotationAssertion(Annotation( "FMA:5979") "motor root of spinal nerve") AnnotationAssertion(Annotation( "BTO:0000865") "motor spinal root") AnnotationAssertion(Annotation( "FMA:5979") "radix anterior (nervus spinalis)") AnnotationAssertion(Annotation( ) Annotation( ) "radix anterior nervi spinalis") AnnotationAssertion(Annotation( "FMA:5979") "radix motoria (nervus spinalis)") AnnotationAssertion(Annotation( "BTO:0000865") "root motoria nervi spinalis") AnnotationAssertion(Annotation( "BTO:0000865") "root ventralis nervi spinalis") AnnotationAssertion( "spinal nerve ventral root") AnnotationAssertion(Annotation( "FMA:5979") "ventral root of spinal nerve") AnnotationAssertion(Annotation( "BAMS:vrt") "ventral roots") AnnotationAssertion(Annotation( "FMA:5979") "ventral spinal nerve root") AnnotationAssertion( "UBERON:0002260") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "ventral root of spinal cord") AnnotationAssertion( "Spinal:nerve.svg"^^xsd:anyURI) SubClassOf(Annotation( "ZFA") Annotation( "FMA"^^xsd:string) ) # Class: (dorsal root of spinal cord) AnnotationAssertion(Annotation( "NLXANAT:20090208") "The dorsal roots contain afferent sensory axons. The dorsal roots of each side continue outwards, along the way forming a dorsal root ganglion (also called a spinal ganglion).") AnnotationAssertion(Annotation( ) "In anatomy and neurology, the dorsal root (or posterior root) is the afferent sensory root of a spinal nerve. At the distal end of the dorsal root is the dorsal root ganglion, which contains the neuron cell bodies of the nerve fibres conveyed by the root. If the dorsal root of a spinal nerve were severed it would lead to numbness in certain areas of the body. The lateral division of the dorsal root contains lightly myelinated and unmyelinated axons of small diameter. These transmit pain and temperature sensation from the body. These fibers cross through the anterior white commissure to form the Anterior lateral system in the lateral funiculus. The medial division of the dorsal root contains myelinated axons of larger diameter. These transmit information of discriminative touch, pressure, vibration, and conscious proprioception originating from spinal levels C2 through S5. These fibers are pushed in towards the posterior medial sulcus to form the fasciculus gracilis and the fasciculus cuneatus. [WP,unvetted][Wikipedia:Posterior_root_of_spinal_nerve].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:drt") AnnotationAssertion( "BTO:0000360") AnnotationAssertion( "FMA:5980") AnnotationAssertion( "NCIT:C32477") AnnotationAssertion( "NLXANAT:20090208") AnnotationAssertion( "TAO:0000652") AnnotationAssertion(Annotation( "ncithesaurus:Dorsal_Root_of_the_Spinal_Nerve") "UMLS:C0205955") AnnotationAssertion( "ZFA:0000652") AnnotationAssertion(Annotation( "ZFA:0000652") "dorsal root") AnnotationAssertion(Annotation( "FMA:5980") "dorsal root of spinal nerve") AnnotationAssertion(Annotation( "FMA:5980") "dorsal spinal nerve root") AnnotationAssertion( "dorsal spinal root") AnnotationAssertion(Annotation( ) "posterior root of spinal nerve") AnnotationAssertion(Annotation( "ZFA:0000652") "radix dorsalis") AnnotationAssertion(Annotation( "FMA:5980") "radix posterior (nervus spinalis)") AnnotationAssertion(Annotation( "FMA:5980") "radix sensoria (nervus spinalis)") AnnotationAssertion(Annotation( "FMA:5980") "sensory root of spinal nerve") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BAMS:drt") "dorsal roots") AnnotationAssertion(Annotation( ) Annotation( ) "radix posterior") AnnotationAssertion(Annotation( "BTO:0000360") "radix posterior nervi spinalis") AnnotationAssertion(Annotation( "BTO:0000360") "root dorsali nervi spinalis") AnnotationAssertion(Annotation( "BTO:0000360") "root sensoria nervi spinalis") AnnotationAssertion(Annotation( "BTO:0000360") "sensory spinal root") AnnotationAssertion( "UBERON:0002261") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "dorsal root of spinal cord") AnnotationAssertion( "Spinal:nerve.svg"^^xsd:anyURI) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (celiac ganglion) AnnotationAssertion(Annotation( ) "The celiac ganglia are two large irregularly shaped masses of nerve tissue in the upper abdomen. Part of the sympathetic subdivision of the autonomic nervous system (ANS), the two celiac ganglia are the largest ganglia in the ANS, and they innervate most of the digestive tract. They have the appearance of lymph glands and are placed on either side of the midline in front of the crura of the diaphragm, close to the suprarenal glands (also called adrenal glands). The ganglion on the right side is placed behind the inferior vena cava. They are sometimes referred to as the semilunar ganglia or the solar ganglia. [WP,unvetted].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:GCE") AnnotationAssertion( "EHDAA2:0000266") AnnotationAssertion( "EHDAA:8946") AnnotationAssertion( "EMAPA:19321") AnnotationAssertion( "FMA:77570") AnnotationAssertion( "MA:0001158") AnnotationAssertion( "NCIT:C52830") AnnotationAssertion(Annotation( "ncithesaurus:Coeliac_Ganglion") "UMLS:C0007571") AnnotationAssertion(Annotation( "FMA:77570") "coeliac ganglion") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002262") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "celiac ganglion") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/6/63/Gray848.png"^^xsd:anyURI) SubClassOf(Annotation( "MA"^^xsd:string) ) # Class: (lentiform nucleus) AnnotationAssertion(Annotation( ) "The lentiform nucleus or lenticular nucleus comprises the putamen and the globus pallidus within the basal ganglia. It is a large, cone-shaped mass of gray matter just lateral to the internal capsule. [WP,unvetted].") AnnotationAssertion( "TODO - add parts") AnnotationAssertion(Annotation( "EMAPA"^^xsd:string) "the EMAPA class is unclear") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0002250") AnnotationAssertion( "EMAPA:18208") AnnotationAssertion( "EMAPA:19147") AnnotationAssertion( "EV:0100186") AnnotationAssertion( "FMA:77615") AnnotationAssertion( "MA:0000896") AnnotationAssertion( "NCIT:C32977") AnnotationAssertion( "OpenCyc:Mx4rvvyH2ZwpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Lenticular_Nucleus") "UMLS:C0162342") AnnotationAssertion(Annotation( "BTO:0002250") "nucleus lenticularis") AnnotationAssertion(Annotation( "BTO:0002250") "nucleus lentiformis") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0002250") "lenticular nucleus") AnnotationAssertion(Annotation( ) Annotation( ) "nucleus lentiformis") AnnotationAssertion( "UBERON:0002263") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "lentiform nucleus") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/f/fc/Gray741.png"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "MA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (olfactory bulb) AnnotationAssertion(Annotation( ) Annotation( "BTO:0000961") "A bulbous anterior projection of the olfactory lobe that is the place of termination of the olfactory nerves and is especially well developed in lower vertebrates (as fishes)[BTO].") AnnotationAssertion(Annotation( "ISBN:0471888893"^^xsd:string) "Part of the rostral part of the cerebrum where axons of olfactory cells from the nasal mucosa terminate. Projects onto olfactory parts of pallium via olfactory tracts") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0010165") Annotation( "AAO"^^xsd:string) Annotation( "AAO:BJB"^^xsd:string) "Part of the telencephalon comprised of anterior outgrowths of either of the cerebral hemispheres in which the olfactory nerve exits.[AAO]") AnnotationAssertion(Annotation( "FMA:77624") "Segment of neural tree organ which is continuous with a set of olfactory nerves and an olfactory tract[FMA:77624].") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000033") Annotation( "VHOG"^^xsd:string) Annotation( ) "The part of the forebrain in which the olfactory nerves end and the olfactory tracts originate. [Dorian_AF, Elsevier's_encyclopaedic_dictionary_of_medicine, Part_B:_Anatomy_(1988)_Amsterdam_etc.:_Elsevier][VHOG]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000033") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "DOI:10.1146/annurev.ne.04.030181.001505 Northcutt RG, Evolution of the telencephalon in nonmammals. Ann. Rev. Neurosci. (1981)") "The presence of paired evaginated hemispheres and olfactory bulbs in both agnathan and gnathostome radiations suggests that such hemispheres were also present in the common ancestor.[well established][VHOG]") AnnotationAssertion(Annotation( "WP"^^xsd:string) "In most vertebrates, the olfactory bulb is the most rostral (forward) part of the brain. In humans, however, the olfactory bulb is on the inferior (bottom) side of the brain. The olfactory bulb is supported and protected by the cribriform plate which in mammals, separates it from the olfactory epithelium, and which is perforated by olfactory nerve axons. The bulb is divided into two distinct structures, the main olfactory bulb, and the accessory olfactory bulb") AnnotationAssertion( "Note that in uberon 'main olfactory bulb' is a separate class, but some ontologies may treat this as partially synonymous. The distinction may only make sense in tetrapods with a vomeronasal organ (olfactory nerves terminate in OB in fishes and in main OB in tetrapods - Butler and Hodos)") AnnotationAssertion( "the olfactory bulbs develop as bilateral evaginations from a region of the prosencephalic neural plate intercalated between the septal and the cortical anlagen (Cobos et al. 2001b, Rubenstein et al. 1998). Comparing the structure of the olfactory bulb among vertebrate species, such as the leopard frog and the lab mouse, reveals that they all share the same fundamental layout(WP).") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010165") AnnotationAssertion( "BAMS:DLB") AnnotationAssertion( "BAMS:OB") AnnotationAssertion( "BAMS:Olf") AnnotationAssertion( "BIRNLEX:1137") AnnotationAssertion( "BM:Tel-OB") AnnotationAssertion( "BTO:0000961") AnnotationAssertion( "CALOHA:TS-0702") AnnotationAssertion( "DHBA:10307") AnnotationAssertion( "EHDAA2:0004705") AnnotationAssertion( "EMAPA:32809") AnnotationAssertion( "EV:0100173") AnnotationAssertion( "FMA:77624") AnnotationAssertion( "GAID:633") AnnotationAssertion( "HBA:9303") AnnotationAssertion( "MA:0000194") AnnotationAssertion( "MESH:A08.186.211.577.699.573") AnnotationAssertion( "NCIT:C28401") AnnotationAssertion( "TAO:0000402") AnnotationAssertion(Annotation( "BIRNLEX:1137") "UMLS:C0028936") AnnotationAssertion(Annotation( "ncithesaurus:Olfactory_Bulb") "UMLS:C0028936") AnnotationAssertion( "VHOG:0000033") AnnotationAssertion( "XAO:0004180") AnnotationAssertion( "ZFA:0000402") AnnotationAssertion(Annotation( "BIRNLEX:1137") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=279") AnnotationAssertion(Annotation( ) "bulbus olfactorius") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "bulbus olfactorius") AnnotationAssertion(Annotation( "NeuroNames:279") Annotation( ) "bulbus olfactorius (Morgagni)") AnnotationAssertion(Annotation( "ZFA:0000402") "olfactory lobe") AnnotationAssertion(Annotation( "NeuroNames:279") "olfactory lobe (Barr & Kiernan)") AnnotationAssertion( "UBERON:0002264") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "olfactory bulb") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/d/d2/1543%2CVesalius%27OlfactoryBulbs.jpg"^^xsd:anyURI) AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/f/f9/1543,Vesalius%27OlfactoryBulbs.jpg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "ZFA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "ISBN:0471888893"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses(Annotation( "NIFSTD"^^xsd:string) ) # Class: (olfactory tract) AnnotationAssertion(Annotation( ) Annotation( ) Annotation( "BIRNLEX:1663") Annotation( "ISBN:0471888893"^^xsd:string) "White matter tract that contains projections from the olfactory bulb to other parts of the brain.") AnnotationAssertion(Annotation( "BTO:0003647") "A nervelike, white band composed primarily of nerve fibres originating from the mitral cells and tufted cells of the olfactory bulb but also containing the scattered cells of the anterior olfactory nucleus[BTO:0003647].") AnnotationAssertion(Annotation( ) "The olfactory tract is a bundle of axons connecting the mitral and tufted cells of the olfactory bulb to several target regions in the brain, including piriform cortex, amygdala, and entorhinal cortex. It is a narrow white band, triangular on coronal section, the apex being directed upward. It lies in the olfactory sulcus on the inferior surface of the frontal lobe, and divides posteriorly into two striæ, a medial olfactory stria and a lateral olfactory stria.[Wikipedia].") AnnotationAssertion(Annotation( "FMA"^^xsd:string) "Tract of brain which is continuous with olfactory bulb and the cerebral cortex.[FMA]") AnnotationAssertion(Annotation( "deprecated class") Annotation( "BIRNLEX:1663") "White matter tract that contains projections from the olfactory bulb to the olfactory cortex (Maryann Martone)") AnnotationAssertion( "in animals with a long snout, the olfactory tract is long, whereas it is short in short-snouted animals such as primates. In some birds the tract per se does not exist as the bulb is connected directly to the cerebral hemisphere.[ISBN:0471888893]") AnnotationAssertion(Annotation( "cjm") Annotation( "ISBN:0471888893"^^xsd:string) "The definition was adapted from the NIFSTD class which has been retired. It has been generalized so it is applicable to various different kinds of olfactory tracts found in different taxa.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:olf") AnnotationAssertion( "BIRNLEX:1663") AnnotationAssertion( "BTO:0003647") AnnotationAssertion( "DHBA:12073") AnnotationAssertion( "DHBA:12074") AnnotationAssertion( "EMAPA:35615") AnnotationAssertion( "FMA:77626") AnnotationAssertion( "HBA:9302") AnnotationAssertion( "MA:0000975") AnnotationAssertion( "NCIT:C33207") AnnotationAssertion(Annotation( "ncithesaurus:Olfactory_Tract") "UMLS:C0162435") AnnotationAssertion(Annotation( "BIRNLEX:1663") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=283") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0003647") "olfactory peduncle") AnnotationAssertion(Annotation( "NeuroNames:283") "olfactory stalk") AnnotationAssertion(Annotation( "NeuroNames:283") Annotation( ) "pedunclulus olfactorius") AnnotationAssertion(Annotation( "NeuroNames:283") Annotation( ) "tractus olfactorium") AnnotationAssertion(Annotation( ) Annotation( ) "tractus olfactorius") AnnotationAssertion(Annotation( "BTO:0003647") "tractus olfactorius") AnnotationAssertion( "UBERON:0002265") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "olfactory tract") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/4/4d/Gray732.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) # Class: (anterior olfactory nucleus) AnnotationAssertion(Annotation( "BIRNLEX:1085") "Laminated structure lying caudal to the olfactory bulb.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:AO") AnnotationAssertion( "BAMS:AON") AnnotationAssertion( "BIRNLEX:1085") AnnotationAssertion( "BM:Tel-OAN") AnnotationAssertion( "BTO:0003649") AnnotationAssertion( "DHBA:10308") AnnotationAssertion( "EMAPA:35131") AnnotationAssertion( "EV:0100174") AnnotationAssertion( "FMA:77628") AnnotationAssertion( "HBA:4324") AnnotationAssertion( "MA:0000968") AnnotationAssertion( "MBA:159") AnnotationAssertion( "NCIT:C52710") AnnotationAssertion(Annotation( "BIRNLEX:1085") "UMLS:C0175225") AnnotationAssertion(Annotation( "ncithesaurus:Anterior_Olfactory_Nucleus") "UMLS:C0175225") AnnotationAssertion(Annotation( "BIRNLEX:1085") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=280") AnnotationAssertion(Annotation( "FMA:77628") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "nucleus retrobulbaris [a8]") AnnotationAssertion( "retrobulbar nucleus [a8]") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0003649") "AON") AnnotationAssertion(Annotation( "BTO:0003649") "anterior olfactory cortex") AnnotationAssertion(Annotation( "NeuroNames:280") Annotation( ) "area retrobulbaris") AnnotationAssertion(Annotation( ) Annotation( ) "nucleus olfactorius anterior") AnnotationAssertion(Annotation( "NeuroNames:280") Annotation( ) "regio retrobulbaris") AnnotationAssertion(Annotation( "NeuroNames:280") "retrobulbar region") AnnotationAssertion( "UBERON:0002266") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "anterior olfactory nucleus") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/b/b1/Human_brainstem_anterior_view_2_description.JPG"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses(Annotation( "NIFSTD"^^xsd:string) ) # Class: (laterodorsal tegmental nucleus) AnnotationAssertion(Annotation( ) "The laterodorsal tegmental nucleus (or lateroposterior tegmental nucleus) is a nucleus situated in the brainstem, spanning the midbrain tegmentum and the pontine tegmentum. [WP,unvetted].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:LDT") AnnotationAssertion( "BAMS:LDTg") AnnotationAssertion( "BTO:0004016") AnnotationAssertion( "DHBA:12519") AnnotationAssertion( "DMBA:16964") AnnotationAssertion( "EMAPA:35490") AnnotationAssertion( "FMA:77654") AnnotationAssertion( "MA:0001016") AnnotationAssertion( "MBA:162") AnnotationAssertion( "lateroposterior tegmental nucleus") AnnotationAssertion(Annotation( "FMA:77654") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "nucleus tegmentalis posterolateralis") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BAMS:LDT") "anterodorsal tegmental nucleus") AnnotationAssertion(Annotation( ) Annotation( ) "nucleus tegmentalis posterolateralis") AnnotationAssertion( "UBERON:0002267") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "laterodorsal tegmental nucleus") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "MA"^^xsd:string) ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) # Class: (olfactory organ) AnnotationAssertion(Annotation( "UBERON:cjm"^^xsd:string) "An organ that houses olfactory neurons and is responsible for the sense of smell. Examples include the vertebrate nose and the Drosophila dorsal organ.") AnnotationAssertion( "An olfactory organ overlaps with the olfactory system, because some parts of the nose (e.g. nasal skeleton) are parts of the skeletal system, which is spatially disjoint") AnnotationAssertion( "fma general anatomical term. xao has no subtypes (but Johnstons organ develops from this). An olfactory organ overlaps with the olfactory system, because some parts of the nose (e.g. nasal skeleton) are parts of the skeletal system, which is spatially disjoint") AnnotationAssertion( "AAO:0010180") AnnotationAssertion( "BTO:0001772") AnnotationAssertion( "FBbt:00005158") AnnotationAssertion( "FMA:77659") AnnotationAssertion( "VHOG:0000287") AnnotationAssertion( "XAO:0000273") AnnotationAssertion(Annotation( "BTO:0001772") "olfactory organ") AnnotationAssertion( "olfactory sense organ") AnnotationAssertion(Annotation( "FBbt:00005158") "olfactory sensory organ") AnnotationAssertion( "main olfactory organ") AnnotationAssertion( "primary olfactory organ") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0001772") "olfactory neuroepithelium") AnnotationAssertion(Annotation( "BTO:0001772") "organ olfactus") AnnotationAssertion(Annotation( "BTO:0001772") "organum olfactorium") AnnotationAssertion( "UBERON:0002268") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "olfactory organ") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) # Class: (pupillary membrane) AnnotationAssertion(Annotation( ) "The pupillary membrane in mammals exists in the fetus as a source of blood supply for the lens. It normally atrophies from the time of birth to the age of four to eight weeks.") AnnotationAssertion( ) AnnotationAssertion( "FMA:77663") AnnotationAssertion( "MA:0001293") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002269") AnnotationAssertion(rdfs:label "pupillary membrane") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "MA-modified"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (hyaloid artery) AnnotationAssertion(Annotation( ) "An artery that is part of the optic stalk of the eye and extends from the optic disc through the vitreous humor to the lens.") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0005045") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "Artery that is internal to the eye. Isogai et al. 2001.[TAO]") AnnotationAssertion( "In humans, Usually fully regressed before birth, its purpose is to supply nutrient to the developing lens in the growing fetus. During the tenth week of development the lens grows independent of a blood supply and the hyaloid artery usually regresses. Its proximal portion remains as the central artery of the retina. Regression of the hyaloid artery leaves a clear central zone through the vitreous called the hyaloid canal or Cloquet's canal. Occasionally the artery may not fully regress, resulting in the condition persistent hyaloid artery. More commonly, small remnants of the artery may remain. Free remnants can sometimes be seen as 'floaters'. An anterior remnant of the hyaloid artery can be seen in some people as Mittendorf's dot, a small pinpoint-like scar on the posterior surface of the lens. A posterior remnant may be seen where the artery left the optic disc, and is known as Bergmeister's papilla") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0004072") AnnotationAssertion( "EMAPA:19242") AnnotationAssertion( "FMA:77670") AnnotationAssertion( "TAO:0005045") AnnotationAssertion( "VHOG:0001478") AnnotationAssertion( "XAO:0004155") AnnotationAssertion( "ZFA:0005045") AnnotationAssertion(Annotation( ) Annotation( ) "arteria hyaloidea") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "Cloquet's canal") AnnotationAssertion(Annotation( ) "Cloquets canal") AnnotationAssertion(Annotation( "EMAPA:19242") "central artery of retina") AnnotationAssertion(Annotation( "ZFA:0005045") Annotation( ) "hyaloid arteries") AnnotationAssertion( "UBERON:0002270") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "hyaloid artery") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/1/1e/Schematic_diagram_of_the_human_eye_en.svg"^^xsd:anyURI) SubClassOf(Annotation( "ZFA"^^xsd:string) ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "Wikipedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "ZFA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (periventricular zone of hypothalamus) AnnotationAssertion( ) AnnotationAssertion( "BAMS:PVZ") AnnotationAssertion( "EMAPA:35421") AnnotationAssertion( "FMA:77682") AnnotationAssertion( "MA:0000846") AnnotationAssertion( "MBA:157") AnnotationAssertion( "VHOG:0000623") AnnotationAssertion( "hypothalamus periventricular zone") AnnotationAssertion(Annotation( "FMA:77682") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "zona periventricularis hypothalamicae") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BAMS:PVZ") "periventricular zone of the hypothalamus") AnnotationAssertion( "UBERON:0002271") AnnotationAssertion(rdfs:label "periventricular zone of hypothalamus") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (medial zone of hypothalamus) AnnotationAssertion( ) AnnotationAssertion( "BAMS:MEZ") AnnotationAssertion( "BAMS:MZ") AnnotationAssertion( "EMAPA:35419") AnnotationAssertion( "FMA:77683") AnnotationAssertion( "MA:0000837") AnnotationAssertion( "MBA:467") AnnotationAssertion( "hypothalamus medial zone") AnnotationAssertion(Annotation( "FMA:77683") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "zona medialis hypothalamicae") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BAMS:MEZ") "hypothalamic medial zone behavioral control column") AnnotationAssertion(Annotation( "BAMS:MEZ") "medial zone of the hypothalamus") AnnotationAssertion(Annotation( "BAMS:MZ") "medial zone of the hypothalamus") AnnotationAssertion( "UBERON:0002272") AnnotationAssertion(rdfs:label "medial zone of hypothalamus") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses(Annotation( "lexical"^^xsd:string) ) # Class: (lateral zone of hypothalamus) AnnotationAssertion( ) AnnotationAssertion( "BAMS:LZ") AnnotationAssertion( "EMAPA:35418") AnnotationAssertion( "FMA:77684") AnnotationAssertion( "MA:0000833") AnnotationAssertion( "MBA:290") AnnotationAssertion( "hypothalamus lateral zone") AnnotationAssertion(Annotation( "FMA:77684") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "zona lateralis hypothalamicae") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BAMS:LZ") "hypothalamic lateral zone") AnnotationAssertion(Annotation( "BAMS:LZ") "lateral zone of the hypothalamus") AnnotationAssertion( "UBERON:0002273") AnnotationAssertion(rdfs:label "lateral zone of hypothalamus") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (perifornical nucleus) AnnotationAssertion( ) AnnotationAssertion( "BAMS:PeF") AnnotationAssertion( "DHBA:11578") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37716") AnnotationAssertion( "FMA:77688") AnnotationAssertion( "HBA:12917") AnnotationAssertion( "MA:0000836") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002274") AnnotationAssertion(rdfs:label "perifornical nucleus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (reticular formation) AnnotationAssertion(Annotation( "NeuroNames:1223") "A composite substructure of the brainstem that consists of the midbrain reticular formation, the pontine reticular formation and the medullary reticular formation ( Carpenter-1983 ).") AnnotationAssertion( "this class denotes the generic structure, and not a specific one such as medullary or pontine reticular formation.") AnnotationAssertion( "It is essential for governing some of the basic functions of higher organisms, and is one of the phylogenetically oldest portions of the brain.") AnnotationAssertion(Annotation( "FMA"^^xsd:string) "FMA has a spinal cord reticular formation but we follow NNs (classical) to restrict this to brainstem structures. This means we also include the MA class for brainstem reticular formation here. FMA has subtypes of reticular formation but we treat this as a composite structure") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:RET") AnnotationAssertion( "EMAPA:35188") AnnotationAssertion( "FMA:77719") AnnotationAssertion( "MA:0003185") AnnotationAssertion( "MESH:D012154") AnnotationAssertion( "NLX:143558") AnnotationAssertion(Annotation( "NeuroNames:1223") "brain stem reticular formation") AnnotationAssertion(Annotation( "MA:0003185") "brainstem reticular formation") AnnotationAssertion(Annotation( "NeuroNames:1223") "brainstem reticular formation") AnnotationAssertion(Annotation( "NeuroNames:1223") "reticular formation (classical)") AnnotationAssertion(Annotation( "NeuroNames:1223") "reticular formation of the brainstem") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002275") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "reticular formation") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/9/9b/Gray701.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lamina of spiral limbus) AnnotationAssertion(Annotation( ) "The osseous spiral lamina consists of two plates of bone, and between these are the canals for the transmission of the filaments of the acoustic nerve. On the upper plate of that part of the lamina which is outside the vestibular membrane, the periosteum is thickened to form the limbus spiralis (or limbus laminæ spiralis), this ends externally in a concavity, the sulcus spiralis internus, which represents, on section, the form of the letter C. [WP,unvetted].") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:35496") AnnotationAssertion( "FMA:77721") AnnotationAssertion( "MA:0001191") AnnotationAssertion(Annotation( "MA:0001191") "limbus lamina spiralis") AnnotationAssertion(Annotation( "FMA:77721") "limbus laminae spiralis") AnnotationAssertion( "limbus laminae spiralis osseae") AnnotationAssertion(Annotation( "FMA:77721") "spiral limbus lamina") AnnotationAssertion( "uberon") AnnotationAssertion( "spiral limbus") AnnotationAssertion( "UBERON:0002276") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "lamina of spiral limbus") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/a/a5/Gray930.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "MA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (spiral sulcus) AnnotationAssertion(Annotation( ) "A concavity in the floor of the cochlear duct, formed by either the overhanging vestibular lip (inner spiral sulcus) or the spiral prominence and the spiral organ (outer spiral sulcus).") AnnotationAssertion( "EMAPA:35800") AnnotationAssertion( "FMA:77744") AnnotationAssertion( "MA:0001195") AnnotationAssertion( "sulcus spiralis") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002277") AnnotationAssertion(rdfs:label "spiral sulcus") SubClassOf( ) SubClassOf(Annotation( "MA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (perilymphatic space) AnnotationAssertion(Annotation( "Dorlands_Medical_Dictionary:MerckSource") "The fluid-filled space separating the membranous from the osseous labyrinth.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0002083") AnnotationAssertion( "FMA:77745") AnnotationAssertion( "ZFA:0005459") AnnotationAssertion( "uberon") AnnotationAssertion( "Retzius space") AnnotationAssertion(Annotation( ) "cisterna perilymphatica") AnnotationAssertion(Annotation( ) "spatium perilymphaticum") AnnotationAssertion( "UBERON:0002278") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "perilymphatic space") SubClassOf( ) SubClassOf(Annotation( "ZFA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (vestibular aqueduct) AnnotationAssertion(Annotation( ) "At the hinder part of the medial wall of the vestibule is the orifice of the vestibular aqueduct, which extends to the posterior surface of the petrous portion of the temporal bone. It transmits a small vein, and contains a tubular prolongation of the membranous labyrinth, the ductus endolymphaticus, which ends in a cul-de-sac between the layers of the dura mater within the cranial cavity. [WP,unvetted].") AnnotationAssertion( ) AnnotationAssertion( "FMA:77821") AnnotationAssertion( "GAID:885") AnnotationAssertion( "MA:0001186") AnnotationAssertion( "MESH:D014723") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "aqueductus vestibuli") AnnotationAssertion( "UBERON:0002279") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "vestibular aqueduct") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/1/16/Gray921.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (otolith) AnnotationAssertion(Annotation( ) Annotation( "ZFIN:curator"^^xsd:string) "Acellular structure composed of calcium carbonate located in the otolith organ.") AnnotationAssertion( "Currently represented as part of the otolith membrane, but they may also be considered to be embedded in this membrane") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0001621") Annotation( "TAO"^^xsd:string) Annotation( "TAO:wd"^^xsd:string) "Portion of organism substance composed of calcium carbonate located in the otolith organ.[TAO]") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0001621") Annotation( "TAO"^^xsd:string) "relationship loss: develops_from immature otolith (TAO:0000139)[TAO]") AnnotationAssertion( "otoconial") AnnotationAssertion( "otolithic") AnnotationAssertion( "Mammals have many tiny otoconia and fish have three large otoliths[ZFIN:df]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "ANISEED:777311") AnnotationAssertion( "ANISEED:874485") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37924") AnnotationAssertion( "FMA:77826") AnnotationAssertion( "NCIT:C33230") AnnotationAssertion( "TAO:0001621") AnnotationAssertion(Annotation( "ncithesaurus:Otolith") "UMLS:C0029894") AnnotationAssertion( "ZFA:0001617") AnnotationAssertion( "otoconium") AnnotationAssertion(Annotation( ) "otoliths") AnnotationAssertion( "statoconium") AnnotationAssertion( "uberon") AnnotationAssertion( "immature otolith") AnnotationAssertion( "immature otoliths") AnnotationAssertion(Annotation( ) "otoconia") AnnotationAssertion(Annotation( "MP:0002894") "otoconial crystal") AnnotationAssertion(Annotation( ) "statoconia") AnnotationAssertion( "statolith") AnnotationAssertion( "UBERON:0002280") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "otolith") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/c/cb/Bigotolith.jpg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "MP"^^xsd:string) Annotation( "Wikipedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (vestibular membrane of cochlear duct) AnnotationAssertion(Annotation( ) "A membrane inside the cochlea of the inner ear. It separates scala media from scala vestibuli. Together with the basilar membrane it creates a compartment in the cochlea filled with endolymph, which is important for the function of the organ of Corti. It primarily functions as a diffusion barrier, allowing nutrients to travel from the perilymph to the endolymph of the membranous labyrinth. Histologically, the membrane is composed of two layers of flattened epithelium, separated by a basal lamina. Its structure suggests that its function is transport of fluid and electrolytes.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:35922") AnnotationAssertion( "FMA:77829") AnnotationAssertion( "MA:0001200") AnnotationAssertion( "NCIT:C33083") AnnotationAssertion( "Reissner membrane") AnnotationAssertion(Annotation( "FMA:77829") "Reissner's membrane") AnnotationAssertion(Annotation( "MP:0006021") "membrana vestibularis ductus cochlearis") AnnotationAssertion(Annotation( "MP:0006021") "paries vestibularis ductus cochlearis") AnnotationAssertion(Annotation( "FMA:77829") "superior wall of cochlear duct") AnnotationAssertion(Annotation( "MA:0001200") "vestibular membrane") AnnotationAssertion(Annotation( "FMA:77829") "vestibular membrane of Reissner") AnnotationAssertion(Annotation( "MP:0006021") "vestibular wall of cochlear duct") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "MP:0006021") "vestibular membrane") AnnotationAssertion( "UBERON:0002281") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "vestibular membrane of cochlear duct") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/0/0c/Cochlea-crosssection.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (stria vascularis of cochlear duct) AnnotationAssertion(Annotation( ) "The upper portion of the spiral ligament contains numerous capillary loops and small blood vessels, and is termed the stria vascularis. It produces endolymph for the scala media, one of the three fluid-filled compartments of the cochlea. [WP,unvetted].") AnnotationAssertion(Annotation( "FMA"^^xsd:string) "represented as a wall in FMA. MESH def implies part of spiral ligament but better represented as adjacency / overlaps") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:2525") AnnotationAssertion( "BTO:0001819") AnnotationAssertion( "CALOHA:TS-0982") AnnotationAssertion( "EFO:0001644") AnnotationAssertion( "EMAPA:35827") AnnotationAssertion( "FMA:77832") AnnotationAssertion( "GAID:875") AnnotationAssertion( "MA:0001198") AnnotationAssertion( "MESH:D013316") AnnotationAssertion(Annotation( "BIRNLEX:2525") "UMLS:C0229477") AnnotationAssertion(Annotation( "MP:0000048") "psalterial cord") AnnotationAssertion( "stria vascularis") AnnotationAssertion(Annotation( "FMA:77832") "stria vascularis of cochlea") AnnotationAssertion(Annotation( "MP:0000048") "vascular stripe of cochlear duct") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0001819") Annotation( ) "stria vascularis ductus cochlearis") AnnotationAssertion(Annotation( "BTO:0001819") "vascular stria of cochlear duct") AnnotationAssertion( "UBERON:0002282") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "stria vascularis of cochlear duct") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/c/c7/Cochlea-crosssection.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) Annotation( "MA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (nail matrix) AnnotationAssertion(Annotation( ) "Portion of tissue (or germinal matrix) upon which the nail rests, the part of the nail bed that extends beneath the nail root and contains nerves, lymph and blood vessels. The matrix is responsible for the production of the cells that become the nail plate. The width and thickness of the nail plate is determined by the size, length, and thickness of the matrix, while the shape of the fingertip itself determines if the nail plate is flat, arched, or hooked. The matrix will continue to grow as long as it receives nutrition and remains in a healthy condition. As new nail plate cells are incubated, they emerge from the matrix round and white to push older nail plate cells forward; and in this way yet older cells become compressed, flat, and translucent, making the pink colour of the capillaries in the nail bed below visible[WP].") AnnotationAssertion( "EMAPA:35582") AnnotationAssertion( "FMA:77856") AnnotationAssertion( "MA:0002707") AnnotationAssertion(Annotation( ) "keratogenous membrane") AnnotationAssertion(Annotation( ) Annotation( ) "matrix unguis") AnnotationAssertion(Annotation( ) "nail germinal matrix") AnnotationAssertion(Annotation( ) "onychostroma") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "nail root") AnnotationAssertion( "UBERON:0002283") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "nail matrix") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (hyponychium) AnnotationAssertion(Annotation( ) "Epithelium located beneath the nail plate at the junction between the free edge and the skin of the fingertip. It forms a seal that protects the nail bed.") AnnotationAssertion(Annotation( ) "Extended in mouse compared to human") AnnotationAssertion( "secures the nail to the finger tip") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37508") AnnotationAssertion( "FMA:77860") AnnotationAssertion( "MA:0002705") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002284") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "hyponychium") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (telencephalic ventricle) AnnotationAssertion(Annotation( ) Annotation( ) "A brain ventricle that is part of a telencephalon. In mammals and species with an evaginated telencephalon, this is one of a pair of lateral structures, one in each hemisphere.") AnnotationAssertion(Annotation( ) "The lateral ventricles are part of the ventricular system of the brain. Classified as part of the telencephalon, they are the largest of the ventricles. The lateral ventricles connect to the central third ventricle through the interventricular foramina of Monro[WP].") AnnotationAssertion(Annotation( "GO:0021670") "The two lateral ventricles are a cavity in each of the cerebral hemispheres derived from the cavity of the embryonic neural tube. They are separated from each other by the septum pellucidum, and each communicates with the third ventricle by the foramen of Monro, through which also the choroid plexuses of the lateral ventricles become continuous with that of the third ventricle[GO].") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000643") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0878932504 Gilbert SF, Developmental Biology (2006) p.381-382, ISBN:978-0030223693 Liem KF, Bemis WE, Walker WF, Grande L, Functional Anatomy of the Vertebrates: An Evolutionary Perspective (2001) p.500") "The early development of most vertebrate brains is similar (...). The zebrafish neural tube follows the same basic differentiation pattern as the mammalian neural tube (reference 1); The brain develops from three embryonic enlargements of the neural tube, which later differentiate into five regions. A forebrain differentiates into telencephalon and diencephalon. The midbrain, or mesencephalon, remains undivided. The hindbrain divides into the metencephalon and myelencephalon. Cavities within the brain enlarge to form a series of interconnected ventricles (reference 2).[well established][VHOG]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:LV") AnnotationAssertion( "BAMS:Tel-V") AnnotationAssertion( "BIRNLEX:1263") AnnotationAssertion( "BM:Tel-LV") AnnotationAssertion( "BTO:0000879") AnnotationAssertion( "CALOHA:TS-1230") AnnotationAssertion( "DHBA:10596") AnnotationAssertion( "DMBA:126651562") AnnotationAssertion( "EFO:0001961") AnnotationAssertion( "EHDAA2:0001984") AnnotationAssertion( "EHDAA:3502") AnnotationAssertion( "EHDAA:6576") AnnotationAssertion( "EMAPA:16914") AnnotationAssertion( "EV:0100307") AnnotationAssertion( "FMA:78448") AnnotationAssertion( "GAID:611") AnnotationAssertion( "HBA:9419") AnnotationAssertion( "MA:0000192") AnnotationAssertion( "MBA:81") AnnotationAssertion( "MESH:D020547") AnnotationAssertion( "NCIT:C12834") AnnotationAssertion( "OpenCyc:Mx4rvYsFdZwpEbGdrcN5Y29ycA") AnnotationAssertion( "TAO:0000696") AnnotationAssertion(Annotation( "BIRNLEX:1263") "UMLS:C0152279") AnnotationAssertion(Annotation( "ncithesaurus:Lateral_Ventricle") "UMLS:C0152279") AnnotationAssertion( "VHOG:0000643") AnnotationAssertion( "ZFA:0000696") AnnotationAssertion(Annotation( "MA:0000192") Annotation( ) "lateral ventricle") AnnotationAssertion(Annotation( ) "lateral ventricles") AnnotationAssertion(Annotation( "VHOG:0000643") Annotation( "ZFA:0000696") "telencephalic ventricle") AnnotationAssertion(Annotation( "EHDAA2:0001984") "telencephalon lateral ventricle") AnnotationAssertion( "uberon") AnnotationAssertion( "forebrain ventricle") AnnotationAssertion(Annotation( "BTO:0000879") "lateral ventricle of brain") AnnotationAssertion( "tectal ventricle") AnnotationAssertion(Annotation( "BAMS:Tel-V") "telencephalic ventricles") AnnotationAssertion(Annotation( "ZFA:0000696") "telencephalic vesicle") AnnotationAssertion( "UBERON:0002285") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "modeled as space in EHDAA2") AnnotationAssertion(rdfs:label "telencephalic ventricle") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/7/7d/Gray734.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "material to immaterial") Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (third ventricle) AnnotationAssertion(Annotation( "BIRNLEX:714") "Part of the ventricular system of the brain, forming a single large cavity in the midline of the diencephalon; it is continuous with the lateral ventricles through the interventricular foramen and the fourth ventricle through the cerebral aqueduct. (Maryann Martone).") AnnotationAssertion( "consider adding class for secondary vesicle precursor") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0000161") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "Fluid-filled brain cavity. Kimmel et al, 1995.[TAO]") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0000161") Annotation( "TAO"^^xsd:string) "relationship loss: develops_from forebrain ventricle (TAO:0001259)[TAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000007") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0878932504 Gilbert SF, Developmental Biology (2006) p.381-382, ISBN:978-0030223693 Liem KF, Bemis WE, Walker WF, Grande L, Functional Anatomy of the Vertebrates: An Evolutionary Perspective (2001) p.500") "The early development of most vertebrate brains is similar (...). The zebrafish neural tube follows the same basic differentiation pattern as the mammalian neural tube (reference 1); The brain develops from three embryonic enlargements of the neural tube, which later differentiate into five regions. A forebrain differentiates into telencephalon and diencephalon. The midbrain, or mesencephalon, remains undivided. The hindbrain divides into the metencephalon and myelencephalon. Cavities within the brain enlarge to form a series of interconnected ventricles (reference 2).[well established][VHOG]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:3V") AnnotationAssertion( "BAMS:V3") AnnotationAssertion( "BIRNLEX:714") AnnotationAssertion( "BM:Die-3V") AnnotationAssertion( "CALOHA:TS-2058") AnnotationAssertion( "DHBA:10602") AnnotationAssertion( "EHDAA2:0000084") AnnotationAssertion( "EMAPA:16900") AnnotationAssertion( "EV:0100308") AnnotationAssertion( "FMA:78454") AnnotationAssertion( "GAID:614") AnnotationAssertion( "HBA:9420") AnnotationAssertion( "MA:0000182") AnnotationAssertion( "MBA:129") AnnotationAssertion( "MESH:D020542") AnnotationAssertion( "NCIT:C12827") AnnotationAssertion( "OpenCyc:Mx4rvakhcJwpEbGdrcN5Y29ycA") AnnotationAssertion( "TAO:0000161") AnnotationAssertion(Annotation( "BIRNLEX:714") "UMLS:C0149555") AnnotationAssertion(Annotation( "ncithesaurus:Third_Ventricle_of_Brain") "UMLS:C0149555") AnnotationAssertion( "VHOG:0000007") AnnotationAssertion( "ZFA:0000161") AnnotationAssertion( "3rd ventricle") AnnotationAssertion(Annotation( "ZFA:0000161") "ventriculus diencephali") AnnotationAssertion( "diencephalic vesicle") AnnotationAssertion( "uberon") AnnotationAssertion( "diencephalic ventricle") AnnotationAssertion(Annotation( ) Annotation( ) "ventriculus tertius cerebri") AnnotationAssertion( "UBERON:0002286") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "third ventricle") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/7/7d/Gray734.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (optic recess of third ventricle) AnnotationAssertion(Annotation( "NLX:144280") "Recess in third ventricle lying in front of the optic chiasm at the base of the lamina terminalis.") AnnotationAssertion( "TODO - check taxonomic grouping") AnnotationAssertion(Annotation( ) "At the junction of the floor and anterior wall of the third ventricle, immediately above the optic chiasma, the ventricle presents a small angular recess or diverticulum, the optic recess (or supraoptic recess). [WP,unvetted][Wikipedia:Optic_recess].") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000595") Annotation( "VHOG"^^xsd:string) Annotation( ) "The optic recess of the third ventricle, i.e. the pouch of the ventricle penetrating into the interval between the initial optic tracts. [Dorian_AF, Elsevier's_encyclopaedic_dictionary_of_medicine, Part_B:_Anatomy_(1988)_Amsterdam_etc.:_Elsevier][VHOG]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:ORe") AnnotationAssertion( "EHDAA2:0001317") AnnotationAssertion( "EHDAA:1343") AnnotationAssertion( "EHDAA:1973") AnnotationAssertion( "EHDAA:2649") AnnotationAssertion( "EHDAA:3478") AnnotationAssertion( "EMAPA:16902") AnnotationAssertion( "FMA:78455") AnnotationAssertion( "NLX:144280") AnnotationAssertion( "TAO:0000049") AnnotationAssertion( "VHOG:0000595") AnnotationAssertion( "ZFA:0000049") AnnotationAssertion( "optic recess") AnnotationAssertion( "preoptic recess") AnnotationAssertion(Annotation( "FMA:78455") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "recessus supraopticus") AnnotationAssertion( "supraoptic recess") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "VHOG:0000595") "optic recesses") AnnotationAssertion( "preoptic recess") AnnotationAssertion( "recessus opticus") AnnotationAssertion( "recessus praeopticus") AnnotationAssertion(Annotation( ) Annotation( ) "recessus supraopticus") AnnotationAssertion( "supraoptic recess") AnnotationAssertion( "UBERON:0002287") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "optic recess of third ventricle") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/f/fa/Gray721.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (choroid plexus of third ventricle) AnnotationAssertion(Annotation( "NLX:18606") "Part of choroid plexus contained in the third ventricle.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:chp3") AnnotationAssertion( "BAMS:cp3v") AnnotationAssertion( "EMAPA:18543") AnnotationAssertion( "FMA:78462") AnnotationAssertion( "HBA:9709") AnnotationAssertion( "MA:0000879") AnnotationAssertion( "NCIT:C49782") AnnotationAssertion( "NLX:18606") AnnotationAssertion( "TAO:0001444") AnnotationAssertion(Annotation( "ncithesaurus:Choroid_Plexus_of_the_Third_Ventricle") "UMLS:C0152291") AnnotationAssertion( "VHOG:0001374") AnnotationAssertion( "ZFA:0001444") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "chorioid plexus of cerebral hemisphere of third ventricle") AnnotationAssertion( "chorioid plexus of third ventricle") AnnotationAssertion(Annotation( "ZFA:0001444") "choroid plexus third ventricle") AnnotationAssertion(Annotation( "ZFA:0001444") "diencephalic choroid plexus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "third ventricle chorioid plexus of cerebral hemisphere") AnnotationAssertion( "third ventricle choroid plexus") AnnotationAssertion( "uberon") AnnotationAssertion( "3rd ventricle choroid plexus") AnnotationAssertion( "UBERON:0002288") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "choroid plexus of third ventricle") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (midbrain cerebral aqueduct) AnnotationAssertion(Annotation( "BIRNLEX:1261") "Part of ventricular system of brain consisting of a narrow channel in the midbrain connecting the third and fourth ventricles. (Maryann Martone).") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000832") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0878932504 Gilbert SF, Developmental Biology (2006) p.381-382, ISBN:978-0030223693 Liem KF, Bemis WE, Walker WF, Grande L, Functional Anatomy of the Vertebrates: An Evolutionary Perspective (2001) p.500") "The early development of most vertebrate brains is similar (...). The zebrafish neural tube follows the same basic differentiation pattern as the mammalian neural tube (reference 1); The brain develops from three embryonic enlargements of the neural tube, which later differentiate into five regions. A forebrain differentiates into telencephalon and diencephalon. The midbrain, or mesencephalon, remains undivided. The hindbrain divides into the metencephalon and myelencephalon. Cavities within the brain enlarge to form a series of interconnected ventricles (reference 2).[well established][VHOG]") AnnotationAssertion(Annotation( "ncit"^^xsd:string) "Two distinct classes in ncit. We classify this as a brain ventricle even though it is not classifically regarded as one (3rd = diencephalon, 4th = hindbrains)") AnnotationAssertion( "UBERON:0005684") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:AQ") AnnotationAssertion( "BAMS:Aq") AnnotationAssertion( "BIRNLEX:1261") AnnotationAssertion( "BM:MB-AQ") AnnotationAssertion( "DHBA:10651") AnnotationAssertion( "DHBA:12369") AnnotationAssertion( "DMBA:126651722") AnnotationAssertion( "EFO:0003501") AnnotationAssertion( "EHDAA2:0001163") AnnotationAssertion( "EHDAA:3696") AnnotationAssertion( "EMAPA:17795") AnnotationAssertion( "EV:0100309") AnnotationAssertion( "FMA:78467") AnnotationAssertion( "GAID:583") AnnotationAssertion( "HBA:265505702") AnnotationAssertion( "MA:0000208") AnnotationAssertion( "MBA:140") AnnotationAssertion( "MESH:A08.186.211.132.659.822.187") AnnotationAssertion( "NCIT:C32135") AnnotationAssertion( "TAO:0000159") AnnotationAssertion(Annotation( "BIRNLEX:1261") "UMLS:C0007769") AnnotationAssertion(Annotation( "ncithesaurus:Aqueduct_of_Sylvius") "UMLS:C0007769") AnnotationAssertion( "VHOG:0000832") AnnotationAssertion( "ZFA:0000159") AnnotationAssertion( "ncithesaurus:Cerebral_Aqueduct") AnnotationAssertion(Annotation( ) "Sylvian aqueduct") AnnotationAssertion( "aqueduct (Sylvius)") AnnotationAssertion( "aqueduct of Sylvius") AnnotationAssertion( "aqueduct of midbrain") AnnotationAssertion(Annotation( "FMA:78467") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "aqueductus mesencephali") AnnotationAssertion(Annotation( "ZFA:0000159") "cerebral aquaduct") AnnotationAssertion(Annotation( "MA:0000208") "cerebral aqueduct") AnnotationAssertion( "cerebral aqueduct of Sylvius") AnnotationAssertion(Annotation( "ZFA:0000159") Annotation( ) "medial tectal ventricle") AnnotationAssertion(Annotation( ) "mesencephalic duct") AnnotationAssertion(Annotation( "ZFA:0000159") Annotation( ) "mesencephalic ventricle") AnnotationAssertion(Annotation( "EHDAA2:0001163") "midbrain cerebral aqueduct") AnnotationAssertion(Annotation( "ZFA:0000159") Annotation( ) "midbrain ventricle") AnnotationAssertion(Annotation( "ZFA:0000159") Annotation( ) "tectal ventricle") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BAMS:AQ") "aqueduct") AnnotationAssertion(Annotation( "BAMS:AQ") "aqueduct of Sylvius") AnnotationAssertion(Annotation( ) Annotation( ) "aqueductus mesencephali") AnnotationAssertion(Annotation( "BAMS:AQ") "cerebral aqueduct proper") AnnotationAssertion(Annotation( "ZFA:0000159") Annotation( ) "mesencephalic vesicle") AnnotationAssertion( "UBERON:0002289") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "midbrain cerebral aqueduct") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/d/da/Cn3nucleus.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (choroid plexus of fourth ventricle) AnnotationAssertion(Annotation( "NLX:27388") "Choroid plexus of the fourth ventricle.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:chp4") AnnotationAssertion( "BAMS:cp4v") AnnotationAssertion( "DHBA:12808") AnnotationAssertion( "EMAPA:32742") AnnotationAssertion( "FMA:78492") AnnotationAssertion( "HBA:9710") AnnotationAssertion( "MA:0000983") AnnotationAssertion( "NCIT:C32308") AnnotationAssertion( "NLX:27388") AnnotationAssertion( "TAO:0001446") AnnotationAssertion(Annotation( "ncithesaurus:Choroid_Plexus_of_the_Fourth_Ventricle") "UMLS:C0152293") AnnotationAssertion( "VHOG:0001375") AnnotationAssertion( "ZFA:0001446") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "chorioid plexus of cerebral hemisphere of fourth ventricle") AnnotationAssertion( "chorioid plexus of fourth ventricle") AnnotationAssertion(Annotation( "ZFA:0001446") "choroid plexus fourth ventricle") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "fourth ventricle chorioid plexus of cerebral hemisphere") AnnotationAssertion( "fourth ventricle choroid plexus") AnnotationAssertion( "uberon") AnnotationAssertion( "4th ventricle choroid plexus") AnnotationAssertion( "UBERON:0002290") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "choroid plexus of fourth ventricle") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (central canal of spinal cord) AnnotationAssertion(Annotation( ) Annotation( "ZFIN:curator"^^xsd:string) "Spinal cord structure that is part of the ventricular system and is filled with cerebral-spinal fluid and runs the length of the spinal cord.") AnnotationAssertion( "UBERON:0002220") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:C") AnnotationAssertion( "BAMS:CC") AnnotationAssertion( "BIRNLEX:1409") AnnotationAssertion( "DHBA:146035108") AnnotationAssertion( "DMBA:126652042") AnnotationAssertion( "EHDAA2:0004361") AnnotationAssertion( "EMAPA:35789") AnnotationAssertion( "FMA:78497") AnnotationAssertion( "HBA:9422") AnnotationAssertion( "MA:0001117") AnnotationAssertion( "MBA:164") AnnotationAssertion( "NCIT:C12891") AnnotationAssertion( "TAO:0000938") AnnotationAssertion(Annotation( "ncithesaurus:Central_Canal") "UMLS:C0459414") AnnotationAssertion( "ZFA:0000938") AnnotationAssertion(Annotation( "ZFA:0000938") "canalis centralis") AnnotationAssertion(Annotation( "ZFA:0000938") "central canal") AnnotationAssertion( "central canal of spinal cord") AnnotationAssertion( "spinal cord central canal") AnnotationAssertion(Annotation( "FMA:78497") "ventricle of spinal cord") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BAMS:C") "central canal, spinal cord/medulla") AnnotationAssertion( "UBERON:0002291") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "previously mapped to FMA:75364. Note some ontologies (NIF, SNOMED) subdivide this into lumbar, thoracic, etc. Note we follow FMA in distinguishing between the canal and the lumen") AnnotationAssertion(rdfs:label "central canal of spinal cord") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/d/dc/Medulla_spinalis_-_Section_-_English.svg"^^xsd:anyURI) SubClassOf(Annotation( "cjm"^^xsd:string) ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "MA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (costovertebral joint) AnnotationAssertion(Annotation( ) "The costovertebral joints are the articulations that connect the heads of the ribs with the bodies of the thoracic vertebrae. Joining of ribs to the vertebrae occurs at two places, the head and the tubercle of the rib. Two convex facets from the head attach to two adjacent vertebrae. This forms a trochoid joint, which is strengthened by the ligament of the head and the intercapital ligament. Articulation of the tubercle is to the transverse process of the adjacent vertebrae. This articulation is reinforced by the dorsal costotransverse ligament. [WP,unvetted].") AnnotationAssertion(Annotation( "FMA"^^xsd:string) "FMA has both this and joint of head of rib") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:19020") AnnotationAssertion( "FMA:10382") AnnotationAssertion( "MA:0001510") AnnotationAssertion( "NCIT:C32394") AnnotationAssertion(Annotation( "ncithesaurus:Costovertebral_Joint") "UMLS:C0224681") AnnotationAssertion(Annotation( "FMA:10382") "costovertebral synovial joint") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:7951") "costal head joint") AnnotationAssertion(Annotation( "FMA:7951") "costocorporeal joint") AnnotationAssertion(Annotation( "FMA:7951") "joint of costal head") AnnotationAssertion(Annotation( "FMA:7951") "joint of head of rib") AnnotationAssertion( "UBERON:0002292") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "costovertebral joint") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/c/c7/Gray312.png"^^xsd:anyURI) SubClassOf(Annotation( "MA"^^xsd:string) ) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (costochondral joint) AnnotationAssertion(Annotation( ) Annotation( "HP:0000920") "A bars of hyaline cartilage located between the distal part of a rib and a costal cartilage, connecting the ribs to the sternum .") AnnotationAssertion( "In humans, Joints between costal cartilages of ribs 6-9 are plane synovial joints. Articulation between costal cartilage of rib 9 and rib 10 is fibrous") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:36490") AnnotationAssertion( "FMA:7956") AnnotationAssertion( "MA:0001509") AnnotationAssertion( "NCIT:C32392") AnnotationAssertion( "OpenCyc:Mx4rvfy27JwpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Costochondral_Joint") "UMLS:C0224683") AnnotationAssertion(Annotation( "FMA:7956") Annotation( "FMA:TA"^^xsd:string) "articulatio costochondralis") AnnotationAssertion(Annotation( "FMA:7956") "chondrocostal synchondrosis") AnnotationAssertion(Annotation( "FMA:7956") Annotation( "HP:0000920") "costochondral junction") AnnotationAssertion(Annotation( "FMA:7956") "costochondral synchondrosis") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "articulationes costochondrales") AnnotationAssertion( "UBERON:0002293") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "costochondral joint") SubClassOf(Annotation( "MA"^^xsd:string) ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (biliary system) AnnotationAssertion(Annotation( ) "Organ system subdivision that consists of the organs and ducts that are involved in the production and transportation of bile. In most species this is the gallbladder and the bile ducts (biliary tree).") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:79646") AnnotationAssertion( "GAID:279") AnnotationAssertion( "MA:0001273") AnnotationAssertion( "MESH:D001659") AnnotationAssertion( "NCIT:C12678") AnnotationAssertion(Annotation( "FMA:79646") "biliary apparatus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:79646") Annotation( "MA:0001273") "biliary tract") AnnotationAssertion( "UBERON:0002294") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "biliary system") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/5/5d/Digestive_system_showing_bile_duct.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses( ) DisjointClasses( ) DisjointClasses( ) DisjointClasses( ) DisjointClasses( ) DisjointClasses( ) # Class: (scala media) AnnotationAssertion(Annotation( ) Annotation( "MGI:anna"^^xsd:string) Annotation( "MP:0003169") "The division of the spiral canal of the cochlea that contains the organ of Corti (the neuroepithelial receptor organ for hearing).") AnnotationAssertion( "TODO - check cochlear duct vs cochlear aqueduct vs scala media") AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0000262") AnnotationAssertion( "EMAPA:35751") AnnotationAssertion( "FMA:79789") AnnotationAssertion( "MA:0002458") AnnotationAssertion( "uberon") AnnotationAssertion( "cochlear duct") AnnotationAssertion( "UBERON:0002295") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "located in between the scala tympani and the scala vestibuli, separated by the basilar membrane and Reissner's membrane (the vestibular membrane) respectively. Scala media houses the organ of Corti. [Wikipedia:Scala_media]") AnnotationAssertion(rdfs:label "scala media") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/b/bc/Gray928.png"^^xsd:anyURI) SubClassOf(Annotation( "MA"^^xsd:string) ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (dorsal mesentery) AnnotationAssertion(Annotation( ) Annotation( ) Annotation( "ZFIN:curator"^^xsd:string) "The mesentery that originates from the dorsal side of the peritoneal cavity[ZFA].") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0005130") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "The mesentery that originates from the dorsal side of the peritoneal cavity.[TAO]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0004560") AnnotationAssertion( "EHDAA:3019") AnnotationAssertion( "EHDAA:3033") AnnotationAssertion( "EHDAA:3921") AnnotationAssertion( "EHDAA:3934") AnnotationAssertion( "EHDAA:3957") AnnotationAssertion( "EHDAA:3971") AnnotationAssertion( "FMA:79795") AnnotationAssertion( "TAO:0005130") AnnotationAssertion( "ZFA:0005130") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "dorsal mesogastrium") AnnotationAssertion(Annotation( ) Annotation( ) "mesenterium dorsale commune") AnnotationAssertion( "UBERON:0002296") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "dorsal mesentery") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/8/85/Gray985.png"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (cerumen) AnnotationAssertion(Annotation( "MESH:A12.200.147") "The yellow or brown waxy secretions produced by vestigial apocrine sweat glands in the external ear canal[MESH].") AnnotationAssertion( "cerumenal") AnnotationAssertion( "cerumenous") AnnotationAssertion( "Cerumen keeps the eardrum pliable, lubricates and cleans the external auditory canal, waterproofs the canal, kills bacteria, and serves as a barrier to trap foreign particles (dust, fungal spores, etc.) by coating the guard hairs of the ear, making them sticky.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "ENVO:02000028") AnnotationAssertion( "FMA:79869") AnnotationAssertion( "GAID:1158") AnnotationAssertion( "MA:0002506") AnnotationAssertion( "MESH:D002571") AnnotationAssertion( "NCIT:C32293") AnnotationAssertion(Annotation( "ncithesaurus:Cerumen") "UMLS:C0740486") AnnotationAssertion( "ear wax") AnnotationAssertion( "earwax") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002297") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "cerumen") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (brainstem) AnnotationAssertion(Annotation( ) Annotation( "ISBN:0471888893"^^xsd:string) Annotation( "MP:0005277") Annotation( "ZFA:0001707") "Stalk-like part of the brain that includes amongst its parts the medulla oblongata of the hindbrain and the tegmentum of the midbrain[ZFA,MP,generalized].") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0002156") Annotation( "TAO"^^xsd:string) Annotation( "ISBN:3764351209") "Multi-tissue structure that has as its parts the medulla oblongata of the hindbrain and the tegmentum of the midbrain.[TAO]") AnnotationAssertion(Annotation( "ZFA:0001707") "Multi-tissue structure that has as its parts the medulla oblongata of the hindbrain and the tegmentum of the midbrain[ZFA,adopted][ZFA:0001707].") AnnotationAssertion(Annotation( "MP:0005277") "the stalk-like part of the brain that comprises the midbrain (aka mesencephalon), the pons (aka pons Varolii), and the medulla oblongata, and connects the cerebral hemispheres with the cervical spinal cord[MP]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:BS") AnnotationAssertion( "BIRNLEX:1565") AnnotationAssertion( "BTO:0000146") AnnotationAssertion( "CALOHA:TS-0093") AnnotationAssertion( "EFO:0001962") AnnotationAssertion( "EMAPA:32678") AnnotationAssertion( "EV:0100241") AnnotationAssertion( "FMA:79876") AnnotationAssertion( "MA:0000169") AnnotationAssertion( "MBA:343") AnnotationAssertion( "MESH:D001933") AnnotationAssertion( "NCIT:C12441") AnnotationAssertion( "TAO:0002156") AnnotationAssertion(Annotation( "BIRNLEX:1565") "UMLS:C0006121") AnnotationAssertion(Annotation( "ncithesaurus:Brain_Stem") "UMLS:C0006121") AnnotationAssertion( "VHOG:0001457") AnnotationAssertion( "ZFA:0001707") AnnotationAssertion(Annotation( "BIRNLEX:1565") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=236") AnnotationAssertion(Annotation( "ABA:BS") "brain stem") AnnotationAssertion(Annotation( ) Annotation( ) "truncus encephali") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:236") "accessory medullary lamina of pallidum") AnnotationAssertion(Annotation( "NeuroNames:236") Annotation( ) "lamella pallidi incompleta") AnnotationAssertion(Annotation( "NeuroNames:236") Annotation( ) "lamina medullaris accessoria") AnnotationAssertion(Annotation( "NeuroNames:236") Annotation( ) "lamina medullaris incompleta pallidi") AnnotationAssertion(Annotation( "NeuroNames:236") Annotation( ) "lamina pallidi incompleta") AnnotationAssertion(Annotation( "BTO:0000146") Annotation( ) "truncus encephalicus") AnnotationAssertion( "UBERON:0002298") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "'brainstem' is a loose term that sometimes refers to the ventral parts o the brain except for any part of the telencephalon - sometimes it includes the diencephalon or subpallial telencephalon structures (ISBN:0471888893). Here we use it in a more restriced sense, to include only the medulla oblongata, pons (when present) and the midbrain tegmentum (following the ZFA definitions).") AnnotationAssertion(rdfs:label "brainstem") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/b/b7/Gray719.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (alveolus of lung) AnnotationAssertion(Annotation( ) "Spherical outcropping of the respiratory bronchioles and primary site of gas exchange with the blood. Alveoli are particular to mammalian lungs. Different structures are involved in gas exchange in other vertebrates[WP].") AnnotationAssertion( "alveolus") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0000060") AnnotationAssertion( "CALOHA:TS-0031") AnnotationAssertion( "EFO:0001985") AnnotationAssertion( "EMAPA:32682") AnnotationAssertion( "EV:0100043") AnnotationAssertion( "FMA:7318") AnnotationAssertion( "GAID:349") AnnotationAssertion( "MA:0000420") AnnotationAssertion( "MESH:D011650") AnnotationAssertion( "VHOG:0001445") AnnotationAssertion(Annotation( ) "alveolus pulmonis") AnnotationAssertion( "lung alveolus") AnnotationAssertion(Annotation( "FMA:7318") "pulmonary alveolus") AnnotationAssertion( "respiratory alveolus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0000060") Annotation( ) "alveoli") AnnotationAssertion(Annotation( ) Annotation( ) "alveolus pulmonis") AnnotationAssertion(Annotation( ) "respiratory alveoli") AnnotationAssertion( "UBERON:0002299") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "alveolus of lung") AnnotationAssertion( "Alveolus:diagram.svg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete ventricle) AnnotationAssertion(Annotation( ) "A chamber of an organ with cavitated organ parts. Examples: right ventricle of heart, lateral ventricle of brain.") AnnotationAssertion( "FMA:82553") AnnotationAssertion( ) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002300") AnnotationAssertion(rdfs:label "obsolete ventricle") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (layer of neocortex) AnnotationAssertion(Annotation( ) Annotation( ) Annotation( "ISBN-10:0-87893-742-0") "One of the layers of the neocortex. These layers are defined by distinctive populations of cells based on somata size, shape, or density, that are aligned into sheets.") AnnotationAssertion( "cortical layer") AnnotationAssertion( "ABA:CTX1-6b") AnnotationAssertion( "EMAPA:35588") AnnotationAssertion( "FMA:83138") AnnotationAssertion( "MA:0000186") AnnotationAssertion(Annotation( "FMA:83138") "layer of neocortex") AnnotationAssertion(Annotation( "MA:0000186") "neocortex layer") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "MA:0000186") "cerebral cortex layer") AnnotationAssertion(Annotation( "FMA:83138") "lamina of neocortex") AnnotationAssertion( "UBERON:0002301") AnnotationAssertion(rdfs:label "layer of neocortex") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (myocardium of atrium) AnnotationAssertion(Annotation( "ISBN:0-683-40008-8"^^xsd:string) Annotation( "MP:0010493") "The atrial part of middle layer of the heart, comprised of involuntary muscle.") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000602") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0072528305 Kardong KV, Vertebrates: Comparative Anatomy, Function, Evolution (2006) p.481") "As noted, the hearts of birds and mammals have four chambers that arises from the two chambers (atrium and ventricle) of the fish heart.[uncertain][VHOG]") AnnotationAssertion( ) AnnotationAssertion( "EFO:0003087") AnnotationAssertion( "EMAPA:32746") AnnotationAssertion( "FMA:83509") AnnotationAssertion( "MA:0000081") AnnotationAssertion( "TAO:0001374") AnnotationAssertion( "VHOG:0000602") AnnotationAssertion( "ZFA:0001374") AnnotationAssertion(Annotation( "ZFA:0001374") "atrial myocardium") AnnotationAssertion( "atrium myocardium") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "VHOG:0000602") "atrium cardiac muscle") AnnotationAssertion( "UBERON:0002302") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "myocardium of atrium") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (juxtaglomerular apparatus) AnnotationAssertion(Annotation( ) Annotation( "GO:0072206") "An anatomical structure which consists of juxtaglomerular cells, extraglomerular mesangial cells and the macula densa. The juxtaglomerular apparatus lies adjacent to the glomerulus and regulates kidney function by maintaining the blood flow to the kidney and the filtration rate[GO]. a microscopic structure in the kidney, which regulates the function of each nephron. The juxtaglomerular apparatus is named for its proximity to the glomerulus: it is found between the vascular pole of the renal corpuscle and the returning distal convoluted tubule of the same nephron. This location is critical to its function in regulating renal blood flow and glomerular filtration rate. The three cellular components of the apparatus are the macula densa, extraglomerular mesangial cells, and juxtaglomerular cells (also known as granular cells)[WP].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0005157") AnnotationAssertion( "EMAPA:30449") AnnotationAssertion( "FMA:83599") AnnotationAssertion( "GAID:432") AnnotationAssertion( "MA:0002546") AnnotationAssertion( "MESH:D007606") AnnotationAssertion( "NCIT:C32891") AnnotationAssertion(Annotation( "ncithesaurus:Juxtaglomerular_Apparatus") "UMLS:C0022445") AnnotationAssertion(Annotation( ) "complexus juxtaglomerularis") AnnotationAssertion(Annotation( "MP:0002829") "juxtaglomerular complex") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002303") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "juxtaglomerular apparatus") SubClassOf( ) SubClassOf(Annotation( "MA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (layer of dentate gyrus) AnnotationAssertion(Annotation( ) Annotation( "PMCID:PMC2492885") "One of the three layers of the dentate gyrus of the hippocampal formation.") AnnotationAssertion( "the basic trilaminar structure of the dentate gyrus is common across all species studied, with relatively minimal phylogenetic variation[PMC2492885]") AnnotationAssertion( "EMAPA:35278") AnnotationAssertion( "FMA:83678") AnnotationAssertion( "MA:0002429") AnnotationAssertion( "dentate gyrus cell layer") AnnotationAssertion( "dentate gyrus layer") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002304") AnnotationAssertion(rdfs:label "layer of dentate gyrus") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (layer of hippocampus) AnnotationAssertion(Annotation( ) Annotation( "MP:0000813") "The layers of the laminar structure of the hippocampus.") AnnotationAssertion( "TODO - check NIF xref") AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:1192") AnnotationAssertion( "EMAPA:35407") AnnotationAssertion( "FMA:277842") AnnotationAssertion( "FMA:83679") AnnotationAssertion( "MA:0002427") AnnotationAssertion(Annotation( "BIRNLEX:1192") "cytoarchitectural fields of hippocampal formation") AnnotationAssertion( "hippocampus layer") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:83679") "hippocampus proper layer") AnnotationAssertion(Annotation( "FMA:83679") "layer of cornu ammonis") AnnotationAssertion( "UBERON:0002305") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "layer of hippocampus") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (nasal mucus) AnnotationAssertion(Annotation( ) "Mucus produced in the nasal cavity, by the respiratory segment of the nasal mucosa.") AnnotationAssertion( "TODO - split nasal vs respiratory tract?") AnnotationAssertion( "protects the olfactory epithelium and allows odors to dissolve so that they can be detected by olfactory receptor neurons") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0003603") AnnotationAssertion( "CALOHA:TS-0658") AnnotationAssertion( "EMAPA:36552") AnnotationAssertion( "FMA:83688") AnnotationAssertion( "MA:0002535") AnnotationAssertion( "NCIT:C52551") AnnotationAssertion(Annotation( "ncithesaurus:Nasal_Mucus") "UMLS:C0225392") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0003603") "respiratory mucus") AnnotationAssertion( "UBERON:0002306") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "nasal mucus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (choroid plexus of lateral ventricle) AnnotationAssertion(Annotation( "NLX:32548") "Part of choroid plexus contained in the lateral ventricle.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:cplv") AnnotationAssertion( "DHBA:10601") AnnotationAssertion( "EHDAA2:0004449") AnnotationAssertion( "EMAPA:17769") AnnotationAssertion( "FMA:83711") AnnotationAssertion( "HBA:9708") AnnotationAssertion( "MA:0000961") AnnotationAssertion( "NCIT:C32309") AnnotationAssertion( "NLX:32548") AnnotationAssertion( "TAO:0001447") AnnotationAssertion(Annotation( "ncithesaurus:Choroid_Plexus_of_the_Lateral_Ventricle") "UMLS:C0152289") AnnotationAssertion( "VHOG:0001376") AnnotationAssertion( "ZFA:0001447") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "chorioid plexus of cerebral hemisphere of lateral ventricle") AnnotationAssertion( "chorioid plexus of lateral ventricle") AnnotationAssertion(Annotation( "ZFA:0001447") "choroid plexus telencephalic ventricle") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "lateral ventricle chorioid plexus of cerebral hemisphere") AnnotationAssertion( "lateral ventricle choroid plexus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002307") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "choroid plexus of lateral ventricle") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (nucleus of brain) AnnotationAssertion(Annotation( ) "A neural nucleus that is part of the brain.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:35185") AnnotationAssertion( "FMA:83840") AnnotationAssertion( "MA:0000811") AnnotationAssertion( "NCIT:C49346") AnnotationAssertion(Annotation( "ncithesaurus:Brain_Nucleus") "UMLS:C1706993") AnnotationAssertion( "ZFA:0005575") AnnotationAssertion( "brain nucleus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "ZFA:0005575") Annotation( ) "brain nuclei") AnnotationAssertion( "UBERON:0002308") AnnotationAssertion(rdfs:label "nucleus of brain") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (medial longitudinal fasciculus) AnnotationAssertion(Annotation( ) "The medial longitudinal fasciculus (MLF) is a pair of crossed fiber tracts, one on each side of the brainstem. These bundles of axons are situated near the midline of the brainstem and are composed of both ascending and descending fibers that arise from a number of sources and terminate in different areas. [WP,unvetted].") AnnotationAssertion(Annotation( "ZFA:0000543, ZFIN:ZDB-PUB-961014-1280") "The medial longitudinal fasciculus (MLF) is a pair of crossed fiber tracts (group of axons), that begin with in the nucleus of the MLF and run ventral to the rhombencephalic ventricle, towards the caudal end of the medulla oblongata. The dorsal portion of the MLF including the Mauthner axon continues into the spinal chord while the ventral portion of the MLF associates with other fiber systems in the funiculus ventralis prior to reaching the spinal chord. Throughout the most of its rhombencephalic extent the MLF is intersected by the ventral rhombencephalic commissure[ZFA].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:mlf") AnnotationAssertion( "BTO:0003951") AnnotationAssertion( "DHBA:12764") AnnotationAssertion( "FMA:83846") AnnotationAssertion( "HBA:9351") AnnotationAssertion( "MBA:62") AnnotationAssertion( "TAO:0000543") AnnotationAssertion( "ZFA:0000543") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "ZFA:0000543") "MLF") AnnotationAssertion(Annotation( ) Annotation( ) "fasciculus longitudinalis medialis") AnnotationAssertion(Annotation( "BAMS:mlf") "medial longitudinal fascicle") AnnotationAssertion( "UBERON:0002309") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "medial longitudinal fasciculus") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/2/26/Gray711.png"^^xsd:anyURI) SubClassOf( ) # Class: (hippocampus fimbria) AnnotationAssertion(Annotation( "BIRNLEX:1502") "Regional part of fornix consisting of a prominent white matter structure adjacent to the hippocampus on the ventricular side continuous with the alveus. Near the splenium the fimbria separates from the hippocampus as the crus of the fornix. [adapted from Wikipedia] (MM: 2006-10-26).") AnnotationAssertion(Annotation( "BIRNLEX:1502") "fimbria") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:FI") AnnotationAssertion( "BAMS:fi") AnnotationAssertion( "BIRNLEX:1502") AnnotationAssertion( "BM:Tel-FI") AnnotationAssertion( "DHBA:10575") AnnotationAssertion( "DMBA:17766") AnnotationAssertion( "EMAPA:35345") AnnotationAssertion( "FMA:83866") AnnotationAssertion( "HBA:9253") AnnotationAssertion( "MA:0000949") AnnotationAssertion( "MBA:603") AnnotationAssertion( "NCIT:C32606") AnnotationAssertion(Annotation( "BIRNLEX:1502") "UMLS:C0152315") AnnotationAssertion(Annotation( "ncithesaurus:Fimbria") "UMLS:C0152315") AnnotationAssertion(Annotation( "BIRNLEX:1502") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=187") AnnotationAssertion( "fimbria hippocampus") AnnotationAssertion(Annotation( "FMA:83866") "fimbria of hippocampus") AnnotationAssertion(Annotation( "BIRNLEX:1502") "fimbria of the fornix") AnnotationAssertion(Annotation( "BIRNLEX:1502") "fimbria-fornix") AnnotationAssertion(Annotation( "MP:0009324") "hippocampal fimbria") AnnotationAssertion( "neuraxis fimbria") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:187") "fimbria (Vieussens)") AnnotationAssertion(Annotation( "NeuroNames:187") Annotation( ) "fimbria fornicis") AnnotationAssertion(Annotation( ) Annotation( ) "fimbria hippocampi") AnnotationAssertion(Annotation( "NeuroNames:187") Annotation( ) "fimbria hippocampi") AnnotationAssertion(Annotation( "NeuroNames:187") "fimbria of fornix") AnnotationAssertion(Annotation( "NeuroNames:187") "fimbria of the hippocampus") AnnotationAssertion( "UBERON:0002310") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "hippocampus fimbria") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/6/6b/Gray749.png"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "Need to determine whether the fimbria is part of the fornix. Sometimes the language suggests it isn't always thought of that way, but I see no useful reason why it should be separate; it all forms one continuous white matter tract. Neuronames and others include this as part of the hippocampal formation (MM)") Annotation( "NIFSTD"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "MA"^^xsd:string) Annotation( "NIFSTD"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete nodulus of cerebellum) AnnotationAssertion( "UBERON:0004083") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002311") AnnotationAssertion(rdfs:comment "obsoleted based on http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=681") AnnotationAssertion(rdfs:label "obsolete nodulus of cerebellum") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (hippocampus pyramidal layer) AnnotationAssertion(Annotation( "BIRNLEX:1444") "A cytoarchitectural term denoting the layer of the hippocampus in which pyramidal cells are predominant. Its location is superficial to the Stratum oriens; it is deep to the Stratum radiatum in area CA1 and area CA2 and deep to the Stratum lucidum in area CA3 (Stephan-75) (NeuroNames).") AnnotationAssertion( "this layer changes in its depthwise spatial relation across its extent") AnnotationAssertion( "UBERON:0005369") AnnotationAssertion( ) AnnotationAssertion( "BAMS:Py") AnnotationAssertion( "BIRNLEX:1444") AnnotationAssertion( "BTO:0001066") AnnotationAssertion( "EMAPA:35409") AnnotationAssertion( "FMA:83895") AnnotationAssertion( "MA:0000956") AnnotationAssertion(Annotation( "BIRNLEX:1444") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=156") AnnotationAssertion(Annotation( "BIRNLEX:1444") "pyramidal cell layer of the hippocampus") AnnotationAssertion(Annotation( "FMA:83895") "pyramidal layer of hippocampus") AnnotationAssertion(Annotation( "BIRNLEX:1444") "stratum pyramidale") AnnotationAssertion(Annotation( "BIRNLEX:1444") "stratum pyramidale hippocampi") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:156") Annotation( ) "gyrus occipitalis inferior") AnnotationAssertion(Annotation( "NeuroNames:156") Annotation( ) "gyrus occipitalis tertius") AnnotationAssertion( "hippocampal pyramidal cell layer") AnnotationAssertion( "hippocampal pyramidal layer") AnnotationAssertion( "hippocampus pyramidal cell layer") AnnotationAssertion( "hippocampus stratum pyramidale") AnnotationAssertion( "UBERON:0002313") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "hippocampus pyramidal layer") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (midbrain tectum) AnnotationAssertion(Annotation( "BIRNLEX:1032") "Dorsal part of the midbrain, consisting of the superior and inferior colliculi and the pretectal nuclei (MM).") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001388") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "DOI:10.1371/journal.pone.0003582 Maximino C, Evolutionary Changes in the Complexity of the Tectum of Nontetrapods: A Cladistic Approach. PLoS ONE (2008)") "The tectum - a multisensory, topologically mapped structure in the roof of the midbrain presents a remarkable degree of conservation in all vertebrate radiations; although it varies in the extent of its development in different vertebrate classes, there is considerable evidence now to deem its layered structure, its cell types, and its hodological pattern as homologous in all vertebrates.[well established][VHOG]") AnnotationAssertion(Annotation( "WP"^^xsd:string) "In adult humans it is present only in the mesencephalon as the inferior and the superior colliculi") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:MTec") AnnotationAssertion( "BAMS:Tec") AnnotationAssertion( "BIRNLEX:1032") AnnotationAssertion( "BM:MB-Tec") AnnotationAssertion( "BTO:0001793") AnnotationAssertion( "DHBA:12291") AnnotationAssertion( "EFO:0000920") AnnotationAssertion( "EHDAA2:0004474") AnnotationAssertion( "EMAPA:19051") AnnotationAssertion( "FMA:83902") AnnotationAssertion( "HBA:9101") AnnotationAssertion( "MA:0000211") AnnotationAssertion( "MAT:0000451") AnnotationAssertion( "NCIT:C12460") AnnotationAssertion( "TAO:0001353") AnnotationAssertion(Annotation( "BIRNLEX:1032") "UMLS:C0039433") AnnotationAssertion(Annotation( "ncithesaurus:Tectum_Mesencephali") "UMLS:C0039433") AnnotationAssertion( "VHOG:0001388") AnnotationAssertion(Annotation( "BIRNLEX:1032") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=465") AnnotationAssertion(Annotation( "ZFA:0000445") "mesencephalic tectum") AnnotationAssertion( "neuraxis tectum") AnnotationAssertion( "tectum") AnnotationAssertion(Annotation( "BTO:0001793") "tectum mesencephali") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "t. mesencephali") AnnotationAssertion(Annotation( "NeuroNames:465") Annotation( ) "tectum mesencephalicum") AnnotationAssertion(Annotation( "NeuroNames:465") "tectum of midbrain") AnnotationAssertion( "UBERON:0002314") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "midbrain tectum") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/c/cf/Gray685.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "Wikipedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (gray matter of spinal cord) AnnotationAssertion(Annotation( "MP:0008503") "The ridge-shaped grey matter of the spinal cord that extends longitudunally through the center of each half of the spinal cord, and are largely or entirely composed of nerve cell bodies and their dendrites and some supportive tissue.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:Scgrey") AnnotationAssertion( "DHBA:146035048") AnnotationAssertion( "EMAPA:35792") AnnotationAssertion( "FMA:256580") AnnotationAssertion( "MA:0000002") AnnotationAssertion( "NCIT:C32696") AnnotationAssertion( "NLXANAT:100204") AnnotationAssertion(Annotation( "ncithesaurus:Gray_Matter_of_the_Spinal_Cord") "UMLS:C0475853") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "gray matter of spinal cord") AnnotationAssertion(Annotation( "FMA:256580") "gray substance of spinal cord") AnnotationAssertion( "grey matter of spinal cord") AnnotationAssertion( "grey substance of spinal cord") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "spinal cord gray matter") AnnotationAssertion( "spinal cord grey matter") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "spinal cord grey substance") AnnotationAssertion(Annotation( "FMA:256580") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "substantia grisea medullae spinalis") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002315") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "gray matter of spinal cord") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (white matter) AnnotationAssertion(Annotation( ) Annotation( ) "Neural tissue consisting of myelinated axons connecting grey matter areas of the central nervous system.") AnnotationAssertion(Annotation( "FMA:83929") "Cell part cluster consisting predominantly of neurites in the brain and the spinal cord[FMA:83929].") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0002142") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "Multi-tissue structure comprised largely of myelinated axons.[TAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001764") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "DOI:10.1038/nature09614 Nave KA, Myelination and support of axonal integrity by glia. Nature (2010)") "The myelination of axons by glial cells was the last major step in the evolution of cells in the vertebrate nervous system, and white-matter tracts are key to the architecture of the mammalian brain.[well established][VHOG]") AnnotationAssertion(Annotation( "NIF"^^xsd:string) Annotation( "https://github.com/SciCrunch/NIF-Ontology/issues/83") "nlx_anat_101177 seems to have been lost in the transition from NIFGA to Neurolex") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AEO:0000139") AnnotationAssertion( "AEO:0001011") AnnotationAssertion( "EMAPA:35927") AnnotationAssertion( "FMA:83929") AnnotationAssertion( "HBA:9218") AnnotationAssertion( "MA:0001135") AnnotationAssertion( "NCIT:C33892") AnnotationAssertion( "NLX:412") AnnotationAssertion( "NLXANAT:101177") AnnotationAssertion( "OpenCyc:Mx4rwOAsDZwpEbGdrcN5Y29ycA") AnnotationAssertion( "PBA:294022044") AnnotationAssertion( "TAO:0000145") AnnotationAssertion( "TAO:0002142") AnnotationAssertion( "TAO:0002143") AnnotationAssertion(Annotation( "ncithesaurus:White_Matter") "UMLS:C0682708") AnnotationAssertion( "VHOG:0001764") AnnotationAssertion( "ZFA:0001682") AnnotationAssertion(Annotation( "ZFA:0001682") "CNS tract/commissure") AnnotationAssertion(Annotation( "AEO:0001011") "neuronal white matter") AnnotationAssertion(Annotation( "FMA:83929") "white matter of neuraxis") AnnotationAssertion( "white substance") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "TAO:0000145") "CNS tracts and commissures") AnnotationAssertion(Annotation( "TAO:0002143") "CNS white matter") AnnotationAssertion(Annotation( ) Annotation( ) "substantia alba") AnnotationAssertion(Annotation( "VHOG:0001764") "white mater") AnnotationAssertion( "UBERON:0002316") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "white matter") AnnotationAssertion( "Spinal:nerve.svg"^^xsd:anyURI) AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/d/d7/Grey_matter_and_white_matter_-_very_high_mag.jpg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (white matter of cerebellum) AnnotationAssertion(Annotation( "BIRNLEX:1562") "Regional part of cerebellum consisting of the myelinated axons lying deep to the granule cell layer, excluding the deep cerebellar nuclei and the cerebellar peduncles.") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0002183") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "CNS white matter that is part of the cerebellum.[TAO]") AnnotationAssertion(Annotation( "NIF"^^xsd:string) "in NIF this is a composite structure; in MA and FMA it is explicitly part of cerebellum. This leads to consistency problems with strict parcellation schemes like ABA, see cerebellar peduncles. In NIF this is a composite structure, this is followed partially here in weakening the relationship to overlaps") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:CB-white") AnnotationAssertion( "BAMS:cbw") AnnotationAssertion( "BIRNLEX:1562") AnnotationAssertion( "DMBA:16926") AnnotationAssertion( "EMAPA:35235") AnnotationAssertion( "FMA:83943") AnnotationAssertion( "HBA:9288") AnnotationAssertion( "MA:0002430") AnnotationAssertion( "NCIT:C49217") AnnotationAssertion( "TAO:0002183") AnnotationAssertion(Annotation( "BIRNLEX:1562") "UMLS:C0152381") AnnotationAssertion(Annotation( "ncithesaurus:Cerebellum_White_Matter") "UMLS:C0152381") AnnotationAssertion( "ZFA:0001708") AnnotationAssertion(Annotation( "BIRNLEX:1562") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=691") AnnotationAssertion( "cerebellar white matter") AnnotationAssertion( "cerebellum white matter") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "ZFA:0001708") Annotation( ) "cerebellar tracts/commissures") AnnotationAssertion(Annotation( "NeuroNames:691") "medullary substance of cerebellum") AnnotationAssertion(Annotation( "NeuroNames:691") Annotation( ) "substantia centralis medullaris cerebelli") AnnotationAssertion(Annotation( "NeuroNames:691") Annotation( ) "substantia medullaris cerebelli") AnnotationAssertion( "UBERON:0002317") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "white matter of cerebellum") SubClassOf( ) SubClassOf(Annotation( "FMA-weakened") Annotation( "MA-weakened") ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) # Class: (white matter of spinal cord) AnnotationAssertion(Annotation( "MP:0008027") "The regions of the spinal cord that are largely or entirely composed of myelinated nerve cell axons and contain few or no neural cell bodies or dendrites.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:SCwhite") AnnotationAssertion( "DHBA:146035088") AnnotationAssertion( "EMAPA:35795") AnnotationAssertion( "FMA:83945") AnnotationAssertion( "MA:0000910") AnnotationAssertion( "NCIT:C33893") AnnotationAssertion(Annotation( "ncithesaurus:White_Matter_of_the_Spinal_Cord") "UMLS:C0458457") AnnotationAssertion( "spinal cord white matter") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "spinal cord white matter of neuraxis") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "spinal cord white substance") AnnotationAssertion(Annotation( "FMA:83945") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "substantia alba medullae spinalis") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "white matter of neuraxis of spinal cord") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "white substance of spinal cord") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002318") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "white matter of spinal cord") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (mesangium) AnnotationAssertion(Annotation( ) Annotation( ) "The inner layer of the glomerulus, within the basement membrane surrounding the glomerular capillaries.") AnnotationAssertion( "mesangial") AnnotationAssertion(Annotation( "MA"^^xsd:string) "WP considers this the same as glomerular mesangium. In MA, glomerular and extraglomerular are distingsuished. FMA class has no definition and is a type of stroma, which is inconsistent with our classification of this here.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0002494") AnnotationAssertion( "EMAPA:28248") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:36561") AnnotationAssertion( "FMA:84139") AnnotationAssertion( "MA:0002617") AnnotationAssertion( "NCIT:C33101") AnnotationAssertion(Annotation( "ncithesaurus:Mesangium") "UMLS:C0017655") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002319") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "mesangium") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (glomerular mesangium) AnnotationAssertion(Annotation( ) Annotation( "MESH:A05.810.453.736.520.380") "A thin membrane which helps to support the capillary loops in a renal glomerulus. It is connective tissue composed of mesangial cells - myofibroblasts phenotypically related to vascular smooth muscle cells (muscle, smooth, vascular), phagocytes and the mesangial extracellular matrix.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:27961") AnnotationAssertion( "EMAPA:28248") AnnotationAssertion( "FMA:84140") AnnotationAssertion( "GAID:430") AnnotationAssertion( "MA:0002606") AnnotationAssertion( "MESH:A05.810.453.736.520.380") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002320") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "glomerular mesangium") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "GO"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (extraglomerular mesangium) AnnotationAssertion(Annotation( "ISBN:0-683-40008-8"^^xsd:string) Annotation( "MP:0011340") "The tissue comprised of mesangial cells that fill the triangular space between the macula densa and the afferent and efferent arterioles of the juxtaglomerular apparatus.") AnnotationAssertion( "check MA part_ofs - should be spatially disjoint from renal glomerulus?") AnnotationAssertion( "EMAPA:28278") AnnotationAssertion( "FMA:84141") AnnotationAssertion( "MA:0002602") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002321") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "extraglomerular mesangium") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "MA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "MA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) # Class: (periventricular nucleus) AnnotationAssertion(Annotation( ) "A thin sheet of small neurons located in the wall of the third ventricle, a composite structure of the hypothalamus.") AnnotationAssertion(Annotation( "ZFA:0000260, GOC:MAH, ISBN:3764351209") "Diencephalic nucleus which is the periventricular part of the ventral hypothalamic zone. From Neuroanatomy of the Zebrafish Brain.") AnnotationAssertion( ) AnnotationAssertion( "FMA:84354") AnnotationAssertion( "TAO:0000260") AnnotationAssertion( "ZFA:0000260") AnnotationAssertion(Annotation( "ZFA:0000260") "ventral zone of periventricular hypothalamus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "ZFA:0000260") Annotation( ) "periventricular nuclei") AnnotationAssertion( "UBERON:0002322") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "periventricular nucleus") SubClassOf( ) # Class: (coelemic cavity lumen) AnnotationAssertion(Annotation( "BTO:0001707") "The cavity within the body of all animals higher than the coelenterates and certain primitive worms, formed by the splitting of the embryonic mesoderm into two layers. In mammals it forms the peritoneal, pleural, and pericardial cavities.") AnnotationAssertion( "check the FMA placement here; ncit placement of body cavity here probably not correct") AnnotationAssertion(Annotation( "2012-09-12") Annotation( "ZFA:0001438") Annotation( "ZFA") Annotation( "ZFIN:curator"^^xsd:string) "Anatomical space, part of the trunk that contains the pericardial and pleuroperitoneal cavities[ZFA].") AnnotationAssertion(Annotation( "2012-09-12") Annotation( "BTO:0001707") Annotation( "BTO") Annotation( "BTO"^^xsd:string) "The cavity within the body of all animals higher than the coelenterates and certain primitive worms, formed by the splitting of the embryonic mesoderm into two layers. In mammals it forms the peritoneal, pleural, and pericardial cavities[BTO].") AnnotationAssertion( "In mammals it forms the peritoneal, pleural, and pericardial cavities") AnnotationAssertion( "UBERON:0000169") AnnotationAssertion(Annotation( "BTO:0001707") "body cavity") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AEO:0000186") AnnotationAssertion( "BTO:0001707") AnnotationAssertion( "EHDAA2:0000267") AnnotationAssertion( "FBbt:00005060") AnnotationAssertion( "FMA:85006") AnnotationAssertion( "NCIT:C25444") AnnotationAssertion( "RETIRED_EHDAA2:0003186") AnnotationAssertion( "TAO:0001438") AnnotationAssertion(Annotation( "ncithesaurus:Cavity") "UMLS:C0333343") AnnotationAssertion( "ZFA:0001438") AnnotationAssertion( "galen:BodyCavity") AnnotationAssertion(Annotation( "EHDAA2:0000267") "coelomic cavity") AnnotationAssertion(Annotation( "EHDAA2:0000267") "coelomic cavity lumen") AnnotationAssertion( "main body cavity") AnnotationAssertion(Annotation( "FMA:85006") "space of body compartment") AnnotationAssertion(Annotation( "NCBITaxon:7742") "ventral body cavity") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0001707") "celom") AnnotationAssertion( "coelom") AnnotationAssertion(Annotation( "BTO:0001707") "coelome") AnnotationAssertion(Annotation( "FBbt:00005060") "hemocoel") AnnotationAssertion( "UBERON:0002323") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "coelemic cavity lumen") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "definitional"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (muscle of back) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "Any muscle organ that is part of a back [Automatically generated definition].") AnnotationAssertion( "EMAPA:35161") AnnotationAssertion( "FMA:85216") AnnotationAssertion( "MA:0000496") AnnotationAssertion( "back muscle") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "back muscle organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "muscle organ of back") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002324") AnnotationAssertion(rdfs:label "muscle of back") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "prolog"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (epithelium of urethra) AnnotationAssertion(Annotation( "GO:0061071") "The urethra is a renal system organ that carries urine from the bladder to outside the body. The epithelium is the tubular, planar layer of cells through which the urine passes..") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:31518") AnnotationAssertion( "FMA:85275") AnnotationAssertion( "MA:0001686") AnnotationAssertion( "NCIT:C49309") AnnotationAssertion(Annotation( "ncithesaurus:Urethra_Epithelium") "UMLS:C1710584") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelial tissue of urethra") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "urethra epithelial tissue") AnnotationAssertion( "urethra epithelium") AnnotationAssertion( "uberon") AnnotationAssertion( "urethral epithelium") AnnotationAssertion(Annotation( "EMAPA:31518") "urethral plate") AnnotationAssertion(Annotation( "EMAPA:31518") "urethral seam") AnnotationAssertion( "UBERON:0002325") AnnotationAssertion(rdfs:label "epithelium of urethra") SubClassOf( ) SubClassOf(Annotation( "GO"^^xsd:string) ) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lamina propria of urethra) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A lamina propria that is part of a urethra [Automatically generated definition].") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37785") AnnotationAssertion( "FMA:85276") AnnotationAssertion( "MA:0001689") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "lamina propria mucosa of urethra") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "lamina propria mucosae of urethra") AnnotationAssertion( "urethra lamina propria") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "urethra lamina propria mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "urethra lamina propria mucosae") AnnotationAssertion( "uberon") AnnotationAssertion( "urethral lamina propria") AnnotationAssertion( "UBERON:0002326") AnnotationAssertion(rdfs:label "lamina propria of urethra") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (trunk of intercostal nerve) AnnotationAssertion( "EMAPA:18227") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37720") AnnotationAssertion( "FMA:85315") AnnotationAssertion( "MA:0001176") AnnotationAssertion( "intercostal nerve trunk") AnnotationAssertion( "intercostal neural trunk") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002327") AnnotationAssertion(rdfs:label "trunk of intercostal nerve") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (notochord) AnnotationAssertion(Annotation( ) Annotation( ) Annotation( ) Annotation( ) Annotation( "ISBN:0815318960") "A flexible rod-shaped body found in embryos of all chordates. It is composed of cells derived from the mesoderm and defines the primitive axis of the embryo. In some chordates, it persists throughout life as the main axial support of the body, while in most vertebrates it becomes the nucleus pulposus of the intervertebral disc. The notochord is found ventral to the neural tube.") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "VSAO:0000032") Annotation( "VSAO"^^xsd:string) Annotation( "PSPUB:0000170"^^xsd:string) "Avascular multi-tissue structure composed of large vacuolated epithelial cells (chordablasts) and perichordal fibrous tissue.[VSAO]") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0000135") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "Rod-like principal supportive element of the embryo and larva, present in the midline just ventral to the neural tube, and differentiating during the segmentation period to form large vacuolated epithelial cells and a surrounding a sheath of fibrous and elastic layers. Layering of the sheath may differ in structure, thickness and development among groups; in cypriniforms there are actually three very thin layers to the sheath. A functional, well developed notochord is present throughout life in certain basal fish groups but not in cypriniforms. Kimmel et al, 1995.[TAO]") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0000327") Annotation( "AAO"^^xsd:string) Annotation( "AAO:LAP"^^xsd:string) "Slender rod of fibrous connective tissue surrounding a core of fluid-filled cells of mesodermal origin; it lies above the gut and directly beneath the spinal cord. The notochord is present during early development and in a few cases it is retained through life; however, usually the notochord is replaced by the vertebral column.[AAO]") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0000327") Annotation( "AAO"^^xsd:string) "relationship type change: differentiates_from mesoderm (AAO:0000304) CHANGED TO: develops_from mesoderm (UBERON:0000926)[AAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000199") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0030223693 Liem KF, Bemis WE, Walker WF, Grande L, Functional Anatomy of the Vertebrates: An Evolutionary Perspective (2001) p.28"^^xsd:string) "(...) at some stage of its development, every chordate exhibits five uniquely derived characters or synapomorphies of the group: (...) (3) a stiff, longitudinal rod of turgid cells along the dorsal part of the body that is called a notochord (...).[well established][VHOG]") AnnotationAssertion( "notochordal") AnnotationAssertion( "In between vertebra the notochord becomes the nucleus pulposus, under it degenerates, and at anterior end in some species its tissue merges with some of the cranial bones.. Some organisms retain a post-embryonic notochord.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0000327") AnnotationAssertion( "BTO:0001768") AnnotationAssertion( "CALOHA:TS-0690") AnnotationAssertion( "EHDAA2:0001277") AnnotationAssertion( "EHDAA:1241") AnnotationAssertion( "EHDAA:6021") AnnotationAssertion( "EMAPA:16191") AnnotationAssertion( "EV:0100002") AnnotationAssertion( "FMA:85521") AnnotationAssertion( "GAID:1311") AnnotationAssertion( "MAT:0000281") AnnotationAssertion( "MESH:A16.254.610") AnnotationAssertion( "NCIT:C12463") AnnotationAssertion( "TAO:0000135") AnnotationAssertion(Annotation( "ncithesaurus:Notochord") "UMLS:C0028439") AnnotationAssertion( "VHOG:0000199") AnnotationAssertion( "VSAO:0000032") AnnotationAssertion( "XAO:0000055") AnnotationAssertion( "ZFA:0000135") AnnotationAssertion( "embryonic notocord") AnnotationAssertion(Annotation( "ZFA:0000135") "notocord") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "notochorda") AnnotationAssertion( "UBERON:0002328") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "The notochord appears early in embryogeny and plays an important role in promoting or organizing the embryonic development of nearby structures. In most adult chordates the notochord disappears or becomes highly modified. In some non-vertebrate chordates and fishes the notochord persists as a laterally flexible but incompressible skeletal rod that prevents telescopic collapse of the body during swimming[TOLWEB]") AnnotationAssertion(rdfs:label "notochord") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/6/64/Gray19_with_color.png"^^xsd:anyURI) SubClassOf(Annotation( "VSAO"^^xsd:string) ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "ZFA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (somite) AnnotationAssertion(Annotation( ) Annotation( ) "Somites are spheres of epithelial cells that form sequentially along the anterior-posterior axis of the embryo through mesenchymal to epithelial transition of the presomitic mesoderm.") AnnotationAssertion( "currently classified as an epithelial vesicle, consistent with EHDAA2 and https://github.com/obophenotype/uberon/wiki/The-neural-crest. Consider making 'somitic mesoderm' a separate term and correlate with regionalization processes. Consider moving ZFA term to 'trunk somite' as it is part of the trunk") AnnotationAssertion(Annotation( ) ) AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0010569") Annotation( "AAO"^^xsd:string) Annotation( "AAO:EJS"^^xsd:string) "Post-cranial axial segments which form sclerotome and dermomyotome.[AAO]") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0000155") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "Undifferentiated mesodermal components of early trunk or tail segments or metameres, derived from paraxial mesoderm; forms myotomes, sclerotomes and perhaps dermatomes. Kimmel et al, 1995.[TAO]") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0000155") Annotation( "TAO"^^xsd:string) "relationship loss: develops_from paraxial mesenchyme (TAO:0000942)[TAO]") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0000155") Annotation( "TAO"^^xsd:string) "relationship type change: OBO_REL:part_of trunk (TAO:0001115) CHANGED TO: develops_from trunk (UBERON:0002100)[TAO]") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0010569") Annotation( "AAO"^^xsd:string) "relationship type change: part_of paraxial mesoderm (AAO:0010568) CHANGED TO: develops_from paraxial mesoderm (UBERON:0003077)[AAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000191") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0030223693 Liem KF, Bemis WE, Walker WF, Grande L, Functional Anatomy of the Vertebrates: An Evolutionary Perspective (2001) p.40, DOI:10.1093/icb/43.1.137 Balavoine G, Adoutte A, The segmented urbilateria: a testable scenario. Integrative and Comparative Biology (2003)") "(...) cephalocordates and craniates belong to a group known as Somitichordata. Somitichordate synapomorphies include (1) somites (...) (reference 1); The idea that the last common ancestor of bilaterian animals (Urbilateria) was segmented has been raised recently on evidence coming from comparative molecular embryology (reference 2).[well established][VHOG]") AnnotationAssertion( "somitic") AnnotationAssertion(Annotation( "GO:0001756") "mesodermal cluster") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010569") AnnotationAssertion( "AEO:0001015") AnnotationAssertion( "BTO:0001558") AnnotationAssertion( "EHDAA2:0003436") AnnotationAssertion( "EHDAA:366") AnnotationAssertion( "EHDAA:699") AnnotationAssertion( "EMAPA:31169") AnnotationAssertion( "FMA:85522") AnnotationAssertion( "GAID:1306") AnnotationAssertion( "MAT:0000068") AnnotationAssertion( "MESH:A16.254.425.660.750") AnnotationAssertion( "MIAA:0000068") AnnotationAssertion( "NCIT:C34302") AnnotationAssertion( "TAO:0000155") AnnotationAssertion(Annotation( "ncithesaurus:Somite") "UMLS:C0376449") AnnotationAssertion( "VHOG:0000191") AnnotationAssertion( "XAO:0000058") AnnotationAssertion( "ZFA:0000155") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "ISBN:0073040584"^^xsd:string) "epimere") AnnotationAssertion( "epimere mesoderm") AnnotationAssertion(Annotation( ) "epithelial somite") AnnotationAssertion(Annotation( ) "somites") AnnotationAssertion( "somitic mesoderm") AnnotationAssertion(Annotation( ) Annotation( ) "somitus") AnnotationAssertion( "UBERON:0002329") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "When the somite becomes segmented from the segmental plate, it is composed of an epithelial sac enclosing mesenchymal somitocoel cells. Thereafter the somite differentiates into two parts, the ventro-medial mesenchymal sclerotome and the dorso-lateral epithelial dermomyotome. This change in the epithelial somite depends on surrounding tissue [PMID:15906248]") AnnotationAssertion(rdfs:label "somite") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/6/64/Gray19_with_color.png"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ) SubClassOf(Annotation( "ZFA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (exocrine system) AnnotationAssertion(Annotation( ) "Anatomical system that consists of the glands and parts of glands that produce exocrine secretions and help to integrate and control bodily metabolic activity. Exocrine glands are glands that secrete their products (hormones) into ducts (duct glands). They are the counterparts to endocrine glands, which secrete their products (hormones) directly into the bloodstream (ductless glands) or release hormones (paracrines) that affect only target cells nearby the release site. [Wikipedia].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "CALOHA:TS-2057") AnnotationAssertion( "EHDAA2:0002225") AnnotationAssertion( "EMAPA:35329") AnnotationAssertion( "FMA:85539") AnnotationAssertion( "MA:0002411") AnnotationAssertion( "NCIT:C12957") AnnotationAssertion(Annotation( "ncithesaurus:Exocrine_System") "UMLS:C1516995") AnnotationAssertion( "WikipediaCategory:Exocrine_system") AnnotationAssertion(Annotation( "EHDAA2:0002225") "exocrine glandular system") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002330") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "exocrine system") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses( ) DisjointClasses( ) DisjointClasses( ) DisjointClasses( ) DisjointClasses( ) # Class: (umbilical cord) AnnotationAssertion(Annotation( ) Annotation( ) Annotation( "ISBN:0-683-40008-8"^^xsd:string) Annotation( "MP:0001725") "The connecting cord from the developing embryo to the placenta.") AnnotationAssertion(Annotation( ) "The connecting cord from the developing embryo or fetus to the placenta. During prenatal development, the umbilical cord comes from the same zygote as the fetus and (in humans) normally contains two arteries (the umbilical arteries) and one vein (the umbilical vein), buried within Wharton's jelly. The umbilical vein supplies the fetus with oxygenated, nutrient-rich blood from the placenta.property_value, external_definition the umbilical arteries return the deoxygenated, nutrient-depleted blood[WP].") AnnotationAssertion( "umbilical") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0001415") AnnotationAssertion( "CALOHA:TS-1078") AnnotationAssertion( "EFO:0001415") AnnotationAssertion( "EHDAA2:0000312") AnnotationAssertion( "EHDAA:158") AnnotationAssertion( "EMAPA:26115") AnnotationAssertion( "EV:0100127") AnnotationAssertion( "FMA:85541") AnnotationAssertion( "GAID:517") AnnotationAssertion( "MAT:0000280") AnnotationAssertion( "MESH:A16.254.789") AnnotationAssertion( "MIAA:0000280") AnnotationAssertion( "NCIT:C34320") AnnotationAssertion( "OpenCyc:Mx4rvyewDJwpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Umbilical_Cord") "UMLS:C0041633") AnnotationAssertion(Annotation( "MP:0012134") Annotation( ) "chorda umbilicalis") AnnotationAssertion(Annotation( "MP:0012134") Annotation( ) "funiculus umbilicalis") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "birth cord") AnnotationAssertion( "connecting stalk") AnnotationAssertion(Annotation( ) Annotation( ) "funiculus umbilicalis") AnnotationAssertion(Annotation( "BTO:0001415") "yolk stalk") AnnotationAssertion( "UBERON:0002331") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "See notes for connecting stalk") AnnotationAssertion(rdfs:label "umbilical cord") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/f/f3/Umbilicalcord.jpg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pulmonary trunk) AnnotationAssertion(Annotation( ) "An arterial trunk which is continuous with the heart and branches into the pulmonary arteries.") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001134") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( ) "An arterial trunk with origin from the right ventricle of the heart, and dividing into the right and left pulmonary arteries, which enter the corresponding lungs and branch with the bronchi. [TFD][VHOG]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001134") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0072528305 Kardong KV, Vertebrates: Comparative Anatomy, Function, Evolution (2006) p.481") "As in birds, the conus arteriosus split during embryonic development in mammals to produce the pulmonary trunk and single aortic trunk of the adult.[well established][VHOG]") AnnotationAssertion( "EHDAA2:0001576") AnnotationAssertion( "EHDAA:9831") AnnotationAssertion( "EMAPA:17015") AnnotationAssertion( "FMA:8612") AnnotationAssertion( "MA:0002033") AnnotationAssertion( "NCIT:C116918") AnnotationAssertion( "OpenCyc:Mx4rv-6d0ZwpEbGdrcN5Y29ycA") AnnotationAssertion( "VHOG:0001134") AnnotationAssertion( "galen:PulmonaryTrunk") AnnotationAssertion( "pulmonary artery (trunk)") AnnotationAssertion( "trunk of pulmonary arterial tree") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "main pulmonary artery") AnnotationAssertion( "UBERON:0002333") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "pulmonary trunk") AnnotationAssertion( "Alveoli:diagram.png"^^xsd:anyURI) SubClassOf(Annotation( "MA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (submandibular duct) AnnotationAssertion(Annotation( "ISBN:0-683-40008-8"^^xsd:string) Annotation( "MP:0009525") "The duct of the submadibular gland that opens at the sublingual papilla near the frenulum of the tongue.") AnnotationAssertion(Annotation( "FMA"^^xsd:string) "FMA also has 'main submandibular duct' (FMA:59899)") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0004556") AnnotationAssertion( "EMAPA:35833") AnnotationAssertion( "FMA:86266") AnnotationAssertion( "MA:0002698") AnnotationAssertion( "NCIT:C33649") AnnotationAssertion(Annotation( "ncithesaurus:Submandibular_Duct") "UMLS:C0227472") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( "FMA:59899") Annotation( ) "Wharton's duct") AnnotationAssertion(Annotation( "BTO:0004556") "ductus submandibularis") AnnotationAssertion(Annotation( ) Annotation( ) "ductus submaxillaris") AnnotationAssertion( "submandibular salivary duct") AnnotationAssertion(Annotation( "BTO:0004556") "submaxillar gland duct") AnnotationAssertion( "submaxillary duct") AnnotationAssertion( "UBERON:0002334") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "submandibular duct") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/7/7d/Gray1024.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (macula densa) AnnotationAssertion(Annotation( ) Annotation( "GO:0072024") "The macula densa is an area of specialized cells in the distal tubule that makes contact with the vascular pole of the glomerulus[GO].") AnnotationAssertion(Annotation( "MA"^^xsd:string) "not part of a nephron or distal tubule in MA and FMA") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0003940") AnnotationAssertion( "EMAPA:28399") AnnotationAssertion( "FMA:86333") AnnotationAssertion( "MA:0002603") AnnotationAssertion( "NCIT:C33043") AnnotationAssertion(Annotation( "ncithesaurus:Macula_Densa") "UMLS:C0227662") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002335") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "macula densa") SubClassOf( ) SubClassOf(Annotation( "MA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "GO"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (corpus callosum) AnnotationAssertion(Annotation( "BIRNLEX:1087") "White matter structure containing massive numbers of commissural fibers connecting cortical areas in the two cerebral hemispheres.it is subdivided into a genu, a rostrum, a body, and a splenium. (MM).") AnnotationAssertion(Annotation( "Wikipedia"^^xsd:string) ) AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001608") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( ) "The largest commissure of the brain connecting the cerebral hemispheres. [TFD][VHOG]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001608") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "DOI:10.1111/j.1749-6632.1969.tb20447.x Ebner FF, A comparison of primitive forebrain organization in metatherian and eutherian mammals. Annals of the New York Academy of Sciences (1969)") "In addition to the anterior commissure, placental mammals have a phylogenetically new forebrain commissure, the corpus callosum, which primarily interconnects the neocortex of the cerebral hemispheres.[well established][VHOG]") AnnotationAssertion(Annotation( ) "The corpus callosum is found only in placental mammals. other groups do have other brain structures that allow for communication between the two hemispheres, such as the anterior commissure, which serves as the primary mode of interhemispheric communication in marsupials.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:CC") AnnotationAssertion( "BAMS:cc") AnnotationAssertion( "BIRNLEX:1087") AnnotationAssertion( "BM:Tel-CC") AnnotationAssertion( "BTO:0000615") AnnotationAssertion( "CALOHA:TS-0180") AnnotationAssertion( "DHBA:10561") AnnotationAssertion( "EFO:0001390") AnnotationAssertion( "EMAPA:35253") AnnotationAssertion( "EV:0100305") AnnotationAssertion( "FMA:86464") AnnotationAssertion( "GAID:683") AnnotationAssertion( "HBA:9222") AnnotationAssertion( "MA:0000188") AnnotationAssertion( "MAT:0000286") AnnotationAssertion( "MBA:776") AnnotationAssertion( "MESH:A08.186.211.730.885.362") AnnotationAssertion( "MIAA:0000286") AnnotationAssertion( "NCIT:C12446") AnnotationAssertion( "OpenCyc:Mx4rvbNzdZwpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "BIRNLEX:1087") "UMLS:C0010090") AnnotationAssertion(Annotation( "ncithesaurus:Corpus_Callosum") "UMLS:C0010090") AnnotationAssertion( "VHOG:0001608") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002336") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "corpus callosum") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/a/aa/Gray733.png"^^xsd:anyURI) SubClassOf(Annotation( "FMA-part_of") Annotation( "MA"^^xsd:string) ) SubClassOf(Annotation( "MP"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (endometrial stroma) AnnotationAssertion(Annotation( "ncithesaurus:Endometrial_Stroma") "The layer of connective tissue comprised of the endometrial lining of the uterus which fluctuates in thickness throughout the menstrual cycle.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "CALOHA:TS-1266") AnnotationAssertion( "EMAPA:35310") AnnotationAssertion( "FMA:86487") AnnotationAssertion( "MA:0002734") AnnotationAssertion( "NCIT:C32516") AnnotationAssertion(Annotation( "ncithesaurus:Endometrial_Stroma") "UMLS:C0227849") AnnotationAssertion( "endometrium stroma") AnnotationAssertion( "stroma of endometrium") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002337") AnnotationAssertion(rdfs:label "endometrial stroma") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lamina propria of bronchus) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A lamina propria that is part of a bronchus [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:35194") AnnotationAssertion( "FMA:86619") AnnotationAssertion( "MA:0001836") AnnotationAssertion( "NCIT:C49212") AnnotationAssertion(Annotation( "ncithesaurus:Bronchus_Lamina_Propria") "UMLS:C1707054") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bronchi lamina propria") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bronchi lamina propria mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bronchi lamina propria mucosae") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bronchial trunk lamina propria") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bronchial trunk lamina propria mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bronchial trunk lamina propria mucosae") AnnotationAssertion( "bronchus lamina propria") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bronchus lamina propria mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bronchus lamina propria mucosae") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "lamina propria mucosa of bronchi") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "lamina propria mucosa of bronchial trunk") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "lamina propria mucosa of bronchus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "lamina propria mucosae of bronchi") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "lamina propria mucosae of bronchial trunk") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "lamina propria mucosae of bronchus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "lamina propria of bronchi") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "lamina propria of bronchial trunk") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "EMAPA:35194") "bronchial lamina propria") AnnotationAssertion( "UBERON:0002338") AnnotationAssertion(rdfs:label "lamina propria of bronchus") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (epithelium of lobar bronchus) AnnotationAssertion(Annotation( "GO:0060481") "The tissue made up of epithelial cells that lines the inside of the lobar bronchus.") AnnotationAssertion( "EMAPA:32695") AnnotationAssertion( "FMA:86624") AnnotationAssertion( "MA:0001842") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelial tissue of lobar bronchus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelial tissue of secondary bronchus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelium of secondary bronchus") AnnotationAssertion( "lobar bronchial epithelium") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "lobar bronchus epithelial tissue") AnnotationAssertion( "lobar bronchus epithelium") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "secondary bronchus epithelial tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "secondary bronchus epithelium") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002339") AnnotationAssertion(rdfs:label "epithelium of lobar bronchus") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (epithelium of main bronchus) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An epithelium that is part of a main bronchus [Automatically generated definition].") AnnotationAssertion( "UBERON:0003245") AnnotationAssertion( "EHDAA2:0001047") AnnotationAssertion( "EHDAA:5003") AnnotationAssertion( "EMAPA:16851") AnnotationAssertion( "FMA:86625") AnnotationAssertion( "MA:0001847") AnnotationAssertion( "VHOG:0001034") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bronchus principalis epithelial tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bronchus principalis epithelium") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelial tissue of bronchus principalis") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelial tissue of main bronchus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelial tissue of primary bronchus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelial tissue of principal bronchus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelium of bronchus principalis") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelium of primary bronchus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelium of principal bronchus") AnnotationAssertion( "main bronchial epithelium") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "main bronchus epithelial tissue") AnnotationAssertion( "main bronchus epithelium") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "primary bronchus epithelial tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "primary bronchus epithelium") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "principal bronchus epithelial tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "principal bronchus epithelium") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002340") AnnotationAssertion(rdfs:label "epithelium of main bronchus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (epithelium of segmental bronchus) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An epithelium that is part of a segmental bronchus [Automatically generated definition].") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37740") AnnotationAssertion( "FMA:86626") AnnotationAssertion( "MA:0001850") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelial tissue of segmental bronchus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelial tissue of tertiary bronchus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelium of tertiary bronchus") AnnotationAssertion( "segmental bronchial epithelium") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "segmental bronchus epithelial tissue") AnnotationAssertion( "segmental bronchus epithelium") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "tertiary bronchus epithelial tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "tertiary bronchus epithelium") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002341") AnnotationAssertion(rdfs:label "epithelium of segmental bronchus") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (neural crest) AnnotationAssertion(Annotation( "MP:0009846") "A specialized region of ectoderm found between the neural ectoderm (neural plate) and non-neural ectoderm and composed of highly migratory pluripotent cells that delaminate in early embryonic development from the dorsal neural tube and give rise to an astounding variety of differentiated cell types[MP].") AnnotationAssertion( "consider including subclasses for pre- and post- migratory (e.g. sheets/paths/streams).") AnnotationAssertion(Annotation( ) Annotation( "ISBN:0073040584"^^xsd:string) ) AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0000045") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "A cell population arising from the dorsolateral aspect of the central nervous system primordium during the segmentation period, and later migrating along stereotyped pathways to give rise to a diverse and well-defined set of cell types including pigment cells, peripheral neurons and glia, and head cartilage. Kimmel et al, 1995.[TAO]") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0010578") Annotation( "AAO"^^xsd:string) Annotation( "AAO:EJS"^^xsd:string) "Migratory cell population which delaminates from neural tube, borders surface ectoderm and neural ectoderm, and gives rise to many different tissue types.[AAO]") AnnotationAssertion(Annotation( ) "A well developed neural crest population is present in lampreys (Horigome et al. 1999 ; Tomsa & Langeland, 1999) and gnathostomes. chordate fossils from the early Cambrian (Yunnanozoan and Haikouella) with apparent neural-crest derived structures (pharyngeal denticles and pharyngeal skeletons resembling the striped mucocartilage of the branchial bars in lamprey ammocoete larvae), suggests that neural crest arose very early in vertebrate evolution (Chen et al. 1999; Holland & Chen, 2001). The invertebrate chordates apparently lack defini- tive neural crest. One marker of migrating neural crest in some vertebrates, the antibody HNK1, does not recognize any cells in amphioxus embryos (Holland, unpublished). Even so, in both amphioxus and tunicates, cells at the edges of the neural plate and adjacent nonneural ectoderm share some properties of neural crest[PMID:11523831]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000057") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "DOI:10.1111/j.1469-7580.2012.01495.x Hall BK, Gillis JA, Incremental evolution of the neural crest, neural crest cells and neural crest-derived skeletal tissues. J Anat (2012)") "We conclude that the neural crest is a vertebrate novelty, but that neural crest cells and their derivatives evolved and diversified in a step-wise fashion - first by elaboration of neural plate border cells, then by the innovation or co-option of new or ancient metazoan cell fates.[well established][VHOG]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010578") AnnotationAssertion( "BTO:0001764") AnnotationAssertion( "CALOHA:TS-0676") AnnotationAssertion( "EHDAA2:0004419") AnnotationAssertion( "EMAPA:32737") AnnotationAssertion( "FMA:86666") AnnotationAssertion( "GAID:1310") AnnotationAssertion( "MAT:0000066") AnnotationAssertion( "MESH:A16.254.600") AnnotationAssertion( "MIAA:0000066") AnnotationAssertion( "NCIT:C34222") AnnotationAssertion( "TAO:0000045") AnnotationAssertion(Annotation( "ncithesaurus:Neural_Crest") "UMLS:C0027789") AnnotationAssertion( "VHOG:0000057") AnnotationAssertion( "XAO:0000048") AnnotationAssertion( "ZFA:0000045") AnnotationAssertion(Annotation( "XAO:0000048") Annotation( ) "NC") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "crista neuralis") AnnotationAssertion(Annotation( "VHOG:0000057") "neural crest material") AnnotationAssertion( "UBERON:0002342") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "Gene notes: Many factors and genes, such as Pax3 (Tremblay et al., 1995), slug (Nieto et al., 1994), AP-2 (Zhang et al., 1996; Schorle et al., 1996), and Wnt-1/3a (Ikeya et al., 1997) are expressed in the dorsal most region of the neural tube, and have been shown to be involved in the generation of neural crest cells.") AnnotationAssertion(rdfs:label "neural crest") AnnotationAssertion( "Neural:Crest.png"^^xsd:anyURI) AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/5/5f/Gray644.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "BTO"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "pre migratory https://github.com/obophenotype/uberon/wiki/The-neural-crest") ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (abdomen musculature) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "Set of all muscles in abdomen.") AnnotationAssertion( "distinction between abdomen muscle and abdomen musculature") AnnotationAssertion( "FMA:71294") AnnotationAssertion( "FMA:86917") AnnotationAssertion( "TAO:0001327") AnnotationAssertion( "ZFA:0001327") AnnotationAssertion( "abdominal musculature") AnnotationAssertion(Annotation( "FMA:71294") "muscle group of abdomen") AnnotationAssertion(Annotation( "FMA:71294") "muscles of abdomen") AnnotationAssertion( "musculature of abdomen") AnnotationAssertion(Annotation( "FMA:86917") "musculature of abdominal wall") AnnotationAssertion(Annotation( "FMA:71294") "set of muscles of abdomen") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002343") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "abdomen musculature") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (descending thoracic aorta) AnnotationAssertion(Annotation( "MP:0009868") "The part of the aorta that extends from the arch of the aorta to the diaphragm, and from which arises numerous branches that supply oxygenated blood to the chest cage and the organs within the chest.") AnnotationAssertion( ) AnnotationAssertion( "EFO:0002527") AnnotationAssertion( "EMAPA:18605") AnnotationAssertion( "FMA:87217") AnnotationAssertion( "MA:0002572") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002345") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "descending thoracic aorta") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (neurectoderm) AnnotationAssertion(Annotation( ) "Embryonic ectoderm that gives rise to nervous tissue.") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000150") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "DOI:10.1046/j.1469-7580.2001.19910133.x Graham A. The development and evolution of the pharyngeal arches. J Anat (2001)"^^xsd:string) "(...) the ability of ectoderm to produce neuronal cells is a general metazoan feature.[well established][VHOG]") AnnotationAssertion( "neurectodermal") AnnotationAssertion( "we prefer neurectoderm to neural ectoderm since placodal ectoderm is not classified here") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0011074") AnnotationAssertion( "BILA:0000039") AnnotationAssertion( "CALOHA:TS-1212") AnnotationAssertion( "EHDAA2:0001248") AnnotationAssertion( "EHDAA:1498") AnnotationAssertion( "EHDAA:255") AnnotationAssertion( "EMAPA:16073") AnnotationAssertion( "EV:0100004") AnnotationAssertion( "FBbt:00001061") AnnotationAssertion( "FMA:87657") AnnotationAssertion( "MAT:0000176") AnnotationAssertion( "MIAA:0000176") AnnotationAssertion( "NCIT:C34228") AnnotationAssertion( "TAO:0001120") AnnotationAssertion(Annotation( "ncithesaurus:Neuroectoderm") "UMLS:C1518271") AnnotationAssertion( "VHOG:0000150") AnnotationAssertion( "XAO:0000042") AnnotationAssertion( "ZFA:0001120") AnnotationAssertion( "neural ectoderm") AnnotationAssertion( "neuroectoderm") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "epithelium tubi neuralis; neuroectoderma") AnnotationAssertion( "neuaral ectoderm") AnnotationAssertion( "presumptive central nervous system") AnnotationAssertion(Annotation( "VHOG:0000150") "ventral neurogenic region") AnnotationAssertion( "UBERON:0002346") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "neurectoderm") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "ZFA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (thoracic vertebra) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A thoracic vertebra endochondral element that is composed primarily of a bone tissue.") AnnotationAssertion( "Thoracic vertebrae in all species are defined as those vertebrae which also carry a pair of ribs, and lie caudal to the cervical vertebrae. In humans, they are distinguished by the presence of facets on the sides of the bodies for articulation with the heads of the ribs, and facets on the transverse processes of all, except the eleventh and twelfth, for articulation with the tubercles of the ribs") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:18011") AnnotationAssertion( "FMA:9139") AnnotationAssertion( "GAID:244") AnnotationAssertion( "MA:0000314") AnnotationAssertion( "MESH:D013904") AnnotationAssertion( "NCIT:C12798") AnnotationAssertion( "OpenCyc:Mx4rvdZIBpwpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Thoracic_Vertebra") "UMLS:C0039987") AnnotationAssertion( "dorsal vertebra") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "thorax vertebra") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "vertebra of thorax") AnnotationAssertion( "vertebra thoracica") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002347") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "thoracic vertebra") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/d/d2/Gray90.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (epicardium) AnnotationAssertion(Annotation( ) "A region of the serous membrane that forms the innermost layer of the pericardium and the outer surface of the heart.") AnnotationAssertion( "TODO - check links with UBERON:0002425 visceral serous pericardium. develops from proepicardium. WP:Epicardium -- When considered as a part of the pericardium, it is the inner layer, or visceral pericardium, continuous with the serous layer.") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0005057") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "External layer of the heart.[TAO]") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0010409") Annotation( "AAO"^^xsd:string) Annotation( "AAO:BJB"^^xsd:string) "The inner layer of the pericardium that is in contact with the surface of the heart.[AAO]") AnnotationAssertion( "The visceral pericardium apparently produces the pericardial fluid, which lubricates motion between the inner and outer layers of the pericardium. During ventricular contraction, the wave of depolarization moves from endocardial to epicardial surface. [Wikipedia:Epicardium]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010409") AnnotationAssertion( "EHDAA2:0002202") AnnotationAssertion( "FMA:9461") AnnotationAssertion( "NCIT:C13164") AnnotationAssertion( "TAO:0005057") AnnotationAssertion(Annotation( "ncithesaurus:Epicardium") "UMLS:C0225968") AnnotationAssertion( "VHOG:0000119") AnnotationAssertion( "XAO:0000316") AnnotationAssertion( "ZFA:0005057") AnnotationAssertion( "galen:Epicardium") AnnotationAssertion( "heart epicardium") AnnotationAssertion(Annotation( "FMA:9461") "visceral serous pericardium of heart") AnnotationAssertion(Annotation( "FMA:9461") "visceral serous pericardium proper") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "EMAPA:16589") "pericardium visceral mesothelium") AnnotationAssertion( "UBERON:0002348") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "epicardium") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "multiple"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA-inferred") ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (myocardium) AnnotationAssertion(Annotation( "ISBN:0-683-40008-8"^^xsd:string) Annotation( "MP:0005329") "The middle layer of the heart, comprised mainly of striated cardiac muscle fibers.") AnnotationAssertion( "TODO - check 'Myocardum proper' in FMA. We superclass the more generic class for now. FMA has is_a muscle layer - should we add this? ZFA and BTO both have is_a 'cardiac muscle' (tissue?). But in U we also follow FMA and have cardiac muscle tissue of myocardium (there is also Fibrocollagenous connective tissue of myocardium), which would be identical (see issue-10). Note that GO also treats left/right ventricular cardiac muscle tissue synonymous with ventricular myocardium") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000083") Annotation( "VHOG"^^xsd:string) Annotation( ) "Robust muscular tunic of the heart which forms the basic part of its walls. Its external surface is covered by the pericardium and its internal one by the endocardium. [Dorian_AF, Elsevier's_encyclopaedic_dictionary_of_medicine, Part_B:_Anatomy_(1988)_Amsterdam_etc.:_Elsevier][VHOG]") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0010410") Annotation( "AAO"^^xsd:string) Annotation( "AAO:BJB"^^xsd:string) "The middle layer of the heart, consisting of cardiac muscle.[AAO]") AnnotationAssertion( "myocardial") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010410") AnnotationAssertion( "BSA:0000089") AnnotationAssertion( "BTO:0000901") AnnotationAssertion( "CALOHA:TS-0440") AnnotationAssertion( "EFO:0000819") AnnotationAssertion( "EHDAA2:0004150") AnnotationAssertion( "EMAPA:32688") AnnotationAssertion( "EV:0100022") AnnotationAssertion( "FMA:9462") AnnotationAssertion( "GAID:173") AnnotationAssertion( "MA:0000164") AnnotationAssertion( "MAT:0000453") AnnotationAssertion( "MESH:D009206") AnnotationAssertion( "NCIT:C12371") AnnotationAssertion( "OpenCyc:Mx4ro36AFrCvEduAAAAOpmP6tw") AnnotationAssertion( "RETIRED_EHDAA2:0001220") AnnotationAssertion( "TAO:0001319") AnnotationAssertion(Annotation( "ncithesaurus:Myocardium") "UMLS:C0027061") AnnotationAssertion( "VHOG:0000083") AnnotationAssertion( "XAO:0000065") AnnotationAssertion( "ZFA:0001319") AnnotationAssertion( "galen:Myocardium") AnnotationAssertion( "heart myocardium") AnnotationAssertion(Annotation( "FMA:9462") "muscle of heart") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "ZFA:0001319") "cardiac muscle") AnnotationAssertion(Annotation( "FMA:9462") "heart muscle") AnnotationAssertion(Annotation( "ZFA:0001319") "heart muscle") AnnotationAssertion( "UBERON:0002349") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "myocardium") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/6/6e/Glanzstreifen.jpg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (conducting system of heart) AnnotationAssertion(Annotation( "GO:0003161") "The cardiac conduction system consists of specialized cardiomyocytes that regulate the frequency of heart beat[GO].") AnnotationAssertion( "EHDAA2 divides the system from the tissue") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001271") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "DOI:10.1152/physrev.00006.2003 Moorman AFM, Christoffels VM, Cardiac Chamber Formation: Development, Genes, and Evolution. Physiological Reviews (2003)") "The fish heart displays clear polarity of contraction in a posterior-to-anterior direction. The contraction waves originate in the sinus venosus and terminate in the conus arteriosus. The nodal phenotype persists in the inflow region of the heart, varying from the venosinus to the sinoatrial junctional areas in different species . Similar to the mammalian situation, pacemaker tissue with a lower intrinsic rhythmicity is also found at the atrioventricular junction.[uncertain][VHOG]") AnnotationAssertion( ) AnnotationAssertion( "EFO:0003909") AnnotationAssertion( "EHDAA2:0004185") AnnotationAssertion( "EMAPA:35428") AnnotationAssertion( "EV:0100025") AnnotationAssertion( "FMA:9476") AnnotationAssertion( "MA:0000094") AnnotationAssertion( "MESH:D006329") AnnotationAssertion( "TAO:0005063") AnnotationAssertion( "VHOG:0001271") AnnotationAssertion( "ZFA:0005063") AnnotationAssertion(Annotation( "VHOG:0001271") "cardiac conducting system") AnnotationAssertion( "cardiac conduction system") AnnotationAssertion(Annotation( "GO:0003161") "cardiac impulse conducting system") AnnotationAssertion( "cardionector") AnnotationAssertion(Annotation( "FMA:9476") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "complexus stimulans cordis") AnnotationAssertion(Annotation( "GO:0003161") "heart conduction system") AnnotationAssertion(Annotation( "MA:0000094") "impulse conducting system") AnnotationAssertion(Annotation( "FMA:9476") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "systema conducente cordis") AnnotationAssertion( "uberon") AnnotationAssertion( "central conduction system") AnnotationAssertion( "UBERON:0002350") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "conducting system of heart") SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (sinoatrial node) AnnotationAssertion(Annotation( ) Annotation( "GO:0003163") "The part of the cardiac conduction system that controls the timing of heart muscle contraction. It relays electrical signals to the AV node[GO]. Subdivision of conducting system of heart at the junction of the right atrium and the superior vena cava, around the sinoatrial nodal branch of right coronary artery and is continuous with the internodal tract[FMA].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0004358") AnnotationAssertion( "EHDAA2:0004184") AnnotationAssertion( "EMAPA:35772") AnnotationAssertion( "FMA:9477") AnnotationAssertion( "GAID:561") AnnotationAssertion( "MA:0000097") AnnotationAssertion( "MESH:D012849") AnnotationAssertion( "NCIT:C33555") AnnotationAssertion( "OpenCyc:Mx4rOhejDGMcEd2AAABQjYGu0g") AnnotationAssertion( "TAO:0005069") AnnotationAssertion(Annotation( "ncithesaurus:Sinoatrial_Node") "UMLS:C0037189") AnnotationAssertion( "ZFA:0005069") AnnotationAssertion(Annotation( "FMA:9477") "Koch's node") AnnotationAssertion(Annotation( "FMA:9477") "SA nodal muscle tissue") AnnotationAssertion(Annotation( "FMA:9477") "SA node") AnnotationAssertion(Annotation( "FMA:9477") "cardiac pacemaker") AnnotationAssertion(Annotation( "FMA:9477") "node of Keith-Flack") AnnotationAssertion(Annotation( "FMA:9477") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "nodus sinuatrialis") AnnotationAssertion(Annotation( "FMA:9477") "sinoatrial node") AnnotationAssertion(Annotation( "FMA:9477") "sinu-atrial node") AnnotationAssertion(Annotation( "FMA:9477") "sinuatrial nodal muscle tissue") AnnotationAssertion(Annotation( "FMA:9477") "sinuatrial node") AnnotationAssertion(Annotation( "FMA:9477") "sinus node") AnnotationAssertion(Annotation( "FMA:9477") "sinus node of Keith and Flack") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "nodus sinuatrialis") AnnotationAssertion( "UBERON:0002351") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "WP:Heart states: \"The SA node is found in all amniotes but not in more primitive vertebrates. In these animals, the muscles of the heart are relatively continuous and the sinus venosus coordinates the beat which passes in a wave through the remaining chambers. Indeed, since the sinus venosus is incorporated into the right atrium in amniotes, it is likely homologous with the SA node. In teleosts, with their vestigial sinus venosus, the main centre of coordination is, instead, in the atrium.\". Note however that ZFA has SA node.") AnnotationAssertion(rdfs:label "sinoatrial node") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/d/d2/Sinoatrial_node_low_mag.jpg"^^xsd:anyURI) AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/d/de/Sinoatrial_node_2_low_mag.jpg"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "cjm"^^xsd:string) ) SubClassOf(Annotation( "ZFA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (atrioventricular node) AnnotationAssertion(Annotation( ) Annotation( "UBERON:cjm"^^xsd:string) "An area of conducting tissue between the atria and the ventricles of the heart that conducts the normal electrical impulse from the atria to the ventricles.") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001474") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "DOI:10.1152/physrev.00006.2003 Moorman AFM, Christoffels VM, Cardiac Chamber Formation: Development, Genes, and Evolution. Physiological Reviews (2003)") "Three major adaptations, or 'novel cardiac components', that were not present in the ancestor chordate heart tube can be distinguished in the lower vertebrate heart: the atrium, ventricle, and possibly the muscular sinus venosus. Furthermore, within the ventricular component a compact outer myocardial component and an interiorly localized extensive trabecular component can be distinguished. The specific activation of the ventricle adds to its complexity as follows. The depolarizing impulse travels rapidly from the atrioventricular node toward the apex and then toward the conal region, achieving activation from apex to base.[uncertain][VHOG]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0005689") AnnotationAssertion( "EFO:0000276") AnnotationAssertion( "EHDAA2:0004183") AnnotationAssertion( "EMAPA:35153") AnnotationAssertion( "FMA:9478") AnnotationAssertion( "GAID:558") AnnotationAssertion( "MA:0000095") AnnotationAssertion( "MAT:0000498") AnnotationAssertion( "MESH:D001283") AnnotationAssertion( "NCIT:C32161") AnnotationAssertion( "OpenCyc:Mx4rMfD91mMcEd2AAABQjYGu0g") AnnotationAssertion( "TAO:0005070") AnnotationAssertion(Annotation( "ncithesaurus:Atrioventricular_Node") "UMLS:C0004247") AnnotationAssertion( "VHOG:0001474") AnnotationAssertion( "ZFA:0005070") AnnotationAssertion(Annotation( "FMA:9478") "AV nodal muscle tissue") AnnotationAssertion(Annotation( "FMA:9478") Annotation( "MA:0000095") "AV node") AnnotationAssertion(Annotation( "FMA:9478") "Aschoff-Tawara node") AnnotationAssertion(Annotation( "FMA:9478") "atrioventricular nodal muscle tissue") AnnotationAssertion(Annotation( "FMA:9478") "node of Tawara") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) Annotation( ) "nodus atrioventricularis") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "EMAPA:35153") "A-V node") AnnotationAssertion(Annotation( "EMAPA:35153") "atrio-ventricular node") AnnotationAssertion(Annotation( "TAO:0005070") "atriovetricular node") AnnotationAssertion(Annotation( "ZFA:0005070") "downstream pacemaker") AnnotationAssertion(Annotation( ) Annotation( ) "nodus atrioventricularis") AnnotationAssertion( "UBERON:0002352") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "atrioventricular node") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/5/50/ConductionsystemoftheheartwithouttheHeart.png"^^xsd:anyURI) AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/9/92/Gray501.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "cjm"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (bundle of His) AnnotationAssertion(Annotation( "GO:0003166") Annotation( "GOC:mtg_heart") "A part of the His-Purkinje system that transmits signals from the AV node to the cardiac Purkinje fibers[GO].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:35152") AnnotationAssertion( "FMA:9484") AnnotationAssertion( "GAID:559") AnnotationAssertion( "MA:0002576") AnnotationAssertion( "MESH:D002036") AnnotationAssertion( "NCIT:C32160") AnnotationAssertion( "OpenCyc:Mx4rUv1WcGPJEd2AAABQjYGu0g") AnnotationAssertion(Annotation( "ncithesaurus:Atrioventricular_Bundle") "UMLS:C0006382") AnnotationAssertion( "galen:BundleOfHis") AnnotationAssertion( "AV bundle") AnnotationAssertion(Annotation( ) "AVB") AnnotationAssertion( "His bundle") AnnotationAssertion(Annotation( "EMAPA:35152") "atrio-ventricular bundle") AnnotationAssertion( "atrioventricular bundle") AnnotationAssertion(Annotation( "FMA:9484") "atrioventricular bundle muscle tissue") AnnotationAssertion(Annotation( "FMA:9484") "atrioventricular fasciculus") AnnotationAssertion(Annotation( "FMA:9484") Annotation( "GO:0003166") "bundle of His") AnnotationAssertion(Annotation( ) Annotation( ) "fasciculus atrioventricularis") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "EMAPA:35152") "A-V bundle") AnnotationAssertion( "UBERON:0002353") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "bundle of His") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/5/50/ConductionsystemoftheheartwithouttheHeart.png"^^xsd:anyURI) AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/b/b6/ECG_Principle_fast.gif"^^xsd:anyURI) SubClassOf(Annotation( "cjm"^^xsd:string) ) SubClassOf( ) SubClassOf(Annotation( "GO"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (cardiac Purkinje fiber) AnnotationAssertion(Annotation( "GO:0003165") "The cardiac Purkinje fiber is part of the cardiac conduction system that receives signals from the bundle of His and innervates the ventricular cardiac muscle.") AnnotationAssertion( "UBERON:0004147") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0001735") AnnotationAssertion( "EMAPA:35718") AnnotationAssertion( "FMA:9492") AnnotationAssertion( "GAID:560") AnnotationAssertion( "MA:0000096") AnnotationAssertion( "MESH:D011690") AnnotationAssertion( "NCIT:C33430") AnnotationAssertion(Annotation( "ncithesaurus:Purkinje_Fiber") "UMLS:C0034144") AnnotationAssertion(Annotation( "FMA:9492") Annotation( "MA:0000096") "Purkinje fiber") AnnotationAssertion(Annotation( "BTO:0001735") Annotation( "GO:0003165") "cardiac Purkinje fiber") AnnotationAssertion(Annotation( ) "myofibra conducens cardiacus") AnnotationAssertion(Annotation( ) "subendocardial branch") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0001735") "heart Purkinje fiber") AnnotationAssertion( "UBERON:0002354") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "cardiac Purkinje fiber") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/9/96/Gray498.png"^^xsd:anyURI) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pelvic region of trunk) AnnotationAssertion(Annotation( ) Annotation( ) Annotation( ) "The lower segment of the trunk, inferioposterior to the abdomen proper, in the transition area between the trunk and the lower limbs.") AnnotationAssertion( "pelvic") AnnotationAssertion(Annotation( "MA"^^xsd:string) "MA and FMA differ in what they consider to be parts of the pelvis. MA includes ureter, urethra, urinary bladder, reproductive organs") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0001006") AnnotationAssertion( "CALOHA:TS-2227") AnnotationAssertion( "EFO:0002805") AnnotationAssertion( "EMAPA:35931") AnnotationAssertion( "EV:0100012") AnnotationAssertion( "FMA:9578") AnnotationAssertion( "GAID:87") AnnotationAssertion( "MA:0000030") AnnotationAssertion( "MESH:A01.673") AnnotationAssertion( "NCIT:C12767") AnnotationAssertion( "OpenCyc:Mx4rvVjiTJwpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Pelvis") "UMLS:C0030797") AnnotationAssertion( "galen:Pelvis") AnnotationAssertion(Annotation( "FMA:9578") "lesser pelvis") AnnotationAssertion( "pelvic region") AnnotationAssertion(Annotation( "FMA:9578") Annotation( "MA:0000030") "pelvis") AnnotationAssertion( "pelvis region") AnnotationAssertion(Annotation( "FMA:9578") "true pelvis") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002355") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "pelvic region of trunk") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (perineum) AnnotationAssertion(Annotation( ) Annotation( "FMA:9579") "Subdivision of trunk proper, which is demarcated from the pelvis by the inferior surface of the pelvic diaphragm and from the lower limbs by the perineofemoral lines; together with the thorax, abdomen, and pelvis, it constitutes the trunk[FMA].") AnnotationAssertion( "perianal") AnnotationAssertion(Annotation( "FMA"^^xsd:string) "FMA has class anal part of perineum, which may be the same as what EHDAA2 calls perineum") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EFO:0004141") AnnotationAssertion( "EHDAA2:0004015") AnnotationAssertion( "EMAPA:36628") AnnotationAssertion( "EV:0100013") AnnotationAssertion( "FMA:9579") AnnotationAssertion( "GAID:90") AnnotationAssertion( "MA:0002466") AnnotationAssertion( "MESH:D010502") AnnotationAssertion( "NCIT:C33301") AnnotationAssertion( "OpenCyc:Mx4rvcHSh5wpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Perineum") "UMLS:C0031066") AnnotationAssertion( "galen:Perineum") AnnotationAssertion( "perineal region") AnnotationAssertion(Annotation( "FMA:9579") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "regio perinealis") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002356") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "perineum") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/e/ef/Gray406.png"^^xsd:anyURI) SubClassOf(Annotation( "FMA-modified") ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (serous pericardium) AnnotationAssertion(Annotation( ) Annotation( ) "Serous membrane which is divided into parietal and visceral serous pericardium.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:19030") AnnotationAssertion( "FMA:9582") AnnotationAssertion( "MA:0002739") AnnotationAssertion(Annotation( "FMA:9582") "serous portion of pericardium") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "pericardium serosum") AnnotationAssertion( "UBERON:0002357") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "serous pericardium") SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (peritoneum) AnnotationAssertion(Annotation( "VHOG:0001257") "A serous membrane that lines the peritoneal cavity[VHOG,modified].") AnnotationAssertion( "TODO - in ZFA is_a epithelium") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0005120") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "An epithelium that lines the peritoneal cavity.[TAO]") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0010814") Annotation( "AAO"^^xsd:string) Annotation( "AAO:JMG") "Serous membrane that forms the lining of the abdominal cavity or the coelom. It covers most of the intra-abdominal organs, supports the abdominal organs, and serves as a conduit for their blood and lymph vessels and nerves. It is composed of a layer of mesothelium.[AAO]") AnnotationAssertion( "peritoneal") AnnotationAssertion(Annotation( "MA"^^xsd:string) "todo: check MA/EMAPA.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010814") AnnotationAssertion( "BTO:0001472") AnnotationAssertion( "CALOHA:TS-2072") AnnotationAssertion( "EV:0100087") AnnotationAssertion( "FMA:9584") AnnotationAssertion( "GAID:18") AnnotationAssertion( "MA:0000449") AnnotationAssertion( "MESH:A01.047.025.600") AnnotationAssertion( "NCIT:C12770") AnnotationAssertion( "OpenCyc:Mx4rvjJ72ZwpEbGdrcN5Y29ycA") AnnotationAssertion( "TAO:0005120") AnnotationAssertion(Annotation( "ncithesaurus:Peritoneum") "UMLS:C0031153") AnnotationAssertion( "VHOG:0001257") AnnotationAssertion( "XAO:0000139") AnnotationAssertion( "ZFA:0005120") AnnotationAssertion( "galen:Peritoneum") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "VHOG:0001257") "peritonaeum") AnnotationAssertion( "UBERON:0002358") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "peritoneum") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/5/5f/Gray1040.png"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "MP"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (fibrous pericardium) AnnotationAssertion(Annotation( "FMA:9586") "Membrane organ which is attached to the pericardial sac proper and the central tendon of diaphragm and is continuous with the pretracheal fascia.[FMA].") AnnotationAssertion( "most superficial part of pericardium; continuous with the outer adventitial layer of the neighboring great blood vessels. [Wikipedia:Pericardium]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:19029") AnnotationAssertion( "FMA:9586") AnnotationAssertion( "MA:0002738") AnnotationAssertion( "fibrous portion of pericardium") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "pericardium fibrosum") AnnotationAssertion( "UBERON:0002359") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "fibrous pericardium") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "WP"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (meninx) AnnotationAssertion(Annotation( ) Annotation( ) Annotation( "FMA:9589") "Membrane organ that surrounds the brain and the spinal cord.") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001295") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( ) "Membrane covering the brain and spinal cord. It is represented by a single layer in fishes, two in amphibians, reptiles and birds and three in mammals (named dura mater, arachnoid and pia mater). [TFD][VHOG]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001295") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0072528305 Kardong KV, Vertebrates: Comparative Anatomy, Function, Evolution (2006) p.639"^^xsd:string) "In fishes, the meninges consist of a single membrane, the primitive meninx, wrapped around the brain and spinal cord. With the adoption of terrestrial life, the meninges doubled. In amphibians, reptiles, and birds, the meninges include a thick outer dura mater derived from mesoderm and a thin inner secondary meninx. (...) In mammals, the dura mater persists, but division of the secondary meninx yields both the arachnoid and the pia mater from ectomesoderm.[well established][VHOG]") AnnotationAssertion( "meningeal") AnnotationAssertion( "Whereas cyclostomes and fishes only have a single envelope called the primitive meninx, amphibians have two layers, consisting of an outer dura mater which is extremely dense and protective, and a pia-arachnoid or secondary meninx which is more delicate and vascular. Mammals have three meninges: pia mater (which follows all the convolutions of the brain and is the most interior), the arachnoid layer (which is delicate and sends strands to the pia mater), and the dura mater (the outer, more protective meninx).") AnnotationAssertion(Annotation( "FMA"^^xsd:string) Annotation( "https://github.com/obophenotype/uberon/issues/1261") "Not consider part of the CNS/neuraxis in FMA") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0000144") AnnotationAssertion( "CALOHA:TS-1177") AnnotationAssertion( "EFO:0000867") AnnotationAssertion( "EMAPA:32660") AnnotationAssertion( "EV:0100312") AnnotationAssertion( "FMA:9589") AnnotationAssertion( "GAID:687") AnnotationAssertion( "MA:0001113") AnnotationAssertion( "MAT:0000113") AnnotationAssertion( "MESH:D008578") AnnotationAssertion( "NCIT:C12348") AnnotationAssertion( "NLXANAT:090204") AnnotationAssertion( "OpenCyc:Mx4rwDOl8JwpEbGdrcN5Y29ycA") AnnotationAssertion( "TAO:0001355") AnnotationAssertion(Annotation( "ncithesaurus:Meninges") "UMLS:C0025285") AnnotationAssertion( "VHOG:0001295") AnnotationAssertion( "ZFA:0001355") AnnotationAssertion( "layer of meninges") AnnotationAssertion( "meningeal layer") AnnotationAssertion(Annotation( "VHOG:0001295") "meninx primitiva") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002360") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "meninx") AnnotationAssertion( "Illu:meninges.jpg"^^xsd:anyURI) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "Bgee:AN"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (pia mater) AnnotationAssertion(Annotation( "NLXANAT:090209") "The innermost layer of the leptomeninges, consisting of a delicate membrane closely covering the surface of the brain and spinal cord,and lying under the arachnoid membrane. The pia, unlike the arachnoid, extends into the sulci in gyrencephalic animals.") AnnotationAssertion( "consider adding adjacency relationship to neuraxis (brain+spinal cord); however note that at this time the meninges may be considered part of the nervous system") AnnotationAssertion(Annotation( ) "delicate innermost layer of the meninges-the membranes surrounding the brain and spinal cord. The thin, mesh-like pia mater closely envelops the entire surface of the brain, running down into the fissures of the cortex. It joins with the ependyma which lines the ventricles to form choroid plexuses that produce cerebrospinal fluid. In the spinal cord, the pia mater attaches to the dura mater by the denticular ligaments through the arachnoid membrane. The pia mater is a neural crest derivative[Wikipedia:Pia_mater].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0001635") AnnotationAssertion( "EHDAA2:0004318") AnnotationAssertion( "EHDAA:1367") AnnotationAssertion( "EHDAA:1961") AnnotationAssertion( "EHDAA:2001") AnnotationAssertion( "EHDAA:2099") AnnotationAssertion( "EHDAA:2685") AnnotationAssertion( "EHDAA:2833") AnnotationAssertion( "EHDAA:2867") AnnotationAssertion( "EHDAA:3692") AnnotationAssertion( "EHDAA:3710") AnnotationAssertion( "EHDAA:6566") AnnotationAssertion( "EHDAA:6583") AnnotationAssertion( "EMAPA:32663") AnnotationAssertion( "EV:0100315") AnnotationAssertion( "FMA:9590") AnnotationAssertion( "GAID:693") AnnotationAssertion( "MA:0001116") AnnotationAssertion( "MESH:D010841") AnnotationAssertion( "NCIT:C33321") AnnotationAssertion( "NLXANAT:090209") AnnotationAssertion( "OpenCyc:Mx4rvtesBZwpEbGdrcN5Y29ycA") AnnotationAssertion( "RETIRED_EHDAA2:0001464") AnnotationAssertion(Annotation( "ncithesaurus:Pia_Mater") "UMLS:C0031869") AnnotationAssertion( "pia mater of neuraxis") AnnotationAssertion(Annotation( "NLXANAT:090209") "pial membrane") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NLXANAT:090209") "pia") AnnotationAssertion( "UBERON:0002361") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "pia mater") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/3/31/Gray770-en.svg"^^xsd:anyURI) AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/6/65/Gray770.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (arachnoid mater) AnnotationAssertion(Annotation( ) Annotation( "ISBN:0471888893"^^xsd:string) "A think avascular meningeal layer, between the pia mater and the dural mater. It is separated from the pia mater by the subarachnoid space.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0001636") AnnotationAssertion( "CALOHA:TS-0052") AnnotationAssertion( "EMAPA:32659") AnnotationAssertion( "EV:0100314") AnnotationAssertion( "FMA:9591") AnnotationAssertion( "GAID:688") AnnotationAssertion( "MA:0001114") AnnotationAssertion( "MESH:D001099") AnnotationAssertion( "NCIT:C32136") AnnotationAssertion( "NLXANAT:090208") AnnotationAssertion( "OpenCyc:Mx4rve5HlJwpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Arachnoid_Membrane") "UMLS:C1510935") AnnotationAssertion( "arachnoid") AnnotationAssertion( "arachnoid mater of neuraxis") AnnotationAssertion(Annotation( "NLXANAT:090208") "arachnoid membrane") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0001636") "arachnoidea mater") AnnotationAssertion( "UBERON:0002362") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "arachnoid mater") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/a/a0/Gray767.png"^^xsd:anyURI) SubClassOf( ) # Class: (dura mater) AnnotationAssertion(Annotation( "NLXANAT:090206") "Thick, fibrous meningeal covering surrounding the brain and spinal cord. It is the outermost of the three meningeal coverings. It consists of two layers: the periosteal dura linking the inner surface of the skull and the meningeal dura that lies above the arachnoid dural membrane. The meningeal layer draws away from the periosteal layer and certain locations to form the dural reflections.") AnnotationAssertion(Annotation( "ISBN:0073040584"^^xsd:string) ) AnnotationAssertion(Annotation( ) "the outermost of the three layers of the meninges surrounding the brain and spinal cord. The other two meningeal layers are the pia mater and the arachnoid mater. The dura surrounds the brain and the spinal cord and is responsible for keeping in the cerebrospinal fluid[Wikipedia:Dura_mater].") AnnotationAssertion( "capable of inducing chondrogenesis - requires contact with an epithelium - http://www.ncbi.nlm.nih.gov/pubmed/16496288") AnnotationAssertion( "some ontologies consider dura mater part of the CNS, others dispute this and claim it surrounds it (e.g. DOI:10.1111/joa.12381)[https://github.com/obophenotype/uberon/issues/1261]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0001637") AnnotationAssertion( "CALOHA:TS-2008") AnnotationAssertion( "EMAPA:32664") AnnotationAssertion( "EV:0100313") AnnotationAssertion( "FMA:9592") AnnotationAssertion( "GAID:691") AnnotationAssertion( "MA:0001115") AnnotationAssertion( "MESH:D004388") AnnotationAssertion( "NCIT:C32488") AnnotationAssertion( "NLXANAT:090206") AnnotationAssertion( "OpenCyc:Mx4rvvmzqZwpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Dura_Mater") "UMLS:C0013313") AnnotationAssertion( "dura mater of neuraxis") AnnotationAssertion(Annotation( "NLXANAT:090206") "pachymeninges") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0001637") "dura") AnnotationAssertion( "UBERON:0002363") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "dura mater") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/8/8e/Meninges-en.svg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "definitional"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (tympanic membrane) AnnotationAssertion(Annotation( ) Annotation( ) "A thin membrane that separates the external ear from the middle ear, consisting of two epithelia (one part of the the external accoustic meatus epithelium, the other part of the tympanic cavity epithelium) with a fibrous layer between them. Its function is to transmit sound from the air to the ossicles inside the middle ear. The malleus bone bridges the gap between the eardrum and the other ossicles. Rupture or perforation of the eardrum can lead to conductive hearing loss. [WP,unvetted].") AnnotationAssertion(Annotation( "Wikipedia"^^xsd:string) ) AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001146") Annotation( "VHOG"^^xsd:string) Annotation( ) "The thin membrane which closes externally the cavity of the middle ear and is deeply sited at the bottom of the external auditory meatus. [Dorian_AF, Elsevier's_encyclopaedic_dictionary_of_medicine, Part_B:_Anatomy_(1988)_Amsterdam_etc.:_Elsevier][VHOG]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001146") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0030223693 Liem KF, Bemis WE, Walker WF, Grande L, Functional Anatomy of the Vertebrates: An Evolutionary Perspective (2001) p.418") "In particular, a tympanic membrane was not present in the earliest tetrapods (...). An ear utilizing a tympanic membrane evolved independently at least three times in tetrapods: (1) in the lineage that leads to anurans (frogs), (2) in the line of evolution to turtles and diapsids, and (3) in the late synapsid lineage that gave rise to mammals.[well established][VHOG]") AnnotationAssertion( "The tympanic membrane (TM) has three layers, two epithelia provided by the external acoustic meatus (EAM) and the MEC, derived respectively from the first pharyngeal cleft and pouch, and a mesenchymally derived fibrous stratum") AnnotationAssertion(Annotation( ) "most AOs consider this part of the middle ear, so we go with this and place it in the middle ear as a border to the external, although it could be considered to overlap the external ear in that it has an EAM layer as part - for this reason we do not consider middle and external ear to be spatially disjoint.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:19062") AnnotationAssertion( "EV:0100358") AnnotationAssertion( "FMA:9595") AnnotationAssertion( "GAID:870") AnnotationAssertion( "MA:0000257") AnnotationAssertion( "MESH:A09.246.397.873") AnnotationAssertion( "NCIT:C12502") AnnotationAssertion(Annotation( "ncithesaurus:Tympanic_Membrane") "UMLS:C0041445") AnnotationAssertion( "VHOG:0001146") AnnotationAssertion( "XAO:0000212") AnnotationAssertion( "Rivinus' membrane") AnnotationAssertion( "ear drum") AnnotationAssertion( "eardrum") AnnotationAssertion( "lateral wall of tympanic cavity") AnnotationAssertion( "membranous wall of tympanic cavity") AnnotationAssertion( "myrinx") AnnotationAssertion(Annotation( "FMA:9595") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "paries membranaceus cavi tympani") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "tympanum") AnnotationAssertion( "UBERON:0002364") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "tympanic membrane") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ) SubClassOf(Annotation( "MA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "Wikipedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "cjm"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (exocrine gland) AnnotationAssertion(Annotation( ) "A gland that secretes products (excluding hormones and other chemical messengers) into ducts (duct glands) which lead directly into the external environment[WP]. Typical exocrine glands include sweat glands, salivary glands, mammary glands, stomach, liver, pancreas.") AnnotationAssertion( "Currently this is logically defined by the system it belongs to, but a better system may be base this on presence/absence of ducts. However, the dual nature of the liver should be taken into consideration here. Consider adding subclasses") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AEO:0000097") AnnotationAssertion( "BTO:0000765") AnnotationAssertion( "CALOHA:TS-2012") AnnotationAssertion( "EHDAA2:0003097") AnnotationAssertion( "EMAPA:35327") AnnotationAssertion( "FMA:9596") AnnotationAssertion( "GAID:34") AnnotationAssertion( "MA:0002564") AnnotationAssertion( "MESH:D005088") AnnotationAssertion( "NCIT:C12712") AnnotationAssertion(Annotation( "ncithesaurus:Exocrine_Gland") "UMLS:C0015282") AnnotationAssertion(Annotation( "AEO:0000097") "ducted gland") AnnotationAssertion(Annotation( ) Annotation( ) "glandula exocrina") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002365") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "exocrine gland") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (bulbo-urethral gland) AnnotationAssertion(Annotation( ) Annotation( "MP:anna"^^xsd:string) "Any of the small paired racemose glands below the apex of the prostate in males, located posterolateral to the membranous portion of the urethra at the base of the penis, between the two layers of the fascia of the urogenital diaphragm, in the deep perineal pouch, and enclosed by transverse fibers of the sphincter urethrae membranaceae muscle; homologous to the greater vestibular (Bartholin's) glands in the female[MP].") AnnotationAssertion(Annotation( "BTO") Annotation( "BTO:0001698") "Either of two small racemose glands that are located below the prostate and discharge a component of the seminal fluid into the urethra. They are homologous to the Bartholin's glands in the female[BTO].") AnnotationAssertion(Annotation( "FMA") Annotation( "FMA:9599") "Lobular organ the parenchyma of which consists of glandular acini which communicate the bulbar part of the urethra. Examples: There only two instances, right and left bulbo-urethral glands[FMA]") AnnotationAssertion( "The bulbourethral glands are compound tubulo-alveolar glands.") AnnotationAssertion(Annotation( "ncit"^^xsd:string) "see comments for paraurethral gland - ncita placement may not be correct") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0001698") AnnotationAssertion( "CALOHA:TS-0103") AnnotationAssertion( "EMAPA:19286") AnnotationAssertion( "FMA:9599") AnnotationAssertion( "GAID:387") AnnotationAssertion( "MA:0000401") AnnotationAssertion( "MESH:D002030") AnnotationAssertion( "NCIT:C32395") AnnotationAssertion(Annotation( "ncithesaurus:Cowper_s_Gland") "UMLS:C0006366") AnnotationAssertion(Annotation( "FMA:9599") "Cowper's gland") AnnotationAssertion(Annotation( "FMA:9599") Annotation( ) "Cowper's glands") AnnotationAssertion( "Mery's gland") AnnotationAssertion(Annotation( "MP:anna"^^xsd:string) "Méry gland") AnnotationAssertion(Annotation( "FMA:9599") "bulbourethral gland") AnnotationAssertion(Annotation( "MP:anna"^^xsd:string) Annotation( ) "glandula bulbourethralis") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "EMAPA:19286") "Cowper's gland of male") AnnotationAssertion( "UBERON:0002366") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "bulbo-urethral gland") AnnotationAssertion( "Male:anatomy.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "gland") ObjectSomeValuesFrom( )) # Class: (prostate gland) AnnotationAssertion(Annotation( ) Annotation( "GO:0030850") "The prostate gland is a partly muscular, partly glandular body that is situated near the base of the mammalian male urethra and secretes an alkaline viscid fluid which is a major constituent of the ejaculatory fluid.") AnnotationAssertion( "TODO - FMA treats the gland as part of the prostate - see also FMA:74119.") AnnotationAssertion( "prostatic") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0001129") AnnotationAssertion( "CALOHA:TS-0828") AnnotationAssertion( "EFO:0000858") AnnotationAssertion( "EMAPA:19287") AnnotationAssertion( "EV:0100104") AnnotationAssertion( "FMA:9600") AnnotationAssertion( "GAID:392") AnnotationAssertion( "MA:0000404") AnnotationAssertion( "MAT:0000078") AnnotationAssertion( "MESH:D011467") AnnotationAssertion( "MIAA:0000078") AnnotationAssertion( "NCIT:C12410") AnnotationAssertion( "OpenCyc:Mx4rv6trqZwpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Prostate_Gland") "UMLS:C0033572") AnnotationAssertion( "VHOG:0001261") AnnotationAssertion( "galen:ProstateGland") AnnotationAssertion(Annotation( ) "male prostate") AnnotationAssertion( "prostate") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "prostata") AnnotationAssertion( "UBERON:0002367") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "prostate gland") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/a/a1/Prostatelead.jpg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (endocrine gland) AnnotationAssertion(Annotation( ) "Endocrine glands are glands of the endocrine system that secrete their products directly into the circulatory system rather than through a duct.[WP, modified].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AEO:0000098") AnnotationAssertion( "BTO:0001488") AnnotationAssertion( "CALOHA:TS-1300") AnnotationAssertion( "EHDAA2:0003098") AnnotationAssertion( "EMAPA:35999") AnnotationAssertion( "FMA:9602") AnnotationAssertion( "GAID:335") AnnotationAssertion( "MA:0002563") AnnotationAssertion( "MESH:D004702") AnnotationAssertion( "NCIT:C12704") AnnotationAssertion( "OpenCyc:Mx4rvbkiRZwpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Endocrine_Gland") "UMLS:C0014133") AnnotationAssertion(Annotation( "AEO:0000098") "ductless gland") AnnotationAssertion( "glandula endocrina") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "ductless gland") AnnotationAssertion(Annotation( ) Annotation( ) "glandulae endocrinae") AnnotationAssertion( "UBERON:0002368") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "endocrine gland") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/d/da/Illu_endocrine_system.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (adrenal gland) AnnotationAssertion(Annotation( ) Annotation( "BTO:0000047") "Either of a pair of complex endocrine organs near the anterior medial border of the kidney consisting of a mesodermal cortex that produces glucocorticoid, mineralocorticoid, and androgenic hormones and an ectodermal medulla that produces epinephrine and norepinephrine[BTO].") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0010551") Annotation( "AAO"^^xsd:string) Annotation( "AAO:BJB"^^xsd:string) "Anatomical structure which is found on the surface of the kidney and secretes various hormones including epinephrine, norephinephrine, aldosterone, corticosterone, and cortisol.[AAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001141") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0030223693 Liem KF, Bemis WE, Walker WF, Grande L, Functional Anatomy of the Vertebrates: An Evolutionary Perspective (2001) p.518 and Figure 15-9") "All craniates have groups of cells homologous to the mammalian adrenocortical and chromaffin tissues, but they are scattered in and near the kidneys in fishes. (...) The cortical and chromaffin tissues come together to form adrenal glands in tetrapods.[well established][VHOG]") AnnotationAssertion( "The origin of the adrenal gland is still controversial. It is thought to share the same origin as the kidney and gonads, derived from coelomic epithelium of the urogenital ridge and/or the underlying mesenchyme (Keegan and Hammer, 2002; Morohashi, 1997). We follow Kardong and state homology at the level of the cortex and medulla rather than gland as a whole") AnnotationAssertion( "suprarenal cortex manufactures corticosteroids; suprarenal medulla manufactures epinephrine and norepinephrine; suprarenal medulla receives preganglionic sympathetic innervation from the greater thoracic splanchnic n.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010551") AnnotationAssertion( "BTO:0000047") AnnotationAssertion( "CALOHA:TS-0016") AnnotationAssertion( "EFO:0000238") AnnotationAssertion( "EMAPA:18426") AnnotationAssertion( "EV:0100135") AnnotationAssertion( "FMA:9604") AnnotationAssertion( "GAID:446") AnnotationAssertion( "MA:0000116") AnnotationAssertion( "MAT:0000071") AnnotationAssertion( "MESH:D000311") AnnotationAssertion( "MIAA:0000071") AnnotationAssertion( "NCIT:C12666") AnnotationAssertion( "OpenCyc:Mx4rvXYiz5wpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Adrenal_Gland") "UMLS:C0001625") AnnotationAssertion( "VHOG:0001141") AnnotationAssertion( "XAO:0000164") AnnotationAssertion( "galen:AdrenalGland") AnnotationAssertion(Annotation( ) Annotation( ) "glandula adrenalis") AnnotationAssertion(Annotation( ) Annotation( ) "glandula suprarenalis") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0000047") "adrenal") AnnotationAssertion(Annotation( "BTO:0000047") "adrenal capsule") AnnotationAssertion( "adrenal medulla cell") AnnotationAssertion(Annotation( "BTO:0000047") "atrabiliary capsule") AnnotationAssertion(Annotation( ) "epinephric gland") AnnotationAssertion(Annotation( "BTO:0000047") "epinephros") AnnotationAssertion(Annotation( "BTO:0000047") "glandula suprarenalis") AnnotationAssertion(Annotation( "GO:0030325") Annotation( ) "interrenal gland") AnnotationAssertion(Annotation( "BTO:0000047") "suprarenal capsule") AnnotationAssertion(Annotation( ) "suprarenal gland") AnnotationAssertion( "UBERON:0002369") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "adrenal gland") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/9/9d/Illu_endocrine_system_New.png"^^xsd:anyURI) AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/c/c6/Illu_endocrine_system.jpg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "FMA-abduced-lr"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "Wikipedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (thymus) AnnotationAssertion(Annotation( ) Annotation( "NLM:thymus") "Anatomical structure of largely lymphoid tissue that functions in cell-mediated immunity by being the site where T cells develop.") AnnotationAssertion( "check - a subtype of gland? not in GO. NCIT has thymus and thymus gland. EHDAA2 has ductless gland.") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0010548") Annotation( "AAO"^^xsd:string) Annotation( "AAO:BJB"^^xsd:string) "Anatomical structure which originates as several paired thickenings on the dorsal side of the pharyngeal pouches and secretes thymosin.[AAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000253") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0878932504 Gilbert SF, Developmental Biology (2006) p.558") "A thymus develops in all vertebrates from the endodermal epithelium of certain pharyngeal pouches and from the adjacent ectodermal epithelium. In fishes, all the pouches, or the first four, contribute to thymus formation, but in tetrapods, the number is more restricted. In mammals, only the third and fourth are involved, and the contribution of the third is by far the greater.[well established][VHOG]") AnnotationAssertion( "thymic") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010548") AnnotationAssertion( "BTO:0001374") AnnotationAssertion( "CALOHA:TS-1043") AnnotationAssertion( "EFO:0000860") AnnotationAssertion( "EHDAA2:0002017") AnnotationAssertion( "EHDAA:9119") AnnotationAssertion( "EMAPA:18768") AnnotationAssertion( "EV:0100138") AnnotationAssertion( "FMA:9607") AnnotationAssertion( "GAID:464") AnnotationAssertion( "MA:0000142") AnnotationAssertion( "MAT:0000080") AnnotationAssertion( "MESH:A06.407.850") AnnotationAssertion( "MIAA:0000080") AnnotationAssertion( "NCIT:C12433") AnnotationAssertion( "OpenCyc:Mx4rvpIympwpEbGdrcN5Y29ycA") AnnotationAssertion( "TAO:0001078") AnnotationAssertion(Annotation( "ncithesaurus:Thymus_Gland") "UMLS:C0040113") AnnotationAssertion( "VHOG:0000253") AnnotationAssertion( "XAO:0000163") AnnotationAssertion( "ZFA:0001078") AnnotationAssertion( "thymus gland") AnnotationAssertion( "thymus organ") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002370") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "thymus") AnnotationAssertion( "Illu:thymus.jpg"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "ZFA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (bone marrow) AnnotationAssertion(Annotation( "MGI:cwg"^^xsd:string) Annotation( "MP:0002397") "The soft tissue that fills the cavities of bones.") AnnotationAssertion( "TODO - create superclass for bone marrow / head kidney. both are portions of tissue in the hematopoetic system. also consider adding as subclass of zone of bone organ for consistency with FMA. See also: Leydig and epigonal organs") AnnotationAssertion( "consider placement of NCIT:C53466 medullary bone") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001218") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "DOI:10.1146/annurev.cellbio.22.010605.093317 Hartenstein V, Blood Cells and Blood Cell Development in the Animal Kingdom. Annual Review of Cell and Developmental Biology (2006)") "The bone marrow is the hematopoietic organ in all vertebrates but fishes, in which hematopoiesis occurs in the kidney.[well established][VHOG]") AnnotationAssertion( "In adults, marrow in large bones produces new blood cells[Wikipedia:Bone_marrow]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0011007") AnnotationAssertion( "BTO:0000141") AnnotationAssertion( "BTO:0000829") AnnotationAssertion( "CALOHA:TS-0087") AnnotationAssertion( "EFO:0000868") AnnotationAssertion( "EMAPA:32760") AnnotationAssertion( "EV:0100046") AnnotationAssertion( "FMA:9608") AnnotationAssertion( "GAID:1287") AnnotationAssertion( "MA:0000134") AnnotationAssertion( "MAT:0000084") AnnotationAssertion( "MESH:D001853") AnnotationAssertion( "MIAA:0000084") AnnotationAssertion( "NCIT:C12431") AnnotationAssertion( "OpenCyc:Mx4rvVm-FpwpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Bone_Marrow") "UMLS:C0005953") AnnotationAssertion( "VHOG:0001218") AnnotationAssertion( "XAO:0000123") AnnotationAssertion( "galen:BoneMarrow") AnnotationAssertion(Annotation( "BTO:0000141") Annotation( "FMA:9608") Annotation( ) "medulla ossea") AnnotationAssertion(Annotation( ) Annotation( "BTO:0000141") Annotation( ) "medulla ossium") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0000141") "medulla of bone") AnnotationAssertion( "medullary bone") AnnotationAssertion( "UBERON:0002371") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "bone marrow") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/7/74/Gray72-en.svg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA"^^xsd:string) Annotation( "MA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (tonsil) AnnotationAssertion(Annotation( "MGI:cwg"^^xsd:string) Annotation( "MP:0002380") "Either of the two small almond-shaped masses of lymph tissue found on either side of the oropharynx.") AnnotationAssertion( "the term 'tonsil' can be ambiguous, sometimes refering specifically to the palatine tonsil, sometimes generically to include the cecal tonsils of avians. This class represents lymphoid tissue that is part of the tonsillar ring, in the mouth/throat region") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0001387") AnnotationAssertion( "CALOHA:TS-1053") AnnotationAssertion( "EFO:0001401") AnnotationAssertion( "EMAPA:35871") AnnotationAssertion( "EV:0100052") AnnotationAssertion( "FMA:9609") AnnotationAssertion( "GAID:341") AnnotationAssertion( "MA:0000143") AnnotationAssertion( "MESH:A03.867.603.925") AnnotationAssertion( "NCIT:C12802") AnnotationAssertion( "OpenCyc:Mx4rvVivrZwpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Tonsil") "UMLS:C0836921") AnnotationAssertion(Annotation( "ncithesaurus:Tonsilar_Tissue") "UMLS:C1519547") AnnotationAssertion(Annotation( "ncithesaurus:Tonsillar_Lymphoid_Tissue") "UMLS:C1519548") AnnotationAssertion( "VHOG:0001139") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0001387") "Mandel") AnnotationAssertion( "UBERON:0002372") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "tonsil") SubClassOf( ) SubClassOf(Annotation( "cjm"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses( ) # Class: (palatine tonsil) AnnotationAssertion(Annotation( ) "Tonsils on the left and right sides at the back of the throat. one of the mucosa-associated lymphoid tissues (MALT), located at the entrance to the upper respiratory and gastrointestinal tracts to protect the body from the entry of exogenous material through mucosal sites[WP].") AnnotationAssertion(Annotation( ) ) AnnotationAssertion(Annotation( "ISBN:1607950324") "tonsillar fossa develops from dorsal portion of pouch 2. Note that pharyngeal and lingual tonsils do not develop from pharyngeal pouches") AnnotationAssertion( "tonsil") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0004714") AnnotationAssertion( "EFO:0001977") AnnotationAssertion( "EMAPA:35644") AnnotationAssertion( "EV:0100393") AnnotationAssertion( "FMA:9610") AnnotationAssertion( "MA:0000775") AnnotationAssertion( "MAT:0000291") AnnotationAssertion( "MIAA:0000291") AnnotationAssertion( "NCIT:C33250") AnnotationAssertion(Annotation( "ncithesaurus:Palatine_Tonsil") "UMLS:C0040421") AnnotationAssertion( "VHOG:0001140") AnnotationAssertion( "faucial tonsil") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "tonsilla palatina") AnnotationAssertion( "UBERON:0002373") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "palatine tonsil") AnnotationAssertion( "Illu:mouth.jpg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "Wikipedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (metacarpal bone) AnnotationAssertion(Annotation( ) Annotation( ) "A bone that is part of the metacarpal skeleton.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EFO:0003886") AnnotationAssertion( "EMAPA:36158") AnnotationAssertion( "FMA:9612") AnnotationAssertion( "MA:0000302") AnnotationAssertion( "NCIT:C12751") AnnotationAssertion( "OpenCyc:Mx4rv1Bk45wpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Metacarpal_Bone") "UMLS:C0025526") AnnotationAssertion( "galen:Metacarpal") AnnotationAssertion( "metacarpal") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002374") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "metacarpal bone") AnnotationAssertion( "Metacarpals:numbered-en.svg"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "true"^^xsd:string) ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (cricoid cartilage) AnnotationAssertion(Annotation( ) Annotation( "AAO:LAP") Annotation( "FEED:rd") "A cartilaginous ring that provides support for the arytenoid cartilages and forms the caudal part of the larynx.") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0000675") Annotation( "AAO"^^xsd:string) Annotation( "AAO:LAP"^^xsd:string) "Cartilaginous ring that provides support for the arytenoid cartilages. Its ventral part is bent posteriorly to form a V.[AAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001308") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( ) "The ringlike cartilage forming the caudal part of the larynx. [TFD][VHOG]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001308") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0471090588 Hildebrand M, Analysis of vertebrate structure (1983) p.239-241") "(In anura) a dorsal pair of arytenoid cartilages (...), which support vocal cords, and a ventral pair (often fused) of cricoid cartilage (...). These cartilages are regarded as derivatives of posterior visceral arches of ancestors. Together they constitute the larynx, a structure characteristic of tetrapods. (...) (In mammals) Paired arytenoid cartilages help support and control the vocal cords. The cricoid cartilage is single. Two additional cartilages are present that are lacking in other vertebrates: a large ventral thyroid cartilage (...) and a cartilage in the epiglottis.[well established][VHOG]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0000675") AnnotationAssertion( "EHDAA2:0000326") AnnotationAssertion( "EHDAA:9393") AnnotationAssertion( "EMAPA:18696") AnnotationAssertion( "FMA:9615") AnnotationAssertion( "GAID:110") AnnotationAssertion( "MA:0001762") AnnotationAssertion( "MESH:A02.165.507.211") AnnotationAssertion( "NCIT:C32400") AnnotationAssertion(Annotation( "ncithesaurus:Cricoid_Cartilage") "UMLS:C0010323") AnnotationAssertion( "VHOG:0001308") AnnotationAssertion(Annotation( ) Annotation( ) "cartilago cricoidea") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "cartilaginis cricoideae") AnnotationAssertion(Annotation( ) "cartilago cricoidea") AnnotationAssertion(Annotation( "AAO:0000675") "cartilago cricotrachealis") AnnotationAssertion(Annotation( ) "cricoid") AnnotationAssertion(Annotation( ) "cricoidea") AnnotationAssertion(Annotation( "VHOG:0001308") "innominate cartilage") AnnotationAssertion(Annotation( ) "krykoid cartilage") AnnotationAssertion( "UBERON:0002375") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "cricoid cartilage") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/5/54/Gray1194.png"^^xsd:anyURI) SubClassOf(Annotation( "MA"^^xsd:string) ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "Wikipedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (cranial muscle) AnnotationAssertion(Annotation( ) "Any skeletal muscle that is part of the head region.") AnnotationAssertion( "UBERON:0003899") AnnotationAssertion( ) AnnotationAssertion( "AAO:0000107") AnnotationAssertion( "BTO:0000021") AnnotationAssertion( "EFO:0003524") AnnotationAssertion( "EHDAA2:0000322") AnnotationAssertion( "EMAPA:18172") AnnotationAssertion( "FMA:9616") AnnotationAssertion( "MA:0000578") AnnotationAssertion( "ZFA:0001652") AnnotationAssertion(Annotation( "ZFA:0001652") "cephalic muscle") AnnotationAssertion( "cephalic musculature") AnnotationAssertion(Annotation( "MA:0000578") "head muscle") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "head muscle organ") AnnotationAssertion(Annotation( "FMA:9616") "muscle of head") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "muscle organ of adult head") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "muscle organ of head") AnnotationAssertion( "musculus caput") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "adult head muscle organ") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "ZFA:0001652") "cranial muscle") AnnotationAssertion( "head muscles") AnnotationAssertion( "UBERON:0002376") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "defined generically so could in theory encompass FBbt:00003260 'skeletal muscle of head', or the muscle of a starfish Aristotle's lantern, but we restrict this to craniates. Skeletal muscles of the head originate from the non-segmented head mesoderm (Noden, 1983; Wachtler et al., 1984)") AnnotationAssertion(rdfs:label "cranial muscle") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2-abduced") ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (muscle of neck) AnnotationAssertion(Annotation( ) "Any muscle that is part of the cervical (neck) region.") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:36050") AnnotationAssertion( "FMA:9617") AnnotationAssertion( "GAID:149") AnnotationAssertion( "MA:0000587") AnnotationAssertion( "MESH:D009334") AnnotationAssertion( "NCIT:C33163") AnnotationAssertion(Annotation( "ncithesaurus:Neck_Muscle") "UMLS:C0027532") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "muscle organ of neck") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "muscle organ of neck (volume)") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "neck (volume) muscle organ") AnnotationAssertion( "neck muscle") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "neck muscle organ") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002377") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "muscle of neck") SubClassOf( ) SubClassOf(Annotation( "prolog"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (muscle of abdomen) AnnotationAssertion(Annotation( ) "Muscle (organ) which is a part of the abdomen. Examples: external oblique, rectus abdominis.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0001261") AnnotationAssertion( "EMAPA:35103") AnnotationAssertion( "FMA:9620") AnnotationAssertion( "GAID:89") AnnotationAssertion( "MA:0000520") AnnotationAssertion( "MESH:D000009") AnnotationAssertion( "NCIT:C32040") AnnotationAssertion( "OpenCyc:Mx4rvlygNJwpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Abdominal_Muscle") "UMLS:C0000739") AnnotationAssertion( "abdomen muscle") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "abdomen muscle organ") AnnotationAssertion( "abdominal muscle") AnnotationAssertion( "abdominal wall muscle") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "muscle organ of abdomen") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "EMAPA:35103") "abdominal wall musculature") AnnotationAssertion( "UBERON:0002378") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "muscle of abdomen") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "prolog"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (perineal muscle) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "Any muscle organ that is part of a perineum [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:36629") AnnotationAssertion( "FMA:9623") AnnotationAssertion( "MA:0000538") AnnotationAssertion( "NCIT:C33300") AnnotationAssertion(Annotation( "ncithesaurus:Perineal_Muscle") "UMLS:C0224382") AnnotationAssertion( "muscle of perineum") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "muscle organ of perineal region") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "muscle organ of perineum") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "perineal region muscle organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "perineum muscle organ") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002379") AnnotationAssertion(rdfs:label "perineal muscle") SubClassOf( ) SubClassOf(Annotation( "prolog"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (trapezius muscle) AnnotationAssertion(Annotation( ) "A large superficial muscle that extends longitudinally from the occipital bone to the lower thoracic vertebrae and laterally to the spine of the scapula (shoulder blade). Its functions are to move the scapulae and support the arm. The trapezius has three functional regions: the superior region (descending part), which supports the weight of the arm; the intermediate region (transverse part), which retracts the scapulae; and the inferior region (ascending part), which medially rotates and depresses the scapulae. [WP,unvetted].") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000834") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0030223693 Liem KF, Bemis WE, Walker WF, Grande L, Functional Anatomy of the Vertebrates: An Evolutionary Perspective (2001) p.345") "The sternomastoid and the three parts of the trapezius are branchiomeric muscles that have secondarily acquired an attachment to the pectoral girdle. They evolved from the fish cucullaris.[well established][VHOG]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:18183") AnnotationAssertion( "FMA:9626") AnnotationAssertion( "MA:0002398") AnnotationAssertion( "NCIT:C33809") AnnotationAssertion(Annotation( "ncithesaurus:Trapezius_Muscle") "UMLS:C0224361") AnnotationAssertion( "VHOG:0000834") AnnotationAssertion( "trapezius") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "musculus trapezius") AnnotationAssertion(Annotation( ) "spinotrapezius") AnnotationAssertion( "UBERON:0002380") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "trapezius muscle") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/6/60/Trapezius.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "external occipital protuberance nuchal ligament medial superior nuchal line spinous processes of vertebrae C7-T12") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "external occipital protuberance nuchal ligament medial superior nuchal line spinous processes of vertebrae C7-T12") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "posterior border of the lateral third of the clavicle acromion process and spine of scapula") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "posterior border of the lateral third of the clavicle acromion process and spine of scapula") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (pectoralis major) AnnotationAssertion(Annotation( ) "The pectoralis major is a thick, fan-shaped muscle, situated at the upper front of the chest wall. It makes up the bulk of the chest muscles in the male and lies under the breast in the female. Underneath the pectoralis major is the pectoralis minor, a thin, triangular muscle. [WP,unvetted].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0001424") AnnotationAssertion( "EHDAA:8311") AnnotationAssertion( "EMAPA:18179") AnnotationAssertion( "FMA:9627") AnnotationAssertion( "MA:0002354") AnnotationAssertion( "NCIT:C33284") AnnotationAssertion(Annotation( "ncithesaurus:Pectoralis_Major") "UMLS:C0585574") AnnotationAssertion( "VHOG:0000895") AnnotationAssertion( "pectoralis major muscle") AnnotationAssertion( "pectoralis major muscle structure") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "musculus pectoralis major") AnnotationAssertion( "UBERON:0002381") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "pectoralis major") AnnotationAssertion( "Pectoralis:major.png"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "lateral pectoral nerve and medial pectoral nerveClavicular head: C5 and C6Sternocostal head: C7 C8 and T1") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "anterior surface of the sternum and the superior six costal cartilages and the aponeurosis of the external oblique muscle") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "anterior surface of the medial half of the clavicle") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "Lateral lip of intertubercular groove of the humerus") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (rectus abdominis muscle) AnnotationAssertion(Annotation( ) "The rectus abdominis muscle is a paired muscle running vertically on each side of the anterior wall of the abdomen. There are two parallel sets of muscles, separated by a midline band of connective tissue called the linea alba (white line). It extends from the pubic symphysis/pubic crest inferiorly to the xiphisternum/xiphoid process and lower costal cartilages (5-7) superiorly. It is contained in the Rectus sheath. The rectus is usually crossed by three fibrous bands licked by the tendinous inscriptions. [WP,modified].") AnnotationAssertion( "While the 'sixpack' is by far the most common configuration of the muscle bellies of the rectus, there exist rare anatomic variations which result in the appearance of eight ('eightpack'), ten, or-even rarer-asymmetrically arranged segments. All these variations are functionally equivalent") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010789") AnnotationAssertion( "EHDAA2:0001595") AnnotationAssertion( "EHDAA:8252") AnnotationAssertion( "EMAPA:18164") AnnotationAssertion( "FMA:9628") AnnotationAssertion( "GAID:142") AnnotationAssertion( "MA:0002364") AnnotationAssertion( "MESH:D017568") AnnotationAssertion( "NCIT:C33449") AnnotationAssertion(Annotation( "ncithesaurus:Rectus_Abdominis") "UMLS:C0206066") AnnotationAssertion( "VHOG:0000863") AnnotationAssertion( "XAO:0004128") AnnotationAssertion(Annotation( "AAO:0010789") "m. rectus abdominis") AnnotationAssertion(Annotation( "AAO:0010789") "musculus rectus abdominis") AnnotationAssertion(Annotation( "MA:0002364") "rectus abdominis") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002382") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "rectus abdominis muscle") AnnotationAssertion( "Rectus:abdominis.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "XAO"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (supraspinatus muscle) AnnotationAssertion(Annotation( ) "The supraspinatus is a relatively small muscle of the upper limb that takes its name from its origin from the supraspinous fossa superior to the spine of the scapula. It is one of the four rotator cuff muscles and also abducts the arm at the shoulder. The spine of the scapula separates the supraspinatus muscle from the infraspinatus muscle, which originates below the spine. [WP,unvetted].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0001967") AnnotationAssertion( "EHDAA:8319") AnnotationAssertion( "EMAPA:18182") AnnotationAssertion( "FMA:9629") AnnotationAssertion( "MA:0002389") AnnotationAssertion( "NCIT:C33709") AnnotationAssertion(Annotation( "ncithesaurus:Supraspinatus") "UMLS:C0584869") AnnotationAssertion( "VHOG:0000848") AnnotationAssertion(Annotation( ) Annotation( ) "musculus supraspinatus") AnnotationAssertion(Annotation( "MA:0002389") "supraspinatus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002383") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "supraspinatus muscle") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/9/99/Arm_muscles_back_numbers.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "Wikipedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "supraspinous fossa of the scapula") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "middle facet of greater tubercle of the humerus") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (connective tissue) AnnotationAssertion(Annotation( ) Annotation( ) Annotation( "GO_REF:0000034"^^xsd:string) Annotation( "PSPUB:0000170"^^xsd:string) Annotation( "VSAO:0000017") "Tissue with cells that deposit non-polarized extracellular matrix including connective tissue fibers and ground substance.") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0000098") Annotation( "AAO"^^xsd:string) Annotation( "AAO:LAP"^^xsd:string) "One of the four types of tissue in traditional classifications. It is largely a category of exclusion rather than one with a precise definition, but there are certain characteristics shared by all or most tissues in this category, such as involvement in structure and support, derived from mesoderm, and characterized largely by the traits of non-living tissue.[AAO]") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0001641") Annotation( "TAO"^^xsd:string) Annotation( "TAO:wd"^^xsd:string) "Portion of tissue that consists of mesodermally derived cells and intercellular matrix comprised of protein fibers and carbohydrates, which supports, ensheathes and binds together other tissues.[TAO]") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "VSAO:0000017") Annotation( "VSAO"^^xsd:string) Annotation( "GO_REF:0000034, http://dx.plos.org/10.1371/journal.pone.0051070") Annotation( "PSPUB:0000170"^^xsd:string) "Tissue with cells that deposit non-polarized extracellular matrix including connective tissue fibers and ground substance.[VSAO]") AnnotationAssertion(Annotation( "MA"^^xsd:string) "MA also has set of connective tissues") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0000098") AnnotationAssertion( "BTO:0000421") AnnotationAssertion( "CALOHA:TS-2009") AnnotationAssertion( "EFO:0000952") AnnotationAssertion( "EMAPA:35251") AnnotationAssertion( "FMA:9640") AnnotationAssertion( "GAID:100") AnnotationAssertion( "MA:0000011") AnnotationAssertion( "MAT:0000301") AnnotationAssertion( "MESH:D003238") AnnotationAssertion( "MIAA:0000301") AnnotationAssertion( "NCIT:C12374") AnnotationAssertion( "OpenCyc:Mx4rv-aBgZwpEbGdrcN5Y29ycA") AnnotationAssertion( "TAO:0001641") AnnotationAssertion(Annotation( "ncithesaurus:Connective_Tissue") "UMLS:C0009780") AnnotationAssertion( "VSAO:0000017") AnnotationAssertion( "XAO:0001017") AnnotationAssertion( "ZFA:0001632") AnnotationAssertion( "galen:ConnectiveTissue") AnnotationAssertion(Annotation( "FMA:9640") "portion of connective tissue") AnnotationAssertion( "textus connectivus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0000421") "Bindegewebe") AnnotationAssertion( "UBERON:0002384") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "connective tissue") SubClassOf( ) # Class: (muscle tissue) AnnotationAssertion(Annotation( ) Annotation( ) Annotation( "GO:0060537") "Muscle tissue is a contractile tissue made up of actin and myosin fibers[GO].") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0000306") Annotation( "AAO"^^xsd:string) Annotation( "AAO:LAP"^^xsd:string) "One of the four types of tissue in traditional classifications. Tissue that contains cells with contractile filaments that move past each other and change the size of the cell. Muscle tissue also is separated into three distinct categories.[AAO]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0000306") AnnotationAssertion( "AEO:0000122") AnnotationAssertion( "CALOHA:TS-0642") AnnotationAssertion( "EHDAA2:0003122") AnnotationAssertion( "EMAPA:32715") AnnotationAssertion( "FMA:9641") AnnotationAssertion( "MA:0002437") AnnotationAssertion( "MESH:D009132") AnnotationAssertion( "NCIT:C12435") AnnotationAssertion(Annotation( "ncithesaurus:Muscle_Tissue") "UMLS:C2328219") AnnotationAssertion( "galen:MuscleTissue") AnnotationAssertion(Annotation( ) "muscular tissue") AnnotationAssertion(Annotation( "FMA:9641") "portion of muscle tissue") AnnotationAssertion( "textus muscularis") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002385") AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "Vertebrate muscle is categorized into three major muscle types defined by their structural and functional properties: skeletal, cardiac and smooth. In Dmel the counterparts are somatic, heart/cardiac and visceral. Here we take a cell type based approach.") AnnotationAssertion(rdfs:label "muscle tissue") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses( ) # Class: (forelimb zeugopod) AnnotationAssertion(Annotation( "PHENOSCAPE:curators"^^xsd:string) "The middle limb segment of the pectoral free limb, between the autopod and stylopod segments. Includes as parts the forelimb zeugopodial skeleton, which includes as parts the radius and ulna, or their cartilage precursors, or evolutionary variants.") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000341") Annotation( "VHOG"^^xsd:string) Annotation( ) "The middle forelimb region. [Evolution, Fourth_Edition_(2006)_Boston_etc.:_McGraw-Hill, Function, Vertebrates:_Comparative_Anatomy, p.321, see_Kardong_KV][VHOG]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000341") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0198540472 Janvier P, Early vertebrates (1996) p.268"^^xsd:string) "Most anatomists now agree that the three proximal bones of the tetrapod limbs are homologous to the two or three proximal elements of the paired fin skeleton of other sarcopterygians, that is the humerus-femur, radius-tibia, and ulna-fibula.[well established][VHOG]") AnnotationAssertion( "Naming conventions for pod terms under discussion within phenoscape group. TODO - add distinct term for skeleton and place AAO class here") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0001447") AnnotationAssertion( "CALOHA:TS-2205") AnnotationAssertion( "EFO:0003053") AnnotationAssertion( "EHDAA2:0000553") AnnotationAssertion( "EHDAA:4172") AnnotationAssertion( "EHDAA:6218") AnnotationAssertion( "EMAPA:17417") AnnotationAssertion( "FMA:9663") AnnotationAssertion( "GAID:55") AnnotationAssertion( "MA:0000034") AnnotationAssertion( "MESH:D005542") AnnotationAssertion( "NCIT:C32628") AnnotationAssertion( "OpenCyc:Mx4rvVjnmpwpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Forearm") "UMLS:C0016536") AnnotationAssertion( "VHOG:0000341") AnnotationAssertion( "VSAO:0005058") AnnotationAssertion( "galen:Forearm") AnnotationAssertion( "antebrachial region") AnnotationAssertion(Annotation( ) "antebrachium") AnnotationAssertion(Annotation( "VSAO:0005058") "antebrachium") AnnotationAssertion( "antibrachium") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "arm middle limb segment") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "arm zeugopod") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "brachial region middle limb segment") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "brachial region zeugopod") AnnotationAssertion( "forearm") AnnotationAssertion( "forelimb epipodium") AnnotationAssertion( "forelimb zeugopodium") AnnotationAssertion( "forelimb zygopod") AnnotationAssertion( "intermediate segment of free upper limb") AnnotationAssertion(Annotation( "MA:0000034") Annotation( ) "lower arm") AnnotationAssertion( "lower segment of arm") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "middle limb segment of arm") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "middle limb segment of brachial region") AnnotationAssertion(Annotation( ) "middle limb segment of forelimb") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "middle limb segment of proximal segment of free upper limb") AnnotationAssertion(Annotation( "FMA:9663") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "regio antebrachialis") AnnotationAssertion( "zeugopod of arm") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "zeugopod of brachial region") AnnotationAssertion( "zeugopod of forelimb") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "zeugopod of proximal segment of free upper limb") AnnotationAssertion(Annotation( "NCBITaxon:8782"^^xsd:string) Annotation( "OBOL:automatic"^^xsd:string) Annotation( ) "wing zeugopod") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "antebrachium") AnnotationAssertion( "fore epipodium") AnnotationAssertion( "UBERON:0002386") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "forelimb zeugopod") AnnotationAssertion( "Forearm:labeled.png"^^xsd:anyURI) AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/3/3b/Veins.jpg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "MA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pes) AnnotationAssertion(Annotation( ) Annotation( ) "Distal portion of the hind limb, including tarsal region, metatarsal region and digits.") AnnotationAssertion( "pedal") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0000476") AnnotationAssertion( "CALOHA:TS-0377") AnnotationAssertion( "EFO:0003065") AnnotationAssertion( "EHDAA2:0000546") AnnotationAssertion( "EMAPA:17459") AnnotationAssertion( "FMA:9664") AnnotationAssertion( "GAID:40") AnnotationAssertion( "MA:0000044") AnnotationAssertion( "MESH:D005528") AnnotationAssertion( "NCIT:C32622") AnnotationAssertion( "OpenCyc:Mx4rvVi-k5wpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Foot") "UMLS:C0016504") AnnotationAssertion( "VHOG:0000350") AnnotationAssertion( "galen:Foot") AnnotationAssertion(Annotation( "MA:0000044") Annotation( ) "foot") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "hindlimb autopod") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "hindlimb autopodium") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "hindlimb distal free limb segment") AnnotationAssertion(Annotation( ) "pes") AnnotationAssertion( "terminal segment of free lower limb") AnnotationAssertion( "hind foot") AnnotationAssertion(Annotation( "EMAPA:17428") Annotation( "OBOL:automatic"^^xsd:string) Annotation( ) "hind paw") AnnotationAssertion(Annotation( "EMAPA:17428") Annotation( ) "hind-paw") AnnotationAssertion(Annotation( ) "hindfeet") AnnotationAssertion( "hindfoot") AnnotationAssertion( "hindfoot of quadruped") AnnotationAssertion(Annotation( "MA:0000044") Annotation( ) "hindpaw") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "VHOG:0000350") "hind limb autopodium") AnnotationAssertion( "UBERON:0002387") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "pes") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/a/ae/Male_Right_Foot_1.jpg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (manual digit) AnnotationAssertion(Annotation( ) "A digit that is part of a manus (hand).") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0000857") Annotation( "AAO"^^xsd:string) Annotation( "AAO:LAP"^^xsd:string) "One of the fingers of the manus.[AAO]") AnnotationAssertion( "UBERON:0000028") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0000857") AnnotationAssertion( "BTO:0004669") AnnotationAssertion( "EHDAA2:0000404") AnnotationAssertion( "EMAPA:32642") AnnotationAssertion( "FMA:9666") AnnotationAssertion( "GAID:57") AnnotationAssertion( "MA:0000041") AnnotationAssertion( "MESH:D005385") AnnotationAssertion( "NCIT:C32608") AnnotationAssertion( "NLXANAT:20090602") AnnotationAssertion( "OpenCyc:Mx4rvVi_f5wpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Finger") "UMLS:C0016129") AnnotationAssertion( "XAO:0003036") AnnotationAssertion( "galen:Finger") AnnotationAssertion(Annotation( "FMA:9666") "digit of hand") AnnotationAssertion( "digit of manus") AnnotationAssertion( "digitus manus") AnnotationAssertion(Annotation( "FMA:9666") "finger") AnnotationAssertion(Annotation( "AAO:0000857") Annotation( "XAO:0003036") "fore digit") AnnotationAssertion( "forelimb digit") AnnotationAssertion(Annotation( "MA:0000041") "hand digit") AnnotationAssertion(Annotation( ) Annotation( ) "manual digit (phalangeal portion) plus soft tissue") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002389") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "manual digit") SubClassOf( ) SubClassOf(Annotation( "PHENOSCAPE:ni"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (hematopoietic system) AnnotationAssertion(Annotation( ) "Anatomical system that is involved in the production of hematopoietic cells.") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0011002") Annotation( "AAO"^^xsd:string) Annotation( "AAO:EJS"^^xsd:string) "Anatomical system that consists of the blood and blood forming tissues.[AAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001624") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "DOI:10.1016/j.coph.2010.05.004 Ellett F, Lieschke GJ, Zebrafish as a model for vertebrate hematopoiesis. Current Opinion in Pharmacology (2010)") "Zebrafish developmental hematopoiesis shows close correspondence to the development of the mammalian hematopoietic system and is regulated by conserved molecular pathways.[well established][VHOG]") AnnotationAssertion( "hematopoietic") AnnotationAssertion(Annotation( "WP"^^xsd:string) "In humans this is primarily the bone marrow, spleen, tonsils, and lymph nodes") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0011002") AnnotationAssertion( "BTO:0000570") AnnotationAssertion( "CALOHA:TS-0449") AnnotationAssertion( "EFO:0000798") AnnotationAssertion( "EMAPA:35402") AnnotationAssertion( "EV:0100045") AnnotationAssertion( "FMA:9667") AnnotationAssertion( "GAID:1008") AnnotationAssertion( "MA:0002434") AnnotationAssertion( "MAT:0000022") AnnotationAssertion( "MESH:D006413") AnnotationAssertion( "MIAA:0000022") AnnotationAssertion( "NCIT:C12909") AnnotationAssertion( "TAO:0005023") AnnotationAssertion(Annotation( "ncithesaurus:Hematopoietic_System") "UMLS:C0018957") AnnotationAssertion( "VHOG:0001624") AnnotationAssertion( "XAO:0000122") AnnotationAssertion( "ZFA:0005023") AnnotationAssertion( "haematological system") AnnotationAssertion( "haemopoietic system") AnnotationAssertion( "organa haemopoietica") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0000570") "Blutbildungssystem") AnnotationAssertion( "haematopoietic system") AnnotationAssertion( "hematological system") AnnotationAssertion( "hematolymphoid system") AnnotationAssertion( "hemopoietic system") AnnotationAssertion( "UBERON:0002390") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "hematopoietic system") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "definitional"^^xsd:string) ObjectSomeValuesFrom( )) DisjointClasses( ) DisjointClasses( ) DisjointClasses( ) DisjointClasses( ) # Class: (lymph) AnnotationAssertion(Annotation( ) "Lymph is the fluid that is formed when interstitial fluid enters the conduits of the lymphatic system through lymph capillaries[WP].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0000855") AnnotationAssertion( "CALOHA:TS-0580") AnnotationAssertion( "EFO:0000871") AnnotationAssertion( "ENVO:02000041") AnnotationAssertion( "EV:0100049") AnnotationAssertion( "FMA:9671") AnnotationAssertion( "GAID:1186") AnnotationAssertion( "MA:0002520") AnnotationAssertion( "MAT:0000055") AnnotationAssertion( "MESH:A12.207.630") AnnotationAssertion( "MIAA:0000055") AnnotationAssertion( "NCIT:C13252") AnnotationAssertion( "OpenCyc:Mx4rvpDOU5wpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Lymph") "UMLS:C0024202") AnnotationAssertion( "VHOG:0001590") AnnotationAssertion( "ZFA:0005658") AnnotationAssertion( "galen:Lymph") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "lympha") AnnotationAssertion( "UBERON:0002391") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "lymph") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/1/19/Illu_lymph_capillary.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (nasolacrimal duct) AnnotationAssertion(Annotation( "ISBN:0-683-40008-8"^^xsd:string) Annotation( "MP:0008969") "The paired channels leading from the lacrimal sacs to the inferior meatus of the nose, through which tears are conducted through the nasal cavity.") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000664") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0072528305 Kardong KV, Vertebrates: Comparative Anatomy, Function, Evolution (2006) p.256") "The nasolacrimal duct is probably homologous to the posterior (excurrent) naris of actinopterygian fishes.[uncertain][VHOG]") AnnotationAssertion( "the nasolacrimal duct, the sac is lined by stratified columnar epithelium with mucus-secreting goblet cells, and is surrounded by connective tissue") AnnotationAssertion(Annotation( "VHOG:0000664") "nasolacrimal duct - posterior naris") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0000643") AnnotationAssertion( "EHDAA2:0001237") AnnotationAssertion( "EHDAA:7849") AnnotationAssertion( "EHDAA:9094") AnnotationAssertion( "EMAPA:17853") AnnotationAssertion( "FMA:9703") AnnotationAssertion( "GAID:902") AnnotationAssertion( "MA:0001299") AnnotationAssertion( "MESH:D009301") AnnotationAssertion( "NCIT:C33161") AnnotationAssertion( "OpenCyc:Mx4rv6PJy5wpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Nasolacrimal_Duct") "UMLS:C0027437") AnnotationAssertion( "VHOG:0000664") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "d. nasolacrimalis") AnnotationAssertion(Annotation( ) "tear duct") AnnotationAssertion( "UBERON:0002392") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "nasolacrimal duct") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/c/cf/Gray896.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pharyngotympanic tube) AnnotationAssertion(Annotation( ) Annotation( "FMA:FMA"^^xsd:string) "Organ with organ cavity which connects the cavity of the middle ear to the cavity of the pharynx. Examples: There are only two pharyngotympanic tubes, the right and the left pharyngotympanic tubes.[FMA].") AnnotationAssertion( "we follow FMA in making this an organ, but include a separate class for the part that is epithelium, which is equivalent to the EHDAA2 structure. From this we infer the developmental relationship") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0000146") Annotation( "AAO"^^xsd:string) Annotation( "AAO:LAP"^^xsd:string) "Furrow on the ventral surface of the otic capsule, and occasionally also the parasphenoid, that houses the Eustachian tube.[AAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001145") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( ) "The narrow channel connecting the nasopharynx and the middle ear. [TFD][VHOG]") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0000146") Annotation( "AAO"^^xsd:string) "relationship loss: part_of braincase and otic capsule skeleton (AAO:0000052)[AAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001145") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0030223693 Liem KF, Bemis WE, Walker WF, Grande L, Functional Anatomy of the Vertebrates: An Evolutionary Perspective (2001) p.417") "The tympanic cavity and auditory tube of an amniote develop from the first embryonic pharyngeal pouch, so they are homologous to the first gill pouch, or spiracle, of a fish. We are uncertain whether this homology strictly applies to the middle ear cavity and auditory tube of lissamphibians, which show certain peculiarities in their development.[uncertain][VHOG]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0000146") AnnotationAssertion( "AAO:0011016") AnnotationAssertion( "EMAPA:17601") AnnotationAssertion( "EV:0100359") AnnotationAssertion( "FMA:9705") AnnotationAssertion( "GAID:869") AnnotationAssertion( "MA:0000255") AnnotationAssertion( "NCIT:C12500") AnnotationAssertion(Annotation( "ncithesaurus:Eustachian_Tube") "UMLS:C0015183") AnnotationAssertion( "VHOG:0001145") AnnotationAssertion( "XAO:0000213") AnnotationAssertion(Annotation( "MA:0000255") "auditory tube") AnnotationAssertion( "internal auditory tube") AnnotationAssertion(Annotation( "MA:0000255") "pharyngo-tympanic tube") AnnotationAssertion(Annotation( "FMA:9705") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "tuba auditiva") AnnotationAssertion(Annotation( "FMA:9705") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "tuba auditoria") AnnotationAssertion( "uberon") AnnotationAssertion( "eustachian tube") AnnotationAssertion(Annotation( ) Annotation( ) "tuba auditiva; tuba auditoria; tuba auditivea") AnnotationAssertion(Annotation( ) "tuba pharyngotympanica") AnnotationAssertion( "UBERON:0002393") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "pharyngotympanic tube") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/4/40/Ear-anatomy-text-small-en.svg"^^xsd:anyURI) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "UBERON:0010062") ObjectSomeValuesFrom( )) # Class: (bile duct) AnnotationAssertion(Annotation( ) Annotation( ) "Any of the ducts that form the biliary tree, carrying bile from the liver to the small intestine.") AnnotationAssertion(Annotation( "ZFA:0001100, ZFA:curator") "A duct that carries bile from the liver to the intestine.") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000212") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( ) "Any of the excretory ducts in the liver that convey bile between the liver and the intestine. [TFD][VHOG]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000212") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "DOI:10.1053/ax.2000.7133 Crawshaw GJ, Weinkle TK, Clinical and pathological aspects of the amphibian liver. Seminars in Avian and Exotic Pet Medicine (2000)") "(...) the amphibian liver has characteristics in common with both fish and terrestrial vertebrates. (...) The histological structure of the liver is similar to that in other vertebrates, with hepatocytes arranged in clusters and cords separated by a meshwork of sinusoids and the presence of the traditional triad of portal venule, hepatic arteriole, and bile duct.[well established][VHOG]") AnnotationAssertion(Annotation( "ZFA"^^xsd:string) "we place the ZFA class here as this fits its textual definition and child nodes. We may recommend a label change for ZFA") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0011019") AnnotationAssertion( "BTO:0000122") AnnotationAssertion( "CALOHA:TS-0075") AnnotationAssertion( "EHDAA2:0000741") AnnotationAssertion( "EMAPA:35171") AnnotationAssertion( "EV:0100091") AnnotationAssertion( "FMA:9706") AnnotationAssertion( "GAID:280") AnnotationAssertion( "MA:0000354") AnnotationAssertion( "MESH:D001652") AnnotationAssertion( "NCIT:C12376") AnnotationAssertion( "OpenCyc:Mx4rvdCds5wpEbGdrcN5Y29ycA") AnnotationAssertion( "TAO:0001100") AnnotationAssertion(Annotation( "ncithesaurus:Bile_Duct") "UMLS:C0005400") AnnotationAssertion( "VHOG:0000212") AnnotationAssertion( "XAO:0000134") AnnotationAssertion( "ZFA:0001100") AnnotationAssertion( "uberon") AnnotationAssertion( "bile tube") AnnotationAssertion(Annotation( "FMA:9706") "biliary duct") AnnotationAssertion(Annotation( "BTO:0000122") "gall duct") AnnotationAssertion(Annotation( "ZFA:0001100") Annotation( ) "hepatic duct") AnnotationAssertion( "UBERON:0002394") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "bile duct") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/5/5d/Digestive_system_showing_bile_duct.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "EMAPA"^^xsd:string) Annotation( "MA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "XAO"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (talus) AnnotationAssertion(Annotation( ) Annotation( ) "A proximal tarsal bone resulting from fusion of intermedium and fibulare.") AnnotationAssertion(Annotation( "WP"^^xsd:string) "The talus is apparently derived from the fusion of three separate bones in the feet of primitive amphibians; the tibiale, articulating with tibia, the intermedium, between the bases of the tibia and fibula, and the fourth centrale, lying in the mid-part of the tarsus. These bones are still partially separate in modern amphibians, which therefore do not have a true talus. The talus forms a considerably more flexible joint in mammals than it does in reptiles. This reaches its greatest extent in artiodactyls, where the distal surface of the bone has a smooth keel to allow greater freedom of movement of the foot, and thus increase running speed") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0002354") AnnotationAssertion( "EMAPA:19135") AnnotationAssertion( "FMA:9708") AnnotationAssertion( "GAID:196") AnnotationAssertion( "MA:0001351") AnnotationAssertion( "MESH:A02.835.232.300.710.780") AnnotationAssertion( "NCIT:C52799") AnnotationAssertion(Annotation( "ncithesaurus:Talus") "UMLS:C0039277") AnnotationAssertion( "galen:Talus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0002354") "astragaloid bone") AnnotationAssertion(Annotation( ) Annotation( "ISBN:0073040584"^^xsd:string) Annotation( "MA:000135") "astragalus") AnnotationAssertion(Annotation( ) Annotation( "ISBN:0073040584"^^xsd:string) "astragalus bone") AnnotationAssertion( "major ankle bone") AnnotationAssertion(Annotation( "BTO:0002354") "os tarsi tibiale") AnnotationAssertion(Annotation( ) "os trigonum") AnnotationAssertion( "UBERON:0002395") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "talus") AnnotationAssertion( "Subtalar:Joint.PNG"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (vomer) AnnotationAssertion(Annotation( "ISBN:0-683-40008-8"^^xsd:string) Annotation( "MP:0000098") "The triangular flat bone of the nasal septum.") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0000308") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "Dermal bone that underlies the mesethmoid and inserts in a fossa on the anteroventral surface of the parasphenoid.[TAO]") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0000633") Annotation( "AAO"^^xsd:string) Annotation( "AAO:LAP"^^xsd:string) "Paired, palatal bones of intramembranous origin that lie ventral to the olfactory region and help to floor the nasal capsules.[AAO]") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0000308") Annotation( "TAO"^^xsd:string) "relationship loss: overlaps autopalatine-vomer joint (TAO:0001784)[TAO]") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0000308") Annotation( "TAO"^^xsd:string) "relationship loss: overlaps mesethmoid-vomer joint (TAO:0001680)[TAO]") AnnotationAssertion(Annotation( ) "In bony fish, the vomers are flattened, paired, bones forming the anterior part of the roof of the mouth, just behind the premaxillary bones. In many species, they have teeth, supplementing those in the jaw proper; in some extinct species the teeth on the vomers were actually larger than the primary set. In amphibians and reptiles, the vomers become narrower, due to the presence of the enlarged choanae (the inner part of the nostrils) on either side, and they may extend further back in the jaw. They are typically small in birds, where they form the upper hind part of the beak, again being located between the choanae. In mammals, the vomers have become narrower still, and are fused into a single, vertically oriented bone. The development of the hard palate beneath the vomer means that the bone is now located in a nasal chamber, separate from the mouth[WP]") AnnotationAssertion(Annotation( "2012-09-06"^^xsd:string) Annotation( "TAO:0000308") Annotation( "TAO"^^xsd:string) Annotation( "Curator"^^xsd:string) "The vomer is paired in some taxa (e.g., Amia) while unpaired in others (e.g., teleosts).[TAO]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0000633") AnnotationAssertion( "FMA:9710") AnnotationAssertion( "MA:0001496") AnnotationAssertion( "NCIT:C33888") AnnotationAssertion( "OpenCyc:Mx4rv6jKWZwpEbGdrcN5Y29ycA") AnnotationAssertion( "TAO:0000308") AnnotationAssertion(Annotation( "ncithesaurus:Vomer") "UMLS:C0242403") AnnotationAssertion( "ZFA:0000308") AnnotationAssertion( "vomer bone") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "TAO:0000308") "prevomer") AnnotationAssertion( "UBERON:0002396") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "vomer") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/7/77/Illu_facial_bones.jpg"^^xsd:anyURI) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (maxilla) AnnotationAssertion(Annotation( ) Annotation( ) "The bone which normally forms the lateral upper jaw in osteichthyans, including tetrapods.") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0000270") Annotation( "TAO"^^xsd:string) Annotation( "TAO:GA_TG") "Dermal bone that forms part of the upper jaw, located antero-ventral to the premaxilla. The maxilla is a paired bone.[TAO]") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0000285") Annotation( "AAO"^^xsd:string) Annotation( "AAO:LAP"^^xsd:string) "Paired, intramembranous bone located on the lateral sides of the skull, posterior to the premaxillae.[AAO]") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0000270") Annotation( "TAO"^^xsd:string) "relationship loss: overlaps autopalatine-maxillary joint (TAO:0001942)[TAO]") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0000270") Annotation( "TAO"^^xsd:string) "relationship loss: overlaps premaxillary-maxillary joint (TAO:0002260)[TAO]") AnnotationAssertion(Annotation( "2012-09-06"^^xsd:string) Annotation( "TAO:0000270") Annotation( "TAO"^^xsd:string) Annotation( "Curator"^^xsd:string) "In some teleosts, the maxilla is located postero-ventral to the supramaxilla. Commonly, the articular process of the maxilla articulates with the autopalatine and ethmoidal region antero-medially. The maxilla is usually the largest bone in the upper jaw assemblage.[TAO]") AnnotationAssertion( "maxillary") AnnotationAssertion( "upper jaw bone") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0000285") AnnotationAssertion( "CALOHA:TS-2217") AnnotationAssertion( "EHDAA2:0001068") AnnotationAssertion( "EHDAA:8043") AnnotationAssertion( "EMAPA:17639") AnnotationAssertion( "FMA:9711") AnnotationAssertion( "GAID:220") AnnotationAssertion( "MA:0001491") AnnotationAssertion( "MESH:D008437") AnnotationAssertion( "NCIT:C26470") AnnotationAssertion( "TAO:0000270") AnnotationAssertion(Annotation( "ncithesaurus:Maxilla") "UMLS:C0024947") AnnotationAssertion( "VHOG:0001021") AnnotationAssertion( "VSAO:0000207") AnnotationAssertion( "ZFA:0000270") AnnotationAssertion( "galen:Maxilla") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "maxillae") AnnotationAssertion(Annotation( ) "maxillary bone") AnnotationAssertion( "UBERON:0002397") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "Fusion of maxilla + premaxilla") AnnotationAssertion(rdfs:label "maxilla") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/a/a7/Gray189.png"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf(Annotation( "VSAO"^^xsd:string) ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "facial series") Annotation( "ISBN:0073040584"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA-abduced-lr"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (manus) AnnotationAssertion(Annotation( ) Annotation( ) "Distal segment of the fore limb, including carpal region, metacarpal region and digits.") AnnotationAssertion( "like all limb segments, this class encompasses both the unformed hand region of the embryo to the fully formed structure complete with skeleton") AnnotationAssertion( "manual") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010803") AnnotationAssertion( "BTO:0004668") AnnotationAssertion( "CALOHA:TS-2213") AnnotationAssertion( "EHDAA2:0000728") AnnotationAssertion( "EMAPA:17428") AnnotationAssertion( "FMA:9712") AnnotationAssertion( "GAID:56") AnnotationAssertion( "MA:0000037") AnnotationAssertion( "MESH:D006225") AnnotationAssertion( "NCIT:C32712") AnnotationAssertion( "NLXANAT:20090603") AnnotationAssertion( "OpenCyc:Mx4rvViGVZwpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Hand") "UMLS:C0018563") AnnotationAssertion( "VHOG:0000344") AnnotationAssertion( "galen:Hand") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "forelimb autopod") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "forelimb autopodium") AnnotationAssertion(Annotation( "MA:0000037") Annotation( ) "hand") AnnotationAssertion(Annotation( "EHDAA2:0000728") "hand region") AnnotationAssertion( "terminal segment of free upper limb") AnnotationAssertion(Annotation( ) "fore foot") AnnotationAssertion(Annotation( "EMAPA:17428") Annotation( "OBOL:automatic"^^xsd:string) Annotation( ) "fore paw") AnnotationAssertion(Annotation( "EMAPA:17428") Annotation( ) "fore-paw") AnnotationAssertion(Annotation( ) "forefeet") AnnotationAssertion(Annotation( ) "forefoot") AnnotationAssertion( "forefoot of quadruped") AnnotationAssertion(Annotation( "MA:0000037") Annotation( ) "forepaw") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002398") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "manus") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/7/76/LeftHand0.jpg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lesser omentum) AnnotationAssertion(Annotation( ) "The double layer of peritoneum that extends from the liver to the lesser curvature of the stomach and the start of the duodenum. [WP,unvetted].") AnnotationAssertion( "exact part of and develops from relationships need to be established") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000357") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( ) "A membranous extension of the peritoneum from the peritoneal layers covering the ventral and the dorsal surfaces of the stomach and the first part of the duodenum. The lesser omentum extends from the portal fissure of the liver to the diaphragm, where the layers separate to enclose the end of the esophagus. It also forms two ligaments, one associated with the liver, the hepatogastric ligament, and the other, the heptatoduodenal ligament, with the duodenum. [TFD][VHOG]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0000991") AnnotationAssertion( "EHDAA:4858") AnnotationAssertion( "EMAPA:17890") AnnotationAssertion( "EV:0100086") AnnotationAssertion( "FMA:9715") AnnotationAssertion( "MA:0001623") AnnotationAssertion( "NCIT:C32981") AnnotationAssertion(Annotation( "ncithesaurus:Lesser_Omentum") "UMLS:C0230260") AnnotationAssertion( "VHOG:0000357") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "gastrohepatic omentum") AnnotationAssertion(Annotation( ) Annotation( ) "omentum minus") AnnotationAssertion(Annotation( ) "small omentum") AnnotationAssertion( "UBERON:0002399") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "lesser omentum") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/c/cf/Gray984.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "MA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) Annotation( "Wikipedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (parietal pleura) AnnotationAssertion(Annotation( ) Annotation( "UBERON:cjm"^^xsd:string) "The outer serous membrane of the pulmonary pleural.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:16776") AnnotationAssertion( "FMA:9733") AnnotationAssertion( "MA:0002488") AnnotationAssertion( "NCIT:C33273") AnnotationAssertion( "OpenCyc:Mx4rvv2Uq5wpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Parietal_Pleura") "UMLS:C0225777") AnnotationAssertion( "VHOG:0001495") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "pleura parietalis") AnnotationAssertion( "UBERON:0002400") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "the part of the pleura external to the visceral pleura. It lines the inner surface of the chest wall, covers the diaphragm, and is reflected over the structures occupying the middle of the thorax") AnnotationAssertion(rdfs:label "parietal pleura") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (visceral pleura) AnnotationAssertion(Annotation( ) Annotation( "UBERON:cjm"^^xsd:string) "The inner serous membrane of the pulmonary pleural. The visceral pleura lines the lungs.") AnnotationAssertion(Annotation( ) "Each lung is invested by an exceedingly delicate serous membrane, the pleura, which is arranged in the form of a closed invaginated sac. A portion of the serous membrane covers the surface of the lung and dips into the fissures between its lobes; it is called the pulmonary pleura (or visceral pleura). The visceral pleura is attached directly to the lungs[Wikipedia:Visceral_pleura].") AnnotationAssertion(Annotation( "FMA"^^xsd:string) "FMA treats this as part of the lungs") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0002205") AnnotationAssertion( "EMAPA:16777") AnnotationAssertion( "FMA:9734") AnnotationAssertion( "MA:0002489") AnnotationAssertion( "NCIT:C33881") AnnotationAssertion( "OpenCyc:Mx4rwNFqppwpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Visceral_Pleura") "UMLS:C0225776") AnnotationAssertion( "VHOG:0001496") AnnotationAssertion(Annotation( "FMA:9734") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "pleura pulmonalis") AnnotationAssertion(Annotation( ) Annotation( ) "pleura visceralis") AnnotationAssertion( "pleura visceralis (pulmonalis)") AnnotationAssertion( "pulmonary visceral pleura") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "EHDAA2:0002205") "lung mesothelium") AnnotationAssertion( "lung pleura") AnnotationAssertion(Annotation( "FMA:9734") Annotation( ) "pulmonary pleura") AnnotationAssertion( "UBERON:0002401") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "visceral pleura") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pleural cavity) AnnotationAssertion(Annotation( ) Annotation( ) "The fluid-filled cavity that lies between the visceral and parietal pleurae.") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000581") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0471090588 Hildebrand M, Analysis of vertebrate structure (1983) p.205-206") "In hagfishes a transverse septum extends upward from the ventral body wall posterior to the heart, partly separating an anterior pericardial cavity from a larger peritoneal cavity. (...) These basic relationships have not been modified by urodeles. The small pericardial cavity remains far forward where it is separated by a transverse septum from the principal coelom, which may now be called a pleuroperitoneal cavity because slender lungs are present. (...) The heart [of other tetrapods] is separated from the lungs (and liver if present) by more or less horizontal partitions that have their origin in the embryo as folds on the serous membrane of the right and left lateral body walls. These grow out to join in the midline of the body. They are called lateral mesocardia (birds) or pleuropericardial membranes. Posteriorly they join the transverse septum to form the adult pericardial membrane, or pericardium. (...) In their partitioning of their coelom, embryonic mammals resemble first early fishes (incomplete partition, posterior to heart, consisting of the transverse septum) and then reptiles (pericardium derived from transverse septum and pleuropericardial membranes). Mammals then separate paired pleural cavities from the peritoneal cavity by a diaphragm. The ventral portion of this organ comes from the transverse septum. The dorsal portion is derived from the dorsal mesentery and from still another pair of outgrowths from the lateral body wall, the pleuroperitoneal membranes.[well established][VHOG]") AnnotationAssertion( "The contraction of the diaphragm creates a negative pressure within the pleural cavity which forces the lungs to expand resulting in passive exhalation and active inhalation. This breathing process can be made forceful through the contraction of the external intercostal muscles which forces the rib cage to expand and add to the negative pressure in the pleural cavity causing the lungs to fill with air. The fluid in the cavity provides lubrication and cushioning") AnnotationAssertion(Annotation( "EHDAA2"^^xsd:string) "the EHDAA2 class of the same is not equivalent. See https://github.com/obophenotype/uberon/issues/86") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0004422") AnnotationAssertion( "EHDAA2:0001475") AnnotationAssertion( "EMAPA:16773") AnnotationAssertion( "EMAPA:16774") AnnotationAssertion( "FMA:9740") AnnotationAssertion( "GAID:95") AnnotationAssertion( "MA:0000055") AnnotationAssertion( "MESH:A01.911.800.650") AnnotationAssertion( "NCIT:C12840") AnnotationAssertion( "OpenCyc:Mx4rwCKAppwpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Pleural_Cavity") "UMLS:C0178802") AnnotationAssertion( "VHOG:0000581") AnnotationAssertion(Annotation( ) Annotation( ) "cavitas pleuralis") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "cavitum pleuralae") AnnotationAssertion(Annotation( ) Annotation( ) "cavitum pleurale") AnnotationAssertion( "UBERON:0002402") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "pleural cavity") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/a/ab/Gray965.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "Wikipedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (internal intercostal muscle) AnnotationAssertion(Annotation( ) Annotation( ) "An intercostal muscle that aids in forced expiration (quiet expiration is a passive process).") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000905") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0471090588 Hildebrand M, Analysis of vertebrate structure (1983) p.193") "Behind the thorax, the lateral group (of muscles in reptiles and mammals) remains essentially as for amphibians. (It breaks into three sheet-like layers: external oblique muscle, the internal oblique, and the transversus). More anteriorly, however, the ribs, now enlarged, penetrate and alter this group of muscles. The transversus is excluded from the thorax and the external and internal obliques become, respectively, the external and internal intercostal muscles, which contribute to the new function of ventilation of the lungs.[well established][VHOG]") AnnotationAssertion( "The internal intercostals are responsible for the depression of the ribs decreasing the transverse dimensions of the thoracic cavity. the innermost intercostal muscle, the deep layers of the internal intercostal muscles which are separated from them by the neurovascular bundle. Both the external and internal muscles are innervated by the intercostal nerves, and are provided by the intercostal arteries and intercostal veins. Their fibers run in opposite directions") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0000875") AnnotationAssertion( "EMAPA:18523") AnnotationAssertion( "FMA:9757") AnnotationAssertion( "MA:0002326") AnnotationAssertion( "NCIT:C32848") AnnotationAssertion( "OpenCyc:Mx4rvlj6HZwpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Internal_Intercostal_Muscle") "UMLS:C1744536") AnnotationAssertion( "VHOG:0000905") AnnotationAssertion( "intercostales internus") AnnotationAssertion( "uberon") AnnotationAssertion( "intercostal muscle internal layer") AnnotationAssertion( "UBERON:0002403") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "internal intercostal muscle") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/f/f2/Gray411.png"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (transversus thoracis) AnnotationAssertion(Annotation( ) "The tranversus thoracis lies internal to the thoracic cage, anteriorly. It is a thin plane of muscular and tendinous fibers, situated upon the inner surface of the front wall of the chest. It is in the same layer as the subcostal muscles. It arises on either side from the lower third of the posterior surface of the body of the sternum, from the posterior surface of the xiphoid process, and from the sternal ends of the costal cartilages of the lower three or four true ribs. Its fibers diverge upward and lateralward, to be inserted by slips into the lower borders and inner surfaces of the costal cartilages of the second, third, fourth, fifth, and sixth ribs. The lowest fibers of this muscle are horizontal in their direction, and are continuous with those of the Transversus abdominis; the intermediate fibers are oblique, while the highest are almost vertical. This muscle varies in its attachments, not only in different subjects, but on opposite sides of the same subject. [WP,unvetted].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:19267") AnnotationAssertion( "FMA:9760") AnnotationAssertion( "MA:0002397") AnnotationAssertion( "NCIT:C53180") AnnotationAssertion(Annotation( "ncithesaurus:Transversus_Thoracis") "UMLS:C1744608") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002404") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "transversus thoracis") AnnotationAssertion( "Transversus:thoracis.png"^^xsd:anyURI) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (immune system) AnnotationAssertion(Annotation( ) "Anatomical system that protects the body from foreign substances, cells, and tissues by producing the immune response and that includes especially the thymus, spleen, lymphoid tissue, lymphocytes including the B cells and T cells, and antibodies.") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001247") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "PMID:21046016 Dzik JM, The ancestry and cumulative evolution of immune reactions. Acta biochimica Polonica (2010)") "The antibody-based immune system defined by the presence of the major histocompatibility complex (MHC), T cell receptor (TCR), B cell receptor (BCR) or recombination activating genes (RAGs) is known beginning from jawed fishes.[well established][VHOG]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0011003") AnnotationAssertion( "BILA:0000104") AnnotationAssertion( "BTO:0005810") AnnotationAssertion( "FMA:9825") AnnotationAssertion( "GAID:328") AnnotationAssertion( "MA:0002711") AnnotationAssertion( "MESH:D007107") AnnotationAssertion( "NCIT:C12735") AnnotationAssertion( "OpenCyc:Mx4rvWNkm5wpEbGdrcN5Y29ycA") AnnotationAssertion( "TAO:0001159") AnnotationAssertion(Annotation( "ncithesaurus:Immune_System") "UMLS:C0020962") AnnotationAssertion( "VHOG:0001247") AnnotationAssertion( "XAO:0003152") AnnotationAssertion( "ZFA:0001159") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002405") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "immune system") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses( ) DisjointClasses( ) DisjointClasses( ) # Class: (pericardial sac) AnnotationAssertion(Annotation( ) Annotation( ) "A double-walled sac containing the heart and the roots of the great vessels.") AnnotationAssertion( ) AnnotationAssertion( "FMA:9868") AnnotationAssertion( "RETIRED_EHDAA2:0001443") AnnotationAssertion( "TAO:0000054") AnnotationAssertion( "uberon") AnnotationAssertion( "pericardium") AnnotationAssertion( "UBERON:0002406") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "pericardial sac") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/7/7e/Gray489.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (pericardium) AnnotationAssertion(Annotation( ) Annotation( ) "The combination of pericardial sac (a double-walled sac containing the heart and the roots of the great vessels) plus fibrous pericardium.") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0010817") Annotation( "AAO"^^xsd:string) Annotation( "AAO:JMG") "Peritoneum that surrounds the heart.[AAO]") AnnotationAssertion( "pericardial") AnnotationAssertion(Annotation( "FMA"^^xsd:string) "In GO the concept of pericardium is developmental implicitly epithelial, but here it represents a multi-tissue structure encompassing the sac (epithelium plus connective) and cavity") AnnotationAssertion(Annotation( "ZFA"^^xsd:string) "this class denotes a combination of fibrous PC + PC sac (itself a combination of cavity, epithelium and connective tissue). Many sources use the term 'pericardium' to denote either just the serous membrane (ZFA) or the epithelium (GO)") AnnotationAssertion(Annotation( "FMA"^^xsd:string) "we follow FMA in dividing pericardium into pericardial sac and fibrous pericardium") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010817") AnnotationAssertion( "BSA:0000090") AnnotationAssertion( "BTO:0000717") AnnotationAssertion( "CALOHA:TS-0761") AnnotationAssertion( "EFO:0000820") AnnotationAssertion( "EHDAA:5376") AnnotationAssertion( "EMAPA:16133") AnnotationAssertion( "EV:0100023") AnnotationAssertion( "FMA:9869") AnnotationAssertion( "GAID:569") AnnotationAssertion( "MA:0000099") AnnotationAssertion( "MAT:0000454") AnnotationAssertion( "MESH:D010496") AnnotationAssertion( "NCIT:C13005") AnnotationAssertion( "OpenCyc:Mx4rvoCLgJwpEbGdrcN5Y29ycA") AnnotationAssertion( "RETIRED_EHDAA2:0001443") AnnotationAssertion( "TAO:0000054") AnnotationAssertion(Annotation( "ncithesaurus:Pericardium") "UMLS:C0031050") AnnotationAssertion( "VHOG:0001280") AnnotationAssertion( "XAO:0004182") AnnotationAssertion( "ZFA:0000054") AnnotationAssertion( "galen:Pericardium") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002407") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "pericardium") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/7/7e/Gray489.png"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "MA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (parietal serous pericardium) AnnotationAssertion(Annotation( ) "Parietal serous membrane which is part of the pericardium and forms the outer layer of the pericardial sac.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EHDAA:3422") AnnotationAssertion( "EHDAA:5378") AnnotationAssertion( "EMAPA:19031") AnnotationAssertion( "FMA:9870") AnnotationAssertion( "MA:0000483") AnnotationAssertion( "NCIT:C94500") AnnotationAssertion(Annotation( "ncithesaurus:Parietal_Pericardium") "UMLS:C0225969") AnnotationAssertion( "VHOG:0000537") AnnotationAssertion( "lamina parietalis (pericardii serosum)") AnnotationAssertion(Annotation( "FMA:9870") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "lamina parietalis pericardii") AnnotationAssertion( "parietal layer of serous pericardium") AnnotationAssertion(Annotation( "VHOG:0000537") "parietal pericardium") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "pericardial sac") AnnotationAssertion( "UBERON:0002408") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "parietal serous pericardium") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/7/7e/Gray489.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pericardial fluid) AnnotationAssertion(Annotation( ) Annotation( "FMA:9887") "Transudate contained in the pericardial cavity.[FMA].") AnnotationAssertion( ) AnnotationAssertion( "BTO:0001016") AnnotationAssertion( "FMA:9887") AnnotationAssertion( "MA:0002530") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002409") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "pericardial fluid") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (autonomic nervous system) AnnotationAssertion(Annotation( "GO:0048483") "The autonomic nervous system is composed of neurons that are not under conscious control, and is comprised of two antagonistic components, the sympathetic and parasympathetic nervous systems. The autonomic nervous system regulates key functions including the activity of the cardiac (heart) muscle, smooth muscles (e.g. of the gut), and glands[GO].") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000396") Annotation( "VHOG"^^xsd:string) Annotation( ) "Nervous system including a portion of the central and peripheral systems and presiding over the control and coordination of the vegetative functions of the organism. It innervates smooth and cardiac muscles and glandular tissues and is responsible for many actions which are more or less automatic (e.g. secretion, vasoconstriction etc.). It consists of the sympathetic and parasympathetic nervous systems. [Dorian_AF, Elsevier's_encyclopaedic_dictionary_of_medicine, Part_B:_Anatomy_(1988)_Amsterdam_etc.:_Elsevier][VHOG]") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0000033") Annotation( "AAO"^^xsd:string) Annotation( "AAO:BJB"^^xsd:string) "Part of the peripheral nervous system which regulates involuntary functions of the body and consists of the sympathetic and parasympathetic system.[AAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000396") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "DOI:10.1002/1097-0185(20000615)261:3<111::AID-AR6>3.0.CO;2-F Butler AB, Chordate evolution and the origin of craniates: An old brain in a new head. AnaT Rec (New Anat) (2000)") "From comparative analyses of craniate brains, a morphotype of the brain in the earliest craniate stock can be constructed. In marked contrast to cephalochordates, the ancestral craniate morphotype had a plethora of unique features, which included a telencephalon with pallial and subpallial parts, paired olfactory bulbs with substantial projections to most or all of the telencephalic pallium, paired lateral eyes and ears, a lateral line system for both electroreception and mechanoreception, spinal cord dorsal root ganglia, and an autonomic nervous system.[well established][VHOG]") AnnotationAssertion(Annotation( "FMA"^^xsd:string) "FMA splits this into peripheral and nervous parts; GO has ANS directly under NS; PNS is a sib") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0000033") AnnotationAssertion( "BIRNLEX:1123") AnnotationAssertion( "BTO:0002507") AnnotationAssertion( "CALOHA:TS-2001") AnnotationAssertion( "EHDA:10095") AnnotationAssertion( "EHDAA2:0000158") AnnotationAssertion( "EHDAA:3767") AnnotationAssertion( "EMAPA:16984") AnnotationAssertion( "FMA:65553") AnnotationAssertion( "GAID:706") AnnotationAssertion( "MA:0000219") AnnotationAssertion( "MESH:D001341") AnnotationAssertion( "NCIT:C12673") AnnotationAssertion( "TAO:0001574") AnnotationAssertion(Annotation( "BIRNLEX:1123") "UMLS:C0004388") AnnotationAssertion(Annotation( "ncithesaurus:Autonomic_Nervous_System") "UMLS:C0004388") AnnotationAssertion(Annotation( "BIRNLEX:1123") "UMLS:C1305381") AnnotationAssertion( "VHOG:0000396") AnnotationAssertion( "ZFA:0001574") AnnotationAssertion(Annotation( "FMA:65553") "autonomic division of peripheral nervous system") AnnotationAssertion(Annotation( "FMA:65553") "autonomic part of peripheral nervous system") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) "divisio autonomica systematis nervosi peripherici") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) "pars autonomica systematis nervosi peripherici") AnnotationAssertion(Annotation( "FMA:65553") "peripheral autonomic nervous system") AnnotationAssertion( "visceral nervous system") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "ANS") AnnotationAssertion(Annotation( ) Annotation( ) "divisio autonomica systematis nervosi peripherici") AnnotationAssertion( "UBERON:0002410") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "autonomic nervous system") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/f/f7/Gray839.png"^^xsd:anyURI) SubClassOf(Annotation( "cjm"^^xsd:string) ) SubClassOf(Annotation( "EMAPA"^^xsd:string) Annotation( "MA"^^xsd:string) Annotation( "NIFSTD"^^xsd:string) Annotation( "ZFA-modified-from-isa") ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (clitoris) AnnotationAssertion(Annotation( "ISBN:0-683-40008-8"^^xsd:string) Annotation( "MP:0003127") "The small, erectile body located at the anterior end of the vulva.") AnnotationAssertion( "clitoral") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0002020") AnnotationAssertion( "EHDAA2:0000255") AnnotationAssertion( "EHDAA:9360") AnnotationAssertion( "EMAPA:30819") AnnotationAssertion( "FMA:9909") AnnotationAssertion( "GAID:385") AnnotationAssertion( "MA:0000382") AnnotationAssertion( "MESH:D002987") AnnotationAssertion( "NCIT:C12308") AnnotationAssertion( "OpenCyc:Mx4rvVjr6ZwpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Clitoris") "UMLS:C0008984") AnnotationAssertion( "VHOG:0000700") AnnotationAssertion( "galen:Clitoris") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002411") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "clitoris") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/c/cf/Clitoris_anatomy_labeled-en.svg"^^xsd:anyURI) SubClassOf(Annotation( "Wikipedia"^^xsd:string) ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "MA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) Annotation( "Wikipedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (vertebra) AnnotationAssertion(Annotation( ) Annotation( ) Annotation( "GO_REF:0000034"^^xsd:string) Annotation( "VSAO:0000184") "The ossified form of a vertebral element, a skeletal element that forms around the notochord and is part of the vertebral column.") AnnotationAssertion( "Consider changing name to make distinction from inferred superclass 'vertebral element' clear") AnnotationAssertion( "we follow FMA in making this an irregular bone - however vertebra have 'epiphyses' which are currently classified as belonging to long bones") AnnotationAssertion(Annotation( "Wikipedia"^^xsd:string) ) AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0001189") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "Endochondral bone that forms around the notochord and is part of the vertebral column.[TAO]") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0000691") Annotation( "AAO"^^xsd:string) Annotation( "AAO:Pugener_and_Maglia_2008") "Main component of the vertebral column. It consists of two essential parts, a dorsal neural arch and a ventral centrum.[AAO]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0000691") AnnotationAssertion( "CALOHA:TS-2352") AnnotationAssertion( "EFO:0001371") AnnotationAssertion( "EMAPA:32740") AnnotationAssertion( "FMA:9914") AnnotationAssertion( "MA:0000309") AnnotationAssertion( "NCIT:C12933") AnnotationAssertion( "OpenCyc:Mx4rvt2Dh5wpEbGdrcN5Y29ycA") AnnotationAssertion( "TAO:0001189") AnnotationAssertion(Annotation( "ncithesaurus:Vertebra") "UMLS:C0549207") AnnotationAssertion( "XAO:0004019") AnnotationAssertion( "ZFA:0001189") AnnotationAssertion( "galen:Vertebra") AnnotationAssertion( "vertebra bone") AnnotationAssertion(Annotation( "PHENOSCAPE:ad"^^xsd:string) Annotation( ) "vertebrae") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002412") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "vertebra") SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (cervical vertebra) AnnotationAssertion(Annotation( ) "A vertebra that is located in the cervical region of the vertebral column.") AnnotationAssertion( "In some species, some parts of the skull may be composed of vertebra-like elements, e.g. the occipital bone in humans is composed of four vertebra-like segments. In many vertebrate species, cervical vertebrae are variable in number; however, almost all mammals have seven (including those with very short necks relative to body size, such as elephants or whales, and those with very long necks, such as giraffes). The few exceptions include the manatee and the sloths, of which the two-toed sloth has six cervical vertebrae and the three-toed sloth has up to nine cervical vertebrae. In many species, though not in mammals, the cervical vertebrae bear ribs. In many other groups, such as lizards and saurischian dinosaurs, the cervical ribs are large; in birds they are small and completely fused to the vertebrae. The transverse processes of mammals are homologous to the cervical ribs of other amniotes. Thoracic vertebrae in all species are defined as those vertebrae which also carry a pair of ribs, and lie caudal to the cervical vertebrae. In humans, cervical vertebrae are the smallest of the true vertebrae, and can be readily distinguished from those of the thoracic or lumbar regions by the presence of a foramen (hole) in each transverse process, through which passes the vertebral artery.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:17674") AnnotationAssertion( "FMA:9915") AnnotationAssertion( "GAID:235") AnnotationAssertion( "MA:0000311") AnnotationAssertion( "MESH:D002574") AnnotationAssertion( "NCIT:C12693") AnnotationAssertion( "XAO:0003076") AnnotationAssertion( "galen:CervicalVertebra") AnnotationAssertion(Annotation( ) "cervical vertebrae") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "vertebrae cervicales") AnnotationAssertion( "UBERON:0002413") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "cervical vertebra") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/f/f8/Illu_vertebral_column.jpg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "true"^^xsd:string) ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lumbar vertebra) AnnotationAssertion(Annotation( ) "Large vertebra of the movable part of the vertebral column, characterized by the absence of the foramen transversarium within the transverse process, and by the absence of facets on the sides of the body.") AnnotationAssertion(Annotation( "PMCID:PMC2700063") "Whereas all rats had six lumbar vertebrae, variable patterns in mice included mostly five vertebrae in DBA/2J, mostly six vertebrae in C57BL/6J, and a mix in B6129PF2/J") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "CALOHA:TS-2364") AnnotationAssertion( "EMAPA:18007") AnnotationAssertion( "FMA:9921") AnnotationAssertion( "GAID:240") AnnotationAssertion( "MA:0000312") AnnotationAssertion( "MESH:D008159") AnnotationAssertion( "NCIT:C12744") AnnotationAssertion( "OpenCyc:Mx4rvaOek5wpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Lumbar_Vertebra") "UMLS:C0024091") AnnotationAssertion( "galen:LumbarVertebra") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002414") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "lumbar vertebra") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/c/c8/Gray93.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (integumental system) AnnotationAssertion(Annotation( ) Annotation( ) Annotation( "CARO:0002001") "Connected anatomical system that forms a barrier between an animal and its environment. In vertebrates, the integumental system consists of the epidermis, dermis plus associated glands and adnexa such as hair and scales. In invertebrates, the integumental system may include cuticle.") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000403") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "DOI:10.1111/j.1469-7580.2008.01043.x Vickaryous MK, Sire JY, The integumentary skeleton of tetrapods: origin, evolution, and development. J Anat (2009)") "(...) the integument of many tetrapods is reinforced by a morphologically and structurally diverse assemblage of skeletal elements. These elements are widely understood to be derivatives of the once all-encompassing dermal skeleton of stem-gnathostomes (...).[well established][VHOG]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "UBERON:0007029") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AEO:0000154") AnnotationAssertion( "BILA:0000118") AnnotationAssertion( "CALOHA:TS-1299") AnnotationAssertion( "CARO:0002001") AnnotationAssertion( "EFO:0000807") AnnotationAssertion( "EHDAA2:0000836") AnnotationAssertion( "EHDAA2_RETIRED:0003154") AnnotationAssertion( "EHDAA:6520") AnnotationAssertion( "EMAPA:17524") AnnotationAssertion( "EV:0100151") AnnotationAssertion( "FBbt:00004969") AnnotationAssertion( "FMA:72979") AnnotationAssertion( "HAO:0000421") AnnotationAssertion( "MA:0000014") AnnotationAssertion( "MAT:0000033") AnnotationAssertion( "MESH:D034582") AnnotationAssertion( "MIAA:0000033") AnnotationAssertion( "NCIT:C12907") AnnotationAssertion( "TADS:0000108") AnnotationAssertion(Annotation( "ncithesaurus:Integumentary_System") "UMLS:C0037267") AnnotationAssertion( "VHOG:0000403") AnnotationAssertion( "XAO:0000176") AnnotationAssertion( "galen:Surface") AnnotationAssertion(Annotation( "FMA:72979") "integumentary system") AnnotationAssertion( "uberon") AnnotationAssertion( "body surface") AnnotationAssertion(Annotation( "MIAA:0000033") "dermal system") AnnotationAssertion( "external covering of organism") AnnotationAssertion(Annotation( ) Annotation( ) "integumentum commune") AnnotationAssertion(Annotation( "EHDAA2:0003154") "organism surface") AnnotationAssertion(Annotation( "BILA:0000118") "surface") AnnotationAssertion( "UBERON:0002416") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "integumental system") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses( ) DisjointClasses( ) # Class: (abdominal segment of trunk) AnnotationAssertion(Annotation( ) "The abdominal segment of the torso.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:35104") AnnotationAssertion( "FMA:259211") AnnotationAssertion( "MA:0000021") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "MA:0000021") "abdomen/pelvis/perineum") AnnotationAssertion(Annotation( "MA:0000021") "lower body") AnnotationAssertion(Annotation( "FMA:259211") "lower trunk") AnnotationAssertion(Annotation( ) "lumbar region") AnnotationAssertion( "UBERON:0002417") AnnotationAssertion(rdfs:label "abdominal segment of trunk") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ) # Class: (cartilage tissue) AnnotationAssertion(Annotation( ) Annotation( ) Annotation( ) Annotation( "GO_REF:0000034"^^xsd:string) Annotation( "PSPUB:0000170"^^xsd:string) Annotation( "VSAO:0000040") "Skeletal tissue that is avascular, rich in glycosaminoglycans (GAGs) and typically includes chondrocytes within isolated lacunae. Cartilage tissue is deposited by chondroblasts.") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0000060") Annotation( "AAO"^^xsd:string) Annotation( "AAO:LAP"^^xsd:string) "A type of dense connective tissue. It is composed of cells called chondrocytes which are dispersed in a firm gel-like ground substance, called the matrix. Cartilage is avascular (contains no blood vessels) and nutrients are diffused through the matrix. Cartilage is found in the joints, the rib cage, the ear, the nose, in the throat and between intervertebral disks. It makes up virtually the entire skeleton in chondrichthyes.[AAO]") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0001501") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "Portion of tissue which is connective tissue composed of collagen and/or elastin fibers and chondrocytes. Cartilage is avascular and provides both skeletal functions and a framework upon which bone is deposited.[TAO]") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "VSAO:0000040") Annotation( "VSAO"^^xsd:string) Annotation( "GO_REF:0000034, http://dx.plos.org/10.1371/journal.pone.0051070") Annotation( "PSPUB:0000170"^^xsd:string) "Skeletal tissue that is avascular, rich in glycosaminoglycans (GAGs) and typically includes chondrocytes within isolated lacunae. Cartilage tissue is deposited by chondroblasts.[VSAO]") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0000060") Annotation( "AAO"^^xsd:string) "relationship loss: subclass specialized connective tissue (AAO:0000571)[AAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001207") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "DOI:10.1111/j.1525-142X.2011.00520.x Hall BK, Parallelism, deep homology, and evo-devo. Evolution and Development (2012)") "Phylogenetic analysis suggests that cartilage arose independently in cnidarians, hemichordates, vertebrates, arthropods, annelids, brachiopods, and molluscs - or a common ancestor of brachiopods and molluscs (...). Analyses of cartilage as a tissue and of the development of invertebrate cartilages are consistent with homology between invertebrate and vertebrate cartilage. From the discussion above, it will be clear that understanding genetic changes underlying cartilage evolution is key to determining whether the multiple origins of cartilage represent parallel evolution.[well established][VHOG]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0000060") AnnotationAssertion( "AEO:0000087") AnnotationAssertion( "BTO:0000206") AnnotationAssertion( "EFO:0000949") AnnotationAssertion( "EHDAA2:0003087") AnnotationAssertion( "EMAPA:32730") AnnotationAssertion( "EV:0100141") AnnotationAssertion( "FMA:37377") AnnotationAssertion( "GAID:99") AnnotationAssertion( "MA:0000104") AnnotationAssertion( "MAT:0000189") AnnotationAssertion( "MESH:D002356") AnnotationAssertion( "MIAA:0000189") AnnotationAssertion( "NCIT:C12373") AnnotationAssertion( "NCIT:C32268") AnnotationAssertion( "OpenCyc:Mx4rvVjeOZwpEbGdrcN5Y29ycA") AnnotationAssertion( "TAO:0001501") AnnotationAssertion(Annotation( "ncithesaurus:Cartilage") "UMLS:C0007301") AnnotationAssertion( "VHOG:0001207") AnnotationAssertion( "VSAO:0000040") AnnotationAssertion( "XAO:0000170") AnnotationAssertion( "ZFA:0005622") AnnotationAssertion( "galen:Cartilage") AnnotationAssertion(Annotation( "FMA:37377") "cartilage tissue") AnnotationAssertion( "cartilaginous tissue") AnnotationAssertion(Annotation( "VSAO:0000040") "chondrogenic tissue") AnnotationAssertion( "uberon") AnnotationAssertion( "cartilage") AnnotationAssertion(Annotation( "VHOG:0001207") "cartilages") AnnotationAssertion(Annotation( "FMA:37377") "portion of cartilage tissue") AnnotationAssertion( "UBERON:0002418") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "Previous: \"A portion of connective tissue dominated by extracellular matrix containing collagen type II and large amounts of proteoglycan, particularly chondroitin sulfate[GO]. Regular connective tissue, which consists of chondrocytes and related cells, the intercellular matrix of which is chondrified. Examples: hyaline cartilage, fibrocartilage, elastic cartilage[FMA]. an avascular supporting and articular skeletal tissue. It also functions as the primary endoskeletal support in vertebrate embryos. Cartilage is deposited by and is composed of chondroblasts and chondrocytes separated by an extracellular matrix, which may or may not mineralize depending on cartilage type, age, or taxon[Hall and Witten].\" See also FMA:71500 Set of cartilages, FMA:55107 Cartilage organ, FMA:12264 Articular cartilage. // elements made from cartilage, cartilage-like, or chondroid tissues evolved in invertebrates[H&W]") AnnotationAssertion(rdfs:label "cartilage tissue") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/e/ee/Hypertrophic_Zone_of_Epiphyseal_Plate.jpg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses( ) # Class: (skin gland) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A gland that is part of a skin of body [Automatically generated definition].") AnnotationAssertion( "check FMA, use plural for now as general class not there") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:35774") AnnotationAssertion( "FMA:71878") AnnotationAssertion( "MA:0000146") AnnotationAssertion(Annotation( "FMA:71878") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "glandulae cutis") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:71878") "set of skin glands") AnnotationAssertion(Annotation( ) "skin glands") AnnotationAssertion(Annotation( ) "skin glands set") AnnotationAssertion( "UBERON:0002419") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "skin gland") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (basal ganglion) AnnotationAssertion(Annotation( "BIRNLEX:826") "An individual member of a collection of basal ganglia. Basal ganglia are subcortical masses of gray matter in the forebrain and midbrain that are richly interconnected and so viewed as a functional system. The nuclei usually included are the caudate nucleus (caudoputamen in rodents), putamen, globus pallidus, substantia nigra (pars compacta and pars reticulata) and the subthalamic nucleus. Some also include the nucleus accumbens and ventral pallidum[NIF,modified].") AnnotationAssertion( "it is necessary to introduce two classes, one representing an individual basal ganglion, another representing the aggregate structure, in order to have consistent classification amongst AOs (e.g. in MA the aygdala is part of the BG, in FMA and BTO it is a subclass). Apart from achieving this consistency, the value of having two distinct classes is questionable, since the BG-plural is trivially the set of all BGs-singular. it would be better for all AOs to decide on one single way of doing this. Do not merge until this is done.") AnnotationAssertion( ) AnnotationAssertion( "BTO:0000235") AnnotationAssertion( "CALOHA:TS-1149") AnnotationAssertion( "DHBA:10332") AnnotationAssertion( "EFO:0000904") AnnotationAssertion( "FMA:62514") AnnotationAssertion( "basal ganglion of telencephalon") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "basal ganglia") AnnotationAssertion(Annotation( "MA:0000184") "basal nucleus") AnnotationAssertion(Annotation( ) Annotation( ) "nuclei basales") AnnotationAssertion( "UBERON:0002420") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "basal ganglion") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/1/1b/Basal_Ganglia_and_Related_Structures.svg"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (hippocampal formation) AnnotationAssertion(Annotation( ) "Hippocampus (proper) plus dentate gyrus and subiculum[definition derived from NIF comments and ontology alignment].") AnnotationAssertion(Annotation( "NIF"^^xsd:string) "The term hippocampus is often used synonymously with hippocampal formation which consists of the hippocampus proper or Cornu Ammonis, the dentate gyrus and the subiculum") AnnotationAssertion(Annotation( "BTO"^^xsd:string) "BTO:0000601 is placed here since it includes the DG. GO also includes dentate gyrus development as part of hippocampus development, so we assume when GO says 'hippocampus' it means 'hippocampal formation'. In ABA HPF = (.. subiculum) + HIP, HIP = DG + AH.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:HPF") AnnotationAssertion( "BAMS:Hi") AnnotationAssertion( "BAMS:HiF") AnnotationAssertion( "BIRNLEX:715") AnnotationAssertion( "BM:Tel-HF") AnnotationAssertion( "BTO:0000601") AnnotationAssertion( "DHBA:10294") AnnotationAssertion( "EMAPA:35405") AnnotationAssertion( "FMA:74038") AnnotationAssertion( "HBA:4249") AnnotationAssertion( "MA:0000189") AnnotationAssertion( "MBA:1089") AnnotationAssertion( "PBA:4003") AnnotationAssertion(Annotation( "BIRNLEX:715") "UMLS:C0175202") AnnotationAssertion(Annotation( "BIRNLEX:715") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=177") AnnotationAssertion( "hippocampus (Crosby)") AnnotationAssertion(Annotation( "BTO:0000601") Annotation( "GO:0021766") Annotation( ) "hippocampus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "MA:0000189") "archipallium") AnnotationAssertion(Annotation( "NeuroNames:177") Annotation( ) "formatio hippocampi") AnnotationAssertion(Annotation( "BTO:0000601") "major hippocampus") AnnotationAssertion(Annotation( "MA:0000189") "primal cortex") AnnotationAssertion(Annotation( "NeuroNames:177") "seahorse") AnnotationAssertion( "UBERON:0002421") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "hippocampal formation") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "MBA-indirect") Annotation( "NIFSTD"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (fourth ventricle) AnnotationAssertion(Annotation( "BIRNLEX:1256") "Part of the ventricular system of the brain, forming a single large irregularly shaped cavity located on the midline of the rhombencephalon, between the medulla, pons and the isthmus ventrally and the cerebellum dorsally. It is continuous with the cerebral aqueduct anteriorally and the central canal of the spinal cord posteriorly. It communicates with the subarachnoid space through its lateral and median apertures.") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0000110") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "Fluid-filled brain cavity. Kimmel et al, 1995.[TAO]") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0011043") Annotation( "AAO"^^xsd:string) Annotation( "UBERON:0002422") "Irregularly shaped cavity in the rhombencephalon, between the medulla oblongata, the pons, and the isthmus in front, and the cerebellum behind. It is continuous with the central canal of the cord below and with the cerebral aqueduct above, and through its lateral and median apertures it communicates with the subarachnoid space.[AAO]") AnnotationAssertion(Annotation( "GO:0021592") "The fourth ventricle is an irregularly shaped cavity in the rhombencephalon, between the medulla oblongata, the pons, and the isthmus in front, and the cerebellum behind. It is continuous with the central canal of the cord below and with the cerebral aqueduct above, and through its lateral and median apertures it communicates with the subarachnoid space[GO][GO:0021592].") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000006") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0878932504 Gilbert SF, Developmental Biology (2006) p.381-382, ISBN:978-0030223693 Liem KF, Bemis WE, Walker WF, Grande L, Functional Anatomy of the Vertebrates: An Evolutionary Perspective (2001) p.500") "The early development of most vertebrate brains is similar (...). The zebrafish neural tube follows the same basic differentiation pattern as the mammalian neural tube (reference 1); The brain develops from three embryonic enlargements of the neural tube, which later differentiate into five regions. A forebrain differentiates into telencephalon and diencephalon. The midbrain, or mesencephalon, remains undivided. The hindbrain divides into the metencephalon and myelencephalon. Cavities within the brain enlarge to form a series of interconnected ventricles (reference 2).[well established][VHOG]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0011043") AnnotationAssertion( "BAMS:4V") AnnotationAssertion( "BAMS:V4") AnnotationAssertion( "BIRNLEX:1256") AnnotationAssertion( "BM:Pons-4V") AnnotationAssertion( "BTO:0003426") AnnotationAssertion( "CALOHA:TS-2015") AnnotationAssertion( "DHBA:10669") AnnotationAssertion( "DHBA:12805") AnnotationAssertion( "DMBA:126651782") AnnotationAssertion( "EHDAA2:0000100") AnnotationAssertion( "EHDAA:896") AnnotationAssertion( "EMAPA:16917") AnnotationAssertion( "EV:0100310") AnnotationAssertion( "FMA:78469") AnnotationAssertion( "GAID:610") AnnotationAssertion( "HBA:9421") AnnotationAssertion( "MA:0000196") AnnotationAssertion( "MBA:145") AnnotationAssertion( "MESH:D020546") AnnotationAssertion( "NCIT:C12828") AnnotationAssertion( "OpenCyc:Mx4rv-7Q6pwpEbGdrcN5Y29ycA") AnnotationAssertion( "TAO:0000110") AnnotationAssertion(Annotation( "ncithesaurus:Fourth_Ventricle_of_the_Brain") "UMLS:C0149556") AnnotationAssertion( "VHOG:0000006") AnnotationAssertion( "XAO:0003099") AnnotationAssertion( "ZFA:0000110") AnnotationAssertion(Annotation( "ZFA:0000110") "ventricle IV") AnnotationAssertion(Annotation( "ZFA:0000110") "rhombencephalic vesicle") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "MA:0000196") "4th ventricle") AnnotationAssertion(Annotation( "VHOG:0000006") "IVth ventricle") AnnotationAssertion(Annotation( "BAMS:V4") "fourth ventricle proper") AnnotationAssertion(Annotation( "VHOG:0000006") Annotation( ) "hindbrain ventricle") AnnotationAssertion(Annotation( "VHOG:0000006") "rhombencephalic ventricle") AnnotationAssertion(Annotation( "BTO:0003426") Annotation( ) "ventricle of hindbrain") AnnotationAssertion(Annotation( "BTO:0003426") "ventricle of rhombencephalon") AnnotationAssertion(Annotation( ) Annotation( ) "ventriculus quartus") AnnotationAssertion( "UBERON:0002422") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "fourth ventricle") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/7/7d/Gray734.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (hepatobiliary system) AnnotationAssertion(Annotation( ) "The part of the digestive system that contains the liver and the biliary system.") AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "System responsible for the production and movement of bile[ZFIN:curator].") AnnotationAssertion( "The hepaticobiliary system is responsible for metabolic and catabolic processing of small molecules absorbed from the blood or gut, hormones and serum proteins, detoxification, storage of glycogen, triglycerides, metals and lipid soluble vitamins and excretion of bile. Included are the synthesis of albumin, blood coagulation factors, complement, and specific binding proteins. The parts are: liver, bile duct, gall bladder and hepatic duct [GO:0061008]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0011056") AnnotationAssertion( "CALOHA:TS-1308") AnnotationAssertion( "EFO:0000800") AnnotationAssertion( "EHDAA2:0000998") AnnotationAssertion( "EHDAA:2189") AnnotationAssertion( "EMAPA:16840") AnnotationAssertion( "EV:0100088") AnnotationAssertion( "MA:0000324") AnnotationAssertion( "MAT:0000024") AnnotationAssertion( "MIAA:0000024") AnnotationAssertion( "NCIT:C43612") AnnotationAssertion( "TAO:0000036") AnnotationAssertion(Annotation( "ncithesaurus:Hepatobiliary_System") "UMLS:C1711359") AnnotationAssertion( "VHOG:0000294") AnnotationAssertion( "XAO:0000132") AnnotationAssertion( "ZFA:0000036") AnnotationAssertion(Annotation( "GO:0061008") "hepaticobiliary system") AnnotationAssertion( "liver and biliary system") AnnotationAssertion( "uberon") AnnotationAssertion( "liver/biliary system") AnnotationAssertion( "UBERON:0002423") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "hepatobiliary system") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses( ) # Class: (oral epithelium) AnnotationAssertion(Annotation( ) "An epithelium that is part of the mouth and lines the oral cavity, typically stratified squamous, and may be para-, ortho- or non- keratinized. Primary barrier between oral environment and deeper tissues.") AnnotationAssertion( "consider including separate class for developmental structure (adult human is stratified; in EHDAA2 is unilaminar)") AnnotationAssertion(Annotation( "ZFA:0000816") "The epithelium that lines the oral cavity. The oral epithelium epithelial cells with many short microvilli as well as mucous cells, rodlet cells and taste buds[ZFIN:ZDB-PUB-060921-12, ZFIN:ZDB-PUB-091204-24].") AnnotationAssertion(Annotation( ) "the avian oral epithelium has the developmental capacity to initiate tooth developmental programs with underlying grafts of non-avian oral ectomesenchyme") AnnotationAssertion( ) AnnotationAssertion( "AAO:0010357") AnnotationAssertion( "BTO:0001775") AnnotationAssertion( "CALOHA:TS-0715") AnnotationAssertion( "EHDAA2:0001325") AnnotationAssertion( "EHDAA:2187") AnnotationAssertion( "EMAPA:16839") AnnotationAssertion( "EMAPA:26942") AnnotationAssertion( "FMA:265152") AnnotationAssertion( "MA:0000344") AnnotationAssertion( "NCIT:C49595") AnnotationAssertion( "TAO:0000816") AnnotationAssertion(Annotation( "ncithesaurus:Oral_Cavity_Epithelium") "UMLS:C1709332") AnnotationAssertion( "VHOG:0000187") AnnotationAssertion( "XAO:0003201") AnnotationAssertion( "ZFA:0000816") AnnotationAssertion(Annotation( "FMA:265152") "epithelium of mucosa of mouth") AnnotationAssertion(Annotation( "FMA:265152") "epithelium of oral mucosa") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002424") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "oral epithelium") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "AAO-modified") ObjectSomeValuesFrom( )) # Class: (visceral serous pericardium) AnnotationAssertion(Annotation( ) "Visceral serous membrane which is continuous with the parietal serous pericardium and is attached to the myocardium[FMA].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:16589") AnnotationAssertion( "EMAPA:19032") AnnotationAssertion( "FMA:84882") AnnotationAssertion( "MA:0000484") AnnotationAssertion( "VHOG:0000538") AnnotationAssertion(Annotation( ) Annotation( ) "lamina visceralis pericardii serosi") AnnotationAssertion( "serous visceral pericardium") AnnotationAssertion( "visceral lamina of serous pericardium") AnnotationAssertion( "visceral layer of serous pericardium") AnnotationAssertion(Annotation( "VHOG:0000538") "visceral pericardium") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "MA:0000484") "epicardium") AnnotationAssertion(Annotation( "EMAPA:16589") "pericardium visceral mesothelium") AnnotationAssertion( "UBERON:0002425") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "visceral serous pericardium") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "cjm"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (chest muscle) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "Any muscle organ that is part of a chest [Automatically generated definition].") AnnotationAssertion( "BTO:0000508") AnnotationAssertion( "CALOHA:TS-1037") AnnotationAssertion( "EMAPA:17747") AnnotationAssertion( "EMAPA:17748") AnnotationAssertion( "FMA:9619") AnnotationAssertion( "MA:0000548") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "anterior thoracic region muscle organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "anterolateral part of thorax muscle organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "chest muscle organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "front of thorax muscle organ") AnnotationAssertion(Annotation( "FMA:9619") "muscle of thorax") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "muscle organ of anterior thoracic region") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "muscle organ of anterolateral part of thorax") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "muscle organ of chest") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "muscle organ of front of thorax") AnnotationAssertion( "musculus thoracicus") AnnotationAssertion( "thoracic muscle") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002426") AnnotationAssertion(rdfs:label "chest muscle") SubClassOf( ) SubClassOf( ) # Class: (arm skin) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A zone of skin that is part of an arm [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37350") AnnotationAssertion( "MA:0000596") AnnotationAssertion( "NCIT:C52754") AnnotationAssertion(Annotation( "ncithesaurus:Arm_Skin") "UMLS:C0222204") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "skin of arm") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "brachial region skin") AnnotationAssertion( "UBERON:0002427") AnnotationAssertion(rdfs:label "arm skin") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (limb bone) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A bone that is part of a limb [Automatically generated definition].") AnnotationAssertion( "the formal definition is very inclusive, and includes sesamoids") AnnotationAssertion(Annotation( "NCIT") "NCITA includes clavicle. MA:'limb bone' is actually a bone of limb or girdle") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EFO:0000945") AnnotationAssertion( "MAT:0000151") AnnotationAssertion( "MIAA:0000151") AnnotationAssertion( "NCIT:C32223") AnnotationAssertion(Annotation( "ncithesaurus:Bone_of_the_Extremity") "UMLS:C0582791") AnnotationAssertion( "bone of extremity") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bone of limb") AnnotationAssertion(Annotation( ) Annotation( "UBERONREF:0000003"^^xsd:string) "free limb bone") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002428") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "limb bone") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (cervical lymph node) AnnotationAssertion(Annotation( ) "Cervical lymph nodes are lymph nodes found in the neck. [WP,unvetted].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:61213") AnnotationAssertion( "MA:0000736") AnnotationAssertion( "NCIT:C32298") AnnotationAssertion(Annotation( "ncithesaurus:Cervical_Lymph_Node") "UMLS:C0588054") AnnotationAssertion( "lymph node of neck") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002429") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "cervical lymph node") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/4/4c/Lymph_node_regions.jpg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lateral hypothalamic area) AnnotationAssertion(Annotation( ) "The lateral hypothalamus or lateral hypothalamic area is a part of the hypothalamus. It is concerned with hunger. Damage to this area can cause reduced food intake. Stimulating the lateral hypothalamus causes a desire to eat, while stimulating the ventromedial hypothalamus causes a desire to stop eating. [WP,unvetted].") AnnotationAssertion(Annotation( "Ariens, p. 1192") ) AnnotationAssertion(Annotation( "BIRNLEX:4037") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "LH") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:HLA") AnnotationAssertion( "BAMS:LH") AnnotationAssertion( "BAMS:LHA") AnnotationAssertion( "BIRNLEX:4037") AnnotationAssertion( "BM:Die-Hy-HLA") AnnotationAssertion( "EMAPA:35480") AnnotationAssertion( "FMA:62030") AnnotationAssertion( "GAID:640") AnnotationAssertion( "MA:0000834") AnnotationAssertion( "MBA:194") AnnotationAssertion( "MESH:A08.186.211.730.385.357.300") AnnotationAssertion(Annotation( "BIRNLEX:4037") "UMLS:C0020654") AnnotationAssertion(Annotation( "BIRNLEX:4037") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=426") AnnotationAssertion(Annotation( "FMA:62030") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "area hypothalamica lateralis") AnnotationAssertion( "lateral division of hypothalamus") AnnotationAssertion( "lateral group of hypothalamic nuclei") AnnotationAssertion( "lateral hypothalamic group") AnnotationAssertion(Annotation( "FMA:62030") "lateral hypothalamic region") AnnotationAssertion( "lateral hypothalamic zone (Crosby)") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:426") Annotation( ) "area lateralis hypothalami") AnnotationAssertion(Annotation( "NeuroNames:426") "lateral hypothalamic area (Nissl 1913)") AnnotationAssertion(Annotation( "BAMS:LHA") "lateral hypothalamic area proper") AnnotationAssertion(Annotation( "MA:0000834") "lateral hypothalamic nucleus") AnnotationAssertion( "UBERON:0002430") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "lateral hypothalamic area") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/8/8c/HypothalamicNuclei.PNG"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete pars anterior) AnnotationAssertion( "UBERON:0006964") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002431") AnnotationAssertion(rdfs:label "obsolete pars anterior") AnnotationAssertion(rdfs:seeAlso "https://github.com/obophenotype/uberon/issues/436"^^xsd:anyURI) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (pars intermedia of adenohypophysis) AnnotationAssertion(Annotation( "MGI:csmith"^^xsd:string) Annotation( "MP:0008130") "The thin boundary between the adenohypophysis and neurohypophysis of the pituitary that produces melanocyte stimulating hormone (MSH); this area is small or absent in mammalian adults.") AnnotationAssertion(Annotation( "ISBN:0471888893"^^xsd:string) ) AnnotationAssertion(Annotation( "Ariens, p. 1192") ) AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001178") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0030223693 Liem KF, Bemis WE, Walker WF, Grande L, Functional Anatomy of the Vertebrates: An Evolutionary Perspective (2001) p.510 and Figure 15-5") "It (the hypophysis) develops embryonically in all vertebrates from two ectodermal evaginations that meet and unite. An infundibulum grows ventrally from the diencephalon of the brain, and Rathke's pouch extends dorsally from the roof of the developing mouth, or stomodaeum. The infundibulum remains connected to the floor of the diencephalon, which becomes the hypothalamus, and gives rise to the part of the gland known as the neurohypophysis. (...) Rathke's pouch loses its connection with the stomodaeum in most adult vertebrates and gives rise to the rest of the gland, the adenohypophysis. (...) A well-developed hypophyseal system with functional connections to the hypothalamus is unique to craniates.[well established][VHOG]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:IPit") AnnotationAssertion( "BTO:0001788") AnnotationAssertion( "CALOHA:TS-0795") AnnotationAssertion( "EHDAA2:0001417") AnnotationAssertion( "EHDAA:8765") AnnotationAssertion( "EMAPA:17516") AnnotationAssertion( "FMA:74632") AnnotationAssertion( "MA:0000855") AnnotationAssertion( "TAO:0001197") AnnotationAssertion( "VHOG:0001178") AnnotationAssertion( "ZFA:0001197") AnnotationAssertion( "intermediate lobe of adenohypophysis") AnnotationAssertion( "intermediate lobe of pituitary") AnnotationAssertion(Annotation( "MA:0000855") "pars intermedia") AnnotationAssertion(Annotation( "FMA:74632") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "pars intermedia (glandula pituitaria)") AnnotationAssertion(Annotation( "FMA:74632") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "pars intermedia adenohypophysis") AnnotationAssertion(Annotation( "FMA:74632") "pars intermedia of anterior lobe of pituitary gland") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0001788") "intermediate lobe") AnnotationAssertion(Annotation( ) Annotation( ) "pars intermedia adenohypophyseos") AnnotationAssertion(Annotation( "BTO:0001788") "pars intermedia adenohypophyseos") AnnotationAssertion(Annotation( "BTO:0001788") "pars intermedia lobi anterior hypophyseos") AnnotationAssertion( "UBERON:0002432") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "pars intermedia of adenohypophysis") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/f/fb/Gray1181.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) Annotation( "ZFA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pars tuberalis of adenohypophysis) AnnotationAssertion(Annotation( ) "The pars tuberalis is part of the anterior lobe of the pituitary gland, and wraps the pituitary stalk in a highly vascularized sheath. [WP,unvetted].") AnnotationAssertion(Annotation( "ZFA:0001196") ) AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001114") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0030223693 Liem KF, Bemis WE, Walker WF, Grande L, Functional Anatomy of the Vertebrates: An Evolutionary Perspective (2001) p.510 and Figure 15-5") "It (the hypophysis) develops embryonically in all vertebrates from two ectodermal evaginations that meet and unite. An infundibulum grows ventrally from the diencephalon of the brain, and Rathke's pouch extends dorsally from the roof of the developing mouth, or stomodaeum. The infundibulum remains connected to the floor of the diencephalon, which becomes the hypothalamus, and gives rise to the part of the gland known as the neurohypophysis. (...) Rathke's pouch loses its connection with the stomodaeum in most adult vertebrates and gives rise to the rest of the gland, the adenohypophysis. (...) A well-developed hypophyseal system with functional connections to the hypothalamus is unique to craniates.[well established][VHOG]") AnnotationAssertion( ) AnnotationAssertion( "BTO:0001739") AnnotationAssertion( "EHDAA2:0001419") AnnotationAssertion( "EHDAA:8767") AnnotationAssertion( "EMAPA:17517") AnnotationAssertion( "FMA:74631") AnnotationAssertion( "MA:0000856") AnnotationAssertion( "TAO:0001196") AnnotationAssertion( "VHOG:0001114") AnnotationAssertion(Annotation( "FMA:74631") "pars infundibularis of adenohypophysis") AnnotationAssertion(Annotation( "MA:0000856") "pars tuberalis") AnnotationAssertion(Annotation( "FMA:74631") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "pars tuberalis (glandula pituitaria)") AnnotationAssertion(Annotation( "FMA:74631") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "pars tuberalis adenohypophysis") AnnotationAssertion(Annotation( "FMA:74631") "pars tuberalis of anterior lobe of pituitary gland") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "pars tuberalis adenohypophyseos") AnnotationAssertion( "UBERON:0002433") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "pars tuberalis of adenohypophysis") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/b/b9/Pituitary_gland_representation.PNG"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pituitary stalk) AnnotationAssertion(Annotation( "ISBN:0-683-40008-8"^^xsd:string) Annotation( "MP:0009463") "The apical portion of the tubular structure extending from the hypothalamus to the posterior lobe of the pituitary gland.") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0001199") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "A short stalk connecting the pituitary with the brain. Axons of secretory cells in the floor of the diencephalon traverse the infundibulum and terminate in the neurohypophysis.[TAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000245") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0030223693 Liem KF, Bemis WE, Walker WF, Grande L, Functional Anatomy of the Vertebrates: An Evolutionary Perspective (2001) p.510 and Figure 15-5") "It (the hypophysis) develops embryonically in all vertebrates from two ectodermal evaginations that meet and unite. An infundibulum grows ventrally from the diencephalon of the brain, and Rathke's pouch extends dorsally from the roof of the developing mouth, or stomodaeum. The infundibulum remains connected to the floor of the diencephalon, which becomes the hypothalamus, and gives rise to the part of the gland known as the neurohypophysis. (...) Rathke's pouch loses its connection with the stomodaeum in most adult vertebrates and gives rise to the rest of the gland, the adenohypophysis. (...) A well-developed hypophyseal system with functional connections to the hypothalamus is unique to craniates.[well established][VHOG]") AnnotationAssertion( "UBERON:0003014") AnnotationAssertion( "UBERON:0014606") AnnotationAssertion(Annotation( "BIRNLEX:1248") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "InfS") AnnotationAssertion(Annotation( "BIRNLEX:912") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "THP") AnnotationAssertion(Annotation( "MP:0009463") "infundibular stem") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:INF") AnnotationAssertion( "BAMS:InfS") AnnotationAssertion( "BAMS:THP") AnnotationAssertion( "BIRNLEX:1248") AnnotationAssertion( "BIRNLEX:912") AnnotationAssertion( "BTO:0000768") AnnotationAssertion( "DHBA:10643") AnnotationAssertion( "DMBA:15690") AnnotationAssertion( "EHDAA2:0000828") AnnotationAssertion( "EHDAA:7538") AnnotationAssertion( "EMAPA:17520") AnnotationAssertion( "FMA:74635") AnnotationAssertion( "HBA:9358") AnnotationAssertion( "MA:0000858") AnnotationAssertion( "NCIT:C32228") AnnotationAssertion( "NCIT:C45912") AnnotationAssertion( "TAO:0001199") AnnotationAssertion(Annotation( "BIRNLEX:1248") "UMLS:C0175325") AnnotationAssertion(Annotation( "BIRNLEX:1248") "UMLS:C0447641") AnnotationAssertion(Annotation( "BIRNLEX:912") "UMLS:C0447641") AnnotationAssertion(Annotation( "ncithesaurus:Pituitary_Stalk") "UMLS:C0751440") AnnotationAssertion( "VHOG:0000245") AnnotationAssertion( "XAO:0004210") AnnotationAssertion( "ZFA:0001199") AnnotationAssertion(Annotation( "BIRNLEX:1248") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=405") AnnotationAssertion(Annotation( "BIRNLEX:912") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=408") AnnotationAssertion(Annotation( "MP:0009463") "hypophyseal stalk") AnnotationAssertion(Annotation( "BIRNLEX:1248") "infundibular stalk") AnnotationAssertion(Annotation( "BIRNLEX:1248") Annotation( ) "infundibular stem") AnnotationAssertion(Annotation( "BIRNLEX:1248") "infundibular stem of neurohypophysis") AnnotationAssertion(Annotation( "FMA:74635") "infundibular stem of neurohypophysis") AnnotationAssertion(Annotation( "MA:0000858") Annotation( "ZFA:0001199") "infundibulum") AnnotationAssertion(Annotation( "ZFA:0001199") "infundibulum") AnnotationAssertion(Annotation( "FMA:74635") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "infundibulum (lobus posterior) (glandula pituitaria)") AnnotationAssertion(Annotation( "FMA:74635") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "infundibulum hypophysis") AnnotationAssertion(Annotation( "FMA:74635") "infundibulum of neurohypophysis") AnnotationAssertion(Annotation( "FMA:74635") "infundibulum of pituitary gland") AnnotationAssertion(Annotation( "FMA:74635") "infundibulum of posterior lobe of pituitary gland") AnnotationAssertion(Annotation( "FMA:74635") "neurohypophysis infundibulum") AnnotationAssertion( "pituitary infundibular stalk") AnnotationAssertion(Annotation( "FMA:74635") "tuberal part of hypophysis") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BIRNLEX:1248") "hypophyseal infundibulum") AnnotationAssertion(Annotation( "ZFA:0001199") "hypophysial stalk") AnnotationAssertion(Annotation( ) Annotation( ) "infundibulum neurohypophyseos") AnnotationAssertion(Annotation( "ZFA:0001199") "infundibulum of hypothalamus") AnnotationAssertion(Annotation( "BIRNLEX:1248") "infundibulum of posterior lobe of pituitary gland") AnnotationAssertion(Annotation( "NeuroNames:408") Annotation( ) "pars tuberalis (hypophysis)") AnnotationAssertion(Annotation( "NeuroNames:408") "tuberal part of the hypophysis") AnnotationAssertion( "UBERON:0002434") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "pituitary stalk") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/b/b9/Pituitary_gland_representation.PNG"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "NIFSTD") Annotation( "FMA"^^xsd:string) Annotation( "MA"^^xsd:string) Annotation( "ZFA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "NIFSTD"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses( ) # Class: (striatum) AnnotationAssertion(Annotation( ) Annotation( "GOC:jl") "A region of the forebrain consisting of the caudate nucleus, putamen and fundus striati.[GO].") AnnotationAssertion( "striatal") AnnotationAssertion(Annotation( "FMA"^^xsd:string) "FMA divides 'striatum of neuraxis' into 4, neostriatum is seperate class. In NIF these are synonyms. TODO - check striatum vs corpus striatum see Wikipedia:Striatum#History. Check caudoputamen") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:STR") AnnotationAssertion( "BAMS:Str") AnnotationAssertion( "BAMS:Striatum") AnnotationAssertion( "BIRNLEX:1672") AnnotationAssertion( "BM:N") AnnotationAssertion( "BTO:0000418") AnnotationAssertion( "DHBA:10333") AnnotationAssertion( "DMBA:15851") AnnotationAssertion( "EFO:0000109") AnnotationAssertion( "EMAPA:17549") AnnotationAssertion( "FMA:77618") AnnotationAssertion( "FMA:83683") AnnotationAssertion( "HBA:4277") AnnotationAssertion( "MA:0000891") AnnotationAssertion( "MBA:477") AnnotationAssertion( "MESH:A08.186.211.730.885.105.487.550") AnnotationAssertion( "NCIT:C111122") AnnotationAssertion( "PBA:10080") AnnotationAssertion(Annotation( "BIRNLEX:1672") "UMLS:C0162512") AnnotationAssertion(Annotation( "BIRNLEX:1672") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=225") AnnotationAssertion( "ncithesaurus:Striatum") AnnotationAssertion(Annotation( ) Annotation( "GO:0021756") "neostriatum") AnnotationAssertion(Annotation( "BIRNLEX:1672") "neostriatum") AnnotationAssertion(Annotation( "FMA:83683") "neuraxis striatum") AnnotationAssertion(Annotation( ) Annotation( "GO:0021756") "striate nucleus") AnnotationAssertion(Annotation( "BIRNLEX:1672") "striatum") AnnotationAssertion(Annotation( "FMA:83683") "striatum of neuraxis") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BIRNLEX:1672") "caudate putamen") AnnotationAssertion(Annotation( "MA:0000891") "corpus striatum") AnnotationAssertion(Annotation( "NeuroNames:225") Annotation( ) "corpus striatum (Zilles)") AnnotationAssertion(Annotation( "BIRNLEX:1672") "dorsal striatum") AnnotationAssertion(Annotation( "BTO:0000418") "striated nucleus") AnnotationAssertion( "UBERON:0002435") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "striatum") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/3/33/BrainCaudatePutamen.svg"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "GO"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "BTO"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "NIFSTD"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (primary visual cortex) AnnotationAssertion(Annotation( "BrainInfo:2102") "A subdivision of the cytoarchitecturally defined occipital region of cerebral cortex in the human. Defined by the band of Gennari, which gives it the name striate (furrowed) area, it occupies the banks of the calcarine sulcus which are located in the cuneus and the lingual gyrus of the occipital lobe. Cytoarchitecturally it is bounded by the area 18 of Brodmann (human) which surrounds it ( Brodmann-1909 ). In the mouse ( Paxinos-2001 ) and the rat ( Swanson-1998 ) it is located on the dorsolateral surface of the cerebral hemisphere[BrainInfo].") AnnotationAssertion(Annotation( "FMA"^^xsd:string) "We explicitly merge two FMA classes here, as BA17 is equivalent to V1. In future these may be separated into functional and cytoarchitecturally defined regions with an overlaps relationship between them") AnnotationAssertion(Annotation( "BIRNLEX:1748") Annotation( "NIFSTD:SumsDB_abbrevSource"^^xsd:string) Annotation( ) "B09-17") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:17") AnnotationAssertion( "BAMS:V1") AnnotationAssertion( "BAMS:VISp") AnnotationAssertion( "BIRNLEX:1748") AnnotationAssertion( "BM:Tel-Cx-V1") AnnotationAssertion( "BTO:0004703") AnnotationAssertion( "EMAPA:35708") AnnotationAssertion( "FMA:236871") AnnotationAssertion( "FMA:68614") AnnotationAssertion( "MA:0000914") AnnotationAssertion( "MBA:385") AnnotationAssertion( "NCIT:C97340") AnnotationAssertion( "NLX:143552") AnnotationAssertion( "PBA:10026") AnnotationAssertion(Annotation( "ncithesaurus:Primary_Visual_Cortex") "UMLS:C0038446") AnnotationAssertion(Annotation( "BIRNLEX:1748") "UMLS:C1272535") AnnotationAssertion(Annotation( "BIRNLEX:1748") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=702") AnnotationAssertion(Annotation( ) "BA17") AnnotationAssertion(Annotation( "BIRNLEX:1748") "Brodmann (1909) area 17") AnnotationAssertion(Annotation( ) "Brodmann area 17") AnnotationAssertion(Annotation( "BIRNLEX:1748") "Brodmann area 17, striate") AnnotationAssertion(Annotation( "BIRNLEX:1748") "area 17 of Brodmann-1909") AnnotationAssertion(Annotation( "BIRNLEX:1748") "b09-17") AnnotationAssertion(Annotation( ) Annotation( "FMA:236871") "striate cortex") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "BA17") AnnotationAssertion(Annotation( ) "BA17") AnnotationAssertion(Annotation( ) "Brodmann area 17") AnnotationAssertion(Annotation( ) "V1") AnnotationAssertion(Annotation( ) "area 17 of Brodmann") AnnotationAssertion( "area striata") AnnotationAssertion(Annotation( "BrainInfo:2102") "calcarine cortex") AnnotationAssertion(Annotation( "NeuroNames:702") "nerve X") AnnotationAssertion(Annotation( "GEO:GSM336648") "occipital visual neocortex") AnnotationAssertion(Annotation( "BAMS:VISp") "primary visual area") AnnotationAssertion(Annotation( "BAMS:17") "striate area") AnnotationAssertion(Annotation( "BTO:0004703") "visual area V1") AnnotationAssertion(Annotation( ) "visual area one") AnnotationAssertion(Annotation( ) "visual association area") AnnotationAssertion(Annotation( ) "visual association cortex") AnnotationAssertion( "UBERON:0002436") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "primary visual cortex") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/7/70/Brodmann_areas_17_18_19.png"^^xsd:anyURI) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf(Annotation( "NIFSTD"^^xsd:string) ) SubClassOf(Annotation( "WP"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (cerebral hemisphere white matter) AnnotationAssertion(Annotation( ) "White matter that is part of a cerebral hemisphere.") AnnotationAssertion( "sometimes the term 'cerebral white matter' may be used generically but here is refers specifically to the white matter in a hemisphere") AnnotationAssertion(Annotation( "BTO"^^xsd:string) "The BTO class is inconsistent as it is part of the brain and spinal cord.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:cw") AnnotationAssertion( "BIRNLEX:711") AnnotationAssertion( "BTO:0000236") AnnotationAssertion( "CALOHA:TS-2362") AnnotationAssertion( "EMAPA:35237") AnnotationAssertion( "FMA:241998") AnnotationAssertion( "FMA:256174") AnnotationAssertion( "FMA:61822") AnnotationAssertion( "MA:0000945") AnnotationAssertion( "NCIT:C49347") AnnotationAssertion(Annotation( "BIRNLEX:711") "UMLS:C0152295") AnnotationAssertion(Annotation( "ncithesaurus:Cerebral_White_Matter") "UMLS:C0152295") AnnotationAssertion(Annotation( "BIRNLEX:711") "UMLS:C1284115") AnnotationAssertion(Annotation( "BIRNLEX:711") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=189") AnnotationAssertion( "cerebral hemisphere white matter") AnnotationAssertion(Annotation( "MA:0000945") "cerebral white matter") AnnotationAssertion(Annotation( "FMA:61822") "white matter structure of cerebral hemisphere") AnnotationAssertion( "uberon") AnnotationAssertion( "hemisphere white matter") AnnotationAssertion(Annotation( "FMA:256174") "region of cerebral white matter") AnnotationAssertion(Annotation( "NeuroNames:189") Annotation( ) "substantia medullaris cerebri") AnnotationAssertion( "UBERON:0002437") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "cerebral hemisphere white matter") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (ventral tegmental nucleus) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A nucleus of brain that is part of a ventral tegmental area.") AnnotationAssertion(Annotation( "FMA"^^xsd:string) "ventral and anterior tegmental nucleus are synonyms in FMA, but we split these into seperate classes. This is consistent with MA, ABA and neuronames, which treat these as distinct (NN suggest the anterior is a rodent specific structure)") AnnotationAssertion( "this is part of pons and brainstem in MA, but this leads to an inconsistency with ABA. We err on the side of safety, and exclude the relationship to the pons here.") AnnotationAssertion(Annotation( "BIRNLEX:1421") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "VTg") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:VTN") AnnotationAssertion( "BAMS:VTg") AnnotationAssertion( "BIRNLEX:1421") AnnotationAssertion( "DHBA:12266") AnnotationAssertion( "DMBA:17007") AnnotationAssertion( "EMAPA:35914") AnnotationAssertion( "FMA:72435") AnnotationAssertion( "HBA:9069") AnnotationAssertion( "MA:0001031") AnnotationAssertion( "MBA:757") AnnotationAssertion( "TAO:0000275") AnnotationAssertion(Annotation( "BIRNLEX:1421") "UMLS:C0175394") AnnotationAssertion( "ZFA:0000275") AnnotationAssertion(Annotation( "BIRNLEX:1421") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=518") AnnotationAssertion(Annotation( "FMA:72435") "deep tegmental nucleus of Gudden") AnnotationAssertion(Annotation( "FMA:72435") "ventral raphe tegmental nucleus") AnnotationAssertion(Annotation( "FMA:72435") "ventral tegmental nuclei") AnnotationAssertion(Annotation( "FMA:72435") "ventral tegmental nucleus (gudden)") AnnotationAssertion(Annotation( "FMA:72435") "ventral tegmental nucleus of Gudden") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:72435") Annotation( ) "anterior tegmental nuclei") AnnotationAssertion(Annotation( ) Annotation( "FMA:72435") Annotation( ) "anterior tegmental nucleus") AnnotationAssertion(Annotation( "NeuroNames:518") Annotation( ) "ganglion profundum tegmenti") AnnotationAssertion(Annotation( "NeuroNames:518") Annotation( ) "ganglion tegmenti ventrale") AnnotationAssertion(Annotation( "MA:0001031") "nucleus of Gudden") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) "nucleus tegmentales anteriores") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) "nucleus tegmentalis anterior") AnnotationAssertion(Annotation( "NeuroNames:518") Annotation( ) "nucleus tegmenti ventralis") AnnotationAssertion(Annotation( "NeuroNames:518") Annotation( ) "nucleus ventralis tegmenti") AnnotationAssertion(Annotation( "NeuroNames:518") Annotation( ) "nucleus ventralis tegmenti (Gudden)") AnnotationAssertion(Annotation( "TAO:0000275") "rostral tegmental nucleus") AnnotationAssertion( "UBERON:0002438") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "ventral tegmental nucleus") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "DHBA") Annotation( "EMAPA") Annotation( "MA") Annotation( "FMA"^^xsd:string) Annotation( "HBA"^^xsd:string) Annotation( "NIFSTD"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (myenteric nerve plexus) AnnotationAssertion(Annotation( "NLXANAT:100306") "One of two ganglionated neural networks which together form the enteric nervous system. The myenteric (Auerbach's) plexus is located between the longitudinal and circular muscle layers of the gut. Its neurons project to the circular muscle, to other myenteric ganglia, to submucosal ganglia, or directly to the epithelium, and play an important role in regulating and patterning gut motility.") AnnotationAssertion(Annotation( "MP:0010801") "plexus of unmyelinated nerve fibers and postganglionic autonomic cell bodies lying in the muscular coat of the esophagus, stomach and intestines that communicate with the submucosal, subserosal and enteric plexuses[MP][MP:0010801].") AnnotationAssertion(Annotation( "FMA"^^xsd:string) "note that FMA uses Meissner's plexus as a synonym, rather than separate class") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:myp") AnnotationAssertion( "BTO:0002436") AnnotationAssertion( "EMAPA:32847") AnnotationAssertion( "FMA:63252") AnnotationAssertion( "GAID:798") AnnotationAssertion( "MA:0001148") AnnotationAssertion( "MESH:D009197") AnnotationAssertion( "NCIT:C52748") AnnotationAssertion( "NLXANAT:100306") AnnotationAssertion(Annotation( "ncithesaurus:Myenteric_Nerve_Plexus") "UMLS:C0027028") AnnotationAssertion(Annotation( "NLXANAT:100306") "Auberbach plexus") AnnotationAssertion(Annotation( "NLXANAT:100306") "Auberbach's plexus") AnnotationAssertion(Annotation( "NLXANAT:100306") "Auberbachs plexus") AnnotationAssertion(Annotation( "FMA:63252") Annotation( "HP:0002251") "Auerbach's plexus") AnnotationAssertion(Annotation( "FMA:63252") "Remak's plexus") AnnotationAssertion( "myenteric plexus") AnnotationAssertion(Annotation( "FMA:63252") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "plexus nervosus submucosus") AnnotationAssertion(Annotation( "FMA:63252") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "plexus submucosus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:63252") Annotation( ) "Meissner's plexus") AnnotationAssertion(Annotation( "BTO:0002436") "plexus myentericus") AnnotationAssertion( "submucous plexus") AnnotationAssertion( "UBERON:0002439") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "myenteric nerve plexus") SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (inferior cervical ganglion) AnnotationAssertion(Annotation( ) "The inferior cervical ganglion is situated between the base of the transverse process of the last cervical vertebra and the neck of the first rib, on the medial side of the costocervical artery. Its form is irregular; it is larger in size than the middle cervical ganglion, and is frequently fused with the first thoracic ganglion. [WP,unvetted].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:ICGn") AnnotationAssertion( "BTO:0000240") AnnotationAssertion( "EHDAA:8939") AnnotationAssertion( "EMAPA:18439") AnnotationAssertion( "FMA:6961") AnnotationAssertion( "MA:0001154") AnnotationAssertion( "NCIT:C92211") AnnotationAssertion( "RETIRED_EHDAA2:0000815") AnnotationAssertion(Annotation( "ncithesaurus:Inferior_Cervical_Ganglion") "UMLS:C0229000") AnnotationAssertion( "variant cervical ganglion") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "EMAPA:18439") "cervico-thoracic") AnnotationAssertion(Annotation( "EMAPA:18439") "cervico-thoracic ganglion") AnnotationAssertion(Annotation( "BTO:0000240") "ganglion cervicale inferioris") AnnotationAssertion(Annotation( ) Annotation( ) "ganglion cervicale inferius") AnnotationAssertion(Annotation( "MA:0001154") "stellate ganglion") AnnotationAssertion( "UBERON:0002440") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "inferior cervical ganglion") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/e/e1/Gray844.png"^^xsd:anyURI) SubClassOf( ) # Class: (cervicothoracic ganglion) AnnotationAssertion(Annotation( "ISBN:0-683-40008-8"^^xsd:string) Annotation( "MESH:A08.340.315.350.800") Annotation( "MP:0001017") "The group of neurons formed by the fusion of the inferior cervical and first thoracic ganglia.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:GSTL") AnnotationAssertion( "BTO:0001815") AnnotationAssertion( "EMAPA:18226") AnnotationAssertion( "FMA:6469") AnnotationAssertion( "GAID:711") AnnotationAssertion( "MA:0001157") AnnotationAssertion( "MESH:D013233") AnnotationAssertion( "cervicothoracic sympathetic ganglion") AnnotationAssertion(Annotation( "FMA:6469") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "ganglion cervicothoracicum") AnnotationAssertion(Annotation( "FMA:6469") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "ganglion stellatum") AnnotationAssertion( "stellate ganglion") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002441") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "cervicothoracic ganglion") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/7/7a/Gray845.png"^^xsd:anyURI) SubClassOf( ) # Class: (axillary nerve trunk) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37719") AnnotationAssertion( "FMA:65265") AnnotationAssertion( "MA:0001175") AnnotationAssertion( "right axillary neural trunk") AnnotationAssertion(Annotation( "FMA:65265") "trunk of right axillary nerve") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "MA:0001175") "circumflex nerve trunk") AnnotationAssertion( "UBERON:0002442") AnnotationAssertion(rdfs:label "axillary nerve trunk") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (choroidal blood vessel) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A blood vessel that is part of a choroid [Automatically generated definition].") AnnotationAssertion( "EMAPA:17828") AnnotationAssertion( "FMA:76550") AnnotationAssertion( "MA:0001237") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "blood vessel of choroid") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "blood vessel of choroid coat") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "blood vessel of choroidea") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "blood vessel of posterior uvea") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "choroid blood vessel") AnnotationAssertion( "choroid blood vessels") AnnotationAssertion( "choroid blood vessels set") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "choroid coat blood vessel") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "choroidea blood vessel") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "posterior uvea blood vessel") AnnotationAssertion(Annotation( "FMA:76550") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "vasa sanguinea choroideae") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:76550") "set of choroid blood vessels") AnnotationAssertion( "UBERON:0002443") AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "cannot find singular in FMA, using Set class") AnnotationAssertion(rdfs:label "choroidal blood vessel") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lens fiber) AnnotationAssertion(Annotation( ) "A region of the lens consisting of packed elongated enucleate cells packed with crystallin.") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000444") Annotation( "VHOG"^^xsd:string) Annotation( ) "Fibres resembling a ribbon and arranged in very thin plates in the lens. [Dorian_AF, Elsevier's_encyclopaedic_dictionary_of_medicine, Part_B:_Anatomy_(1988)_Amsterdam_etc.:_Elsevier][VHOG]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000444") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "DOI:10.1167/iovs.03-0466 Sivak JG, Through the lens clearly: phylogeny and development, The Proctor lecture. Investigative ophthalmology and visual science (2004)") "(...) the line, or Y, or star sutures common to mammalian lenses, including those of primates. In the case of line or Y sutures, the overlapping of lens fibers in each successive shell is coincident and results in the formation of four or six three-dimensional suture planes that extend from the lens nucleus to the periphery.[well established][VHOG]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0000724") AnnotationAssertion( "CALOHA:TS-0544") AnnotationAssertion( "EHDAA:4745") AnnotationAssertion( "EHDAA:9065") AnnotationAssertion( "EMAPA:17841") AnnotationAssertion( "FMA:76827") AnnotationAssertion( "MA:0001304") AnnotationAssertion( "NCIT:C32976") AnnotationAssertion( "RETIRED_EHDAA2:0000979") AnnotationAssertion(Annotation( "ncithesaurus:Lens_Fiber") "UMLS:C0229224") AnnotationAssertion( "VHOG:0000444") AnnotationAssertion( "XAO:0004096") AnnotationAssertion(Annotation( "FMA:76827") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "fibrae lentis") AnnotationAssertion( "lens fibers") AnnotationAssertion( "lens fibers set") AnnotationAssertion( "lens fibres") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "EMAPA:17841") "lens fibre") AnnotationAssertion(Annotation( "FMA:76827") "set of lens fibers") AnnotationAssertion( "UBERON:0002444") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "lens fiber") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (ulnare) AnnotationAssertion(Annotation( ) Annotation( "PHENOSCAPE:ad"^^xsd:string) "The postaxial bone of the proximal carpal region. Found in close approximation to the ulna, often in articulation[PHENOSCAPE:ad].") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0000845") Annotation( "AAO"^^xsd:string) Annotation( "AAO:LAP"^^xsd:string) "One of two element that constitute the basal row of carpals. It articulates with the ulna, radius, radiale, centrale (element Y), and carpal 5(4). This element originates from one condensation center or the fusion of two elements (ulnare and intermedium). Occasionally it may fuse to carpal 5(4), the radiale, or other elements.[AAO]") AnnotationAssertion( "this bone is termed the triquetral bone in some mammalian taxa, notably humans") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0000845") AnnotationAssertion( "EMAPA:36167") AnnotationAssertion( "FMA:23715") AnnotationAssertion( "MA:0001347") AnnotationAssertion( "NCIT:C12858") AnnotationAssertion(Annotation( "ncithesaurus:Triangular_Bone") "UMLS:C0223739") AnnotationAssertion( "galen:Triquetral") AnnotationAssertion( "cuneiform bone of hand") AnnotationAssertion( "cuneiform bone of manus") AnnotationAssertion(Annotation( "FMA:23715") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "os triquetrum") AnnotationAssertion(Annotation( ) "os ulnare") AnnotationAssertion( "triangular bone") AnnotationAssertion(Annotation( "MA:0001347") Annotation( "NCBITaxon:9606"^^xsd:string) "triquetral") AnnotationAssertion( "triquetral bone") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "MA:0001347") "cuneiform of hand") AnnotationAssertion(Annotation( "MA:0001347") "triangular") AnnotationAssertion(Annotation( "MA:0001347") "triquetrum") AnnotationAssertion(Annotation( "MA:0001347") "ulnar carpal bone") AnnotationAssertion( "UBERON:0002445") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "ulnare") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/5/50/Carpus.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (patella) AnnotationAssertion(Annotation( ) Annotation( "PHENOSCAPE:ad"^^xsd:string) "A large sesamoid bone found in the distal femur/proximal tibial region of the hindlimb of tetrapods. The patella is the attachment site for proximal hindlimb tendons.[PHENOSCAPE:ad].") AnnotationAssertion( "patellar") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:35668") AnnotationAssertion( "FMA:24485") AnnotationAssertion( "GAID:203") AnnotationAssertion( "MA:0001374") AnnotationAssertion( "MESH:A02.835.232.500.624") AnnotationAssertion( "NCIT:C33282") AnnotationAssertion(Annotation( "ncithesaurus:Patella") "UMLS:C0030647") AnnotationAssertion( "galen:Patella") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:24485") "knee bone") AnnotationAssertion(Annotation( ) "knee cap") AnnotationAssertion(Annotation( ) Annotation( ) "patella") AnnotationAssertion( "UBERON:0002446") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "The patella, also known as the knee cap or kneepan, is the largest sesamoid bone in the human body. The primary functional role of the patella is knee extension. The patella has convergently evolved in placental mammals and birds; marsupials have only rudimentary, non-ossified patellae. In more primitive tetrapods, including living amphibians and reptiles, the muscle tendons from the upper leg are attached directly to the tibia, and the patella is not present. See also: fabella.") AnnotationAssertion(rdfs:label "patella") AnnotationAssertion( "Knee:diagram.svg"^^xsd:anyURI) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (palatine gland) AnnotationAssertion(Annotation( ) "The palatine glands form a continuous layer on its posterior surface and around the uvula. They are primarily mucous secreting glands, as opposed to serous or mixed secreting glands. [WP,unvetted].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:35643") AnnotationAssertion( "FMA:59795") AnnotationAssertion( "MA:0001584") AnnotationAssertion( "NCIT:C33249") AnnotationAssertion(Annotation( "ncithesaurus:Palatine_Salivary_Gland") "UMLS:C0930557") AnnotationAssertion( "palatine glands set") AnnotationAssertion( "palatine mucuous gland") AnnotationAssertion( "palatine salivary gland") AnnotationAssertion( "salivary palatine gland") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002447") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "palatine gland") SubClassOf(Annotation( "MP"^^xsd:string) ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (fungiform papilla) AnnotationAssertion(Annotation( "MGI:smb"^^xsd:string) Annotation( "MP:0006257") "Any of the mushroom-shaped papillae, which have a single taste bud at the tip, located mostly on the dorsal anterior portion of the tongue.") AnnotationAssertion(Annotation( ) "The fungiform papillae are mushroom shaped e (projections) on the tongue. They are located on the top (dorsal) surface of the tongue, scattered throughout the filiform papilla but mainly at the tip and lateral margins of the tongue. They have taste buds on their superior (upper) surface which can distinguish the five tastes: sweet, sour, bitter, salty, and umami. They have a core of connective tissue. They are innervated by the seventh cranial nerve, more specifically via the submandibular ganglion, chorda tympani, and geniculate ganglion ascending to the solitary nucleus (the sensory component of the Vagus nerve in the brainstem). [WP,unvetted][Wikipedia:Fungiform_papilla].") AnnotationAssertion( "In the mouse, Fungiform and palatal taste buds are innervated by the geniculate ganglion cells of the facial nerve[DOI:10.1523/JNEUROSCI.5142-05.2006]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:4106") AnnotationAssertion( "EMAPA:18272") AnnotationAssertion( "FMA:54821") AnnotationAssertion( "MA:0001595") AnnotationAssertion( "NCIT:C32644") AnnotationAssertion(Annotation( "BIRNLEX:4106") "UMLS:C0226968") AnnotationAssertion(Annotation( "BIRNLEX:4106") "UMLS:C0545784") AnnotationAssertion(Annotation( "ncithesaurus:Fungiform_Papilla") "UMLS:C0545784") AnnotationAssertion(Annotation( "BIRNLEX:4106") "UMLS:C1267558") AnnotationAssertion(Annotation( "FMA:54821") "fungiform papilla of tongue") AnnotationAssertion(Annotation( ) "fungiform papillae") AnnotationAssertion(Annotation( ) "fungiform papillae set") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "papillae fungiformes") AnnotationAssertion( "UBERON:0002448") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "fungiform papilla") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/6/6e/Gray1014.png"^^xsd:anyURI) SubClassOf( ) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (decidua) AnnotationAssertion(Annotation( ) Annotation( "MP:0004256") "The maternal uterine-derived portion of the placenta.") AnnotationAssertion( "TODO - check mp syn") AnnotationAssertion( "formed under the influence of progesterone and forms highly-characteristic cells. [Wikipedia:Decidua]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0001360") AnnotationAssertion( "CALOHA:TS-0193") AnnotationAssertion( "EMAPA:35269") AnnotationAssertion( "FMA:85538") AnnotationAssertion( "GAID:378") AnnotationAssertion( "MA:0001722") AnnotationAssertion( "MAT:0000290") AnnotationAssertion( "MESH:D003656") AnnotationAssertion( "MIAA:0000290") AnnotationAssertion( "NCIT:C32425") AnnotationAssertion(Annotation( "ncithesaurus:Decidua") "UMLS:C0011106") AnnotationAssertion(Annotation( "FMA:85538") "decidous membrane") AnnotationAssertion( "uberon") AnnotationAssertion( "decidua basalis") AnnotationAssertion( "endometrium") AnnotationAssertion(Annotation( ) "extraembryonic part of placenta") AnnotationAssertion(Annotation( ) "extraembryonic placenta") AnnotationAssertion(Annotation( "MP:0004256") "maternal decidual layer") AnnotationAssertion(Annotation( ) "maternal part of placenta") AnnotationAssertion(Annotation( "EMAPA:35269") "maternal placenta") AnnotationAssertion(Annotation( "GOC:dph") "maternal placenta") AnnotationAssertion( "placenta maternal decidual layer") AnnotationAssertion(Annotation( "BTO:0001360") "uterine decidua") AnnotationAssertion( "UBERON:0002450") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "decidua") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/f/fa/Gray33.png"^^xsd:anyURI) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf(Annotation( "maternal") Annotation( "MA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (endometrial gland) AnnotationAssertion(Annotation( ) "The mucous secreting gland associated with the mucuous membrane lining the uterus.") AnnotationAssertion( "simple or branched tubular") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0003433") AnnotationAssertion( "BTO:0004518") AnnotationAssertion( "EMAPA:29919") AnnotationAssertion( "MA:0001726") AnnotationAssertion( "NCIT:C33842") AnnotationAssertion(Annotation( "ncithesaurus:Uterine_Gland") "UMLS:C1183035") AnnotationAssertion(Annotation( "BTO:0003433") "endometrial gland") AnnotationAssertion( "endometrial mucuous gland") AnnotationAssertion( "endometrium gland") AnnotationAssertion(Annotation( "FMA:71647") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "glandulae uterinae") AnnotationAssertion( "uterine gland") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "glandulae uterinae") AnnotationAssertion( "UBERON:0002451") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "endometrial gland") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/2/28/Gray1169.png"^^xsd:anyURI) SubClassOf(Annotation( "MP"^^xsd:string) ) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (ethmoid sinus) AnnotationAssertion(Annotation( "ISBN:0-683-40008-8"^^xsd:string) Annotation( "MP:0002245") "The evaginations of the mucous membrane of the nasal cavity into the ethmoidal bony labyrinth, forming multiple small paranasal sinuses.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:84115") AnnotationAssertion( "GAID:356") AnnotationAssertion( "MA:0001792") AnnotationAssertion( "MESH:D005005") AnnotationAssertion( "NCIT:C12276") AnnotationAssertion(Annotation( "ncithesaurus:Ethmoid_Sinus") "UMLS:C0015028") AnnotationAssertion(Annotation( ) "ethmoidal bone sinus") AnnotationAssertion(Annotation( "FMA:84115") "ethmoidal sinus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "cellulae ethmoidales") AnnotationAssertion(Annotation( "FMA:84115") "ethmoidal air cell") AnnotationAssertion( "UBERON:0002453") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "ethmoid sinus") AnnotationAssertion( "Nnh:front.svg"^^xsd:anyURI) SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (dorsal metacarpal artery) AnnotationAssertion(Annotation( ) "Aanastomosis of dorsal carpal branch of the radial artery and the dorsal carpal branch of the ulnar artery near the back of the wrist. It is made up of the dorsal carpal branches of both the ulnar and radial arteries. It also anastomoses with the anterior interosseous artery and the posterior interosseous artery. The arch gives off three dorsal metacarpal arteries.") AnnotationAssertion( "check FMA, singular. specific subtypes e.g. FMA:22761 first dorsal metacarpal artery") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37079") AnnotationAssertion( "FMA:70800") AnnotationAssertion( "MA:0001944") AnnotationAssertion( "NCIT:C52980") AnnotationAssertion(Annotation( "ncithesaurus:Dorsal_Metacarpal_Artery") "UMLS:C0447094") AnnotationAssertion(Annotation( "FMA:70800") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "arteriae metacarpales dorsales") AnnotationAssertion( "dorsal metacarpal arteries") AnnotationAssertion( "dorsal metacarpal arteries set") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:70800") "set of dorsal metacarpal arteries") AnnotationAssertion( "UBERON:0002454") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "dorsal metacarpal artery") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/6/64/Gray529.png"^^xsd:anyURI) SubClassOf( ) # Class: (common plantar digital arteries) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37208") AnnotationAssertion( "FMA:70821") AnnotationAssertion( "MA:0001966") AnnotationAssertion(Annotation( "FMA:70821") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "arteriae digitales plantares communes") AnnotationAssertion( "common plantar digital arteries") AnnotationAssertion(Annotation( "FMA:70821") "common plantar digital arteries set") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "arteriae digitales plantares communes") AnnotationAssertion(Annotation( "FMA:70821") "set of common plantar digital arteries") AnnotationAssertion( "UBERON:0002455") AnnotationAssertion(rdfs:label "common plantar digital arteries") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/3/3e/Gray555.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (internal thoracic artery) AnnotationAssertion(Annotation( ) "An artery that supplies the anterior chest wall and the breasts. It is a paired artery, with one running along each side of the sternum, to continue after its bifurcation as the superior epigastric and musculophrenic arteries. [WP,unvetted].") AnnotationAssertion(Annotation( "MA"^^xsd:string) "MA has both mammary and thoracic") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0000880") AnnotationAssertion( "EHDAA:8585") AnnotationAssertion( "EMAPA:18617") AnnotationAssertion( "FMA:3960") AnnotationAssertion( "MA:0001982") AnnotationAssertion( "MA:0001984") AnnotationAssertion( "NCIT:C52941") AnnotationAssertion( "OpenCyc:Mx4rMe0MIao8EduQrwACs5b6Bw") AnnotationAssertion(Annotation( "ncithesaurus:Internal_Mammary_Artery") "UMLS:C0226276") AnnotationAssertion(Annotation( "MA:0001982") Annotation( ) "internal mammary artery") AnnotationAssertion( "internal thoracic mammary artery") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "arteria mammaria interna") AnnotationAssertion(Annotation( ) Annotation( ) "arteria thoracica interna") AnnotationAssertion(Annotation( "EMAPA:18617") "mammary artery") AnnotationAssertion( "UBERON:0002456") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "internal thoracic artery") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/5/5c/Gray522.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (intersomitic artery) AnnotationAssertion(Annotation( "MP:0010662") "The small branching sprouts of the dorsal aorta that grow across the medial surface of the somite, turn right angles to grow over that surface and then fuse with other sprouts and form the vertebral arteries adjacent to the neural tube; the intersomitic arteries supply the body wall and persist in the adult as the posterior intercostal, subcostal and the lumbar arteries.") AnnotationAssertion(Annotation( "ZFA:0001061") "Arteries that connect the dorsal aorta and the dorsal longitudinal anastomotic vessel. They run along the vertical myotomal boundaries. At early stages these vessels don't have venous or arteriproperty_value external_definitionmarkers. They form from the primary sprouts from the dorsal aorta[ZFA:0001061].") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000225") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0030223693 Liem KF, Bemis WE, Walker WF, Grande L, Functional Anatomy of the Vertebrates: An Evolutionary Perspective (2001) p.612") "Few changes of evolutionary significance occur in the branching pattern of the dorsal aorta. All vertebrates have (...) paired intersegmental arteries to the trunk, tail, and paired appendages.[well established][VHOG]") AnnotationAssertion( "UBERON:0006001") AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0000882") AnnotationAssertion( "EHDAA:4340") AnnotationAssertion( "EMAPA:17616") AnnotationAssertion( "MA:0001985") AnnotationAssertion( "TAO:0001061") AnnotationAssertion( "VHOG:0000225") AnnotationAssertion( "XAO:0004165") AnnotationAssertion( "ZFA:0001061") AnnotationAssertion(Annotation( "ZFA:0001061") "intersegmental artery") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "ZFA:0001061") Annotation( ) "intersegmental arteries") AnnotationAssertion( "UBERON:0002457") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "intersomitic artery") SubClassOf( ) SubClassOf( ) # Class: (spinal artery) AnnotationAssertion(Annotation( ) Annotation( ) "Arteries that supply the spinal cord.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0001890") AnnotationAssertion( "EHDAA:4355") AnnotationAssertion( "EMAPA:18241") AnnotationAssertion( "MA:0002043") AnnotationAssertion( "NCIT:C33587") AnnotationAssertion( "TAO:0000682") AnnotationAssertion(Annotation( "ncithesaurus:Spinal_Artery") "UMLS:C0447043") AnnotationAssertion( "ZFA:0000682") AnnotationAssertion(Annotation( "ZFA:0000682") Annotation( ) "spinal arteries") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002458") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "spinal artery") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (inferior palpebral vein) AnnotationAssertion(Annotation( ) "A blood vessel that drains from from an lower eyelid.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37156") AnnotationAssertion( "FMA:50913") AnnotationAssertion( "MA:0002147") AnnotationAssertion( "NCIT:C53049") AnnotationAssertion(Annotation( "ncithesaurus:Inferior_Palpebral_Vein") "UMLS:C1760539") AnnotationAssertion( "inferior palpebral veins") AnnotationAssertion( "inferior palpebral veins set") AnnotationAssertion( "vein of inferior eyelid") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "MA:0002147") "lower palpebral vein") AnnotationAssertion(Annotation( "FMA:70847") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "venae palpebrales inferiores") AnnotationAssertion( "UBERON:0002459") AnnotationAssertion(rdfs:label "inferior palpebral vein") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (vesical vein) AnnotationAssertion(Annotation( ) Annotation( "UBERON:cjm"^^xsd:string) "A tributary of the iliac vein that drains the urinary bladder.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37205") AnnotationAssertion( "MA:0002263") AnnotationAssertion(Annotation( "FMA:70911") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "venae vesicales") AnnotationAssertion(Annotation( ) "vesical veins") AnnotationAssertion( "vesical veins set") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002460") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "vesical vein") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/b/bd/Gray585.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (anterior abdominal wall muscle) AnnotationAssertion(Annotation( ) "Any skeletal muscle organ that is part of a anterior abdominal wall. Examples: the obliques, pyramidalis and transversus abdominus.") AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0000125") AnnotationAssertion( "EMAPA:17744") AnnotationAssertion( "EMAPA:17745") AnnotationAssertion( "FMA:20278") AnnotationAssertion( "MA:0002268") AnnotationAssertion( "NCIT:C52890") AnnotationAssertion(Annotation( "ncithesaurus:Anterior_Abdominal_Wall_Muscle") "UMLS:C1744565") AnnotationAssertion(Annotation( "FMA:20278") "muscle of anterior abdominal wall") AnnotationAssertion(Annotation( "UBERON:cjm"^^xsd:string) "ventral abdominal wall muscle") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002461") AnnotationAssertion(rdfs:label "anterior abdominal wall muscle") SubClassOf(Annotation( "true"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (erector spinae muscle group) AnnotationAssertion(Annotation( ) "A bundle of muscles and tendons that is paired and runs more or less vertically. It extends throughout the lumbar, thoracic and cervical regions, and lies in the groove to the side of the vertebral column.") AnnotationAssertion(Annotation( "MA"^^xsd:string) "isa muscle organ in MA.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0001652") AnnotationAssertion( "EHDAA2:0000454") AnnotationAssertion( "EHDAA:9456") AnnotationAssertion( "EMAPA:18168") AnnotationAssertion( "FMA:71302") AnnotationAssertion( "MA:0002289") AnnotationAssertion( "NCIT:C52902") AnnotationAssertion( "OpenCyc:Mx4rwC7lnJwpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Erector_Spinae") "UMLS:C0224301") AnnotationAssertion( "VHOG:0000984") AnnotationAssertion(Annotation( "MA:0002289") "erector spinae") AnnotationAssertion(Annotation( ) "extensor spinae") AnnotationAssertion(Annotation( ) "extensor spinae muscles") AnnotationAssertion(Annotation( "BTO:0001652") Annotation( ) "sacrospinalis") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0001652") "erector spinalis") AnnotationAssertion(Annotation( ) "extensor spinae muscle") AnnotationAssertion(Annotation( ) Annotation( ) "m. erector spinae") AnnotationAssertion( "UBERON:0002462") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "erector spinae muscle group") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/d/de/Gray1124.png"^^xsd:anyURI) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ) SubClassOf( ) SubClassOf(Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "Spinous processes of T1 and T2 thoracic vertebrae and the cervical vertebrae") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "Spinous processes of T1 and T2 thoracic vertebrae and the cervical vertebrae") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (muscle of posterior compartment of hindlimb stylopod) AnnotationAssertion(Annotation( ) "Any of the posterior thigh muscles. [WP,modified].") AnnotationAssertion( "check FMA, singular.") AnnotationAssertion( "UBERON:0008538") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0003179") AnnotationAssertion( "EHDAA2:0000727") AnnotationAssertion( "EHDAA:8295") AnnotationAssertion( "EMAPA:19145") AnnotationAssertion( "FMA:22427") AnnotationAssertion( "FMA:81022") AnnotationAssertion( "MA:0002312") AnnotationAssertion( "NCIT:C53042") AnnotationAssertion( "OpenCyc:Mx4rvVjdtJwpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Hamstring") "UMLS:C0584895") AnnotationAssertion( "VHOG:0000844") AnnotationAssertion(Annotation( "MA:0002312") "hamstring muscle") AnnotationAssertion(Annotation( "FMA:22427") "muscle of posterior compartment of thigh") AnnotationAssertion(Annotation( "FMA:22427") "posterior femoral muscle") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "VHOG:0000844") "hamstring") AnnotationAssertion(Annotation( ) Annotation( ) "muscularis compartimentum femoris posterius") AnnotationAssertion(Annotation( ) "posterior fascial compartment of thigh") AnnotationAssertion(Annotation( ) "posterior femoral muscles") AnnotationAssertion(Annotation( "FMA:81022") "set of hamstring muscles") AnnotationAssertion( "UBERON:0002463") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "muscle of posterior compartment of hindlimb stylopod") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/b/bc/Biceps_femoris_muscle_long_head.PNG"^^xsd:anyURI) AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/d/dc/Gray1239.png"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "sciatic nerve") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (nerve trunk) AnnotationAssertion(Annotation( "FMA:5913") "Segment of neural tree organ which consists of nerve fiber bundles aggregated to form a cable-like structure that branches off to different nerves; together with all nerves of the same tree. Example: trunk of cranial nerve, trunk of spinal nerve, trunk of peripheral nerve[FMA:5913].") AnnotationAssertion( "UBERON:0001147") AnnotationAssertion( ) AnnotationAssertion( "BTO:0000927") AnnotationAssertion( "EHDAA:4675") AnnotationAssertion( "EMAPA:16986") AnnotationAssertion( "FMA:14383") AnnotationAssertion( "FMA:5913") AnnotationAssertion( "MA:0000229") AnnotationAssertion( "MA:0002408") AnnotationAssertion(Annotation( "EMAPA:16986") "peripheral nerve trunk") AnnotationAssertion( "trunk of nerve") AnnotationAssertion( "trunk of peripheral nerve") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002464") AnnotationAssertion(rdfs:label "nerve trunk") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses( ) # Class: (lymphoid system) AnnotationAssertion(Annotation( ) "The lymphatic system in vertebrates is a network of conduits that carry a clear fluid called lymph. It also includes the lymphoid tissue through which the lymph travels. Lymphoid tissue is found in many organs, particularly the lymph nodes, and in the lymphoid follicles associated with the digestive system such as the tonsils. The system also includes all the structures dedicated to the circulation and production of lymphocytes, which includes the spleen, thymus, bone marrow and the lymphoid tissue associated with the digestive system[WP].") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0010522") Annotation( "AAO"^^xsd:string) Annotation( "AAO:BJB"^^xsd:string) "Part of the circulatory system which consists of a series of vessels which collect blood (exclusive of erythrocytes) which seep through capillary walls and return it to the veins.[AAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000842") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0030223693 Liem KF, Bemis WE, Walker WF, Grande L, Functional Anatomy of the Vertebrates: An Evolutionary Perspective (2001) p.627") "Tetrapods have evolved distinct lymphatic systems, in which lymphatic capillaries help drain most of the tissues of the body.[well established][VHOG]") AnnotationAssertion( "lymphoid") AnnotationAssertion( "The lymphatic system of anuran amphibians is characterized by large lymphatic sacs and two pairs of lymph hearts that return lymph into the venous circulation but no lymph vessels per se [10.1152/japplphysiol.00201.2013]") AnnotationAssertion( "The lymphatic systems of reptiles and some birds have lymph hearts, and both groups have extensive lymph vessels, but their functional role in both lymph movement and plasma volume homeostasis is almost completely unknown [10.1152/japplphysiol.00201.2013]") AnnotationAssertion(Annotation( ) "We follow FMA and MA in distinguishing between lymphatic system and lymphoid system, with lymhoid tissue part of the non-lymphatic component, although these terms are often used interchangeably. We assume the ZFA term lymphatic tissue actually corresponds to the broader class (e.g. ZFA lymph node in the ZFA lymphatic system). See tracker for more comments.") AnnotationAssertion( "UBERON:0002096") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0001043") AnnotationAssertion( "EHDAA:8677") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37664") AnnotationAssertion( "FMA:74594") AnnotationAssertion( "GAID:931") AnnotationAssertion( "MA:0002435") AnnotationAssertion( "MAT:0000197") AnnotationAssertion( "MIAA:0000197") AnnotationAssertion( "NCIT:C12746") AnnotationAssertion( "OpenCyc:Mx4rwQAKT5wpEbGdrcN5Y29ycA") AnnotationAssertion( "TAO:0000385") AnnotationAssertion(Annotation( "ncithesaurus:Lymphatic_System") "UMLS:C0024235") AnnotationAssertion( "VHOG:0000842") AnnotationAssertion( "XAO:0003199") AnnotationAssertion( "ZFA:0000385") AnnotationAssertion(Annotation( "ZFA:0000385") "lymphatic system") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "lymphatic circulatory system") AnnotationAssertion(Annotation( ) "lymphatic drainage system") AnnotationAssertion(Annotation( ) Annotation( ) "systema lymphoideum") AnnotationAssertion( "UBERON:0002465") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "lymphoid system") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/b/b3/TE-Lymphatic_system_diagram.svg"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (intestine secretion) AnnotationAssertion(Annotation( ) "Clear to pale yellow watery secretions from the glands lining the small intestine walls. Secretion is stimulated by the mechanical pressure of partly digested food in the intestine.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0000644") AnnotationAssertion( "FMA:62974") AnnotationAssertion( "GAID:1162") AnnotationAssertion( "MA:0002515") AnnotationAssertion( "MESH:D007419") AnnotationAssertion( "NCIT:C32875") AnnotationAssertion(Annotation( "ncithesaurus:Intestinal_Secretion") "UMLS:C0021849") AnnotationAssertion(Annotation( "FMA:62974") "intestinal secretion") AnnotationAssertion(Annotation( ) "succus entericus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0000644") "intestinal juice") AnnotationAssertion( "UBERON:0002466") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "intestine secretion") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (filiform papilla) AnnotationAssertion(Annotation( ) "The filiform papillae are thin, long 'V'-shaped cones that don't contain taste buds but are the most numerous. These papillae are mechanical and not involved in gustation covering most of the dorsum (upper surface). They are small and arranged in lines parallel to the V-shaped row of circumvallate papillae, except at the tip of the tongue where they are aligned transversely. Projecting from their apices are numerous filamentous processes, or secondary papillae. These are of a whitish tint, owing to the thickness and density of the epithelium of which they are composed. This epithelium has undergone a peculiar modification as the cells have become cornified and elongated into dense, imbricated, brush-like processes. They contain also a number of elastic fibers, which render them firmer and more elastic than the papillae of mucous membrane generally. The larger and longer papillae of this group are sometimes termed papillae conicae. Fungiform papillae are found dispersed throughout the filiform papillae. [WP,unvetted].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:4104") AnnotationAssertion( "EMAPA:18873") AnnotationAssertion( "FMA:54820") AnnotationAssertion( "MA:0002678") AnnotationAssertion( "NCIT:C32604") AnnotationAssertion(Annotation( "BIRNLEX:4104") "UMLS:C0226966") AnnotationAssertion(Annotation( "BIRNLEX:4104") "UMLS:C0545782") AnnotationAssertion(Annotation( "ncithesaurus:Filiform_Papilla") "UMLS:C0545782") AnnotationAssertion(Annotation( "BIRNLEX:4104") "UMLS:C1267556") AnnotationAssertion(Annotation( "FMA:54820") "filiform papilla of tongue") AnnotationAssertion( "filiform papillae") AnnotationAssertion( "filiform papillae set") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "papillae filiformes") AnnotationAssertion( "UBERON:0002467") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "filiform papilla") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/3/31/Gray1016.png"^^xsd:anyURI) SubClassOf( ) # Class: (foliate papilla) AnnotationAssertion(Annotation( "ISBN:0-8036-0655-9") Annotation( "MGI:smb"^^xsd:string) Annotation( "MP:0006259") "Any of the papillae located on the sides of the tongue.") AnnotationAssertion(Annotation( ) "Taste-buds, the end-organs of the gustatory sense, are scattered over the mucous membrane of the mouth and tongue at irregular intervals. They occur especially in the sides of the vallate papillae. There is a localized area at the side of the base of the tongue, the foliate papillae, in which they are especially abundant. [WP,unvetted][Wikipedia:Foliate_papilla].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:4105") AnnotationAssertion( "EMAPA:32788") AnnotationAssertion( "FMA:54823") AnnotationAssertion( "MA:0002679") AnnotationAssertion( "NCIT:C32619") AnnotationAssertion(Annotation( "BIRNLEX:4105") "UMLS:C0226969") AnnotationAssertion(Annotation( "BIRNLEX:4105") "UMLS:C0545785") AnnotationAssertion(Annotation( "ncithesaurus:Foliate_Papilla") "UMLS:C0545785") AnnotationAssertion(Annotation( "FMA:54823") "foliate papilla of tongue") AnnotationAssertion( "foliate papillae") AnnotationAssertion( "foliate papillae set") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "papillae foliatae") AnnotationAssertion( "UBERON:0002468") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "foliate papilla") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/c/c0/Gray1021.png"^^xsd:anyURI) SubClassOf( ) # Class: (esophagus mucosa) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A mucosa that is part of a esophagus [Automatically generated definition].") AnnotationAssertion( "UBERON:0003345") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0002859") AnnotationAssertion( "EMAPA:26981") AnnotationAssertion( "FMA:62996") AnnotationAssertion( "MA:0002680") AnnotationAssertion( "NCIT:C32538") AnnotationAssertion(Annotation( "ncithesaurus:Esophageal_Mucosa") "UMLS:C0227176") AnnotationAssertion( "esophageal mucosa") AnnotationAssertion( "esophageal mucous membrane") AnnotationAssertion(Annotation( "FMA:62996") "esophagus mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "esophagus mucous membrane") AnnotationAssertion(Annotation( "FMA:62996") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "lamina muscularis mucosae oesophageae") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of esophagus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of oesophagus") AnnotationAssertion( "mucous membrane of esophagus") AnnotationAssertion(Annotation( "FMA:62996") "mucous membrane of oesophagus") AnnotationAssertion(Annotation( "FMA:62996") "oesophageal mucosa") AnnotationAssertion( "oesophagus mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "oesophagus mucous membrane") AnnotationAssertion( "tunica mucosa esophagi") AnnotationAssertion(Annotation( "FMA:62996") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "tunica mucosa oesophageae") AnnotationAssertion( "tunica mucosa oesophagi") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:62996") Annotation( ) "muscularis mucosae of oesophagus") AnnotationAssertion(Annotation( "BTO:0002859") "tunica mucosa oesophagi") AnnotationAssertion( "UBERON:0002469") AnnotationAssertion(rdfs:label "esophagus mucosa") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (autopod region) AnnotationAssertion(Annotation( ) Annotation( ) "Terminal segment of free limb, immediately distal to the zeugopod region. The fully developed autopod consists of the autopod skeleton plus associated structures such as integument, muscle tissue, vasculature etc. The autopod is divided into mesopodial, metapodiual, and acropodial segments. Examples: human hand, mouse paw, human foot.") AnnotationAssertion( "Naming conventions for pod terms under discussion within phenoscape group; note that this refers to the limb segment, not just the skeleton.") AnnotationAssertion(Annotation( "MA:0002714") "autopod") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0004359") AnnotationAssertion( "EFO:0000877") AnnotationAssertion( "EMAPA:32722") AnnotationAssertion( "FMA:83015") AnnotationAssertion( "MA:0002714") AnnotationAssertion( "MAT:0000091") AnnotationAssertion( "MIAA:0000091") AnnotationAssertion( "NCIT:C77660") AnnotationAssertion(Annotation( "ncithesaurus:Paw") "UMLS:C0687080") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "autopodial limb segment") AnnotationAssertion( "autopodial segment") AnnotationAssertion( "autopodium") AnnotationAssertion( "autopodium region") AnnotationAssertion(Annotation( "FMA:83015") "distal free limb segment") AnnotationAssertion(Annotation( "FMA:83015") "distal segment of free limb") AnnotationAssertion( "uberon") AnnotationAssertion( "autopodial element") AnnotationAssertion(Annotation( "EMAPA:32722") "distal segment of limb") AnnotationAssertion( "manus/pes") AnnotationAssertion( "paw") AnnotationAssertion( "paw/hand/foot/hoof") AnnotationAssertion( "pod") AnnotationAssertion( "UBERON:0002470") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "autopod region") SubClassOf( ) SubClassOf(Annotation( "definitional"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (zeugopod) AnnotationAssertion(Annotation( ) Annotation( "PHENOSCAPE:curators"^^xsd:string) "The middle free limb segment, between the autopod and stylopod segments. Includes as parts the zeugopodial skeleton. Examples: There are two types of zeugopod: forelimb zeugopod (aka forearm), hindlimb zeugopod (aka crus).") AnnotationAssertion( "zeugopodial") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "middle part of limb") AnnotationAssertion( "EFO:0000878") AnnotationAssertion( "FMA:83016") AnnotationAssertion( "MA:0002716") AnnotationAssertion( "MAT:0000092") AnnotationAssertion( "MIAA:0000092") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "epipodium") AnnotationAssertion(Annotation( "FMA:83016") "middle free limb segment") AnnotationAssertion( "middle limb segment") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "zeugopod limb segment") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "zeugopodial limb segment") AnnotationAssertion( "zeugopodium") AnnotationAssertion( "zygopod") AnnotationAssertion( "zygopodium") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:83016") "middle segment of free limb") AnnotationAssertion( "UBERON:0002471") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "There exists some controversy about which podial segments are present in some fishes, e.g. if the autopod is not newly evolved in tetrapods, there is a question as to which segments are actually present in basal vertebrate taxa.[PHENOSCAPE:curators]") AnnotationAssertion(rdfs:label "zeugopod") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (stylopod) AnnotationAssertion(Annotation( ) "The proximal free limb segment. Includes as parts the stylopod skeleton.") AnnotationAssertion( "stylopodial") AnnotationAssertion( "Naming conventions for pod terms under discussion within phenoscape group") AnnotationAssertion( "proximal part of limb") AnnotationAssertion( "EFO:0000879") AnnotationAssertion( "FMA:83014") AnnotationAssertion( "MA:0002717") AnnotationAssertion( "MAT:0000093") AnnotationAssertion( "MIAA:0000093") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "propodium") AnnotationAssertion(Annotation( "FMA:83014") "proximal free limb segment") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "stylopodial limb segment") AnnotationAssertion( "stylopodium") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:83014") "proximal segment of free limb") AnnotationAssertion( "UBERON:0002472") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "stylopod") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (intercerebral commissure) AnnotationAssertion(Annotation( ) "A commissure that connects the two cerebral hemispheres. Examples: anterior commissure, corpus callosum.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:35435") AnnotationAssertion( "FMA:67930") AnnotationAssertion( "MA:0002721") AnnotationAssertion( "uberon") AnnotationAssertion( "commissure of cerebrum") AnnotationAssertion( "inter-hemispheric commissure") AnnotationAssertion(Annotation( "MA:0002721") "interhemispheric commissure") AnnotationAssertion( "UBERON:0002473") AnnotationAssertion(rdfs:label "intercerebral commissure") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (cerebellar peduncular complex) AnnotationAssertion(Annotation( "BIRNLEX:970") "A composite structure of the brain stem, which is subdivided into the superior cerebellar peduncle of pons, the decussation of superior cerebellar peduncle and the superior cerebellar peduncle of midbrain (MM)[NIF, based on NN].") AnnotationAssertion( "TODO - this requires work for making consistent with ABA, which strictly separates cerebellum from brainstem. in MA, cerebellar peduncle is part of both brainstem and cerebellar white matter.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:cbp") AnnotationAssertion( "BIRNLEX:970") AnnotationAssertion( "FMA:77791") AnnotationAssertion( "MBA:752") AnnotationAssertion(Annotation( "BIRNLEX:970") "UMLS:C0228514") AnnotationAssertion(Annotation( "BIRNLEX:970") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=224") AnnotationAssertion( "cerebellar peduncles") AnnotationAssertion(Annotation( "BIRNLEX:970") "cerebellar peduncles and decussations") AnnotationAssertion( "cerebellar peduncles set") AnnotationAssertion( "cerebellum peduncles") AnnotationAssertion(Annotation( "FMA:77791") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "pedunculi cerebellares") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:224") "basal ganglia (anatomic)") AnnotationAssertion(Annotation( "NeuroNames:224") Annotation( ) "corpus striatum (Savel'ev)") AnnotationAssertion(Annotation( "NeuroNames:224") Annotation( ) "ganglia basales") AnnotationAssertion(Annotation( "FMA:77791") "set of cerebellar peduncles") AnnotationAssertion( "UBERON:0002474") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "cerebellar peduncular complex") SubClassOf( ) SubClassOf(Annotation( "NIF-isa") ObjectSomeValuesFrom( )) SubClassOf(Annotation( "MA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (saphenous nerve) AnnotationAssertion(Annotation( ) "The largest cutaneous branch of the femoral nerve. [WP,unvetted].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:36625") AnnotationAssertion( "FMA:45262") AnnotationAssertion( "MA:0002761") AnnotationAssertion( "OpenCyc:Mx4rvY0kgpwpEbGdrcN5Y29ycA") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "nervus saphenus") AnnotationAssertion( "UBERON:0002475") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "saphenous nerve") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/d/de/Gray827.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lateral globus pallidus) AnnotationAssertion(Annotation( "BIRNLEX:1610") "The more lateral of the two segments of the globus pallidus, abutting the putamen.") AnnotationAssertion(Annotation( ) "The lateral globus pallidus (or external, GPe) receives a strong glutamatergic projection from the subthalamic nucleus. The two form a particular system: a coupled pacemaker. The axons of the external globus pallidum go essentially to the subthalamic nucleus. They go also to other elements of the basal ganglia system, the striatum, the substantia nigra pars reticulata, and the internal globus pallidus, where they release the neurotransmitter GABA. GPe is particular in comparison to the other elements of the set by the fact that it does not work as an output base of the basal ganglia (not sending axons to the thalamus) but as the main regulator of the basal ganglia system. It is sometimes used as a target for deep brain stimulation as a treatment for Parkinson's disease. [WP,unvetted][Wikipedia:Lateral_globus_pallidus].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:EGP") AnnotationAssertion( "BAMS:GPe") AnnotationAssertion( "BAMS:GPl") AnnotationAssertion( "BAMS:LGP") AnnotationAssertion( "BIRNLEX:1610") AnnotationAssertion( "BTO:0002247") AnnotationAssertion( "EHDAA2:0004462") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37638") AnnotationAssertion( "FMA:61839") AnnotationAssertion( "HBA:12897") AnnotationAssertion( "MA:0002767") AnnotationAssertion( "MBA:1022") AnnotationAssertion( "PBA:10099") AnnotationAssertion(Annotation( "BIRNLEX:1610") "UMLS:C0262267") AnnotationAssertion(Annotation( "BIRNLEX:1610") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=232") AnnotationAssertion( "external globus pallidus") AnnotationAssertion(Annotation( "BIRNLEX:1610") "external pallidum") AnnotationAssertion(Annotation( "BIRNLEX:1610") "external part of globus pallidus") AnnotationAssertion(Annotation( "BIRNLEX:1610") "globus pallidus extermal segment") AnnotationAssertion(Annotation( "BIRNLEX:1610") Annotation( "FMA:61839") Annotation( "MA:0002767") "globus pallidus external segment") AnnotationAssertion( "globus pallidus externus") AnnotationAssertion(Annotation( "BTO:0002247") "globus pallidus lateralis") AnnotationAssertion( "globus pallidus, lateral segment") AnnotationAssertion( "lateral pallidal segment") AnnotationAssertion(Annotation( "BIRNLEX:1610") "lateral pallidum") AnnotationAssertion( "lateral part of globus pallidus") AnnotationAssertion(Annotation( "BIRNLEX:1610") "lateral segment of globus pallidus") AnnotationAssertion(Annotation( "FMA:61839") "pallidus II") AnnotationAssertion(Annotation( "FMA:61839") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "pars lateralis globi pallidi medialis") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:232") Annotation( ) "globus pallidus (rat)") AnnotationAssertion(Annotation( "BAMS:GPl") "globus pallidus lateral part") AnnotationAssertion(Annotation( "MA:0002767") "globus pallidus lateral segment") AnnotationAssertion(Annotation( "NeuroNames:232") "globus pallidus, external segment") AnnotationAssertion(Annotation( "NeuroNames:232") "globus pallidus, lateral part") AnnotationAssertion(Annotation( "NeuroNames:232") Annotation( ) "globus pallidus, pars externa") AnnotationAssertion(Annotation( "NeuroNames:232") "lateral division of globus pallidus") AnnotationAssertion(Annotation( "NeuroNames:232") "lateral segment of the globus pallidus") AnnotationAssertion(Annotation( "NeuroNames:232") Annotation( ) "nucleus lateralis globi pallidi") AnnotationAssertion(Annotation( "BTO:0002247") "pallidum I") AnnotationAssertion(Annotation( "BAMS:GPe") "pallidum dorsal region external segment") AnnotationAssertion( "UBERON:0002476") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "lateral globus pallidus") AnnotationAssertion( "Brain:structure.gif"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses(Annotation( "lexical"^^xsd:string) ) # Class: (medial globus pallidus) AnnotationAssertion(Annotation( "BIRNLEX:1555") "The more medial segment of the globus pallidus.") AnnotationAssertion(Annotation( ) "The medial globus pallidus (or internal, GPi) is one of the output nuclei of the basal ganglia. The GABA-containing neurons send their axons to specific nuclei of the dorsal thalamus (VA and VL), to the centromedian complex and to the pedunculopontine complex. The efferent bundle is constituted first of the ansa and fasciculus lenticularis, then crosses the internal capsule as the Edinger's comb system then arrives at the laterosuperior corner of the subthalamic nucleus and constitutes the Forel's field H2, then H, and suddenly changes its direction to form H1 that goes to the inferior part of the thalamus. The distribution of axonal islands is widespread in the lateral region of the thalamus. The innervation of the central region is done by collaterals. [WP,unvetted][Wikipedia:Medial_globus_pallidus].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:GPi") AnnotationAssertion( "BAMS:GPm") AnnotationAssertion( "BAMS:IGP") AnnotationAssertion( "BAMS:MGP") AnnotationAssertion( "BIRNLEX:1555") AnnotationAssertion( "BTO:0002248") AnnotationAssertion( "DHBA:10344") AnnotationAssertion( "DMBA:15830") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37639") AnnotationAssertion( "FMA:61840") AnnotationAssertion( "HBA:12898") AnnotationAssertion( "MA:0002768") AnnotationAssertion( "MBA:1031") AnnotationAssertion( "PBA:10098") AnnotationAssertion(Annotation( "BIRNLEX:1555") "UMLS:C0262283") AnnotationAssertion(Annotation( "BIRNLEX:1555") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=233") AnnotationAssertion(Annotation( "FMA:61840") "entopeduncular nucleus (monakow)") AnnotationAssertion(Annotation( ) "globus pallidus interna") AnnotationAssertion(Annotation( "FMA:61840") "globus pallidus internal segment") AnnotationAssertion(Annotation( "FMA:61840") "globus pallidus internus") AnnotationAssertion(Annotation( ) "globus pallidus internus") AnnotationAssertion(Annotation( "FMA:61840") "globus pallidus medial segment") AnnotationAssertion(Annotation( "BTO:0002248") "globus pallidus medialis") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) "globus pallidus medialis") AnnotationAssertion(Annotation( ) "globus pallidus medialis") AnnotationAssertion(Annotation( "FMA:61840") "globus pallidus, medial segment") AnnotationAssertion(Annotation( "FMA:61840") "internal globus pallidus") AnnotationAssertion(Annotation( "BIRNLEX:1555") "internal pallidum") AnnotationAssertion(Annotation( "BIRNLEX:1555") "internal part of globus pallidus") AnnotationAssertion(Annotation( "FMA:61840") "medial pallidal segment") AnnotationAssertion(Annotation( "FMA:61840") "medial part of globus pallidus") AnnotationAssertion(Annotation( "BIRNLEX:1555") "medial segment of globus pallidus") AnnotationAssertion(Annotation( "FMA:61840") "mesial pallidum") AnnotationAssertion(Annotation( "FMA:61840") "pallidus I") AnnotationAssertion(Annotation( "FMA:61840") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "pars medialis globi pallidi") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "MA:0002768") "entopeduncular nucleus") AnnotationAssertion(Annotation( "MA:0002768") "globus pallidus inernal segment") AnnotationAssertion(Annotation( "BAMS:GPm") "globus pallidus medial part") AnnotationAssertion(Annotation( "MA:0002768") "globus pallidus medial segment") AnnotationAssertion(Annotation( "NeuroNames:233") Annotation( ) "globus pallidus pars medialis") AnnotationAssertion(Annotation( "NeuroNames:233") "globus pallidus, internal segment") AnnotationAssertion(Annotation( "NeuroNames:233") "globus pallidus, medial part") AnnotationAssertion(Annotation( "NeuroNames:233") Annotation( ) "globus pallidus, pars interna") AnnotationAssertion(Annotation( "NeuroNames:233") "medial division of globus pallidus") AnnotationAssertion(Annotation( "BAMS:MGP") "medial globus pallidus (entopeduncular nucleus)") AnnotationAssertion(Annotation( "NeuroNames:233") "medial segment of the globus pallidus") AnnotationAssertion(Annotation( "NeuroNames:233") Annotation( ) "nucleus medialis globi pallidi") AnnotationAssertion( "pallidum I") AnnotationAssertion(Annotation( "BTO:0002248") "pallidum II") AnnotationAssertion(Annotation( "BAMS:GPi") "pallidum dorsal region internal segment") AnnotationAssertion( "pallidus I") AnnotationAssertion(Annotation( "BAMS:MGP") "principal medial geniculate nucleus") AnnotationAssertion( "UBERON:0002477") AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "See also: endopeduncular nucleus") AnnotationAssertion(rdfs:label "medial globus pallidus") AnnotationAssertion( "Brain:structure.gif"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "MA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (orbitosphenoid) AnnotationAssertion(Annotation( "ISBN:0-683-40008-8"^^xsd:string) Annotation( "MP:0004457") "The bone that is situated in the orbit on either side of the presphenoid; it generally forms a part of the sphenoid in the adult, and may be independent in the young.") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0000345") Annotation( "AAO"^^xsd:string) Annotation( "AAO:LAP"^^xsd:string) "Endochondral ossification of the lateral sides of the braincase.[AAO]") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0000253") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "Large median unpaired cartilage bone consisting of two diverging plates. Positioned medial to the eye. The orbitosphenoid develops from the Trabeculae communis and forms the anterior and anterolateral boundary of the orbital foramen and constitutes a significant part of the sidewalls and floor of the cranial cavity. Bordered by the lateral ethmoid anteriorly, and the pterosphenoid posteriorly, The orbitosphenoid may extend ventrally to meet the parasphenoid. In the adult, the orbitosphenoid is fused ventrally to the parasphenoid via a thin sheet of bone.[TAO]") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0000253") Annotation( "TAO"^^xsd:string) "relationship loss: develops_from taenia marginalis anterior (TAO:0001505)[TAO]") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0000253") Annotation( "TAO"^^xsd:string) "relationship loss: overlaps orbitosphenoid-lateral ethmoid joint (TAO:0001941)[TAO]") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0000253") Annotation( "TAO"^^xsd:string) "relationship loss: overlaps orbitosphenoid-prootic joint (TAO:0001794)[TAO]") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0000253") Annotation( "TAO"^^xsd:string) "relationship loss: overlaps pterosphenoid-orbitosphenoid joint (TAO:0001831)[TAO]") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0000345") Annotation( "AAO"^^xsd:string) "relationship loss: part_of braincase and otic capsule skeleton (AAO:0000052)[AAO]") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0000253") Annotation( "TAO"^^xsd:string) "relationship type change: overlaps neurocranium (TAO:0001580) CHANGED TO: develops_from neurocranium (UBERON:0001703)[TAO]") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0000253") Annotation( "TAO"^^xsd:string) "relationship type change: overlaps neurocranium (TAO:0001580) CHANGED TO: part_of neurocranium (UBERON:0001703)[TAO]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0000345") AnnotationAssertion( "EMAPA:18719") AnnotationAssertion( "FMA:52869") AnnotationAssertion( "MA:0002773") AnnotationAssertion( "TAO:0000253") AnnotationAssertion( "VHOG:0001153") AnnotationAssertion( "ZFA:0000253") AnnotationAssertion(Annotation( "FMA:52869") "ala minor (os sphenoidale)") AnnotationAssertion(Annotation( "FMA:52869") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "ala minor ossis sphenoidalis") AnnotationAssertion(Annotation( "FMA:52869") "ingrassia's process") AnnotationAssertion(Annotation( "FMA:52869") "lesser wing of sphenoid") AnnotationAssertion(Annotation( "FMA:52869") "lesser wing of sphenoidal bone") AnnotationAssertion(Annotation( ) "orbitosphenoid bone") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "alae parvae") AnnotationAssertion(Annotation( "MA:0002773") "lesser wing of sphenoid bone") AnnotationAssertion(Annotation( "ZFA:0000253") Annotation( ) "orbitosphenoids") AnnotationAssertion( "UBERON:0002478") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "orbitosphenoid") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/3/35/Gray145.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA-abduced-lr"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (dorsal lateral geniculate nucleus) AnnotationAssertion(Annotation( ) "The main division of the lateral geniculate body; consists of two magnocellular layers [TA] (strata magnocellularia [TA]) and four parvocellular layers [TA] (strata parvocellularia [TA]) and serves as a processing station in the major pathway from the retina to the cerebral cortex, receiving fibers from the optic tract and giving rise to the geniculocalcarine radiation to the visual cortex in the occipital lobe.") AnnotationAssertion(Annotation( "BIRNLEX:1595") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "DLG") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:DLG") AnnotationAssertion( "BAMS:LGd") AnnotationAssertion( "BIRNLEX:1595") AnnotationAssertion( "BM:GLd") AnnotationAssertion( "DHBA:10430") AnnotationAssertion( "DMBA:16436") AnnotationAssertion( "EMAPA:35290") AnnotationAssertion( "FMA:62214") AnnotationAssertion( "HBA:4440") AnnotationAssertion( "MA:0002775") AnnotationAssertion( "MBA:170") AnnotationAssertion( "PBA:128013074") AnnotationAssertion(Annotation( "BIRNLEX:1595") "UMLS:C0175292") AnnotationAssertion(Annotation( "BIRNLEX:1595") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=353") AnnotationAssertion( "lateral geniculate complex, dorsal part") AnnotationAssertion(Annotation( "NeuroNames:353") "lateral geniculate nucleus, dorsal part") AnnotationAssertion(Annotation( "FMA:62214") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "nucleus dorsalis corporis geniculati lateralis") AnnotationAssertion(Annotation( "BIRNLEX:1595") "nucleus geniculatus lateralis pars dorsalis") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:353") Annotation( ) "corpus geniculatum laterale (Hassler)") AnnotationAssertion(Annotation( "MA:0002775") "dorsal nucleus of lateral geniculate body") AnnotationAssertion(Annotation( "NeuroNames:353") "dorsal part of the lateral geniculate complex") AnnotationAssertion(Annotation( "BAMS:LGd") "lateral geniculate nucleus dorsal part") AnnotationAssertion(Annotation( "NeuroNames:353") Annotation( ) "nucleus corporis geniculati lateralis, pars dorsalis") AnnotationAssertion(Annotation( "NeuroNames:353") Annotation( ) "nucleus geniculatus lateralis dorsalis") AnnotationAssertion( "UBERON:0002479") AnnotationAssertion(rdfs:label "dorsal lateral geniculate nucleus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "NIFSTD"^^xsd:string) ObjectSomeValuesFrom( )) DisjointClasses(Annotation( "lexical"^^xsd:string) ) # Class: (ventral lateral geniculate nucleus) AnnotationAssertion(Annotation( "BIRNLEX:1597") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "DLG") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:DLG") AnnotationAssertion( "BAMS:LGV") AnnotationAssertion( "BAMS:LGv") AnnotationAssertion( "BAMS:PGn") AnnotationAssertion( "BAMS:VLG") AnnotationAssertion( "BIRNLEX:1597") AnnotationAssertion( "BM:LGv") AnnotationAssertion( "DHBA:13042") AnnotationAssertion( "DMBA:16341") AnnotationAssertion( "EMAPA:35908") AnnotationAssertion( "FMA:62215") AnnotationAssertion( "MA:0002776") AnnotationAssertion( "MBA:178") AnnotationAssertion(Annotation( "BIRNLEX:1597") "UMLS:C0175293") AnnotationAssertion(Annotation( "BIRNLEX:1597") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=354") AnnotationAssertion(Annotation( "BIRNLEX:1597") "corpus geniculatum externum, nucleus accessorius") AnnotationAssertion(Annotation( "BIRNLEX:1597") "corpus geniculatum laterale, pars oralis") AnnotationAssertion(Annotation( "BIRNLEX:1597") "dorsal_nucleus_of_lateral_geniculate_body") AnnotationAssertion(Annotation( "BIRNLEX:1597") "griseum praegeniculatum") AnnotationAssertion( "lateral geniculate complex, ventral part") AnnotationAssertion(Annotation( "BIRNLEX:1597") "lateral geniculate complex, ventral part (kolliker)") AnnotationAssertion(Annotation( "BIRNLEX:1597") "lateral geniculate nucleus, ventral part") AnnotationAssertion(Annotation( "BIRNLEX:1597") "nucleus corporis geniculati lateralis, pars ventralis") AnnotationAssertion(Annotation( "BIRNLEX:1597") "nucleus praegeniculatus") AnnotationAssertion(Annotation( "BIRNLEX:1597") "nucleus pregeniculatum") AnnotationAssertion(Annotation( "FMA:62215") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "nucleus pregeniculatus") AnnotationAssertion(Annotation( "FMA:62215") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "nucleus ventralis corporis geniculati lateralis") AnnotationAssertion(Annotation( "BIRNLEX:1597") "praegeniculatum") AnnotationAssertion( "pregeniculate nucleus") AnnotationAssertion(Annotation( "BIRNLEX:1597") "ventral part of the lateral geniculate complex") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:354") "lateral geniculate complex, ventral part (Kvlliker)") AnnotationAssertion(Annotation( "BAMS:LGv") "lateral geniculate nucleus ventral part") AnnotationAssertion(Annotation( "NeuroNames:354") Annotation( ) "nucleus geniculatus lateralis pars ventralis") AnnotationAssertion(Annotation( "MA:0002776") "ventral nucleus of lateral geniculate body") AnnotationAssertion( "UBERON:0002480") AnnotationAssertion(rdfs:label "ventral lateral geniculate nucleus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses(Annotation( "lexical"^^xsd:string) ) # Class: (bone tissue) AnnotationAssertion(Annotation( ) Annotation( "GO_REF:0000034"^^xsd:string) Annotation( "PSPUB:0000170"^^xsd:string) Annotation( "VSAO:0000047") "Skeletal tissue with a collagen-rich extracellular matrix vascularized, mineralized with hydroxyapatite and typically including osteocytes located in lacunae that communicate with one another by cell processes (in canaliculi). Bone is deposited by osteoblasts.") AnnotationAssertion( "see https://github.com/obophenotype/uberon/issues/27") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "VSAO:0000047") Annotation( "VSAO"^^xsd:string) Annotation( "GO_REF:0000034, http://dx.plos.org/10.1371/journal.pone.0051070") Annotation( "PSPUB:0000170"^^xsd:string) "Skeletal tissue with a collagen-rich extracellular matrix vascularized, mineralized with hydroxyapatite and typically including osteocytes located in lacunae that communicate with one another by cell processes (in canaliculi). Bone is deposited by osteoblasts.[VSAO]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "CALOHA:TS-2011") AnnotationAssertion( "EMAPA:35179") AnnotationAssertion( "FMA:224804") AnnotationAssertion( "MA:0002780") AnnotationAssertion( "MESH:D001842") AnnotationAssertion( "NCIT:C13076") AnnotationAssertion(Annotation( "ncithesaurus:Bone_Tissue") "UMLS:C0391978") AnnotationAssertion( "VSAO:0000047") AnnotationAssertion( "XAO:0004040") AnnotationAssertion( "ZFA:0005621") AnnotationAssertion( "galen:BoneTissue") AnnotationAssertion( "calcium tissue") AnnotationAssertion( "osseous tissue") AnnotationAssertion(Annotation( "VSAO:curator"^^xsd:string) "osteogenic tissue") AnnotationAssertion(Annotation( "XAO:0004040") "mineralized bone tissue") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "MESH:A02.835.232") "bone") AnnotationAssertion(Annotation( "FMA:224804") "portion of bone tissue") AnnotationAssertion( "UBERON:0002481") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "bone tissue") SubClassOf(Annotation( "VSAO"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses( ) # Class: (lamellar bone) AnnotationAssertion(Annotation( ) "Bone tissue that has a regular parallel alignment of collagen into sheets (lamellae) and is mechanically strong.") AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37625") AnnotationAssertion( "FMA:224806") AnnotationAssertion( "MA:0002781") AnnotationAssertion( "galen:LamellarBone") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002482") AnnotationAssertion(rdfs:comment "histological classification, lamellar vs woven. Note that only FMA has woven") AnnotationAssertion(rdfs:label "lamellar bone") SubClassOf( ) # Class: (trabecular bone tissue) AnnotationAssertion(Annotation( "ISBN:0-683-40008-8"^^xsd:string) Annotation( "MGI:csmith"^^xsd:string) Annotation( "MP:0000130") "Bone tissue that has a lattice-like or spongy structure; it is highly vascular and contains intercommunicating spaces filled with bone marrow.") AnnotationAssertion( ) AnnotationAssertion( "BTO:0001700") AnnotationAssertion( "CALOHA:TS-0110") AnnotationAssertion( "EMAPA:35873") AnnotationAssertion( "FMA:24019") AnnotationAssertion( "MA:0002782") AnnotationAssertion(Annotation( "FMA:24019") Annotation( "MA:0002782") "cancellous bone") AnnotationAssertion( "cancellous bone tissue") AnnotationAssertion( "spongy bone") AnnotationAssertion( "spongy bone tissue") AnnotationAssertion(Annotation( ) "substantia spongiosa") AnnotationAssertion(Annotation( ) "substantia spongiosa ossium") AnnotationAssertion(Annotation( "FMA:24019") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "substantia trabecularis") AnnotationAssertion( "trabecular bone") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0001700") "cancellated bone") AnnotationAssertion(Annotation( "BTO:0001700") "substantia trabecularis ossium") AnnotationAssertion(Annotation( "BTO:0001700") "trabecular substance") AnnotationAssertion( "UBERON:0002483") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "one of the two types of osseous tissue that form bones. Compared to compact bone, which is the other type of osseous tissue, it has a higher surface area but is less dense, softer, weaker, and less stiff. It typically occurs at the ends of long bones, proximal to joints and within the interior of vertebrae. Cancellous bone is highly vascular and frequently contains red bone marrow where hematopoiesis, which is the production of blood cells, occurs. The primary anatomical and functional unit of cancellous bone is the trabecula.") AnnotationAssertion(rdfs:label "trabecular bone tissue") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/3/34/Illu_compact_spongy_bone.jpg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (bone marrow cavity) AnnotationAssertion(Annotation( ) Annotation( "ISBN:0-683-40008-8"^^xsd:string) Annotation( "MP:0000065") "The medullary cavities of the bones where bone marrow is stored.") AnnotationAssertion(Annotation( ) ) AnnotationAssertion( "Located in the main shaft (cortical bone) of a long bone (diaphysis) (consisting mostly of compact bone), the medullary cavity has walls composed of spongy bone (cancellous bone) and is lined with a thin, vascular membrane (endosteum)[Wikipedia:Bone_marrow_of_ovaryry_cavity]") AnnotationAssertion(Annotation( "FMA"^^xsd:string) "not clear if the FMA intends to have two classes. MP:0000065: 'the medullary cavities of the bones.'. NCITA also has 'medullary bone'") AnnotationAssertion( ) AnnotationAssertion( "FMA:75147") AnnotationAssertion( "FMA:83698") AnnotationAssertion( "MA:0002783") AnnotationAssertion( "cavity of cancellous bone") AnnotationAssertion(Annotation( "FMA:83698") "marrow cavity") AnnotationAssertion(Annotation( "FMA:83698") "medullary cavity") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002484") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "bone marrow cavity") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (prostate duct) AnnotationAssertion(Annotation( "MP:0009734") "The minute canals that pass the prostatic secretions to the urethra.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:36568") AnnotationAssertion( "FMA:19580") AnnotationAssertion( "MA:0002785") AnnotationAssertion( "NCIT:C13102") AnnotationAssertion(Annotation( "ncithesaurus:Prostatic_Duct") "UMLS:C0227965") AnnotationAssertion( "duct of prostate") AnnotationAssertion( "duct of prostate gland") AnnotationAssertion( "prostate duct") AnnotationAssertion( "prostate gland duct") AnnotationAssertion( "prostatic duct") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002485") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "prostate duct") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (glottis) AnnotationAssertion(Annotation( "ISBN:0-397-51047-0") Annotation( "MGI:cwg"^^xsd:string) Annotation( "MP:0002255") "The vocal apparatus of the larynx, which includes the vocal cords and the opening between them.") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0010610") Annotation( "AAO"^^xsd:string) Annotation( "AAO:BMZ") "A small, slit-like aperture lying longitudinally on the floor of the pharynx.[AAO]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010610") AnnotationAssertion( "BTO:0001627") AnnotationAssertion( "FMA:55414") AnnotationAssertion( "GAID:343") AnnotationAssertion( "MA:0002788") AnnotationAssertion( "MESH:D005931") AnnotationAssertion( "NCIT:C12724") AnnotationAssertion(Annotation( "ncithesaurus:Glottis") "UMLS:C0017681") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002486") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "glottis") AnnotationAssertion( "Arytenoid:cartilage.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (tooth cavity) AnnotationAssertion(Annotation( "ISBN:0-683-40008-8"^^xsd:string) Annotation( "MP:0002819") "The central hollow space of a tooth.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:55660") AnnotationAssertion( "MA:0002792") AnnotationAssertion( "MESH:A14.254.900.265") AnnotationAssertion( "cavitas dentis") AnnotationAssertion(Annotation( "FMA:55660") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "cavitas pulparis") AnnotationAssertion( "lumen of tooth") AnnotationAssertion( "pulp cavity") AnnotationAssertion( "pulp cavity of tooth") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "MA:0002792") "cavity of tooth") AnnotationAssertion(Annotation( "MA:0002792") "tooth pulp cavity") AnnotationAssertion( "UBERON:0002487") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "tooth cavity") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (helix of outer ear) AnnotationAssertion(Annotation( ) "The helix is the prominent rim of the pinna.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:60992") AnnotationAssertion( "MA:0002793") AnnotationAssertion( "NCIT:C32724") AnnotationAssertion( "OpenCyc:Mx4rwRDEk5wpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Helix") "UMLS:C0229304") AnnotationAssertion( "helical part of pinna") AnnotationAssertion(Annotation( "MA:0002793") "helix") AnnotationAssertion( "helix (auricula)") AnnotationAssertion( "helix of auricle of ear") AnnotationAssertion( "helix of ear") AnnotationAssertion( "helix of pinna") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002488") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "helix of outer ear") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "Wikipedia-uncited") ObjectSomeValuesFrom( )) # Class: (coronal suture) AnnotationAssertion(Annotation( "ISBN:0-8036-0655-9") Annotation( "MGI:smb"^^xsd:string) Annotation( "MP:0003840") "The dense, fibrous connective tissue joint between the tetrapod parietal bones and the frontal bone.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:19225") AnnotationAssertion( "FMA:52928") AnnotationAssertion( "MA:0002795") AnnotationAssertion( "OpenCyc:Mx4rv2eGHZwpEbGdrcN5Y29ycA") AnnotationAssertion( "coronal suture of skull") AnnotationAssertion(Annotation( ) "fronto-parietal suture") AnnotationAssertion(Annotation( ) "frontoparietal suture") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "sutura coronalis") AnnotationAssertion( "UBERON:0002489") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "coronal suture") AnnotationAssertion( "Gray188-Coronal:suture.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (frontal suture) AnnotationAssertion(Annotation( ) "A suture that connects the two frontal bones of the skull.") AnnotationAssertion( "in humans, the frontal suture is a dense connective tissue structure that divides the two halves of the frontal bone of the skull in infants and children. It usually disappears by the age of six, with the two halves of the frontal bone being fused together. If it does not disappear it may be called a 'metopic suture' or 'sutura frontalis persistens. ' If the suture is not present at birth (craniosynostosis) it will cause a keel-shaped deformity of the skull called 'trigonocephaly. ' It is present in a fetal skull so that the skull can bend and is very elastic at the time of birth. The baby's head literally bends when coming out of the mother's womb. The space is filled as the child grows older. [WP,unvetted]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:19226") AnnotationAssertion( "EMAPA:35358") AnnotationAssertion( "FMA:52989") AnnotationAssertion( "MA:0002796") AnnotationAssertion( "frontal suture of skull") AnnotationAssertion( "median frontal suture") AnnotationAssertion(Annotation( ) "sutura frontalis") AnnotationAssertion(Annotation( "FMA:52989") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "sutura metopica") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "MA:0002796") "metopic suture") AnnotationAssertion(Annotation( ) Annotation( ) "sutura frontalis") AnnotationAssertion( "UBERON:0002490") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "frontal suture") AnnotationAssertion( "Frontal:suture.png"^^xsd:anyURI) AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/1/17/Gray134.png"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "two halves of the frontal bone") ObjectSomeValuesFrom( )) # Class: (lambdoid suture) AnnotationAssertion(Annotation( "ISBN:0-8036-0655-9") Annotation( "MGI:smb"^^xsd:string) Annotation( "MP:0003841") "The dense, fibrous connective tissue joint between the parietal bones and the occipital bone.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:19227") AnnotationAssertion( "FMA:52933") AnnotationAssertion( "MA:0002797") AnnotationAssertion( "lambdoid suture of skull") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "MA:0002797") "lambdoidal suture") AnnotationAssertion(Annotation( ) Annotation( ) "sutura lambdoidea") AnnotationAssertion( "UBERON:0002491") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "lambdoid suture") AnnotationAssertion( "Gray188-Lambdoid:suture.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "HP") ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (sagittal suture) AnnotationAssertion(Annotation( "ISBN:0-8036-0655-9") Annotation( "MGI:smb"^^xsd:string) Annotation( "MP:0003843") "The dense, fibrous connective tissue joint between the tetrapod parietal bones.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:19224") AnnotationAssertion( "FMA:52929") AnnotationAssertion( "MA:0002798") AnnotationAssertion( "sagittal suture of skull") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "sutura sagittalis") AnnotationAssertion( "UBERON:0002492") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "sagittal suture") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/2/24/Kort-lang-skalle.gif"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "both parietals") ObjectSomeValuesFrom( )) # Class: (uterine artery) AnnotationAssertion(Annotation( "MGI:monikat") Annotation( "MP:0003995") "The branch of the internal iliac artery that supplies the uterus and the upper part of the vagina.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:18829") AnnotationAssertion( "MA:0002799") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "arteria uterina") AnnotationAssertion( "UBERON:0002493") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "uterine artery") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/a/ae/Gray1170.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA-abduced-lr"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (papillary muscle of heart) AnnotationAssertion(Annotation( "MGI:anna"^^xsd:string) Annotation( "MP:0004058") "One of the group of myocardial bundles which terminate in the chordae tendineae that attach to the cusps of the atrioventricular valves; each ventricle has an anterior and a posterior papillary muscle; the right ventricle sometimes has a septal papillary muscle.") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001392") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( ) "On the internal or parietal surface of the left ventricle in man and in mammals are two papillary muscles, which are almost identical and well developed.[well established][VHOG]") AnnotationAssertion( "These muscles contract to tighten the chordae tendineae, which in turn prevent inversion. This occurs in response to pressure gradients. Instead they brace the valves against the high pressure, preventing regurgitation of ventricular blood back into the atrial cavities.[Wikipedia:Papillary_muscle]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EHDAA:8655") AnnotationAssertion( "FMA:12154") AnnotationAssertion( "GAID:175") AnnotationAssertion( "MA:0002800") AnnotationAssertion( "MESH:D010210") AnnotationAssertion( "NCIT:C33259") AnnotationAssertion( "OpenCyc:Mx4rDid0jLYYEduAAAACs2IKfQ") AnnotationAssertion(Annotation( "ncithesaurus:Papillary_Muscle") "UMLS:C0030352") AnnotationAssertion( "VHOG:0001392") AnnotationAssertion( "galen:PapillaryMuscle") AnnotationAssertion(Annotation( "MA:0002800") "papillary muscle") AnnotationAssertion(Annotation( "MA:0002800") "papillary muscle of ventricle") AnnotationAssertion(Annotation( "MA:0002800") "ventricular papillary muscle") AnnotationAssertion( "ventricule papillary muscle") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "musculus papillaris") AnnotationAssertion( "UBERON:0002494") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "papillary muscle of heart") AnnotationAssertion( "Papillary:muscles.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (long bone) AnnotationAssertion(Annotation( ) Annotation( ) Annotation( "https://github.com/obophenotype/uberon/issues/2010") Annotation( "https://github.com/obophenotype/uberon/issues/32") "A long bone is a bone that has a shaft and 2 ends and is longer than it is wide. Long bones have a thick outside layer of compact bone and an inner medullary cavity containing bone marrow. The ends of a long bone contain spongy bone and an epiphyseal plate or line depending on the stage of development. The epiphyseal plate is a hyaline cartilage, where new bone growth takes place, lengthening the bone prior to adulthood. Bone lengthening ceases when this cartilage is lost, leaving a remnant referred to as an epiphyseal line.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0004256") AnnotationAssertion( "EMAPA:35503") AnnotationAssertion( "FMA:7474") AnnotationAssertion( "MA:0002802") AnnotationAssertion( "NCIT:C33003") AnnotationAssertion( "OpenCyc:Mx4rv6axr5wpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Long_Bone") "UMLS:C0222647") AnnotationAssertion( "galen:LongBone") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0004256") "os longum") AnnotationAssertion( "UBERON:0002495") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "Endochondral_ossification is an essential process during the rudimentary formation of long bones, with the exception of the clavicle[Wikipedia:Endochondral_ossification]. The medial and and lateral ends undergo EO, the mid-portion is formed by a process with features of EO & IO (the process is shared by the mandible)[ISBN:9780397517251]") AnnotationAssertion(rdfs:label "long bone") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (stapes base) AnnotationAssertion(Annotation( ) "The flat portion of the stirrup of the ear that fits in the oval window between the middle and inner ear.") AnnotationAssertion( ) AnnotationAssertion( "FMA:52769") AnnotationAssertion( "MA:0002804") AnnotationAssertion(Annotation( "MA:0002804") "base of stapes") AnnotationAssertion(Annotation( ) "basis stapedis") AnnotationAssertion( "stapes footpiece") AnnotationAssertion(Annotation( "MA:0002804") "stapes footplate") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:52769") Annotation( ) "footplate") AnnotationAssertion( "UBERON:0002496") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "stapes base") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "MA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (acromion) AnnotationAssertion(Annotation( "VSAO:0005067") "Region of the scapula where the latter meets with the clavicle: attachment point of the clavicle to the scapula in some taxa.") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0000826") Annotation( "AAO"^^xsd:string) Annotation( "AAO:LAP"^^xsd:string) "Anterior rounded projection of the pars acromialis of the scapula.[AAO]") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0000826") Annotation( "AAO"^^xsd:string) "relationship loss: part_of pars acromialis (AAO:0000752)[AAO]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0000826") AnnotationAssertion( "EMAPA:25119") AnnotationAssertion( "FMA:23260") AnnotationAssertion( "GAID:187") AnnotationAssertion( "MA:0002805") AnnotationAssertion( "MESH:D000174") AnnotationAssertion( "NCIT:C32048") AnnotationAssertion( "OpenCyc:Mx4rvmrF8pwpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Acromion") "UMLS:C0001209") AnnotationAssertion( "VSAO:0005067") AnnotationAssertion(Annotation( "VSAO:0005067") "acromion process") AnnotationAssertion(Annotation( "VSAO:0005067") "scapular acromion") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "acromion of scapula") AnnotationAssertion(Annotation( ) "acromion of the scapula") AnnotationAssertion( "UBERON:0002497") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "acromion") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/7/79/Gray206.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (deltopectoral crest) AnnotationAssertion(Annotation( "ISBN:0-683-40008-8"^^xsd:string) Annotation( "MP:0004353") "A rough elevation at the middle of the lateral side of the shaft of the humerus to which the deltoid muscle attaches.") AnnotationAssertion( "In basal Tetrapodomorph lineages often the deltoid process and the pectoral processes are separate and thus should not be made exact synonyms to the deltopectoral crest.[PHENOSCAPE:ad]") AnnotationAssertion( ) AnnotationAssertion( "AAO:0000736") AnnotationAssertion( "EMAPA:25052") AnnotationAssertion( "FMA:23418") AnnotationAssertion( "MA:0002808") AnnotationAssertion(Annotation( "AAO:0000736") "crista ventralis") AnnotationAssertion(Annotation( "AAO:0000736") Annotation( "MP:0004353") "deltoid crest") AnnotationAssertion(Annotation( "MP:0004353") "deltoid eminence") AnnotationAssertion(Annotation( "MP:0004353") "deltoid impression") AnnotationAssertion(Annotation( "FMA:23418") "deltoid tuberosity") AnnotationAssertion(Annotation( "FMA:23418") "deltoid tuberosity of humerus") AnnotationAssertion(Annotation( "FMA:23418") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "tuberositas deltoidea") AnnotationAssertion( "tuberositas deltoidea (corpus humeri)") AnnotationAssertion(Annotation( ) Annotation( ) "tuberositas deltoidea humeri") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "AAO:0000736") "crista ventralis humeri") AnnotationAssertion(Annotation( "MP:0004353") "deltoid process") AnnotationAssertion( "pectoral process") AnnotationAssertion( "UBERON:0002498") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "deltopectoral crest") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/a/a7/HumerusFront.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (cochlear labyrinth) AnnotationAssertion(Annotation( ) "The labyrinth is a system of fluid passages in the inner ear, including both the cochlea, which is part of the auditory system, and the vestibular system, which provides the sense of balance. It is named by analogy with the mythical maze that imprisoned the Minotaur, because of its appearance. The bony labyrinth, or osseous labyrinth, is the network of passages with bony walls lined with periosteum. The bony labyrinth is lined with the membranous labyrinth. There is a layer of perilymph between them. The three parts of the bony labyrinth are the vestibule of the ear, the semicircular canals, and the cochlea. The vestibular system is the region of the inner ear where the semicircular canals converge, close to the cochlea (the hearing organ). The vestibular system works with the visual system to keep objects in focus when the head is moving. Joint and muscle receptors also are important in maintaining balance. The brain receives, interprets, and processes the information from these systems that control our balance. [WP,unvetted].") AnnotationAssertion( "we follow the FMA in placing this in the membranous labyrinth. Notes: The labyrinth can be divided by layer or by region. Bony vs. membranous / Vestibular vs. cochlear") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0004686") AnnotationAssertion( "EMAPA:36569") AnnotationAssertion( "FMA:61259") AnnotationAssertion( "MA:0002809") AnnotationAssertion( "NCIT:C32336") AnnotationAssertion(Annotation( "ncithesaurus:Cochlear_Labyrinth") "UMLS:C0931689") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002499") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "cochlear labyrinth") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/1/19/Gray923.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (zygomatic arch) AnnotationAssertion(Annotation( "ISBN:0-683-40008-8"^^xsd:string) Annotation( "MP:0004469") "The bony arch in vertebrates that extends along the side or front of the skull beneath the eye socket and is formed by the temporal process of the zygomatic bone and the zygomatic process of the temporal bone.") AnnotationAssertion( "The zygomatic arch is significant in evolutionary biology, as it is part of the structures derived from the ancestral single temporal fenestra of the synapsid ancestor of mammals.") AnnotationAssertion( "The zygomatic process of the temporal arises by two roots: an anterior, directed inward in front of the mandibular fossa, where it expands to form the articular tubercle. a posterior, which runs backward above the external acoustic meatus and is continuous with the supramastoid crest. The upper border of the arch gives attachment to the temporal fascia; the lower border and medial surface give origin to the Masseter") AnnotationAssertion( "The zygomatic arch is occasionally referred to as the zygoma, but this term usually refers to the zygomatic bone or occasionally the zygomatic process.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:36570") AnnotationAssertion( "FMA:53120") AnnotationAssertion( "MA:0002810") AnnotationAssertion( "MESH:D015050") AnnotationAssertion( "MFMO:0000108") AnnotationAssertion( "NCIT:C33897") AnnotationAssertion( "OpenCyc:Mx4rvih1YZwpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Zygomatic_Arch") "UMLS:C0162485") AnnotationAssertion( "galen:Zygoma") AnnotationAssertion( "zygoma") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "arcus zygomaticus") AnnotationAssertion( "UBERON:0002500") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "zygomatic arch") AnnotationAssertion( "Gray188-Sphenozygomatic:suture.png"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "MA"^^xsd:string) ) SubClassOf( ) SubClassOf(Annotation( "FMA-abduced-lr"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (oval window) AnnotationAssertion(Annotation( "ISBN:0-683-40008-8"^^xsd:string) Annotation( "MP:0004479") "The oval opening on the medial wall of the tympanic cavity leading into the vestibule, close to the foot of the stapes.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:19240") AnnotationAssertion( "FMA:56913") AnnotationAssertion( "GAID:882") AnnotationAssertion( "MA:0002813") AnnotationAssertion( "MESH:D010046") AnnotationAssertion( "NCIT:C32593") AnnotationAssertion( "oval window of petrous part of temporal bone") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "fenestra ovalis") AnnotationAssertion(Annotation( ) Annotation( ) "fenestra vestibuli") AnnotationAssertion(Annotation( "MA:0002813") "vestibular window") AnnotationAssertion( "UBERON:0002501") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "oval window") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/9/9d/Gray911.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (round window of inner ear) AnnotationAssertion(Annotation( "ISBN:0-683-40008-8"^^xsd:string) Annotation( "MP:0004480") "The opening on the medial wall of the middle ear leading into the cochlea, closed in life by the secondary tympanic membrane; serves to regulate fluid pressure in the inner ear.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:19239") AnnotationAssertion( "FMA:56932") AnnotationAssertion( "GAID:878") AnnotationAssertion( "MA:0002814") AnnotationAssertion( "MESH:D012405") AnnotationAssertion( "NCIT:C32594") AnnotationAssertion(Annotation( "MA:0002814") "round window") AnnotationAssertion( "round window of petrous part of temporal bone") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "MA:0002814") "cochlear window") AnnotationAssertion(Annotation( ) Annotation( ) "fenestra cochleae") AnnotationAssertion(Annotation( ) Annotation( ) "fenestra rotunda") AnnotationAssertion( "UBERON:0002502") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "round window of inner ear") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/9/9d/Gray911.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (greater trochanter) AnnotationAssertion(Annotation( ) "The greater trochanter (great trochanter) of the femur is a large, irregular, quadrilateral eminence and a part of the skeletal system. It is directed a little lateralward and backward, and, in the adult, is about 1 cm lower than the head. Because the pelvic outlet in the female is larger than in the male, there is a greater distance between the greater trochanters in the female. It has two surfaces and four borders. [WP,unvetted].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37594") AnnotationAssertion( "FMA:32852") AnnotationAssertion( "MA:0002822") AnnotationAssertion( "NCIT:C32698") AnnotationAssertion(Annotation( "ncithesaurus:Great_Trochanter") "UMLS:C0223865") AnnotationAssertion( "galen:GreaterTrochanter") AnnotationAssertion( "great trochanter") AnnotationAssertion( "greater trochanter of femur") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "trochanter major") AnnotationAssertion( "UBERON:0002503") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "greater trochanter") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/9/97/Gray243.png"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (lesser trochanter) AnnotationAssertion(Annotation( ) "The lesser trochanter (small trochanter) of the femur is a conical eminence, which varies in size in different subjects [WP,unvetted].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37595") AnnotationAssertion( "FMA:32853") AnnotationAssertion( "MA:0002823") AnnotationAssertion( "NCIT:C32982") AnnotationAssertion(Annotation( "ncithesaurus:Lesser_Trochanter") "UMLS:C0223866") AnnotationAssertion( "galen:LesserTrochanter") AnnotationAssertion( "lesser trochanter of femur") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "trochanter minor") AnnotationAssertion( "UBERON:0002504") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "lesser trochanter") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/8/8b/Gray341.png"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (spiral modiolar artery) AnnotationAssertion(Annotation( "MP:0004629") "The artery which parallels the spiral ganglion in the root of the spiral lamina of the modiolus, serving the ganglion and the cochlear duct and its contents.") AnnotationAssertion( ) AnnotationAssertion( "FMA:52312") AnnotationAssertion( "MA:0002824") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002505") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "spiral modiolar artery") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (iris epithelium) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An epithelium that is part of a iris [Automatically generated definition].") AnnotationAssertion( "EMAPA:35447") AnnotationAssertion( "FMA:58517") AnnotationAssertion( "MA:0002826") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelial tissue of iris") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelium of iris") AnnotationAssertion(Annotation( "FMA:58517") "epithelium pigmentosum (iris)") AnnotationAssertion(Annotation( "FMA:58517") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "epithelium pigmentosum iridis") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "iris epithelial tissue") AnnotationAssertion(Annotation( "FMA:58517") "iris epithelium") AnnotationAssertion(Annotation( "FMA:58517") "pigmented epithelium of iris") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "MA:0002826") "iris pigmented epithelium") AnnotationAssertion( "UBERON:0002506") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "iris epithelium") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ) SubClassOf(Annotation( "MA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (abdominal lymph node) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A lymph node that is part of an abdomen [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:35992") AnnotationAssertion( "FMA:12787") AnnotationAssertion( "MA:0002827") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "abdomen lymph node") AnnotationAssertion( "lymph node of abdomen") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:12787") "parietal abdominal lymph node") AnnotationAssertion( "UBERON:0002507") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "abdominal lymph node") SubClassOf( ) SubClassOf( ) # Class: (celiac lymph node) AnnotationAssertion(Annotation( "MGI:csmith"^^xsd:string) Annotation( "MP:0009626") "The visceral glands that are associated with the branches of the celiac artery, including the gastric, hepatic, and pancreaticolienal (splenic) lymph nodes.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:12792") AnnotationAssertion( "MA:0002828") AnnotationAssertion( "NCIT:C65166") AnnotationAssertion(Annotation( "ncithesaurus:Celiac_Lymph_Node") "UMLS:C0229766") AnnotationAssertion( "celiac node") AnnotationAssertion( "coeliac node") AnnotationAssertion( "nodus lymphaticus coeliacus") AnnotationAssertion( "terminal ventral aortic node") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:12792") "aJCC level 20 node") AnnotationAssertion(Annotation( "FMA:12792") "coeliac lymph node") AnnotationAssertion(Annotation( "FMA:12792") "jPS 9 node") AnnotationAssertion(Annotation( "FMA:12792") "jPS no. 9 node") AnnotationAssertion(Annotation( "FMA:12792") "no. 9 celiac lymph node") AnnotationAssertion( "UBERON:0002508") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "celiac lymph node") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/7/71/Gray613.png"^^xsd:anyURI) SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (mesenteric lymph node) AnnotationAssertion(Annotation( "MP:0005232") "The lymph nodes located in the mesentery, of which there are 3 classes: ileocolic, juxtaintestinal mesenteric, and central superior group.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0000767") AnnotationAssertion( "EMAPA:35561") AnnotationAssertion( "FMA:12795") AnnotationAssertion( "MA:0002829") AnnotationAssertion( "NCIT:C77641") AnnotationAssertion(Annotation( "ncithesaurus:Mesenteric_Lymph_Node") "UMLS:C0229792") AnnotationAssertion( "mesenteric node") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0000767") Annotation( ) "nodi lymphoidei mesenterici") AnnotationAssertion( "UBERON:0002509") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "mesenteric lymph node") SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (anterior fontanel) AnnotationAssertion(Annotation( ) "In humans, the anterior fontanelle (bregmatic fontanelle, frontal fontanelle) is the largest, and is placed at the junction of the sagittal suture, coronal suture, and frontal suture; it is lozenge-shaped, and measures about 4 cm in its antero-posterior and 2.5 cm in its transverse diameter. The fontanelle allows the skull to deform during birth to ease its passage through the birth canal and for expansion of the brain after birth. While the posterior and lateral fontanelles are obliterated by about six months after birth, the anterior is not completely closed until about the middle of the second year. Full ossification starts in the late twenties and finishes before the age of 50 . [WP,unvetted].") AnnotationAssertion(Annotation( "TAO") "TAO:0001739 anterior cranial fontanel is 'Fontanel that is located between the contralateral frontals and anterior to the epiphyseal bar'") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:19199") AnnotationAssertion( "FMA:75439") AnnotationAssertion( "MA:0002830") AnnotationAssertion(Annotation( "FMA:75439") "anterior fontanelle") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "bregmatic fontanelle") AnnotationAssertion(Annotation( ) Annotation( ) "fonticulus anterior") AnnotationAssertion(Annotation( ) "frontal fontanelle") AnnotationAssertion( "UBERON:0002510") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "anterior fontanel") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/b/b3/Gray197.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses(Annotation( "lexical"^^xsd:string) ) # Class: (trabecula carnea) AnnotationAssertion(Annotation( "MGI:monikat") Annotation( "MP:0004067") "The supporting bundles of muscular fibers lining the walls of the ventricles of the heart.") AnnotationAssertion(Annotation( "WP"^^xsd:string) "The purpose of the trabeculae carneae is most likely to prevent suction that would occur with a flat surfaced membrane and thus impair the heart's ability to pump efficiently. The trabeculae carneae also serve a similar function to papillary muscles in that their contraction pulls on the chordae tendineae, preventing inversion of the mitral (bicuspid) and tricuspid valves, that is, their bulging towards the atrial chambers, which would lead to subsequent leakage of the blood into the atria. So by the action of papillary muscles on the atrioventricular valves, backflow of the blood from the ventricles into the atria is prevented") AnnotationAssertion(Annotation( "MP") "Note that WP states they are ventricular, but MP has classes for atrial ventricular carnea.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:18626") AnnotationAssertion( "FMA:7269") AnnotationAssertion( "MA:0002831") AnnotationAssertion(Annotation( "MA:0002831") "ventricle trabecula carnea") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "GO:0060347") "cardiac trabecula") AnnotationAssertion(Annotation( ) Annotation( ) "columnae carneae") AnnotationAssertion(Annotation( "GO:0060347") "heart trabecula") AnnotationAssertion( "trabecula of heart") AnnotationAssertion(Annotation( ) "trabeculae carneae") AnnotationAssertion(Annotation( ) Annotation( ) "trabeculae carneae cordis") AnnotationAssertion(Annotation( "MA:0002831") "ventricular trabecula") AnnotationAssertion( "UBERON:0002511") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "trabecula carnea") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "WP"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (corpus luteum) AnnotationAssertion(Annotation( ) Annotation( ) "A transient endocrine gland that develops from the postovulatory or atretic follicles and secretes progesterone; it is thought to be related to egg retention[PMID].") AnnotationAssertion(Annotation( ) ) AnnotationAssertion(Annotation( ) "maintains the endometrium in mammals[WP]. A corpus luteum is known in hagfish (100), Squalus (101), and salamander (100) but not lamprey (102). There are no data for Branchiostoma and Ciona, and given that they are multiple spawners, there is no a priori reason to conclude that they lack a corpus luteum") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0000292") AnnotationAssertion( "CALOHA:TS-0181") AnnotationAssertion( "EMAPA:29886") AnnotationAssertion( "FMA:18619") AnnotationAssertion( "GAID:369") AnnotationAssertion( "MA:0002834") AnnotationAssertion( "MESH:D003338") AnnotationAssertion( "NCIT:C26465") AnnotationAssertion(Annotation( "ncithesaurus:Corpus_Luteum") "UMLS:C0010092") AnnotationAssertion(Annotation( ) "corpora lutea") AnnotationAssertion( "corpus luteum of ovary") AnnotationAssertion( "ovarian corpus luteum") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0000292") "luteal gland") AnnotationAssertion( "UBERON:0002512") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "corpus luteum") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/5/57/Folliclesinovary.jpg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "MA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (endochondral bone) AnnotationAssertion(Annotation( ) Annotation( ) Annotation( "GO:0001958") Annotation( "GO_REF:0000034"^^xsd:string) Annotation( "VSAO:0000145") "Replacement bone that forms within cartilage.") AnnotationAssertion( "placement in this class to be inferred") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "VSAO:0000145") Annotation( "VSAO"^^xsd:string) Annotation( "GO_REF:0000034, http://dx.plos.org/10.1371/journal.pone.0051070") Annotation( "PSPUB:0000170"^^xsd:string) "Replacement bone that forms within cartilage.[VSAO]") AnnotationAssertion(Annotation( "ZFA"^^xsd:string) "some structures, e.g. in ZFA are both intramembrane and endochondral") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010776") AnnotationAssertion( "AEO:0000083") AnnotationAssertion( "BTO:0002157") AnnotationAssertion( "EHDAA2:0003083") AnnotationAssertion( "FMA:24321") AnnotationAssertion( "TAO:0001591") AnnotationAssertion( "VSAO:0000145") AnnotationAssertion( "XAO:0004018") AnnotationAssertion( "ZFA:0001591") AnnotationAssertion(Annotation( "VSAO:0000145") "ossified chondrogenic bone") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0002157") "cartilaginous bone") AnnotationAssertion(Annotation( "ZFA:0001591") Annotation( ) "endochondral bones") AnnotationAssertion( "UBERON:0002513") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "endochondral bone") AnnotationAssertion(rdfs:seeAlso "https://github.com/obophenotype/uberon/wiki/Modeling-endochondral-elements-Design-Pattern"^^xsd:anyURI) AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/e/ee/Hypertrophic_Zone_of_Epiphyseal_Plate.jpg"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "VSAO"^^xsd:string) ) SubClassOf(Annotation( "VSAO"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (intramembranous bone) AnnotationAssertion(Annotation( ) Annotation( ) Annotation( "GO:0001957") "Bone tissue forms directly within mesenchyme, and does not replace other tissues[TAO]. Intramembranous ossification is the formation of bone in which osteoblasts secrete a collagen-proteoglycan matrix that binds calcium salts and becomes calcified[GO]. Intramembranous ossification is the way flat bones and the shell of a turtle are formed[GO]. Unlike endochondral ossification, cartilage is not present during intramembranous ossification[WP].") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0001644") Annotation( "TAO"^^xsd:string) Annotation( "TAO:wd"^^xsd:string) "Bone that forms directly within mesenchyme, and does not replace other tissues.[TAO]") AnnotationAssertion(Annotation( "2012-09-06"^^xsd:string) Annotation( "TAO:0001644") Annotation( "TAO"^^xsd:string) Annotation( "Curator"^^xsd:string) "[In TAO], This term was made obsolete because it is considered a synonym of membrane bone (VSAO:0000023).[TAO]") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:36615") AnnotationAssertion( "TAO:0001644") AnnotationAssertion( "ZFA:0001635") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "ZFA:0001635") Annotation( ) "intramembranous bones") AnnotationAssertion(Annotation( "AEO:0000085") "membrane bone") AnnotationAssertion( "UBERON:0002514") AnnotationAssertion(rdfs:label "intramembranous bone") SubClassOf(Annotation( "VSAO"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (periosteum) AnnotationAssertion(Annotation( "ISBN:0-683-40008-8"^^xsd:string) Annotation( "MP:0010971") "The thick fibrous membrane that closely invests the entire surface of a bone except the articular cartilage at synovial joints.") AnnotationAssertion( "periosteal") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0001022") AnnotationAssertion( "EMAPA:35681") AnnotationAssertion( "FMA:24041") AnnotationAssertion( "GAID:925") AnnotationAssertion( "MA:0002838") AnnotationAssertion( "MESH:D010521") AnnotationAssertion( "NCIT:C13184") AnnotationAssertion(Annotation( "ncithesaurus:Periosteum") "UMLS:C0031110") AnnotationAssertion( "galen:PeriOsteum") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002515") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "periosteum") AnnotationAssertion( "Bone:growth.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (epiphyseal plate) AnnotationAssertion(Annotation( ) "A hyaline cartilage plate in the metaphysis at each end of a long bone. The plate is found in children and adolescents; in adults, who have stopped growing, the plate is replaced by an epiphyseal line.") AnnotationAssertion( "consider splitting this class into the epiphyseal plates of long bones and vertebrae") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0000412") AnnotationAssertion( "EMAPA:35505") AnnotationAssertion( "FMA:75427") AnnotationAssertion( "GAID:191") AnnotationAssertion( "MA:0002839") AnnotationAssertion( "MESH:D006132") AnnotationAssertion( "epiphyseal growth plate") AnnotationAssertion( "epiphyseal growth plate cartilage") AnnotationAssertion(Annotation( "FMA:75427") "epiphysial plate") AnnotationAssertion(Annotation( "MA:0002839") "long bone epiphyseal plate") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0000412") "cartilago epiphysialis") AnnotationAssertion( "epiphyseal cartilage") AnnotationAssertion(Annotation( "BTO:0000412") "epiphyseal disk") AnnotationAssertion(Annotation( "BTO:0000412") "epiphyseal growth disk") AnnotationAssertion(Annotation( "MA:0002839") "growth plate") AnnotationAssertion(Annotation( ) Annotation( ) "lamina epiphysialis") AnnotationAssertion(Annotation( "BTO:0000412") "physis") AnnotationAssertion( "UBERON:0002516") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "epiphyseal plate") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/7/7a/Tib_fib_growth_plates.jpg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (basicranium) AnnotationAssertion(Annotation( ) "The base of skull is the most inferior area of the skull, composed of the endocranium and lower parts of the skull roof.") AnnotationAssertion( "basicranial") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:52801") AnnotationAssertion( "MA:0002840") AnnotationAssertion( "MESH:D019291") AnnotationAssertion( "MFMO:0000044") AnnotationAssertion( "NCIT:C12493") AnnotationAssertion(Annotation( "ncithesaurus:Base_of_the_Skull") "UMLS:C0149543") AnnotationAssertion( "base of cranium") AnnotationAssertion(Annotation( "FMA:52801") "base of skull") AnnotationAssertion(Annotation( ) Annotation( "FMA:52801") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "basis cranii") AnnotationAssertion(Annotation( "FMA:52801") Annotation( "MA:0002840") "cranial base") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002517") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "The skull base is formed from a series of cartilages either side of, and rostral to, the notochord, whose tip lies just caudal to the pituitary gland. It is closely associated with the sensory capsules, which partially or completely sur- round the olfactory epithelium, the eye, and the inner ear[PMID:11523816]") AnnotationAssertion(rdfs:label "basicranium") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/8/81/Gray193.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (otolith organ) AnnotationAssertion(Annotation( "ISBN:0-683-40008-8"^^xsd:string) Annotation( "MGI:llw2") Annotation( "MP:0002894") "The crystalline particles composed of calcium carbonate and a protein which adhere to the gelatinous membrane of the maculae of the utricle and saccule (otolithic membrane).") AnnotationAssertion( "Representation of utricle, sacule and otoliths in correspondence to other ontologies may require review. In EHDAA2, saccule and utricle are epithelia") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001676") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "PMID:11581521 Moorman SJ, Development of sensory systems in zebrafish (Danio rerio). ILAR Journal (2001), DOI:10.1016/S0378-5955(00)00168-4 Fay RR, Popper AN, Evolution of hearing in vertebrates: the inner ears and processing. Hearing research (2000)") "In fishes, as in other vertebrates, the vestibular end-organs are divided into a gravity receptor system, with three subdivisions and an angular acceleration receptor system. The gravity receptor system on each side consists of utricular, saccular, and lagenar maculae, each covered by an otolith (reference 1); (...)considerations have led to our rethinking issues related to the origin of several aspects of vertebrate hearing, and to the view that many basic auditory functions evolved very early in vertebrate history, and that the functions observed in more `advanced' vertebrates, such as birds and mammals, are frequently modifications of themes first encountered in fishes, and perhaps even more ancestral animals (reference 2).[well established][VHOG]") AnnotationAssertion( ) AnnotationAssertion( "EFO:0003539") AnnotationAssertion( "GAID:883") AnnotationAssertion( "MA:0002841") AnnotationAssertion( "MESH:D012444") AnnotationAssertion( "TAO:0000559") AnnotationAssertion( "VHOG:0001676") AnnotationAssertion( "ZFA:0000559") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "ZFA:0000559") "otolith organs") AnnotationAssertion(Annotation( "MESH:A09.246.631.909.625") "saccule and utricle") AnnotationAssertion(Annotation( "MESH:A09.246.631.909.625") "utricle and saccule") AnnotationAssertion( "UBERON:0002518") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "otolith organ") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/c/cb/Bigotolith.jpg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (otolithic part of statoconial membrane) AnnotationAssertion(Annotation( ) "The layer of the statoconial membrane that is composed of otoliths.") AnnotationAssertion(Annotation( "FMA:75573") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "membrana statoconiorum") AnnotationAssertion(Annotation( "MA:0002842") "otolithic membrane") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:75573") AnnotationAssertion( "GAID:884") AnnotationAssertion( "MA:0002842") AnnotationAssertion( "MESH:D010037") AnnotationAssertion(Annotation( "FMA:75573") "otolith layer of statoconial membrane") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002519") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "otolithic part of statoconial membrane") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (submandibular lymph node) AnnotationAssertion(Annotation( ) "The submandibular lymph nodes (submaxillary glands in older texts), three to six in number, are placed beneath the body of the mandible in the submaxillary triangle, and rest on the superficial surface of the submaxillary salivary gland. One gland, the middle gland of Stahr, which lies on the external maxillary artery as it turns over the mandible, is the most constant of the series; small lymph glands are sometimes found on the deep surface of the submaxillary salivary glands. The afferents of the submaxillary glands drain the medial palpebral commissure, the cheek, the side of the nose, the upper lip, the lateral part of the lower lip, the gums, and the anterior part of the margin of the tongue. Efferent vessels from the facial and submental glands also enter the submaxillary glands. Their efferent vessels pass to the superior deep cervical glands. [WP,unvetted].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0000769") AnnotationAssertion( "FMA:61224") AnnotationAssertion( "MA:0002843") AnnotationAssertion( "NCIT:C77650") AnnotationAssertion(Annotation( "ncithesaurus:Submandibular_Lymph_Node") "UMLS:C0229722") AnnotationAssertion( "submandibular node") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "mandibular lymph node") AnnotationAssertion(Annotation( "BTO:0000769") "nodi lymphoidei submandibulares") AnnotationAssertion( "UBERON:0002520") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "submandibular lymph node") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/4/4e/Illu_quiz_hn_03.jpg"^^xsd:anyURI) SubClassOf(Annotation( "CL:tm") ) # Class: (elastic tissue) AnnotationAssertion(Annotation( ) "Connective tissue composed of elastic fibers.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:20113") AnnotationAssertion( "GAID:926") AnnotationAssertion( "MA:0002853") AnnotationAssertion( "MESH:D004547") AnnotationAssertion( "NCIT:C32495") AnnotationAssertion( "elastic connective tissue") AnnotationAssertion(Annotation( ) "textus connectivus elasticus") AnnotationAssertion( "elastic fiber") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002521") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "elastic tissue") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/c/cb/Gray377.png"^^xsd:anyURI) SubClassOf( ) # Class: (tunica media) AnnotationAssertion(Annotation( ) "The middle layer of an artery or vein. [WP,unvetted].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0002011") AnnotationAssertion( "EMAPA:36298") AnnotationAssertion( "FMA:55590") AnnotationAssertion( "GAID:170") AnnotationAssertion( "MA:0002855") AnnotationAssertion( "MESH:D017540") AnnotationAssertion( "NCIT:C33821") AnnotationAssertion(Annotation( "ncithesaurus:Tunica_Media") "UMLS:C0162867") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "tunica media vasorum") AnnotationAssertion(Annotation( "BTO:0002011") "tunica media vasorum") AnnotationAssertion( "UBERON:0002522") AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "May be composed of smooth muscle and elastic tissue") AnnotationAssertion(rdfs:label "tunica media") AnnotationAssertion( "Illu:artery.jpg"^^xsd:anyURI) SubClassOf(Annotation( "MA"^^xsd:string) ) SubClassOf(Annotation( "cjm"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "cjm"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (tunica intima) AnnotationAssertion(Annotation( ) Annotation( "ISBN:0073040584"^^xsd:string) Annotation( "NCIT:C33820") "The innermost layer of a blood vessel which is a lining of endothelial cells facing the lumen[Kardong].") AnnotationAssertion( "the FMA class represents a more generic layer which is the superclass of the layer found in both blood vessels and lymph vessels (and also endocardium) - we should probably follow this structure") AnnotationAssertion( "the FMA class represents a structure which may have both epithelium and fibroelastic connective tissue as parts") AnnotationAssertion(Annotation( "Wikipedia") Annotation( ) "The tunica intima (or just intima) is the innermost layer of an artery or vein. It is made up of one layer of endothelial cells and is supported by an internal elastic lamina. The endothelial cells are in direct contact with the blood flow. The inner coat (tunica intima) can be separated from the middle by a little maceration, or it may be stripped off in small pieces; but, on account of its friability, it cannot be separated as a complete membrane. It is a fine, transparent, colorless structure which is highly elastic, and, after death, is commonly corrugated into longitudinal wrinkles. The inner coat consists of: A layer of pavement endothelium, the cells of which are polygonal, oval, or fusiform, and have very distinct round or oval nuclei. This endothelium is brought into view most distinctly by staining with silver nitrate. A subendothelial layer, consisting of delicate connective tissue with branched cells lying in the interspaces of the tissue; in arteries of less than 2 mm. in diameter the subendothelial layer consists of a single stratum of stellate cells, and the connective tissue is only largely developed in vessels of a considerable size. An elastic or fenestrated layer, which consists of a membrane containing a net-work of elastic fibers, having principally a longitudinal direction, and in which, under the microscope, small elongated apertures or perforations may be seen, giving it a fenestrated appearance. It was therefore called by Henle the fenestrated membrane. This membrane forms the chief thickness of the inner coat, and can be separated into several layers, some of which present the appearance of a network of longitudinal elastic fibers, and others a more membranous character, marked by pale lines having a longitudinal direction. In minute arteries the fenestrated membrane is a very thin layer; but in the larger arteries, and especially in the aorta, it has a very considerable thickness. [WP,unvetted].[Wikipedia]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0002012") AnnotationAssertion( "EMAPA:36297") AnnotationAssertion( "FMA:55589") AnnotationAssertion( "GAID:523") AnnotationAssertion( "MA:0002861") AnnotationAssertion( "MESH:D017539") AnnotationAssertion( "NCIT:C33820") AnnotationAssertion(Annotation( "ncithesaurus:Tunica_Intima") "UMLS:C0162864") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0002012") "Bichat's tunic") AnnotationAssertion(Annotation( "BTO:0002012") "intima") AnnotationAssertion(Annotation( "BTO:0002012") "tunica intima vasorum") AnnotationAssertion( "UBERON:0002523") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "tunica intima") AnnotationAssertion( "Illu:artery.jpg"^^xsd:anyURI) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "check for exceptions, e.g. capillaries") ObjectSomeValuesFrom( )) SubClassOf(Annotation( "ISBN:0073040584"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (mediastinal lymph node) AnnotationAssertion(Annotation( ) Annotation( "OBOL:automatic"^^xsd:string) "A lymph node that is part of a mediastinum. Each consists of several lymph node groups, especially along the trachea (5 groups), along the esophagus and between the lung and the diaphragm. In the mediastinal lymph nodes arises lymphatic ducts, which draines the lymph to the left subclavian vein (to the venous angle in the confluence of the subclavian and deep jugular veins). The mediastinal lymph nodes along the esophagus are in tight connection with the abdominal lymph nodes along the esophagus and the stomach. That fact facilitates spreading of tumors cells through these lymphatics in cases of cancers of the stomach and particularly of the esophagus. Through the mediastinum, the main lymphatic drainage from the abdominal organs goes via the thoracic duct (ductus thoracicus), which drains majority of the lymph from the abdomen to the above mentioned left venous angle.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EFO:0001670") AnnotationAssertion( "EMAPA:35555") AnnotationAssertion( "FMA:12774") AnnotationAssertion( "MA:0002877") AnnotationAssertion( "NCIT:C33073") AnnotationAssertion(Annotation( "ncithesaurus:Mediastinal_Lymph_Node") "UMLS:C0588055") AnnotationAssertion( "mediastinal node") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002524") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "mediastinal lymph node") SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (brachial lymph node) AnnotationAssertion(Annotation( ) Annotation( "MP:0005231") "The lymph nodes located along the brachial vein that receive drainage from most of the free upper limb and send efferent vessels to the central axillary lymph nodes.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:44314") AnnotationAssertion( "MA:0002878") AnnotationAssertion( "NCIT:C92221") AnnotationAssertion(Annotation( "ncithesaurus:Brachial_Lymph_Node") "UMLS:C0229840") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "nodi lymphoidei brachiales") AnnotationAssertion( "UBERON:0002525") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "brachial lymph node") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/7/73/Gray607.png"^^xsd:anyURI) SubClassOf( ) # Class: (lumbar lymph node) AnnotationAssertion(Annotation( ) "The lumbar lymph nodes (paraaortic nodes) are a group of lymph nodes residing in the lumbar region. They consist of the following groups: right and left lateral aortic lymph nodes preaortic lymph nodes retroaortic lymph nodes (or 'postaortic').") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:84599") AnnotationAssertion( "MA:0002879") AnnotationAssertion( "NCIT:C118775") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:84599") "aortocaval lymph node") AnnotationAssertion(Annotation( "FMA:84599") "aortocaval node") AnnotationAssertion(Annotation( "FMA:84599") "area 16 lymph node") AnnotationAssertion(Annotation( "FMA:84599") "jPS 16 node") AnnotationAssertion(Annotation( "FMA:84599") "jPS no. 16 node") AnnotationAssertion(Annotation( ) "lumbar glands") AnnotationAssertion(Annotation( "FMA:84599") "lumbo-aortic lymph node") AnnotationAssertion(Annotation( "FMA:84599") "para-aortic lumbar lymph node") AnnotationAssertion(Annotation( "FMA:84599") "parietal para-aortic lymph node") AnnotationAssertion( "UBERON:0002526") AnnotationAssertion(rdfs:label "lumbar lymph node") SubClassOf( ) # Class: (pancreatic lymph node) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A lymph node that is part of a pancreas [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:16626") AnnotationAssertion( "MA:0002881") AnnotationAssertion( "NCIT:C77642") AnnotationAssertion(Annotation( "ncithesaurus:Pancreatic_Lymph_Node") "UMLS:C0229783") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "lymph node of pancreas") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "pancreas lymph node") AnnotationAssertion( "pancreatic node") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:16626") "aJCC level 19 node") AnnotationAssertion(Annotation( "MA:0002881") Annotation( ) "pyloric lymph node") AnnotationAssertion( "UBERON:0002527") AnnotationAssertion(rdfs:label "pancreatic lymph node") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (sacral lymph node) AnnotationAssertion(Annotation( "ncithesaurus:Sacral_Lymph_Node") "A lymph node located in the sacral region.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:16655") AnnotationAssertion( "MA:0002883") AnnotationAssertion( "NCIT:C77647") AnnotationAssertion(Annotation( "ncithesaurus:Sacral_Lymph_Node") "UMLS:C0229827") AnnotationAssertion( "sacral node") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002528") AnnotationAssertion(rdfs:label "sacral lymph node") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (limb segment) AnnotationAssertion(Annotation( ) "A major subdivision of a mature or developing limb, including both skeletal elements (or the mesenchyme that gives rise to the skeletal elements) and associated tissues, such as muscle, connective tissue, integument. Examples: autopod region, zeugopod region, stylopod region, metapodial region, arm region. Excludes the limb girdles.") AnnotationAssertion( "TODO - align this with the CARO2 class 'appendage segment'; note the FMA class does not appear to require repetition") AnnotationAssertion(Annotation( "FMA"^^xsd:string) "FMA has both limb segment and free limb segment, the former includes the girdles. Note that MA uses the term more generally and includes A,S,Z,S+Z(arm/leg), whereas FMA is just A,S,Z") AnnotationAssertion( ) AnnotationAssertion( "FMA:241863") AnnotationAssertion( "MA:0002889") AnnotationAssertion( "NCIT:C38630") AnnotationAssertion(Annotation( "ncithesaurus:Extremity_Part") "UMLS:C1268195") AnnotationAssertion(Annotation( "FMA:241863") "free limb segment") AnnotationAssertion( "segment of limb") AnnotationAssertion( "subdivision of limb") AnnotationAssertion( "uberon") AnnotationAssertion( "extremity part") AnnotationAssertion( "limb region") AnnotationAssertion( "region of limb") AnnotationAssertion( "UBERON:0002529") AnnotationAssertion(rdfs:label "limb segment") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses( ) # Class: (gland) AnnotationAssertion(Annotation( "MGI:csmith"^^xsd:string) Annotation( "MP:0002163") "An organ that functions as a secretory or excretory organ.") AnnotationAssertion( "glandular") AnnotationAssertion( "UBERON:MIAA_0000021") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0000212") AnnotationAssertion( "AEO:0000096") AnnotationAssertion( "BTO:0000522") AnnotationAssertion( "EFO:0000797") AnnotationAssertion( "EHDAA2:0003096") AnnotationAssertion( "EHDAA:2161") AnnotationAssertion( "EHDAA:4475") AnnotationAssertion( "EHDAA:6522") AnnotationAssertion( "EMAPA:18425") AnnotationAssertion( "FBbt:00100317") AnnotationAssertion( "FMA:7146") AnnotationAssertion( "FMA:86294") AnnotationAssertion( "HAO:0000375") AnnotationAssertion( "MA:0003038") AnnotationAssertion( "MAT:0000021") AnnotationAssertion( "MIAA:0000021") AnnotationAssertion( "NCIT:C13319") AnnotationAssertion( "OpenCyc:Mx4rwP3vyJwpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Gland") "UMLS:C1285092") AnnotationAssertion( "WikipediaCategory:Glands") AnnotationAssertion( "galen:Gland") AnnotationAssertion(Annotation( ) "glandular organ") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0000522") "Druese") AnnotationAssertion(Annotation( ) Annotation( ) "glandula") AnnotationAssertion(Annotation( "BTO:0000522") "glandula") AnnotationAssertion( "UBERON:0002530") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "gland") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/a/a1/Gray1026.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses( ) # Class: (epiblast (generic)) AnnotationAssertion(Annotation( ) Annotation( "ZFIN:curator"^^xsd:string) "In amniote animal embryology, the epiblast is a tissue type derived either from the inner cell mass in mammals or the blastodisc in birds and reptiles. It lies above the hypoblast. In mammalian embryogenesis, the columnar cells of the epiblast are adjacent to the trophoblast, while the cuboidal cells of the hypoblast are closer to the blastocoele. The epiblast, whilst referred to as the primary ectoderm, differentiates to form all three layers of the trilaminar germ disc in a process called gastrulation[WP]. The outer of the two layers of the blastoderm that form during gastrulation, corresponding to primitive ectoderm during gastrulation and to the definitive ectoderm after gastrulation[ZFA].") AnnotationAssertion( "MP says - tissue that gives rise to the ectoderm, endoderm and mesoderm of the embryo proper. In HOG, epiblast is part of primitive streak/blastpore, which is inconsistent with the MP definition of primitive streak as a ridge of the epiblast. Note that these terms, epiblast and hypoblast, are also used to describe layers of the avian embryonic blastoderm, but the layers so-named seem to be altogether different in these two kinds of vertebrate embryos(CVS). Consider obsoleting this as a grouping class") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000243") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "DOI:10.1146/annurev.cellbio.042308.113344 Zorn AM, Wells JM, Vertebrate endoderm development and organ formation. Annual Review of Cell Developmental Biology (2009)") "In pregastrula zebrafish embryos, the epiblast is an inverted cup of cells that sits on top of a large yolk cell. (...) In amniote embryos (mammals and birds), gastrulation initiates in an epithelial layer called the epiblast. Cells in the epiblast undergo an epithelial to mesenchymal transition (EMT), migrate through the primitive streak (PS), and incorporate in the middle (mesoderm) or outer (endoderm) layer. The presumptive definitive endoderm (DE) cells invade and displace an outer layer of extraembryonic tissue cells, the hypoblast in chick and the visceral endoderm (VE) in mouse, which form supporting structures such as the yolk sac.[uncertain][VHOG]") AnnotationAssertion( ) AnnotationAssertion( "BTO:0004593") AnnotationAssertion( "FMA:296704") AnnotationAssertion( "MAT:0000067") AnnotationAssertion( "MIAA:0000067") AnnotationAssertion( "VHOG:0000243") AnnotationAssertion(Annotation( "VHOG:0000243") "epiblast") AnnotationAssertion( "uberon") AnnotationAssertion( "blastocyst") AnnotationAssertion(Annotation( "MP:0003886") "ectoblast") AnnotationAssertion(Annotation( ) Annotation( ) "epiblastus") AnnotationAssertion(Annotation( "VHOG:0000243") "primitive ectoderm") AnnotationAssertion( "UBERON:0002532") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "epiblast (generic)") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/e/e3/Gray21.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (hermaphrodite gonad) AnnotationAssertion(Annotation( ) "A gonad with both testicular and ovarian aspects[WP].") AnnotationAssertion( ) AnnotationAssertion( "BTO:0000981") AnnotationAssertion( "EFO:0000971") AnnotationAssertion( "MAT:0000165") AnnotationAssertion( "MIAA:0000165") AnnotationAssertion( "WBbt:0005178") AnnotationAssertion(Annotation( "GO:0040035") "hermaphrodite genitalia") AnnotationAssertion(Annotation( ) Annotation( ) "glandula hermaphroditica") AnnotationAssertion(Annotation( ) Annotation( ) "hermaphrodite gland") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0000981") "ovotestis") AnnotationAssertion( "UBERON:0002537") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "hermaphrodite gonad") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (hatching gland) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "The cells of the hatching gland contain enzymes responsible for solubilization of the egg chorion, facilitating the hatching process[GO]. A transversely oriented set of cells located deep to the EVL on the pericardial membrane, especially prominent during pharyngula period because of the brightly refractile cytoplasmic granules (containing hatching enzymes) of the principal cells of the gland.") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0000026") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "A transversely oriented set of cells located deep to the EVL on the pericardial membrane, especially prominent during pharyngula period because of the brightly refractile cytoplasmic granules (containing hatching enzymes) of the principal cells of the gland. Kimmel et al, 1995.[TAO]") AnnotationAssertion( "AAO:0011050") AnnotationAssertion( "BTO:0000558") AnnotationAssertion( "EFO:0000863") AnnotationAssertion( "MAT:0000180") AnnotationAssertion( "MIAA:0000180") AnnotationAssertion( "TAO:0000026") AnnotationAssertion( "VHOG:0000078") AnnotationAssertion( "XAO:0000034") AnnotationAssertion( "ZFA:0000026") AnnotationAssertion( "uberon") AnnotationAssertion( "frontal gland") AnnotationAssertion( "hgg") AnnotationAssertion( "UBERON:0002538") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "hatching gland") SubClassOf(Annotation( "GO"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pharyngeal arch) AnnotationAssertion(Annotation( ) Annotation( ) Annotation( "ZFA:yb") "One of a series of paired bulges that develop along the lateral walls of the foregut. The pharyngeal arches have developmental contributions from endoderm, mesoderm, and neural crest cells and are separated by anterior lateral endoderm out-pockets known as pharyngeal pouches.") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0010359") Annotation( "AAO"^^xsd:string) Annotation( "NLM:branchial+arch") "One of a series of bony or cartilaginous arches that develop in the walls of the mouth cavity and pharynx of the embryo.[AAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000155") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "DOI:10.1111/j.1469-7580.2005.00472.x Graham A, Okabe M and Quinlan R, The role of the endoderm in the development and evolution of the pharyngeal arches. J Anat (2005)") "A conserved feature of all vertebrate embryos is the presence of a series of bulges on the lateral surface of the head, the pharyngeal arches; it is within these structures that the nerves, muscles and skeletal components of the pharyngeal apparatus are laid down.[well established][VHOG]") AnnotationAssertion( "Numbered cranial to caudal. different in mammals. branchial arch = ZFA:0001613 pharyngeal arch 3-7. generally gill arch 1 = pharyngeal arch 3. terminology varies as to whether branchial arch follows gill or pharyngeal numbering") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010359") AnnotationAssertion( "BTO:0001785") AnnotationAssertion( "EFO:0000959") AnnotationAssertion( "EHDAA:571") AnnotationAssertion( "EMAPA:16117") AnnotationAssertion( "FMA:293015") AnnotationAssertion( "GAID:1292") AnnotationAssertion( "MAT:0000242") AnnotationAssertion( "MESH:A16.254.160") AnnotationAssertion( "MIAA:0000242") AnnotationAssertion( "NCIT:C34249") AnnotationAssertion( "TAO:0001306") AnnotationAssertion(Annotation( "ncithesaurus:Pharyngeal_Arch") "UMLS:C0080322") AnnotationAssertion( "VHOG:0000155") AnnotationAssertion( "XAO:0000096") AnnotationAssertion( "ZFA:0001306") AnnotationAssertion(Annotation( ) "pharyngeal arches") AnnotationAssertion(Annotation( "BTO:0001785") Annotation( "MP:0002884") "branchial arch") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "arcus pharyngei") AnnotationAssertion( "visceral arch") AnnotationAssertion( "UBERON:0002539") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "pharyngeal arch") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/8/8b/Gray41.png"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (germ ring) AnnotationAssertion(Annotation( ) "The thickend rim of the blastoderm evident during late blastula and gastrula stages[FishBase]. Embryonic structure which is a uniform thickened annulus at the blastoderm margin, consisting of two layers in addition to the EVL, the epiblast and the hypoblast. The germ ring is formed by the involution of the blastoderm back upon itself[ZFA].") AnnotationAssertion( "TODO - check timing of appearance and disappearance - check relationship with primitive streak. he blastopore lips in amphibians appear to have the equivalent function of the germ ring in zebrafish (ES)") AnnotationAssertion( ) AnnotationAssertion(Annotation( "ZFIN:ZDB-PUB-961014-576") "Embryonic structure that forms as a thickened annulus at the blastoderm rim. The germ ring is thickened because it is the involuting margin of the blastoderm[ZFIN:ZDB-PUB-961014-576].") AnnotationAssertion( "AAO:0000211") AnnotationAssertion( "EFO:0003427") AnnotationAssertion( "MAT:0000255") AnnotationAssertion( "MIAA:0000255") AnnotationAssertion( "TAO:0000111") AnnotationAssertion( "ZFA:0000111") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002541") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "germ ring") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete median fin skeleton) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Postcranial axial skeleton that is unpaired and located on the sagittal plane of the organism.") AnnotationAssertion( "EFO:0000950") AnnotationAssertion( "MAT:0000277") AnnotationAssertion( "MIAA:0000277") AnnotationAssertion( "ZFA:0001123") AnnotationAssertion(Annotation( "TAO:0001123") "axial fin skeleton") AnnotationAssertion(Annotation( "ZFA:0001123") "unpaired fin skeleton") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002543") AnnotationAssertion(rdfs:comment "Mistakenly placed in uberon, should remain domain of TAO for now") AnnotationAssertion(rdfs:label "obsolete median fin skeleton") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (digit) AnnotationAssertion(Annotation( ) Annotation( ) "A subdivision of the autopod that has as part a series of phalanges together with associated vasculature, musculature, integument and nerves. It is continuous with the metapodial subdivision of the autopod, but does not include the metapodials. In species such as humans, fully formed digits are distinct, whereas in other species the digits may be connected by interdigital webbing, or may be completely unseparated (for example, in cetaceans).") AnnotationAssertion( "this class represents the entire organism subdivision encompassing soft tissue as well as the underlying skeletal framework. The class represents the phalangeal part only - historically the term 'digit' has also been used to represent the unit consisting of a series of phalanges together with a metapodial bone. We may in future relabel this class to avoid confusion with this concept, but the class will continue to represent the phalangeal portion") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000944") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "DOI:10.1038/nature07339 Boisvert CA, Mark-Kurik E and Ahlberg PE, The pectoral fin of Panderichthys and the origin of digits. Nature (2008)") "Our reinterpretation of the distal fin endoskeleton of Panderichthys removes the final piece of evidence supporting the formerly popular hypothesis that tetrapod digits are wholly new structures without homologues in sarcopterygian fish fins. This hypothesis, which was based partly on the complete absence of plausible digit homologues in Panderichthys (then the closest known relative of tetrapods), has already been called into question by the discovery of digit-like radials in Tiktaalik and the fact that Hox gene expression patterns closely resembling those associated with digit formation in tetrapods occur in the distal fin skeletons of paddlefish and Australian lungfish. Our new data show that Panderichthys is not an anomaly: like Tiktaalik and other fish members of the Tetrapodomorpha, it has distal radials that can be interpreted as digit homologues.[well established][VHOG]") AnnotationAssertion( "digital") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0011126") AnnotationAssertion( "EFO:0000881") AnnotationAssertion( "EMAPA:32725") AnnotationAssertion(Annotation( "GAT") "FMA:85518") AnnotationAssertion( "MA:0000690") AnnotationAssertion( "MAT:0000285") AnnotationAssertion( "MIAA:0000285") AnnotationAssertion( "NCIT:C40186") AnnotationAssertion( "OpenCyc:Mx4rvzLD_ZwpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Digit") "UMLS:C0582802") AnnotationAssertion( "VHOG:0000944") AnnotationAssertion( "XAO:0003032") AnnotationAssertion( "galen:Digit") AnnotationAssertion( "acropodial unit") AnnotationAssertion(Annotation( ) Annotation( ) "digit (phalangeal portion) plus soft tissue") AnnotationAssertion(Annotation( "MA:0000690") "limb digit") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002544") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "digit") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses( ) DisjointClasses( ) # Class: (obsolete body ganglion) AnnotationAssertion( "WBbt:0005332") AnnotationAssertion( "EFO:0000901") AnnotationAssertion( "MAT:0000344") AnnotationAssertion( "MIAA:0000344") AnnotationAssertion( "uberon") AnnotationAssertion( "trunk ganglion") AnnotationAssertion( "UBERON:0002545") AnnotationAssertion(rdfs:label "obsolete body ganglion") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (cranial placode) AnnotationAssertion(Annotation( ) Annotation( ) Annotation( ) Annotation( ) Annotation( ) "Ectodermal placode that develops in the head into a part of the sensory nervous system. With a few exceptions (lens, adenohypophyseal), cranial placodes are neurogenic.") AnnotationAssertion( "Do not merge with neurogenic placode") AnnotationAssertion(Annotation( ) "Comparisons of developmental gene expression suggest that the anterior ectoderm in amphioxus may be homologous to the vertebrate olfactory placode, the only vertebrate placode with primary, not secondary, neurons") AnnotationAssertion( "The term placode or placodes also applies to developing organs such as teeth, mammary glands, hair follicles, feathers and scales. We include a separate parent class for this. to avoid confusion, we include neurogenic placode as a subclass") AnnotationAssertion(Annotation( ) Annotation( "FMA:293966") Annotation( ) "ectodermal placode") AnnotationAssertion(Annotation( ) "placode") AnnotationAssertion( "AAO:0010466") AnnotationAssertion( "EFO:0001650") AnnotationAssertion( "FMA:293966") AnnotationAssertion( "MAT:0000369") AnnotationAssertion( "MIAA:0000369") AnnotationAssertion( "XAO:0000305") AnnotationAssertion(Annotation( "UBERON:cjm"^^xsd:string) "ectodermal cranial placode") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "XAO:0000305") Annotation( ) "cranial placodes") AnnotationAssertion( "UBERON:0002546") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "cranial placode") SubClassOf(Annotation( "cjm"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (larva) AnnotationAssertion(Annotation( ) "A distinct juvenile form many animals undergo before metamorphosis into adults. Animals with indirect development such as insects, amphibians, or cnidarians typically have a larval phase of their life cycle.") AnnotationAssertion( "TODO discriminate between stages and organisms") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0002048") Annotation( "TAO"^^xsd:string) Annotation( "TAO:wd"^^xsd:string) "Whole organism that is premetamorphic or a very immature individual.[TAO]") AnnotationAssertion( "larval") AnnotationAssertion( ) AnnotationAssertion( "AEO:0000126") AnnotationAssertion( "BTO:0000707") AnnotationAssertion( "FBbt:00001727") AnnotationAssertion( "HAO:0000459") AnnotationAssertion( "OpenCyc:Mx4rwQCBvZwpEbGdrcN5Y29ycA") AnnotationAssertion( "TAO:0002048") AnnotationAssertion(Annotation( "TAO:0002048") "larval organism") AnnotationAssertion(Annotation( ) "ammocoete") AnnotationAssertion(Annotation( ) "bipinnaria") AnnotationAssertion(Annotation( ) "caterpillar") AnnotationAssertion(Annotation( ) "glochidium") AnnotationAssertion(Annotation( ) "grub") AnnotationAssertion(Annotation( ) "leptocephalus") AnnotationAssertion(Annotation( ) "maggot") AnnotationAssertion(Annotation( ) "naiad") AnnotationAssertion(Annotation( ) "nymph") AnnotationAssertion(Annotation( ) "planula") AnnotationAssertion(Annotation( ) "tadpole") AnnotationAssertion(Annotation( ) "trochophore") AnnotationAssertion(Annotation( ) "veliger") AnnotationAssertion(Annotation( ) "wriggler") AnnotationAssertion(Annotation( ) "zoea") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002548") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "larva") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (ventral trigeminal tract) AnnotationAssertion(Annotation( ) "The Anterior trigeminothalamic tract (or ventral trigeminothalamic tract) serves as pain, temperature, and light touch pathway from the face, head and neck. It receives input from trigeminal nerve, facial nerve, glossopharyngeal nerve and vagus nerve. It receives discriminative tactile and pressure input from the contralateral principal sensory nucleus of CN V, which terminates in the ventral posteromedial nucleus of the thalamus. It then ascends to the contralateral sensory cortex via three neurons .") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:v5") AnnotationAssertion( "BIRNLEX:1001") AnnotationAssertion( "DHBA:12803") AnnotationAssertion( "FMA:72506") AnnotationAssertion(Annotation( "BIRNLEX:1001") "UMLS:C0175460") AnnotationAssertion(Annotation( "BIRNLEX:1001") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=613") AnnotationAssertion(Annotation( "FMA:72506") "anterior trigeminothalamic tract") AnnotationAssertion(Annotation( "FMA:72506") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "tractus trigeminothalamicus anterior") AnnotationAssertion(Annotation( "FMA:72506") "trigeminal lemniscus-2") AnnotationAssertion(Annotation( "FMA:72506") "ventral crossed tract") AnnotationAssertion( "ventral secondary ascending tract of V") AnnotationAssertion(Annotation( "FMA:72506") "ventral trigeminal pathway") AnnotationAssertion(Annotation( "FMA:72506") "ventral trigeminothalamic tract") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:613") Annotation( ) "tractus trigeminalis ventralis") AnnotationAssertion(Annotation( ) Annotation( ) "tractus trigeminothalamicus anterior") AnnotationAssertion(Annotation( "NeuroNames:613") "ventral secondary ascending tract of V") AnnotationAssertion(Annotation( ) "ventral trigeminal tract") AnnotationAssertion(Annotation( ) "ventral trigeminothalamic tract") AnnotationAssertion( "UBERON:0002549") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "ventral trigeminal tract") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) DisjointClasses(Annotation( "lexical"^^xsd:string) ) # Class: (anterior hypothalamic region) AnnotationAssertion(Annotation( "BIRNLEX:1005") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "AHR") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:AHR") AnnotationAssertion( "BIRNLEX:1005") AnnotationAssertion( "DHBA:266441551") AnnotationAssertion( "FMA:62027") AnnotationAssertion( "HBA:12902") AnnotationAssertion( "HBA:4570") AnnotationAssertion( "MESH:A08.186.211.730.385.357.342") AnnotationAssertion(Annotation( "BIRNLEX:1005") "UMLS:C0020653") AnnotationAssertion(Annotation( "BIRNLEX:1005") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=376") AnnotationAssertion(Annotation( "DHBA:266441551") "anterior hypothalamic area") AnnotationAssertion(Annotation( "FMA:62027") "chiasmal zone") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:376") "preoptic division") AnnotationAssertion( "UBERON:0002550") AnnotationAssertion(rdfs:label "anterior hypothalamic region") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses(Annotation( "lexical"^^xsd:string) ) DisjointClasses(Annotation( "lexical"^^xsd:string) ) # Class: (interstitial nucleus of Cajal) AnnotationAssertion(Annotation( ) "The largest and most prominent of the cell groups of the medial longitudinal fasciculus.") AnnotationAssertion(Annotation( "BIRNLEX:1008") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "ICjl") AnnotationAssertion(Annotation( "FMA:72432") "interstitial nucleus") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:ICA") AnnotationAssertion( "BAMS:ICjl") AnnotationAssertion( "BAMS:IMLF") AnnotationAssertion( "BAMS:INC") AnnotationAssertion( "BAMS:InC") AnnotationAssertion( "BIRNLEX:1008") AnnotationAssertion( "BM:MB-ICA") AnnotationAssertion( "DHBA:12278") AnnotationAssertion( "FMA:72432") AnnotationAssertion( "HBA:9015") AnnotationAssertion( "MBA:67") AnnotationAssertion(Annotation( "BIRNLEX:1008") "UMLS:C0228418") AnnotationAssertion(Annotation( "BIRNLEX:1008") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=515") AnnotationAssertion(Annotation( ) "NIC") AnnotationAssertion(Annotation( "FMA:72432") "interstitial nucleus of medial longitudinal fasciculus") AnnotationAssertion( "interstitial nucleus of medial longitudinal fasciculus (Crosby)") AnnotationAssertion(Annotation( "FMA:72432") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "nucleus interstitialis") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BAMS:INC") "interstitial nucleus of Cajal") AnnotationAssertion(Annotation( "NeuroNames:515") "interstitial nucleus of the medial longitudinal fascicle (Boyce 1895)") AnnotationAssertion(Annotation( "BAMS:IMLF") "interstitial nucleus of the medial longitudinal fasciculus") AnnotationAssertion(Annotation( "NeuroNames:515") Annotation( ) "nucleus interstitialis Cajal") AnnotationAssertion(Annotation( "NeuroNames:515") "nucleus of the posterior commissure (Kvlliker)") AnnotationAssertion( "UBERON:0002551") AnnotationAssertion(rdfs:label "interstitial nucleus of Cajal") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (vestibulocerebellar tract) AnnotationAssertion(Annotation( "BIRNLEX:1009") "White matter tract containing axons arising in the vestibular ganglion primarily projecting to the ipsilateral cerebellum via the inferior cerebellar peduncle (Heimer, L. The Human Brain, 2nd ed., 1995, pg 370).") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:vcb") AnnotationAssertion( "BIRNLEX:1009") AnnotationAssertion( "DHBA:12754") AnnotationAssertion( "FMA:72508") AnnotationAssertion(Annotation( "BIRNLEX:1009") "UMLS:C0175462") AnnotationAssertion(Annotation( "BIRNLEX:1009") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=615") AnnotationAssertion(Annotation( "FMA:72508") "vestibulocerebellar fibers") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:615") Annotation( ) "tractus vestibulocerebelli") AnnotationAssertion( "UBERON:0002552") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "vestibulocerebellar tract") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (anatomical cavity) AnnotationAssertion(Annotation( "FMA:67552") "Anatomical space which contains portions of one or more body substances and is bounded by the internal surface of one maximally connected anatomical structure. Examples: cranial cavity, pharyngeal recess space, nasal cavity, tooth socket, cavity of serous sac, lumen of stomach, lumen of artery, fornix of vagina.") AnnotationAssertion( "cavity") AnnotationAssertion( "BIRNLEX:1011") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37442") AnnotationAssertion( "FMA:67552") AnnotationAssertion( "MA:0002447") AnnotationAssertion( "NCIT:C34007") AnnotationAssertion( "galen:Cavity") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002553") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "anatomical cavity") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete regional part of superior colliculus) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A multi-tissue structure that is part of a superior colliculus.") AnnotationAssertion( "BIRNLEX:1014") AnnotationAssertion( "FMA:85592") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:85592") "segment of superior colliculus") AnnotationAssertion(Annotation( "FMA:85592") "superior colliculus segment") AnnotationAssertion( "UBERON:0002554") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "obsolete regional part of superior colliculus") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (intermediate hypothalamic region) AnnotationAssertion(Annotation( ) "The portion of the hypothalamus located generally internal to the region of the infundibulum.") AnnotationAssertion( "See notes for pars intermedia of adenohypophysis.") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0006000") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:ZDB-PUB-001018-1") Annotation( "ZFIN:ZDB-PUB-020730-6") Annotation( "ZFIN:ZDB-PUB-081114-19") "Brain structure that lies perpendicular to the longitudinal axis of the embryonic neural tube, is continuous with the rostral hypothalamic proliferation and whose most lateral extent is deflected dorsally within the inferior lobe.[TAO]") AnnotationAssertion(Annotation( "TA") "In humans it contains the following nuclei: dorsal nucleus [TA] (nucleus dorsalis hypothalami [TA]), parts of the dorsomedial nucleus [TA] (nucleus dorsomedialis [TA]), arcuate nucleus [TA] (nucleus arcuatus [TA]), posterior periventricular nucleus [TA] (nucleus periventricularis posterior [TA]), retrochiasmatic area [TA] (area retrochiasmatica [TA]), lateral tuberal nuclei [TA] (nuclei tuberales laterales [TA]), and ventromedial nucleus [TA] (nucleus ventromedialis hypothalami") AnnotationAssertion(Annotation( "BIRNLEX:1015") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "IHR") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:IHR") AnnotationAssertion( "BIRNLEX:1015") AnnotationAssertion( "FMA:62028") AnnotationAssertion( "MESH:A08.186.211.730.385.357.352") AnnotationAssertion( "TAO:0006000") AnnotationAssertion(Annotation( "BIRNLEX:1015") "UMLS:C0020669") AnnotationAssertion(Annotation( "BIRNLEX:1015") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=392") AnnotationAssertion(Annotation( "FMA:62028") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "area hypothalamica intermedia") AnnotationAssertion(Annotation( "FMA:62028") "intermediate hypothalamic area") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "TAO:0006000") "intermediate hypothalamus") AnnotationAssertion(Annotation( "MESH:A08.186.211.730.385.357.352") "medial hypothalamus") AnnotationAssertion(Annotation( "MESH:A08.186.211.730.385.357.352") "middle hypothalamus") AnnotationAssertion(Annotation( "NeuroNames:392") Annotation( ) "regio hypothalamica intermedia") AnnotationAssertion( "UBERON:0002555") AnnotationAssertion(rdfs:comment ")") AnnotationAssertion(rdfs:label "intermediate hypothalamic region") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (corticotectal tract) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:cte") AnnotationAssertion( "BAMS:ctt") AnnotationAssertion( "BIRNLEX:1016") AnnotationAssertion( "BM:CTT") AnnotationAssertion( "DHBA:12050") AnnotationAssertion( "FMA:72419") AnnotationAssertion( "MBA:1036") AnnotationAssertion(Annotation( "BIRNLEX:1016") "UMLS:C0262216") AnnotationAssertion(Annotation( "BIRNLEX:1016") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=485") AnnotationAssertion(Annotation( "FMA:72419") "corticotectal fibers") AnnotationAssertion(Annotation( "FMA:72419") "corticotectal fibres") AnnotationAssertion(Annotation( "FMA:72419") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "fibrae corticotectales") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:485") "cortico-tectal tract") AnnotationAssertion(Annotation( "NeuroNames:485") Annotation( ) "tractus corticotectalis") AnnotationAssertion( "UBERON:0002556") AnnotationAssertion(rdfs:label "corticotectal tract") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf(Annotation( "NIFSTD"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (linear nucleus) AnnotationAssertion(Annotation( "BIRNLEX:1018") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "Li") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:1018") AnnotationAssertion( "DHBA:12230") AnnotationAssertion( "FMA:72436") AnnotationAssertion(Annotation( "BIRNLEX:1018") "UMLS:C0175404") AnnotationAssertion(Annotation( "BIRNLEX:1018") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=519") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:519") Annotation( ) "nucleus linearis") AnnotationAssertion(Annotation( "NeuroNames:519") "rostral and caudal linear nuclei of the raphe") AnnotationAssertion( "UBERON:0002557") AnnotationAssertion(rdfs:comment "The mesocorticolimbic dopamine (DA) system plays important roles in reward, motivation, learning, memory, and movement. This system arises from the A10 region, comprising the ventral tegmental area and three adjacent midline nuclei (caudal linear nucleus, interfascicular nucleus, and rostral linear nucleus of the raphe)[PMID:21653852]") AnnotationAssertion(rdfs:label "linear nucleus") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (organ cavity) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:1019") AnnotationAssertion( "FMA:12237") AnnotationAssertion(Annotation( "FMA:12237") "cavity of organ") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002558") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "organ cavity") SubClassOf( ) # Class: (medullary reticular formation) AnnotationAssertion(Annotation( "GO:0021723") "The reticular formation is a series of brain nuclei located in the medulla oblongata.") AnnotationAssertion(Annotation( "ZFA"^^xsd:string) "ZFA:0000421 is part of the the medulla oblongata, so it is placed here, rather than with the generic term") AnnotationAssertion(Annotation( "ZFA:0000421") "reticular formation") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:MDRN") AnnotationAssertion( "BAMS:MeRF") AnnotationAssertion( "BAMS:RET-MO") AnnotationAssertion( "BIRNLEX:1020") AnnotationAssertion( "BM:Me-MeRF") AnnotationAssertion( "DHBA:12616") AnnotationAssertion( "EMAPA:35556") AnnotationAssertion( "FMA:72241") AnnotationAssertion( "GAID:588") AnnotationAssertion( "HBA:9587") AnnotationAssertion( "MA:0001049") AnnotationAssertion( "MBA:395") AnnotationAssertion( "TAO:0000421") AnnotationAssertion(Annotation( "BIRNLEX:1020") "UMLS:C0228520") AnnotationAssertion( "ZFA:0000421") AnnotationAssertion(Annotation( "BIRNLEX:1020") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=725") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bulb reticular formation") AnnotationAssertion(Annotation( "FMA:72241") "bulbar reticular formation") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "medulla oblongata reticular formation") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "medulla oblonmgata reticular formation") AnnotationAssertion(Annotation( "MA:0001049") "medullary reticular nucleus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "metepencephalon reticular formation") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "reticular formation of bulb") AnnotationAssertion(Annotation( "FMA:72241") "reticular formation of medulla") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "reticular formation of medulla oblongata") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "reticular formation of medulla oblonmgata") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "reticular formation of metepencephalon") AnnotationAssertion(Annotation( "GO:0021723") "rhombencephalic reticular formation") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:725") Annotation( ) "formatio reticularis myelencephali") AnnotationAssertion( "UBERON:0002559") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "medullary reticular formation") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (temporal operculum) AnnotationAssertion(Annotation( "BIRNLEX:1025") "Part of temporal lobe overlaying the insular cortex.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:TOp") AnnotationAssertion( "BAMS:top") AnnotationAssertion( "BIRNLEX:1025") AnnotationAssertion( "FMA:74891") AnnotationAssertion(Annotation( "BIRNLEX:1025") "UMLS:C0149551") AnnotationAssertion(Annotation( "BIRNLEX:1025") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=127") AnnotationAssertion(Annotation( "FMA:74891") "facies supratemporalis") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "operculum temporale") AnnotationAssertion( "UBERON:0002560") AnnotationAssertion(rdfs:label "temporal operculum") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lumen of central nervous system) AnnotationAssertion(Annotation( ) "The cavity that is enclosed by the central nervous system. In vertebrates this is the cavity that includes as parts ventricular cavities and the central canal of the spinal cord that develops from the lumen of the neura tube.") AnnotationAssertion(Annotation( ) ) AnnotationAssertion( "BIRNLEX:1029") AnnotationAssertion( "FMA:75007") AnnotationAssertion(Annotation( "FMA:75007") "cavity of neuraxis") AnnotationAssertion(Annotation( "FMA:75007") "cavity of ventricular system of neuraxis") AnnotationAssertion(Annotation( "FMA:75007") "neuraxis cavity") AnnotationAssertion( "neuraxis lumen") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002561") AnnotationAssertion(rdfs:label "lumen of central nervous system") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (superior frontal sulcus) AnnotationAssertion(Annotation( ) "The superior frontal sulcus is a sulcus between the superior frontal gyrus and the middle frontal gyrus. [WP,unvetted].") AnnotationAssertion(Annotation( "BIRNLEX:1030") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "SFRS") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:sfrs") AnnotationAssertion( "BAMS:sfs") AnnotationAssertion( "BIRNLEX:1030") AnnotationAssertion( "DHBA:10639") AnnotationAssertion( "FMA:83755") AnnotationAssertion( "HBA:9356") AnnotationAssertion( "NCIT:C33676") AnnotationAssertion(Annotation( "BIRNLEX:1030") "UMLS:C0228198") AnnotationAssertion(Annotation( "ncithesaurus:Superior_Frontal_Sulcus") "UMLS:C0228198") AnnotationAssertion(Annotation( "BIRNLEX:1030") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=61") AnnotationAssertion(Annotation( "FMA:83755") "sulcus f1") AnnotationAssertion(Annotation( "BIRNLEX:1030") "sulcus frontalis primus") AnnotationAssertion(Annotation( "BIRNLEX:1030") "sulcus frontalis superior") AnnotationAssertion(Annotation( "FMA:83755") "superior frontal fissure") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "sulcus frontalis superior") AnnotationAssertion( "UBERON:0002562") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "superior frontal sulcus") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/2/2f/Gray726_Superior_frontal_sulcus.svg"^^xsd:anyURI) SubClassOf( ) # Class: (central nucleus of inferior colliculus) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:CIC") AnnotationAssertion( "BAMS:ICC") AnnotationAssertion( "BIRNLEX:1035") AnnotationAssertion( "BM:MB-Tec-ICC") AnnotationAssertion( "DHBA:12309") AnnotationAssertion( "DMBA:16698") AnnotationAssertion( "FMA:72413") AnnotationAssertion( "HBA:9104") AnnotationAssertion( "MBA:811") AnnotationAssertion(Annotation( "BIRNLEX:1035") "UMLS:C0175371") AnnotationAssertion(Annotation( "BIRNLEX:1035") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=479") AnnotationAssertion(Annotation( "FMA:72413") "chief nucleus of inferior colliculus") AnnotationAssertion(Annotation( "FMA:72413") "inferior colliculus, central nucleus") AnnotationAssertion(Annotation( "FMA:72413") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "nucleus centralis colliculi inferioris") AnnotationAssertion( "nucleus of inferior colliculus (Crosby)") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BAMS:CIC") "central cortex of the inferior colliculus") AnnotationAssertion(Annotation( "NeuroNames:479") "central nucleus of the inferior colliculus") AnnotationAssertion(Annotation( "BAMS:ICc") "inferior colliculus central nucleus") AnnotationAssertion(Annotation( "NeuroNames:479") Annotation( ) "nucleus centralis (colliculi inferioris)") AnnotationAssertion( "UBERON:0002563") AnnotationAssertion(rdfs:label "central nucleus of inferior colliculus") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lateral orbital gyrus) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:LOrG") AnnotationAssertion( "BIRNLEX:1036") AnnotationAssertion( "DHBA:12125") AnnotationAssertion( "FMA:62418") AnnotationAssertion( "HBA:4059") AnnotationAssertion(Annotation( "BIRNLEX:1036") "UMLS:C0262268") AnnotationAssertion(Annotation( "BIRNLEX:1036") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=92") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:92") Annotation( ) "gyrus orbitalis lateralis") AnnotationAssertion(Annotation( "NeuroNames:92") Annotation( ) "gyrus orbitalis longitudinalis externus") AnnotationAssertion( "UBERON:0002564") AnnotationAssertion(rdfs:label "lateral orbital gyrus") SubClassOf( ) DisjointClasses(Annotation( "lexical"^^xsd:string) ) # Class: (olivary pretectal nucleus) AnnotationAssertion(Annotation( "BIRNLEX:1037") "Small distinct nucleus in the pretectum of mammals involved in the pupillary light reflect. In rats, it is an olive shaped (anterior) nucleus lying ventral to the brachium of the superior colliculus (Paxinos, The rat nervous system, 2nd ed, 1995, pg. 862). Physiologically, it is identified by neurons sensitive to luminance changes.") AnnotationAssertion( "B&H states this present in urodeles; modify definition") AnnotationAssertion(Annotation( "ISBN:0471888893"^^xsd:string) ) AnnotationAssertion(Annotation( "ISBN:0471888893"^^xsd:string) ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:APN") AnnotationAssertion( "BAMS:APT") AnnotationAssertion( "BAMS:OP") AnnotationAssertion( "BAMS:OPT") AnnotationAssertion( "BAMS:OPt") AnnotationAssertion( "BIRNLEX:1037") AnnotationAssertion( "BM:MB-Tec-OPT") AnnotationAssertion( "DHBA:12186") AnnotationAssertion( "DMBA:16589") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37921") AnnotationAssertion( "FMA:72405") AnnotationAssertion( "HBA:9086") AnnotationAssertion( "MBA:706") AnnotationAssertion(Annotation( "BIRNLEX:1037") "UMLS:C0175359") AnnotationAssertion(Annotation( "BIRNLEX:1037") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=472") AnnotationAssertion(Annotation( "ISBN:0471888893"^^xsd:string) Annotation( ) "nucleus praetectalis olivaris") AnnotationAssertion(Annotation( "FMA:72405") "olivary nucleus of superior colliculus") AnnotationAssertion(Annotation( "FMA:72405") "pretectal olivary nucleus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:72405") "anterior pretectal nucleus") AnnotationAssertion(Annotation( "NeuroNames:472") Annotation( ) "nucleus olivaris colliculi superioris (Fuse)") AnnotationAssertion(Annotation( "NeuroNames:472") Annotation( ) "nucleus olivaris corporis quadrigemini anterioris") AnnotationAssertion(Annotation( "NeuroNames:472") Annotation( ) "nucleus olivaris mesencephali") AnnotationAssertion(Annotation( "NeuroNames:472") Annotation( ) "nucleus olivaris pretectalis of Fuse") AnnotationAssertion(Annotation( "NeuroNames:472") Annotation( ) "nucleus praetectalis anterior") AnnotationAssertion(Annotation( "FMA:72405") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "nucleus pretectalis anterior") AnnotationAssertion( "UBERON:0002565") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "olivary pretectal nucleus") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (superior precentral sulcus) AnnotationAssertion( "todo - compare with precentral sulcus") AnnotationAssertion(Annotation( "BIRNLEX:1038") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "SPRS") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:sprs") AnnotationAssertion( "BIRNLEX:1038") AnnotationAssertion( "FMA:83763") AnnotationAssertion( "HBA:265505362") AnnotationAssertion(Annotation( "BIRNLEX:1038") "UMLS:C0262338") AnnotationAssertion(Annotation( "BIRNLEX:1038") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=71") AnnotationAssertion(Annotation( "FMA:83763") "precentral dimple") AnnotationAssertion(Annotation( "BIRNLEX:1038") "sulcus praecentralis superior") AnnotationAssertion(Annotation( "BIRNLEX:1038") "sulcus precentralis superior") AnnotationAssertion(Annotation( "FMA:83763") "superior part of precentral fissure") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:71") "superior precentral dimple") AnnotationAssertion( "UBERON:0002566") AnnotationAssertion(rdfs:label "superior precentral sulcus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (basal part of pons) AnnotationAssertion(Annotation( "FMA:72244") "Ventral subdivision of the pons which consists of the massive pontine pertuberance on pontine ventral surface.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:Bpons") AnnotationAssertion( "BIRNLEX:1043") AnnotationAssertion( "DHBA:12405") AnnotationAssertion( "FMA:72244") AnnotationAssertion( "HBA:9132") AnnotationAssertion(Annotation( "BIRNLEX:1043") "UMLS:C0228427") AnnotationAssertion(Annotation( "BIRNLEX:1043") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=616") AnnotationAssertion(Annotation( "FMA:72244") "basal portion of pons") AnnotationAssertion(Annotation( "FMA:72244") "base of pons") AnnotationAssertion(Annotation( "FMA:72244") "basilar part of pons") AnnotationAssertion(Annotation( "FMA:72244") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "pars basilaris pontis") AnnotationAssertion(Annotation( "FMA:72244") "pons proper") AnnotationAssertion( "ventral pons") AnnotationAssertion(Annotation( "FMA:72244") "ventral portion of pons") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:616") "basal part of the pons") AnnotationAssertion(Annotation( "NeuroNames:616") "basilar pons") AnnotationAssertion(Annotation( "NeuroNames:616") Annotation( ) "basis pontis") AnnotationAssertion(Annotation( "NeuroNames:616") Annotation( ) "pars anterior pontis") AnnotationAssertion(Annotation( "NeuroNames:616") Annotation( ) "pars ventralis pontis") AnnotationAssertion( "UBERON:0002567") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "basal part of pons") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (amiculum of dentate nucleus) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:amdt") AnnotationAssertion( "BIRNLEX:1044") AnnotationAssertion( "FMA:72546") AnnotationAssertion(Annotation( "BIRNLEX:1044") "UMLS:C0175487") AnnotationAssertion(Annotation( "BIRNLEX:1044") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=686") AnnotationAssertion(Annotation( "FMA:72546") "dentate nuclear amiculum") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:686") Annotation( ) "amiculum nuclei dentati") AnnotationAssertion(Annotation( "NeuroNames:686") "amiculum of the dentate nucleus") AnnotationAssertion( "UBERON:0002568") AnnotationAssertion(rdfs:label "amiculum of dentate nucleus") SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (transverse temporal sulcus) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:tts") AnnotationAssertion( "BIRNLEX:1045") AnnotationAssertion( "DHBA:146034852") AnnotationAssertion( "FMA:83782") AnnotationAssertion(Annotation( "BIRNLEX:1045") "UMLS:C0228239") AnnotationAssertion(Annotation( "BIRNLEX:1045") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=128") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:128") Annotation( ) "sulci temporales transversi") AnnotationAssertion(Annotation( ) "transverse temporal sulci") AnnotationAssertion( "UBERON:0002569") AnnotationAssertion(rdfs:label "transverse temporal sulcus") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ) # Class: (medial orbital gyrus) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:MOrG") AnnotationAssertion( "BIRNLEX:1046") AnnotationAssertion( "DHBA:12122") AnnotationAssertion( "FMA:62419") AnnotationAssertion( "HBA:4050") AnnotationAssertion(Annotation( "BIRNLEX:1046") "UMLS:C0175179") AnnotationAssertion(Annotation( "BIRNLEX:1046") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=93") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:93") Annotation( ) "gyrus orbitalis longitudinalis internus") AnnotationAssertion(Annotation( "NeuroNames:93") Annotation( ) "gyrus orbitalis medialis") AnnotationAssertion(Annotation( "NeuroNames:93") Annotation( ) "gyrus orbitalis medius") AnnotationAssertion( "UBERON:0002570") AnnotationAssertion(rdfs:label "medial orbital gyrus") SubClassOf( ) # Class: (external nucleus of inferior colliculus) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:EIC") AnnotationAssertion( "BAMS:ICe") AnnotationAssertion( "BIRNLEX:1047") AnnotationAssertion( "BM:MB-Tec-ICX") AnnotationAssertion( "DHBA:12308") AnnotationAssertion( "FMA:72412") AnnotationAssertion( "HBA:9105") AnnotationAssertion( "MBA:828") AnnotationAssertion(Annotation( "BIRNLEX:1047") "UMLS:C0175370") AnnotationAssertion(Annotation( "BIRNLEX:1047") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=478") AnnotationAssertion(Annotation( "FMA:72412") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "nucleus externus colliculi inferioris") AnnotationAssertion(Annotation( "FMA:72412") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "nucleus lateralis colliculi inferioris") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:478") "external cortex of the inferior colliculus") AnnotationAssertion(Annotation( "NeuroNames:478") "external nucleus of the inferior colliculus") AnnotationAssertion(Annotation( "NeuroNames:478") "inferior colliculus, external nucleus") AnnotationAssertion(Annotation( "NeuroNames:478") Annotation( ) "nucleus externus (colliculi inferioris)") AnnotationAssertion( "UBERON:0002571") AnnotationAssertion(rdfs:label "external nucleus of inferior colliculus") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (principal pretectal nucleus) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:PPt") AnnotationAssertion( "BIRNLEX:1048") AnnotationAssertion( "DMBA:16586") AnnotationAssertion( "FMA:72402") AnnotationAssertion( "HBA:9089") AnnotationAssertion(Annotation( "BIRNLEX:1048") "UMLS:C0175355") AnnotationAssertion(Annotation( "BIRNLEX:1048") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=469") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:469") Annotation( ) "nucleus pretectalis principalis") AnnotationAssertion( "UBERON:0002572") AnnotationAssertion(rdfs:label "principal pretectal nucleus") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ) # Class: (pontine reticular formation) AnnotationAssertion(Annotation( ) "The reticular formation is a part of the brain that is involved in actions such as awaking/sleeping cycle, and filtering incoming stimuli to discriminate irrelevant background stimuli. It is essential for governing some of the basic functions of higher organisms, and is one of the phylogenetically oldest portions of the brain. [WP,unvetted].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:PRF") AnnotationAssertion( "BAMS:PRN") AnnotationAssertion( "BAMS:PRNr") AnnotationAssertion( "BAMS:RET-PONS") AnnotationAssertion( "BIRNLEX:1050") AnnotationAssertion( "BM:Pons-PRF") AnnotationAssertion( "DHBA:12480") AnnotationAssertion( "EMAPA:35693") AnnotationAssertion( "FMA:68876") AnnotationAssertion( "HBA:9161") AnnotationAssertion(Annotation( "BIRNLEX:1050") "UMLS:C0228428") AnnotationAssertion(Annotation( "BIRNLEX:1050") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=561") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "pons of varolius reticular formation") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "pons reticular formation") AnnotationAssertion(Annotation( "ABA:PRNr") "pontine reticular nucleus") AnnotationAssertion(Annotation( "FMA:68876") "reticular formation of pons") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "reticular formation of pons of varolius") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:561") Annotation( ) "formatio reticularis pontis") AnnotationAssertion(Annotation( "BAMS:PRNr") "pontine reticular nucleus rostral part") AnnotationAssertion( "UBERON:0002573") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "pontine reticular formation") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/9/9b/Gray701.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (obsolete regional part of inferior olivary complex) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A regional part of brain that is part of a inferior olivary complex [Automatically generated definition].") AnnotationAssertion( "BIRNLEX:1052") AnnotationAssertion( "FMA:71259") AnnotationAssertion(Annotation( "FMA:71259") "inferior olivary complex segment") AnnotationAssertion(Annotation( "BIRNLEX:1052") "segment of inferior olivary complex") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002574") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "obsolete regional part of inferior olivary complex") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (posterior orbital gyrus) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:POrG") AnnotationAssertion( "BIRNLEX:1054") AnnotationAssertion( "FMA:80184") AnnotationAssertion( "HBA:4056") AnnotationAssertion(Annotation( "BIRNLEX:1054") "OldNeuroNames:-1761421113") AnnotationAssertion(Annotation( "BIRNLEX:1054") "UMLS:C0458323") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002575") AnnotationAssertion(rdfs:label "posterior orbital gyrus") SubClassOf( ) DisjointClasses(Annotation( "lexical"^^xsd:string) ) # Class: (temporal pole) AnnotationAssertion(Annotation( "BIRNLEX:1055") "Anterior component of the temporal lobe (rostral boundary) extends caudally to the entorhinal cortex. The medial and lateral boundaries are the medial aspect of the temporal lobe and the superior or inferior temporal sulci, respectively (Christine Fennema-Notestine).") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:TmP") AnnotationAssertion( "BAMS:tmp") AnnotationAssertion( "BIRNLEX:1055") AnnotationAssertion( "DHBA:12146") AnnotationAssertion( "FMA:74890") AnnotationAssertion( "HBA:4174") AnnotationAssertion(Annotation( "BIRNLEX:1055") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=126") AnnotationAssertion(Annotation( "NeuroNames:126") Annotation( ) "polus temporalis") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:126") "temporal pole, cerebral cortex") AnnotationAssertion(Annotation( "BIRNLEX:1055") "temporopolar cortex") AnnotationAssertion( "UBERON:0002576") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "temporal pole") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/e/e3/Human_brain_lateral_view_description.JPG"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pericentral nucleus of inferior colliculus) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:ICP") AnnotationAssertion( "BAMS:PCIC") AnnotationAssertion( "BIRNLEX:1056") AnnotationAssertion( "BM:MB-Tec-ICP") AnnotationAssertion( "DHBA:12306") AnnotationAssertion( "FMA:72411") AnnotationAssertion( "HBA:9106") AnnotationAssertion( "MBA:820") AnnotationAssertion(Annotation( "BIRNLEX:1056") "UMLS:C0175369") AnnotationAssertion(Annotation( "BIRNLEX:1056") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=477") AnnotationAssertion(Annotation( "FMA:72411") "cortex of inferior colliculus") AnnotationAssertion(Annotation( "FMA:72411") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "nucleus pericentralis colliculi inferioris") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:477") "dorsal cortex of the inferior colliculus") AnnotationAssertion(Annotation( "NeuroNames:477") "inferior colliculus, dorsal nucleus") AnnotationAssertion(Annotation( "NeuroNames:477") Annotation( ) "nucleus pericentralis (colliculi inferioris)") AnnotationAssertion(Annotation( "NeuroNames:477") "pericentral nucleus of the inferior colliculus") AnnotationAssertion( "UBERON:0002577") AnnotationAssertion(rdfs:label "pericentral nucleus of inferior colliculus") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (sublentiform nucleus) AnnotationAssertion( ) AnnotationAssertion( "BAMS:SLn") AnnotationAssertion(Annotation( "retired in NIFSTD present in neurlex") "BIRNLEX:1057") AnnotationAssertion( "FMA:72404") AnnotationAssertion( "HBA:9092") AnnotationAssertion(Annotation( "NeuroNames:471") Annotation( ) "nucleus sublentiformis") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002578") AnnotationAssertion(rdfs:label "sublentiform nucleus") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ) # Class: (obsolete regional part of medullary reticular formation) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A regional part of brain that is part of a medullary reticular formation [Automatically generated definition].") AnnotationAssertion( "BIRNLEX:1060") AnnotationAssertion( "FMA:73730") AnnotationAssertion(Annotation( "FMA:73730") "medullary reticular formation segment") AnnotationAssertion(Annotation( "BIRNLEX:1060") "segment of medullary reticular formation") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002579") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "obsolete regional part of medullary reticular formation") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (brachium of superior colliculus) AnnotationAssertion(Annotation( "BIRNLEX:1065") "Bundle of fibers that passes over the medial geniculate nucleus (in humans) to reach the superior colliculus. Contains afferents from the retina.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:bsc") AnnotationAssertion( "BIRNLEX:1065") AnnotationAssertion( "BM:MB-BSC") AnnotationAssertion( "DHBA:12328") AnnotationAssertion( "FMA:72417") AnnotationAssertion( "HBA:265505398") AnnotationAssertion( "MBA:916") AnnotationAssertion(Annotation( "BIRNLEX:1065") "UMLS:C0175368") AnnotationAssertion(Annotation( "BIRNLEX:1065") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=474") AnnotationAssertion(Annotation( "FMA:72417") "superior brachium") AnnotationAssertion(Annotation( "FMA:72417") "superior collicular brachium") AnnotationAssertion(Annotation( "FMA:72417") "superior colliculus brachium") AnnotationAssertion(Annotation( "FMA:72417") "superior quadrigeminal brachium") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:474") Annotation( ) "brachium colliculi cranialis") AnnotationAssertion(Annotation( "NeuroNames:474") Annotation( ) "brachium colliculi rostralis") AnnotationAssertion(Annotation( ) Annotation( ) "brachium colliculi superioris") AnnotationAssertion(Annotation( "NeuroNames:474") "brachium of the superior colliculus") AnnotationAssertion(Annotation( "NeuroNames:474") Annotation( ) "brachium quadrigeminum superius") AnnotationAssertion( "UBERON:0002580") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "brachium of superior colliculus") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/2/29/Human_brainstem-thalamus_posterior_view_description.JPG"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (postcentral gyrus) AnnotationAssertion(Annotation( "BIRNLEX:1070") "Component of the parietal lobe. The appearance and disappearance of the central sulcus were the rostral and caudal boundaries of the postcentral gyrus respectively. The medial and lateral boundaries were the lateral bank of the precentral gyrus and the lateral fissure and/or the medial bank of the superior parietal gyrus respectively (Christine Fennema-Notestine).") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:PoG") AnnotationAssertion( "BIRNLEX:1070") AnnotationAssertion( "BTO:0004354") AnnotationAssertion( "DHBA:12132") AnnotationAssertion( "EFO:0001383") AnnotationAssertion( "FMA:61896") AnnotationAssertion( "HBA:4085") AnnotationAssertion( "NCIT:C33346") AnnotationAssertion(Annotation( "BIRNLEX:1070") "UMLS:C0152302") AnnotationAssertion(Annotation( "ncithesaurus:Postcentral_Gyrus") "UMLS:C0152302") AnnotationAssertion(Annotation( "BIRNLEX:1070") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=105") AnnotationAssertion(Annotation( "NeuroNames:105") Annotation( ) "gyrus postcentralis") AnnotationAssertion(Annotation( "FMA:61896") "postcentral convolution") AnnotationAssertion(Annotation( "FMA:61896") "posterior central gyrus") AnnotationAssertion(Annotation( "FMA:61896") "postrolandic gyrus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:105") Annotation( ) "gyrus centralis posterior") AnnotationAssertion(Annotation( "NeuroNames:105") "post central gyrus") AnnotationAssertion(Annotation( ) "somatosensory cortex") AnnotationAssertion( "UBERON:0002581") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "postcentral gyrus") AnnotationAssertion( "Postcentral:gyrus.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (anterior calcarine sulcus) AnnotationAssertion(Annotation( "BIRNLEX:1072") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "ACCS") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:accs") AnnotationAssertion( "BAMS:acs") AnnotationAssertion( "BIRNLEX:1072") AnnotationAssertion( "FMA:83750") AnnotationAssertion(Annotation( "BIRNLEX:1072") "UMLS:C0262187") AnnotationAssertion(Annotation( "BIRNLEX:1072") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=45") AnnotationAssertion(Annotation( "FMA:83750") "anterior calcarine fissure") AnnotationAssertion(Annotation( "BIRNLEX:1072") "sulcus calcarinus anterior") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002582") AnnotationAssertion(rdfs:label "anterior calcarine sulcus") SubClassOf( ) DisjointClasses(Annotation( "lexical"^^xsd:string) ) # Class: (commissure of superior colliculus) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A commissure that is part of a superior colliculus [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:SCC") AnnotationAssertion( "BAMS:csc") AnnotationAssertion( "BIRNLEX:1073") AnnotationAssertion( "BM:MB-Tec-SC-SCX") AnnotationAssertion( "FMA:72418") AnnotationAssertion( "MBA:336") AnnotationAssertion( "TAO:0000684") AnnotationAssertion(Annotation( "BIRNLEX:1073") "UMLS:C0152366") AnnotationAssertion( "ZFA:0000684") AnnotationAssertion(Annotation( "BIRNLEX:1073") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=475") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "anterior colliculus commissure") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "anterior corpus quadrigeminum commissure") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "commissure of anterior colliculus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "commissure of anterior corpus quadrigeminum") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "commissure of cranial colliculus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "commissure of optic tectum") AnnotationAssertion(Annotation( "FMA:72418") "commissure of superior colliculi") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "cranial colliculus commissure") AnnotationAssertion(Annotation( "ZFA:0000684") Annotation( ) "intertectal commissure") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "optic tectum commissure") AnnotationAssertion(Annotation( "FMA:72418") "superior colliculus commissure") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:475") Annotation( ) "commissura colliculi superior") AnnotationAssertion(Annotation( "NeuroNames:475") Annotation( ) "commissura colliculi superioris") AnnotationAssertion(Annotation( "NeuroNames:475") Annotation( ) "commissura colliculorum cranialium") AnnotationAssertion(Annotation( "NeuroNames:475") Annotation( ) "commissura colliculorum rostralium") AnnotationAssertion(Annotation( "NeuroNames:475") Annotation( ) "commissura colliculorum superiorum") AnnotationAssertion(Annotation( "BAMS:SCC") Annotation( "BAMS:csc") "commissure of the superior colliculi") AnnotationAssertion(Annotation( "NeuroNames:475") "commissure of the superior colliculus") AnnotationAssertion( "UBERON:0002583") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "commissure of superior colliculus") SubClassOf( ) SubClassOf(Annotation( "NIFSTD-modified") ObjectSomeValuesFrom( )) DisjointClasses(Annotation( "lexical"^^xsd:string) ) # Class: (obsolete regional part of vestibular nuclear complex) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A regional part of brain that is part of a vestibular nuclear complex [Automatically generated definition].") AnnotationAssertion( "BIRNLEX:1080") AnnotationAssertion( "FMA:71267") AnnotationAssertion(Annotation( "BIRNLEX:1080") "segment of vestibular nuclear complex") AnnotationAssertion(Annotation( "FMA:71267") "vestibular nuclear complex segment") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002584") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "obsolete regional part of vestibular nuclear complex") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (central tegmental tract of midbrain) AnnotationAssertion(Annotation( "BIRNLEX:1081") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "CTGMB") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:ctgmb") AnnotationAssertion( "BIRNLEX:1081") AnnotationAssertion( "FMA:72456") AnnotationAssertion(Annotation( "BIRNLEX:1081") "UMLS:C0152364") AnnotationAssertion(Annotation( "BIRNLEX:1081") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=528") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:528") "central tegmental tract of the midbrain") AnnotationAssertion(Annotation( "NeuroNames:528") Annotation( ) "tractus tegmentalis centralis (mesencephali)") AnnotationAssertion( "UBERON:0002585") AnnotationAssertion(rdfs:label "central tegmental tract of midbrain") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (calcarine sulcus) AnnotationAssertion(Annotation( ) "The calcarine fissure is an anatomical landmark located at the caudal end of the medial surface of the brain. [WP,unvetted].") AnnotationAssertion(Annotation( "BIRNLEX:1086") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "CCS") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:1086") AnnotationAssertion( "BM:Tel-Cx-CAS") AnnotationAssertion( "DHBA:10612") AnnotationAssertion( "FMA:83749") AnnotationAssertion( "HBA:9391") AnnotationAssertion( "NCIT:C32252") AnnotationAssertion(Annotation( "BIRNLEX:1086") "UMLS:C0228224") AnnotationAssertion(Annotation( "ncithesaurus:Calcarine_Sulcus") "UMLS:C0228224") AnnotationAssertion(Annotation( "BIRNLEX:1086") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=44") AnnotationAssertion(Annotation( "FMA:83749") "calcarine fissure") AnnotationAssertion(Annotation( "BIRNLEX:1086") "sulcus calcarinus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:44") Annotation( ) "fissura calcarina") AnnotationAssertion( "UBERON:0002586") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "calcarine sulcus") SubClassOf( ) SubClassOf(Annotation( "NIFSTD"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (nucleus subceruleus) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:SLC") AnnotationAssertion( "BAMS:SubC") AnnotationAssertion( "BIRNLEX:1088") AnnotationAssertion( "DHBA:12500") AnnotationAssertion( "FMA:72479") AnnotationAssertion( "HBA:9154") AnnotationAssertion( "MBA:350") AnnotationAssertion(Annotation( "BIRNLEX:1088") "UMLS:C0175441") AnnotationAssertion(Annotation( "BIRNLEX:1088") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=584") AnnotationAssertion(Annotation( "FMA:72479") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "nucleus subcaeruleus") AnnotationAssertion(Annotation( "FMA:72479") "subcaerulean nucleus") AnnotationAssertion( "subceruleus nucleus") AnnotationAssertion( "subcoeruleus nucleus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BAMS:SLC") "nucleus subcoeruleus") AnnotationAssertion( "UBERON:0002587") AnnotationAssertion(rdfs:label "nucleus subceruleus") SubClassOf( ) # Class: (decussation of superior cerebellar peduncle) AnnotationAssertion(Annotation( ) Annotation( "BIRNLEX:1089") "Regional part of superior cerebellar peduncle located in the caudal midbrain, at the level of the inferior colliculus, consisting of a large bundle of fibers crossing the midline. It contains fibers projecting from the deep cerebellar nucleus to the midbrain and thalamus through the superior cerebellar peduncle (MM). The decussation of superior cerebellar peduncle is the portion of the superior cerebellar peduncle which crosses into the midbrain. [WP,unvetted].") AnnotationAssertion( "UBERON:0003032") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:dscp") AnnotationAssertion( "BAMS:xscp") AnnotationAssertion( "BIRNLEX:1089") AnnotationAssertion( "BM:BCX") AnnotationAssertion( "DHBA:12337") AnnotationAssertion( "FMA:72455") AnnotationAssertion( "HBA:265505482") AnnotationAssertion( "MBA:812") AnnotationAssertion(Annotation( "BIRNLEX:1089") "UMLS:C0152374") AnnotationAssertion(Annotation( "BIRNLEX:1089") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=527") AnnotationAssertion(Annotation( "FMA:72455") "Wernekink's decussation") AnnotationAssertion(Annotation( "FMA:72455") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "decussatio pedunculorum cerebellarium superiorum") AnnotationAssertion(Annotation( "FMA:72455") "decussation of brachium conjunctivum") AnnotationAssertion(Annotation( "FMA:72455") "decussation of superior cerebellar peduncles") AnnotationAssertion(Annotation( "FMA:72455") "superior cerebellar peduncle decussation") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:527") Annotation( ) "decussatio brachii conjunctivi") AnnotationAssertion(Annotation( "NeuroNames:527") Annotation( ) "decussatio crurorum cerebello-cerebralium") AnnotationAssertion(Annotation( "NeuroNames:527") "decussation of the superior cerebellar peduncle") AnnotationAssertion(Annotation( "NeuroNames:527") "decussation of the superior cerebellar peduncle (Wernekinck)") AnnotationAssertion(Annotation( "BAMS:dscp") "descussation of the scp") AnnotationAssertion( "UBERON:0002588") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "decussation of superior cerebellar peduncle") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/2/26/Gray711.png"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lateral corticospinal tract) AnnotationAssertion(Annotation( "BIRNLEX:1095") "Part of the corticospinal tract located in the spinal cord, formed as 75 to 90% of the corticospinal fibers cross to the opposite side of the brainstem in the pyramidal decussation. This tract descends the length of the spinal cord in the lateral white column (Adapted from Brain Info).") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:lcsp") AnnotationAssertion( "BAMS:py") AnnotationAssertion( "BIRNLEX:1095") AnnotationAssertion( "DHBA:12759") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37888") AnnotationAssertion( "FMA:72635") AnnotationAssertion( "MBA:1019") AnnotationAssertion( "NCIT:C32406") AnnotationAssertion(Annotation( "BIRNLEX:1095") "UMLS:C0152402") AnnotationAssertion(Annotation( "BIRNLEX:1095") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=801") AnnotationAssertion(Annotation( "MBA:1019") "corticospinal tract, crossed") AnnotationAssertion( "crossed pyramidal tract") AnnotationAssertion(Annotation( "FMA:72635") "lateral pyramidal tract") AnnotationAssertion(Annotation( "BAMS:py") "pyramidal tract, crossed") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:2954") "corticospinal tract, crossed") AnnotationAssertion(Annotation( "NeuroNames:2954") "crossed corticospinal tract") AnnotationAssertion(Annotation( ) Annotation( ) "fasciculus cerebrospinalis lateralis") AnnotationAssertion(Annotation( "NeuroNames:2954") "lateral corticospinal tract") AnnotationAssertion(Annotation( "NeuroNames:801") "lateral corticospinal tract of the medulla") AnnotationAssertion(Annotation( "NeuroNames:801") Annotation( ) "tractus corticospinalis (pyramidalis) lateralis") AnnotationAssertion(Annotation( ) Annotation( ) "tractus corticospinalis lateralis") AnnotationAssertion( "UBERON:0002589") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "lateral corticospinal tract") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/b/b2/Spinal_cord_tracts_-_English.svg"^^xsd:anyURI) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "NIFSTD"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (prepyriform area) AnnotationAssertion(Annotation( ) "Prepyriform area (or prepiriform cortex) is a portion of the rhinencephalon consisting of paleocortex. Some sources state that it is part of the primary olfactory cortex.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:1097") AnnotationAssertion( "BM:Tel-PRP") AnnotationAssertion( "DHBA:13229") AnnotationAssertion( "DHBA:266441677") AnnotationAssertion( "FMA:62484") AnnotationAssertion( "MBA:961") AnnotationAssertion(Annotation( "BIRNLEX:1097") "UMLS:C0228280") AnnotationAssertion(Annotation( "BIRNLEX:1097") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=165") AnnotationAssertion(Annotation( "BIRNLEX:1097") "(pre-)piriform cortex") AnnotationAssertion(Annotation( "FMA:62484") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "gyrus olfactorius lateralis") AnnotationAssertion(Annotation( "FMA:62484") "lateral olfactory gyrus") AnnotationAssertion( "piriform cortex (price)") AnnotationAssertion(Annotation( "BIRNLEX:1097") "piriform olfactory cortex") AnnotationAssertion(Annotation( "FMA:62484") "prepiriform cortex") AnnotationAssertion(Annotation( "FMA:62484") "prepyriform cortex") AnnotationAssertion(Annotation( "BIRNLEX:1097") "pyriform area") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:165") Annotation( ) "area prepiriformis") AnnotationAssertion(Annotation( "NeuroNames:165") Annotation( ) "eupalaeocortex") AnnotationAssertion(Annotation( "NeuroNames:165") Annotation( ) "palaeocortex II") AnnotationAssertion(Annotation( "DHBA:266441677") "prepiriform region") AnnotationAssertion(Annotation( "NeuroNames:165") Annotation( ) "regio praepiriformis") AnnotationAssertion( "UBERON:0002590") AnnotationAssertion(rdfs:label "prepyriform area") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "NIFSTD"^^xsd:string) ObjectSomeValuesFrom( )) DisjointClasses(Annotation( "lexical"^^xsd:string) ) # Class: (oral part of spinal trigeminal nucleus) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:OSp5") AnnotationAssertion( "BAMS:SPVO") AnnotationAssertion( "BAMS:Sp5O") AnnotationAssertion( "BIRNLEX:1100") AnnotationAssertion( "FMA:235322") AnnotationAssertion( "HBA:9679") AnnotationAssertion( "MBA:445") AnnotationAssertion(Annotation( "BIRNLEX:1100") "UMLS:C0175417") AnnotationAssertion(Annotation( "BIRNLEX:1100") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=835") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:835") Annotation( ) "nucleus oralis tractus spinalis nervi trigemini") AnnotationAssertion(Annotation( "NeuroNames:835") Annotation( ) "nucleus spinalis nervi trigemini, pars oralis") AnnotationAssertion(Annotation( "NeuroNames:835") "oral part of the spinal trigeminal nucleus") AnnotationAssertion(Annotation( "BAMS:SPVO") "spinal nucleus of the trigeminal oral part") AnnotationAssertion(Annotation( "NeuroNames:835") "spinal nucleus of the trigeminal, oral part") AnnotationAssertion(Annotation( "BAMS:Sp5O") "spinal trigeminal nucleus oral part") AnnotationAssertion(Annotation( "NeuroNames:835") "spinal trigeminal nucleus, oral part") AnnotationAssertion( "UBERON:0002591") AnnotationAssertion(rdfs:label "oral part of spinal trigeminal nucleus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (juxtarestiform body) AnnotationAssertion(Annotation( "BIRNLEX:1101") "Fibers interconnecting the cerebellum and vestibular nuclei, traveling medial to the restiform body (inferior cerebellar peduncle) (Nolte, The Human Brain, 6th ed., pg 497).") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:jrb") AnnotationAssertion( "BAMS:jx") AnnotationAssertion( "BIRNLEX:1101") AnnotationAssertion( "DHBA:12750") AnnotationAssertion( "FMA:72613") AnnotationAssertion( "MBA:650") AnnotationAssertion(Annotation( "BIRNLEX:1101") "UMLS:C0152394") AnnotationAssertion(Annotation( "BIRNLEX:1101") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=779") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:779") Annotation( ) "corpus juxtarestiforme") AnnotationAssertion( "UBERON:0002592") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "juxtarestiform body") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/f/fc/Gray677.png"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "NIFSTD"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (orbital operculum) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:oro") AnnotationAssertion( "BIRNLEX:1102") AnnotationAssertion( "DHBA:12128") AnnotationAssertion( "FMA:74887") AnnotationAssertion(Annotation( "BIRNLEX:1102") "UMLS:C0694580") AnnotationAssertion(Annotation( "BIRNLEX:1102") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=2394") AnnotationAssertion(Annotation( "FMA:74887") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "operculum orbitale") AnnotationAssertion(Annotation( "FMA:74887") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "pars orbitalis of frontal operculum (Ono)") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:2394") "frontal core") AnnotationAssertion(Annotation( "NeuroNames:2394") "gigantopyramidal area 4") AnnotationAssertion(Annotation( "NeuroNames:2394") "precentral gigantopyramidal field") AnnotationAssertion( "UBERON:0002593") AnnotationAssertion(rdfs:label "orbital operculum") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (dentatothalamic tract) AnnotationAssertion(Annotation( ) "The dentatothalamic tract (or dentatorubrothalamic tract) is a tract which connects the dentate nucleus and the thalamus. [WP,unvetted].") AnnotationAssertion(Annotation( "BIRNLEX:1104") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "DT") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:dt") AnnotationAssertion( "BIRNLEX:1104") AnnotationAssertion( "DHBA:12357") AnnotationAssertion( "FMA:72462") AnnotationAssertion(Annotation( "BIRNLEX:1104") "UMLS:C0175411") AnnotationAssertion(Annotation( "BIRNLEX:1104") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=534") AnnotationAssertion(Annotation( "FMA:72462") "dentatothalamic fibers") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "tractus dentatothalamicus") AnnotationAssertion( "UBERON:0002594") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "dentatothalamic tract") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (orbital sulcus) AnnotationAssertion(Annotation( ) "The inferior or orbital surface of the frontal lobe is concave, and rests on the orbital plate of the frontal bone. It is divided into four orbital gyri by a well-marked H-shaped orbital sulcus.") AnnotationAssertion(Annotation( "BIRNLEX:1112") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "ORBS") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:orbs") AnnotationAssertion( "BAMS:ors") AnnotationAssertion( "BIRNLEX:1112") AnnotationAssertion( "BM:Tel-Cx-ORS") AnnotationAssertion( "DHBA:10625") AnnotationAssertion( "FMA:83770") AnnotationAssertion( "HBA:9360") AnnotationAssertion( "NCIT:C33222") AnnotationAssertion(Annotation( "BIRNLEX:1112") "UMLS:C0228206") AnnotationAssertion(Annotation( "ncithesaurus:Orbital_Sulcus") "UMLS:C0228206") AnnotationAssertion(Annotation( "BIRNLEX:1112") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=79") AnnotationAssertion(Annotation( "BIRNLEX:1112") "cruciate sulcus of campbell") AnnotationAssertion(Annotation( "FMA:83770") Annotation( ) "orbital sulci") AnnotationAssertion(Annotation( ) "sulci orbitalis") AnnotationAssertion(Annotation( "BIRNLEX:1112") "sulcus orbitalis") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:79") Annotation( ) "sulci orbitales") AnnotationAssertion( "UBERON:0002595") AnnotationAssertion(rdfs:label "orbital sulcus") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (ventral posterior nucleus of thalamus) AnnotationAssertion(Annotation( "BIRNLEX:1116") "Part of thalamus receiving primary somatic sensory information via the medial lemniscal pathway that projects to the primary somatosensory cortex (adapted from Paxinos, The Rat Nervous System, 2nd Ed, Academic Press, 1995).") AnnotationAssertion(Annotation( "BIRNLEX:1116") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "VP") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:VP") AnnotationAssertion( "BIRNLEX:1116") AnnotationAssertion( "BM:Die-Th-VPI") AnnotationAssertion( "BTO:0004373") AnnotationAssertion( "BTO:0004374") AnnotationAssertion( "DHBA:10423") AnnotationAssertion( "DHBA:10426") AnnotationAssertion( "EMAPA:35912") AnnotationAssertion( "EV:0100209") AnnotationAssertion( "FMA:62187") AnnotationAssertion( "HBA:4426") AnnotationAssertion( "MA:0000867") AnnotationAssertion( "MBA:709") AnnotationAssertion(Annotation( "BIRNLEX:1116") "UMLS:C0175276") AnnotationAssertion(Annotation( "BIRNLEX:1116") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=343") AnnotationAssertion(Annotation( "BIRNLEX:1116") "nucleus ventrales posteriores") AnnotationAssertion(Annotation( "BIRNLEX:1116") "nucleus ventralis posterior") AnnotationAssertion(Annotation( "FMA:62187") "ventral posterior nucleus") AnnotationAssertion(Annotation( "FMA:62187") "ventral posterior thalamic nucleus") AnnotationAssertion(Annotation( "FMA:62187") "ventrobasal complex") AnnotationAssertion(Annotation( "FMA:62187") "ventrobasal nucleus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0004373") "VPN") AnnotationAssertion(Annotation( "NeuroNames:343") Annotation( ) "nuclei ventrales posteriores") AnnotationAssertion(Annotation( "BAMS:VP") "ventral posterior") AnnotationAssertion(Annotation( "ABA:VP") Annotation( "BAMS:VP") "ventral posterior complex of the thalamus") AnnotationAssertion(Annotation( "BTO:0004374") "ventroposterior inferior nucleus") AnnotationAssertion(Annotation( "BTO:0004373") "ventroposterior nucleus") AnnotationAssertion(Annotation( "BAMS:VP") "ventroposterior nucleus of thalamus") AnnotationAssertion( "UBERON:0002596") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "ventral posterior nucleus of thalamus") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/1/1b/ThalamicNuclei.png"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (principal sensory nucleus of trigeminal nerve) AnnotationAssertion(Annotation( ) Annotation( "GO:0021730") "The principal sensory nucleus (or chief sensory nucleus of V) is a group of second order neurons which have cell bodies in the dorsal Pons. It receives information about discriminative sensation and light touch of the face as well as conscious proprioception of the jaw via first order neurons of CN V. Most of the sensory information crosses the midline and travels to the contralateral ventral posteriomedial (VPM) of the thalamus via the Ventral Trigeminothalamic Tract, but information of the oral cavity travels to the ipsilateral Ventral Posteriomedial (VPM) of the thalamus via the Dorsal Trigeminothalamic Tract. [WP,unvetted].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:PSV") AnnotationAssertion( "BAMS:Pr5") AnnotationAssertion( "BIRNLEX:1120") AnnotationAssertion( "BM:VP") AnnotationAssertion( "DHBA:12444") AnnotationAssertion( "EHDAA2:0004628") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37773") AnnotationAssertion( "EV:0100274") AnnotationAssertion( "FMA:54533") AnnotationAssertion( "HBA:9207") AnnotationAssertion( "MA:0002740") AnnotationAssertion( "MBA:7") AnnotationAssertion( "NCIT:C33402") AnnotationAssertion(Annotation( "BIRNLEX:1120") "UMLS:C0228701") AnnotationAssertion(Annotation( "ncithesaurus:Principal_Sensory_Nucleus_of_the_Trigeminal_Nerve") "UMLS:C0228701") AnnotationAssertion(Annotation( "BIRNLEX:1120") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=560") AnnotationAssertion(Annotation( "FMA:54533") "chief sensory nucleus") AnnotationAssertion(Annotation( "FMA:54533") "main sensory nucleus") AnnotationAssertion( "main sensory nucleus of cranial nerve v") AnnotationAssertion( "principal sensory nucleus") AnnotationAssertion(Annotation( "FMA:54533") "principal sensory nucleus of trigeminal nerve") AnnotationAssertion(Annotation( "FMA:54533") "principal sensory trigeminal nucleus") AnnotationAssertion(Annotation( "FMA:54533") "principal trigeminal nucleus") AnnotationAssertion(Annotation( "FMA:54533") "superior trigeminal nucleus") AnnotationAssertion(Annotation( "FMA:54533") "superior trigeminal sensory nucleus") AnnotationAssertion(Annotation( "MA:0002740") "trigeminal V chief sensory nucleus") AnnotationAssertion(Annotation( "MA:0002740") "trigeminal V principal sensory nucleus") AnnotationAssertion(Annotation( "FMA:54533") "trigeminal nerve superior sensory nucleus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:560") "chief sensory trigeminal nucleus") AnnotationAssertion(Annotation( "NeuroNames:560") "chief trigeminal sensory nucleus") AnnotationAssertion(Annotation( "NeuroNames:560") Annotation( ) "nucleus pontinus nervi trigeminalis") AnnotationAssertion(Annotation( "NeuroNames:560") Annotation( ) "nucleus pontinus nervi trigemini") AnnotationAssertion(Annotation( "NeuroNames:560") Annotation( ) "nucleus principalis nervi trigemini") AnnotationAssertion(Annotation( "NeuroNames:560") Annotation( ) "nucleus sensibilis superior nervi trigemini") AnnotationAssertion(Annotation( "NeuroNames:560") Annotation( ) "nucleus sensorius principalis nervi trigemini") AnnotationAssertion(Annotation( "NeuroNames:560") Annotation( ) "nucleus sensorius superior nervi trigemini") AnnotationAssertion(Annotation( ) Annotation( "GO:0021740") Annotation( ) "pontine nucleus") AnnotationAssertion(Annotation( "NeuroNames:560") "pontine nucleus of the trigeminal nerve") AnnotationAssertion(Annotation( "NeuroNames:560") "primary nucleus of the trigeminal nerve") AnnotationAssertion(Annotation( "NeuroNames:560") "principal sensory nucleus of the trigeminal") AnnotationAssertion(Annotation( "NeuroNames:560") "principal sensory nucleus of the trigeminal nerve") AnnotationAssertion( "UBERON:0002597") AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "GO has pontine nucleus as a child of trigeminal sensory nucleus, WP says this is a synonym, but we have a separate class for this - UBERON:0002151") AnnotationAssertion(rdfs:label "principal sensory nucleus of trigeminal nerve") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/3/30/Gray696.png"^^xsd:anyURI) SubClassOf(Annotation( "MA"^^xsd:string) ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "NIF"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (paracentral sulcus) AnnotationAssertion(Annotation( ) "The paracentral sulcus is a sulcus of the brain. It forms the paracentral lobule's anterior border.") AnnotationAssertion(Annotation( "BIRNLEX:1121") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "PCS") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:1121") AnnotationAssertion( "DHBA:10633") AnnotationAssertion( "FMA:83762") AnnotationAssertion( "HBA:9365") AnnotationAssertion(Annotation( "BIRNLEX:1121") "UMLS:C0228204") AnnotationAssertion(Annotation( "BIRNLEX:1121") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=70") AnnotationAssertion(Annotation( "BIRNLEX:1121") "sulcus subcentralis medialis") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:70") Annotation( ) "sulcus paracentralis") AnnotationAssertion( "UBERON:0002598") AnnotationAssertion(rdfs:label "paracentral sulcus") SubClassOf( ) # Class: (medial olfactory gyrus) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:MOG") AnnotationAssertion( "BIRNLEX:1127") AnnotationAssertion( "FMA:74509") AnnotationAssertion(Annotation( "BIRNLEX:1127") "UMLS:C0152331") AnnotationAssertion(Annotation( "BIRNLEX:1127") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=281") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:281") Annotation( ) "gyrus medius olfactorius") AnnotationAssertion(Annotation( "NeuroNames:281") Annotation( ) "gyrus olfactorius medialis") AnnotationAssertion( "UBERON:0002599") AnnotationAssertion(rdfs:label "medial olfactory gyrus") SubClassOf( ) DisjointClasses(Annotation( "NIFSTD"^^xsd:string) ) # Class: (limbic lobe) AnnotationAssertion(Annotation( "BIRNLEX:1128") "Part of cerebral hemisphere located on the medial surface, forming a ring around the brain stem.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:LL") AnnotationAssertion( "BAMS:Limbic_lobe") AnnotationAssertion( "BIRNLEX:1128") AnnotationAssertion( "CALOHA:TS-2061") AnnotationAssertion( "DHBA:12155") AnnotationAssertion( "FMA:72719") AnnotationAssertion( "HBA:4219") AnnotationAssertion(Annotation( "BIRNLEX:1128") "UMLS:C0458337") AnnotationAssertion(Annotation( "BIRNLEX:1128") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=834") AnnotationAssertion(Annotation( "FMA:72719") "fornicate gyrus") AnnotationAssertion( "grande lobe limbique of Broca") AnnotationAssertion( "limbic lobe (carpenter)") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:834") "fornicate convolution") AnnotationAssertion(Annotation( "NeuroNames:834") "fornicate lobe") AnnotationAssertion(Annotation( "NeuroNames:834") Annotation( ) "gyrus fornicatus") AnnotationAssertion(Annotation( ) Annotation( ) "lobus limbicus") AnnotationAssertion( "UBERON:0002600") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "limbic lobe") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/7/7e/Human_brain_inferior-medial_view_description.JPG"^^xsd:anyURI) SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (fasciolar gyrus) AnnotationAssertion(Annotation( ) Annotation( "BTO:0002497") "A small paired band that passes around the splenium of the corpus callosum from the lateral longitudinal stria to the dentate gyrus[Biology-Online]. A posterior and upward extension of the dentate gyrus, forming a transitional area between the dentate gyrus and the indusium griseum[BTO].") AnnotationAssertion( "TODO - existing definitions, synonyms and relationships in existing AOs seem contradictory; to be resolved. We take the dentate gyrus relationship from BTO, and it is also implied by the FMA synonym. However, FMA says archiortex (embryonic archicortex corresponds to the cortex of the dentate gyrus and hippocampus) and NIF says limbic lobe (which is more general than hippocampus). ABA xref made on basis of BTO related synonym") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:FAG") AnnotationAssertion( "BAMS:FG") AnnotationAssertion( "BIRNLEX:1129") AnnotationAssertion( "BTO:0002497") AnnotationAssertion( "DHBA:12175") AnnotationAssertion( "DMBA:112892265") AnnotationAssertion( "EMAPA:35339") AnnotationAssertion( "FMA:61921") AnnotationAssertion( "MA:0003127") AnnotationAssertion( "MBA:982") AnnotationAssertion(Annotation( "BIRNLEX:1129") "UMLS:C0152332") AnnotationAssertion(Annotation( "BIRNLEX:1129") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=176") AnnotationAssertion(Annotation( "FMA:61921") "retrosplenial gyrus of hippocampus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:176") Annotation( ) "FC") AnnotationAssertion(Annotation( ) Annotation( "BTO:0002497") "fasciola cinerea") AnnotationAssertion(Annotation( "NeuroNames:176") "fasciola cinerea (Reil, Arnold)") AnnotationAssertion(Annotation( "NeuroNames:176") "fasciola cinereum") AnnotationAssertion(Annotation( "BTO:0002497") "gyrus fasciolaris") AnnotationAssertion(Annotation( "NeuroNames:176") "gyrus fasciolaris") AnnotationAssertion(Annotation( "NeuroNames:176") Annotation( ) "gyrus retrosplenialis hippocampi") AnnotationAssertion(Annotation( "FMA:61921") "splenial gyrus") AnnotationAssertion( "UBERON:0002601") AnnotationAssertion(rdfs:label "fasciolar gyrus") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "NIFSTD"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (emboliform nucleus) AnnotationAssertion(Annotation( "ISBN:0-683-40008-8"^^xsd:string) Annotation( "MP:0009981") "The small wedge shaped nucleus interposed between the dentate and fastigial nuclei; it receives axons from Purkinje cells of the intermediate area of the cerebral hemispheres and most of its efferent connections travel via the superior cerebellar peduncle.") AnnotationAssertion( "UBERON:0004071") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:AInt") AnnotationAssertion( "BAMS:Emb") AnnotationAssertion( "BIRNLEX:1135") AnnotationAssertion( "BTO:0003837") AnnotationAssertion( "DHBA:12401") AnnotationAssertion( "DMBA:16930") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37821") AnnotationAssertion( "FMA:72538") AnnotationAssertion( "HBA:12947") AnnotationAssertion(Annotation( "BIRNLEX:1135") "UMLS:C0175488") AnnotationAssertion(Annotation( "BIRNLEX:1135") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=688") AnnotationAssertion(Annotation( "FMA:72538") "anterior interposed nucleus") AnnotationAssertion(Annotation( "FMA:72538") "anterior interpositus nucleus") AnnotationAssertion( "cerebellar emboliform nucleus") AnnotationAssertion(Annotation( "MP:0009981") "cerebellum emboliform nucleus") AnnotationAssertion( "embolus") AnnotationAssertion(Annotation( "DHBA:12401") "lateral interpositus (emboliform) nucleus") AnnotationAssertion(Annotation( "FMA:72538") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "nucleus interpositus anterior") AnnotationAssertion( "uberon") AnnotationAssertion( "lateral interpositus nucleus") AnnotationAssertion(Annotation( ) Annotation( ) "nucleus emboliformis") AnnotationAssertion(Annotation( "NeuroNames:688") Annotation( ) "nucleus emboliformis cerebelli") AnnotationAssertion(Annotation( "NeuroNames:688") Annotation( ) "nucleus interpositus anterior cerebelli") AnnotationAssertion( "UBERON:0002602") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "emboliform nucleus") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/2/23/Gray707.png"^^xsd:anyURI) SubClassOf( ) DisjointClasses(Annotation( "lexical"^^xsd:string) ) # Class: (paraterminal gyrus) AnnotationAssertion(Annotation( ) "The paraterminal gyrus (subcallosal gyrus, peduncle of the corpus callosum) is a narrow lamina on the medial surface of the hemisphere in front of the lamina terminalis, behind the parolfactory area, and below the rostrum of the corpus callosum. It is continuous around the genu of the corpus callosum with the supracallosal gyrus. [WP,unvetted].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:PTG") AnnotationAssertion( "BAMS:SuCG") AnnotationAssertion( "BIRNLEX:1138") AnnotationAssertion( "DHBA:12161") AnnotationAssertion( "FMA:61919") AnnotationAssertion( "HBA:4065") AnnotationAssertion(Annotation( "BIRNLEX:1138") "UMLS:C0175231") AnnotationAssertion(Annotation( "BIRNLEX:1138") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=171") AnnotationAssertion(Annotation( "FMA:61919") "precommissural hippocampus") AnnotationAssertion(Annotation( "FMA:61919") "subcallosal gyrus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "gyrus paraterminalis") AnnotationAssertion(Annotation( ) Annotation( ) "gyrus subcallosus") AnnotationAssertion(Annotation( "NeuroNames:171") Annotation( ) "hippocampus praecommissuralis") AnnotationAssertion(Annotation( "NeuroNames:171") Annotation( ) "hippocampus precommissuralis") AnnotationAssertion(Annotation( "NeuroNames:171") "paraterminal body (Noback)") AnnotationAssertion(Annotation( "NeuroNames:171") "peduncle of the corpus callosum") AnnotationAssertion( "UBERON:0002603") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "paraterminal gyrus") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/4/4d/Gray732.png"^^xsd:anyURI) SubClassOf( ) # Class: (ventral nucleus of lateral lemniscus) AnnotationAssertion(Annotation( ) "The lateral lemniscus is a tract of axons in the brainstem that carries information about sound from the cochlear nucleus to various brainstem nuclei and ultimately the contralateral inferior colliculus of the midbrain. Three distinct, primarily inhibitory, cellular groups are located interspersed within these fibers, and are thus named the nuclei of the lateral lemniscus. [WP,unvetted].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:NLLv") AnnotationAssertion( "BAMS:VLL") AnnotationAssertion( "BIRNLEX:1140") AnnotationAssertion( "BM:LLV") AnnotationAssertion( "DHBA:12457") AnnotationAssertion( "FMA:72484") AnnotationAssertion( "HBA:9200") AnnotationAssertion( "MBA:99") AnnotationAssertion(Annotation( "BIRNLEX:1140") "UMLS:C0175444") AnnotationAssertion(Annotation( "BIRNLEX:1140") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=592") AnnotationAssertion(Annotation( "FMA:72484") "anterior nucleus of lateral lemniscus") AnnotationAssertion(Annotation( "FMA:72484") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "nucleus anterior lemnisci lateralis") AnnotationAssertion(Annotation( "ABA:NLLv") "nucleus of the lateral lemniscus, ventral part") AnnotationAssertion(Annotation( "FMA:72484") "ventral nucleus of the lateral lemniscus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:592") Annotation( ) "nucleus lemnisci lateralis pars ventralis") AnnotationAssertion(Annotation( "NeuroNames:592") Annotation( ) "nucleus lemnisci lateralis ventralis") AnnotationAssertion(Annotation( "BAMS:NLLv") "nucleus of the lateral lemniscus ventral part") AnnotationAssertion( "UBERON:0002604") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "ventral nucleus of lateral lemniscus") AnnotationAssertion( "Lateral:lemniscus.PNG"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) Annotation( "NIF"^^xsd:string) ObjectSomeValuesFrom( )) DisjointClasses(Annotation( "lexical"^^xsd:string) ) # Class: (precentral operculum) AnnotationAssertion(Annotation( "BIRNLEX:1141") "The ventrolateral lip of the precentral gyrus, which overlies the insula and is bounded by the lateral fissure (Brain Info).") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:pro") AnnotationAssertion( "BIRNLEX:1141") AnnotationAssertion( "FMA:74888") AnnotationAssertion(Annotation( "BIRNLEX:1141") "UMLS:C0694581") AnnotationAssertion(Annotation( "BIRNLEX:1141") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=2395") AnnotationAssertion(Annotation( "FMA:74888") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "operculum precentrale") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:2395") "brodmann's area 6") AnnotationAssertion( "UBERON:0002605") AnnotationAssertion(rdfs:label "precentral operculum") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (neuropil) AnnotationAssertion(Annotation( ) "A cluster of neurites that is part of a nervous system and forms a network of dendrites and axons where synapses are present and in which neuronal somata do not occur.") AnnotationAssertion(Annotation( "FBC:BrainName") "Multi-cell component structure of the central nervous system consisting largely of neuron projections (tracts and synaptic neuropil domains) and associated glial cells. This corresponds to the part of the CNS that is enclosed by the cortex.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:1142") AnnotationAssertion( "BTO:0005268") AnnotationAssertion( "CALOHA:TS-2403") AnnotationAssertion( "FBbt:00005139") AnnotationAssertion( "FMA:261269") AnnotationAssertion( "GAID:740") AnnotationAssertion( "MESH:D019581") AnnotationAssertion( "NCIT:C12617") AnnotationAssertion( "NIF_Subcellular:sao205380252") AnnotationAssertion(Annotation( "ncithesaurus:Neuropil") "UMLS:C0228081") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "neuropilus") AnnotationAssertion( "UBERON:0002606") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "neuropil") SubClassOf( ) # Class: (superior rostral sulcus) AnnotationAssertion(Annotation( "BIRNLEX:1143") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "SROS") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:sros") AnnotationAssertion( "BIRNLEX:1143") AnnotationAssertion( "DHBA:146034840") AnnotationAssertion( "FMA:83766") AnnotationAssertion( "HBA:9366") AnnotationAssertion(Annotation( "BIRNLEX:1143") "UMLS:C0694583") AnnotationAssertion(Annotation( "BIRNLEX:1143") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=74") AnnotationAssertion(Annotation( "BIRNLEX:1143") "sulcus rostralis superior") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002607") AnnotationAssertion(rdfs:label "superior rostral sulcus") SubClassOf( ) # Class: (caudal part of ventral lateral nucleus) AnnotationAssertion(Annotation( "BIRNLEX:1144") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "VLC") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:VLC") AnnotationAssertion( "BIRNLEX:1144") AnnotationAssertion( "DHBA:10422") AnnotationAssertion( "FMA:62194") AnnotationAssertion(Annotation( "BIRNLEX:1144") "UMLS:C0175281") AnnotationAssertion(Annotation( "BIRNLEX:1144") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=339") AnnotationAssertion( "dorsal part of ventral lateral posterior nucleus (jones)") AnnotationAssertion(Annotation( "BIRNLEX:1144") "nucleus dorsooralis (van buren)") AnnotationAssertion(Annotation( "BIRNLEX:1144") "nucleus lateralis intermedius mediodorsalis situs dorsalis") AnnotationAssertion(Annotation( "BIRNLEX:1144") "nucleus ventralis lateralis, pars caudalis") AnnotationAssertion(Annotation( "FMA:62194") "ventral lateral nucleus, caudal part") AnnotationAssertion(Annotation( "FMA:62194") "ventral lateral thalamic nucleus, caudal part") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:339") "caudal part of the ventral lateral nucleus") AnnotationAssertion( "UBERON:0002608") AnnotationAssertion(rdfs:label "caudal part of ventral lateral nucleus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (spinothalamic tract of midbrain) AnnotationAssertion(Annotation( "BIRNLEX:1150") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "STMB") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:stmb") AnnotationAssertion( "BIRNLEX:1150") AnnotationAssertion( "FMA:72463") AnnotationAssertion(Annotation( "BIRNLEX:1150") "UMLS:C0152376") AnnotationAssertion(Annotation( "BIRNLEX:1150") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=535") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:535") "spinothalamic tract of the midbrain") AnnotationAssertion(Annotation( "NeuroNames:535") Annotation( ) "tractus spinothalamicus (mesencephali)") AnnotationAssertion( "UBERON:0002609") AnnotationAssertion(rdfs:label "spinothalamic tract of midbrain") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (cochlear nuclear complex) AnnotationAssertion(Annotation( ) "The cochlear nuclei consist of: (a) the dorsal cochlear nucleus, corresponding to the tuberculum acusticum on the dorso-lateral surface of the inferior peduncle; and (b) the ventral or accessory cochlear nucleus, placed between the two divisions of the nerve, on the ventral aspect of the inferior peduncle. [WP,unvetted].") AnnotationAssertion( "WP says 'The CN is located at the dorso-lateral side of the brainstem, spanning the junction of the pons and medulla.'. MA places this in pons, other sources the medulla") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:CN") AnnotationAssertion( "BIRNLEX:1151") AnnotationAssertion( "BM:Me-Co") AnnotationAssertion( "DHBA:12437") AnnotationAssertion( "EV:0100260") AnnotationAssertion( "FMA:72240") AnnotationAssertion( "HBA:9528") AnnotationAssertion( "MBA:607") AnnotationAssertion(Annotation( "BIRNLEX:1151") "UMLS:C0152411") AnnotationAssertion(Annotation( "ncithesaurus:Cochlear_Nuclei") "UMLS:C0152411") AnnotationAssertion(Annotation( "BIRNLEX:1151") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=720") AnnotationAssertion(Annotation( "FMA:72240") "cochlear nuclei") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "nuclei cochleares") AnnotationAssertion( "UBERON:0002610") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "cochlear nuclear complex") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/5/52/Gray691.png"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "MA") Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (obsolete node of ranvier) AnnotationAssertion(Annotation( "GO") "in GO") AnnotationAssertion( "BIRNLEX:1152") AnnotationAssertion( "FMA:67368") AnnotationAssertion( "GAID:748") AnnotationAssertion( "GO:0033268") AnnotationAssertion( "NCIT:C33172") AnnotationAssertion( ) AnnotationAssertion(Annotation( "FMA:67368") "ranvier node") AnnotationAssertion(Annotation( "FMA:67368") "ranvier's node") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002611") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "obsolete node of ranvier") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (transverse orbital sulcus) AnnotationAssertion(Annotation( "BIRNLEX:1155") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "TOS") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:tos") AnnotationAssertion( "BIRNLEX:1155") AnnotationAssertion( "DHBA:13223") AnnotationAssertion( "FMA:83771") AnnotationAssertion(Annotation( "BIRNLEX:1155") "UMLS:C0262349") AnnotationAssertion(Annotation( "BIRNLEX:1155") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=80") AnnotationAssertion(Annotation( "BIRNLEX:1155") "sulcus orbitalis transversus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002612") AnnotationAssertion(rdfs:label "transverse orbital sulcus") SubClassOf( ) # Class: (cerebellum globose nucleus) AnnotationAssertion(Annotation( "MP:0009982") "The two or three small masses of gray matter that is located medial to the emboliform nucleus and lateral to the fastigial nucleus; it receives axons from the intermediate area of the cerebellar hemispheres and its afferents exit through the superior cerebellar peduncle.") AnnotationAssertion(Annotation( "BIRNLEX:1158") "One of two nuclei comprising the interpositus cerebellar nuclear complex of the deep cerebellar nuclei.") AnnotationAssertion(Annotation( ) "The globose nucleus is one of the deep cerebellar nuclei. It is located medial to the emboliform nucleus and lateral to the fastigial nucleus. This nucleus contains primarily large and small multipolar neurons. The globose nucleus and emboliform nucleus are occasionally referred to collectively as the interposed nucleus. [WP,unvetted][Wikipedia:Globose_nucleus].") AnnotationAssertion(Annotation( "NIF"^^xsd:string) "It is recognized in human cerebellum but is not distinguishable in all mammalian species") AnnotationAssertion( "it is recognized in human cerebellum but is not distinguishable in all mammalian species[MP]") AnnotationAssertion( "UBERON:0004072") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:Glo") AnnotationAssertion( "BIRNLEX:1158") AnnotationAssertion( "BTO:0003838") AnnotationAssertion( "DHBA:12400") AnnotationAssertion( "DMBA:16932") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37820") AnnotationAssertion( "FMA:72536") AnnotationAssertion( "HBA:12949") AnnotationAssertion(Annotation( "BIRNLEX:1158") "UMLS:C0175489") AnnotationAssertion(Annotation( "BIRNLEX:1158") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=689") AnnotationAssertion(Annotation( "FMA:72536") "globose nucleus") AnnotationAssertion( "medial interposed nucleus") AnnotationAssertion(Annotation( "DHBA:12400") "medial interpositus (globose) nucleus") AnnotationAssertion( "medial interpositus nucleus") AnnotationAssertion(Annotation( "FMA:72536") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "nucleus interpositus posterior") AnnotationAssertion(Annotation( "FMA:72536") "posterior interposed nucleus") AnnotationAssertion(Annotation( "FMA:72536") "posterior interpositus nucleus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:689") Annotation( ) "nuclei globosi") AnnotationAssertion(Annotation( ) Annotation( ) "nucleus globosus") AnnotationAssertion(Annotation( "NeuroNames:689") Annotation( ) "nucleus globosus cerebelli") AnnotationAssertion(Annotation( "NeuroNames:689") Annotation( ) "nucleus interpositus posterior cerebelli") AnnotationAssertion( "UBERON:0002613") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "cerebellum globose nucleus") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/2/23/Gray707.png"^^xsd:anyURI) SubClassOf( ) # Class: (medial part of ventral lateral nucleus) AnnotationAssertion(Annotation( "BIRNLEX:1159") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "VLM") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:VLM") AnnotationAssertion( "BAMS:VM") AnnotationAssertion( "BIRNLEX:1159") AnnotationAssertion( "BM:Die-Th-VM") AnnotationAssertion( "DHBA:10427") AnnotationAssertion( "FMA:62195") AnnotationAssertion( "HBA:4421") AnnotationAssertion( "MBA:685") AnnotationAssertion(Annotation( "BIRNLEX:1159") "UMLS:C0175282") AnnotationAssertion(Annotation( "BIRNLEX:1159") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=340") AnnotationAssertion(Annotation( "BIRNLEX:1159") "nucleus ventralis lateralis thalami, pars medialis") AnnotationAssertion(Annotation( "BIRNLEX:1159") "nucleus ventrooralis medialis (Hassler)") AnnotationAssertion(Annotation( "FMA:62195") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "vMp (Macchi)") AnnotationAssertion(Annotation( "FMA:62195") "ventral lateral nucleus, medial part") AnnotationAssertion(Annotation( "FMA:62195") "ventral medial nucleus") AnnotationAssertion(Annotation( "BIRNLEX:1159") "ventral medial nucleus of thalamus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:340") "medial part of the ventral lateral nucleus") AnnotationAssertion(Annotation( "NeuroNames:340") Annotation( ) "nucleus ventralis lateralis, pars medialis") AnnotationAssertion(Annotation( "BAMS:VM") "ventral medial nucleus of the thalamus") AnnotationAssertion(Annotation( "BAMS:VM") "ventromedial nucleus of thalamus") AnnotationAssertion(Annotation( "BAMS:VM") "ventromedial nucleus of the thalamus") AnnotationAssertion(Annotation( "BAMS:VM") "ventromedial thalamic nucleus") AnnotationAssertion( "UBERON:0002614") AnnotationAssertion(rdfs:label "medial part of ventral lateral nucleus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (ventral tegmental decussation) AnnotationAssertion(Annotation( "BIRNLEX:1163") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "VTGX") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:vtd") AnnotationAssertion( "BAMS:vtgx") AnnotationAssertion( "BIRNLEX:1163") AnnotationAssertion( "DHBA:12366") AnnotationAssertion( "DMBA:17807") AnnotationAssertion( "FMA:72452") AnnotationAssertion( "MBA:397") AnnotationAssertion(Annotation( "BIRNLEX:1163") "UMLS:C0152371") AnnotationAssertion(Annotation( "BIRNLEX:1163") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=524") AnnotationAssertion(Annotation( "FMA:72452") "anterior tegmental decussation") AnnotationAssertion(Annotation( "FMA:72452") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "decussatio tegmentalis anterior") AnnotationAssertion( "decussation of forel") AnnotationAssertion( "ventral tegmental decussation of forel") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:524") Annotation( ) "decussatio inferior (Forel)") AnnotationAssertion(Annotation( "NeuroNames:524") Annotation( ) "decussatio tegmenti ventralis") AnnotationAssertion(Annotation( "NeuroNames:524") Annotation( ) "decussatio ventralis tegmenti") AnnotationAssertion(Annotation( "NeuroNames:524") "inferior decussation (Forel's decussation)") AnnotationAssertion(Annotation( "NeuroNames:524") "ventral tegmental decussation (Forel)") AnnotationAssertion( "UBERON:0002615") AnnotationAssertion(rdfs:label "ventral tegmental decussation") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses(Annotation( "lexical"^^xsd:string) ) # Class: (regional part of brain) AnnotationAssertion(Annotation( "BIRNLEX:1167") "Anatomical divisons of the brain according to one or more criteria, e.g. cytoarchitectural, gross anatomy. Parts may be contiguous in 3D or not, e.g., basal ganglia.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:1167") AnnotationAssertion( "FMA:55676") AnnotationAssertion( "NCIT:C13031") AnnotationAssertion(Annotation( "ncithesaurus:Brain_Part") "UMLS:C0445620") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "anatomical structure of brain") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "biological structure of brain") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "brain anatomical structure") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "brain biological structure") AnnotationAssertion( "brain part") AnnotationAssertion(Annotation( "FMA:55676") "neuraxis segment") AnnotationAssertion( "neuroanatomical region") AnnotationAssertion(Annotation( "BIRNLEX:1167") "segment of brain") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002616") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "regional part of brain") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pars postrema of ventral lateral nucleus) AnnotationAssertion(Annotation( "BIRNLEX:1170") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "VLP") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:VLP") AnnotationAssertion( "BIRNLEX:1170") AnnotationAssertion( "DMBA:15612") AnnotationAssertion( "FMA:62196") AnnotationAssertion( "HBA:4423") AnnotationAssertion( "MBA:689") AnnotationAssertion(Annotation( "BIRNLEX:1170") "UMLS:C0262304") AnnotationAssertion(Annotation( "BIRNLEX:1170") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=341") AnnotationAssertion(Annotation( "BIRNLEX:1170") "nucleus dorsointermedius externus magnocellularis (hassler)") AnnotationAssertion(Annotation( "BIRNLEX:1170") "nucleus lateralis intermedius mediodorsalis situs postremus") AnnotationAssertion(Annotation( "BIRNLEX:1170") "nucleus ventralis lateralis thalami, pars postrema") AnnotationAssertion( "posterodorsal part of ventral lateral posterior nucleus (jones)") AnnotationAssertion(Annotation( "FMA:62196") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "vLps") AnnotationAssertion(Annotation( "FMA:62196") "ventral lateral nucleus (pars postrema)") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:341") Annotation( ) "nucleus ventralis lateralis, pars postrema") AnnotationAssertion(Annotation( "NeuroNames:341") "pars postrema of the ventral lateral nucleus") AnnotationAssertion(Annotation( "BAMS:VLP") "ventrolateral posterior thalamic nucleus") AnnotationAssertion(Annotation( "BAMS:VLP") "ventrolateral preoptic nucleus") AnnotationAssertion( "UBERON:0002617") AnnotationAssertion(rdfs:label "pars postrema of ventral lateral nucleus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (root of trochlear nerve) AnnotationAssertion( "UBERON:0002674") AnnotationAssertion(Annotation( "BIRNLEX:1172") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "4nf") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:4n") AnnotationAssertion( "BAMS:4nf") AnnotationAssertion( "BIRNLEX:1172") AnnotationAssertion( "BIRNLEX:1341") AnnotationAssertion( "DHBA:12377") AnnotationAssertion( "DMBA:17737") AnnotationAssertion( "FMA:71116") AnnotationAssertion(Annotation( "BIRNLEX:1172") "UMLS:C0175374") AnnotationAssertion(Annotation( "BIRNLEX:1172") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=486") AnnotationAssertion(Annotation( "FMA:71116") "central part of trochlear nerve") AnnotationAssertion(Annotation( "FMA:71116") "trochlear nerve fibers") AnnotationAssertion(Annotation( "FMA:71116") "trochlear nerve root") AnnotationAssertion(Annotation( "FMA:71116") "trochlear nerve tract") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:486") Annotation( ) "fibrae nervi trochlearis") AnnotationAssertion(Annotation( "BAMS:4n") "trochlear nerve or its root") AnnotationAssertion(Annotation( "BAMS:4n") "trochlear nerve/root") AnnotationAssertion( "UBERON:0002618") AnnotationAssertion(rdfs:label "root of trochlear nerve") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete regional part of cerebral cortex) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A regional part of brain that is part of a cerebral cortex [Automatically generated definition].") AnnotationAssertion( "TODO - check MA term") AnnotationAssertion( "BIRNLEX:1173") AnnotationAssertion( "EMAPA:35589") AnnotationAssertion( "FMA:242193") AnnotationAssertion( "MA:0000187") AnnotationAssertion( "SCTID:119408004") AnnotationAssertion( "UBERON:0003208") AnnotationAssertion( "cerebral cortex part") AnnotationAssertion(Annotation( "MA:0000187") "neocortex region") AnnotationAssertion(Annotation( "FMA:242193") "region of cerebral cortex") AnnotationAssertion(Annotation( "BIRNLEX:1173") "segment of cerebral cortex") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "MA:0000187") "cerebral cortex region") AnnotationAssertion( "UBERON:0002619") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "obsolete regional part of cerebral cortex") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (tuber cinereum) AnnotationAssertion(Annotation( ) Annotation( "BIRNLEX:1189") "Part of hypothalamus consisting of hollow eminence of gray matter situated between the mammilary bodies and the optic chiasm visible on the basal surface of the brain (adapted from Wikipedia).") AnnotationAssertion(Annotation( "BIRNLEX:1189") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "TBCN") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:TuCn") AnnotationAssertion( "BAMS:tbcn") AnnotationAssertion( "BIRNLEX:1189") AnnotationAssertion( "DHBA:10647") AnnotationAssertion( "DMBA:15665") AnnotationAssertion( "EMAPA:35420") AnnotationAssertion( "FMA:62327") AnnotationAssertion( "GAID:649") AnnotationAssertion( "HBA:4633") AnnotationAssertion( "MA:0000844") AnnotationAssertion( "MESH:A08.186.211.730.385.357.352.870") AnnotationAssertion( "NCIT:C33817") AnnotationAssertion(Annotation( "BIRNLEX:1189") "UMLS:C0041283") AnnotationAssertion(Annotation( "ncithesaurus:Tuber_Cinereum") "UMLS:C0041283") AnnotationAssertion(Annotation( "BIRNLEX:1189") "UMLS:C1284640") AnnotationAssertion(Annotation( "BIRNLEX:1189") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=393") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:1782") "tuber cinereum area") AnnotationAssertion(Annotation( "NeuroNames:1782") "tuberal area") AnnotationAssertion(Annotation( "NeuroNames:1782") "tuberal area of hypothalamus") AnnotationAssertion(Annotation( "NeuroNames:1782") "tuberal area, hypothalamus") AnnotationAssertion(Annotation( "MA:0000844") "tuberal nucleus") AnnotationAssertion(Annotation( "MA:0000844") "tuberal region") AnnotationAssertion(Annotation( ) "tubercle of Rolando") AnnotationAssertion( "UBERON:0002620") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "tuber cinereum") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/d/d7/Gray724.png"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "MA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (obsolete regional part of cochlear nuclear complex) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A regional part of brain that is part of a cochlear nuclear complex [Automatically generated definition].") AnnotationAssertion( "BIRNLEX:1195") AnnotationAssertion( "FMA:83952") AnnotationAssertion(Annotation( "FMA:83952") "cochlear nuclear complex segment") AnnotationAssertion(Annotation( "BIRNLEX:1195") "segment of cochlear nuclear complex") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002621") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "obsolete regional part of cochlear nuclear complex") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (preoptic periventricular nucleus) AnnotationAssertion(Annotation( ) "The preoptic periventricular nucleus is located along the midline and is medial to the medial preoptic nucleus.[WP,unvetted].") AnnotationAssertion(Annotation( "BIRNLEX:1201") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "POP") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:POP") AnnotationAssertion( "BAMS:PVpo") AnnotationAssertion( "BIRNLEX:1201") AnnotationAssertion( "FMA:62324") AnnotationAssertion( "HBA:4549") AnnotationAssertion( "MBA:133") AnnotationAssertion(Annotation( "BIRNLEX:1201") "UMLS:C0175314") AnnotationAssertion(Annotation( "BIRNLEX:1201") "UMLS:C1289554") AnnotationAssertion(Annotation( "BIRNLEX:1201") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=379") AnnotationAssertion(Annotation( "FMA:62324") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "nucleus preopticus periventricularis") AnnotationAssertion(Annotation( "FMA:62324") "periventricular preoptic nucleus") AnnotationAssertion(Annotation( "FMA:62324") "preoptic periventricular hypothalamic nucleus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:379") "dorsal periventricular hypothalamic nucleus") AnnotationAssertion(Annotation( "NeuroNames:379") Annotation( ) "nucleus periventricularis hypothalami, pars dorsalis") AnnotationAssertion(Annotation( "NeuroNames:379") Annotation( ) "nucleus periventricularis praeopticus") AnnotationAssertion(Annotation( "NeuroNames:379") Annotation( ) "nucleus periventricularis preopticus") AnnotationAssertion(Annotation( "BAMS:PVpo") "periventricular hypothalamic nucleus, preoptic part") AnnotationAssertion(Annotation( "NeuroNames:379") "periventricular nucleus, anterior portion") AnnotationAssertion( "UBERON:0002622") AnnotationAssertion(rdfs:label "preoptic periventricular nucleus") SubClassOf( ) # Class: (cerebral peduncle) AnnotationAssertion(Annotation( "BIRNLEX:1202") "Synonym for macrodissected adult human tegmentum (Vicq d'Azyr, 1784; Swanson, 2000); pp. 555-556. Later used thus by for example His (1893b, p. 178), Herrick (1915, p. 160), Strong & Elwyn (1943, p. 17), Carpenter (1976, p. 367), Williams & Warwick (1980, p. 935).") AnnotationAssertion(Annotation( "BIRNLEX:1202") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "CP") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:cpd") AnnotationAssertion( "BIRNLEX:1202") AnnotationAssertion( "BM:CP") AnnotationAssertion( "BTO:0004676") AnnotationAssertion( "EFO:0001987") AnnotationAssertion( "FMA:62394") AnnotationAssertion( "MBA:924") AnnotationAssertion( "NCIT:C32291") AnnotationAssertion(Annotation( "BIRNLEX:1202") "UMLS:C0007793") AnnotationAssertion(Annotation( "ncithesaurus:Cerebral_Peduncle") "UMLS:C0007793") AnnotationAssertion(Annotation( "BIRNLEX:1202") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=487") AnnotationAssertion(Annotation( "FMA:62394") "cerebral peduncle") AnnotationAssertion(Annotation( "FMA:62394") "peduncle of midbrain") AnnotationAssertion(Annotation( "FMA:62394") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "pedunculus cerebri") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:487") "cerebal peduncle") AnnotationAssertion(Annotation( "NeuroNames:487") "cerebral peduncle (archaic)") AnnotationAssertion(Annotation( "NeuroNames:487") Annotation( ) "pedunculi cerebri") AnnotationAssertion(Annotation( "NeuroNames:487") Annotation( ) "pedunculus cerebralis") AnnotationAssertion(Annotation( ) Annotation( ) "pedunculus cerebri") AnnotationAssertion( "tegmentum") AnnotationAssertion( "UBERON:0002623") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "Neuronames includes the substantia nigra, crus cerebri and midbrain tegmentum as substructures of the cerebral peduncle; the mouse atlases only include the crus cerebri as the cerebral peduncle (MM)") AnnotationAssertion(rdfs:label "cerebral peduncle") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/e/e9/Gray689.png"^^xsd:anyURI) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (orbital part of inferior frontal gyrus) AnnotationAssertion(Annotation( "BIRNLEX:1207") "Component of the inferior frontal gyrus.defined as the first gyrus from the precentral gyrus.the remainder of the inferior frontal gyrus once the pars opercularis and triangularis have been defined (Christine Fennema-Notestine)., NeuroNames.") AnnotationAssertion(Annotation( ) "pars orbitalis, inferior frontal gyrus") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:IFGOr") AnnotationAssertion( "BAMS:OrIFG") AnnotationAssertion( "BIRNLEX:1207") AnnotationAssertion( "DHBA:12120") AnnotationAssertion( "FMA:61982") AnnotationAssertion( "HBA:4044") AnnotationAssertion( "NCIT:C33221") AnnotationAssertion(Annotation( "BIRNLEX:1207") "UMLS:C0262300") AnnotationAssertion(Annotation( "ncithesaurus:Orbital_Part_of_the_Inferior_Frontal_Gyrus") "UMLS:C0262300") AnnotationAssertion(Annotation( "BIRNLEX:1207") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=2410") AnnotationAssertion(Annotation( "FMA:61982") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "gyrus frontalis inferior, pars orbitalis") AnnotationAssertion(Annotation( "FMA:61982") "inferior frontal gyrus, orbital part") AnnotationAssertion(Annotation( "BIRNLEX:1207") "pars orbitalis gyri frontalis inferioris") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:2410") "brodmann's area 36") AnnotationAssertion( "UBERON:0002624") AnnotationAssertion(rdfs:label "orbital part of inferior frontal gyrus") SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (median preoptic nucleus) AnnotationAssertion(Annotation( ) "The median preoptic nucleus is located along the midline in a position significantly dorsal to the other 3 preoptic nuclei, at least in the macaca fascicularis brain. It wraps around the top (dorsal), front, and bottom (ventral) surfaces of the anterior commissure. The median preoptic nucleus generates thirst. Drinking decreases noradrenaline release in the median preoptic nucleus.") AnnotationAssertion(Annotation( "BIRNLEX:1208") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "MnPO") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:MEPO") AnnotationAssertion( "BAMS:MnPO") AnnotationAssertion( "BIRNLEX:1208") AnnotationAssertion( "BM:MPO") AnnotationAssertion( "DHBA:13063") AnnotationAssertion( "FMA:62323") AnnotationAssertion( "HBA:4548") AnnotationAssertion( "MBA:452") AnnotationAssertion(Annotation( "BIRNLEX:1208") "UMLS:C0259793") AnnotationAssertion(Annotation( "BIRNLEX:1208") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=378") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:378") "median preoptic nucleus (Loo)") AnnotationAssertion(Annotation( "NeuroNames:378") Annotation( ) "nucleus praeopticus medianus") AnnotationAssertion(Annotation( "NeuroNames:378") Annotation( ) "nucleus preopticus medianus") AnnotationAssertion(Annotation( "NeuroNames:378") "periventricular nucleus, preventricular portion") AnnotationAssertion( "UBERON:0002625") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "median preoptic nucleus") SubClassOf( ) # Class: (head of caudate nucleus) AnnotationAssertion(Annotation( "BIRNLEX:1212") "Largest part of the caudate nucleus lying lateral to and protruding into the anterior of the lateral ventricle.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:HCd") AnnotationAssertion( "BIRNLEX:1212") AnnotationAssertion( "DHBA:10335") AnnotationAssertion( "EMAPA:18547") AnnotationAssertion( "FMA:61852") AnnotationAssertion( "HBA:12900") AnnotationAssertion(Annotation( "BIRNLEX:1212") "UMLS:C0152336") AnnotationAssertion(Annotation( "BIRNLEX:1212") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=227") AnnotationAssertion(Annotation( "FMA:61852") "caput (caudatus)") AnnotationAssertion(Annotation( "FMA:61852") "caudate nuclear head") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:227") Annotation( ) "caput nuclei caudati") AnnotationAssertion(Annotation( "NeuroNames:227") "head of the caudate nucleus") AnnotationAssertion( "UBERON:0002626") AnnotationAssertion(rdfs:label "head of caudate nucleus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (capsule of medial geniculate body) AnnotationAssertion( ) AnnotationAssertion( "BAMS:cmg") AnnotationAssertion( "BIRNLEX:1214") AnnotationAssertion( "FMA:62049") AnnotationAssertion(Annotation( "BIRNLEX:1214") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=359") AnnotationAssertion(Annotation( "BIRNLEX:1214") "capsula corporis geniculati medialis") AnnotationAssertion(Annotation( "FMA:62049") "medial geniculate body capsule") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:359") "capsule of the medial geniculate body") AnnotationAssertion( "UBERON:0002627") AnnotationAssertion(rdfs:label "capsule of medial geniculate body") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (tail of caudate nucleus) AnnotationAssertion(Annotation( "BIRNLEX:1215") "Narrowest part of the caudate nucleus, roughtly defined as that portion that curves ventrally from the body of the caudate nucleus, following the temporal horn of the lateral ventricle.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:TCd") AnnotationAssertion( "BIRNLEX:1215") AnnotationAssertion( "DHBA:10337") AnnotationAssertion( "EMAPA:18548") AnnotationAssertion( "FMA:61854") AnnotationAssertion( "HBA:12901") AnnotationAssertion(Annotation( "BIRNLEX:1215") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=229") AnnotationAssertion(Annotation( "FMA:61854") "caudate nuclear tail") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:229") Annotation( ) "cauda (caudatus)") AnnotationAssertion(Annotation( "NeuroNames:229") Annotation( ) "cauda nuclei caudati") AnnotationAssertion(Annotation( "NeuroNames:229") "tail of the caudate nucleus") AnnotationAssertion( "UBERON:0002628") AnnotationAssertion(rdfs:label "tail of caudate nucleus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (triangular part of inferior frontal gyrus) AnnotationAssertion(Annotation( "BIRNLEX:1216") "Component of the inferior frontal gyrus.defined as the second gyrus from the precentral gyrus (Christine Fennema-Notestine).") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:IFGTr") AnnotationAssertion( "BAMS:TrIFG") AnnotationAssertion( "BIRNLEX:1216") AnnotationAssertion( "DHBA:12118") AnnotationAssertion( "FMA:61980") AnnotationAssertion( "HBA:4038") AnnotationAssertion( "NCIT:C33811") AnnotationAssertion(Annotation( "BIRNLEX:1216") "UMLS:C0262350") AnnotationAssertion(Annotation( "ncithesaurus:Triangular_Part_of_the_Inferior_Frontal_Gyrus") "UMLS:C0262350") AnnotationAssertion(Annotation( "BIRNLEX:1216") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=86") AnnotationAssertion(Annotation( "FMA:61980") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "gyrus frontalis inferior, pars triangularis") AnnotationAssertion(Annotation( "FMA:61980") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "pars triangularis") AnnotationAssertion(Annotation( "BIRNLEX:1216") "pars triangularis gyri frontalis inferioris") AnnotationAssertion(Annotation( "FMA:61980") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "pars triangularis of frontal operculum (Ono)") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "inferior frontal gyrus, pars triangularis") AnnotationAssertion(Annotation( "BAMS:IFGTr") "inferior frontal gyrus, triangular part") AnnotationAssertion( "UBERON:0002629") AnnotationAssertion(rdfs:label "triangular part of inferior frontal gyrus") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (body of caudate nucleus) AnnotationAssertion(Annotation( "BIRNLEX:1217") "Part of caudate nucleus lying just dorsal to the thalamus.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:BCd") AnnotationAssertion( "BIRNLEX:1217") AnnotationAssertion( "DHBA:10336") AnnotationAssertion( "FMA:61853") AnnotationAssertion( "HBA:12899") AnnotationAssertion(Annotation( "BIRNLEX:1217") "UMLS:C0152338") AnnotationAssertion(Annotation( "BIRNLEX:1217") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=228") AnnotationAssertion(Annotation( "FMA:61853") "caudate nuclear body") AnnotationAssertion(Annotation( "FMA:61853") "corpus (caudatus)") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:228") "body of the caudate nucleus") AnnotationAssertion(Annotation( "FMA:61853") "caudate body") AnnotationAssertion(Annotation( "NeuroNames:228") Annotation( ) "corpus nuclei caudati") AnnotationAssertion( "UBERON:0002630") AnnotationAssertion(rdfs:label "body of caudate nucleus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (cerebral crus) AnnotationAssertion(Annotation( ) "The cerebral crus is the anterior portion of the cerebral peduncle which contains the motor tracts, the plural of which is cerebral crura. In some older texts, it is used as a synonym for the entire cerebral peduncle, not just the anterior portion of it. [WP,unvetted].") AnnotationAssertion(Annotation( "BIRNLEX:1218") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "CCR") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:cp") AnnotationAssertion( "BIRNLEX:1218") AnnotationAssertion( "BTO:0004677") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37499") AnnotationAssertion( "EV:0100243") AnnotationAssertion( "FMA:72464") AnnotationAssertion( "MA:0001056") AnnotationAssertion( "NCIT:C32409") AnnotationAssertion(Annotation( "BIRNLEX:1218") "UMLS:C0175414") AnnotationAssertion(Annotation( "BIRNLEX:1218") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=539") AnnotationAssertion(Annotation( "FMA:72464") "cerebral peduncle (clinical definition)") AnnotationAssertion(Annotation( "MA:0001056") "crura cerebri") AnnotationAssertion(Annotation( "EV:0100243") "crus cerebri") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0004677") "base of cerebral peduncle") AnnotationAssertion(Annotation( "NeuroNames:539") Annotation( ) "basis cerebri (Oertel)") AnnotationAssertion(Annotation( "NeuroNames:539") Annotation( ) "basis pedunculi (Oertel)") AnnotationAssertion(Annotation( "NeuroNames:539") Annotation( ) "basis pedunculi cerebri (Willis)") AnnotationAssertion(Annotation( "NeuroNames:539") "cerebral peduncle, basal part") AnnotationAssertion(Annotation( ) Annotation( ) "crus cerebri") AnnotationAssertion(Annotation( "BTO:0004677") "crus cerebri") AnnotationAssertion(Annotation( "NeuroNames:539") "crus of the cerebral peduncle") AnnotationAssertion(Annotation( "NeuroNames:539") Annotation( ) "pars neo-encephalica pedunculi") AnnotationAssertion(Annotation( "NeuroNames:539") Annotation( ) "pedunculus cerebri, pars basalis") AnnotationAssertion(Annotation( "NeuroNames:539") Annotation( ) "pes pedunculi") AnnotationAssertion(Annotation( "NeuroNames:539") Annotation( ) "pes pedunculi of midbrain") AnnotationAssertion( "UBERON:0002631") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "cerebral crus") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/d/da/Cn3nucleus.png"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "BTO"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA-abduced-lr"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (medial part of medial mammillary nucleus) AnnotationAssertion(Annotation( "BIRNLEX:1220") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "MML") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:MMM") AnnotationAssertion( "BAMS:MMme") AnnotationAssertion( "BAMS:MMn") AnnotationAssertion( "BAMS:Mmme") AnnotationAssertion( "BIRNLEX:1220") AnnotationAssertion( "DHBA:10501") AnnotationAssertion( "DMBA:15730") AnnotationAssertion( "FMA:62345") AnnotationAssertion( "MBA:732") AnnotationAssertion(Annotation( "BIRNLEX:1220") "UMLS:C0694605") AnnotationAssertion(Annotation( "BIRNLEX:1220") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=415") AnnotationAssertion( "medial mammillary nucleus (carpenter)") AnnotationAssertion(Annotation( "FMA:62345") "medial mammillary nucleus, medial part") AnnotationAssertion(Annotation( "FMA:62345") "medial mammillary nucleus, median part") AnnotationAssertion(Annotation( "FMA:62345") "medial subdivision of medial mammillary nucleus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BAMS:MM") "medial mamillary nucleus") AnnotationAssertion(Annotation( "BAMS:MMme") "medial mammillary nucleus median part") AnnotationAssertion(Annotation( "NeuroNames:415") "medial part of the medial mammillary nucleus") AnnotationAssertion(Annotation( "NeuroNames:415") Annotation( ) "nucleus corporis mamillaris medialis, pars medialis") AnnotationAssertion(Annotation( "NeuroNames:415") Annotation( ) "nucleus medialis corpus mamillaris (Shantha)") AnnotationAssertion( "UBERON:0002632") AnnotationAssertion(rdfs:label "medial part of medial mammillary nucleus") SubClassOf( ) SubClassOf(Annotation( "NIFSTD"^^xsd:string) ObjectSomeValuesFrom( )) DisjointClasses(Annotation( "lexical"^^xsd:string) ) # Class: (motor nucleus of trigeminal nerve) AnnotationAssertion(Annotation( "BIRNLEX:1222") "Nucleus located in the pontine tegmentum containing cells that give rise to motor innervation of the jaw through the trigeminal nerve. It receives both crossed and uncrossed fibers from the cerebral cortex (Heimer, L. The Human Brain and Spinal Cord, 2nd ed., 1996, pg 248).") AnnotationAssertion(Annotation( "ZFA"^^xsd:string) "this in ZFA this is part of the medulla; pons is a dubious structure for zebrafish") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:Mo5") AnnotationAssertion( "BAMS:V") AnnotationAssertion( "BIRNLEX:1222") AnnotationAssertion( "BM:Vm") AnnotationAssertion( "BTO:0001075") AnnotationAssertion( "DHBA:12429") AnnotationAssertion( "EMAPA:35882") AnnotationAssertion( "EV:0100273") AnnotationAssertion( "FMA:54562") AnnotationAssertion( "HBA:9206") AnnotationAssertion( "MA:0001029") AnnotationAssertion( "MBA:621") AnnotationAssertion( "NCIT:C33140") AnnotationAssertion( "TAO:0001365") AnnotationAssertion(Annotation( "BIRNLEX:1222") "UMLS:C0228700") AnnotationAssertion(Annotation( "ncithesaurus:Motor_Nucleus_of_the_Trigeminal_Nerve") "UMLS:C0228700") AnnotationAssertion( "VHOG:0001355") AnnotationAssertion( "ZFA:0001365") AnnotationAssertion(Annotation( "BIRNLEX:1222") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=559") AnnotationAssertion(Annotation( "ZFA:0001365") "motor nucleus V") AnnotationAssertion( "motor nucleus of cranial nerve v") AnnotationAssertion(Annotation( "FMA:54562") "motor nucleus of trigeminal nerve") AnnotationAssertion(Annotation( "BTO:0001075") "motor trigeminal nucleus") AnnotationAssertion(Annotation( "ZFA:0001365") "nV") AnnotationAssertion(Annotation( "FMA:54562") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "nucleus motorius nervi trigemini") AnnotationAssertion(Annotation( "MA:0001029") "trigeminal V motor nucleus") AnnotationAssertion(Annotation( "TAO:0001365") Annotation( ) "trigeminal motor nuclei") AnnotationAssertion(Annotation( "ZFA:0001365") "trigeminal motor nucleus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:559") "motor nucleus") AnnotationAssertion(Annotation( "NeuroNames:559") "motor nucleus of the trigeminal") AnnotationAssertion(Annotation( "NeuroNames:559") "motor nucleus of the trigeminal nerve") AnnotationAssertion(Annotation( "BAMS:V") "motor nucleus of trigeminal") AnnotationAssertion(Annotation( "NeuroNames:559") Annotation( ) "nucleus motorius nervi trigeminalis") AnnotationAssertion(Annotation( ) Annotation( ) "nucleus motorius nervi trigemini") AnnotationAssertion(Annotation( "NeuroNames:559") Annotation( ) "nucleus motorius trigeminalis") AnnotationAssertion( "UBERON:0002633") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "motor nucleus of trigeminal nerve") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/3/30/Gray696.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "MA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "NIF"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (anterior nucleus of hypothalamus) AnnotationAssertion(Annotation( "MESH:A08.186.211.730.317.357.342.063") Annotation( "MP:0008848") "A loose heterogeneous collection of cells in the anterior hypothalamus, continuous rostrally with the medial and lateral preoptic areas and caudally with the tuber cinereum.") AnnotationAssertion(Annotation( "BIRNLEX:1226") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "AH") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:AHN") AnnotationAssertion( "BIRNLEX:1226") AnnotationAssertion( "BM:Die-Hy-HAA") AnnotationAssertion( "BTO:0002450") AnnotationAssertion( "DHBA:10475") AnnotationAssertion( "DMBA:15662") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37409") AnnotationAssertion( "EV:0100231") AnnotationAssertion( "FMA:62319") AnnotationAssertion( "GAID:642") AnnotationAssertion( "HBA:12903") AnnotationAssertion( "MBA:88") AnnotationAssertion( "MESH:A08.186.211.730.385.357.342.063") AnnotationAssertion(Annotation( "BIRNLEX:1226") "UMLS:C0020653") AnnotationAssertion(Annotation( "BIRNLEX:1226") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=386") AnnotationAssertion(Annotation( "FMA:62319") "anterior hypothalamic nucleus") AnnotationAssertion(Annotation( "FMA:62319") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "area hypothalamica rostralis") AnnotationAssertion(Annotation( "FMA:62319") "fundamental gray substance") AnnotationAssertion(Annotation( "FMA:62319") "parvocellular nucleus of hypothalamus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:62319") "anterior hypothalamic area") AnnotationAssertion(Annotation( "BAMS:AHA") "anterior hypothalamic area anterior part") AnnotationAssertion(Annotation( "BAMS:AHA") "anterior hypothalamic area, anterior part") AnnotationAssertion(Annotation( "NeuroNames:386") "anterior nucleus of the hypothalamus") AnnotationAssertion(Annotation( ) Annotation( ) "nucleus anterior hypothalami") AnnotationAssertion(Annotation( "BTO:0002450") "nucleus anterior hypothalami") AnnotationAssertion(Annotation( "NeuroNames:386") Annotation( ) "nucleus hypothalamicus anterior") AnnotationAssertion( "UBERON:0002634") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "anterior nucleus of hypothalamus") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/8/8c/HypothalamicNuclei.PNG"^^xsd:anyURI) SubClassOf( ) DisjointClasses(Annotation( "lexical"^^xsd:string) ) # Class: (obsolete regional part of midbrain tegmentum) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A multi-tissue structure that is part of a midbrain tegmentum.") AnnotationAssertion( "BIRNLEX:1227") AnnotationAssertion( "FMA:62399") AnnotationAssertion(Annotation( "FMA:62399") "midbrain tegmentum segment") AnnotationAssertion(Annotation( "BIRNLEX:1227") "segment of midbrain tegmentum") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002635") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "obsolete regional part of midbrain tegmentum") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (lateral pulvinar nucleus) AnnotationAssertion(Annotation( "BIRNLEX:1228") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "LPul") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:LPul") AnnotationAssertion( "BIRNLEX:1228") AnnotationAssertion( "BM:Die-Th-Pl-Pll") AnnotationAssertion( "DHBA:10412") AnnotationAssertion( "FMA:62181") AnnotationAssertion(Annotation( "BIRNLEX:1228") "UMLS:C0228345") AnnotationAssertion(Annotation( "BIRNLEX:1228") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=330") AnnotationAssertion(Annotation( "FMA:62181") "lateral pulvinar nucleus of thalamus") AnnotationAssertion(Annotation( "BIRNLEX:1228") "nucleus pulvinaris lateralis") AnnotationAssertion(Annotation( "BIRNLEX:1228") "nucleus pulvinaris lateralis (Hassler)") AnnotationAssertion(Annotation( "BIRNLEX:1228") "nucleus pulvinaris lateralis thalami") AnnotationAssertion(Annotation( "BIRNLEX:1228") "nucleus pulvinaris thalami, pars lateralis") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002636") AnnotationAssertion(rdfs:label "lateral pulvinar nucleus") SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) DisjointClasses(Annotation( "lexical"^^xsd:string) ) # Class: (ventral anterior nucleus of thalamus) AnnotationAssertion(Annotation( ) "The ventral anterior nucleus is a nucleus of the thalamus.") AnnotationAssertion(Annotation( "BIRNLEX:1232") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "VA") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:VA") AnnotationAssertion( "BIRNLEX:1232") AnnotationAssertion( "BM:Die-Th-VA") AnnotationAssertion( "BTO:0002468") AnnotationAssertion( "DHBA:10417") AnnotationAssertion( "DMBA:16427") AnnotationAssertion( "EMAPA:35133") AnnotationAssertion( "EV:0100199") AnnotationAssertion( "FMA:62184") AnnotationAssertion( "HBA:4418") AnnotationAssertion( "NCIT:C33861") AnnotationAssertion(Annotation( "BIRNLEX:1232") "UMLS:C0175276") AnnotationAssertion(Annotation( "ncithesaurus:Ventroanterior_Nucleus_of_the_Thalamus") "UMLS:C0175276") AnnotationAssertion(Annotation( "BIRNLEX:1232") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=334") AnnotationAssertion(Annotation( "BIRNLEX:1232") "nucleus lateropolaris") AnnotationAssertion(Annotation( "BIRNLEX:1232") "nucleus ventralis anterior") AnnotationAssertion(Annotation( "BIRNLEX:1232") "nucleus ventralis anterior thalami") AnnotationAssertion(Annotation( "BIRNLEX:1232") "nucleus ventralis thalami anterior") AnnotationAssertion(Annotation( "FMA:62184") "ventral anterior nucleus") AnnotationAssertion(Annotation( "FMA:62184") "ventral anterior nucleus of thalamus") AnnotationAssertion(Annotation( "FMA:62184") "ventral anterior thalamic nucleus") AnnotationAssertion( "ventroanterior nucleus of the thalamus") AnnotationAssertion(Annotation( "BIRNLEX:1232") "ventroanterior thalamic nucleus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "nucleus ventralis anterior thalami") AnnotationAssertion(Annotation( "BAMS:VA") "ventral anterior nucleus of the thalamus") AnnotationAssertion( "UBERON:0002637") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "ventral anterior nucleus of thalamus") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/1/1b/ThalamicNuclei.png"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "BTO"^^xsd:string) Annotation( "FMA"^^xsd:string) Annotation( "NIF"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (medial pulvinar nucleus) AnnotationAssertion(Annotation( "BIRNLEX:1233") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "MPul") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:MPul") AnnotationAssertion( "BIRNLEX:1233") AnnotationAssertion( "BM:Die-Th-Pl-Plm") AnnotationAssertion( "DHBA:10411") AnnotationAssertion( "FMA:62182") AnnotationAssertion( "HBA:4412") AnnotationAssertion(Annotation( "BIRNLEX:1233") "UMLS:C0228344") AnnotationAssertion(Annotation( "BIRNLEX:1233") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=331") AnnotationAssertion(Annotation( "BIRNLEX:1233") "nucleus pulvinaris medialis") AnnotationAssertion(Annotation( "BIRNLEX:1233") "nucleus pulvinaris medialis thalami") AnnotationAssertion(Annotation( "BIRNLEX:1233") "nucleus pulvinaris thalami, pars medialis") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002638") AnnotationAssertion(rdfs:label "medial pulvinar nucleus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (midbrain reticular formation) AnnotationAssertion(Annotation( "BIRNLEX:1235") "Part of the reticular formation located in the midbrain tegmentum.") AnnotationAssertion(Annotation( "BIRNLEX:1235") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "MBRF") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:MBRF") AnnotationAssertion( "BIRNLEX:1235") AnnotationAssertion( "BM:MB-MBRF") AnnotationAssertion( "DHBA:12239") AnnotationAssertion( "EMAPA:35570") AnnotationAssertion( "FMA:62406") AnnotationAssertion( "HBA:9018") AnnotationAssertion(Annotation( "BIRNLEX:1235") "UMLS:C0228394") AnnotationAssertion(Annotation( "BIRNLEX:1235") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=501") AnnotationAssertion(Annotation( "FMA:62406") "reticular formation of midbrain") AnnotationAssertion(Annotation( "FMA:62406") "tegmental reticular formation") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:501") Annotation( ) "formatio reticularis mesencephali") AnnotationAssertion(Annotation( "NeuroNames:501") Annotation( ) "formatio reticularis tegmentalis") AnnotationAssertion(Annotation( "NeuroNames:501") Annotation( ) "formatio reticularis tegmenti mesencephali") AnnotationAssertion(Annotation( "NeuroNames:501") Annotation( ) "substantia reticularis mesencephali") AnnotationAssertion( "UBERON:0002639") AnnotationAssertion(rdfs:label "midbrain reticular formation") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (cuneocerebellar tract) AnnotationAssertion(Annotation( "BIRNLEX:1238") "White matter tract that originates from the cuneate and external cuneate nuclei. It relays ascending spinal fibers in the dorsal funiculus and conveys information from forelimbs to the cerebellum.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:ccb") AnnotationAssertion( "BAMS:cct") AnnotationAssertion( "BIRNLEX:1238") AnnotationAssertion( "DHBA:12745") AnnotationAssertion( "FMA:72637") AnnotationAssertion( "MBA:499") AnnotationAssertion(Annotation( "BIRNLEX:1238") "UMLS:C0175556") AnnotationAssertion(Annotation( "BIRNLEX:1238") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=803") AnnotationAssertion(Annotation( "BIRNLEX:1238") "cuneocerebellar fibers") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:803") Annotation( ) "tractus cuneocerebelli") AnnotationAssertion( "UBERON:0002640") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "cuneocerebellar tract") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/9/98/Gray699.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (oral pulvinar nucleus) AnnotationAssertion(Annotation( "BIRNLEX:1239") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "OPul") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:APul") AnnotationAssertion( "BAMS:OPul") AnnotationAssertion( "BIRNLEX:1239") AnnotationAssertion( "BM:Die-Th-Pl-Pla") AnnotationAssertion( "DHBA:10410") AnnotationAssertion( "FMA:62180") AnnotationAssertion( "HBA:4411") AnnotationAssertion(Annotation( "BIRNLEX:1239") "UMLS:C0262299") AnnotationAssertion(Annotation( "BIRNLEX:1239") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=329") AnnotationAssertion(Annotation( "FMA:62180") "anterior pulvinar nucleus") AnnotationAssertion(Annotation( "FMA:62180") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "nucleus pulvinaris anterior") AnnotationAssertion(Annotation( "BIRNLEX:1239") "nucleus pulvinaris oralis") AnnotationAssertion(Annotation( "BIRNLEX:1239") "nucleus pulvinaris oralis thalami") AnnotationAssertion(Annotation( "FMA:62180") "oral nuclear group of pulvinar") AnnotationAssertion(Annotation( "FMA:62180") "oral part of pulvinar") AnnotationAssertion(Annotation( "FMA:62180") "oral portion of pulvinar") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002641") AnnotationAssertion(rdfs:label "oral pulvinar nucleus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (cuneate fasciculus of medulla) AnnotationAssertion(Annotation( "BIRNLEX:1242") "Part of cuneate fasciculus found in the medulla.") AnnotationAssertion( "TODO - change definition to be the *whole* of the CF in the MO. isa parentage to fasciculus of brain should be inferred") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:cu") AnnotationAssertion( "BIRNLEX:1242") AnnotationAssertion( "FMA:72623") AnnotationAssertion(Annotation( "BIRNLEX:1242") "UMLS:C0228521") AnnotationAssertion(Annotation( "BIRNLEX:1242") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=2190") AnnotationAssertion(Annotation( "FMA:72623") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "fasciculus cuneatus (myelencephali)") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:2190") Annotation( ) "nucleus pulvinaris oromedialis (Hassler)") AnnotationAssertion( "UBERON:0002642") AnnotationAssertion(rdfs:label "cuneate fasciculus of medulla") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (decussation of medial lemniscus) AnnotationAssertion(Annotation( ) "The sensory decussation or decussation of the lemniscus is a decussation or cross over of axons from the gracile nucleus and cuneate nucleus. The fibres of this decussation are called the internal arcuate fibres and are found at the superior aspect of the closed medulla superior to the motor decussation. It is part of the second neuron in the Posterior column-medial lemniscus pathway. [WP,unvetted].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:mlx") AnnotationAssertion( "BIRNLEX:1245") AnnotationAssertion( "BM:Me-LMX") AnnotationAssertion( "DHBA:12732") AnnotationAssertion( "DMBA:17777") AnnotationAssertion( "FMA:72622") AnnotationAssertion( "HBA:265505622") AnnotationAssertion(Annotation( "BIRNLEX:1245") "UMLS:C0175544") AnnotationAssertion(Annotation( "BIRNLEX:1245") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=788") AnnotationAssertion(Annotation( "FMA:72622") "decussation of lemnisci") AnnotationAssertion(Annotation( "FMA:72622") "decussation of lemniscus") AnnotationAssertion(Annotation( "FMA:72622") "decussation of medial lemnisci") AnnotationAssertion(Annotation( "FMA:72622") "medial lemniscus decussation") AnnotationAssertion(Annotation( "FMA:72622") "medullary sensory decussation") AnnotationAssertion(Annotation( "FMA:72622") "sensory decussation") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "decussatio lemnisci medialis") AnnotationAssertion(Annotation( "NeuroNames:788") Annotation( ) "decussatio lemniscorum") AnnotationAssertion(Annotation( "NeuroNames:788") Annotation( ) "decussatio lemniscorum medialium") AnnotationAssertion(Annotation( "NeuroNames:788") Annotation( ) "decussatio sensoria") AnnotationAssertion(Annotation( "NeuroNames:788") "decussation of the medial lemniscus") AnnotationAssertion( "UBERON:0002643") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "decussation of medial lemniscus") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/6/66/Gray759.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (intermediate orbital gyrus) AnnotationAssertion( "BAMS:IOrG") AnnotationAssertion( "BIRNLEX:1247") AnnotationAssertion( "FMA:80183") AnnotationAssertion(Annotation( "BIRNLEX:1247") "OldNeuroNames:-1278177547") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002644") AnnotationAssertion(rdfs:label "intermediate orbital gyrus") SubClassOf( ) # Class: (densocellular part of medial dorsal nucleus) AnnotationAssertion(Annotation( "BIRNLEX:1255") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "MDD") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:1255") AnnotationAssertion( "DHBA:10399") AnnotationAssertion( "FMA:62163") AnnotationAssertion( "HBA:4404") AnnotationAssertion(Annotation( "BIRNLEX:1255") "UMLS:C0262218") AnnotationAssertion(Annotation( "BIRNLEX:1255") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=316") AnnotationAssertion(Annotation( "BIRNLEX:1255") "nucleus medialis dorsalis paralamellaris (Hassler)") AnnotationAssertion(Annotation( "BIRNLEX:1255") "nucleus medialis dorsalis, pars densocellularis") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:316") "densocellular part of the medial dorsal nucleus") AnnotationAssertion( "UBERON:0002645") AnnotationAssertion(rdfs:label "densocellular part of medial dorsal nucleus") SubClassOf( ) SubClassOf(Annotation( "NIFSTD"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (dorsal longitudinal fasciculus of medulla) AnnotationAssertion(Annotation( "BIRNLEX:1257") "Part of dorsal longitudinal fasciculus located in the medulla.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:dlfm") AnnotationAssertion( "BIRNLEX:1257") AnnotationAssertion( "FMA:72617") AnnotationAssertion(Annotation( "BIRNLEX:1257") "UMLS:C0228537") AnnotationAssertion(Annotation( "BIRNLEX:1257") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=783") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bundle of Schutz of medulla") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "fasciculus of Schutz of medulla") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "medulla bundle of Schutz") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "medulla dorsal longitudinal fasciculus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "medulla fasciculus of Schutz") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "medulla posterior longitudinal fasciculus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "posterior longitudinal fasciculus of medulla") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:783") "dorsal longitudinal fasciculus of the medulla") AnnotationAssertion(Annotation( "NeuroNames:783") Annotation( ) "fasciculus longitudinalis dorsalis (myelencephali)") AnnotationAssertion( "UBERON:0002646") AnnotationAssertion(rdfs:label "dorsal longitudinal fasciculus of medulla") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (magnocellular part of medial dorsal nucleus) AnnotationAssertion(Annotation( "BIRNLEX:1262") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "MDM") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:1262") AnnotationAssertion( "DHBA:10400") AnnotationAssertion( "EMAPA:35544") AnnotationAssertion( "FMA:62161") AnnotationAssertion( "HBA:4403") AnnotationAssertion( "MBA:636") AnnotationAssertion(Annotation( "BIRNLEX:1262") "UMLS:C0228331") AnnotationAssertion(Annotation( "BIRNLEX:1262") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=314") AnnotationAssertion(Annotation( "FMA:62161") "dorsomedial thalamic nucleus, magnocellular part") AnnotationAssertion(Annotation( "FMA:62161") "magnocellular mediodorsal nucleus") AnnotationAssertion(Annotation( "FMA:62161") "magnocellular nucleus of medial dorsal nucleus of thalamus") AnnotationAssertion(Annotation( "FMA:62161") "magnocellular part of dorsomedial nucleus") AnnotationAssertion(Annotation( "BIRNLEX:1262") "magnocellular part of mediodorsal nucleus") AnnotationAssertion(Annotation( "BIRNLEX:1262") "nucleus medialis dorsalis, pars magnocellularis") AnnotationAssertion(Annotation( "BIRNLEX:1262") "nucleus medialis fibrosus") AnnotationAssertion(Annotation( "BIRNLEX:1262") "nucleus medialis fibrosus (hassler)") AnnotationAssertion(Annotation( "FMA:62161") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "pars magnocellularis nuclei mediodorsalis thalami") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:314") "magnocellular part of the medial dorsal nucleus") AnnotationAssertion( "UBERON:0002647") AnnotationAssertion(rdfs:label "magnocellular part of medial dorsal nucleus") SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (anterior median eminence) AnnotationAssertion(Annotation( "BIRNLEX:1264") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "AME") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:AME") AnnotationAssertion( "BIRNLEX:1264") AnnotationAssertion( "FMA:74870") AnnotationAssertion(Annotation( "BIRNLEX:1264") "UMLS:C0175323") AnnotationAssertion(Annotation( "BIRNLEX:1264") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=403") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:403") Annotation( ) "eminentia mediana anterior") AnnotationAssertion( "UBERON:0002648") AnnotationAssertion(rdfs:label "anterior median eminence") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses(Annotation( "lexical"^^xsd:string) ) # Class: (dorsolateral fasciculus of medulla) AnnotationAssertion(Annotation( "BIRNLEX:1267") "Part of Lissauer's tract located in the medulla.") AnnotationAssertion( "resolve distinction between Lissauer's tract and the medullary component") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:d1") AnnotationAssertion( "BAMS:dfm") AnnotationAssertion( "BIRNLEX:1267") AnnotationAssertion( "FMA:72616") AnnotationAssertion( "NCIT:C33800") AnnotationAssertion(Annotation( "BIRNLEX:1267") "UMLS:C0228587") AnnotationAssertion(Annotation( "ncithesaurus:Tract_of_Lissauer") "UMLS:C0228587") AnnotationAssertion(Annotation( "BIRNLEX:1267") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=782") AnnotationAssertion(Annotation( "BIRNLEX:1267") "dorsolateral fasciculus") AnnotationAssertion(Annotation( "FMA:72616") "dorsolateral tract") AnnotationAssertion(Annotation( "FMA:72616") "lissauer's tract") AnnotationAssertion(Annotation( "FMA:72616") "posterolateral fasciculus") AnnotationAssertion(Annotation( "FMA:72616") "posterolateral tract") AnnotationAssertion( "tract of Lissauer") AnnotationAssertion(Annotation( "FMA:72616") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "tractus posterolateralis") AnnotationAssertion( "zone of Lissauer") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:782") "dorsolateral fasciculus of the medulla") AnnotationAssertion(Annotation( "NeuroNames:782") Annotation( ) "fasciculus dorsolateralis") AnnotationAssertion(Annotation( "NeuroNames:782") Annotation( ) "zona Lissauer") AnnotationAssertion( "UBERON:0002649") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "dorsolateral fasciculus of medulla") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (paralaminar part of medial dorsal nucleus) AnnotationAssertion(Annotation( "BIRNLEX:1276") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "MDPL") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:MDPL") AnnotationAssertion( "BIRNLEX:1276") AnnotationAssertion( "FMA:62160") AnnotationAssertion(Annotation( "BIRNLEX:1276") "UMLS:C0228332") AnnotationAssertion(Annotation( "BIRNLEX:1276") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=313") AnnotationAssertion(Annotation( "FMA:62160") "dorsomedial thalamic nucleus, paralaminar part") AnnotationAssertion(Annotation( "BIRNLEX:1276") "mediodorsal thalamic nucleus, paralaminar part") AnnotationAssertion(Annotation( "BIRNLEX:1276") "nucleus medialis dorsalis caudalis (hassler)") AnnotationAssertion(Annotation( "BIRNLEX:1276") "nucleus medialis dorsalis thalami, pars multiformis") AnnotationAssertion(Annotation( "BIRNLEX:1276") "nucleus medialis dorsalis, pars multiformis") AnnotationAssertion(Annotation( "BIRNLEX:1276") "nucleus medialis dorsalis, pars paralaminaris") AnnotationAssertion(Annotation( "FMA:62160") "paralaminar part of dorsomedial nucleus") AnnotationAssertion(Annotation( "FMA:62160") "paralaminar part of medial dorsal nucleus of thalamus") AnnotationAssertion(Annotation( "FMA:62160") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "pars paralaminaris nuclei mediodorsalis thalami") AnnotationAssertion(Annotation( "FMA:62160") "pars paralaminaris of medial dorsal nucleus of thalamus") AnnotationAssertion(Annotation( "FMA:62160") "ventral mediodorsal nucleus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BAMS:MDPL") "mediodorsal thalamic nucleus paralaminar part") AnnotationAssertion(Annotation( "NeuroNames:313") "paralaminar part") AnnotationAssertion(Annotation( "NeuroNames:313") "paralaminar part of the medial dorsal nucleus") AnnotationAssertion( "UBERON:0002650") AnnotationAssertion(rdfs:label "paralaminar part of medial dorsal nucleus") SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (anterior horn of lateral ventricle) AnnotationAssertion(Annotation( "BIRNLEX:1279") "Part of the lateral ventricle that extends anteriorly into the frontal lobes, bordered by the head of the caudate nucleus on the lateral side (Adapted from Heimer, 1996).") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:FLV") AnnotationAssertion( "BIRNLEX:1279") AnnotationAssertion( "DHBA:10597") AnnotationAssertion( "EMAPA:17770") AnnotationAssertion( "FMA:74520") AnnotationAssertion( "NCIT:C32637") AnnotationAssertion(Annotation( "ncithesaurus:Frontal_Horn_of_the_Lateral_Ventricle") "UMLS:C0152281") AnnotationAssertion(Annotation( "BIRNLEX:1279") "UMLS:C1281033") AnnotationAssertion(Annotation( "FMA:74520") "anterior horn of lateral ventricle") AnnotationAssertion(Annotation( "FMA:74520") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "cornu anterius (ventriculi lateralis)") AnnotationAssertion(Annotation( "FMA:74520") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "cornu anterius ventriculi lateralis") AnnotationAssertion(Annotation( "FMA:74520") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "cornu frontale (ventriculi lateralis)") AnnotationAssertion(Annotation( "FMA:74520") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "cornu frontale ventriculi lateralis") AnnotationAssertion(Annotation( "FMA:74520") "frontal horn of lateral ventricle") AnnotationAssertion(Annotation( "FMA:74520") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "ventriculus lateralis, cornu anterius") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "cornu anterius") AnnotationAssertion( "UBERON:0002651") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "anterior horn of lateral ventricle") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/b/b7/Gray735.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses(Annotation( "lexical"^^xsd:string) ) # Class: (posterior median eminence) AnnotationAssertion(Annotation( "BIRNLEX:1280") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "PME") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:PME") AnnotationAssertion( "BIRNLEX:1280") AnnotationAssertion( "DHBA:12860") AnnotationAssertion( "FMA:74875") AnnotationAssertion(Annotation( "BIRNLEX:1280") "UMLS:C0175323") AnnotationAssertion(Annotation( "BIRNLEX:1280") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=404") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:404") Annotation( ) "eminentia mediana posterior") AnnotationAssertion( "UBERON:0002652") AnnotationAssertion(rdfs:label "posterior median eminence") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (gracile fasciculus of medulla) AnnotationAssertion(Annotation( "BIRNLEX:1282") "Part of gracile fasiculus located in the medulla.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:1282") AnnotationAssertion( "FMA:72624") AnnotationAssertion(Annotation( "BIRNLEX:1282") "UMLS:C0228522") AnnotationAssertion(Annotation( "BIRNLEX:1282") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=790") AnnotationAssertion(Annotation( "FMA:72624") "Goll's tract") AnnotationAssertion( "column of Goll") AnnotationAssertion( "fasciculus of goll") AnnotationAssertion(Annotation( "FMA:72624") "gracile fascicle of medulla") AnnotationAssertion(Annotation( "FMA:72624") "medulla segment of fasciculus gracilis") AnnotationAssertion(Annotation( "FMA:72624") "medulla segment of gracile fasciculus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:790") Annotation( ) "fasciculus dorsolateralis gracilis (Golli)") AnnotationAssertion(Annotation( "NeuroNames:790") Annotation( ) "fasciculus gracilis (myelencephali)") AnnotationAssertion(Annotation( "BIRNLEX:1282") "gracile fascicle (Gall)") AnnotationAssertion(Annotation( "NeuroNames:790") "gracile fascicle (Goll)") AnnotationAssertion(Annotation( "NeuroNames:790") "gracile fasciculus of the medulla") AnnotationAssertion( "tract of Gall") AnnotationAssertion( "UBERON:0002653") AnnotationAssertion(rdfs:label "gracile fasciculus of medulla") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (parvicellular part of medial dorsal nucleus) AnnotationAssertion(Annotation( "BIRNLEX:1283") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "MDPC") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:MDPC") AnnotationAssertion( "BIRNLEX:1283") AnnotationAssertion( "FMA:62162") AnnotationAssertion( "HBA:4419") AnnotationAssertion(Annotation( "BIRNLEX:1283") "UMLS:C0228330") AnnotationAssertion(Annotation( "BIRNLEX:1283") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=315") AnnotationAssertion(Annotation( "FMA:62162") "dorsomedial thalamic nucleus, parvicellular part") AnnotationAssertion(Annotation( "FMA:62162") "lateral mediodorsal nucleus") AnnotationAssertion(Annotation( "FMA:62162") "lateral nucleus of medial dorsal nucleus of thalamus") AnnotationAssertion(Annotation( "BIRNLEX:1283") "mediodorsal thalamic nucleus, pars fasciculosa") AnnotationAssertion(Annotation( "BIRNLEX:1283") "nucleus medialis dorsalis fasciculosis (hassler)") AnnotationAssertion(Annotation( "BIRNLEX:1283") "nucleus medialis dorsalis nucleus fasciculosis (hassler)") AnnotationAssertion(Annotation( "BIRNLEX:1283") "nucleus medialis dorsalis, pars parvicellularis") AnnotationAssertion(Annotation( "FMA:62162") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "pars parvocellularis lateralis nuclei mediodorsalis thalami") AnnotationAssertion(Annotation( "FMA:62162") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "pars principalis nuclei ventralis anterior thalami") AnnotationAssertion(Annotation( "FMA:62162") "parvicellular part of dorsomedial nucleus") AnnotationAssertion(Annotation( "FMA:62162") "parvocellular nucleus of medial dorsal nucleus of thalamus") AnnotationAssertion(Annotation( "FMA:62162") "principal division of ventral anterior nucleus of thalamus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:315") Annotation( ) "nucleus medialis dorsalis nucleus fasciculosus (Hassler)") AnnotationAssertion(Annotation( "NeuroNames:315") Annotation( ) "nucleus medialis dorsalis, pars parvocellularis") AnnotationAssertion(Annotation( "NeuroNames:315") "parvicellular part of the medial dorsal nucleus") AnnotationAssertion( "UBERON:0002654") AnnotationAssertion(rdfs:label "parvicellular part of medial dorsal nucleus") SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "NIFSTD"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (body of lateral ventricle) AnnotationAssertion(Annotation( "BIRNLEX:1287") "Part of lateral ventricle consisting of the central portion that lies dorsally, bounded by the thalamus on the ventral side (Adapted from Heimer, 1996).") AnnotationAssertion(Annotation( ) "The body of lateral ventricle (cella) extends from the interventricular foramen to the splenium of the corpus callosum. It is an irregularly curved cavity, triangular on transverse section, with a roof, a floor, and a medial wall. The roof is formed by the under surface of the corpus callosum; the floor by the following parts, enumerated in their order of position, from before backward: the caudate nucleus of the corpus striatum, the stria terminalis and the terminal vein, the lateral portion of the upper surface of the thalamus, the choroid plexus, and the lateral part of the fornix; the medial wall is the posterior part of the septum pellucidum, which separates it from the opposite ventricle. [WP,unvetted][Wikipedia:Body_of_lateral_ventricle].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:1287") AnnotationAssertion( "DHBA:10598") AnnotationAssertion( "FMA:83703") AnnotationAssertion( "NCIT:C32218") AnnotationAssertion(Annotation( "BIRNLEX:1287") "UMLS:C0152280") AnnotationAssertion(Annotation( "ncithesaurus:Body_of_the_Lateral_Ventricle") "UMLS:C0152280") AnnotationAssertion(Annotation( "FMA:83703") "central part of lateral ventricle") AnnotationAssertion(Annotation( "FMA:83703") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "corpus ventriculi lateralis") AnnotationAssertion(Annotation( "FMA:83703") "lateral ventricular body") AnnotationAssertion(Annotation( "FMA:83703") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "pars centralis (ventriculi lateralis)") AnnotationAssertion(Annotation( "FMA:83703") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "pars centralis ventriculi lateralis") AnnotationAssertion(Annotation( "FMA:83703") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "ventriculus lateralis, corpus") AnnotationAssertion(Annotation( "FMA:83703") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "ventriculus lateralis, pars centralis") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "pars centralis ventriculi lateralis") AnnotationAssertion( "UBERON:0002655") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "body of lateral ventricle") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/b/b7/Gray735.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (periamygdaloid area) AnnotationAssertion( "consider splitting") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:PA") AnnotationAssertion( "BAMS:PAM") AnnotationAssertion( "BAMS:SLG") AnnotationAssertion( "BIRNLEX:1291") AnnotationAssertion( "BM:Tel-Cx-PAM") AnnotationAssertion( "DHBA:10373") AnnotationAssertion( "DHBA:12169") AnnotationAssertion( "FMA:62485") AnnotationAssertion(Annotation( "BIRNLEX:1291") "UMLS:C0458328") AnnotationAssertion(Annotation( "BIRNLEX:1291") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=166") AnnotationAssertion(Annotation( "BIRNLEX:1291") Annotation( ) "periamygdaloid area") AnnotationAssertion(Annotation( "FMA:62485") "periamygdaloid region") AnnotationAssertion(Annotation( "FMA:62485") "semilunar gyrus") AnnotationAssertion(Annotation( "FMA:62485") "ventral cortical nucleus of amygdala") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BIRNLEX:1291") "cortical amygdaloid nucleus") AnnotationAssertion(Annotation( "NeuroNames:166") Annotation( ) "gyrus semilunaris") AnnotationAssertion(Annotation( "FMA:62485") "para-amygdaloid cortex") AnnotationAssertion(Annotation( "NeuroNames:166") "periamygdalar area") AnnotationAssertion(Annotation( "BIRNLEX:1291") "periamygdaloid cortex") AnnotationAssertion(Annotation( "FMA:62485") "periamygdaloid cortex") AnnotationAssertion(Annotation( "BIRNLEX:1291") "periamygdaloid region") AnnotationAssertion(Annotation( "BAMS:PA") "posterior amygdalar nucleus") AnnotationAssertion(Annotation( "BAMS:PA") "posterior nucleus of the amygdala") AnnotationAssertion(Annotation( "NeuroNames:166") Annotation( ) "regio periamygdalaris") AnnotationAssertion(Annotation( "BIRNLEX:1291") "semilunar gyrus") AnnotationAssertion(Annotation( "BIRNLEX:1291") "ventral cortical nucleus of amygdala") AnnotationAssertion( "UBERON:0002656") AnnotationAssertion(rdfs:label "periamygdaloid area") SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (posterior parahippocampal gyrus) AnnotationAssertion(Annotation( ) "The posterior parahippocampal gyrus is a portion of the parahippocampal gyrus. It can show deterioration in Alzheimer's disease.") AnnotationAssertion(Annotation( "FMA:67966") Annotation( "FMA:CMA") Annotation( ) "pHp") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:PPHG") AnnotationAssertion( "BIRNLEX:1295") AnnotationAssertion( "DHBA:12164") AnnotationAssertion( "FMA:67966") AnnotationAssertion(Annotation( "BIRNLEX:1295") "UMLS:C0694597") AnnotationAssertion(Annotation( "BIRNLEX:1295") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=169") AnnotationAssertion( "parahippocampal gyrus (amaral)") AnnotationAssertion(Annotation( "BIRNLEX:1295") "parahippocampal gyrus (insausti)") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:169") Annotation( ) "gyrus parahippocampalis, pars posterior") AnnotationAssertion(Annotation( ) "parahippocampal gyrus, posterior division") AnnotationAssertion( "UBERON:0002657") AnnotationAssertion(rdfs:label "posterior parahippocampal gyrus") SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) DisjointClasses(Annotation( "lexical"^^xsd:string) ) # Class: (medial lemniscus of midbrain) AnnotationAssertion(Annotation( "BIRNLEX:1296") "Part of medial lemniscus located within the midbrain.") AnnotationAssertion(Annotation( "BIRNLEX:1296") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "MLMB") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:mlmb") AnnotationAssertion( "BIRNLEX:1296") AnnotationAssertion( "FMA:72461") AnnotationAssertion(Annotation( "BIRNLEX:1296") "UMLS:C0175406") AnnotationAssertion(Annotation( "BIRNLEX:1296") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=533") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "midbrain medial lemniscus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:533") Annotation( ) "lemniscus medialis (mesencephali)") AnnotationAssertion(Annotation( "NeuroNames:533") "medial lemniscus of the midbrain") AnnotationAssertion( "UBERON:0002658") AnnotationAssertion(rdfs:label "medial lemniscus of midbrain") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "NIFSTD"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "NIFSTD"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (superior medullary velum) AnnotationAssertion(Annotation( ) "The superior medullary velum (anterior medullary velum, valve of Vieussens) is a thin, transparent of white substance, which stretches between the superior cerebellar peduncles; on the dorsal surface of its lower half the folia and lingula are prolonged. It forms, together with the superior cerebellar peduncle, the roof of the upper part of the fourth ventricle; it is narrow above, where it passes beneath the inferior colliculi, and broader below, where it is continuous with the white substance of the superior vermis. A slightly elevated ridge, the fraenulum veli, descends upon its upper part from between the inferior colliculi, and on either side of this the trochlear nerve emerges. Blood is supplied by branches from the superior cerebellar artery. [WP,unvetted].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:RMVE") AnnotationAssertion( "BAMS:SMV") AnnotationAssertion( "BAMS:smv") AnnotationAssertion( "BIRNLEX:1300") AnnotationAssertion( "FMA:74508") AnnotationAssertion(Annotation( "BIRNLEX:1300") "UMLS:C0152284") AnnotationAssertion(Annotation( "BIRNLEX:1300") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=593") AnnotationAssertion(Annotation( "FMA:74508") "anterior medullary velum") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:593") "rostral medullary velum") AnnotationAssertion(Annotation( "NeuroNames:593") Annotation( ) "velum medullare anterius") AnnotationAssertion(Annotation( "NeuroNames:593") Annotation( ) "velum medullare craniale") AnnotationAssertion(Annotation( "NeuroNames:593") Annotation( ) "velum medullare rostralis") AnnotationAssertion(Annotation( "NeuroNames:593") Annotation( ) "velum medullare superior") AnnotationAssertion(Annotation( ) Annotation( ) "velum medullare superius") AnnotationAssertion( "UBERON:0002659") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "superior medullary velum") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/9/9b/Gray701.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (medial longitudinal fasciculus of midbrain) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A medial longitudinal fasciculus that is part of a midbrain [Automatically generated definition].") AnnotationAssertion(Annotation( "BIRNLEX:1302") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "MLFMB") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:mlfmb") AnnotationAssertion( "BIRNLEX:1302") AnnotationAssertion( "FMA:72454") AnnotationAssertion(Annotation( "BIRNLEX:1302") "UMLS:C0262284") AnnotationAssertion(Annotation( "BIRNLEX:1302") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=526") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "midbrain medial longitudinal fasciculus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:526") Annotation( ) "fasciculus longitudinalis medialis (mesencephali)") AnnotationAssertion(Annotation( "NeuroNames:526") "medial longitudinal fasciculus of the midbrain") AnnotationAssertion( "UBERON:0002660") AnnotationAssertion(rdfs:label "medial longitudinal fasciculus of midbrain") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (superior frontal gyrus) AnnotationAssertion(Annotation( "BIRNLEX:1303") "Component of the frontal lobe, lateral aspect. The rostral boundary is the first appearance of the superior frontal sulcus whereas the caudal boundary is the midpoint of the paracentral sulcus on the 'inflated' surface. The medial and lateral boundaries are the medial aspect of the frontal lobe and the superior frontal sulcus respectively (Christine Fennema-Notestine).") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:SFG") AnnotationAssertion( "BIRNLEX:1303") AnnotationAssertion( "BTO:0004836") AnnotationAssertion( "DHBA:12115") AnnotationAssertion( "EFO:0001991") AnnotationAssertion( "FMA:61857") AnnotationAssertion( "HBA:4021") AnnotationAssertion( "NCIT:C33674") AnnotationAssertion(Annotation( "BIRNLEX:1303") "UMLS:C0152296") AnnotationAssertion(Annotation( "ncithesaurus:Superior_Frontal_Convolution") "UMLS:C0152296") AnnotationAssertion(Annotation( "BIRNLEX:1303") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=83") AnnotationAssertion(Annotation( "FMA:61857") "marginal gyrus") AnnotationAssertion(Annotation( "FMA:61857") "superior frontal convolution") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:83") Annotation( ) "gyrus F1") AnnotationAssertion(Annotation( "NeuroNames:83") Annotation( ) "gyrus frontalis primus") AnnotationAssertion(Annotation( ) Annotation( ) "gyrus frontalis superior") AnnotationAssertion( "UBERON:0002661") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "superior frontal gyrus") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/5/50/Superior_frontal_gyrus.png"^^xsd:anyURI) SubClassOf( ) # Class: (medial pes lemniscus) AnnotationAssertion(Annotation( "BIRNLEX:1310") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "MPL") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:mpl") AnnotationAssertion( "BIRNLEX:1310") AnnotationAssertion( "FMA:72460") AnnotationAssertion(Annotation( "BIRNLEX:1310") "UMLS:C0175410") AnnotationAssertion(Annotation( "BIRNLEX:1310") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=532") AnnotationAssertion(Annotation( "FMA:72460") "superficial pes lemniscus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:532") Annotation( ) "pes lemniscus medialis") AnnotationAssertion( "UBERON:0002662") AnnotationAssertion(rdfs:label "medial pes lemniscus") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses(Annotation( "lexical"^^xsd:string) ) # Class: (septal nuclear complex) AnnotationAssertion(Annotation( "BIRNLEX:1313") "Collection of nerve cells in the medial forebrain lying generally in front of the anterior commissure (Maryann Martone).") AnnotationAssertion(Annotation( "MP:0012682") "Any of the groups of neural nuclei situated in the septal region which have afferent and cholinergic efferent connections with a variety of forebrain and brainstem areas including the hippocampus, the lateral hypothalamus, the tegmentum, and the amygdala.") AnnotationAssertion(Annotation( ) "The septal nuclei are structures in the middle anteroventral cerebrum that are composed of medium-size neurons grouped into medial, lateral, and posterior groups. The septal nuclei receive reciprocal connections from the olfactory bulb, hippocampus, amygdala, hypothalamus, midbrain, habenula, cingulate gyrus, and thalamus. The septal nuclei play a role in reward and reinforcement along with the nucleus accumbens. In the 1950s, Olds & Milner showed that rats with electrodes implanted in this area will self-stimulate repeatedly in order to experience a euphoric feeling (i.e. press a bar to receive electrical current that will stimulate the neurons). [WP,unvetted][Wikipedia:Septal_nuclei].") AnnotationAssertion(Annotation( "NIF"^^xsd:string) "in NIFSTD this is the mereological sum of the individual complexes - in MA it is the superclass") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:SptN") AnnotationAssertion( "BIRNLEX:1313") AnnotationAssertion( "DHBA:10350") AnnotationAssertion( "EHDAA2:0004709") AnnotationAssertion( "EMAPA:35763") AnnotationAssertion( "FMA:61845") AnnotationAssertion( "GAID:637") AnnotationAssertion( "HBA:13002") AnnotationAssertion( "MA:0002978") AnnotationAssertion( "MESH:A08.186.211.577.750.800") AnnotationAssertion(Annotation( "BIRNLEX:1313") "UMLS:C0036687") AnnotationAssertion(Annotation( "FMA:61845") "parolfactory nuclei") AnnotationAssertion(Annotation( "FMA:61845") "septal nuclei") AnnotationAssertion(Annotation( "MA:0002978") "septal nucleus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "nuclei septales") AnnotationAssertion( "UBERON:0002663") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "septal nuclear complex") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "NIFSTD"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (lateral part of medial mammillary nucleus) AnnotationAssertion(Annotation( "BIRNLEX:1314") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "MML") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:ML") AnnotationAssertion( "BAMS:MML") AnnotationAssertion( "BIRNLEX:1314") AnnotationAssertion( "DHBA:10500") AnnotationAssertion( "DMBA:15731") AnnotationAssertion( "FMA:62346") AnnotationAssertion( "HBA:4673") AnnotationAssertion(Annotation( "BIRNLEX:1314") "UMLS:C0694606") AnnotationAssertion(Annotation( "BIRNLEX:1314") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=416") AnnotationAssertion(Annotation( "FMA:62346") "intercalated mammillary nucleus") AnnotationAssertion(Annotation( "FMA:62346") "intermediate mammillary nucleus") AnnotationAssertion( "lateral mammillary nucleus (gagel)") AnnotationAssertion(Annotation( "FMA:62346") "lateral subdivision of medial mammillary nucleus") AnnotationAssertion(Annotation( "FMA:62346") "medial mammillary nucleus, lateral part") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:416") "lateral part of the medial mammillary nucleus") AnnotationAssertion(Annotation( "BAMS:ML") "medial mammillary nucleus lateral part") AnnotationAssertion(Annotation( "NeuroNames:416") Annotation( ) "nucleus corporis mamillaris medialis, pars lateralis") AnnotationAssertion(Annotation( "NeuroNames:416") Annotation( ) "nucleus intercalatus corporis mammillaris") AnnotationAssertion(Annotation( "NeuroNames:416") Annotation( ) "nucleus intermedius corpus mamillaris") AnnotationAssertion( "UBERON:0002664") AnnotationAssertion(rdfs:label "lateral part of medial mammillary nucleus") SubClassOf( ) SubClassOf(Annotation( "NIFSTD"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (supracallosal gyrus) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:HiS") AnnotationAssertion( "BAMS:SCG") AnnotationAssertion( "BAMS:Supracallosal_gyrus") AnnotationAssertion( "BIRNLEX:1316") AnnotationAssertion( "FMA:61920") AnnotationAssertion(Annotation( "BIRNLEX:1316") "UMLS:C0152333") AnnotationAssertion(Annotation( "BIRNLEX:1316") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=172") AnnotationAssertion(Annotation( "FMA:61920") "supracommissural hippocampal rudiment") AnnotationAssertion(Annotation( "FMA:61920") "supracommissural hippocampus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:172") Annotation( ) "gyrus supracallosus") AnnotationAssertion(Annotation( "NeuroNames:172") Annotation( ) "hippocampus supracommissuralis") AnnotationAssertion( "UBERON:0002665") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "supracallosal gyrus") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (mesencephalic tract of trigeminal nerve) AnnotationAssertion(Annotation( "BIRNLEX:1318") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "me5") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:me5") AnnotationAssertion( "BAMS:mtV") AnnotationAssertion( "BIRNLEX:1318") AnnotationAssertion( "DHBA:12767") AnnotationAssertion( "FMA:72489") AnnotationAssertion( "HBA:265505458") AnnotationAssertion( "MBA:705") AnnotationAssertion(Annotation( "BIRNLEX:1318") "UMLS:C0228703") AnnotationAssertion(Annotation( "BIRNLEX:1318") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=596") AnnotationAssertion( "mesencephalic root of v") AnnotationAssertion(Annotation( "FMA:72489") "mesencephalic trigeminal tract") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:596") "mesencephalic tract of the trigeminal nerve") AnnotationAssertion(Annotation( "BAMS:mtV") "midbrain tract of the trigeminal nerve") AnnotationAssertion(Annotation( "NeuroNames:596") Annotation( ) "tractus mesencephalicus nervi trigeminalis") AnnotationAssertion(Annotation( "NeuroNames:596") Annotation( ) "tractus mesencephalicus nervi trigemini") AnnotationAssertion(Annotation( "NeuroNames:596") Annotation( ) "tractus mesencephalicus trigeminalis") AnnotationAssertion( "UBERON:0002666") AnnotationAssertion(rdfs:label "mesencephalic tract of trigeminal nerve") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lateral septal nucleus) AnnotationAssertion(Annotation( "BIRNLEX:1321") "Regional part of the septal nuclei, lying dorsal and slightly lateral to the medial septal nucleus. The lateral septum receives the bulk of projections of areas projecting to the septal nuclei (Adapted from Brodal, 1981).") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:LS") AnnotationAssertion( "BAMS:SLN") AnnotationAssertion( "BIRNLEX:1321") AnnotationAssertion( "BM:Tel-Spt-SLN") AnnotationAssertion( "DHBA:10352") AnnotationAssertion( "EMAPA:35486") AnnotationAssertion( "FMA:61878") AnnotationAssertion( "HBA:4303") AnnotationAssertion( "MBA:242") AnnotationAssertion(Annotation( "BIRNLEX:1321") "UMLS:C0175232") AnnotationAssertion(Annotation( "BIRNLEX:1321") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=261") AnnotationAssertion(Annotation( "FMA:61878") "lateral parolfactory nucleus") AnnotationAssertion(Annotation( "BIRNLEX:1321") "lateral septal nucleus (cajal)") AnnotationAssertion(Annotation( "BIRNLEX:1321") "lateral septum") AnnotationAssertion(Annotation( "BIRNLEX:1321") "lateral septum nucleus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:261") Annotation( ) "nucleus lateralis septi") AnnotationAssertion(Annotation( "NeuroNames:261") Annotation( ) "nucleus septalis lateralis") AnnotationAssertion(Annotation( "NeuroNames:261") Annotation( ) "nucleus septi lateralis") AnnotationAssertion( "UBERON:0002667") AnnotationAssertion(rdfs:label "lateral septal nucleus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (oculomotor nerve root) AnnotationAssertion(Annotation( "BIRNLEX:1335") "Initial segment of the occulomotor nerve as it leaves the midbrain.") AnnotationAssertion( "todo - determine pattern for central part of nerve vs fibers vs root") AnnotationAssertion(Annotation( "BIRNLEX:1323") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "3nf") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:3nf") AnnotationAssertion( "BIRNLEX:1323") AnnotationAssertion( "BIRNLEX:1335") AnnotationAssertion( "DHBA:12376") AnnotationAssertion( "DMBA:17736") AnnotationAssertion( "FMA:72457") AnnotationAssertion(Annotation( "BIRNLEX:1323") "UMLS:C0175408") AnnotationAssertion(Annotation( "BIRNLEX:1323") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=529") AnnotationAssertion(Annotation( "FMA:72457") "central part of oculomotor nerve") AnnotationAssertion(Annotation( "FMA:72457") "oculomotor nerve fibers") AnnotationAssertion(Annotation( "FMA:72457") "root of oculomotor nerve") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:529") Annotation( ) "fibrae nervi oculomotorii") AnnotationAssertion( "oculomotor nerve tract") AnnotationAssertion( "UBERON:0002668") AnnotationAssertion(rdfs:label "oculomotor nerve root") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (anterior horizontal limb of lateral sulcus) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:ahls") AnnotationAssertion( "BIRNLEX:1327") AnnotationAssertion( "FMA:83760") AnnotationAssertion(Annotation( "BIRNLEX:1327") "UMLS:C0262190") AnnotationAssertion(Annotation( "BIRNLEX:1327") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=69") AnnotationAssertion(Annotation( "FMA:83760") "anterior branch of lateral sulcus") AnnotationAssertion(Annotation( "FMA:83760") "anterior horizontal limb of lateral fissure") AnnotationAssertion(Annotation( "FMA:83760") "anterior horizontal ramus of lateral fissure") AnnotationAssertion(Annotation( "FMA:83760") "anterior ramus of lateral cerebral sulcus") AnnotationAssertion(Annotation( "FMA:83760") "horizontal limb of lateral fissure") AnnotationAssertion( "horizontal ramus of sylvian fissure") AnnotationAssertion(Annotation( "FMA:83760") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "ramus anterior sulci lateralis cerebri") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:83760") "anterior ramus of lateral sulcus") AnnotationAssertion(Annotation( "NeuroNames:69") Annotation( ) "ramus anterior horizontalis sulcus lateralis") AnnotationAssertion(Annotation( "NeuroNames:69") Annotation( ) "ramus anterior sulcus lateralis") AnnotationAssertion(Annotation( "NeuroNames:69") Annotation( ) "ramus horizontalis fissurae sylvii") AnnotationAssertion(Annotation( "NeuroNames:69") Annotation( ) "sulcus lateralis, ramus anterior") AnnotationAssertion( "UBERON:0002669") AnnotationAssertion(rdfs:label "anterior horizontal limb of lateral sulcus") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ) SubClassOf(Annotation( "NIFSTD"^^xsd:string) ObjectSomeValuesFrom( )) DisjointClasses(Annotation( "lexical"^^xsd:string) ) # Class: (anterior ascending limb of lateral sulcus) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:aals") AnnotationAssertion( "BIRNLEX:1330") AnnotationAssertion( "FMA:83759") AnnotationAssertion(Annotation( "BIRNLEX:1330") "UMLS:C0262186") AnnotationAssertion(Annotation( "BIRNLEX:1330") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=68") AnnotationAssertion(Annotation( "FMA:83759") "anterior ascending limb of lateral fissure") AnnotationAssertion(Annotation( "FMA:83759") "anterior ascending ramus of lateral sulcus") AnnotationAssertion(Annotation( "FMA:83759") "ascending branch of lateral sulcus") AnnotationAssertion(Annotation( "FMA:83759") "ascending ramus of lateral cerebral sulcus") AnnotationAssertion( "ascending ramus of sylvian fissure") AnnotationAssertion(Annotation( "FMA:83759") "middle ramus of lateral fissure") AnnotationAssertion(Annotation( "FMA:83759") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "ramus ascendens sulci lateralis cerebri") AnnotationAssertion(Annotation( "FMA:83759") "superior branch of lateral fissure") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:68") "anterior ascending limb of the lateral fissure") AnnotationAssertion(Annotation( "NeuroNames:68") Annotation( ) "ramus anterior ascendens fissurae lateralis") AnnotationAssertion(Annotation( "NeuroNames:68") Annotation( ) "ramus ascendens sulci cerebri lateralis (Sylvii)") AnnotationAssertion(Annotation( "NeuroNames:68") Annotation( ) "ramus ascendens sulcus lateralis") AnnotationAssertion(Annotation( "NeuroNames:68") Annotation( ) "ramus verticalis fissurae sylvii") AnnotationAssertion(Annotation( "NeuroNames:68") Annotation( ) "sulcus lateralis, ramus ascendens") AnnotationAssertion( "UBERON:0002670") AnnotationAssertion(rdfs:label "anterior ascending limb of lateral sulcus") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ) SubClassOf(Annotation( "NIFSTD"^^xsd:string) ObjectSomeValuesFrom( )) DisjointClasses(Annotation( "lexical"^^xsd:string) ) # Class: (pallidotegmental fasciculus) AnnotationAssertion(Annotation( "BIRNLEX:1331") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "PTF") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:ptf") AnnotationAssertion( "BIRNLEX:1331") AnnotationAssertion( "DHBA:12078") AnnotationAssertion( "FMA:72458") AnnotationAssertion( "MBA:134") AnnotationAssertion(Annotation( "BIRNLEX:1331") "UMLS:C0175407") AnnotationAssertion(Annotation( "BIRNLEX:1331") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=530") AnnotationAssertion(Annotation( "FMA:72458") "pallidotegmental tract") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:530") Annotation( ) "fasciculus pallido-tegmentalis") AnnotationAssertion(Annotation( "NeuroNames:530") Annotation( ) "fibrae pallidoolivares") AnnotationAssertion(Annotation( "NeuroNames:530") "pallidotegmental fascicle") AnnotationAssertion( "UBERON:0002671") AnnotationAssertion(rdfs:label "pallidotegmental fasciculus") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (anterior subcentral sulcus) AnnotationAssertion( ) AnnotationAssertion( "BAMS:ascs") AnnotationAssertion( "BIRNLEX:1332") AnnotationAssertion( "DHBA:146034788") AnnotationAssertion( "FMA:83765") AnnotationAssertion(Annotation( "BIRNLEX:1332") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=73") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:73") "anterior subcentral sulcus") AnnotationAssertion(Annotation( "NeuroNames:73") Annotation( ) "sulcus subcentralis anterior") AnnotationAssertion( "UBERON:0002672") AnnotationAssertion(rdfs:label "anterior subcentral sulcus") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ) DisjointClasses(Annotation( "lexical"^^xsd:string) ) # Class: (vestibular nuclear complex) AnnotationAssertion(Annotation( "UBERON:cjm"^^xsd:string) "Nuclear complex containing the vestibular nuclei.") AnnotationAssertion( "In TA they are grouped in both the pons and medulla; DHBA has 'vestibular nuclei of pons', with LVN and SVN underneath; WP+MA says the SVN is in the pons, and GO includes VNC development under pons development, but this is not supported by ABA. Todo - check with NIF.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:VNC") AnnotationAssertion( "BAMS:Ve") AnnotationAssertion( "BIRNLEX:1337") AnnotationAssertion( "BM:Me-VS") AnnotationAssertion( "BTO:0004368") AnnotationAssertion( "CALOHA:TS-2078") AnnotationAssertion( "EV:0100254") AnnotationAssertion( "FMA:72239") AnnotationAssertion( "GAID:602") AnnotationAssertion( "HBA:9697") AnnotationAssertion( "MBA:701") AnnotationAssertion( "MESH:D014726") AnnotationAssertion(Annotation( "BIRNLEX:1337") "UMLS:C0042600") AnnotationAssertion(Annotation( "BIRNLEX:1337") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=714") AnnotationAssertion(Annotation( "FMA:72239") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "nuclei vestibulares in medulla oblongata") AnnotationAssertion(Annotation( "FMA:72239") "vestibular nuclei") AnnotationAssertion(Annotation( "FMA:72239") "vestibular nuclei in medulla oblongata") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "nuclei vestibulares") AnnotationAssertion(Annotation( "GO:0021750") "vestibular nucleus") AnnotationAssertion( "UBERON:0002673") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "vestibular nuclear complex") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/5/52/Gray691.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "ABA"^^xsd:string) Annotation( "FMA"^^xsd:string) Annotation( "NIF"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (diagonal sulcus) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:dias") AnnotationAssertion( "BIRNLEX:1344") AnnotationAssertion( "FMA:83758") AnnotationAssertion(Annotation( "BIRNLEX:1344") "UMLS:C0694582") AnnotationAssertion(Annotation( "BIRNLEX:1344") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=67") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:67") Annotation( ) "sulcus diagonalis") AnnotationAssertion( "UBERON:0002675") AnnotationAssertion(rdfs:label "diagonal sulcus") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ) # Class: (ventral supraoptic decussation) AnnotationAssertion(Annotation( ) "The ventral supraoptic decussation is the crossover point for signals from the left and right eye, en route respectively to the right and left sides of the visual cortex. Occupying the posterior part of the commissure of the optic chiasma is a strand of fibers, the Ventral supraoptic decussation (commissure of Gudden, Gudden's inferior commissure), which is not derived from the optic nerves; it forms a connecting link between the medial geniculate bodies. [WP,unvetted].") AnnotationAssertion(Annotation( "BIRNLEX:1347") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "VSOX") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:supv") AnnotationAssertion( "BAMS:vsox") AnnotationAssertion( "BIRNLEX:1347") AnnotationAssertion( "FMA:62052") AnnotationAssertion( "MBA:833") AnnotationAssertion(Annotation( "BIRNLEX:1347") "UMLS:C0175339") AnnotationAssertion(Annotation( "BIRNLEX:1347") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=389") AnnotationAssertion(Annotation( "FMA:62052") "Gudden commissure") AnnotationAssertion(Annotation( "FMA:62052") "Gudden's commissure") AnnotationAssertion(Annotation( "BIRNLEX:1347") "VSOX") AnnotationAssertion(Annotation( "FMA:62052") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "commissura supraoptica ventralis") AnnotationAssertion(Annotation( "BIRNLEX:1347") "commissure of Gudden") AnnotationAssertion(Annotation( "FMA:62052") "supraoptic commissures, ventral") AnnotationAssertion(Annotation( "FMA:62052") "ventral supra-optic commissure") AnnotationAssertion(Annotation( "BIRNLEX:1347") "ventral supraoptic commissure (of Meynert)") AnnotationAssertion(Annotation( "BIRNLEX:1347") "ventral supraoptic decussation") AnnotationAssertion(Annotation( "FMA:62052") "von Gudden's commissure") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "commissura supraoptica ventralis") AnnotationAssertion(Annotation( "NeuroNames:389") "supraoptic commissures, ventral (Gudden)") AnnotationAssertion(Annotation( "FMA:62052") "ventral supraoptic decussation of Gudden") AnnotationAssertion( "UBERON:0002676") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "ventral supraoptic decussation") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/c/c0/Gray722.png"^^xsd:anyURI) SubClassOf(Annotation( "UBERON") ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (obsolete regional part of medullary raphe nuclear complex) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A regional part of brain that is part of a medullary raphe nuclear complex [Automatically generated definition].") AnnotationAssertion( "BIRNLEX:1349") AnnotationAssertion( "FMA:83951") AnnotationAssertion(Annotation( "FMA:83951") "medullary raphe nuclear complex segment") AnnotationAssertion(Annotation( "BIRNLEX:1349") "segment of medullary raphe nuclear complex") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002677") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "obsolete regional part of medullary raphe nuclear complex") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete regional part of medulla oblongata) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A regional part of brain that is part of a medulla oblongata [Automatically generated definition].") AnnotationAssertion( "BIRNLEX:1355") AnnotationAssertion( "FMA:71011") AnnotationAssertion( "SCTID:119241003") AnnotationAssertion(Annotation( "FMA:71011") "medullary oblongata segment") AnnotationAssertion(Annotation( "BIRNLEX:1355") "segment of medulla oblongata") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002678") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "obsolete regional part of medulla oblongata") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (anterodorsal nucleus of thalamus) AnnotationAssertion(Annotation( "BIRNLEX:1358") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "AD") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:AD") AnnotationAssertion( "BIRNLEX:1358") AnnotationAssertion( "BM:Die-Th-AD") AnnotationAssertion( "DHBA:10393") AnnotationAssertion( "DMBA:16420") AnnotationAssertion( "EMAPA:35129") AnnotationAssertion( "FMA:62141") AnnotationAssertion( "HBA:4398") AnnotationAssertion( "MBA:64") AnnotationAssertion(Annotation( "BIRNLEX:1358") "UMLS:C0228318") AnnotationAssertion(Annotation( "BIRNLEX:1358") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=303") AnnotationAssertion(Annotation( "EMAPA:35129") "anterior dorsal thalamic nucleus") AnnotationAssertion(Annotation( "FMA:62141") "anterodorsal nucleus") AnnotationAssertion(Annotation( "BIRNLEX:1358") "anterodorsal nucleus of the thalamus") AnnotationAssertion(Annotation( "FMA:62141") "anterodorsal thalamic nucleus") AnnotationAssertion(Annotation( "BIRNLEX:1358") "nucleus anterior dorsalis") AnnotationAssertion(Annotation( "BIRNLEX:1358") "nucleus anterior dorsalis thalami") AnnotationAssertion(Annotation( "BIRNLEX:1358") "nucleus anterior thalami dorsalis") AnnotationAssertion(Annotation( "BIRNLEX:1358") "nucleus anterodorsalis") AnnotationAssertion(Annotation( "BIRNLEX:1358") "nucleus anterodorsalis (hassler)") AnnotationAssertion(Annotation( "BIRNLEX:1358") "nucleus anterodorsalis thalami") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) Annotation( ) "nucleus anterodorsalis thalami") AnnotationAssertion(Annotation( "BIRNLEX:1358") "nucleus anterosuperior") AnnotationAssertion(Annotation( "BIRNLEX:1358") "nucleus thalamicus anterodorsalis") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:303") Annotation( ) "nucleus anterodorsalis of thalamus") AnnotationAssertion( "UBERON:0002679") AnnotationAssertion(rdfs:label "anterodorsal nucleus of thalamus") SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) Annotation( "NIFSTD"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (obsolete regional part of metencephalon) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A regional part of brain that is part of a metencephalon [Automatically generated definition].") AnnotationAssertion( "BIRNLEX:1361") AnnotationAssertion( "FMA:67942") AnnotationAssertion(Annotation( "FMA:67942") "metencephalon subdivision") AnnotationAssertion(Annotation( "BIRNLEX:1361") "segment of metencephalon") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002680") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "obsolete regional part of metencephalon") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (anteromedial nucleus of thalamus) AnnotationAssertion(Annotation( "BIRNLEX:1365") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "AM") AnnotationAssertion(Annotation( "BIRNLEX:1365") "nucleus anteromedialis") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:AM") AnnotationAssertion( "BIRNLEX:1365") AnnotationAssertion( "BM:Die-AM") AnnotationAssertion( "DHBA:10394") AnnotationAssertion( "DMBA:16422") AnnotationAssertion( "FMA:62142") AnnotationAssertion( "HBA:4396") AnnotationAssertion( "MBA:127") AnnotationAssertion(Annotation( "BIRNLEX:1365") "UMLS:C0228319") AnnotationAssertion(Annotation( "BIRNLEX:1365") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=304") AnnotationAssertion(Annotation( "FMA:62142") "anteromedial nucleus") AnnotationAssertion(Annotation( "BIRNLEX:1365") "anteromedial nucleus of the thalamus") AnnotationAssertion(Annotation( "FMA:62142") "anteromedial thalamic nucleus") AnnotationAssertion(Annotation( "BIRNLEX:1365") "nucleus anterior medialis") AnnotationAssertion(Annotation( "BIRNLEX:1365") "nucleus anterior medialis thalami") AnnotationAssertion(Annotation( "BIRNLEX:1365") "nucleus anterior thalami medialis") AnnotationAssertion(Annotation( "BIRNLEX:1365") "nucleus anteromedialis (hassler)") AnnotationAssertion(Annotation( "BIRNLEX:1365") "nucleus anteromedialis thalami") AnnotationAssertion(Annotation( "BIRNLEX:1365") "nucleus thalamicus anteromedialis") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002681") AnnotationAssertion(rdfs:label "anteromedial nucleus of thalamus") SubClassOf( ) SubClassOf(Annotation( "NIFSTD"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (abducens nucleus) AnnotationAssertion(Annotation( "BIRNLEX:1366") "Nucleus located beneath the floor of the 4th ventricle in the pontine tegmentum, containing motor neurons innervating the lateral rectus muscle of the eye (Brodal, Neurological Anatomy, 3rd ed., 1981, pg 533).") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0000713") Annotation( "TAO"^^xsd:string) Annotation( "ISBN:3764351209") "Hindbrain motor nucleus which is the origin of motor axons of cranial nerve VI. From Neuroanatomy of the Zebrafish Brain.[TAO]") AnnotationAssertion(Annotation( "ABA") "part of medulla oblongata in ABA and ZFA; part of pons in MA and pontine tegmentum in NIF; note that pons/medulla are spatially disjoint in ABA.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:6") AnnotationAssertion( "BAMS:VI") AnnotationAssertion( "BIRNLEX:1366") AnnotationAssertion( "BM:Pons-VI") AnnotationAssertion( "DHBA:12418") AnnotationAssertion( "DMBA:17279") AnnotationAssertion( "EHDAA2:0004310") AnnotationAssertion( "EMAPA:35105") AnnotationAssertion( "EV:0100266") AnnotationAssertion( "FMA:54504") AnnotationAssertion( "HBA:9136") AnnotationAssertion( "MA:0001010") AnnotationAssertion( "MBA:653") AnnotationAssertion( "NCIT:C12836") AnnotationAssertion( "TAO:0000713") AnnotationAssertion(Annotation( "BIRNLEX:1366") "UMLS:C0152407") AnnotationAssertion(Annotation( "ncithesaurus:Abducens_Nucleus") "UMLS:C0152407") AnnotationAssertion( "ZFA:0000713") AnnotationAssertion(Annotation( "BIRNLEX:1366") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=585") AnnotationAssertion(Annotation( "MA:0001010") "abducens VI nucleus") AnnotationAssertion(Annotation( "TAO:0000713") Annotation( ) "abducens motor nuclei") AnnotationAssertion(Annotation( "ZFA:0000713") "abducens motor nucleus") AnnotationAssertion(Annotation( "FMA:54504") "abducens nerve nucleus") AnnotationAssertion(Annotation( "FMA:54504") "abducent nucleus") AnnotationAssertion(Annotation( "ZFA:0000713") "motor nucleus VI") AnnotationAssertion(Annotation( "ZFA:0000713") "nVI") AnnotationAssertion(Annotation( "FMA:54504") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "nucleus nervi abducentis") AnnotationAssertion(Annotation( "FMA:54504") "nucleus of abducens nerve") AnnotationAssertion(Annotation( "FMA:54504") "nucleus of abducens nerve (VI)") AnnotationAssertion(Annotation( "FMA:54504") "sixth cranial nerve nucleus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:585") "abducens nucleus proper") AnnotationAssertion(Annotation( "NeuroNames:585") Annotation( ) "nucleus abducens") AnnotationAssertion(Annotation( ) Annotation( ) "nucleus nervi abducentis") AnnotationAssertion( "UBERON:0002682") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "abducens nucleus") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/3/30/Gray696.png"^^xsd:anyURI) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "ABA") Annotation( "ZFA") Annotation( "GO"^^xsd:string) Annotation( "MA"^^xsd:string) Annotation( "NIF"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (rhinal sulcus) AnnotationAssertion(Annotation( ) "In the human brain, the rhinencephalon appears as a longitudinal elevation, with a corresponding internal furrow, on the under surface of the hemisphere close to the lamina terminalis; it is separated from the lateral surface of the hemisphere by a furrow, the external rhinal fissure (or rhinal sulcus), and is continuous behind with that part of the hemisphere, which will ultimately form the anterior end of the temporal lobe. [WP,unvetted].") AnnotationAssertion(Annotation( "BIRNLEX:1368") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "RHS") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:rf") AnnotationAssertion( "BAMS:rhs") AnnotationAssertion( "BIRNLEX:1368") AnnotationAssertion( "BM:Tel-Cx-RS") AnnotationAssertion( "DHBA:10636") AnnotationAssertion( "FMA:83746") AnnotationAssertion( "HBA:9383") AnnotationAssertion( "MBA:1071") AnnotationAssertion(Annotation( "BIRNLEX:1368") "UMLS:C0228254") AnnotationAssertion(Annotation( "BIRNLEX:1368") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=41") AnnotationAssertion(Annotation( "BIRNLEX:1368") "fissura rhinalis") AnnotationAssertion(Annotation( "BIRNLEX:1368") "rhinal fissuer (Turner, Rezius)") AnnotationAssertion(Annotation( "FMA:83746") "rhinal fissure") AnnotationAssertion(Annotation( "BIRNLEX:1368") "sulcus rhinalis") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "fissura rhinalis") AnnotationAssertion(Annotation( "NeuroNames:41") "rhinal fissure (Turner, Rezius)") AnnotationAssertion(Annotation( ) Annotation( ) "sulcus rhinalis") AnnotationAssertion( "UBERON:0002683") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "rhinal sulcus") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/c/ce/Gehirn,_basal_-_beschriftet_lat.svg"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "NIFSTD"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (nucleus raphe obscurus) AnnotationAssertion(Annotation( ) "The raphe obscurus projects to the cerebellar lobes VI and VII and to crus II along with the nucleus raphe pontis . This so called obscure nucleus has also been implicated in the modulation of the hypoglossal nerve. It has been observed that the ablation of this nucleus causes a change in the firing pattern in the XII nerve . In addition, the raphe obscurus mediates expiration via the inhibitory effect of serotonin and depresses periodic synaptic potentials . It has also been shown that this nucleus stimulates gastrointestinal motor function; microinjections of 5-HT into the n.r. obscurus increase gastric movement . [WP,unvetted].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:RO") AnnotationAssertion( "BAMS:ROb") AnnotationAssertion( "BIRNLEX:1369") AnnotationAssertion( "DHBA:12643") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37730") AnnotationAssertion( "FMA:72585") AnnotationAssertion( "HBA:9646") AnnotationAssertion( "MA:0002981") AnnotationAssertion( "MBA:222") AnnotationAssertion(Annotation( "BIRNLEX:1369") "UMLS:C0175516") AnnotationAssertion(Annotation( "BIRNLEX:1369") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=740") AnnotationAssertion(Annotation( "FMA:72585") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "nucleus raphes obscurus") AnnotationAssertion(Annotation( "FMA:72585") "obscurus raphe nucleus") AnnotationAssertion(Annotation( "FMA:72585") "raphe obscurus nucleus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BAMS:RO") "nucleus raphC) obscurus") AnnotationAssertion(Annotation( ) Annotation( ) "nucleus raphes obscurus") AnnotationAssertion( "UBERON:0002684") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "nucleus raphe obscurus") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/9/94/Gray694.png"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (anteroventral nucleus of thalamus) AnnotationAssertion(Annotation( "BIRNLEX:1372") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "AV") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:APr") AnnotationAssertion( "BAMS:AV") AnnotationAssertion( "BAMS:VA") AnnotationAssertion( "BAMS:ald") AnnotationAssertion( "BIRNLEX:1372") AnnotationAssertion( "BM:Die-AV") AnnotationAssertion( "DHBA:10395") AnnotationAssertion( "DMBA:16421") AnnotationAssertion( "EMAPA:35133") AnnotationAssertion( "EV:0100199") AnnotationAssertion( "FMA:62143") AnnotationAssertion( "HBA:4397") AnnotationAssertion( "MBA:255") AnnotationAssertion(Annotation( "BIRNLEX:1372") "UMLS:C0752050") AnnotationAssertion(Annotation( "BIRNLEX:1372") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=305") AnnotationAssertion(Annotation( "FMA:62143") "anterior ventral nucleus of thalamus") AnnotationAssertion(Annotation( "FMA:62143") "anteroprincipal thalamic nucleus") AnnotationAssertion(Annotation( "FMA:62143") "anteroventral nucleus") AnnotationAssertion(Annotation( "FMA:62143") "anteroventral nucleus of thalamus") AnnotationAssertion(Annotation( "BIRNLEX:1372") "anteroventral nucleus of the thalamus") AnnotationAssertion(Annotation( "FMA:62143") "anteroventral thalamic nucleus") AnnotationAssertion(Annotation( "BIRNLEX:1372") "nucleus anterior thalami ventralis") AnnotationAssertion(Annotation( "BIRNLEX:1372") "nucleus anterior ventralis") AnnotationAssertion(Annotation( "BIRNLEX:1372") "nucleus anteroinferior") AnnotationAssertion(Annotation( "BIRNLEX:1372") "nucleus anteroventralis") AnnotationAssertion(Annotation( "BIRNLEX:1372") "nucleus anteroventralis thalami") AnnotationAssertion(Annotation( "BIRNLEX:1372") "nucleus thalamicus anteroprincipalis") AnnotationAssertion(Annotation( "BIRNLEX:1372") "nucleus thalamicus anteroventralis") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:305") Annotation( ) "nucleus anterior principalis (Hassler)") AnnotationAssertion(Annotation( "BAMS:VA") "ventral anterior nucleus of the thalamus") AnnotationAssertion(Annotation( "BAMS:VA") "ventroanterior nucleus") AnnotationAssertion( "UBERON:0002685") AnnotationAssertion(rdfs:label "anteroventral nucleus of thalamus") SubClassOf( ) SubClassOf(Annotation( "NIFSTD"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (angular gyrus) AnnotationAssertion(Annotation( "BIRNLEX:1376") "Part of inferior parietal lobule formed by the cortex surrounding the upturned end of the superior temporal sulcus (Nolte, The Human Brain, 6th ed, 2009, pg 659).") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:AnG") AnnotationAssertion( "BIRNLEX:1376") AnnotationAssertion( "DHBA:12136") AnnotationAssertion( "FMA:61898") AnnotationAssertion( "HBA:4111") AnnotationAssertion( "NCIT:C32077") AnnotationAssertion(Annotation( "BIRNLEX:1376") "UMLS:C0152305") AnnotationAssertion(Annotation( "ncithesaurus:Angular_Gyrus") "UMLS:C0152305") AnnotationAssertion(Annotation( "BIRNLEX:1376") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=109") AnnotationAssertion(Annotation( "FMA:61898") "middle part of inferior parietal lobule") AnnotationAssertion(Annotation( "FMA:61898") "preoccipital gyrus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "gyrus angularis") AnnotationAssertion(Annotation( "NeuroNames:109") Annotation( ) "gyrus parietalis inferior") AnnotationAssertion(Annotation( "NeuroNames:109") "prelunate gyrus") AnnotationAssertion( "UBERON:0002686") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "angular gyrus") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/8/86/Surfacegyri.JPG"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (area X of ventral lateral nucleus) AnnotationAssertion(Annotation( "BIRNLEX:1379") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "X") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:1379") AnnotationAssertion( "DHBA:12653") AnnotationAssertion( "FMA:62198") AnnotationAssertion(Annotation( "BIRNLEX:1379") "UMLS:C0262201") AnnotationAssertion(Annotation( "BIRNLEX:1379") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=342") AnnotationAssertion( "anteromedial part of ventral lateral posterior nucleus (jones)") AnnotationAssertion(Annotation( "FMA:62198") "area X") AnnotationAssertion(Annotation( "BIRNLEX:1379") "area X of Olszewski") AnnotationAssertion(Annotation( "BIRNLEX:1379") "nucleus lateralis intermedius mediodorsalis situs ventralis medialis") AnnotationAssertion(Annotation( "BIRNLEX:1379") "nucleus ventralis oralis, pars posterior (dewulf)") AnnotationAssertion(Annotation( "BIRNLEX:1379") "nucleus ventrooralis internus (hassler)") AnnotationAssertion(Annotation( "BIRNLEX:1379") "nucleus ventrooralis internus, superior part") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:342") Annotation( ) "nucleus ventro-oralis internus (Hassler)") AnnotationAssertion( "UBERON:0002687") AnnotationAssertion(rdfs:label "area X of ventral lateral nucleus") SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (supramarginal gyrus) AnnotationAssertion(Annotation( "BIRNLEX:1381") "Component of the parietal lobe. The first coronal slice between the superior temporal gyrus and the postcentral gyrus where the supramarginal gyrus appears was the rostral boundary whereas the slice where the supramarginal gyrus becomes continuous with the superior parietal gyrus was the caudal boundary. The medial and lateral boundaries were the lateral banks of the intraparietal sulcus and the medial banks of the lateral fissure and/or the superior temporal gyrus respectively (Christine Fennema-Notestine).") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:SMG") AnnotationAssertion( "BIRNLEX:1381") AnnotationAssertion( "DHBA:12135") AnnotationAssertion( "FMA:61897") AnnotationAssertion( "HBA:4104") AnnotationAssertion( "NCIT:C33706") AnnotationAssertion(Annotation( "BIRNLEX:1381") "UMLS:C0228214") AnnotationAssertion(Annotation( "ncithesaurus:Supramarginal_Gyrus") "UMLS:C0228214") AnnotationAssertion(Annotation( "BIRNLEX:1381") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=108") AnnotationAssertion(Annotation( "FMA:61897") "anterior part of inferior parietal lobule") AnnotationAssertion( "inferior parietal lobule (krieg)") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "BA40") AnnotationAssertion(Annotation( ) "Brodmann area 40") AnnotationAssertion(Annotation( "NeuroNames:108") Annotation( ) "gyrus supramarginalis") AnnotationAssertion( "UBERON:0002688") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "supramarginal gyrus") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/e/e2/Gehirn%2C_lateral_-_Hauptgyri_beschriftet.svg"^^xsd:anyURI) AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/e/ec/Gehirn,_lateral_-_Hauptgyri_beschriftet.svg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (supraoptic crest) AnnotationAssertion(Annotation( ) Annotation( ) "One of the circumventricular organs of the brain. The OVLT is outside the blood brain barrier, and so neurons in this region can respond to factors that are present in the systemic circulation.") AnnotationAssertion(Annotation( "NIF"^^xsd:string) "NIF has two classes here; Editor note: consider relationship to lamina terminalis") AnnotationAssertion(Annotation( "BIRNLEX:1400") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "SoC") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:OV") AnnotationAssertion( "BAMS:SoC") AnnotationAssertion( "BAMS:VOLT") AnnotationAssertion( "BIRNLEX:1400") AnnotationAssertion( "DHBA:12106") AnnotationAssertion( "DMBA:15582") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37742") AnnotationAssertion( "FMA:62315") AnnotationAssertion( "MA:0003018") AnnotationAssertion( "MBA:763") AnnotationAssertion( "NLXANAT:100313") AnnotationAssertion(Annotation( "BIRNLEX:1400") "UMLS:C0175316") AnnotationAssertion(Annotation( "BIRNLEX:1400") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=383") AnnotationAssertion(Annotation( "BIRNLEX:1400") Annotation( ) "OVLT") AnnotationAssertion(Annotation( "NLXANAT:100313") Annotation( ) "organum vasculosum lamina terminalis") AnnotationAssertion(Annotation( "FMA:62315") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "organum vasculosum laminae terminalis") AnnotationAssertion(Annotation( "BIRNLEX:1400") "prechiasmatic gland") AnnotationAssertion(Annotation( "FMA:62315") "vascular organ of lamina terminalis") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BAMS:OV") "olfactory ventricle (olfactory part of lateral ventricle)") AnnotationAssertion(Annotation( "NeuroNames:383") "organum vasculosum") AnnotationAssertion(Annotation( "NeuroNames:383") Annotation( ) "organum vasculosum of lamina terminalis") AnnotationAssertion(Annotation( "NeuroNames:383") "vascular organ of the lamina terminalis") AnnotationAssertion( "UBERON:0002689") AnnotationAssertion(rdfs:label "supraoptic crest") SubClassOf(Annotation( "MA"^^xsd:string) ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "Wikipedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (anteroventral periventricular nucleus) AnnotationAssertion(Annotation( "BIRNLEX:1401") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "AVPe") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:AVPV") AnnotationAssertion( "BAMS:AVPe") AnnotationAssertion( "BIRNLEX:1401") AnnotationAssertion( "DHBA:13061") AnnotationAssertion( "FMA:62314") AnnotationAssertion( "HBA:4550") AnnotationAssertion( "MBA:272") AnnotationAssertion(Annotation( "BIRNLEX:1401") "UMLS:C0262200") AnnotationAssertion(Annotation( "BIRNLEX:1401") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=382") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BAMS:AVPe") "anterior ventral periventricular nucleus of hypothalamus") AnnotationAssertion(Annotation( "BAMS:AVPV") "anteroventral periventricular nucleus of the hypothalamus") AnnotationAssertion(Annotation( "NeuroNames:382") Annotation( ) "nucleus periventricularis anteroventralis") AnnotationAssertion(Annotation( "NeuroNames:382") "ventral periventricular hypothalamic nucleus") AnnotationAssertion( "UBERON:0002690") AnnotationAssertion(rdfs:label "anteroventral periventricular nucleus") SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (ventral tegmental area) AnnotationAssertion(Annotation( "BIRNLEX:1415") "Unpaired midbrain region situated in the ventromedial portion of the reticular formation. The VTA is medial to the substantia nigra and ventral to the red nucleus, and extends caudally from the posterior hypothalamus in the diencephalon. The VTA contains dopamine neurons that project to various limbic and cortical areas and is a critical component of the brain's reward circuitry.") AnnotationAssertion(Annotation( "XAO:0004226, PMID:2351962") "Region of the mesencephalon that arises from a small area of the neural plate, spanning the midline immediately adjacent, and being slightly posterior to the dorsal tegmentum area[XAO:0004226, PMID:2351962].") AnnotationAssertion(Annotation( "BIRNLEX:1415") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "VTA") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:VTA") AnnotationAssertion( "BIRNLEX:1415") AnnotationAssertion( "BM:MB-VTA") AnnotationAssertion( "CALOHA:TS-2389") AnnotationAssertion( "DHBA:12261") AnnotationAssertion( "EFO:0001935") AnnotationAssertion( "EMAPA:35913") AnnotationAssertion( "FMA:72438") AnnotationAssertion( "GAID:587") AnnotationAssertion( "HBA:9066") AnnotationAssertion( "MBA:749") AnnotationAssertion( "MESH:A08.186.211.132.659.822.820") AnnotationAssertion(Annotation( "BIRNLEX:1415") "UMLS:C0175405") AnnotationAssertion( "XAO:0004226") AnnotationAssertion(Annotation( "BIRNLEX:1415") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=521") AnnotationAssertion(Annotation( "FMA:72438") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "a10a") AnnotationAssertion(Annotation( "FMA:72438") "ventral tegmental area of tsai") AnnotationAssertion(Annotation( "FMA:72438") "ventral tegmental nucleus (tsai)") AnnotationAssertion(Annotation( "FMA:72438") "ventral tegmental nucleus of tsai") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:521") Annotation( ) "area tegmentalis ventralis") AnnotationAssertion(Annotation( "NeuroNames:521") Annotation( ) "area tegmentalis ventralis (Tsai)") AnnotationAssertion(Annotation( "XAO:0004226") "tegmentum ventrale") AnnotationAssertion(Annotation( "XAO:0004226") "ventral brain stem") AnnotationAssertion(Annotation( "NeuroNames:521") "ventral tegmental area (Tsai)") AnnotationAssertion(Annotation( "NeuroNames:521") "ventral tegmental nucleus (Rioch)") AnnotationAssertion(Annotation( "BIRNLEX:1415") "ventromedial mesencephalic tegmentum") AnnotationAssertion( "UBERON:0002691") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "ventral tegmental area") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/b/b6/Gray712.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (medullary raphe nuclear complex) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:RaM") AnnotationAssertion( "BIRNLEX:1420") AnnotationAssertion( "FMA:68874") AnnotationAssertion( "HBA:9642") AnnotationAssertion(Annotation( "BIRNLEX:1420") "UMLS:C0175514") AnnotationAssertion(Annotation( "BIRNLEX:1420") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=738") AnnotationAssertion(Annotation( "FMA:68874") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "raphe medullae oblongatae") AnnotationAssertion(Annotation( "FMA:68874") "raphe nuclei of medulla") AnnotationAssertion(Annotation( "FMA:68874") "raphe of medulla oblongata") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:738") Annotation( ) "nuclei raphe (myelencephali)") AnnotationAssertion(Annotation( "NeuroNames:738") "raphe nuclei of the medulla") AnnotationAssertion( "UBERON:0002692") AnnotationAssertion(rdfs:label "medullary raphe nuclear complex") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "Wikipedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (occipitotemporal sulcus) AnnotationAssertion(Annotation( "BIRNLEX:1422") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "OTS") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:lots") AnnotationAssertion( "BAMS:ots") AnnotationAssertion( "BIRNLEX:1422") AnnotationAssertion( "BM:Tel-Cx-OTS") AnnotationAssertion( "DHBA:10623") AnnotationAssertion( "FMA:74518") AnnotationAssertion(Annotation( "BIRNLEX:1422") "UMLS:C0228245") AnnotationAssertion(Annotation( "BIRNLEX:1422") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=55") AnnotationAssertion(Annotation( "FMA:74518") "inferior temporal fissure") AnnotationAssertion(Annotation( "BIRNLEX:1422") "inferior temporal fissure (Crosby)") AnnotationAssertion( "inferior temporal sulcus (roberts)") AnnotationAssertion( "inferior temporal sulcus (szikla)") AnnotationAssertion(Annotation( "FMA:74518") "inferior temporal sulcus-2") AnnotationAssertion(Annotation( "BIRNLEX:1422") "lateral occipitotemporal sulcus") AnnotationAssertion(Annotation( "FMA:74518") "occipito-temporal sulcus") AnnotationAssertion(Annotation( "FMA:74518") "third temporal sulcus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BAMS:lots") "lateral occipito -temporal sulcus") AnnotationAssertion(Annotation( "NeuroNames:55") Annotation( ) "sulcus occipitotemporalis") AnnotationAssertion(Annotation( "NeuroNames:55") Annotation( ) "sulcus temporalis inferior (Roberts)") AnnotationAssertion( "UBERON:0002693") AnnotationAssertion(rdfs:label "occipitotemporal sulcus") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (anterior hypothalamic commissure) AnnotationAssertion(Annotation( "BIRNLEX:1424") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "AHC") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:ahc") AnnotationAssertion( "BIRNLEX:1424") AnnotationAssertion( "FMA:62053") AnnotationAssertion( "HBA:4600") AnnotationAssertion(Annotation( "BIRNLEX:1424") "UMLS:C0175337") AnnotationAssertion(Annotation( "BIRNLEX:1424") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=390") AnnotationAssertion(Annotation( "FMA:62053") "anterior hypothalamic commissure (Ganser)") AnnotationAssertion(Annotation( "FMA:62053") "anterior hypothalamic decussation of Ganser") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:390") Annotation( ) "commissura hypothalamica anterior") AnnotationAssertion(Annotation( "NeuroNames:390") Annotation( ) "commissura supraoptica dorsalis pars dorsalis") AnnotationAssertion(Annotation( "NeuroNames:390") Annotation( ) "commissura supraoptica superior pars dorsalis") AnnotationAssertion( "UBERON:0002694") AnnotationAssertion(rdfs:label "anterior hypothalamic commissure") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (parieto-occipital sulcus) AnnotationAssertion(Annotation( ) "Only a small part of the Parietooccipital Fissure (or parieto-occipital sulcus) is seen on the lateral surface of the hemisphere, its chief part being on the medial surface. The lateral part of the parietooccipital fissure (Fig. 726) is situated about 5 cm. in front of the occipital pole of the hemisphere, and measures about 1.25 cm. in length. The medial part of the parietooccipital fissure (Fig. 727) runs downward and forward as a deep cleft on the medial surface of the hemisphere, and joins the calcarine fissure below and behind the posterior end of the corpus callosum. In most cases it contains a submerged gyrus. [WP,unvetted].") AnnotationAssertion(Annotation( "ncit"^^xsd:string) "two classes in ncit (in general ncit distinguishes between fissue and sulcus, whereas FMA treats these as exact synonyms)") AnnotationAssertion(Annotation( "BIRNLEX:1428") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "POS") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:pocs") AnnotationAssertion( "BAMS:pos") AnnotationAssertion( "BIRNLEX:1428") AnnotationAssertion( "BM:Tel-Cx-POS") AnnotationAssertion( "DHBA:10626") AnnotationAssertion( "FMA:83754") AnnotationAssertion( "HBA:9392") AnnotationAssertion( "NCIT:C33275") AnnotationAssertion( "OpenCyc:Mx4rv7l_DJwpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "BIRNLEX:1428") "UMLS:C0228191") AnnotationAssertion(Annotation( "ncithesaurus:Parieto-occipital_Fissure") "UMLS:C1744592") AnnotationAssertion(Annotation( "BIRNLEX:1428") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=52") AnnotationAssertion( "ncithesaurus:Parieto-occipital_Sulcus") AnnotationAssertion(Annotation( "BIRNLEX:1428") "fissura parieto-occipitalis") AnnotationAssertion(Annotation( "FMA:83754") "parieto-occipital fissure") AnnotationAssertion(Annotation( "FMA:83754") "parieto-occipital incisure") AnnotationAssertion(Annotation( "FMA:83754") "parietooccipital sulcus") AnnotationAssertion(Annotation( "BIRNLEX:1428") "sulcus parieto-occipitalis") AnnotationAssertion(Annotation( "BIRNLEX:1428") "sulcus parieto-occipitalis medialis") AnnotationAssertion(Annotation( "BIRNLEX:1428") "sulcus parietoccipitalis") AnnotationAssertion(Annotation( "BIRNLEX:1428") "sulcus parietooccipitalis") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "fissura parietooccipitalis") AnnotationAssertion(Annotation( "BAMS:pos") "posterior orbital sulcus") AnnotationAssertion(Annotation( ) Annotation( ) "sulcus parietooccipitalis") AnnotationAssertion( "UBERON:0002695") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "parieto-occipital sulcus") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/5/5d/Gray726_parieto-occipital_sulcus.png"^^xsd:anyURI) SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (cuneiform nucleus) AnnotationAssertion(Annotation( "BIRNLEX:1430") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "CnF") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:CUN") AnnotationAssertion( "BAMS:CnF") AnnotationAssertion( "BIRNLEX:1430") AnnotationAssertion( "BM:MB-CNF") AnnotationAssertion( "DHBA:12240") AnnotationAssertion( "DMBA:16777") AnnotationAssertion( "FMA:231327") AnnotationAssertion( "FMA:72427") AnnotationAssertion( "HBA:9020") AnnotationAssertion( "MBA:616") AnnotationAssertion(Annotation( "BIRNLEX:1430") "UMLS:C0175396") AnnotationAssertion(Annotation( "BIRNLEX:1430") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=502") AnnotationAssertion(Annotation( "FMA:231327") Annotation( ) "cunieform nucleus") AnnotationAssertion( "parabigeminal area (mai)") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:502") Annotation( ) "area parabigeminalis (Mai)") AnnotationAssertion(Annotation( "NeuroNames:502") "cuneiform nucleus (Castaldi)") AnnotationAssertion(Annotation( "NeuroNames:502") Annotation( ) "nucleus cuneiformis") AnnotationAssertion( "UBERON:0002696") AnnotationAssertion(rdfs:label "cuneiform nucleus") SubClassOf( ) # Class: (dorsal supraoptic decussation) AnnotationAssertion(Annotation( "BIRNLEX:1433") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "DSOX") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:dsox") AnnotationAssertion( "BAMS:supd") AnnotationAssertion( "BIRNLEX:1433") AnnotationAssertion( "FMA:62051") AnnotationAssertion( "MBA:825") AnnotationAssertion(Annotation( "BIRNLEX:1433") "UMLS:C0175338") AnnotationAssertion(Annotation( "BIRNLEX:1433") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=388") AnnotationAssertion(Annotation( "FMA:62051") "Meynert's commissure") AnnotationAssertion(Annotation( "FMA:62051") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "commissura supraoptica dorsalis") AnnotationAssertion( "commissure of Meynert") AnnotationAssertion(Annotation( "FMA:62051") "dorsal supra-optic commissure") AnnotationAssertion(Annotation( "FMA:62051") "dorsal supraoptic commissure") AnnotationAssertion( "dorsal supraoptic commissure (of ganser)") AnnotationAssertion(Annotation( "BIRNLEX:1433") "dorsal supraoptic decussation (of Meynert)") AnnotationAssertion(Annotation( "BIRNLEX:1433") "dorsal supraoptic decussation (of ganser)") AnnotationAssertion( "dorsal supraoptic decussation of Meynert") AnnotationAssertion(Annotation( "FMA:62051") "ganser's commissure") AnnotationAssertion( "supraoptic commissure of Meynert") AnnotationAssertion(Annotation( "FMA:62051") "supraoptic commissures, dorsal") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:388") Annotation( ) "commissura supraoptica dorsalis pars ventralis (Meynert)") AnnotationAssertion(Annotation( "NeuroNames:388") "supraoptic commissures, dorsal (Meynert)") AnnotationAssertion( "UBERON:0002697") AnnotationAssertion(rdfs:label "dorsal supraoptic decussation") SubClassOf( ) SubClassOf(Annotation( "NIFSTD"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (preoccipital notch) AnnotationAssertion(Annotation( "BIRNLEX:1436") "Small indentation on the inferior surface of the cerebral cortex at the border of the occiptal and parietal lobes. It is considered as a landmark because the occipital lobe is located just behind the line that connects that notch with the parietoccipital sulcus (adapted from Wikipedia).") AnnotationAssertion(Annotation( "BIRNLEX:1436") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "PON") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:pon") AnnotationAssertion( "BIRNLEX:1436") AnnotationAssertion( "DHBA:10645") AnnotationAssertion( "FMA:83739") AnnotationAssertion( "HBA:9387") AnnotationAssertion(Annotation( "BIRNLEX:1436") "UMLS:C0228192") AnnotationAssertion(Annotation( "BIRNLEX:1436") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=54") AnnotationAssertion(Annotation( "BIRNLEX:1436") "incisura parieto-occipitalis") AnnotationAssertion(Annotation( "BIRNLEX:1436") "incisura praeoccipitalis") AnnotationAssertion(Annotation( "BIRNLEX:1436") "incisura preoccipitalis") AnnotationAssertion(Annotation( "FMA:83739") "occipital notch") AnnotationAssertion(Annotation( "FMA:83739") "preoccipital incisura") AnnotationAssertion(Annotation( "FMA:83739") "preoccipital incisure") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002698") AnnotationAssertion(rdfs:label "preoccipital notch") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (supraopticohypophysial tract) AnnotationAssertion(Annotation( "BIRNLEX:1440") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "SOH") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:soh") AnnotationAssertion( "BIRNLEX:1440") AnnotationAssertion( "FMA:62054") AnnotationAssertion(Annotation( "BIRNLEX:1440") "UMLS:C0228368") AnnotationAssertion(Annotation( "BIRNLEX:1440") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=391") AnnotationAssertion(Annotation( "FMA:62054") "supra-opticohypophysial tract") AnnotationAssertion(Annotation( "FMA:62054") "supraopticohypophyseal tract") AnnotationAssertion(Annotation( "FMA:62054") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "tractus supraopticohypophysialis") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:391") Annotation( ) "tractus hypothalamico-hypophyseus") AnnotationAssertion(Annotation( "NeuroNames:391") Annotation( ) "tractus hypothalamohypophysialis") AnnotationAssertion(Annotation( "NeuroNames:391") Annotation( ) "tractus supraoptico-hypophyseus") AnnotationAssertion( "UBERON:0002699") AnnotationAssertion(rdfs:label "supraopticohypophysial tract") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf(Annotation( "FMA"^^xsd:string) Annotation( "NIFSTD"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (subcuneiform nucleus) AnnotationAssertion(Annotation( "BIRNLEX:1441") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "SubCn") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:SubCn") AnnotationAssertion( "BIRNLEX:1441") AnnotationAssertion( "DHBA:12246") AnnotationAssertion( "DMBA:16787") AnnotationAssertion( "FMA:72428") AnnotationAssertion( "HBA:9022") AnnotationAssertion(Annotation( "BIRNLEX:1441") "UMLS:C0175397") AnnotationAssertion(Annotation( "BIRNLEX:1441") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=503") AnnotationAssertion(Annotation( "FMA:72428") "subcuneiform area of midbrain") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:503") Annotation( ) "nucleus subcuneiformis") AnnotationAssertion( "UBERON:0002700") AnnotationAssertion(rdfs:label "subcuneiform nucleus") SubClassOf( ) # Class: (anterior median oculomotor nucleus) AnnotationAssertion(Annotation( "BIRNLEX:1445") Annotation( "NIFSTD:Paxinos-Franklin-mouse-2001_abbrevSource") Annotation( ) "AM3") AnnotationAssertion(Annotation( "FMA:54524") "nucleus anteromedialis") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:AM3") AnnotationAssertion( "BIRNLEX:1445") AnnotationAssertion( "DHBA:12199") AnnotationAssertion( "FMA:54524") AnnotationAssertion( "FMA:72423") AnnotationAssertion( "HBA:9032") AnnotationAssertion(Annotation( "BIRNLEX:1445") "UMLS:C0175382") AnnotationAssertion(Annotation( "BIRNLEX:1445") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=497") AnnotationAssertion(Annotation( "FMA:54524") "anterior medial visceral nucleus") AnnotationAssertion(Annotation( "FMA:72423") "anterior median nucleus of oculomotor nerve") AnnotationAssertion(Annotation( ) "anterior median nucleus of oculomotor nuclear complex") AnnotationAssertion(Annotation( "FMA:54524") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "nucleus visceralis anteromedialis") AnnotationAssertion(Annotation( "FMA:54524") "ventral medial nucleus of oculomotor nerve") AnnotationAssertion(Annotation( "FMA:54524") "ventral medial visceral nucleus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:54524") "nucleus anteromedialis") AnnotationAssertion(Annotation( "NeuroNames:497") Annotation( ) "nucleus nervi oculomotorii medianus anterior") AnnotationAssertion( "UBERON:0002701") AnnotationAssertion(rdfs:label "anterior median oculomotor nucleus") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "NIFSTD"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (middle frontal gyrus) AnnotationAssertion(Annotation( "BIRNLEX:1451") "Component of the frontal lobe, lateral aspect (Christine Fennema-Notestine).") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:MFG") AnnotationAssertion( "BIRNLEX:1451") AnnotationAssertion( "BTO:0004834") AnnotationAssertion( "DHBA:12116") AnnotationAssertion( "FMA:61859") AnnotationAssertion( "HBA:4028") AnnotationAssertion( "NCIT:C33118") AnnotationAssertion(Annotation( "BIRNLEX:1451") "UMLS:C0152297") AnnotationAssertion(Annotation( "BIRNLEX:1451") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=84") AnnotationAssertion( "ncithesaurus:Middle_Frontal_Gyrus") AnnotationAssertion(Annotation( "FMA:61859") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "gyrus frontalis medialis") AnnotationAssertion(Annotation( "FMA:61859") "intermediate frontal gyrus") AnnotationAssertion(Annotation( "FMA:61859") "medial frontal gyrus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:84") Annotation( ) "gyrus F2") AnnotationAssertion(Annotation( "NeuroNames:84") Annotation( ) "gyrus frontalis medialis (Winters)") AnnotationAssertion(Annotation( ) Annotation( ) "gyrus frontalis medius") AnnotationAssertion(Annotation( "NeuroNames:84") Annotation( ) "gyrus frontalis secundus") AnnotationAssertion(Annotation( "NeuroNames:84") "medial frontal gyrus (Mai)") AnnotationAssertion(Annotation( "BAMS:MFG") "middle (medial) frontal gyrus") AnnotationAssertion( "UBERON:0002702") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "middle frontal gyrus") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/7/7f/Middle_frontal_gyrus.png"^^xsd:anyURI) SubClassOf( ) # Class: (precentral gyrus) AnnotationAssertion(Annotation( "BIRNLEX:1455") "Component of the frontal lobe. The appearance and disappearance of the central sulcus is the rostral and caudal boundaries of the precentral gyrus respectively. The medial boundary is specific frontal gyri (superior, middle and inferior) whereas the lateral boundary is the medial bank of the central sulcus (Christine Fennema-Notestine).") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:PrG") AnnotationAssertion( "BIRNLEX:1455") AnnotationAssertion( "DHBA:12114") AnnotationAssertion( "EFO:0001373") AnnotationAssertion( "FMA:61894") AnnotationAssertion( "HBA:4010") AnnotationAssertion( "NCIT:C33393") AnnotationAssertion(Annotation( "BIRNLEX:1455") "UMLS:C0152299") AnnotationAssertion(Annotation( "ncithesaurus:Precentral_Gyrus") "UMLS:C0152299") AnnotationAssertion(Annotation( "BIRNLEX:1455") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=89") AnnotationAssertion(Annotation( "FMA:61894") "precentral convolution") AnnotationAssertion(Annotation( "FMA:61894") "prerolandic gyrus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:89") "anterior central gyrus") AnnotationAssertion(Annotation( "NeuroNames:89") Annotation( ) "gyrus centralis anterior") AnnotationAssertion(Annotation( "NeuroNames:89") Annotation( ) "gyrus praecentralis") AnnotationAssertion(Annotation( "NeuroNames:89") "motor cortex (Noback)") AnnotationAssertion( "UBERON:0002703") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "precentral gyrus") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/e/eb/Ba4.png"^^xsd:anyURI) SubClassOf( ) # Class: (metathalamus) AnnotationAssertion(Annotation( ) "The metathalamus is a composite structure of the thalamus, consisting of the medial geniculate nucleus and the lateral geniculate nucleus. [WP,unvetted].") AnnotationAssertion(Annotation( "FMA"^^xsd:string) "we follow FMA in making this a subtype of nucleus, but in fact it is a group containing two nuclei") AnnotationAssertion(Annotation( "BIRNLEX:1461") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "MTh") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:GENd") AnnotationAssertion( "BAMS:MTh") AnnotationAssertion( "BAMS:MetThal") AnnotationAssertion( "BAMS:Metathalamus") AnnotationAssertion( "BIRNLEX:1461") AnnotationAssertion( "EMAPA:35376") AnnotationAssertion( "EV:0100217") AnnotationAssertion( "FMA:62023") AnnotationAssertion( "MA:0000868") AnnotationAssertion( "MBA:1008") AnnotationAssertion(Annotation( "BIRNLEX:1461") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=351") AnnotationAssertion(Annotation( "FMA:62023") "geniculate group of the dorsal thalamus") AnnotationAssertion(Annotation( "MA:0000868") "geniculate thalamic group") AnnotationAssertion(Annotation( "BIRNLEX:1461") "nuclei metathalami") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "corpora geniculata") AnnotationAssertion(Annotation( "BAMS:GENd") "geniculate group of dorsal thalamus") AnnotationAssertion(Annotation( "BAMS:GENd") "geniculate thalamic nuclear group (metathalamus)") AnnotationAssertion( "UBERON:0002704") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "metathalamus") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/1/1b/ThalamicNuclei.png"^^xsd:anyURI) SubClassOf( ) # Class: (midline nuclear group) AnnotationAssertion(Annotation( ) "The midline nuclear group (or midline thalamic nuclei) a region of the thalamus consisting of the following nuclei: paraventricular nucleus of thalamus (nucleus paraventricularis thalami) - not to be confused with paraventricular nucleus of hypothalamus paratenial nucleus (nucleus parataenialis) reuniens nucleus (nucleus reuniens) rhomboidal nucleus (nucleus commissuralis rhomboidalis) subfascicular nucleus (nucleus subfascicularis) [WP,unvetted].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:MNG") AnnotationAssertion( "BAMS:MTN") AnnotationAssertion( "BAMS:MidTh") AnnotationAssertion( "BIRNLEX:1462") AnnotationAssertion( "BTO:0002454") AnnotationAssertion( "EMAPA:35573") AnnotationAssertion( "FMA:62020") AnnotationAssertion( "MA:0000864") AnnotationAssertion( "MBA:571") AnnotationAssertion(Annotation( "BIRNLEX:1462") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=306") AnnotationAssertion(Annotation( "FMA:62020") "median nuclei of thalamus") AnnotationAssertion(Annotation( "FMA:62020") "midline nuclear group") AnnotationAssertion(Annotation( "FMA:62020") "midline nuclear group of thalamus") AnnotationAssertion(Annotation( "FMA:62020") "midline nuclei of thalamus") AnnotationAssertion(Annotation( "MA:0000864") "midline thalamic group") AnnotationAssertion(Annotation( "BIRNLEX:1462") "nuclei mediani (thalami)") AnnotationAssertion(Annotation( "FMA:62020") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "nuclei mediani thalami") AnnotationAssertion(Annotation( "FMA:62020") "periventricular nuclei of thalamus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BAMS:MTN") "midline group of the dorsal thalamus") AnnotationAssertion(Annotation( "BAMS:MNG") "midline thalamic nuclear group") AnnotationAssertion(Annotation( "BAMS:MTN") "midline thalamic nuclear group") AnnotationAssertion(Annotation( "NeuroNames:306") "midline thalamic nuclei") AnnotationAssertion(Annotation( ) Annotation( ) "nuclei mediani thalami") AnnotationAssertion(Annotation( "BTO:0002454") "nucleus mediani thalami") AnnotationAssertion( "UBERON:0002705") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "midline nuclear group") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/1/1b/ThalamicNuclei.png"^^xsd:anyURI) SubClassOf( ) # Class: (posterior nucleus of hypothalamus) AnnotationAssertion(Annotation( ) "The posterior nucleus of the hypothalamus is one of the many nuclei that make up the hypothalamic region of the brain. Its function is thermoregulation (heating) of the body. Damage or destruction of this nucleus causes hypothermia.") AnnotationAssertion(Annotation( "BIRNLEX:1463") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "PH") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:HPA") AnnotationAssertion( "BAMS:PH") AnnotationAssertion( "BIRNLEX:1463") AnnotationAssertion( "BM:Die-Hy-HPA") AnnotationAssertion( "BTO:0002461") AnnotationAssertion( "DHBA:10503") AnnotationAssertion( "EV:0100235") AnnotationAssertion( "FMA:62350") AnnotationAssertion( "HBA:12910") AnnotationAssertion( "MBA:946") AnnotationAssertion(Annotation( "BIRNLEX:1463") "UMLS:C0228385") AnnotationAssertion(Annotation( "BIRNLEX:1463") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=420") AnnotationAssertion(Annotation( "FMA:62350") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "area hypothalamica posterior") AnnotationAssertion(Annotation( "FMA:62350") "posterior hypothalamic area") AnnotationAssertion(Annotation( "FMA:62350") "posterior hypothalamic nucleus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:420") Annotation( ) "area posterior hypothalami") AnnotationAssertion(Annotation( "NeuroNames:420") Annotation( ) "nucleus hypothalamicus posterior") AnnotationAssertion(Annotation( "BTO:0002461") "nucleus posterior hypothalami") AnnotationAssertion(Annotation( "NeuroNames:420") "posterior nucleus") AnnotationAssertion(Annotation( "NeuroNames:420") "posterior nucleus of the hypothalamus") AnnotationAssertion( "UBERON:0002706") AnnotationAssertion(rdfs:label "posterior nucleus of hypothalamus") SubClassOf( ) SubClassOf(Annotation( "NIFSTD"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (corticospinal tract) AnnotationAssertion(Annotation( "ISBN:0-683-40008-8"^^xsd:string) Annotation( "MP:0002878") "The corticospinal fibers that arise from the pyramidal cells within the cerebral cortex layer V of the precentral motor area, the premotor area and the postcentral gyrus, then descend into and through the medulla to form the lateral corticospinal tract and the anterior corticospinal tract.") AnnotationAssertion( "UBERON:0004095") AnnotationAssertion(Annotation( ) Annotation( "BIRNLEX:1464") Annotation( "MP:0002878") Annotation( ) "pyramidal tract") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:P") AnnotationAssertion( "BIRNLEX:1464") AnnotationAssertion( "BM:CST") AnnotationAssertion( "BM:Me-PyT") AnnotationAssertion( "DHBA:12776") AnnotationAssertion( "DMBA:17756") AnnotationAssertion( "EMAPA:36600") AnnotationAssertion( "FMA:72634") AnnotationAssertion( "GAID:702") AnnotationAssertion( "HBA:265505574") AnnotationAssertion( "MBA:190") AnnotationAssertion( "MBA:784") AnnotationAssertion( "MESH:D011712") AnnotationAssertion(Annotation( "BIRNLEX:1464") "UMLS:C0034229") AnnotationAssertion(Annotation( "BIRNLEX:1464") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=800") AnnotationAssertion(Annotation( "NeuroNames:1320") "corticospinal fibers") AnnotationAssertion(Annotation( "NeuroNames:1320") Annotation( ) "fasciculus cerebro-spinalis") AnnotationAssertion(Annotation( "NeuroNames:800") Annotation( ) "fasciculus pyramidalis") AnnotationAssertion(Annotation( "NeuroNames:1320") Annotation( ) "fibrae corticospinales") AnnotationAssertion(Annotation( "NeuroNames:800") "pyramid (Willis)") AnnotationAssertion(Annotation( "NeuroNames:1320") Annotation( ) "tractus cortico-spinalis") AnnotationAssertion(Annotation( ) Annotation( ) "tractus corticospinalis") AnnotationAssertion(Annotation( "NeuroNames:1320") Annotation( ) "tractus corticospinalis") AnnotationAssertion(Annotation( "NeuroNames:800") Annotation( ) "tractus pyramidalis") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002707") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "corticospinal tract") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/a/ac/Gray684.png"^^xsd:anyURI) SubClassOf(Annotation( "In NIFSTD this is a tract of brain but this leads to issues due to its overlap with the spinal cord") ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (posterior periventricular nucleus) AnnotationAssertion(Annotation( "BIRNLEX:1466") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "PPe") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:PPe") AnnotationAssertion( "BAMS:PVp") AnnotationAssertion( "BIRNLEX:1466") AnnotationAssertion( "BTO:0002479") AnnotationAssertion( "DMBA:16441") AnnotationAssertion( "FMA:62349") AnnotationAssertion( "MBA:126") AnnotationAssertion(Annotation( "BIRNLEX:1466") "UMLS:C0262317") AnnotationAssertion(Annotation( "BIRNLEX:1466") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=419") AnnotationAssertion(Annotation( "NeuroNames:419") Annotation( ) "griseum periventriculare hypothalami") AnnotationAssertion(Annotation( "BTO:0002479") "nucleus periventricularis posterior") AnnotationAssertion(Annotation( "NeuroNames:419") "periventricular hypothalamic nucleus, posterior part") AnnotationAssertion(Annotation( "FMA:62349") "periventricular nucleus, posterior subdivision") AnnotationAssertion(Annotation( "BAMS:PVp") "posterior paraventricular nucleus") AnnotationAssertion(Annotation( "BIRNLEX:1466") "posterior periventricular hypothalamic nucleus") AnnotationAssertion(Annotation( "FMA:62349") "posterior periventricular nucleus") AnnotationAssertion(Annotation( "FMA:62349") "posterior periventricular nucleus of hypothalamus") AnnotationAssertion(Annotation( "BAMS:PVp") "posterior periventricular nucleus of the hypothalamus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002708") AnnotationAssertion(rdfs:label "posterior periventricular nucleus") SubClassOf( ) SubClassOf(Annotation( "NIFSTD"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (posterior nuclear complex of thalamus) AnnotationAssertion(Annotation( "BIRNLEX:1467") "Part of thalamus comprising ill defined cellular groups in the caudal thalamus at the meso-diencephalic junction. It is not a homogeneous structure but consists of several distinct cellular groups, including the suprageniculate and limitans nuclei, the magnocellular division of the medial geniculate body, portions of the pulvinar nucleus and an area of mixed cell types intercalated between the ventroposterior nucleus and the nucleus lateral posterior (Brodal, Neurological Anatomy, 3rd ed., 1981, pg 97).") AnnotationAssertion( "ZFA grouping dubious") AnnotationAssertion(Annotation( "BIRNLEX:1467") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "PNC") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:PNC") AnnotationAssertion( "BAMS:PO") AnnotationAssertion( "BAMS:Po") AnnotationAssertion( "BIRNLEX:1467") AnnotationAssertion( "BTO:0002462") AnnotationAssertion( "DHBA:10428") AnnotationAssertion( "EMAPA:35697") AnnotationAssertion( "EMAPA:35698") AnnotationAssertion( "FMA:62024") AnnotationAssertion( "MBA:1020") AnnotationAssertion(Annotation( "BIRNLEX:1467") "UMLS:C0175298") AnnotationAssertion(Annotation( "BIRNLEX:1467") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=360") AnnotationAssertion(Annotation( "TAO:0000325") "caudal thalamic nucleus") AnnotationAssertion(Annotation( "BIRNLEX:1467") "nuclei posteriores thalami") AnnotationAssertion(Annotation( "FMA:62024") "posterior complex of thalamus") AnnotationAssertion(Annotation( "BAMS:PO") "posterior complex of the thalamus") AnnotationAssertion(Annotation( "FMA:62024") "posterior nuclear complex") AnnotationAssertion(Annotation( "FMA:62024") "posterior nuclear complex of thalamus") AnnotationAssertion(Annotation( "FMA:62024") "posterior nuclear group of thalamus") AnnotationAssertion(Annotation( "BAMS:Po") "posterior nucleus of dorsal thalamus") AnnotationAssertion(Annotation( "FMA:62024") "posterior thalamic nuclear group") AnnotationAssertion(Annotation( "BTO:0002462") "posterior thalamic nucleus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BAMS:PO") "parieto-occipital") AnnotationAssertion( "UBERON:0002709") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "posterior nuclear complex of thalamus") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) DisjointClasses(Annotation( "lexical"^^xsd:string) ) # Class: (cingulate sulcus) AnnotationAssertion(Annotation( ) "The cingulate sulcus is a sulcus (brain fold) on the medial wall of the cerebral cortex. The frontal and parietal lobes are separated by the cingulate sulcus from the cingulate gyrus. [WP,unvetted].") AnnotationAssertion(Annotation( "BIRNLEX:1468") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "CGS") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:cgs") AnnotationAssertion( "BAMS:cms") AnnotationAssertion( "BIRNLEX:1468") AnnotationAssertion( "BM:Tel-Cx-CGS") AnnotationAssertion( "DHBA:10615") AnnotationAssertion( "FMA:83748") AnnotationAssertion( "HBA:9364") AnnotationAssertion(Annotation( "BIRNLEX:1468") "UMLS:C0228189") AnnotationAssertion(Annotation( "BIRNLEX:1468") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=43") AnnotationAssertion(Annotation( "FMA:83748") "calloso-marginal sulcus") AnnotationAssertion(Annotation( "FMA:83748") "callosomarginal fissure") AnnotationAssertion(Annotation( "FMA:83748") "callosomarginal sulcus") AnnotationAssertion(Annotation( "FMA:83748") "cingulate fissure") AnnotationAssertion(Annotation( "BIRNLEX:1468") "sulcus callosomarginalis") AnnotationAssertion(Annotation( "BIRNLEX:1468") "sulcus cingulatus") AnnotationAssertion(Annotation( "BIRNLEX:1468") "sulcus cinguli") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "sulcus cinguli") AnnotationAssertion( "UBERON:0002710") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "cingulate sulcus") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/2/2e/Gray727_cingulate_sulcus.svg"^^xsd:anyURI) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (nucleus of posterior commissure) AnnotationAssertion( "in hagfishes, this is the name of one of the two pretectal nuclei[ISBN:0471888893]") AnnotationAssertion( "in lizards, this is the name of one of the two pretectal nuclei[ISBN:0471888893]") AnnotationAssertion(Annotation( "BIRNLEX:1470") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "PCom") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:NPC") AnnotationAssertion( "BAMS:PCN") AnnotationAssertion( "BAMS:PCom") AnnotationAssertion( "BIRNLEX:1470") AnnotationAssertion( "BM:NPC") AnnotationAssertion( "FMA:68463") AnnotationAssertion( "HBA:9027") AnnotationAssertion( "MBA:634") AnnotationAssertion(Annotation( "BIRNLEX:1470") "UMLS:C0175386") AnnotationAssertion(Annotation( "BIRNLEX:1470") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=511") AnnotationAssertion(Annotation( "FMA:68463") "posterior commissure nucleus") AnnotationAssertion( "Darkshevich nucleus") AnnotationAssertion( "Darkshevich's nucleus") AnnotationAssertion( "nucleus of Darkschewitsch") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:511") Annotation( ) "nucleus commissura posterior") AnnotationAssertion(Annotation( "NeuroNames:511") Annotation( ) "nucleus commissuralis posterioris") AnnotationAssertion(Annotation( "NeuroNames:511") Annotation( ) "nucleus interstitialis of posterior commissure") AnnotationAssertion(Annotation( "NeuroNames:511") "nucleus of the posterior commissure") AnnotationAssertion( "UBERON:0002711") AnnotationAssertion(rdfs:label "nucleus of posterior commissure") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses(Annotation( "lexical"^^xsd:string) ) # Class: (premammillary nucleus) AnnotationAssertion(Annotation( "BIRNLEX:1473") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "PMm") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:PM") AnnotationAssertion( "BAMS:PMm") AnnotationAssertion( "BIRNLEX:1473") AnnotationAssertion( "FMA:62348") AnnotationAssertion( "HBA:4676") AnnotationAssertion(Annotation( "BIRNLEX:1473") "UMLS:C0262317") AnnotationAssertion(Annotation( "BIRNLEX:1473") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=418") AnnotationAssertion(Annotation( "FMA:62348") "premammillary nuclei") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:418") Annotation( ) "nuclei premamillaris") AnnotationAssertion(Annotation( "NeuroNames:418") Annotation( ) "nucleus premamillaris hypothalami") AnnotationAssertion(Annotation( "NeuroNames:418") "premamillary nucleus") AnnotationAssertion( "UBERON:0002712") AnnotationAssertion(rdfs:label "premammillary nucleus") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (circular sulcus of insula) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A marginal sulcus that is part of a insula [Automatically generated definition].") AnnotationAssertion(Annotation( "BIRNLEX:1475") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "CRS") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:crs") AnnotationAssertion( "BAMS:mis") AnnotationAssertion( "BIRNLEX:1475") AnnotationAssertion( "FMA:83753") AnnotationAssertion( "HBA:9398") AnnotationAssertion( "NCIT:C32321") AnnotationAssertion(Annotation( "BIRNLEX:1475") "UMLS:C0228258") AnnotationAssertion(Annotation( "BIRNLEX:1475") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=51") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "central lobe marginal branch of cingulate sulcus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "central lobe marginal ramus of cingulate sulcus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "central lobe marginal sulcus") AnnotationAssertion(Annotation( "FMA:83753") "circular fissure") AnnotationAssertion( "circular sulcus (of reil)") AnnotationAssertion(Annotation( "FMA:83753") "circuminsular sulcus") AnnotationAssertion(Annotation( "BIRNLEX:1475") "ciruclar insular sulcus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "cortex of island marginal branch of cingulate sulcus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "cortex of island marginal ramus of cingulate sulcus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "cortex of island marginal sulcus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "insula lobule marginal branch of cingulate sulcus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "insula lobule marginal ramus of cingulate sulcus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "insula lobule marginal sulcus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "insula marginal branch of cingulate sulcus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "insula marginal ramus of cingulate sulcus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "insula marginal sulcus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "insular cortex marginal branch of cingulate sulcus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "insular cortex marginal ramus of cingulate sulcus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "insular cortex marginal sulcus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "insular lobe marginal branch of cingulate sulcus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "insular lobe marginal ramus of cingulate sulcus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "insular lobe marginal sulcus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "insular region marginal branch of cingulate sulcus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "insular region marginal ramus of cingulate sulcus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "insular region marginal sulcus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "island of reil marginal branch of cingulate sulcus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "island of reil marginal ramus of cingulate sulcus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "island of reil marginal sulcus") AnnotationAssertion(Annotation( "FMA:83753") "limiting fissure") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "marginal branch of cingulate sulcus of central lobe") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "marginal branch of cingulate sulcus of cortex of island") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "marginal branch of cingulate sulcus of insula") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "marginal branch of cingulate sulcus of insula lobule") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "marginal branch of cingulate sulcus of insular cortex") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "marginal branch of cingulate sulcus of insular lobe") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "marginal branch of cingulate sulcus of insular region") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "marginal branch of cingulate sulcus of island of reil") AnnotationAssertion(Annotation( "BIRNLEX:1475") "marginal insular sulcus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "marginal ramus of cingulate sulcus of central lobe") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "marginal ramus of cingulate sulcus of cortex of island") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "marginal ramus of cingulate sulcus of insula") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "marginal ramus of cingulate sulcus of insula lobule") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "marginal ramus of cingulate sulcus of insular cortex") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "marginal ramus of cingulate sulcus of insular lobe") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "marginal ramus of cingulate sulcus of insular region") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "marginal ramus of cingulate sulcus of island of reil") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "marginal sulcus of central lobe") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "marginal sulcus of cortex of island") AnnotationAssertion(Annotation( "FMA:83753") "marginal sulcus of insula") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "marginal sulcus of insula lobule") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "marginal sulcus of insular cortex") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "marginal sulcus of insular lobe") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "marginal sulcus of insular region") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "marginal sulcus of island of reil") AnnotationAssertion(Annotation( "BIRNLEX:1475") "sulcus circularis insulae") AnnotationAssertion(Annotation( "BIRNLEX:1475") "sulcus marginalis insulae") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:51") "circular insular sulcus") AnnotationAssertion(Annotation( "NeuroNames:51") "circular sulcus") AnnotationAssertion(Annotation( "NeuroNames:51") "circular sulcus of the insula") AnnotationAssertion(Annotation( "NeuroNames:51") "circuminsular fissure") AnnotationAssertion(Annotation( "BAMS:crs") "cruciform sulcus") AnnotationAssertion(Annotation( "NeuroNames:51") "limiting sulcus") AnnotationAssertion(Annotation( "NeuroNames:51") "peri-insular sulcus") AnnotationAssertion(Annotation( "NeuroNames:51") "periinsular sulci") AnnotationAssertion( "UBERON:0002713") AnnotationAssertion(rdfs:label "circular sulcus of insula") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (rubrospinal tract) AnnotationAssertion(Annotation( "BIRNLEX:1476") "White matter tract arising in red nucleus and projecting to spinal cord ventral horn.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:rs") AnnotationAssertion( "BAMS:rust") AnnotationAssertion( "BIRNLEX:1476") AnnotationAssertion( "DHBA:12782") AnnotationAssertion( "DMBA:17792") AnnotationAssertion( "FMA:72640") AnnotationAssertion( "MBA:863") AnnotationAssertion(Annotation( "BIRNLEX:1476") "UMLS:C0152377") AnnotationAssertion(Annotation( "BIRNLEX:1476") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=806") AnnotationAssertion(Annotation( "FMA:72640") "Monakow's tract") AnnotationAssertion(Annotation( "BIRNLEX:1476") "rubrospinal tract (Monakow)") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "tractus rubrospinalis") AnnotationAssertion( "UBERON:0002714") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "rubrospinal tract") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/b/b2/Spinal_cord_tracts_-_English.svg"^^xsd:anyURI) AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/f/fe/Medulla_spinalis_-_tracts_-_English.svg"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "FMA NIF combined") ObjectSomeValuesFrom( )) # Class: (spinal trigeminal tract of medulla) AnnotationAssertion(Annotation( "BIRNLEX:1477") "Part of spinal trigeminal tract located in the medulla.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:sp5m") AnnotationAssertion( "BIRNLEX:1477") AnnotationAssertion( "FMA:72625") AnnotationAssertion(Annotation( "BIRNLEX:1477") "UMLS:C0262330") AnnotationAssertion(Annotation( "BIRNLEX:1477") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=791") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:791") "spinal trigeminal tract of the medulla") AnnotationAssertion(Annotation( "NeuroNames:791") Annotation( ) "tractus spinalis nervi trigemini (myelencephali)") AnnotationAssertion( "UBERON:0002715") AnnotationAssertion(rdfs:label "spinal trigeminal tract of medulla") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (collateral sulcus) AnnotationAssertion(Annotation( ) "The collateral fissure (or sulcus) is on the tentorial surface of the hemisphere and extends from near the occipital pole to within a short distance of the temporal pole. Behind, it lies below and lateral to the calcarine fissure, from which it is separated by the lingual gyrus; in front, it is situated between the hippocampal gyrus and the anterior part of the fusiform gyrus. [WP,unvetted].") AnnotationAssertion(Annotation( "FMA"^^xsd:string) "cnit has two distinct classes; FMA and NIF treat these as exact synonyms.") AnnotationAssertion(Annotation( "BIRNLEX:1480") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "COS") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:cos") AnnotationAssertion( "BIRNLEX:1480") AnnotationAssertion( "DHBA:10618") AnnotationAssertion( "FMA:83751") AnnotationAssertion( "HBA:9380") AnnotationAssertion( "NCIT:C32340") AnnotationAssertion(Annotation( "BIRNLEX:1480") "UMLS:C0228226") AnnotationAssertion(Annotation( "BIRNLEX:1480") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=47") AnnotationAssertion( "ncithesaurus:Collateral_Sulcus") AnnotationAssertion(Annotation( "FMA:83751") "collateral fissure") AnnotationAssertion(Annotation( "BIRNLEX:1480") "sulcus collateralis") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "fissura collateralis") AnnotationAssertion(Annotation( ) Annotation( ) "sulcus collateralis") AnnotationAssertion( "UBERON:0002716") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "collateral sulcus") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/9/93/Gray738.png"^^xsd:anyURI) SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (rostral interstitial nucleus of medial longitudinal fasciculus) AnnotationAssertion(Annotation( ) "The rostral interstitial nucleus of medial longitudinal fasciculus (riMLF) is a portion of the medial longitudinal fasciculus which controls vertical gaze. They project to the vestibular nuclei. [WP,unvetted].") AnnotationAssertion(Annotation( "BIRNLEX:1481") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "RI") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:RI") AnnotationAssertion( "BIRNLEX:1481") AnnotationAssertion( "FMA:72433") AnnotationAssertion( "HBA:9060") AnnotationAssertion( "MBA:1078") AnnotationAssertion(Annotation( "BIRNLEX:1481") "UMLS:C0175403") AnnotationAssertion(Annotation( "BIRNLEX:1481") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=516") AnnotationAssertion(Annotation( ) "riMLF") AnnotationAssertion(Annotation( "FMA:72433") "rostral interstitial nucleus of MLF") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "nucleus interstitialis") AnnotationAssertion(Annotation( "NeuroNames:516") Annotation( ) "nucleus interstitialis rostralis") AnnotationAssertion(Annotation( "NeuroNames:516") "rostral interstitial nucleus of the medial longitudinal fasciculus") AnnotationAssertion( "UBERON:0002717") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "rostral interstitial nucleus of medial longitudinal fasciculus") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/9/90/Gray710.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) Annotation( "NIF"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) # Class: (solitary tract) AnnotationAssertion(Annotation( ) "The solitary tract is a compact fiber bundle that extends longitudinally through the posterolateral region of the medulla. The solitary tract is surrounded by the nucleus of the solitary tract, and descends to the upper cervical segments of the spinal cord. [WP,unvetted].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:sol") AnnotationAssertion( "BAMS:ts") AnnotationAssertion( "BIRNLEX:1483") AnnotationAssertion( "BM:Me-ST") AnnotationAssertion( "DHBA:12783") AnnotationAssertion( "DMBA:17796") AnnotationAssertion( "FMA:72619") AnnotationAssertion( "HBA:265505626") AnnotationAssertion( "MBA:237") AnnotationAssertion(Annotation( "BIRNLEX:1483") "UMLS:C0175559") AnnotationAssertion(Annotation( "BIRNLEX:1483") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=785") AnnotationAssertion( "respiratory bundle of Gierke") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:785") Annotation( ) "fasciculus solitarius") AnnotationAssertion(Annotation( "NeuroNames:785") "solitary tract (Stilling)") AnnotationAssertion(Annotation( "NeuroNames:785") Annotation( ) "tractus solitarius") AnnotationAssertion(Annotation( ) Annotation( ) "tractus solitarius medullae oblongatae") AnnotationAssertion( "UBERON:0002718") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "solitary tract") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/9/93/Gray695.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (spino-olivary tract) AnnotationAssertion(Annotation( ) "The spino-olivary tract is located in the ventral funiculus of the spinal cord. This tract carries proprioception information from muscles and tendons as well as cutaneous impulses to the olivary nucleus. [WP,unvetted].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:spo") AnnotationAssertion( "BIRNLEX:1484") AnnotationAssertion( "DHBA:12793") AnnotationAssertion( "FMA:72643") AnnotationAssertion( "MBA:261") AnnotationAssertion(Annotation( "BIRNLEX:1484") "UMLS:C0175562") AnnotationAssertion(Annotation( "BIRNLEX:1484") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=809") AnnotationAssertion(Annotation( "FMA:72643") "helweg's tract") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:809") "spino-olivary pathways") AnnotationAssertion(Annotation( "NeuroNames:809") "spino-olivary tracts") AnnotationAssertion(Annotation( "NeuroNames:809") Annotation( ) "tractus spino-olivaris") AnnotationAssertion(Annotation( ) Annotation( ) "tractus spinoolivaris") AnnotationAssertion( "UBERON:0002719") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "spino-olivary tract") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (mammillary peduncle) AnnotationAssertion(Annotation( "BIRNLEX:1486") "White matter bundle in the posterior hypothalamus containing ascending afferent fibers to the mammillary bodies from the ventral and dorsal tegmental nuclei (Brodal, Neurological Anatomy, 3rd ed., 1981, pg 671).") AnnotationAssertion(Annotation( "BIRNLEX:1486") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "MPE") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:mp") AnnotationAssertion( "BAMS:mpe") AnnotationAssertion( "BIRNLEX:1486") AnnotationAssertion( "DHBA:266441609") AnnotationAssertion( "DMBA:17780") AnnotationAssertion( "FMA:62061") AnnotationAssertion( "HBA:265505166") AnnotationAssertion( "MBA:673") AnnotationAssertion(Annotation( "BIRNLEX:1486") "UMLS:C0152358") AnnotationAssertion(Annotation( "BIRNLEX:1486") "UMLS:C1289573") AnnotationAssertion(Annotation( "BIRNLEX:1486") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=425") AnnotationAssertion(Annotation( "FMA:62061") "peduncle of mammillary body") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:425") "mammillary peduncle (Meynert)") AnnotationAssertion(Annotation( "NeuroNames:425") Annotation( ) "pedunculus corporis mamillaris") AnnotationAssertion(Annotation( "NeuroNames:425") Annotation( ) "pedunculus corporis mammillaris") AnnotationAssertion( "UBERON:0002720") AnnotationAssertion(rdfs:label "mammillary peduncle") SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (lateral sulcus) AnnotationAssertion(Annotation( ) "A sulcus that divides the frontal lobe and parietal lobe above from the temporal lobe below. It is in both hemispheres of the brain but is longer in the left hemisphere. The lateral sulcus is one of the earliest-developing sulci of the human brain. It first appears around the fourteenth gestational week[WP,modified].") AnnotationAssertion(Annotation( "BIRNLEX:1487") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "LS") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:lf") AnnotationAssertion( "BAMS:ls") AnnotationAssertion( "BIRNLEX:1487") AnnotationAssertion( "BM:Tel-Cx-LS") AnnotationAssertion( "DHBA:10621") AnnotationAssertion( "DHBA:12110") AnnotationAssertion( "FMA:77801") AnnotationAssertion( "HBA:9402") AnnotationAssertion( "NCIT:C32615") AnnotationAssertion(Annotation( "BIRNLEX:1487") "UMLS:C0228187") AnnotationAssertion(Annotation( "ncithesaurus:Fissure_of_Sylvius") "UMLS:C0228187") AnnotationAssertion(Annotation( "BIRNLEX:1487") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=49") AnnotationAssertion(Annotation( "BIRNLEX:1487") "Sylvian fissure") AnnotationAssertion(Annotation( ) "Sylvian sulcus") AnnotationAssertion(Annotation( "BIRNLEX:1487") "fissura lateralis") AnnotationAssertion(Annotation( "BIRNLEX:1487") "fissura lateralis cerebri") AnnotationAssertion(Annotation( "BIRNLEX:1487") "fissura lateralis cerebri (sylvii)") AnnotationAssertion(Annotation( "FMA:77801") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "fissura transversa cerebri") AnnotationAssertion( "fissure of Sylvius") AnnotationAssertion(Annotation( "FMA:77801") "lateral cerebral fissure") AnnotationAssertion(Annotation( "FMA:77801") "lateral cerebral sulcus") AnnotationAssertion(Annotation( "FMA:77801") "lateral fissure") AnnotationAssertion( "lateral fissure of Sylvius") AnnotationAssertion(Annotation( "BIRNLEX:1487") "sulcus lateralis") AnnotationAssertion(Annotation( ) Annotation( ) "sulcus lateralis cerebri") AnnotationAssertion(Annotation( "FMA:77801") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "sulcus lateralis cerebri") AnnotationAssertion(Annotation( "FMA:77801") "transverse cerebral fissure") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:49") Annotation( ) "sulcus cerebri lateralis (Sylvii)") AnnotationAssertion( "UBERON:0002721") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "lateral sulcus") AnnotationAssertion( "Lateral:sulcus2.png"^^xsd:anyURI) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf(Annotation( "NIFSTD"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (trochlear nucleus) AnnotationAssertion(Annotation( "BIRNLEX:1488") "Nucleus in the midbrain at the level of the inferior colliculus near the midline, containing the motor neurons giving rise to the trochlear nerve, innervating the contralateral superior oblique extraocular muscle of the eye (Brodal, Neurological Anatomy, 3rd ed, 1981, pg. 533).") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:4") AnnotationAssertion( "BAMS:4N") AnnotationAssertion( "BAMS:IV") AnnotationAssertion( "BIRNLEX:1488") AnnotationAssertion( "BM:MB-IV") AnnotationAssertion( "DHBA:12206") AnnotationAssertion( "DMBA:16903") AnnotationAssertion( "EMAPA:35886") AnnotationAssertion( "EV:0100251") AnnotationAssertion( "FMA:54518") AnnotationAssertion( "HBA:9063") AnnotationAssertion( "MA:0001075") AnnotationAssertion( "MBA:115") AnnotationAssertion( "TAO:0000450") AnnotationAssertion(Annotation( "BIRNLEX:1488") "UMLS:C0152406") AnnotationAssertion( "ZFA:0000450") AnnotationAssertion(Annotation( "BIRNLEX:1488") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=513") AnnotationAssertion(Annotation( "FMA:54518") "fourth cranial nerve nucleus") AnnotationAssertion(Annotation( "ZFA:0000450") "motor nucleus IV") AnnotationAssertion(Annotation( "ZFA:0000450") "nIV") AnnotationAssertion(Annotation( "FMA:54518") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "nucleus nervi trochlearis") AnnotationAssertion(Annotation( "FMA:54518") "nucleus of trochlear nerve") AnnotationAssertion(Annotation( "MA:0001075") "trochlear IV nucleus") AnnotationAssertion(Annotation( "ZFA:0000450") "trochlear motor nucleus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "nucleus nervi trochlearis") AnnotationAssertion( "UBERON:0002722") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "trochlear nucleus") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/c/c6/Drn.png"^^xsd:anyURI) AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/en/thumb/c/c6/Drn.png/200px-Drn.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (mammillary princeps fasciculus) AnnotationAssertion(Annotation( "BIRNLEX:1492") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "MPR") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:mpr") AnnotationAssertion( "BAMS:pm") AnnotationAssertion( "BIRNLEX:1492") AnnotationAssertion( "FMA:62057") AnnotationAssertion( "MBA:753") AnnotationAssertion(Annotation( "BIRNLEX:1492") "UMLS:C0175331") AnnotationAssertion(Annotation( "BIRNLEX:1492") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=422") AnnotationAssertion(Annotation( "FMA:62057") "principal mammillary fasciculus") AnnotationAssertion(Annotation( "BIRNLEX:1492") "principal mammillary tract") AnnotationAssertion(Annotation( "FMA:62057") "principle mamillary fasciculus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:422") Annotation( ) "fasciculus mamillaris") AnnotationAssertion(Annotation( "NeuroNames:422") Annotation( ) "fasciculus mamillaris princeps") AnnotationAssertion(Annotation( "NeuroNames:422") Annotation( ) "fasciculus mammillaris princeps") AnnotationAssertion(Annotation( "NeuroNames:422") "principal mammillary tract (Kvlliker)") AnnotationAssertion( "UBERON:0002723") AnnotationAssertion(rdfs:label "mammillary princeps fasciculus") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (limen of insula) AnnotationAssertion(Annotation( ) Annotation( "BIRNLEX:1493") "The anterior basal part of the insular cortex, which separates the lateral surface of the insula from the anterior perforated substance (Heimer, The Human Brain and Spinal Cord, 2nd ed., 1995, pg 80).") AnnotationAssertion(Annotation( "BIRNLEX:1493") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "LMI") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:lmi") AnnotationAssertion( "BIRNLEX:1493") AnnotationAssertion( "DHBA:12179") AnnotationAssertion( "FMA:75266") AnnotationAssertion(Annotation( "BIRNLEX:1493") "UMLS:C0228263") AnnotationAssertion(Annotation( "BIRNLEX:1493") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=50") AnnotationAssertion(Annotation( "FMA:75266") "angulus gyri olfactorii lateralis") AnnotationAssertion(Annotation( "BIRNLEX:1493") "gyrus ambiens (Noback)") AnnotationAssertion(Annotation( "FMA:75266") "insula limen") AnnotationAssertion(Annotation( "BIRNLEX:1493") "limen insulae") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:2072") "ambient gyrus") AnnotationAssertion(Annotation( "NeuroNames:2072") "gyrus ambiens") AnnotationAssertion(Annotation( "NeuroNames:50") "limen insula") AnnotationAssertion(Annotation( "NeuroNames:50") "limen of the insula") AnnotationAssertion( "UBERON:0002724") AnnotationAssertion(rdfs:label "limen of insula") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (cervical spinal cord) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A spinal cord segment that adjacent_to a cervical region.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:1499") AnnotationAssertion( "FMA:71166") AnnotationAssertion( "MA:0003081") AnnotationAssertion( "NCIT:C12892") AnnotationAssertion(Annotation( "BIRNLEX:1499") "UMLS:C0581619") AnnotationAssertion(Annotation( "ncithesaurus:Cervical_Spinal_Cord") "UMLS:C0581619") AnnotationAssertion(Annotation( "BIRNLEX:1499") "UMLS:C1278837") AnnotationAssertion(Annotation( "FMA:71166") "cervical segment of spinal cord") AnnotationAssertion(Annotation( "FMA:71166") "cervical segments of spinal cord [1-8]") AnnotationAssertion(Annotation( "FMA:71166") "cervical spinal cord") AnnotationAssertion(Annotation( "FMA:71166") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "pars cervicalis medullae spinalis") AnnotationAssertion(Annotation( "FMA:71166") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "segmenta cervicalia medullae spinalis [1-8") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002726") AnnotationAssertion(rdfs:label "cervical spinal cord") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (medial medullary lamina of globus pallidus) AnnotationAssertion(Annotation( "BIRNLEX:1501") "Thin sheet of white matter dividing the external and internal segments of the globus pallidus in primates.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:mml") AnnotationAssertion( "BIRNLEX:1501") AnnotationAssertion( "BTO:0002251") AnnotationAssertion( "DHBA:12062") AnnotationAssertion( "FMA:62470") AnnotationAssertion( "HBA:265505122") AnnotationAssertion(Annotation( "BIRNLEX:1501") "UMLS:C0152340") AnnotationAssertion(Annotation( "BIRNLEX:1501") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=235") AnnotationAssertion(Annotation( "FMA:62470") "inner medullary lamina") AnnotationAssertion(Annotation( "FMA:62470") "internal medullary lamina of corpus striatum") AnnotationAssertion(Annotation( "FMA:62470") "internal medullary lamina of globus pallidus") AnnotationAssertion(Annotation( "FMA:62470") "internal medullary lamina of lentiform nucleus") AnnotationAssertion(Annotation( "FMA:62470") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "lamina medullaris interna corporis striati") AnnotationAssertion(Annotation( "FMA:62470") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "lamina medullaris medialis corporis striati") AnnotationAssertion(Annotation( "FMA:62470") "medial medullary lamina") AnnotationAssertion(Annotation( "FMA:62470") "medial medullary lamina of corpus striatum") AnnotationAssertion(Annotation( "FMA:62470") "medial medullary lamina of globus pallidus") AnnotationAssertion(Annotation( "FMA:62470") "medial medullary lamina of pallidum") AnnotationAssertion(Annotation( "FMA:62470") "medial medullary stria") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:235") Annotation( ) "globus pallidus, lamina medullaris interna") AnnotationAssertion(Annotation( "BTO:0002251") "internal medullary l. of corpus striatum") AnnotationAssertion(Annotation( "BTO:0002251") "l. medullaris interna corporis striati") AnnotationAssertion(Annotation( "NeuroNames:235") Annotation( ) "lamella pallidi interna") AnnotationAssertion(Annotation( "NeuroNames:235") Annotation( ) "lamina medullaris interna pallidi") AnnotationAssertion(Annotation( "NeuroNames:235") Annotation( ) "lamina medullaris medialis") AnnotationAssertion(Annotation( "NeuroNames:235") Annotation( ) "lamina pallidi interna") AnnotationAssertion(Annotation( "BAMS:mml") "medial medullary lamina of the globus pallidus") AnnotationAssertion(Annotation( "BTO:0002251") "medial medullary stria of corpus striatum") AnnotationAssertion( "UBERON:0002727") AnnotationAssertion(rdfs:label "medial medullary lamina of globus pallidus") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf(Annotation( "FMA"^^xsd:string) Annotation( "NIFSTD"^^xsd:string) ObjectSomeValuesFrom( )) DisjointClasses(Annotation( "lexical"^^xsd:string) ) # Class: (entorhinal cortex) AnnotationAssertion(Annotation( ) Annotation( "BIRNLEX:1508") "Component of the temporal lobe on the mesial surface. The rostral and caudal boundaries of the entorhinal cortex are the rostral end of the collateral sulcus and the caudal end of the amygdala respectively. The medial boundary is the medial aspect of the temporal lobe and the lateral boundary is the collateral sulcus. (DK).") AnnotationAssertion( "TODO - check area vs complex. MBA:909 this is part of the hippocampal formation via retrohippocampal region") AnnotationAssertion( "In primates it is found on the medial surface of the temporal lobe, partially bounded ventrolaterally by the collateral sulcus in the human and by the rhinal sulcus in the macaque. It is subdivided on the basis of internal structure into eight parts in the human ( Insausti-2004 ),and seven parts in the macaque ( Paxinos-2009a ). In the rat and mouse it is divided into a lateral part of the entorhinal area and a medial part of the entorhinal area; the latter is further divided into dorsal and ventral zones to produce three subdivisions in the rodent ( Swanson-2004 )") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:ENT") AnnotationAssertion( "BAMS:Ent") AnnotationAssertion( "BIRNLEX:1508") AnnotationAssertion( "BM:Tel-Cx-ENT") AnnotationAssertion( "BTO:0002650") AnnotationAssertion( "DHBA:10317") AnnotationAssertion( "DMBA:16102") AnnotationAssertion( "EFO:0001920") AnnotationAssertion( "EMAPA:35313") AnnotationAssertion( "FMA:72356") AnnotationAssertion( "GAID:636") AnnotationAssertion( "MA:0003117") AnnotationAssertion( "MBA:909") AnnotationAssertion( "MESH:A08.186.211.577.710.225") AnnotationAssertion( "NCIT:C97338") AnnotationAssertion( "PBA:294022158") AnnotationAssertion(Annotation( "BIRNLEX:1508") "UMLS:C0175196") AnnotationAssertion(Annotation( "ncithesaurus:Entorhinal_Cortex") "UMLS:C0175196") AnnotationAssertion(Annotation( "BIRNLEX:1508") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=168") AnnotationAssertion(Annotation( "ABA:ENT") Annotation( "BTO:0002650") Annotation( "FMA:72356") "entorhinal area") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0002650") "Brodmann's area 28") AnnotationAssertion(Annotation( "NeuroNames:168") Annotation( ) "area entorhinalis (28,34)") AnnotationAssertion(Annotation( "NeuroNames:168") Annotation( ) "area entorhinalis ventralis et dorsalis") AnnotationAssertion(Annotation( "NeuroNames:168") Annotation( ) "cortex entorhinalis") AnnotationAssertion(Annotation( "BIRNLEX:1508") Annotation( ) "entorhinal cortex") AnnotationAssertion( "UBERON:0002728") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "entorhinal cortex") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/f/f8/Gray-Brodman-Entorhinal_Cortex_EC_.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "BTO"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) # Class: (claustral amygdaloid area) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:ClA") AnnotationAssertion( "BAMS:VCl") AnnotationAssertion( "BIRNLEX:1515") AnnotationAssertion( "DHBA:10348") AnnotationAssertion( "FMA:61869") AnnotationAssertion(Annotation( "BIRNLEX:1515") "UMLS:C0262214") AnnotationAssertion(Annotation( "BIRNLEX:1515") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=251") AnnotationAssertion(Annotation( "FMA:61869") "claustrum diffusa") AnnotationAssertion(Annotation( "FMA:61869") "claustrum parvum") AnnotationAssertion(Annotation( "FMA:61869") "ventral claustrum") AnnotationAssertion(Annotation( "FMA:61869") "ventral portion of claustrum") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:251") Annotation( ) "area claustralis amygdalae") AnnotationAssertion(Annotation( "NeuroNames:251") "claustral amygdalar area") AnnotationAssertion( "UBERON:0002729") AnnotationAssertion(rdfs:label "claustral amygdaloid area") SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "NIF"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (obsolete regional part of thalamus) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A regional part of brain that is part of a thalamus [Automatically generated definition].") AnnotationAssertion( "BIRNLEX:1517") AnnotationAssertion( "FMA:67705") AnnotationAssertion( "SCTID:119406000") AnnotationAssertion(Annotation( "BIRNLEX:1517") "segment of thalamus") AnnotationAssertion(Annotation( "FMA:67705") "thalamus segment") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002730") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "obsolete regional part of thalamus") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (vestibulocochlear nerve root) AnnotationAssertion(Annotation( ) "Either of the two roots that come of the vestibulocochlear nerve.") AnnotationAssertion( ) AnnotationAssertion( "BAMS:8nf") AnnotationAssertion( "BIRNLEX:1519") AnnotationAssertion( "BIRNLEX:1636") AnnotationAssertion( "DHBA:12868") AnnotationAssertion( "DMBA:17746") AnnotationAssertion( "FMA:72499") AnnotationAssertion(Annotation( "FMA:72499") "central part of vestibulocochlear nerve") AnnotationAssertion(Annotation( "FMA:72499") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "fibrae nervi statoacustici") AnnotationAssertion(Annotation( "DHBA:12868") "root of vestibulocochlear nerve") AnnotationAssertion(Annotation( "FMA:72499") "statoacoustic nerve fibers") AnnotationAssertion(Annotation( "FMA:72499") "vestibulocochlear nerve fibers") AnnotationAssertion(Annotation( "FMA:72499") "vestibulocochlear nerve roots") AnnotationAssertion(Annotation( "FMA:72499") "vestibulocochlear nerve tract") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002731") AnnotationAssertion(rdfs:label "vestibulocochlear nerve root") SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (longitudinal pontine fibers) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:lfp") AnnotationAssertion( "BAMS:lp") AnnotationAssertion( "BIRNLEX:1523") AnnotationAssertion( "DHBA:12762") AnnotationAssertion( "FMA:72513") AnnotationAssertion( "HBA:265505502") AnnotationAssertion(Annotation( "BIRNLEX:1523") "UMLS:C0228450") AnnotationAssertion(Annotation( "BIRNLEX:1523") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=618") AnnotationAssertion(Annotation( "FMA:72513") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "fibrae pontis longitudinales") AnnotationAssertion(Annotation( "FMA:72513") "longitudinal fasciculus of the pons") AnnotationAssertion(Annotation( "FMA:72513") "longitudinal pontine fibers") AnnotationAssertion(Annotation( "FMA:72513") "longitudinal pontine fibres") AnnotationAssertion(Annotation( "FMA:72513") "longitudinal pontine tract") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:618") "corticofugal fibers") AnnotationAssertion(Annotation( "NeuroNames:618") Annotation( ) "fasiculii longitudinales pyramidales") AnnotationAssertion( "UBERON:0002732") AnnotationAssertion(rdfs:label "longitudinal pontine fibers") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf(Annotation( "NIFSTD"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (intralaminar nuclear group) AnnotationAssertion(Annotation( ) "The intralaminar nucleus is a nucleus of the thalamus that contains the following nuclei: central lateral centromedian (or 'central medial') paracentral parafascicular. Some sources also include a 'central dorsal' nucleus. [WP,unvetted].") AnnotationAssertion(Annotation( "BIRNLEX:1530") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "ILG") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:ILG") AnnotationAssertion( "BAMS:ILM") AnnotationAssertion( "BAMS:ING") AnnotationAssertion( "BIRNLEX:1530") AnnotationAssertion( "DHBA:10442") AnnotationAssertion( "EMAPA:35445") AnnotationAssertion( "FMA:62021") AnnotationAssertion( "GAID:660") AnnotationAssertion( "MA:0000871") AnnotationAssertion( "MBA:51") AnnotationAssertion( "MESH:A08.186.211.730.385.826.701.460") AnnotationAssertion(Annotation( "BIRNLEX:1530") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=317") AnnotationAssertion(Annotation( "DHBA:ILN") "intralaminar nuclear complex") AnnotationAssertion(Annotation( "FMA:62021") "intralaminar nuclear group") AnnotationAssertion(Annotation( "FMA:62021") "intralaminar nuclear group of thalamus") AnnotationAssertion(Annotation( "FMA:62021") "intralaminar nuclei of thalamus") AnnotationAssertion(Annotation( "FMA:62021") "intralaminar thalamic nuclei") AnnotationAssertion(Annotation( "FMA:62021") "nonspecific thalamic system") AnnotationAssertion(Annotation( "BIRNLEX:1530") "nuclei intralaminares (thalami)") AnnotationAssertion(Annotation( "FMA:62021") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "nuclei intralaminares thalami") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BAMS:ILM") "intralaminar group of the dorsal thalamus") AnnotationAssertion(Annotation( "BAMS:ILM") "intralaminar nuclei of the dorsal thalamus") AnnotationAssertion(Annotation( "BAMS:ILM") "intralaminar thalamic nuclear group") AnnotationAssertion(Annotation( "BAMS:ING") "intralaminar thalamic nuclear group") AnnotationAssertion( "UBERON:0002733") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "intralaminar nuclear group") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/b/ba/Thalmus.png"^^xsd:anyURI) SubClassOf( ) # Class: (superior temporal sulcus) AnnotationAssertion(Annotation( ) "The superior temporal sulcus is the sulcus separating the superior temporal gyrus from the middle temporal gyrus in the temporal lobe of the brain. The superior temporal sulcus is the first sulcus inferior to the lateral fissure. It is involved in the perception of where others are gazing and is thus important in determining where others' emotions are being directed. It is also involved in the perception of biological motion.") AnnotationAssertion(Annotation( "BIRNLEX:1534") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "STS") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:sts") AnnotationAssertion( "BIRNLEX:1534") AnnotationAssertion( "BM:Tel-Cx-STS") AnnotationAssertion( "DHBA:10629") AnnotationAssertion( "FMA:83783") AnnotationAssertion( "HBA:9378") AnnotationAssertion( "NCIT:C33700") AnnotationAssertion(Annotation( "BIRNLEX:1534") "UMLS:C0228237") AnnotationAssertion(Annotation( "ncithesaurus:Superior_Temporal_Sulcus") "UMLS:C0228237") AnnotationAssertion(Annotation( "BIRNLEX:1534") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=129") AnnotationAssertion(Annotation( "FMA:83783") "parallel sulcus") AnnotationAssertion(Annotation( "FMA:83783") "sulcus t1") AnnotationAssertion(Annotation( "FMA:83783") "superior temporal fissure") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:129") Annotation( ) "sulcus temporalis primus") AnnotationAssertion(Annotation( "NeuroNames:129") Annotation( ) "sulcus temporalis superior") AnnotationAssertion( "UBERON:0002734") AnnotationAssertion(rdfs:label "superior temporal sulcus") SubClassOf( ) # Class: (transverse pontine fibers) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:tfp") AnnotationAssertion( "BAMS:tpf") AnnotationAssertion( "BIRNLEX:1535") AnnotationAssertion( "DHBA:12795") AnnotationAssertion( "FMA:72514") AnnotationAssertion(Annotation( "BIRNLEX:1535") "UMLS:C0228446") AnnotationAssertion(Annotation( "BIRNLEX:1535") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=619") AnnotationAssertion(Annotation( "FMA:72514") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "fibrae pontis transversae") AnnotationAssertion(Annotation( "FMA:72514") "superficial transverse fibers of pons") AnnotationAssertion(Annotation( "FMA:72514") "transverse fibers of pons") AnnotationAssertion(Annotation( "FMA:72514") "transverse pontine fibers") AnnotationAssertion(Annotation( "FMA:72514") "transverse pontine fibres") AnnotationAssertion(Annotation( "FMA:72514") "transverse pontine tract") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:619") Annotation( ) "fibrae pontis superficiales") AnnotationAssertion(Annotation( "NeuroNames:619") Annotation( ) "fibrae transversae superficiales pontis") AnnotationAssertion(Annotation( "BAMS:tfp") "transverse fibers of the pons") AnnotationAssertion( "UBERON:0002735") AnnotationAssertion(rdfs:label "transverse pontine fibers") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf(Annotation( "NIFSTD"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (lateral nuclear group of thalamus) AnnotationAssertion(Annotation( ) "The lateral nuclear group is a collection of nuclei on the lateral side of the thalamus. According to MeSH, it consists of the following: lateral dorsal nucleus lateral posterior nucleus pulvinar [WP,unvetted].") AnnotationAssertion(Annotation( "BIRNLEX:1537") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "LNG") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:LAT") AnnotationAssertion( "BAMS:LNG") AnnotationAssertion( "BAMS:LTh") AnnotationAssertion( "BIRNLEX:1537") AnnotationAssertion( "CALOHA:TS-2028") AnnotationAssertion( "EMAPA:35487") AnnotationAssertion( "EV:0100210") AnnotationAssertion( "FMA:62174") AnnotationAssertion( "GAID:661") AnnotationAssertion( "HBA:12923") AnnotationAssertion( "MA:0000862") AnnotationAssertion( "MBA:138") AnnotationAssertion( "MESH:A08.186.211.730.385.826.701.485") AnnotationAssertion(Annotation( "BIRNLEX:1537") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=325") AnnotationAssertion(Annotation( "HBA:DTL") "lateral group of nuclei") AnnotationAssertion(Annotation( "BIRNLEX:1537") "lateral group of the dorsal thalamus") AnnotationAssertion(Annotation( "FMA:62174") "lateral nuclear group") AnnotationAssertion( "lateral nuclear group of dorsal thalamus") AnnotationAssertion(Annotation( "FMA:62174") "lateral nuclear group of thalamus") AnnotationAssertion(Annotation( "FMA:62174") "lateral nucleus of thalamus") AnnotationAssertion(Annotation( "MA:0000862") "lateral thalamic group") AnnotationAssertion(Annotation( "FMA:62174") "lateral thalamic nuclei") AnnotationAssertion(Annotation( "BIRNLEX:1537") "lateral thalamic nucleus") AnnotationAssertion(Annotation( "BIRNLEX:1537") "nuclei laterales thalami") AnnotationAssertion(Annotation( "BIRNLEX:1537") "nucleus lateralis thalami") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BAMS:LAT") "lateral thalamic nuclear group") AnnotationAssertion(Annotation( "BAMS:LTh") "lateral thalamic nuclear region") AnnotationAssertion( "UBERON:0002736") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "lateral nuclear group of thalamus") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/1/1b/ThalamicNuclei.png"^^xsd:anyURI) SubClassOf( ) DisjointClasses(Annotation( "lexical"^^xsd:string) ) # Class: (lateral inferior limiting sulcus) AnnotationAssertion( ) AnnotationAssertion( "BAMS:lils") AnnotationAssertion( "BIRNLEX:1540") AnnotationAssertion( "FMA:74523") AnnotationAssertion(Annotation( "BIRNLEX:1540") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=828") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:828") Annotation( ) "sulcus limitans inferior lateralis") AnnotationAssertion( "UBERON:0002737") AnnotationAssertion(rdfs:label "lateral inferior limiting sulcus") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (isthmus of cingulate gyrus) AnnotationAssertion(Annotation( "BIRNLEX:1541") "Component of the cingulate cortex. The rostral and caudal boundaries were the posterior division of the cingulate cortex and the parahippocampal gyrus respectively. The medial and lateral boundaries were the medial wall (area unknown) and the precuneus respectively (Christine Fennema-Notestine).") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:ICG") AnnotationAssertion( "BAMS:ICgG") AnnotationAssertion( "BIRNLEX:1541") AnnotationAssertion( "FMA:62502") AnnotationAssertion(Annotation( "BIRNLEX:1541") "UMLS:C0175192") AnnotationAssertion(Annotation( "BIRNLEX:1541") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=163") AnnotationAssertion(Annotation( "FMA:62502") "cingulate gyrus isthmus") AnnotationAssertion(Annotation( "FMA:62502") "isthmus of fornicate gyrus") AnnotationAssertion(Annotation( "FMA:62502") "isthmus of limbic lobe") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:163") Annotation( ) "isthmus cinguli") AnnotationAssertion(Annotation( "NeuroNames:163") Annotation( ) "isthmus gyri cingulatus") AnnotationAssertion(Annotation( "NeuroNames:163") Annotation( ) "isthmus gyri cinguli") AnnotationAssertion(Annotation( "BIRNLEX:1541") "isthmus of cingulate cortex") AnnotationAssertion(Annotation( "NeuroNames:163") Annotation( ) "isthmus of gyrus fornicatus") AnnotationAssertion(Annotation( "NeuroNames:163") "isthmus of the cingulate gyrus") AnnotationAssertion(Annotation( "NeuroNames:163") Annotation( ) "isthmus-2") AnnotationAssertion( "UBERON:0002738") AnnotationAssertion(rdfs:label "isthmus of cingulate gyrus") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (medial dorsal nucleus of thalamus) AnnotationAssertion(Annotation( ) "The medial dorsal nucleus (or dorsomedial nucleus of thalamus) is a large nucleus in the thalamus. It receives inputs from the Pre-Frontal Cortex and the Limbic System and in turn relays them to the Pre-Frontal Association Cortex. As a result, it plays a crucial role in attention, planning, organization, abstract thinking, multi-tasking and active memory. The connections of the medial dorsal nucleus have even been used to delineate the prefrontal cortex of the Göttingen minipig brain. By stereology the number of brain cells in the region has been estimated to around 6.43 million neurons in the adult human brain and 36.3 million glial cells, and with the newborn having quite different numbers: around 11.2 million neurons and 10.6 million glial cells. Lesions of the medial dorsal nucleus have been associated with Wernicke's encephalopathy [WP,unvetted].") AnnotationAssertion(Annotation( "FMA:62156") "dorsomedial nuclear group") AnnotationAssertion(Annotation( "FMA:62156") "dorsomedial nucleus") AnnotationAssertion(Annotation( "FMA:62156") "medial dorsal nucleus") AnnotationAssertion(Annotation( "FMA:62156") "medial nuclear group") AnnotationAssertion(Annotation( "FMA:62156") "medial thalamic nuclei") AnnotationAssertion(Annotation( "FMA:62156") "medial thalamic nucleus") AnnotationAssertion(Annotation( "FMA:62156") "mediodorsal nucleus") AnnotationAssertion(Annotation( "BIRNLEX:1543") "nucleus medialis dorsalis") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:MD") AnnotationAssertion( "BAMS:MED") AnnotationAssertion( "BAMS:MTh") AnnotationAssertion( "BIRNLEX:1543") AnnotationAssertion( "BM:Die-Th-MD") AnnotationAssertion( "BTO:0002453") AnnotationAssertion( "DHBA:10398") AnnotationAssertion( "EMAPA:35296") AnnotationAssertion( "EV:0100200") AnnotationAssertion( "FMA:62156") AnnotationAssertion( "GAID:663") AnnotationAssertion( "HBA:4401") AnnotationAssertion( "MA:0000863") AnnotationAssertion( "MBA:362") AnnotationAssertion( "MESH:A08.186.211.730.385.826.701.490") AnnotationAssertion( "NCIT:C32480") AnnotationAssertion(Annotation( "ncithesaurus:Dorsomedial_Nucleus_of_the_Thalamus") "UMLS:C0228329") AnnotationAssertion(Annotation( "BIRNLEX:1543") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=312") AnnotationAssertion(Annotation( "FMA:62156") "dorsal medial nucleus of thalamus") AnnotationAssertion(Annotation( "FMA:62156") "dorsomedial nucleus of thalamus") AnnotationAssertion(Annotation( "FMA:62156") "medial dorsal nucleus of thalamus") AnnotationAssertion(Annotation( "BIRNLEX:1543") "medial dorsal thalamic nucleus") AnnotationAssertion(Annotation( "FMA:62156") "medial nuclear group of thalamus") AnnotationAssertion(Annotation( "DHB:MD") "mediodorsal nucleus of thalamus") AnnotationAssertion(Annotation( "FMA:62156") "mediodorsal thalamic nucleus") AnnotationAssertion(Annotation( "BIRNLEX:1543") "nucleus dorsomedialis thalami") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BAMS:MED") "dorsal thalamus medial division") AnnotationAssertion(Annotation( "BAMS:MED") "medial group of the dorsal thalamus") AnnotationAssertion(Annotation( "BAMS:MED") "medial thalamic nuclear group") AnnotationAssertion(Annotation( "NeuroNames:312") "mediodorsal nucleus of the thalamus") AnnotationAssertion(Annotation( "NeuroNames:312") Annotation( ) "nuclei mediales (thalami)") AnnotationAssertion(Annotation( "NeuroNames:312") Annotation( ) "nucleus medialis dorsalis (Hassler)") AnnotationAssertion(Annotation( "NeuroNames:312") Annotation( ) "nucleus medialis dorsalis thalami") AnnotationAssertion(Annotation( ) Annotation( ) "nucleus mediodorsalis thalami") AnnotationAssertion(Annotation( "BTO:0002453") "nucleus mediodorsalis thalami") AnnotationAssertion(Annotation( "NeuroNames:312") Annotation( ) "nucleus thalamicus mediodorsalis") AnnotationAssertion( "UBERON:0002739") AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "Editor node: consider generic medial nuclear group and adding medioventral as sibling of this") AnnotationAssertion(rdfs:label "medial dorsal nucleus of thalamus") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/1/1b/ThalamicNuclei.png"^^xsd:anyURI) SubClassOf( ) DisjointClasses(Annotation( "lexical"^^xsd:string) ) # Class: (posterior cingulate gyrus) AnnotationAssertion(Annotation( ) "The posterior cingulate cortex is the backmost part of the cingulate cortex, lying behind the anterior cingulate cortex. This is the upper part of the 'limbic lobe'. The cingulate cortex is made up of an area around the midline of the brain. Surrounding areas include the retrosplenial cortex and the precuneus. Cytoarchitectonically posterior cingulate cortex is associated with Brodmann areas 23 and 31. [WP,unvetted].") AnnotationAssertion(Annotation( "BIRNLEX:1546") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "PCgG") AnnotationAssertion(Annotation( "FMA:61924") Annotation( "FMA:CMA") Annotation( ) "cGp") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:PCgG") AnnotationAssertion( "BIRNLEX:1546") AnnotationAssertion( "FMA:61924") AnnotationAssertion(Annotation( "BIRNLEX:1546") "UMLS:C0175191") AnnotationAssertion(Annotation( "BIRNLEX:1546") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=162") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:162") Annotation( ) "gyrus cinguli posterior") AnnotationAssertion(Annotation( "NeuroNames:162") Annotation( ) "gyrus limbicus posterior") AnnotationAssertion(Annotation( "NeuroNames:162") "posterior cingulate") AnnotationAssertion( "UBERON:0002740") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "posterior cingulate gyrus") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/f/fe/Gray727.svg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses(Annotation( "lexical"^^xsd:string) ) # Class: (diagonal band of Broca) AnnotationAssertion(Annotation( "BIRNLEX:1551") "A white fibre bundle descending in the precommissural septum toward the base of the forebrain, immediately rostral to the lamina terminalis; at the base, the bundle turns in the caudolateral direction; traveling through the ventral substantia innominata alongside the optic tract, it fades before reaching the amygdala.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:db") AnnotationAssertion( "BIRNLEX:1551") AnnotationAssertion( "BTO:0002445") AnnotationAssertion( "DHBA:12034") AnnotationAssertion( "FMA:61973") AnnotationAssertion( "GAID:684") AnnotationAssertion( "MESH:D020667") AnnotationAssertion(Annotation( "BIRNLEX:1551") "UMLS:C0175226") AnnotationAssertion(Annotation( "BIRNLEX:1551") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=285") AnnotationAssertion(Annotation( "FMA:61973") "broca's diagonal band") AnnotationAssertion(Annotation( "FMA:61973") "broca's diagonal gyrus") AnnotationAssertion(Annotation( "FMA:61973") "diagonal band") AnnotationAssertion( "diagonal band of Broca") AnnotationAssertion(Annotation( "FMA:61973") "diagonal gyrus") AnnotationAssertion(Annotation( "FMA:61973") "olfactory fasciculus") AnnotationAssertion( "olfactory radiations of Zuckerkandl") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0002445") "band of Broca") AnnotationAssertion(Annotation( "BTO:0002445") "bandaletta diagonalis (Broca)") AnnotationAssertion(Annotation( "NeuroNames:285") Annotation( ) "bandeletta diagonalis") AnnotationAssertion(Annotation( "BAMS:db") "diagonal band(Broca)") AnnotationAssertion(Annotation( "NeuroNames:285") Annotation( ) "fasciculus diagonalis Brocae") AnnotationAssertion(Annotation( "NeuroNames:285") Annotation( ) "fasciculus olfactorius") AnnotationAssertion(Annotation( "NeuroNames:285") Annotation( ) "fasciculus olfactorius (hippocampi)") AnnotationAssertion(Annotation( "NeuroNames:285") Annotation( ) "fasciculus olfactorius cornu Ammonis") AnnotationAssertion(Annotation( "NeuroNames:285") Annotation( ) "fasciculus septo-amygdalicus") AnnotationAssertion(Annotation( "NeuroNames:285") Annotation( ) "gyrus diagonalis") AnnotationAssertion(Annotation( "NeuroNames:285") Annotation( ) "gyrus diagonalis rhinencephli") AnnotationAssertion(Annotation( ) Annotation( ) "stria diagonalis") AnnotationAssertion(Annotation( "BTO:0002445") "stria diagonalis") AnnotationAssertion(Annotation( "BTO:0002445") "stria diagonalis (Broca)") AnnotationAssertion( "UBERON:0002741") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "diagonal band of Broca") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/d/d7/Gray724.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (lamina of septum pellucidum) AnnotationAssertion(Annotation( ) "One of two layers of both white and gray matter of the septum pellucidum. During fetal development there is a space between the two laminae called the cavum septum pellucidum which, in ninety per cent of cases, disappears during infancy.") AnnotationAssertion(Annotation( "FMA"^^xsd:string) "FMA classifies as white matter") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:lsp") AnnotationAssertion( "BIRNLEX:1554") AnnotationAssertion( "FMA:62472") AnnotationAssertion(Annotation( "BIRNLEX:1554") "UMLS:C0152278") AnnotationAssertion(Annotation( "BIRNLEX:1554") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=258") AnnotationAssertion(Annotation( ) "laminae septi pellucidi") AnnotationAssertion(Annotation( "FMA:62472") "septum pellucidum lamina") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:258") "lamina of the septum pellucidum") AnnotationAssertion(Annotation( "NeuroNames:258") Annotation( ) "lamina septi pellucidi") AnnotationAssertion( "UBERON:0002742") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "lamina of septum pellucidum") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (basal forebrain) AnnotationAssertion(Annotation( "BIRNLEX:1560") "A region of the brain consisting of ventral and rostral subcortical regions of the telencephalon, including among others, the basal ganglia, septal nuclei, amygdala, ventral pallidum, substantia innominata, and basal nucleus of Meynert.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:Basal_forebrain") AnnotationAssertion( "BIRNLEX:1560") AnnotationAssertion( "BM:Tel-BF") AnnotationAssertion( "BTO:0002444") AnnotationAssertion( "DHBA:10349") AnnotationAssertion( "EMAPA:35164") AnnotationAssertion( "FMA:77700") AnnotationAssertion( "HBA:4300") AnnotationAssertion( "PBA:128012976") AnnotationAssertion(Annotation( "BIRNLEX:1560") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=1997") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:1997") "basal forebrain area") AnnotationAssertion(Annotation( ) Annotation( ) "pars basalis telencephali") AnnotationAssertion( "UBERON:0002743") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "basal forebrain") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/a/a4/Basal_Forebrain_Monakhos_2007.png"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "BTO"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (hilum of dentate nucleus) AnnotationAssertion(Annotation( ) "The mouth of the flasklike dentate nucleus of the cerebellum, directed inward (rostromedial), and giving exit to many of the fibers that compose the superior cerebellar peduncle or brachium conjunctivum.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:hdt") AnnotationAssertion( "BIRNLEX:1561") AnnotationAssertion( "FMA:72548") AnnotationAssertion(Annotation( "BIRNLEX:1561") "UMLS:C1289484") AnnotationAssertion(Annotation( "BIRNLEX:1561") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=687") AnnotationAssertion(Annotation( "FMA:72548") "dentate nuclear hilum") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:687") Annotation( ) "hilum nuclei dentati") AnnotationAssertion(Annotation( "NeuroNames:687") "hilum of the dentate nucleus") AnnotationAssertion( "UBERON:0002744") AnnotationAssertion(rdfs:label "hilum of dentate nucleus") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf(Annotation( "NIFSTD"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (ventral amygdalofugal projection) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:vaf") AnnotationAssertion( "BIRNLEX:1563") AnnotationAssertion( "FMA:61977") AnnotationAssertion(Annotation( "BIRNLEX:1563") "UMLS:C0175242") AnnotationAssertion(Annotation( "BIRNLEX:1563") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=287") AnnotationAssertion(Annotation( "FMA:61977") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "projectiones ventrales amygdalae") AnnotationAssertion(Annotation( "BIRNLEX:1563") "ventral amygdalofugal pathway") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:287") Annotation( ) "tractus amygdalofugalis ventralis") AnnotationAssertion( "UBERON:0002745") AnnotationAssertion(rdfs:label "ventral amygdalofugal projection") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (intermediate periventricular nucleus) AnnotationAssertion(Annotation( "BIRNLEX:1564") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "IPe") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:IPe") AnnotationAssertion( "BAMS:PVI") AnnotationAssertion( "BIRNLEX:1564") AnnotationAssertion( "FMA:62328") AnnotationAssertion( "MBA:118") AnnotationAssertion(Annotation( "BIRNLEX:1564") "UMLS:C0694604") AnnotationAssertion(Annotation( "BIRNLEX:1564") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=394") AnnotationAssertion(Annotation( "FMA:62328") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "hPe") AnnotationAssertion(Annotation( "FMA:62328") "intermediate periventricular nucleus of hypothalamus") AnnotationAssertion(Annotation( "FMA:62328") "periventricular nucleus at the tuberal level") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BAMS:IPe") "intermediate periventricular hypothalamic nucleus") AnnotationAssertion(Annotation( "BAMS:PVI") "intermediate periventricular nucleus of the hypothalamus") AnnotationAssertion(Annotation( "NeuroNames:394") Annotation( ) "nucleus periventricularis hypothalami") AnnotationAssertion(Annotation( "NeuroNames:394") "periventricular hypothalamic nucleus, intermediate part") AnnotationAssertion( "UBERON:0002746") AnnotationAssertion(rdfs:label "intermediate periventricular nucleus") SubClassOf( ) SubClassOf(Annotation( "NIFSTD"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (neodentate part of dentate nucleus) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:NDt") AnnotationAssertion( "BIRNLEX:1567") AnnotationAssertion( "FMA:72539") AnnotationAssertion(Annotation( "BIRNLEX:1567") "UMLS:C0175485") AnnotationAssertion(Annotation( "BIRNLEX:1567") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=684") AnnotationAssertion(Annotation( "FMA:72539") "neodentate portion of dentate nucleus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:684") "neodentate portion of the dentate nucleus") AnnotationAssertion(Annotation( "NeuroNames:684") Annotation( ) "pars neodentata") AnnotationAssertion( "UBERON:0002747") AnnotationAssertion(rdfs:label "neodentate part of dentate nucleus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (medial lemniscus of medulla) AnnotationAssertion(Annotation( "BIRNLEX:1570") "Part of medial lemniscus located within the medulla.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:mlm") AnnotationAssertion( "BIRNLEX:1570") AnnotationAssertion( "FMA:72621") AnnotationAssertion(Annotation( "BIRNLEX:1570") "UMLS:C0228534") AnnotationAssertion(Annotation( "BIRNLEX:1570") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=787") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "medulla medial lemniscus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:787") Annotation( ) "lemniscus medialis (myelencephali)") AnnotationAssertion(Annotation( "NeuroNames:787") "medial lemniscus of the medulla") AnnotationAssertion( "UBERON:0002748") AnnotationAssertion(rdfs:label "medial lemniscus of medulla") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf(Annotation( "FMA"^^xsd:string) Annotation( "NIFSTD"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "NIFSTD"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (regional part of cerebellar cortex) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A regional part of brain that is part of a cerebellar cortex [Automatically generated definition].") AnnotationAssertion( "BIRNLEX:1571") AnnotationAssertion( "FMA:76924") AnnotationAssertion(Annotation( "FMA:76924") "cerebellar cortical segment") AnnotationAssertion(Annotation( "BIRNLEX:1571") "segment of cerebellar cortex") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002749") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "regional part of cerebellar cortex") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (medial longitudinal fasciculus of medulla) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A medial longitudinal fasciculus that is part of a medulla [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:mlfm") AnnotationAssertion( "BIRNLEX:1574") AnnotationAssertion( "FMA:72618") AnnotationAssertion(Annotation( "BIRNLEX:1574") "UMLS:C0228536") AnnotationAssertion(Annotation( "BIRNLEX:1574") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=784") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "medial longitudinal fasciculus of medulla oblongata") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "medulla medial longitudinal fasciculus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:784") Annotation( ) "fasciculus longitudinalis medialis (myelencephali)") AnnotationAssertion(Annotation( "NeuroNames:784") "medial longitudinal fasciculus of the medulla") AnnotationAssertion( "UBERON:0002750") AnnotationAssertion(rdfs:label "medial longitudinal fasciculus of medulla") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (inferior temporal gyrus) AnnotationAssertion(Annotation( "BIRNLEX:1577") "Component of the temporal lobe, lateral aspect. The rostral boundary is the rostral extent of the inferior temporal sulcus whereas the caudal boundary is designated as the temporo-occipital incisure on the cortical surface. The occipitotemporal sulcus is the medial boundary and the inferior temporal sulcus is the lateral boundary (Christine Fennema-Notestine).") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:ITG") AnnotationAssertion( "BIRNLEX:1577") AnnotationAssertion( "BM:Tel-ITG") AnnotationAssertion( "DHBA:12142") AnnotationAssertion( "FMA:61907") AnnotationAssertion( "HBA:4147") AnnotationAssertion( "NCIT:C32791") AnnotationAssertion(Annotation( "BIRNLEX:1577") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=138") AnnotationAssertion( "ncithesaurus:Inferior_Temporal_Gyrus") AnnotationAssertion(Annotation( "BIRNLEX:1577") "gyrus temporalis inferior") AnnotationAssertion( "lateral occipitotemporal gyrus (heimer-83)") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "IT cortex") AnnotationAssertion(Annotation( ) Annotation( ) "gyrus temporalis inferior") AnnotationAssertion(Annotation( ) "inferotemporal cortex") AnnotationAssertion( "UBERON:0002751") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "inferior temporal gyrus") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/3/35/Gray726.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (olivocerebellar tract) AnnotationAssertion(Annotation( ) "The olivocerebellar tract (olivocerebellar fibers) leaves the olivary nucleus and pass out through the hilum and decussate with those from the opposite olive in the raphé, then as internal arcuate fibers they pass partly through and partly around the opposite olive and enter the inferior peduncle to be distributed to the cerebellar hemisphere of the opposite side from which they arise. They terminate directly on Purkinje cells as the climbing fiber input system. [WP,unvetted].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:oc") AnnotationAssertion( "BAMS:oct") AnnotationAssertion( "BIRNLEX:1579") AnnotationAssertion( "DHBA:12747") AnnotationAssertion( "FMA:72638") AnnotationAssertion( "MBA:404") AnnotationAssertion(Annotation( "BIRNLEX:1579") "UMLS:C0175557") AnnotationAssertion(Annotation( "BIRNLEX:1579") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=804") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:804") Annotation( ) "fibrae olivocerebellares") AnnotationAssertion(Annotation( "NeuroNames:804") "olivocerebellar fibers") AnnotationAssertion(Annotation( ) Annotation( ) "t. olivocerebellaris") AnnotationAssertion(Annotation( "NeuroNames:804") Annotation( ) "tractus olivocerebellaris") AnnotationAssertion( "UBERON:0002752") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "olivocerebellar tract") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/9/93/Gray695.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (posterior spinocerebellar tract) AnnotationAssertion(Annotation( "BIRNLEX:1585") "It ascends the dorsal part of the lateral funiculus and enters the cerebellum via the restiform body. Within the cerebellum, its axons terminate in the ipsilateral hindlimb area of the anterior lobe and in the pyramis and the paramedian lobule predominantly ipsilaterally. Rostrally, it extends to lobules I and II. Afferents from the upper trunk, forelimbs, and the neck to the cerebellum.") AnnotationAssertion(Annotation( ) "The dorsal spinocerebellar tract (posterior spinocerebellar tract, Flechsig's fasciculus, Flechsig's tract) conveys proprioceptive information from the body to the cerebellum. It is part of the somatosensory system and runs in parallel with the ventral spinocerebellar tract. Proprioceptive information is taken to the via central processes of dorsal root ganglia (first order neurons). These central processes travel through the dorsal horn where they synapse with second order neurons of Clarke's nucleus. Axon fibers from Clarke's Nucleus convey this proprioceptive information in the spinal cord in the peripheral region of the posteriolateral funiculus ipsilaterally until it reaches the cerebellum, where unconscious proprioceptive information is processed. This tract involves two neurons and ends up on the same side of the body. [WP,unvetted][Wikipedia:Dorsal_spinocerebellar_tract].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:dsc") AnnotationAssertion( "BAMS:psc") AnnotationAssertion( "BAMS:sctd") AnnotationAssertion( "BIRNLEX:1585") AnnotationAssertion( "BM:DSCT") AnnotationAssertion( "DHBA:12746") AnnotationAssertion( "DMBA:17761") AnnotationAssertion( "FMA:72641") AnnotationAssertion( "MBA:553") AnnotationAssertion(Annotation( "BIRNLEX:1585") "UMLS:C0175560") AnnotationAssertion(Annotation( "BIRNLEX:1585") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=807") AnnotationAssertion(Annotation( "FMA:72641") "dorsal spinocerebellar tract") AnnotationAssertion(Annotation( "FMA:72641") "flechsig's tract") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:807") "dorsal spinocerebellar tract of the medulla") AnnotationAssertion( "UBERON:0002753") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "posterior spinocerebellar tract") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/b/b2/Spinal_cord_tracts_-_English.svg"^^xsd:anyURI) AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/f/fe/Medulla_spinalis_-_tracts_-_English.svg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses(Annotation( "lexical"^^xsd:string) ) # Class: (predorsal bundle) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:pd") AnnotationAssertion( "BIRNLEX:1590") AnnotationAssertion( "FMA:72614") AnnotationAssertion(Annotation( "BIRNLEX:1590") "UMLS:C0175542") AnnotationAssertion(Annotation( "BIRNLEX:1590") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=780") AnnotationAssertion( "predorsal bundle of Edinger") AnnotationAssertion(Annotation( "FMA:72614") "predorsal fasciculus") AnnotationAssertion(Annotation( "FMA:72614") "tectospinal fibers") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:780") Annotation( ) "fasciculus praedorsalis (Tschermak)") AnnotationAssertion(Annotation( "NeuroNames:780") Annotation( ) "fasciculus predorsalis") AnnotationAssertion( "UBERON:0002754") AnnotationAssertion(rdfs:label "predorsal bundle") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pyramidal decussation) AnnotationAssertion(Annotation( "BIRNLEX:1594") "Part of medulla comprising a white matter structure containing nerve fibers of the pyramidal tract crossing from one side of the brain to the other (MM).") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:pyd") AnnotationAssertion( "BAMS:pyx") AnnotationAssertion( "BIRNLEX:1594") AnnotationAssertion( "BM:Me-PyX") AnnotationAssertion( "DHBA:12772") AnnotationAssertion( "DMBA:17760") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37945") AnnotationAssertion( "FMA:72633") AnnotationAssertion( "HBA:12965") AnnotationAssertion( "MBA:198") AnnotationAssertion(Annotation( "BIRNLEX:1594") "UMLS:C0011128") AnnotationAssertion(Annotation( "BIRNLEX:1594") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=799") AnnotationAssertion(Annotation( "FMA:72633") "corticospinal decussation") AnnotationAssertion(Annotation( "FMA:72633") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "decussatio pyramidum") AnnotationAssertion(Annotation( "FMA:72633") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "decussatio pyramidum medullae oblongatae") AnnotationAssertion(Annotation( "FMA:72633") "decussation of corticospinal tract") AnnotationAssertion(Annotation( "FMA:72633") "decussation of pyramidal tract fibers") AnnotationAssertion(Annotation( "FMA:72633") "decussation of pyramids") AnnotationAssertion(Annotation( "FMA:72633") "decussation of pyramids of medulla") AnnotationAssertion(Annotation( "BIRNLEX:1594") "decussation of the pyramidal tract") AnnotationAssertion(Annotation( "FMA:72633") "motor decussation") AnnotationAssertion(Annotation( "FMA:72633") "motor decussation of medulla") AnnotationAssertion(Annotation( "BIRNLEX:1594") "pyramidal decussation (pourfour du petit)") AnnotationAssertion(Annotation( "DMBA:dpy") "pyramidal tract decussation") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:799") Annotation( ) "decussatio motoria") AnnotationAssertion(Annotation( ) "pyramidal decussation") AnnotationAssertion( "UBERON:0002755") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "pyramidal decussation") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/a/ac/Gray684.png"^^xsd:anyURI) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf(Annotation( "NIFSTD"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (anterior cingulate gyrus) AnnotationAssertion(Annotation( "FMA:61916") Annotation( "FMA:CMA") Annotation( ) "cGa") AnnotationAssertion(Annotation( ) "cingulate gyrus, anterior division") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:ACgG") AnnotationAssertion( "BIRNLEX:1603") AnnotationAssertion( "FMA:61916") AnnotationAssertion(Annotation( "BIRNLEX:1603") "UMLS:C0175190") AnnotationAssertion(Annotation( "BIRNLEX:1603") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=161") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:161") "anterior cingulate") AnnotationAssertion(Annotation( "NeuroNames:161") Annotation( ) "cortex cingularis anterior") AnnotationAssertion(Annotation( "NeuroNames:161") Annotation( ) "gyrus cinguli anterior") AnnotationAssertion(Annotation( "NeuroNames:161") Annotation( ) "gyrus limbicus anterior") AnnotationAssertion( "UBERON:0002756") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "anterior cingulate gyrus") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/2/22/Gray727_anterior_cingulate_cortex.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete regional part of epithalamus) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A regional part of brain that is part of a epithalamus [Automatically generated definition].") AnnotationAssertion( "BIRNLEX:1607") AnnotationAssertion( "FMA:62013") AnnotationAssertion(Annotation( "FMA:62013") "epithalamus segment") AnnotationAssertion(Annotation( "BIRNLEX:1607") "segment of epithalamus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002757") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "obsolete regional part of epithalamus") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (dorsal nucleus of medial geniculate body) AnnotationAssertion(Annotation( "BIRNLEX:1608") "Dorsal division of the medial geniculate nucleus, as first defined by Morest (1964) in the cat, but also described in the rat. It fills all but the medial edge of the posterior tip in cat, and joins the lateral thalamic nucleus anteriorly (http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1261345/?page=3).") AnnotationAssertion(Annotation( "BIRNLEX:1608") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "DMG") AnnotationAssertion(Annotation( "BIRNLEX:1608") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "MGD") AnnotationAssertion( ) AnnotationAssertion( "BAMS:DMG") AnnotationAssertion( "BAMS:MGD") AnnotationAssertion( "BAMS:MGd") AnnotationAssertion( "BIRNLEX:1608") AnnotationAssertion( "BTO:0002673") AnnotationAssertion( "DHBA:10435") AnnotationAssertion( "FMA:62216") AnnotationAssertion( "HBA:265504828") AnnotationAssertion( "MBA:1072") AnnotationAssertion(Annotation( "BIRNLEX:1608") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=356") AnnotationAssertion(Annotation( "FMA:62216") "dorsal nucleus of medial geniculate complex") AnnotationAssertion(Annotation( "BIRNLEX:1608") "medial geniculate complex, dorsal part") AnnotationAssertion(Annotation( "BIRNLEX:1608") "medial geniculate nucleus, dorsal part") AnnotationAssertion(Annotation( "BIRNLEX:1608") "nucleus corporis geniculati medialis, pars dorsalis") AnnotationAssertion(Annotation( "FMA:62216") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "nucleus dorsalis corporis geniculati medialis") AnnotationAssertion(Annotation( "BIRNLEX:1608") "nucleus geniculatus medialis fibrosus (hassler)") AnnotationAssertion(Annotation( "BIRNLEX:1608") "nucleus geniculatus medialis pars dorsalis") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BAMS:MGD") "dorsal medial geniculate nucleus") AnnotationAssertion(Annotation( "NeuroNames:356") "dorsal nucleus of the medial geniculate body") AnnotationAssertion(Annotation( "BAMS:MGd") "medial geniculate complex dorsal part") AnnotationAssertion(Annotation( "BAMS:MGD") "medial geniculate nucleus dorsal part") AnnotationAssertion(Annotation( "BAMS:MGd") "medial geniculate nucleus dorsal part") AnnotationAssertion(Annotation( "BTO:0002673") "nucleus dorsalis coporis geniculati medialis") AnnotationAssertion( "UBERON:0002758") AnnotationAssertion(rdfs:label "dorsal nucleus of medial geniculate body") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (magnocellular nucleus of medial geniculate body) AnnotationAssertion(Annotation( "BIRNLEX:1612") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "MMG") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:MGM") AnnotationAssertion( "BAMS:MGm") AnnotationAssertion( "BAMS:MMG") AnnotationAssertion( "BIRNLEX:1612") AnnotationAssertion( "BTO:0002672") AnnotationAssertion( "DHBA:10439") AnnotationAssertion( "FMA:62218") AnnotationAssertion( "HBA:4448") AnnotationAssertion( "MBA:1088") AnnotationAssertion(Annotation( "BIRNLEX:1612") "UMLS:C0175296") AnnotationAssertion(Annotation( "BIRNLEX:1612") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=358") AnnotationAssertion(Annotation( "BIRNLEX:1612") "corpus geniculatus mediale, pars magnocelluaris") AnnotationAssertion(Annotation( "BIRNLEX:1612") "magnocelluar nucleus of medial geniculate complex") AnnotationAssertion(Annotation( "FMA:62218") "medial division of medial geniculate body") AnnotationAssertion(Annotation( "FMA:62218") "medial geniculate complex, medial part") AnnotationAssertion(Annotation( "FMA:62218") "medial geniculate nucleus, medial part") AnnotationAssertion(Annotation( "FMA:62218") "medial magnocellular nucleus of medial geniculate body") AnnotationAssertion(Annotation( "FMA:62218") "medial nucleus of medial geniculate body") AnnotationAssertion(Annotation( "BIRNLEX:1612") "nucleus corporis geniculati medialis, pars magnocelluaris") AnnotationAssertion(Annotation( "BIRNLEX:1612") "nucleus geniculatus medialis magnocelluaris (hassler)") AnnotationAssertion(Annotation( "BIRNLEX:1612") "nucleus geniculatus medialis, pars magnocelluaris") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:358") Annotation( ) "corpus geniculatus mediale, pars magnocellularis") AnnotationAssertion(Annotation( "BAMS:MGM") "magnocellular medial geniculate nucleus") AnnotationAssertion(Annotation( "NeuroNames:358") "magnocellular nucleus of medial geniculate complex") AnnotationAssertion(Annotation( "NeuroNames:358") "magnocellular nucleus of the medial geniculate body") AnnotationAssertion(Annotation( "BAMS:MGm") "medial geniculate complex medial part") AnnotationAssertion(Annotation( "BAMS:MGM") "medial geniculate nucleus medial part") AnnotationAssertion(Annotation( "BAMS:MGm") "medial geniculate nucleus medial part") AnnotationAssertion(Annotation( "NeuroNames:358") Annotation( ) "nucleus corporis geniculati medialis, pars magnocellularis") AnnotationAssertion(Annotation( "NeuroNames:358") Annotation( ) "nucleus geniculatus medialis magnocellularis (Hassler)") AnnotationAssertion(Annotation( "NeuroNames:358") Annotation( ) "nucleus geniculatus medialis, pars magnocellularis") AnnotationAssertion(Annotation( "BTO:0002672") "nucleus medialis magnocellularis corporis geniculati medialis") AnnotationAssertion( "UBERON:0002759") AnnotationAssertion(rdfs:label "magnocellular nucleus of medial geniculate body") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (ventral corticospinal tract) AnnotationAssertion(Annotation( "BIRNLEX:1618") "Part of pyramidal tract (corticospinal tract) containing uncrossed fibers and traveling in the ventral funiculus of the spinal cord.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:vcsp") AnnotationAssertion( "BIRNLEX:1618") AnnotationAssertion( "DHBA:12798") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37889") AnnotationAssertion( "FMA:72636") AnnotationAssertion( "MBA:1028") AnnotationAssertion(Annotation( "BIRNLEX:1618") "UMLS:C0152403") AnnotationAssertion(Annotation( "BIRNLEX:1618") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=802") AnnotationAssertion(Annotation( "FMA:72636") "anterior corticospinal tract") AnnotationAssertion(Annotation( "FMA:72636") "anterior pyramidal tract") AnnotationAssertion(Annotation( "FMA:72636") "anterior tract of turck") AnnotationAssertion(Annotation( "FMA:72636") "bundle of Turck") AnnotationAssertion(Annotation( "FMA:72636") "column of Turck") AnnotationAssertion(Annotation( "MBA:1028") "corticospinal tract, uncrossed") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:2955") "anterior cerebrospinal fasciculus") AnnotationAssertion(Annotation( "NeuroNames:2955") "anterior corticospinal tract") AnnotationAssertion(Annotation( "NeuroNames:802") "anterior corticospinal tract of the medulla") AnnotationAssertion(Annotation( "NeuroNames:2955") "bundle of Turck") AnnotationAssertion(Annotation( "NeuroNames:2955") "corticospinal tract, uncrossed") AnnotationAssertion(Annotation( "NeuroNames:2955") "direct corticospinal tract") AnnotationAssertion(Annotation( "NeuroNames:2955") "medial corticospinal tract") AnnotationAssertion(Annotation( "NeuroNames:802") Annotation( ) "tractus corticospinalis anterior") AnnotationAssertion(Annotation( "NeuroNames:802") Annotation( ) "tractus corticospinalis ventralis") AnnotationAssertion(Annotation( "NeuroNames:2955") "uncrossed corticospinal tract") AnnotationAssertion(Annotation( "NeuroNames:2955") "ventral corticospinal tract") AnnotationAssertion( "UBERON:0002760") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "ventral corticospinal tract") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/f/fe/Medulla_spinalis_-_tracts_-_English.svg"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "NIFSTD"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "modified part_of to overlaps") Annotation( "NIFSTD"^^xsd:string) ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) # Class: (inferior frontal sulcus) AnnotationAssertion(Annotation( ) "The inferior frontal sulcus is a sulcus between the middle frontal gyrus and the inferior frontal gyrus. [WP,unvetted].") AnnotationAssertion(Annotation( "BIRNLEX:1619") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "IFRS") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:ifrs") AnnotationAssertion( "BAMS:ifs") AnnotationAssertion( "BIRNLEX:1619") AnnotationAssertion( "DHBA:10631") AnnotationAssertion( "FMA:83757") AnnotationAssertion( "HBA:9357") AnnotationAssertion( "NCIT:C32776") AnnotationAssertion(Annotation( "ncithesaurus:Inferior_Frontal_Sulcus") "UMLS:C0262251") AnnotationAssertion(Annotation( "BIRNLEX:1619") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=63") AnnotationAssertion(Annotation( "FMA:83757") "inferior frontal fissure") AnnotationAssertion(Annotation( "FMA:83757") "sulcus f2") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "sulcus frontalis inferior") AnnotationAssertion(Annotation( "NeuroNames:63") Annotation( ) "sulcus frontalis secundus") AnnotationAssertion( "UBERON:0002761") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "inferior frontal sulcus") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/7/72/Gray726_Inferior_frontal_sulcus.svg"^^xsd:anyURI) SubClassOf( ) # Class: (internal medullary lamina of thalamus) AnnotationAssertion(Annotation( "BIRNLEX:1621") "Predominantly white regional part of thalamus consisting of a Y shaped bundle of fibers that runs the anterior-posterior length of thalamus and divides the thalamus into roughly three regions (MM: 2006-10-26).") AnnotationAssertion(Annotation( ) "lamina medullaris medialis") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:im") AnnotationAssertion( "BAMS:iml") AnnotationAssertion( "BIRNLEX:1621") AnnotationAssertion( "DHBA:12063") AnnotationAssertion( "FMA:62079") AnnotationAssertion( "HBA:265505134") AnnotationAssertion( "MBA:14") AnnotationAssertion(Annotation( "BIRNLEX:1621") "UMLS:C0228322") AnnotationAssertion(Annotation( "FMA:62079") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "envelope (involucrum medial) (Hassler)") AnnotationAssertion(Annotation( "FMA:62079") "internal medullary lamina") AnnotationAssertion(Annotation( "FMA:62079") "internal medullary lamina of thalamus") AnnotationAssertion(Annotation( "FMA:62079") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "lamina medullaris interna") AnnotationAssertion(Annotation( "FMA:62079") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "lamina medullaris interna thalami") AnnotationAssertion(Annotation( "FMA:62079") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "lamina medullaris medialis thalami") AnnotationAssertion(Annotation( "FMA:62079") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "lamina medullaris thalami interna") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BAMS:im") "internal medullary lamina of the thalamus") AnnotationAssertion(Annotation( "BAMS:iml") "internal medullary lamina of the thalamus") AnnotationAssertion( "UBERON:0002762") AnnotationAssertion(rdfs:label "internal medullary lamina of thalamus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (accessory medullary lamina of globus pallidus) AnnotationAssertion(Annotation( "BIRNLEX:1626") "Thin bundle of myelinated axons that divides the medial pallidal segment into outer and inner portions (Carpenter, Core Text of Neuroanatomy, 3rd ed., 1985, pg. 303).") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:aml") AnnotationAssertion( "BAMS:icml") AnnotationAssertion( "BIRNLEX:1626") AnnotationAssertion( "FMA:62471") AnnotationAssertion(Annotation( "BIRNLEX:1626") "UMLS:C0175213") AnnotationAssertion(Annotation( "BIRNLEX:1626") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=236") AnnotationAssertion(Annotation( "BIRNLEX:1626") "accessory medullar lamina of pallidum") AnnotationAssertion(Annotation( "FMA:62471") "accessory medullary lamina") AnnotationAssertion(Annotation( "FMA:62471") "accessory medullary lamina of corpus striatum") AnnotationAssertion(Annotation( "FMA:62471") "accessory medullary lamina of globus pallidus") AnnotationAssertion(Annotation( "FMA:62471") "accessory medullary lamina pallidus") AnnotationAssertion(Annotation( "FMA:62471") "incomplete medullary lamina of globus pallidus") AnnotationAssertion(Annotation( "FMA:62471") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "lamina medullaris accessoria corporis striati") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:236") "accessory medullary lamina of pallidum") AnnotationAssertion(Annotation( "BAMS:icml") "incomplete medullary lamina of the globus pallidus") AnnotationAssertion(Annotation( "NeuroNames:236") Annotation( ) "lamella pallidi incompleta") AnnotationAssertion(Annotation( "NeuroNames:236") Annotation( ) "lamina medullaris accessoria") AnnotationAssertion(Annotation( "NeuroNames:236") Annotation( ) "lamina medullaris incompleta pallidi") AnnotationAssertion(Annotation( "NeuroNames:236") Annotation( ) "lamina pallidi incompleta") AnnotationAssertion( "UBERON:0002763") AnnotationAssertion(rdfs:label "accessory medullary lamina of globus pallidus") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf(Annotation( "NIFSTD"^^xsd:string) ObjectSomeValuesFrom( )) DisjointClasses(Annotation( "NIFSTD"^^xsd:string) ) # Class: (inferior precentral sulcus) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:iprs") AnnotationAssertion( "BIRNLEX:1627") AnnotationAssertion( "FMA:83764") AnnotationAssertion(Annotation( "BIRNLEX:1627") "UMLS:C0262257") AnnotationAssertion(Annotation( "BIRNLEX:1627") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=72") AnnotationAssertion(Annotation( "FMA:83764") "inferior part of precentral fissure") AnnotationAssertion(Annotation( "BIRNLEX:1627") "sulcus praecentralis inferior") AnnotationAssertion(Annotation( "BIRNLEX:1627") "sulcus precentralis inferior") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002764") AnnotationAssertion(rdfs:label "inferior precentral sulcus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lateral medullary lamina of globus pallidus) AnnotationAssertion(Annotation( "NeuroNames:234") "The lateral medullary lamina is a thin white structure located in the basal ganglia of the primate brain. Bounded laterally by the putamen and medially by the globus pallidus, it is defined on the basis of Nissl or myelin stain ( Carpenter-1983 ).") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:lml") AnnotationAssertion( "BIRNLEX:1634") AnnotationAssertion( "DHBA:12037") AnnotationAssertion( "FMA:62469") AnnotationAssertion( "HBA:265505086") AnnotationAssertion(Annotation( "BIRNLEX:1634") "UMLS:C0152339") AnnotationAssertion(Annotation( "BIRNLEX:1634") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=234") AnnotationAssertion(Annotation( "BIRNLEX:1634") "external medulary lamina of globus pallidus") AnnotationAssertion(Annotation( "BIRNLEX:1634") "external medulary lamina of lentiform nucleus") AnnotationAssertion(Annotation( "FMA:62469") "external medullary lamina of corpus striatum") AnnotationAssertion(Annotation( "FMA:62469") "external medullary lamina of globus pallidus") AnnotationAssertion(Annotation( "FMA:62469") "external medullary lamina of lentiform nucleus") AnnotationAssertion(Annotation( "FMA:62469") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "lamina medullaris externa corporis striati") AnnotationAssertion(Annotation( "FMA:62469") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "lamina medullaris lateralis corporis striati") AnnotationAssertion(Annotation( "BIRNLEX:1634") "lateral medulary lamina of globus pallidus") AnnotationAssertion(Annotation( "BIRNLEX:1634") "lateral medulary stria") AnnotationAssertion(Annotation( "FMA:62469") "lateral medullary lamina") AnnotationAssertion(Annotation( "FMA:62469") "lateral medullary lamina of corpus striatum") AnnotationAssertion(Annotation( "FMA:62469") "lateral medullary lamina of globus pallidus") AnnotationAssertion(Annotation( "FMA:62469") "lateral medullary lamina of pallidum") AnnotationAssertion(Annotation( "FMA:62469") "lateral medullary stria") AnnotationAssertion(Annotation( "BIRNLEX:1634") "medulary lamina of pallidum") AnnotationAssertion(Annotation( "BIRNLEX:1634") "outer medulary lamina") AnnotationAssertion(Annotation( "FMA:62469") "outer medullary lamina") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:234") Annotation( ) "globus pallidus, lamina medullaris externa") AnnotationAssertion(Annotation( "NeuroNames:234") Annotation( ) "lamella pallidi externa") AnnotationAssertion(Annotation( "NeuroNames:234") Annotation( ) "lamina medullaris externa pallidi") AnnotationAssertion(Annotation( "NeuroNames:234") Annotation( ) "lamina medullaris lateralis") AnnotationAssertion(Annotation( "NeuroNames:234") Annotation( ) "lamina pallidi externa") AnnotationAssertion(Annotation( "BAMS:lml") "lateral medullary lamina of the globus pallidus") AnnotationAssertion( "UBERON:0002765") AnnotationAssertion(rdfs:label "lateral medullary lamina of globus pallidus") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf(Annotation( "FMA"^^xsd:string) Annotation( "NIFSTD"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (fusiform gyrus) AnnotationAssertion(Annotation( ) "The fusiform gyrus is part of the temporal lobe. It is also known as the (discontinuous) occipitotemporal gyrus. Other sources have the fusiform gyrus above the occipitotemporal gyrus and underneath the parahippocampal gyrus. [WP,unvetted].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:FuG") AnnotationAssertion( "BAMS:LOTG") AnnotationAssertion( "BAMS:OTG") AnnotationAssertion( "BIRNLEX:1641") AnnotationAssertion( "FMA:61908") AnnotationAssertion( "HBA:4156") AnnotationAssertion( "NCIT:C33197") AnnotationAssertion(Annotation( "BIRNLEX:1641") "UMLS:C0152313") AnnotationAssertion(Annotation( "BIRNLEX:1641") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=139") AnnotationAssertion(Annotation( "FMA:61908") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "gyrus occipitotemporalis lateralis") AnnotationAssertion(Annotation( "FMA:61908") "lateral occipitotemporal gyrus") AnnotationAssertion( "medial occipitotemporal gyrus-1 (heimer)") AnnotationAssertion(Annotation( "FMA:61908") "occipitotemporal gyrus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "gyrus fusiformis") AnnotationAssertion(Annotation( "NeuroNames:139") Annotation( ) "gyrus occipito-temporalis lateralis") AnnotationAssertion(Annotation( "NeuroNames:139") "lateral occipito-temporal gyrus") AnnotationAssertion(Annotation( "BAMS:OTG") "occipito-temporal gyrus") AnnotationAssertion(Annotation( "NeuroNames:139") "t4") AnnotationAssertion( "UBERON:0002766") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "fusiform gyrus") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/f/fe/Gray727.svg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses(Annotation( "lexical"^^xsd:string) ) # Class: (inferior rostral sulcus) AnnotationAssertion(Annotation( "BIRNLEX:1642") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "IROS") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:iros") AnnotationAssertion( "BIRNLEX:1642") AnnotationAssertion( "DHBA:146034844") AnnotationAssertion( "FMA:83767") AnnotationAssertion( "HBA:9367") AnnotationAssertion(Annotation( "BIRNLEX:1642") "UMLS:C0694584") AnnotationAssertion(Annotation( "BIRNLEX:1642") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=75") AnnotationAssertion(Annotation( "BIRNLEX:1642") "sulcus rostralis inferior") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002767") AnnotationAssertion(rdfs:label "inferior rostral sulcus") SubClassOf( ) # Class: (vestibulospinal tract) AnnotationAssertion(Annotation( "GO:0021962") "A long process of a CNS neuron, that carries efferent (outgoing) action potentials from the cell body in the vestibular nucleus of the pons towards target cells in the spinal cord[GO].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:vs") AnnotationAssertion( "BIRNLEX:1643") AnnotationAssertion( "FMA:72646") AnnotationAssertion( "MBA:941") AnnotationAssertion( "TAO:0000709") AnnotationAssertion(Annotation( "BIRNLEX:1643") "UMLS:C0152404") AnnotationAssertion( "ZFA:0000709") AnnotationAssertion(Annotation( "BIRNLEX:1643") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=812") AnnotationAssertion(Annotation( "ZFA:0000709") "vestibulo-spinal tract") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "tractus vestibulospinalis") AnnotationAssertion(Annotation( "ZFA:0000709") Annotation( ) "vestibulo-spinal tracts") AnnotationAssertion(Annotation( "NeuroNames:812") "vestibulospinal pathway") AnnotationAssertion(Annotation( "NeuroNames:812") "vestibulospinal tracts") AnnotationAssertion( "UBERON:0002768") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "vestibulospinal tract") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/b/b2/Spinal_cord_tracts_-_English.svg"^^xsd:anyURI) AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/f/fe/Medulla_spinalis_-_tracts_-_English.svg"^^xsd:anyURI) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf(Annotation( "weakened") Annotation( "NIFSTD"^^xsd:string) ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) SubClassOf(Annotation( "weakened") Annotation( "NIFSTD"^^xsd:string) ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) # Class: (superior temporal gyrus) AnnotationAssertion(Annotation( "BIRNLEX:1648") "Component of the temporal lobe, lateral aspect. The rostral boundary is the rostral extent of the ssuperior temporal sulcus. The caudal boundary is the cauday portion of the superior temporal gyrus (posterior to becoming continuous with the supramarginal gyrus). The medial boundary is the lateral fissure (and when present the supramarginal gyrus), and the lateral boundary is the superior temporal suclus (Christine Fennema-Notestine).") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:STG") AnnotationAssertion( "BIRNLEX:1648") AnnotationAssertion( "BM:Tel-STG") AnnotationAssertion( "DHBA:12140") AnnotationAssertion( "EFO:0001944") AnnotationAssertion( "FMA:61905") AnnotationAssertion( "HBA:4133") AnnotationAssertion( "NCIT:C33698") AnnotationAssertion(Annotation( "BIRNLEX:1648") "UMLS:C0152309") AnnotationAssertion(Annotation( "BIRNLEX:1648") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=136") AnnotationAssertion( "ncithesaurus:Superior_Temporal_Gyrus") AnnotationAssertion(Annotation( "BIRNLEX:1648") "gyrus temporalis superior") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "gyrus temporalis superior") AnnotationAssertion( "UBERON:0002769") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "superior temporal gyrus") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/1/1d/Superior_temporal_gyrus.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (posterior hypothalamic region) AnnotationAssertion(Annotation( "MESH:A08.186.211.730.385.357.362") "The part of the hypothalamus posterior to the middle region consisting of several nuclei including the medial mamillary nucleus, lateral mamillary nucleus, and posterior hypothalamic nucleus (posterior hypothalamic area). The posterior hypothalamic area is concerned with control of sympathetic responses and is sensitive to conditions of decreasing temperature and controls the mechanisms for the conservation and increased production of heat.") AnnotationAssertion(Annotation( "BIRNLEX:1651") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "PHR") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:PH") AnnotationAssertion( "BAMS:PHR") AnnotationAssertion( "BIRNLEX:1651") AnnotationAssertion( "FMA:62029") AnnotationAssertion( "GAID:651") AnnotationAssertion( "HBA:4665") AnnotationAssertion( "MESH:A08.186.211.730.385.357.362") AnnotationAssertion(Annotation( "BIRNLEX:1651") "UMLS:C0020670") AnnotationAssertion(Annotation( "BIRNLEX:1651") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=411") AnnotationAssertion(Annotation( "FMA:62029") "mammillary level of hypothalamus") AnnotationAssertion(Annotation( "FMA:62029") "mammillary region") AnnotationAssertion(Annotation( "FMA:62029") "posterior hypothalamus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:411") Annotation( ) "hypothalamus posterior") AnnotationAssertion(Annotation( "NeuroNames:411") Annotation( ) "regio hypothalamica posterior") AnnotationAssertion( "UBERON:0002770") AnnotationAssertion(rdfs:label "posterior hypothalamic region") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (middle temporal gyrus) AnnotationAssertion(Annotation( "BIRNLEX:1653") "Component of the temporal lobe, lateral aspect. The rostral boundary is the rostral extent of the superior temporal sulcus whereas the caudal boundary is the temporo-occipital incisure on the cortical surface. The superior temporal sulcus is the medial boundary and the inferior temporal sulcus is the lateral boundary (Christine Fennema-Notestine).") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:MTG") AnnotationAssertion( "BIRNLEX:1653") AnnotationAssertion( "DHBA:12141") AnnotationAssertion( "EFO:0002466") AnnotationAssertion( "FMA:61906") AnnotationAssertion( "HBA:4140") AnnotationAssertion( "NCIT:C33125") AnnotationAssertion(Annotation( "BIRNLEX:1653") "UMLS:C0152310") AnnotationAssertion(Annotation( "BIRNLEX:1653") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=137") AnnotationAssertion( "ncithesaurus:Middle_Temporal_Gyrus") AnnotationAssertion(Annotation( "BIRNLEX:1653") "gyrus temporalis medius") AnnotationAssertion(Annotation( "FMA:61906") "intermediate temporal gyrus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:137") "inferior temporal gyrus (Seltzer)") AnnotationAssertion(Annotation( ) "medial temporal gyrus") AnnotationAssertion(Annotation( "BAMS:MTG") "middle (medial) temporal gyrus") AnnotationAssertion( "UBERON:0002771") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "middle temporal gyrus") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/4/49/WOROI_60_loc.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (olfactory sulcus) AnnotationAssertion(Annotation( ) "The medial orbital gyrus presents a well-marked antero-posterior sulcus, the olfactory sulcus, for the olfactory tract. [WP,unvetted].") AnnotationAssertion(Annotation( "BIRNLEX:1655") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "OLFS") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:olfs") AnnotationAssertion( "BIRNLEX:1655") AnnotationAssertion( "BM:Tel-Cx-OFS") AnnotationAssertion( "DHBA:10624") AnnotationAssertion( "FMA:83769") AnnotationAssertion( "HBA:9361") AnnotationAssertion( "NCIT:C33206") AnnotationAssertion(Annotation( "BIRNLEX:1655") "UMLS:C0228205") AnnotationAssertion(Annotation( "ncithesaurus:Olfactory_Sulcus") "UMLS:C0228205") AnnotationAssertion(Annotation( "BIRNLEX:1655") "UMLS:C1281082") AnnotationAssertion(Annotation( "BIRNLEX:1655") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=78") AnnotationAssertion(Annotation( "BIRNLEX:1655") "olfactory groove") AnnotationAssertion(Annotation( "BIRNLEX:1655") "sulcus olfactorius") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "sulcus olfactorius lobi frontalis") AnnotationAssertion( "UBERON:0002772") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "olfactory sulcus") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/9/9a/Gray729_olfactory_sulcus.png"^^xsd:anyURI) SubClassOf( ) # Class: (anterior transverse temporal gyrus) AnnotationAssertion(Annotation( ) "The transverse temporal gyri (also called Heschl's gyri or Heschl's convolutions) are found in the area of primary auditory cortex in the superior temporal gyrus of the human brain, occupying Brodmann areas 41 and 42. It is the first cortical structure to process incoming auditory information. Anatomically, the transverse temporal gyri are distinct in that they run mediolaterally (towards the center of the brain) rather than dorsiventrally (front to back) as all other temporal lobe gyri run. The Heschl's gyri are named after Richard L. Heschl.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:ATTG") AnnotationAssertion( "BIRNLEX:1657") AnnotationAssertion( "FMA:61909") AnnotationAssertion( "FMA:71029") AnnotationAssertion( "HBA:4165") AnnotationAssertion(Annotation( "BIRNLEX:1657") "UMLS:C0262198") AnnotationAssertion(Annotation( "BIRNLEX:1657") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=134") AnnotationAssertion(Annotation( "BIRNLEX:1657") "anterior transverse convolution of heschl") AnnotationAssertion( "anterior transverse temporal convolution of heschl") AnnotationAssertion( "first transverse gyrus of Heschl") AnnotationAssertion( "great transverse gyrus of Heschl") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:134") Annotation( ) "gyrus temporalis transversus anterior") AnnotationAssertion(Annotation( "NeuroNames:134") Annotation( ) "gyrus temporalis transversus primus") AnnotationAssertion( "UBERON:0002773") AnnotationAssertion(rdfs:label "anterior transverse temporal gyrus") SubClassOf( ) DisjointClasses(Annotation( "lexical"^^xsd:string) ) # Class: (posterior transverse temporal gyrus) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:PTTG") AnnotationAssertion( "BIRNLEX:1661") AnnotationAssertion( "FMA:61910") AnnotationAssertion(Annotation( "BIRNLEX:1661") "UMLS:C0262320") AnnotationAssertion(Annotation( "BIRNLEX:1661") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=135") AnnotationAssertion(Annotation( "BIRNLEX:1661") "posterior transverse convolution of heschl") AnnotationAssertion( "posterior transverse temporal convolution of heschl") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:135") Annotation( ) "gyrus temporalis transversus posterior") AnnotationAssertion( "UBERON:0002774") AnnotationAssertion(rdfs:label "posterior transverse temporal gyrus") SubClassOf( ) # Class: (olivocochlear bundle) AnnotationAssertion(Annotation( "ISBN:0471888893"^^xsd:string) "A pathway that terminates on the hair cells of the cochlea or equivalent organ in the inner ear.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:ocb") AnnotationAssertion( "BIRNLEX:1666") AnnotationAssertion( "DHBA:12771") AnnotationAssertion( "FMA:72485") AnnotationAssertion(Annotation( "BIRNLEX:1666") "UMLS:C0228447") AnnotationAssertion(Annotation( "BIRNLEX:1666") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=577") AnnotationAssertion( "bundle of Rasmussen") AnnotationAssertion(Annotation( "FMA:72485") "efferent cochlear bundle") AnnotationAssertion(Annotation( "FMA:72485") "efferent cochlear pathway") AnnotationAssertion(Annotation( "ISBN:0471888893"^^xsd:string) "olivocochlear bundle of rasmussen") AnnotationAssertion(Annotation( "FMA:72485") "olivocochlear tract") AnnotationAssertion(Annotation( "FMA:72485") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "tractus olivocochlearis") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002775") AnnotationAssertion(rdfs:label "olivocochlear bundle") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (ventral nuclear group) AnnotationAssertion(Annotation( "ISBN:0471888893"^^xsd:string) "Nuclei in the ventral part of the thalamus, involved in modulating activity of dorsal thalamic nuclei.") AnnotationAssertion(Annotation( ) "The ventral nuclear group is a collection of nuclei on the ventral side of the thalamus. According to MeSH, it consists of the following: ventral anterior nucleus ventral lateral nucleus ventral posterior nucleus [WP,unvetted][Wikipedia:Ventral_nuclear_group].") AnnotationAssertion(Annotation( "FMA"^^xsd:string) "consider splitting nucleus from nuclear group (FMA has 'nucleus of subthalamus') - but note this is also treated as a nucleus (singular) in FMA. ZFA:0005576 represents an individual nucleus within the group") AnnotationAssertion(Annotation( "BIRNLEX:1669") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "VNG") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:VENT") AnnotationAssertion( "BAMS:VNG") AnnotationAssertion( "BIRNLEX:1669") AnnotationAssertion( "BTO:0002467") AnnotationAssertion( "DMBA:16423") AnnotationAssertion( "EV:0100206") AnnotationAssertion( "FMA:62022") AnnotationAssertion( "MBA:637") AnnotationAssertion(Annotation( "BIRNLEX:1669") "UMLS:C0228333") AnnotationAssertion( "ZFA:0005576") AnnotationAssertion(Annotation( "BIRNLEX:1669") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=333") AnnotationAssertion(Annotation( ) "dorsal thalamus, ventral group") AnnotationAssertion(Annotation( "BIRNLEX:1669") "nuclei ventrales thalami") AnnotationAssertion(Annotation( "BIRNLEX:1669") "ventral group of dorsal thalamus") AnnotationAssertion(Annotation( "FMA:62022") "ventral nuclear group") AnnotationAssertion(Annotation( "FMA:62022") "ventral nuclear group of thalamus") AnnotationAssertion(Annotation( "FMA:62022") "ventral nuclear mass") AnnotationAssertion(Annotation( "FMA:62022") "ventral nuclei of thalamus") AnnotationAssertion(Annotation( "FMA:62022") "ventral tier thalamic nuclei") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BAMS:VENT") "ventral dorsal thalamic nuclear group") AnnotationAssertion(Annotation( "BAMS:VENT") "ventral group of the dorsal thalamus") AnnotationAssertion(Annotation( "ZFA:0005576") "ventral thalamus nucleus") AnnotationAssertion( "UBERON:0002776") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "ventral nuclear group") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/1/1b/ThalamicNuclei.png"^^xsd:anyURI) SubClassOf( ) # Class: (obsolete neostriatum) AnnotationAssertion( "BIRNLEX:1672") AnnotationAssertion( "FMA:77617") AnnotationAssertion( "GAID:669") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002777") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "obsolete neostriatum") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (ventral pallidum) AnnotationAssertion(Annotation( "BIRNLEX:1674") "Part of the globus pallidus, consisting of the more medial of the two segments. In some species, e.g., primates, it is separated from the lateral segment by the fibers of the medial medullary lamina (MM).") AnnotationAssertion( ) AnnotationAssertion( "BAMS:PALv") AnnotationAssertion( "BIRNLEX:1674") AnnotationAssertion( "BM:Tel-VPa") AnnotationAssertion( "BTO:0004375") AnnotationAssertion( "DHBA:10345") AnnotationAssertion( "DMBA:15844") AnnotationAssertion( "FMA:77613") AnnotationAssertion( "MBA:835") AnnotationAssertion(Annotation( "BIRNLEX:1674") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=794") AnnotationAssertion(Annotation( ) "globus pallidus ventral part") AnnotationAssertion(Annotation( "BIRNLEX:1674") "ventral pallidum") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:794") Annotation( ) "fibrae nervi vagi") AnnotationAssertion(Annotation( "BAMS:PALv") "pallidum ventral region") AnnotationAssertion(Annotation( "BTO:0004375") "ventral globus pallidus") AnnotationAssertion( "UBERON:0002778") AnnotationAssertion(rdfs:label "ventral pallidum") SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf(Annotation( "BTO"^^xsd:string) Annotation( "NIF-def") ObjectSomeValuesFrom( )) SubClassOf(Annotation( "NIFSTD"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (lateral superior olivary nucleus) AnnotationAssertion(Annotation( "BIRNLEX:1675") "One of two recognized nuclei comprising the superior olive. The lateral superior olivary nucleus is much less prominent in humans than in many rodents and carnivores. In the latter species, it is frequently described as S- or V-shaped.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:IOda") AnnotationAssertion( "BAMS:LSO") AnnotationAssertion( "BIRNLEX:1675") AnnotationAssertion( "BM:Pons-SOL") AnnotationAssertion( "DHBA:12469") AnnotationAssertion( "DMBA:17261") AnnotationAssertion( "FMA:72472") AnnotationAssertion( "HBA:9183") AnnotationAssertion( "MBA:114") AnnotationAssertion(Annotation( "BIRNLEX:1675") "UMLS:C0175429") AnnotationAssertion(Annotation( "BIRNLEX:1675") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=571") AnnotationAssertion(Annotation( ) "LSON") AnnotationAssertion(Annotation( "FMA:72472") "accessory olivary nucleus") AnnotationAssertion(Annotation( "FMA:72472") "accessory superior olivary nucleus") AnnotationAssertion(Annotation( "FMA:72472") "accessory superior olive") AnnotationAssertion(Annotation( "FMA:72472") "lateral superior olive") AnnotationAssertion(Annotation( "FMA:72472") "superior olivary nucleus, lateral part") AnnotationAssertion( "superior olive lateral part") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BAMS:IOda") "inferior olivary complex dorsalaccessory nucleus") AnnotationAssertion(Annotation( "NeuroNames:571") Annotation( ) "nucleus olivaris superior lateralis") AnnotationAssertion(Annotation( "NeuroNames:571") "superior olivary complex, lateral part") AnnotationAssertion( "UBERON:0002779") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "lateral superior olivary nucleus") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/9/9a/Gray679.png"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "NIFSTD"^^xsd:string) ObjectSomeValuesFrom( )) DisjointClasses(Annotation( "lexical"^^xsd:string) ) # Class: (obsolete regional part of forebrain) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A regional part of brain that is part of a forebrain [Automatically generated definition].") AnnotationAssertion( "BIRNLEX:1677") AnnotationAssertion( "FMA:61996") AnnotationAssertion(Annotation( "FMA:61996") "forebrain segment") AnnotationAssertion(Annotation( "BIRNLEX:1677") "segment of forebrain") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002780") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "obsolete regional part of forebrain") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (caudal part of ventral posterolateral nucleus of thalamus) AnnotationAssertion(Annotation( "BIRNLEX:1681") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "VPLC") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:VPLC") AnnotationAssertion( "BAMS:VPLp") AnnotationAssertion( "BIRNLEX:1681") AnnotationAssertion( "DHBA:266441515") AnnotationAssertion( "FMA:62206") AnnotationAssertion(Annotation( "BIRNLEX:1681") "UMLS:C0175287") AnnotationAssertion(Annotation( "BIRNLEX:1681") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=346") AnnotationAssertion(Annotation( "FMA:62206") "caudal part of ventral posterolateral nucleus") AnnotationAssertion( "ventral posterior lateral nucleus (ilinsky)") AnnotationAssertion(Annotation( "FMA:62206") "ventral posterolateral nucleus, caudal part") AnnotationAssertion(Annotation( "FMA:62206") "ventral posterolateral thalamic nucleus, caudal part") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:346") "caudal part of the ventral posterolateral nucleus") AnnotationAssertion(Annotation( "NeuroNames:346") Annotation( ) "nucleus ventralis caudalis lateralis") AnnotationAssertion(Annotation( "NeuroNames:346") Annotation( ) "nucleus ventralis posterior lateralis, pars caudalis") AnnotationAssertion(Annotation( "NeuroNames:346") Annotation( ) "nucleus ventralis posterior pars lateralis (Dewulf)") AnnotationAssertion(Annotation( "NeuroNames:346") Annotation( ) "nucleus ventralis posterolateralis (Walker)") AnnotationAssertion(Annotation( "NeuroNames:346") Annotation( ) "nucleus ventrocaudalis externus (Van Buren)") AnnotationAssertion(Annotation( "BAMS:VPLp") "ventral posterolateral thalamic nucleus, posterior part") AnnotationAssertion( "UBERON:0002781") AnnotationAssertion(rdfs:label "caudal part of ventral posterolateral nucleus of thalamus") SubClassOf( ) SubClassOf(Annotation( "NIFSTD"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (medial superior olivary nucleus) AnnotationAssertion(Annotation( "BIRNLEX:1682") "One of two subnuclei of the superior olive located within the caudal pontine tegmentum. Appears as a parasagittal row of transversely oriented bipolar neurons in transverse sections of human, with elongated somata in humans and other primates and large caliber dendrites.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:MSO") AnnotationAssertion( "BIRNLEX:1682") AnnotationAssertion( "BM:Pons-SOM") AnnotationAssertion( "DHBA:12470") AnnotationAssertion( "DMBA:17262") AnnotationAssertion( "FMA:226223") AnnotationAssertion( "FMA:72473") AnnotationAssertion( "HBA:9184") AnnotationAssertion( "MBA:105") AnnotationAssertion(Annotation( "BIRNLEX:1682") "UMLS:C0175430") AnnotationAssertion(Annotation( "BIRNLEX:1682") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=572") AnnotationAssertion(Annotation( "FMA:72473") "chief nucleus of superior olive") AnnotationAssertion(Annotation( "FMA:72473") "chief superior olivary nucleus") AnnotationAssertion(Annotation( "FMA:72473") "main superior olivary nucleus") AnnotationAssertion(Annotation( "FMA:72473") "medial superior olive") AnnotationAssertion(Annotation( "FMA:72473") "principal superior olivary nucleus") AnnotationAssertion(Annotation( "FMA:72473") "superior olivary nucleus, medial part") AnnotationAssertion( "superior olive medial part") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BIRNLEX:1682") Annotation( ) "MSO") AnnotationAssertion(Annotation( "BIRNLEX:1682") "nucleus laminaris") AnnotationAssertion(Annotation( "NeuroNames:572") Annotation( ) "nucleus olivaris superior medialis") AnnotationAssertion(Annotation( "NeuroNames:572") "superior olivary complex, medial part") AnnotationAssertion(Annotation( "NeuroNames:572") "superior paraolivary nucleus") AnnotationAssertion(Annotation( "NeuroNames:572") "superior parolivary nucleus") AnnotationAssertion( "UBERON:0002782") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "medial superior olivary nucleus") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/4/46/Gray713.png"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "NIFSTD"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (central tegmental tract of pons) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:ctgp") AnnotationAssertion( "BIRNLEX:1683") AnnotationAssertion( "FMA:72494") AnnotationAssertion(Annotation( "BIRNLEX:1683") "UMLS:C0228443") AnnotationAssertion(Annotation( "BIRNLEX:1683") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=601") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:601") "central tegmental tract of the pons") AnnotationAssertion(Annotation( "NeuroNames:601") Annotation( ) "tractus tegmentalis centralis (pontis)") AnnotationAssertion( "UBERON:0002783") AnnotationAssertion(rdfs:label "central tegmental tract of pons") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete regional part of diencephalon) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A regional part of brain that is part of a diencephalon [Automatically generated definition].") AnnotationAssertion( "BIRNLEX:1685") AnnotationAssertion( "FMA:62005") AnnotationAssertion( "SCTID:119264001") AnnotationAssertion(Annotation( "FMA:62005") "diencephalon segment") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002784") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "obsolete regional part of diencephalon") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete regional part of lateral hypothalamic region) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A multi-tissue structure that is part of a lateral hypothalamic area.") AnnotationAssertion( "BIRNLEX:1687") AnnotationAssertion( "FMA:62312") AnnotationAssertion(Annotation( "FMA:62312") "lateral hypothalamic region segment") AnnotationAssertion(Annotation( "BIRNLEX:1687") "segment of lateral hypothalamic region") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002785") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "obsolete regional part of lateral hypothalamic region") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (root of abducens nerve) AnnotationAssertion(Annotation( "BIRNLEX:1689") "Nerve fibers arising from motor neurons in the abducens nucleus that are contained within the pontine tegmentum.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:6n") AnnotationAssertion( "BAMS:6nf") AnnotationAssertion( "BIRNLEX:1277") AnnotationAssertion( "BIRNLEX:1689") AnnotationAssertion( "DHBA:12861") AnnotationAssertion( "DMBA:17741") AnnotationAssertion( "FMA:72491") AnnotationAssertion(Annotation( "BIRNLEX:1689") "UMLS:C0175450") AnnotationAssertion(Annotation( "BIRNLEX:1689") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=598") AnnotationAssertion(Annotation( "FMA:72491") "abducens nerve fibers") AnnotationAssertion(Annotation( "FMA:72491") "abducens nerve tract") AnnotationAssertion(Annotation( "FMA:72491") "central part of abducens nerve") AnnotationAssertion(Annotation( "FMA:72491") "root of abducens nerve") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BIRNLEX:1277") "abducens nerve root") AnnotationAssertion(Annotation( "BAMS:6n") "abducens nerve/root") AnnotationAssertion(Annotation( "NeuroNames:598") Annotation( ) "fibrae nervi abducentis") AnnotationAssertion( "UBERON:0002786") AnnotationAssertion(rdfs:label "root of abducens nerve") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf(Annotation( "ZFA-abduced") ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (decussation of trochlear nerve) AnnotationAssertion(Annotation( ) "The crossing of the two trochlear nerves at their exit through the velum medullare anterius.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:4x") AnnotationAssertion( "BAMS:IVd") AnnotationAssertion( "BIRNLEX:1690") AnnotationAssertion( "DHBA:12338") AnnotationAssertion( "FMA:72488") AnnotationAssertion( "MBA:384") AnnotationAssertion(Annotation( "BIRNLEX:1690") "UMLS:C0175448") AnnotationAssertion(Annotation( "BIRNLEX:1690") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=595") AnnotationAssertion(Annotation( ) Annotation( ) "decussatio fibrarum nervorum trochlearium") AnnotationAssertion(Annotation( "FMA:72488") "decussation of trochlear nerve (IV)") AnnotationAssertion(Annotation( "DHBA:12338") "decussation of trochlear nerve fibers") AnnotationAssertion(Annotation( "FMA:72488") "trochlear neural decussation") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:595") Annotation( ) "decussatio nervorum trochlearium") AnnotationAssertion(Annotation( "NeuroNames:595") Annotation( ) "decussatio trochlearis") AnnotationAssertion(Annotation( "NeuroNames:595") "decussation of the trochlear nerve") AnnotationAssertion(Annotation( "BAMS:4x") "trochlear decussation") AnnotationAssertion(Annotation( "NeuroNames:595") "trochlear nerve decussation") AnnotationAssertion( "UBERON:0002787") AnnotationAssertion(rdfs:label "decussation of trochlear nerve") SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (anterior nuclear group) AnnotationAssertion(Annotation( "BIRNLEX:1692") "Mostly gray regional part of anterior thalamic region, consisting of the anterior medial, anterior dorsal and anterior lateral thalamic nuclei in primates. In rodents, it consists of anterior medial and anterior ventral divisions, with several subdivisions of each, according to Paxinos (MM: 2006-10-26).") AnnotationAssertion(Annotation( "BIRNLEX:1692") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "ANG") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:ANG") AnnotationAssertion( "BAMS:ATN") AnnotationAssertion( "BAMS:ATh") AnnotationAssertion( "BAMS:asan") AnnotationAssertion( "BIRNLEX:1692") AnnotationAssertion( "DHBA:10392") AnnotationAssertion( "EMAPA:35132") AnnotationAssertion( "EV:0100196") AnnotationAssertion( "FMA:62019") AnnotationAssertion( "GAID:658") AnnotationAssertion( "MA:0000861") AnnotationAssertion( "MBA:239") AnnotationAssertion( "MESH:A08.186.211.730.385.826.701.080") AnnotationAssertion( "TAO:0000427") AnnotationAssertion(Annotation( "BIRNLEX:1692") "UMLS:C0228316") AnnotationAssertion( "ZFA:0000427") AnnotationAssertion(Annotation( "BIRNLEX:1692") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=302") AnnotationAssertion(Annotation( "FMA:62019") "anterior nuclear group") AnnotationAssertion(Annotation( "FMA:62019") "anterior nuclear group of thalamus") AnnotationAssertion(Annotation( "FMA:62019") "anterior nuclei of thalamus") AnnotationAssertion(Annotation( "FMA:62019") "anterior nucleus of thalamus") AnnotationAssertion(Annotation( "MA:0000861") "anterior thalamic group") AnnotationAssertion(Annotation( "FMA:62019") "anterior thalamic nuclei") AnnotationAssertion(Annotation( "BIRNLEX:1692") "anterior thalamus") AnnotationAssertion(Annotation( "BIRNLEX:1692") "nuclei anterior thalami") AnnotationAssertion(Annotation( "BIRNLEX:1692") "nuclei anteriores (thalami)") AnnotationAssertion(Annotation( "BIRNLEX:1692") "nuclei anteriores thalami") AnnotationAssertion(Annotation( "BIRNLEX:1692") "nuclei thalamicus anterior") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BAMS:ATN") "anterior group of thalamus") AnnotationAssertion(Annotation( "BAMS:ATN") "anterior group of the dorsal thalamus") AnnotationAssertion(Annotation( "NeuroNames:302") "anterior nuclear group of the thalamus") AnnotationAssertion(Annotation( "BAMS:ATN") "anterior thalamic nuclear group") AnnotationAssertion(Annotation( "NeuroNames:302") "anterior thalamic nucleus") AnnotationAssertion(Annotation( "BAMS:ATN") "dorsal thalamus anterior division") AnnotationAssertion(Annotation( "NeuroNames:302") Annotation( ) "nucleus anterior thalami") AnnotationAssertion(Annotation( "NeuroNames:302") Annotation( ) "nucleus thalamicus anterior") AnnotationAssertion(Annotation( "TAO:0000427") "rostral thalamic nucleus") AnnotationAssertion( "UBERON:0002788") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "anterior nuclear group") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/1/1b/ThalamicNuclei.png"^^xsd:anyURI) SubClassOf( ) DisjointClasses(Annotation( "lexical"^^xsd:string) ) # Class: (obsolete regional part of posterior hypothalamic region) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A regional part of brain that is part of a posterior hypothalamic region [Automatically generated definition].") AnnotationAssertion( "BIRNLEX:1697") AnnotationAssertion( "FMA:62311") AnnotationAssertion(Annotation( "FMA:62311") "posterior hypothalamic region segment") AnnotationAssertion(Annotation( "BIRNLEX:1697") "segment of posterior hypothalamic region") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002789") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "obsolete regional part of posterior hypothalamic region") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (dorsal acoustic stria) AnnotationAssertion(Annotation( "BIRNLEX:1698") "White matter structure containing fibers arising from the cochlear nuclear complex.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:das") AnnotationAssertion( "BIRNLEX:1698") AnnotationAssertion( "DHBA:12733") AnnotationAssertion( "FMA:72496") AnnotationAssertion( "MBA:506") AnnotationAssertion(Annotation( "BIRNLEX:1698") "UMLS:C0175454") AnnotationAssertion(Annotation( "BIRNLEX:1698") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=602") AnnotationAssertion(Annotation( "FMA:72496") "posterior acoustic stria") AnnotationAssertion(Annotation( "FMA:72496") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "stria cochlearis posterior") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:602") "dorsal acoustic stria (Monakow)") AnnotationAssertion(Annotation( "NeuroNames:602") Annotation( ) "striae acusticae dorsalis") AnnotationAssertion( "UBERON:0002790") AnnotationAssertion(rdfs:label "dorsal acoustic stria") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ) DisjointClasses(Annotation( "lexical"^^xsd:string) ) # Class: (obsolete regional part of telencephalon) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A regional part of brain that is part of a telencephalon [Automatically generated definition].") AnnotationAssertion( "BIRNLEX:1700") AnnotationAssertion( "FMA:62374") AnnotationAssertion(Annotation( "BIRNLEX:1700") "segment of telencephalon") AnnotationAssertion(Annotation( "FMA:62374") "telencephalon segment") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002791") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "obsolete regional part of telencephalon") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (lumbar spinal cord) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:1704") AnnotationAssertion( "FMA:71168") AnnotationAssertion( "MA:0003083") AnnotationAssertion( "NCIT:C12895") AnnotationAssertion(Annotation( "BIRNLEX:1704") "UMLS:C0581620") AnnotationAssertion(Annotation( "ncithesaurus:Lumbar_Spinal_Cord") "UMLS:C0581621") AnnotationAssertion(Annotation( "BIRNLEX:1704") "UMLS:C1278838") AnnotationAssertion(Annotation( "FMA:71168") "lumbar segment of spinal cord") AnnotationAssertion(Annotation( "FMA:71168") "lumbar segments of spinal cord [1-5]") AnnotationAssertion(Annotation( "FMA:71168") "lumbar spinal cord") AnnotationAssertion(Annotation( "FMA:71168") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "pars lumbalis medullae spinalis") AnnotationAssertion(Annotation( "FMA:71168") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "segmenta lumbalia medullae spinalis [1-5]") AnnotationAssertion(Annotation( "MA:0003083") "spinal cord lumbar segment") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002792") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "lumbar spinal cord") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (dorsal longitudinal fasciculus of pons) AnnotationAssertion(Annotation( "BIRNLEX:1707") "Part of dorsal longitudinal fasciculus located within the pons.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:dlfp") AnnotationAssertion( "BIRNLEX:1707") AnnotationAssertion( "FMA:72492") AnnotationAssertion(Annotation( "BIRNLEX:1707") "UMLS:C0262223") AnnotationAssertion(Annotation( "BIRNLEX:1707") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=599") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:599") "dorsal longitudinal fasciculus of the pons") AnnotationAssertion(Annotation( "NeuroNames:599") Annotation( ) "fasciculus longitudinalis dorsalis (pontis)") AnnotationAssertion( "UBERON:0002793") AnnotationAssertion(rdfs:label "dorsal longitudinal fasciculus of pons") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "NIFSTD"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (medial longitudinal fasciculus of pons) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A medial longitudinal fasciculus that is part of a pons [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:mlfp") AnnotationAssertion( "BIRNLEX:1708") AnnotationAssertion( "FMA:72493") AnnotationAssertion(Annotation( "BIRNLEX:1708") "UMLS:C0228440") AnnotationAssertion(Annotation( "BIRNLEX:1708") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=600") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "medial longitudinal fasciculus of pons of varolius") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "pons medial longitudinal fasciculus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "pons of varolius medial longitudinal fasciculus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:600") Annotation( ) "fasciculus longitudinalis medialis (pontis)") AnnotationAssertion(Annotation( "NeuroNames:600") "medial longitudinal fasciculus of the pons") AnnotationAssertion( "UBERON:0002794") AnnotationAssertion(rdfs:label "medial longitudinal fasciculus of pons") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (frontal pole) AnnotationAssertion(Annotation( "BIRNLEX:1716") "Component of the frontal lobe. The rostral and caudal boundaries of the frontal pole are the superior frontal gyrus and the rostral division of the middle frontal gyrus respectively (Christine Fennama-Notestine).") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:FRP") AnnotationAssertion( "BAMS:FrP") AnnotationAssertion( "BAMS:frp") AnnotationAssertion( "BIRNLEX:1716") AnnotationAssertion( "DHBA:146034888") AnnotationAssertion( "FMA:74885") AnnotationAssertion( "HBA:4888") AnnotationAssertion( "MBA:184") AnnotationAssertion(Annotation( "BIRNLEX:1716") "UMLS:C0149546") AnnotationAssertion(Annotation( "BIRNLEX:1716") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=57") AnnotationAssertion(Annotation( "FMA:74885") "frontal pole") AnnotationAssertion(Annotation( "NeuroNames:57") Annotation( ) "polus frontalis") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BAMS:FRP") "frontal pole, cerebral cortex") AnnotationAssertion( "UBERON:0002795") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "frontal pole") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/e/e3/Human_brain_lateral_view_description.JPG"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (motor root of trigeminal nerve) AnnotationAssertion( "TODO - check ZFA") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:m5") AnnotationAssertion( "BAMS:mV") AnnotationAssertion( "BAMS:mo5") AnnotationAssertion( "BAMS:moV") AnnotationAssertion( "BIRNLEX:1717") AnnotationAssertion( "DHBA:12866") AnnotationAssertion( "FMA:52612") AnnotationAssertion( "MBA:93") AnnotationAssertion( "TAO:0000650") AnnotationAssertion(Annotation( "BIRNLEX:1717") "UMLS:C0228707") AnnotationAssertion( "ZFA:0000650") AnnotationAssertion(Annotation( "BIRNLEX:1717") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=608") AnnotationAssertion(Annotation( "FMA:52612") "motor branch of trigeminal nerve") AnnotationAssertion( "motor root of nervus v") AnnotationAssertion(Annotation( "FMA:52612") "radix motoria (Nervus trigeminus [V])") AnnotationAssertion(Annotation( "FMA:52612") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "radix motoria nervus trigemini") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "TAO:0000650") "dorsal motor root of v") AnnotationAssertion(Annotation( "ZFA:0000650") Annotation( ) "dorsal motor roots of V") AnnotationAssertion(Annotation( "NeuroNames:608") "minor root of trigeminal nerve") AnnotationAssertion(Annotation( "NeuroNames:608") "motor root of N. V") AnnotationAssertion(Annotation( "NeuroNames:608") "motor root of the trigeminal nerve") AnnotationAssertion(Annotation( "NeuroNames:608") Annotation( ) "nervus trigemini radix motoria") AnnotationAssertion(Annotation( "NeuroNames:608") Annotation( ) "nervus trigeminus, radix motoria") AnnotationAssertion(Annotation( "NeuroNames:608") Annotation( ) "nervus trigeminus, radix motorius") AnnotationAssertion(Annotation( "NeuroNames:608") Annotation( ) "portio minor nervi trigemini") AnnotationAssertion(Annotation( "NeuroNames:608") Annotation( ) "portio minor of trigeminal nerve") AnnotationAssertion(Annotation( "NeuroNames:608") Annotation( ) "radix motoria") AnnotationAssertion( "UBERON:0002796") AnnotationAssertion(rdfs:label "motor root of trigeminal nerve") SubClassOf( ) SubClassOf(Annotation( "Wikipedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (dorsal trigeminal tract) AnnotationAssertion(Annotation( ) "The dorsal trigeminal tract (dorsal trigeminothalamic tract, or lemniscus) is a tract which receives signals from Meissner's corpuscles and Pacinian corpuscles. this tract arises from Principal trigeminal nucleus and terminates in the VPM nucleus of the thalamus. [WP,unvetted].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:d5") AnnotationAssertion( "BAMS:tth") AnnotationAssertion( "BIRNLEX:1718") AnnotationAssertion( "DHBA:12736") AnnotationAssertion( "FMA:72500") AnnotationAssertion(Annotation( "BIRNLEX:1718") "UMLS:C0175459") AnnotationAssertion(Annotation( "BIRNLEX:1718") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=606") AnnotationAssertion(Annotation( "FMA:72500") "dorsal ascending trigeminal tract") AnnotationAssertion(Annotation( "FMA:72500") "dorsal division of trigeminal lemniscus") AnnotationAssertion( "dorsal secondary ascending tract of v") AnnotationAssertion( "dorsal secondary tract of v") AnnotationAssertion(Annotation( "FMA:72500") "dorsal trigeminal lemniscus") AnnotationAssertion(Annotation( "FMA:72500") "dorsal trigeminal pathway") AnnotationAssertion(Annotation( "FMA:72500") "dorsal trigeminothalamic tract") AnnotationAssertion(Annotation( "FMA:72500") "posterior trigeminothalamic tract") AnnotationAssertion(Annotation( "FMA:72500") "reticulothalamic tract") AnnotationAssertion(Annotation( "FMA:72500") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "tractus trigeminothalamicus posterior") AnnotationAssertion(Annotation( "FMA:72500") "uncrossed dorsal trigeminothalamic tract") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:606") "dorsal secondary ascending tract of V") AnnotationAssertion(Annotation( "BAMS:tth") "dorsal trigemino-thalamic tract") AnnotationAssertion(Annotation( "NeuroNames:606") "dorsal trigmino-thalamic tract") AnnotationAssertion(Annotation( "NeuroNames:606") Annotation( ) "tractus trigeminalis dorsalis") AnnotationAssertion(Annotation( "NeuroNames:606") Annotation( ) "tractus trigemino-thalamicus dorsalis") AnnotationAssertion( "UBERON:0002797") AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "This tract arises from Principal trigeminal nucleus and terminates in the ipsilateral VPM nucleus of the thalamus.[WP]") AnnotationAssertion(rdfs:label "dorsal trigeminal tract") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) Annotation( "NIFSTD"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (spinothalamic tract of pons) AnnotationAssertion(Annotation( "BIRNLEX:1719") "Part of spinothalamic tract that is in the pontine tegmentum.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:stp") AnnotationAssertion( "BIRNLEX:1719") AnnotationAssertion( "FMA:72504") AnnotationAssertion( "MBA:277") AnnotationAssertion(Annotation( "BIRNLEX:1719") "UMLS:C0152380") AnnotationAssertion(Annotation( "BIRNLEX:1719") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=611") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "pons of varolius spinothalamic tract") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "pons of varolius spinothalamic tract of medulla") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "pons spinothalamic tract") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "pons spinothalamic tract of medulla") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "spinothalamic tract of medulla of pons") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "spinothalamic tract of medulla of pons of varolius") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "spinothalamic tract of pons of varolius") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BAMS:stp") "spinotectal pathway") AnnotationAssertion(Annotation( "NeuroNames:611") "spinothalamic tract of the pons") AnnotationAssertion(Annotation( "NeuroNames:611") Annotation( ) "tractus spinothalamicus (pontis)") AnnotationAssertion( "UBERON:0002798") AnnotationAssertion(rdfs:label "spinothalamic tract of pons") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (fronto-orbital sulcus) AnnotationAssertion(Annotation( "BIRNLEX:1724") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "FROS") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:fros") AnnotationAssertion( "BIRNLEX:1724") AnnotationAssertion( "BM:Tel-Cx-OFS") AnnotationAssertion( "FMA:83768") AnnotationAssertion( "HBA:9362") AnnotationAssertion(Annotation( "BIRNLEX:1724") "UMLS:C0262240") AnnotationAssertion(Annotation( "BIRNLEX:1724") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=77") AnnotationAssertion(Annotation( "FMA:83768") "fronto-orbital dimple") AnnotationAssertion(Annotation( "FMA:83768") "orbito-frontal sulcus") AnnotationAssertion(Annotation( "BM:Tel-Cx-OFS") "orbitofrontal sulcus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:77") Annotation( ) "sulcus fronto-orbitalis") AnnotationAssertion( "UBERON:0002799") AnnotationAssertion(rdfs:label "fronto-orbital sulcus") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (spinal trigeminal tract of pons) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:sp5p") AnnotationAssertion( "BIRNLEX:1725") AnnotationAssertion( "FMA:72507") AnnotationAssertion(Annotation( "BIRNLEX:1725") "UMLS:C0228456") AnnotationAssertion(Annotation( "BIRNLEX:1725") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=614") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:614") "spinal trigeminal tract of the pons") AnnotationAssertion(Annotation( "NeuroNames:614") Annotation( ) "tractus spinalis nervi trigemini (pontis)") AnnotationAssertion( "UBERON:0002800") AnnotationAssertion(rdfs:label "spinal trigeminal tract of pons") SubClassOf( ) SubClassOf(Annotation( "NIFSTD"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (stratum zonale of thalamus) AnnotationAssertion(Annotation( ) "The thalamus consists chiefly of gray substance, but its upper surface is covered by a layer of white substance, named the stratum zonale.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:SZ") AnnotationAssertion( "BIRNLEX:1727") AnnotationAssertion( "DHBA:12085") AnnotationAssertion( "FMA:83905") AnnotationAssertion( "HBA:265505326") AnnotationAssertion(Annotation( "BIRNLEX:1727") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=374") AnnotationAssertion(Annotation( "FMA:83905") "neuraxis stratum") AnnotationAssertion(Annotation( "BIRNLEX:1727") "stratum zonale thalami") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:374") "stratum zonale of the thalamus") AnnotationAssertion( "UBERON:0002801") AnnotationAssertion(rdfs:label "stratum zonale of thalamus") SubClassOf( ) SubClassOf(Annotation( "NIFSTD"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (left parietal lobe) AnnotationAssertion(Annotation( "BIRNLEX:1728") "Parietal lobe of the left hemisphere of the brain.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:1728") AnnotationAssertion( "FMA:72974") AnnotationAssertion(Annotation( "BIRNLEX:1728") "UMLS:C1281960") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002802") AnnotationAssertion(rdfs:label "left parietal lobe") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (right parietal lobe) AnnotationAssertion(Annotation( "BIRNLEX:1729") "Parietal lobe of the right hemisphere of the brain.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:1729") AnnotationAssertion( "FMA:72973") AnnotationAssertion(Annotation( "BIRNLEX:1729") "UMLS:C1281959") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002803") AnnotationAssertion(rdfs:label "right parietal lobe") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (left limbic lobe) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A limbic lobe that is part of a left cerebral hemisphere.") AnnotationAssertion( "BIRNLEX:1780") AnnotationAssertion( "FMA:72981") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002804") AnnotationAssertion(rdfs:label "left limbic lobe") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (right limbic lobe) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A limbic lobe that is part of a right cerebral hemisphere.") AnnotationAssertion( "BIRNLEX:1781") AnnotationAssertion( "FMA:72980") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002805") AnnotationAssertion(rdfs:label "right limbic lobe") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (left occipital lobe) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An occipital lobe that is part of a left cerebral hemisphere.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:1782") AnnotationAssertion( "FMA:72976") AnnotationAssertion(Annotation( "BIRNLEX:1782") "UMLS:C1281963") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002806") AnnotationAssertion(rdfs:label "left occipital lobe") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (right occipital lobe) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An occipital lobe that is part of a right cerebral hemisphere.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:1783") AnnotationAssertion( "FMA:72975") AnnotationAssertion( "OpenCyc:Mx8Ngh4rvgHsHZwpEbGdrcN5Y29ycB4rv9OFy5wpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "BIRNLEX:1783") "UMLS:C1281962") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002807") AnnotationAssertion(rdfs:label "right occipital lobe") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (left temporal lobe) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A temporal lobe that is part of a left cerebral hemisphere.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:1784") AnnotationAssertion( "FMA:72972") AnnotationAssertion( "OpenCyc:Mx8Ngh4rvgIFoJwpEbGdrcN5Y29ycB4rwQLi-ZwpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "BIRNLEX:1784") "UMLS:C1281971") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002808") AnnotationAssertion(rdfs:label "left temporal lobe") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (right temporal lobe) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A temporal lobe that is part of a right cerebral hemisphere.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:1785") AnnotationAssertion( "FMA:72971") AnnotationAssertion( "OpenCyc:Mx8Ngh4rvgHsHZwpEbGdrcN5Y29ycB4rwQLi-ZwpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "BIRNLEX:1785") "UMLS:C1281970") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002809") AnnotationAssertion(rdfs:label "right temporal lobe") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (right frontal lobe) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A frontal cortex that is part of a right cerebral hemisphere.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:1786") AnnotationAssertion( "FMA:72969") AnnotationAssertion(Annotation( "BIRNLEX:1786") "UMLS:C1281954") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002810") AnnotationAssertion(rdfs:label "right frontal lobe") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (left frontal lobe) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A frontal cortex that is part of a left cerebral hemisphere.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:1787") AnnotationAssertion( "FMA:72970") AnnotationAssertion(Annotation( "BIRNLEX:1787") "UMLS:C1281955") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002811") AnnotationAssertion(rdfs:label "left frontal lobe") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (left cerebral hemisphere) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A cerebral hemisphere that is in the left side of a brain.") AnnotationAssertion( "https://github.com/obophenotype/uberon/wiki/Modeling-paired-structures-Design-Pattern"^^xsd:anyURI) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:1795") AnnotationAssertion( "FMA:61819") AnnotationAssertion( "NCIT:C32955") AnnotationAssertion(Annotation( "ncithesaurus:Left_Cerebral_Hemisphere") "UMLS:C0228176") AnnotationAssertion(Annotation( "BIRNLEX:1795") "left hemisphere") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002812") AnnotationAssertion(rdfs:label "left cerebral hemisphere") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (right cerebral hemisphere) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A cerebral hemisphere that is in the right side of a brain.") AnnotationAssertion( "https://github.com/obophenotype/uberon/wiki/Modeling-paired-structures-Design-Pattern"^^xsd:anyURI) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:1797") AnnotationAssertion( "FMA:67292") AnnotationAssertion( "NCIT:C33472") AnnotationAssertion( "OpenCyc:Mx8Ngh4rvgHsHZwpEbGdrcN5Y29ycB4rvigx5ZwpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Right_Cerebral_Hemisphere") "UMLS:C0228175") AnnotationAssertion(Annotation( "BIRNLEX:1797") "right hemisphere") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002813") AnnotationAssertion(rdfs:label "right cerebral hemisphere") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (posterior superior fissure of cerebellum) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:psf") AnnotationAssertion( "FMA:83733") AnnotationAssertion( "HBA:9411") AnnotationAssertion( "MBA:1112") AnnotationAssertion( "NIFSTD_RETIRED:birnlex_20081254") AnnotationAssertion( "NLXANAT:20081254") AnnotationAssertion(Annotation( "FMA:83733") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "fissura post clivalis") AnnotationAssertion(Annotation( "FMA:83733") "post-clival fissure") AnnotationAssertion(Annotation( "FMA:83733") "postclival fissure") AnnotationAssertion(Annotation( "FMA:83733") "posterior superior fissure of cerebellum") AnnotationAssertion(Annotation( "FMA:83733") "postlunate fissure") AnnotationAssertion( "superior posterior cerebellar fissure") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NLXANAT:20081254") "posterior superior fissure") AnnotationAssertion( "UBERON:0002814") AnnotationAssertion(rdfs:label "posterior superior fissure of cerebellum") SubClassOf( ) # Class: (horizontal fissure of cerebellum) AnnotationAssertion(Annotation( "NLXANAT:20081255") "Fissure between cerebellar hemispheric lobules VIIA and VIIBi.") AnnotationAssertion( "horizontal fissure") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:hzf") AnnotationAssertion( "FMA:75135") AnnotationAssertion( "HBA:9412") AnnotationAssertion( "NIFSTD_RETIRED:birnlex_20081255") AnnotationAssertion( "NLXANAT:20081255") AnnotationAssertion(Annotation( "FMA:75135") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "fissura horizontalis cerebelli") AnnotationAssertion(Annotation( "FMA:75135") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "fissura intercruralis") AnnotationAssertion(Annotation( "FMA:75135") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "fissura intercruralis cerebelli") AnnotationAssertion(Annotation( "FMA:75135") "great horizontal fissure") AnnotationAssertion( "horizontal sulcus") AnnotationAssertion(Annotation( "FMA:75135") "intercrural fissure of cerebellum") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "fissura horizontalis") AnnotationAssertion( "UBERON:0002815") AnnotationAssertion(rdfs:label "horizontal fissure of cerebellum") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/8/8d/Gray702.png"^^xsd:anyURI) SubClassOf( ) # Class: (prepyramidal fissure of cerebellum) AnnotationAssertion(Annotation( "NLXANAT:20081257") "Fissure between cerebellar lobules VIIBii and VIII.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:ppf") AnnotationAssertion( "BAMS:ppyf") AnnotationAssertion( "FMA:75138") AnnotationAssertion( "MBA:1119") AnnotationAssertion( "NLXANAT:20081257") AnnotationAssertion(Annotation( "FMA:75138") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "fissura inferior anterior") AnnotationAssertion(Annotation( "FMA:75138") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "fissura parafloccularis") AnnotationAssertion(Annotation( "FMA:75138") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "fissura praepyramidalis") AnnotationAssertion(Annotation( "FMA:75138") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "fissura prebiventralis cerebelli") AnnotationAssertion(Annotation( "FMA:75138") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "fissura prepyramidalis") AnnotationAssertion(Annotation( "FMA:75138") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "fissura prepyramidalis cerebelli") AnnotationAssertion(Annotation( "FMA:75138") "prebiventral fissure of cerebellum") AnnotationAssertion(Annotation( "FMA:75138") "prepyramidal fissure of cerebellum") AnnotationAssertion(Annotation( "FMA:75138") "prepyramidal sulcus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NLXANAT:20081257") "prepyramidal fissure") AnnotationAssertion( "UBERON:0002816") AnnotationAssertion(rdfs:label "prepyramidal fissure of cerebellum") SubClassOf( ) # Class: (secondary fissure of cerebellum) AnnotationAssertion(Annotation( "NLXANAT:20081258") "Fissure between cerebellar lobules VIII and IX.") AnnotationAssertion(Annotation( "FMA:84043") "secondary fissure") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:scf") AnnotationAssertion( "BAMS:sec") AnnotationAssertion( "BAMS:sf") AnnotationAssertion( "FMA:84043") AnnotationAssertion( "HBA:9416") AnnotationAssertion( "MBA:3") AnnotationAssertion( "NIFSTD_RETIRED:birnlex_20081258") AnnotationAssertion( "NLXANAT:20081258") AnnotationAssertion(Annotation( "FMA:84043") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "fissura postpyramidalis cerebelli") AnnotationAssertion(Annotation( "FMA:84043") "post-pyramidal fissure of cerebellum") AnnotationAssertion(Annotation( "FMA:84043") "postpyramidal fissure") AnnotationAssertion(Annotation( "FMA:84043") "secondary fissure of cerebellum") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002817") AnnotationAssertion(rdfs:label "secondary fissure of cerebellum") SubClassOf( ) # Class: (posterolateral fissure of cerebellum) AnnotationAssertion(Annotation( "NLXANAT:20081259") "Fissure between cerebellar lobules IX and X.") AnnotationAssertion( "posterolateral fissure") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:plf") AnnotationAssertion( "FMA:83730") AnnotationAssertion( "HBA:9417") AnnotationAssertion( "MBA:11") AnnotationAssertion( "NIFSTD_RETIRED:birnlex_20081259") AnnotationAssertion( "NLXANAT:20081259") AnnotationAssertion(Annotation( "FMA:83730") "dorsolateral fissure of cerebellum") AnnotationAssertion(Annotation( "FMA:83730") "posterolateral fissure of cerebellum") AnnotationAssertion(Annotation( "FMA:83730") "prenodular fissure") AnnotationAssertion(Annotation( "FMA:83730") "prenodular sulcus") AnnotationAssertion(Annotation( "FMA:83730") "uvulonodular fissure") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002818") AnnotationAssertion(rdfs:label "posterolateral fissure of cerebellum") SubClassOf( ) # Class: (apex of cochlea) AnnotationAssertion(Annotation( ) "The cupula is a structure in the vestibular system, sensing proprioception. The cupula is located within the ampullae of each of the three semicircular canals. As fluid rushes by the cupula, hair cells within it sense rotational acceleration, and transmit the corresponding signal to the brain through the vestibulocochlear nerve (CN VIII) In their natural orientation within the head, the cupulae are located on the medial aspect of the semicircular canals. In this orientation, the kinocilia rest on the posterior aspect of the cupula. [WP,unvetted].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:2523") AnnotationAssertion( "BIRNLEX:2555") AnnotationAssertion( "BIRNLEX:2557") AnnotationAssertion( "FMA:75641") AnnotationAssertion(Annotation( "BIRNLEX:2557") "UMLS:C0458764") AnnotationAssertion(Annotation( "BIRNLEX:2555") "UMLS:C0458765") AnnotationAssertion(Annotation( "BIRNLEX:2523") "UMLS:C1184827") AnnotationAssertion(Annotation( "BIRNLEX:2555") "apex of cochlear canal") AnnotationAssertion(Annotation( "BIRNLEX:2555") "apex of the cochlear canal") AnnotationAssertion(Annotation( "FMA:75641") "cochlea apex") AnnotationAssertion(Annotation( "FMA:75641") "cupula of cochlea") AnnotationAssertion(Annotation( "BIRNLEX:2557") "cupula of the cochlear canal") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002819") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "apex of cochlea") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (zona arcuata of basilar membrane of cochlea) AnnotationAssertion(Annotation( ) Annotation( ) "The inner part of the basilar membrane of the cochlea that supports the spiral organ of Corti.") AnnotationAssertion( "UBERON:0002821") AnnotationAssertion( "UBERON:0031464") AnnotationAssertion(Annotation( ) "inner tunnel") AnnotationAssertion(Annotation( ) "zona arcuata") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:2528") AnnotationAssertion( "FMA:75709") AnnotationAssertion(Annotation( "BIRNLEX:2528") "UMLS:C1184862") AnnotationAssertion( "arcuate zone of basilar membrane") AnnotationAssertion( "arcuate zone of organ of corti") AnnotationAssertion( "basilar membrane of cochlea, zona arcuata") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002820") AnnotationAssertion(rdfs:label "zona arcuata of basilar membrane of cochlea") SubClassOf( ) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (macula lutea proper) AnnotationAssertion(Annotation( ) "The part of the macula lutea that excludes the fovea.") AnnotationAssertion( "consider obsoletion") AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:2542") AnnotationAssertion( "FMA:58671") AnnotationAssertion(Annotation( "BIRNLEX:2542") "UMLS:C0934637") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002822") AnnotationAssertion(rdfs:label "macula lutea proper") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (clivus of fovea centralis) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:2544") AnnotationAssertion( "FMA:58674") AnnotationAssertion(Annotation( "BIRNLEX:2544") "UMLS:C0929757") AnnotationAssertion(Annotation( "BIRNLEX:2544") "UMLS:C0929760") AnnotationAssertion(Annotation( "BIRNLEX:2544") "clivus of macula lutea") AnnotationAssertion(Annotation( "FMA:58674") "fovea centralis clivus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002823") AnnotationAssertion(rdfs:comment "NIF differs from FMA") AnnotationAssertion(rdfs:label "clivus of fovea centralis") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (vestibular ganglion) AnnotationAssertion(Annotation( ) Annotation( ) "The ganglion of the vestibular nerve. It contains the cell bodies of the bipolar primary afferent neurons whose peripheral processes form synaptic contact with hair cells of the vestibular sensory end organs[WP,unvetted]. Distributed to the maculae of the utricle and saccule and to the ampullary crests of the semicircular ducts. The vestibular fibers arise in bipolar cells in the vestibular ganglion in the internal acoustic meatus.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:GvVIII") AnnotationAssertion( "BIRNLEX:2549") AnnotationAssertion( "EMAPA:17573") AnnotationAssertion( "FMA:53435") AnnotationAssertion( "MA:0001086") AnnotationAssertion( "NCIT:C33870") AnnotationAssertion( "RETIRED_EHDAA2:0002199") AnnotationAssertion(Annotation( "BIRNLEX:2549") "UMLS:C0036286") AnnotationAssertion(Annotation( "ncithesaurus:Vestibular_Ganglion") "UMLS:C0036286") AnnotationAssertion(Annotation( "BIRNLEX:2549") "UMLS:C0446706") AnnotationAssertion( "VHOG:0000682") AnnotationAssertion(Annotation( "BIRNLEX:2549") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=495") AnnotationAssertion(Annotation( "FMA:53435") "Scarpa's ganglion") AnnotationAssertion(Annotation( ) "vestibular part of vestibulocochlear ganglion") AnnotationAssertion(Annotation( "MA:0001086") "vestibulocochlear VIII ganglion vestibular component") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:495") Annotation( ) "nucleus nervi oculomotorii, pars medialis") AnnotationAssertion(Annotation( "EMAPA:17573") "vestibulocochlear ganglion vestibular component") AnnotationAssertion( "UBERON:0002824") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "vestibular ganglion") SubClassOf( ) SubClassOf(Annotation( "ncithesaurus"^^xsd:string) ) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (superior part of vestibular ganglion) AnnotationAssertion(Annotation( "ISBN:0-683-40008-8"^^xsd:string) Annotation( "MP:0000028") "The part of the vestibular ganglion that receives fibers from the maculae of the utricle and the sacculae and the ampullae of the anterior and lateral semicircular ducts.") AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:2551") AnnotationAssertion( "FMA:77531") AnnotationAssertion( "MA:0002778") AnnotationAssertion(Annotation( "BIRNLEX:2551") "UMLS:C1186166") AnnotationAssertion(Annotation( "FMA:77531") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "pars superior ganglionis vestibularis") AnnotationAssertion(Annotation( "MA:0002778") "vestibular ganglion superior part") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "MA:0002778") "pars superior vestibularis") AnnotationAssertion( "UBERON:0002825") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "superior part of vestibular ganglion") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (inferior part of vestibular ganglion) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:2552") AnnotationAssertion( "FMA:77532") AnnotationAssertion( "MA:0002779") AnnotationAssertion(Annotation( "BIRNLEX:2552") "UMLS:C1186167") AnnotationAssertion(Annotation( "FMA:77532") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "pars inferior ganglionis vestibularis") AnnotationAssertion(Annotation( "MA:0002779") "vestibular ganglion inferior part") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002826") AnnotationAssertion(rdfs:label "inferior part of vestibular ganglion") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (vestibulocochlear ganglion) AnnotationAssertion(Annotation( "MGI:smb"^^xsd:string) Annotation( "MP:0003703") "The group of neuron cell bodies associated with the eighth cranial nerve during embryogenesis; splits in later development to form the cochlear and vestibular ganglia.") AnnotationAssertion( "Consider follow MA naming scheme.") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0000588") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "The sensory ganglion of the ear. (See Anatomical Atlas entry for statoacoustic ganglion by T. Whitfield.)[TAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000696") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "PMID:21452441 Park BY, Saint-Jeannet JP, Induction and Segregation of the Vertebrate Cranial Placodes. Developmental Biology (2010)") "(During the development of the inner ear in a vertebrate embryo) As the otic placode invaginates into a cup neuroblasts delaminate from the anterior ventral aspect of the otic epithelium to give rise to neurons of the vestibulocochlear (statoacoustic) ganglion of cranial nerve VIII.[well established][VHOG]") AnnotationAssertion(Annotation( ) "The cell bodies of the cochlear nerve lie within the central aspect of the cochlea and are collectively known as the spiral ganglion. This name reflects the fact that the cell bodies, considered as a unit, have a spiral (or perhaps more accurately, a helical) shape, reflecting the shape of the cochlea. The terms 'cochlear nerve fiber' and 'spiral ganglion cell' are used, to some degree, interchangeably, although the former may be used to more specifically refer to the central axons of the cochlear nerve. These central axons exit the cochlea at its base, where it forms a nerve trunk. In humans, this aspect of the nerve is roughly one inch in length. It projects centrally to the brainstem, where its fibers synapse with the cell bodies of the cochlear nucleus") AnnotationAssertion(Annotation( "ZFA:0000588") "SAG") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:2564") AnnotationAssertion( "EFO:0003543") AnnotationAssertion( "EHDAA2:0002196") AnnotationAssertion( "EHDAA:5569") AnnotationAssertion( "EHDAA:6653") AnnotationAssertion( "EMAPA:16982") AnnotationAssertion( "EMAPA:17571") AnnotationAssertion( "MA:0001084") AnnotationAssertion( "TAO:0000588") AnnotationAssertion(Annotation( "BIRNLEX:2564") "UMLS:C0037959") AnnotationAssertion( "VHOG:0000696") AnnotationAssertion( "XAO:0004142") AnnotationAssertion( "ZFA:0000588") AnnotationAssertion(Annotation( "BIRNLEX:2564") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=496") AnnotationAssertion(Annotation( "EMAPA:16982") "acoustic ganglion VIII") AnnotationAssertion(Annotation( "EHDAA2:0002196") "acoustico-vestibular VIII ganglion") AnnotationAssertion(Annotation( "ZFA:0000588") "auditory ganglion") AnnotationAssertion(Annotation( "ZFA:0000588") "gVIII") AnnotationAssertion( "ganglion VIII") AnnotationAssertion(Annotation( "ZFA:0000588") "statoacoustic (VIII) ganglion") AnnotationAssertion(Annotation( "ZFA:0000588") "statoacoustic ganglia") AnnotationAssertion(Annotation( "XAO:0004142") "statoacoustic ganglion") AnnotationAssertion(Annotation( "MA:0001084") "vestibulocochlear VIII ganglion") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "VHOG:0000696") "acoustic ganglion") AnnotationAssertion(Annotation( "BIRNLEX:2564") "auditory ganglion") AnnotationAssertion(Annotation( "NeuroNames:496") Annotation( ) "nucleus nervi oculomotorii ventrolateralis") AnnotationAssertion(Annotation( "NeuroNames:496") Annotation( ) "nucleus nervi oculomotorii, pars ventralis") AnnotationAssertion(Annotation( "VHOG:0000696") "statoacoustic VIII ganglion") AnnotationAssertion(Annotation( "XAO:0004142") Annotation( ) "vestibulocochlear ganglia") AnnotationAssertion( "UBERON:0002827") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "vestibulocochlear ganglion") SubClassOf(Annotation( "ZFA"^^xsd:string) ) SubClassOf( ) SubClassOf(Annotation( "ZFA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "NCBIBook:NBK53175"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (ventral cochlear nucleus) AnnotationAssertion(Annotation( ) "The ventral cochlear nucleus (or anterior, or accessory), placed between the two divisions of the cochlear nerve, is on the ventral aspect of the inferior peduncle. Composed of several regions of distinct cell types, this nucleus serves primarily as a relay station for ascending auditory information. Bushy cells in the anterior ventral cochlear nucleus (AVCN), which receive end bulbs of held from auditory nerve fibers, project to the superior olivary complex through the trapezoid body and intermediate acoustic stria. Other cell types project to the lateral lemniscus and the inferior colliculus directly. [WP,unvetted].") AnnotationAssertion(Annotation( "BIRNLEX:2567") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "VCo") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:VC") AnnotationAssertion( "BAMS:VCO") AnnotationAssertion( "BIRNLEX:2567") AnnotationAssertion( "BM:CV") AnnotationAssertion( "DHBA:12439") AnnotationAssertion( "FMA:54621") AnnotationAssertion( "HBA:9531") AnnotationAssertion( "MBA:101") AnnotationAssertion(Annotation( "BIRNLEX:2567") "UMLS:C0175500") AnnotationAssertion(Annotation( "BIRNLEX:2567") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=722") AnnotationAssertion(Annotation( "FMA:54621") "anterior cochlear nucleus") AnnotationAssertion(Annotation( "BIRNLEX:2567") "c1281209") AnnotationAssertion(Annotation( "FMA:54621") "ventral cochlear nucleus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:722") "accessory cochlear nucleus") AnnotationAssertion(Annotation( "NeuroNames:722") Annotation( ) "nucleus acustici accessorici") AnnotationAssertion(Annotation( "NeuroNames:722") Annotation( ) "nucleus cochlearis anterior") AnnotationAssertion(Annotation( "NeuroNames:722") Annotation( ) "nucleus cochlearis ventralis") AnnotationAssertion(Annotation( "NeuroNames:722") "ventral cochlear nuclei") AnnotationAssertion(Annotation( "BAMS:VCO") "ventral coclear nucleus") AnnotationAssertion(Annotation( "NeuroNames:722") "ventral division of cochlear nucleus") AnnotationAssertion( "UBERON:0002828") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "ventral cochlear nucleus") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/b/bb/Gray760.png"^^xsd:anyURI) SubClassOf( ) DisjointClasses(Annotation( "lexical"^^xsd:string) ) # Class: (dorsal cochlear nucleus) AnnotationAssertion(Annotation( ) "The dorsal cochlear nucleus (DCN, also known as the 'tuberculum acousticum'), is a cortex-like structure on the dorso-lateral surface of the brainstem. Along with the ventral cochlear nucleus, it forms the cochlear nucleus, where all auditory nerve fibers from the cochlea form their first synapses. [WP,unvetted].") AnnotationAssertion(Annotation( "BIRNLEX:2569") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "DCo") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:DC") AnnotationAssertion( "BAMS:DCO") AnnotationAssertion( "BAMS:DCo") AnnotationAssertion( "BIRNLEX:2569") AnnotationAssertion( "BM:Me-CD") AnnotationAssertion( "DHBA:12438") AnnotationAssertion( "EMAPA:35289") AnnotationAssertion( "FMA:54624") AnnotationAssertion( "HBA:9530") AnnotationAssertion( "MBA:96") AnnotationAssertion( "NCIT:C32471") AnnotationAssertion(Annotation( "BIRNLEX:2569") "UMLS:C0175499") AnnotationAssertion(Annotation( "ncithesaurus:Dorsal_Cochlear_Nucleus") "UMLS:C0175499") AnnotationAssertion(Annotation( "BIRNLEX:2569") "UMLS:C1281210") AnnotationAssertion(Annotation( "BIRNLEX:2569") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=721") AnnotationAssertion(Annotation( "FMA:54624") "dorsal cochlear nucleus") AnnotationAssertion(Annotation( "FMA:54624") "dorsal division of cochlear nucleus") AnnotationAssertion(Annotation( "FMA:54624") "posterior cochlear nucleus") AnnotationAssertion( "tuberculum acousticum") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BAMS:DCO") "dorsal coclear nucleus") AnnotationAssertion(Annotation( "NeuroNames:721") Annotation( ) "nucleus cochlearis dorsalis") AnnotationAssertion(Annotation( ) Annotation( ) "nucleus cochlearis posterior") AnnotationAssertion( "UBERON:0002829") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "dorsal cochlear nucleus") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/b/bb/Gray760.png"^^xsd:anyURI) SubClassOf( ) # Class: (anteroventral cochlear nucleus) AnnotationAssertion(Annotation( "BIRNLEX:2572") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "AVCo") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:AVCo") AnnotationAssertion( "BIRNLEX:2572") AnnotationAssertion( "DHBA:12440") AnnotationAssertion( "FMA:72571") AnnotationAssertion( "HBA:9532") AnnotationAssertion(Annotation( "BIRNLEX:2572") "UMLS:C0926557") AnnotationAssertion(Annotation( "BIRNLEX:2572") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=723") AnnotationAssertion(Annotation( "BIRNLEX:2572") "anterior part of anterior cochlear nucleus") AnnotationAssertion(Annotation( "FMA:72571") "anteroventral auditory nucleus") AnnotationAssertion(Annotation( "BIRNLEX:2572") "nucleus magnocellularis") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:723") "anterior part of the ventral cochlear nucleus") AnnotationAssertion(Annotation( "NeuroNames:723") "anterior ventral cochlear nucleus") AnnotationAssertion(Annotation( "NeuroNames:723") Annotation( ) "nucleus cochlearis anteroventralis") AnnotationAssertion(Annotation( "NeuroNames:723") "ventral cochlear nucleus, anterior part") AnnotationAssertion(Annotation( "NeuroNames:723") "ventral coclear nucleus anterior part") AnnotationAssertion( "UBERON:0002830") AnnotationAssertion(rdfs:label "anteroventral cochlear nucleus") SubClassOf( ) SubClassOf(Annotation( "NIFSTD"^^xsd:string) ObjectSomeValuesFrom( )) DisjointClasses(Annotation( "lexical"^^xsd:string) ) # Class: (posteroventral cochlear nucleus) AnnotationAssertion(Annotation( "BIRNLEX:2573") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "PVCo") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:PVCo") AnnotationAssertion( "BIRNLEX:2573") AnnotationAssertion( "DHBA:12441") AnnotationAssertion( "FMA:72572") AnnotationAssertion( "HBA:9533") AnnotationAssertion(Annotation( "BIRNLEX:2573") "UMLS:C0926558") AnnotationAssertion(Annotation( "BIRNLEX:2573") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=724") AnnotationAssertion(Annotation( "BIRNLEX:2573") "posterior part of anterior cochlear nucleus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:724") Annotation( ) "nucleus cochlearis posteroventralis") AnnotationAssertion(Annotation( "NeuroNames:724") "posterior part of the ventral cochlear nucleus") AnnotationAssertion(Annotation( "NeuroNames:724") "posterior ventral cochlear nucleus") AnnotationAssertion(Annotation( "NeuroNames:724") "ventral cochlear nucleus, posterior part") AnnotationAssertion(Annotation( "NeuroNames:724") "ventral coclear nucleus posterior part") AnnotationAssertion( "UBERON:0002831") AnnotationAssertion(rdfs:label "posteroventral cochlear nucleus") SubClassOf( ) SubClassOf(Annotation( "NIFSTD"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (ventral nucleus of trapezoid body) AnnotationAssertion(Annotation( ) "A small nucleus of the periolivary complex located laterally to the MNTB, and ventral to the MSO.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:2576") AnnotationAssertion( "DHBA:12461") AnnotationAssertion( "FMA:72477") AnnotationAssertion(Annotation( "BIRNLEX:2576") "UMLS:C0228437") AnnotationAssertion(Annotation( "BIRNLEX:2576") "UMLS:C1289449") AnnotationAssertion(Annotation( ) "VNTB") AnnotationAssertion(Annotation( "FMA:72477") "anterior nucleus of trapezoid body") AnnotationAssertion(Annotation( "FMA:72477") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "nucleus anterior corporis trapezoidei") AnnotationAssertion(Annotation( "NeuroNames:1283") Annotation( ) "nucleus ventralis corporis trapezoidei") AnnotationAssertion(Annotation( ) "ventral trapezoid nucleus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002832") AnnotationAssertion(rdfs:label "ventral nucleus of trapezoid body") SubClassOf( ) SubClassOf(Annotation( "Wikipedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (medial nucleus of trapezoid body) AnnotationAssertion(Annotation( "BIRNLEX:2595") "Nucleus in the pontine tegmentum of most mammals that receives projections from the ventral cochlear nucleus via the large specialized synapse, the Calyx of Held. It is not clear whether a well defined nucleus is present in humans, although humans may possess scattered cells with similar input.") AnnotationAssertion( "BIRNLEX:2595") AnnotationAssertion( "DHBA:12460") AnnotationAssertion( "FMA:75732") AnnotationAssertion(Annotation( ) "MNTB") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002833") AnnotationAssertion(rdfs:label "medial nucleus of trapezoid body") SubClassOf( ) SubClassOf(Annotation( "Wikipedia"^^xsd:string) ObjectSomeValuesFrom( )) DisjointClasses(Annotation( "lexical"^^xsd:string) ) # Class: (cervical dorsal root ganglion) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:2599") AnnotationAssertion( "FMA:6005") AnnotationAssertion(Annotation( "BIRNLEX:2599") "UMLS:C0457466") AnnotationAssertion(Annotation( "FMA:6005") "cervical dorsal root ganglion") AnnotationAssertion(Annotation( "FMA:6005") "cervical spinal ganglion") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002834") AnnotationAssertion(rdfs:label "cervical dorsal root ganglion") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (thoracic dorsal root ganglion) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A dorsal root ganglion that is part of a thorax [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:2600") AnnotationAssertion( "FMA:6006") AnnotationAssertion(Annotation( "BIRNLEX:2600") "UMLS:C0457467") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "dorsal root ganglion of thorax") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "ganglion of dorsal root of thorax") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "ganglion spinalis of thorax") AnnotationAssertion(Annotation( "FMA:6006") "thoracic dorsal root ganglion") AnnotationAssertion(Annotation( "FMA:6006") "thoracic spinal ganglion") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "thorax dorsal root ganglion") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "thorax ganglion of dorsal root") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "thorax ganglion spinalis") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002835") AnnotationAssertion(rdfs:label "thoracic dorsal root ganglion") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lumbar dorsal root ganglion) AnnotationAssertion(Annotation( "MP:0006404") "The group of nerve cell bodies located on the dorsal spinal roots within the vertebral column at the level of the lumbar vertebrae.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:2601") AnnotationAssertion( "FMA:6007") AnnotationAssertion(Annotation( "BIRNLEX:2601") "UMLS:C0457468") AnnotationAssertion(Annotation( "FMA:6007") "lumbar dorsal root ganglion") AnnotationAssertion(Annotation( "FMA:6007") "lumbar spinal ganglion") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002836") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "lumbar dorsal root ganglion") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (sacral dorsal root ganglion) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:2602") AnnotationAssertion( "FMA:6008") AnnotationAssertion(Annotation( "BIRNLEX:2602") "UMLS:C0457469") AnnotationAssertion(Annotation( "FMA:6008") "sacral dorsal root ganglion") AnnotationAssertion(Annotation( "FMA:6008") "sacral spinal ganglion") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002837") AnnotationAssertion(rdfs:label "sacral dorsal root ganglion") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (first cervical dorsal root ganglion) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:2603") AnnotationAssertion( "EMAPA:25144") AnnotationAssertion( "FMA:6010") AnnotationAssertion(Annotation( "BIRNLEX:2603") "UMLS:C0501468") AnnotationAssertion(Annotation( "FMA:6010") "first cervical dorsal root ganglion") AnnotationAssertion(Annotation( "FMA:6010") "first cervical spinal ganglion") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002838") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "first cervical dorsal root ganglion") SubClassOf( ) # Class: (second cervical dorsal root ganglion) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:2604") AnnotationAssertion( "EMAPA:25155") AnnotationAssertion( "FMA:6315") AnnotationAssertion(Annotation( "BIRNLEX:2604") "UMLS:C0501693") AnnotationAssertion(Annotation( "EMAPA:25155") "C2 dorsal root ganglion") AnnotationAssertion(Annotation( "FMA:6315") "second cervical dorsal root ganglion") AnnotationAssertion(Annotation( "FMA:6315") "second cervical spinal ganglion") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002839") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "second cervical dorsal root ganglion") SubClassOf( ) # Class: (third cervical dorsal root ganglion) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:2605") AnnotationAssertion( "EMAPA:25156") AnnotationAssertion( "FMA:6316") AnnotationAssertion(Annotation( "BIRNLEX:2605") "UMLS:C0501694") AnnotationAssertion(Annotation( "EMAPA:25156") "C3 dorsal root ganglion") AnnotationAssertion(Annotation( "FMA:6316") "third cervical dorsal root ganglion") AnnotationAssertion(Annotation( "FMA:6316") "third cervical spinal ganglion") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002840") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "third cervical dorsal root ganglion") SubClassOf( ) # Class: (fourth cervical dorsal root ganglion) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:2606") AnnotationAssertion( "EMAPA:25157") AnnotationAssertion( "FMA:6317") AnnotationAssertion(Annotation( "BIRNLEX:2606") "UMLS:C0501695") AnnotationAssertion(Annotation( "EMAPA:25157") "C4 dorsal root ganglion") AnnotationAssertion(Annotation( "FMA:6317") "fourth cervical dorsal root ganglion") AnnotationAssertion(Annotation( "FMA:6317") "fourth cervical spinal ganglion") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002841") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "fourth cervical dorsal root ganglion") SubClassOf( ) # Class: (fifth cervical dorsal root ganglion) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:2607") AnnotationAssertion( "EMAPA:25158") AnnotationAssertion( "FMA:6318") AnnotationAssertion(Annotation( "BIRNLEX:2607") "UMLS:C0501696") AnnotationAssertion(Annotation( "EMAPA:25158") "C5 dorsal root ganglion") AnnotationAssertion(Annotation( "FMA:6318") "fifth cervical dorsal root ganglion") AnnotationAssertion(Annotation( "FMA:6318") "fifth cervical spinal ganglion") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002842") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "fifth cervical dorsal root ganglion") SubClassOf( ) # Class: (seventh cervical dorsal root ganglion) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:2609") AnnotationAssertion( "EMAPA:25160") AnnotationAssertion( "FMA:6360") AnnotationAssertion(Annotation( "BIRNLEX:2609") "UMLS:C0501737") AnnotationAssertion(Annotation( "EMAPA:25160") "C7 dorsal root ganglion") AnnotationAssertion(Annotation( "FMA:6360") "seventh cervical dorsal root ganglion") AnnotationAssertion(Annotation( "FMA:6360") "seventh cervical spinal ganglion") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002843") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "seventh cervical dorsal root ganglion") SubClassOf( ) # Class: (eighth cervical dorsal root ganglion) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:2610") AnnotationAssertion( "FMA:6361") AnnotationAssertion(Annotation( "BIRNLEX:2610") "UMLS:C0501738") AnnotationAssertion(Annotation( "FMA:6361") "eighth cervical dorsal root ganglion") AnnotationAssertion(Annotation( "FMA:6361") "eighth cervical spinal ganglion") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002844") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "eighth cervical dorsal root ganglion") SubClassOf( ) # Class: (first thoracic dorsal root ganglion) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:2611") AnnotationAssertion( "EMAPA:25174") AnnotationAssertion( "FMA:6321") AnnotationAssertion(Annotation( "BIRNLEX:2611") "UMLS:C0501699") AnnotationAssertion(Annotation( "FMA:6321") "first thoracic dorsal root ganglion") AnnotationAssertion(Annotation( "FMA:6321") "first thoracic spinal ganglion") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002845") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "first thoracic dorsal root ganglion") SubClassOf( ) # Class: (second thoracic dorsal root ganglion) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:2612") AnnotationAssertion( "EMAPA:25175") AnnotationAssertion( "FMA:6322") AnnotationAssertion(Annotation( "BIRNLEX:2612") "UMLS:C0501700") AnnotationAssertion(Annotation( "FMA:6322") "second thoracic dorsal root ganglion") AnnotationAssertion(Annotation( "FMA:6322") "second thoracic spinal ganglion") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002846") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "second thoracic dorsal root ganglion") SubClassOf( ) # Class: (third thoracic dorsal root ganglion) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:2613") AnnotationAssertion( "EMAPA:25176") AnnotationAssertion( "FMA:6323") AnnotationAssertion(Annotation( "BIRNLEX:2613") "UMLS:C0501701") AnnotationAssertion(Annotation( "FMA:6323") "third thoracic dorsal root ganglion") AnnotationAssertion(Annotation( "FMA:6323") "third thoracic spinal ganglion") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002847") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "third thoracic dorsal root ganglion") SubClassOf( ) # Class: (fifth thoracic dorsal root ganglion) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:2615") AnnotationAssertion( "EMAPA:25179") AnnotationAssertion( "FMA:6325") AnnotationAssertion(Annotation( "BIRNLEX:2615") "UMLS:C0501703") AnnotationAssertion(Annotation( "FMA:6325") "fifth thoracic dorsal root ganglion") AnnotationAssertion(Annotation( "FMA:6325") "fifth thoracic spinal ganglion") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002848") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "fifth thoracic dorsal root ganglion") SubClassOf( ) # Class: (sixth thoracic dorsal root ganglion) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:2616") AnnotationAssertion( "EMAPA:25178") AnnotationAssertion( "FMA:6326") AnnotationAssertion(Annotation( "BIRNLEX:2616") "UMLS:C0501704") AnnotationAssertion(Annotation( "FMA:6326") "sixth thoracic dorsal root ganglion") AnnotationAssertion(Annotation( "FMA:6326") "sixth thoracic spinal ganglion") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002849") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "sixth thoracic dorsal root ganglion") SubClassOf( ) # Class: (seventh thoracic dorsal root ganglion) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:2617") AnnotationAssertion( "EMAPA:25180") AnnotationAssertion( "FMA:6327") AnnotationAssertion(Annotation( "BIRNLEX:2617") "UMLS:C0501705") AnnotationAssertion(Annotation( "FMA:6327") "seventh thoracic dorsal root ganglion") AnnotationAssertion(Annotation( "FMA:6327") "seventh thoracic spinal ganglion") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002850") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "seventh thoracic dorsal root ganglion") SubClassOf( ) # Class: (eighth thoracic dorsal root ganglion) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:2618") AnnotationAssertion( "EMAPA:25181") AnnotationAssertion( "FMA:6328") AnnotationAssertion(Annotation( "BIRNLEX:2618") "UMLS:C0501706") AnnotationAssertion(Annotation( "FMA:6328") "eighth thoracic dorsal root ganglion") AnnotationAssertion(Annotation( "FMA:6328") "eighth thoracic spinal ganglion") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002851") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "eighth thoracic dorsal root ganglion") SubClassOf( ) # Class: (ninth thoracic dorsal root ganglion) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:2619") AnnotationAssertion( "EMAPA:25182") AnnotationAssertion( "FMA:6329") AnnotationAssertion(Annotation( "BIRNLEX:2619") "UMLS:C0501707") AnnotationAssertion(Annotation( "FMA:6329") "ninth thoracic dorsal root ganglion") AnnotationAssertion(Annotation( "FMA:6329") "ninth thoracic spinal ganglion") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002852") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "ninth thoracic dorsal root ganglion") SubClassOf( ) # Class: (tenth thoracic dorsal root ganglion) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:2620") AnnotationAssertion( "EMAPA:25183") AnnotationAssertion( "FMA:6330") AnnotationAssertion(Annotation( "BIRNLEX:2620") "UMLS:C0501708") AnnotationAssertion(Annotation( "FMA:6330") "tenth thoracic dorsal root ganglion") AnnotationAssertion(Annotation( "FMA:6330") "tenth thoracic spinal ganglion") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002853") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "tenth thoracic dorsal root ganglion") SubClassOf( ) # Class: (eleventh thoracic dorsal root ganglion) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:2621") AnnotationAssertion( "EMAPA:25184") AnnotationAssertion( "FMA:6331") AnnotationAssertion(Annotation( "BIRNLEX:2621") "UMLS:C0501709") AnnotationAssertion(Annotation( "FMA:6331") "eleventh thoracic dorsal root ganglion") AnnotationAssertion(Annotation( "FMA:6331") "eleventh thoracic spinal ganglion") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002854") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "eleventh thoracic dorsal root ganglion") SubClassOf( ) # Class: (twelfth thoracic dorsal root ganglion) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:2622") AnnotationAssertion( "EMAPA:25185") AnnotationAssertion( "FMA:6332") AnnotationAssertion(Annotation( "BIRNLEX:2622") "UMLS:C0501710") AnnotationAssertion(Annotation( "FMA:6332") "twelfth thoracic dorsal root ganglion") AnnotationAssertion(Annotation( "FMA:6332") "twelfth thoracic spinal ganglion") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002855") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "twelfth thoracic dorsal root ganglion") SubClassOf( ) # Class: (second lumbar dorsal root ganglion) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:2623") AnnotationAssertion( "EMAPA:25165") AnnotationAssertion( "FMA:6336") AnnotationAssertion(Annotation( "BIRNLEX:2623") "UMLS:C0501714") AnnotationAssertion(Annotation( "FMA:6336") "second lumbar dorsal root ganglion") AnnotationAssertion(Annotation( "FMA:6336") "second lumbar spinal ganglion") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002856") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "second lumbar dorsal root ganglion") SubClassOf( ) # Class: (first lumbar dorsal root ganglion) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:2624") AnnotationAssertion( "EMAPA:25164") AnnotationAssertion( "FMA:6335") AnnotationAssertion(Annotation( "BIRNLEX:2624") "UMLS:C0501713") AnnotationAssertion(Annotation( "FMA:6335") "first lumbar dorsal root ganglion") AnnotationAssertion(Annotation( "FMA:6335") "first lumbar spinal ganglion") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002857") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "first lumbar dorsal root ganglion") SubClassOf( ) # Class: (third lumbar dorsal root ganglion) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:2625") AnnotationAssertion( "EMAPA:25166") AnnotationAssertion( "FMA:6337") AnnotationAssertion(Annotation( "BIRNLEX:2625") "UMLS:C0501715") AnnotationAssertion(Annotation( "FMA:6337") "third lumbar dorsal root ganglion") AnnotationAssertion(Annotation( "FMA:6337") "third lumbar spinal ganglion") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002858") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "third lumbar dorsal root ganglion") SubClassOf( ) # Class: (fifth lumbar dorsal root ganglion) AnnotationAssertion(Annotation( "MP:0001022") "The group of nerve cell bodies located on the dorsal spinal roots within the vertebral column at the level of the fifth lumbar vertebra.") AnnotationAssertion( "UBERON:0003944") AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:2627") AnnotationAssertion( "EMAPA:25168") AnnotationAssertion( "FMA:6339") AnnotationAssertion(Annotation( "BIRNLEX:2627") "UMLS:C0501717") AnnotationAssertion(Annotation( "MP:0001022") "L5 dorsal root ganglion") AnnotationAssertion(Annotation( "FMA:6339") "fifth lumbar dorsal root ganglion") AnnotationAssertion(Annotation( "FMA:6339") "fifth lumbar spinal ganglion") AnnotationAssertion( "uberon") AnnotationAssertion( "L5 ganglion") AnnotationAssertion( "UBERON:0002859") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "fifth lumbar dorsal root ganglion") SubClassOf( ) # Class: (first sacral dorsal root ganglion) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:2628") AnnotationAssertion( "EMAPA:25170") AnnotationAssertion( "FMA:6342") AnnotationAssertion(Annotation( "BIRNLEX:2628") "UMLS:C0501720") AnnotationAssertion(Annotation( "FMA:6342") "first sacral dorsal root ganglion") AnnotationAssertion(Annotation( "FMA:6342") "first sacral spinal ganglion") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002860") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "first sacral dorsal root ganglion") SubClassOf( ) # Class: (second sacral dorsal root ganglion) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:2629") AnnotationAssertion( "EMAPA:25171") AnnotationAssertion( "FMA:6343") AnnotationAssertion(Annotation( "BIRNLEX:2629") "UMLS:C0501721") AnnotationAssertion(Annotation( "FMA:6343") "second sacral dorsal root ganglion") AnnotationAssertion(Annotation( "FMA:6343") "second sacral spinal ganglion") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002861") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "second sacral dorsal root ganglion") SubClassOf( ) # Class: (third sacral dorsal root ganglion) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:2630") AnnotationAssertion( "EMAPA:25172") AnnotationAssertion( "FMA:6344") AnnotationAssertion(Annotation( "BIRNLEX:2630") "UMLS:C0501722") AnnotationAssertion(Annotation( "FMA:6344") "third sacral dorsal root ganglion") AnnotationAssertion(Annotation( "FMA:6344") "third sacral spinal ganglion") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002862") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "third sacral dorsal root ganglion") SubClassOf( ) # Class: (fifth sacral dorsal root ganglion) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:2632") AnnotationAssertion( "FMA:6346") AnnotationAssertion(Annotation( "BIRNLEX:2632") "UMLS:C0501724") AnnotationAssertion(Annotation( "FMA:6346") "fifth sacral dorsal root ganglion") AnnotationAssertion(Annotation( "FMA:6346") "fifth sacral spinal ganglion") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002863") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "fifth sacral dorsal root ganglion") SubClassOf( ) # Class: (accessory cuneate nucleus) AnnotationAssertion(Annotation( ) "The accessory cuneate nucleus is located lateral to the cuneate nucleus in the medulla oblongata at the level of the sensory decussation. It receives input from cervical spinal nerves and transmits that information to the cerebellum. These fibers are called cuneocerebellar fibers. In this function, the accessory cuneate nucleus is comparable to the upper extremity portion of the posterior spinocerebellar tract. [WP,unvetted].") AnnotationAssertion(Annotation( "BIRNLEX:2634") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "ACu") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:ACu") AnnotationAssertion( "BAMS:ECU") AnnotationAssertion( "BAMS:ECu") AnnotationAssertion( "BIRNLEX:2634") AnnotationAssertion( "BM:Me-CX") AnnotationAssertion( "EV:0100285") AnnotationAssertion( "FMA:72603") AnnotationAssertion( "HBA:9513") AnnotationAssertion( "MBA:903") AnnotationAssertion(Annotation( "BIRNLEX:2634") "UMLS:C0152397") AnnotationAssertion(Annotation( "BIRNLEX:2634") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=768") AnnotationAssertion(Annotation( "FMA:72603") "external cuneate nucleus") AnnotationAssertion(Annotation( "FMA:72603") "lateral cuneate nucleus") AnnotationAssertion(Annotation( "FMA:72603") "nucleus of corpus restiforme") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BIRNLEX:2634") "external cuneate nucleus") AnnotationAssertion(Annotation( "NeuroNames:768") "external cuneate nucleus (Monakow, Blumenau 1891)") AnnotationAssertion(Annotation( "BIRNLEX:2634") "lateral cuneate nucleus") AnnotationAssertion(Annotation( "NeuroNames:768") Annotation( ) "nucleus Monakow") AnnotationAssertion(Annotation( "NeuroNames:768") Annotation( ) "nucleus cuneatis externus") AnnotationAssertion(Annotation( ) Annotation( ) "nucleus cuneatus accessorius") AnnotationAssertion(Annotation( "NeuroNames:768") Annotation( ) "nucleus cuneatus lateralis") AnnotationAssertion(Annotation( "NeuroNames:768") Annotation( ) "nucleus funiculi cuneatus externus") AnnotationAssertion(Annotation( "BIRNLEX:2634") "nucleus of corpus restiforme") AnnotationAssertion( "UBERON:0002864") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "accessory cuneate nucleus") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/9/94/Gray694.png"^^xsd:anyURI) SubClassOf( ) # Class: (arcuate nucleus of medulla) AnnotationAssertion(Annotation( "BIRNLEX:2635") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "ArcM") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:ArcM") AnnotationAssertion( "BIRNLEX:2635") AnnotationAssertion( "DHBA:12536") AnnotationAssertion( "FMA:72609") AnnotationAssertion( "HBA:9519") AnnotationAssertion(Annotation( "BIRNLEX:2635") "UMLS:C0228544") AnnotationAssertion(Annotation( "BIRNLEX:2635") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=775") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "arcuate hypothalamic nucleus of medulla") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "arcuate nucleus of hypothalamus of medulla") AnnotationAssertion(Annotation( "FMA:72609") "arcuate nucleus-1") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "arcuate nucleus-2 of medulla") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "arcuate periventricular nucleus of medulla") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "infundibular hypothalamic nucleus of medulla") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "infundibular nucleus of medulla") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "infundibular periventricular nucleus of medulla") AnnotationAssertion(Annotation( "FMA:72609") "medial arcuate nucleus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "medulla arcuate hypothalamic nucleus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "medulla arcuate nucleus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "medulla arcuate nucleus of hypothalamus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "medulla arcuate nucleus-2") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "medulla arcuate periventricular nucleus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "medulla infundibular hypothalamic nucleus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "medulla infundibular nucleus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "medulla infundibular periventricular nucleus") AnnotationAssertion(Annotation( "BIRNLEX:2635") "nucleus arciformis pyramidalis") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BAMS:ArcM") "arcuate hypothalamic nucleus medial part") AnnotationAssertion(Annotation( "NeuroNames:775") "arcuate nucleus (medulla)") AnnotationAssertion(Annotation( "NeuroNames:775") "arcuate nucleus of the medulla") AnnotationAssertion(Annotation( "BAMS:ArcM") "arcuate nucleus, medial part") AnnotationAssertion(Annotation( "NeuroNames:775") Annotation( ) "nuclei arcuati") AnnotationAssertion(Annotation( "NeuroNames:775") Annotation( ) "nucleus arcuatus myelencephali") AnnotationAssertion(Annotation( "NeuroNames:775") Annotation( ) "nucleus arcuatus pyramidalis") AnnotationAssertion( "UBERON:0002865") AnnotationAssertion(rdfs:label "arcuate nucleus of medulla") SubClassOf( ) # Class: (caudal part of spinal trigeminal nucleus) AnnotationAssertion(Annotation( "BIRNLEX:2637") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "CSp5") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:CSp5") AnnotationAssertion( "BAMS:SPVC") AnnotationAssertion( "BAMS:Sp5C") AnnotationAssertion( "BIRNLEX:2637") AnnotationAssertion( "DHBA:12573") AnnotationAssertion( "FMA:72606") AnnotationAssertion( "MBA:429") AnnotationAssertion( "MESH:D014275") AnnotationAssertion(Annotation( "BIRNLEX:2637") "UMLS:C0040994") AnnotationAssertion(Annotation( "BIRNLEX:2637") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=771") AnnotationAssertion(Annotation( "BIRNLEX:2637") "caudal nucleus") AnnotationAssertion( "caudal nucleus (kandell)") AnnotationAssertion(Annotation( "FMA:72606") "spinal trigeminal nucleus, caudal part") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:771") "caudal part of the spinal trigeminal nucleus") AnnotationAssertion(Annotation( "NeuroNames:771") Annotation( ) "nucleus caudalis tractus spinalis nervi trigemini") AnnotationAssertion(Annotation( "NeuroNames:771") Annotation( ) "nucleus spinalis nervi trigemini, pars caudalis") AnnotationAssertion(Annotation( "BAMS:SPVC") "spinal nucleus of the trigeminal caudal part") AnnotationAssertion(Annotation( "BAMS:SPVC") "spinal nucleus of the trigeminal nerve caudal part") AnnotationAssertion(Annotation( "NeuroNames:771") "spinal nucleus of the trigeminal, caudal part") AnnotationAssertion(Annotation( "BAMS:Sp5C") "spinal trigeminal nucleus caudal part") AnnotationAssertion(Annotation( "NeuroNames:771") Annotation( ) "subnucleus caudalis") AnnotationAssertion( "UBERON:0002866") AnnotationAssertion(rdfs:label "caudal part of spinal trigeminal nucleus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (central gray substance of medulla) AnnotationAssertion(Annotation( "BIRNLEX:2638") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "CGM") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:CGM") AnnotationAssertion( "BIRNLEX:2638") AnnotationAssertion( "DHBA:146034986") AnnotationAssertion( "FMA:72595") AnnotationAssertion( "HBA:265504914") AnnotationAssertion(Annotation( "BIRNLEX:2638") "UMLS:C0262207") AnnotationAssertion(Annotation( "BIRNLEX:2638") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=756") AnnotationAssertion(Annotation( "BIRNLEX:2638") "central gray matter") AnnotationAssertion(Annotation( "FMA:72595") "medullary central gray substance") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:756") "central gray of the medulla") AnnotationAssertion(Annotation( "NeuroNames:756") "central gray substance of the medulla") AnnotationAssertion(Annotation( "NeuroNames:756") Annotation( ) "griseum periventriculare") AnnotationAssertion( "UBERON:0002867") AnnotationAssertion(rdfs:label "central gray substance of medulla") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (commissural nucleus of vagus nerve) AnnotationAssertion(Annotation( "BIRNLEX:2639") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "Cm10") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:Cm10") AnnotationAssertion( "BIRNLEX:2639") AnnotationAssertion( "FMA:54597") AnnotationAssertion(Annotation( "BIRNLEX:2639") "UMLS:C0175528") AnnotationAssertion(Annotation( "BIRNLEX:2639") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=754") AnnotationAssertion(Annotation( "FMA:54597") "commissural nucleus-1") AnnotationAssertion(Annotation( "FMA:54597") "nucleus of inferior commissure") AnnotationAssertion(Annotation( "BIRNLEX:2639") "nucleus of inferior commisure") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:754") "commissural nucleus of the vagus nerve") AnnotationAssertion(Annotation( "NeuroNames:754") Annotation( ) "nucleus commissuralis") AnnotationAssertion(Annotation( "NeuroNames:754") Annotation( ) "nucleus commissuralis nervi vagi") AnnotationAssertion( "UBERON:0002868") AnnotationAssertion(rdfs:label "commissural nucleus of vagus nerve") SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (diffuse reticular nucleus) AnnotationAssertion(Annotation( "BIRNLEX:2641") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "DRt") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:DRt") AnnotationAssertion( "BAMS:KF") AnnotationAssertion( "BIRNLEX:2641") AnnotationAssertion( "DHBA:12491") AnnotationAssertion( "DHBA:12518") AnnotationAssertion( "DMBA:16853") AnnotationAssertion( "FMA:72598") AnnotationAssertion( "FMA:77220") AnnotationAssertion(Annotation( "BIRNLEX:2641") "UMLS:C0175530") AnnotationAssertion(Annotation( "BIRNLEX:2641") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=760") AnnotationAssertion( "Koelliker-Fuse nucleus") AnnotationAssertion(Annotation( "BIRNLEX:2641") "Kolloker-Fuse nucleus") AnnotationAssertion( "Kölliker-Fuse nucleus") AnnotationAssertion(Annotation( "FMA:77220") "kolliker-Fuse nucleus") AnnotationAssertion( "nucleus of Kolliker-Fuse") AnnotationAssertion(Annotation( ) "nucleus subparabrachialis") AnnotationAssertion(Annotation( "FMA:77220") "subparabrachial nucleus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BAMS:KF") "Kolliker-Fuse nucleus") AnnotationAssertion(Annotation( "BAMS:KF") "Kolliker-Fuse subnucleus") AnnotationAssertion(Annotation( "NeuroNames:760") "kvlliker-Fuse subnucleus") AnnotationAssertion(Annotation( "NeuroNames:760") "kvlliker-Fuse subnucleus of parabrachial nucleus") AnnotationAssertion(Annotation( "NeuroNames:760") Annotation( ) "nucleus reticularis diffusus") AnnotationAssertion(Annotation( "NeuroNames:760") Annotation( ) "nucleus reticularis diffusus (Koelliker)") AnnotationAssertion( "UBERON:0002869") AnnotationAssertion(rdfs:label "diffuse reticular nucleus") SubClassOf( ) # Class: (dorsal motor nucleus of vagus nerve) AnnotationAssertion(Annotation( ) "A cranial nerve nucleus for the vagus nerve in the medulla that lies under the floor of the fourth ventricle. It mostly serves parasympathetic vagal functions in the gastrointestinal tract, lungs, and other thoracic and abdominal vagal innervations. The cell bodies for the preganglionic parasympathetic vagal neurons that innervate the heart reside in the nucleus ambiguus.[WP,unvetted].") AnnotationAssertion(Annotation( "FMA"^^xsd:string) "The FMA includes a separate sensoryt nucleus") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:10") AnnotationAssertion( "BAMS:DMX") AnnotationAssertion( "BIRNLEX:2642") AnnotationAssertion( "BM:DX") AnnotationAssertion( "CALOHA:TS-2381") AnnotationAssertion( "DHBA:12550") AnnotationAssertion( "EHDAA2:0004649") AnnotationAssertion( "EMAPA:35291") AnnotationAssertion( "EV:0100287") AnnotationAssertion( "FMA:54592") AnnotationAssertion( "HBA:9545") AnnotationAssertion( "MA:0001036") AnnotationAssertion( "MBA:839") AnnotationAssertion( "NCIT:C32475") AnnotationAssertion(Annotation( "BIRNLEX:2642") "UMLS:C0152401") AnnotationAssertion(Annotation( "ncithesaurus:Dorsal_Nucleus_of_the_Vagus_Nerve") "UMLS:C0926535") AnnotationAssertion(Annotation( "BIRNLEX:2642") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=755") AnnotationAssertion(Annotation( "FMA:54592") "dorsal efferent nucleus of vagus") AnnotationAssertion(Annotation( "DHBA:10N") "dorsal motor nucleus of the vagus (vagal nucleus)") AnnotationAssertion(Annotation( "MA:0001036") "dorsal motor nucleus of vagus X nerve") AnnotationAssertion(Annotation( "BIRNLEX:2642") "dorsal vagal nucleus") AnnotationAssertion(Annotation( "BIRNLEX:2642") "nucleus alaris") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:755") "dorsal motor nucleus") AnnotationAssertion(Annotation( ) "dorsal motor nucleus of the vagus") AnnotationAssertion(Annotation( ) "dorsal motor nucleus of the vagus nerve") AnnotationAssertion(Annotation( "BAMS:10") "dorsal motor nucleus of vagus") AnnotationAssertion(Annotation( ) "dorsal motor nucleus of vagus nerve") AnnotationAssertion(Annotation( ) "dorsal motor vagal nucleus") AnnotationAssertion(Annotation( ) "dorsal nucleus of the vagus nerve") AnnotationAssertion(Annotation( ) "dorsal nucleus of vagus nerve") AnnotationAssertion(Annotation( ) "dorsal vagal nucleus") AnnotationAssertion(Annotation( "NeuroNames:755") Annotation( ) "nucleus alaris (Oertel)") AnnotationAssertion(Annotation( "NeuroNames:755") Annotation( ) "nucleus dorsalis motorius nervi vagi") AnnotationAssertion(Annotation( "NeuroNames:755") Annotation( ) "nucleus dorsalis nervi vagi") AnnotationAssertion(Annotation( ) "nucleus posterior nervi vagi") AnnotationAssertion(Annotation( "NeuroNames:755") Annotation( ) "nucleus vagalis dorsalis") AnnotationAssertion(Annotation( ) "posterior nucleus of vagus nerve") AnnotationAssertion(Annotation( ) "vagus nucleus") AnnotationAssertion( "UBERON:0002870") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "dorsal motor nucleus of vagus nerve") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/8/82/Gray697.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "definitional"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (hypoglossal nucleus) AnnotationAssertion(Annotation( "BIRNLEX:2644") "Nucleus forming a longitudinal cell column in the medulla, close beneath the floor of the 4th ventricle, containing motor neurons that innervate the muscles of the tongue (Brodal, Neurological Anatomy, 3rd ed., 1981, pg 453).") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:12") AnnotationAssertion( "BAMS:12N") AnnotationAssertion( "BAMS:XII") AnnotationAssertion( "BIRNLEX:2644") AnnotationAssertion( "BM:XII") AnnotationAssertion( "DHBA:12545") AnnotationAssertion( "EHDAA2:0004635") AnnotationAssertion( "EMAPA:35416") AnnotationAssertion( "EV:0100286") AnnotationAssertion( "FMA:54505") AnnotationAssertion( "HBA:9557") AnnotationAssertion( "MA:0001039") AnnotationAssertion( "MBA:773") AnnotationAssertion( "NCIT:C12899") AnnotationAssertion(Annotation( "BIRNLEX:2644") "UMLS:C0228802") AnnotationAssertion(Annotation( "ncithesaurus:Hypoglossal_Nucleus") "UMLS:C0228802") AnnotationAssertion( "VHOG:0001358") AnnotationAssertion(Annotation( "BIRNLEX:2644") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=757") AnnotationAssertion( "ncithesaurus:Nucleus_of_the_Hypoglossal_Nerve") AnnotationAssertion(Annotation( "MA:0001039") "hypoglossal XII nucleus") AnnotationAssertion(Annotation( "FMA:54505") "hypoglossal nerve nucleus") AnnotationAssertion(Annotation( "FMA:54505") "hypoglossal nucleus") AnnotationAssertion(Annotation( "FMA:54505") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "nucleus nervi hypoglossi") AnnotationAssertion(Annotation( "FMA:54505") "nucleus of hypoglossal nerve") AnnotationAssertion(Annotation( "FMA:54505") "twelfth cranial nerve nucleus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:757") Annotation( ) "nucleus hypoglossalis") AnnotationAssertion(Annotation( ) Annotation( ) "nucleus nervi hypoglossi") AnnotationAssertion( "UBERON:0002871") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "hypoglossal nucleus") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/9/94/Gray694.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (inferior salivatory nucleus) AnnotationAssertion(Annotation( ) "In the brain, the inferior salivatory nucleus is a cluster of neurons controlling the parasympathetic input to the parotid gland. It is one of the components of the glossopharyngeal nerve. [WP,unvetted].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:IS") AnnotationAssertion( "BAMS:ISN") AnnotationAssertion( "BIRNLEX:2645") AnnotationAssertion( "DHBA:12544") AnnotationAssertion( "EHDAA2:0004641") AnnotationAssertion( "FMA:72601") AnnotationAssertion( "HBA:9569") AnnotationAssertion( "MBA:106") AnnotationAssertion(Annotation( "BIRNLEX:2645") "UMLS:C0175534") AnnotationAssertion(Annotation( "BIRNLEX:2645") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=764") AnnotationAssertion(Annotation( "GO:0021752") "inferior salivary nucleus") AnnotationAssertion( "inferior salivatary nucleus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:764") Annotation( ) "nucleus salivarius inferior") AnnotationAssertion(Annotation( "NeuroNames:764") Annotation( ) "nucleus salivatorius caudalis") AnnotationAssertion(Annotation( ) Annotation( ) "nucleus salivatorius inferior") AnnotationAssertion(Annotation( "NeuroNames:764") Annotation( ) "nucleus salivatorius inferior nervi glossopharyngei") AnnotationAssertion( "UBERON:0002872") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "inferior salivatory nucleus") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/a/a0/Gray843.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "definitional"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (interpolar part of spinal trigeminal nucleus) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:ISp5") AnnotationAssertion( "BAMS:SPVI") AnnotationAssertion( "BAMS:Sp5I") AnnotationAssertion( "BIRNLEX:2646") AnnotationAssertion( "DHBA:12578") AnnotationAssertion( "FMA:235324") AnnotationAssertion( "HBA:9678") AnnotationAssertion( "MBA:437") AnnotationAssertion(Annotation( "BIRNLEX:2646") "UMLS:C0175418") AnnotationAssertion(Annotation( "BIRNLEX:2646") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=817") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:817") "interpolar part of the spinal trigeminal nucleus") AnnotationAssertion(Annotation( "NeuroNames:817") Annotation( ) "nucleus interpolaris tractus spinalis nervi trigemini") AnnotationAssertion(Annotation( "NeuroNames:817") "nucleus of spinal tract of N. V (subnucleus interpolaris)") AnnotationAssertion(Annotation( "NeuroNames:817") Annotation( ) "nucleus spinalis nervi trigemini, pars interpolaris") AnnotationAssertion(Annotation( "BAMS:SPVI") "spinal nucleus of the trigeminal interpolar part") AnnotationAssertion(Annotation( "BAMS:SPVI") "spinal nucleus of the trigeminal nerve interpolar part") AnnotationAssertion(Annotation( "NeuroNames:817") "spinal nucleus of the trigeminal, interpolar part") AnnotationAssertion(Annotation( "NeuroNames:817") "spinal trigeminal nucleus, interpolar part") AnnotationAssertion( "UBERON:0002873") AnnotationAssertion(rdfs:label "interpolar part of spinal trigeminal nucleus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lateral pericuneate nucleus) AnnotationAssertion(Annotation( "BIRNLEX:2647") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "LPCu") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:LPCu") AnnotationAssertion( "BIRNLEX:2647") AnnotationAssertion( "DHBA:12526") AnnotationAssertion( "FMA:72604") AnnotationAssertion( "HBA:9581") AnnotationAssertion(Annotation( "BIRNLEX:2647") "UMLS:C0262271") AnnotationAssertion(Annotation( "BIRNLEX:2647") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=769") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:769") Annotation( ) "nucleus pericuneatus lateralis") AnnotationAssertion( "UBERON:0002874") AnnotationAssertion(rdfs:label "lateral pericuneate nucleus") SubClassOf( ) DisjointClasses(Annotation( "lexical"^^xsd:string) ) # Class: (medial pericuneate nucleus) AnnotationAssertion(Annotation( "BIRNLEX:2648") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "MPCu") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:MPCu") AnnotationAssertion( "BIRNLEX:2648") AnnotationAssertion( "DHBA:12527") AnnotationAssertion( "FMA:72605") AnnotationAssertion( "HBA:9584") AnnotationAssertion(Annotation( "BIRNLEX:2648") "UMLS:C0262288") AnnotationAssertion(Annotation( "BIRNLEX:2648") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=770") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:770") Annotation( ) "nucleus pericuneatus medialis") AnnotationAssertion( "UBERON:0002875") AnnotationAssertion(rdfs:label "medial pericuneate nucleus") SubClassOf( ) # Class: (nucleus intercalatus) AnnotationAssertion( "UBERON:0002878") AnnotationAssertion(Annotation( "BIRNLEX:2654") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "In") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:In") AnnotationAssertion( "BAMS:NIS") AnnotationAssertion( "BIRNLEX:2651") AnnotationAssertion( "BIRNLEX:2654") AnnotationAssertion( "DHBA:12612") AnnotationAssertion( "DMBA:16339") AnnotationAssertion( "EV:0100291") AnnotationAssertion( "FMA:72597") AnnotationAssertion( "HBA:9572") AnnotationAssertion( "MBA:161") AnnotationAssertion(Annotation( "BIRNLEX:2651") "UMLS:C0152398") AnnotationAssertion(Annotation( "BIRNLEX:2654") "UMLS:C0152398") AnnotationAssertion(Annotation( "BIRNLEX:2651") "UMLS:C1289504") AnnotationAssertion(Annotation( "BIRNLEX:2654") "UMLS:C1289504") AnnotationAssertion(Annotation( "BIRNLEX:2651") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=759") AnnotationAssertion(Annotation( "BIRNLEX:2654") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=759") AnnotationAssertion(Annotation( "FMA:72597") "intercalated nucleus of medulla") AnnotationAssertion(Annotation( "BIRNLEX:2651") "nucleus Staderini") AnnotationAssertion(Annotation( "BIRNLEX:2654") "nucleus Staderini") AnnotationAssertion(Annotation( "FMA:72597") "nucleus intercalatus of medulla") AnnotationAssertion( "nucleus of Staderini") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:759") "intercalated nucleus of the medulla") AnnotationAssertion(Annotation( "BAMS:NIS") "nucleus intercalates") AnnotationAssertion(Annotation( "NeuroNames:759") "nucleus intercalatus (Staderini)") AnnotationAssertion(Annotation( "NeuroNames:759") Annotation( ) "nucleus intercalatus (Staderini)") AnnotationAssertion( "UBERON:0002876") AnnotationAssertion(rdfs:comment "two NIF classes with the same name") AnnotationAssertion(rdfs:label "nucleus intercalatus") SubClassOf( ) # Class: (parasolitary nucleus) AnnotationAssertion(Annotation( "BIRNLEX:2653") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "PSol") AnnotationAssertion( ) AnnotationAssertion( "BAMS:PAS") AnnotationAssertion( "BAMS:PSol") AnnotationAssertion( "BIRNLEX:2653") AnnotationAssertion( "DHBA:12571") AnnotationAssertion( "FMA:77091") AnnotationAssertion( "MBA:859") AnnotationAssertion(Annotation( "BIRNLEX:2653") "OldNeuroNames:1639234958") AnnotationAssertion(Annotation( "BIRNLEX:2653") "nucleus fasciculus solitarius") AnnotationAssertion(Annotation( "BIRNLEX:2653") "nucleus juxtasolitarius") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002877") AnnotationAssertion(rdfs:label "parasolitary nucleus") SubClassOf( ) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (peritrigeminal nucleus) AnnotationAssertion(Annotation( "BIRNLEX:2655") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "Pe5") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:Pe5") AnnotationAssertion( "BIRNLEX:2655") AnnotationAssertion( "DHBA:12658") AnnotationAssertion( "FMA:72600") AnnotationAssertion( "HBA:9633") AnnotationAssertion(Annotation( "BIRNLEX:2655") "UMLS:C0262307") AnnotationAssertion(Annotation( "BIRNLEX:2655") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=762") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:762") Annotation( ) "nucleus peritrigeminalis") AnnotationAssertion( "UBERON:0002879") AnnotationAssertion(rdfs:label "peritrigeminal nucleus") SubClassOf( ) # Class: (pontobulbar nucleus) AnnotationAssertion(Annotation( "BIRNLEX:2656") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "PnB") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:PnB") AnnotationAssertion( "BIRNLEX:2656") AnnotationAssertion( "DHBA:12614") AnnotationAssertion( "FMA:72608") AnnotationAssertion( "HBA:9636") AnnotationAssertion(Annotation( "BIRNLEX:2656") "UMLS:C0175532") AnnotationAssertion(Annotation( "BIRNLEX:2656") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=774") AnnotationAssertion(Annotation( "FMA:72608") "nucleus of circumolivary bundle") AnnotationAssertion(Annotation( "FMA:72608") "pontobulbar body") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:774") Annotation( ) "corpus pontobulbare") AnnotationAssertion(Annotation( "NeuroNames:774") Annotation( ) "nucleus pontobulbaris") AnnotationAssertion( "UBERON:0002880") AnnotationAssertion(rdfs:label "pontobulbar nucleus") SubClassOf( ) # Class: (sublingual nucleus) AnnotationAssertion(Annotation( ) "In the substance of the formatio reticularis are two small nuclei of gray matter. The one near the dorsal aspect of the hilus of the inferior olivary nucleus is called the Sublingual nucleus (inferior central nucleus, nucleus of Roller.) [WP,unvetted].") AnnotationAssertion(Annotation( "BIRNLEX:2657") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "SLg") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:NR") AnnotationAssertion( "BAMS:Ro") AnnotationAssertion( "BAMS:SLg") AnnotationAssertion( "BIRNLEX:2657") AnnotationAssertion( "DHBA:12654") AnnotationAssertion( "FMA:68574") AnnotationAssertion( "HBA:9627") AnnotationAssertion( "MBA:177") AnnotationAssertion(Annotation( "BIRNLEX:2657") "UMLS:C0228552") AnnotationAssertion(Annotation( "BIRNLEX:2657") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=763") AnnotationAssertion( "Roller's nucleus") AnnotationAssertion(Annotation( "FMA:68574") "nucleus of roller") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "inferior central nucleus") AnnotationAssertion(Annotation( "NeuroNames:763") Annotation( ) "nucleus Roller") AnnotationAssertion(Annotation( ) "nucleus of roller") AnnotationAssertion(Annotation( "NeuroNames:763") Annotation( ) "nucleus parvocellularis nervi hypoglossi") AnnotationAssertion(Annotation( ) Annotation( ) "nucleus sublingualis") AnnotationAssertion( "UBERON:0002881") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "sublingual nucleus") SubClassOf( ) # Class: (supraspinal nucleus) AnnotationAssertion(Annotation( "BIRNLEX:2658") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "SSp") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:2658") AnnotationAssertion( "BM:SSp") AnnotationAssertion( "DHBA:12661") AnnotationAssertion( "EV:0100282") AnnotationAssertion( "FMA:74507") AnnotationAssertion( "HBA:9694") AnnotationAssertion(Annotation( "BIRNLEX:2658") "UMLS:C0175538") AnnotationAssertion(Annotation( "BIRNLEX:2658") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=776") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:776") Annotation( ) "nucleus substantiae grisea ventralis") AnnotationAssertion(Annotation( "NeuroNames:776") Annotation( ) "nucleus substantiae griseae ventralis") AnnotationAssertion(Annotation( "NeuroNames:776") Annotation( ) "nucleus supraspinalis") AnnotationAssertion( "UBERON:0002882") AnnotationAssertion(rdfs:label "supraspinal nucleus") SubClassOf( ) # Class: (central amygdaloid nucleus) AnnotationAssertion(Annotation( "BIRNLEX:2682") "The output region of the amygdala responsible for controlling responses (Phelps & LeDoux, 2005, http://www.ncbi.nlm.nih.gov/pubmed/ 16242399).") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:ACE") AnnotationAssertion( "BAMS:CEA") AnnotationAssertion( "BAMS:Ce") AnnotationAssertion( "BAMS:CeA") AnnotationAssertion( "BIRNLEX:2682") AnnotationAssertion( "BM:Tel-Am-ACE") AnnotationAssertion( "BTO:0002686") AnnotationAssertion( "DHBA:10363") AnnotationAssertion( "EMAPA:35204") AnnotationAssertion( "EV:0100191") AnnotationAssertion( "FMA:74047") AnnotationAssertion( "HBA:4359") AnnotationAssertion( "MA:0002923") AnnotationAssertion( "MBA:536") AnnotationAssertion( "PBA:10121") AnnotationAssertion(Annotation( "BIRNLEX:2682") "UMLS:C0175219") AnnotationAssertion( "XAO:0004542") AnnotationAssertion(Annotation( "BIRNLEX:2682") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=243") AnnotationAssertion(Annotation( "XAO:0004542") "central amygdala") AnnotationAssertion(Annotation( "BIRNLEX:2682") "central nucleus of amygda") AnnotationAssertion(Annotation( "FMA:74047") "central nucleus of amygdala") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0002686") "amygdala central nucleus") AnnotationAssertion( "central amygdala") AnnotationAssertion(Annotation( "NeuroNames:243") "central amygdalar nucleus") AnnotationAssertion(Annotation( "DHBA:10363") "central nuclear group") AnnotationAssertion(Annotation( "NeuroNames:243") "central nucleus amygdala") AnnotationAssertion(Annotation( "BAMS:CEA") "central nucleus of the amygdala") AnnotationAssertion(Annotation( "BTO:0002686") "nucleus amygdalae centralis") AnnotationAssertion(Annotation( "NeuroNames:243") Annotation( ) "nucleus amygdaloideus centralis") AnnotationAssertion(Annotation( "NeuroNames:243") Annotation( ) "nucleus centralis amygdalae") AnnotationAssertion( "UBERON:0002883") AnnotationAssertion(rdfs:label "central amygdaloid nucleus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (intercalated amygdaloid nuclei) AnnotationAssertion(Annotation( "BIRNLEX:2683") "Discrete clusters of cells intercalated among the major amygdaloid nuclei. They stain darkly in Nissl stains and have been identified in all mammals. The main groups lie between the lateral-basolateral nuclear coplex and the central and medial nuclei. Additional cell groups have been described by some in other locations (Millhouse, O. E. The intercalated cells of the amygdala. J Comp Neurol 247: 246-271, 1986)., Groups of cells located between the lateral basolateral amygaloid nuclear complex and the central nucleus of the amygdala. They stain darkly in Nissl stains and have been identified in all mammals. (Millhouse, O. E. The intercalated cells of the amygdala. J Comp Neurol 247: 246-271, 1986).") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:I") AnnotationAssertion( "BAMS:IA") AnnotationAssertion( "BIRNLEX:2683") AnnotationAssertion( "DHBA:10378") AnnotationAssertion( "DMBA:15876") AnnotationAssertion( "EMAPA:35434") AnnotationAssertion( "FMA:61868") AnnotationAssertion( "HBA:4375") AnnotationAssertion( "MA:0002925") AnnotationAssertion( "MBA:1105") AnnotationAssertion( "PBA:10132") AnnotationAssertion(Annotation( "BIRNLEX:2683") "UMLS:C0262259") AnnotationAssertion(Annotation( "BIRNLEX:2683") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=250") AnnotationAssertion(Annotation( "FMA:61868") "intercalated amygdaloid nuclei") AnnotationAssertion(Annotation( "FMA:61868") "intercalated amygdaloid nucleus") AnnotationAssertion(Annotation( "FMA:61868") "intercalated masses of nucleus amygdaloideus") AnnotationAssertion(Annotation( "FMA:61868") "intercalated nuclei of amygdala") AnnotationAssertion(Annotation( "BIRNLEX:2683") "intercalated nucleus of the amygdala") AnnotationAssertion(Annotation( "BIRNLEX:2683") "massa intercalata") AnnotationAssertion(Annotation( "BIRNLEX:2683") "massa intercalata of amygdala") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:250") "intercalated amygdalar nuclei") AnnotationAssertion(Annotation( "BAMS:IA") "intercalated amygdalar nucleus") AnnotationAssertion(Annotation( "BAMS:I") "intercalated cell islands") AnnotationAssertion(Annotation( "NeuroNames:250") "intercalated masses") AnnotationAssertion(Annotation( "NeuroNames:250") "intercalated nuclei amygdala") AnnotationAssertion(Annotation( "BAMS:I") "intercalated nuclei of the amygdala") AnnotationAssertion(Annotation( "BAMS:IA") "intercalated nuclei of the amygdala") AnnotationAssertion(Annotation( "NeuroNames:250") Annotation( ) "nucleus amygdalae intercalatus") AnnotationAssertion(Annotation( "NeuroNames:250") Annotation( ) "nucleus intercalatus amygdalae") AnnotationAssertion( "UBERON:0002884") AnnotationAssertion(rdfs:label "intercalated amygdaloid nuclei") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (accessory basal amygdaloid nucleus) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:ABA") AnnotationAssertion( "BAMS:BAM") AnnotationAssertion( "BIRNLEX:2686") AnnotationAssertion( "DHBA:10369") AnnotationAssertion( "FMA:61867") AnnotationAssertion( "HBA:4350") AnnotationAssertion(Annotation( "BIRNLEX:2686") "UMLS:C0175223") AnnotationAssertion(Annotation( "BIRNLEX:2686") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=249") AnnotationAssertion(Annotation( "BIRNLEX:2686") "accessory basal nucleus of amygdala") AnnotationAssertion(Annotation( "BIRNLEX:2686") "basal amygdaloid nucleus, medial part") AnnotationAssertion(Annotation( "DHBA:10369") "basomedial nucleus (accessory basal nucleus)") AnnotationAssertion(Annotation( "BIRNLEX:2686") "basomedial nucleus (de olmos)") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:249") "accessory basal nucleus") AnnotationAssertion(Annotation( "NeuroNames:249") "accessory basal nucleus of the amygdala") AnnotationAssertion(Annotation( "NeuroNames:249") "basomedial nucleus of amygdala") AnnotationAssertion(Annotation( "NeuroNames:249") "basomedial nucleus of the amygdala") AnnotationAssertion(Annotation( "BIRNLEX:2686") "medial principal nucleus") AnnotationAssertion(Annotation( "NeuroNames:249") Annotation( ) "nucleus amygdalae basalis accessorius") AnnotationAssertion(Annotation( "NeuroNames:249") Annotation( ) "nucleus amygdaloideus basalis, pars medialis") AnnotationAssertion(Annotation( "NeuroNames:249") Annotation( ) "nucleus amygdaloideus basomedialis") AnnotationAssertion(Annotation( "NeuroNames:249") Annotation( ) "nucleus basalis accessorius amygdalae") AnnotationAssertion( "UBERON:0002885") AnnotationAssertion(rdfs:label "accessory basal amygdaloid nucleus") SubClassOf( ) SubClassOf(Annotation( "NIFSTD"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (lateral amygdaloid nucleus) AnnotationAssertion(Annotation( "BIRNLEX:2687") "The sensory interface of the amygdala where plasticity is mediated (Phelps & LeDoux, 2005, http://www.ncbi.nlm.nih.gov/pubmed/ 16242399).") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:ALA") AnnotationAssertion( "BAMS:LA") AnnotationAssertion( "BAMS:La") AnnotationAssertion( "BIRNLEX:2687") AnnotationAssertion( "BM:Tel-Am-ALA") AnnotationAssertion( "BTO:0002704") AnnotationAssertion( "DHBA:10367") AnnotationAssertion( "DMBA:15944") AnnotationAssertion( "EMAPA:35476") AnnotationAssertion( "FMA:61866") AnnotationAssertion( "HBA:4378") AnnotationAssertion( "MA:0002926") AnnotationAssertion( "MBA:131") AnnotationAssertion( "PBA:10116") AnnotationAssertion(Annotation( "BIRNLEX:2687") "UMLS:C0175221") AnnotationAssertion(Annotation( "BIRNLEX:2687") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=245") AnnotationAssertion(Annotation( "FMA:61866") "lateral nucleus of amygdala") AnnotationAssertion(Annotation( "FMA:61866") "lateral principal nucleus of amygdala") AnnotationAssertion( "uberon") AnnotationAssertion( "lateral amygdala") AnnotationAssertion(Annotation( "NeuroNames:245") "lateral amygdalar nucleus") AnnotationAssertion(Annotation( "NeuroNames:245") "lateral nucleus of the amygdala") AnnotationAssertion(Annotation( "BIRNLEX:2687") "medial principal nucleus") AnnotationAssertion(Annotation( "BTO:0002704") "nucleus amygdalae lateralis") AnnotationAssertion(Annotation( "NeuroNames:245") Annotation( ) "nucleus amygdaloideus lateralis") AnnotationAssertion(Annotation( "NeuroNames:245") Annotation( ) "nucleus lateralis amygdalae") AnnotationAssertion( "UBERON:0002886") AnnotationAssertion(rdfs:label "lateral amygdaloid nucleus") SubClassOf( ) SubClassOf(Annotation( "NIFSTD"^^xsd:string) ObjectSomeValuesFrom( )) DisjointClasses(Annotation( "lexical"^^xsd:string) ) # Class: (basal amygdaloid nucleus) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:ABL") AnnotationAssertion( "BAMS:BL") AnnotationAssertion( "BAMS:BLA") AnnotationAssertion( "BIRNLEX:2692") AnnotationAssertion( "EMAPA:35167") AnnotationAssertion( "FMA:68855") AnnotationAssertion( "HBA:4341") AnnotationAssertion( "MA:0002921") AnnotationAssertion( "MBA:295") AnnotationAssertion(Annotation( "BIRNLEX:2692") "UMLS:C0175222") AnnotationAssertion(Annotation( "BIRNLEX:2692") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=246") AnnotationAssertion(Annotation( "BIRNLEX:2692") "basolateral amygaloid nucleus") AnnotationAssertion(Annotation( "BIRNLEX:2692") "basolateral amygdalar nucleus") AnnotationAssertion(Annotation( "FMA:68855") "basolateral amygdaloid nucleus") AnnotationAssertion( "basolateral nucleus (de olmos)") AnnotationAssertion(Annotation( "FMA:68855") "intermediate principal nucleus") AnnotationAssertion(Annotation( "FMA:68855") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "nucleus amygdalae basalis lateralis") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:246") "basal nucleus of the amygdala") AnnotationAssertion(Annotation( "NeuroNames:246") "basolateral nucleus of amygdala") AnnotationAssertion(Annotation( "NeuroNames:246") "basolateral nucleus of the amygdala") AnnotationAssertion(Annotation( "NeuroNames:246") Annotation( ) "nucleus amygdalae basalis") AnnotationAssertion(Annotation( "NeuroNames:246") Annotation( ) "nucleus amygdaloideus basalis") AnnotationAssertion(Annotation( "NeuroNames:246") Annotation( ) "nucleus amygdaloideus basolateralis") AnnotationAssertion(Annotation( "NeuroNames:246") Annotation( ) "nucleus basalis amygdalae") AnnotationAssertion( "UBERON:0002887") AnnotationAssertion(rdfs:label "basal amygdaloid nucleus") SubClassOf( ) SubClassOf(Annotation( "NIFSTD"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (lateral part of basal amygdaloid nucleus) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:BAL") AnnotationAssertion( "BIRNLEX:2695") AnnotationAssertion( "FMA:68857") AnnotationAssertion(Annotation( "BIRNLEX:2695") "UMLS:C0694601") AnnotationAssertion(Annotation( "BIRNLEX:2695") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=247") AnnotationAssertion(Annotation( "BIRNLEX:2695") "lateral basal nucleus of amygdala") AnnotationAssertion(Annotation( "FMA:68857") "lateral basal nucleus of the amygdala") AnnotationAssertion(Annotation( "BIRNLEX:2695") "lateral division of basal nucleus") AnnotationAssertion(Annotation( "FMA:68857") "lateral division of the basal nucleus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:247") "lateral part of the basal amygdalar nucleus") AnnotationAssertion(Annotation( "NeuroNames:247") "lateral part of the basolateral nucleus") AnnotationAssertion(Annotation( "NeuroNames:247") Annotation( ) "nucleus amygdalae basalis, pars lateralis") AnnotationAssertion(Annotation( "NeuroNames:247") Annotation( ) "nucleus amygdaloideus basalis, pars lateralis magnocellularis") AnnotationAssertion(Annotation( "NeuroNames:247") Annotation( ) "nucleus basalis lateralis amygdalae") AnnotationAssertion( "UBERON:0002888") AnnotationAssertion(rdfs:label "lateral part of basal amygdaloid nucleus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses(Annotation( "lexical"^^xsd:string) ) # Class: (medial part of basal amygdaloid nucleus) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:ABM") AnnotationAssertion( "BAMS:BM") AnnotationAssertion( "BAMS:BMA") AnnotationAssertion( "BIRNLEX:2696") AnnotationAssertion( "DMBA:15947") AnnotationAssertion( "EMAPA:35168") AnnotationAssertion( "FMA:68858") AnnotationAssertion( "MA:0002922") AnnotationAssertion( "MBA:319") AnnotationAssertion(Annotation( "BIRNLEX:2696") "UMLS:C1134422") AnnotationAssertion(Annotation( "BIRNLEX:2696") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=248") AnnotationAssertion(Annotation( "ABA:BMA") "basomedial amygdalar nucleus") AnnotationAssertion(Annotation( "FMA:68858") Annotation( "MA:0002922") "basomedial amygdaloid nucleus") AnnotationAssertion(Annotation( "FMA:68858") "medial basal nucleus of amygdala") AnnotationAssertion(Annotation( "FMA:68858") "medial division of basal nucleus") AnnotationAssertion(Annotation( "FMA:68858") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "nucleus amygdalae basalis medialis") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BAMS:BMA") "basomedial amygdaloid nucleus anterior part") AnnotationAssertion(Annotation( "BAMS:BMA") "basomedial amygdaloid nucleus anterior subdivision") AnnotationAssertion(Annotation( "BAMS:BMA") "basomedial amygdaloid nucleus, anterior part") AnnotationAssertion(Annotation( "NeuroNames:248") "medial part of the basal amygdalar nucleus") AnnotationAssertion(Annotation( "NeuroNames:248") "medial part of the basolateral nucleus") AnnotationAssertion(Annotation( "NeuroNames:248") Annotation( ) "nucleus amygdalae basalis, pars medialis") AnnotationAssertion(Annotation( "NeuroNames:248") Annotation( ) "nucleus amygdaloideus basalis pars lateralis parvocellularis") AnnotationAssertion(Annotation( "NeuroNames:248") Annotation( ) "nucleus basalis medialis amygdalae") AnnotationAssertion( "UBERON:0002889") AnnotationAssertion(rdfs:label "medial part of basal amygdaloid nucleus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (anterior amygdaloid area) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:AA") AnnotationAssertion( "BAMS:AAA") AnnotationAssertion( "BIRNLEX:2698") AnnotationAssertion( "BM:Tel-Am-AAA") AnnotationAssertion( "DHBA:10362") AnnotationAssertion( "DMBA:15994") AnnotationAssertion( "EMAPA:35127") AnnotationAssertion( "FMA:61861") AnnotationAssertion( "HBA:265504476") AnnotationAssertion( "MA:0002919") AnnotationAssertion( "MBA:23") AnnotationAssertion( "PBA:10103") AnnotationAssertion(Annotation( "BIRNLEX:2698") "UMLS:C0175215") AnnotationAssertion(Annotation( "BIRNLEX:2698") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=239") AnnotationAssertion(Annotation( "BIRNLEX:2698") "anterior amygaloid area") AnnotationAssertion(Annotation( "BIRNLEX:2698") "anterior amygdalar area") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BIRNLEX:2698") "anterior cortical nucleus") AnnotationAssertion(Annotation( "NeuroNames:239") Annotation( ) "area amydaliformis anterior") AnnotationAssertion(Annotation( "NeuroNames:239") Annotation( ) "area amygdaloidea anterior") AnnotationAssertion(Annotation( "NeuroNames:239") Annotation( ) "area anterior amygdalae") AnnotationAssertion( "UBERON:0002890") AnnotationAssertion(rdfs:label "anterior amygdaloid area") SubClassOf( ) SubClassOf(Annotation( "NIFSTD"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (cortical amygdaloid nucleus) AnnotationAssertion(Annotation( "BIRNLEX:2700") "Three layered structure that is located in the caudal aspect of the amygdala bordering the periamygdaloid cortex laterally.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:ACOP") AnnotationAssertion( "BAMS:PCo") AnnotationAssertion( "BIRNLEX:2700") AnnotationAssertion( "BTO:0002703") AnnotationAssertion( "EMAPA:35254") AnnotationAssertion( "EV:0100193") AnnotationAssertion( "FMA:61862") AnnotationAssertion( "MA:0002924") AnnotationAssertion( "MBA:631") AnnotationAssertion(Annotation( "BIRNLEX:2700") "UMLS:C0175216") AnnotationAssertion(Annotation( "BIRNLEX:2700") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=240") AnnotationAssertion(Annotation( "BIRNLEX:2700") "posterior cortical amygdaloid nucleus") AnnotationAssertion(Annotation( "FMA:61862") "posterior cortical nucleus of amygdala") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:240") Annotation( ) "cortex periamygdaloideus") AnnotationAssertion( "cortical amygdala") AnnotationAssertion(Annotation( "NeuroNames:240") "cortical amygdalar area") AnnotationAssertion(Annotation( "NeuroNames:240") "cortical amygdalar nucleus") AnnotationAssertion(Annotation( "BTO:0002703") "nucleus amygdalae corticalis") AnnotationAssertion(Annotation( "NeuroNames:240") Annotation( ) "nucleus corticalis amygdalae") AnnotationAssertion(Annotation( "NeuroNames:2640") "posterior cortical amygdalar nucleus") AnnotationAssertion(Annotation( "BAMS:ACOP") "posterior cortical nucleus of the amygdala") AnnotationAssertion(Annotation( "BAMS:Cop") "posterior cortical nucleus of the amygdala") AnnotationAssertion(Annotation( "NeuroNames:240") "ventral cortical amygdaloid nucleus") AnnotationAssertion(Annotation( "NeuroNames:240") "ventral cortical nucleus") AnnotationAssertion( "UBERON:0002891") AnnotationAssertion(rdfs:label "cortical amygdaloid nucleus") SubClassOf( ) SubClassOf(Annotation( "NIFSTD"^^xsd:string) ObjectSomeValuesFrom( )) DisjointClasses(Annotation( "lexical"^^xsd:string) ) # Class: (medial amygdaloid nucleus) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:MEA") AnnotationAssertion( "BAMS:Me") AnnotationAssertion( "BIRNLEX:2701") AnnotationAssertion( "BM:Tel-Am-AME") AnnotationAssertion( "BTO:0002702") AnnotationAssertion( "EMAPA:35543") AnnotationAssertion( "EV:0100192") AnnotationAssertion( "FMA:74046") AnnotationAssertion( "MA:0002927") AnnotationAssertion( "MBA:403") AnnotationAssertion(Annotation( "BIRNLEX:2701") "UMLS:C0175217") AnnotationAssertion(Annotation( "BIRNLEX:2701") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=241") AnnotationAssertion(Annotation( "BIRNLEX:2701") "medial amygalar nucleus") AnnotationAssertion(Annotation( "FMA:74046") "medial nucleus of amygdala") AnnotationAssertion( "uberon") AnnotationAssertion( "medial amygdala") AnnotationAssertion(Annotation( "NeuroNames:241") "medial amygdalar nucleus") AnnotationAssertion(Annotation( "BAMS:MeA") "medial amygdaloid nucleus principal part") AnnotationAssertion(Annotation( "BAMS:MEA") "medial nucleus of the amygdala") AnnotationAssertion(Annotation( "BTO:0002702") "nucleus amygdalae medialis") AnnotationAssertion(Annotation( "NeuroNames:241") Annotation( ) "nucleus amygdaloideus medialis") AnnotationAssertion(Annotation( "NeuroNames:241") Annotation( ) "nucleus medialis amygdalae") AnnotationAssertion( "UBERON:0002892") AnnotationAssertion(rdfs:label "medial amygdaloid nucleus") SubClassOf( ) SubClassOf(Annotation( "NIFSTD"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (nucleus of lateral olfactory tract) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:LOT") AnnotationAssertion( "BAMS:NLOT") AnnotationAssertion( "BIRNLEX:2702") AnnotationAssertion( "BM:Tel-NLOT") AnnotationAssertion( "DHBA:10309") AnnotationAssertion( "DMBA:15951") AnnotationAssertion( "EMAPA:35599") AnnotationAssertion( "FMA:61865") AnnotationAssertion( "HBA:4385") AnnotationAssertion( "MBA:619") AnnotationAssertion(Annotation( "BIRNLEX:2702") "UMLS:C0175218") AnnotationAssertion(Annotation( "BIRNLEX:2702") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=242") AnnotationAssertion(Annotation( ) "NLOT") AnnotationAssertion(Annotation( "FMA:61865") "lateral olfactory tract nucleus") AnnotationAssertion(Annotation( "BIRNLEX:2702") "nucleus of the lateral olfactory tract (ganser)") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:242") "nucleus of the lateral olfactory tract") AnnotationAssertion(Annotation( "BAMS:LOT") "nucleus of the olfactory tract") AnnotationAssertion(Annotation( "NeuroNames:242") Annotation( ) "nucleus of tractus olfactorius lateralis") AnnotationAssertion(Annotation( "NeuroNames:242") Annotation( ) "nucleus striae olfactoriae lateralis") AnnotationAssertion( "UBERON:0002893") AnnotationAssertion(rdfs:comment "part of amygdala in FMA but this leads to inconsistency when combined with ABA partitions") AnnotationAssertion(rdfs:label "nucleus of lateral olfactory tract") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (olfactory cortex) AnnotationAssertion(Annotation( "BIRNLEX:2707") "Aggregate brain region defined as those areas of cerebral cortex receiving direct synaptic input from the olfactory bulb (Price, 1973). It usually includes the piriform cortex and sometimes other areas.") AnnotationAssertion( "consider relationship: receives_input_from UBERON:0002264 olfactory bulb") AnnotationAssertion(Annotation( "BTO:0001446") "That portion of the cerebral cortex that, with the palaeocortex, develops in association with the olfactory system, and which is phylogenetically older than the neocortex and lacks its layered structure. The embryonic archaeocortex corresponds to the cortex of the dentate gyrus and hippocampus in mature mammals[BTO:0001446].") AnnotationAssertion(Annotation( "GO:0021989") "The olfactory cortex is involved in the perception of smell. It receives input from the olfactory bulb and is responsible for the identification of odors[GO][GO:0021989].") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000325") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "DOI:10.1111/j.1753-4887.2004.tb00097.x Buck LB, Olfactory receptors and odor coding in mammals. Nutrition Reviews (2008)") "(In mammals) Odorant detection is mediated by millions of olfactory sensory neurons located in the olfactory epithelium lining the nasal cavity. These neurons transmit sensory signals to the olfactory bulb of the brain, which in turn sends signals to the olfactory cortex.[well established][VHOG]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:OLF") AnnotationAssertion( "BIRNLEX:2707") AnnotationAssertion( "BTO:0001446") AnnotationAssertion( "EHDAA2:0001289") AnnotationAssertion( "EHDAA:5482") AnnotationAssertion( "EMAPA:17779") AnnotationAssertion( "FMA:276600") AnnotationAssertion( "HBA:265504406") AnnotationAssertion( "MA:0000193") AnnotationAssertion(Annotation( "BIRNLEX:2707") "UMLS:C0162434") AnnotationAssertion( "VHOG:0000325") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0001446") "archaeocortex") AnnotationAssertion(Annotation( "BTO:0001446") "archeocortex") AnnotationAssertion(Annotation( "BAMS:OLF") "olfactory areas") AnnotationAssertion(Annotation( "MA:0000193") "olfactory lobe") AnnotationAssertion( "UBERON:0002894") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "olfactory cortex") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "VHOG"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "MA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (secondary olfactory cortex) AnnotationAssertion(Annotation( "BIRNLEX:2709") "Brodmann's area 28; major gateway for neocortical input to the hippocampus; origin of the perforant pathway; a component of the medial temporal lobe memory system. (CSP) * The cytoarchitecturally well-defined area of multilaminate cerebral cortex on the medial aspect of the parahippocampal gyrus, immediately caudal to the olfactory cortex of the uncus. The entorhinal cortex is the origin of the major neural fiber system afferent to the hippocampus, the so-called PERFORANT PATHWAY. (Stedman, 25th ed).") AnnotationAssertion(Annotation( "FMA"^^xsd:string) "FMA considers this a syn of entorhinal cortex. See also brodman definition") AnnotationAssertion( ) AnnotationAssertion( "BAMS:Ent") AnnotationAssertion( "BIRNLEX:2709") AnnotationAssertion( "BTO:0004345") AnnotationAssertion( "EMAPA:35313") AnnotationAssertion( "EV:0100179") AnnotationAssertion( "MA:0003117") AnnotationAssertion(Annotation( "BIRNLEX:2709") "secondary olfactory areas") AnnotationAssertion(Annotation( "FMA:72356") "secondary olfactory cortex") AnnotationAssertion( "secondary olfactory cortical area (carpenter)") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:72356") Annotation( ) "entorhinal cortex") AnnotationAssertion( "UBERON:0002895") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "secondary olfactory cortex") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "NIF"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (telodiencephalic fissure) AnnotationAssertion(Annotation( "BIRNLEX:4001") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "TDF") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:tdf") AnnotationAssertion( "BIRNLEX:4001") AnnotationAssertion( "FMA:83726") AnnotationAssertion(Annotation( "BIRNLEX:4001") "UMLS:C0262340") AnnotationAssertion(Annotation( "BIRNLEX:4001") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=28") AnnotationAssertion(Annotation( "FMA:83726") "telo-diencephalic fissure") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:28") Annotation( ) "fissura telo-diencephalica") AnnotationAssertion( "UBERON:0002896") AnnotationAssertion(rdfs:label "telodiencephalic fissure") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (cistern of lamina terminalis) AnnotationAssertion(Annotation( "BIRNLEX:4002") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "CISLT") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:cislt") AnnotationAssertion( "BIRNLEX:4002") AnnotationAssertion( "FMA:74516") AnnotationAssertion( "NCIT:C32922") AnnotationAssertion(Annotation( "BIRNLEX:4002") "UMLS:C0228153") AnnotationAssertion(Annotation( "ncithesaurus:Lamina_Terminalis_Cistern") "UMLS:C0228153") AnnotationAssertion(Annotation( "BIRNLEX:4002") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=29") AnnotationAssertion(Annotation( "BIRNLEX:4002") "cisterna lamina terminalis") AnnotationAssertion(Annotation( "FMA:74516") "lamina terminalis cistern") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:29") "cistern of the lamina terminalis") AnnotationAssertion(Annotation( "NeuroNames:29") Annotation( ) "cisterna laminae terminalis") AnnotationAssertion( "UBERON:0002897") AnnotationAssertion(rdfs:label "cistern of lamina terminalis") SubClassOf( ) # Class: (chiasmatic cistern) AnnotationAssertion(Annotation( "ISBN:0-683-40008-8"^^xsd:string) Annotation( "MP:0009028") "The region of the subarachnoid space that is located below and anterior to the optic chiasm.") AnnotationAssertion(Annotation( "BIRNLEX:4003") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "CCIS") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:ccis") AnnotationAssertion( "BIRNLEX:4003") AnnotationAssertion( "EMAPA:19057") AnnotationAssertion( "FMA:74515") AnnotationAssertion( "NCIT:C32304") AnnotationAssertion(Annotation( "BIRNLEX:4003") "UMLS:C0228152") AnnotationAssertion(Annotation( "ncithesaurus:Chiasmatic_Cistern") "UMLS:C0228152") AnnotationAssertion(Annotation( "BIRNLEX:4003") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=30") AnnotationAssertion(Annotation( "BIRNLEX:4003") "cisterna chiasmatica") AnnotationAssertion(Annotation( "BIRNLEX:4003") "cisterna chiasmatis") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "cisterna chiasmatica") AnnotationAssertion( "UBERON:0002898") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "chiasmatic cistern") SubClassOf( ) # Class: (hippocampal sulcus) AnnotationAssertion(Annotation( ) "The hippocampal sulcus, also known as the hippocampal fissure, is a sulcus that separates the dentate gyrus from the subiculum and the CA1 field in the hippocampus. [WP,unvetted].") AnnotationAssertion(Annotation( "ncit"^^xsd:string) "two classes in ncit (in general ncit distinguishes between fissure and sulcus, whereas FMA treats these as exact synonyms)") AnnotationAssertion(Annotation( "BIRNLEX:4004") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "HIS") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:hf") AnnotationAssertion( "BAMS:his") AnnotationAssertion( "BIRNLEX:4004") AnnotationAssertion( "DHBA:10619") AnnotationAssertion( "EMAPA:36471") AnnotationAssertion( "FMA:83747") AnnotationAssertion( "HBA:9394") AnnotationAssertion( "MBA:1063") AnnotationAssertion( "NCIT:C32743") AnnotationAssertion(Annotation( "BIRNLEX:4004") "UMLS:C0228251") AnnotationAssertion(Annotation( "ncithesaurus:Hippocampal_Fissure") "UMLS:C0228251") AnnotationAssertion(Annotation( "BIRNLEX:4004") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=42") AnnotationAssertion(Annotation( "FMA:83747") "dentate fissure") AnnotationAssertion(Annotation( "FMA:83747") "hippocampal fissure") AnnotationAssertion(Annotation( "BIRNLEX:4004") "sulcus hippocampi") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:42") "hippocampal fissure (Gratiolet)") AnnotationAssertion(Annotation( ) Annotation( ) "sulcus hippocampalis") AnnotationAssertion(Annotation( ) Annotation( ) "sulcus hippocampi") AnnotationAssertion( "UBERON:0002899") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "hippocampal sulcus") AnnotationAssertion( "Hippocampus:(brain).jpg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (transverse occipital sulcus) AnnotationAssertion(Annotation( ) "The transverse occipital sulcus is a structure in the occipital lobe. The transverse occipital sulcus is continuous with the posterior end of the occipital ramus of the intraparietal sulcus, and runs across the upper part of the lobe, a short distance behind the parietoC6ccipital fissure.") AnnotationAssertion(Annotation( "BIRNLEX:4013") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "TOCS") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:tocs") AnnotationAssertion( "BIRNLEX:4013") AnnotationAssertion( "BTO:0003786") AnnotationAssertion( "DHBA:13228") AnnotationAssertion( "FMA:83786") AnnotationAssertion( "HBA:9388") AnnotationAssertion(Annotation( "BIRNLEX:4013") "UMLS:C0262348") AnnotationAssertion(Annotation( "BIRNLEX:4013") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=145") AnnotationAssertion(Annotation( "BIRNLEX:4013") "sulcus occipitalis transversus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002900") AnnotationAssertion(rdfs:label "transverse occipital sulcus") SubClassOf( ) # Class: (posterior calcarine sulcus) AnnotationAssertion(Annotation( "BIRNLEX:4015") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "PCCS") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:pccs") AnnotationAssertion( "BIRNLEX:4015") AnnotationAssertion( "DHBA:10285") AnnotationAssertion( "FMA:83787") AnnotationAssertion(Annotation( "BIRNLEX:4015") "UMLS:C0262311") AnnotationAssertion(Annotation( "BIRNLEX:4015") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=149") AnnotationAssertion(Annotation( "FMA:83787") "postcalcarine sulcus") AnnotationAssertion(Annotation( "FMA:83787") "posterior calcarine fissure") AnnotationAssertion(Annotation( "FMA:83787") "posterior part of calcarine sulcus") AnnotationAssertion(Annotation( "BIRNLEX:4015") "sulcus calcarinus posterior") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002901") AnnotationAssertion(rdfs:label "posterior calcarine sulcus") SubClassOf( ) # Class: (occipital pole) AnnotationAssertion(Annotation( ) "The anterior end of the hemisphere is named the frontal pole. The posterior end is named the occipital pole. The anterior end of the temporal lobe, the temporal pole. [WP,unvetted].") AnnotationAssertion(Annotation( "BIRNLEX:4016") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "OCP") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:OCP") AnnotationAssertion( "BAMS:OcP") AnnotationAssertion( "BAMS:ocp") AnnotationAssertion( "BIRNLEX:4016") AnnotationAssertion( "BTO:0001868") AnnotationAssertion( "DHBA:12149") AnnotationAssertion( "FMA:74892") AnnotationAssertion( "HBA:4181") AnnotationAssertion(Annotation( "BIRNLEX:4016") "UMLS:C0228217") AnnotationAssertion(Annotation( "BIRNLEX:4016") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=141") AnnotationAssertion(Annotation( "BIRNLEX:4016") Annotation( ) "polus occipitalis") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0001868") "polus occipitalis cerebri") AnnotationAssertion( "UBERON:0002902") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "occipital pole") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/e/e3/Human_brain_lateral_view_description.JPG"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "BTO"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (lunate sulcus) AnnotationAssertion(Annotation( ) "The lunate sulcus is a structure in the occipital lobe. It is not present in all individuals.") AnnotationAssertion(Annotation( "BIRNLEX:4017") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "LUS") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:lus") AnnotationAssertion( "BIRNLEX:4017") AnnotationAssertion( "BM:Tel-Cx-LUS") AnnotationAssertion( "DHBA:146034812") AnnotationAssertion( "FMA:83788") AnnotationAssertion( "HBA:9390") AnnotationAssertion( "NCIT:C33019") AnnotationAssertion(Annotation( "BIRNLEX:4017") "UMLS:C0262278") AnnotationAssertion(Annotation( "ncithesaurus:Lunate_Sulcus") "UMLS:C0262278") AnnotationAssertion(Annotation( "BIRNLEX:4017") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=150") AnnotationAssertion(Annotation( "FMA:83788") "lunate fissure") AnnotationAssertion(Annotation( "BIRNLEX:4017") "sulcus lunatus") AnnotationAssertion(Annotation( "BIRNLEX:4017") "sulcus simialis") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002903") AnnotationAssertion(rdfs:label "lunate sulcus") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ) # Class: (lateral occipital sulcus) AnnotationAssertion(Annotation( ) "In the occipital lobe, the lateral occipital sulcus extends from behind forward, and divides the lateral surface of the occipital lobe into a superior and an inferior gyrus, which are continuous in front with the parietal and temporal lobes. [WP,unvetted].") AnnotationAssertion(Annotation( "BIRNLEX:4018") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "LOCS") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:locs") AnnotationAssertion( "BIRNLEX:4018") AnnotationAssertion( "FMA:83785") AnnotationAssertion( "HBA:9389") AnnotationAssertion( "NCIT:C32952") AnnotationAssertion(Annotation( "BIRNLEX:4018") "UMLS:C0228229") AnnotationAssertion(Annotation( "ncithesaurus:Lateral-occipital_Sulcus") "UMLS:C0228229") AnnotationAssertion(Annotation( "BIRNLEX:4018") "UMLS:C1289641") AnnotationAssertion(Annotation( "BIRNLEX:4018") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=143") AnnotationAssertion(Annotation( "BIRNLEX:4018") "sulcus occipitalis lateralis") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:143") "lateral occipital sulcus (H)") AnnotationAssertion( "UBERON:0002904") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "lateral occipital sulcus") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/2/2c/Gray727_lateral-occipital_sulcus.svg"^^xsd:anyURI) SubClassOf( ) # Class: (intralingual sulcus) AnnotationAssertion(Annotation( ) "A groove located within the boundaries of the lingual gyrus in the human. Identified by dissection, it is oriented parallel to the inferior margin of the occipital lobe ( Ono-1990; Duvernoy-1992 ).") AnnotationAssertion( "It is not found in the macaque or in the smooth cerebral cortex of the rat or mouse ( NeuroNames )") AnnotationAssertion(Annotation( "BIRNLEX:4019") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "ILS") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:ils") AnnotationAssertion( "BIRNLEX:4019") AnnotationAssertion( "FMA:83789") AnnotationAssertion( "HBA:9397") AnnotationAssertion(Annotation( "BIRNLEX:4019") "UMLS:C0694595") AnnotationAssertion(Annotation( "BIRNLEX:4019") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=151") AnnotationAssertion(Annotation( "BIRNLEX:4019") "sulcus intralingualis") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002905") AnnotationAssertion(rdfs:label "intralingual sulcus") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ) SubClassOf(Annotation( "cjm"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (anterior occipital sulcus) AnnotationAssertion(Annotation( "BIRNLEX:4023") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "AOCS") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:aocs") AnnotationAssertion( "BIRNLEX:4023") AnnotationAssertion( "DHBA:146034784") AnnotationAssertion( "FMA:75758") AnnotationAssertion( "HBA:9385") AnnotationAssertion(Annotation( "BIRNLEX:4023") "UMLS:C0262194") AnnotationAssertion(Annotation( "BIRNLEX:4023") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=142") AnnotationAssertion(Annotation( "BIRNLEX:4023") "ascending limb of the inferior temporal sulcus") AnnotationAssertion(Annotation( "BIRNLEX:4023") "posterior inferior temporal sulcus") AnnotationAssertion(Annotation( "BIRNLEX:4023") "sulci occipitales superiores") AnnotationAssertion(Annotation( "BIRNLEX:4023") "sulcus annectans") AnnotationAssertion(Annotation( "BIRNLEX:4023") "sulcus occipitalis anterior") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002906") AnnotationAssertion(rdfs:label "anterior occipital sulcus") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ) # Class: (superior postcentral sulcus) AnnotationAssertion(Annotation( "BIRNLEX:4025") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "SPCS") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:spcs") AnnotationAssertion( "BIRNLEX:4025") AnnotationAssertion( "DHBA:10215") AnnotationAssertion( "FMA:83775") AnnotationAssertion(Annotation( "BIRNLEX:4025") "UMLS:C0262337") AnnotationAssertion(Annotation( "BIRNLEX:4025") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=100") AnnotationAssertion(Annotation( "FMA:83775") "postcentral dimple") AnnotationAssertion(Annotation( "BIRNLEX:4025") "sulcus postcentralis superior") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:100") "postcentral sulcus (Peele)") AnnotationAssertion( "UBERON:0002907") AnnotationAssertion(rdfs:label "superior postcentral sulcus") SubClassOf( ) # Class: (subparietal sulcus) AnnotationAssertion(Annotation( "BIRNLEX:4026") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "SBPS") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:sbps") AnnotationAssertion( "BIRNLEX:4026") AnnotationAssertion( "BM:Tel-Cx-SPS") AnnotationAssertion( "FMA:83777") AnnotationAssertion( "HBA:9376") AnnotationAssertion(Annotation( "BIRNLEX:4026") "UMLS:C0228216") AnnotationAssertion(Annotation( "BIRNLEX:4026") "UMLS:C1281079") AnnotationAssertion(Annotation( "BIRNLEX:4026") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=102") AnnotationAssertion(Annotation( "FMA:83777") "splenial sulcus") AnnotationAssertion(Annotation( "BIRNLEX:4026") "sulcus subparietalis") AnnotationAssertion(Annotation( "FMA:83777") "suprasplenial sulcus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002908") AnnotationAssertion(rdfs:label "subparietal sulcus") SubClassOf( ) # Class: (posterior subcentral sulcus) AnnotationAssertion(Annotation( "BIRNLEX:4027") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "PSCS") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:pscs") AnnotationAssertion( "BIRNLEX:4027") AnnotationAssertion( "FMA:83778") AnnotationAssertion(Annotation( "BIRNLEX:4027") "UMLS:C0262318") AnnotationAssertion(Annotation( "BIRNLEX:4027") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=103") AnnotationAssertion(Annotation( "BIRNLEX:4027") "sulcus subcentralis posterior") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002909") AnnotationAssertion(rdfs:label "posterior subcentral sulcus") SubClassOf( ) # Class: (posterior ascending limb of lateral sulcus) AnnotationAssertion(Annotation( "NeuroNames:104") "One of two branches of the lateral fissure at its posterior terminus identified by dissection in the human. The other is the terminal descending limb of the lateral fissure ( Ono-1990 ). It is not found in the macaque ( Martin-2000 ), the rat ( Swanson-2004 ) or the mouse ( Hof-2000 ).") AnnotationAssertion(Annotation( "BIRNLEX:4028") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "PALS") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:pals") AnnotationAssertion( "BIRNLEX:4028") AnnotationAssertion( "FMA:83761") AnnotationAssertion(Annotation( "BIRNLEX:4028") "UMLS:C0262310") AnnotationAssertion(Annotation( "BIRNLEX:4028") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=104") AnnotationAssertion( "ascending terminal ramus of sylvian fissure") AnnotationAssertion(Annotation( "FMA:83761") "posterior ascending limb of lateral fissure") AnnotationAssertion(Annotation( "FMA:83761") "posterior ramus of lateral cerebral sulcus") AnnotationAssertion(Annotation( "BIRNLEX:4028") "ramus posterior ascendens fissurae lateralis") AnnotationAssertion(Annotation( "FMA:83761") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "ramus posterior sulci lateralis cerebri") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:104") Annotation( ) "sulcus lateralis, ramus posterior") AnnotationAssertion(Annotation( "NeuroNames:104") "terminal ascending limb of sylvian fissure") AnnotationAssertion(Annotation( "NeuroNames:104") "terminal ascending limb of the lateral fissure") AnnotationAssertion( "UBERON:0002910") AnnotationAssertion(rdfs:label "posterior ascending limb of lateral sulcus") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf(Annotation( "NIFSTD"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (parietal operculum) AnnotationAssertion(Annotation( ) "The parietal operculum, forming the superior bank of the sylvian fissure, as studied in the cat, contains the secondary somatosensory representation, 'S-II', and a second somatotopic representation (parietal ventral, or PV). Anatomically, primate S-II receives inputs from area 3 and area 1, and projects to PV and area 7. PV has projections to area 5 and premotor areas. [WP,unvetted].") AnnotationAssertion(Annotation( "BIRNLEX:4029") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "PAO") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:PaOp") AnnotationAssertion( "BAMS:pao") AnnotationAssertion( "BIRNLEX:4029") AnnotationAssertion( "DHBA:13230") AnnotationAssertion( "FMA:74889") AnnotationAssertion(Annotation( "BIRNLEX:4029") "UMLS:C0228265") AnnotationAssertion(Annotation( "BIRNLEX:4029") "UMLS:C1284612") AnnotationAssertion(Annotation( "BIRNLEX:4029") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=96") AnnotationAssertion(Annotation( "BIRNLEX:4029") Annotation( ) "operculum parietale") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002911") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "parietal operculum") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/b/b3/Operculum.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (marginal sulcus) AnnotationAssertion(Annotation( ) "The marginal sulcus is the portion of the cingulate sulcus adjacent to the paracentral lobule and the precuneus. It is sometimes known as the 'marginal part of the cingulate sulcus'. [WP,unvetted].") AnnotationAssertion(Annotation( "BIRNLEX:4030") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "MS") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:4030") AnnotationAssertion( "FMA:83773") AnnotationAssertion(Annotation( "BIRNLEX:4030") "UMLS:C0259792") AnnotationAssertion(Annotation( "BIRNLEX:4030") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=98") AnnotationAssertion(Annotation( "FMA:83773") "marginal branch of cingulate sulcus") AnnotationAssertion(Annotation( "FMA:83773") "marginal ramus of cingulate sulcus") AnnotationAssertion(Annotation( "BIRNLEX:4030") "ramus marginalis sulci cingulati") AnnotationAssertion(Annotation( "FMA:83773") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "ramus marginalis sulci cinguli") AnnotationAssertion(Annotation( "FMA:83773") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "sulcus marginalis") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:98") Annotation( ) "pars marginalis sulci cinguli") AnnotationAssertion(Annotation( ) Annotation( ) "ramus marginalis; sulcus marginalis") AnnotationAssertion( "UBERON:0002912") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "marginal sulcus") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/d/d0/Gray727_marginal_sulcus.svg"^^xsd:anyURI) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (intraparietal sulcus) AnnotationAssertion(Annotation( ) "The intraparietal sulcus (IPS) is located on the lateral surface of the parietal lobe, and consists of an oblique and a horizontal portion. The IPS contains a series of functionally distinct subregions that have been intensively investigated using both single cell neurophysiology in primates and human functional neuroimaging. Its principal functions are related to perceptual-motor coordination (for directing eye movements and reaching) and visual attention. The IPS is also thought to play a role in other functions, including processing symbolic numerical information, visuospatial working memory and interpreting the intent of others. [WP,unvetted].") AnnotationAssertion(Annotation( "BIRNLEX:4031") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "ITPS") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:ips") AnnotationAssertion( "BAMS:itps") AnnotationAssertion( "BIRNLEX:4031") AnnotationAssertion( "BM:Tel-Cx-IPS") AnnotationAssertion( "BTO:0003787") AnnotationAssertion( "DHBA:10620") AnnotationAssertion( "FMA:83772") AnnotationAssertion( "HBA:9372") AnnotationAssertion( "NCIT:C32879") AnnotationAssertion(Annotation( "BIRNLEX:4031") "UMLS:C0228213") AnnotationAssertion(Annotation( "ncithesaurus:Intraparietal_Sulcus") "UMLS:C0228213") AnnotationAssertion(Annotation( "BIRNLEX:4031") "UMLS:C1281069") AnnotationAssertion(Annotation( "BIRNLEX:4031") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=97") AnnotationAssertion(Annotation( "FMA:83772") "interparietal fissure") AnnotationAssertion(Annotation( "FMA:83772") "intraparietal fissure") AnnotationAssertion(Annotation( "BIRNLEX:4031") "sulcus interparietalis") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0003787") "Turner sulcus") AnnotationAssertion(Annotation( "BTO:0003787") "intraparietal sulcus of Turner") AnnotationAssertion(Annotation( ) Annotation( ) "sulcus intraparietalis") AnnotationAssertion(Annotation( "BTO:0003787") "sulcus intraparietalis") AnnotationAssertion( "UBERON:0002913") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "intraparietal sulcus") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/2/2a/Gray726_intraparietal_sulcus.svg"^^xsd:anyURI) SubClassOf( ) # Class: (inferior postcentral sulcus) AnnotationAssertion(Annotation( "BIRNLEX:4032") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "IPCS") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:ipcs") AnnotationAssertion( "BAMS:poci") AnnotationAssertion( "BIRNLEX:4032") AnnotationAssertion( "FMA:83776") AnnotationAssertion(Annotation( "BIRNLEX:4032") "UMLS:C0262256") AnnotationAssertion(Annotation( "BIRNLEX:4032") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=101") AnnotationAssertion(Annotation( "BIRNLEX:4032") "sulcus postcentralis inferior") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002914") AnnotationAssertion(rdfs:label "inferior postcentral sulcus") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (postcentral sulcus of parietal lobe) AnnotationAssertion(Annotation( ) "The postcentral sulcus of the parietal lobe lies parallel to, and behind, the central sulcus in the human brain. (A sulcus is one of the prominent grooves on the surface of the brain. ) The postcentral sulcus divides the postcentral gyrus from the remainder of the parietal lobe. [WP,unvetted].") AnnotationAssertion(Annotation( "BIRNLEX:4033") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "POCS") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:pocs") AnnotationAssertion( "BIRNLEX:4033") AnnotationAssertion( "BM:Tel-Cx-PoCS") AnnotationAssertion( "DHBA:10627") AnnotationAssertion( "FMA:83774") AnnotationAssertion( "HBA:9371") AnnotationAssertion( "NCIT:C33347") AnnotationAssertion(Annotation( "BIRNLEX:4033") "UMLS:C0228212") AnnotationAssertion(Annotation( "ncithesaurus:Postcentral_Sulcus") "UMLS:C0228212") AnnotationAssertion(Annotation( "BIRNLEX:4033") "UMLS:C1281070") AnnotationAssertion(Annotation( "BIRNLEX:4033") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=99") AnnotationAssertion(Annotation( "FMA:83774") "postcentral fissure of cerebral hemisphere") AnnotationAssertion(Annotation( "FMA:83774") "postcentral fissure-1") AnnotationAssertion(Annotation( "FMA:83774") "postcentral sulcus") AnnotationAssertion(Annotation( "BIRNLEX:4033") "structure of postcentral sulcus") AnnotationAssertion(Annotation( "BIRNLEX:4033") "sulcus postcentralis") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "sulcus postcentralis") AnnotationAssertion( "UBERON:0002915") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "postcentral sulcus of parietal lobe") AnnotationAssertion( "Postcentral:sulcus.png"^^xsd:anyURI) SubClassOf( ) # Class: (central sulcus) AnnotationAssertion(Annotation( ) "The central sulcus is a fold in the cerebral cortex of brains in vertebrates. Also called the central fissure, it was originally called the fissure of Rolando or the Rolandic fissure, after Luigi Rolando. The central sulcus is a prominent landmark of the brain, separating the parietal lobe from the frontal lobe and the primary motor cortex from the primary somatosensory cortex. [WP,unvetted].") AnnotationAssertion(Annotation( "BIRNLEX:4035") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "CS") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:cs") AnnotationAssertion( "BIRNLEX:4035") AnnotationAssertion( "BM:Tel-Cx-CS") AnnotationAssertion( "DHBA:10614") AnnotationAssertion( "FMA:83752") AnnotationAssertion( "HBA:9403") AnnotationAssertion( "NCIT:C32280") AnnotationAssertion( "OpenCyc:Mx4rvjMKxpwpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "BIRNLEX:4035") "UMLS:C0228188") AnnotationAssertion(Annotation( "ncithesaurus:Central_Sulcus_of_Rolando") "UMLS:C0228188") AnnotationAssertion(Annotation( "BIRNLEX:4035") "UMLS:C1281071") AnnotationAssertion(Annotation( "BIRNLEX:4035") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=48") AnnotationAssertion(Annotation( "FMA:83752") "central cerebral sulcus") AnnotationAssertion(Annotation( "FMA:83752") "central fissure") AnnotationAssertion( "central sulcus of Rolando") AnnotationAssertion( "fissure of Rolando") AnnotationAssertion(Annotation( "BIRNLEX:4035") "rolandic fissure") AnnotationAssertion(Annotation( "BIRNLEX:4035") "sulcus centralis") AnnotationAssertion(Annotation( "BIRNLEX:4035") "sulcus centralis (rolandi)") AnnotationAssertion(Annotation( ) Annotation( ) "sulcus centralis cerebri") AnnotationAssertion(Annotation( "BIRNLEX:4035") "sulcus centralis cerebri") AnnotationAssertion( "sulcus of Rolando") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002916") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "central sulcus") AnnotationAssertion( "Central:sulcus.png"^^xsd:anyURI) AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/8/8e/Gray726_central_sulcus.svg"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "NIFSTD"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete regional part of inferior colliculus) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A regional part of brain that is part of a inferior colliculus [Automatically generated definition].") AnnotationAssertion( "BIRNLEX:4036") AnnotationAssertion( "FMA:77871") AnnotationAssertion(Annotation( "FMA:77871") "inferior colliculus segment") AnnotationAssertion(Annotation( "BIRNLEX:4036") "segment of inferior colliculus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002917") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "obsolete regional part of inferior colliculus") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (medial parabrachial nucleus) AnnotationAssertion(Annotation( ) "The Medial parabrachial nucleus is a nucleus of the pons which constitutes part of the pneumotaxic center. It gets its name from its location relative to the superior cerebellar peduncles, which is also known as the 'brachia conjunctiva'. [WP,unvetted].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:MPB") AnnotationAssertion( "BIRNLEX:4038") AnnotationAssertion( "DHBA:12487") AnnotationAssertion( "DMBA:16850") AnnotationAssertion( "FMA:72480") AnnotationAssertion( "HBA:9153") AnnotationAssertion( "MBA:890") AnnotationAssertion(Annotation( "BIRNLEX:4038") "UMLS:C0175446") AnnotationAssertion(Annotation( "BIRNLEX:4038") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=587") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "nucleus parabrachialis medialis") AnnotationAssertion(Annotation( "NeuroNames:587") "parabrachial nucleus, medial division") AnnotationAssertion(Annotation( "NeuroNames:587") "parabrachial nucleus, medial part") AnnotationAssertion( "UBERON:0002918") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "medial parabrachial nucleus") SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) DisjointClasses(Annotation( "lexical"^^xsd:string) ) # Class: (anterior parolfactory sulcus) AnnotationAssertion(Annotation( "BIRNLEX:4039") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "APS") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:aps") AnnotationAssertion( "BIRNLEX:4039") AnnotationAssertion( "DHBA:146034824") AnnotationAssertion( "FMA:83744") AnnotationAssertion(Annotation( "BIRNLEX:4039") "UMLS:C0262196") AnnotationAssertion(Annotation( "BIRNLEX:4039") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=37") AnnotationAssertion(Annotation( "BIRNLEX:4039") Annotation( ) "paraolfactory sulci") AnnotationAssertion(Annotation( "FMA:83744") "paraolfactory sulcus") AnnotationAssertion(Annotation( "BIRNLEX:4039") "sulcus parolfactorius anterior") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002919") AnnotationAssertion(rdfs:label "anterior parolfactory sulcus") SubClassOf(Annotation( "FMA"^^xsd:string) ) DisjointClasses(Annotation( "lexical"^^xsd:string) ) # Class: (callosal sulcus) AnnotationAssertion(Annotation( ) "The callosal sulcus is a sulcus in the brain between the cingulate gyrus and corpus callosum, below the longitudinal cerebral fissure. [WP,unvetted].") AnnotationAssertion(Annotation( "BIRNLEX:4040") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "CAS") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:cas") AnnotationAssertion( "BIRNLEX:4040") AnnotationAssertion( "DHBA:10613") AnnotationAssertion( "FMA:83743") AnnotationAssertion( "HBA:9404") AnnotationAssertion(Annotation( "BIRNLEX:4040") "UMLS:C0262204") AnnotationAssertion(Annotation( "BIRNLEX:4040") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=36") AnnotationAssertion(Annotation( "BIRNLEX:4040") "sulcus corporis callosi") AnnotationAssertion(Annotation( "FMA:83743") "sulcus of corpus callosum") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "sulcus corporis callosi") AnnotationAssertion( "UBERON:0002920") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "callosal sulcus") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/4/43/Gray727_sulcus_of_the_corpus_callosum.svg"^^xsd:anyURI) SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (longitudinal fissure) AnnotationAssertion(Annotation( ) "The deep groove which separates the two hemispheres of the vertebrate brain. The falx cerebri, a dural brain covering, lies within the medial longitudinal fissure. [WP,unvetted].") AnnotationAssertion(Annotation( "BIRNLEX:4041") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "LF") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:lf") AnnotationAssertion( "BAMS:lfh") AnnotationAssertion( "BIRNLEX:4041") AnnotationAssertion( "DHBA:10622") AnnotationAssertion( "FMA:83727") AnnotationAssertion( "HBA:9401") AnnotationAssertion( "NCIT:C33005") AnnotationAssertion( "OpenCyc:Mx4rwJlWu5wpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "BIRNLEX:4041") "UMLS:C0228186") AnnotationAssertion(Annotation( "ncithesaurus:Longitudinal_Fissure") "UMLS:C0228186") AnnotationAssertion(Annotation( "BIRNLEX:4041") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=35") AnnotationAssertion(Annotation( "BIRNLEX:4041") "fissura interhemispherica") AnnotationAssertion(Annotation( "BIRNLEX:4041") "fissura longitudinalis cerebrales") AnnotationAssertion(Annotation( "BIRNLEX:4041") "fissura longitudinalis cerebri") AnnotationAssertion(Annotation( "BIRNLEX:4041") "fissura longitudinalis magna") AnnotationAssertion(Annotation( "FMA:83727") "hemispheric sulcus") AnnotationAssertion(Annotation( "FMA:83727") "interhemispheric fissure") AnnotationAssertion(Annotation( "FMA:83727") "longitudinal cerebral fissure") AnnotationAssertion(Annotation( "BIRNLEX:4041") "longitudinal fissure of hemisphere") AnnotationAssertion(Annotation( "BIRNLEX:4041") "longitudinal fissure of the cerebrum") AnnotationAssertion(Annotation( "FMA:83727") "longitudinal sulcus") AnnotationAssertion(Annotation( "FMA:83727") "medial longitudinal fissure") AnnotationAssertion(Annotation( "FMA:83727") "sagittal fissure") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002921") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "longitudinal fissure") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/9/92/Hemispheres.png"^^xsd:anyURI) SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (olfactory trigone) AnnotationAssertion(Annotation( "BIRNLEX:4042") "A small triangular area in front of the anterior perforated substance. Its apex, directed forward, occupies the posterior part of the olfactory sulcus, and is brought into view by throwing back the olfactory tract (adapted from Wikipedia).") AnnotationAssertion(Annotation( "BIRNLEX:4042") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "OLT") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:OTr") AnnotationAssertion( "BAMS:olt") AnnotationAssertion( "BIRNLEX:4042") AnnotationAssertion( "FMA:74883") AnnotationAssertion( "NCIT:C33813") AnnotationAssertion(Annotation( "BIRNLEX:4042") "UMLS:C0228279") AnnotationAssertion(Annotation( "ncithesaurus:Trigonum_Olfactorium") "UMLS:C0228279") AnnotationAssertion(Annotation( "BIRNLEX:4042") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=34") AnnotationAssertion(Annotation( "BIRNLEX:4042") "trigonum olfactorium") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "trigonum olfactorium") AnnotationAssertion( "UBERON:0002922") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "olfactory trigone") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/4/4d/Gray732.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "BTO-def") ObjectSomeValuesFrom( )) # Class: (posterior parolfactory sulcus) AnnotationAssertion(Annotation( "BIRNLEX:4043") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "PPOS") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:ppos") AnnotationAssertion( "BAMS:pps") AnnotationAssertion( "BIRNLEX:4043") AnnotationAssertion( "DHBA:146034828") AnnotationAssertion( "FMA:83745") AnnotationAssertion( "HBA:9369") AnnotationAssertion(Annotation( "BIRNLEX:4043") "UMLS:C0262316") AnnotationAssertion(Annotation( "BIRNLEX:4043") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=38") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:38") Annotation( ) "sulcus parolfactorius posterior") AnnotationAssertion( "UBERON:0002923") AnnotationAssertion(rdfs:label "posterior parolfactory sulcus") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (terminal nerve) AnnotationAssertion(Annotation( ) Annotation( ) Annotation( "ZFIN:ZDB-PUB-041202-1") "The terminal nerve, located anterior to cranial nerve I, is comprised of a group of cells with somata adjacent to the olfactory bulb and processes that extend anteriorly to the olfactory epithelium and posteriorly to the telencephalon. In teleost fish an additional group of axons extends along the optic tract and delivers putative neuromodulators to the retina. It is thought to develop from cranial neural crest.") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0001356") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "The terminal nerve, located anterior to cranial nerve I, is comprised of a group of cells with somata adjacent to the olfactory bulb and processes that extend anteriorly to the olfactory epithelium and posteriorly to the telencephalon. In teleost fish an additional group of axons extends along the optic tract and delivers putative neuromodulators to the retina. It is thought to develop from cranial neural crest. Whitlock 2004. Also see Grens, Greenwood and Fernald, Brain Behav Evol 2005; 66(1):1-9.[TAO]") AnnotationAssertion(Annotation( "BIRNLEX:4044") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "TRN") AnnotationAssertion(Annotation( "ISBN:0471888893"^^xsd:string) "terminalis") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:tn") AnnotationAssertion( "BAMS:trn") AnnotationAssertion( "BIRNLEX:4044") AnnotationAssertion( "EFO:0003678") AnnotationAssertion( "MBA:885") AnnotationAssertion( "TAO:0001356") AnnotationAssertion(Annotation( "BIRNLEX:4044") "UMLS:C0262346") AnnotationAssertion(Annotation( "BIRNLEX:4044") "UMLS:C1185749") AnnotationAssertion( "ZFA:0001356") AnnotationAssertion(Annotation( "BIRNLEX:4044") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=33") AnnotationAssertion(Annotation( ) "cranial nerve 0") AnnotationAssertion(Annotation( ) "cranial nerve zero") AnnotationAssertion(Annotation( "ZFA:0001356") "nervus terminalis") AnnotationAssertion(Annotation( "ISBN:0471888893"^^xsd:string) "terminalis nerve") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002924") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "http://www.ncbi.nlm.nih.gov/pubmed/2286018 state: 'The presence of an additional cranial nerve (the nervus terminalis or cranial nerve zero) is well documented in many non-human vertebrate species. However, its existence in the adult human has been disputed. The present study focused on the structure and incidence of this nerve in the adult human brain. The nerve was examined post-mortem in 10 adult brains using dissection microscopy, light microscopy, transmission electron microscopy, and immunohistochemistry. In all specimens, the nervus terminalis was identified bilaterally as a microscopic plexus of unmyelinated peripheral nerve fascicles in the subarachnoid space covering the gyrus rectus of the orbital surface of the frontal lobes. The plexus appeared in the region of the cribriform plate of the ethmoid and coursed posteriorly to the vicinity of the olfactory trigone, medial olfactory gyrus, and lamina terminalis. We conclude that the terminal nerve is a common finding in the adult human brain, confirming early light microscopic reports.'") AnnotationAssertion(rdfs:label "terminal nerve") SubClassOf(Annotation( "ZFA"^^xsd:string) ) SubClassOf(Annotation( "ISBN:0471888893"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "ISBN:0471888893"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (trigeminal nucleus) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A nucleus of brain that is part of a trigeminal nuclear complex.") AnnotationAssertion(Annotation( "GO") Annotation( "https://github.com/obophenotype/mouse-anatomy-ontology/issues/58") "massive inconsistencies between GO, MA, wikipedia. Part of pons in MA, but this leads to inconsistencies with ABA.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BM:V") AnnotationAssertion( "BTO:0001074") AnnotationAssertion( "CALOHA:TS-2077") AnnotationAssertion( "EMAPA:35883") AnnotationAssertion( "EV:0100271") AnnotationAssertion( "FMA:71247") AnnotationAssertion( "GAID:604") AnnotationAssertion( "MA:0001028") AnnotationAssertion( "MESH:D014278") AnnotationAssertion( "NCIT:C12807") AnnotationAssertion(Annotation( "ncithesaurus:Trigeminal_Nucleus") "UMLS:C0040999") AnnotationAssertion( "VHOG:0001353") AnnotationAssertion(Annotation( "FMA:71247") "nucleus of trigeminal nuclear complex") AnnotationAssertion(Annotation( "MA:0001028") "trigeminal V nucleus") AnnotationAssertion(Annotation( "FMA:71247") "trigeminal nuclear complex nucleus") AnnotationAssertion(Annotation( "FMA:71248") "trigeminal nucleus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0001074") "nucleus mesencephalicus nervi trigemini") AnnotationAssertion(Annotation( "BTO:0001074") "nucleus mesencephalicus trigeminalis") AnnotationAssertion(Annotation( "BTO:0001074") "nucleus tractus mesencephali nervi trigeminalis") AnnotationAssertion( "UBERON:0002925") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "trigeminal nucleus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (gustatory epithelium) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A sensory epithelium that is part of a gustatory system.") AnnotationAssertion( ) AnnotationAssertion( "FMA:62412") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002926") AnnotationAssertion(rdfs:label "gustatory epithelium") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "NIFSTD"^^xsd:string) ObjectSomeValuesFrom( )) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (dentate gyrus polymorphic layer) AnnotationAssertion(Annotation( ) Annotation( "PMCID:PMC2492885") "A cellular layer of the dentate gyrus enclosed by the granule cell layer. A number of cell types are located in the polymorphic layer but the most prominent is the mossy cell.") AnnotationAssertion( "TODO: add mossy cell") AnnotationAssertion( ) AnnotationAssertion( "BAMS:PoDG") AnnotationAssertion( "BAMS:po") AnnotationAssertion( "BIRNLEX:4128") AnnotationAssertion( "EMAPA:35280") AnnotationAssertion( "MA:0002864") AnnotationAssertion( "MBA:10704") AnnotationAssertion( "NLX:42439") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "CA4") AnnotationAssertion(Annotation( "BAMS:PoDG") "polymorph layer of the dentate gyrus") AnnotationAssertion( "UBERON:0002928") AnnotationAssertion(rdfs:label "dentate gyrus polymorphic layer") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (dentate gyrus pyramidal layer) AnnotationAssertion( "existence of this layer is dubious, added for consistency with MA") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37515") AnnotationAssertion( "MA:0000948") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002929") AnnotationAssertion(rdfs:label "dentate gyrus pyramidal layer") SubClassOf( ) # Class: (tectopontine tract) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:701") AnnotationAssertion( "DHBA:12364") AnnotationAssertion( "FMA:72505") AnnotationAssertion(Annotation( "BIRNLEX:701") "UMLS:C0228403") AnnotationAssertion(Annotation( "BIRNLEX:701") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=612") AnnotationAssertion(Annotation( "FMA:72505") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "fibrae tectopontinae") AnnotationAssertion(Annotation( "FMA:72505") "tectopontine fibers") AnnotationAssertion(Annotation( "FMA:72505") "tectopontine fibres") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:612") Annotation( ) "tractus tectopontinus") AnnotationAssertion( "UBERON:0002930") AnnotationAssertion(rdfs:label "tectopontine tract") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (dorsal septal nucleus) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:DS") AnnotationAssertion( "BIRNLEX:704") AnnotationAssertion( "FMA:61877") AnnotationAssertion(Annotation( "BIRNLEX:704") "UMLS:C0262226") AnnotationAssertion(Annotation( "BIRNLEX:704") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=260") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:260") Annotation( ) "nucleus dorsalis septi") AnnotationAssertion(Annotation( "NeuroNames:260") Annotation( ) "nucleus septalis dorsalis") AnnotationAssertion( "UBERON:0002931") AnnotationAssertion(rdfs:label "dorsal septal nucleus") SubClassOf( ) SubClassOf(Annotation( "NIFSTD"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (trapezoid body) AnnotationAssertion(Annotation( "BIRNLEX:707") "Bundles of axons traversing the pontine tegmentum oriented in the mediolateral direction. These fibers are related to the auditory pathway. Nuclei are embedded within these fibers.") AnnotationAssertion(Annotation( "BIRNLEX:707") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "TZ") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:TB") AnnotationAssertion( "BAMS:tb") AnnotationAssertion( "BAMS:tz") AnnotationAssertion( "BIRNLEX:707") AnnotationAssertion( "BM:TB") AnnotationAssertion( "DHBA:12796") AnnotationAssertion( "FMA:72487") AnnotationAssertion( "HBA:9197") AnnotationAssertion( "MBA:841") AnnotationAssertion(Annotation( "BIRNLEX:707") "UMLS:C0152379") AnnotationAssertion(Annotation( "BIRNLEX:707") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=594") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:594") Annotation( ) "corpus trapezoides") AnnotationAssertion(Annotation( ) Annotation( ) "corpus trapezoideum") AnnotationAssertion(Annotation( "NeuroNames:594") "trapezoid body (Treviranus)") AnnotationAssertion( "UBERON:0002932") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "trapezoid body") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/b/bb/Gray760.png"^^xsd:anyURI) SubClassOf( ) # Class: (nucleus of anterior commissure) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:AC") AnnotationAssertion( "BAMS:ACN") AnnotationAssertion( "BAMS:AGN") AnnotationAssertion( "BAMS:BAC") AnnotationAssertion( "BIRNLEX:712") AnnotationAssertion( "BM:Tel-ACN") AnnotationAssertion( "DMBA:15794") AnnotationAssertion( "FMA:61883") AnnotationAssertion( "HBA:4312") AnnotationAssertion( "MBA:287") AnnotationAssertion(Annotation( "BIRNLEX:712") "UMLS:C0262292") AnnotationAssertion(Annotation( "BIRNLEX:712") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=266") AnnotationAssertion(Annotation( "FMA:61883") "anterior commissure nucleus") AnnotationAssertion(Annotation( "FMA:61883") "bed nucleus of anterior commissure") AnnotationAssertion(Annotation( "FMA:61883") "nucleus of commissura anterior") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BAMS:AC") "anterior commissural nucleus") AnnotationAssertion(Annotation( "NeuroNames:266") "bed nucleus of the anterior commissure") AnnotationAssertion(Annotation( "NeuroNames:266") Annotation( ) "nucleus commissurae anterior") AnnotationAssertion(Annotation( "NeuroNames:266") Annotation( ) "nucleus commissurae anterioris") AnnotationAssertion(Annotation( "NeuroNames:266") Annotation( ) "nucleus interstitialis commissurae anterior") AnnotationAssertion(Annotation( "NeuroNames:266") "nucleus of the anterior commissure") AnnotationAssertion( "UBERON:0002933") AnnotationAssertion(rdfs:label "nucleus of anterior commissure") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (ventral oculomotor nucleus) AnnotationAssertion(Annotation( "BIRNLEX:713") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "V3") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:713") AnnotationAssertion( "DHBA:12205") AnnotationAssertion( "FMA:72422") AnnotationAssertion( "HBA:9038") AnnotationAssertion(Annotation( "BIRNLEX:713") "UMLS:C0175380") AnnotationAssertion(Annotation( "BIRNLEX:713") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=496") AnnotationAssertion(Annotation( ) "ventral nucleus of oculomotor nuclear complex") AnnotationAssertion(Annotation( "FMA:72422") "ventral oculomotor cell column") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:496") Annotation( ) "nucleus nervi oculomotorii ventrolateralis") AnnotationAssertion(Annotation( "NeuroNames:496") Annotation( ) "nucleus nervi oculomotorii, pars ventralis") AnnotationAssertion( "UBERON:0002934") AnnotationAssertion(rdfs:label "ventral oculomotor nucleus") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "NIFSTD"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (magnocellular part of ventral anterior nucleus) AnnotationAssertion(Annotation( "BIRNLEX:716") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "VAMC") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:VAMC") AnnotationAssertion( "BIRNLEX:716") AnnotationAssertion( "BM:Die-Th-VA-VAmc") AnnotationAssertion( "DHBA:10419") AnnotationAssertion( "FMA:62192") AnnotationAssertion( "HBA:4420") AnnotationAssertion(Annotation( "BIRNLEX:716") "UMLS:C0228335") AnnotationAssertion(Annotation( "BIRNLEX:716") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=336") AnnotationAssertion(Annotation( "FMA:62192") "magnocellular division of ventral anterior nucleus of thalamus") AnnotationAssertion(Annotation( "BIRNLEX:716") "magnocellular ventral anterior nucleus") AnnotationAssertion(Annotation( "BIRNLEX:716") "nucleus lateropolaris (magnocellularis)") AnnotationAssertion(Annotation( "BIRNLEX:716") "nucleus lateropolaris magnocellularis (hassler)") AnnotationAssertion(Annotation( "BIRNLEX:716") "nucleus rostralis lateralis situs perifascicularis") AnnotationAssertion(Annotation( "BIRNLEX:716") "nucleus thalamicus ventral anterior, pars magnocellularis") AnnotationAssertion(Annotation( "BIRNLEX:716") "nucleus ventralis anterior, pars magnocellularis") AnnotationAssertion(Annotation( "FMA:62192") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "pars magnocellularis nuclei ventralis anterior thalami") AnnotationAssertion(Annotation( "FMA:62192") "ventral anterior nucleus, magnocellular part") AnnotationAssertion(Annotation( "FMA:62192") "ventral anterior nucleus, pars magnocellularis") AnnotationAssertion(Annotation( "FMA:62192") "ventral anterior thalamic nucleus, magnocellular part") AnnotationAssertion(Annotation( "BIRNLEX:716") "ventroanterior thalamic nucleus, magnocellular part") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:336") "magnocellular part of the ventral anterior nucleus") AnnotationAssertion(Annotation( "NeuroNames:336") Annotation( ) "nucleus thalamicus ventralis anterior, pars magnocellularis") AnnotationAssertion( "UBERON:0002935") AnnotationAssertion(rdfs:label "magnocellular part of ventral anterior nucleus") SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (magnocellular part of red nucleus) AnnotationAssertion(Annotation( ) "The magnocellular red nucleus (RNm) is located in the rostral midbrain and is involved in motor coordination. Together with the parvocellular red nucleus, it makes up the red nucleus.") AnnotationAssertion(Annotation( "BIRNLEX:720") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "RMC") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:RMC") AnnotationAssertion( "BAMS:RNmc") AnnotationAssertion( "BIRNLEX:720") AnnotationAssertion( "DHBA:12249") AnnotationAssertion( "DMBA:16737") AnnotationAssertion( "FMA:72431") AnnotationAssertion( "HBA:9055") AnnotationAssertion(Annotation( "BIRNLEX:720") "UMLS:C0175402") AnnotationAssertion(Annotation( "BIRNLEX:720") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=507") AnnotationAssertion(Annotation( "FMA:72431") "paleoruber") AnnotationAssertion(Annotation( "FMA:72431") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "pars magnocellularis nuclei rubri") AnnotationAssertion(Annotation( "FMA:72431") "red nucleus, magnocellular part") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:507") "magnocellular part of the red nucleus") AnnotationAssertion(Annotation( "NeuroNames:507") Annotation( ) "nucleus ruber magnocellularis") AnnotationAssertion(Annotation( "NeuroNames:507") Annotation( ) "nucleus ruber, pars magnocellularis") AnnotationAssertion(Annotation( "NeuroNames:507") Annotation( ) "palaeorubrum") AnnotationAssertion(Annotation( "NeuroNames:507") Annotation( ) "pars magnocellularis (ruber)") AnnotationAssertion(Annotation( "BAMS:RMC") "red nucleus magnocellular part") AnnotationAssertion(Annotation( "BAMS:RNmc") "red nucleus magnocellular part") AnnotationAssertion( "UBERON:0002936") AnnotationAssertion(rdfs:label "magnocellular part of red nucleus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (parvicellular part of ventral anterior nucleus) AnnotationAssertion(Annotation( "BIRNLEX:722") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "VAPC") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:VAPC") AnnotationAssertion( "BIRNLEX:722") AnnotationAssertion( "FMA:62191") AnnotationAssertion(Annotation( "BIRNLEX:722") "UMLS:C0228334") AnnotationAssertion(Annotation( "BIRNLEX:722") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=335") AnnotationAssertion(Annotation( "BIRNLEX:722") "nucleus ventralis anterior (dewulf)") AnnotationAssertion(Annotation( "BIRNLEX:722") "nucleus ventralis anterior, pars parvicellularis") AnnotationAssertion(Annotation( "FMA:62191") "ventral anterior nucleus, pars parvicellularis") AnnotationAssertion(Annotation( "FMA:62191") "ventral anterior thalamic nucleus, parvicellular part") AnnotationAssertion( "ventralis anterior (jones)") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:335") Annotation( ) "nucleus ventralis anterior, pars parvocellularis") AnnotationAssertion(Annotation( "NeuroNames:335") "parvicellular part of the ventral anterior nucleus") AnnotationAssertion( "UBERON:0002937") AnnotationAssertion(rdfs:label "parvicellular part of ventral anterior nucleus") SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (parvocellular part of red nucleus) AnnotationAssertion(Annotation( ) "The parvocellular red nucleus (RNp) is located in the rostral midbrain and is involved in motor coordination. Together with the magnocellular red nucleus, it makes up the red nucleus.") AnnotationAssertion(Annotation( "BIRNLEX:725") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "RPC") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:RNpc") AnnotationAssertion( "BAMS:RPC") AnnotationAssertion( "BIRNLEX:725") AnnotationAssertion( "DHBA:12250") AnnotationAssertion( "DMBA:16633") AnnotationAssertion( "FMA:72430") AnnotationAssertion( "HBA:9056") AnnotationAssertion(Annotation( "BIRNLEX:725") "UMLS:C0175401") AnnotationAssertion(Annotation( "BIRNLEX:725") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=506") AnnotationAssertion(Annotation( "FMA:72430") "neoruber") AnnotationAssertion(Annotation( "FMA:72430") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "pars parvocellularis nuclei rubri") AnnotationAssertion(Annotation( "FMA:72430") "red nucleus, parvocellular part") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:506") Annotation( ) "neorubrum") AnnotationAssertion(Annotation( "NeuroNames:506") Annotation( ) "nucleus ruber parvocellularis") AnnotationAssertion(Annotation( "NeuroNames:506") Annotation( ) "nucleus ruber, pars parvocellularis") AnnotationAssertion(Annotation( "NeuroNames:506") Annotation( ) "pars parvocellularis (ruber)") AnnotationAssertion(Annotation( "NeuroNames:506") "parvocellular part of the red nucleus") AnnotationAssertion(Annotation( "BAMS:RNpc") "red nucleus parvicellular part") AnnotationAssertion(Annotation( "NeuroNames:506") "red nucleus, parvicellular part") AnnotationAssertion( "UBERON:0002938") AnnotationAssertion(rdfs:label "parvocellular part of red nucleus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (ventral posteroinferior nucleus) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:VP") AnnotationAssertion( "BAMS:VPI") AnnotationAssertion( "BIRNLEX:728") AnnotationAssertion( "BM:Die-Th-VPI") AnnotationAssertion( "BTO:0002464") AnnotationAssertion( "BTO:0004373") AnnotationAssertion( "BTO:0004374") AnnotationAssertion( "DHBA:10426") AnnotationAssertion( "EMAPA:35912") AnnotationAssertion( "EV:0100209") AnnotationAssertion( "FMA:62199") AnnotationAssertion( "HBA:4426") AnnotationAssertion( "MA:0000867") AnnotationAssertion(Annotation( "FMA:62199") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "nucleus ventralis posterior inferior thalami") AnnotationAssertion(Annotation( "FMA:62199") "ventral posterior inferior nucleus") AnnotationAssertion(Annotation( "FMA:62199") "ventral posterior inferior nucleus of thalamus") AnnotationAssertion(Annotation( "FMA:62199") "ventral posterior inferior thalamic nucleus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0004373") Annotation( ) "VPN") AnnotationAssertion(Annotation( "BTO:0002464") "nuclei ventrales posteriores thalami") AnnotationAssertion(Annotation( "BTO:0002464") "nuclei ventrobasales thalami") AnnotationAssertion(Annotation( "BAMS:VP") "ventral posterior") AnnotationAssertion(Annotation( "BAMS:VP") "ventral posterior complex of the thalamus") AnnotationAssertion(Annotation( "BAMS:VPI") "ventral posterior inferior nucleus of dorsal thalamus") AnnotationAssertion(Annotation( "BTO:0002464") "ventral posterior nuclei of thalamus") AnnotationAssertion(Annotation( "BTO:0002464") "ventral posterior nucleus of thalamus") AnnotationAssertion(Annotation( "BAMS:VPI") "ventral posterolateral thalamic nucleus, inferior part") AnnotationAssertion(Annotation( "BTO:0004374") "ventroposterior inferior nucleus") AnnotationAssertion(Annotation( "BAMS:VPI") "ventroposterior inferior thalamic") AnnotationAssertion(Annotation( "BTO:0004373") "ventroposterior nucleus") AnnotationAssertion(Annotation( "BAMS:VP") "ventroposterior nucleus of thalamus") AnnotationAssertion( "UBERON:0002939") AnnotationAssertion(rdfs:label "ventral posteroinferior nucleus") SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (anterior column of fornix) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:afx") AnnotationAssertion( "BIRNLEX:731") AnnotationAssertion( "FMA:61966") AnnotationAssertion( "HBA:9251") AnnotationAssertion(Annotation( "BIRNLEX:731") "UMLS:C0175236") AnnotationAssertion(Annotation( "FMA:61966") "anterior crus of fornix") AnnotationAssertion(Annotation( "FMA:61966") "anterior pillar of fornix") AnnotationAssertion(Annotation( "FMA:61966") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "columna fornicis anterior") AnnotationAssertion(Annotation( "FMA:61966") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "fornix, crus anterius") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002940") AnnotationAssertion(rdfs:label "anterior column of fornix") SubClassOf( ) SubClassOf(Annotation( "NIFSTD"^^xsd:string) ObjectSomeValuesFrom( )) DisjointClasses(Annotation( "lexical"^^xsd:string) ) DisjointClasses(Annotation( "NIFSTD"^^xsd:string) ) # Class: (capsule of red nucleus) AnnotationAssertion(Annotation( "BIRNLEX:732") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "CR") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:cr") AnnotationAssertion( "BIRNLEX:732") AnnotationAssertion( "FMA:72450") AnnotationAssertion(Annotation( "BIRNLEX:732") "UMLS:C0152369") AnnotationAssertion(Annotation( "BIRNLEX:732") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=508") AnnotationAssertion(Annotation( "FMA:72450") "red nuclear capsule") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:508") Annotation( ) "capsula nuclei rubris tegmenti") AnnotationAssertion(Annotation( "NeuroNames:508") "capsule of the red nucleus") AnnotationAssertion(Annotation( "NeuroNames:508") Annotation( ) "nucleus ruber, capsula") AnnotationAssertion( "UBERON:0002941") AnnotationAssertion(rdfs:label "capsule of red nucleus") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (ventral posterolateral nucleus) AnnotationAssertion(Annotation( ) "The ventral posterolateral nucleus (VPL) is a nucleus of the thalamus. Together with the ventral posteromedial nucleus (VPM) it constitutes the ventral posterior nucleus. [WP,unvetted].") AnnotationAssertion(Annotation( "BIRNLEX:737") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "VPL") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:VPL") AnnotationAssertion( "BIRNLEX:737") AnnotationAssertion( "DHBA:10424") AnnotationAssertion( "DMBA:16430") AnnotationAssertion( "EMAPA:35910") AnnotationAssertion( "FMA:62200") AnnotationAssertion( "HBA:4425") AnnotationAssertion( "MA:0002894") AnnotationAssertion( "MBA:718") AnnotationAssertion( "NCIT:C33863") AnnotationAssertion(Annotation( "BIRNLEX:737") "UMLS:C0228337") AnnotationAssertion(Annotation( "BIRNLEX:737") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=344") AnnotationAssertion(Annotation( "BIRNLEX:737") "nucleus ventralis posterior lateralis thalami") AnnotationAssertion(Annotation( "BIRNLEX:737") "nucleus ventralis posterolateralis") AnnotationAssertion(Annotation( "BIRNLEX:737") "nucleus ventralis posterolateralis thalami") AnnotationAssertion(Annotation( "BIRNLEX:737") "nucleus ventralis thalami posterior lateralis") AnnotationAssertion(Annotation( "FMA:62200") "posterolateral ventral nucleus of thalamus") AnnotationAssertion(Annotation( "BIRNLEX:737") "posterolateral ventral nucleus of the thalamus") AnnotationAssertion(Annotation( "FMA:62200") "ventral posterolateral nucleus of thalamus") AnnotationAssertion(Annotation( "BIRNLEX:737") "ventral posterolateral nucleus of the thalamus") AnnotationAssertion(Annotation( "FMA:62200") "ventral posterolateral thalamic nucleus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "nucleus ventralis posterolateralis thalami") AnnotationAssertion(Annotation( "NeuroNames:344") "ventral posterior lateral nucleus") AnnotationAssertion(Annotation( "BAMS:VPL") "ventral posterior lateral nucleus of dorsal thalamus") AnnotationAssertion(Annotation( "BAMS:VPL") "ventral posterolateral nucleus of the thalamus principal part") AnnotationAssertion(Annotation( "NeuroNames:344") "ventral posterolateral nucleus of the thalamus, general") AnnotationAssertion(Annotation( "BAMS:VPL") "ventral posterolateral nucleus of the thalamus, principal part") AnnotationAssertion(Annotation( "BAMS:VPL") "ventroposterior lateral thalamic nucleus") AnnotationAssertion(Annotation( "NeuroNames:344") "ventroposterolateral nucleus of the thalamus") AnnotationAssertion( "UBERON:0002942") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "ventral posterolateral nucleus") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/1/1b/ThalamicNuclei.png"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) Annotation( "NIF"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (lingual gyrus) AnnotationAssertion(Annotation( "BIRNLEX:740") "Component of the occipital lobe. The rostral boundary of the lingual gyrus was the posterior extent of the parahippocampal gyrus whereas the caudal boundary was the most posterior coronal slice where the gyrus could be visualized. The medial and lateral boundaries were the medial portion of the temporal and occipital cortices and the medial bank of the collateral sulcus respectively (Christine Fennema-Notestine).") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:LgG") AnnotationAssertion( "BAMS:LiG") AnnotationAssertion( "BAMS:MOTG") AnnotationAssertion( "BIRNLEX:740") AnnotationAssertion( "DHBA:12151") AnnotationAssertion( "FMA:61904") AnnotationAssertion( "HBA:4191") AnnotationAssertion(Annotation( "BIRNLEX:740") "UMLS:C0152308") AnnotationAssertion(Annotation( "BIRNLEX:740") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=158") AnnotationAssertion(Annotation( "FMA:61904") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "gyrus occipitotemporalis medialis") AnnotationAssertion(Annotation( "FMA:61904") "lingula of cerebral hemisphere") AnnotationAssertion(Annotation( "FMA:61904") "medial occipitotemporal gyrus") AnnotationAssertion(Annotation( "FMA:61904") "medial occipitotemporal gyrus-2") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "gyrus lingualis") AnnotationAssertion(Annotation( "BAMS:MOTG") "medial occipito-temporal gyrus") AnnotationAssertion( "UBERON:0002943") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "lingual gyrus") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/a/a1/Gray727_lingual_gyrus.png"^^xsd:anyURI) SubClassOf( ) # Class: (spinothalamic tract of medulla) AnnotationAssertion(Annotation( "BIRNLEX:741") "Part of spinothalamic tract that is in the medulla.") AnnotationAssertion(Annotation( "BIRNLEX:741") Annotation( "FMA:72644") "spinothalamic tract") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:stm") AnnotationAssertion( "BIRNLEX:741") AnnotationAssertion( "FMA:72644") AnnotationAssertion( "GAID:703") AnnotationAssertion( "MESH:D013133") AnnotationAssertion(Annotation( "BIRNLEX:741") "UMLS:C0037953") AnnotationAssertion(Annotation( "BIRNLEX:741") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=810") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:810") "spinothalamic tract of the medulla") AnnotationAssertion(Annotation( "NeuroNames:810") Annotation( ) "tractus spinothalamicus (myelencephali)") AnnotationAssertion( "UBERON:0002944") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "spinothalamic tract of medulla") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/f/fe/Medulla_spinalis_-_tracts_-_English.svg"^^xsd:anyURI) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (ventral posteromedial nucleus of thalamus) AnnotationAssertion(Annotation( ) "The ventral posteromedial nucleus is a nucleus of the thalamus. [WP,unvetted].") AnnotationAssertion(Annotation( "BIRNLEX:743") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "VPM") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:Gus") AnnotationAssertion( "BAMS:SL") AnnotationAssertion( "BAMS:VPM") AnnotationAssertion( "BIRNLEX:743") AnnotationAssertion( "BM:Die-Th-VPM") AnnotationAssertion( "DHBA:10425") AnnotationAssertion( "DMBA:16429") AnnotationAssertion( "EMAPA:35911") AnnotationAssertion( "FMA:62202") AnnotationAssertion( "HBA:4424") AnnotationAssertion( "MBA:733") AnnotationAssertion( "NCIT:C33864") AnnotationAssertion(Annotation( "BIRNLEX:743") "UMLS:C0752056") AnnotationAssertion(Annotation( "BIRNLEX:743") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=347") AnnotationAssertion(Annotation( "FMA:62202") "arcuate nucleus of thalamus") AnnotationAssertion(Annotation( "BIRNLEX:743") "arcuate nucleus of the thalamus") AnnotationAssertion(Annotation( "FMA:62202") "arcuate nucleus-3") AnnotationAssertion(Annotation( "BIRNLEX:743") "nucleus arcuatus thalami") AnnotationAssertion(Annotation( "BIRNLEX:743") "nucleus semilunaris thalami") AnnotationAssertion(Annotation( "BIRNLEX:743") "nucleus ventralis posterior medialis thalami") AnnotationAssertion(Annotation( "BIRNLEX:743") "nucleus ventralis posteromedialis") AnnotationAssertion(Annotation( "BIRNLEX:743") "nucleus ventralis posteromedialis thalami") AnnotationAssertion(Annotation( "BIRNLEX:743") "nucleus ventrocaudalis anterior internus (hassler)") AnnotationAssertion(Annotation( "FMA:62202") "posteromedial ventral nucleus") AnnotationAssertion(Annotation( "FMA:62202") "posteromedial ventral nucleus of thalamus") AnnotationAssertion(Annotation( "BIRNLEX:743") "posteromedial ventral nucleus of the thalamus") AnnotationAssertion(Annotation( "FMA:62202") "semilunar nucleus") AnnotationAssertion(Annotation( "FMA:62202") "thalamic gustatory nucleus") AnnotationAssertion(Annotation( "FMA:62202") "ventral posterior medial nucleus") AnnotationAssertion(Annotation( "BIRNLEX:743") "ventral posterior medial nucleus of thalamus") AnnotationAssertion(Annotation( "FMA:62202") "ventral posteromedial nucleus of thalamus") AnnotationAssertion(Annotation( "BIRNLEX:743") "ventral posteromedial nucleus of the thalamus") AnnotationAssertion(Annotation( "BIRNLEX:743") "ventral posteromedial thalamic nucleus") AnnotationAssertion(Annotation( "BIRNLEX:743") "ventroposteromedial nucleus of the thalamus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "nucleus ventralis posteromedialis thalami") AnnotationAssertion(Annotation( "BAMS:VPM") "ventral posterior medial nucleus of dorsal thalamus") AnnotationAssertion(Annotation( "BAMS:VPM") "ventral posteromedial nucleus of the thalamus principal part") AnnotationAssertion(Annotation( "NeuroNames:347") "ventral posteromedial nucleus of the thalamus, general") AnnotationAssertion(Annotation( "BAMS:VPM") "ventral posteromedial nucleus of the thalamus, principal part") AnnotationAssertion(Annotation( "BAMS:VPM") "ventroposterior medial thalamic nucleus") AnnotationAssertion( "UBERON:0002945") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "ventral posteromedial nucleus of thalamus") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/1/1b/ThalamicNuclei.png"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (obsolete regional part of cerebellum) AnnotationAssertion( "UBERON:0002037") AnnotationAssertion( "BIRNLEX:748") AnnotationAssertion( "FMA:256150") AnnotationAssertion( "SCTID:119242005") AnnotationAssertion(Annotation( "BIRNLEX:748") "segment of cerebellum") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:256150") "subdivision of cerebellum") AnnotationAssertion( "UBERON:0002946") AnnotationAssertion(rdfs:label "obsolete regional part of cerebellum") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (frontal operculum) AnnotationAssertion(Annotation( "BIRNLEX:751") "Portion of frontal lobe that overlaps the insular cortex (adapted from Wikipedia).") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:FOp") AnnotationAssertion( "BAMS:fro") AnnotationAssertion( "BIRNLEX:751") AnnotationAssertion( "DHBA:12127") AnnotationAssertion( "FMA:74886") AnnotationAssertion( "HBA:4078") AnnotationAssertion(Annotation( "BIRNLEX:751") "UMLS:C0149547") AnnotationAssertion(Annotation( "BIRNLEX:751") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=2205") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:2205") Annotation( ) "nucleus ventralis oralis, pars medialis (Dewulf)") AnnotationAssertion(Annotation( ) Annotation( ) "operculum frontale") AnnotationAssertion( "UBERON:0002947") AnnotationAssertion(rdfs:label "frontal operculum") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (superior occipital gyrus) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:O1") AnnotationAssertion( "BAMS:SOG") AnnotationAssertion( "BIRNLEX:758") AnnotationAssertion( "DHBA:12154") AnnotationAssertion( "FMA:61901") AnnotationAssertion( "HBA:4212") AnnotationAssertion(Annotation( "BIRNLEX:758") "UMLS:C0228230") AnnotationAssertion(Annotation( "BIRNLEX:758") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=154") AnnotationAssertion(Annotation( "FMA:61901") "gyrus occipitalis primus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:154") Annotation( ) "gyrus occipitalis superior") AnnotationAssertion( "UBERON:0002948") AnnotationAssertion(rdfs:label "superior occipital gyrus") SubClassOf( ) # Class: (tectospinal tract) AnnotationAssertion(Annotation( ) "A long process of a CNS neuron, that carries efferent (outgoing) action potentials from the cell body in the superior colliculus of the midbrain towards target cells in the ventral spinal cord[GO].") AnnotationAssertion(Annotation( "NIF"^^xsd:string) "NIF and FMA differ in placement (spinal cord vs medulla)") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:ts") AnnotationAssertion( "BAMS:tsp") AnnotationAssertion( "BIRNLEX:759") AnnotationAssertion( "BM:TSp") AnnotationAssertion( "DHBA:12794") AnnotationAssertion( "DMBA:17802") AnnotationAssertion( "FMA:72620") AnnotationAssertion( "HBA:265505662") AnnotationAssertion( "MBA:877") AnnotationAssertion(Annotation( "BIRNLEX:759") "UMLS:C0228553") AnnotationAssertion(Annotation( "BIRNLEX:759") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=786") AnnotationAssertion(Annotation( "FMA:72620") "Held's bundle") AnnotationAssertion(Annotation( "FMA:72620") "tectospinal pathway") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:2769") "tectospinal pathway") AnnotationAssertion(Annotation( "NeuroNames:2769") "tectospinal tract") AnnotationAssertion(Annotation( "NeuroNames:786") "tectospinal tract of the medulla") AnnotationAssertion(Annotation( ) Annotation( ) "tractus tectospinalis") AnnotationAssertion(Annotation( "NeuroNames:2769") Annotation( ) "tractus tectospinalis") AnnotationAssertion( "UBERON:0002949") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "tectospinal tract") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/b/be/Gray670.png"^^xsd:anyURI) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf(Annotation( "weakened") Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) SubClassOf(Annotation( "weakened") Annotation( "NIFSTD"^^xsd:string) ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) # Class: (obsolete regional part of midbrain) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A regional part of brain that is part of a midbrain [Automatically generated definition].") AnnotationAssertion( "BIRNLEX:763") AnnotationAssertion( "FMA:61997") AnnotationAssertion( "SCTID:119239004") AnnotationAssertion(Annotation( "FMA:61997") "midbrain segment") AnnotationAssertion(Annotation( "BIRNLEX:763") "segment of midbrain") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002950") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "obsolete regional part of midbrain") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete regional part of intermediate hypothalamic region) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A regional part of brain that is part of a intermediate hypothalamic region [Automatically generated definition].") AnnotationAssertion( "BIRNLEX:767") AnnotationAssertion( "FMA:62310") AnnotationAssertion(Annotation( "FMA:62310") "intermediate hypothalamic region segment") AnnotationAssertion(Annotation( "BIRNLEX:767") "segment of intermediate hypothalamic region") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002951") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "obsolete regional part of intermediate hypothalamic region") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (intermediate acoustic stria) AnnotationAssertion(Annotation( "BIRNLEX:768") "White matter structure containing axons arising from cochlear nuclear complex (Brodal, Neurological Anatomy, 3rd ed, 1985, pg 609).") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:ias") AnnotationAssertion( "BIRNLEX:768") AnnotationAssertion( "DHBA:12755") AnnotationAssertion( "FMA:72497") AnnotationAssertion( "MBA:641") AnnotationAssertion(Annotation( "BIRNLEX:768") "UMLS:C0175455") AnnotationAssertion(Annotation( "BIRNLEX:768") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=603") AnnotationAssertion( "commissure of held") AnnotationAssertion(Annotation( "BIRNLEX:768") "intermediate acoustic stria (held)") AnnotationAssertion( "intermediate acoustic stria of held") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:603") Annotation( ) "striae acusticae intermedius") AnnotationAssertion( "UBERON:0002952") AnnotationAssertion(rdfs:label "intermediate acoustic stria") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ) # Class: (lateral lemniscus) AnnotationAssertion(Annotation( ) Annotation( "BIRNLEX:976") "A fiber bundle that runs through the medulla, pons and midbrain that arises in the cochlear nucleus and projects to various brainstem nuclei and ultimately the contralateral inferior colliculus of the midbrain. The brainstem nuclei include the superior olive, the medial nucleus of the trapezoid body, and the dorsal nucleus of the lateral lemniscus. Fibers leaving these brainstem nuclei ascending to the inferior colliculus rejoin the lateral lemniscus. In that sense, this is not a 'lemniscus' in the true sense of the word (second order, decussated sensory axons), as there is third (and out of the lateral superior olive, fourth) order information coming out of some of these brainstem nuclei. Adapted from Wikipedia.org (MM).") AnnotationAssertion( "UBERON:0003042") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:II") AnnotationAssertion( "BAMS:ll") AnnotationAssertion( "BIRNLEX:976") AnnotationAssertion( "BM:Pons-LL") AnnotationAssertion( "DHBA:12760") AnnotationAssertion( "DMBA:17774") AnnotationAssertion( "FMA:72502") AnnotationAssertion( "HBA:12958") AnnotationAssertion( "MBA:658") AnnotationAssertion(Annotation( "BIRNLEX:976") "UMLS:C0152375") AnnotationAssertion(Annotation( "BIRNLEX:976") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=609") AnnotationAssertion(Annotation( "FMA:72502") "lateral fillet") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:609") "central acoustic tract") AnnotationAssertion(Annotation( "NeuroNames:609") "lateral lemniscus (Reil)") AnnotationAssertion(Annotation( "NeuroNames:609") Annotation( ) "lemniscus acusticus") AnnotationAssertion(Annotation( ) Annotation( ) "lemniscus lateralis") AnnotationAssertion( "UBERON:0002953") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "lateral lemniscus") AnnotationAssertion( "Lateral:lemniscus.PNG"^^xsd:anyURI) SubClassOf(Annotation( "NIFSTD"^^xsd:string) ) DisjointClasses(Annotation( "lexical"^^xsd:string) ) # Class: (dorsal hypothalamic area) AnnotationAssertion(Annotation( ) "A relatively small region of the hypothalamus located inferior to the hypothalamic sulcus.") AnnotationAssertion(Annotation( "ZFA:0000347, ISBN:3764351209, ZFA:curator") "Brain structure which is the dorsal most region of the hypothalamus and expands laterally and emerges caudal to the ventral zone and is separated from the median tuberal portion by a deep ventral sulcus. From Neuroanatomy of the Zebrafish Brain[ZFA:0000347, ISBN:3764351209, ZFA:curator].") AnnotationAssertion(Annotation( "TA") "In humans it contains the following nuclei: portions of the dorsomedial nucleus [TA] (nucleus dorsomedialis [TA]), endopeduncular nucleus [TA]) (nucleus endopeduncularis [TA]), and portions of the nucleus of the ansa lenticularis (nucleus ansae lenticularis") AnnotationAssertion(Annotation( "BIRNLEX:777") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "DH") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:DA") AnnotationAssertion( "BAMS:DHA") AnnotationAssertion( "BAMS:HDA") AnnotationAssertion( "BIRNLEX:777") AnnotationAssertion( "BM:Die-Hy-HDA") AnnotationAssertion( "DHBA:13335") AnnotationAssertion( "FMA:62339") AnnotationAssertion(Annotation( "BIRNLEX:777") "UMLS:C0175318") AnnotationAssertion( "ZFA:0000347") AnnotationAssertion(Annotation( "BIRNLEX:777") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=430") AnnotationAssertion(Annotation( "ZFA:0000347") "dorsal hypothalamic zone") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:430") Annotation( ) "area dorsalis hypothalami") AnnotationAssertion(Annotation( "NeuroNames:430") Annotation( ) "area hypothalamica dorsalis") AnnotationAssertion(Annotation( "NeuroNames:430") Annotation( ) "nucleus hypothalamicus dorsalis") AnnotationAssertion( "UBERON:0002954") AnnotationAssertion(rdfs:comment ").") AnnotationAssertion(rdfs:label "dorsal hypothalamic area") SubClassOf( ) SubClassOf(Annotation( "NIFSTD"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (rhomboidal nucleus) AnnotationAssertion(Annotation( "BIRNLEX:778") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "Rh") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:RH") AnnotationAssertion( "BAMS:Rh") AnnotationAssertion( "BIRNLEX:778") AnnotationAssertion( "BTO:0002458") AnnotationAssertion( "DHBA:10447") AnnotationAssertion( "DMBA:16405") AnnotationAssertion( "FMA:62154") AnnotationAssertion( "HBA:4433") AnnotationAssertion( "MBA:189") AnnotationAssertion(Annotation( "BIRNLEX:778") "UMLS:C0228326") AnnotationAssertion(Annotation( "BIRNLEX:778") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=310") AnnotationAssertion(Annotation( "FMA:62154") "rhomboid nucleus") AnnotationAssertion(Annotation( "FMA:62154") "rhomboid thalamic nucleus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0002458") "nucleus commissuralis rhomboidalis") AnnotationAssertion(Annotation( "BTO:0002458") "nucleus rhomboidalis") AnnotationAssertion(Annotation( "NeuroNames:310") Annotation( ) "nucleus rhomboidalis thalami") AnnotationAssertion(Annotation( "NeuroNames:310") "rhomboid nucleus (Cajal 1904)") AnnotationAssertion(Annotation( "NeuroNames:310") "rhomboid nucleus of the thalamus") AnnotationAssertion( "UBERON:0002955") AnnotationAssertion(rdfs:label "rhomboidal nucleus") SubClassOf( ) SubClassOf(Annotation( "NIFSTD"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (granular layer of cerebellar cortex) AnnotationAssertion(Annotation( "GO:0021681") "The granular layer is the innermost layer of the cerebellar cortex. This layer contains densely packed small neurons, mostly granule cells. Some Golgi cells are found at the outer border. Granule neurons send parallel fibers to the upper molecular layer, where they synapse with Purkinje cell dendrites. Mossy fibers from the pontine nuclei in the white matter synapse with granule cell axons, Golgi cell axons and unipolar brush interneuron axons at cerebellar glomeruli in the granule cell layer.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:779") AnnotationAssertion( "BTO:0004425") AnnotationAssertion( "CALOHA:TS-1247") AnnotationAssertion( "EMAPA:35217") AnnotationAssertion( "FMA:83140") AnnotationAssertion( "MA:0000993") AnnotationAssertion( "MBA:1143") AnnotationAssertion( "NCIT:C49138") AnnotationAssertion(Annotation( "ncithesaurus:Granular_Layer_of_the_Cerebellum") "UMLS:C1708253") AnnotationAssertion(Annotation( "BIRNLEX:779") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=363") AnnotationAssertion(Annotation( "GO:0021681") "cerebellar granular layer") AnnotationAssertion( "cerebellar granule cell layer") AnnotationAssertion( "cerebellar granule layer") AnnotationAssertion(Annotation( "MA:0000993") "cerebellum granule cell layer") AnnotationAssertion( "cerebellum granule layer") AnnotationAssertion(Annotation( "BIRNLEX:779") "granule cell layer of cerebellar cortex") AnnotationAssertion(Annotation( "BTO:0004425") "stratum granulosum cerebelli") AnnotationAssertion(Annotation( "FMA:83140") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "stratum granulosum corticis cerebelli") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0004425") "granular layer of cerebellum") AnnotationAssertion( "UBERON:0002956") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "granular layer of cerebellar cortex") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (caudal central oculomotor nucleus) AnnotationAssertion(Annotation( "BIRNLEX:780") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "CC3") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:CC3") AnnotationAssertion( "BIRNLEX:780") AnnotationAssertion( "DHBA:12200") AnnotationAssertion( "FMA:72426") AnnotationAssertion( "HBA:9033") AnnotationAssertion(Annotation( "BIRNLEX:780") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=500") AnnotationAssertion(Annotation( "FMA:72426") "caudal central nucleus") AnnotationAssertion(Annotation( "FMA:72426") "caudal central nucleus of oculomotor nerve") AnnotationAssertion( "oculomotor nerve central caudal nucleus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:500") Annotation( ) "nucleus caudalis centralis oculomotorii") AnnotationAssertion(Annotation( "NeuroNames:500") Annotation( ) "nucleus centralis nervi oculomotorii") AnnotationAssertion( "UBERON:0002957") AnnotationAssertion(rdfs:label "caudal central oculomotor nucleus") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "NIFSTD"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (medial lemniscus of pons) AnnotationAssertion(Annotation( "BIRNLEX:781") "Part of medial lemniscus located within the pons.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:mlp") AnnotationAssertion( "BIRNLEX:781") AnnotationAssertion( "FMA:72503") AnnotationAssertion(Annotation( "BIRNLEX:781") "UMLS:C0228439") AnnotationAssertion(Annotation( "BIRNLEX:781") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=610") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "medial lemniscus of pons of varolius") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "pons medial lemniscus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "pons of varolius medial lemniscus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BIRNLEX:887") "lemniscus medial") AnnotationAssertion(Annotation( "NeuroNames:610") Annotation( ) "lemniscus medialis (pontis)") AnnotationAssertion(Annotation( "NeuroNames:610") "medial lemniscus of the pons") AnnotationAssertion( "UBERON:0002958") AnnotationAssertion(rdfs:label "medial lemniscus of pons") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf(Annotation( "FMA"^^xsd:string) Annotation( "NIFSTD"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (subfascicular nucleus) AnnotationAssertion(Annotation( "BIRNLEX:783") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "SF") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:SF") AnnotationAssertion( "BIRNLEX:783") AnnotationAssertion( "FMA:62155") AnnotationAssertion(Annotation( "BIRNLEX:783") "UMLS:C0175256") AnnotationAssertion(Annotation( "BIRNLEX:783") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=311") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:311") Annotation( ) "nucleus subfascicularis") AnnotationAssertion( "UBERON:0002959") AnnotationAssertion(rdfs:label "subfascicular nucleus") SubClassOf( ) SubClassOf(Annotation( "NIFSTD"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (central oculomotor nucleus) AnnotationAssertion(Annotation( "BIRNLEX:786") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "C3") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:786") AnnotationAssertion( "DHBA:12201") AnnotationAssertion( "FMA:72425") AnnotationAssertion( "HBA:9034") AnnotationAssertion(Annotation( "BIRNLEX:786") "UMLS:C0175384") AnnotationAssertion(Annotation( "BIRNLEX:786") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=499") AnnotationAssertion( "central nucleus of perlia") AnnotationAssertion( "nucleus of perlia") AnnotationAssertion(Annotation( "FMA:72425") "spitzka's nucleus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:499") Annotation( ) "nucleus nervi oculomotorii centralis") AnnotationAssertion(Annotation( "NeuroNames:499") "perlia nucleus of oculomotor nerve") AnnotationAssertion( "UBERON:0002960") AnnotationAssertion(rdfs:label "central oculomotor nucleus") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "NIFSTD"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (archicortex) AnnotationAssertion(Annotation( ) "A portion of the cerebral cortex that, with the paleocortex, develops in association with the olfactory system, and which is phylogenetically older than the neocortex and lacks its layered structure. The embryonic archicortex corresponds to the cortex of the dentate gyrus and hippocampus in mature mammals. Being part of the limbic system, it has functions related to emotions and formation of memory. Signals being sent from the limbic lobe to the hippocampal formations can go via the archicortex as an intermediate.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:ACx") AnnotationAssertion( "BIRNLEX:787") AnnotationAssertion( "DHBA:10293") AnnotationAssertion( "EHDAA2:0004496") AnnotationAssertion( "FMA:62424") AnnotationAssertion(Annotation( "FMA:62424") "archipallium") AnnotationAssertion( "uberon") AnnotationAssertion( "hippocampal pallium") AnnotationAssertion(Annotation( "NeuroNames:170") "hippocampus") AnnotationAssertion(Annotation( "NeuroNames:170") "intralimbic gyrus") AnnotationAssertion( "UBERON:0002961") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "archicortex") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (adductor pollicis muscle) AnnotationAssertion(Annotation( ) "A muscle in the manus that functions to adduct the thumb. It has two heads: transverse and oblique. It is a fleshy, flat, triangular, and fan-shaped muscle deep in the thenar compartment beneath the long flexor tendons and the lumbrical muscles at the center of the palm. It overlies the metacarpal bones and the interosseous muscles[WP].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:36213") AnnotationAssertion( "FMA:37380") AnnotationAssertion(Annotation( ) "adductor pollicis") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "EMAPA:36213") "adductor digiti primi") AnnotationAssertion(Annotation( ) Annotation( ) "musculus adductor pollicis") AnnotationAssertion( "UBERON:0002962") AnnotationAssertion(rdfs:label "adductor pollicis muscle") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/d/df/Musculusadductorpollicis.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "medial side of the base of the proximal phalanx of the thumb and the ulnar sesamoid") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "medial side of the base of the proximal phalanx of the thumb and the ulnar sesamoid") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (caudal pontine reticular nucleus) AnnotationAssertion(Annotation( ) "The caudal pontine reticular nucleus is composed of gigantocellular neurons. In rabbits and cats it is exclusively giant cells, however in humans there are normally sized cells as well. The pontis caudalis is rostral to the gigantocellular nucleus and is located in the caudal pons, as the name would indicate. The pontis caudalis has been known to mediate head movement, in concert with the nucleus gigantocellularis and the superior colliculus. The neurons in the dorsal half of this nuclei fire rhythmically during mastication, and in an anesthetized animal it is possible to induce mastication via electrical stimulation of the PC or adjacent areas of the gigantocellular nucleus. The pontis caudalis is also thought to play a role in the grinding of teeth during sleep.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:PRNc") AnnotationAssertion( "BAMS:PnC") AnnotationAssertion( "BIRNLEX:792") AnnotationAssertion( "DHBA:12493") AnnotationAssertion( "FMA:72469") AnnotationAssertion( "HBA:9162") AnnotationAssertion( "MBA:1093") AnnotationAssertion(Annotation( "FMA:72469") "pontine reticular nucleus, caudal part") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "nucleus reticularis pontis caudalis") AnnotationAssertion(Annotation( "BAMS:PRNc") "pontine reticular nucleus caudal part") AnnotationAssertion(Annotation( "BAMS:PnC") "pontine reticular nucleus caudal part") AnnotationAssertion( "UBERON:0002963") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "caudal pontine reticular nucleus") SubClassOf( ) # Class: (dorsal oculomotor nucleus) AnnotationAssertion(Annotation( "BIRNLEX:793") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "D3") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:D3") AnnotationAssertion( "BIRNLEX:793") AnnotationAssertion( "DHBA:12202") AnnotationAssertion( "FMA:62442") AnnotationAssertion( "HBA:9035") AnnotationAssertion(Annotation( "BIRNLEX:793") "UMLS:C0175377") AnnotationAssertion(Annotation( "BIRNLEX:793") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=493") AnnotationAssertion(Annotation( ) "dorsal nucleus of oculomotor nuclear complex") AnnotationAssertion(Annotation( "FMA:62442") "dorsal oculomotor cell column") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:493") Annotation( ) "nucleus nervi oculomotorii, pars dorsalis") AnnotationAssertion( "UBERON:0002964") AnnotationAssertion(rdfs:label "dorsal oculomotor nucleus") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "NIFSTD"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (rostral intralaminar nuclear group) AnnotationAssertion(Annotation( "BIRNLEX:794") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "RIL") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:RIL") AnnotationAssertion( "BIRNLEX:794") AnnotationAssertion( "DHBA:10443") AnnotationAssertion( "FMA:62164") AnnotationAssertion( "HBA:12929") AnnotationAssertion(Annotation( "BIRNLEX:794") "UMLS:C0175263") AnnotationAssertion(Annotation( "BIRNLEX:794") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=318") AnnotationAssertion(Annotation( "DHBA:AILN") "anterior group of intralaminar nuclei") AnnotationAssertion(Annotation( "BIRNLEX:794") "nuclei intralaminares rostrales") AnnotationAssertion(Annotation( "HBA:ILr") "rostral group of intralaminar nuclei") AnnotationAssertion(Annotation( "FMA:62164") "rostral intralaminar nuclear group") AnnotationAssertion(Annotation( "FMA:62164") "rostral intralaminar nuclei") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002965") AnnotationAssertion(rdfs:label "rostral intralaminar nuclear group") SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) DisjointClasses(Annotation( "lexical"^^xsd:string) ) # Class: (obsolete regional part of midbrain tectum) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A regional part of brain that is part of a midbrain tectum [Automatically generated definition].") AnnotationAssertion( "BIRNLEX:795") AnnotationAssertion( "FMA:62398") AnnotationAssertion(Annotation( "FMA:62398") "midbrain tectum segment") AnnotationAssertion(Annotation( "BIRNLEX:795") "segment of midbrain tectum") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002966") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "obsolete regional part of midbrain tectum") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (cingulate gyrus) AnnotationAssertion(Annotation( "BIRNLEX:798") "One of the convolutions on the medial surface of the cerebral hemisphere. It surrounds the rostral part of the brain and interhemispheric commissure and forms part of the limbic system. (MSH) One of three essential structures comprising the limbic lobe, the other two being the hippocampus and parahippocampal gyrus. (CSP).") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:CG") AnnotationAssertion( "BAMS:CgG") AnnotationAssertion( "BIRNLEX:798") AnnotationAssertion( "BM:Tel-CG") AnnotationAssertion( "BTO:0003976") AnnotationAssertion( "DHBA:12156") AnnotationAssertion( "FMA:62434") AnnotationAssertion( "HBA:4220") AnnotationAssertion( "NCIT:C96217") AnnotationAssertion(Annotation( "BIRNLEX:798") "UMLS:C0018427") AnnotationAssertion(Annotation( "ncithesaurus:Cingulate_Gyrus") "UMLS:C0018427") AnnotationAssertion(Annotation( "BIRNLEX:798") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=159") AnnotationAssertion(Annotation( "FMA:62434") "cingulate area") AnnotationAssertion(Annotation( "FMA:62434") "cingulate region") AnnotationAssertion(Annotation( "FMA:62434") "falciform lobe") AnnotationAssertion(Annotation( "FMA:62434") "upper limbic gyrus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:159") "cingular gyrus") AnnotationAssertion(Annotation( "NeuroNames:159") Annotation( ) "gyri cinguli") AnnotationAssertion( "UBERON:0002967") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "cingulate gyrus") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/d/dc/Gray727_cingulate_gyrus.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (central gray substance of pons) AnnotationAssertion( ) AnnotationAssertion( "BAMS:CGPn") AnnotationAssertion( "BAMS:PCG") AnnotationAssertion( "BIRNLEX:799") AnnotationAssertion( "DHBA:146034964") AnnotationAssertion( "FMA:72470") AnnotationAssertion( "HBA:10147") AnnotationAssertion( "MBA:898") AnnotationAssertion(Annotation( "FMA:72470") "central gray of pons") AnnotationAssertion(Annotation( "FMA:72470") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "griseum centrale pontis") AnnotationAssertion(Annotation( "FMA:72470") "pontine central gray") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BAMS:CGPn") "central gray of the pons") AnnotationAssertion( "UBERON:0002968") AnnotationAssertion(rdfs:label "central gray substance of pons") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (inferior temporal sulcus) AnnotationAssertion(Annotation( ) "The inferior surface of the temporal lobe is concave, and is continuous posteriorly with the tentorial surface of the occipital lobe. It is traversed by the inferior temporal sulcus, which extends from near the occipital pole behind, to within a short distance of the temporal pole in front, but is frequently subdivided by bridging gyri.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:its") AnnotationAssertion( "BIRNLEX:800") AnnotationAssertion( "BM:Tel-Cx-ITS") AnnotationAssertion( "DHBA:10632") AnnotationAssertion( "FMA:83784") AnnotationAssertion( "HBA:9379") AnnotationAssertion( "NCIT:C32793") AnnotationAssertion(Annotation( "BIRNLEX:800") "UMLS:C0228242") AnnotationAssertion(Annotation( "ncithesaurus:Inferior_Temporal_Sulcus") "UMLS:C0228242") AnnotationAssertion(Annotation( "BIRNLEX:800") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=130") AnnotationAssertion(Annotation( "FMA:83784") "inferior temporal sulcus-1") AnnotationAssertion( "middle temporal sulcus (szikla)") AnnotationAssertion(Annotation( "FMA:83784") "second temporal sulcus") AnnotationAssertion(Annotation( "FMA:83784") "sulcus t2") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:130") "middle temporal fissure (Crosby)") AnnotationAssertion(Annotation( "NeuroNames:130") Annotation( ) "sulcus temporalis inferior") AnnotationAssertion(Annotation( "NeuroNames:130") Annotation( ) "sulcus temporalis medius (Roberts)") AnnotationAssertion(Annotation( "NeuroNames:130") Annotation( ) "sulcus temporalis secundus") AnnotationAssertion( "UBERON:0002969") AnnotationAssertion(rdfs:label "inferior temporal sulcus") SubClassOf( ) # Class: (intermediate oculomotor nucleus) AnnotationAssertion(Annotation( "BIRNLEX:803") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "I3") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:I3") AnnotationAssertion( "BIRNLEX:803") AnnotationAssertion( "DHBA:12203") AnnotationAssertion( "FMA:72420") AnnotationAssertion( "HBA:9036") AnnotationAssertion(Annotation( "BIRNLEX:803") "UMLS:C0175378") AnnotationAssertion(Annotation( "BIRNLEX:803") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=494") AnnotationAssertion(Annotation( ) "intermediate nucleus of oculomotor nuclear complex") AnnotationAssertion(Annotation( "FMA:72420") "intermediate oculomotor cell column") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BAMS:I3") "interoculomotor nucleus") AnnotationAssertion(Annotation( "NeuroNames:494") Annotation( ) "nucleus nervi oculomotorii, pars intermedius") AnnotationAssertion( "UBERON:0002970") AnnotationAssertion(rdfs:label "intermediate oculomotor nucleus") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "NIFSTD"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (periolivary nucleus) AnnotationAssertion(Annotation( ) "A nucleus of the superior olivary complex that surrounds the primary superior olivary nuclei.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:POR") AnnotationAssertion( "BAMS:PeO") AnnotationAssertion( "BIRNLEX:804") AnnotationAssertion( "DHBA:12464") AnnotationAssertion( "EMAPA:35680") AnnotationAssertion( "HBA:9179") AnnotationAssertion( "MA:0002757") AnnotationAssertion( "MBA:122") AnnotationAssertion(Annotation( "BIRNLEX:804") "UMLS:C0175432") AnnotationAssertion(Annotation( "BIRNLEX:804") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=574") AnnotationAssertion(Annotation( "FMA:72475") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "nuclei periolivares") AnnotationAssertion(Annotation( "FMA:72475") "peri-olivary nuclei") AnnotationAssertion( "peri-olivary nucleus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "DHBA:12464") Annotation( ) "POI") AnnotationAssertion(Annotation( "NeuroNames:574") Annotation( ) "nucleus periolivaris") AnnotationAssertion(Annotation( "BAMS:POR") "periolivary nuclei") AnnotationAssertion(Annotation( "BAMS:POR") "periolivary region") AnnotationAssertion(Annotation( "BAMS:POR") "superior olivary complex periolivary region") AnnotationAssertion( "UBERON:0002971") AnnotationAssertion(rdfs:label "periolivary nucleus") SubClassOf( ) # Class: (centromedian nucleus of thalamus) AnnotationAssertion(Annotation( ) "In the anatomy of the brain, the centromedian nucleus, also known as the centrum medianum, (CM or Cm-Pf) is a part of the intralaminar nucleus (ILN) of the thalamus. There are two centromedian nuclei arranged bilaterally. It contains about 2000 neurons per cubic millimetre and has a volume of about 310 cubic millimetres with 664,000 neurons in total. [WP,unvetted].") AnnotationAssertion(Annotation( "BIRNLEX:805") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "CMn") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:CM") AnnotationAssertion( "BAMS:CMn") AnnotationAssertion( "BIRNLEX:805") AnnotationAssertion( "DHBA:10449") AnnotationAssertion( "DMBA:16402") AnnotationAssertion( "EV:0100215") AnnotationAssertion( "FMA:62165") AnnotationAssertion( "NCIT:C32284") AnnotationAssertion(Annotation( "BIRNLEX:805") "UMLS:C0228351") AnnotationAssertion(Annotation( "ncithesaurus:Centromedian_Nucleus_of_the_Thalamus") "UMLS:C0920328") AnnotationAssertion(Annotation( "BIRNLEX:805") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=323") AnnotationAssertion(Annotation( "FMA:62165") "central magnocellular nucleus of thalamus") AnnotationAssertion(Annotation( "FMA:62165") "central nucleus-1") AnnotationAssertion(Annotation( "FMA:62165") "centre median nucleus") AnnotationAssertion(Annotation( "FMA:62165") "centromedian nucleus") AnnotationAssertion(Annotation( "FMA:62165") "centromedian nucleus of thalamus") AnnotationAssertion(Annotation( "FMA:62165") "centromedian thalamic nucleus") AnnotationAssertion(Annotation( "BIRNLEX:805") "centrum medianum") AnnotationAssertion(Annotation( "BIRNLEX:805") "centrum medianum thalami") AnnotationAssertion( "noyau centre median of Luys") AnnotationAssertion(Annotation( "BIRNLEX:805") "nucleus centralis centralis") AnnotationAssertion(Annotation( "BIRNLEX:805") "nucleus centralis thalami (Hassler)") AnnotationAssertion(Annotation( "BIRNLEX:805") "nucleus centri mediani thalami") AnnotationAssertion(Annotation( "BIRNLEX:805") "nucleus centromedianus") AnnotationAssertion(Annotation( "BIRNLEX:805") "nucleus centromedianus thalami") AnnotationAssertion(Annotation( "BIRNLEX:805") "nucleus centrum medianum") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BAMS:CM") "centromedial thalamic nucleus") AnnotationAssertion(Annotation( ) Annotation( ) "nucleus centromedianus thalami") AnnotationAssertion( "UBERON:0002972") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "centromedian nucleus of thalamus") SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (parahippocampal gyrus) AnnotationAssertion(Annotation( "BIRNLEX:807") "Component of the temporal lobe on the mesial surface, posterior to the entorhinal cortex. The rostral and caudal boundaries are the posterior end of the netorhinal cortex and the caudal portion of the hippocampus, respectively. The medial boudnary is designated as the medial aspect off the temporal lobe and the lateral boundary is the collateral sulcus (Christine Fennema-Notestine).") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:PHG") AnnotationAssertion( "BIRNLEX:807") AnnotationAssertion( "BTO:0004380") AnnotationAssertion( "CALOHA:TS-2038") AnnotationAssertion( "DHBA:12162") AnnotationAssertion( "EV:0100181") AnnotationAssertion( "FMA:61918") AnnotationAssertion( "GAID:634") AnnotationAssertion( "HBA:4242") AnnotationAssertion( "MESH:A08.186.211.577.710") AnnotationAssertion( "NCIT:C33262") AnnotationAssertion(Annotation( "BIRNLEX:807") "UMLS:C0228249") AnnotationAssertion(Annotation( "ncithesaurus:Parahippocampal_Gyrus") "UMLS:C0228249") AnnotationAssertion(Annotation( "BIRNLEX:807") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=164") AnnotationAssertion(Annotation( "FMA:61918") "hippocampal gyrus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:164") Annotation( ) "gyrus hippocampi") AnnotationAssertion(Annotation( ) Annotation( ) "gyrus parahippocampalis") AnnotationAssertion(Annotation( "NeuroNames:164") Annotation( ) "gyrus parahippocampi") AnnotationAssertion(Annotation( "BTO:0004380") "hippocampal convolution") AnnotationAssertion( "UBERON:0002973") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "parahippocampal gyrus") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/b/b1/Human_brainstem_anterior_view_2_description.JPG"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA"^^xsd:string) Annotation( "NIF"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "Wikipedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (molecular layer of cerebellar cortex) AnnotationAssertion(Annotation( "GO:0021679") "The molecular layer is the outermost layer of the cerebellar cortex. It contains the parallel fibers of the granule cells, interneurons such as stellate and basket cells, and the dendrites of the underlying Purkinje cells.") AnnotationAssertion( "revisit logical definition after using brain layer patterns") AnnotationAssertion( "Compare with ZFA:0000636 - cerebellar crest, which is also composed of parallel fibers but located in a more restricted nucleus within the cerebellum") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:thf") AnnotationAssertion( "BIRNLEX:810") AnnotationAssertion( "CALOHA:TS-1248") AnnotationAssertion( "EMAPA:35221") AnnotationAssertion( "FMA:83897") AnnotationAssertion( "MA:0000996") AnnotationAssertion( "MBA:1144") AnnotationAssertion( "NCIT:C49139") AnnotationAssertion(Annotation( "BIRNLEX:810") "UMLS:C0228469") AnnotationAssertion(Annotation( "BIRNLEX:810") "UMLS:C1289474") AnnotationAssertion(Annotation( "ncithesaurus:Molecular_Layer_of_the_Cerebellum") "UMLS:C1709064") AnnotationAssertion(Annotation( "BIRNLEX:810") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=366") AnnotationAssertion(Annotation( "GO:0021679") "cerebellar molecular layer") AnnotationAssertion( "cerebellum molecular cell layer") AnnotationAssertion( "cerebellum molecular layer") AnnotationAssertion(Annotation( "FMA:83897") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "stratum moleculare corticis cerebelli") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:366") Annotation( ) "fasciculi thalami") AnnotationAssertion(Annotation( "NeuroNames:366") "thalamic fiber tracts") AnnotationAssertion( "UBERON:0002974") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "molecular layer of cerebellar cortex") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (medial oculomotor nucleus) AnnotationAssertion(Annotation( "BIRNLEX:813") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "M3") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:M3") AnnotationAssertion( "BIRNLEX:813") AnnotationAssertion( "DHBA:12204") AnnotationAssertion( "FMA:72421") AnnotationAssertion( "HBA:9037") AnnotationAssertion(Annotation( "BIRNLEX:813") "UMLS:C0175379") AnnotationAssertion(Annotation( "BIRNLEX:813") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=495") AnnotationAssertion(Annotation( ) "medial nucleus of oculomotor nuclear complex") AnnotationAssertion(Annotation( "FMA:72421") "medial oculomotor cell column") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:495") Annotation( ) "nucleus nervi oculomotorii, pars medialis") AnnotationAssertion( "UBERON:0002975") AnnotationAssertion(rdfs:label "medial oculomotor nucleus") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "NIFSTD"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (preolivary nucleus) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:PrO") AnnotationAssertion( "BIRNLEX:814") AnnotationAssertion( "DHBA:266441709") AnnotationAssertion( "FMA:72474") AnnotationAssertion( "HBA:9180") AnnotationAssertion(Annotation( "BIRNLEX:814") "UMLS:C0175431") AnnotationAssertion(Annotation( "BIRNLEX:814") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=573") AnnotationAssertion(Annotation( "FMA:72474") "preolivary nuclei") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:573") Annotation( ) "nucleus preolivaris") AnnotationAssertion( "UBERON:0002976") AnnotationAssertion(rdfs:label "preolivary nucleus") SubClassOf( ) # Class: (triangular septal nucleus) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:STN") AnnotationAssertion( "BAMS:TRS") AnnotationAssertion( "BAMS:TS") AnnotationAssertion( "BIRNLEX:816") AnnotationAssertion( "BM:Tel-Spt-STN") AnnotationAssertion( "DHBA:266441491") AnnotationAssertion( "DMBA:15779") AnnotationAssertion( "FMA:61880") AnnotationAssertion( "MBA:581") AnnotationAssertion(Annotation( "BIRNLEX:816") "UMLS:C0262351") AnnotationAssertion(Annotation( "BIRNLEX:816") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=263") AnnotationAssertion(Annotation( "FMA:61880") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "nucleus triangularis septi") AnnotationAssertion(Annotation( "FMA:61880") "triangular nucleus of septum") AnnotationAssertion(Annotation( "BIRNLEX:816") "triangular nucleus septum (cajal)") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:263") Annotation( ) "nucleus septalis triangularis") AnnotationAssertion(Annotation( "NeuroNames:263") "triangular nucleus of the septum") AnnotationAssertion( "UBERON:0002977") AnnotationAssertion(rdfs:label "triangular septal nucleus") SubClassOf( ) SubClassOf(Annotation( "NIFSTD"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (oral part of ventral lateral nucleus) AnnotationAssertion(Annotation( "BIRNLEX:817") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "VLO") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:VLO") AnnotationAssertion( "BIRNLEX:817") AnnotationAssertion( "FMA:62193") AnnotationAssertion(Annotation( "BIRNLEX:817") "UMLS:C0175280") AnnotationAssertion(Annotation( "BIRNLEX:817") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=338") AnnotationAssertion(Annotation( "BIRNLEX:817") "nucleus lateralis oralis situs principalis") AnnotationAssertion(Annotation( "BIRNLEX:817") "nucleus ventralis lateralis, pars oralis") AnnotationAssertion(Annotation( "BIRNLEX:817") "nucleus ventrooralis externus, anterior part (van buren)") AnnotationAssertion(Annotation( "BIRNLEX:817") "subnucleus rostralis") AnnotationAssertion(Annotation( "FMA:62193") "ventral anterior nucleus, pars densicellularis") AnnotationAssertion(Annotation( "FMA:62193") "ventral lateral anterior nucleus") AnnotationAssertion(Annotation( "FMA:62193") "ventral lateral nucleus, oral part") AnnotationAssertion(Annotation( "FMA:62193") "ventral lateral thalamic nucleus, oral part") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:338") "oral part of the ventral lateral nucleus") AnnotationAssertion( "UBERON:0002978") AnnotationAssertion(rdfs:label "oral part of ventral lateral nucleus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (Purkinje cell layer of cerebellar cortex) AnnotationAssertion(Annotation( "GO:0021680") "The Purkinje cell layer lies just underneath the molecular layer of the cerebellar cortex. It contains the neuronal cell bodies of the Purkinje cells that are arranged side by side in a single layer. Candelabrum interneurons are vertically oriented between the Purkinje cells. Purkinje neurons are inhibitory and provide the output of the cerebellar cortex through axons that project into the white matter. Extensive dendritic trees from the Purkinje cells extend upward in a single plane into the molecular layer where they synapse with parallel fibers of granule cells.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:818") AnnotationAssertion( "BTO:0004909") AnnotationAssertion( "EMAPA:35223") AnnotationAssertion( "FMA:83896") AnnotationAssertion( "MA:0000997") AnnotationAssertion( "MBA:1145") AnnotationAssertion( "NCIT:C49140") AnnotationAssertion(Annotation( "BIRNLEX:818") "UMLS:C0228469") AnnotationAssertion(Annotation( "BIRNLEX:818") "UMLS:C1289475") AnnotationAssertion(Annotation( "ncithesaurus:Purkinje_Cell_Layer_of_the_Cerebellum") "UMLS:C1709776") AnnotationAssertion(Annotation( "BIRNLEX:818") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=365") AnnotationAssertion(Annotation( "FMA:83896") "Purkinje cell layer") AnnotationAssertion(Annotation( "FMA:83896") Annotation( "GO:0021694") "cerebellar Purkinje cell layer") AnnotationAssertion( "cerebellum Purkinje cell layer") AnnotationAssertion( "cerebellum Purkinje layer") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:365") Annotation( ) "nuclei reticulares (thalami)") AnnotationAssertion(Annotation( "NeuroNames:365") Annotation( ) "nucleus reticularis") AnnotationAssertion(Annotation( "NeuroNames:365") Annotation( ) "nucleus reticulatus (thalami)") AnnotationAssertion(Annotation( "NeuroNames:365") Annotation( ) "nucleus thalamicus reticularis") AnnotationAssertion(Annotation( "NeuroNames:365") "reticular nucleus thalamus (Arnold)") AnnotationAssertion(Annotation( "NeuroNames:365") Annotation( ) "reticulatum thalami (Hassler)") AnnotationAssertion( "UBERON:0002979") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "Purkinje cell layer of cerebellar cortex") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (opercular part of inferior frontal gyrus) AnnotationAssertion(Annotation( "BIRNLEX:823") "Component of the inferior frontal gyrus.defined as the first gyrus from the precentral gyrus.") AnnotationAssertion(Annotation( ) "inferior frontal gyrus, pars opercularis") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:IFGOp") AnnotationAssertion( "BAMS:OpIFG") AnnotationAssertion( "BIRNLEX:823") AnnotationAssertion( "DHBA:12119") AnnotationAssertion( "FMA:61981") AnnotationAssertion( "HBA:4041") AnnotationAssertion(Annotation( "BIRNLEX:823") "UMLS:C0262296") AnnotationAssertion(Annotation( "BIRNLEX:823") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=87") AnnotationAssertion(Annotation( "FMA:61981") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "gyrus frontalis inferior, pars opercularis") AnnotationAssertion(Annotation( "FMA:61981") "opercular portion of inferior frontal gyrus") AnnotationAssertion(Annotation( "FMA:61981") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "pars opercularis") AnnotationAssertion(Annotation( "BIRNLEX:823") "pars opercularis gyri frontalis inferioris") AnnotationAssertion(Annotation( "FMA:61981") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "pars posterior of inferior frontal gyrus") AnnotationAssertion(Annotation( "FMA:61981") "posterior part of inferior frontal gyrus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BAMS:IFGOp") "inferior frontal gyrus, opercular part") AnnotationAssertion( "UBERON:0002980") AnnotationAssertion(rdfs:label "opercular part of inferior frontal gyrus") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (pulvinar nucleus) AnnotationAssertion(Annotation( "BIRNLEX:824") "One of a set of nuclei located in the posterior thalamus, that projects to all or nearly all extra-striate visual areas.") AnnotationAssertion(Annotation( "BIRNLEX:824") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "Pul") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:PUL") AnnotationAssertion( "BAMS:Pul") AnnotationAssertion( "BAMS:Pulv") AnnotationAssertion( "BIRNLEX:824") AnnotationAssertion( "BM:Die-Th-Pl") AnnotationAssertion( "BTO:0004352") AnnotationAssertion( "DHBA:10409") AnnotationAssertion( "EV:0100213") AnnotationAssertion( "FMA:62178") AnnotationAssertion( "GAID:662") AnnotationAssertion( "MESH:A08.186.211.730.385.826.701.485.600") AnnotationAssertion(Annotation( "BIRNLEX:824") "UMLS:C0152347") AnnotationAssertion(Annotation( "BIRNLEX:824") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=328") AnnotationAssertion(Annotation( "FMA:62178") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "nuclei pulvinares") AnnotationAssertion(Annotation( "FMA:62178") "pulvinar") AnnotationAssertion(Annotation( "FMA:62178") "pulvinar nuclei") AnnotationAssertion(Annotation( "BIRNLEX:824") "pulvinar thalami") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:328") Annotation( ) "nucleus pulvinaris") AnnotationAssertion(Annotation( "NeuroNames:328") Annotation( ) "nucleus pulvinaris thalami") AnnotationAssertion(Annotation( "NeuroNames:328") "posterior nucleus (P)") AnnotationAssertion(Annotation( "NeuroNames:328") "pulvinar thalamus") AnnotationAssertion( "UBERON:0002981") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "pulvinar nucleus") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/b/b7/Gray719.png"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (inferior pulvinar nucleus) AnnotationAssertion(Annotation( "BIRNLEX:830") "One of four subdivisions recognized in the primate pulvinar based on initially on topography, located ventrally between the medial and lateral geniculate bodies (Carpenter, A core text of neuroanatomy, 3rd ed., 1985, pg 238).") AnnotationAssertion(Annotation( "BIRNLEX:830") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "IPul") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:IPul") AnnotationAssertion( "BAMS:Ipul") AnnotationAssertion( "BIRNLEX:830") AnnotationAssertion( "BM:Die-Th-Pl-Pli") AnnotationAssertion( "DHBA:10413") AnnotationAssertion( "FMA:62183") AnnotationAssertion( "HBA:4414") AnnotationAssertion(Annotation( "BIRNLEX:830") "UMLS:C0228346") AnnotationAssertion(Annotation( "BIRNLEX:830") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=332") AnnotationAssertion(Annotation( "BIRNLEX:830") "nucleus pulvinaris inferior") AnnotationAssertion(Annotation( "BIRNLEX:830") "nucleus pulvinaris inferior thalami") AnnotationAssertion(Annotation( "BIRNLEX:830") "nucleus pulvinaris thalami, pars inferior") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002982") AnnotationAssertion(rdfs:label "inferior pulvinar nucleus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lateral posterior nucleus of thalamus) AnnotationAssertion(Annotation( ) "The lateral posterior nucleus is a nucleus of the thalamus. It acts in concert with the pulvinar.") AnnotationAssertion(Annotation( "BIRNLEX:835") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "LP") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:LP") AnnotationAssertion( "BIRNLEX:835") AnnotationAssertion( "BM:Die-Th-LP") AnnotationAssertion( "BTO:0004351") AnnotationAssertion( "DHBA:10408") AnnotationAssertion( "DMBA:16435") AnnotationAssertion( "EV:0100212") AnnotationAssertion( "FMA:62177") AnnotationAssertion( "HBA:4410") AnnotationAssertion( "MBA:218") AnnotationAssertion( "NCIT:C32944") AnnotationAssertion(Annotation( "BIRNLEX:835") "UMLS:C0228341") AnnotationAssertion(Annotation( "ncithesaurus:Lateral_Posterior_Nucleus_of_the_Thalamus") "UMLS:C0228341") AnnotationAssertion(Annotation( "BIRNLEX:835") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=327") AnnotationAssertion(Annotation( "FMA:62177") "lateral posterior nucleus") AnnotationAssertion(Annotation( "FMA:62177") "lateral posterior nucleus of thalamus") AnnotationAssertion(Annotation( "BIRNLEX:835") "lateral posterior nucleus of the thalamus") AnnotationAssertion(Annotation( "FMA:62177") "lateral posterior thalamic nucleus") AnnotationAssertion(Annotation( "FMA:62177") "laterodorsal nucleus, caudal part") AnnotationAssertion(Annotation( "BIRNLEX:835") "nucleus dorso-caudalis") AnnotationAssertion(Annotation( "BIRNLEX:835") "nucleus dorsocaudalis (Hassler)") AnnotationAssertion(Annotation( "BIRNLEX:835") "nucleus lateralis posterior") AnnotationAssertion(Annotation( "BIRNLEX:835") "nucleus lateralis posterior thalami") AnnotationAssertion(Annotation( "BIRNLEX:835") "nucleus lateralis thalami posterior") AnnotationAssertion(Annotation( "FMA:62177") "posterior lateral nucleus of thalamus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BAMS:LP") "lateral posterior complex") AnnotationAssertion( "UBERON:0002983") AnnotationAssertion(rdfs:label "lateral posterior nucleus of thalamus") SubClassOf( ) SubClassOf(Annotation( "NIFSTD"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (lateral dorsal nucleus) AnnotationAssertion(Annotation( ) "The lateral dorsal nucleus is a nucleus of the thalamus. It acts in concert with the anterior nuclei of thalamus. It receives significant input from several subdivisions of visual cortex, and has a primary output to parietal cortex on the dorsolateral cortical convexity, giving it access to limbic forebrain nuclei important for emotion and behavior functions.") AnnotationAssertion(Annotation( "BIRNLEX:838") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "LD") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:LD") AnnotationAssertion( "BIRNLEX:838") AnnotationAssertion( "BM:Die-Th-LD") AnnotationAssertion( "BTO:0004349") AnnotationAssertion( "BTO:0004350") AnnotationAssertion( "DHBA:10396") AnnotationAssertion( "EV:0100211") AnnotationAssertion( "FMA:62176") AnnotationAssertion( "HBA:4399") AnnotationAssertion( "MBA:155") AnnotationAssertion(Annotation( "BIRNLEX:838") "UMLS:C0228342") AnnotationAssertion(Annotation( "BIRNLEX:838") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=326") AnnotationAssertion(Annotation( ) "dorsal thalamus, lateral group") AnnotationAssertion(Annotation( "FMA:62176") "lateral dorsal nucleus of thalamus") AnnotationAssertion(Annotation( "FMA:62176") "lateral dorsal thalamic nucleus") AnnotationAssertion(Annotation( "BIRNLEX:838") "laterodorsal nucleus nucleus of thalamus") AnnotationAssertion(Annotation( "BIRNLEX:838") "laterodorsal nucleus thalamic nucleus") AnnotationAssertion(Annotation( "FMA:62176") "laterodorsal nucleus, superficial part") AnnotationAssertion(Annotation( "FMA:62176") "laterodorsal thalamic nucleus") AnnotationAssertion(Annotation( "FMA:62176") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "nucleus dorsalis lateralis thalami") AnnotationAssertion(Annotation( "BIRNLEX:838") "nucleus dorsalis superficialis (Hassler)") AnnotationAssertion(Annotation( "BIRNLEX:838") "nucleus dorsolateralis thalami") AnnotationAssertion(Annotation( "BIRNLEX:838") "nucleus lateralis dorsalis") AnnotationAssertion(Annotation( "BIRNLEX:838") "nucleus lateralis dorsalis of thalamus") AnnotationAssertion(Annotation( "BIRNLEX:838") "nucleus lateralis dorsalis thalami") AnnotationAssertion(Annotation( "BIRNLEX:838") "nucleus lateralis thalami dorsalis") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:326") "lateral dorsal nucleus of the thalamus") AnnotationAssertion(Annotation( "HBA:DTLd") "lateral group of nuclei, dorsal division") AnnotationAssertion(Annotation( "NeuroNames:326") "laterodorsal nucleus of the thalamus") AnnotationAssertion( "UBERON:0002984") AnnotationAssertion(rdfs:label "lateral dorsal nucleus") SubClassOf( ) SubClassOf(Annotation( "NIFSTD"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (ventral nucleus of medial geniculate body) AnnotationAssertion(Annotation( "BIRNLEX:845") "Ventral division of medial geniculate body, first described by Morest (1964) in the cat, but found in primate, mouse and rat as well. It begins midway in the posterior third of the medial geniculate in the cat and is prominant anteriorly. The boundary between the dorsal and ventral divisions is demarcated in rat by a thick horizontally oriented axon bundle, the midgeniculate bundle (Webster, 1995, fig 16).") AnnotationAssertion(Annotation( "BIRNLEX:845") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "MGV") AnnotationAssertion(Annotation( "BIRNLEX:845") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "VMG") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:MGV") AnnotationAssertion( "BAMS:MGv") AnnotationAssertion( "BAMS:VMG") AnnotationAssertion( "BIRNLEX:845") AnnotationAssertion( "BM:Die-Th-MG-MGv") AnnotationAssertion( "BTO:0002671") AnnotationAssertion( "DHBA:10438") AnnotationAssertion( "FMA:62217") AnnotationAssertion( "HBA:4445") AnnotationAssertion( "MBA:1079") AnnotationAssertion(Annotation( "BIRNLEX:845") "UMLS:C0175295") AnnotationAssertion(Annotation( "BIRNLEX:845") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=357") AnnotationAssertion(Annotation( "FMA:62217") "medial geniculate complex, ventral part") AnnotationAssertion(Annotation( "FMA:62217") "medial geniculate nucleus, ventral part") AnnotationAssertion(Annotation( "BIRNLEX:845") "medial nucleus of medial geniculate complex") AnnotationAssertion(Annotation( "BIRNLEX:845") "nucleus corporis geniculati medialis, pars ventralis") AnnotationAssertion(Annotation( "FMA:62217") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "nucleus geniculatus medialis fasciculosis (Hassler)") AnnotationAssertion(Annotation( "BIRNLEX:845") "nucleus geniculatus medialis fasciculosus (Hassler)") AnnotationAssertion(Annotation( "BIRNLEX:845") "nucleus geniculatus medialis pars ventralis") AnnotationAssertion(Annotation( "FMA:62217") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "nucleus ventralis corporis geniculati medialis") AnnotationAssertion(Annotation( "FMA:62217") "ventral nucleus of medial geniculate complex") AnnotationAssertion(Annotation( "FMA:62217") "ventral principal nucleus of medial geniculate body") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BAMS:MGv") "medial geniculate complex ventral part") AnnotationAssertion(Annotation( "BAMS:MGv") "medial geniculate nucleus ventral part") AnnotationAssertion(Annotation( "NeuroNames:357") "ventral nucleus") AnnotationAssertion(Annotation( "NeuroNames:357") "ventral nucleus of the medial geniculate body") AnnotationAssertion( "UBERON:0002985") AnnotationAssertion(rdfs:label "ventral nucleus of medial geniculate body") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete neurofilament) AnnotationAssertion( "GO:0005883") AnnotationAssertion( "BIRNLEX:846") AnnotationAssertion( "FMA:63859") AnnotationAssertion( "NCIT:C13263") AnnotationAssertion( "NIF_Subcellular:sao1316272517") AnnotationAssertion( "UMLS:C0027834") AnnotationAssertion( "Wikipedia:Neurofilament") AnnotationAssertion(Annotation( "FMA:63859") "neuronal intermediate filament") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002986") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "obsolete neurofilament") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (anterior spinocerebellar tract) AnnotationAssertion(Annotation( "BIRNLEX:848") "Runs through the ventrolateral surface of the spinal cord. It enters the cerebellum through the superior cerebellar peduncle. It crosses the midline at the segmental level and recrosses in the cerebellum. Its terminals are distributed in the cerebellar anterior lobe, preferentially in the ipsilateral intermediate cortex. Rostrally, it extends to lobule II.") AnnotationAssertion(Annotation( ) "The ventral spinocerebellar tract conveys proprioceptive information from the body to the cerebellum. It is part of the somatosensory system and runs in parallel with the dorsal spinocerebellar tract. Both these tracts involve two neurons and end up on the same side of the body. The ventral tract (under L2/L3) gets its proprioceptive/fine touch/vibration information from a first order neuron, with its cell body in a dorsal ganglion. The axon runs via the fila radicularia to the dorsal horn of the grey matter. There it makes a synapse with the dendrites of two neurons: they send their axons bilaterally to the ventral border of the lateral funiculi. The ventral spinocerebellar tract then enters the cerebellum via the superior cerebellar peduncle. This is in contrast with the dorsal spinocerebellar tract (C8 - L2/L3), which only has 1 unilateral axon that has its cell body in the Clarke's nuclei (only at the level of C8 - L2/L3). The fibers of the ventral spinocerebellar tract then eventually enter the cerebellum via the superior cerebellar peduncle. This is one of the few afferent tracts through the superior cerebellar peduncle. Originates from ventral horn at lumbosacral spinal levels. Axons first cross midline in the spinal cord and run in the ventral border of the lateral funiculi. These axons ascend up to the pons where they join the superior cerebellar peduncle to enter the cerebellum. Once in the deep white matter of the cerebellum, the axons recross the midline, give off collaterals to the globose and emboliform nuclei, and terminate in the cortex of the anterior lobe and vermis of the posterior lobe. [WP,unvetted][Wikipedia:Ventral_spinocerebellar_tract].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:asc") AnnotationAssertion( "BAMS:sctv") AnnotationAssertion( "BAMS:vsc") AnnotationAssertion( "BIRNLEX:848") AnnotationAssertion( "DHBA:12801") AnnotationAssertion( "DMBA:17805") AnnotationAssertion( "FMA:72642") AnnotationAssertion( "MBA:866") AnnotationAssertion(Annotation( "BIRNLEX:848") "UMLS:C0175561") AnnotationAssertion(Annotation( "BIRNLEX:848") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=808") AnnotationAssertion(Annotation( "BIRNLEX:848") "Gower's tract") AnnotationAssertion(Annotation( "FMA:72642") "Gowers' tract") AnnotationAssertion(Annotation( "FMA:72642") "ventral spinocerebellar tract") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:808") Annotation( ) "tractus spinocerebellaris anterior") AnnotationAssertion(Annotation( "NeuroNames:808") Annotation( ) "tractus spinocerebellaris ventralis") AnnotationAssertion(Annotation( "NeuroNames:808") "ventral spinocerebellar tract (Gowers)") AnnotationAssertion( "UBERON:0002987") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "anterior spinocerebellar tract") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/b/b2/Spinal_cord_tracts_-_English.svg"^^xsd:anyURI) AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/f/fe/Medulla_spinalis_-_tracts_-_English.svg"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (first dorsal interosseous of manus) AnnotationAssertion( ) AnnotationAssertion( "FMA:37424") AnnotationAssertion(Annotation( "FMA:37424") "abductor indicis") AnnotationAssertion(Annotation( "FMA:37424") "first dorsal interosseous of hand") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:37424") "first dorsal interosseous muscle of hand") AnnotationAssertion( "UBERON:0002988") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "first dorsal interosseous of manus") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (anconeus muscle) AnnotationAssertion(Annotation( ) "A small muscle on the posterior aspect of the elbow joint.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010714") AnnotationAssertion( "EMAPA:36181") AnnotationAssertion( "FMA:37704") AnnotationAssertion(Annotation( ) "anconeus") AnnotationAssertion(Annotation( "AAO:0010714") "m. anconeus") AnnotationAssertion(Annotation( ) Annotation( ) "musculus anconaeus") AnnotationAssertion(Annotation( ) Annotation( ) "musculus anconeus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "EMAPA:36181") "aconeus") AnnotationAssertion( "UBERON:0002989") AnnotationAssertion(rdfs:comment "Some consider anconeus to be a continuation of the triceps brachii muscle. Some sources consider it to be part of the posterior compartment of the arm, while others consider it part of the posterior compartment of the forearm.") AnnotationAssertion(rdfs:label "anconeus muscle") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/7/77/Gray1232.png"^^xsd:anyURI) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf(Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "lateral epicondyle of the humerus proximally") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "lateral surface of the olecranon process and the superior part of the posterior ulna distally") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (mammillothalamic tract of hypothalamus) AnnotationAssertion(Annotation( "BIRNLEX:855") "Part of mammillothalamic tract contained within the hypothalamus.") AnnotationAssertion(Annotation( "BIRNLEX:855") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "MTHH") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:mthh") AnnotationAssertion( "BIRNLEX:855") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37904") AnnotationAssertion( "FMA:62059") AnnotationAssertion(Annotation( "BIRNLEX:855") "UMLS:C0228375") AnnotationAssertion(Annotation( "BIRNLEX:855") "UMLS:C1289566") AnnotationAssertion(Annotation( "BIRNLEX:855") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=424") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:424") Annotation( ) "fasciculus mamillothalamicus (hypothalami)") AnnotationAssertion(Annotation( "NeuroNames:424") "mammillothalamic tract of the hypothalamus") AnnotationAssertion( "UBERON:0002990") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "mammillothalamic tract of hypothalamus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (supramammillary commissure) AnnotationAssertion(Annotation( "BIRNLEX:859") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "SUMX") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:smd") AnnotationAssertion( "BAMS:sumx") AnnotationAssertion( "BIRNLEX:859") AnnotationAssertion( "FMA:62056") AnnotationAssertion( "MBA:341") AnnotationAssertion(Annotation( "BIRNLEX:859") "UMLS:C0228379") AnnotationAssertion(Annotation( "BIRNLEX:859") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=421") AnnotationAssertion( "commissure of forel") AnnotationAssertion(Annotation( "FMA:62056") "commissure y") AnnotationAssertion(Annotation( "FMA:62056") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "decussation supramamilaris") AnnotationAssertion(Annotation( "FMA:62056") "postmammillary decussation") AnnotationAssertion(Annotation( "FMA:62056") "supramammillary decussation") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:421") Annotation( ) "commissura supramamillaris") AnnotationAssertion(Annotation( "NeuroNames:421") Annotation( ) "commissura supramammillaris") AnnotationAssertion(Annotation( "FMA:62056") "commissure supramammillary") AnnotationAssertion(Annotation( "NeuroNames:421") Annotation( ) "decussation supramamillaris") AnnotationAssertion( "UBERON:0002991") AnnotationAssertion(rdfs:label "supramammillary commissure") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (paratenial nucleus) AnnotationAssertion(Annotation( "BTO:0002457") "One of the median nuclei of the thalamus, situated ventral and medial to the stria medullaris.") AnnotationAssertion(Annotation( "BIRNLEX:860") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "PT") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:PT") AnnotationAssertion( "BIRNLEX:860") AnnotationAssertion( "BTO:0002457") AnnotationAssertion( "DHBA:10404") AnnotationAssertion( "DMBA:16410") AnnotationAssertion( "FMA:62151") AnnotationAssertion( "HBA:4405") AnnotationAssertion( "MBA:15") AnnotationAssertion(Annotation( "BIRNLEX:860") "UMLS:C0175252") AnnotationAssertion(Annotation( "BIRNLEX:860") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=307") AnnotationAssertion(Annotation( "BTO:0002457") "nucleus parataenialis") AnnotationAssertion(Annotation( "FMA:62151") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "nucleus parataenialis") AnnotationAssertion(Annotation( "FMA:62151") "parataenial nucleus") AnnotationAssertion(Annotation( "FMA:62151") "paratenial thalamic nucleus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:307") Annotation( ) "nuclei parataeniales thalami") AnnotationAssertion(Annotation( "NeuroNames:307") Annotation( ) "nucleus parataenialis (Hassler)") AnnotationAssertion(Annotation( "BTO:0002457") "nucleus parataenialis thalami") AnnotationAssertion(Annotation( "NeuroNames:307") Annotation( ) "nucleus paratenialis thalami") AnnotationAssertion(Annotation( "BTO:0002457") "paratenial nucleus of thalamus") AnnotationAssertion(Annotation( "NeuroNames:307") "paratenial nucleus of the thalamus") AnnotationAssertion( "UBERON:0002992") AnnotationAssertion(rdfs:label "paratenial nucleus") SubClassOf( ) SubClassOf(Annotation( "ABA"^^xsd:string) Annotation( "FMA"^^xsd:string) Annotation( "NIF"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (inferior central nucleus) AnnotationAssertion( "TODO - compare with UBERON:0002881 ! sublingual nucleus; also to dorsal raphe nucleus. Check if the same as ZFA 'inferior raphe nucleus'. See comments on https://sourceforge.net/tracker/?func=detail&atid=440764&aid=3248146&group_id=36855") AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:861") AnnotationAssertion( "FMA:72466") AnnotationAssertion(Annotation( "FMA:72466") "inferior central nucleus (of roller)") AnnotationAssertion(Annotation( "FMA:72466") "inferior central nucleus of raphe") AnnotationAssertion(Annotation( "FMA:72466") "inferior central tegmental nucleus") AnnotationAssertion(Annotation( "FMA:72466") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "nucleus centralis inferior") AnnotationAssertion(Annotation( "FMA:72466") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "nucleus tegmentalis centralis inferior") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002993") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "inferior central nucleus") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (substantia nigra pars lateralis) AnnotationAssertion(Annotation( "NIF"^^xsd:string) "WP says 'Sometimes, a third region, the pars lateralis, is mentioned, though it is usually classified as part of the pars reticulata' -- NIFSTD makes this a part of but MBA has reticulata and lateralis as disjoit") AnnotationAssertion( ) AnnotationAssertion( "ABA:SNI") AnnotationAssertion( "BAMS:SNL") AnnotationAssertion( "BAMS:SNl") AnnotationAssertion( "BIRNLEX:866") AnnotationAssertion( "DHBA:12257") AnnotationAssertion( "EMAPA:35837") AnnotationAssertion( "FMA:76844") AnnotationAssertion( "MA:0001065") AnnotationAssertion( "MBA:615") AnnotationAssertion(Annotation( "BIRNLEX:866") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=198") AnnotationAssertion(Annotation( "FMA:76844") "lateral part of substantia nigra") AnnotationAssertion(Annotation( "BIRNLEX:866") "pars lateralis") AnnotationAssertion(Annotation( "FMA:76844") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "pars lateralis substantiae nigrae") AnnotationAssertion(Annotation( "ABA:SNI") "substantia nigra, lateral part") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:198") "internal capsule (Burdach)") AnnotationAssertion(Annotation( "BAMS:SNL") Annotation( "BAMS:SNl") "substantia nigra lateral part") AnnotationAssertion(Annotation( "BAMS:SNL") "substantia nigra, lateral division") AnnotationAssertion(Annotation( "BAMS:SNL") "substantia nigra, pars lateralis") AnnotationAssertion( "UBERON:0002995") AnnotationAssertion(rdfs:label "substantia nigra pars lateralis") SubClassOf( ) SubClassOf(Annotation( "MA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (nucleus of optic tract) AnnotationAssertion(Annotation( "BIRNLEX:868") "Predominantly gray matter structure consisting of large multipoloar cells lying aong axons of the brachium of the superior colliculus, lyaing adjaent to the dorsal terminal nucleus of the accessory optic system. In several species, cells of this nucleus receive input from the contralateral retina (Sefton and Dreher in Paxinos, G. The rat nervous system, 1995, pg. 862).") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:NOT") AnnotationAssertion( "BAMS:OTN") AnnotationAssertion( "BIRNLEX:868") AnnotationAssertion( "FMA:72403") AnnotationAssertion( "HBA:9080") AnnotationAssertion( "MBA:628") AnnotationAssertion(Annotation( "BIRNLEX:868") "UMLS:C0175356") AnnotationAssertion(Annotation( "BIRNLEX:868") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=470") AnnotationAssertion(Annotation( "FMA:72403") "large-celled nucleus of optic tract") AnnotationAssertion(Annotation( "FMA:72403") "lentiform nucleus of pretectal area") AnnotationAssertion(Annotation( "BIRNLEX:868") "nucleus of the optic tract") AnnotationAssertion(Annotation( "FMA:72403") "optic tract nucleus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:470") Annotation( ) "nucleus magnocellularis tractus optici") AnnotationAssertion(Annotation( "NeuroNames:470") Annotation( ) "nucleus tractus optici") AnnotationAssertion( "UBERON:0002996") AnnotationAssertion(rdfs:label "nucleus of optic tract") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ) # Class: (nucleus of medial eminence) AnnotationAssertion( ) AnnotationAssertion( "BAMS:MeE") AnnotationAssertion( "BIRNLEX:870") AnnotationAssertion( "FMA:72467") AnnotationAssertion(Annotation( "FMA:72467") "medial eminence nucleus") AnnotationAssertion(Annotation( "FMA:72467") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "nucleus eminentiae teretis") AnnotationAssertion(Annotation( "FMA:72467") "nucleus of eminentia teres") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0002997") AnnotationAssertion(rdfs:label "nucleus of medial eminence") SubClassOf( ) # Class: (inferior frontal gyrus) AnnotationAssertion(Annotation( "BIRNLEX:873") "Component of the frontal lobe, lateral aspect. The rostral boundary is the first appearance of the inferior frontal sulcus whereas the caudal boundary is the precentral gyrus. The medial and lateral boundaries are the lateral bank of the inferior frontal sulcus and the medial bank of the lateral orbital sulcus and/or the circular insular sulcus respectively (Christein Fennema-Notestine).") AnnotationAssertion(Annotation( "ncit"^^xsd:string) "ncit has two classes, but these are exact synonyms in FMA") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:IFG") AnnotationAssertion( "BIRNLEX:873") AnnotationAssertion( "BTO:0004835") AnnotationAssertion( "DHBA:12117") AnnotationAssertion( "FMA:61860") AnnotationAssertion( "HBA:4035") AnnotationAssertion( "NCIT:C32774") AnnotationAssertion(Annotation( "BIRNLEX:873") "UMLS:C0152298") AnnotationAssertion(Annotation( "ncithesaurus:Inferior_Frontal_Convolution") "UMLS:C0152298") AnnotationAssertion(Annotation( "BIRNLEX:873") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=85") AnnotationAssertion( "ncithesaurus:Inferior_Frontal_Gyrus") AnnotationAssertion(Annotation( "FMA:61860") "inferior frontal convolution") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:85") Annotation( ) "gyrus F3") AnnotationAssertion(Annotation( ) Annotation( ) "gyrus frontalis inferior") AnnotationAssertion(Annotation( "NeuroNames:85") Annotation( ) "gyrus frontalis tertius") AnnotationAssertion(Annotation( "NeuroNames:85") Annotation( ) "regio subfrontalis") AnnotationAssertion( "UBERON:0002998") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "inferior frontal gyrus") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/d/d7/Inferior_frontal_gyrus.png"^^xsd:anyURI) SubClassOf( ) # Class: (oral pontine reticular nucleus) AnnotationAssertion(Annotation( ) "The oral pontine reticular nucleus is delineated from its caudal brother, with which it shares its first three names. This nucleus tapers into the lower mesencephalic reticular formation and contains sporadic giant cells. Different populations of the pontis oralis have displayed discharge patterns which coordinate with phasic movements to and from paradoxical sleep. From this information it has been implied that the n.r. pontis oralis is involved in the mediation of changing to and from REM sleep. [WP,unvetted].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:PRNr") AnnotationAssertion( "BAMS:PnO") AnnotationAssertion( "BIRNLEX:875") AnnotationAssertion( "DHBA:12494") AnnotationAssertion( "FMA:72468") AnnotationAssertion( "HBA:9166") AnnotationAssertion( "MBA:552") AnnotationAssertion(Annotation( "FMA:72468") "pontine reticular nucleus, rostral part") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "nucleus reticularis pontis oralis") AnnotationAssertion(Annotation( "BAMS:PRNr") "pontine reticular nucleus rostral part") AnnotationAssertion(Annotation( "BAMS:PnO") "pontine reticular nucleus, oral part") AnnotationAssertion( "UBERON:0002999") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "oral pontine reticular nucleus") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (obsolete intermediate filament) AnnotationAssertion( "GO:0005882") AnnotationAssertion( "BIRNLEX:879") AnnotationAssertion( "FMA:63851") AnnotationAssertion( "GAID:1079") AnnotationAssertion( "MESH:A11.284.195.190.750.410") AnnotationAssertion( "NCIT:C13248") AnnotationAssertion( "NIF_Subcellular:sao952483289") AnnotationAssertion( "UMLS:C0021770") AnnotationAssertion( "Wikipedia:Intermediate_filament") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003000") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "obsolete intermediate filament") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (nervous system lemniscus) AnnotationAssertion(Annotation( ) Annotation( "BIRNLEX:881") "A bundle or band of sensory nerve fibers.") AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:881") AnnotationAssertion( "FMA:83676") AnnotationAssertion(Annotation( "BIRNLEX:881") Annotation( "FMA:83676") "lemniscus") AnnotationAssertion(Annotation( "FMA:83676") "neuraxis lemniscus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003001") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "nervous system lemniscus") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (medial lemniscus) AnnotationAssertion(Annotation( "BIRNLEX:887") "Fiber tract arising predominantly from neurons in the nucleus gracilis and nucleus cuneatus in the medulla, projecting to thalamus. Fibers cross in the decussation of the medial lemniscus.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:MEL") AnnotationAssertion( "BAMS:ml") AnnotationAssertion( "BIRNLEX:887") AnnotationAssertion( "BM:LM") AnnotationAssertion( "DHBA:12763") AnnotationAssertion( "DMBA:17776") AnnotationAssertion( "FMA:83675") AnnotationAssertion( "HBA:12961") AnnotationAssertion( "MBA:697") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "Reil's band") AnnotationAssertion(Annotation( ) "Reil's ribbon") AnnotationAssertion(Annotation( ) Annotation( ) "lemniscus medialis") AnnotationAssertion( "UBERON:0003002") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "medial lemniscus") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/6/66/Gray759.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete microfilament) AnnotationAssertion( "FMA:63850") AnnotationAssertion( "GAID:1080") AnnotationAssertion( "GO:0005884") AnnotationAssertion( "MESH:A11.284.195.190.750.510") AnnotationAssertion( "NCIT:C13255") AnnotationAssertion( "NIF_Subcellular:sao2006047981") AnnotationAssertion(Annotation( "ncithesaurus:Actin_Filament") "UMLS:C0025979") AnnotationAssertion( "Wikipedia:Microfilament") AnnotationAssertion(Annotation( "FMA:63850") "actin filament") AnnotationAssertion(Annotation( "FMA:63850") "microfilament") AnnotationAssertion(Annotation( "FMA:63850") "microfilamentum") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003003") AnnotationAssertion(rdfs:label "obsolete microfilament") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (median raphe nucleus) AnnotationAssertion(Annotation( ) Annotation( ) "The median raphe nucleus (or superior central nucleus) is composed of polygonal, fusiform and pyriform neurons and exists rostral to the nucleus raphe pontis. One trait of the MRN is its inhibition by lysergic acid diethylamide and psilocin, two serotonin antagonist hallucinogens. The inactivation of the nucleus centralis superior via LSD produces a dose dependent inactivation in the MRN, but not in the raphe pallidus[WP,unvetted].") AnnotationAssertion(Annotation( ) "TODO - The term medial raphe nucleus refers to a composite structure that consists of the superior central nucleus and the inferior central nucleus of the pontine reticular formation ( Carpenter-1983 )") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:MnR") AnnotationAssertion( "BIRNLEX:889") AnnotationAssertion( "BM:MR") AnnotationAssertion( "DHBA:12235") AnnotationAssertion( "EMAPA:35551") AnnotationAssertion( "FMA:72465") AnnotationAssertion( "MBA:679") AnnotationAssertion( "MRN") AnnotationAssertion( "cell group b8") AnnotationAssertion( "medial raphe nucleus") AnnotationAssertion(Annotation( "FMA:72465") "median nucleus of the raphe") AnnotationAssertion(Annotation( "FMA:72465") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "nucleus raphes medianus") AnnotationAssertion(Annotation( "FMA:72465") "superior central nucleus") AnnotationAssertion(Annotation( "FMA:72465") "superior central nucleus raphe") AnnotationAssertion(Annotation( "FMA:72465") "superior central tegmental nucleus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "nucleus centralis superior") AnnotationAssertion( "UBERON:0003004") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "median raphe nucleus") SubClassOf( ) SubClassOf(Annotation( "Wikipedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (dorsal longitudinal fasciculus of midbrain) AnnotationAssertion(Annotation( "BIRNLEX:893") "Part of dorsal longitudinal fasciculus located in the midbrain tegmentum.") AnnotationAssertion(Annotation( "BIRNLEX:893") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "DLFMB") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:dlfmb") AnnotationAssertion( "BIRNLEX:893") AnnotationAssertion( "FMA:72453") AnnotationAssertion(Annotation( "BIRNLEX:893") "UMLS:C0262222") AnnotationAssertion(Annotation( "BIRNLEX:893") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=525") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bundle of Schutz of midbrain") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "fasciculus of Schutz of midbrain") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "midbrain bundle of Schutz") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "midbrain dorsal longitudinal fasciculus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "midbrain fasciculus of Schutz") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "midbrain posterior longitudinal fasciculus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "posterior longitudinal fasciculus of midbrain") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:525") "dorsal longitudinal fasciculus of the midbrain") AnnotationAssertion(Annotation( "NeuroNames:525") Annotation( ) "fasciculus longitudinalis dorsalis (mesencephali)") AnnotationAssertion( "UBERON:0003005") AnnotationAssertion(rdfs:label "dorsal longitudinal fasciculus of midbrain") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "NIFSTD"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (dorsal nucleus of lateral lemniscus) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:DLL") AnnotationAssertion( "BAMS:NLLd") AnnotationAssertion( "BIRNLEX:894") AnnotationAssertion( "BM:LLD") AnnotationAssertion( "DHBA:12455") AnnotationAssertion( "DMBA:16860") AnnotationAssertion( "FMA:72483") AnnotationAssertion( "HBA:9139") AnnotationAssertion( "MBA:82") AnnotationAssertion(Annotation( "BIRNLEX:894") "UMLS:C0175443") AnnotationAssertion(Annotation( "BIRNLEX:894") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=591") AnnotationAssertion(Annotation( "FMA:72483") "dorsal nucleus of the lateral lemniscus") AnnotationAssertion(Annotation( "ABA:NLLd") "nucleus of the lateral lemniscus, dorsal part") AnnotationAssertion(Annotation( "FMA:72483") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "nucleus posterior lemnisci lateralis") AnnotationAssertion(Annotation( "FMA:72483") "posterior nucleus of lateral lemniscus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:591") Annotation( ) "nucleus lemnisci lateralis dorsalis") AnnotationAssertion(Annotation( "NeuroNames:591") Annotation( ) "nucleus lemnisci lateralis pars dorsalis") AnnotationAssertion(Annotation( "BAMS:NLLd") "nucleus of the lateral lemniscus dorsal part") AnnotationAssertion( "UBERON:0003006") AnnotationAssertion(rdfs:label "dorsal nucleus of lateral lemniscus") SubClassOf( ) # Class: (lateral parabrachial nucleus) AnnotationAssertion(Annotation( ) "The lateral parabrachial nucleus induces thirst by stimulating the median preoptic nucleus. It gets its name from its location relative to the superior cerebellar peduncles, which is also known as the 'brachia conjunctiva'. [WP,unvetted].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:LPB") AnnotationAssertion( "BIRNLEX:897") AnnotationAssertion( "DHBA:12482") AnnotationAssertion( "DMBA:16852") AnnotationAssertion( "FMA:72481") AnnotationAssertion( "HBA:9145") AnnotationAssertion( "MBA:881") AnnotationAssertion(Annotation( "BIRNLEX:897") "UMLS:C0175445") AnnotationAssertion(Annotation( "BIRNLEX:897") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=588") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:588") Annotation( ) "nucleus parabrachialis lateralis") AnnotationAssertion(Annotation( "NeuroNames:588") "parabrachial nucleus, lateral division") AnnotationAssertion( "UBERON:0003007") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "lateral parabrachial nucleus") SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (dorsal longitudinal fasciculus of hypothalamus) AnnotationAssertion(Annotation( "BIRNLEX:898") "Part of dorsal longitudinal fasciculus located within the hypothalamus.") AnnotationAssertion(Annotation( "FMA"^^xsd:string) "classified as tract in FMA") AnnotationAssertion(Annotation( "BIRNLEX:898") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "DLFH") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:dlfh") AnnotationAssertion( "BIRNLEX:898") AnnotationAssertion( "FMA:62063") AnnotationAssertion(Annotation( "BIRNLEX:898") "UMLS:C0262221") AnnotationAssertion(Annotation( "BIRNLEX:898") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=432") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:432") "dorsal longitudinal fasciculus of the hypothalamus") AnnotationAssertion(Annotation( "NeuroNames:432") Annotation( ) "fasciculus longitudinalis dorsalis (hypothalami)") AnnotationAssertion( "UBERON:0003008") AnnotationAssertion(rdfs:label "dorsal longitudinal fasciculus of hypothalamus") SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "NIFSTD"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (dorsal tegmental decussation) AnnotationAssertion(Annotation( "BIRNLEX:901") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "DTGX") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:dtd") AnnotationAssertion( "BAMS:dtgx") AnnotationAssertion( "BIRNLEX:901") AnnotationAssertion( "DHBA:12340") AnnotationAssertion( "FMA:72451") AnnotationAssertion(Annotation( "BIRNLEX:901") "UMLS:C0152370") AnnotationAssertion(Annotation( "BIRNLEX:901") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=523") AnnotationAssertion(Annotation( "FMA:72451") "Meynert's decussation") AnnotationAssertion(Annotation( "FMA:72451") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "decussatio tegmentalis posterior") AnnotationAssertion(Annotation( "FMA:72451") "dorsal fountain decussation") AnnotationAssertion( "fountain decussation of Meynert") AnnotationAssertion(Annotation( "FMA:72451") "posterior tegmental decussation") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:523") Annotation( ) "chiasma fibrorum proprium tecti") AnnotationAssertion(Annotation( "NeuroNames:523") Annotation( ) "decussatio dorsalis tegmenti") AnnotationAssertion(Annotation( "NeuroNames:523") Annotation( ) "decussatio fibrorum medialium tecti") AnnotationAssertion(Annotation( "NeuroNames:523") Annotation( ) "decussatio tegmentalis dorsalis (Meynert)") AnnotationAssertion(Annotation( "NeuroNames:523") Annotation( ) "decussationes tegmentales") AnnotationAssertion(Annotation( "NeuroNames:523") Annotation( ) "decussationes tegmenti") AnnotationAssertion(Annotation( "NeuroNames:523") "dorsal tegmental decussation (Meynert)") AnnotationAssertion( "UBERON:0003009") AnnotationAssertion(rdfs:label "dorsal tegmental decussation") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (lateral pes lemniscus) AnnotationAssertion(Annotation( "BIRNLEX:902") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "LPL") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:lpl") AnnotationAssertion( "BIRNLEX:902") AnnotationAssertion( "FMA:72459") AnnotationAssertion(Annotation( "BIRNLEX:902") "UMLS:C0175409") AnnotationAssertion(Annotation( "BIRNLEX:902") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=531") AnnotationAssertion(Annotation( "FMA:72459") "deep pes lemniscus") AnnotationAssertion(Annotation( "FMA:72459") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "fussschleife") AnnotationAssertion(Annotation( "FMA:72459") "lateral pontine bundle") AnnotationAssertion( "laterale haubenfussschleife") AnnotationAssertion( "laterale pontine buendel") AnnotationAssertion(Annotation( "FMA:72459") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "pes lemniscus profond") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:531") Annotation( ) "fasciculi laterales pontis") AnnotationAssertion(Annotation( "NeuroNames:531") Annotation( ) "pes lemnisci profundus") AnnotationAssertion(Annotation( "NeuroNames:531") Annotation( ) "pes lemniscus lateralis") AnnotationAssertion( "UBERON:0003010") AnnotationAssertion(rdfs:label "lateral pes lemniscus") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (facial motor nucleus) AnnotationAssertion(Annotation( "BIRNLEX:903") "Nucleus located in the pontine tegmentum containing motor neurons that innervate the muscles of the face. Some neurons that project to the cerebellum have also been identified in some species.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:7") AnnotationAssertion( "BAMS:VII") AnnotationAssertion( "BIRNLEX:903") AnnotationAssertion( "DMBA:17317") AnnotationAssertion( "FMA:54582") AnnotationAssertion( "HBA:9142") AnnotationAssertion( "MBA:661") AnnotationAssertion( "TAO:0000206") AnnotationAssertion(Annotation( "BIRNLEX:903") "UMLS:C0175442") AnnotationAssertion( "ZFA:0000206") AnnotationAssertion(Annotation( "BIRNLEX:903") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=586") AnnotationAssertion(Annotation( "FMA:54582") "branchiomotor nucleus of facial nerve") AnnotationAssertion(Annotation( "FMA:54582") "facial motor nucleus") AnnotationAssertion(Annotation( "ZFA:0000206") "facial nerve motor nucleus") AnnotationAssertion(Annotation( "ZFA:0000206") "motor nucleus VII") AnnotationAssertion(Annotation( "FMA:54582") "motor nucleus of VII") AnnotationAssertion(Annotation( "FMA:54582") "motor nucleus of facial nerve") AnnotationAssertion(Annotation( "ZFA:0000206") "nVII") AnnotationAssertion(Annotation( "ZFA:0000206") "nucleus motorius nervi facialis") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "facial nucleus") AnnotationAssertion(Annotation( ) Annotation( ) "n. nervi facialis") AnnotationAssertion(Annotation( "NeuroNames:586") Annotation( ) "nucleus facialis") AnnotationAssertion(Annotation( "NeuroNames:586") Annotation( ) "nucleus nervi facialis") AnnotationAssertion( "UBERON:0003011") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "see comments for facial nucleus. also check ZFA/pons") AnnotationAssertion(rdfs:label "facial motor nucleus") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/6/6b/Gray788.png"^^xsd:anyURI) SubClassOf( ) # Class: (flocculonodular lobe) AnnotationAssertion(Annotation( ) "The flocculonodular lobe is a lobe of the cerebellum consisting of the nodule and the flocculus. It is closely associated with the vestibulocerebellum. [WP,unvetted].") AnnotationAssertion( "receives input from the inferior and medial vestibular nuclei and sends fibers back to the vestibular nuclei, and processes and integrates these signals to allow for the constant maintenance of balance [MP:0009961]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:FNL") AnnotationAssertion( "BIRNLEX:904") AnnotationAssertion( "DHBA:12852") AnnotationAssertion( "EV:0100297") AnnotationAssertion( "FMA:72253") AnnotationAssertion( "HBA:12944") AnnotationAssertion( "MA:0002965") AnnotationAssertion(Annotation( "MA:0002965") "cerebellum flocculonodular lobe") AnnotationAssertion(Annotation( "FMA:72253") "flocculonodular lobe") AnnotationAssertion(Annotation( "FMA:72253") "flocculonodular lobe of cerebellum") AnnotationAssertion(Annotation( "FMA:72253") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "lobus flocculonodularis") AnnotationAssertion(Annotation( "FMA:72253") "posterior lobe-2 of cerebellum") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003012") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "flocculonodular lobe") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/4/43/CerebellumDiv.png"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "Wikipedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (alar central lobule) AnnotationAssertion(Annotation( ) "The lobulus centralis is a small square lobule, situated in the anterior cerebellar notch. It overlaps the lingula, from which it is separated by the precentral fissure; laterally, it extends along the upper and anterior part of each hemisphere, where it forms a wing-like prolongation, the alar central lobule. [WP,unvetted].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:ACL") AnnotationAssertion( "BIRNLEX:907") AnnotationAssertion( "FMA:72517") AnnotationAssertion(Annotation( "FMA:72517") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "ala centralis") AnnotationAssertion(Annotation( "FMA:72517") "alae of central lobule") AnnotationAssertion(Annotation( "FMA:72517") "lobules II, III of vermis") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "ala lobuli centralis") AnnotationAssertion(Annotation( "FMA:72517") "lobule II and III of hemisphere of cerebellum") AnnotationAssertion( "UBERON:0003013") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "alar central lobule") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/8/8d/Gray702.png"^^xsd:anyURI) SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (anterior quadrangular lobule) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:AQL") AnnotationAssertion( "BIRNLEX:913") AnnotationAssertion( "FMA:72516") AnnotationAssertion(Annotation( "FMA:72516") "anterior crescentic lobule of cerebellum") AnnotationAssertion(Annotation( "FMA:72516") "anterior quadrangular lobule of cerebellum") AnnotationAssertion(Annotation( "FMA:72516") "anterior quadrangular lobule of cerebellum [H IV et V]") AnnotationAssertion(Annotation( "FMA:72516") "anterior semilunar lobule") AnnotationAssertion(Annotation( "FMA:72516") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "lobulus quadrangularis (pars rostralis)") AnnotationAssertion(Annotation( "FMA:72516") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "lobulus quadrangularis anterior cerebelli [h iv et v]") AnnotationAssertion(Annotation( "FMA:72516") "semilunar lobule-1 (anterior)") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003015") AnnotationAssertion(rdfs:label "anterior quadrangular lobule") SubClassOf( ) DisjointClasses(Annotation( "lexical"^^xsd:string) ) # Class: (postcommissural fornix of brain) AnnotationAssertion(Annotation( ) Annotation( ) "The posterior fibers of the fornix, which continue through the hypothalamus to the mammillary bodies; then to the anterior nuclei of thalamus, which project to the cingulate cortex.") AnnotationAssertion(Annotation( "BIRNLEX:914") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "POFX") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:fxpo") AnnotationAssertion( "BAMS:pofx") AnnotationAssertion( "BIRNLEX:914") AnnotationAssertion( "FMA:62062") AnnotationAssertion( "MBA:737") AnnotationAssertion(Annotation( "BIRNLEX:914") "UMLS:C0175340") AnnotationAssertion(Annotation( "BIRNLEX:914") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=431") AnnotationAssertion(Annotation( "FMA:62062") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "fornix (entering Corpus mamillare)") AnnotationAssertion(Annotation( "FMA:62062") "postcommissural fornix") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:431") Annotation( ) "columna posterior fornicis") AnnotationAssertion(Annotation( "NeuroNames:431") Annotation( ) "fornix postcommissuralis") AnnotationAssertion( "UBERON:0003016") AnnotationAssertion(rdfs:label "postcommissural fornix of brain") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (substantia innominata) AnnotationAssertion(Annotation( "BIRNLEX:915") "A predominantly gray matter structure of the basal telencephalon defined on the basis of Nissl stain. Caudal to the anterior commissure it lies deep to the globus pallidus and dorsal to the amygdala. Rostral to the anterior commissure it lies deep to the striatum. The more rostral portion contains the basal forebrain nucleus ( Anthoney-1994 ). In the late twentieth century the region containing the substantia innominata was resegmented on the basis of neurochemistry and connectivity to constitute the striatopallidal system ( Heimer-1995 ). In this scheme the caudal portion of substantia innominata is located largely in the ventral pallidum and the rostral portion in the ventral striatum. (from Brain Info).") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:SI") AnnotationAssertion( "BIRNLEX:915") AnnotationAssertion( "BM:Tel-SI") AnnotationAssertion( "BTO:0002447") AnnotationAssertion( "DHBA:13034") AnnotationAssertion( "FMA:61885") AnnotationAssertion( "GAID:638") AnnotationAssertion( "HBA:13003") AnnotationAssertion( "MBA:342") AnnotationAssertion( "MESH:A08.186.211.577.820") AnnotationAssertion(Annotation( "BIRNLEX:915") "UMLS:C0038589") AnnotationAssertion(Annotation( "BIRNLEX:915") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=274") AnnotationAssertion(Annotation( "FMA:61885") "innominate substance") AnnotationAssertion(Annotation( "FMA:61885") "nucleus of substantia innominata") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:274") "substantia innominata (Reil, Reichert)") AnnotationAssertion(Annotation( "NeuroNames:274") Annotation( ) "substantia innominata of Meynert") AnnotationAssertion(Annotation( "BTO:0002447") "substantia innominata of Reichert") AnnotationAssertion(Annotation( "BTO:0002447") "substantia innominata of Reil") AnnotationAssertion(Annotation( "NeuroNames:274") "substriatal gray") AnnotationAssertion( "UBERON:0003017") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "substantia innominata") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/3/36/Substantia_innominata_MRI.PNG"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "ABA"^^xsd:string) ObjectSomeValuesFrom( )) DisjointClasses(Annotation( "NIFSTD"^^xsd:string) ) # Class: (parvicellular part of ventral posteromedial nucleus) AnnotationAssertion(Annotation( "BIRNLEX:917") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "VPMPC") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:Gus") AnnotationAssertion( "BAMS:VPMPC") AnnotationAssertion( "BAMS:VPMpc") AnnotationAssertion( "BIRNLEX:917") AnnotationAssertion( "DHBA:146034766") AnnotationAssertion( "FMA:62207") AnnotationAssertion( "MBA:741") AnnotationAssertion(Annotation( "BIRNLEX:917") "UMLS:C0175290") AnnotationAssertion(Annotation( "BIRNLEX:917") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=349") AnnotationAssertion(Annotation( "BIRNLEX:917") "gustatory nucleus (thalamus)") AnnotationAssertion(Annotation( "FMA:62207") "gustatory thalamic nucleus") AnnotationAssertion(Annotation( "BIRNLEX:917") "nucleus ventralis posterior medialis thalami, pars parvicellularis") AnnotationAssertion(Annotation( "FMA:62207") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "pars parvicellularis nuclei ventralis posteromedialis thalami") AnnotationAssertion(Annotation( "FMA:62207") "parvicellular part of ventral posteromedial nucleus of thalamus") AnnotationAssertion(Annotation( "FMA:62207") "ventral posteromedial nucleus of thalamus, parvicellular part") AnnotationAssertion(Annotation( "FMA:62207") "ventral posteromedial nucleus, parvocellular part") AnnotationAssertion(Annotation( "FMA:62207") "ventral posteromedial thalamic nucleus, parvicellular part") AnnotationAssertion(Annotation( "BIRNLEX:917") "ventroposteromedial nucleus of the thalamus, parvicellular part") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:349") Annotation( ) "nucleus ventralis posterior medialis, pars parvocellularis") AnnotationAssertion(Annotation( "NeuroNames:349") "parvicellular part of the ventral posteromedial nucleus") AnnotationAssertion(Annotation( "NeuroNames:349") "thalamic gustatory area") AnnotationAssertion(Annotation( "NeuroNames:349") "thalamic gustatory relay") AnnotationAssertion(Annotation( "NeuroNames:349") "thalamic taste relay") AnnotationAssertion(Annotation( "NeuroNames:349") "ventral posteromedial nucleus of the thalamus parvicellular part") AnnotationAssertion(Annotation( "BAMS:VPMpc") "ventral posteromedial nucleus of the thalamus, parvicellular part") AnnotationAssertion(Annotation( "BAMS:VPMPC") "ventroposterior medial thalamic nucleus, parvocellular part") AnnotationAssertion(Annotation( "BAMS:VPMpc") "ventroposteromedial nucleus of the thalamus parvicellular part") AnnotationAssertion( "UBERON:0003018") AnnotationAssertion(rdfs:label "parvicellular part of ventral posteromedial nucleus") SubClassOf( ) SubClassOf(Annotation( "NIFSTD"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (oral part of ventral posterolateral nucleus) AnnotationAssertion(Annotation( "BIRNLEX:918") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "VPLO") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:VIM") AnnotationAssertion( "BAMS:VPLO") AnnotationAssertion( "BIRNLEX:918") AnnotationAssertion( "FMA:62205") AnnotationAssertion(Annotation( "BIRNLEX:918") "UMLS:C0175286") AnnotationAssertion(Annotation( "BIRNLEX:918") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=345") AnnotationAssertion(Annotation( "BIRNLEX:918") "nucleus lateralis intermedius lateralis") AnnotationAssertion(Annotation( "BIRNLEX:918") "nucleus posteroventralis oralis") AnnotationAssertion(Annotation( "BIRNLEX:918") "nucleus ventralis intermedius (dewulf)") AnnotationAssertion(Annotation( "BIRNLEX:918") "nucleus ventralis intermedius (walker)") AnnotationAssertion(Annotation( "BIRNLEX:918") "nucleus ventralis intermedius thalami") AnnotationAssertion(Annotation( "BIRNLEX:918") "nucleus ventralis posterior lateralis, pars oralis") AnnotationAssertion(Annotation( "BIRNLEX:918") "nucleus ventrointermedius") AnnotationAssertion( "ventral part of ventral lateral posterior nucleus (jones)") AnnotationAssertion(Annotation( "FMA:62205") "ventral posterolateral nucleus, oral part") AnnotationAssertion(Annotation( "FMA:62205") "ventral posterolateral thalamic nucleus, oral part") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:345") "oral part of the ventral posterolateral nucleus") AnnotationAssertion(Annotation( "BAMS:VIM") "ventrointermedius nucleus") AnnotationAssertion( "UBERON:0003019") AnnotationAssertion(rdfs:label "oral part of ventral posterolateral nucleus") SubClassOf( ) SubClassOf(Annotation( "NIFSTD"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (subcallosal area) AnnotationAssertion(Annotation( ) "The subcallosal area (parolfactory area of Broca, area parolfactoria) is a small triangular field on the medial surface of the hemisphere in front of the subcallosal gyrus, from which it is separated by the posterior parolfactory sulcus; it is continuous below with the olfactory trigone, and above and in front with the cingulate gyrus; it is limited anteriorly by the anterior parolfactory sulcus. [WP,unvetted].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:SCA") AnnotationAssertion( "BIRNLEX:919") AnnotationAssertion( "FMA:61890") AnnotationAssertion(Annotation( "BIRNLEX:919") "UMLS:C0228282") AnnotationAssertion(Annotation( "BIRNLEX:919") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=278") AnnotationAssertion(Annotation( "FMA:61890") "adolfactory area") AnnotationAssertion(Annotation( "FMA:61890") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "area paraolfactoria") AnnotationAssertion(Annotation( "FMA:61890") "paraolfactory area") AnnotationAssertion(Annotation( "FMA:61890") "parolfactory area") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:278") "Zuckerkandl's gyrus") AnnotationAssertion(Annotation( ) Annotation( ) "area parolfactoria") AnnotationAssertion(Annotation( ) Annotation( ) "area subcallosa") AnnotationAssertion( "UBERON:0003020") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "subcallosal area") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/4/4d/Gray732.png"^^xsd:anyURI) SubClassOf( ) DisjointClasses(Annotation( "NIFSTD"^^xsd:string) ) # Class: (central lobule) AnnotationAssertion(Annotation( ) "The central lobule is a small square lobule, situated in the anterior cerebellar notch. It overlaps the lingula, from which it is separated by the precentral fissure; laterally, it extends along the upper and anterior part of each hemisphere, where it forms a wing-like prolongation, the ala lobuli centralis. [WP,unvetted].") AnnotationAssertion(Annotation( "FMA"^^xsd:string) "Note in FMA this is classified as a hemispheric lobule, which leads to inconsistencies. In ABA it is vermic, and FMA actually places it in the anterior vermis.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:CENT") AnnotationAssertion( "BAMS:CLb") AnnotationAssertion( "BIRNLEX:920") AnnotationAssertion( "FMA:72519") AnnotationAssertion( "MBA:920") AnnotationAssertion(Annotation( "FMA:72519") "central lobule of cerebellum") AnnotationAssertion(Annotation( "FMA:72519") "central lobule of cerebellum [II and III]") AnnotationAssertion(Annotation( "FMA:72519") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "lobulus centralis cerebelli [ii et iii]") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BAMS:CENT") "central lobe of the cerebellum") AnnotationAssertion(Annotation( "FMA:72519") "lobule II and III of vermis") AnnotationAssertion(Annotation( ) Annotation( ) "lobulus centralis") AnnotationAssertion( "UBERON:0003021") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "central lobule") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/e/e4/Gray703.png"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (obsolete lobe parts of cerebral cortex) AnnotationAssertion( "FMA:68603") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003022") AnnotationAssertion(rdfs:label "obsolete lobe parts of cerebral cortex") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (pontine tegmentum) AnnotationAssertion(Annotation( "BIRNLEX:923") "Dorsal portion of the pons, containing cranial nervee nuclei, ascending and descending tracts and reticular nuclei. It is continuous with the reticular formation of the medulla (Carpenter, A Core Text of Neuroanatomy, 3rd ed, 1985, pg 133).") AnnotationAssertion( "involved in the initiation of REM sleep [Wikipedia:Pontine_tegmentum]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:PTg") AnnotationAssertion( "BIRNLEX:923") AnnotationAssertion( "DHBA:12416") AnnotationAssertion( "FMA:71108") AnnotationAssertion( "HBA:9135") AnnotationAssertion(Annotation( "BIRNLEX:923") "UMLS:C0228426") AnnotationAssertion(Annotation( "BIRNLEX:923") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=557") AnnotationAssertion( "dorsal pons") AnnotationAssertion(Annotation( "FMA:71108") "dorsal portion of pons") AnnotationAssertion(Annotation( "FMA:71108") "tegmental portion of pons") AnnotationAssertion(Annotation( "FMA:71108") "tegmentum of pons") AnnotationAssertion(Annotation( "FMA:71108") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "tegmentum pontis") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:557") Annotation( ) "pars dorsalis pontis") AnnotationAssertion(Annotation( "NeuroNames:557") Annotation( ) "pars posterior pontis") AnnotationAssertion(Annotation( ) Annotation( ) "tegmentum pontis") AnnotationAssertion( "UBERON:0003023") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "pontine tegmentum") AnnotationAssertion( "Brainstem:Abducens.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (principal part of ventral posteromedial nucleus) AnnotationAssertion(Annotation( "BIRNLEX:927") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "VPMPr") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:VPMPr") AnnotationAssertion( "BIRNLEX:927") AnnotationAssertion( "FMA:62208") AnnotationAssertion(Annotation( "BIRNLEX:927") "UMLS:C0175289") AnnotationAssertion(Annotation( "BIRNLEX:927") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=348") AnnotationAssertion(Annotation( "BIRNLEX:927") "nucleus ventralis posteromedialis, pars prinicipalis") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:348") Annotation( ) "nucleus ventralis posteromedialis, pars principalis") AnnotationAssertion(Annotation( "NeuroNames:348") "principal part of the ventral posteromedial nucleus") AnnotationAssertion(Annotation( "NeuroNames:348") "ventral posteromedial nucleus, principal part") AnnotationAssertion( "UBERON:0003024") AnnotationAssertion(rdfs:label "principal part of ventral posteromedial nucleus") SubClassOf( ) SubClassOf(Annotation( "NIFSTD"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (brachium of inferior colliculus) AnnotationAssertion(Annotation( ) "The Brachium of inferior colliculus (or inferior brachium) carries auditory afferent fibers from the inferior colliculus of the mesencephalon to the medial geniculate nucleus. [WP,unvetted].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:BIC") AnnotationAssertion( "BAMS:bic") AnnotationAssertion( "BIRNLEX:929") AnnotationAssertion( "BM:MB-BSC") AnnotationAssertion( "DHBA:12327") AnnotationAssertion( "DMBA:17753") AnnotationAssertion( "FMA:71114") AnnotationAssertion( "HBA:265505386") AnnotationAssertion( "MBA:482") AnnotationAssertion(Annotation( "BIRNLEX:929") "UMLS:C0175372") AnnotationAssertion(Annotation( "BIRNLEX:929") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=480") AnnotationAssertion(Annotation( "FMA:71114") "brachium of medial geniculate") AnnotationAssertion(Annotation( "FMA:71114") "inferior brachium") AnnotationAssertion(Annotation( "FMA:71114") "inferior collicular brachium") AnnotationAssertion(Annotation( "FMA:71114") "inferior colliculus brachium") AnnotationAssertion(Annotation( "FMA:71114") "inferior quadrigeminal brachium") AnnotationAssertion(Annotation( "FMA:71114") "peduncle of inferior colliculus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:480") Annotation( ) "brachium colliculi caudalis") AnnotationAssertion(Annotation( ) Annotation( ) "brachium colliculi inferioris") AnnotationAssertion(Annotation( "NeuroNames:480") "brachium of the inferior colliculus") AnnotationAssertion(Annotation( "NeuroNames:480") Annotation( ) "brachium quadrigeminum inferius") AnnotationAssertion(Annotation( "BAMS:BIC") "nucleus of the brachium of the inferior colliculus") AnnotationAssertion( "UBERON:0003025") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "brachium of inferior colliculus") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/2/29/Human_brainstem-thalamus_posterior_view_description.JPG"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (limitans nucleus) AnnotationAssertion(Annotation( "BIRNLEX:931") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "Lim") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:Lim") AnnotationAssertion( "BIRNLEX:931") AnnotationAssertion( "BM:Die-Th-L") AnnotationAssertion( "DHBA:13043") AnnotationAssertion( "FMA:62220") AnnotationAssertion( "HBA:4429") AnnotationAssertion(Annotation( "BIRNLEX:931") "UMLS:C0175299") AnnotationAssertion(Annotation( "BIRNLEX:931") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=361") AnnotationAssertion(Annotation( "BIRNLEX:931") "limitans thalamic nucleus") AnnotationAssertion(Annotation( "BIRNLEX:931") "nucleus limitans") AnnotationAssertion(Annotation( "BIRNLEX:931") "nucleus limitans opticus (Hassler)") AnnotationAssertion(Annotation( "BIRNLEX:931") "nucleus limitans thalami") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003026") AnnotationAssertion(rdfs:label "limitans nucleus") SubClassOf( ) # Class: (cingulate cortex) AnnotationAssertion(Annotation( ) "The cingulate cortex is a part of the brain situated in the medial aspect of the cortex. It is extended from the corpus callosum below to the cingulate sulcus above, at least anteriorly. [WP,unvetted].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:934") AnnotationAssertion( "BM:Tel-Cx-Cg") AnnotationAssertion( "BTO:0003975") AnnotationAssertion( "DHBA:10277") AnnotationAssertion( "DMBA:16072") AnnotationAssertion( "EFO:0000343") AnnotationAssertion( "EMAPA:35242") AnnotationAssertion( "MA:0000904") AnnotationAssertion( "NCIT:C52713") AnnotationAssertion(Annotation( "BIRNLEX:934") "UMLS:C0598179") AnnotationAssertion(Annotation( "ncithesaurus:Cingulate_Cortex") "UMLS:C0598179") AnnotationAssertion(Annotation( "DHBA:10277") "cingulate neocortex") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "gyrus cingulatus") AnnotationAssertion(Annotation( ) "gyrus cinguli") AnnotationAssertion( "UBERON:0003027") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "cingulate cortex") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/d/dc/Gray727_cingulate_gyrus.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "NIFSTD"^^xsd:string) Annotation( "cjm"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (commissure of inferior colliculus) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A commissure that is part of a inferior colliculus [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:ICG") AnnotationAssertion( "BAMS:IGO") AnnotationAssertion( "BAMS:cic") AnnotationAssertion( "BIRNLEX:935") AnnotationAssertion( "DHBA:12333") AnnotationAssertion( "FMA:71115") AnnotationAssertion( "HBA:265505434") AnnotationAssertion( "MBA:633") AnnotationAssertion(Annotation( "BIRNLEX:935") "UMLS:C0152367") AnnotationAssertion(Annotation( "BIRNLEX:935") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=481") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "caudal colliculus commissure") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "commissure of caudal colliculus") AnnotationAssertion(Annotation( "FMA:71115") "commissure of inferior colliculi") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "commissure of posterior colliculus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "commissure of posterior corpus quadrigeminum") AnnotationAssertion(Annotation( "FMA:71115") "inferior collicular commissure") AnnotationAssertion(Annotation( "FMA:71115") "inferior colliculus commissure") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "posterior colliculus commissure") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "posterior corpus quadrigeminum commissure") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:481") Annotation( ) "commissura colliculi inferioris") AnnotationAssertion(Annotation( "NeuroNames:481") Annotation( ) "commissura colliculorum caudalium") AnnotationAssertion(Annotation( "NeuroNames:481") Annotation( ) "commissura colliculorum inferiorum") AnnotationAssertion(Annotation( "BAMS:ICG") "commissure of the inferior colliculi") AnnotationAssertion(Annotation( "BAMS:IGO") "commissure of the inferior colliculi") AnnotationAssertion(Annotation( "BAMS:cic") "commissure of the inferior colliculi") AnnotationAssertion(Annotation( "NeuroNames:481") "commissure of the inferior colliculus") AnnotationAssertion( "UBERON:0003028") AnnotationAssertion(rdfs:label "commissure of inferior colliculus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (stria terminalis) AnnotationAssertion(Annotation( "BIRNLEX:937") "White matter structure in the brain consisting of fibers running along the lateral margin of the ventricular surface of the thalamus. The stria terminalis covers the thalamostriate vein, marking a line of separation between the thalamus and the caudate nucleus as seen upon gross dissection of the ventricles of the brain, viewed from the superior aspect. The stria terminalis extends from the region of the interventricular foramen to the temporal horn of the lateral ventricle, carrying fibers from the amygdala to the septal, hypothalamic, and thalamic areas of the brain. It also carries fibers projecting from these areas back to the amygdala. (Wikipedia:Stria_terminalis).") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:STR") AnnotationAssertion( "BAMS:st") AnnotationAssertion( "BIRNLEX:937") AnnotationAssertion( "BM:ST") AnnotationAssertion( "BM:STr") AnnotationAssertion( "BTO:0004616") AnnotationAssertion( "DHBA:10591") AnnotationAssertion( "FMA:61974") AnnotationAssertion( "HBA:9278") AnnotationAssertion( "MBA:301") AnnotationAssertion(Annotation( "BIRNLEX:937") "UMLS:C0175243") AnnotationAssertion(Annotation( "BIRNLEX:937") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=286") AnnotationAssertion(Annotation( "FMA:61974") "semicircular stria") AnnotationAssertion(Annotation( ) "terminal stria") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0004616") "Tarins tenia") AnnotationAssertion(Annotation( "NeuroNames:286") Annotation( ) "fibrae striae terminalis") AnnotationAssertion(Annotation( "BTO:0004616") "fovilles fasciculus") AnnotationAssertion(Annotation( "NeuroNames:286") Annotation( ) "stria semicircularis") AnnotationAssertion(Annotation( ) Annotation( ) "stria terminalis") AnnotationAssertion(Annotation( "NeuroNames:286") "stria terminalis (Wenzel-Wenzel)") AnnotationAssertion(Annotation( "BTO:0004616") "tenia semicircularis") AnnotationAssertion( "UBERON:0003029") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "stria terminalis") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/e/ed/Gray683.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (posterior nucleus of thalamus) AnnotationAssertion(Annotation( "BIRNLEX:939") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "PTh") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:PTh") AnnotationAssertion( "BIRNLEX:939") AnnotationAssertion( "BM:Die-Th-Po") AnnotationAssertion( "DHBA:10440") AnnotationAssertion( "FMA:62221") AnnotationAssertion( "HBA:4431") AnnotationAssertion( "NCIT:C33370") AnnotationAssertion( "TAO:0000325") AnnotationAssertion(Annotation( "BIRNLEX:939") "UMLS:C0262315") AnnotationAssertion(Annotation( "ncithesaurus:Posterior_Nucleus_of_the_Thalamus") "UMLS:C0262315") AnnotationAssertion( "ZFA:0000325") AnnotationAssertion(Annotation( "BIRNLEX:939") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=362") AnnotationAssertion(Annotation( "BIRNLEX:939") "nucleus posterior thalami") AnnotationAssertion(Annotation( "FMA:62221") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "nucleus thalami posterior") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "TAO:0000325") "caudal thalamic nucleus") AnnotationAssertion(Annotation( "NeuroNames:362") "posterior nucleus of the thalamus") AnnotationAssertion( "UBERON:0003030") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "posterior nucleus of thalamus") SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) Annotation( "NIFSTD"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (submedial nucleus of thalamus) AnnotationAssertion(Annotation( "BIRNLEX:946") "Thalamic nucleus separated from the ventromedial part of the mediodorsal nucleus of the thalamus by the internal medullary lamina (Paxinos The rat nervous system 2nd ed, Academic Press, 1995).") AnnotationAssertion(Annotation( "BIRNLEX:946") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "SM") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:SMT") AnnotationAssertion( "BIRNLEX:946") AnnotationAssertion( "DMBA:16426") AnnotationAssertion( "EV:0100203") AnnotationAssertion( "FMA:62223") AnnotationAssertion( "HBA:4406") AnnotationAssertion( "MBA:366") AnnotationAssertion(Annotation( "BIRNLEX:946") "UMLS:C0175301") AnnotationAssertion(Annotation( "BIRNLEX:946") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=364") AnnotationAssertion(Annotation( "FMA:62223") "gelatinosus thalamic nucleus") AnnotationAssertion(Annotation( "FMA:62223") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "nucleus submedialis thalami") AnnotationAssertion(Annotation( "BIRNLEX:946") "nucleus submedius thalami") AnnotationAssertion(Annotation( "FMA:62223") "submedial nucleus") AnnotationAssertion(Annotation( "FMA:62223") "submedial nucleus of thalamus") AnnotationAssertion(Annotation( "BIRNLEX:946") "submedial nucleus thalamus") AnnotationAssertion(Annotation( "BIRNLEX:946") "submedial thalamic nucleus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:364") "submedial nucleus of the thalamus") AnnotationAssertion(Annotation( "NeuroNames:364") "submedius thalamic nucleus") AnnotationAssertion( "UBERON:0003031") AnnotationAssertion(rdfs:label "submedial nucleus of thalamus") SubClassOf( ) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (suprageniculate nucleus of thalamus) AnnotationAssertion(Annotation( "BIRNLEX:953") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "SG") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:SGN") AnnotationAssertion( "BAMS:SPGN") AnnotationAssertion( "BIRNLEX:953") AnnotationAssertion( "BM:Die-Th-SG") AnnotationAssertion( "DHBA:13044") AnnotationAssertion( "DMBA:16452") AnnotationAssertion( "FMA:62222") AnnotationAssertion( "HBA:4430") AnnotationAssertion( "MBA:325") AnnotationAssertion(Annotation( "BIRNLEX:953") "UMLS:C0152346") AnnotationAssertion(Annotation( "BIRNLEX:953") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=363") AnnotationAssertion(Annotation( "BIRNLEX:953") "nucleus suprageniculatus") AnnotationAssertion(Annotation( "FMA:62222") "suprageniculate nucleus") AnnotationAssertion(Annotation( "FMA:62222") "suprageniculate thalamic nucleus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003033") AnnotationAssertion(rdfs:label "suprageniculate nucleus of thalamus") SubClassOf( ) # Class: (central dorsal nucleus of thalamus) AnnotationAssertion(Annotation( "BIRNLEX:956") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "CD") AnnotationAssertion(Annotation( "NeuroNames:1853") "circular nucleus") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:CD") AnnotationAssertion( "BIRNLEX:956") AnnotationAssertion( "DHBA:13331") AnnotationAssertion( "EMAPA:35210") AnnotationAssertion( "FMA:62169") AnnotationAssertion(Annotation( "BIRNLEX:956") "UMLS:C0752053") AnnotationAssertion(Annotation( "BIRNLEX:956") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=319") AnnotationAssertion(Annotation( ) Annotation( "FMA:62169") "central dorsal nucleus") AnnotationAssertion(Annotation( "DHBA:13331") "central dorsal nucleus of thalamus") AnnotationAssertion(Annotation( "BIRNLEX:956") "nucleus centralis dorsalis thalami") AnnotationAssertion(Annotation( "BIRNLEX:956") "nucleus centralis superior lateralis") AnnotationAssertion(Annotation( "BIRNLEX:956") "nucleus centralis superior lateralis thalami") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BIRNLEX:956") Annotation( ) "nucleus circularis") AnnotationAssertion( "UBERON:0003034") AnnotationAssertion(rdfs:label "central dorsal nucleus of thalamus") SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) Annotation( "NIFSTD"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (obsolete regional part of cerebellar white matter) AnnotationAssertion( "BIRNLEX:959") AnnotationAssertion( "FMA:72547") AnnotationAssertion(Annotation( "BIRNLEX:959") "segment of cerebellar white matter") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003035") AnnotationAssertion(rdfs:label "obsolete regional part of cerebellar white matter") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (central lateral nucleus) AnnotationAssertion(Annotation( "BIRNLEX:961") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "CL") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:CL") AnnotationAssertion( "BAMS:CLN") AnnotationAssertion( "BIRNLEX:961") AnnotationAssertion( "BM:Die-CL") AnnotationAssertion( "DHBA:10444") AnnotationAssertion( "DMBA:16418") AnnotationAssertion( "EMAPA:35205") AnnotationAssertion( "EV:0100205") AnnotationAssertion( "FMA:62170") AnnotationAssertion( "HBA:4434") AnnotationAssertion( "MBA:575") AnnotationAssertion(Annotation( "BIRNLEX:961") "UMLS:C0228355") AnnotationAssertion(Annotation( "BIRNLEX:961") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=320") AnnotationAssertion(Annotation( "FMA:62170") "central lateral nucleus of thalamus") AnnotationAssertion(Annotation( "FMA:62170") "central lateral thalamic nucleus") AnnotationAssertion(Annotation( "FMA:62170") "centrolateral thalamic nucleus") AnnotationAssertion(Annotation( "BIRNLEX:961") "nucleus centralis lateralis of thalamus") AnnotationAssertion(Annotation( "BIRNLEX:961") "nucleus centralis lateralis thalami") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:320") "central lateral nucleus of the thalamus") AnnotationAssertion( "UBERON:0003036") AnnotationAssertion(rdfs:label "central lateral nucleus") SubClassOf( ) SubClassOf(Annotation( "NIFSTD"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (septum) AnnotationAssertion(Annotation( ) "A wall, dividing a cavity or structure into smaller ones[WP].") AnnotationAssertion( "septal") AnnotationAssertion( ) AnnotationAssertion( "AAO:0011127") AnnotationAssertion( "FMA:86461") AnnotationAssertion( "OpenCyc:Mx4rrqot_on_EdaAAAACs0uFOQ") AnnotationAssertion(Annotation( ) "septa") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003037") AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "general anatomical term in FMA") AnnotationAssertion(rdfs:label "septum") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (thoracic spinal cord) AnnotationAssertion(Annotation( ) "The thoracic nerves are the spinal nerves emerging from the thoracic vertebrae. [WP,unvetted].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:966") AnnotationAssertion( "FMA:71167") AnnotationAssertion( "MA:0003082") AnnotationAssertion( "NCIT:C12894") AnnotationAssertion(Annotation( "BIRNLEX:966") "UMLS:C0581620") AnnotationAssertion(Annotation( "ncithesaurus:Thoracic_Spinal_Cord") "UMLS:C0581620") AnnotationAssertion(Annotation( "FMA:71167") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "pars thoracica medullae spinalis") AnnotationAssertion(Annotation( "FMA:71167") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "segmenta thoracica medullae spinalis [1-12]") AnnotationAssertion(Annotation( "FMA:71167") "thoracic region of spinal cord") AnnotationAssertion(Annotation( "FMA:71167") "thoracic segment of spinal cord") AnnotationAssertion(Annotation( "FMA:71167") "thoracic segments of spinal cord [1-12]") AnnotationAssertion(Annotation( "FMA:71167") "thoracic spinal cord") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003038") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "thoracic spinal cord") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/6/68/Gray820.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (anterior commissure anterior part) AnnotationAssertion(Annotation( "MP:0010859") "The horseshoe-shaped tract that connects the two olfactory bulbs.") AnnotationAssertion(Annotation( "MP:0008230") "pars anterior") AnnotationAssertion( ) AnnotationAssertion( "BAMS:aca") AnnotationAssertion( "BAMS:aco") AnnotationAssertion( "BIRNLEX:969") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37404") AnnotationAssertion( "FMA:61963") AnnotationAssertion( "MBA:900") AnnotationAssertion(Annotation( "MP:0010859") "anterior commissure pars anterior") AnnotationAssertion(Annotation( "FMA:61963") "anterior commissure, anterior part") AnnotationAssertion(Annotation( "FMA:61963") "anterior part of anterior commissure") AnnotationAssertion(Annotation( "MP:0008230") "anterior part of anterior commissure") AnnotationAssertion(Annotation( "FMA:61963") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "commissura anterior, crus anterius") AnnotationAssertion(Annotation( "FMA:61963") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "commissura anterior, pars anterior") AnnotationAssertion(Annotation( "FMA:61963") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "commissura anterior, pars olfactoria") AnnotationAssertion(Annotation( "FMA:61963") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "commissura rostralis, pars anterior") AnnotationAssertion(Annotation( "FMA:61963") "olfactory limb of anterior commissure") AnnotationAssertion(Annotation( "FMA:61963") "olfactory part of anterior commissure") AnnotationAssertion(Annotation( "MP:0008230") "pars anterior commissurae anterioris") AnnotationAssertion(Annotation( "FMA:61963") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "pars olfactoria commissurae anterioris") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BAMS:aco") "anterior commissure olfactory limb") AnnotationAssertion(Annotation( "BAMS:aco") "anterior commissure, olfactory limb") AnnotationAssertion( "UBERON:0003039") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "anterior commissure anterior part") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses(Annotation( "lexical"^^xsd:string) ) DisjointClasses( ) # Class: (central gray substance of midbrain) AnnotationAssertion(Annotation( ) Annotation( ) "Periaqueductal gray (PAG; also called the 'central gray') is the gray matter located around the cerebral aqueduct within the midbrain. It plays a role in the descending modulation of pain and in defensive behaviour. The ascending pain and temperature fibers of the spinothalamic tract also send information to the PAG via the spinomesencephalic tract. The spinomesencephalic tract is so-named because the fibers originate in the spine and terminate in the mesencephalon, another name for the midbrain, the part of the brain in which the PAG resides. [WP,unvetted].") AnnotationAssertion(Annotation( "BIRNLEX:973") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "CGMB") AnnotationAssertion(Annotation( "BIRNLEX:973") "griseum centrale") AnnotationAssertion(Annotation( "BIRNLEX:973") "substantia grisea centralis") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:CGMB") AnnotationAssertion( "BAMS:PAG") AnnotationAssertion( "BIRNLEX:973") AnnotationAssertion( "BM:MB-PAG") AnnotationAssertion( "BTO:0002701") AnnotationAssertion( "DHBA:12209") AnnotationAssertion( "EFO:0002470") AnnotationAssertion( "EMAPA:32781") AnnotationAssertion( "EV:0100249") AnnotationAssertion( "FMA:74510") AnnotationAssertion( "GAID:585") AnnotationAssertion( "HBA:9003") AnnotationAssertion( "MA:0000209") AnnotationAssertion( "MA:0002895") AnnotationAssertion( "MBA:795") AnnotationAssertion( "MESH:A08.186.211.132.659.822.595") AnnotationAssertion( "TAO:0000518") AnnotationAssertion(Annotation( "BIRNLEX:973") "UMLS:C0228398") AnnotationAssertion( "ZFA:0000518") AnnotationAssertion(Annotation( "BIRNLEX:973") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=510") AnnotationAssertion(Annotation( "FMA:74510") "anulus of cerebral aqueduct") AnnotationAssertion(Annotation( "FMA:74510") "central (periaqueductal) gray") AnnotationAssertion(Annotation( "MA:0000209") "midbrain periaqueductal grey") AnnotationAssertion(Annotation( "FMA:74510") "periaqueductal gray") AnnotationAssertion(Annotation( "FMA:74510") "periaqueductal gray matter") AnnotationAssertion(Annotation( "FMA:74510") "periaqueductal gray of tegmentum") AnnotationAssertion(Annotation( "MA:0002895") "periaqueductal grey") AnnotationAssertion(Annotation( "EV:0100249") "periaqueductal grey matter") AnnotationAssertion(Annotation( "FMA:74510") "periaqueductal grey substance") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:510") Annotation( ) "anulus aquaeductus") AnnotationAssertion(Annotation( "NeuroNames:510") Annotation( ) "anulus aqueductus cerebri") AnnotationAssertion(Annotation( "BAMS:PAG") "central gray") AnnotationAssertion(Annotation( "NeuroNames:510") "central gray of the midbrain") AnnotationAssertion(Annotation( "NeuroNames:510") "central gray substance of the midbrain") AnnotationAssertion(Annotation( "MA:0000209") "central grey") AnnotationAssertion(Annotation( "NeuroNames:510") "central grey substance of midbrain") AnnotationAssertion(Annotation( "NeuroNames:510") Annotation( ) "griseum centrale mesencephali") AnnotationAssertion(Annotation( "NeuroNames:510") Annotation( ) "griseum periventriculare mesencephali") AnnotationAssertion(Annotation( "NeuroNames:510") "pAG") AnnotationAssertion(Annotation( ) Annotation( "MA:0002895") Annotation( ) "periaquectuctal grey") AnnotationAssertion(Annotation( "BAMS:PAG") "periaqueductal gray, proper") AnnotationAssertion(Annotation( ) Annotation( ) "s. grisea centralis") AnnotationAssertion(Annotation( "NeuroNames:510") Annotation( ) "substantia grisea centralis mesencephali") AnnotationAssertion( "UBERON:0003040") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "central gray substance of midbrain") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/d/da/Cn3nucleus.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "NIFSTD"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (trigeminal nerve fibers) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A nerve fiber that is part of a trigeminal nerve.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:5nf") AnnotationAssertion( "BIRNLEX:974") AnnotationAssertion( "FMA:72501") AnnotationAssertion(Annotation( "BIRNLEX:974") "UMLS:C0175452") AnnotationAssertion(Annotation( "BIRNLEX:974") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=607") AnnotationAssertion(Annotation( "FMA:72501") "central part of trigeminal nerve") AnnotationAssertion(Annotation( "FMA:72501") "trigeminal nerve fibers") AnnotationAssertion(Annotation( "FMA:72501") "trigeminal nerve tract") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:607") Annotation( ) "fibrae nervi trigemini") AnnotationAssertion( "UBERON:0003041") AnnotationAssertion(rdfs:label "trigeminal nerve fibers") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (posterior part of anterior commissure) AnnotationAssertion(Annotation( "MP:0010860") "The major forebrain commissure that connects the two temporal lobes of the cortex.") AnnotationAssertion(Annotation( "MP:0008229") "pars posterior") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:acp") AnnotationAssertion( "BAMS:act") AnnotationAssertion( "BIRNLEX:977") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37410") AnnotationAssertion( "FMA:61964") AnnotationAssertion( "MBA:908") AnnotationAssertion(Annotation( "BIRNLEX:977") "UMLS:C0175210") AnnotationAssertion(Annotation( "MP:0010860") "anterior commissure pars posterior") AnnotationAssertion(Annotation( "MP:0008230") "anterior commissure temporal limb") AnnotationAssertion(Annotation( "FMA:61964") "anterior commissure, posterior part") AnnotationAssertion(Annotation( "FMA:61964") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "commissura anterior, crus posterius") AnnotationAssertion(Annotation( "FMA:61964") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "commissura anterior, pars posterior") AnnotationAssertion(Annotation( "FMA:61964") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "commissura rostralis, pars posterior") AnnotationAssertion(Annotation( "FMA:61964") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "pars posterior commissurae anterioris") AnnotationAssertion(Annotation( "FMA:61964") "temporal limb of anterior commissure") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BAMS:act") "anterior commissure, temporal limb") AnnotationAssertion( "UBERON:0003043") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "posterior part of anterior commissure") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses( ) # Class: (uncinate fasciculus) AnnotationAssertion(Annotation( "BIRNLEX:983") "Pathway arising from the fastigial nucleus to the vestibular nuclei, reticular formation, motor neurons of brainstem and cervical spinal cord (Butler and Hodos, Comparative Vertebrate Neuroanatomy, 2nd ed., 2005, pg 261).") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:unc") AnnotationAssertion( "BIRNLEX:983") AnnotationAssertion( "DHBA:10594") AnnotationAssertion( "FMA:77636") AnnotationAssertion(Annotation( "BIRNLEX:983") "UMLS:C0228271") AnnotationAssertion(Annotation( "BIRNLEX:983") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=597") AnnotationAssertion(Annotation( "FMA:77636") "cerebral uncinate fasciculus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:597") "cerebellospinal tract") AnnotationAssertion(Annotation( "NeuroNames:597") Annotation( ) "fasciculus fastigio-vestibularis") AnnotationAssertion(Annotation( "NeuroNames:597") "fastigiobulbar tract") AnnotationAssertion(Annotation( "NeuroNames:597") "hook bundle of Russell") AnnotationAssertion(Annotation( "NeuroNames:597") Annotation( ) "russell's fasciculus") AnnotationAssertion(Annotation( "NeuroNames:597") Annotation( ) "tractus cerebello-bulbaris") AnnotationAssertion(Annotation( "NeuroNames:597") Annotation( ) "tractus uncinatus") AnnotationAssertion(Annotation( "NeuroNames:597") Annotation( ) "tractus uncinatus (Lewandowsky)") AnnotationAssertion(Annotation( "NeuroNames:597") "uncinate bundle of Russell") AnnotationAssertion(Annotation( "NeuroNames:597") "uncinate fascicle (Russell)") AnnotationAssertion(Annotation( "NeuroNames:597") "uncinate fasciculus of Russell") AnnotationAssertion(Annotation( "NeuroNames:597") "uncinate fasciculus of cerebellum") AnnotationAssertion(Annotation( "BAMS:unc") "uncinate fasciculus of pons") AnnotationAssertion(Annotation( "NeuroNames:597") "uncinate fasciculus of the pons") AnnotationAssertion(Annotation( "NeuroNames:597") "uncinate fasciculus-2") AnnotationAssertion( "UBERON:0003044") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "uncinate fasciculus") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/d/d1/Gray751.png"^^xsd:anyURI) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf(Annotation( "NIFSTD"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (dorsal longitudinal fasciculus) AnnotationAssertion(Annotation( "BIRNLEX:986") "A fiber bundle containing fibers from nuclei of the hypothalamus that project to the dorsal tegmental nucleus and other regions of the midbrain and the pons, as well as fibers originating in the pontine reticular formation and the medullary reticular formation that project to the thalamus and other regions of the forebrain (Carpenter-83). In NeuroNames it is a composite structure consisting of the dorsal longitudinal fasciculus of hypothalamus, the dorsal longitudinal fasciculus of midbrain, the dorsal longitudinal fasciculus of pons and the dorsal longitudinal fasciculus of medulla. (NeuroNames).") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:VCo") AnnotationAssertion( "BAMS:dlf") AnnotationAssertion( "BIRNLEX:986") AnnotationAssertion( "DHBA:12035") AnnotationAssertion( "FMA:83845") AnnotationAssertion( "HBA:9348") AnnotationAssertion( "MBA:547") AnnotationAssertion( "ZFA:0005266") AnnotationAssertion(Annotation( "BIRNLEX:986") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=722") AnnotationAssertion(Annotation( "FMA:83845") "bundle of Schutz") AnnotationAssertion(Annotation( "FMA:83845") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "fasciculus longitudinalis posterior") AnnotationAssertion(Annotation( "FMA:83845") "fasciculus of Schutz") AnnotationAssertion(Annotation( "FMA:83845") "posterior longitudinal fasciculus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "ZFA:0005266") "DLF") AnnotationAssertion(Annotation( "NeuroNames:722") "accessory cochlear nucleus") AnnotationAssertion(Annotation( "BAMS:dlf") "dorsal longitudinal fascicle") AnnotationAssertion(Annotation( ) Annotation( ) "fasciculus longitudinalis dorsalis") AnnotationAssertion(Annotation( ) Annotation( ) "fasciculus longitudinalis posterior") AnnotationAssertion(Annotation( "NeuroNames:722") Annotation( ) "nucleus acustici accessorici") AnnotationAssertion(Annotation( "NeuroNames:722") Annotation( ) "nucleus cochlearis anterior") AnnotationAssertion(Annotation( "NeuroNames:722") Annotation( ) "nucleus cochlearis ventralis") AnnotationAssertion(Annotation( "NeuroNames:722") "ventral cochlear nuclei") AnnotationAssertion(Annotation( "NeuroNames:722") "ventral division of cochlear nucleus") AnnotationAssertion( "UBERON:0003045") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "dorsal longitudinal fasciculus") SubClassOf( ) # Class: (ventral acoustic stria) AnnotationAssertion(Annotation( "BIRNLEX:991") "White matter structure containing fibers arising from neurons in the cochlear nuclear complex.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:vas") AnnotationAssertion( "BIRNLEX:991") AnnotationAssertion( "FMA:72498") AnnotationAssertion(Annotation( "BIRNLEX:991") "UMLS:C0175456") AnnotationAssertion(Annotation( "BIRNLEX:991") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=604") AnnotationAssertion(Annotation( "FMA:72498") "anterior acoustic stria") AnnotationAssertion(Annotation( "FMA:72498") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "stria cochlearis anterior") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:604") Annotation( ) "striae acusticae ventralis") AnnotationAssertion( "UBERON:0003046") AnnotationAssertion(rdfs:label "ventral acoustic stria") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ) # Class: (obsolete regional part of pretectal region) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A regional part of brain that is part of a pretectal region [Automatically generated definition].") AnnotationAssertion( "BIRNLEX:993") AnnotationAssertion( "FMA:74519") AnnotationAssertion(Annotation( "FMA:74519") "pretectal region segment") AnnotationAssertion(Annotation( "BIRNLEX:993") "segment of pretectal region") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003047") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "obsolete regional part of pretectal region") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete regional part of hypothalamus) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A regional part of brain that is part of a hypothalamus [Automatically generated definition].") AnnotationAssertion( "BIRNLEX:995") AnnotationAssertion( "FMA:67706") AnnotationAssertion( "SCTID:360454003") AnnotationAssertion(Annotation( "FMA:67706") "hypothalamus segment") AnnotationAssertion(Annotation( "BIRNLEX:995") "segment of hypothalamus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003048") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "obsolete regional part of hypothalamus") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (olfactory placode) AnnotationAssertion(Annotation( ) Annotation( "XAO:0000005") "A thick plate of cells derived from the neural ectoderm in the head region of the embryo that develops into the olfactory region of the nasal cavity.") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000186") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0030223693 Liem KF, Bemis WE, Walker WF, Grande L, Functional Anatomy of the Vertebrates: An Evolutionary Perspective (2001) p.43") "We conclude this section by listing some of the many synapomorphies of craniates, including (...) (2) neurogenic placodes (...).[well established][VHOG]") AnnotationAssertion( ) AnnotationAssertion( "AAO:0011076") AnnotationAssertion( "EFO:0003420") AnnotationAssertion( "EHDAA2:0001232") AnnotationAssertion( "EHDAA:1504") AnnotationAssertion( "EMAPA:16543") AnnotationAssertion( "FMA:293971") AnnotationAssertion( "TAO:0000048") AnnotationAssertion( "VHOG:0000186") AnnotationAssertion( "XAO:0000005") AnnotationAssertion( "ZFA:0000048") AnnotationAssertion(Annotation( ) "olfactory placodes") AnnotationAssertion(Annotation( ) "placoda nasalis") AnnotationAssertion(Annotation( ) "placoda olfactoria") AnnotationAssertion( "uberon") AnnotationAssertion( "nasal I placode") AnnotationAssertion( "nasal placode") AnnotationAssertion( "UBERON:0003050") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "Olfactory placodes are the only ectodermal placodes to produce glia, a cell type typically derived from neural crest // Note that NBK53171 classifies this as non-neurogenic") AnnotationAssertion(rdfs:label "olfactory placode") SubClassOf(Annotation( "NCBIBook:NBK53171") Annotation( "ZFA"^^xsd:string) ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (ear vesicle) AnnotationAssertion(Annotation( ) Annotation( "MP:0009806") "An epithelial sac of invaginated ectoderm formed from the otic placode that gives rise to the structures of the inner ear[MP].") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0000051") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "Epithelial sac present beside the fifth rhombomere; forms the semicircular canals dorsally and the otolith organs ventrally, and houses the acoustico-vestibular sensory epithelia (maculae) of hair cells. Kimmel et al, 1995. (Also see Anatomical Atlas entry for ear by T. Whitfield.)[TAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001148") Annotation( "VHOG"^^xsd:string) Annotation( ) "One of the paired sacs of invaginated ectoderm that develop into the membranous labyrinth of the internal ear. [Biology_online][VHOG]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001148") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0030223693 Liem KF, Bemis WE, Walker WF, Grande L, Functional Anatomy of the Vertebrates: An Evolutionary Perspective (2001) p.413") "The inner ear develops embryonically in all vertebrates as an invagination of the ectodermal otic placode to form an otic vesicle.[well established][VHOG]") AnnotationAssertion(Annotation( "MP") "MP defines as epithelial sac, but EHDAA defines as multi-tissue; See https://github.com/obophenotype/uberon/issues/1305") AnnotationAssertion( "UBERON:0004373") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0011080") AnnotationAssertion( "BTO:0002661") AnnotationAssertion( "EHDAA2:0001342") AnnotationAssertion( "EMAPA:16669") AnnotationAssertion( "FMA:302920") AnnotationAssertion( "NCIT:C34240") AnnotationAssertion( "TAO:0000051") AnnotationAssertion(Annotation( "ncithesaurus:Otic_Vesicle") "UMLS:C1518678") AnnotationAssertion( "VHOG:0001148") AnnotationAssertion( "XAO:0000006") AnnotationAssertion( "ZFA:0000051") AnnotationAssertion(Annotation( "MP:0004311") "otic vesicle") AnnotationAssertion( "uberon") AnnotationAssertion( "OV") AnnotationAssertion(Annotation( "VHOG:0001148") "acoustic vesicle") AnnotationAssertion(Annotation( "BTO:0002661") "auditory vesicle") AnnotationAssertion(Annotation( "MP:0004311") "otocyst") AnnotationAssertion( "UBERON:0003051") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "ear vesicle") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/2/2d/Gray40.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (midbrain-hindbrain boundary) AnnotationAssertion(Annotation( "GO:0021555") "The part of the brain that is the morphological boundary between the midbrain and hindbrain and that is the location of an organizing center which patterns the midbrain and hindbrain primordia of the neural plate.") AnnotationAssertion( "consider adding class for organizer. Consider adding separate class for isthmus as a structure") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000649") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "DOI:10.1016/j.ydbio.2005.02.008 Murakami Y, Uchida K, Rijli FM and Kuratani S, Evolution of the brain developmental plan: Insights from agnathans. Developmental Biology (2005)") "Lampreys also have an MHB [midbrain hindbrain boundary], expressing a similar repertoire of regulatory gene cognates as in gnathostomes.[well established][VHOG]") AnnotationAssertion( ) AnnotationAssertion( "AAO:0011064") AnnotationAssertion( "DMBA:16810") AnnotationAssertion( "EHDAA2:0004395") AnnotationAssertion( "EHDAA:5789") AnnotationAssertion( "EMAPA:32857") AnnotationAssertion( "NCIT:C93172") AnnotationAssertion( "TAO:0000042") AnnotationAssertion( "VHOG:0000649") AnnotationAssertion( "XAO:0000016") AnnotationAssertion( "ZFA:0000042") AnnotationAssertion( "MHB") AnnotationAssertion( "mid-hindbrain boundary") AnnotationAssertion( "mid-hindbrain junction") AnnotationAssertion( "midbrain hindbrain boundary") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "XAO:0000016") "isthmic organizer territory") AnnotationAssertion(Annotation( "VHOG:0000649") "isthmo-cerebellar region") AnnotationAssertion( "isthmus") AnnotationAssertion(Annotation( "Geisha:syn") Annotation( "NCBITaxon:8782"^^xsd:string) "isthmus/MHB") AnnotationAssertion( "UBERON:0003052") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "midbrain-hindbrain boundary") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "ZFA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "ZFA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (ventricular zone) AnnotationAssertion(Annotation( "ZFA:0001083") "Proliferative region that is part of the ventricular system.") AnnotationAssertion(Annotation( ) "Proliferative zone in the region of the neural tube adjacent to the lumen.") AnnotationAssertion(Annotation( "BTO:0003654") "There are two primary regions that are thought to give rise to neurons that make up the cerebellum. The first region is the ventricular zone (the roof of the fourth ventricle). This area produces Purkinje cells and deep cerebellar nuclear neurons[BTO:0003654].") AnnotationAssertion(Annotation( "BTO"^^xsd:string) "in BTO this is restricted to the 4th ventricle - however this class also represents the early ventricular zone as well as its post-natal remnants. The MA class is named 'ventricular zone of brain' and is presumably restricted to the post-natal zone; DHBA class is forebrain; PBA class is neocortex; TAO/ZFA is neocortex") AnnotationAssertion( "AAO:0011112") AnnotationAssertion( "BTO:0003654") AnnotationAssertion( "DHBA:10542") AnnotationAssertion( "EFO:0003624") AnnotationAssertion( "EMAPA:32679") AnnotationAssertion( "MA:0000819") AnnotationAssertion( "PBA:294022030") AnnotationAssertion( "TAO:0001083") AnnotationAssertion( "VHOG:0001224") AnnotationAssertion( "XAO:0000021") AnnotationAssertion( "ZFA:0001083") AnnotationAssertion( "VZ") AnnotationAssertion(Annotation( "MA:0000819") "brain ventricular zone") AnnotationAssertion( "ventricular zone of brain") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "ZFA:0001083") Annotation( ) "ventricular zones") AnnotationAssertion( "UBERON:0003053") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "ventricular zone") SubClassOf( ) SubClassOf(Annotation( "MA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "ZFA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (roof plate) AnnotationAssertion(Annotation( ) Annotation( "GO:0021509") "A single row of glia at the dorsal midline of the developing neural tube along the entire anterior-posterior axis. This region provides inductive signals for the specification of neuronal cell types and of the specification of neural crest cells. The cells comprising the roof plate are the precursors to radial glial cells.") AnnotationAssertion( "TODO - Note that although this is classically defined as being located on the neural tube, in many AOs the roof plate continues post-embryonically after the neural tube has ceased to exist. Consider 'roof plate of neural tube'. TODO - alar plate vs roof plate") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0007058") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "Multi-tissue structure that is the dorsal-most aspect of the devleloping neural tube.[TAO]") AnnotationAssertion( "UBERON:0003298") AnnotationAssertion( ) AnnotationAssertion( "AAO:0011097") AnnotationAssertion( "EHDAA2:0001270") AnnotationAssertion( "EHDAA:2891") AnnotationAssertion( "EHDAA:916") AnnotationAssertion( "EMAPA:16168") AnnotationAssertion( "EMAPA:35361") AnnotationAssertion( "TAO:0001436") AnnotationAssertion( "TAO:0007058") AnnotationAssertion( "VHOG:0000303") AnnotationAssertion( "ZFA:0001436") AnnotationAssertion( "ZFA:0007058") AnnotationAssertion(Annotation( "VHOG:0000303") "roof plate neural tube") AnnotationAssertion(Annotation( "ZFA:0001436") "roof plate neural tube region") AnnotationAssertion( "roofplate") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "alar plate") AnnotationAssertion(Annotation( "EMAPA:35361") "future brain roof plate") AnnotationAssertion( "UBERON:0003054") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "roof plate") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (periderm) AnnotationAssertion(Annotation( "ISBN:9780878932504") "A temporary epithelium that derives from the outer layer of the ectdoerm and is shed once the inner layer differentiates to form a true epidermis.") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0001185") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "The outermost epidermal layer covering the fish at embryonic stages; derived from the EVL and thought to eventually be replaced by the superficial stratum of the epidermis. Sometimes used synonymously with EVL. Le Guellec et al, 2004.[TAO]") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0001185") Annotation( "TAO"^^xsd:string) "relationship type change: OBO_REL:part_of ectoderm (TAO:0000016) CHANGED TO: develops_from ectoderm (UBERON:0000924)[TAO]") AnnotationAssertion( "In mice, the first non-basal layer formed at ~E9.5; it is a temporary structure composed of simple squamous epithelium that serves as the first barrier to the embryo's physical environment, exists throughout the entire keratinocyte stratification process, and sheds off at ~E17, when it is replaced by corneocytes[MP]") AnnotationAssertion( "In some mammals, Eyelid Fusion is thought to be driven by a population of cells which are derived from the periderm, the outermost layer of the developing epidermis") AnnotationAssertion( "Originally the epidermis is one layer thick, in most vertebrates it soon becomes a two-layered structure. The outer layer gives rise to the periderm. The periderm goes through distinct developmental phases and is ultimately sloughed into the amniotic fluid when differentiation of the underlying epidermal layers is complete. The function of the periderm is not known, but is thought to be related to transport/exchange between the fetus and the amniotic fluid (http://courses.washington.edu/hubio567/devbio/periderm.html)") AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0001846") AnnotationAssertion( "EHDAA:6538") AnnotationAssertion( "FMA:295662") AnnotationAssertion( "NCIT:C34247") AnnotationAssertion( "TAO:0001185") AnnotationAssertion(Annotation( "ncithesaurus:Periderm") "UMLS:C1518973") AnnotationAssertion( "VHOG:0001680") AnnotationAssertion( "XAO:0000029") AnnotationAssertion( "ZFA:0001185") AnnotationAssertion(Annotation( "EHDAA2:0001846") "skin periderm") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "ZFA:0001185") "EVL") AnnotationAssertion( "epidermis epithelial layer") AnnotationAssertion( "epidermis outer layer") AnnotationAssertion(Annotation( "MP:0013530") "epitrichium") AnnotationAssertion( "periderm") AnnotationAssertion( "UBERON:0003055") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "periderm") SubClassOf(Annotation( "EHDAA2"^^xsd:string) ) SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "ZFA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (pre-chordal neural plate) AnnotationAssertion(Annotation( "XB:curator") "The portion of neural plate anterior to the mid-hindbrain junction.") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001200") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0030223693 Liem KF, Bemis WE, Walker WF, Grande L, Functional Anatomy of the Vertebrates: An Evolutionary Perspective (2001) p.28"^^xsd:string) "(...) at some stage of its development, every chordate exhibits five uniquely derived characters or synapomorphies of the group: (...) (4) a single, tubular nerve cord that is located dorsal to the notochord (...).[well established][VHOG]") AnnotationAssertion( "AAO:0011084") AnnotationAssertion( "TAO:0007016") AnnotationAssertion( "VHOG:0001200") AnnotationAssertion( "XAO:0000045") AnnotationAssertion( "ZFA:0007016") AnnotationAssertion( "uberon") AnnotationAssertion( "anterior neural plate") AnnotationAssertion( "UBERON:0003056") AnnotationAssertion(rdfs:label "pre-chordal neural plate") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (chordal neural plate) AnnotationAssertion(Annotation( "XB:curator") "The portion of neural plate posterior to the mid-hindbrain junction.") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001201") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0030223693 Liem KF, Bemis WE, Walker WF, Grande L, Functional Anatomy of the Vertebrates: An Evolutionary Perspective (2001) p.28"^^xsd:string) "(...) at some stage of its development, every chordate exhibits five uniquely derived characters or synapomorphies of the group: (...) (4) a single, tubular nerve cord that is located dorsal to the notochord (...).[well established][VHOG]") AnnotationAssertion( "TAO:0007017") AnnotationAssertion( "VHOG:0001201") AnnotationAssertion( "XAO:0000046") AnnotationAssertion( "ZFA:0007017") AnnotationAssertion( "uberon") AnnotationAssertion( "posterior neural plate") AnnotationAssertion( "UBERON:0003057") AnnotationAssertion(rdfs:label "chordal neural plate") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (hypochord) AnnotationAssertion(Annotation( ) Annotation( "AAO:0000733") Annotation( "GO:0055016") Annotation( "ISBN:0815318960") "The hypochord is a transient rod-like structure in the embryos of fish, lampreys and amphibians that is located immediately ventral to the notochord. The hypochord may play a role in positioning the dorsal aorta[GO].") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0000031") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "A transient rod-like structure which is endodermally derived and located immediately ventral to the notochord. The hypochord is thought to play a role in positioning the dorsal aorta. Eriksson and Lofberg, 2000.[TAO]") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0000733") Annotation( "AAO"^^xsd:string) Annotation( "AAO:Pugener_2002") "Unsegmented ventral structure in the caudal region of anuran larvae; near metamorphosis the hypochord fuses to the coccyx, thereby forming the urostyle.[AAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000081") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "PMID:11548409 Korzh VP, T-box genes and developmental decisions that cells make. Russian Journal of Developmental Biology (2001)") "In other words, we identified variations in gene expression patterns that may contribute to a molecular basis of evolutionary variation of axial structures between Teleostei and Mammalia in the determination of body axis. As already mentioned, one such difference is illustrated by the hypochord present in lower vertebrates but absent in higher animals. Perhaps, Tbx-b and Tbx-c are involved in the mechanisms underlying the formation of this organ that were lost during later evolution leading to the disappearance of the hypochord itself, similarly to other organs, such as the lateral line.[uncertain][VHOG]") AnnotationAssertion( "AAO:0000733") AnnotationAssertion( "EFO:0003475") AnnotationAssertion( "TAO:0000031") AnnotationAssertion( "VHOG:0000081") AnnotationAssertion( "XAO:0000056") AnnotationAssertion( "ZFA:0000031") AnnotationAssertion(Annotation( "XAO:0000056") "ipochord") AnnotationAssertion(Annotation( ) Annotation( "GO:0055016") "subnotochordal rod") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003058") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "Unlike in frogs and axolotl, the hypochord does not appear to be endodermally derived[ZFA]. near metamorphosis the hypochord fuses to the coccyx, thereby forming the urostyle[AAO]") AnnotationAssertion(rdfs:label "hypochord") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "Bgee:AN"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (presomitic mesoderm) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Unsegmented field of paraxial mesoderm present posterior to the most recently formed somite pair, from which somites will form.") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0000279") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "Unsegmented field of paraxial mesoderm present posterior to the most recently formed somite pair, from which somites will form. Kimmel et al, 1995.[TAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000559") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "DOI:10.1006/dbio.2001.0460 Schubert M, Holland LZ, Dale Stokes M and Holland ND, Three Amphoxius Wnt Genes (AmphiWnt3, AmphiWnt5, and AmphiWnt6) Associated with the Tail Bud: the Evolution of Somitogenesis in Chordates. Developmental Biology (2001)") "It is reasonable to assume that the proximate invertebrate ancestor of the vertebrates had an amphioxus-like tail bud in its larval stage. This archetypal tail bud would have (...) (3) lacked any component of mesenchyme cells, (4) budded off new mesodermal segments directly, without any intervening zone of presomitic mesoderm (...). Then, early in vertebrate evolution, epithelium-to-mesenchyme interconversions (and the gene networks for effecting them) became prominent features of development. (...) In any case, conspicuous mesenchymal components tended to be added to the vertebrate tail bud itself. In addition, a mesenchymatous presomitic mesoderm (not a part of the tail bud proper) came to intervene between the tail bud and the forming somites.[well established][VHOG]") AnnotationAssertion( "AAO:0011086") AnnotationAssertion( "EFO:0001982") AnnotationAssertion( "EMAPA:16189") AnnotationAssertion( "EMAPA:16752") AnnotationAssertion( "TAO:0000279") AnnotationAssertion( "VHOG:0000559") AnnotationAssertion( "XAO:0000057") AnnotationAssertion( "ZFA:0000279") AnnotationAssertion( "segmental plate") AnnotationAssertion(Annotation( ) "unsegmented paraxial mesoderm") AnnotationAssertion( "uberon") AnnotationAssertion( "PSM") AnnotationAssertion( "presumptive somite mesoderm") AnnotationAssertion( "somitogenic mesoderm") AnnotationAssertion(Annotation( "GO:0002075") "somitomeric mesoderm") AnnotationAssertion(Annotation( "VHOG:0000559") "unsegmented mesenchyme") AnnotationAssertion( "UBERON:0003059") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "presomitic mesoderm") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "Bgee:AN"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (pronephric duct) AnnotationAssertion(Annotation( ) "In mammals, the pronephric duct is the predecessor of the Wolffian duct[WP].") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0000150") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "Duct of the embryonic kidney, present bilaterally ventral to the somites and leading to the anal region where it empties separately from, and just posterior to the anus. Kimmel et al, 1995.[TAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000082") Annotation( "VHOG"^^xsd:string) Annotation( ) "The first-formed kidney duct, which drains the kidney of most anamniotes and becomes the ductus deferens of male amniotes. [Bemis_WE, Functional_Anatomy_of_the_Vertebrates:_An_Evolutionary_Perspective, Glossary_G-3, Grande_L, Liem_KF, Third_Edition_(2001)_Orlando_Fla.:_Harcourt_College_Publishers, Walker_WF][VHOG]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000082") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0030223693 Liem KF, Bemis WE, Walker WF, Grande L, Functional Anatomy of the Vertebrates: An Evolutionary Perspective (2001) p.686") "(...) in all craniates, the archinephric duct develops in embryogeny.[well established][VHOG]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0011088") AnnotationAssertion( "NCIT:C34279") AnnotationAssertion( "TAO:0000150") AnnotationAssertion(Annotation( "ncithesaurus:Pronephric_Duct") "UMLS:C1283945") AnnotationAssertion( "VHOG:0000082") AnnotationAssertion( "XAO:0000063") AnnotationAssertion( "ZFA:0000150") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "VHOG:0000082") "archinephric duct") AnnotationAssertion(Annotation( ) Annotation( ) "ductus pronephricus") AnnotationAssertion(Annotation( "ZFA:0000150") Annotation( ) "pronephric ducts") AnnotationAssertion( "UBERON:0003060") AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "The pronephric duct collects the filtrate from the pronephric tubules and opens to the exterior of the pronephric kidney[GOC:mtg_kidney_jan10, PMID:15647339, XAO:0000063, ZFA:0000150]") AnnotationAssertion(rdfs:label "pronephric duct") SubClassOf(Annotation( "GO"^^xsd:string) ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "Wikipedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "XAO"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (blood island) AnnotationAssertion(Annotation( ) "Blood islands are structures in the developing embryo which lead to many different parts of the circulatory system. They primarily derive from plexuses formed from angioblasts. Within them, vacuoles appear through liquefaction of the central part of the syncytium into plasma. The lumen of the blood vessels thus formed is probably intracellular. The flattened cells at the periphery form the endothelium. The nucleated red blood corpuscles develop either from small masses of the original angioblast left attached to the inner wall of the lumen or directly from the flat endothelial cells. In either case the syncytial mass thus formed projects from and is attached to the wall of the vessel. Such a mass is known as a blood island and hemoglobin gradually accumulates within it. Later the cells on the surface round up, giving the mass a mulberry-like appearance. Then the red blood cells break loose and are carried away in the plasma. Such free blood cells continue to divide. Blood islands have been seen in the area vasculosa in the omphalomesenteric vein and arteries, and in the dorsal aorta[WP, unvetted].") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0000094") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "Nests of developing blood cells arising late in the segmentation period from the intermediate mass, and located in the anterior-ventral tail, just posterior to the yolk extension. Kimmel et al, 1995.[TAO]") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0011006") Annotation( "AAO"^^xsd:string) Annotation( "AAO:EJS"^^xsd:string) "Region located on the ventral surface of the developing embryo that is a site of hematopoiesis and that is analogous to the yolk sac blood islands of higher vertebrates.[AAO]") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0000094") Annotation( "TAO"^^xsd:string) "relationship loss: part_of intermediate cell mass of mesoderm (TAO:0000033)[TAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000085") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0072528305 Kardong KV, Vertebrates: Comparative Anatomy, Function, Evolution (2006) p.450, DOI:10.1146/annurev.cellbio.22.010605.093317 Hartenstein V, Blood cells and blood cell development in the animal kingdom. Annual Review of Cell and Developmental Biology (2006)") "Small clusters of mesodermal cells called blood islands mark the embryonic debut of the cardiovascular system (in vertebrates) (reference 1); In birds and mammals, primitive hemangioblasts are extraembryonic, populating the yolk sac as the so-called blood islands (reference 2).[well established][VHOG]") AnnotationAssertion(Annotation( "EHDAA2"^^xsd:string) "EHDAA2 distinguishes 3 types, but does not have a superclass. The VHOG class may refer to yolk sac") AnnotationAssertion( "ventral lateral plate mesoderm") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0011006") AnnotationAssertion( "EFO:0003489") AnnotationAssertion( "EHDAA:207") AnnotationAssertion( "NCIT:C34113") AnnotationAssertion( "TAO:0000094") AnnotationAssertion( "TE:E5.11.2.0.0.0.4") AnnotationAssertion(Annotation( "ncithesaurus:Blood_Island") "UMLS:C1511224") AnnotationAssertion( "VHOG:0000085") AnnotationAssertion( "XAO:0000067") AnnotationAssertion( "ZFA:0000094") AnnotationAssertion(Annotation( ) "blood islands") AnnotationAssertion( "uberon") AnnotationAssertion( "VBI") AnnotationAssertion( "caudal hematopoietic tissue") AnnotationAssertion( "posterior ICM") AnnotationAssertion( "posterior blood island") AnnotationAssertion( "ventral blood island") AnnotationAssertion( "UBERON:0003061") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "blood island") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (primitive knot) AnnotationAssertion(Annotation( ) Annotation( ) Annotation( "MP:0004066") "Organizer for gastrulation in vertebrates. The primitive knot starts as a regional knot of cells that forms on the blastodisc immediately anterior to where the outer layer of cells will begin to migrate inwards - an area known as the primitive streak. Posterior to the node is the primitive pit, where the cells of the epiblast (the upper layer of embryonic cells) initially begin to invaginate. This invagination expands posteriorly into the primitive groove as the cells layers continue to move into the space between the embryonic cells and the yolk. This differentiates the embryo into the germ layers - endoderm, mesoderm, and ectoderm. The primitive knot migrates posteriorly as gastrulation proceeds, eventually being absorbed into the tail bud.[WP]. the regional thickening of cells at the rostral tip of the vertebrate primitive streak through which gastrulating cells migrate anteriorally to form tissues in the future head and neck; this region organizes the formation of the three embryonic layers and establishes the longitudinal axis and the polarity of the embryo[MP].") AnnotationAssertion( "This class groups together possibly disparate structures, following homology class in vHOG; early development terms need review") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0000346") Annotation( "AAO"^^xsd:string) Annotation( "AAO:BJB"^^xsd:string) "A signaling center that directs the development of the whole embryo or of part of the embryo.[AAO]") AnnotationAssertion(Annotation( "ZFIN:ZDB-PUB-961014-576") "Embryonic structure that is a local accumulation of cells along the germ ring. The shield marks the dorsal side of the embryo[ZFIN:ZDB-PUB-961014-576].") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000598") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "DOI:10.1046/j.1525-142x.2000.00073.x Neidert AH, Panopoulou G and Langeland JA, Amphioxus goosecoid and the evolution of the head organizer and prechordal plate. Evolution and Development (2008)") "The organizer is a central feature of vertebrate embryogenesis. It was first characterized in functional terms in amphibians by Spemann and Mangold (1924), and homologous tissues have since been identified in representatives of most other vertebrate classes, including mammals (the node), birds (Henson's node) and teleost fish (the embryonic shield).[well established][VHOG]") AnnotationAssertion( "UBERON:0004018") AnnotationAssertion(Annotation( "EMAPA:16075") Annotation( "ISBN:9780878932504") "node") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0000346") AnnotationAssertion( "BILA:0000053") AnnotationAssertion( "BTO:0003395") AnnotationAssertion( "EHDAA2:0001272") AnnotationAssertion( "EHDAA:549") AnnotationAssertion( "EMAPA:16075") AnnotationAssertion( "FMA:293116") AnnotationAssertion( "GAID:1312") AnnotationAssertion( "MESH:A16.254.650") AnnotationAssertion( "NCIT:C34266") AnnotationAssertion( "TAO:0000071") AnnotationAssertion(Annotation( "ncithesaurus:Primitive_Node") "UMLS:C1283999") AnnotationAssertion( "VHOG:0000598") AnnotationAssertion( "XAO:0000072") AnnotationAssertion( "ZFA:0000071") AnnotationAssertion(Annotation( ) Annotation( "GAID:1312") Annotation( ) "Hensen node") AnnotationAssertion(Annotation( ) Annotation( "GAID:1312") Annotation( ) "Hensen's node") AnnotationAssertion(Annotation( "ZFA:0000071") Annotation( ) "Spemann Mangold organizer") AnnotationAssertion(Annotation( "ZFA:0000071") Annotation( ) "Spemann's organizer") AnnotationAssertion(Annotation( "GAID:1312") "embryo organizer") AnnotationAssertion(Annotation( "GAID:1312") "embryonic organizer") AnnotationAssertion(Annotation( ) "embryonic shield") AnnotationAssertion(Annotation( "ZFA:0000071") "organizer") AnnotationAssertion(Annotation( ) "primitive node") AnnotationAssertion(Annotation( "ZFA:0000071") "shield") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "VHOG:0000598") "DMZ") AnnotationAssertion(Annotation( "EMAPA:16075") "Henson's node") AnnotationAssertion(Annotation( "XAO:0000072") "dorsal marginal zone") AnnotationAssertion(Annotation( ) Annotation( ) "nodus primitivus") AnnotationAssertion( "UBERON:0003062") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "primitive knot") SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ) SubClassOf(Annotation( "ZFA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA") ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "Bgee:AN"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (prechordal plate) AnnotationAssertion(Annotation( "ISBN:0838580343") Annotation( "MP:0004387") "A horseshoe-shaped thickening of the endoderm at the cranial (rostral) end of the primitive streak formed by the involution of Spemann's organizer cells which, together with the notochord, induces the formation of the neural plate from the overlying ectodermal cells and contributes mesodermal type cells to the surrounding tissue.") AnnotationAssertion( "TODO - check; developmental relationship to anterior hypoblast in ZFA?") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0000060") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "Axial hypoblast located anterior to the chorda mesoderm; the polster is its most anterior region. Kimmel et al, 1995.[TAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000086") Annotation( "VHOG"^^xsd:string) Annotation( ) "Axial mesoderm that lies anterior to the notochord and that underlies the forebrain. [Amphioxus_goosecoid_and_the_evolution_of_the_head_organizer_and_prechordal_plate._Evolution_and_Development_(2008)_2(6):303-310, Neidert_AH, Panopoulou_G_and_Langeland_JA][VHOG]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000086") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "DOI:10.1046/j.1525-142x.2000.00073.x Neidert AH, Panopoulou G and Langeland JA, Amphioxus goosecoid and the evolution of the head organizer and prechordal plate. Evolution and Development (2008)") "There are two opposing models that can potentially explain the differences in gsc (goosecoid) expression between amphioxus and vertebrates. In one model, the vertebrate gsc expression pattern more closely resembles the common ancestral state and the amphioxus gsc expression pattern is a derivation associated with its unique morphology. (...) In an alternate model, the amphioxus gsc expression pattern most closely represents the common ancestral state and the vertebrate pattern is derived. This model suggests that the evolution of vertebrates was accompanied by the segregation of gsc expression, from a more general domain underlying the entire brain anlage to a distinct forebrain organizer domain and subsequent prechordal plate. We feel this second model is more parsimonious than the first model in that what would be novel anterior gsc expression in vertebrates directly correlates with a novel vertebrate anterior structure, the prechordal plate.[well established][VHOG]") AnnotationAssertion( "UBERON:0004881") AnnotationAssertion(Annotation( "XAO:0000079") "head mesenchyme") AnnotationAssertion(Annotation( "XAO:0000079") "head mesoderm") AnnotationAssertion( ) AnnotationAssertion( "AAO:0011085") AnnotationAssertion( "EHDAA2:0001493") AnnotationAssertion( "EHDAA:181") AnnotationAssertion( "FMA:295532") AnnotationAssertion( "TAO:0000060") AnnotationAssertion( "VHOG:0000086") AnnotationAssertion( "XAO:0000079") AnnotationAssertion( "ZFA:0000060") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003063") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "prechordal plate") SubClassOf( ) SubClassOf(Annotation( "ZFA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "PMID:16313393") ObjectSomeValuesFrom( )) # Class: (intermediate mesoderm) AnnotationAssertion(Annotation( ) Annotation( "GOC:curators") "The intermediate mesoderm is located between the lateral mesoderm and the paraxial mesoderm. It develops into the kidney and gonads.") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0010575") Annotation( "AAO"^^xsd:string) Annotation( "AAO:EJS"^^xsd:string) "Mesoderm between somite and lateral plate. Traditionally thought to give rise to the urogenital system.[AAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000087") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "Wikipedia:Mesoderm, ISBN:978-0198566694 Schmidt-Rhaesa A, The evolution of organ systems (2007) p.43") "(...)the mesoderm of a developing vertebrate transitionally differentiates into the following sub-types: Chordamesoderm (also known as axial mesoderm) which later on gives rise to notochord in all chordates, Paraxial mesoderm, Intermediate mesoderm, Lateral plate mesoderm (reference 1); The mesoderm is present in Bilateria, therefore they are sometimes called triploblasts. Ectoderm and endoderm are usually organized as epithelial layers, while mesoderm can be epithelial or a compact, three-dimensional tissue.[well established][VHOG]") AnnotationAssertion(Annotation( "ZFA"^^xsd:string) "all AOs differ in the relationship between this structure and the mesoderm; in ZFA it is a subclass (and this is implied by the GO definition and GO relationships), in AAO it is part of, and in EHDAA2 it develops from the mesoderm (but in EHDAA2 the naming convention is to use 'paraxial mesenchyme', rather than 'paraxial mesoderm').") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010575") AnnotationAssertion( "EMAPA:16056") AnnotationAssertion( "EMAPA:16178") AnnotationAssertion( "FMA:293147") AnnotationAssertion( "NCIT:C34193") AnnotationAssertion( "TAO:0001206") AnnotationAssertion(Annotation( "ncithesaurus:Intermediate_Mesoderm") "UMLS:C1284010") AnnotationAssertion( "VHOG:0000087") AnnotationAssertion( "XAO:0000085") AnnotationAssertion( "ZFA:0001206") AnnotationAssertion( "uberon") AnnotationAssertion( "IM") AnnotationAssertion(Annotation( ) "intermediate mesenchyme") AnnotationAssertion(Annotation( "EMAPA:16178") "intermediate plate") AnnotationAssertion(Annotation( ) "intermediate plate mesoderm") AnnotationAssertion(Annotation( ) Annotation( ) "mesenchyma intermedium") AnnotationAssertion( "UBERON:0003064") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "intermediate mesoderm") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/6/64/Gray19_with_color.png"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "AAO"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EMAPA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "XAO"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (ciliary marginal zone) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Region at the periphery of the retina where retinal stem cells are located. After 60 hpf, the CMZ is the source of most retinal growth.[Wehman et al, 2005].") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0001289") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "Region at the periphery of the retina where retinal stem cells are located. After 60 hpf, the CMZ is the source of most retinal growth. Wehman et al, 2005.[TAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000088") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "DOI:10.1159/000057571 Reh TA, Fischer AJ, Stem cells in the vertebrate retina. Brain Behav Evol (2001)") "The retina of all vertebrates develops via similar mechanisms. Toward the end of retinal histogenesis, proliferating progenitors and newly generated cells are confined to peripheral regions of the retina. In fish and amphibians, this region is maintained after embryonic development and becomes the CMZ (ciliary margin zone). A CMZ exists in birds but compared to that of fish and amphibians this region produces much less new retina as the globe of the eye expands postnatally. At least some of the molecular mechanisms that regulate the addition of new cells in this zone appear to have been conserved from fish to birds.[well established][VHOG]") AnnotationAssertion( "AAO:0010342") AnnotationAssertion( "EFO:0003668") AnnotationAssertion( "TAO:0001289") AnnotationAssertion( "VHOG:0000088") AnnotationAssertion( "XAO:0000086") AnnotationAssertion( "ZFA:0001289") AnnotationAssertion(Annotation( "ZFA:0001289") "peripheral growth zone") AnnotationAssertion(Annotation( "ZFA:0001289") "retinal ciliary marginal zone") AnnotationAssertion( "uberon") AnnotationAssertion( "CMZ") AnnotationAssertion( "circumferential germinal zone") AnnotationAssertion(Annotation( "ZFA:0001289") "retinal proliferative zone") AnnotationAssertion( "UBERON:0003065") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "ciliary marginal zone") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pharyngeal arch 2) AnnotationAssertion(Annotation( ) Annotation( ) Annotation( "ZFIN:yb") "The second pharyngeal arch will form the hyoid apparatus. The cranial neural crest cells that populate the second pharyngeal arch emerge primarily from rhombomere 4 and will form skeletal elements.") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0010363") Annotation( "AAO"^^xsd:string) Annotation( "XAO:EJS") "The second of the series of bony or cartilaginous arches that develop in the walls of the mouth cavity and pharynx of the embryo.[AAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000297") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "DOI:10.1111/j.1469-7580.2005.00472.x Graham A, Okabe M and Quinlan R, The role of the endoderm in the development and evolution of the pharyngeal arches. J Anat (2005)") "A conserved feature of all vertebrate embryos is the presence of a series of bulges on the lateral surface of the head, the pharyngeal arches; it is within these structures that the nerves, muscles and skeletal components of the pharyngeal apparatus are laid down. The pharyngeal arches are separated by endodermal outpocketings, the pharyngeal pouches.[well established][VHOG]") AnnotationAssertion(Annotation( "XAO"^^xsd:string) "in XAO, develops from visceral pouch 2") AnnotationAssertion( "2"^^xsd:nonNegativeInteger) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010363") AnnotationAssertion( "EHDAA2:0000050") AnnotationAssertion( "EHDAA:611") AnnotationAssertion( "EMAPA:16272") AnnotationAssertion( "FMA:293017") AnnotationAssertion( "NCIT:C34288") AnnotationAssertion( "TAO:0001596") AnnotationAssertion( "VHOG:0000297") AnnotationAssertion( "XAO:0000098") AnnotationAssertion( "ZFA:0001611") AnnotationAssertion( "2nd pharyngeal arch") AnnotationAssertion(Annotation( ) Annotation( ) "arcus pharyngeus secundus") AnnotationAssertion(Annotation( ) "branchial arch 2") AnnotationAssertion(Annotation( "XAO:0000098") "hyoid arch") AnnotationAssertion( "pharyngeal arch 2") AnnotationAssertion(Annotation( ) "second branchial arch") AnnotationAssertion( "second pharyngeal arch") AnnotationAssertion(Annotation( ) "second visceral arch") AnnotationAssertion(Annotation( ) "visceral arch 2") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "EHDAA2:0000050") "2nd arch") AnnotationAssertion(Annotation( "VHOG:0000297") "2nd visceral arch") AnnotationAssertion( "hyoid bars") AnnotationAssertion(Annotation( "VHOG:0000297") "pharyngeal arches 2") AnnotationAssertion( "UBERON:0003066") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "pharyngeal arch 2") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/8/8b/Gray41.png"^^xsd:anyURI) SubClassOf( ) # Class: (dorsolateral placode) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Lateral neurogenic placodes positioned dorsal of the epibranchial placodes.") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000103") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "DOI:10.1073/pnas.97.9.4449 Shimeld SM and Holland PW. Vertebrate innovations. PNAS (2000)") "In summary, the collective term 'placodes' refers to some rather different structures, probably with different evolutionary origins. Some sensory placodes (at least the otic and olfactory) may have homologues in basal chordates. Even if this is so, it is apparent that they were elaborated considerably during early vertebrate evolution. Epibranchial and dorsolateral placodes appear to be new; we infer that their origin depended on the evolution of specific inductive signals.[well established][VHOG]") AnnotationAssertion( "TAO:0001310") AnnotationAssertion( "VHOG:0000103") AnnotationAssertion( "XAO:0000187") AnnotationAssertion( "ZFA:0001310") AnnotationAssertion(Annotation( "ZFA:0001310") Annotation( ) "dorsolateral placodes") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003067") AnnotationAssertion(rdfs:comment "The only remaining dorsolateral placode in land vertebrates is the otic/octaval placode") AnnotationAssertion(rdfs:label "dorsolateral placode") SubClassOf(Annotation( "NCBIBook:NBK53175"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (axial mesoderm) AnnotationAssertion(Annotation( ) Annotation( "GO:0048318") "The axial mesoderm includes the prechordal mesoderm and the chordamesoderm. It gives rise to the prechordal plate and to the notochord.") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000107") Annotation( "VHOG"^^xsd:string) Annotation( ) "The portion of the mesoderm underlying the midline of the embryo. [Gastrulation:_From_cells_to_embryo_(2004)_Cold_Spring_Harbor, Glossary_XV, New_York:_Cold_Spring_Harbor_Laboratory_Press, Stern_CD][VHOG]") AnnotationAssertion( ) AnnotationAssertion( "AAO:0011017") AnnotationAssertion( "EFO:0003647") AnnotationAssertion( "TAO:0001204") AnnotationAssertion( "VHOG:0000107") AnnotationAssertion( "XAO:0000205") AnnotationAssertion( "ZFA:0001204") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "chordamesoderm") AnnotationAssertion( "UBERON:0003068") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "axial mesoderm") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/6/64/Gray19_with_color.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (otic placode) AnnotationAssertion(Annotation( ) Annotation( "NCBIBook:NBK53175") "A cranial placode which, once specified, invaginates to form an otic cup, which eventually separates from the surface ectoderm to form the otic vesicle or otocyst, a rounded structure without appar- ent polarity. As the otic placode invaginates into a cup neuroblasts delaminate from the anterior ventral aspect of the otic epithelium to give rise to neurons of the vestibulocochlear (statoacoustic) ganglion of cranial nerve VIII[NBK].") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0000138") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "Primordium of the ear epithelium before it hollows into the otic vesicle, present beside the hindbrain rudiment in the midsegmentation period. Kimmel et al, 1995. (Also see Anatomical Atlas entry for ear by T. Whitfield.)[TAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000235") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0030223693 Liem KF, Bemis WE, Walker WF, Grande L, Functional Anatomy of the Vertebrates: An Evolutionary Perspective (2001) p.43") "We conclude this section by listing some of the many synapomorphies of craniates, including (...) (2) neurogenic placodes (...).[well established][VHOG]") AnnotationAssertion(Annotation( "NCBIBook:NBK53175"^^xsd:string) "With the exception of the pigment cells of the stria vascularis and the secretory epithelium of the cochlea, which are of neural crest origin, all compo- nents of the inner ear derive from the otic placode. In most species the thickening of the ectoderm into a placode occurs in a region adjacent to rhombomere 5 (reviewed in Ohyama et al., 2007), while in amphibians the otic placode is centered onto rhombomere 4 (Ruiz i Altaba and Jessell, 1991).") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0011079") AnnotationAssertion( "EFO:0003429") AnnotationAssertion( "EHDAA2:0001339") AnnotationAssertion( "EHDAA:506") AnnotationAssertion( "EMAPA:16195") AnnotationAssertion( "FMA:293973") AnnotationAssertion( "NCIT:C34239") AnnotationAssertion( "TAO:0000138") AnnotationAssertion(Annotation( "ncithesaurus:Otic_Placodes") "UMLS:C1518677") AnnotationAssertion( "VHOG:0000235") AnnotationAssertion( "XAO:0000223") AnnotationAssertion( "ZFA:0000138") AnnotationAssertion(Annotation( ) "placoda otica") AnnotationAssertion( "uberon") AnnotationAssertion( "auditory placode") AnnotationAssertion( "ear placode") AnnotationAssertion( "ear/otic placode") AnnotationAssertion(Annotation( "ISBN:0471888893"^^xsd:string) "octaval VIII placode") AnnotationAssertion(Annotation( "ISBN:0471888893"^^xsd:string) "octaval placode") AnnotationAssertion( "UBERON:0003069") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "otic placode") SubClassOf(Annotation( "invaginates") Annotation( "NCBIBook:NBK53175"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (trigeminal placode complex) AnnotationAssertion(Annotation( ) Annotation( ) Annotation( ) "A neurogenic placode that arises at the level of the midbrain-hindbrain boundary and develops into a trigeminal ganglion.") AnnotationAssertion(Annotation( "XAO") "The ectodermal precursor of the trigeminal ganglion. The profundal and the trigeminal ganglia are separate distally but fused at their proximal end as they condense around NF stage 24.[XAO]") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0000162") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "The ectodermal rudiment of the trigeminal ganglion, distinguishable during much of the segmentation period. Kimmel et al, 1995.[TAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000109") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "DOI:10.1073/pnas.97.9.4449 Shimeld SM and Holland PW. Vertebrate innovations. PNAS (2000)") "The dorsolateral placodes (trigeminal and vestibular) develop from ectoderm lateral to the brain (...). In summary, the collective term 'placodes' refers to some rather different structures, probably with different evolutionary origins. Some sensory placodes (at least the otic and olfactory) may have homologues in basal chordates. Even if this is so, it is apparent that they were elaborated considerably during early vertebrate evolution. Epibranchial and dorsolateral placodes appear to be new; we infer that their origin depended on the evolution of specific inductive signals.[well established][VHOG]") AnnotationAssertion( "Consider naming this 'trigeminal placode complex'. Also, Fig9-5 of ISBN:0471888893 calls this the profundus placode; XAO says 'profundal and the trigeminal ganglia are separate distally but fused at their proximal end...'") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EFO:0003433") AnnotationAssertion( "EHDAA2:0004209") AnnotationAssertion( "TAO:0000162") AnnotationAssertion( "VHOG:0000109") AnnotationAssertion( "XAO:0000225") AnnotationAssertion( "ZFA:0000162") AnnotationAssertion( "trigeminal V placode") AnnotationAssertion(Annotation( "EHDAA2:0004209") Annotation( "VHOG:0000109") Annotation( "XAO:0000225") Annotation( "ZFA:0000162") "trigeminal placode") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "ISBN:0471888893"^^xsd:string) Annotation( ) "profundus V placode") AnnotationAssertion(Annotation( "ISBN:0471888893"^^xsd:string) Annotation( ) "profundus placode") AnnotationAssertion(Annotation( "ZFA:0000162") Annotation( ) "trigeminal placodes") AnnotationAssertion( "UBERON:0003070") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "trigeminal placode complex") SubClassOf(Annotation( "ISBN:0471888893"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (eye primordium) AnnotationAssertion(Annotation( "GO:0046619") Annotation( "ZFA:0000570") "Portion of tissue that is part of the anterior neural keel and will form the optic vesicle[ZFA]. A paired ectodermal placode that becomes invaginated to form the embryonic lens vesicles.") AnnotationAssertion(Annotation( "GO") "TODO - check that GO's optic placode is the same as ZFA's eye primordium; we may want to have separate term for ocular primordium precursor. XAO has both optic field and eye primordium.") AnnotationAssertion( "UBERON:0005060") AnnotationAssertion( "AAO:0011038") AnnotationAssertion( "EFO:0003541") AnnotationAssertion( "EHDAA2:0004431") AnnotationAssertion( "TAO:0000570") AnnotationAssertion( "XAO:0000227") AnnotationAssertion( "XAO:0004090") AnnotationAssertion( "ZFA:0000570") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "eye placode") AnnotationAssertion( "occular primordium") AnnotationAssertion( "ocular primordium") AnnotationAssertion(Annotation( "GO:0046619") "optic placode") AnnotationAssertion(Annotation( ) Annotation( "GO:0046619") "optic placode of camera-type eye") AnnotationAssertion( "optic primordium") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "XAO:0000227") "eye anlage") AnnotationAssertion( "eye field") AnnotationAssertion( "optic field") AnnotationAssertion(Annotation( ) "optic placodes") AnnotationAssertion( "UBERON:0003071") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "eye primordium") SubClassOf(Annotation( "EHDAA2"^^xsd:string) ) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (optic cup) AnnotationAssertion(Annotation( ) Annotation( "MP:0004269") Annotation( "ZFA:0001202") "Multi-tissue structure that is comprised of neural and non-neural epithelial layers which will form the retina and retinal pigmented epithelium of the mature eye[ZFA]. double walled structured formed by expansion and invagination of the distal end of the optic vesicle that develops into the pigmented and sensory layers of the retina while the mouth of the optic cup eventually forms the pupil of the eye[MP].") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000167") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0030223693 Liem KF, Bemis WE, Walker WF, Grande L, Functional Anatomy of the Vertebrates: An Evolutionary Perspective (2001) p.429"^^xsd:string) "(...) an essentially similar sequence of events occurs during the embryonic development of the vertebrate eye. The eye initially develops as a single median evagination of the diencephalon that soon bifurcates to form the paired optic vesicles. As each optic vesicle grows towards the body surface, its proximal part narrows as the optic stalk, and its distal part invaginates to form a two-layered optic cup.[well established][VHOG]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0005351") AnnotationAssertion( "EHDAA2:0001303") AnnotationAssertion( "EHDAA:2912") AnnotationAssertion( "EMAPA:16674") AnnotationAssertion( "NCIT:C34233") AnnotationAssertion( "TAO:0001202") AnnotationAssertion(Annotation( "ncithesaurus:Optic_Cup") "UMLS:C0231109") AnnotationAssertion( "VHOG:0000167") AnnotationAssertion( "ZFA:0001202") AnnotationAssertion( "uberon") AnnotationAssertion( "eye cup") AnnotationAssertion(Annotation( "BTO:0005351") "eyecup") AnnotationAssertion(Annotation( "VHOG:0000167") "ocular cup") AnnotationAssertion(Annotation( "BTO:0005351") "ophtalmic cup") AnnotationAssertion( "UBERON:0003072") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "optic cup") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "ZFA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "ZFA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lens placode) AnnotationAssertion(Annotation( ) Annotation( "ZFIN:curator"^^xsd:string) "A thickened portion of ectoderm which serves as the precursor to the lens. SOX2 and Pou2f1 are involved in its development[WP].") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0000122") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "Ectodermal primordium of the lens of the eye. Kimmel et al, 1995.[TAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000166") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0030223693 Liem KF, Bemis WE, Walker WF, Grande L, Functional Anatomy of the Vertebrates: An Evolutionary Perspective (2001) p.429"^^xsd:string) "(...) an essentially similar sequence of events occurs during the embryonic development of the vertebrate eye. The eye initially develops as a single median evagination of the diencephalon that soon bifurcates to form the paired optic vesicles. As each optic vesicle grows towards the body surface, its proximal part narrows as the optic stalk, and its distal part invaginates to form a two-layered optic cup. (...) The optic cup induces the overlying surface ectoderm first to thicken as a lens placode and then to invaginate and form a lens vesicle that differentiates into the lens.[well established][VHOG]") AnnotationAssertion(Annotation( "NCBIBook:NBK53175"^^xsd:string) "Classical transplantation experiments using amphibian embryos suggested that the optic vesicle is the source of lens-inducing signals sufficient to generate lens tissues in competent ectoderm (reviewed in Grainger et al., 1996). More recent findings suggest a multistep model for lens induction. There is now good evidence that lens specification occurs at the neurula stage, before the optic vesicle contact the surface ectoderm, and that neural crest cell migration in the frontonasal region is required to restrict the position of the lens placode (Bailey et al., 2006)") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0011055") AnnotationAssertion( "EFO:0003494") AnnotationAssertion( "EHDAA2:0000982") AnnotationAssertion( "EHDAA:2908") AnnotationAssertion( "EMAPA:16672") AnnotationAssertion( "FMA:296767") AnnotationAssertion( "NCIT:C34202") AnnotationAssertion( "TAO:0000122") AnnotationAssertion(Annotation( "ncithesaurus:Lens_Placodes") "UMLS:C1517770") AnnotationAssertion( "VHOG:0000166") AnnotationAssertion( "XAO:0000240") AnnotationAssertion( "ZFA:0000122") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "ZFA:0000122") Annotation( ) "lens placodes") AnnotationAssertion(Annotation( ) Annotation( ) "placoda lentis") AnnotationAssertion( "UBERON:0003073") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "lens placode") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/2/2f/Gray864.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "NCBIBook:NBK53175"^^xsd:string) ) SubClassOf(Annotation( "ZFA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (mesonephric duct) AnnotationAssertion(Annotation( ) Annotation( ) Annotation( "ZFIN:curator"^^xsd:string) "Paired organ that connects the primitive kidney Wolffian body (or mesonephros) to the cloaca and serves as the anlage for certain male reproductive organs. the Wolffian duct is what remains of the pronephric duct after the atrophy of the pronephros[WP]. In Zebrafish: Duct of the adult kidney (mesonephros), present bilaterally ventral to the somites and leading to the cloacal chamber[ZFA].") AnnotationAssertion( "Consider adding subclasses for male and female specific variants") AnnotationAssertion( "TODO - mesonephric portion of the nephric duct") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0000637") Annotation( "AAO"^^xsd:string) Annotation( "AAO:BJB"^^xsd:string) "Anatomical structure consisting of either of a pair of longitudinal ducts which carry urine and in males, sperm, to the cloaca.[AAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000082") Annotation( "VHOG"^^xsd:string) Annotation( ) "The first-formed kidney duct, which drains the kidney of most anamniotes and becomes the ductus deferens of male amniotes. [Bemis_WE, Functional_Anatomy_of_the_Vertebrates:_An_Evolutionary_Perspective, Glossary_G-3, Grande_L, Liem_KF, Third_Edition_(2001)_Orlando_Fla.:_Harcourt_College_Publishers, Walker_WF][VHOG]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000082") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0030223693 Liem KF, Bemis WE, Walker WF, Grande L, Functional Anatomy of the Vertebrates: An Evolutionary Perspective (2001) p.686") "(...) in all craniates, the archinephric duct develops in embryogeny.[well established][VHOG]") AnnotationAssertion( "In the male the Wolffian duct persists, and forms for example the epididymis, the ductus deferens, the ejaculatory duct, seminal vesicle and efferent ducts.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0000637") AnnotationAssertion( "EHDAA2:0001243") AnnotationAssertion( "EHDAA:1590") AnnotationAssertion( "EMAPA:16577") AnnotationAssertion( "GAID:1315") AnnotationAssertion( "MESH:A16.254.940") AnnotationAssertion( "NCIT:C26469") AnnotationAssertion( "TAO:0000546") AnnotationAssertion(Annotation( "ncithesaurus:Mesonephric_Duct") "UMLS:C0043204") AnnotationAssertion( "VHOG:0000082") AnnotationAssertion( "XAO:0000242") AnnotationAssertion( "ZFA:0000546") AnnotationAssertion(Annotation( ) Annotation( "GOC:yaf") Annotation( "ZFA:0000546") "Wolffian duct") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "Leydig's duct") AnnotationAssertion(Annotation( ) Annotation( "VHOG:0000082") "archinephric duct") AnnotationAssertion(Annotation( ) Annotation( ) "ductus mesonephricus; ductus Wolffi") AnnotationAssertion( "renal duct") AnnotationAssertion( "UBERON:0003074") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "mesonephric duct") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/6/6d/Gray1109.png"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "GO"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (neural plate) AnnotationAssertion(Annotation( ) Annotation( "ISBN:0815318960") Annotation( "OMD:neural+plate") Annotation( "ZFIN:curator"^^xsd:string) "A region of embryonic ectodermal cells that lie directly above the notochord. During neurulation, they change shape and produce an infolding of the neural plate (the neural fold) that then seals to form the neural tube[XAO]. The earliest recognizable dorsal ectodermal primordium of the central nervous system present near the end of gastrulation before infolding to form the neural keel; consists of a thickened pseudostratified epithelium[ZFA].") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0000132") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "The earliest recognizable dorsal ectodermal primordium of the central nervous system present near the end of gastrulation before infolding to form the neural keel; consists of a thickened pseudostratified epithelium. Kimmel et al, 1995.[TAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000068") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0030223693 Liem KF, Bemis WE, Walker WF, Grande L, Functional Anatomy of the Vertebrates: An Evolutionary Perspective (2001) p.28"^^xsd:string) "(...) at some stage of its development, every chordate exhibits five uniquely derived characters or synapomorphies of the group: (...) (4) a single, tubular nerve cord that is located dorsal to the notochord (...).[well established][VHOG]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0011072") AnnotationAssertion( "BTO:0001765") AnnotationAssertion( "DHBA:10153") AnnotationAssertion( "DMBA:15565") AnnotationAssertion( "EHDAA:346") AnnotationAssertion( "EHDAA:902") AnnotationAssertion( "EMAPA:35593") AnnotationAssertion( "FMA:293879") AnnotationAssertion( "NCIT:C34225") AnnotationAssertion( "RETIRED_EHDAA2:0001252") AnnotationAssertion( "TAO:0000132") AnnotationAssertion(Annotation( "ncithesaurus:Neural_Plate") "UMLS:C0920623") AnnotationAssertion( "VHOG:0000068") AnnotationAssertion( "XAO:0000249") AnnotationAssertion( "ZFA:0000132") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "lamina neuralis") AnnotationAssertion( "presumptive central nervous system") AnnotationAssertion( "UBERON:0003075") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "neural plate") AnnotationAssertion( "Neural:Crest.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "Wikipedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "Bgee:AN"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (posterior neural tube) AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001383") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0030223693 Liem KF, Bemis WE, Walker WF, Grande L, Functional Anatomy of the Vertebrates: An Evolutionary Perspective (2001) p.28"^^xsd:string) "(...) at some stage of its development, every chordate exhibits five uniquely derived characters or synapomorphies of the group: (...) (4) a single, tubular nerve cord that is located dorsal to the notochord (...).[well established][VHOG]") AnnotationAssertion( "AAO:0011082") AnnotationAssertion( "TAO:0007037") AnnotationAssertion( "VHOG:0001383") AnnotationAssertion( "XAO:0000250") AnnotationAssertion( "ZFA:0007037") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003076") AnnotationAssertion(rdfs:label "posterior neural tube") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses(Annotation( "lexical"^^xsd:string) ) # Class: (paraxial mesoderm) AnnotationAssertion(Annotation( ) Annotation( "GO:0048339") "The paraxial mesoderm is the mesoderm located bilaterally adjacent to the notochord and neural tube[GO].") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0010568") Annotation( "AAO"^^xsd:string) Annotation( "AAO:EJS"^^xsd:string) "Mesoderm lateral to the neural tube and notochord that is divided into cranial and post-cranial portions. The trunk portions further segment into somites.[AAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000114") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "DOI:10.1002/dvdy.21177 Kusakabe R and Kuratani S. Evolutionary perspectives from development of mesodermal components in the lamprey. Developmental dynamics (2007)") "Presently, Cephalochordata, Urochordata, and Vertebrata are placed as subphyla of the phylum Chordata, in which the overall organization of embryonic tissues (dorsal hollow nerve cord, ventral digestive tract, axial notochord, and bilateral paraxial mesoderm) is largely conserved. In contrast, the echinoderms and hemichordates are sister groups of the chordates and they lack the notochord and paraxial mesoderm. Thus, the basic mesodermal organization of vertebrates must have appeared first in the common ancestor of the chordates.[well established][VHOG]") AnnotationAssertion(Annotation( "ZFA"^^xsd:string) "note that all AOs differ in the relationship between this structure and the mesoderm; in ZFA it is a subclass (and this is implied by the GO definition and GO relationships), in AAO it is part of, and in EHDAA2 it develops from the mesoderm (but in EHDAA2 the naming convention is to use 'paraxial mesenchyme', rather than 'paraxial mesoderm'). Also in ZFA it is part of the trunk whereas this conflicts with the division into head and trunk in ehdaa2 (which we follow here)") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010568") AnnotationAssertion( "EFO:0003515") AnnotationAssertion( "EMAPA:16183") AnnotationAssertion( "EMAPA:16751") AnnotationAssertion( "FMA:293145") AnnotationAssertion( "NCIT:C34244") AnnotationAssertion( "TAO:0000255") AnnotationAssertion(Annotation( "ncithesaurus:Paraxial_Mesoderm") "UMLS:C1284009") AnnotationAssertion( "VHOG:0000114") AnnotationAssertion( "XAO:0000259") AnnotationAssertion( "ZFA:0000255") AnnotationAssertion(Annotation( ) Annotation( ) Annotation( "ZFA:0000255") "paraxial mesenchyme") AnnotationAssertion(Annotation( "ISBN:9780878932504") "somitic mesoderm") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "mesoderma paraxiale") AnnotationAssertion( "UBERON:0003077") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "paraxial mesoderm") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/6/64/Gray19_with_color.png"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "Bgee:AN"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (epibranchial placode) AnnotationAssertion(Annotation( "VHOG:0000117") "Focal thickenings of the embryonic ectoderm that form immediately dorsal and caudal of the clefts between the pharyngeal arches and that produce the neuroblasts that migrate and condense to form the distal cranial ganglia.") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000117") Annotation( "VHOG"^^xsd:string) Annotation( ) "Focal thickenings of the embryonic ectoderm that form immediately dorsal and caudal of the clefts between the pharyngeal arches and that produce the neuroblasts that migrate and condense to form the distal cranial ganglia. [Graham_A, The_development_and_evolution_of_the_pharyngeal_arches._J_Anat_(2001)_199:_133-141][VHOG]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000117") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "DOI:10.1046/j.1469-7580.2001.19910133.x Graham A, The development and evolution of the pharyngeal arches. J Anat (2001)") "These (the epibranchial placodes) are focal thickenings of the embryonic ectoderm that form immediately dorsal and caudal of the clefts between the pharyngeal arches in all vertebrates, and they produce the neuroblasts which migrate and condense to form the distal cranial ganglia: the geniculate, petrosal and nodose ganglia. (...) The one substantial difference between the vertebrate pharyngeal arches and those of the protochordates is the presence of the epibranchial placodes but the evolution of these structures was undoubtedly driven by the endoderm.[well established][VHOG]") AnnotationAssertion(Annotation( "NCBIBook:NBK53175"^^xsd:string) "Epibranchial placodes-derived neurons innervate internal organs to transmit information such as heart rate, blood pressure, and visceral distension from the periphery to the central nervous system (Baker and Bronner-Fraser, 2001). From rostral to caudal the epibranchial placodes comprise the geniculate, petrosal, and nodose placodes, each associated in sequence with the first, second and third branchial clefts. Each placode contributes sensory neurons to cranial nerves VII (facial nerve), IX (glossopharyngeal nerve), and X (vagal nerve), respectively") AnnotationAssertion(Annotation( "XAO"^^xsd:string) "in XAO this develops_from dorsolateral placode, but in NBK53175, this is a separate group") AnnotationAssertion( "AAO:0011036") AnnotationAssertion( "EFO:0003455") AnnotationAssertion( "FMA:293968") AnnotationAssertion( "TAO:0001294") AnnotationAssertion( "VHOG:0000117") AnnotationAssertion( "XAO:0000284") AnnotationAssertion( "ZFA:0001294") AnnotationAssertion(Annotation( "ZFA:0001294") Annotation( ) "epibranchial placodes") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "ISBN:0471888893"^^xsd:string) "ventrolateral placode") AnnotationAssertion( "UBERON:0003078") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "epibranchial placode") SubClassOf(Annotation( "NCBIBook:NBK53175"^^xsd:string) Annotation( "ZFA"^^xsd:string) ) SubClassOf(Annotation( "ZFA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2-abduced") ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (floor plate) AnnotationAssertion(Annotation( ) Annotation( ) Annotation( "GO:0021508") Annotation( "MGI:anna"^^xsd:string) "The specialized glial structure (non-neuronal cells) situated at the ventral midline of the embryonic neural tube; this structure spans the anteroposterior axis from the midbrain to the tail regions, separating the left and right basal plates of the developing neural tube, and serves as an organizer to ventralize tissues in the embryo as well as to guide neuronal positioning and differentiation along the dorsoventral axis of the neural tube.") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0011041") Annotation( "AAO"^^xsd:string) Annotation( ) Annotation( "GO:0021508") "Organizing center consisting of a small group of cells located at the ventral midline of the neural tube that influences the development of the nervous system, governing the specification of neuronal cell types and directing axonal trajectories.[AAO]") AnnotationAssertion( "although this is classically defined as being located on the neural tube, in many AOs the floor plate continues post-embryonically after the neural tube has ceased to exist. Consider 'floor plate of neural tube'.") AnnotationAssertion(Annotation( ) "A structure integral to the developing nervous system of vertebrate organisms. Located on the ventral midline of the embryonic neural tube, the floor plate is a specialized glial structure that spans the anteroposterior axis from the midbrain to the tail regions. It has been shown that the floor plate is conserved among vertebrates with homologous structures in invertebrates such as the fruit fly Drosophila and the nematode C. elegans. Functionally, the structure serves as an organizer to ventralize tissues in the embryo as well as to guide neuronal positioning and differentiation along the dorsoventral axis of the neural tube.") AnnotationAssertion( ) AnnotationAssertion( "AAO:0011041") AnnotationAssertion( "BTO:0001720") AnnotationAssertion( "EFO:0003473") AnnotationAssertion( "EMAPA:32684") AnnotationAssertion( "RETIRED_EHDAA2:0000545") AnnotationAssertion( "TAO:0000022") AnnotationAssertion( "ZFA:0000022") AnnotationAssertion( "floorplate") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "TAO:0000022") "FP") AnnotationAssertion(Annotation( "BTO:0001720") "bodenplatte") AnnotationAssertion(Annotation( "BTO:0001720") "ventral plate") AnnotationAssertion( "UBERON:0003079") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "floor plate") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/8/89/Gray642.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "Wikipedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (anterior neural tube) AnnotationAssertion( "TODO - add grouping class for the anterior end of the neural tube at all stages") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001384") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0030223693 Liem KF, Bemis WE, Walker WF, Grande L, Functional Anatomy of the Vertebrates: An Evolutionary Perspective (2001) p.28"^^xsd:string) "(...) at some stage of its development, every chordate exhibits five uniquely derived characters or synapomorphies of the group: (...) (4) a single, tubular nerve cord that is located dorsal to the notochord (...).[well established][VHOG]") AnnotationAssertion( "AAO:0011012") AnnotationAssertion( "TAO:0007038") AnnotationAssertion( "VHOG:0001384") AnnotationAssertion( "XAO:0000307") AnnotationAssertion( "ZFA:0007038") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003080") AnnotationAssertion(rdfs:label "anterior neural tube") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lateral plate mesoderm) AnnotationAssertion(Annotation( ) Annotation( "MP:0010117") "Portion of the middle of the three primary germ layers of the embryo that resides on the periphery of the embryo, is continuous with the extra-embryonic mesoderm, splits into two layers enclosing the intra-embryonic coelom, and gives rise to body wall structures[MP].") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0010574") Annotation( "AAO"^^xsd:string) Annotation( "AAO:EJS"^^xsd:string) "Portion of mesoderm traditionally thought to give rise to limb bones and parts of the girdles.[AAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000118") Annotation( "VHOG"^^xsd:string) Annotation( ) "The portion of the mesoderm of the trunk of vertebrate embryos lying lateral to the intermediate mesoderm. [...] [It] subdivides into two plates: one dorsal, called the somatopleure, and one ventral, called the splanchnopleure. [Gastrulation:_From_cells_to_embryo_(2004)_Cold_Spring_Harbor, Glossary_XV, New_York:_Cold_Spring_Harbor_Laboratory_Press, Stern_CD][VHOG]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000118") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "DOI:10.1073/pnas.97.9.4449 Shimeld SM and Holland PW. Vertebrate innovations. PNAS (2000)") "A ventrolateral zone of amphioxus mesoderm grows down to surround the gut. Homology of this zone to the lateral plate mesoderm of vertebrates is supported by site of origin and fate.[well established][VHOG]") AnnotationAssertion(Annotation( "ZFA"^^xsd:string) "subclass of mesoderm in ZFA.") AnnotationAssertion( "UBERON:0006258") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010574") AnnotationAssertion( "EHDAA2:0000919") AnnotationAssertion( "EHDAA:379") AnnotationAssertion( "EMAPA:16179") AnnotationAssertion( "FMA:293149") AnnotationAssertion( "NCIT:C34199") AnnotationAssertion( "TAO:0000121") AnnotationAssertion(Annotation( "ncithesaurus:Lateral_Mesoderm") "UMLS:C1517749") AnnotationAssertion( "VHOG:0000118") AnnotationAssertion( "XAO:0000311") AnnotationAssertion( "ZFA:0000121") AnnotationAssertion(Annotation( "ZFA:0000121") Annotation( ) "LPM") AnnotationAssertion(Annotation( "GO:0048368") "lateral mesoderm") AnnotationAssertion( "uberon") AnnotationAssertion( "lateral plate") AnnotationAssertion(Annotation( "EHDAA2:0000919") "lateral plate mesenchyme") AnnotationAssertion(Annotation( ) Annotation( ) "mesoderma laminae lateralis") AnnotationAssertion( "UBERON:0003081") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "lateral plate mesoderm") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/6/64/Gray19_with_color.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) Annotation( "VHOG"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (myotome) AnnotationAssertion(Annotation( "AEO:0001018") "A transitional population of migrating mesenchymal cells that derive from somites and that will become muscle cells.") AnnotationAssertion( "The term 'myotome' is also used to describe the muscles served by a single nerve root / spinal segment - consider adding new class, myomere.") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0001056") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "Portion of the somites giving rise to body wall muscle masses. Kimmel et al, 1995.[TAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001244") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "DOI:10.1038/sj.embor.embor920 Hollway GE, Currie PD, Myotome meanderings. Cellular morphogenesis and the making of muscle. EMBO Rep.(2003)") "In all vertebrates, the skeletal muscle of the body axis is chiefly derived from an early embryonic compartment, known as the myotome.[well established][VHOG]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0011067") AnnotationAssertion( "AEO:0001018") AnnotationAssertion( "BTO:0000742") AnnotationAssertion( "EHDAA2_RETIRED:0003431") AnnotationAssertion( "EHDAA:1721") AnnotationAssertion( "EHDAA:1727") AnnotationAssertion( "EHDAA:1733") AnnotationAssertion( "EHDAA:1739") AnnotationAssertion( "EMAPA:32841") AnnotationAssertion( "FMA:295658") AnnotationAssertion( "NCIT:C34214") AnnotationAssertion( "TAO:0001056") AnnotationAssertion(Annotation( "ncithesaurus:Myotome_Region") "UMLS:C1513802") AnnotationAssertion( "VHOG:0001244") AnnotationAssertion( "XAO:0000315") AnnotationAssertion( "ZFA:0001056") AnnotationAssertion(Annotation( "TAO:0001056") Annotation( ) "myomeres") AnnotationAssertion( "uberon") AnnotationAssertion( "muscle plate") AnnotationAssertion( "myomere") AnnotationAssertion( "myotome region") AnnotationAssertion( "myotomes") AnnotationAssertion(Annotation( ) Annotation( ) "myotomus") AnnotationAssertion( "UBERON:0003082") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "myotome") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/9/96/Gray65.png"^^xsd:anyURI) SubClassOf(Annotation( "AEO"^^xsd:string) ) SubClassOf(Annotation( "EHDAA2-abduced") ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (trunk neural crest) AnnotationAssertion(Annotation( ) Annotation( "ISBN:0815318960") "Trunk portion of the neural crest. The trunk neural crest lies between the vagal and sacral neural crest and gives rise to two groups of cells. One group migrates dorsolateral and populates the skin, forming pigment cells and the other migrates ventrolateral through the anterior sclerotome to become the epinephrine-producing cells of the adrenal gland and the neurons of the sympathetic nervous system. Some cells remain in the sclerotome to form the dorsal root ganglia [Wikipedia].") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0010582") Annotation( "AAO"^^xsd:string) Annotation( "AAO:EJS"^^xsd:string) "Post-cranial portion of the neural crest. Exact anatomical derivations not experimentally resolved in amphibians.[AAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000062") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0030223693 Liem KF, Bemis WE, Walker WF, Grande L, Functional Anatomy of the Vertebrates: An Evolutionary Perspective (2001) p.43") "We conclude this section by listing some of the many synapomorphies of craniates, including (1) the neural crest (...).[well established][VHOG]") AnnotationAssertion( ) AnnotationAssertion( "AAO:0010582") AnnotationAssertion( "EFO:0003605") AnnotationAssertion( "EHDAA2:0001901") AnnotationAssertion( "TAO:0001024") AnnotationAssertion( "VHOG:0000062") AnnotationAssertion( "XAO:0000319") AnnotationAssertion( "ZFA:0001024") AnnotationAssertion(Annotation( "XAO:0000319") Annotation( ) "TNC") AnnotationAssertion( "uberon") AnnotationAssertion( "trunk crest") AnnotationAssertion( "UBERON:0003083") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "trunk neural crest") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "ZFA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (heart primordium) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Bilateral groups of cells consisting of three rows: one row of endocardial precursors medially and two rows of myocardical precursors laterally. The two populations fuse at the midline to form the heart rudiment or cone.") AnnotationAssertion( "should probably be merged with heart rudiment.") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0000028") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "Bilateral groups of cells consisting of three rows: one row of endocardial precursors medially and two rows of myocardical precursors laterally. The two populations fuse at the midline between 21 and 26 somites to form the heart rudiment or cone. Stainier 2001.[TAO]") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0011044") Annotation( "AAO"^^xsd:string) Annotation( "XAO:curator") "The fused aspects of ventral mesoderm, which have migrated from either side of the prechordal plate, and fused ventrally, just behind the cement gland. They will give rise to the endocardium at NF stage 27&28.[AAO]") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0000028") Annotation( "TAO"^^xsd:string) "relationship loss: develops_from lateral mesoderm (TAO:0001065)[TAO]") AnnotationAssertion( ) AnnotationAssertion( "AAO:0011044") AnnotationAssertion( "BTO:0001887") AnnotationAssertion( "NCIT:C34276") AnnotationAssertion( "TAO:0000028") AnnotationAssertion(Annotation( "ncithesaurus:Primordium_of_the_Heart") "UMLS:C1514450") AnnotationAssertion( "XAO:0000336") AnnotationAssertion( "ZFA:0000028") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "ZFA:0000028") "cardiac field") AnnotationAssertion( "fused heart primordium") AnnotationAssertion( "UBERON:0003084") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "heart primordium") SubClassOf(Annotation( "Obol") ) SubClassOf(Annotation( "ZFA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "ZFA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "XAO"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (ventral aorta) AnnotationAssertion(Annotation( "GO:0035908") "The ventral aorta is a blood vessel in a single-pass circulatory system that carries de-oxygenated blood from the heart to the gills. In a single-pass circulatory system blood passes once through the heart to supply the body once[GO].") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0000604") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "Outflow artery from the heart to the aortic arches. Kimmel et al, 1995.[TAO]") AnnotationAssertion(Annotation( "BTO:0004674") "The artery in vertebrate embryos that carries blood from the ventricle of the heart to the aortic arches. In adult fish it branches into afferent branchial arteries supplying the gills. In adult tetrapods it is represented by the ascending part of the aorta.") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000121") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0030223693 Liem KF, Bemis WE, Walker WF, Grande L, Functional Anatomy of the Vertebrates: An Evolutionary Perspective (2001) p.620") "When vertebrates first appeared, they must have possessed a ventral and dorsal aorta with aortic arches between them.[well established][VHOG]") AnnotationAssertion( "AAO:0010412") AnnotationAssertion( "BTO:0004674") AnnotationAssertion( "TAO:0000604") AnnotationAssertion( "VHOG:0000121") AnnotationAssertion( "XAO:0000338") AnnotationAssertion( "ZFA:0000604") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003085") AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "Taxon notes (via vHOG): \"When vertebrates first appeared, they must have possessed a ventral and dorsal aorta with aortic arches between them.\" Liem KF, Bemis WE, Walker WF, Grande L, Functional Anatomy of the Vertebrates: An Evolutionary Perspective, Third Edition (2001) Orlando Fla.: Harcourt College Publishers, p.620. // in Reptiles, splits to form bases of 3 arteries: left aortic arch, right aortic arch and pulmonary trunk. In birds, the right systemic arch becomes predominant, the left never fully develops [Kardong]") AnnotationAssertion(rdfs:label "ventral aorta") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (anterior cardinal vein) AnnotationAssertion(Annotation( ) Annotation( "ISBN:0073040584"^^xsd:string) Annotation( "MP:0004784") "One of the the two paired cardinal veins draining the cephalic part of the body.") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0011011") Annotation( "AAO"^^xsd:string) Annotation( ) "The anterior cardinal vein returns blood from the dorsal head and drains into the duct of Cuvier via the pronephric sinus.[AAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000113") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0072528305 Kardong KV, Vertebrates: Comparative Anatomy, Function, Evolution (2006) p.462") "In primitive vertebrates, the basic early embryonic pattern is retained, and blood from anterior and posterior systemic tissues is returned in anterior and posterior cardinal veins, both pairs of veins uniting in common cardinal veins near the heart. In derived vertebrates, the cardinals appear but usually persist only in the embryo, being functionally replaced by alternative adult vessels, the precava and postcava (anterior and posterior venae cavae).[well established][VHOG]") AnnotationAssertion( "UBERON:0009770") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0011011") AnnotationAssertion( "BTO:0004387") AnnotationAssertion( "EHDAA:1312") AnnotationAssertion( "EMAPA:16241") AnnotationAssertion( "FMA:70309") AnnotationAssertion( "NCIT:C34108") AnnotationAssertion( "TAO:0000423") AnnotationAssertion(Annotation( "ncithesaurus:Anterior_Cardinal_Vein") "UMLS:C0231086") AnnotationAssertion( "VHOG:0000113") AnnotationAssertion( "XAO:0000383") AnnotationAssertion( "ZFA:0000423") AnnotationAssertion(Annotation( "ZFA:0000423") "rostral cardinal vein") AnnotationAssertion( "uberon") AnnotationAssertion( "ACV") AnnotationAssertion(Annotation( ) Annotation( "FMA:70309") "precardinal vein") AnnotationAssertion( "rostral cardinal veins") AnnotationAssertion(Annotation( ) "superior cardinal vein") AnnotationAssertion( "UBERON:0003087") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "contribute to the formation of the internal jugular veins and together with the common cardinal vein form the superior vena cava. In an anastomosis by anterior cardinal veins, the left brachiocephalic vein is produced[WP]") AnnotationAssertion(rdfs:label "anterior cardinal vein") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (sclerotome) AnnotationAssertion(Annotation( ) Annotation( ) Annotation( "XB:curator") "Ventral somitic compartment that is a precursor of the axial skeleton[XAO]. Sclerotomes eventually differentiate into the vertebrae and most of the skull. The caudal (posterior) half of one sclerotome fuses with the rostral (anterior) half of the adjacent one to form each vertebra. From their initial location within the somite, the sclerotome cells migrate medially towards the notochord. These cells meet the sclerotome cells from the other side to form the vertebral body. From this vertebral body, sclerotome cells move dorsally and surround the developing spinal cord, forming the vertebral arch[WP].") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0010571") Annotation( "AAO"^^xsd:string) Annotation( "AAO:EJS"^^xsd:string) "Skeletogenic portion of somites.[AAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000680") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "DOI:10.1073/pnas.97.9.4449 Shimeld SM and Holland PW. Vertebrate innovations. PNAS (2000)") "The vertebrate sclerotome has no equivalent in amphioxus and is a novelty linked with the evolution of the axial skeleton.[well established][VHOG]") AnnotationAssertion(Annotation( "XAO"^^xsd:string) "part_of somite in XAO") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010571") AnnotationAssertion( "AEO:0000212") AnnotationAssertion( "EHDAA2:0003439") AnnotationAssertion( "EMAPA:31159") AnnotationAssertion( "FMA:295652") AnnotationAssertion( "NCIT:C34287") AnnotationAssertion( "TAO:0001080") AnnotationAssertion(Annotation( "ncithesaurus:Sclerotome") "UMLS:C0183176") AnnotationAssertion( "VHOG:0000680") AnnotationAssertion( "XAO:0000397") AnnotationAssertion( "ZFA:0001080") AnnotationAssertion(Annotation( "TAO:0001080") Annotation( ) "sclerotomes") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "sclerotomus") AnnotationAssertion( "UBERON:0003089") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "sclerotome") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/9/96/Gray65.png"^^xsd:anyURI) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ) SubClassOf(Annotation( "ZFA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (thyroid primordium) AnnotationAssertion(Annotation( ) "The initial thyroid precursor, the thyroid primordium, starts as a simple midline thickening and develops to form the thyroid diverticulum. This structure is initially hollow, although it later solidifies and becomes bilobed. The 2 lobes are located on either side of the midline and are connected via an isthmus.") AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Portion of tissue part of the pharyngeal endoderm that is fated to become thyroid follicle[ZFIN:curator].") AnnotationAssertion(Annotation( ) "In all vertebrates the thyroid arises from the ventral aspect of the second pouch") AnnotationAssertion(Annotation( "EHDAA2"^^xsd:string) "Note that we follow EHDAA2 in dividing this into endoderm and mesenchyme. In this ontology we place the broad developmental relationship at this level, and include specific relationships to the pharyngeal endoderm at the level of the endoderm") AnnotationAssertion( ) AnnotationAssertion( "AAO:0011106") AnnotationAssertion( "BTO:0004709") AnnotationAssertion( "EHDAA2:0002033") AnnotationAssertion( "EHDAA:952") AnnotationAssertion( "EMAPA:16361") AnnotationAssertion( "NCIT:C34312") AnnotationAssertion( "TAO:0001081") AnnotationAssertion(Annotation( "ncithesaurus:Thyroid_Primordium") "UMLS:C1519512") AnnotationAssertion( "XAO:0000444") AnnotationAssertion( "ZFA:0001081") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "ZFA:0001081") Annotation( ) "thyroid primordia") AnnotationAssertion( "UBERON:0003091") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "thyroid primordium") SubClassOf(Annotation( "ZFA"^^xsd:string) ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "ZFA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "VHOG"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (ultimobranchial body) AnnotationAssertion(Annotation( ) Annotation( "ISBN:0073040584"^^xsd:string) Annotation( "MP:0003955") "An outpocketing of one of the caudal pharyngeal pouches that is comprised on calcitonin-producing parafollicular cells.") AnnotationAssertion( "TODO - ensure developmental relationships correct across species. WP says pouch 4, but this isn't supported by Kardong (table 13.1 or fig 15.5). MP says 'fifth pouch in human or as the ventral component of the fourth pouch in mouse'. EHDAA2 says 6th arch mesenchyme http://www.ncbi.nlm.nih.gov/pubmed/16313389 says: the most posterior pouch generates the ultimobranchial bodies in most vertebrate classes, but mammals do not contain this structure") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0010547") Annotation( "AAO"^^xsd:string) Annotation( "AAO:BJB"^^xsd:string) "Anatomical structure which includes small, calcitonin producing glands originating as epithelial growths from the sixth pharyngeal pouch.[AAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001185") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( ) "The glandular tissue originating from the fifth branchial pouch which combines with the buccal cavity outgrowth to form the thyroid and contributes calcitonin-secreting cells to the gland. [TFD][VHOG]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001185") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0030223693 Liem KF, Bemis WE, Walker WF, Grande L, Functional Anatomy of the Vertebrates: An Evolutionary Perspective (2001) p.523") "(...) ultimobranchial bodies that develop in all vertebrates from the ventral or posterior surface of the last pair of pharyngeal pouches. The ultimobranchial bodies are vestigial in most mammals (...).[well established][VHOG]") AnnotationAssertion(Annotation( "WP,unvetted") "In humans, the ultimobranchial body is an embryological structure that gives rise to the calcitonin-producing cells - also called parafollicular cells or clear cells - of the thyroid gland. In humans, this body is a derivative of the ventral recess of the fourth pharyngeal pouch (or fifth)") AnnotationAssertion( "The ultimobranchial bodies of lower vertebrates contain large amounts of calcitonin. In mammals the bodies fuse with the thyroid gland and are thought to develop into the parafollicular cells. (Stedman, 25th ed)") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010547") AnnotationAssertion( "EHDAA2:0002103") AnnotationAssertion( "EHDAA:2987") AnnotationAssertion( "EHDAA:9139") AnnotationAssertion( "EMAPA:36030") AnnotationAssertion( "GAID:1246") AnnotationAssertion( "MESH:D014460") AnnotationAssertion( "TAO:0001448") AnnotationAssertion( "VHOG:0001185") AnnotationAssertion( "XAO:0000452") AnnotationAssertion( "ZFA:0001448") AnnotationAssertion(Annotation( ) Annotation( ) "corpus ultimopharyngeum") AnnotationAssertion(Annotation( ) "ultimobranchial gland") AnnotationAssertion(Annotation( ) "ultimopharyngeal body") AnnotationAssertion(Annotation( ) "ultimopharyngeal gland") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "postbranchial body") AnnotationAssertion(Annotation( "MP:0003955") "telobranchial body") AnnotationAssertion(Annotation( "MP:0003955") "telopharyngeal body") AnnotationAssertion(Annotation( ) "ultimobranchial") AnnotationAssertion(Annotation( ) Annotation( ) "ultimobranchial bodies") AnnotationAssertion( "UBERON:0003092") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "ultimobranchial body") SubClassOf(Annotation( "EHDAA2"^^xsd:string) ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "Wikipedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "ISBN:0073040584"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (optic stalk) AnnotationAssertion(Annotation( "ISBN:0-914294-08-3") Annotation( "MP:0004268") "The narrow, proximal portion of the optic vesicle which connects the embryonic eye and forebrain.") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000223") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( ) "The evagination from the neural tube of the developing embryo which develops the optic cup at its extremity; the stalk persists as the optic nerve. [TFD][VHOG]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000223") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0030223693 Liem KF, Bemis WE, Walker WF, Grande L, Functional Anatomy of the Vertebrates: An Evolutionary Perspective (2001) p.429"^^xsd:string) "(...) an essentially similar sequence of events occurs during the embryonic development of the vertebrate eye. The eye initially develops as a single median evagination of the diencephalon that soon bifurcates to form the paired optic vesicles. As each optic vesicle grows towards the body surface, its proximal part narrows as the optic stalk, and its distal part invaginates to form a two-layered optic cup.[well established][VHOG]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0011077") AnnotationAssertion( "EHDAA2:0001318") AnnotationAssertion( "EHDAA:3816") AnnotationAssertion( "EMAPA:16678") AnnotationAssertion( "NCIT:C34235") AnnotationAssertion( "TAO:0000137") AnnotationAssertion(Annotation( "ncithesaurus:Optic_Stalk") "UMLS:C0231107") AnnotationAssertion( "VHOG:0000223") AnnotationAssertion( "XAO:0000475") AnnotationAssertion( "ZFA:0000137") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "ZFA:0000137") Annotation( ) "optic stalks") AnnotationAssertion(Annotation( ) Annotation( ) "pedunculus opticus") AnnotationAssertion( "UBERON:0003098") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "optic stalk") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/2/2f/Gray864.png"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (cranial neural crest) AnnotationAssertion(Annotation( "MGI:anna"^^xsd:string) "Neural crest cells (NCCs) originating in the anterior part of the developing embryo and residing between the mid-diencephalon and the forming hindbrain; cranial NCCs migrate dorsolaterally to form the craniofacial mesenchyme that differentiates into various craniofacial cartilages and bones, cranial neurons, glia, and connective tissues of the face; these cells enter the pharyngeal pouches and arches where they give rise to thymic cells, bones of the middle ear and jaw (mandible), and the odontoblasts of the tooth primordia; like their counterparts in the trunk, cranial NCCs also contribute to the developing peripheral nervous system, along with the pigmented cell (i.e. melanocyte) lineage.") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0010580") Annotation( "AAO"^^xsd:string) Annotation( "AAO:EJS"^^xsd:string) "Anterior most portion of the neural crest. Migrates in three highly conserved streams: mandibular, hyoid and branchial.[AAO]") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0001194") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "Neural crest that is part of the head.[TAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000063") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0030223693 Liem KF, Bemis WE, Walker WF, Grande L, Functional Anatomy of the Vertebrates: An Evolutionary Perspective (2001) p.43") "We conclude this section by listing some of the many synapomorphies of craniates, including (1) the neural crest (...).[well established][VHOG]") AnnotationAssertion( ) AnnotationAssertion( "AAO:0010580") AnnotationAssertion( "EFO:0003645") AnnotationAssertion( "EHDAA2:0004420") AnnotationAssertion( "EMAPA:16091") AnnotationAssertion( "TAO:0001194") AnnotationAssertion( "VHOG:0000063") AnnotationAssertion( "XAO:0001001") AnnotationAssertion( "ZFA:0001194") AnnotationAssertion(Annotation( "XAO:0001001") Annotation( ) "CNC") AnnotationAssertion(Annotation( "EMAPA:16091") "cephalic neural crest") AnnotationAssertion( "cranial NCC population") AnnotationAssertion( "head NCC population") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "crista neuralis cranialis") AnnotationAssertion( "head crest") AnnotationAssertion( "head neural crest") AnnotationAssertion( "UBERON:0003099") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "cranial neural crest") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (female organism) AnnotationAssertion(Annotation( "CARO:0000028") "Gonochoristic organism that can produce female gametes.") AnnotationAssertion( ) AnnotationAssertion( "AAO:0010030") AnnotationAssertion( "BILA:0000028") AnnotationAssertion( "CARO:0000028") AnnotationAssertion( "FBbt:00007011") AnnotationAssertion( "FMA:67812") AnnotationAssertion( "HAO:0000028") AnnotationAssertion( "TAO:0000303") AnnotationAssertion( "TGMA:0001839") AnnotationAssertion( "XAO:0003005") AnnotationAssertion( "ZFA:0000303") AnnotationAssertion(Annotation( "FMA:67812") Annotation( ) "female human body") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "TAO:0000303") "female") AnnotationAssertion( "UBERON:0003100") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "female organism") SubClassOf( ) DisjointClasses( ) # Class: (male organism) AnnotationAssertion(Annotation( "CARO:0000027") "Gonochoristic organism that can produce male gametes.") AnnotationAssertion( ) AnnotationAssertion( "AAO:0010033") AnnotationAssertion( "BILA:0000027") AnnotationAssertion( "CARO:0000027") AnnotationAssertion( "FBbt:00007004") AnnotationAssertion( "FMA:67811") AnnotationAssertion( "HAO:0000027") AnnotationAssertion( "TAO:0000242") AnnotationAssertion( "TGMA:0001838") AnnotationAssertion( "WBbt:0007850") AnnotationAssertion( "XAO:0003006") AnnotationAssertion( "ZFA:0000242") AnnotationAssertion(Annotation( "FMA:67811") Annotation( ) "male human body") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "TAO:0000242") "male") AnnotationAssertion( "UBERON:0003101") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "male organism") SubClassOf( ) # Class: (surface structure) AnnotationAssertion(Annotation( ) Annotation( ) "Anatomical structure that overlaps the outer epithelial layer and is adjacent to the space surrounding the organism.") AnnotationAssertion( "consider obsoleting. See issue/1305") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0000292") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "Organism subdivision which is the collection of anatomical structures on the body surface.[ZFA]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010337") AnnotationAssertion( "AEO_RETIRED:0000010") AnnotationAssertion( "EHDAA2_RETIRED:0003010") AnnotationAssertion( "TAO:0000292") AnnotationAssertion( "VSAO:0000001") AnnotationAssertion( "XAO:0003028") AnnotationAssertion( "ZFA:0000292") AnnotationAssertion( "galen:SurfaceRegion") AnnotationAssertion(Annotation( "EHDAA2:0003010") "anatomical surface feature") AnnotationAssertion( "uberon") AnnotationAssertion( "surface feature") AnnotationAssertion( "surface region") AnnotationAssertion(Annotation( "ZFA:0000292") Annotation( ) "surface structures") AnnotationAssertion( "UBERON:0003102") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "surface structure") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) SubClassOf( ObjectSomeValuesFrom( )) # Class: (compound organ) AnnotationAssertion(Annotation( "CARO:0000024") "Anatomical structure that has as its parts two or more multi-tissue structures of at least two different types and which through specific morphogenetic processes forms a single distinct structural unit demarcated by bona fide boundaries from other distinct anatomical structures of different types.") AnnotationAssertion( "this class was introduced for consistency with CARO. However, in this ontology we typically classify organs directly under 'organ' rather than subdividing into compound and simple organs") AnnotationAssertion( "AAO:0010015") AnnotationAssertion( "AEO:0000024") AnnotationAssertion( "BILA:0000024") AnnotationAssertion( "CARO:0000024") AnnotationAssertion( "EHDAA2:0003024") AnnotationAssertion( "HAO:0000024") AnnotationAssertion( "TADS:0000598") AnnotationAssertion( "TAO:0000496") AnnotationAssertion( "TGMA:0001837") AnnotationAssertion( "VHOG:0001723") AnnotationAssertion( "XAO:0003041") AnnotationAssertion( "ZFA:0000496") AnnotationAssertion( "uberon") AnnotationAssertion( "organ") AnnotationAssertion( "UBERON:0003103") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "compound organ") SubClassOf( ) # Class: (mesenchyme) AnnotationAssertion(Annotation( ) Annotation( ) Annotation( ) "Portion of tissue composed of mesenchymal cells (motile cells that develop from epthelia via an epithelial to mesenchymal transition) and surrounding extracellular material. Mesenchyme has different embryological origins in different metazoan taxa - in many invertebrates it derives in whole or part from ectoderm. In vertebrates it derives largely from mesoderm, and sometimes the terms are used interchangeably, e.g. lateral plate mesoderm/mesenchyme.") AnnotationAssertion( "the relationship to mesoderm is weaker than develops_from in order to have classes such as 'head mesenchyme from mesoderm' make sense") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0000393") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "A mesh-like cell arrangement, less compact than an epithelium. Kimmel et al, 1995.[TAO]") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0010427") Annotation( "AAO"^^xsd:string) Annotation( "AAO:EJS"^^xsd:string) "Portion of tissue consisting of loosely organized undifferentiated mesodermal cells that give rise to such structures as connective tissues, blood, lymphatics, bone, and cartilage.[AAO]") AnnotationAssertion( "mesenchymal") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010427") AnnotationAssertion( "AEO:0000145") AnnotationAssertion( "BTO:0001393") AnnotationAssertion( "CALOHA:TS-0620") AnnotationAssertion( "EHDAA2:0003145") AnnotationAssertion( "EV:0100007") AnnotationAssertion( "NCIT:C13301") AnnotationAssertion( "TAO:0000393") AnnotationAssertion(Annotation( "ncithesaurus:Mesenchyme") "UMLS:C0162415") AnnotationAssertion( "VHOG:0000170") AnnotationAssertion( "XAO:0003046") AnnotationAssertion( "ZFA:0000393") AnnotationAssertion( "mesenchymal tissue") AnnotationAssertion( "mesenchyme tissue") AnnotationAssertion( "portion of mesenchymal tissue") AnnotationAssertion( "portion of mesenchyme tissue") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "mesenchyma") AnnotationAssertion( "UBERON:0003104") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "mesenchyme") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/f/f4/Mesenchymal_Stem_Cell.jpg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (dorsal lateral plate region) AnnotationAssertion(Annotation( ) Annotation( "ZFIN:curator"^^xsd:string) "Region located near the pronephros and pronephric ducts that is a site of hematopoiesis in the embryo.") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0011008") Annotation( "AAO"^^xsd:string) Annotation( "AAO:EJS"^^xsd:string) "Region located near the pronephros and pronephric ducts that is a site of hematopoiesis in the embryo.[AAO]") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0005028") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "Region where blood progenitor markers are expressed. Probable site of definitive hematopoiesis between 36hpf and 4dpf.[TAO]") AnnotationAssertion( "AAO:0011008") AnnotationAssertion( "XAO:0003051") AnnotationAssertion(Annotation( "XAO:0003051") "DLP") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "XAO:0003051") "AGM region") AnnotationAssertion(Annotation( "XAO:0003051") "aorta-gonads-mesonephros region") AnnotationAssertion( "UBERON:0003105") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "dorsal lateral plate region") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "XAO"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "XAO"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (urostyle) AnnotationAssertion(Annotation( "AAO:0000732") Annotation( "TAO:0000158") "In teleosts: Anatomical cluster that is the result of fusion of preural centrum 1 with one or more adjacent ural centra[AAO]; Rodlike caudal bony structure unique to anurans that lies within a compartment formed by the elongated, anteriorly oriented pelvic girdle. The urostyle is formed by the fusion of the coccyx and the hypochord[AAO].") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0000158") Annotation( "TAO"^^xsd:string) Annotation( "TAO:wd"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "Anatomical cluster that is the result of fusion of preural centrum 1 with one or more adjacent ural centra.[TAO]") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0000732") Annotation( "AAO"^^xsd:string) Annotation( "AAO:Pugener_2002") Annotation( "AAO:Pugener_and_Maglia_2008") "Rodlike caudal bony structure unique to anurans that lies within a compartment formed by the elongated, anteriorly oriented pelvic girdle. The urostyle is formed by the fusion of the coccyx and the hypochord.[AAO]") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0000158") Annotation( "TAO"^^xsd:string) "relationship loss: part_of caudal fin skeleton (VSAO:0000167)[TAO]") AnnotationAssertion(Annotation( "2012-09-06"^^xsd:string) Annotation( "TAO:0000158") Annotation( "TAO"^^xsd:string) Annotation( "Curator"^^xsd:string) "In zebrafish, it is composed of preural vertebra 1 and ural centra 1 and 2. The number of ural centra that become fused with preural centrum 1 varies among teleost subgroups. Because of varying developmental origins the urostyle may not be homologous across species.[TAO]") AnnotationAssertion(Annotation( "TAO"^^xsd:string) "In zebrafish, it is composed of preural vertebra 1 and ural centra 1 and 2. The number of ural centra that become fused with preural centrum 1 varies among teleost subgroups. Because of varying developmental origins the urostyle may not be homologous across species.") AnnotationAssertion( "AAO:0000732") AnnotationAssertion( "TAO:0000158") AnnotationAssertion( "XAO:0003080") AnnotationAssertion( "ZFA:0000158") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "TAO:0000158") "compound caudal centrum") AnnotationAssertion( "compound centrum") AnnotationAssertion(Annotation( "TAO:0000158") "compound terminal centrum") AnnotationAssertion(Annotation( "TAO:0000158") "compound terminal vertebra") AnnotationAssertion( "last vertebra") AnnotationAssertion(Annotation( "TAO:0000158") "terminal centrum") AnnotationAssertion( "ultimate vertebra") AnnotationAssertion( "UBERON:0003106") AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "Grouping with AAO dubious") AnnotationAssertion(rdfs:label "urostyle") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (Meckel's cartilage) AnnotationAssertion(Annotation( ) Annotation( ) "Meckel's cartilage is the bilaterally paired, rod-like, cartilaginous ventral component of the lower jar, or ventral mandibular arch. It is typically resorbed in adults.") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0000289") Annotation( "AAO"^^xsd:string) Annotation( "AAO:LAP"^^xsd:string) "Paired, rod-shaped elements that extend the length of the mandible and lie between the dentaries and the angulosplenials. Can be reduced to various extent in adults.[AAO]") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0001205") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "Pharyngeal arch cartilage that is the cartilaginous embryonic component of the lower jaw, or ventral mandibular arch. It develops into the endochondral articular and retroarticular bones. Meckel's cartilage is paired.[TAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000249") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0878932504 Gilbert SF, Developmental Biology (2006) p.16-17") "In all jawed vertebrates, including fish, the first pharyngeal arch generates the jaw apparatus. The neural crest cells of this arch migrate to form Meckel's cartilage, the precursor of the jaw.[well established][VHOG]") AnnotationAssertion(Annotation( ) "functional lower jaw of Elasmobranchii and Holocephali, the embryonic lower jaw of other gnathostomous vertebrates") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0000289") AnnotationAssertion( "EHDAA2:0001072") AnnotationAssertion( "EHDAA:7997") AnnotationAssertion( "EMAPA:17635") AnnotationAssertion( "FMA:295784") AnnotationAssertion( "MA:0001580") AnnotationAssertion( "TAO:0001205") AnnotationAssertion( "VHOG:0000249") AnnotationAssertion( "XAO:0003085") AnnotationAssertion( "ZFA:0001205") AnnotationAssertion( "Meckels cartilage") AnnotationAssertion(Annotation( ) "cartilago arcus pharyngei primi") AnnotationAssertion(Annotation( ) "primary mandinle") AnnotationAssertion(Annotation( "ZFA:0001205") "ventral mandibular cartilage") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003107") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "Meckel's cartilage") SubClassOf( ) SubClassOf(Annotation( "ZFA"^^xsd:string) ) SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (parapophysis) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Endochondral bone that forms from a lateral outgrowth of the basiventral arcualia and connects the rib with the vertebral centrum[TAO]. A lateral or ventrolateral projections of vertebrae to which ribs are attached in Danio rerio. ZFA: They can arise through replacement ossification of a basiventral or form directly in bone. They are separated from the centrum in basal teleosts, e.g., Leptolepis coryphaenoides, Megalops and Elops.") AnnotationAssertion( "TODO - check") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0001362") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "Endochondral bone that forms from a lateral outgrowth of the basiventral arcualia and connects the rib with the vertebral centrum.[TAO]") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0000708") Annotation( "AAO"^^xsd:string) Annotation( "AAO:Duellman_and_Trueb_1994"^^xsd:string) "Paired processes, which arise near the dorsolateral part of the vertebral centrum, for the attachment of the capitulum of two-headed ribs.[AAO]") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0000698") Annotation( "AAO"^^xsd:string) Annotation( "AAO:Pugener_2002") Annotation( "AAO:Pugener_and_Maglia_2008") Annotation( "AAO:Trueb_1973") "Projections on each side of the vertebra from the point where the neural arch lamina joins the pedicel for the articulation with the head of a single-headed rib or the upper head of a double-headed rib. Also called diapophyses. They provide surfaces for the attachment of muscles. In anurans, the term transverse process is used in reference to the processes associated with the presacral and postsacral vertebrae.[AAO]") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0001362") Annotation( "TAO"^^xsd:string) "relationship loss: develops_from basiventral (TAO:0001361)[TAO]") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0001362") Annotation( "TAO"^^xsd:string) "relationship loss: part_of non-Weberian precaudal vertebra (TAO:0001582)[TAO]") AnnotationAssertion( "AAO:0000708") AnnotationAssertion( "TAO:0001362") AnnotationAssertion( "ZFA:0001362") AnnotationAssertion(Annotation( "ZFA:0001362") "lateral process of basiventral") AnnotationAssertion(Annotation( "TAO:0001362") Annotation( ) "parapophyses") AnnotationAssertion(Annotation( "TAO:0001362") Annotation( ) "transverse apophyses") AnnotationAssertion(Annotation( "TAO:0001362") "transverse apophysis") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003109") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "parapophysis") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (otic region) AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0000189") Annotation( "TAO"^^xsd:string) Annotation( "TAO:MAH") "Anatomical cluster that is a posterolateral part of the cranium and structurally supports the vestibuloauditory system.[TAO]") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0010208") Annotation( "AAO"^^xsd:string) Annotation( "AAO:EJS"^^xsd:string) "Anatomical cluster that is a posterolateral part of the neurocranium and structurally supports the vestibuloauditory system.[AAO]") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0000189") Annotation( "TAO"^^xsd:string) "relationship loss: overlaps hyomandibular-otic region joint (TAO:0001947)[TAO]") AnnotationAssertion( "UBERONREF:0000007 has this as a syn for otic capsule") AnnotationAssertion( "AAO:0010208") AnnotationAssertion( "TAO:0000189") AnnotationAssertion( "XAO:0003175") AnnotationAssertion( "ZFA:0000189") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "ZFA:0000189") "cranial vault") AnnotationAssertion( "UBERON:0003110") AnnotationAssertion(rdfs:label "otic region") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (sphenoid region) AnnotationAssertion(Annotation( "TAO:0000290") Annotation( "UBERONREF:0000007") "Anatomical cluster that forms the floor and sidewalls of the middle part of the cranium.") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0010207") Annotation( "AAO"^^xsd:string) Annotation( "AAO:EJS"^^xsd:string) "Anatomical cluster that forms the floor and sidewalls of the middle part of the neurocranium.[AAO]") AnnotationAssertion( "AAO:0010207") AnnotationAssertion( "TAO:0000290") AnnotationAssertion( "XAO:0003174") AnnotationAssertion( "ZFA:0000290") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003111") AnnotationAssertion(rdfs:label "sphenoid region") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (olfactory region) AnnotationAssertion(Annotation( "TAO:0000351") "Anatomical cluster that is located in the anterior region of the cranium and provides structural support for the olfactory organ.") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0000351") Annotation( "TAO"^^xsd:string) Annotation( "TAO:MAH") "Anatomical cluster that is located in the anterior region of the cranium and provides structural support for the peripheral olfactory organ.[TAO]") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0010206") Annotation( "AAO"^^xsd:string) Annotation( "AAO:EJS"^^xsd:string) "Anatomical cluster that is located in the anterior region of the neurocranium and provides structural support for the olfactory organs.[AAO]") AnnotationAssertion( "AAO:0010206") AnnotationAssertion( "EFO:0003525") AnnotationAssertion( "NCIT:C98765") AnnotationAssertion( "TAO:0000351") AnnotationAssertion( "XAO:0003172") AnnotationAssertion( "ZFA:0000351") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "ZFA:0000351") "ethmoid region") AnnotationAssertion( "UBERON:0003112") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "olfactory region") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (dermatocranium) AnnotationAssertion(Annotation( ) Annotation( "ZFA:0000863") "Subdivision of skeleton that includes all dermal bones in the cranial skeleton[ZFA,modified].") AnnotationAssertion( "wikipedia treats skull roof and dermatocranium as synonymous, but some sources treat the roof as being part of the dermatocranium - see UBERONREF:0000007") AnnotationAssertion(Annotation( "ISBN:0073040584"^^xsd:string) ) AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0000863") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "Anatomical cluster that is part of the cranium and composed of dermally derived bones.[TAO]") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0010154") Annotation( "AAO"^^xsd:string) Annotation( "AAO:BJB"^^xsd:string) "Anatomical cluster that is part of the cranium which consists of dermally derived bones.[AAO]") AnnotationAssertion( ) AnnotationAssertion( "AAO:0010154") AnnotationAssertion( "TAO:0000863") AnnotationAssertion( "VHOG:0001665") AnnotationAssertion( "XAO:0003169") AnnotationAssertion( "ZFA:0000863") AnnotationAssertion(Annotation( "TAO:0000863") "dendrocranium") AnnotationAssertion(Annotation( "UBERONREF:0000007") "exocranium") AnnotationAssertion(Annotation( ) Annotation( ) "dermal skull roof") AnnotationAssertion( "dermatocranial cover") AnnotationAssertion(Annotation( ) "roof of skull") AnnotationAssertion(Annotation( ) Annotation( ) "skull roof") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "ZFA:0000863") "dermal bone cranium") AnnotationAssertion( "dermal part of skull") AnnotationAssertion( "dermal skull bones") AnnotationAssertion(Annotation( ) "roofing bones of the skull") AnnotationAssertion( "skull exoskeleton") AnnotationAssertion( "UBERON:0003113") AnnotationAssertion(rdfs:label "dermatocranium") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pharyngeal arch 3) AnnotationAssertion(Annotation( "MP:0006339") "The third branchial arch contributes to the development of the hyoid bone, stylopharyngeus muscle, inferior parathyroid gland, and thymus.") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0010365") Annotation( "AAO"^^xsd:string) Annotation( "ISBN:0-02-377110-0") "The most anterior, or first, pharygeal/branchial arch, composed of the mandibular process, forming the posterior border of the stomodeum, and the maxillary process anterior to the stomodeum, contains the first aortic arch.[AAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000298") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "DOI:10.1111/j.1469-7580.2005.00472.x Graham A, Okabe M and Quinlan R, The role of the endoderm in the development and evolution of the pharyngeal arches. J Anat (2005)") "A conserved feature of all vertebrate embryos is the presence of a series of bulges on the lateral surface of the head, the pharyngeal arches; it is within these structures that the nerves, muscles and skeletal components of the pharyngeal apparatus are laid down. The pharyngeal arches are separated by endodermal outpocketings, the pharyngeal pouches.[well established][VHOG]") AnnotationAssertion(Annotation( "XAO"^^xsd:string) "in XAO, called branchial arch 1 and df VP3") AnnotationAssertion( "3"^^xsd:nonNegativeInteger) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010365") AnnotationAssertion( "EHDAA2:0000069") AnnotationAssertion( "EHDAA:1080") AnnotationAssertion( "EMAPA:16399") AnnotationAssertion( "FMA:293029") AnnotationAssertion( "TAO:0001598") AnnotationAssertion( "VHOG:0000298") AnnotationAssertion( "XAO:0000447") AnnotationAssertion( "ZFA:0001606") AnnotationAssertion( "3rd pharyngeal arch") AnnotationAssertion(Annotation( "ZFA:0001606") Annotation( ) "first gill arch") AnnotationAssertion(Annotation( "ZFA:0001606") Annotation( ) "gill arch 1") AnnotationAssertion( "third pharyngeal arch") AnnotationAssertion( "third visceral arch") AnnotationAssertion( "visceral arch 3") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "EHDAA2:0000069") "3rd arch") AnnotationAssertion(Annotation( "VHOG:0000298") "3rd visceral arch") AnnotationAssertion(Annotation( "AAO:0010365") Annotation( "ZFA:0001606") Annotation( ) "branchial arch 1") AnnotationAssertion(Annotation( "ZFA:0001606") Annotation( ) "first branchial arch") AnnotationAssertion( "UBERON:0003114") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "pharyngeal arch 3") SubClassOf( ) # Class: (pharyngeal arch 4) AnnotationAssertion(Annotation( "MP:0006340") "Contributes to development of the cartilage of the larynx, laryngeal, pharyngeal, and soft palate muscles, superior parathyroid gland, and C-cells of the thymus.") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0010366") Annotation( "AAO"^^xsd:string) Annotation( "ISBN:0-02-377110-0") "The second pharyngeal/branchial arch; arises as a thickening of the pharygeal wall between the first and second branchial clefts; contains the second aortic arch; forms part of the hyoid bone, tongue and facial musculature.[AAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000299") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "DOI:10.1111/j.1469-7580.2005.00472.x Graham A, Okabe M and Quinlan R, The role of the endoderm in the development and evolution of the pharyngeal arches. J Anat (2005)") "A conserved feature of all vertebrate embryos is the presence of a series of bulges on the lateral surface of the head, the pharyngeal arches; it is within these structures that the nerves, muscles and skeletal components of the pharyngeal apparatus are laid down. The pharyngeal arches are separated by endodermal outpocketings, the pharyngeal pouches.[well established][VHOG]") AnnotationAssertion(Annotation( "XAO"^^xsd:string) "in XAO, called branchial arch 2 and df VP4") AnnotationAssertion( "4"^^xsd:nonNegativeInteger) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010366") AnnotationAssertion( "EHDAA2:0000086") AnnotationAssertion( "EHDAA:1663") AnnotationAssertion( "EMAPA:16760") AnnotationAssertion( "FMA:293035") AnnotationAssertion( "TAO:0001599") AnnotationAssertion( "VHOG:0000299") AnnotationAssertion( "XAO:0000449") AnnotationAssertion( "ZFA:0001607") AnnotationAssertion(Annotation( ) "4th branchial arch") AnnotationAssertion( "4th pharyngeal arch") AnnotationAssertion( "4th visceral arch") AnnotationAssertion( "fourth pharyngeal arch") AnnotationAssertion(Annotation( "ZFA:0001607") Annotation( ) "gill arch 2") AnnotationAssertion(Annotation( "ZFA:0001607") Annotation( ) "second gill arch") AnnotationAssertion( "visceral arch 4") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "EHDAA2:0000086") "4th arch") AnnotationAssertion(Annotation( "AAO:0010366") Annotation( "ZFA:0001607") Annotation( ) "branchial arch 2") AnnotationAssertion(Annotation( "VHOG:0000299") "fourth visceral arch") AnnotationAssertion(Annotation( "ZFA:0001607") Annotation( ) "second branchial arch") AnnotationAssertion( "UBERON:0003115") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "pharyngeal arch 4") SubClassOf( ) # Class: (pharyngeal arch 5) AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0010367") Annotation( "AAO"^^xsd:string) Annotation( "ISBN:0-02-377110-0") "The third in a series of paired bars in the wall of the pharynx, within which are formed the third aortic arch and the cartilage bar of the visceral skeleton, forms and supports the gills.[AAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001204") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "DOI:10.1111/j.1469-7580.2005.00472.x Graham A, Okabe M, Quinlan R, The role of the endoderm in the development and evolution of the pharyngeal arches. J Anat (2005)") "A conserved feature of all vertebrate embryos is the presence of a series of bulges on the lateral surface of the head, the pharyngeal arches; it is within these structures that the nerves, muscles and skeletal components of the pharyngeal apparatus are laid down. The pharyngeal arches are separated by endodermal outpocketings, the pharyngeal pouches.[well established][VHOG]") AnnotationAssertion( "A fifth arch never establishes itself in amniotes") AnnotationAssertion(Annotation( "XAO"^^xsd:string) "in XAO, called branchial arch 3 and df VP5") AnnotationAssertion( "5"^^xsd:nonNegativeInteger) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010367") AnnotationAssertion( "FMA:293045") AnnotationAssertion( "TAO:0001600") AnnotationAssertion( "VHOG:0001204") AnnotationAssertion( "XAO:0000451") AnnotationAssertion( "ZFA:0001608") AnnotationAssertion(Annotation( "XAO:0000451") "fifth visceral arch") AnnotationAssertion(Annotation( "ZFA:0001608") "gill arch 3") AnnotationAssertion(Annotation( "ZFA:0001608") "visceral arch 5") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "VHOG:0001204") "5th pharyngeal arch") AnnotationAssertion(Annotation( "VHOG:0001204") "5th visceral arch") AnnotationAssertion(Annotation( "AAO:0010367") Annotation( "XAO:0000451") Annotation( ) "branchial arch 3") AnnotationAssertion(Annotation( "ZFA:0001608") "branchial arch 3") AnnotationAssertion(Annotation( "VHOG:0001204") "fifth pharyngeal arch") AnnotationAssertion(Annotation( "XAO:0000451") Annotation( ) "third branchial arch") AnnotationAssertion( "UBERON:0003116") AnnotationAssertion(rdfs:label "pharyngeal arch 5") SubClassOf( ) # Class: (pharyngeal arch 6) AnnotationAssertion(Annotation( "MP:0006347") "The 6th pharyngeal arch. contributes to the development of the sternocleidomastoid and trapezius muscles.") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0010368") Annotation( "AAO"^^xsd:string) Annotation( "ISBN:0-02-377110-0") "The forth in a series of paired bars in the wall of the pharynx, within which are formed the forth aortic arch and the cartilage bar of the visceral skeleton, forms and supports the gills.[AAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001205") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "DOI:10.1111/j.1469-7580.2005.00472.x Graham A, Okabe M, Quinlan R, The role of the endoderm in the development and evolution of the pharyngeal arches. J Anat (2005)") "A conserved feature of all vertebrate embryos is the presence of a series of bulges on the lateral surface of the head, the pharyngeal arches; it is within these structures that the nerves, muscles and skeletal components of the pharyngeal apparatus are laid down. The pharyngeal arches are separated by endodermal outpocketings, the pharyngeal pouches.[well established][VHOG]") AnnotationAssertion( "6"^^xsd:nonNegativeInteger) AnnotationAssertion( "UBERON:0004349") AnnotationAssertion( ) AnnotationAssertion( "AAO:0010368") AnnotationAssertion( "EHDAA2:0004075") AnnotationAssertion( "EMAPA:32766") AnnotationAssertion( "FMA:293047") AnnotationAssertion( "TAO:0001601") AnnotationAssertion( "VHOG:0001205") AnnotationAssertion( "XAO:0000453") AnnotationAssertion( "ZFA:0001609") AnnotationAssertion(Annotation( "EHDAA2:0004075") "6th arch") AnnotationAssertion(Annotation( "ZFA:0001609") "gill arch 4") AnnotationAssertion( "sixth branchial arch") AnnotationAssertion(Annotation( "ZFA:0001609") "visceral arch 6") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "VHOG:0001205") "6th pharyngeal arch") AnnotationAssertion(Annotation( "VHOG:0001205") "6th visceral arch") AnnotationAssertion(Annotation( "AAO:0010368") Annotation( "ZFA:0001609") Annotation( ) "branchial arch 4") AnnotationAssertion(Annotation( ) "fourth branchial arch") AnnotationAssertion(Annotation( "VHOG:0001205") "sixth pharyngeal arch") AnnotationAssertion(Annotation( "XAO:0000453") "sixth visceral arch") AnnotationAssertion( "UBERON:0003117") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "pharyngeal arch 6") SubClassOf( ) # Class: (pharyngeal arch artery 1) AnnotationAssertion(Annotation( "MP:0010355") "The vessels formed within the first pair of branchial arches in embryogenesis.") AnnotationAssertion( "Disappears early in development in tetrapods") AnnotationAssertion(Annotation( "ZFA"^^xsd:string) "ZFA states that The paired aortic arch 1 arteries branch off of the ventral aorta, and empty into the right and left lateral dorsal aortas") AnnotationAssertion( "UBERON:0004371") AnnotationAssertion( ) AnnotationAssertion( "AAO:0010415") AnnotationAssertion( "EHDAA2:0000007") AnnotationAssertion( "EMAPA:16202") AnnotationAssertion( "EMAPA:16685") AnnotationAssertion( "TAO:0005005") AnnotationAssertion( "VHOG:0000149") AnnotationAssertion( "XAO:0000342") AnnotationAssertion( "ZFA:0005005") AnnotationAssertion(Annotation( "EMAPA:16685") "1st arch artery") AnnotationAssertion(Annotation( "ZFA:0005005") "AA1") AnnotationAssertion(Annotation( "ZFA:0005005") "aortic arch 1") AnnotationAssertion(Annotation( "XAO:0000342") "first aortic arch") AnnotationAssertion( "first branchial arch artery") AnnotationAssertion(Annotation( "ZFA:0005005") "mandibular aortic arch") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "EMAPA:16685") "1st aortic arch artery") AnnotationAssertion(Annotation( "EMAPA:16685") "1st branchial arch artery") AnnotationAssertion(Annotation( "EMAPA:16685") "1st pharyngeal arch artery") AnnotationAssertion(Annotation( "EMAPA:16685") "first arch artery") AnnotationAssertion( "UBERON:0003118") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "pharyngeal arch artery 1") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pharyngeal arch artery 2) AnnotationAssertion(Annotation( "MP:0010356") "The vessels formed within the second pair of branchial arches in embryogenesis.") AnnotationAssertion(Annotation( ) "The first and second arches disappear early, but the dorsal end of the second gives origin to the stapedial artery, a vessel which atrophies in humans but persists in some mammals. It passes through the ring of the stapes and divides into supraorbital, infraorbital, and mandibular branches which follow the three divisions of the trigeminal nerve. The infraorbital and mandibular arise from a common stem, the terminal part of which anastomoses with the external carotid. On the obliteration of the stapedial artery this anastomosis enlarges and forms the internal maxillary artery, and the branches of the stapedial artery are now branches of this vessel. The common stem of the infraorbital and mandibular branches passes between the two roots of the auriculotemporal nerve and becomes the middle meningeal artery; the original supraorbital branch of the stapedial is represented by the orbital twigs of the middle meningeal[WP][Wikipedia:Aortic_arches#Arches_1_and_2].") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0010418") Annotation( "AAO"^^xsd:string) Annotation( "ISBN:0-02-377110-0") "The second in a series paired arterial connections between the dorsal and ventral aortae. Aortic arch 2 that is part of hyoid arch.[AAO]") AnnotationAssertion( "UBERON:0004372") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010418") AnnotationAssertion( "EHDAA2:0000051") AnnotationAssertion( "EMAPA:16203") AnnotationAssertion( "EMAPA:16686") AnnotationAssertion( "TAO:0005006") AnnotationAssertion( "VHOG:0000148") AnnotationAssertion( "XAO:0000343") AnnotationAssertion( "ZFA:0005006") AnnotationAssertion(Annotation( "EHDAA2:0000051") "2nd arch artery") AnnotationAssertion(Annotation( "ZFA:0005006") "AA2") AnnotationAssertion(Annotation( "ZFA:0005006") "aortic arch 2") AnnotationAssertion(Annotation( "ZFA:0005006") "hyoid aortic arch") AnnotationAssertion(Annotation( "XAO:0000343") "second aortic arch") AnnotationAssertion( "second branchial arch artery") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "EMAPA:16686") "2nd aortic arch artery") AnnotationAssertion(Annotation( "EMAPA:16686") "2nd branchial arch artery") AnnotationAssertion(Annotation( "EMAPA:16686") "2nd pharyngeal arch artery") AnnotationAssertion( "UBERON:0003119") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "pharyngeal arch artery 2") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pharyngeal arch artery 3) AnnotationAssertion(Annotation( "MP:0006356") "The vessels formed within the third pair of branchial arches in embryogenesis.") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0005007") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "Aortic arches 3 and 4 are not remodeled but are retained largely intact as the branchial arteries providing circulation through the gills. These areches are direct branches from the ventral aorta to the lateral dorsal aorta. Isogai et al. 2001.[TAO]") AnnotationAssertion(Annotation( ) "The third aortic arch constitutes the commencement of the internal carotid artery, and is therefore named the carotid arch[WP][Wikipedia:Aortic_arches#Arch_3].") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0010419") Annotation( "AAO"^^xsd:string) Annotation( "ISBN:0-02-377110-0") "The third in a series paired arterial connections between the dorsal and ventral aortae. Aortic arch 3 lies within the 3rd branchial arch and branches directly from the ventral aorta to the lateral dorsal aorta, and are retained as the branchial arteries providing circulation through the gills in the adult.[AAO]") AnnotationAssertion( "UBERON:0004352") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010419") AnnotationAssertion( "EHDAA2:0000070") AnnotationAssertion( "EMAPA:16687") AnnotationAssertion( "TAO:0005007") AnnotationAssertion( "VHOG:0000147") AnnotationAssertion( "XAO:0000344") AnnotationAssertion( "ZFA:0005007") AnnotationAssertion(Annotation( "EHDAA2:0000070") "3rd arch artery") AnnotationAssertion(Annotation( "ZFA:0005007") "AA3") AnnotationAssertion(Annotation( "ZFA:0005007") "aortic arch 3") AnnotationAssertion(Annotation( ) "carotid arch") AnnotationAssertion(Annotation( "XAO:0000344") "third aortic arch") AnnotationAssertion( "third branchial arch artery") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "EMAPA:16687") "3rd aortic arch artery") AnnotationAssertion(Annotation( "EMAPA:16687") "3rd branchial arch artery") AnnotationAssertion(Annotation( "EMAPA:16687") "3rd pharyngeal arch artery") AnnotationAssertion( "UBERON:0003120") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "pharyngeal arch artery 3") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pharyngeal arch artery 4) AnnotationAssertion(Annotation( "MP:0006354") "The vessels formed within the fourth pair of branchial arches in embryogenesis.") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0005008") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "Aortic arches 3 and 4 are not remodeled but are retained largely intact as the branchial arteries providing circulation through the gills. These areches are direct branches from the ventral aorta to the lateral dorsal aorta. Isogai et al. 2001.[TAO]") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0010420") Annotation( "AAO"^^xsd:string) Annotation( "ISBN:0-02-377110-0") "The forth in a series paired arterial connections between the dorsal and ventral aortae, lies within the 4th branchial arch. The paired aortic arch 4 arteries branch directly from the ventral aorta to the lateral dorsal aorta, and are retained as the branchial arteries providing circulation through the gills in the adult.[AAO]") AnnotationAssertion(Annotation( ) "The fourth right arch forms the right subclavian as far as the origin of its internal mammary branch; while the fourth left arch constitutes the arch of the aorta between the origin of the left carotid artery and the termination of the ductus arteriosus[WP][Wikipedia:Aortic_arches#Arch_4].") AnnotationAssertion( "Normally, the left fourth arch becomes the aortic arch, the right fourth arch contributes to the innominate artery[http://emedicine.medscape.com/article/899609-overview] in birds it is the right fourth arch which forms the permanent aorta") AnnotationAssertion( "UBERON:0004350") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010420") AnnotationAssertion( "EHDAA2:0000087") AnnotationAssertion( "EMAPA:17004") AnnotationAssertion( "TAO:0005008") AnnotationAssertion( "XAO:0000355") AnnotationAssertion( "ZFA:0005008") AnnotationAssertion(Annotation( "EHDAA2:0000087") "4th arch artery") AnnotationAssertion(Annotation( "ZFA:0005008") "AA4") AnnotationAssertion(Annotation( "ZFA:0005008") "aortic arch 4") AnnotationAssertion(Annotation( "XAO:0000355") "fourth aortic arch") AnnotationAssertion( "fourth branchial arch artery") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "EMAPA:17004") "4th aortic arch artery") AnnotationAssertion(Annotation( "EMAPA:17004") "4th branchial arch artery") AnnotationAssertion(Annotation( "EMAPA:17004") "4th pharyngeal arch artery") AnnotationAssertion(Annotation( "ISBN:0073040584"^^xsd:string) Annotation( "XAO:0000355") "systemic arch") AnnotationAssertion( "UBERON:0003121") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "proximal right subclavian") AnnotationAssertion(rdfs:label "pharyngeal arch artery 4") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pharyngeal arch artery 5) AnnotationAssertion(Annotation( ) "The vessels formed within the fifth pair of pharyngeal arches in embryogenesis.") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0005009") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "The fifth and sixth arches, which come on-line at approximately 2.5 dpf, have a common trunk from the ventral aorta and drain to the midline dorsal aorta via an independent route. The fifth and sixth aortic arches supply the trunk and tail with oxigenated blood. Isogai et al. 2001.[TAO]") AnnotationAssertion(Annotation( ) "The fifth arch disappears on both sides[WP][Wikipedia:Aortic_arches#Arch_5].") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0010421") Annotation( "AAO"^^xsd:string) Annotation( "ISBN:0-02-377110-0") "The fifth in a series paired arterial connections between the dorsal and ventral aortae. Aortic arch 5 artery is paired and has a common trunk with aortic arch 6 from the ventral aorta, and drains via a separate branch of the lateral dorsal aorta. Aortic arches 5 and 6 supply the trunk and tail with oxygenated blood.[AAO]") AnnotationAssertion( "In humans the 5th arch disappears on both sides") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010421") AnnotationAssertion( "TAO:0005009") AnnotationAssertion( "VHOG:0000145") AnnotationAssertion( "XAO:0000352") AnnotationAssertion( "ZFA:0005009") AnnotationAssertion(Annotation( "ZFA:0005009") "AA5") AnnotationAssertion(Annotation( "ZFA:0005009") "aortic arch 5") AnnotationAssertion(Annotation( "XAO:0000352") "fifth aortic arch") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003122") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "pharyngeal arch artery 5") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pharyngeal arch artery 6) AnnotationAssertion(Annotation( "MP:0006355") "The vessels formed within the sixth pair of branchial arches in embryogenesis.") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0005016") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "The fifth and sixth arches, which come on-line at approximately 2.5 dpf, have a common trunk from the ventral aorta and drain to the midline dorsal aorta via an independent route. The fifth and sixth aortic arches supply the trunk and tail with oxigenated blood. Isogai et al. 2001.[TAO]") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0010422") Annotation( "AAO"^^xsd:string) Annotation( "ISBN:0-02-377110-0") "The sixth in a series paired arterial connections between the dorsal and ventral aortae. Aortic arch 6 artery is paired and has a common trunk with aortic arch 5 from the ventral aorta, and drains via a separate branch of the lateral dorsal aorta. It forms part of the pulmonary arteries, and in the later embryo, the ductus arteriosis. Aortic arches 5 and 6 together supply the trunk and tail with oxygenated blood.[AAO]") AnnotationAssertion(Annotation( ) "The sixth right arch disappears; the sixth left arch gives off the pulmonary arteries and forms the ductus arteriosus; this duct remains pervious during the whole of fetal life, but then closes within the first few days after birth due to increased O2 concentration. Oxygen concentration causes the production of bradykinin which causes the ductus to constrict occluding all flow. Within 1-3 months, the ductus is obliterated and becomes the ligamentum arteriosus. His showed that in the early embryo the right and left arches each gives a branch to the lungs, but that later both pulmonary arteries take origin from the left arch[WP][Wikipedia:Aortic_arches#Arch_6].") AnnotationAssertion(Annotation( ) "the distal left sixth arch becomes the ductus arteriosus, the proximal sixth arches bilaterally contribute to the proximal branch pulmonary arteries") AnnotationAssertion( "UBERON:0004351") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010422") AnnotationAssertion( "EHDAA2:0000102") AnnotationAssertion( "EMAPA:17005") AnnotationAssertion( "TAO:0005016") AnnotationAssertion( "VHOG:0000144") AnnotationAssertion( "XAO:0000353") AnnotationAssertion( "ZFA:0005016") AnnotationAssertion(Annotation( "EMAPA:17005") "6th arch artery") AnnotationAssertion(Annotation( "ZFA:0005016") "AA6") AnnotationAssertion(Annotation( "ZFA:0005016") "aortic arch 6") AnnotationAssertion(Annotation( "XAO:0000353") "sixth aortic arch") AnnotationAssertion( "sixth branchial arch artery") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "EMAPA:17005") "6th aortic arch artery") AnnotationAssertion(Annotation( "EMAPA:17005") "6th branchial arch artery") AnnotationAssertion(Annotation( "EMAPA:17005") "6th pharyngeal arch artery") AnnotationAssertion(Annotation( "ISBN:0073040584"^^xsd:string) "pulmonary arch") AnnotationAssertion( "UBERON:0003123") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "pharyngeal arch artery 6") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (chorion membrane) AnnotationAssertion(Annotation( "MESH:A10.615.284.473") Annotation( "MP:0002836") "The outermost extraembryonic membrane.") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000200") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( ) "The outer membrane enclosing the embryo in reptiles, birds, and mammals. [TFD][VHOG]") AnnotationAssertion(Annotation( "BTO:0000252") "The outer membrane of the two membranes enclosing the embryo in reptiles, birds, and mammals. In placental mammals it contributes to the development of the placenta[BTO:0000252].") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000200") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0072528305 Kardong KV, Vertebrates: Comparative Anatomy, Function, Evolution (2006) p.187") "Structures homologous to the four extraembryonic membranes of reptiles and birds appear in mammals: amnion, chorion, yolk sac, and allantois.[well established][VHOG]") AnnotationAssertion( "chorionic") AnnotationAssertion( "The chorion of placentals is bilaminar as in reptiles and birds, but forms from the trophoblast and includes the ajdacent mesodermal layer [ISBN:0073040584]") AnnotationAssertion(Annotation( ) "Extra-embryonic ectoderm") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0000252") AnnotationAssertion( "CALOHA:TS-0144") AnnotationAssertion( "EFO:0002780") AnnotationAssertion( "EHDAA2:0000245") AnnotationAssertion( "EHDAA:150") AnnotationAssertion( "EMAPA:16112") AnnotationAssertion( "EV:0100121") AnnotationAssertion( "FMA:80224") AnnotationAssertion( "GAID:1299") AnnotationAssertion( "MESH:A16.254.403.473") AnnotationAssertion( "NCIT:C34122") AnnotationAssertion( "NCIT:C34124") AnnotationAssertion(Annotation( "ncithesaurus:Chorion") "UMLS:C0008503") AnnotationAssertion(Annotation( "ncithesaurus:Chorionic_Sac") "UMLS:C1516505") AnnotationAssertion( "VHOG:0000200") AnnotationAssertion( "chorion") AnnotationAssertion( "chorion (vertebrates)") AnnotationAssertion( "embryonic chorion") AnnotationAssertion( "fetal chorion") AnnotationAssertion(Annotation( ) Annotation( "ZFIN:curator"^^xsd:string) "uterine chorion") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "chorion frondosum") AnnotationAssertion(Annotation( ) "chorionic sac") AnnotationAssertion( "UBERON:0003124") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "chorion membrane") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/5/51/Gray24.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "ISBN:0073040584"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (vitelline membrane) AnnotationAssertion(Annotation( ) "A structure directly adjacent to the outer surface of the plasma membrane of an ovum. It is composed mostly of protein fibers, with protein receptors needed for sperm binding, binding to sperm plasma membrane receptors. The species-specificity between these receptors contributes to prevention of breeding between different species [Wikipedia]. A protective layer around the egg[FBbt].") AnnotationAssertion( "TODO - consider GO CC request. GO:0030704-vitelline membrane formation considered a subclass of CC organization") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0010332") Annotation( "AAO"^^xsd:string) Annotation( "AAO:EJS"^^xsd:string) "Thin membrane enclosing and immediately adjacent to the ovum. Produced in the ovary.[AAO]") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0010332") Annotation( "AAO"^^xsd:string) "relationship loss: part_of zygote (AAO:0010324)[AAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000720") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0072528305 Kardong KV, Vertebrates: Comparative Anatomy, Function, Evolution (2006) p.159") "Outside the plasma membrane, three envelopes surround the ovum. The first, the primary egg envelope, lies between the plasma membrane and the surrounding cells of the ovary. The most consistent component of this primary layer is the vitelline membrane, a transparent jacket of fibrous protein. In mammals, the homologous structure is called the zona pellucida.[well established][VHOG]") AnnotationAssertion(Annotation( "VHOG:0000720") "zona pellucida - vitelline membrane") AnnotationAssertion( ) AnnotationAssertion( "AAO:0010332") AnnotationAssertion( "BTO:0001450") AnnotationAssertion( "FBbt:00000042") AnnotationAssertion( "GAID:1318") AnnotationAssertion( "MESH:A16.631.886") AnnotationAssertion( "VHOG:0000720") AnnotationAssertion( "XAO:0000030") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "m. vitellina") AnnotationAssertion(Annotation( "BTO:0001450") "yolk sac membrane") AnnotationAssertion( "zona pellucida") AnnotationAssertion( "UBERON:0003125") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "vitelline membrane") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (trachea) AnnotationAssertion(Annotation( ) Annotation( "GO:0060438") "The trachea is the portion of the airway that attaches to the bronchi as it branches [GO:dph].") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0010140") Annotation( "AAO"^^xsd:string) Annotation( "AAO:BJB"^^xsd:string) "An elongated tube which carries air to and from the lungs.[AAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000371") Annotation( "VHOG"^^xsd:string) Annotation( ) "The respiratory tube between the larynx and the bronchi. [Bemis_WE, Functional_Anatomy_of_the_Vertebrates:_An_Evolutionary_Perspective, Glossary_G-29, Grande_L, Liem_KF, Third_Edition_(2001)_Orlando_Fla.:_Harcourt_College_Publishers, Walker_WF][VHOG]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000371") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0072528305 Kardong KV, Vertebrates: Comparative Anatomy, Function, Evolution (2006) p.409") "In primitive fishes and most tetrapods, the lungs of adults are usually paired. They lie ventral to the digestive tract and are connected to the outside environment through the trachea.[well established][VHOG]") AnnotationAssertion( "tracheal") AnnotationAssertion( "In birds, the trachea runs from the pharynx to the syrinx, from which the primary bronchi diverge. Swans have an unusually elongated trachea, part of which is coiled beneath the sternum; this may act as a resonator to amplify sound. In some birds, the cartilagenous rings are complete, and may even be ossified. In amphibians, the trachea is normally extremely short, and leads directly into the lungs, without clear primary bronchi. A longer trachea is, however found in some long-necked salamanders, and in caecilians. While there are irregular cartilagenous nodules on the amphibian trachea, these do not form the rings found in amniotes. The only vertebrate to have lungs, but no trachea, is Polypterus, in which the lungs arise directly from the pharynx.") AnnotationAssertion(Annotation( "ISBN:0123813611"^^xsd:string) "in mouse 15-18 C-rings, 15-20 in human.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010140") AnnotationAssertion( "BTO:0001388") AnnotationAssertion( "CALOHA:TS-1060") AnnotationAssertion( "EFO:0000935") AnnotationAssertion( "EHDAA2:0002066") AnnotationAssertion( "EHDAA:3078") AnnotationAssertion( "EMAPA:16853") AnnotationAssertion( "EV:0100040") AnnotationAssertion( "FMA:7394") AnnotationAssertion( "GAID:361") AnnotationAssertion( "MA:0000441") AnnotationAssertion( "MAT:0000137") AnnotationAssertion( "MESH:D014132") AnnotationAssertion( "MIAA:0000137") AnnotationAssertion( "NCIT:C12428") AnnotationAssertion( "OpenCyc:Mx4rvViOX5wpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Trachea") "UMLS:C0040578") AnnotationAssertion( "VHOG:0000371") AnnotationAssertion( "XAO:0000118") AnnotationAssertion( "cartilaginous trachea") AnnotationAssertion(Annotation( ) "vertebrate trachea") AnnotationAssertion( "windpipe") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0001388") "tracheal tubule") AnnotationAssertion( "UBERON:0003126") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "trachea") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/9/9f/Illu_conducting_passages.svg"^^xsd:anyURI) AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/c/c3/Illu_conducting_passages.jpg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (cranium) AnnotationAssertion(Annotation( ) Annotation( ) "Upper portion of the skull that excludes the mandible (when present in the organism).") AnnotationAssertion( "cranial") AnnotationAssertion(Annotation( "FMA"^^xsd:string) "the inclusion of the FMA class here is probably not quite correct, as this class includes as parts sutures, whereas this is not part of the bones of the cranium") AnnotationAssertion(Annotation( "WP"^^xsd:string) "The term cranium can be ambiguous, in that it can refer to the neurocranium, or the neurocranium and the Facial skeleton") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0001328") AnnotationAssertion( "EFO:0000831") AnnotationAssertion( "EHDAA:6029") AnnotationAssertion( "EMAPA:17680") AnnotationAssertion( "FMA:71325") AnnotationAssertion( "MA:0000316") AnnotationAssertion( "MAT:0000340") AnnotationAssertion( "MIAA:0000340") AnnotationAssertion( "OpenCyc:Mx4rvVlEyJwpEbGdrcN5Y29ycA") AnnotationAssertion( "VHOG:0000334") AnnotationAssertion(Annotation( "FMA:71325") "bones of cranium") AnnotationAssertion(Annotation( "FMA:71325") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "ossa cranii") AnnotationAssertion(Annotation( "FMA:71325") "set of bones of cranium") AnnotationAssertion( "skull minus mandible") AnnotationAssertion( "upper part of skull") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0001328") "calvarium") AnnotationAssertion( "epicranial plate") AnnotationAssertion( "skeletal system of head") AnnotationAssertion( "UBERON:0003128") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "cranium") SubClassOf(Annotation( "FMA-inferred") ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (skull) AnnotationAssertion(Annotation( ) Annotation( ) Annotation( ) "Anatomical structure that is part of the head consisting entirely of cranium and mandible[WP].") AnnotationAssertion( ) AnnotationAssertion(Annotation( "FMA"^^xsd:string) "in FMA the skull is divided into orbit, neurocranium (8 parts), viscerocranium (26 parts). Here we have a separate overlapping division into cranium and mandible.") AnnotationAssertion( "in many ontologies, the structure called the cranium is inclusive of the mandible/lower jaw skeleton") AnnotationAssertion(Annotation( "WP"^^xsd:string) "A skull that is missing a mandible is only a cranium; this is the source of a very commonly made error in terminology. Those animals having skulls are called craniates") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0001295") AnnotationAssertion( "CALOHA:TS-2344") AnnotationAssertion( "EHDAA2:0000325") AnnotationAssertion( "EMAPA:17680") AnnotationAssertion( "FMA:46565") AnnotationAssertion( "GAID:82") AnnotationAssertion( "MESH:D012886") AnnotationAssertion( "NCIT:C12789") AnnotationAssertion( "OpenCyc:Mx4rvVjOsZwpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Skull") "UMLS:C0037303") AnnotationAssertion( "WikipediaCategory:Skull") AnnotationAssertion( "galen:Skull") AnnotationAssertion( "uberon") AnnotationAssertion( "cranial skeleton") AnnotationAssertion( "skeletal system of head") AnnotationAssertion( "UBERON:0003129") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "skull") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete arthropod hypopharynx) AnnotationAssertion( "FBbt:00005751") AnnotationAssertion( "HAO:0000409") AnnotationAssertion( "TGMA:0000090") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003132") AnnotationAssertion(rdfs:label "obsolete arthropod hypopharynx") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (reproductive organ) AnnotationAssertion(Annotation( "UBERON:xp") "An organ involved in reproduction.") AnnotationAssertion(Annotation( "GO") "GO uses genitalia for the singular organ") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:17381") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37731") AnnotationAssertion( "MA:0001752") AnnotationAssertion( "MESH:D005835") AnnotationAssertion( "NCIT:C25177") AnnotationAssertion( "OpenCyc:Mx4rwO39aJwpEbGdrcN5Y29ycA") AnnotationAssertion( "TGMA:0000591") AnnotationAssertion(Annotation( "ncithesaurus:Genitalia") "UMLS:C0017420") AnnotationAssertion( "WBbt:0008422") AnnotationAssertion( "genital organ") AnnotationAssertion( "reproductive system organ") AnnotationAssertion( "sex organ") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "genitalia") AnnotationAssertion( "UBERON:0003133") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "reproductive organ") SubClassOf( ) SubClassOf( ) # Class: (female reproductive organ) AnnotationAssertion(Annotation( "UBERON:xp") "A female organ involved in reproduction.") AnnotationAssertion( "EMAPA:28540") AnnotationAssertion( "MA:0000544") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "female organism reproductive organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "female organism reproductive structure") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "female organism reproductive system organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "female organism sex organ") AnnotationAssertion(Annotation( "MA:0000544") "female reproductive gland/organ") AnnotationAssertion( "female reproductive system organ") AnnotationAssertion( "female sex organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "reproductive organ of female organism") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "reproductive structure of female organism") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "reproductive system organ of female organism") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "sex organ of female organism") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003134") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "female reproductive organ") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (male reproductive organ) AnnotationAssertion(Annotation( "UBERON:xp") "A male organ involved in reproduction.") AnnotationAssertion( "MA:0000545") AnnotationAssertion( "WBbt:0008423") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "male organism reproductive organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "male organism reproductive structure") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "male organism reproductive system organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "male organism sex organ") AnnotationAssertion(Annotation( "MA:0000545") "male reproductive gland/organ") AnnotationAssertion( "male reproductive system organ") AnnotationAssertion( "male sex organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "reproductive organ of male organism") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "reproductive structure of male organism") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "reproductive system organ of male organism") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "sex organ of male organism") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "WBbt:0008423") "male genital") AnnotationAssertion( "UBERON:0003135") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "male reproductive organ") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete tagma) AnnotationAssertion( "FBbt:00000002") AnnotationAssertion( "HAO:0000988") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003136") AnnotationAssertion(rdfs:comment "arthropod specific groupings belong in separate ontology") AnnotationAssertion(rdfs:label "obsolete tagma") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete antennal segment) AnnotationAssertion( "FBbt:00000009") AnnotationAssertion( "HAO:0000104") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003137") AnnotationAssertion(rdfs:comment "arthropod specific groupings belong in separate ontology") AnnotationAssertion(rdfs:label "obsolete antennal segment") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete thoracic segment) AnnotationAssertion( "FBbt:00000016") AnnotationAssertion( "HAO:0001013") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003138") AnnotationAssertion(rdfs:comment "arthropod specific groupings belong in separate ontology") AnnotationAssertion(rdfs:label "obsolete thoracic segment") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete larval tagma) AnnotationAssertion( "FBbt:00001728") AnnotationAssertion( "HAO:0000462") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003139") AnnotationAssertion(rdfs:comment "arthropod specific groupings belong in separate ontology") AnnotationAssertion(rdfs:label "obsolete larval tagma") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete larval thorax) AnnotationAssertion( "FBbt:00001741") AnnotationAssertion( "HAO:0000463") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003140") AnnotationAssertion(rdfs:comment "arthropod specific groupings belong in separate ontology") AnnotationAssertion(rdfs:label "obsolete larval thorax") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete larval abdomen) AnnotationAssertion( "FBbt:00001746") AnnotationAssertion( "HAO:0000460") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003141") AnnotationAssertion(rdfs:label "obsolete larval abdomen") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete adult tagma) AnnotationAssertion( "FBbt:00003005") AnnotationAssertion( "HAO:0000089") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003144") AnnotationAssertion(rdfs:comment "arthropod specific groupings belong in separate ontology") AnnotationAssertion(rdfs:label "obsolete adult tagma") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete adult arthropod thorax) AnnotationAssertion( "FBbt:00003018") AnnotationAssertion( "HAO:0000090") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003145") AnnotationAssertion(rdfs:comment "arthropod specific groupings belong in separate ontology") AnnotationAssertion(rdfs:label "obsolete adult arthropod thorax") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete adult arthropod abdomen) AnnotationAssertion( "FBbt:00003023") AnnotationAssertion( "HAO:0000088") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003146") AnnotationAssertion(rdfs:label "obsolete adult arthropod abdomen") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete peritreme) AnnotationAssertion(Annotation( ) "That part of the integument of an insect which surrounds the spiracles.") AnnotationAssertion( "FBbt:00003121") AnnotationAssertion( "HAO:0000712") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FBbt:00003121") "rim") AnnotationAssertion( "UBERON:0003147") AnnotationAssertion(rdfs:comment "arthropod specific groupings belong in separate ontology. term also used for edge of the aperture of a univalve shell") AnnotationAssertion(rdfs:label "obsolete peritreme") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete sclerite) AnnotationAssertion(Annotation( ) "Hardened portions of arthropod exoskeletons.") AnnotationAssertion( "FBbt:00004475") AnnotationAssertion( "HAO:0000909") AnnotationAssertion( ) AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FBbt:00004475") "plate") AnnotationAssertion( "UBERON:0003148") AnnotationAssertion(rdfs:comment "arthropod specific groupings belong in separate ontology") AnnotationAssertion(rdfs:label "obsolete sclerite") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete tergite) AnnotationAssertion( "FBbt:00004476") AnnotationAssertion( "HAO:0001005") AnnotationAssertion(Annotation( "FBbt:00004476") "abdominal tergite") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003149") AnnotationAssertion(rdfs:comment "arthropod specific groupings belong in separate ontology") AnnotationAssertion(rdfs:label "obsolete tergite") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete sternite) AnnotationAssertion( "FBbt:00004477") AnnotationAssertion( "HAO:0000955") AnnotationAssertion(Annotation( "FBbt:00004477") "abdominal sternite") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003150") AnnotationAssertion(rdfs:comment "arthropod specific groupings belong in separate ontology") AnnotationAssertion(rdfs:label "obsolete sternite") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete foramen) AnnotationAssertion( "FBbt:00004478") AnnotationAssertion( "HAO:0000345") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003151") AnnotationAssertion(rdfs:comment "arthropod specific groupings belong in separate ontology") AnnotationAssertion(rdfs:label "obsolete foramen") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete phragma) AnnotationAssertion(Annotation( "HAO:0000716") "The lamella that serves as the site of attachment of the longitudinal flight muscle [HAO].") AnnotationAssertion( "FBbt:00004480") AnnotationAssertion( "HAO:0000716") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003152") AnnotationAssertion(rdfs:comment "arthropod specific groupings belong in separate ontology") AnnotationAssertion(rdfs:label "obsolete phragma") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete gena) AnnotationAssertion( "FBbt:00004491") AnnotationAssertion( "HAO:0000371") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FBbt:00004491") "cheek") AnnotationAssertion( "UBERON:0003154") AnnotationAssertion(rdfs:comment "arthropod specific groupings belong in separate ontology") AnnotationAssertion(rdfs:label "obsolete gena") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete postocciput) AnnotationAssertion( "FBbt:00004494") AnnotationAssertion( "HAO:0000790") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003156") AnnotationAssertion(rdfs:comment "arthropod specific groupings belong in separate ontology") AnnotationAssertion(rdfs:label "obsolete postocciput") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete postgena) AnnotationAssertion( "FBbt:00004496") AnnotationAssertion( "HAO:0000776") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003157") AnnotationAssertion(rdfs:comment "arthropod specific groupings belong in separate ontology") AnnotationAssertion(rdfs:label "obsolete postgena") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete tentorial pit) AnnotationAssertion( "FBbt:00004501") AnnotationAssertion( "HAO:0000999") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003158") AnnotationAssertion(rdfs:comment "arthropod specific groupings belong in separate ontology") AnnotationAssertion(rdfs:label "obsolete tentorial pit") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete anterior tentorial pit) AnnotationAssertion( "FBbt:00004502") AnnotationAssertion( "HAO:0000126") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003159") AnnotationAssertion(rdfs:comment "arthropod specific groupings belong in separate ontology") AnnotationAssertion(rdfs:label "obsolete anterior tentorial pit") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete posterior tentorial pit) AnnotationAssertion( "FBbt:00004503") AnnotationAssertion( "HAO:0000768") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003160") AnnotationAssertion(rdfs:comment "arthropod specific groupings belong in separate ontology") AnnotationAssertion(rdfs:label "obsolete posterior tentorial pit") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete mouthpart) AnnotationAssertion( "TODO") AnnotationAssertion( "FBbt:00004520") AnnotationAssertion( "HAO:0000639") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003163") AnnotationAssertion(rdfs:label "obsolete mouthpart") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete clypeus) AnnotationAssertion( "FBbt:00004521") AnnotationAssertion( "HAO:0000212") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003164") AnnotationAssertion(rdfs:comment "arthropod specific groupings belong in separate ontology") AnnotationAssertion(rdfs:label "obsolete clypeus") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete cibarium) AnnotationAssertion( "FBbt:00004526") AnnotationAssertion( "HAO:0000201") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FBbt:00004526") "atrium") AnnotationAssertion( "UBERON:0003165") AnnotationAssertion(rdfs:comment "arthropod specific groupings belong in separate ontology") AnnotationAssertion(rdfs:label "obsolete cibarium") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete prementum) AnnotationAssertion( "FBbt:00004534") AnnotationAssertion( "HAO:0000804") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FBbt:00004534") "theca") AnnotationAssertion( "UBERON:0003166") AnnotationAssertion(rdfs:comment "arthropod specific groupings belong in separate ontology") AnnotationAssertion(rdfs:label "obsolete prementum") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete lacinia) AnnotationAssertion( "FBbt:00004536") AnnotationAssertion( "HAO:0000457") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003167") AnnotationAssertion(rdfs:comment "arthropod specific groupings belong in separate ontology") AnnotationAssertion(rdfs:label "obsolete lacinia") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete mentum) AnnotationAssertion( "FBbt:00004544") AnnotationAssertion( "HAO:0000534") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003168") AnnotationAssertion(rdfs:comment "arthropod specific groupings belong in separate ontology") AnnotationAssertion(rdfs:label "obsolete mentum") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete cervical sclerite) AnnotationAssertion( "FBbt:00004548") AnnotationAssertion( "HAO:0000195") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003169") AnnotationAssertion(rdfs:comment "arthropod specific groupings belong in separate ontology") AnnotationAssertion(rdfs:label "obsolete cervical sclerite") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete tergum) AnnotationAssertion( "FBbt:00004552") AnnotationAssertion( "HAO:0001006") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003170") AnnotationAssertion(rdfs:comment "arthropod specific groupings belong in separate ontology") AnnotationAssertion(rdfs:label "obsolete tergum") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete episternum) AnnotationAssertion( "FBbt:00004554") AnnotationAssertion( "HAO:0000303") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003171") AnnotationAssertion(rdfs:comment "arthropod specific groupings belong in separate ontology") AnnotationAssertion(rdfs:label "obsolete episternum") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete epimeron) AnnotationAssertion( "FBbt:00004556") AnnotationAssertion( "HAO:0000299") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003172") AnnotationAssertion(rdfs:comment "arthropod specific groupings belong in separate ontology") AnnotationAssertion(rdfs:label "obsolete epimeron") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete pronotum) AnnotationAssertion( "FBbt:00004561") AnnotationAssertion( "HAO:0000853") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003173") AnnotationAssertion(rdfs:comment "arthropod specific groupings belong in separate ontology") AnnotationAssertion(rdfs:label "obsolete pronotum") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete furcasternum) AnnotationAssertion( "FBbt:00004570") AnnotationAssertion( "HAO:0000367") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003174") AnnotationAssertion(rdfs:comment "arthropod specific groupings belong in separate ontology") AnnotationAssertion(rdfs:label "obsolete furcasternum") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete prescutum) AnnotationAssertion( "FBbt:00004582") AnnotationAssertion( "HAO:0000815") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003175") AnnotationAssertion(rdfs:comment "arthropod specific groupings belong in separate ontology") AnnotationAssertion(rdfs:label "obsolete prescutum") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete anterior notal wing process) AnnotationAssertion( "FBbt:00004585") AnnotationAssertion( "HAO:0000120") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003176") AnnotationAssertion(rdfs:comment "arthropod specific groupings belong in separate ontology") AnnotationAssertion(rdfs:label "obsolete anterior notal wing process") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete posterior notal wing process) AnnotationAssertion( "FBbt:00004586") AnnotationAssertion( "HAO:0000758") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003177") AnnotationAssertion(rdfs:comment "arthropod specific groupings belong in separate ontology") AnnotationAssertion(rdfs:label "obsolete posterior notal wing process") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete postnotum) AnnotationAssertion( "FBbt:00004588") AnnotationAssertion( "HAO:0000786") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FBbt:00004588") "postscutellum") AnnotationAssertion( "UBERON:0003178") AnnotationAssertion(rdfs:comment "arthropod specific groupings belong in separate ontology") AnnotationAssertion(rdfs:label "obsolete postnotum") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete pleural wing process) AnnotationAssertion( "FBbt:00004595") AnnotationAssertion( "HAO:0000726") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003179") AnnotationAssertion(rdfs:comment "arthropod specific groupings belong in separate ontology") AnnotationAssertion(rdfs:label "obsolete pleural wing process") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete anepisternum) AnnotationAssertion( "FBbt:00004597") AnnotationAssertion( "HAO:0000094") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FBbt:00004597") "mesopleurite") AnnotationAssertion( "UBERON:0003180") AnnotationAssertion(rdfs:comment "arthropod specific groupings belong in separate ontology") AnnotationAssertion(rdfs:label "obsolete anepisternum") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete scutoscutellar suture) AnnotationAssertion( "FBbt:00004601") AnnotationAssertion( "HAO:0000920") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003181") AnnotationAssertion(rdfs:comment "arthropod specific groupings belong in separate ontology") AnnotationAssertion(rdfs:label "obsolete scutoscutellar suture") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete pleural suture) AnnotationAssertion( "FBbt:00004603") AnnotationAssertion( "HAO:0000725") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003182") AnnotationAssertion(rdfs:label "obsolete pleural suture") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete notopleural suture) AnnotationAssertion( "FBbt:00004604") AnnotationAssertion( "HAO:0000649") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003183") AnnotationAssertion(rdfs:label "obsolete notopleural suture") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete mesofurca) AnnotationAssertion( "FBbt:00004619") AnnotationAssertion( "HAO:0000547") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FBbt:00004619") "mesothoracic sternal apophysis") AnnotationAssertion( "UBERON:0003184") AnnotationAssertion(rdfs:comment "arthropod specific groupings belong in separate ontology") AnnotationAssertion(rdfs:label "obsolete mesofurca") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete metafurca) AnnotationAssertion( "FBbt:00004638") AnnotationAssertion( "HAO:0000592") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FBbt:00004638") "metathoracic sternal apophysis") AnnotationAssertion( "UBERON:0003185") AnnotationAssertion(rdfs:comment "arthropod specific groupings belong in separate ontology") AnnotationAssertion(rdfs:label "obsolete metafurca") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete coxa) AnnotationAssertion( "FBbt:00004641") AnnotationAssertion( "HAO:0000228") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003186") AnnotationAssertion(rdfs:comment "arthropod specific groupings belong in separate ontology") AnnotationAssertion(rdfs:label "obsolete coxa") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete pretarsus) AnnotationAssertion( "FBbt:00004653") AnnotationAssertion( "HAO:0000820") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003187") AnnotationAssertion(rdfs:comment "arthropod specific groupings belong in separate ontology") AnnotationAssertion(rdfs:label "obsolete pretarsus") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete auxilia) AnnotationAssertion( "FBbt:00004654") AnnotationAssertion( "HAO:0000153") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003188") AnnotationAssertion(rdfs:comment "arthropod specific groupings belong in separate ontology") AnnotationAssertion(rdfs:label "obsolete auxilia") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete unguitractor plate) AnnotationAssertion( "FBbt:00004658") AnnotationAssertion( "HAO:0001043") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003189") AnnotationAssertion(rdfs:comment "arthropod specific groupings belong in separate ontology") AnnotationAssertion(rdfs:label "obsolete unguitractor plate") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete empodium) AnnotationAssertion( "FBbt:00004659") AnnotationAssertion( "HAO:0000288") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003190") AnnotationAssertion(rdfs:label "obsolete empodium") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete tegula) AnnotationAssertion( "FBbt:00004730") AnnotationAssertion( "HAO:0000993") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003191") AnnotationAssertion(rdfs:comment "arthropod specific groupings belong in separate ontology") AnnotationAssertion(rdfs:label "obsolete tegula") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete axillary sclerite) AnnotationAssertion( "FBbt:00004737") AnnotationAssertion( "HAO:0000159") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003192") AnnotationAssertion(rdfs:comment "arthropod specific groupings belong in separate ontology") AnnotationAssertion(rdfs:label "obsolete axillary sclerite") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete axillary cord) AnnotationAssertion( "FBbt:00004744") AnnotationAssertion( "HAO:0000157") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003193") AnnotationAssertion(rdfs:comment "arthropod specific groupings belong in separate ontology") AnnotationAssertion(rdfs:label "obsolete axillary cord") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete crossvein) AnnotationAssertion( "FBbt:00004765") AnnotationAssertion( "HAO:0000236") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003195") AnnotationAssertion(rdfs:comment "arthropod specific groupings belong in separate ontology") AnnotationAssertion(rdfs:label "obsolete crossvein") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete wing cell) AnnotationAssertion( "FBbt:00004769") AnnotationAssertion( "HAO:0001091") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FBbt:00004769") "intervein") AnnotationAssertion( "UBERON:0003196") AnnotationAssertion(rdfs:comment "arthropod specific groupings belong in separate ontology") AnnotationAssertion(rdfs:label "obsolete wing cell") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete costal cell) AnnotationAssertion( "FBbt:00004770") AnnotationAssertion( "HAO:0000226") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003197") AnnotationAssertion(rdfs:comment "arthropod specific groupings belong in separate ontology") AnnotationAssertion(rdfs:label "obsolete costal cell") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete aedeagus) AnnotationAssertion( "FBbt:00004850") AnnotationAssertion( "HAO:0000091") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003198") AnnotationAssertion(rdfs:comment "arthropod specific groupings belong in separate ontology") AnnotationAssertion(rdfs:label "obsolete aedeagus") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (egg chamber) AnnotationAssertion( ) AnnotationAssertion( "FBbt:00004894") AnnotationAssertion( "HAO:0000287") AnnotationAssertion( "NCIT:C61362") AnnotationAssertion(Annotation( "ncithesaurus:Follicle") "UMLS:C1571705") AnnotationAssertion(Annotation( "FBbt:00004894") "germarium derived egg chamber") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FBbt:00004894") "follicle") AnnotationAssertion( "UBERON:0003199") AnnotationAssertion(rdfs:comment "Candidate for obsoletion") AnnotationAssertion(rdfs:label "egg chamber") AnnotationAssertion(rdfs:seeAlso "https://github.com/obophenotype/uberon/issues/476"^^xsd:anyURI) SubClassOf( ) # Class: (obsolete pedicel) AnnotationAssertion( "FBbt:00004920") AnnotationAssertion( "HAO:0000706") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003200") AnnotationAssertion(rdfs:label "obsolete pedicel") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete apodeme) AnnotationAssertion( "FBbt:00005091") AnnotationAssertion( "HAO:0000142") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003203") AnnotationAssertion(rdfs:comment "arthropod specific groupings belong in separate ontology") AnnotationAssertion(rdfs:label "obsolete apodeme") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete epipharynx) AnnotationAssertion( "FBbt:00005750") AnnotationAssertion( "HAO:0000301") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003204") AnnotationAssertion(rdfs:comment "arthropod specific groupings belong in separate ontology") AnnotationAssertion(rdfs:label "obsolete epipharynx") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete articulation) AnnotationAssertion( "FBbt:00005811") AnnotationAssertion( "HAO:0000151") AnnotationAssertion( "ncithesaurus:Articulation") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003205") AnnotationAssertion(rdfs:comment "incorrect grouping") AnnotationAssertion(rdfs:label "obsolete articulation") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete apophysis) AnnotationAssertion( "FBbt:00005813") AnnotationAssertion( "FMA:75428") AnnotationAssertion( "HAO:0000143") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003206") AnnotationAssertion(rdfs:comment "incorrect grouping") AnnotationAssertion(rdfs:label "obsolete apophysis") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete arthropod appendage segment) AnnotationAssertion( "UBERON:0010758") AnnotationAssertion( "HAO:0000145") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003207") AnnotationAssertion(rdfs:comment "Uberon now includes a generic appendicular segment class. Note the HAO class for appendage segment has been obsoleted") AnnotationAssertion(rdfs:label "obsolete arthropod appendage segment") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (blood nerve barrier) AnnotationAssertion(Annotation( ) Annotation( "GO:0008065") "Barrier between the perineurium of peripheral nerves and the vascular endothelium of endoneurial capillaries. The perineurium acts as a diffusion barrier, but ion permeability at the blood-nerve barrier is still higher than at the blood-brain barrier[GO].") AnnotationAssertion( ) AnnotationAssertion( "blood-nerve barrier") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003209") AnnotationAssertion(rdfs:label "blood nerve barrier") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (blood-cerebrospinal fluid barrier) AnnotationAssertion(Annotation( "MP:0006088") "Barrier in the choroid plexus located in the lateral, third, and fourth brain ventricles that controls the entrance of substances into the cerebrospinal fluid from the blood[MP].") AnnotationAssertion(Annotation( "MP:0006088") "blood-CSF barrier") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003210") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "blood-cerebrospinal fluid barrier") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (gustatory organ) AnnotationAssertion(Annotation( "FBC:auto_generated_definition") "Any sense organ that functions in (some) detection of chemical stimulus involved in sensory perception of taste (GO:0050912).") AnnotationAssertion( "FBbt:00005159") AnnotationAssertion( "FMA:77853") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "gustatory organ system organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "gustatory system organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "organ of gustatory organ system") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "organ of gustatory system") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "organ of taste system") AnnotationAssertion( "taste organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "taste system organ") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003212") AnnotationAssertion(rdfs:label "gustatory organ") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (mammary gland alveolus) AnnotationAssertion(Annotation( "GO:0060749") "A sac-like structure that is found in the mature gland[GO].") AnnotationAssertion( "EMAPA:36566") AnnotationAssertion( "FMA:73285") AnnotationAssertion( "MA:0002760") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "alveolus of lactiferous gland") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "alveolus of lobe of breast") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "alveolus of lobe of mammary gland") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "alveolus of mammary gland") AnnotationAssertion( "lactiferous alveolus") AnnotationAssertion( "lactiferous gland alveolus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "lobe of breast alveolus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "lobe of mammary gland alveolus") AnnotationAssertion( "mammary alveolus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "mammary alveoli") AnnotationAssertion( "UBERON:0003214") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "mammary gland alveolus") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (alveolus) AnnotationAssertion(Annotation( ) "Organ part that has the form of a hollow cavity[WP].") AnnotationAssertion( "alveolar") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EFO:0002513") AnnotationAssertion( "EV:0100043") AnnotationAssertion( "FMA:82493") AnnotationAssertion( "NCIT:C12986") AnnotationAssertion( "OpenCyc:Mx4rwN8NFZwpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Alveolus") "UMLS:C0034051") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003215") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "alveolus") SubClassOf( ) # Class: (hard palate) AnnotationAssertion(Annotation( ) Annotation( "GO:0060022") "Anterior portion of the palate consisting of bone and mucous membranes[GO]. The hard palate is formed from bony processes of the maxilla, premaxilla and palatine[Kardong].") AnnotationAssertion(Annotation( "FMA"^^xsd:string) "in FMA this is divided into bony parts and submucosa") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:18952") AnnotationAssertion( "FMA:55023") AnnotationAssertion( "GAID:221") AnnotationAssertion( "MA:0002477") AnnotationAssertion( "MAT:0000161") AnnotationAssertion( "MESH:D021362") AnnotationAssertion( "MIAA:0000161") AnnotationAssertion( "NCIT:C12230") AnnotationAssertion(Annotation( "ncithesaurus:Hard_Palate") "UMLS:C0226901") AnnotationAssertion( "hard palate") AnnotationAssertion(Annotation( ) Annotation( ) "palatum durum") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003216") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "hard palate") AnnotationAssertion( "Illu:mouth.jpg"^^xsd:anyURI) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf(Annotation( "check this") Annotation( "EMAPA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (neural lobe of neurohypophysis) AnnotationAssertion(Annotation( ) "The posterior pituitary (or neurohypophysis) comprises the posterior lobe of the pituitary gland and is part of the endocrine system. Despite its name, the posterior pituitary gland is not a gland, per se; rather, it is largely a collection of axonal projections from the hypothalamus that terminate behind the anterior pituitary gland. [WP,unvetted].") AnnotationAssertion( "TODO - compare with UBERON:0002198") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001180") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0030223693 Liem KF, Bemis WE, Walker WF, Grande L, Functional Anatomy of the Vertebrates: An Evolutionary Perspective (2001) p.510 and Figure 15-5") "It (the hypophysis) develops embryonically in all vertebrates from two ectodermal evaginations that meet and unite. An infundibulum grows ventrally from the diencephalon of the brain, and Rathke's pouch extends dorsally from the roof of the developing mouth, or stomodaeum. The infundibulum remains connected to the floor of the diencephalon, which becomes the hypothalamus, and gives rise to the part of the gland known as the neurohypophysis. (...) Rathke's pouch loses its connection with the stomodaeum in most adult vertebrates and gives rise to the rest of the gland, the adenohypophysis. (...) A well-developed hypophyseal system with functional connections to the hypothalamus is unique to craniates.[well established][VHOG]") AnnotationAssertion(Annotation( "BIRNLEX:941") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "PNHP") AnnotationAssertion(Annotation( "BTO:0000561") "posterior lobe") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:PNHP") AnnotationAssertion( "BIRNLEX:941") AnnotationAssertion( "BTO:0000561") AnnotationAssertion( "EHDAA2:0001418") AnnotationAssertion( "EHDAA:7542") AnnotationAssertion( "EMAPA:35595") AnnotationAssertion( "FMA:74636") AnnotationAssertion( "MA:0000860") AnnotationAssertion(Annotation( "BIRNLEX:941") "UMLS:C0447640") AnnotationAssertion( "VHOG:0001180") AnnotationAssertion(Annotation( "BIRNLEX:941") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=402") AnnotationAssertion(Annotation( "FMA:74636") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "lobus nervosus (Neurohypophysis)") AnnotationAssertion(Annotation( "FMA:74636") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "pars nervosa (hypophysis)") AnnotationAssertion(Annotation( "FMA:74636") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "pars nervosa (neurohypophysis)") AnnotationAssertion(Annotation( "FMA:74636") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "pars nervosa neurohypophysis") AnnotationAssertion( "pars nervosa of hypophysis") AnnotationAssertion( "pars nervosa of neurohypophysis") AnnotationAssertion( "pars nervosa of pituitary") AnnotationAssertion( "pars nervosa of posterior lobe of pituitary gland") AnnotationAssertion(Annotation( "BIRNLEX:941") "pars nervosa pituitary gland") AnnotationAssertion(Annotation( "MA:0000860") "pars posterior") AnnotationAssertion(Annotation( "FMA:74636") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "pars posterior of hypophysis") AnnotationAssertion(Annotation( "FMA:74636") "posterior lobe of neurohypophysis") AnnotationAssertion( "posterior lobe-3") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0000561") "caudal lobe") AnnotationAssertion(Annotation( "NeuroNames:402") Annotation( ) "eminentia medialis (Shantha)") AnnotationAssertion(Annotation( "NeuroNames:402") Annotation( ) "eminentia mediana") AnnotationAssertion(Annotation( "NeuroNames:402") Annotation( ) "eminentia postinfundibularis") AnnotationAssertion(Annotation( "BTO:0000561") "lobe caudalis cerebelli") AnnotationAssertion(Annotation( "NeuroNames:402") "medial eminence") AnnotationAssertion(Annotation( "BTO:0000561") "middle lobe") AnnotationAssertion( "neural component of pituitary") AnnotationAssertion(Annotation( "MA:0000860") "pars nervosa") AnnotationAssertion( "UBERON:0003217") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "neural lobe of neurohypophysis") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/b/b9/Pituitary_gland_representation.PNG"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "MP-def") ObjectSomeValuesFrom( )) # Class: (ovary septum) AnnotationAssertion(Annotation( "GO:0080126") "Septum that divides the ovary, the basal portion of a carpel or group of fused carpels, that encloses the ovule(s)[GO].") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003218") AnnotationAssertion(rdfs:label "ovary septum") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (metanephric mesenchyme) AnnotationAssertion(Annotation( ) Annotation( "GO:0072075") "One of the two embryological structures that give rise to the kidney (the other is the ureteric bud). The metanephric blastema mostly develops into nephrons, but can also form parts of the collecting duct system.[WP]. Metanephric mesenchyme is the tissue made up of loosely connected mesenchymal cells in the metanephros[GO].") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000540") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( ) "A mass of intermediate mesodermal cells around the distal end of the ureteric bud that gives rise to nephrons in the metanephric kidney. [TFD][VHOG]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000540") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0878932504 Gilbert SF, Developmental Biology (2006) p.462") "When the ureteric buds emerge from the nephric duct, they enter the metanephrogenic mesenchyme. The ureteric buds induce this mesenchymal tissue to condense around them and differentiate into the nephrons of the mammalian kidney. As this mesenchyme differentiates, it tells the ureteric bud to branch and grow.[well established][VHOG]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0004062") AnnotationAssertion( "EHDAA:4041") AnnotationAssertion( "EHDAA:5021") AnnotationAssertion( "EHDAA:5915") AnnotationAssertion( "EMAPA:17375") AnnotationAssertion( "VHOG:0000540") AnnotationAssertion(Annotation( ) "metanephric blastema") AnnotationAssertion(Annotation( ) "metanephric mesoderm") AnnotationAssertion(Annotation( "EHDAA:5021") "metanephrogenic mesenchyme") AnnotationAssertion(Annotation( "RETIRED_EHDAA2:0001139") "metanephros associated mesenchyme") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003220") AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "Genes: The positional specification of the metanephrogenic mesenchyme is negatively regulated by Foxc1 and Foxc2. Next the permanent kidney forming metanephrogenic mesenchyme is specified by Hox11 genes. The competence to respond to ureteric bud inducers is regulated by WT1. GDNF secretion restricted to posterior region by Robo2 and Sprouty1. The receptors for GDNF are synthesized in the nephric ducts and later in ureteric buds [ISBN:9780878932504 \"Developmental Biology\"]") AnnotationAssertion(rdfs:label "metanephric mesenchyme") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "ISBN:9780878932504") ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (phalanx) AnnotationAssertion(Annotation( ) Annotation( "VSAO:0000199") "Endochondral bones that are often elongate and arranged in rows of articulating elements, and form the visible part of the digits.") AnnotationAssertion( "phalangeal") AnnotationAssertion(Annotation( "WP"^^xsd:string) "In primates such as humans and monkeys, the thumb and big toe have two phalanges, while the other fingers and toes consist of three") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "CALOHA:TS-2211") AnnotationAssertion( "EMAPA:32614") AnnotationAssertion( "FMA:321661") AnnotationAssertion( "MA:0000304") AnnotationAssertion( "NCIT:C33317") AnnotationAssertion( "OpenCyc:Mx4rvolPZpwpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Phalanx") "UMLS:C0222682") AnnotationAssertion( "VSAO:0000199") AnnotationAssertion( "galen:Phalanx") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "digit long bone") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "long bone of digit") AnnotationAssertion( "phalange") AnnotationAssertion(Annotation( ) "phalanges") AnnotationAssertion(Annotation( ) "phalanx bone") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003221") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "phalanx") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (flexor digitorum superficialis) AnnotationAssertion(Annotation( ) "An extrinsic flexor muscle of the fingers at the proximal interphalangeal joints.[WP].") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:36202") AnnotationAssertion( "FMA:38469") AnnotationAssertion(Annotation( ) "flexor digitorum superficialis muscle") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "musculus flexor digitorum superficialis") AnnotationAssertion( "UBERON:0003222") AnnotationAssertion(rdfs:label "flexor digitorum superficialis") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/5/53/Gray421.png"^^xsd:anyURI) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf(Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "medial epicondyle of the humerus as well as parts of the radius and ulna.") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "anterior margins on the bases of the middle phalanges of the four fingers") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (chorion syncytiotrophoblast) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An extraembryonic structure that develops_from a syncytiotrophoblast and is part of a chorion.") AnnotationAssertion( "TODO - check") AnnotationAssertion( "EHDAA2:0001973") AnnotationAssertion( "EHDAA:156") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003224") AnnotationAssertion(rdfs:label "chorion syncytiotrophoblast") SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "polar trophectoderm syncytiotrophoblast") Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (supinator muscle) AnnotationAssertion(Annotation( ) "A muscle which originates on the distal humerus, inserts on the radius and accomplishes supination (rotation of the wrist).") AnnotationAssertion( "TODO - The term 'supinator' can also refer more generally to a muscle that causes supination of a part of the body. In older texts, the term 'supinator longus' was used to refer to the brachioradialis, and 'supinator brevis' was used to the muscle now known as the supinator.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:36208") AnnotationAssertion( "FMA:38512") AnnotationAssertion( "FMA:75002") AnnotationAssertion( "supinator") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "musculus supinator") AnnotationAssertion(Annotation( ) Annotation( ) "supinator brevus") AnnotationAssertion( "UBERON:0003228") AnnotationAssertion(rdfs:label "supinator muscle") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/c/c6/Gray420.png"^^xsd:anyURI) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf(Annotation( "deep branch of radial nerve") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "Lateral epicondyle of humerus supinator crest of ulna radial collateral ligament annular ligament") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "Lateral epicondyle of humerus supinator crest of ulna radial collateral ligament annular ligament") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "palaeos") ObjectSomeValuesFrom( )) SubClassOf(Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (epithelium of elbow) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An epithelium that is part of a elbow [Automatically generated definition].") AnnotationAssertion( "EHDAA2:0000430") AnnotationAssertion( "EHDAA:4168") AnnotationAssertion( "EHDAA:6214") AnnotationAssertion( "EMAPA:17415") AnnotationAssertion( "VHOG:0001044") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "cubital region epithelial tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "cubital region epithelium") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "elbow epithelial tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "elbow epithelium") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelial tissue of cubital region") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelial tissue of elbow") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelium of cubital region") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003229") AnnotationAssertion(rdfs:label "epithelium of elbow") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (epithelium of carpal region) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An epithelium that is part of a wrist [Automatically generated definition].") AnnotationAssertion( "EHDAA2:0000219") AnnotationAssertion( "EHDAA:5198") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "carpal region epithelial tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "carpal region epithelium") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelial tissue of carpal region") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelial tissue of wrist") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelium of wrist") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "wrist epithelial tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "wrist epithelium") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003230") AnnotationAssertion(rdfs:label "epithelium of carpal region") SubClassOf(Annotation( "EHDAA2"^^xsd:string) ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (epithelium of hip) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An epithelium that is part of a hip [Automatically generated definition].") AnnotationAssertion( "EHDAA2:0000784") AnnotationAssertion( "EHDAA:5155") AnnotationAssertion( "EHDAA:6180") AnnotationAssertion( "EMAPA:17491") AnnotationAssertion( "VHOG:0000779") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelial tissue of hip") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelial tissue of hip region") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelial tissue of regio coxae") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelium of hip region") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelium of regio coxae") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "hip epithelial tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "hip epithelium") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "hip region epithelial tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "hip region epithelium") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "regio coxae epithelial tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "regio coxae epithelium") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003231") AnnotationAssertion(rdfs:label "epithelium of hip") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (epithelium of knee) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An epithelium that is part of a knee [Automatically generated definition].") AnnotationAssertion( "EHDAA2:0000896") AnnotationAssertion( "EHDAA:5161") AnnotationAssertion( "EHDAA:6186") AnnotationAssertion( "EMAPA:17494") AnnotationAssertion( "VHOG:0000810") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelial tissue of knee") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "knee epithelial tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "knee epithelium") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003232") AnnotationAssertion(rdfs:label "epithelium of knee") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (epithelium of shoulder) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An epithelium that is part of a shoulder [Automatically generated definition].") AnnotationAssertion( "EHDAA2:0001835") AnnotationAssertion( "EHDAA:4182") AnnotationAssertion( "EHDAA:6230") AnnotationAssertion( "EMAPA:17422") AnnotationAssertion( "VHOG:0000761") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelial tissue of shoulder") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "shoulder epithelial tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "shoulder epithelium") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003233") AnnotationAssertion(rdfs:label "epithelium of shoulder") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (extensor pollicis longus muscle) AnnotationAssertion(Annotation( ) "The Extensor pollicis longus is much larger than the Extensor pollicis brevis muscle, the origin of which it partly covers.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:36196") AnnotationAssertion( "FMA:38521") AnnotationAssertion(Annotation( "FMA:38521") "extensor pollicis longus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "extensor pollicis longis") AnnotationAssertion(Annotation( ) Annotation( ) "musculus extensor pollicis longus") AnnotationAssertion( "UBERON:0003234") AnnotationAssertion(rdfs:label "extensor pollicis longus muscle") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/3/3e/Extensor_pollicis_longus_muscle.png"^^xsd:anyURI) SubClassOf(Annotation( "Wikipedia"^^xsd:string) ) SubClassOf(Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (epithelium of upper jaw) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An epithelium that is part of a upper jaw [Automatically generated definition].") AnnotationAssertion( "EHDAA2:0002119") AnnotationAssertion( "EHDAA:8027") AnnotationAssertion( "EMAPA:17943") AnnotationAssertion( "EMAPA:18971") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelial tissue of palatoquadrate arch") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelial tissue of upper jaw") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelium of palatoquadrate arch") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "palatoquadrate arch epithelial tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "palatoquadrate arch epithelium") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "upper jaw epithelial tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "upper jaw epithelium") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003235") AnnotationAssertion(rdfs:label "epithelium of upper jaw") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (epithelium of lower jaw) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An epithelium that is part of a lower jaw [Automatically generated definition].") AnnotationAssertion( "EHDAA2:0001019") AnnotationAssertion( "EHDAA:7999") AnnotationAssertion( "EMAPA:35516") AnnotationAssertion( "VHOG:0000802") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelial tissue of lower jaw") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelial tissue of ventral mandibular arch") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelium of ventral mandibular arch") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "lower jaw epithelial tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "lower jaw epithelium") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "ventral mandibular arch epithelial tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "ventral mandibular arch epithelium") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003236") AnnotationAssertion(rdfs:label "epithelium of lower jaw") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (epithelium of superior semicircular canal) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An epithelium that is part of an anterior semicircular canal [Automatically generated definition].") AnnotationAssertion( "EHDAA:7806") AnnotationAssertion( "EMAPA:17301") AnnotationAssertion( "RETIRED_EHDAA2:0001961") AnnotationAssertion( "VHOG:0001039") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "anterior semicircular canal epithelial tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "anterior semicircular canal epithelium") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelial tissue of anterior semicircular canal") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelial tissue of superior semicircular canal") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelium of anterior semicircular canal") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "superior semicircular canal epithelial tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "superior semicircular canal epithelium") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003238") AnnotationAssertion(rdfs:label "epithelium of superior semicircular canal") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses(Annotation( "lexical"^^xsd:string) ) # Class: (epithelium of posterior semicircular canal) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An epithelium that is part of a posterior semicircular canal [Automatically generated definition].") AnnotationAssertion( "EHDAA:7800") AnnotationAssertion( "EMAPA:17298") AnnotationAssertion( "RETIRED_EHDAA2:0001491") AnnotationAssertion( "VHOG:0000758") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelial tissue of posterior semicircular canal") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "posterior semicircular canal epithelial tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "posterior semicircular canal epithelium") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003239") AnnotationAssertion(rdfs:label "epithelium of posterior semicircular canal") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (epithelium of lateral semicircular canal) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An epithelium that is part of a lateral semicircular canal [Automatically generated definition].") AnnotationAssertion( "EHDAA:7794") AnnotationAssertion( "EMAPA:17823") AnnotationAssertion( "RETIRED_EHDAA2:0000922") AnnotationAssertion( "VHOG:0000480") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelial tissue of lateral semicircular canal") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "lateral semicircular canal epithelial tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "lateral semicircular canal epithelium") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003240") AnnotationAssertion(rdfs:label "epithelium of lateral semicircular canal") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (epithelium of utricle) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An epithelium that is part of a utricle of membranous labyrinth [Automatically generated definition].") AnnotationAssertion( "TODO - check relationships w.r.t macula") AnnotationAssertion( "EHDAA:4730") AnnotationAssertion( "EMAPA:17295") AnnotationAssertion( "EMAPA:17298") AnnotationAssertion( "EMAPA:17301") AnnotationAssertion( "EMAPA:17820") AnnotationAssertion( "EMAPA:17823") AnnotationAssertion( "FMA:75604") AnnotationAssertion( "MA:0001204") AnnotationAssertion( "RETIRED_EHDAA2:0002155") AnnotationAssertion( "VHOG:0000634") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelial tissue of membranous labyrinth utricle") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelial tissue of utricle") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelial tissue of utricle of membranous labyrinth") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelial tissue of utriculus (labyrinthus vestibularis)") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelium of membranous labyrinth utricle") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelium of utricle of membranous labyrinth") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelium of utriculus (labyrinthus vestibularis)") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "membranous labyrinth utricle epithelial tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "membranous labyrinth utricle epithelium") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "utricle epithelial tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "utricle epithelium") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "utricle of membranous labyrinth epithelial tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "utricle of membranous labyrinth epithelium") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "utriculus (labyrinthus vestibularis) epithelial tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "utriculus (labyrinthus vestibularis) epithelium") AnnotationAssertion(Annotation( "FMA:75604") "epithelium of macula of utricle of membranous labyrinth") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003241") AnnotationAssertion(rdfs:label "epithelium of utricle") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (epithelium of saccule) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An epithelium that is part of a saccule of membranous labyrinth [Automatically generated definition].") AnnotationAssertion( "TODO - check relationships w.r.t macula") AnnotationAssertion( "EHDAA:4724") AnnotationAssertion( "EMAPA:17292") AnnotationAssertion( "FMA:75605") AnnotationAssertion( "MA:0001202") AnnotationAssertion( "RETIRED_EHDAA2:0001771") AnnotationAssertion( "VHOG:0000633") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelial tissue of membranous labyrinth saccule") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelial tissue of saccule") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelial tissue of saccule of membranous labyrinth") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelial tissue of sacculus (labyrinthus vestibularis)") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelium of membranous labyrinth saccule") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelium of saccule of membranous labyrinth") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelium of sacculus (labyrinthus vestibularis)") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "membranous labyrinth saccule epithelial tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "membranous labyrinth saccule epithelium") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "saccule epithelial tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "saccule epithelium") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "saccule of membranous labyrinth epithelial tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "saccule of membranous labyrinth epithelium") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "sacculus (labyrinthus vestibularis) epithelial tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "sacculus (labyrinthus vestibularis) epithelium") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:75605") "epithelium of macula of saccule of membranous labyrinth") AnnotationAssertion( "UBERON:0003242") AnnotationAssertion(rdfs:label "epithelium of saccule") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (epithelium of cochlear duct) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An epithelium that is part of a cochlear duct of membranous labyrinth [Automatically generated definition].") AnnotationAssertion( "EHDAA:4722") AnnotationAssertion( "EMAPA:17600") AnnotationAssertion( "RETIRED_EHDAA2:0000264") AnnotationAssertion( "VHOG:0000640") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "Reissner's canal epithelial tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "Reissner's canal epithelium") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "cochlear duct epithelial tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "cochlear duct epithelium") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "cochlear duct of membranous labyrinth epithelial tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "cochlear duct of membranous labyrinth epithelium") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelial tissue of Reissner's canal") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelial tissue of cochlear duct") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelial tissue of cochlear duct of membranous labyrinth") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelium of Reissner's canal") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelium of cochlear duct of membranous labyrinth") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003243") AnnotationAssertion(rdfs:label "epithelium of cochlear duct") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (epithelium of mammary gland) AnnotationAssertion(Annotation( "MGI:csmith"^^xsd:string) Annotation( "MP:0009504") "The epithelial layer of the luminal surfaces of the mammary gland.") AnnotationAssertion( ) AnnotationAssertion( "BTO:0001430") AnnotationAssertion( "CALOHA:TS-0593") AnnotationAssertion( "EHDAA2:0001057") AnnotationAssertion( "EHDAA:6526") AnnotationAssertion( "EMAPA:17760") AnnotationAssertion( "FMA:74445") AnnotationAssertion( "MA:0000792") AnnotationAssertion( "NCIT:C12937") AnnotationAssertion(Annotation( "ncithesaurus:Mammary_Epithelium") "UMLS:C0596882") AnnotationAssertion( "VHOG:0001088") AnnotationAssertion(Annotation( "FMA:74445") "epithelium of lactiferous gland") AnnotationAssertion(Annotation( "FMA:74445") "lactiferous gland epithelium") AnnotationAssertion(Annotation( "BTO:0001430") "mammary epithelium") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mammary gland epithelial tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mammary gland epithelium") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003244") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "epithelium of mammary gland") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) Annotation( "Wikipathways:WP2062") ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (epithelium of endolymphatic sac) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An epithelium that is part of a endolymphatic sac [Automatically generated definition].") AnnotationAssertion( "See https://github.com/obophenotype/uberon/issues/1305") AnnotationAssertion( "EHDAA:7765") AnnotationAssertion( "EMAPA:17595") AnnotationAssertion( "RETIRED_EHDAA2:0000443") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "endolymphatic sac epithelial tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "endolymphatic sac epithelium") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelial tissue of endolymphatic sac") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003246") AnnotationAssertion(rdfs:label "epithelium of endolymphatic sac") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (epithelium of forearm) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An epithelium that is part of a lower arm [Automatically generated definition].") AnnotationAssertion( "EHDAA2:0000554") AnnotationAssertion( "EHDAA:4174") AnnotationAssertion( "EHDAA:6220") AnnotationAssertion( "EMAPA:17418") AnnotationAssertion( "VHOG:0001096") AnnotationAssertion( "forearm epithelium") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003247") AnnotationAssertion(rdfs:label "epithelium of forearm") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (epithelium of footplate) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An epithelium that is part of a footplate.") AnnotationAssertion( "EHDAA2:0000548") AnnotationAssertion( "EHDAA:5145") AnnotationAssertion( "EHDAA:6144") AnnotationAssertion( "EMAPA:32655") AnnotationAssertion( "foot plate epithelium") AnnotationAssertion(Annotation( "EHDAA2:0000548") "footplate epithelium") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003248") AnnotationAssertion(rdfs:label "epithelium of footplate") SubClassOf(Annotation( "EHDAA2"^^xsd:string) ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (epithelium of otic placode) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An epithelium that is part of a otic placode [Automatically generated definition].") AnnotationAssertion( "check ZFA, placemeant, appears to refer to both adult structures and primordium") AnnotationAssertion( "EHDAA2:0001341") AnnotationAssertion( "EHDAA:510") AnnotationAssertion( "EMAPA:16197") AnnotationAssertion( "VHOG:0000636") AnnotationAssertion( "ZFA:0007068") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelial tissue of otic placode") AnnotationAssertion(Annotation( ) "otic epithelium") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "otic placode epithelial tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "otic placode epithelium") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003249") AnnotationAssertion(rdfs:label "epithelium of otic placode") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (rectus capitis lateralis muscle) AnnotationAssertion(Annotation( ) "A muscle that arises from the upper surface of the transverse process of the atlas and inserts into the under surface of the jugular process of the occipital bone.") AnnotationAssertion( "Lateral flexion") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:46316") AnnotationAssertion(Annotation( "FMA:46316") "lateral rectus capitis") AnnotationAssertion(Annotation( ) Annotation( ) "musculus rectus capitis lateralis") AnnotationAssertion(Annotation( ) "rectus capitis lateralis") AnnotationAssertion(Annotation( ) "rectus capitus lateralis") AnnotationAssertion(Annotation( ) "rectus capitus lateralis muscle") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003250") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "rectus capitis lateralis muscle") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/b/b7/Rectus_capitis_lateralis_muscle.PNG"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "jugular process") Annotation( "Wikipedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (temporal part of head) AnnotationAssertion( "see UBERONREF:0000007 'temporal region'") AnnotationAssertion( ) AnnotationAssertion( "FMA:63867") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:63867") "temporal region") AnnotationAssertion(Annotation( "FMA:63867") "temporal region of head") AnnotationAssertion( "UBERON:0003251") AnnotationAssertion(rdfs:label "temporal part of head") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (thoracic rib cage) AnnotationAssertion(Annotation( ) "Subdivision of skeletal system that consists of all ribs in an organism connected to the sternum and the vertebrae. Some vertebrates have abdominal ribs (gastrialia), not connected to the vertebrate - these are not considered part of the rib case.") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0002100") Annotation( "TAO"^^xsd:string) Annotation( "TAO:wd"^^xsd:string) "Anatomical cluster that consists of more than one rib in an individual.[TAO]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:7480") AnnotationAssertion( "galen:RibCage") AnnotationAssertion(Annotation( "FMA:7480") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "cavea thoracis") AnnotationAssertion(Annotation( "FMA:7480") "rib cage") AnnotationAssertion(Annotation( "FMA:7480") "thoracic cage") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "cavea thoracis") AnnotationAssertion( "UBERON:0003252") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "thoracic rib cage") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/8/88/Gray112.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (neck of rib) AnnotationAssertion(Annotation( ) "The neck of the rib is the flattened portion which extends lateralward from the head; it is about 2.5 cm. long, and is placed in front of the transverse process of the lower of the two vertebrC& with which the head articulates. Its anterior surface is flat and smooth, its posterior rough for the attachment of the ligament of the neck, and perforated by numerous foramina. Of its two borders the superior presents a rough crest (crista colli costE) for the attachment of the anterior costotransverse ligament; its inferior border is rounded. On the posterior surface at the junction of the neck and body, and nearer the lower than the upper border, is an eminencebthe tubercle; it consists of an articular and a non-articular portion. The articular portion, the lower and more medial of the two, presents a small, oval surface for articulation with the end of the transverse process of the lower of the two vertebrC& to which the head is connected. The non-articular portion is a rough elevation, and affords attachment to the ligament of the tubercle. The tubercle is much more prominent in the upper than in the lower ribs.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37826") AnnotationAssertion( "FMA:7576") AnnotationAssertion(Annotation( ) Annotation( ) "collum costae") AnnotationAssertion(Annotation( "FMA:7576") "rib neck") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "collum costae") AnnotationAssertion( "UBERON:0003253") AnnotationAssertion(rdfs:label "neck of rib") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/5/5c/Gray122.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (amniotic ectoderm) AnnotationAssertion( "we make the germ layer relationship develops_from, as currently the germ layers are declared to be purely embryonic. TODO - check. WP:Amnion - In the human embryo the earliest stages of the formation of the amnion have not been observed; in the youngest embryo which has been studied the amnion was already present as a closed sac, and appears in the inner cell-mass as a cavity. This cavity is roofed in by a single stratum of flattened, ectodermal cells, the amniotic ectoderm, and its floor consists of the prismatic ectoderm of the embryonic disk-the continuity between the roof and floor being established at the margin of the embryonic disk. Outside the amniotic ectoderm is a thin layer of mesoderm, which is continuous with that of the somatopleure and is connected by the body-stalk with the mesodermal lining of the chorion.") AnnotationAssertion( "UBERON:0008359") AnnotationAssertion( "BTO:0000897") AnnotationAssertion( "EHDAA2:0000117") AnnotationAssertion( "EHDAA:138") AnnotationAssertion( "EMAPA:16110") AnnotationAssertion( "VHOG:0000621") AnnotationAssertion(Annotation( "EHDAA2:0000117") "amnion ectoderm") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "amnion ectoderm") AnnotationAssertion(Annotation( ) "amnionic ectoderm") AnnotationAssertion(Annotation( "ISBN:9780878932504") "amnionic ectoderm") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0000897") "amnion epithelium") AnnotationAssertion( "UBERON:0003254") AnnotationAssertion(rdfs:label "amniotic ectoderm") SubClassOf(Annotation( "EHDAA2"^^xsd:string) ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (obsolete ectoderm of embryo) AnnotationAssertion( "EHDAA:132") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "developmental tissue ectoderm") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "ectoderm of developmental tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "embryo ectoderm") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003255") AnnotationAssertion(rdfs:comment "deleted because the original definition was unclear. Me may reconstitute this and to distinguish extramebryonic from embryonic germ layers. See amniotic ectoderm and amniotic mesoderm") AnnotationAssertion(rdfs:label "obsolete ectoderm of embryo") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete endoderm of embryo) AnnotationAssertion( "EHDAA:94") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "developmental tissue endoderm") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "embryo endoderm") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "endoderm of developmental tissue") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003256") AnnotationAssertion(rdfs:comment "deleted because the original definition was unclear. Me may reconstitute this and to distinguish extramebryonic from embryonic germ layers. See amniotic ectoderm and amniotic mesoderm") AnnotationAssertion(rdfs:label "obsolete endoderm of embryo") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (yolk sac endoderm) AnnotationAssertion(Annotation( "UBERON:cjm"^^xsd:string) "The portion of the yolk sac that is derived from endoderm and lines the yolk sac.") AnnotationAssertion( "EHDAA2:0002215") AnnotationAssertion( "EHDAA:166") AnnotationAssertion( "EMAPA:16086") AnnotationAssertion( "VHOG:0000626") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003257") AnnotationAssertion(rdfs:label "yolk sac endoderm") SubClassOf(Annotation( "EHDAA2"^^xsd:string) ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (endoderm of foregut) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An endoderm that is part of a foregut [Automatically generated definition].") AnnotationAssertion( "TODO - check") AnnotationAssertion( "EHDAA2:0004568") AnnotationAssertion( "EHDAA:524") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "foregut endoderm") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003258") AnnotationAssertion(rdfs:label "endoderm of foregut") SubClassOf( ) SubClassOf( ) SubClassOf( ) # Class: (endoderm of midgut) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An endoderm that is part of a midgut [Automatically generated definition].") AnnotationAssertion( "TODO - check") AnnotationAssertion( "EHDAA:987") AnnotationAssertion( "EMAPA:16257") AnnotationAssertion( "RETIRED_EHDAA2:0001194") AnnotationAssertion( "VHOG:0001080") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "midgut endoderm") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003259") AnnotationAssertion(rdfs:label "endoderm of midgut") SubClassOf( ) SubClassOf( ) SubClassOf( ) # Class: (endoderm of hindgut) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An endoderm that is part of a hindgut [Automatically generated definition].") AnnotationAssertion( "TODO - check") AnnotationAssertion( "EHDAA:979") AnnotationAssertion( "RETIRED_EHDAA2:0000781") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "hindgut endoderm") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003260") AnnotationAssertion(rdfs:label "endoderm of hindgut") SubClassOf( ) SubClassOf( ) SubClassOf( ) # Class: (thyroid primordium endoderm) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An endoderm that is part of a thyroid primordium.") AnnotationAssertion( "UBERON:0005235") AnnotationAssertion( "EHDAA:956") AnnotationAssertion( "EMAPA:25357") AnnotationAssertion( "RETIRED_EHDAA2:0002035") AnnotationAssertion( "VHOG:0001089") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "endoderm of thyroid primordium") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003261") AnnotationAssertion(rdfs:label "thyroid primordium endoderm") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "ZFA-propagated") ObjectSomeValuesFrom( )) # Class: (amniotic mesoderm) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A mesenchyme that is part of a amnion.") AnnotationAssertion( "we make the germ layer relationship develops_from, as currently the germ layers are declared to be purely embryonic. TODO - check. WP:Amnion - In the human embryo the earliest stages of the formation of the amnion have not been observed; in the youngest embryo which has been studied the amnion was already present as a closed sac, and appears in the inner cell-mass as a cavity. This cavity is roofed in by a single stratum of flattened, ectodermal cells, the amniotic ectoderm, and its floor consists of the prismatic ectoderm of the embryonic disk-the continuity between the roof and floor being established at the margin of the embryonic disk. Outside the amniotic ectoderm is a thin layer of mesoderm, which is continuous with that of the somatopleure and is connected by the body-stalk with the mesodermal lining of the chorion.") AnnotationAssertion( "UBERON:0003411") AnnotationAssertion( "EHDAA2:0000118") AnnotationAssertion( "EHDAA:140") AnnotationAssertion( "EMAPA:16111") AnnotationAssertion( "EMAPA:16265") AnnotationAssertion( "VHOG:0000622") AnnotationAssertion(Annotation( "EHDAA2:0000118") "amnion mesenchyme") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "amnion mesoderm") AnnotationAssertion(Annotation( ) "amnionic mesoderm") AnnotationAssertion(Annotation( "EMAPA:16265") "mesenchyme of amnion") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "EMAPA:16265") "amnionic mesenchyme") AnnotationAssertion(Annotation( "EMAPA:16111") "amnionic mesoderm") AnnotationAssertion( "UBERON:0003262") AnnotationAssertion(rdfs:label "amniotic mesoderm") SubClassOf(Annotation( "EHDAA2"^^xsd:string) ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (chorionic mesenchyme) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A mesenchyme that is part of a chorion.") AnnotationAssertion( "TODO - check") AnnotationAssertion( "UBERON:0003423") AnnotationAssertion( "EHDAA2:0003245") AnnotationAssertion( "EHDAA:154") AnnotationAssertion( "EMAPA:16114") AnnotationAssertion( "EMAPA:16266") AnnotationAssertion( "RETIRED_EHDAA2:0000247") AnnotationAssertion( "VHOG:0000620") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "chorion mesenchyme") AnnotationAssertion(Annotation( "RETIRED_EHDAA2:0000247") "chorion mesoderm") AnnotationAssertion(Annotation( "EHDAA2:0003245") "chorionic mesenchyme") AnnotationAssertion( "mesenchyme of chorion") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mesenchyme of chorion (vertebrates)") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003265") AnnotationAssertion(rdfs:label "chorionic mesenchyme") SubClassOf(Annotation( "EHDAA2"^^xsd:string) ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "ISBN:0073040584"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (obsolete nerve of central nervous system) AnnotationAssertion( "EHDAA:2851") AnnotationAssertion( "EMAPA:17263") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003266") AnnotationAssertion(rdfs:comment "obsoleted pending formal definition of nerve, with explicit reference to PNS vs CNS. See https://github.com/obophenotype/mouse-anatomy-ontology/issues/6") AnnotationAssertion(rdfs:label "obsolete nerve of central nervous system") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (tooth of upper jaw) AnnotationAssertion(Annotation( ) "A calcareous tooth that is part of the upper jaw region. In mammals, the upper jaw teeth are attached to the maxilla.") AnnotationAssertion( "Note that we follow EHDAA2 and consider teeth part of the jaw skeleton") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EHDAA:8045") AnnotationAssertion( "EMAPA:17938") AnnotationAssertion( "MA:0001909") AnnotationAssertion( "NCIT:C49792") AnnotationAssertion(Annotation( "ncithesaurus:Upper_Jaw_Tooth") "UMLS:C1710581") AnnotationAssertion(Annotation( "MA:0001909") "upper jaw tooth") AnnotationAssertion(Annotation( "NCBITaxon:40674") "maxillary tooth") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003267") AnnotationAssertion(rdfs:label "tooth of upper jaw") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (tooth of lower jaw) AnnotationAssertion(Annotation( ) "A calcareous tooth that is part of the lower jaw region. In mammals, the lower jaw teeth are attached to the mandible (dentary).") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0001029") AnnotationAssertion( "EHDAA:8009") AnnotationAssertion( "EMAPA:17917") AnnotationAssertion( "FMA:321647") AnnotationAssertion( "MA:0001907") AnnotationAssertion( "NCIT:C49582") AnnotationAssertion(Annotation( "ncithesaurus:Lower_Jaw_Tooth") "UMLS:C1708757") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "calcareous tooth of lower jaw") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "lower jaw calcareous tooth") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "lower jaw dentine containing tooth") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "lower jaw tooth") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "lower jaw vertebrate tooth") AnnotationAssertion(Annotation( "NCBITaxon:40674") "mandibular tooth") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003268") AnnotationAssertion(rdfs:label "tooth of lower jaw") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (skeletal muscle tissue of eye) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A portion of skeletal muscle tissue that is part of a eye [Automatically generated definition].") AnnotationAssertion( "EHDAA2:0000486") AnnotationAssertion( "EHDAA:2923") AnnotationAssertion( "EMAPA:17844") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "eye skeletal muscle") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "eye skeletal muscle tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "skeletal muscle tissue of eye") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "EHDAA2:0000486") "eye skeletal muscle group") AnnotationAssertion( "UBERON:0003269") AnnotationAssertion(rdfs:label "skeletal muscle tissue of eye") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete skeletal muscle tissue of tongue) AnnotationAssertion( "UBERON:0000378") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003273") AnnotationAssertion(rdfs:comment "Merged as it was equivalent to parent - see https://github.com/obophenotype/uberon/issues/331") AnnotationAssertion(rdfs:label "obsolete skeletal muscle tissue of tongue") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (mesothelium of omental bursa) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A mesothelium that is part of a lesser sac [Automatically generated definition].") AnnotationAssertion( "EHDAA2:0004557") AnnotationAssertion( "EHDAA:2339") AnnotationAssertion( "EMAPA:16890") AnnotationAssertion( "RETIRED_EHDAA2:0001299") AnnotationAssertion( "VHOG:0000441") AnnotationAssertion(Annotation( "EHDAA2:0004557") "lesser sac mesothelium") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "omental bursa mesothelium") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "VHOG:0000441") "omental bursa mehomhelium") AnnotationAssertion( "UBERON:0003274") AnnotationAssertion(rdfs:label "mesothelium of omental bursa") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete skeleton of embryo) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A skeletal system that is part of a embryo [Automatically generated definition].") AnnotationAssertion( "UBERON:0004288") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "developmental tissue set of all bones") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "developmental tissue set of bones of body") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "developmental tissue skeletal system") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "developmental tissue skeleton") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "developmental tissue skeleton system") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "embryo set of all bones") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "embryo set of bones of body") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "embryo skeletal system") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "embryo skeleton") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "embryo skeleton system") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "set of all bones of developmental tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "set of all bones of embryo") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "set of bones of body of developmental tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "set of bones of body of embryo") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "skeletal system of developmental tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "skeletal system of embryo") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "skeleton of developmental tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "skeleton system of developmental tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "skeleton system of embryo") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003276") AnnotationAssertion(rdfs:label "obsolete skeleton of embryo") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (skeleton of upper jaw) AnnotationAssertion(Annotation( ) "A subdivision of the skeleton that corresponds to the upper part of the mouth. The lower jaw skeleton includes the following elements, when present: upper jaw teeth, the maxilla and other lower jaw bones.") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000429") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0030223693 Liem KF, Bemis WE, Walker WF, Grande L, Functional Anatomy of the Vertebrates: An Evolutionary Perspective (2001) p.241 and p.101") "The jaw joint of all jawed vertebrates, except for mammals, involves the quadrate and articular bones, or the posterior ends of the palatoquadrate and mandibular cartilages; A correlate of the conversion of the articular and quadrate bones to the malleus and incus is that all adult mammals have a jaw joint that lies between the dentary of the lower jaw and the squamosal bone of the skull roof.[well established][VHOG]") AnnotationAssertion(Annotation( "EMAPA"^^xsd:string) "EMAPA/MA placement unclear. See https://github.com/obophenotype/mouse-anatomy-ontology/issues/102") AnnotationAssertion(Annotation( "MA:0001908") "upper jaw") AnnotationAssertion( "AAO:0000622") AnnotationAssertion( "EHDAA2:0002128") AnnotationAssertion( "EHDAA:8041") AnnotationAssertion( "EMAPA:17927") AnnotationAssertion( "FMA:54397") AnnotationAssertion( "MA:0001908") AnnotationAssertion( "VHOG:0000429") AnnotationAssertion( "XAO:0003087") AnnotationAssertion( "upper jaw skeleton") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003277") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "skeleton of upper jaw") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (skeleton of lower jaw) AnnotationAssertion(Annotation( ) "A subdivision of the skeleton that corresponds to the lower part of the mouth. The lower jaw skeleton includes the following elements, when present: lower jaw teeth, the mandible and other lower jaw bones, and Meckel's cartilage.") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0001273") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "The ventral portion of the first pharyngeal arch, comprising the lower jaw.[TAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000428") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0030223693 Liem KF, Bemis WE, Walker WF, Grande L, Functional Anatomy of the Vertebrates: An Evolutionary Perspective (2001) p.241 and p.101") "The jaw joint of all jawed vertebrates, except for mammals, involves the quadrate and articular bones, or the posterior ends of the palatoquadrate and mandibular cartilages; A correlate of the conversion of the articular and quadrate bones to the malleus and incus is that all adult mammals have a jaw joint that lies between the dentary of the lower jaw and the squamosal bone of the skull roof.[well established][VHOG]") AnnotationAssertion(Annotation( "FMA"^^xsd:string) "Inclusion of the FMA class 'lower jaw' is debatable - this mostly corresponds to the lower jaw skeleton (with 'maxillary part of mouth' corresponding to the upper jaw region); however, the FMA class also includes gingiva. See also: https://github.com/obophenotype/mouse-anatomy-ontology/issues/102") AnnotationAssertion(Annotation( "MA:0001906") "lower jaw") AnnotationAssertion(Annotation( "ZFA:0001273") "lower jaw") AnnotationAssertion(Annotation( "ZFA:0001273") "mandible") AnnotationAssertion( "AAO:0000274") AnnotationAssertion( "EHDAA2:0004606") AnnotationAssertion( "EHDAA:8005") AnnotationAssertion( "EMAPA:17906") AnnotationAssertion( "EMAPA:17910") AnnotationAssertion( "FMA:54398") AnnotationAssertion( "MA:0001906") AnnotationAssertion( "TAO:0001273") AnnotationAssertion( "VHOG:0000428") AnnotationAssertion( "XAO:0003084") AnnotationAssertion( "ZFA:0001273") AnnotationAssertion(Annotation( "AAO:0000274") "lower jaw skeleton") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "TAO:0001273") Annotation( ) "mandibles") AnnotationAssertion(Annotation( "ZFA:0001273") "mandibular series") AnnotationAssertion( "UBERON:0003278") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "skeleton of lower jaw") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "VHOG-modified") ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) SubClassOf( ObjectSomeValuesFrom( )) # Class: (endothelium of trachea) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An endothelium that is part of a trachea.") AnnotationAssertion( "EHDAA:3082") AnnotationAssertion( "RETIRED_EHDAA2:0002068") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "endothelium of windpipe") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "trachea endothelium") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "windpipe endothelium") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003279") AnnotationAssertion(rdfs:label "endothelium of trachea") SubClassOf( ) SubClassOf( ) SubClassOf( ) # Class: (endothelium of main bronchus) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An endothelium that is part of a main bronchus [Automatically generated definition].") AnnotationAssertion( "EHDAA:3076") AnnotationAssertion( "RETIRED_EHDAA2:0001046") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bronchus principalis endothelium") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "endothelium of bronchus principalis") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "endothelium of primary bronchus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "endothelium of principal bronchus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "main bronchus endothelium") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "primary bronchus endothelium") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "principal bronchus endothelium") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003280") AnnotationAssertion(rdfs:label "endothelium of main bronchus") SubClassOf( ) SubClassOf( ) SubClassOf( ) # Class: (mesentery of stomach) AnnotationAssertion(Annotation( ) "The portion of the primitive mesentery that encloses the stomach; from its dorsal sheet, the greater omentum develops, and from its ventral sheet, the lesser omentum.") AnnotationAssertion( "TODO - check primitive vs developed") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000358") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( ) "The portion of the primitive mesentery that encloses the stomach; from its dorsal sheet, the greater omentum develops, and from its ventral sheet, the lesser omentum. [TFD][VHOG]") AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0001922") AnnotationAssertion( "EHDAA:2999") AnnotationAssertion( "EMAPA:17024") AnnotationAssertion( "MA:0001617") AnnotationAssertion( "VHOG:0000358") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mesentery of ventriculus") AnnotationAssertion(Annotation( ) "mesogaster") AnnotationAssertion(Annotation( "MA:0001617") "mesogastium") AnnotationAssertion(Annotation( ) "mesogastrium") AnnotationAssertion(Annotation( "Obol:obol") "stomach mesentery") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "ventriculus mesentery") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003281") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "mesentery of stomach") SubClassOf(Annotation( "MA"^^xsd:string) ) SubClassOf(Annotation( "MA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (mesentery of heart) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "A mesentery that surrounds the heart.") AnnotationAssertion( "EHDAA:432") AnnotationAssertion( "EMAPA:16212") AnnotationAssertion( "RETIRED_EHDAA2:0000739") AnnotationAssertion( "VHOG:0000353") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "heart mesentery") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "EMAPA:16212") "cardiac mesentery") AnnotationAssertion(Annotation( "MA:0000098") "mesocardium") AnnotationAssertion( "UBERON:0003282") AnnotationAssertion(rdfs:label "mesentery of heart") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (mesentery of oesophagus) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A mesentery that is part of a esophagus [Automatically generated definition].") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000415") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0521617147 Stevens CE and Hume ID, Comparative physiology of the vertebrate digestive system (2004) p.11") "Although all vertebrates have a digestive tract and accessory glands, various parts of this system are not necessarily homologous, analogous, or even present in all species. Therefore, broad comparisons can be best made under the listings of headgut, foregut, midgut, pancreas and biliary system, hindgut.[uncertain][VHOG]") AnnotationAssertion( "EHDAA2:0001288") AnnotationAssertion( "EHDAA:2943") AnnotationAssertion( "EMAPA:16836") AnnotationAssertion( "MA:0001569") AnnotationAssertion( "VHOG:0000415") AnnotationAssertion(Annotation( "MA:0001569") "esophagus mesentery") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "gullet mesentery") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mesentery of esophagus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mesentery of gullet") AnnotationAssertion( "meso-esophagus") AnnotationAssertion(Annotation( "VHOG:0000415") "oesophagus mesentery") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003283") AnnotationAssertion(rdfs:label "mesentery of oesophagus") SubClassOf( ) SubClassOf( ) # Class: (mesentery of midgut) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A mesentery that is part of a midgut [Automatically generated definition].") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000413") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0521617147 Stevens CE and Hume ID, Comparative physiology of the vertebrate digestive system (2004) p.11") "Although all vertebrates have a digestive tract and accessory glands, various parts of this system are not necessarily homologous, analogous, or even present in all species. Therefore, broad comparisons can be best made under the listings of headgut, foregut, midgut, pancreas and biliary system, hindgut.[uncertain][VHOG]") AnnotationAssertion( "EHDAA2:0001202") AnnotationAssertion( "EHDAA:3031") AnnotationAssertion( "EMAPA:16721") AnnotationAssertion( "EMAPA:17039") AnnotationAssertion( "EMAPA:17197") AnnotationAssertion( "VHOG:0000413") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "midgut mesentery") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003284") AnnotationAssertion(rdfs:label "mesentery of midgut") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete limb of embryo) AnnotationAssertion( "UBERON:0002101") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003285") AnnotationAssertion(rdfs:label "obsolete limb of embryo") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (foregut region of duodenum) AnnotationAssertion( "EHDAA2:0000560") AnnotationAssertion( "EHDAA:3830") AnnotationAssertion( "EMAPA:17178") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "foregut duodenum") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003286") AnnotationAssertion(rdfs:label "foregut region of duodenum") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (midgut region of duodenum) AnnotationAssertion( "EHDAA2:0001189") AnnotationAssertion( "EHDAA:3937") AnnotationAssertion( "EMAPA:17193") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "midgut duodenum") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003287") AnnotationAssertion(rdfs:label "midgut region of duodenum") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (meninx of midbrain) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A meninx that is part of a midbrain [Automatically generated definition].") AnnotationAssertion( "consider changing genus to subdivision of meninx") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000012") Annotation( "VHOG"^^xsd:string) Annotation( ) "Meninges that are part of the midbrain. [Bgee_curator][VHOG]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000012") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0072528305 Kardong KV, Vertebrates: Comparative Anatomy, Function, Evolution (2006) p.639"^^xsd:string) "In fishes, the meninges consist of a single membrane, the primitive meninx, wrapped around the brain and spinal cord. With the adoption of terrestrial life, the meninges doubled. In amphibians, reptiles, and birds, the meninges include a thick outer dura mater derived from mesoderm and a thin inner secondary meninx. (...) In mammals, the dura mater persists, but division of the secondary meninx yields both the arachnoid and the pia mater from ectomesoderm.[well established][VHOG]") AnnotationAssertion( "EHDAA2:0001174") AnnotationAssertion( "EHDAA:3708") AnnotationAssertion( "EMAPA:17791") AnnotationAssertion( "MA:0001058") AnnotationAssertion( "RETIRED_EHDAA2:0001109") AnnotationAssertion( "VHOG:0000012") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) Annotation( ) "meninges of midbrain") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) Annotation( ) "midbrain meninges") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "midbrain meninx") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "VHOG:0000012") Annotation( ) "mesencephalon meninges") AnnotationAssertion( "UBERON:0003288") AnnotationAssertion(rdfs:label "meninx of midbrain") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (meninx of telencephalon) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A meninx that is part of a telencephalon [Automatically generated definition].") AnnotationAssertion( "consider changing genus to subdivision of meninx") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000010") Annotation( "VHOG"^^xsd:string) Annotation( ) "Meninges that are part of the telencephalon. [Bgee_curator][VHOG]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000010") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0072528305 Kardong KV, Vertebrates: Comparative Anatomy, Function, Evolution (2006) p.639"^^xsd:string) "In fishes, the meninges consist of a single membrane, the primitive meninx, wrapped around the brain and spinal cord. With the adoption of terrestrial life, the meninges doubled. In amphibians, reptiles, and birds, the meninges include a thick outer dura mater derived from mesoderm and a thin inner secondary meninx. (...) In mammals, the dura mater persists, but division of the secondary meninx yields both the arachnoid and the pia mater from ectomesoderm.[well established][VHOG]") AnnotationAssertion( "EHDAA2:0001990") AnnotationAssertion( "EHDAA:5476") AnnotationAssertion( "EMAPA:17774") AnnotationAssertion( "MA:0000979") AnnotationAssertion( "VHOG:0000010") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) Annotation( ) "meninges of telencephalon") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) Annotation( ) "telencephalon meninges") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "telencephalon meninx") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003289") AnnotationAssertion(rdfs:label "meninx of telencephalon") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (meninx of diencephalon) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A meninx that is part of a diencephalon [Automatically generated definition].") AnnotationAssertion( "consider changing genus to subdivision of meninx") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000009") Annotation( "VHOG"^^xsd:string) Annotation( ) "Meninges that are part of the diencephalon. [Bgee_curator][VHOG]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000009") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0072528305 Kardong KV, Vertebrates: Comparative Anatomy, Function, Evolution (2006) p.639"^^xsd:string) "In fishes, the meninges consist of a single membrane, the primitive meninx, wrapped around the brain and spinal cord. With the adoption of terrestrial life, the meninges doubled. In amphibians, reptiles, and birds, the meninges include a thick outer dura mater derived from mesoderm and a thin inner secondary meninx. (...) In mammals, the dura mater persists, but division of the secondary meninx yields both the arachnoid and the pia mater from ectomesoderm.[well established][VHOG]") AnnotationAssertion( "EHDAA2:0000399") AnnotationAssertion( "EHDAA:5458") AnnotationAssertion( "EMAPA:17764") AnnotationAssertion( "MA:0000826") AnnotationAssertion( "VHOG:0000009") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "between brain meninges") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "between brain meninx") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "diencephalon meninges") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "diencephalon meninx") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "interbrain meninges") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "interbrain meninx") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mature diencephalon meninges") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mature diencephalon meninx") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "meninges of between brain") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "meninges of diencephalon") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "meninges of interbrain") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "meninges of mature diencephalon") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "meninx of between brain") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "meninx of interbrain") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "meninx of mature diencephalon") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003290") AnnotationAssertion(rdfs:label "meninx of diencephalon") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (meninx of hindbrain) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A meninx that is part of a hindbrain [Automatically generated definition].") AnnotationAssertion( "consider changing genus to subdivision of meninx") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000011") Annotation( "VHOG"^^xsd:string) Annotation( ) "Meninges that are part of the hindbrain. [Bgee_curator][VHOG]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000011") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0072528305 Kardong KV, Vertebrates: Comparative Anatomy, Function, Evolution (2006) p.639"^^xsd:string) "In fishes, the meninges consist of a single membrane, the primitive meninx, wrapped around the brain and spinal cord. With the adoption of terrestrial life, the meninges doubled. In amphibians, reptiles, and birds, the meninges include a thick outer dura mater derived from mesoderm and a thin inner secondary meninx. (...) In mammals, the dura mater persists, but division of the secondary meninx yields both the arachnoid and the pia mater from ectomesoderm.[well established][VHOG]") AnnotationAssertion( "EHDAA2:0000770") AnnotationAssertion( "EHDAA:3688") AnnotationAssertion( "EMAPA:17783") AnnotationAssertion( "MA:0000987") AnnotationAssertion( "VHOG:0000011") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "hindbrain meninges") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "hindbrain meninx") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "meninges of hindbrain") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "VHOG:0000011") Annotation( ) "rhomencephalon meninges") AnnotationAssertion( "UBERON:0003291") AnnotationAssertion(rdfs:label "meninx of hindbrain") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "definitional"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (meninx of spinal cord) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A meninx that is part of a spinal cord [Automatically generated definition].") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000443") Annotation( "VHOG"^^xsd:string) Annotation( ) "Meninges that are part of the spinal cord. [Bgee_curator][VHOG]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000443") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0072528305 Kardong KV, Vertebrates: Comparative Anatomy, Function, Evolution (2006) p.639"^^xsd:string) "In fishes, the meninges consist of a single membrane, the primitive meninx, wrapped around the brain and spinal cord. With the adoption of terrestrial life, the meninges doubled. In amphibians, reptiles, and birds, the meninges include a thick outer dura mater derived from mesoderm and a thin inner secondary meninx. (...) In mammals, the dura mater persists, but division of the secondary meninx yields both the arachnoid and the pia mater from ectomesoderm.[well established][VHOG]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "CALOHA:TS-2148") AnnotationAssertion( "EHDAA2:0001895") AnnotationAssertion( "EHDAA:2865") AnnotationAssertion( "EMAPA:17804") AnnotationAssertion( "MA:0001130") AnnotationAssertion( "NCIT:C12350") AnnotationAssertion(Annotation( "ncithesaurus:Spinal_Meninges") "UMLS:C0037938") AnnotationAssertion( "VHOG:0000443") AnnotationAssertion(Annotation( ) "menines of spinal cord") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "meninges of spinal cord") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "spinal cord meninges") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "spinal cord meninx") AnnotationAssertion(Annotation( ) "spinal meninges") AnnotationAssertion( "spinal meninx") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003292") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "meninx of spinal cord") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (gland of foregut) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A gland that is part of a foregut [Automatically generated definition].") AnnotationAssertion( "EHDAA2:0000567") AnnotationAssertion( "EHDAA:950") AnnotationAssertion( "EMAPA:16557") AnnotationAssertion( "VHOG:0000650") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "foregut gland") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003294") AnnotationAssertion(rdfs:label "gland of foregut") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pharyngeal gland) AnnotationAssertion(Annotation( ) "Racemose mucous glands beneath the mucous membrane of the pharynx.") AnnotationAssertion( "BTO:0004849") AnnotationAssertion( "EHDAA2:0001461") AnnotationAssertion( "EHDAA:2967") AnnotationAssertion( "FMA:55075") AnnotationAssertion(Annotation( "EHDAA2:0001461") "pharynx gland") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0004849") "glandulae pharyngeae") AnnotationAssertion( "UBERON:0003295") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "pharyngeal gland") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "BTO"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (gland of diencephalon) AnnotationAssertion(Annotation( ) "Any gland that is part of the diencephalon. Examples: pineal gland, neurohypophysis.") AnnotationAssertion( "EHDAA2:0000395") AnnotationAssertion( "EHDAA:4475") AnnotationAssertion( "EMAPA:16897") AnnotationAssertion( "VHOG:0000653") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "diencephalon gland") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "interbrain gland") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003296") AnnotationAssertion(rdfs:label "gland of diencephalon") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (gland of integumental system) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A gland that is part of a integumental system [Automatically generated definition].") AnnotationAssertion( "EHDAA2:0000837") AnnotationAssertion( "EHDAA:6522") AnnotationAssertion( "EMAPA:17758") AnnotationAssertion( "MA:0000144") AnnotationAssertion( "VHOG:0000654") AnnotationAssertion(Annotation( ) "integumental gland") AnnotationAssertion(Annotation( ) "integumental system gland") AnnotationAssertion(Annotation( ) "integumentary gland") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003297") AnnotationAssertion(rdfs:label "gland of integumental system") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (roof plate of midbrain) AnnotationAssertion(Annotation( "MGI:anna"^^xsd:string) Annotation( "MGI:smb"^^xsd:string) Annotation( "MP:0006103") "The mesencephalic roof plate, including the caudal and rostral part of the midbrain roof.") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000772") Annotation( "VHOG"^^xsd:string) Annotation( ) "Roof plate that is part of the midbrain. [Bgee_curator][VHOG]") AnnotationAssertion( "DHBA:12320") AnnotationAssertion( "EHDAA2:0001177") AnnotationAssertion( "EHDAA:3712") AnnotationAssertion( "EMAPA:16981") AnnotationAssertion( "RETIRED_EHDAA2:0001111") AnnotationAssertion( "TAO:0000355") AnnotationAssertion( "VHOG:0000772") AnnotationAssertion( "ZFA:0000355") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "midbrain roof plate") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "midbrain roofplate") AnnotationAssertion(Annotation( "VHOG:0000772") "roof plate midbrain") AnnotationAssertion(Annotation( "ZFA:0000355") "roof plate midbrain region") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "roofplate of midbrain") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "EMAPA:16981") "midbrain roof") AnnotationAssertion(Annotation( "VHOG:0000772") "roof plate mesencephalon") AnnotationAssertion(Annotation( "VHOG:0000772") "roofplate midbrain") AnnotationAssertion( "UBERON:0003299") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "roof plate of midbrain") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (roof plate of telencephalon) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A roof plate that is part of a telencephalon [Automatically generated definition].") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000774") Annotation( "VHOG"^^xsd:string) Annotation( ) "Roof plate that is part of the telencephalon. [Bgee_curator][VHOG]") AnnotationAssertion( "EHDAA2:0001994") AnnotationAssertion( "EHDAA:3512") AnnotationAssertion( "EMAPA:16657") AnnotationAssertion( "VHOG:0000774") AnnotationAssertion(Annotation( "VHOG:0000774") "roof plate telencephalon") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "roofplate of telencephalon") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "telencephalon roof plate") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "telencephalon roofplate") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "VHOG:0000774") "roofplate medulla telencephalon") AnnotationAssertion( "UBERON:0003300") AnnotationAssertion(rdfs:label "roof plate of telencephalon") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (roof plate of diencephalon) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A roof plate that is part of a diencephalon [Automatically generated definition].") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000771") Annotation( "VHOG"^^xsd:string) Annotation( ) "Roof plate that is part of the diencephalon. [Bgee_curator][VHOG]") AnnotationAssertion( "EHDAA2:0000402") AnnotationAssertion( "EHDAA:1979") AnnotationAssertion( "EHDAA:2657") AnnotationAssertion( "EHDAA:3494") AnnotationAssertion( "EMAPA:16909") AnnotationAssertion( "TAO:0001358") AnnotationAssertion( "VHOG:0000771") AnnotationAssertion( "ZFA:0001358") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "between brain roof plate") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "between brain roofplate") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "diencephalon roof plate") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "diencephalon roofplate") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "interbrain roof plate") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "interbrain roofplate") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mature diencephalon roof plate") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mature diencephalon roofplate") AnnotationAssertion(Annotation( "ZFA:0001358") "roof plate diencephalic region") AnnotationAssertion(Annotation( "VHOG:0000771") "roof plate diencephalon") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "roof plate of between brain") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "roof plate of interbrain") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "roof plate of mature diencephalon") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "roofplate of between brain") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "roofplate of diencephalon") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "roofplate of interbrain") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "roofplate of mature diencephalon") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "VHOG:0000771") "roofplate medulla diencephalon") AnnotationAssertion( "UBERON:0003301") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "roof plate of diencephalon") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (roof plate of metencephalon) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A roof plate that is part of a metencephalon [Automatically generated definition].") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000770") Annotation( "VHOG"^^xsd:string) Annotation( ) "Roof plate that is part of the metencephalon. [Bgee_curator][VHOG]") AnnotationAssertion( "EHDAA2:0001160") AnnotationAssertion( "EHDAA:5524") AnnotationAssertion( "EMAPA:16483") AnnotationAssertion( "EMAPA:16487") AnnotationAssertion( "VHOG:0000770") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epencephalon-2 roof plate") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epencephalon-2 roofplate") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "metencephalon roof plate") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "metencephalon roofplate") AnnotationAssertion(Annotation( "VHOG:0000770") "roof plate metencephalon") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "roof plate of epencephalon-2") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "roofplate of epencephalon-2") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "roofplate of metencephalon") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "VHOG:0000770") "roofplate medulla metencephalon") AnnotationAssertion( "UBERON:0003302") AnnotationAssertion(rdfs:label "roof plate of metencephalon") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (roof plate of medulla oblongata) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A roof plate that is part of a medulla oblongata [Automatically generated definition].") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000776") Annotation( "VHOG"^^xsd:string) Annotation( ) "Roof plate that is part of the medulla oblongata. [Bgee_curator][VHOG]") AnnotationAssertion( "EHDAA2:0001099") AnnotationAssertion( "EHDAA:7614") AnnotationAssertion( "VHOG:0000776") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bulb roof plate") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bulb roofplate") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "medulla oblongata roof plate") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "medulla oblongata roofplate") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "medulla oblonmgata roof plate") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "medulla oblonmgata roofplate") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "metepencephalon roof plate") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "metepencephalon roofplate") AnnotationAssertion(Annotation( "VHOG:0000776") "roof plate medulla oblongata") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "roof plate of bulb") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "roof plate of medulla oblonmgata") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "roof plate of metepencephalon") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "roofplate of bulb") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "roofplate of medulla oblongata") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "roofplate of medulla oblonmgata") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "roofplate of metepencephalon") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "VHOG:0000776") "roofplate medulla oblongata") AnnotationAssertion( "UBERON:0003303") AnnotationAssertion(rdfs:label "roof plate of medulla oblongata") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (mesoderm blood island) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A blood island that is part of a mesoderm.") AnnotationAssertion(Annotation( "EHDAA2"^^xsd:string) "in EHDAA2, gives rise to blood and dorsal aorta") AnnotationAssertion( "UBERON:0003305") AnnotationAssertion( "EHDAA2:0003241") AnnotationAssertion( "EHDAA:170") AnnotationAssertion( "EMAPA:16115") AnnotationAssertion(Annotation( "EHDAA2:0003241") Annotation( ) "mesoderm blood islands") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mesenchyme blood island") AnnotationAssertion( "UBERON:0003304") AnnotationAssertion(rdfs:label "mesoderm blood island") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (floor plate of neural tube) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A floor plate that is part of a neural tube [Automatically generated definition].") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000300") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "DOI:10.1016/S0959-4388(99)00003-3 Holland LZ and Holland ND, Chordate origins of the vertebrate central nervous system. Current Opinion in Neurobiology (1999)") "In summary, the available data for tunicates, amphioxus, and vertebrates indicate that a floorplate-like structure was already present in the proximate invertebrate ancestor of the vertebrates and that the genetic mechanisms for DV patterning of the nerve cord were also largely in place.[well established][VHOG]") AnnotationAssertion( "although 'floor plate' is classically defined as being located on the neural tube, in many AOs the floor plate continues post-embryonically after the neural tube has ceased to exist. We introduce this class for the neural tube specific structure") AnnotationAssertion( "EFO:0003688") AnnotationAssertion( "EHDAA2:0001256") AnnotationAssertion( "EHDAA:2871") AnnotationAssertion( "EHDAA:910") AnnotationAssertion( "EMAPA:16165") AnnotationAssertion( "TAO:0001434") AnnotationAssertion( "VHOG:0000300") AnnotationAssertion( "ZFA:0001434") AnnotationAssertion(Annotation( "ZFA:0001434") "floor plate neural tube") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "floorplate of neural tube") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "neural tube floor plate") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "neural tube floorplate") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "VHOG:0000300") "floorplate neural tube") AnnotationAssertion( "UBERON:0003306") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "floor plate of neural tube") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (floor plate of midbrain) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A floor plate that is part of a midbrain [Automatically generated definition].") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0002196") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "Floor plate that is part of the midbrain.[TAO]") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0002196") Annotation( "TAO"^^xsd:string) "relationship type change: subclass multi-tissue structure (CARO:0000055) CHANGED TO: develops_from multi-tissue structure (UBERON:0000481)[TAO]") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0002196") Annotation( "TAO"^^xsd:string) "relationship type change: subclass multi-tissue structure (CARO:0000055) CHANGED TO: part_of multi-tissue structure (UBERON:0000481)[TAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000780") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "DOI:10.1016/S0959-4388(99)00003-3 Holland LZ and Holland ND, Chordate origins of the vertebrate central nervous system. Current Opinion in Neurobiology (1999)") "In summary, the available data for tunicates, amphioxus, and vertebrates indicate that a floorplate-like structure was already present in the proximate invertebrate ancestor of the vertebrates and that the genetic mechanisms for DV patterning of the nerve cord were also largely in place.[well established][VHOG]") AnnotationAssertion( "DHBA:12325") AnnotationAssertion( "EHDAA2:0001164") AnnotationAssertion( "EHDAA:3698") AnnotationAssertion( "EMAPA:16975") AnnotationAssertion( "RETIRED_EHDAA2:0001106") AnnotationAssertion( "TAO:0002196") AnnotationAssertion( "VHOG:0000780") AnnotationAssertion( "ZFA:0001677") AnnotationAssertion(Annotation( "VHOG:0000780") "floor plate midbrain") AnnotationAssertion(Annotation( "ZFA:0001677") "floor plate midbrain region") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "floorplate of midbrain") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "midbrain floor plate") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "midbrain floorplate") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "VHOG:0000780") "floor plate mesencephalon") AnnotationAssertion(Annotation( "VHOG:0000780") "floorplate midbrain") AnnotationAssertion( "UBERON:0003307") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "floor plate of midbrain") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (floor plate of telencephalon) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A floor plate that is part of a telencephalon [Automatically generated definition].") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000783") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "DOI:10.1016/S0959-4388(99)00003-3 Holland LZ and Holland ND, Chordate origins of the vertebrate central nervous system. Current Opinion in Neurobiology (1999)") "In summary, the available data for tunicates, amphioxus, and vertebrates indicate that a floorplate-like structure was already present in the proximate invertebrate ancestor of the vertebrates and that the genetic mechanisms for DV patterning of the nerve cord were also largely in place.[well established][VHOG]") AnnotationAssertion( "EHDAA2:0001983") AnnotationAssertion( "EHDAA:3498") AnnotationAssertion( "EMAPA:16655") AnnotationAssertion( "TAO:0000914") AnnotationAssertion( "VHOG:0000783") AnnotationAssertion( "ZFA:0000914") AnnotationAssertion(Annotation( "ZFA:0000914") "floor plate telencephalic region") AnnotationAssertion(Annotation( "VHOG:0000783") "floor plate telencephalon") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "floorplate of telencephalon") AnnotationAssertion(Annotation( "ZFA:0000914") "floorplate telencephalon") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "telencephalon floor plate") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "telencephalon floorplate") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003308") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "floor plate of telencephalon") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (floor plate of diencephalon) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A floor plate that is part of a diencephalon [Automatically generated definition].") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000782") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "DOI:10.1016/S0959-4388(99)00003-3 Holland LZ and Holland ND, Chordate origins of the vertebrate central nervous system. Current Opinion in Neurobiology (1999)") "In summary, the available data for tunicates, amphioxus, and vertebrates indicate that a floorplate-like structure was already present in the proximate invertebrate ancestor of the vertebrates and that the genetic mechanisms for DV patterning of the nerve cord were also largely in place.[well established][VHOG]") AnnotationAssertion( "EHDAA2:0000388") AnnotationAssertion( "EHDAA:1975") AnnotationAssertion( "EHDAA:2651") AnnotationAssertion( "EHDAA:3480") AnnotationAssertion( "EMAPA:16903") AnnotationAssertion( "TAO:0000871") AnnotationAssertion( "VHOG:0000782") AnnotationAssertion( "ZFA:0000871") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "between brain floor plate") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "between brain floorplate") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "diencephalon floor plate") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "diencephalon floorplate") AnnotationAssertion(Annotation( "ZFA:0000871") "floor plate diencephalic region") AnnotationAssertion(Annotation( "VHOG:0000782") "floor plate diencephalon") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "floor plate of between brain") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "floor plate of interbrain") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "floor plate of mature diencephalon") AnnotationAssertion(Annotation( "ZFA:0000871") "floorplate diencephalon") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "floorplate of between brain") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "floorplate of diencephalon") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "floorplate of interbrain") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "floorplate of mature diencephalon") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "interbrain floor plate") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "interbrain floorplate") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mature diencephalon floor plate") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mature diencephalon floorplate") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003309") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "floor plate of diencephalon") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (floor plate of metencephalon) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A floor plate that is part of a metencephalon [Automatically generated definition].") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000784") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "DOI:10.1016/S0959-4388(99)00003-3 Holland LZ and Holland ND, Chordate origins of the vertebrate central nervous system. Current Opinion in Neurobiology (1999)") "In summary, the available data for tunicates, amphioxus, and vertebrates indicate that a floorplate-like structure was already present in the proximate invertebrate ancestor of the vertebrates and that the genetic mechanisms for DV patterning of the nerve cord were also largely in place.[well established][VHOG]") AnnotationAssertion( "EHDAA2:0001158") AnnotationAssertion( "EHDAA:5500") AnnotationAssertion( "EMAPA:16291") AnnotationAssertion( "EMAPA:16294") AnnotationAssertion( "EMAPA:17258") AnnotationAssertion( "VHOG:0000784") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epencephalon-2 floor plate") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epencephalon-2 floorplate") AnnotationAssertion(Annotation( "VHOG:0000784") "floor plate metencephalon") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "floor plate of epencephalon-2") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "floorplate of epencephalon-2") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "floorplate of metencephalon") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "metencephalon floor plate") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "metencephalon floorplate") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "VHOG:0000784") "floorplate metencephalon") AnnotationAssertion( "UBERON:0003310") AnnotationAssertion(rdfs:label "floor plate of metencephalon") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (floor plate of medulla oblongata) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A floor plate that is part of a medulla oblongata [Automatically generated definition].") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000786") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "DOI:10.1016/S0959-4388(99)00003-3 Holland LZ and Holland ND, Chordate origins of the vertebrate central nervous system. Current Opinion in Neurobiology (1999)") "In summary, the available data for tunicates, amphioxus, and vertebrates indicate that a floorplate-like structure was already present in the proximate invertebrate ancestor of the vertebrates and that the genetic mechanisms for DV patterning of the nerve cord were also largely in place.[well established][VHOG]") AnnotationAssertion( "EHDAA2:0001097") AnnotationAssertion( "EHDAA:7590") AnnotationAssertion( "EMAPA:17551") AnnotationAssertion( "VHOG:0000786") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bulb floor plate") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bulb floorplate") AnnotationAssertion(Annotation( "VHOG:0000786") "floor plate medulla oblongata") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "floor plate of bulb") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "floor plate of medulla oblonmgata") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "floor plate of metepencephalon") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "floorplate of bulb") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "floorplate of medulla oblongata") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "floorplate of medulla oblonmgata") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "floorplate of metepencephalon") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "medulla oblongata floor plate") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "medulla oblongata floorplate") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "medulla oblonmgata floor plate") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "medulla oblonmgata floorplate") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "metepencephalon floor plate") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "metepencephalon floorplate") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "VHOG:0000786") "floorplate medulla oblongata") AnnotationAssertion( "UBERON:0003311") AnnotationAssertion(rdfs:label "floor plate of medulla oblongata") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (mesenchyme of testis) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "Mesenchyme that is part of a developing testis [Automatically generated definition].") AnnotationAssertion( "EHDAA2:0002010") AnnotationAssertion( "EHDAA:8150") AnnotationAssertion( "EMAPA:35858") AnnotationAssertion( "VHOG:0001442") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "testis mesenchyme") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003312") AnnotationAssertion(rdfs:label "mesenchyme of testis") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (eye mesenchyme) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "Mesenchyme that is part of a developing camera-type eye.") AnnotationAssertion( "TODO - change mesenchyme relationships to precursor_of") AnnotationAssertion( "EHDAA2:0000485") AnnotationAssertion( "EHDAA:2910") AnnotationAssertion( "EMAPA:16673") AnnotationAssertion( "VHOG:0001084") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mesenchyme of eye") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003314") AnnotationAssertion(rdfs:label "eye mesenchyme") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (mesenchyme of ovary) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "Mesenchyme that is part of a developing ovary [Automatically generated definition].") AnnotationAssertion( "EHDAA2:0001362") AnnotationAssertion( "EHDAA:8128") AnnotationAssertion( "VHOG:0001441") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "female reproductive system gonad mesenchyme") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "female reproductive system gonada mesenchyme") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "gonad of female reproductive system mesenchyme") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "gonada of female reproductive system mesenchyme") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mesenchyme of female reproductive system gonad") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mesenchyme of female reproductive system gonada") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mesenchyme of gonad of female reproductive system") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mesenchyme of gonada of female reproductive system") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "ovary mesenchyme") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003315") AnnotationAssertion(rdfs:label "mesenchyme of ovary") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (mesenchyme of yolk sac) AnnotationAssertion(Annotation( "UBERON:cjm"^^xsd:string) "The portion of the yolk sac that is derived from mesoderm and consists of mesenchyme.") AnnotationAssertion( "UBERON:0003264") AnnotationAssertion( "EHDAA2:0002216") AnnotationAssertion( "EHDAA:168") AnnotationAssertion( "EHDAA:205") AnnotationAssertion( "EMAPA:16087") AnnotationAssertion( "EMAPA:16267") AnnotationAssertion( "VHOG:0000503") AnnotationAssertion( "VHOG:0000617") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "yolk sac mesenchyme") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003316") AnnotationAssertion(rdfs:label "mesenchyme of yolk sac") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (odontogenic papilla of incisor) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An odontogenic papilla that is part of a incisor tooth [Automatically generated definition].") AnnotationAssertion( "EMAPA:32893") AnnotationAssertion( "MA:0003231") AnnotationAssertion(Annotation( ) "incisor dental papilla") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "incisor odontogenic papilla") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "incisor tooth odontogenic papilla") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "odontogenic papilla of incisor tooth") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003317") AnnotationAssertion(rdfs:label "odontogenic papilla of incisor") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (mesenchyme of elbow) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "Mesenchyme that is part of a developing elbow [Automatically generated definition].") AnnotationAssertion( "EHDAA2:0000432") AnnotationAssertion( "EHDAA:4170") AnnotationAssertion( "EHDAA:6216") AnnotationAssertion( "EMAPA:17416") AnnotationAssertion( "VHOG:0001075") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "cubital region mesenchyme") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "elbow mesenchyme") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mesenchyme of cubital region") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003318") AnnotationAssertion(rdfs:label "mesenchyme of elbow") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (mesenchyme of carpal region) AnnotationAssertion(Annotation( ) "Mesenchyme of the carpal region that contributes to the carpal skeleton.") AnnotationAssertion( "EHDAA2:0000220") AnnotationAssertion( "EHDAA:5200") AnnotationAssertion( "EMAPA:19122") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "carpal region mesenchyme") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "carpus mesenchyme") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mesenchyme of wrist") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "wrist mesenchyme") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003319") AnnotationAssertion(rdfs:label "mesenchyme of carpal region") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (mesenchyme of hip) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "Mesenchyme that is part of a developing hip [Automatically generated definition].") AnnotationAssertion( "EHDAA2:0000786") AnnotationAssertion( "EHDAA:5157") AnnotationAssertion( "EHDAA:6182") AnnotationAssertion( "EMAPA:17492") AnnotationAssertion( "VHOG:0001029") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "hip mesenchyme") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "hip region mesenchyme") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mesenchyme of hip region") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mesenchyme of regio coxae") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "regio coxae mesenchyme") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003320") AnnotationAssertion(rdfs:label "mesenchyme of hip") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (mesenchyme of knee) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "Mesenchyme that is part of a developing knee [Automatically generated definition].") AnnotationAssertion( "EHDAA2:0000898") AnnotationAssertion( "EHDAA:5163") AnnotationAssertion( "EHDAA:6188") AnnotationAssertion( "EMAPA:17495") AnnotationAssertion( "VHOG:0001070") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "knee mesenchyme") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003321") AnnotationAssertion(rdfs:label "mesenchyme of knee") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (mesenchyme of shoulder) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "Mesenchyme that is part of a developing shoulder [Automatically generated definition].") AnnotationAssertion( "EHDAA2:0001837") AnnotationAssertion( "EHDAA:4184") AnnotationAssertion( "EHDAA:6232") AnnotationAssertion( "EMAPA:17423") AnnotationAssertion( "VHOG:0001035") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "shoulder mesenchyme") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003322") AnnotationAssertion(rdfs:label "mesenchyme of shoulder") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (mesenchyme of upper jaw) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "Mesenchyme that is part of a developing upper jaw [Automatically generated definition].") AnnotationAssertion( "EHDAA2:0002124") AnnotationAssertion( "EHDAA:8031") AnnotationAssertion( "EMAPA:17929") AnnotationAssertion( "VHOG:0001099") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mesenchyme of palatoquadrate arch") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "palatoquadrate arch mesenchyme") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "upper jaw mesenchyme") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003323") AnnotationAssertion(rdfs:label "mesenchyme of upper jaw") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (mesenchyme of lower jaw) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "Mesenchyme that is part of a developing lower jaw [Automatically generated definition].") AnnotationAssertion( "EHDAA2:0001024") AnnotationAssertion( "EHDAA:8003") AnnotationAssertion( "EMAPA:17916") AnnotationAssertion( "VHOG:0001069") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "lower jaw mesenchyme") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mesenchyme of ventral mandibular arch") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "ventral mandibular arch mesenchyme") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003324") AnnotationAssertion(rdfs:label "mesenchyme of lower jaw") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (mesenchyme of pinna) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "Mesenchyme that is part of a developing pinna [Automatically generated definition].") AnnotationAssertion(Annotation( "EMAPA"^^xsd:string) "EMAPA divides this spatially into condensation + rest, and temporally into mesenchyme and cartilage condensation") AnnotationAssertion( "EHDAA2:0001469") AnnotationAssertion( "EHDAA:8981") AnnotationAssertion( "EMAPA:17591") AnnotationAssertion( "VHOG:0000747") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "auricle mesenchyme") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "auricle of ear mesenchyme") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "auricle of external ear mesenchyme") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "auricula (auris externa) mesenchyme") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "auricula mesenchyme") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mesenchyme of auricle") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mesenchyme of auricle of ear") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mesenchyme of auricle of external ear") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mesenchyme of auricula") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mesenchyme of auricula (auris externa)") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mesenchyme of pinna of ear") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "pinna mesenchyme") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "pinna of ear mesenchyme") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003325") AnnotationAssertion(rdfs:label "mesenchyme of pinna") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (mesenchyme of mammary gland) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "Mesenchyme that is part of a developing mammary gland.") AnnotationAssertion( "EHDAA2:0001058") AnnotationAssertion( "EHDAA:6528") AnnotationAssertion( "EMAPA:17761") AnnotationAssertion( "VHOG:0001087") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "lactiferous gland mesenchyme") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "lobe of breast mesenchyme") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "lobe of mammary gland mesenchyme") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mammary gland mesenchyme") AnnotationAssertion( "mammary mesenchyme") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mesenchyme of lactiferous gland") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mesenchyme of lobe of breast") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mesenchyme of lobe of mammary gland") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003326") AnnotationAssertion(rdfs:label "mesenchyme of mammary gland") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (mesenchyme of forearm) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "Mesenchyme that is part of a developing lower arm [Automatically generated definition].") AnnotationAssertion( "EHDAA2:0000555") AnnotationAssertion( "EHDAA:4176") AnnotationAssertion( "EHDAA:6222") AnnotationAssertion( "EMAPA:17419") AnnotationAssertion( "VHOG:0000504") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003327") AnnotationAssertion(rdfs:label "mesenchyme of forearm") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (mesenchyme of footplate) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "Mesenchyme that is part of a footplate.") AnnotationAssertion(Annotation( "EMAPA"^^xsd:string) "We group two EMAPA classes here but these may need to be separated") AnnotationAssertion( "UBERON:0005260") AnnotationAssertion( "EHDAA2:0000549") AnnotationAssertion( "EHDAA:5149") AnnotationAssertion( "EHDAA:6172") AnnotationAssertion( "EMAPA:17252") AnnotationAssertion( "EMAPA:17488") AnnotationAssertion( "VHOG_RETIRED:0001055") AnnotationAssertion( "foot plate mesenchyme") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003328") AnnotationAssertion(rdfs:label "mesenchyme of footplate") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (submucosa of anal canal) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A submucosa that is part of an anal canal [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:27217") AnnotationAssertion( "EMAPA:27227") AnnotationAssertion( "EMAPA:27535") AnnotationAssertion( "FMA:85399") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "anal canal submucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "anal canal viewed anatomically submucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "anal region submucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "anatomical anal canal submucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "submucosa of anal canal viewed anatomically") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "submucosa of anal region") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "submucosa of anatomical anal canal") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003329") AnnotationAssertion(rdfs:label "submucosa of anal canal") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (submucosa of rectum) AnnotationAssertion(Annotation( "BTO:0002114") "The submucous layer of the wall of the rectum.") AnnotationAssertion( ) AnnotationAssertion( "BTO:0002114") AnnotationAssertion( "EMAPA:27083") AnnotationAssertion( "FMA:15034") AnnotationAssertion(Annotation( "FMA:15034") "rectal submucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "rectum submucosa") AnnotationAssertion(Annotation( "BTO:0002114") Annotation( ) "tela submucosa recti") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003330") AnnotationAssertion(rdfs:label "submucosa of rectum") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (submucosa of colon) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A submucosa that is part of a colon [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:27379") AnnotationAssertion( "FMA:14985") AnnotationAssertion( "MA:0003200") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "colon submucosa") AnnotationAssertion(Annotation( "FMA:14985") "colonic submucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "large bowel submucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "submucosa of large bowel") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003331") AnnotationAssertion(rdfs:label "submucosa of colon") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (submucosa of duodenum) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A submucosa that is part of a duodenum [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:27027") AnnotationAssertion( "EMAPA:27097") AnnotationAssertion( "EMAPA:27239") AnnotationAssertion( "FMA:14943") AnnotationAssertion( "MA:0003213") AnnotationAssertion(Annotation( "FMA:14943") "doudenal submucosa") AnnotationAssertion(Annotation( "FMA:14943") "duodenal submucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "duodenum submucosa") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003332") AnnotationAssertion(rdfs:label "submucosa of duodenum") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (submucosa of jejunum) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A submucosa that is part of a jejunum [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:27111") AnnotationAssertion( "FMA:14950") AnnotationAssertion(Annotation( "FMA:14950") "jejunal submucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "jejunum submucosa") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003333") AnnotationAssertion(rdfs:label "submucosa of jejunum") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (serosa of rectum) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A serous membrane that is part of a rectum [Automatically generated definition].") AnnotationAssertion( "EMAPA:27087") AnnotationAssertion( "FMA:15039") AnnotationAssertion(Annotation( "FMA:15039") "rectal serosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "rectum serosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "rectum serous membrane") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "serous membrane of rectum") AnnotationAssertion(Annotation( "FMA:15039") "visceral peritoneum of rectum") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003334") AnnotationAssertion(rdfs:label "serosa of rectum") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (serosa of colon) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A serous membrane that is part of a colon [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:27387") AnnotationAssertion( "FMA:14990") AnnotationAssertion( "MA:0003199") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "colon serosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "colon serous membrane") AnnotationAssertion(Annotation( "FMA:14990") "colonic serosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "large bowel serosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "large bowel serous membrane") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "serosa of large bowel") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "serous membrane of colon") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "serous membrane of large bowel") AnnotationAssertion(Annotation( "FMA:14990") "visceral peritoneum of colon") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003335") AnnotationAssertion(rdfs:label "serosa of colon") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (serosa of duodenum) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A serous membrane that is part of a duodenum [Automatically generated definition].") AnnotationAssertion( "1st part serosa, 2nd - 4th adventitia") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:27247") AnnotationAssertion( "FMA:14948") AnnotationAssertion( "MA:0003212") AnnotationAssertion(Annotation( "FMA:14948") "doudenal serosa") AnnotationAssertion(Annotation( "FMA:14948") "duodenal serosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "duodenum serosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "duodenum serous membrane") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "serous membrane of duodenum") AnnotationAssertion(Annotation( "FMA:14948") "visceral peritoneum of duodenum") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003336") AnnotationAssertion(rdfs:label "serosa of duodenum") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (serosa of jejunum) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A serous membrane that is part of a jejunum [Automatically generated definition].") AnnotationAssertion( "EMAPA:27115") AnnotationAssertion( "FMA:14955") AnnotationAssertion(Annotation( "FMA:14955") "jejunal serosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "jejunum serosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "jejunum serous membrane") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "serous membrane of jejunum") AnnotationAssertion(Annotation( "FMA:14955") "visceral peritoneum of jejunum") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003337") AnnotationAssertion(rdfs:label "serosa of jejunum") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (ganglion of peripheral nervous system) AnnotationAssertion(Annotation( "BIRNLEX:2548") "A spatially aggregated collection of nerve cell bodies in the PNS, consisting of one or more subpopulations that share cell type, chemical phenotype, and connections. (CUMBO).") AnnotationAssertion(Annotation( "MA"^^xsd:string) "we follow MA in including separate classes for ganglion and peripheral nervous system, even though for vertebrates gangia are always in the PNS") AnnotationAssertion( "BIRNLEX:2548") AnnotationAssertion( "BTO:0001123") AnnotationAssertion( "EMAPA:32814") AnnotationAssertion( "MA:0001161") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "peripheral nervous system ganglion") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003338") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "ganglion of peripheral nervous system") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (ganglion of central nervous system) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A ganglion that is part of a central nervous system [Automatically generated definition].") AnnotationAssertion(Annotation( "FMA"^^xsd:string) "this has no subclasses in FMA. In EHDAA2 and EMAPA it has only the cranial ganglia") AnnotationAssertion( "EHDAA2:0000227") AnnotationAssertion( "EMAPA:16658") AnnotationAssertion( "FMA:83843") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "central nervous system ganglion") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "ganglion of neuraxis") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "neuraxis ganglion") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003339") AnnotationAssertion(rdfs:label "ganglion of central nervous system") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete urethra of urogenital sinus) AnnotationAssertion( "EMAPA:30901") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003340") AnnotationAssertion(rdfs:label "obsolete urethra of urogenital sinus") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete urethra of urinary system) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003341") AnnotationAssertion(rdfs:label "obsolete urethra of urinary system") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (mucosa of anal canal) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A mucosa that is part of an anal canal [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:27531") AnnotationAssertion( "FMA:74654") AnnotationAssertion( "NCIT:C60784") AnnotationAssertion(Annotation( "ncithesaurus:Anal_Mucosa") "UMLS:C0227414") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "anal canal mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "anal canal mucosa of organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "anal canal mucous membrane") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "anal canal organ mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "anal canal viewed anatomically mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "anal canal viewed anatomically mucosa of organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "anal canal viewed anatomically mucous membrane") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "anal canal viewed anatomically organ mucosa") AnnotationAssertion(Annotation( "FMA:74654") "anal mucosa") AnnotationAssertion(Annotation( "FMA:74654") "anal mucous membrane") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "anal region mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "anal region mucosa of organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "anal region mucous membrane") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "anal region organ mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "anatomical anal canal mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "anatomical anal canal mucosa of organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "anatomical anal canal mucous membrane") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "anatomical anal canal organ mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of anal canal viewed anatomically") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of anal region") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of anatomical anal canal") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of organ of anal canal") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of organ of anal canal viewed anatomically") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of organ of anal region") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of organ of anatomical anal canal") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucous membrane of anal canal") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucous membrane of anal canal viewed anatomically") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucous membrane of anal region") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucous membrane of anatomical anal canal") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "organ mucosa of anal canal") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "organ mucosa of anal canal viewed anatomically") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "organ mucosa of anal region") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "organ mucosa of anatomical anal canal") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003342") AnnotationAssertion(rdfs:label "mucosa of anal canal") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (mucosa of oral region) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A mucosa that is part of a oral opening [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:26937") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of oral opening") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of oral part of face") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of organ of oral opening") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of organ of oral part of face") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of organ of oral region") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of organ of subdivision of mouth") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of subdivision of mouth") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucous membrane of oral opening") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucous membrane of oral part of face") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucous membrane of oral region") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucous membrane of subdivision of mouth") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "oral opening mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "oral opening mucosa of organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "oral opening mucous membrane") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "oral opening organ mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "oral part of face mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "oral part of face mucosa of organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "oral part of face mucous membrane") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "oral part of face organ mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "oral region mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "oral region mucosa of organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "oral region mucous membrane") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "oral region organ mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "organ mucosa of oral opening") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "organ mucosa of oral part of face") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "organ mucosa of oral region") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "organ mucosa of subdivision of mouth") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "subdivision of mouth mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "subdivision of mouth mucosa of organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "subdivision of mouth mucous membrane") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "subdivision of mouth organ mucosa") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003343") AnnotationAssertion(rdfs:label "mucosa of oral region") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (mucosa of rectum) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A mucosa that is part of a rectum [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( "CALOHA:TS-2107") AnnotationAssertion( "EMAPA:27081") AnnotationAssertion( "FMA:15033") AnnotationAssertion( "MA:0003218") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of organ of rectum") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucous membrane of rectum") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "organ mucosa of rectum") AnnotationAssertion(Annotation( "FMA:15033") "rectal mucosa") AnnotationAssertion(Annotation( "FMA:15033") "rectal mucous membrane") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "rectum mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "rectum mucosa of organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "rectum mucous membrane") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "rectum organ mucosa") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003346") AnnotationAssertion(rdfs:label "mucosa of rectum") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (epithelium of mucosa) AnnotationAssertion(Annotation( "BTO:0003752") "A layer of epithelial cells on the surface of the mucosa.") AnnotationAssertion( "BTO:0003752") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0003752") "lamina epithelialis mucosa") AnnotationAssertion(Annotation( "BTO:0003752") "lamina epithelialis mucosae") AnnotationAssertion( "UBERON:0003350") AnnotationAssertion(rdfs:comment "lies on top of lamina propria") AnnotationAssertion(rdfs:label "epithelium of mucosa") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pharyngeal epithelium) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An epithelium that is part of a pharynx [Automatically generated definition].") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0001174") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "Epithelium lining the pharynx consisting largely of simple columnar epithelium with a short segment (1mm) of stratified squamous epithelium on the ventral side. Chen et al, 2007.[TAO]") AnnotationAssertion( "BSA:0000112") AnnotationAssertion( "BTO:0005240") AnnotationAssertion( "EMAPA:16708") AnnotationAssertion( "MA:0002725") AnnotationAssertion( "RETIRED_EHDAA2:0001460") AnnotationAssertion( "TAO:0001174") AnnotationAssertion( "XAO:0003202") AnnotationAssertion( "ZFA:0001174") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelial tissue of pharynx") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelium of pharynx") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "pharynx epithelial tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "pharynx epithelium") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003351") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "pharyngeal epithelium") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "ZFA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "ZFA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (epithelium of midgut) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An epithelium that is part of a midgut.") AnnotationAssertion( "BTO:0005053") AnnotationAssertion( "EHDAA2:0001195") AnnotationAssertion( "EMAPA:16569") AnnotationAssertion( "MA:0003205") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelial tissue of midgut") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "midgut epithelial tissue") AnnotationAssertion(Annotation( "BTO:0005053") "midgut epithelium") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "midgut epithelium") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003352") AnnotationAssertion(rdfs:label "epithelium of midgut") SubClassOf( ) SubClassOf(Annotation( "BTO"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (epithelium of hindgut) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An epithelium that is part of a hindgut [Automatically generated definition].") AnnotationAssertion( "EHDAA2:0000782") AnnotationAssertion( "EMAPA:16717") AnnotationAssertion( "MA:0003206") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelial tissue of hindgut") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "hindgut epithelial tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "hindgut epithelium") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003353") AnnotationAssertion(rdfs:label "epithelium of hindgut") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (epithelium of rectum) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An epithelium that is part of a rectum [Automatically generated definition].") AnnotationAssertion( "CALOHA:TS-2066") AnnotationAssertion( "EHDAA2:0001594") AnnotationAssertion( "EMAPA:17898") AnnotationAssertion( "FMA:17510") AnnotationAssertion( "MA:0003219") AnnotationAssertion( "VHOG:0001037") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelial tissue of rectum") AnnotationAssertion(Annotation( "FMA:17510") "rectal epithelium") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "rectum epithelial tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "rectum epithelium") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003354") AnnotationAssertion(rdfs:label "epithelium of rectum") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (epithelium of incisor) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An epithelium that is part of a incisor tooth [Automatically generated definition].") AnnotationAssertion( "EMAPA:32890") AnnotationAssertion( "MA:0003223") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelial tissue of incisor") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelial tissue of incisor tooth") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelium of incisor tooth") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "incisor epithelial tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "incisor epithelium") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "incisor tooth epithelial tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "incisor tooth epithelium") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003355") AnnotationAssertion(rdfs:label "epithelium of incisor") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (epithelium of nasal septum) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An epithelium that is part of a nasal septum [Automatically generated definition].") AnnotationAssertion( "EMAPA:18442") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelial tissue of nasal septum") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "nasal septum epithelial tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "nasal septum epithelium") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003356") AnnotationAssertion(rdfs:label "epithelium of nasal septum") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (epithelium of tongue) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An epithelium that is part of a tongue [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( "BTO:0000992") AnnotationAssertion( "CALOHA:TS-1051") AnnotationAssertion( "EHDAA2:0004598") AnnotationAssertion( "EMAPA:17881") AnnotationAssertion( "FMA:284658") AnnotationAssertion( "MA:0001592") AnnotationAssertion( "NCIT:C49300") AnnotationAssertion(Annotation( "ncithesaurus:Tongue_Epithelium") "UMLS:C1710436") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelial tissue of tongue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "tongue epithelial tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "tongue epithelium") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0000992") "lingual epithelium") AnnotationAssertion( "UBERON:0003357") AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "examples: tongue squamous epithelium, keratined, non-keratinized and parakeratinized epithelium, as well as gustatory epithelium. Note that not all these subtypes are named in individual anatomy ontologies.") AnnotationAssertion(rdfs:label "epithelium of tongue") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (epithelium of soft palate) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An epithelium that is part of a soft palate [Automatically generated definition].") AnnotationAssertion( "EMAPA:18950") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelial tissue of soft palate") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "soft palate epithelial tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "soft palate epithelium") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003358") AnnotationAssertion(rdfs:label "epithelium of soft palate") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (epithelium of submandibular gland) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An epithelium that is part of a submandibular gland [Automatically generated definition].") AnnotationAssertion( "BTO:0004557") AnnotationAssertion( "EMAPA:18813") AnnotationAssertion( "VHOG:0000989") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelial tissue of submandibular gland") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "submandibular gland epithelial tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "submandibular gland epithelium") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0004557") "submandibular duct epithelium") AnnotationAssertion(Annotation( "BTO:0004557") "submandibular gland duct epithelium") AnnotationAssertion(Annotation( "EMAPA:18813") "submaxillary gland epithelium") AnnotationAssertion( "UBERON:0003359") AnnotationAssertion(rdfs:label "epithelium of submandibular gland") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (epithelium of parotid gland) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An epithelium that is part of a parotid gland [Automatically generated definition].") AnnotationAssertion( "BTO:0004555") AnnotationAssertion( "EMAPA:18538") AnnotationAssertion( "VHOG:0001434") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelial tissue of parotid gland") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelium of parotid") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelium of parotid gland") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "parotid epithelial tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "parotid epithelium") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "parotid gland epithelial tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "parotid gland epithelium") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0004555") "parotid gland duct epithelium") AnnotationAssertion( "UBERON:0003360") AnnotationAssertion(rdfs:label "epithelium of parotid gland") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (epithelium of sublingual gland) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An epithelium that is part of a sublingual gland [Automatically generated definition].") AnnotationAssertion( "BTO:0004559") AnnotationAssertion( "EMAPA:18810") AnnotationAssertion( "VHOG:0001098") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "Rivinus'gland epithelial tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "Rivinus'gland epithelium") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "ductus sublingualis epithelial tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "ductus sublingualis epithelium") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelial tissue of Rivinus'gland") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelial tissue of ductus sublingualis") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelial tissue of sublingual gland") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelium of Rivinus'gland") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelium of ductus sublingualis") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "sublingual gland epithelial tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "sublingual gland epithelium") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0004559") "sublingual duct epithelium") AnnotationAssertion(Annotation( "BTO:0004559") "sublingual gland duct epithelium") AnnotationAssertion( "UBERON:0003361") AnnotationAssertion(rdfs:label "epithelium of sublingual gland") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (epithelium of endolymphatic duct) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An epithelium that is part of a endolymphatic duct [Automatically generated definition].") AnnotationAssertion( "EMAPA:18582") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "endolymphatic duct epithelial tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "endolymphatic duct epithelium") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelial tissue of endolymphatic duct") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003362") AnnotationAssertion(rdfs:label "epithelium of endolymphatic duct") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (epithelium of ductus reuniens) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An epithelium that is part of a ductus reuniens [Automatically generated definition].") AnnotationAssertion( "EMAPA:17289") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "ductus reuniens epithelial tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "ductus reuniens epithelium") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelial tissue of ductus reuniens") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003363") AnnotationAssertion(rdfs:label "epithelium of ductus reuniens") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (epithelium of right lung) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An epithelium that is part of a right lung [Automatically generated definition].") AnnotationAssertion( "EMAPA:17663") AnnotationAssertion( "MA:0003132") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelial tissue of right lung") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "right lung epithelial tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "right lung epithelium") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003364") AnnotationAssertion(rdfs:label "epithelium of right lung") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (epithelium of left lung) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An epithelium that is part of a left lung [Automatically generated definition].") AnnotationAssertion( "EMAPA:17655") AnnotationAssertion( "MA:0003131") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelial tissue of left lung") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "left lung epithelial tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "left lung epithelium") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003365") AnnotationAssertion(rdfs:label "epithelium of left lung") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (epithelium of uterine horn) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An epithelium that is part of a uterine horn [Automatically generated definition].") AnnotationAssertion( "EMAPA:29030") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelial tissue of uterine horn") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "uterine horn epithelial tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "uterine horn epithelium") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003366") AnnotationAssertion(rdfs:label "epithelium of uterine horn") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (epithelium of vomeronasal organ) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An epithelium that is part of a vomeronasal organ [Automatically generated definition].") AnnotationAssertion( "TODO - add cell types") AnnotationAssertion( "EHDAA2:0004102") AnnotationAssertion( "EMAPA:18444") AnnotationAssertion( "FMA:301283") AnnotationAssertion( "MA:0001328") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "Jacobson's organ epithelial tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "Jacobson's organ epithelium") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelial tissue of Jacobson's organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelial tissue of vomeronasal organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelium of Jacobson's organ") AnnotationAssertion(Annotation( "EHDAA2:0004102") "vomeronasal epithelium") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "vomeronasal organ epithelial tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "vomeronasal organ epithelium") AnnotationAssertion(Annotation( "MA:0001328") "vomeronasal organ sensory epithelium") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003367") AnnotationAssertion(rdfs:label "epithelium of vomeronasal organ") SubClassOf(Annotation( "EHDAA2"^^xsd:string) ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (epithelium of hard palate) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An epithelium that is part of a hard palate [Automatically generated definition].") AnnotationAssertion( "EMAPA:18953") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelial tissue of hard palate") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "hard palate epithelial tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "hard palate epithelium") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003368") AnnotationAssertion(rdfs:label "epithelium of hard palate") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (fossa ovalis of heart) AnnotationAssertion(Annotation( ) "Found in the right atrium of the heart, the fossa ovalis is an embryonic remnant of the foramen ovale, which normally closes shortly after birth. In a heart specimen of a neonate, the fossa ovalis is translucent, but later in life the membrane thickens.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:9246") AnnotationAssertion(Annotation( "FMA:9246") "fossa ovalis") AnnotationAssertion(Annotation( "FMA:9246") "oval fossa") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003369") AnnotationAssertion(rdfs:label "fossa ovalis of heart") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "Wikipedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (pelvic appendage bud ectoderm) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An unilaminar epithelium that surrounds a pelvic appendage bud.") AnnotationAssertion( "UBERON:0005232") AnnotationAssertion( "EHDAA2:0001034") AnnotationAssertion( "EMAPA:16780") AnnotationAssertion( "VHOG:0001048") AnnotationAssertion(Annotation( "VHOG:0001048") "hindlimb ectoderm") AnnotationAssertion(Annotation( "EMAPA:16780") Annotation( ) "hindlimb bud ectoderm") AnnotationAssertion(Annotation( ) "hindlimb bud ectoderm") AnnotationAssertion(Annotation( "VHOG:0001048") Annotation( ) "hindlimb ectoderm") AnnotationAssertion(Annotation( "EHDAA2:0001034") Annotation( ) "lower limb bud ectoderm") AnnotationAssertion(Annotation( ) "pelvic fin bud ectoderm") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "leg ectoderm") AnnotationAssertion( "UBERON:0003371") AnnotationAssertion(rdfs:label "pelvic appendage bud ectoderm") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (pectoral appendage bud ectoderm) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An unilaminar epithelium that surrounds a pectoral appendage bud.") AnnotationAssertion( "UBERON:0005231") AnnotationAssertion( "UBERON:0005663") AnnotationAssertion( "EHDAA2:0002134") AnnotationAssertion( "EMAPA:16407") AnnotationAssertion( "VHOG:0001047") AnnotationAssertion(Annotation( "EMAPA:16407") Annotation( ) "forelimb bud ectoderm") AnnotationAssertion(Annotation( ) "forelimb bud ectoderm") AnnotationAssertion(Annotation( "VHOG:0001047") Annotation( ) "forelimb ectoderm") AnnotationAssertion(Annotation( ) "pectoral fin bud ectoderm") AnnotationAssertion(Annotation( "EHDAA2:0002134") Annotation( ) "upper limb bud ectoderm") AnnotationAssertion(Annotation( "Geisha:syn") Annotation( "NCBITaxon:8782"^^xsd:string) Annotation( ) "wing ectoderm") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "arm ectoderm") AnnotationAssertion( "UBERON:0003372") AnnotationAssertion(rdfs:label "pectoral appendage bud ectoderm") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (ectoderm of footplate) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An ectoderm that is part of a footplate.") AnnotationAssertion( "EMAPA:17250") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003373") AnnotationAssertion(rdfs:label "ectoderm of footplate") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (chorionic ectoderm) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An extraembryonic structure that develops_from a ectoderm and is part of a chorion.") AnnotationAssertion( "BTO:0005145") AnnotationAssertion( "EMAPA:16113") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "chorion ectoderm") AnnotationAssertion( "uberon") AnnotationAssertion( "chorion epithelium") AnnotationAssertion(Annotation( "BTO:0005145") "chorionic epithelium") AnnotationAssertion( "UBERON:0003374") AnnotationAssertion(rdfs:label "chorionic ectoderm") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "ISBN:0073040584"^^xsd:string) ObjectSomeValuesFrom( )) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (cardiac muscle of auricular region) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A cardiac muscle tissue that is part of a atrium auricular region.") AnnotationAssertion( "EMAPA:36056") AnnotationAssertion( "FMA:84279") AnnotationAssertion(Annotation( "EMAPA:36056") "atrium auricular region cardiac muscle") AnnotationAssertion( "auricular region heart muscle") AnnotationAssertion(Annotation( "FMA:84279") "cardiac muscle tissue of auricle") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003378") AnnotationAssertion(rdfs:label "cardiac muscle of auricular region") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (cardiac muscle of right atrium) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A portion of cardiac muscle tissue that is part of a right atrium [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0004155") AnnotationAssertion( "EMAPA:17326") AnnotationAssertion( "FMA:7282") AnnotationAssertion( "VHOG:0001227") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "cardiac muscle of cardiac right atrium") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "cardiac muscle of heart right atrium") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "cardiac muscle tissue of heart right atrium") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "cardiac muscle tissue of right atrium") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "cardiac muscle tissue of right atrium of heart") AnnotationAssertion( "myocardium of right atrium") AnnotationAssertion(Annotation( "EHDAA2:0004155") "right atrium heart muscle") AnnotationAssertion(Annotation( "VHOG:0001227") "right atrium myocardium") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "textus muscularis of myocardium of right atrium") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "textus muscularis of myocardium of right atrium of heart") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "textus muscularis of myocardium of right cardiac atrium") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003379") AnnotationAssertion(rdfs:label "cardiac muscle of right atrium") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (cardiac muscle of left atrium) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A portion of cardiac muscle tissue that is part of a left atrium [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0004154") AnnotationAssertion( "EMAPA:17320") AnnotationAssertion( "FMA:7285") AnnotationAssertion( "VHOG:0001225") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "cardiac left atrium cardiac muscle") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "cardiac left atrium cardiac muscle tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "cardiac muscle of cardiac left atrium") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "cardiac muscle of heart left atrium") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "cardiac muscle of left atrium of heart") AnnotationAssertion(Annotation( "EHDAA2:0004154") "left atrium heart muscle") AnnotationAssertion(Annotation( "VHOG:0001225") "left atrium myocardium") AnnotationAssertion( "myocardium of left atrium") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "textus muscularis of myocardium of cardiac left atrium") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "textus muscularis of myocardium of heart left atrium") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "textus muscularis of myocardium of left atrium") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "textus muscularis of myocardium of left atrium of heart") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "textus muscularis of myocardium of left cardiac atrium") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003380") AnnotationAssertion(rdfs:label "cardiac muscle of left atrium") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (cardiac muscle of right ventricle) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A portion of cardiac muscle tissue that is part of a right ventricle [Automatically generated definition].") AnnotationAssertion( "EMAPA:17342") AnnotationAssertion( "FMA:83452") AnnotationAssertion( "VHOG:0001236") AnnotationAssertion(Annotation( "FMA:83452") "cardiac muscle tissue of right ventricle") AnnotationAssertion(Annotation( "GO:0003221") "right ventricular cardiac muscle tissue") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "VHOG:0001236") "right ventricle cardiac muscle") AnnotationAssertion( "UBERON:0003381") AnnotationAssertion(rdfs:label "cardiac muscle of right ventricle") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (cardiac muscle of left ventricle) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A portion of cardiac muscle tissue that is part of a left ventricle [Automatically generated definition].") AnnotationAssertion( "EMAPA:17339") AnnotationAssertion( "FMA:83453") AnnotationAssertion( "VHOG:0001234") AnnotationAssertion(Annotation( "FMA:83453") "cardiac muscle tissue of left ventricle") AnnotationAssertion(Annotation( "GO:0003220") "left ventricular cardiac muscle tissue") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "VHOG:0001234") "left ventricle cardiac muscle") AnnotationAssertion( "UBERON:0003382") AnnotationAssertion(rdfs:label "cardiac muscle of left ventricle") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (cardiac muscle tissue of interventricular septum) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A portion of cardiac muscle tissue that is part of an interventricular septum [Automatically generated definition].") AnnotationAssertion( "EHDAA2:0004158") AnnotationAssertion( "EMAPA:17335") AnnotationAssertion( "FMA:84084") AnnotationAssertion( "VHOG:0000999") AnnotationAssertion( "cardiac muscle of interventricular septum") AnnotationAssertion(Annotation( "FMA:84084") "cardiac muscle tissue of interventricular septum") AnnotationAssertion(Annotation( "VHOG:0000999") "interventricular septum cardiac muscle") AnnotationAssertion(Annotation( "EHDAA2:0004158") "interventricular septum heart muscle") AnnotationAssertion(Annotation( "VHOG:0000999") "interventricular septum myocardium") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "interventricular septum muscle") AnnotationAssertion( "UBERON:0003383") AnnotationAssertion(rdfs:label "cardiac muscle tissue of interventricular septum") SubClassOf( ) SubClassOf( ) # Class: (skeletal muscle tissue of pharynx) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A portion of skeletal muscle tissue that is part of a pharynx [Automatically generated definition].") AnnotationAssertion( "EMAPA:18963") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "pharynx skeletal muscle") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "pharynx skeletal muscle tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "skeletal muscle tissue of pharynx") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003384") AnnotationAssertion(rdfs:label "skeletal muscle tissue of pharynx") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete skeletal muscle of mesenchyme) AnnotationAssertion( "EMAPA:19107") AnnotationAssertion( "EMAPA:19144") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003385") AnnotationAssertion(rdfs:label "obsolete skeletal muscle of mesenchyme") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (smooth muscle of eye) AnnotationAssertion(Annotation( "MGI:cwg"^^xsd:string) Annotation( "MP:0005247") "Any of the striated muscles that move the eye and include: superior rectus, inferior rectus, medial rectus, lateral rectus, superior oblique, inferior oblique, retractor bulbi.") AnnotationAssertion( "Not clear if we need this and intra-ocular muscle. See issue #331. MA includes ciliary and iris smooth muscle") AnnotationAssertion( "EMAPA:18807") AnnotationAssertion( "MA:0001268") AnnotationAssertion(Annotation( "MA:0001268") "ocular smooth muscle") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003386") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "smooth muscle of eye") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (smooth muscle of trachea) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A portion of smooth muscle tissue that is part of a trachea [Automatically generated definition].") AnnotationAssertion( "UBERON:0004244") AnnotationAssertion( ) AnnotationAssertion( "BTO:0001391") AnnotationAssertion( "EMAPA:19192") AnnotationAssertion( "FMA:262010") AnnotationAssertion( "MA:0001863") AnnotationAssertion( "NCIT:C49306") AnnotationAssertion(Annotation( "ncithesaurus:Trachea_Smooth_Muscle_Tissue") "UMLS:C1710458") AnnotationAssertion(Annotation( "MA:0001863") "trachea smooth muscle") AnnotationAssertion(Annotation( "BTO:0001391") "tracheal smooth muscle") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003387") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "smooth muscle of trachea") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (mesothelium of pericardial cavity) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A mesothelium that is part of a pericardium [Automatically generated definition].") AnnotationAssertion( "RETIRED_EHDAA2:0001436") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "cavity of pericardial sac meso-epithelium") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "cavity of pericardial sac mesothelium") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "meso-epithelium of cavity of pericardial sac") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "meso-epithelium of pericardial cavity") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mesothelium of cavity of pericardial sac") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "pericardial cavity meso-epithelium") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "pericardial cavity mesothelium") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003388") AnnotationAssertion(rdfs:label "mesothelium of pericardial cavity") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (mesothelium of diaphragm) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A mesothelium that is part of a diaphragm [Automatically generated definition].") AnnotationAssertion( "EMAPA:18429") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "diaphragm meso-epithelium") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "diaphragm mesothelium") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "meso-epithelium of diaphragm") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "meso-epithelium of thoracic diaphragm") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mesothelium of thoracic diaphragm") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "thoracic diaphragm meso-epithelium") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "thoracic diaphragm mesothelium") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003389") AnnotationAssertion(rdfs:label "mesothelium of diaphragm") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (mesothelium of pleural cavity) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A mesothelium that is part of a pleural cavity [Automatically generated definition].") AnnotationAssertion( "BTO:0003155") AnnotationAssertion( "EHDAA2:0001476") AnnotationAssertion( "EMAPA:16775") AnnotationAssertion( "FMA:18148") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "meso-epithelium of pleural cavity") AnnotationAssertion(Annotation( "FMA:18148") "mesothelium of pleura") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "pleural cavity meso-epithelium") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "pleural cavity mesothelium") AnnotationAssertion(Annotation( "EMAPA:16775") "pleural mesothelium") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "EMAPA:16775") "pleura") AnnotationAssertion( "UBERON:0003390") AnnotationAssertion(rdfs:label "mesothelium of pleural cavity") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (mesentery of urinary system) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A mesentery that is part of a urinary system [Automatically generated definition].") AnnotationAssertion( "EMAPA:17367") AnnotationAssertion( "MA:0003233") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "excretory system mesentery") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mesentery of excretory system") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mesentery of renal system") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mesentery of systema urinaria") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "renal system mesentery") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "systema urinaria mesentery") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "urinary system mesentery") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003393") AnnotationAssertion(rdfs:label "mesentery of urinary system") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (mesentery of hindgut) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A mesentery that is part of a hindgut [Automatically generated definition].") AnnotationAssertion( "EMAPA:16718") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "hindgut mesentery") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003394") AnnotationAssertion(rdfs:label "mesentery of hindgut") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (mesentery of rectum) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A mesentery that is part of a rectum [Automatically generated definition].") AnnotationAssertion( "EMAPA:18664") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "rectum mesentery") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003395") AnnotationAssertion(rdfs:label "mesentery of rectum") SubClassOf( ) SubClassOf( ) # Class: (mesentery of colon) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A mesentery that is part of a colon [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:18942") AnnotationAssertion( "FMA:14645") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "colon mesentery") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "large bowel mesentery") AnnotationAssertion(Annotation( "FMA:14645") "large intestinal mesentery") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mesentery of large bowel") AnnotationAssertion(Annotation( "FMA:14645") "mesentery of large intestine") AnnotationAssertion(Annotation( ) "mesocolon") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003396") AnnotationAssertion(rdfs:label "mesentery of colon") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (mesentery of duodenum) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A mesentery that is part of a duodenum [Automatically generated definition].") AnnotationAssertion( "EMAPA:19081") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "duodenum mesentery") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003397") AnnotationAssertion(rdfs:label "mesentery of duodenum") SubClassOf( ) SubClassOf( ) # Class: (mesentery of jejunum) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A mesentery that is part of a jejunum [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:18670") AnnotationAssertion( "FMA:14651") AnnotationAssertion( "jejunal mesentery") AnnotationAssertion( "jejunum mesentery") AnnotationAssertion(Annotation( ) "mesojejunum") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003398") AnnotationAssertion(rdfs:label "mesentery of jejunum") SubClassOf( ) SubClassOf( ) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (skin of forearm) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A zone of skin that is part of a lower arm [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:18056") AnnotationAssertion( "FMA:38265") AnnotationAssertion( "MA:0000602") AnnotationAssertion(Annotation( "FMA:38265") "forearm skin") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "lower arm skin") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "lower segment of arm skin") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "skin of antebrachial region") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "skin of lower arm") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "skin of lower segment of arm") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "skin of zeugopod of arm") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003403") AnnotationAssertion(rdfs:label "skin of forearm") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lobar bronchus of right lung) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A lobar bronchus that is part of a right lung [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:17664") AnnotationAssertion( "MA:0003134") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "right lobar bronchus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "right lung lobar bronchus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "right lung secondary bronchus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "secondary bronchus of right lung") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003404") AnnotationAssertion(rdfs:label "lobar bronchus of right lung") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lobar bronchus of left lung) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A lobar bronchus that is part of a left lung [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:17388") AnnotationAssertion( "EMAPA:17656") AnnotationAssertion( "MA:0003133") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "left lobar bronchus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "left lung lobar bronchus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "left lung secondary bronchus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "secondary bronchus of left lung") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003405") AnnotationAssertion(rdfs:label "lobar bronchus of left lung") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (cartilage of respiratory system) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A cartilage element that is part of a respiratory system [Automatically generated definition].") AnnotationAssertion( "EMAPA:18694") AnnotationAssertion( "MA:0001818") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "apparatus respiratorius cartilage") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "cartilage of apparatus respiratorius") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "respiratory system cartilage") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003406") AnnotationAssertion(rdfs:label "cartilage of respiratory system") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (cartilage of nasal septum) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A cartilage that is part of a nasal septum [Automatically generated definition].") AnnotationAssertion( "EMAPA:25091") AnnotationAssertion( "FMA:59503") AnnotationAssertion( "MA:0003138") AnnotationAssertion(Annotation( "FMA:59503") "cartilago septal nasi") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "nasal septum cartilage") AnnotationAssertion(Annotation( "FMA:59503") "septal nasal cartilage") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003407") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "cartilage of nasal septum") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (gland of digestive tract) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A gland that is part of a digestive tract [Automatically generated definition].") AnnotationAssertion( "EMAPA:18815") AnnotationAssertion( "MA:0003202") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "digestive tract gland") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "gland of digestive tract") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "gland of lower gastrointestinal tract") AnnotationAssertion(Annotation( "MA:0003202") "gut gland") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "lower gastrointestinal tract gland") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003408") AnnotationAssertion(rdfs:label "gland of digestive tract") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (gland of tongue) AnnotationAssertion(Annotation( ) "Any of the mucous, serous, or mixed glands that empty their secretions onto the surface of the tongue.") AnnotationAssertion( "EMAPA:25097") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "lingual gland") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "tongue gland") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003409") AnnotationAssertion(rdfs:label "gland of tongue") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (oropharyngeal gland) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A gland that is part of a oropharynx [Automatically generated definition].") AnnotationAssertion( "EMAPA:25095") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "gland of oral part of pharynx") AnnotationAssertion(Annotation( "EMAPA:25095") "gland of oropharynx") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "oral part of pharynx gland") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "oropharynx gland") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003410") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "oropharyngeal gland") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (pelvic appendage bud mesenchyme) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "Mesenchyme that is part of a pelvic appendage bud.") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0001386") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "Mesoderm part of pelvic fin bud.[TAO]") AnnotationAssertion( "EHDAA2:0001035") AnnotationAssertion( "EMAPA:16781") AnnotationAssertion( "TAO:0001386") AnnotationAssertion( "ZFA:0001386") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "leg mesenchyme") AnnotationAssertion(Annotation( "EHDAA2:0001035") "lower limb bud mesenchyme") AnnotationAssertion(Annotation( "EMAPA:16781") Annotation( ) "hindlimb bud mesenchyme") AnnotationAssertion(Annotation( "ZFA:0001386") Annotation( ) "mesoderm pelvic fin bud") AnnotationAssertion(Annotation( ) "pelvic fin bud mesenchyme") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003412") AnnotationAssertion(rdfs:label "pelvic appendage bud mesenchyme") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pectoral appendage bud mesenchyme) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "Mesenchyme that is part of a pectoral appendage bud.") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0000789") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "Mesoderm that is part of the pectoral fin bud.[TAO]") AnnotationAssertion( "UBERON:0005703") AnnotationAssertion( "EHDAA2:0002135") AnnotationAssertion( "EHDAA:1703") AnnotationAssertion( "EMAPA:16408") AnnotationAssertion( "TAO:0000789") AnnotationAssertion( "ZFA:0000789") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "arm mesenchyme") AnnotationAssertion(Annotation( "EMAPA:16408") Annotation( ) "forelimb bud mesenchyme") AnnotationAssertion(Annotation( "ZFA:0000789") Annotation( ) "mesoderm pectoral fin bud") AnnotationAssertion(Annotation( ) "pectoral fin bud mesenchyme") AnnotationAssertion(Annotation( "EHDAA2:0002135") "upper limb bud mesenchyme") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "wing mesenchyme") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003413") AnnotationAssertion(rdfs:label "pectoral appendage bud mesenchyme") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (mesenchyme of mandible) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "Mesenchyme that is part of a developing mandible [Automatically generated definition].") AnnotationAssertion( "EMAPA:17912") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bone of lower jaw mesenchyme") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bone of ventral mandibular arch mesenchyme") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bone organ of lower jaw mesenchyme") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bone organ of ventral mandibular arch mesenchyme") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "lower jaw bone mesenchyme") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "lower jaw bone organ mesenchyme") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mandible mesenchyme") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mandibulla mesenchyme") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mesenchyme of bone of lower jaw") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mesenchyme of bone of ventral mandibular arch") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mesenchyme of bone organ of lower jaw") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mesenchyme of bone organ of ventral mandibular arch") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mesenchyme of lower jaw bone") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mesenchyme of lower jaw bone organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mesenchyme of mandibulla") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mesenchyme of ventral mandibular arch bone") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mesenchyme of ventral mandibular arch bone organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "ventral mandibular arch bone mesenchyme") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "ventral mandibular arch bone organ mesenchyme") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003414") AnnotationAssertion(rdfs:label "mesenchyme of mandible") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (mesenchyme of nasal septum) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "Mesenchyme that is part of a developing nasal septum [Automatically generated definition].") AnnotationAssertion( "EMAPA:18443") AnnotationAssertion( "FMA:312700") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "nasal septum mesenchyme") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003415") AnnotationAssertion(rdfs:label "mesenchyme of nasal septum") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (mesenchyme of tongue) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "Mesenchyme that is part of a developing tongue [Automatically generated definition].") AnnotationAssertion( "TODO - develops_from") AnnotationAssertion( "EHDAA2:0004614") AnnotationAssertion( "EMAPA:17882") AnnotationAssertion(Annotation( "EHDAA2:0004614") "tongue mesenchyme") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003416") AnnotationAssertion(rdfs:label "mesenchyme of tongue") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (mesenchyme of soft palate) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "Mesenchyme that is part of a developing soft palate [Automatically generated definition].") AnnotationAssertion( "EMAPA:18951") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "soft palate mesenchyme") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003417") AnnotationAssertion(rdfs:label "mesenchyme of soft palate") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (mesenchyme of submandibular gland) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "Mesenchyme that is part of a developing submandibular gland [Automatically generated definition].") AnnotationAssertion( "EMAPA:18814") AnnotationAssertion( "VHOG:0001110") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "submandibular gland mesenchyme") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "EMAPA:18814") "submaxillary gland mesenchyme") AnnotationAssertion( "UBERON:0003418") AnnotationAssertion(rdfs:label "mesenchyme of submandibular gland") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (mesenchyme of parotid) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "Mesenchyme that is part of a developing parotid gland [Automatically generated definition].") AnnotationAssertion( "EMAPA:18539") AnnotationAssertion( "VHOG:0001435") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mesenchyme of parotid gland") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "parotid gland mesenchyme") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "parotid mesenchyme") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003419") AnnotationAssertion(rdfs:label "mesenchyme of parotid") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (mesenchyme of sublingual gland) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "Mesenchyme that is part of a developing sublingual gland [Automatically generated definition].") AnnotationAssertion( "EMAPA:18811") AnnotationAssertion( "VHOG:0001106") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "Rivinus'gland mesenchyme") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "ductus sublingualis mesenchyme") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mesenchyme of Rivinus'gland") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mesenchyme of ductus sublingualis") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "sublingual gland mesenchyme") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003420") AnnotationAssertion(rdfs:label "mesenchyme of sublingual gland") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (mesenchyme of vomeronasal organ) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "Mesenchyme that is part of a developing vomeronasal organ [Automatically generated definition].") AnnotationAssertion( "EHDAA2:0004103") AnnotationAssertion( "EMAPA:18445") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "Jacobson's organ mesenchyme") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mesenchyme of Jacobson's organ") AnnotationAssertion(Annotation( "EHDAA2:0004103") "vomeronasal mesenchyme") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "vomeronasal organ mesenchyme") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003421") AnnotationAssertion(rdfs:label "mesenchyme of vomeronasal organ") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (mesenchyme of umbilical cord) AnnotationAssertion(Annotation( ) "A gelatinous substance within the umbilical cord, largely made up of mucopolysaccharides (hyaluronic acid and chondroitin sulfate). It also contains some fibroblasts and macrophages. It is derived from Extra Embryonic Mesoderm[WP].") AnnotationAssertion( "TODO - check") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:26127") AnnotationAssertion( "EMAPA:35925") AnnotationAssertion(Annotation( "EMAPA:26127") "Wharton's jelly") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "umbilical cord mesenchyme") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003422") AnnotationAssertion(rdfs:label "mesenchyme of umbilical cord") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (mesenchyme of hard palate) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "Mesenchyme that is part of a developing hard palate [Automatically generated definition].") AnnotationAssertion( "EMAPA:18954") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "hard palate mesenchyme") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003424") AnnotationAssertion(rdfs:label "mesenchyme of hard palate") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (renal lymph node) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A lymph node that is located in a kidney [Automatically generated definition].") AnnotationAssertion(Annotation( ) Annotation( "NCBITaxon:10090") "Dorsal to the ipsilateral kidney nearby the renal blood vessels, caudal to the adrenal gland") AnnotationAssertion( ) AnnotationAssertion( "FMA:276799") AnnotationAssertion( "MA:0002882") AnnotationAssertion( "NCIT:C77646") AnnotationAssertion(Annotation( "ncithesaurus:Renal_Lymph_Node") "UMLS:C2699031") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "kidney lymph node") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "lymph node of kidney") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003425") AnnotationAssertion(rdfs:label "renal lymph node") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (dermis adipose tissue) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An adipose tissue that is part of a dermis [Automatically generated definition].") AnnotationAssertion( "MA:0000798") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "adipose tissue of dermis") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "dermis fat tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "dermis fatty tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "fat tissue of dermis") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "fatty tissue of dermis") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003426") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "dermis adipose tissue") SubClassOf( ) SubClassOf( ) # Class: (abdominal fat pad) AnnotationAssertion(Annotation( "MP:0000010") "The encapsulated adipose tissue in the abdomen.") AnnotationAssertion( "EMAPA:36499") AnnotationAssertion( "MA:0000472") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "abdomen fat pad") AnnotationAssertion( "abdominal fat depot") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "fat pad of abdomen") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003427") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "abdominal fat pad") SubClassOf( ) SubClassOf( ) # Class: (gonadal fat pad) AnnotationAssertion(Annotation( "MP:0005335") "The encapsulated adipose tissue associated with the ovaries or testes.") AnnotationAssertion( "consider change relationship from part_of") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0000157") Annotation( "AAO"^^xsd:string) Annotation( "AAO:BJB"^^xsd:string) "Anatomical structure associated with the gonads which vary in form among amphibians but are primarily composed of adipose tissue and are thought to be a source of nutrients for the gonads.[AAO]") AnnotationAssertion( "we place the amphibian structures here as their definitions state a gonadal association.") AnnotationAssertion( "AAO:0000157") AnnotationAssertion( "EFO:0000811") AnnotationAssertion( "MA:0002547") AnnotationAssertion( "XAO:0003050") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "fat pad of gonad") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "fat pad of gonads") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "gonad fat pad") AnnotationAssertion( "gonad-associated fat pad") AnnotationAssertion( "gonadal fat depot") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "gonadal fat pad") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003428") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "gonadal fat pad") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (abdomen nerve) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A nerve that is part of an abdomen [Automatically generated definition].") AnnotationAssertion( "MA:0000521") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "nerve of abdomen") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003429") AnnotationAssertion(rdfs:label "abdomen nerve") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (neck nerve) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A nerve that is part of a neck [Automatically generated definition].") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37263") AnnotationAssertion( "MA:0000588") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "neck (volume) nerve") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "nerve of neck") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "nerve of neck (volume)") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003430") AnnotationAssertion(rdfs:label "neck nerve") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (leg nerve) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A nerve that is part of a leg [Automatically generated definition].") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37343") AnnotationAssertion( "MA:0000673") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "nerve of leg") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003431") AnnotationAssertion(rdfs:label "leg nerve") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (chest nerve) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A nerve that is part of a chest [Automatically generated definition].") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37266") AnnotationAssertion( "MA:0000551") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "anterior thoracic region nerve") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "anterolateral part of thorax nerve") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "front of thorax nerve") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "nerve of anterior thoracic region") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "nerve of anterolateral part of thorax") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "nerve of chest") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "nerve of front of thorax") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003432") AnnotationAssertion(rdfs:label "chest nerve") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (arm nerve) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A nerve that is part of an arm [Automatically generated definition].") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37336") AnnotationAssertion( "MA:0000595") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "brachial region nerve") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "nerve of arm") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "nerve of brachial region") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003433") AnnotationAssertion(rdfs:label "arm nerve") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (wrist nerve) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A nerve that is part of a wrist [Automatically generated definition].") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37339") AnnotationAssertion( "MA:0000637") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "carpal region nerve") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "nerve of carpal region") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "nerve of wrist") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003434") AnnotationAssertion(rdfs:label "wrist nerve") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pedal digit nerve) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A nerve that is part of a toe [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37348") AnnotationAssertion( "MA:0000649") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "digit of foot nerve") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "digit of terminal segment of free lower limb nerve") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "digitus pedis nerve") AnnotationAssertion(Annotation( "MA:0000649") "foot digit nerve") AnnotationAssertion(Annotation( "OBOL:accepted"^^xsd:string) "hind limb digit nerve") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "nerve of digit of foot") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "nerve of digit of terminal segment of free lower limb") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "nerve of digitus pedis") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "nerve of foot digit") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "nerve of terminal segment of free lower limb digit") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "nerve of toe") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "terminal segment of free lower limb digit nerve") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "toe nerve") AnnotationAssertion(Annotation( "NCBITaxon:9606"^^xsd:string) Annotation( "OBOL:accepted"^^xsd:string) Annotation( ) "foot digit nerve") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003435") AnnotationAssertion(rdfs:label "pedal digit nerve") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (shoulder nerve) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A nerve that is part of a shoulder [Automatically generated definition].") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37335") AnnotationAssertion( "MA:0000634") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "nerve of shoulder") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003436") AnnotationAssertion(rdfs:label "shoulder nerve") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (eyelid nerve) AnnotationAssertion(Annotation( ) "A nerve that innervates an eyelid.") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37535") AnnotationAssertion( "MA:0001255") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "blepharon nerve") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "nerve of blepharon") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "nerve of eyelid") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "palpebral nerve") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003437") AnnotationAssertion(rdfs:label "eyelid nerve") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (iris nerve) AnnotationAssertion(Annotation( "UBERON:cjm"^^xsd:string) "Any nerve that innervates the iris.") AnnotationAssertion( "added for consistency with mouse ontologies. The term 'ciliary nerve' is usually used to denote either of the two nerves (with different origins) that innervate the iris, as well as ciliary muscles and cornea") AnnotationAssertion( "EMAPA:35449") AnnotationAssertion( "MA:0001291") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "nerve of iris") AnnotationAssertion( "ciliary nerve") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003438") AnnotationAssertion(rdfs:label "iris nerve") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (nerve of trunk region) AnnotationAssertion(Annotation( ) "A nerve that is part of the trunk region of the body (not to be confused with a nerve trunk).") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37264") AnnotationAssertion( "MA:0000515") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "nerve of torso") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "nerve of trunk") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "torso nerve") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "MA:0000515") "trunk nerve") AnnotationAssertion( "UBERON:0003439") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "nerve of trunk region") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (limb nerve) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A nerve that is part of a limb [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37291") AnnotationAssertion( "MA:0000693") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "nerve of limb") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003440") AnnotationAssertion(rdfs:label "limb nerve") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (forelimb nerve) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A nerve that is part of a forelimb [Automatically generated definition].") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37334") AnnotationAssertion( "MA:0000616") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "fore limb nerve") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "nerve of fore limb") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "nerve of forelimb") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "nerve of superior member") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "nerve of upper extremity") AnnotationAssertion(Annotation( "NCBITaxon:8782"^^xsd:string) Annotation( "OBOL:automatic"^^xsd:string) Annotation( ) "wing nerve") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003441") AnnotationAssertion(rdfs:label "forelimb nerve") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (hindlimb nerve) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A nerve that is part of a hindlimb [Automatically generated definition].") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37342") AnnotationAssertion( "MA:0000664") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "hind limb nerve") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "nerve of hind limb") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "nerve of hindlimb") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "nerve of inferior member") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "nerve of lower extremity") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003442") AnnotationAssertion(rdfs:label "hindlimb nerve") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (thoracic cavity nerve) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A nerve that is located in a thoracic cavity [Automatically generated definition].") AnnotationAssertion( "consider merging with thoracic nerve. In MA the only subclass is the phrenic nerve, which arises from a cervical nerve") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37267") AnnotationAssertion( "MA:0000556") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "cavity of chest nerve") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "cavity of thorax nerve") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "chest cavity nerve") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "nerve of cavity of chest") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "nerve of cavity of thorax") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "nerve of chest cavity") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "nerve of pectoral cavity") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "nerve of thoracic cavity") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "pectoral cavity nerve") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003443") AnnotationAssertion(rdfs:label "thoracic cavity nerve") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pelvis nerve) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A nerve that is part of a pelvis [Automatically generated definition].") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37269") AnnotationAssertion( "MA:0000542") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "nerve of pelvis") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003444") AnnotationAssertion(rdfs:label "pelvis nerve") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pes nerve) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A nerve that is part of a foot [Automatically generated definition].") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37347") AnnotationAssertion( "MA:0000653") AnnotationAssertion(Annotation( "MA:0000653") "foot nerve") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "nerve of foot") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003445") AnnotationAssertion(rdfs:label "pes nerve") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (ankle nerve) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A nerve that is part of an ankle [Automatically generated definition].") AnnotationAssertion(Annotation( "FMA"^^xsd:string) "FMA placement dubious") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37346") AnnotationAssertion( "MA:0000640") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "nerve of ankle") AnnotationAssertion(Annotation( ) "tarsal region nerve") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:86901") "neural network of ankle") AnnotationAssertion( "UBERON:0003446") AnnotationAssertion(rdfs:label "ankle nerve") AnnotationAssertion(rdfs:seeAlso ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (digit nerve of manus) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A nerve that is part of a finger [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37341") AnnotationAssertion( "MA:0000625") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "digit of hand nerve") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "digit of terminal segment of free upper limb nerve") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "digitus manus nerve") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "finger nerve") AnnotationAssertion(Annotation( "MA:0000625") "hand digit nerve") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "nerve of digit of hand") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "nerve of digit of terminal segment of free upper limb") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "nerve of digitus manus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "nerve of finger") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "nerve of hand digit") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "nerve of terminal segment of free upper limb digit") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "terminal segment of free upper limb digit nerve") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003447") AnnotationAssertion(rdfs:label "digit nerve of manus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (manus nerve) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A nerve that is part of a manus [Automatically generated definition].") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37340") AnnotationAssertion( "MA:0000629") AnnotationAssertion(Annotation( "MA:0000629") "hand nerve") AnnotationAssertion(Annotation( "UBERON:cjm"^^xsd:string) "nerve of hand") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "nerve of manus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003448") AnnotationAssertion(rdfs:label "manus nerve") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (upper jaw incisor) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An incisor tooth that is part of a upper jaw [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0002121") AnnotationAssertion( "EMAPA:17939") AnnotationAssertion( "FMA:321754") AnnotationAssertion( "MA:0001601") AnnotationAssertion( "NCIT:C49794") AnnotationAssertion(Annotation( "ncithesaurus:Upper_Jaw_Incisor") "UMLS:C1710579") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "incisor of palatoquadrate arch") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "incisor of upper jaw") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "incisor tooth of palatoquadrate arch") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "incisor tooth of upper jaw") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "palatoquadrate arch incisor") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "palatoquadrate arch incisor tooth") AnnotationAssertion(Annotation( ) Annotation( "OBOL:automatic"^^xsd:string) "upper incisor") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "upper jaw incisor tooth") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:55712") "maxillary incisor tooth") AnnotationAssertion(Annotation( ) "premaxillary tooth") AnnotationAssertion( "UBERON:0003450") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "upper jaw incisor") SubClassOf( ) SubClassOf( ) # Class: (lower jaw incisor) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An incisor tooth that is part of a lower jaw [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( "BTO:0001942") AnnotationAssertion( "EHDAA2:0001021") AnnotationAssertion( "EMAPA:17918") AnnotationAssertion( "MA:0001600") AnnotationAssertion( "NCIT:C49583") AnnotationAssertion(Annotation( "ncithesaurus:Lower_Jaw_Incisor") "UMLS:C1708755") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "incisor of lower jaw") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "incisor of ventral mandibular arch") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "incisor tooth of lower jaw") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "incisor tooth of ventral mandibular arch") AnnotationAssertion(Annotation( ) Annotation( "OBOL:automatic"^^xsd:string) "lower incisor") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "lower jaw incisor tooth") AnnotationAssertion(Annotation( "BTO:0001942") "mandibular incisor") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "ventral mandibular arch incisor") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "ventral mandibular arch incisor tooth") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003451") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "lower jaw incisor") SubClassOf( ) SubClassOf( ) # Class: (trabecula carnea cardiac muscle tissue) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A portion of cardiac muscle tissue that is part of a trabecula carnea [Automatically generated definition].") AnnotationAssertion( "EMAPA:36573") AnnotationAssertion( "FMA:84428") AnnotationAssertion( "MA:0002833") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "cardiac muscle muscle tissue of trabecula carnea") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "cardiac muscle of trabecula carnea") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "cardiac muscle textus muscularis of trabecula carnea") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "cardiac muscle tissue of trabecula carnea") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "heart muscle muscle tissue of trabecula carnea") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "heart muscle textus muscularis of trabecula carnea") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "heart myocardium muscle tissue of trabecula carnea") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "heart myocardium textus muscularis of trabecula carnea") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "muscle of heart muscle tissue of trabecula carnea") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "muscle of heart textus muscularis of trabecula carnea") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "muscle tissue of cardiac muscle of trabecula carnea") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "muscle tissue of heart muscle of trabecula carnea") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "muscle tissue of heart myocardium of trabecula carnea") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "muscle tissue of muscle of heart of trabecula carnea") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "muscle tissue of myocardium of trabecula carnea") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "myocardium muscle tissue of trabecula carnea") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "myocardium textus muscularis of trabecula carnea") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "textus muscularis of cardiac muscle of trabecula carnea") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "textus muscularis of heart muscle of trabecula carnea") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "textus muscularis of heart myocardium of trabecula carnea") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "textus muscularis of muscle of heart of trabecula carnea") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "textus muscularis of myocardium of trabecula carnea") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "trabecula carnea cardiac muscle") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "trabecula carnea cardiac muscle muscle tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "trabecula carnea cardiac muscle textus muscularis") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "trabecula carnea heart muscle muscle tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "trabecula carnea heart muscle textus muscularis") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "trabecula carnea heart myocardium muscle tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "trabecula carnea heart myocardium textus muscularis") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "trabecula carnea muscle of heart muscle tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "trabecula carnea muscle of heart textus muscularis") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "trabecula carnea muscle tissue of cardiac muscle") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "trabecula carnea muscle tissue of heart muscle") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "trabecula carnea muscle tissue of heart myocardium") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "trabecula carnea muscle tissue of muscle of heart") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "trabecula carnea muscle tissue of myocardium") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "trabecula carnea myocardium muscle tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "trabecula carnea myocardium textus muscularis") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "trabecula carnea textus muscularis of cardiac muscle") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "trabecula carnea textus muscularis of heart muscle") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "trabecula carnea textus muscularis of heart myocardium") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "trabecula carnea textus muscularis of muscle of heart") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "trabecula carnea textus muscularis of myocardium") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003452") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "trabecula carnea cardiac muscle tissue") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (large intestine Peyer's patch) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A Peyer's patch that is part of a large intestine.") AnnotationAssertion( "requires expert attention") AnnotationAssertion( "EMAPA:35468") AnnotationAssertion( "FMA:15658") AnnotationAssertion( "MA:0001550") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "Peyer's patch of large intestine") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "large intestine Peyer's patch") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:15658") "solitary lymphatic follicle of large intestine") AnnotationAssertion(Annotation( "FMA:15658") "solitary lymphoid follicle of subdivision of large intestine") AnnotationAssertion( "UBERON:0003453") AnnotationAssertion(rdfs:label "large intestine Peyer's patch") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (small intestine Peyer's patch) AnnotationAssertion(Annotation( ) "Nodular lymphoid structures on the serosal surface of the small intestine.") AnnotationAssertion( "add subtypes for jejunum, ileum") AnnotationAssertion( ) AnnotationAssertion(Annotation( "FMA:15054") "Peyer's patch") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:35782") AnnotationAssertion( "FMA:15054") AnnotationAssertion( "MA:0001557") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "Peyer's patch of small bowel") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "Peyer's patch of small intestine") AnnotationAssertion(Annotation( "FMA:15054") "aggregated lymphoid follicle of small intestine") AnnotationAssertion(Annotation( "FMA:76466") Annotation( ) "noduli lymphoidei aggregati intestini tenuis") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "small bowel Peyer's patch") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "small intestine Peyer's patch") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003454") AnnotationAssertion(rdfs:label "small intestine Peyer's patch") SubClassOf( ) SubClassOf(Annotation( "ncithesaurus"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (inner renal medulla loop of Henle) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A loop of Henle that is part of a inner medulla of kidney [Automatically generated definition].") AnnotationAssertion( "EMAPA:28352") AnnotationAssertion( "MA:0002623") AnnotationAssertion(Annotation( "MA:0002623") "kidney inner medulla loop of Henle") AnnotationAssertion(Annotation( "EMAPA:28352") "loop of Henle, inner medullary portion") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003455") AnnotationAssertion(rdfs:label "inner renal medulla loop of Henle") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (respiratory system lymphatic vessel) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A lymphatic vessel that is part of a respiratory system [Automatically generated definition].") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37580") AnnotationAssertion( "MA:0001824") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "apparatus respiratorius lymph vessel") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "apparatus respiratorius lymphatic vessel") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "lymph vessel of apparatus respiratorius") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "lymph vessel of respiratory system") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "lymphatic vessel of apparatus respiratorius") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "lymphatic vessel of respiratory system") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "respiratory system lymph vessel") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003456") AnnotationAssertion(rdfs:label "respiratory system lymphatic vessel") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (head bone) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A bone that is part of a head [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:35996") AnnotationAssertion( "MA:0000576") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "adult head bone") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "adult head bone organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bone of adult head") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bone of head") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bone organ of adult head") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bone organ of head") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "head bone organ") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "craniofacial bone") AnnotationAssertion( "UBERON:0003457") AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "Different sources vary regarding which bones are craniofacial; e.g. hyoid bone") AnnotationAssertion(rdfs:label "head bone") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (neck bone) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A bone that is part of a neck [Automatically generated definition].") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37246") AnnotationAssertion( "MA:0000584") AnnotationAssertion( "OpenCyc:Mx4rvnpJSJwpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bone of neck") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bone of neck (volume)") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bone organ of neck") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bone organ of neck (volume)") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "neck (volume) bone") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "neck (volume) bone organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "neck bone organ") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003458") AnnotationAssertion(rdfs:label "neck bone") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (chest bone) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A bone that is part of a chest [Automatically generated definition].") AnnotationAssertion( "EMAPA:18025") AnnotationAssertion( "MA:0000547") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "anterior thoracic region bone") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "anterior thoracic region bone organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "anterolateral part of thorax bone") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "anterolateral part of thorax bone organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bone of anterior thoracic region") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bone of anterolateral part of thorax") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bone of chest") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bone of front of thorax") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bone organ of anterior thoracic region") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bone organ of anterolateral part of thorax") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bone organ of chest") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bone organ of front of thorax") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "chest bone organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "front of thorax bone") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "front of thorax bone organ") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003459") AnnotationAssertion(rdfs:label "chest bone") SubClassOf( ) SubClassOf( ) # Class: (arm bone) AnnotationAssertion(Annotation( ) "A bone that is part of the region of the forelimb that includes the zeugopod and stylopod. Examples: patella, femur, tibia.") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37303") AnnotationAssertion( "MA:0000592") AnnotationAssertion( "OpenCyc:Mx4rwKTXoJwpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "arm bone organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bone of arm") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bone organ of arm") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "GAID:178") "bone of upper extremity") AnnotationAssertion( "UBERON:0003460") AnnotationAssertion(rdfs:label "arm bone") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (shoulder bone) AnnotationAssertion(Annotation( ) "A bone that is connected via a shoulder joint (i.e. glenohumeral or acromioclavicular joints). The shoulder bones are the clavicle, scapula and humerus - but note that these are only considered to be shoulder bones when a true shoulder is present, as in most tetrapods.") AnnotationAssertion(Annotation( "MA"^^xsd:string) "this is a forelimb bone in MA, but this would lead to part-disjointness violations.") AnnotationAssertion( "MA:0000631") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bone of shoulder") AnnotationAssertion( "shoulder-articulating bone") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003461") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "shoulder bone") SubClassOf(Annotation( "UBERONREF:0000003") Annotation( "MA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) # Class: (facial bone) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A bone that is part of a facial skeleton [Automatically generated definition].") AnnotationAssertion( "test whether 'facial bone' is an exact synonym") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:19019") AnnotationAssertion( "EMAPA:35924") AnnotationAssertion( "MA:0001482") AnnotationAssertion( "MA:0003159") AnnotationAssertion( "NCIT:C63706") AnnotationAssertion(Annotation( "ncithesaurus:Facial_Bone") "UMLS:C0015455") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bone of facial skeleton") AnnotationAssertion(Annotation( "EMAPA:19019") "facial bone") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "facial skeleton bone") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bone of viscerocranium") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "viscerocranium bone") AnnotationAssertion( "UBERON:0003462") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "facial bone") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "MA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (trunk bone) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A bone that is part of a trunk [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:36583") AnnotationAssertion( "MA:0000512") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bone of torso") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bone of trunk") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bone organ of torso") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bone organ of trunk") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "torso bone") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "torso bone organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "trunk bone organ") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003463") AnnotationAssertion(rdfs:label "trunk bone") SubClassOf( ) SubClassOf( ) # Class: (hindlimb bone) AnnotationAssertion(Annotation( ) "A bone that is part of a hindlimb region. Examples: any pes phalanx, femur. Counter-examples: ischium, pubis (they are part of the pelvic girdle).") AnnotationAssertion(Annotation( "MA"^^xsd:string) "the MA class is actually bone of pelvic complex; in contrast the NCIT class excludes ilium etc") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EFO:0003842") AnnotationAssertion( "GAID:198") AnnotationAssertion( "NCIT:C12982") AnnotationAssertion(Annotation( "ncithesaurus:Bone_of_the_Lower_Extremity") "UMLS:C0448188") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bone of hind limb") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bone of hindlimb") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bone of inferior member") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bone of lower extremity") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bone organ of hind limb") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bone organ of hindlimb") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bone organ of lower extremity") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "hind limb bone") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "hind limb bone organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "hindlimb bone organ") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003464") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "hindlimb bone") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete chondrocranium bone) AnnotationAssertion(Annotation( "OBOL:accepted"^^xsd:string) "A bone that is part of a chondrocranium [Automatically generated definition].") AnnotationAssertion( "UBERON:0011164") AnnotationAssertion( "UBERON:0004762") AnnotationAssertion( "ZFA:0001544") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003465") AnnotationAssertion(rdfs:comment "Made obsolete because it conflated neuro and chondro-cranium; also ZFA:0001544 equivalent was made obsolete.") AnnotationAssertion(rdfs:label "obsolete chondrocranium bone") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (forelimb zeugopod bone) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A bone that is part of a lower arm [Automatically generated definition].") AnnotationAssertion( "EMAPA:35347") AnnotationAssertion( "MA:0000598") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "antebrachial region bone") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "antebrachial region bone organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "arm zeugopod bone") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "arm zeugopod bone organ") AnnotationAssertion(Annotation( "MA:0000598") "lower arm bone") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "zeugopod bone, forelimb") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "zeugopod bone, upper") AnnotationAssertion(Annotation( "NCBITaxon:8782"^^xsd:string) Annotation( "OBOL:automatic"^^xsd:string) Annotation( ) "wing zeugopod bone") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003466") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "forelimb zeugopod bone") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (sesamoid bone of gastrocnemius) AnnotationAssertion(Annotation( ) Annotation( ) Annotation( "MP:0009005") "A small sesamoid bone situated behind a condyle of the femur.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:35771") AnnotationAssertion( "FMA:281591") AnnotationAssertion( "MA:0001378") AnnotationAssertion( "galen:Fabella") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "gastrocnemius sesamoid bone") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "m. gastrocnemius sesamoid bone") AnnotationAssertion(Annotation( "NominaAnatomicaVeterinaria:2005"^^xsd:string) Annotation( ) "ossa sessamoidea m. gastrocnemii") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "sesamoid bone of m. gastrocnemius") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "MA:0001378") Annotation( "NominaAnatomicaVeterinaria:2005"^^xsd:string) "fabella") AnnotationAssertion( "UBERON:0003467") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "sesamoid bone of gastrocnemius") SubClassOf(Annotation( "MA"^^xsd:string) ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (ureteric segment of renal artery) AnnotationAssertion(Annotation( ) "The ureteral branches of renal artery are small branches which supply the ureter.") AnnotationAssertion(Annotation( "MA:0002074") "ureteric artery") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37676") AnnotationAssertion( "FMA:70491") AnnotationAssertion( "MA:0002074") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003468") AnnotationAssertion(rdfs:label "ureteric segment of renal artery") SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (respiratory system artery) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An artery that is part of a respiratory system [Automatically generated definition].") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37569") AnnotationAssertion( "MA:0001804") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003469") AnnotationAssertion(rdfs:label "respiratory system artery") SubClassOf( ) SubClassOf( ) # Class: (artery of upper lip) AnnotationAssertion(Annotation( ) "The superior labial artery (superior labial branch of facial artery) is larger and more tortuous than the inferior labial artery. It follows a similar course along the edge of the upper lip, lying between the mucous membrane and the Orbicularis oris, and anastomoses with the artery of the opposite side. It supplies the upper lip, and gives off in its course two or three vessels which ascend to the nose; a septal branch ramifies on the nasal septum as far as the point of the nose, and an alar branch supplies the ala of the nose.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37430") AnnotationAssertion( "FMA:49570") AnnotationAssertion( "MA:0001917") AnnotationAssertion(Annotation( ) Annotation( ) "arteria labialis superior") AnnotationAssertion(Annotation( ) Annotation( ) "ramus labialis superior arteriae facialis") AnnotationAssertion(Annotation( "FMA:49570") "superior labial artery") AnnotationAssertion(Annotation( "FMA:49570") "superior labial branch of facial artery") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003470") AnnotationAssertion(rdfs:label "artery of upper lip") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (artery of lower lip) AnnotationAssertion(Annotation( ) "The inferior labial artery (inferior labial branch of facial artery) arises near the angle of the mouth; it passes upward and forward beneath the Triangularis and, penetrating the Orbicularis oris, runs in a tortuous course along the edge of the lower lip between this muscle and the mucous membrane. It supplies the labial glands, the mucous membrane, and the muscles of the lower lip; and anastomoses with the artery of the opposite side, and with the mental branch of the inferior alveolar artery.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37429") AnnotationAssertion( "FMA:49567") AnnotationAssertion( "MA:0001916") AnnotationAssertion(Annotation( ) Annotation( ) "arteria labialis inferior") AnnotationAssertion(Annotation( "FMA:49567") "inferior labial artery") AnnotationAssertion(Annotation( "FMA:49567") "inferior labial branch of facial artery") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) "ramus labialis inferior (arteria facialis)") AnnotationAssertion(Annotation( ) Annotation( ) "ramus labialis inferior arteriae facialis") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003471") AnnotationAssertion(rdfs:label "artery of lower lip") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (cerebellar artery) AnnotationAssertion(Annotation( ) "An artery that supplies blood to the cerebellum.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0000228") AnnotationAssertion( "EHDAA:5290") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37074") AnnotationAssertion( "MA:0001933") AnnotationAssertion( "NCIT:C52845") AnnotationAssertion(Annotation( "ncithesaurus:Cerebellar_Artery") "UMLS:C0226246") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003472") AnnotationAssertion(rdfs:label "cerebellar artery") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/e/e1/CerebellumArteries.jpg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (thoracic cavity artery) AnnotationAssertion(Annotation( ) "An artery that is part of a thoracic cavity[cjm].") AnnotationAssertion(Annotation( "MA"^^xsd:string) "in MA, aorta is classified here - but this is problematic because the abdominal aorta is not in the thoracic cavity") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37241") AnnotationAssertion( "MA:0001902") AnnotationAssertion( "MESH:D013895") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "MESH:A07.231.114.891") "thoracic artery") AnnotationAssertion( "UBERON:0003473") AnnotationAssertion(rdfs:label "thoracic cavity artery") SubClassOf( ) SubClassOf( ) # Class: (meningeal artery) AnnotationAssertion(Annotation( ) "One of the arteries supplying a meninix[Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37104") AnnotationAssertion( "GAID:499") AnnotationAssertion( "MA:0002001") AnnotationAssertion( "MESH:D008576") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003474") AnnotationAssertion(rdfs:label "meningeal artery") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (ureteric vein) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A vein that is part of a ureter [Automatically generated definition].") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37679") AnnotationAssertion( "MA:0002250") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "ureter vein") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "vein of ureter") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003475") AnnotationAssertion(rdfs:label "ureteric vein") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (respiratory system venous blood vessel) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A vein that is part of a respiratory system [Automatically generated definition].") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37584") AnnotationAssertion( "MA:0001809") AnnotationAssertion( "MA:0001810") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "apparatus respiratorius vein") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "respiratory system vein") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "vein of apparatus respiratorius") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "vein of respiratory system") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003476") AnnotationAssertion(rdfs:label "respiratory system venous blood vessel") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (vein of upper lip) AnnotationAssertion(Annotation( ) "The inferior labial vein is the vein receiving blood from the upper lip.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37204") AnnotationAssertion( "FMA:52538") AnnotationAssertion( "MA:0002255") AnnotationAssertion(Annotation( "FMA:52538") "superior labial vein") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "upper lip vein") AnnotationAssertion(Annotation( ) "vena labialis superior") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003477") AnnotationAssertion(rdfs:label "vein of upper lip") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (vein of lower lip) AnnotationAssertion(Annotation( ) "The inferior labial vein is the vein receiving blood from the lower lip.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37202") AnnotationAssertion( "FMA:52541") AnnotationAssertion( "MA:0002253") AnnotationAssertion(Annotation( "FMA:52541") "inferior labial vein") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "lower lip vein") AnnotationAssertion(Annotation( ) "vena labialis inferior") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "venae labiales inferiores") AnnotationAssertion( "UBERON:0003478") AnnotationAssertion(rdfs:label "vein of lower lip") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/8/8c/Gray557.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (thoracic cavity vein) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A vein that is part of a thoracic cavity [Automatically generated definition].") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37242") AnnotationAssertion( "MA:0001903") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "cavity of chest vein") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "cavity of thorax vein") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "chest cavity vein") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "pectoral cavity vein") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "vein of cavity of chest") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "vein of cavity of thorax") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "vein of chest cavity") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "vein of pectoral cavity") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "vein of thoracic cavity") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003479") AnnotationAssertion(rdfs:label "thoracic cavity vein") SubClassOf( ) SubClassOf( ) # Class: (vein of clitoris) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A vein that is part of a clitoris [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37201") AnnotationAssertion( "MA:0002252") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "clitoris vein") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003480") AnnotationAssertion(rdfs:label "vein of clitoris") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (vein of trabecular bone) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A portion of vein that is part of a trabecular bone tissue [Automatically generated definition].") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37203") AnnotationAssertion( "MA:0002254") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "spongy bone vein") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "trabecular bone tissue vein") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "trabecular bone vein") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "vein of spongy bone") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "vein of trabecular bone tissue") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003482") AnnotationAssertion(rdfs:label "vein of trabecular bone") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (thymus lymphoid tissue) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A portion of lymphoid tissue that is part of a thymus [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37766") AnnotationAssertion( "MA:0002673") AnnotationAssertion( "MESH:A06.407.850") AnnotationAssertion( "NCIT:C38515") AnnotationAssertion(Annotation( "ncithesaurus:Thymic_Lymphoid_Tissue") "UMLS:C1515429") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "lymphoid tissue of thymus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "lymphoid tissue of thymus gland") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "thymus gland lymphoid tissue") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003483") AnnotationAssertion(rdfs:label "thymus lymphoid tissue") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (eye sebaceous gland) AnnotationAssertion(Annotation( ) "A sebaceous gland that is part of a camera-type eye. Example: a tarsal gland.") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37531") AnnotationAssertion( "MA:0002452") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "camera-type eye sebaceous gland") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "sebaceous gland of camera-type eye") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "sebaceous gland of vertebrate eye") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "vertebrate eye sebaceous gland") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003484") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "eye sebaceous gland") SubClassOf(Annotation( "MA"^^xsd:string) ) SubClassOf( ) # Class: (vagina sebaceous gland) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A sebaceous gland that is part of a vagina [Automatically generated definition].") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37793") AnnotationAssertion( "MA:0001732") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "sebaceous gland of vagina") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003485") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "vagina sebaceous gland") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete mammary gland sebaceous gland) AnnotationAssertion( "this class was obsoleted as it was defined inconsistently") AnnotationAssertion( "UBERON:0011827") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003486") AnnotationAssertion(rdfs:label "obsolete mammary gland sebaceous gland") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (skin sebaceous gland) AnnotationAssertion(Annotation( "MP:0009535") "A holocrine gland of the dermis that secretes sebum into hair follicles.") AnnotationAssertion( ) AnnotationAssertion( "MA:0000149") AnnotationAssertion( "cutaneous sebaceous gland") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "sebaceous gland of skin") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003487") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "skin sebaceous gland") SubClassOf( ) # Class: (abdominal mammary gland) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A lactiferous gland that is part of the abdominal region [Automatically generated definition].") AnnotationAssertion( "Female mice normally have five pairs of nipples and mammary glands, three in the thoracic and two in the abdominal region. (There is an additional abdominal pair in female rats.) http://www.informatics.jax.org/greenbook/chapters/chapter13.shtml") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:36507") AnnotationAssertion( "MA:0000787") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "abdomen lactiferous gland") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "abdomen lobe of breast") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "abdomen lobe of mammary gland") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "abdomen mammary gland") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "lactiferous gland of abdomen") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "lobe of breast of abdomen") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "lobe of mammary gland of abdomen") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mammary gland of abdomen") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003488") AnnotationAssertion(rdfs:label "abdominal mammary gland") SubClassOf( ) SubClassOf( ) # Class: (respiratory system capillary endothelium) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An endothelium of capillary that is part of a respiratory system [Automatically generated definition].") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37575") AnnotationAssertion( "MA:0001808") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "apparatus respiratorius blood capillary endothelium") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "apparatus respiratorius capillary endothelium") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "apparatus respiratorius capillary vessel endothelium") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "apparatus respiratorius endothelium of blood capillary") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "apparatus respiratorius endothelium of capillary") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "apparatus respiratorius endothelium of capillary vessel") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "blood capillary endothelium of apparatus respiratorius") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "blood capillary endothelium of respiratory system") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "capillary endothelium of apparatus respiratorius") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "capillary endothelium of respiratory system") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "capillary vessel endothelium of apparatus respiratorius") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "capillary vessel endothelium of respiratory system") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "endothelium of blood capillary of apparatus respiratorius") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "endothelium of blood capillary of respiratory system") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "endothelium of capillary of apparatus respiratorius") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "endothelium of capillary of respiratory system") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "endothelium of capillary vessel of apparatus respiratorius") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "endothelium of capillary vessel of respiratory system") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "respiratory system blood capillary endothelium") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "respiratory system capillary vessel endothelium") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "respiratory system endothelium of blood capillary") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "respiratory system endothelium of capillary") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "respiratory system endothelium of capillary vessel") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003489") AnnotationAssertion(rdfs:label "respiratory system capillary endothelium") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (respiratory system reticular lamina) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A reticular lamina that is part of a respiratory system [Automatically generated definition].") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37572") AnnotationAssertion( "MA:0001817") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "apparatus respiratorius fibroreticular lamina") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "apparatus respiratorius lamina fibroreticularis") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "apparatus respiratorius reticular lamina") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "fibroreticular lamina of apparatus respiratorius") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "fibroreticular lamina of respiratory system") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "lamina fibroreticularis of apparatus respiratorius") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "lamina fibroreticularis of respiratory system") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "respiratory system fibroreticular lamina") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "respiratory system lamina fibroreticularis") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "reticular lamina of apparatus respiratorius") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "reticular lamina of respiratory system") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003490") AnnotationAssertion(rdfs:label "respiratory system reticular lamina") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (bronchus reticular lamina) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A reticular lamina that is part of a bronchus [Automatically generated definition].") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37811") AnnotationAssertion( "MA:0001834") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bronchi fibroreticular lamina") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bronchi lamina fibroreticularis") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bronchi reticular lamina") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bronchial trunk fibroreticular lamina") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bronchial trunk lamina fibroreticularis") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bronchial trunk reticular lamina") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bronchus fibroreticular lamina") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bronchus lamina fibroreticularis") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "fibroreticular lamina of bronchi") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "fibroreticular lamina of bronchial trunk") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "fibroreticular lamina of bronchus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "lamina fibroreticularis of bronchi") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "lamina fibroreticularis of bronchial trunk") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "lamina fibroreticularis of bronchus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "reticular lamina of bronchi") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "reticular lamina of bronchial trunk") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "reticular lamina of bronchus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003492") AnnotationAssertion(rdfs:label "bronchus reticular lamina") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (trachea reticular lamina) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A reticular lamina that is part of a trachea [Automatically generated definition].") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37554") AnnotationAssertion( "MA:0001856") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "fibroreticular lamina of cartilaginous trachea") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "fibroreticular lamina of windpipe") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "lamina fibroreticularis of cartilaginous trachea") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "lamina fibroreticularis of windpipe") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "reticular lamina of cartilaginous trachea") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "reticular lamina of windpipe") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "windpipe fibroreticular lamina") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "windpipe lamina fibroreticularis") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "windpipe reticular lamina") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003493") AnnotationAssertion(rdfs:label "trachea reticular lamina") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (respiratory system venule) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A venule that is part of a respiratory system [Automatically generated definition].") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37587") AnnotationAssertion( "MA:0001813") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "apparatus respiratorius venule") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "venule of apparatus respiratorius") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "venule of respiratory system") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003494") AnnotationAssertion(rdfs:label "respiratory system venule") SubClassOf( ) SubClassOf( ) # Class: (respiratory system arteriole) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An arteriole that is part of a respiratory system [Automatically generated definition].") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37568") AnnotationAssertion( "MA:0001803") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003495") AnnotationAssertion(rdfs:label "respiratory system arteriole") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (head blood vessel) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A blood vessel that is part of a head [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:36610") AnnotationAssertion( "MA:0000575") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "adult head blood vessel") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "blood vessel of adult head") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "blood vessel of head") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003496") AnnotationAssertion(rdfs:label "head blood vessel") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (abdomen blood vessel) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A blood vessel that is part of an abdomen [Automatically generated definition].") AnnotationAssertion( "MA:0000518") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "blood vessel of abdomen") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003497") AnnotationAssertion(rdfs:label "abdomen blood vessel") AnnotationAssertion(Annotation( "abdominal aorta artery") rdfs:seeAlso "UBERON:0012254") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (heart blood vessel) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A blood vessel that is part of a heart [Automatically generated definition].") AnnotationAssertion( "EMAPA:35397") AnnotationAssertion( "MA:0002483") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "blood vessel of heart") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "EMAPA:35397") "cardiac blood vessel") AnnotationAssertion( "UBERON:0003498") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "heart blood vessel") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (brain blood vessel) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A blood vessel that is part of a brain [Automatically generated definition].") AnnotationAssertion( "EMAPA:35182") AnnotationAssertion( "MA:0002769") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "blood vessel of brain") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003499") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "brain blood vessel") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (corneal blood vessel) AnnotationAssertion(Annotation( ) Annotation( ) "A blood vessel that is part of a cornea [Automatically generated definition].") AnnotationAssertion( "follow up on tracker item") AnnotationAssertion(Annotation( ) ) AnnotationAssertion( "EMAPA:36611") AnnotationAssertion( "MA:0001241") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "blood vessel of cornea") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "cornea blood vessel") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003500") AnnotationAssertion(rdfs:label "corneal blood vessel") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (retina blood vessel) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A blood vessel that is part of a retina [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:36520") AnnotationAssertion( "GAID:509") AnnotationAssertion( "MA:0001317") AnnotationAssertion( "MESH:D012171") AnnotationAssertion( "XAO:0004153") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "blood vessel of inner layer of eyeball") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "blood vessel of retina") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "blood vessel of tunica interna of eyeball") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "inner layer of eyeball blood vessel") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "retinal blood vessel") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "tunica interna of eyeball blood vessel") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003501") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "retina blood vessel") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (neck blood vessel) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A blood vessel that is part of a neck [Automatically generated definition].") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37236") AnnotationAssertion( "MA:0000583") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "blood vessel of neck") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "blood vessel of neck (volume)") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "neck (volume) blood vessel") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003502") AnnotationAssertion(rdfs:label "neck blood vessel") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (leg blood vessel) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A blood vessel that is part of a leg [Automatically generated definition].") AnnotationAssertion( "EMAPA:36500") AnnotationAssertion( "MA:0000669") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "blood vessel of leg") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003503") AnnotationAssertion(rdfs:label "leg blood vessel") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (respiratory system blood vessel) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A blood vessel that is part of a respiratory system [Automatically generated definition].") AnnotationAssertion( "EMAPA:35731") AnnotationAssertion( "EMAPA:35995") AnnotationAssertion( "MA:0001799") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "apparatus respiratorius blood vessel") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "blood vessel of apparatus respiratorius") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "blood vessel of respiratory system") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003504") AnnotationAssertion(rdfs:label "respiratory system blood vessel") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (trachea blood vessel) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A blood vessel that is part of a trachea.") AnnotationAssertion( "UBERON:0003525") AnnotationAssertion( "EMAPA:35874") AnnotationAssertion( "MA:0001852") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "blood vessel of trachea") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003505") AnnotationAssertion(rdfs:label "trachea blood vessel") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (chest blood vessel) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A blood vessel that is part of a chest [Automatically generated definition].") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37239") AnnotationAssertion( "MA:0000549") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "anterior thoracic region blood vessel") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "anterolateral part of thorax blood vessel") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "blood vessel of anterior thoracic region") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "blood vessel of anterolateral part of thorax") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "blood vessel of chest") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "blood vessel of front of thorax") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "front of thorax blood vessel") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003506") AnnotationAssertion(rdfs:label "chest blood vessel") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (arm blood vessel) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A blood vessel that is part of an arm [Automatically generated definition].") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37293") AnnotationAssertion( "MA:0000591") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "blood vessel of arm") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003507") AnnotationAssertion(rdfs:label "arm blood vessel") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pedal digit blood vessel) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A blood vessel that is part of a toe [Automatically generated definition].") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37302") AnnotationAssertion( "MA:0000645") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "blood vessel of digit of foot") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "blood vessel of digit of terminal segment of free lower limb") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "blood vessel of digitus pedis") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "blood vessel of foot digit") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "blood vessel of terminal segment of free lower limb digit") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "blood vessel of toe") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "digit of foot blood vessel") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "digit of terminal segment of free lower limb blood vessel") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "digitus pedis blood vessel") AnnotationAssertion(Annotation( "MA:0000645") "foot digit blood vessel") AnnotationAssertion(Annotation( "OBOL:accepted"^^xsd:string) "hind limb digit blood vessel") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "terminal segment of free lower limb digit blood vessel") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "toe blood vessel") AnnotationAssertion(Annotation( "NCBITaxon:9606"^^xsd:string) Annotation( "OBOL:accepted"^^xsd:string) Annotation( ) "foot digit blood vessel") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003508") AnnotationAssertion(rdfs:label "pedal digit blood vessel") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (arterial blood vessel) AnnotationAssertion(Annotation( ) "A blood vessel that is part of the arterial system. Includes artery, arteriole and aorta.") AnnotationAssertion( "EMAPA:35144") AnnotationAssertion( "MA:0000061") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003509") AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "only in MA - supertype of artery, arteriole, aorta.") AnnotationAssertion(rdfs:label "arterial blood vessel") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (eyelid blood vessel) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A blood vessel that is part of a eyelid [Automatically generated definition].") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37388") AnnotationAssertion( "MA:0001250") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "blepharon blood vessel") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "blood vessel of blepharon") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "blood vessel of eyelid") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003510") AnnotationAssertion(rdfs:label "eyelid blood vessel") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (iris blood vessel) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A blood vessel that is part of a iris [Automatically generated definition].") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37387") AnnotationAssertion( "MA:0001290") AnnotationAssertion( "ZFA:0005568") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "blood vessel of iris") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003511") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "iris blood vessel") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lung blood vessel) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A blood vessel that is part of a lung [Automatically generated definition].") AnnotationAssertion( "EMAPA:32867") AnnotationAssertion( "MA:0002457") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "blood vessel of lung") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "EMAPA:32867") "pulmonary vascular element") AnnotationAssertion( "UBERON:0003512") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "lung blood vessel") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (trunk blood vessel) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A blood vessel that is part of a trunk [Automatically generated definition].") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37237") AnnotationAssertion( "MA:0000511") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "blood vessel of torso") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "blood vessel of trunk") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "torso blood vessel") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003513") AnnotationAssertion(rdfs:label "trunk blood vessel") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (limb blood vessel) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A blood vessel that is part of a limb [Automatically generated definition].") AnnotationAssertion( "EMAPA:36598") AnnotationAssertion( "MA:0000687") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "blood vessel of limb") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003514") AnnotationAssertion(rdfs:label "limb blood vessel") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (forelimb blood vessel) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A blood vessel that is part of a forelimb [Automatically generated definition].") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37292") AnnotationAssertion( "MA:0000611") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "anteriormost limb blood vessel") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "blood vessel of anteriormost limb") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "blood vessel of fore limb") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "blood vessel of forelimb") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "blood vessel of upper extremity") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "fore limb blood vessel") AnnotationAssertion(Annotation( "NCBITaxon:8782"^^xsd:string) Annotation( "OBOL:automatic"^^xsd:string) Annotation( ) "wing blood vessel") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003515") AnnotationAssertion(rdfs:label "forelimb blood vessel") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (hindlimb blood vessel) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A blood vessel that is part of a hindlimb [Automatically generated definition].") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37298") AnnotationAssertion( "MA:0000659") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "blood vessel of hind limb") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "blood vessel of hindlimb") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "blood vessel of lower extremity") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "hind limb blood vessel") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003516") AnnotationAssertion(rdfs:label "hindlimb blood vessel") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (kidney blood vessel) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A blood vessel that is part of a kidney [Automatically generated definition].") AnnotationAssertion( "EMAPA:28457") AnnotationAssertion( "MA:0001682") AnnotationAssertion( "TAO:0005306") AnnotationAssertion( "ZFA:0005306") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "blood vessel of kidney") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "renal blood vessel") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003517") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "kidney blood vessel") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (main bronchus blood vessel) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A blood vessel that is part of a main bronchus [Automatically generated definition].") AnnotationAssertion( "EMAPA:16852") AnnotationAssertion( "MA:0001844") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "blood vessel of bronchus principalis") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "blood vessel of main bronchus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "blood vessel of primary bronchus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "blood vessel of principal bronchus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bronchus principalis blood vessel") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "primary bronchus blood vessel") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "principal bronchus blood vessel") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "EMAPA:16852") "primary bronchus vascular element") AnnotationAssertion(Annotation( "EMAPA:16852") "principal bronchus vascular element") AnnotationAssertion( "UBERON:0003518") AnnotationAssertion(rdfs:label "main bronchus blood vessel") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (thoracic cavity blood vessel) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A blood vessel that is part of a thoracic cavity [Automatically generated definition].") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37240") AnnotationAssertion( "MA:0000554") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "blood vessel of cavity of chest") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "blood vessel of cavity of thorax") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "blood vessel of chest cavity") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "blood vessel of pectoral cavity") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "blood vessel of thoracic cavity") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "cavity of chest blood vessel") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "cavity of thorax blood vessel") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "chest cavity blood vessel") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "pectoral cavity blood vessel") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003519") AnnotationAssertion(rdfs:label "thoracic cavity blood vessel") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pelvis blood vessel) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A blood vessel that is part of a pelvis [Automatically generated definition].") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37244") AnnotationAssertion( "MA:0000531") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "blood vessel of pelvis") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003520") AnnotationAssertion(rdfs:label "pelvis blood vessel") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pes blood vessel) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A blood vessel that is part of a foot [Automatically generated definition].") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37301") AnnotationAssertion( "MA:0000642") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "blood vessel of foot") AnnotationAssertion(Annotation( "MA:0000642") "foot blood vessel") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003521") AnnotationAssertion(rdfs:label "pes blood vessel") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (manual digit blood vessel) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A blood vessel that is part of a finger [Automatically generated definition].") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37297") AnnotationAssertion( "MA:0000621") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "blood vessel of digit of terminal segment of free upper limb") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "blood vessel of terminal segment of free upper limb digit") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "digit of terminal segment of free upper limb blood vessel") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "finger blood vessel") AnnotationAssertion(Annotation( "MA:0000621") "hand digit blood vessel") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "terminal segment of free upper limb digit blood vessel") AnnotationAssertion(Annotation( "NCBITaxon:9606"^^xsd:string) Annotation( "OBOL:accepted"^^xsd:string) Annotation( ) "hand digit blood vessel") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003522") AnnotationAssertion(rdfs:label "manual digit blood vessel") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (manus blood vessel) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A blood vessel that is part of a manus [Automatically generated definition].") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37296") AnnotationAssertion( "MA:0000618") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "blood vessel of hand") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "blood vessel of manus") AnnotationAssertion(Annotation( "MA:0000618") "hand blood vessel") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003523") AnnotationAssertion(rdfs:label "manus blood vessel") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (respiratory system capillary) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A capillary that is part of a respiratory system [Automatically generated definition].") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37574") AnnotationAssertion( "MA:0001807") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "apparatus respiratorius blood capillary") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "apparatus respiratorius capillary") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "apparatus respiratorius capillary vessel") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "blood capillary of apparatus respiratorius") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "blood capillary of respiratory system") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "capillary of apparatus respiratorius") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "capillary of respiratory system") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "capillary vessel of apparatus respiratorius") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "capillary vessel of respiratory system") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "respiratory system blood capillary") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "respiratory system capillary vessel") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003526") AnnotationAssertion(rdfs:label "respiratory system capillary") SubClassOf( ) SubClassOf( ) # Class: (kidney capillary) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A capillary that is part of a kidney [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:31443") AnnotationAssertion( "MA:0002586") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "blood capillary of kidney") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "capillary of kidney") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "capillary vessel of kidney") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "kidney blood capillary") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "kidney capillary vessel") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "renal capillary") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003527") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "kidney capillary") SubClassOf( ) SubClassOf( ) # Class: (brain gray matter) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A gray matter that is part of a brain [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:35184") AnnotationAssertion( "MA:0000810") AnnotationAssertion( "NCIT:C49333") AnnotationAssertion(Annotation( "ncithesaurus:Cerebral_Gray_Matter") "UMLS:C1707348") AnnotationAssertion(Annotation( "MA:0000810") "brain grey matter") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "brain grey substance") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "gray matter of brain") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "grey matter of brain") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "grey substance of brain") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003528") AnnotationAssertion(rdfs:label "brain gray matter") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (respiratory system lymphatic vessel endothelium) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An lymphatic vessel endothelium that is part of a respiratory system [Automatically generated definition].") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37581") AnnotationAssertion( "MA:0001825") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "apparatus respiratorius endothelium of lymph vessel") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "apparatus respiratorius lymph vessel endothelium") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "apparatus respiratorius lymphatic vessel endothelium") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "endothelium of lymph vessel of apparatus respiratorius") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "endothelium of lymph vessel of respiratory system") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "lymph vessel endothelium of apparatus respiratorius") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "lymph vessel endothelium of respiratory system") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "lymphatic vessel endothelium of apparatus respiratorius") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "lymphatic vessel endothelium of respiratory system") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "respiratory system endothelium of lymph vessel") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "respiratory system lymph vessel endothelium") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "respiratory system lymphatic vessel endothelium") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003529") AnnotationAssertion(rdfs:label "respiratory system lymphatic vessel endothelium") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pedal digit skin) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A zone of skin that is part of a toe [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:32942") AnnotationAssertion( "FMA:37852") AnnotationAssertion( "MA:0000650") AnnotationAssertion( "NCIT:C52719") AnnotationAssertion(Annotation( "ncithesaurus:Foot_Digit_Skin") "UMLS:C1708089") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "digit of foot skin") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "digit of terminal segment of free lower limb skin") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "digitus pedis skin") AnnotationAssertion(Annotation( "MA:0000650") "foot digit skin") AnnotationAssertion(Annotation( "OBOL:accepted"^^xsd:string) "hind limb digit skin") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "skin of digit of foot") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "skin of digit of terminal segment of free lower limb") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "skin of digitus pedis") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "skin of foot digit") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "skin of terminal segment of free lower limb digit") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "skin of toe") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "terminal segment of free lower limb digit skin") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "toe skin") AnnotationAssertion(Annotation( "NCBITaxon:9606"^^xsd:string) Annotation( "OBOL:accepted"^^xsd:string) Annotation( ) "foot digit skin") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003530") AnnotationAssertion(rdfs:label "pedal digit skin") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (forelimb skin) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A zone of skin that is part of a forelimb [Automatically generated definition].") AnnotationAssertion( "TODO - check free limb vs pectoral complex") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:32612") AnnotationAssertion( "FMA:23101") AnnotationAssertion( "MA:0000617") AnnotationAssertion( "NCIT:C12296") AnnotationAssertion(Annotation( "ncithesaurus:Skin_of_the_Upper_Limb_and_Shoulder") "UMLS:C0222212") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "anteriormost limb skin") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "fore limb skin") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "skin of fore limb") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "skin of forelimb") AnnotationAssertion(Annotation( "FMA:23101") "skin of upper limb") AnnotationAssertion(Annotation( "FMA:23101") "upper limb skin") AnnotationAssertion(Annotation( "NCBITaxon:8782"^^xsd:string) Annotation( "OBOL:automatic"^^xsd:string) Annotation( ) "wing skin") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003531") AnnotationAssertion(rdfs:label "forelimb skin") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (hindlimb skin) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A zone of skin that is part of a hindlimb [Automatically generated definition].") AnnotationAssertion( "TODO - check free limb vs pelvic complex") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:32620") AnnotationAssertion( "FMA:23102") AnnotationAssertion( "MA:0000665") AnnotationAssertion( "NCIT:C12297") AnnotationAssertion(Annotation( "ncithesaurus:Skin_of_the_Lower_Limb_and_Hip") "UMLS:C0222268") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "hind limb skin") AnnotationAssertion(Annotation( "FMA:23102") "lower limb skin") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "skin of hind limb") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "skin of hindlimb") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "skin of lower extremity") AnnotationAssertion(Annotation( "FMA:23102") "skin of lower limb") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003532") AnnotationAssertion(rdfs:label "hindlimb skin") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (manual digit skin) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A zone of skin that is part of a finger [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:32648") AnnotationAssertion( "FMA:38304") AnnotationAssertion( "MA:0000626") AnnotationAssertion( "NCIT:C52720") AnnotationAssertion(Annotation( "ncithesaurus:Hand_Digit_Skin") "UMLS:C1708318") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "digit of hand skin") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "digit of terminal segment of free upper limb skin") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "digitus manus skin") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "finger skin") AnnotationAssertion(Annotation( "OBOL:accepted"^^xsd:string) "fore limb digit skin") AnnotationAssertion(Annotation( "MA:0000626") "hand digit skin") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "skin of digit of hand") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "skin of digit of terminal segment of free upper limb") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "skin of digitus manus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "skin of finger") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "skin of hand digit") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "skin of terminal segment of free upper limb digit") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "terminal segment of free upper limb digit skin") AnnotationAssertion(Annotation( "NCBITaxon:9606"^^xsd:string) Annotation( "OBOL:accepted"^^xsd:string) Annotation( ) "hand digit skin") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003533") AnnotationAssertion(rdfs:label "manual digit skin") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (vagus X nerve trunk) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A nerve trunk that is part of a vagus nerve.") AnnotationAssertion( "UBERON:0006308") AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0002160") AnnotationAssertion( "EHDAA:4659") AnnotationAssertion( "EMAPA:17272") AnnotationAssertion( "FMA:6221") AnnotationAssertion( "MA:0001150") AnnotationAssertion( "VHOG:0000736") AnnotationAssertion( "trunk of vagal nerve") AnnotationAssertion(Annotation( "FMA:6221") "trunk of vagus nerve") AnnotationAssertion(Annotation( "EMAPA:17272") "vagal X nerve trunk") AnnotationAssertion(Annotation( "EMAPA:17272") "vagal nerve trunk") AnnotationAssertion( "vagus nerve trunk") AnnotationAssertion(Annotation( "FMA:6221") "vagus neural trunk") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003535") AnnotationAssertion(rdfs:label "vagus X nerve trunk") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (right lung alveolar duct) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An alveolar duct that is part of a right lung [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:35819") AnnotationAssertion( "MA:0001785") AnnotationAssertion( "NCIT:C49277") AnnotationAssertion(Annotation( "ncithesaurus:Right_Lung_Alveolar_Duct") "UMLS:C1709958") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "alveolar duct of right lung") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003536") AnnotationAssertion(rdfs:label "right lung alveolar duct") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (left lung alveolar duct) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An alveolar duct that is part of a left lung [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:19183") AnnotationAssertion( "MA:0001776") AnnotationAssertion( "NCIT:C49250") AnnotationAssertion(Annotation( "ncithesaurus:Left_Lung_Alveolar_Duct") "UMLS:C1708672") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "alveolar duct of left lung") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003537") AnnotationAssertion(rdfs:comment "Mice have 1 left lobe") AnnotationAssertion(rdfs:label "left lung alveolar duct") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (right lung bronchiole) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A bronchiole that is part of a right lung [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:35425") AnnotationAssertion( "MA:0001787") AnnotationAssertion( "NCIT:C49279") AnnotationAssertion(Annotation( "ncithesaurus:Right_Lung_Bronchiole") "UMLS:C0225670") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bronchiole of right lung") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "lobular bronchiole of right lung") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "right lung lobular bronchiole") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003538") AnnotationAssertion(rdfs:label "right lung bronchiole") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (left lung bronchiole) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A bronchiole that is part of a left lung [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:19000") AnnotationAssertion( "MA:0001778") AnnotationAssertion( "NCIT:C49252") AnnotationAssertion(Annotation( "ncithesaurus:Left_Lung_Bronchiole") "UMLS:C0225674") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bronchiole of left lung") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "left lung lobular bronchiole") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "lobular bronchiole of left lung") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003539") AnnotationAssertion(rdfs:label "left lung bronchiole") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (right lung terminal bronchiole) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A terminal bronchiole that is part of a right lung [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:36638") AnnotationAssertion( "MA:0001789") AnnotationAssertion( "NCIT:C49294") AnnotationAssertion(Annotation( "ncithesaurus:Right_Lung_Terminal_Bronchiole") "UMLS:C1709961") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bronchiolus terminalis of right lung") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "right lung bronchiolus terminalis") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "terminal bronchiole of right lung") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003540") AnnotationAssertion(rdfs:label "right lung terminal bronchiole") SubClassOf( ) SubClassOf( ) # Class: (left lung terminal bronchiole) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A terminal bronchiole that is part of a left lung [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:36636") AnnotationAssertion( "MA:0001780") AnnotationAssertion( "NCIT:C49255") AnnotationAssertion(Annotation( "ncithesaurus:Left_Lung_Terminal_Bronchiole") "UMLS:C1708675") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bronchiolus terminalis of left lung") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "left lung bronchiolus terminalis") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "terminal bronchiole of left lung") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003541") AnnotationAssertion(rdfs:label "left lung terminal bronchiole") SubClassOf( ) SubClassOf( ) # Class: (right lung respiratory bronchiole) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A respiratory bronchiole that is part of a right lung [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:36637") AnnotationAssertion( "MA:0001788") AnnotationAssertion( "NCIT:C49285") AnnotationAssertion(Annotation( "ncithesaurus:Right_Lung_Respiratory_Bronchiole") "UMLS:C1709960") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bronchiolus respiratorius of right lung") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "respiratory bronchiole of right lung") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "right lung bronchiolus respiratorius") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003542") AnnotationAssertion(rdfs:label "right lung respiratory bronchiole") SubClassOf( ) SubClassOf( ) # Class: (left lung respiratory bronchiole) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A respiratory bronchiole that is part of a left lung [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:36635") AnnotationAssertion( "MA:0001779") AnnotationAssertion( "NCIT:C49254") AnnotationAssertion(Annotation( "ncithesaurus:Left_Lung_Respiratory_Bronchiole") "UMLS:C1708674") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bronchiolus respiratorius of left lung") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "left lung bronchiolus respiratorius") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "respiratory bronchiole of left lung") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003543") AnnotationAssertion(rdfs:label "left lung respiratory bronchiole") SubClassOf( ) SubClassOf( ) # Class: (brain white matter) AnnotationAssertion(Annotation( "MP:0008026") "The regions of the brain that are largely or entirely composed of myelinated nerve cell axons and contain few or no neural cell bodies or dendrites.") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:35187") AnnotationAssertion( "HBA:9218") AnnotationAssertion( "MA:0000820") AnnotationAssertion( "NCIT:C49334") AnnotationAssertion(Annotation( "ncithesaurus:Brain_White_Matter") "UMLS:C1706995") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "brain white matter of neuraxis") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "brain white substance") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "white matter of brain") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "white matter of neuraxis of brain") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "white substance of brain") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003544") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "brain white matter") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete brainstem white matter) AnnotationAssertion( "MA:0002741") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003545") AnnotationAssertion(rdfs:comment "obsoleted as definition is unclear. cerebellar peduncle originally classified here but in ABA brainstem and cerbellum are spatially disjoint") AnnotationAssertion(rdfs:label "obsolete brainstem white matter") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (distal convoluted tubule macula densa) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A macula densa that is part of a distal convoluted tubule [Automatically generated definition].") AnnotationAssertion( "MA:0001668") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003546") AnnotationAssertion(rdfs:label "distal convoluted tubule macula densa") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "MA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "MA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (brain meninx) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A meninx that is part of a brain [Automatically generated definition].") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000013") Annotation( "VHOG"^^xsd:string) Annotation( ) "Meninges that are part of the brain. [Bgee_curator][VHOG]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000013") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0072528305 Kardong KV, Vertebrates: Comparative Anatomy, Function, Evolution (2006) p.639"^^xsd:string) "In fishes, the meninges consist of a single membrane, the primitive meninx, wrapped around the brain and spinal cord. With the adoption of terrestrial life, the meninges doubled. In amphibians, reptiles, and birds, the meninges include a thick outer dura mater derived from mesoderm and a thin inner secondary meninx. (...) In mammals, the dura mater persists, but division of the secondary meninx yields both the arachnoid and the pia mater from ectomesoderm.[well established][VHOG]") AnnotationAssertion( ) AnnotationAssertion( "CALOHA:TS-2147") AnnotationAssertion( "EMAPA:32662") AnnotationAssertion( "EV:0100312") AnnotationAssertion( "MA:0000813") AnnotationAssertion( "VHOG:0000013") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "brain meninges") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "meninges of brain") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "meninx of brain") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003547") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "brain meninx") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (forebrain meninges) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A meninx that is part of a forebrain [Automatically generated definition].") AnnotationAssertion( "EMAPA:17764") AnnotationAssertion( "EMAPA:17774") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37543") AnnotationAssertion( "MA:0000883") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "forebrain meninx") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "meninges of forebrain") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "meninx of forebrain") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003548") AnnotationAssertion(rdfs:label "forebrain meninges") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (brain pia mater) AnnotationAssertion(Annotation( "MP:0009026") "The fibrous membrane forming the innermost of the three coverings that surrounds the brain within the cranial cavity that is firmly attached to the glial capsule.") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000470") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( ) "The innermost of the three mammalian meninges covering the brain and spinal cord. [TFD][VHOG]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000470") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0072528305 Kardong KV, Vertebrates: Comparative Anatomy, Function, Evolution (2006) p.639"^^xsd:string) "In fishes, the meninges consist of a single membrane, the primitive meninx, wrapped around the brain and spinal cord. With the adoption of terrestrial life, the meninges doubled. In amphibians, reptiles, and birds, the meninges include a thick outer dura mater derived from mesoderm and a thin inner secondary meninx. (...) In mammals, the dura mater persists, but division of the secondary meninx yields both the arachnoid and the pia mater from ectomesoderm.[well established][VHOG]") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:32667") AnnotationAssertion( "EV:0100315") AnnotationAssertion( "MA:0000816") AnnotationAssertion( "NCIT:C49335") AnnotationAssertion(Annotation( "ncithesaurus:Brain_Pia_Mater") "UMLS:C1706994") AnnotationAssertion( "VHOG:0000470") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "brain pia mater of neuraxis") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "pia mater of brain") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "pia mater of neuraxis of brain") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003549") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "brain pia mater") SubClassOf( ) SubClassOf( ) # Class: (forebrain pia mater) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A pia mater that is part of a forebrain [Automatically generated definition].") AnnotationAssertion( "EMAPA:17767") AnnotationAssertion( "EMAPA:17777") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37546") AnnotationAssertion( "MA:0000886") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "forebrain pia mater of neuraxis") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "pia mater of forebrain") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "pia mater of neuraxis of forebrain") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003550") AnnotationAssertion(rdfs:label "forebrain pia mater") SubClassOf( ) SubClassOf( ) # Class: (midbrain pia mater) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A pia mater that is part of a midbrain [Automatically generated definition].") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000467") Annotation( "VHOG"^^xsd:string) Annotation( ) "Pia mater that is part of the midbrain. [Bgee_curator][VHOG]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000467") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0072528305 Kardong KV, Vertebrates: Comparative Anatomy, Function, Evolution (2006) p.639"^^xsd:string) "In fishes, the meninges consist of a single membrane, the primitive meninx, wrapped around the brain and spinal cord. With the adoption of terrestrial life, the meninges doubled. In amphibians, reptiles, and birds, the meninges include a thick outer dura mater derived from mesoderm and a thin inner secondary meninx. (...) In mammals, the dura mater persists, but division of the secondary meninx yields both the arachnoid and the pia mater from ectomesoderm.[well established][VHOG]") AnnotationAssertion( "EHDAA2:0001175") AnnotationAssertion( "EMAPA:17794") AnnotationAssertion( "MA:0001061") AnnotationAssertion( "RETIRED_EHDAA2:0001110") AnnotationAssertion( "VHOG:0000467") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "midbrain pia mater of neuraxis") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "pia mater of midbrain") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "pia mater of neuraxis of midbrain") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "VHOG:0000467") "mesencephalon pia mater") AnnotationAssertion( "UBERON:0003551") AnnotationAssertion(rdfs:label "midbrain pia mater") SubClassOf( ) SubClassOf( ) # Class: (telencephalon pia mater) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A pia mater that is part of a telencephalon [Automatically generated definition].") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000476") Annotation( "VHOG"^^xsd:string) Annotation( ) "Pia mater that is part of the telencephalon. [Bgee_curator][VHOG]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000476") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0072528305 Kardong KV, Vertebrates: Comparative Anatomy, Function, Evolution (2006) p.639"^^xsd:string) "In fishes, the meninges consist of a single membrane, the primitive meninx, wrapped around the brain and spinal cord. With the adoption of terrestrial life, the meninges doubled. In amphibians, reptiles, and birds, the meninges include a thick outer dura mater derived from mesoderm and a thin inner secondary meninx. (...) In mammals, the dura mater persists, but division of the secondary meninx yields both the arachnoid and the pia mater from ectomesoderm.[well established][VHOG]") AnnotationAssertion( "EHDAA2:0001992") AnnotationAssertion( "EMAPA:17777") AnnotationAssertion( "MA:0000982") AnnotationAssertion( "VHOG:0000476") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "pia mater of neuraxis of telencephalon") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "pia mater of telencephalon") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "telencephalon pia mater of neuraxis") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003552") AnnotationAssertion(rdfs:label "telencephalon pia mater") SubClassOf( ) SubClassOf( ) # Class: (diencephalon pia mater) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A pia mater that is part of a diencephalon [Automatically generated definition].") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000475") Annotation( "VHOG"^^xsd:string) Annotation( ) "Pia mater that is part of the diencephalon. [Bgee_curator][VHOG]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000475") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0072528305 Kardong KV, Vertebrates: Comparative Anatomy, Function, Evolution (2006) p.639"^^xsd:string) "In fishes, the meninges consist of a single membrane, the primitive meninx, wrapped around the brain and spinal cord. With the adoption of terrestrial life, the meninges doubled. In amphibians, reptiles, and birds, the meninges include a thick outer dura mater derived from mesoderm and a thin inner secondary meninx. (...) In mammals, the dura mater persists, but division of the secondary meninx yields both the arachnoid and the pia mater from ectomesoderm.[well established][VHOG]") AnnotationAssertion( "EHDAA2:0000400") AnnotationAssertion( "EMAPA:17767") AnnotationAssertion( "MA:0000829") AnnotationAssertion( "VHOG:0000475") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "between brain pia mater") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "between brain pia mater of neuraxis") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "diencephalon pia mater of neuraxis") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "interbrain pia mater") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "interbrain pia mater of neuraxis") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mature diencephalon pia mater") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mature diencephalon pia mater of neuraxis") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "pia mater of between brain") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "pia mater of diencephalon") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "pia mater of interbrain") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "pia mater of mature diencephalon") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "pia mater of neuraxis of between brain") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "pia mater of neuraxis of diencephalon") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "pia mater of neuraxis of interbrain") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "pia mater of neuraxis of mature diencephalon") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003553") AnnotationAssertion(rdfs:label "diencephalon pia mater") SubClassOf( ) SubClassOf( ) # Class: (hindbrain pia mater) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A pia mater that is part of a hindbrain [Automatically generated definition].") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000466") Annotation( "VHOG"^^xsd:string) Annotation( ) "Pia mater that is part of the hindbrain. [Bgee_curator][VHOG]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000466") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0072528305 Kardong KV, Vertebrates: Comparative Anatomy, Function, Evolution (2006) p.639"^^xsd:string) "In fishes, the meninges consist of a single membrane, the primitive meninx, wrapped around the brain and spinal cord. With the adoption of terrestrial life, the meninges doubled. In amphibians, reptiles, and birds, the meninges include a thick outer dura mater derived from mesoderm and a thin inner secondary meninx. (...) In mammals, the dura mater persists, but division of the secondary meninx yields both the arachnoid and the pia mater from ectomesoderm.[well established][VHOG]") AnnotationAssertion( "EHDAA2:0000772") AnnotationAssertion( "EMAPA:17786") AnnotationAssertion( "MA:0000990") AnnotationAssertion( "VHOG:0000466") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "hindbrain pia mater of neuraxis") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "pia mater of hindbrain") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "pia mater of neuraxis of hindbrain") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "VHOG:0000466") "rhombencephalon pia mater") AnnotationAssertion( "UBERON:0003554") AnnotationAssertion(rdfs:label "hindbrain pia mater") SubClassOf( ) SubClassOf( ) # Class: (spinal cord pia mater) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A pia mater that is part of a spinal cord [Automatically generated definition].") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000468") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( ) "The innermost of the three mammalian meninges covering the brain and spinal cord. [TFD][VHOG]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000468") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0072528305 Kardong KV, Vertebrates: Comparative Anatomy, Function, Evolution (2006) p.639"^^xsd:string) "In fishes, the meninges consist of a single membrane, the primitive meninx, wrapped around the brain and spinal cord. With the adoption of terrestrial life, the meninges doubled. In amphibians, reptiles, and birds, the meninges include a thick outer dura mater derived from mesoderm and a thin inner secondary meninx. (...) In mammals, the dura mater persists, but division of the secondary meninx yields both the arachnoid and the pia mater from ectomesoderm.[well established][VHOG]") AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0001896") AnnotationAssertion( "EMAPA:17807") AnnotationAssertion( "MA:0001133") AnnotationAssertion( "NCIT:C49800") AnnotationAssertion(Annotation( "ncithesaurus:Spinal_Cord_Pia_Mater") "UMLS:C1710148") AnnotationAssertion( "VHOG:0000468") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "pia mater of neuraxis of spinal cord") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "pia mater of spinal cord") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "spinal cord pia mater of neuraxis") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003555") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "spinal cord pia mater") SubClassOf( ) SubClassOf( ) # Class: (forebrain arachnoid mater) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An arachnoid mater that is part of a forebrain [Automatically generated definition].") AnnotationAssertion( "EMAPA:17765") AnnotationAssertion( "EMAPA:17775") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37544") AnnotationAssertion( "MA:0000884") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "arachnoid mater of forebrain") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "arachnoid mater of neuraxis of forebrain") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "arachnoid of forebrain") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "forebrain arachnoid") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "forebrain arachnoid mater of neuraxis") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003556") AnnotationAssertion(rdfs:label "forebrain arachnoid mater") SubClassOf( ) SubClassOf( ) # Class: (midbrain arachnoid mater) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An arachnoid mater that is part of a midbrain [Automatically generated definition].") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000233") Annotation( "VHOG"^^xsd:string) Annotation( ) "Arachnoid mater that is part of the midbrain. [Bgee_curator][VHOG]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000233") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0072528305 Kardong KV, Vertebrates: Comparative Anatomy, Function, Evolution (2006) p.639"^^xsd:string) "In fishes, the meninges consist of a single membrane, the primitive meninx, wrapped around the brain and spinal cord. With the adoption of terrestrial life, the meninges doubled. In amphibians, reptiles, and birds, the meninges include a thick outer dura mater derived from mesoderm and a thin inner secondary meninx. (...) In mammals, the dura mater persists, but division of the secondary meninx yields both the arachnoid and the pia mater from ectomesoderm.[well established][VHOG]") AnnotationAssertion( "EMAPA:17792") AnnotationAssertion( "MA:0001059") AnnotationAssertion( "VHOG:0000233") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "arachnoid mater of midbrain") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "arachnoid mater of neuraxis of midbrain") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "arachnoid of midbrain") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "midbrain arachnoid") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "midbrain arachnoid mater of neuraxis") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "VHOG:0000233") "mesencephalon arachnoid mater") AnnotationAssertion( "UBERON:0003557") AnnotationAssertion(rdfs:label "midbrain arachnoid mater") SubClassOf( ) SubClassOf( ) # Class: (diencephalon arachnoid mater) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An arachnoid mater that is part of a diencephalon [Automatically generated definition].") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000231") Annotation( "VHOG"^^xsd:string) Annotation( ) "Arachnoid mater that is part of the diencephalon. [Bgee_curator][VHOG]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000231") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0072528305 Kardong KV, Vertebrates: Comparative Anatomy, Function, Evolution (2006) p.639"^^xsd:string) "In fishes, the meninges consist of a single membrane, the primitive meninx, wrapped around the brain and spinal cord. With the adoption of terrestrial life, the meninges doubled. In amphibians, reptiles, and birds, the meninges include a thick outer dura mater derived from mesoderm and a thin inner secondary meninx. (...) In mammals, the dura mater persists, but division of the secondary meninx yields both the arachnoid and the pia mater from ectomesoderm.[well established][VHOG]") AnnotationAssertion( "EMAPA:17765") AnnotationAssertion( "MA:0000827") AnnotationAssertion( "VHOG:0000231") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "arachnoid mater of between brain") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "arachnoid mater of diencephalon") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "arachnoid mater of interbrain") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "arachnoid mater of mature diencephalon") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "arachnoid mater of neuraxis of between brain") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "arachnoid mater of neuraxis of diencephalon") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "arachnoid mater of neuraxis of interbrain") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "arachnoid mater of neuraxis of mature diencephalon") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "arachnoid of between brain") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "arachnoid of diencephalon") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "arachnoid of interbrain") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "arachnoid of mature diencephalon") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "between brain arachnoid") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "between brain arachnoid mater") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "between brain arachnoid mater of neuraxis") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "diencephalon arachnoid") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "diencephalon arachnoid mater of neuraxis") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "interbrain arachnoid") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "interbrain arachnoid mater") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "interbrain arachnoid mater of neuraxis") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mature diencephalon arachnoid") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mature diencephalon arachnoid mater") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mature diencephalon arachnoid mater of neuraxis") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003558") AnnotationAssertion(rdfs:label "diencephalon arachnoid mater") SubClassOf( ) SubClassOf( ) # Class: (hindbrain arachnoid mater) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An arachnoid mater that is part of a hindbrain [Automatically generated definition].") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000236") Annotation( "VHOG"^^xsd:string) Annotation( ) "Arachnoid mater that is part of the hindbrain. [Bgee_curator][VHOG]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000236") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0072528305 Kardong KV, Vertebrates: Comparative Anatomy, Function, Evolution (2006) p.639"^^xsd:string) "In fishes, the meninges consist of a single membrane, the primitive meninx, wrapped around the brain and spinal cord. With the adoption of terrestrial life, the meninges doubled. In amphibians, reptiles, and birds, the meninges include a thick outer dura mater derived from mesoderm and a thin inner secondary meninx. (...) In mammals, the dura mater persists, but division of the secondary meninx yields both the arachnoid and the pia mater from ectomesoderm.[well established][VHOG]") AnnotationAssertion( "EMAPA:17784") AnnotationAssertion( "MA:0000988") AnnotationAssertion( "VHOG:0000236") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "arachnoid mater of hindbrain") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "arachnoid mater of neuraxis of hindbrain") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "arachnoid of hindbrain") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "hindbrain arachnoid") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "hindbrain arachnoid mater of neuraxis") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "VHOG:0000236") "rhombencephalon arachnoid mater") AnnotationAssertion( "UBERON:0003559") AnnotationAssertion(rdfs:label "hindbrain arachnoid mater") SubClassOf( ) SubClassOf( ) # Class: (spinal cord arachnoid mater) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An arachnoid mater that is part of a spinal cord [Automatically generated definition].") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000234") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( ) "The middle membrane of the three mammalian meninges covering the brain and spinal cord. [TFD][VHOG]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000234") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0072528305 Kardong KV, Vertebrates: Comparative Anatomy, Function, Evolution (2006) p.639"^^xsd:string) "In fishes, the meninges consist of a single membrane, the primitive meninx, wrapped around the brain and spinal cord. With the adoption of terrestrial life, the meninges doubled. In amphibians, reptiles, and birds, the meninges include a thick outer dura mater derived from mesoderm and a thin inner secondary meninx. (...) In mammals, the dura mater persists, but division of the secondary meninx yields both the arachnoid and the pia mater from ectomesoderm.[well established][VHOG]") AnnotationAssertion( "EMAPA:17805") AnnotationAssertion( "MA:0001131") AnnotationAssertion( "VHOG:0000234") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "arachnoid mater of neuraxis of spinal cord") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "arachnoid mater of spinal cord") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "arachnoid of spinal cord") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "spinal cord arachnoid") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "spinal cord arachnoid mater of neuraxis") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003560") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "spinal cord arachnoid mater") SubClassOf( ) SubClassOf( ) # Class: (forebrain dura mater) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A dura mater that is part of a forebrain.") AnnotationAssertion( "EMAPA:17766") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37545") AnnotationAssertion( "MA:0000885") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "dura mater of forebrain") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "dura mater of neuraxis of forebrain") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "forebrain dura mater of neuraxis") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003561") AnnotationAssertion(rdfs:label "forebrain dura mater") SubClassOf( ) SubClassOf( ) # Class: (midbrain dura mater) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A dura mater that is part of a midbrain [Automatically generated definition].") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000410") Annotation( "VHOG"^^xsd:string) Annotation( ) "Dura mater that is part of the midbrain. [Bgee_curator][VHOG]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000410") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0072528305 Kardong KV, Vertebrates: Comparative Anatomy, Function, Evolution (2006) p.639"^^xsd:string) "In fishes, the meninges consist of a single membrane, the primitive meninx, wrapped around the brain and spinal cord. With the adoption of terrestrial life, the meninges doubled. In amphibians, reptiles, and birds, the meninges include a thick outer dura mater derived from mesoderm and a thin inner secondary meninx. (...) In mammals, the dura mater persists, but division of the secondary meninx yields both the arachnoid and the pia mater from ectomesoderm.[well established][VHOG]") AnnotationAssertion( "EMAPA:17793") AnnotationAssertion( "MA:0001060") AnnotationAssertion( "VHOG:0000410") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "dura mater of midbrain") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "dura mater of neuraxis of midbrain") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "midbrain dura mater of neuraxis") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "VHOG:0000410") "mesencephalon dura mater") AnnotationAssertion( "UBERON:0003562") AnnotationAssertion(rdfs:label "midbrain dura mater") SubClassOf( ) SubClassOf( ) # Class: (telencephalon dura mater) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A dura mater that is part of a telencephalon [Automatically generated definition].") AnnotationAssertion( "EMAPA:17776") AnnotationAssertion( "MA:0000981") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "dura mater of neuraxis of telencephalon") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "dura mater of telencephalon") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "telencephalon dura mater of neuraxis") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003563") AnnotationAssertion(rdfs:label "telencephalon dura mater") SubClassOf( ) SubClassOf( ) # Class: (diencephalon dura mater) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A dura mater that is part of a diencephalon [Automatically generated definition].") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000258") Annotation( "VHOG"^^xsd:string) Annotation( ) "Dura mater that is part of the diencephalon. [Bgee_curator][VHOG]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000258") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0072528305 Kardong KV, Vertebrates: Comparative Anatomy, Function, Evolution (2006) p.639"^^xsd:string) "In fishes, the meninges consist of a single membrane, the primitive meninx, wrapped around the brain and spinal cord. With the adoption of terrestrial life, the meninges doubled. In amphibians, reptiles, and birds, the meninges include a thick outer dura mater derived from mesoderm and a thin inner secondary meninx. (...) In mammals, the dura mater persists, but division of the secondary meninx yields both the arachnoid and the pia mater from ectomesoderm.[well established][VHOG]") AnnotationAssertion( "EMAPA:17766") AnnotationAssertion( "MA:0000828") AnnotationAssertion( "VHOG:0000258") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "between brain dura mater") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "between brain dura mater of neuraxis") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "diencephalon dura mater of neuraxis") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "dura mater of between brain") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "dura mater of diencephalon") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "dura mater of interbrain") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "dura mater of mature diencephalon") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "dura mater of neuraxis of between brain") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "dura mater of neuraxis of diencephalon") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "dura mater of neuraxis of interbrain") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "dura mater of neuraxis of mature diencephalon") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "interbrain dura mater") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "interbrain dura mater of neuraxis") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mature diencephalon dura mater") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mature diencephalon dura mater of neuraxis") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003564") AnnotationAssertion(rdfs:label "diencephalon dura mater") SubClassOf( ) SubClassOf( ) # Class: (hindbrain dura mater) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A dura mater that is part of a hindbrain [Automatically generated definition].") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000409") Annotation( "VHOG"^^xsd:string) Annotation( ) "Dura mater that is part of the hindbrain. [Bgee_curator][VHOG]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000409") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0072528305 Kardong KV, Vertebrates: Comparative Anatomy, Function, Evolution (2006) p.639"^^xsd:string) "In fishes, the meninges consist of a single membrane, the primitive meninx, wrapped around the brain and spinal cord. With the adoption of terrestrial life, the meninges doubled. In amphibians, reptiles, and birds, the meninges include a thick outer dura mater derived from mesoderm and a thin inner secondary meninx. (...) In mammals, the dura mater persists, but division of the secondary meninx yields both the arachnoid and the pia mater from ectomesoderm.[well established][VHOG]") AnnotationAssertion( "EMAPA:17785") AnnotationAssertion( "MA:0000989") AnnotationAssertion( "VHOG:0000409") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "dura mater of hindbrain") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "dura mater of neuraxis of hindbrain") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "hindbrain dura mater of neuraxis") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "VHOG:0000409") "rhombencephalon dura mater") AnnotationAssertion( "UBERON:0003565") AnnotationAssertion(rdfs:label "hindbrain dura mater") SubClassOf( ) SubClassOf( ) # Class: (head connective tissue) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A portion of connective tissue that is part of a head [Automatically generated definition].") AnnotationAssertion( "EMAPA:16098") AnnotationAssertion( "MA:0000577") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "adult head connective tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "adult head portion of connective tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "adult head textus connectivus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "connective tissue of adult head") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "connective tissue of head") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "head portion of connective tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "head textus connectivus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "portion of connective tissue of adult head") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "portion of connective tissue of head") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "textus connectivus of adult head") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "textus connectivus of head") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003566") AnnotationAssertion(rdfs:label "head connective tissue") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (abdomen connective tissue) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A portion of connective tissue that is part of an abdomen [Automatically generated definition].") AnnotationAssertion( "MA:0000519") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "abdomen portion of connective tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "abdomen textus connectivus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "connective tissue of abdomen") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "portion of connective tissue of abdomen") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "textus connectivus of abdomen") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003567") AnnotationAssertion(rdfs:label "abdomen connective tissue") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (neck connective tissue) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A portion of connective tissue that is part of a neck [Automatically generated definition].") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37250") AnnotationAssertion( "MA:0000585") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "connective tissue of neck") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "connective tissue of neck (volume)") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "neck (volume) connective tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "neck (volume) portion of connective tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "neck (volume) textus connectivus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "neck portion of connective tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "neck textus connectivus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "portion of connective tissue of neck") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "portion of connective tissue of neck (volume)") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "textus connectivus of neck") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "textus connectivus of neck (volume)") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003568") AnnotationAssertion(rdfs:label "neck connective tissue") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (leg connective tissue) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A portion of connective tissue that is part of a leg [Automatically generated definition].") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37324") AnnotationAssertion( "MA:0000671") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "connective tissue of leg") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "leg portion of connective tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "leg textus connectivus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "portion of connective tissue of leg") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "textus connectivus of leg") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003569") AnnotationAssertion(rdfs:label "leg connective tissue") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (respiratory system connective tissue) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A portion of connective tissue that is part of a respiratory system [Automatically generated definition].") AnnotationAssertion( "EMAPA:35968") AnnotationAssertion( "EMAPA:35977") AnnotationAssertion( "MA:0001814") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "apparatus respiratorius connective tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "apparatus respiratorius portion of connective tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "apparatus respiratorius textus connectivus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "connective tissue of apparatus respiratorius") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "connective tissue of respiratory system") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "portion of connective tissue of apparatus respiratorius") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "portion of connective tissue of respiratory system") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "respiratory system portion of connective tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "respiratory system textus connectivus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "textus connectivus of apparatus respiratorius") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "textus connectivus of respiratory system") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003570") AnnotationAssertion(rdfs:label "respiratory system connective tissue") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (trachea connective tissue) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A portion of connective tissue that is part of a trachea.") AnnotationAssertion( "EMAPA:35876") AnnotationAssertion( "MA:0001853") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "connective tissue of trachea") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "connective tissue of windpipe") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003571") AnnotationAssertion(rdfs:label "trachea connective tissue") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (chest connective tissue) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A portion of connective tissue that is part of a chest [Automatically generated definition].") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37254") AnnotationAssertion( "MA:0000550") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "anterior thoracic region connective tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "anterior thoracic region portion of connective tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "anterior thoracic region textus connectivus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "anterolateral part of thorax connective tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "anterolateral part of thorax portion of connective tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "anterolateral part of thorax textus connectivus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "chest portion of connective tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "chest textus connectivus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "connective tissue of anterior thoracic region") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "connective tissue of anterolateral part of thorax") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "connective tissue of chest") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "connective tissue of front of thorax") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "front of thorax connective tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "front of thorax portion of connective tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "front of thorax textus connectivus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "portion of connective tissue of anterior thoracic region") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "portion of connective tissue of anterolateral part of thorax") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "portion of connective tissue of chest") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "portion of connective tissue of front of thorax") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "textus connectivus of anterior thoracic region") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "textus connectivus of anterolateral part of thorax") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "textus connectivus of chest") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "textus connectivus of front of thorax") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003572") AnnotationAssertion(rdfs:label "chest connective tissue") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (arm connective tissue) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A portion of connective tissue that is part of an arm [Automatically generated definition].") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37316") AnnotationAssertion( "MA:0000593") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003573") AnnotationAssertion(rdfs:label "arm connective tissue") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (elbow connective tissue) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A portion of connective tissue that is part of a elbow [Automatically generated definition].") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37318") AnnotationAssertion( "MA:0000609") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "connective tissue of cubital region") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "connective tissue of elbow") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "textus connectivus of cubital region") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003574") AnnotationAssertion(rdfs:label "elbow connective tissue") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (wrist connective tissue) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A portion of connective tissue that is part of a wrist [Automatically generated definition].") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37320") AnnotationAssertion( "MA:0000636") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "carpal region connective tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "connective tissue of carpal region") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "connective tissue of wrist") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003575") AnnotationAssertion(rdfs:label "wrist connective tissue") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (hip connective tissue) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A portion of connective tissue that is part of a hip [Automatically generated definition].") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37323") AnnotationAssertion( "MA:0000656") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "connective tissue of hip") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "connective tissue of hip region") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "connective tissue of regio coxae") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003576") AnnotationAssertion(rdfs:label "hip connective tissue") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (knee connective tissue) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A portion of connective tissue that is part of a knee [Automatically generated definition].") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37326") AnnotationAssertion( "MA:0000667") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "connective tissue of knee") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "knee portion of connective tissue") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003577") AnnotationAssertion(rdfs:label "knee connective tissue") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pedal digit connective tissue) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A portion of connective tissue that is part of a toe [Automatically generated definition].") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37330") AnnotationAssertion( "MA:0000647") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "connective tissue of digit of foot") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "connective tissue of digitus pedis") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "connective tissue of foot digit") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "connective tissue of toe") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "digitus pedis textus connectivus") AnnotationAssertion(Annotation( "MA:0000647") "foot digit connective tissue") AnnotationAssertion(Annotation( "OBOL:accepted"^^xsd:string) "hind limb digit connective tissue") AnnotationAssertion(Annotation( "NCBITaxon:9606"^^xsd:string) Annotation( "OBOL:accepted"^^xsd:string) Annotation( ) "foot digit connective tissue") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003578") AnnotationAssertion(rdfs:label "pedal digit connective tissue") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (shoulder connective tissue) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A portion of connective tissue that is part of a shoulder [Automatically generated definition].") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37315") AnnotationAssertion( "MA:0000632") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "connective tissue of shoulder") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "portion of connective tissue of shoulder") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "shoulder portion of connective tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "shoulder textus connectivus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "textus connectivus of shoulder") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003579") AnnotationAssertion(rdfs:label "shoulder connective tissue") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lower respiratory tract connective tissue) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A portion of connective tissue that is part of a lower respiratory tract [Automatically generated definition].") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37548") AnnotationAssertion( "MA:0002409") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "connective tissue of lower respiratory tract") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "lower respiratory tract portion of connective tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "lower respiratory tract textus connectivus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "portion of connective tissue of lower respiratory tract") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "textus connectivus of lower respiratory tract") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003580") AnnotationAssertion(rdfs:label "lower respiratory tract connective tissue") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (eyelid connective tissue) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A portion of connective tissue that is part of a eyelid [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37532") AnnotationAssertion( "MA:0001251") AnnotationAssertion( "NCIT:C49482") AnnotationAssertion(Annotation( "ncithesaurus:Eyelid_Connective_Tissue") "UMLS:C1707989") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "blepharon connective tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "connective tissue of blepharon") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "connective tissue of eyelid") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003581") AnnotationAssertion(rdfs:label "eyelid connective tissue") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (nasopharynx connective tissue) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A portion of connective tissue that is part of a nasopharynx [Automatically generated definition].") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37682") AnnotationAssertion( "MA:0001864") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "connective tissue of nasal part of pharynx") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "connective tissue of nasopharynx") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "connective tissue of rhinopharynx") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "nasal part of pharynx connective tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "nasal part of pharynx portion of connective tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "nasal part of pharynx textus connectivus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "nasopharynx portion of connective tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "nasopharynx textus connectivus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "portion of connective tissue of nasal part of pharynx") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "portion of connective tissue of nasopharynx") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "portion of connective tissue of rhinopharynx") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "rhinopharynx connective tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "rhinopharynx portion of connective tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "rhinopharynx textus connectivus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "textus connectivus of nasal part of pharynx") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "textus connectivus of nasopharynx") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "textus connectivus of rhinopharynx") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003582") AnnotationAssertion(rdfs:label "nasopharynx connective tissue") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (larynx connective tissue) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A portion of connective tissue that is part of a larynx [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:35471") AnnotationAssertion( "MA:0001754") AnnotationAssertion( "NCIT:C49245") AnnotationAssertion(Annotation( "ncithesaurus:Laryngeal_Connective_Tissue") "UMLS:C1708651") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "connective tissue of larynx") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "larynx portion of connective tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "larynx textus connectivus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "portion of connective tissue of larynx") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "textus connectivus of larynx") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "EMAPA:35471") "laryngeal connective tissue") AnnotationAssertion( "UBERON:0003583") AnnotationAssertion(rdfs:label "larynx connective tissue") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (mammary gland connective tissue) AnnotationAssertion(Annotation( ) Annotation( "MP:0009507") "The fibrous supportive tissue of the mammary gland.") AnnotationAssertion( "EMAPA:35537") AnnotationAssertion( "FMA:74479") AnnotationAssertion( "FMA:74483") AnnotationAssertion( "MA:0002897") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "connective tissue of lactiferous gland") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "connective tissue of lobe of breast") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "connective tissue of lobe of mammary gland") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "connective tissue of mammary gland") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "lactiferous gland connective tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "lactiferous gland portion of connective tissue") AnnotationAssertion(Annotation( ) "lactiferous gland stroma") AnnotationAssertion(Annotation( ) "mammary gland stroma") AnnotationAssertion(Annotation( ) "mammary stroma") AnnotationAssertion(Annotation( "FMA:74483") "stroma of lactiferous gland") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003584") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "mammary gland connective tissue") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (dermis connective tissue) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A portion of connective tissue that is part of a dermis [Automatically generated definition].") AnnotationAssertion( "EMAPA:36509") AnnotationAssertion( "MA:0000799") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "connective tissue of dermis") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "dermis portion of connective tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "dermis textus connectivus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "portion of connective tissue of dermis") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "textus connectivus of dermis") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003585") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "dermis connective tissue") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (trunk connective tissue) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A portion of connective tissue that is part of a trunk [Automatically generated definition].") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37252") AnnotationAssertion( "MA:0000513") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "connective tissue of torso") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "connective tissue of trunk") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "portion of connective tissue of torso") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "portion of connective tissue of trunk") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "textus connectivus of torso") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "textus connectivus of trunk") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "torso connective tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "torso portion of connective tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "torso textus connectivus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "trunk portion of connective tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "trunk textus connectivus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003586") AnnotationAssertion(rdfs:label "trunk connective tissue") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (limb connective tissue) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A portion of connective tissue that is part of a limb [Automatically generated definition].") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37313") AnnotationAssertion( "MA:0000689") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "connective tissue of limb") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "limb portion of connective tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "limb textus connectivus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "portion of connective tissue of limb") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "textus connectivus of limb") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003587") AnnotationAssertion(rdfs:label "limb connective tissue") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (forelimb connective tissue) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A portion of connective tissue that is part of a forelimb [Automatically generated definition].") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37314") AnnotationAssertion( "MA:0000613") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "connective tissue of anteriormost limb") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "connective tissue of fore limb") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "connective tissue of forelimb") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "connective tissue of superior member") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "connective tissue of upper extremity") AnnotationAssertion(Annotation( "NCBITaxon:8782"^^xsd:string) Annotation( "OBOL:automatic"^^xsd:string) Annotation( ) "wing connective tissue") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003588") AnnotationAssertion(rdfs:label "forelimb connective tissue") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (hindlimb connective tissue) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A portion of connective tissue that is part of a hindlimb [Automatically generated definition].") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37322") AnnotationAssertion( "MA:0000661") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "connective tissue of hind limb") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "connective tissue of hindlimb") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "connective tissue of inferior member") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "connective tissue of lower extremity") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "hind limb connective tissue") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003589") AnnotationAssertion(rdfs:label "hindlimb connective tissue") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (main bronchus connective tissue) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A portion of connective tissue that is part of a main bronchus [Automatically generated definition].") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37550") AnnotationAssertion( "MA:0001845") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bronchus principalis connective tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bronchus principalis portion of connective tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bronchus principalis textus connectivus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "connective tissue of bronchus principalis") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "connective tissue of main bronchus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "connective tissue of primary bronchus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "connective tissue of principal bronchus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "EMAPA:16850") "primary bronchus mesenchyme") AnnotationAssertion(Annotation( "EMAPA:16850") "principal bronchus mesenchyme") AnnotationAssertion( "UBERON:0003590") AnnotationAssertion(rdfs:label "main bronchus connective tissue") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lobar bronchus connective tissue) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A portion of connective tissue that is part of a lobar bronchus [Automatically generated definition].") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37647") AnnotationAssertion( "MA:0001841") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "connective tissue of lobar bronchus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "connective tissue of secondary bronchus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003591") AnnotationAssertion(rdfs:label "lobar bronchus connective tissue") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (bronchus connective tissue) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A portion of connective tissue that is part of a bronchus [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:32690") AnnotationAssertion( "EMAPA:35193") AnnotationAssertion( "MA:0001831") AnnotationAssertion( "NCIT:C49210") AnnotationAssertion(Annotation( "ncithesaurus:Bronchus_Connective_Tissue") "UMLS:C1707052") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bronchi connective tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bronchi portion of connective tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bronchi textus connectivus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bronchial trunk connective tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bronchial trunk portion of connective tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bronchial trunk textus connectivus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bronchus portion of connective tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bronchus textus connectivus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "connective tissue of bronchi") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "connective tissue of bronchial trunk") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "connective tissue of bronchus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "portion of connective tissue of bronchi") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "portion of connective tissue of bronchial trunk") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "portion of connective tissue of bronchus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "textus connectivus of bronchi") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "textus connectivus of bronchial trunk") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "textus connectivus of bronchus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "EMAPA:35193") "bronchial connective tissue") AnnotationAssertion(Annotation( "EMAPA:32690") "bronchial mesenchyme") AnnotationAssertion( "UBERON:0003592") AnnotationAssertion(rdfs:label "bronchus connective tissue") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (thoracic cavity connective tissue) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A portion of connective tissue that is part of a thoracic cavity [Automatically generated definition].") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37255") AnnotationAssertion( "MA:0000555") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "cavity of chest connective tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "cavity of chest portion of connective tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "cavity of chest textus connectivus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "cavity of thorax connective tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "cavity of thorax portion of connective tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "cavity of thorax textus connectivus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "chest cavity connective tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "chest cavity portion of connective tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "chest cavity textus connectivus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "connective tissue of cavity of chest") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "connective tissue of cavity of thorax") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "connective tissue of chest cavity") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "connective tissue of pectoral cavity") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "connective tissue of thoracic cavity") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "pectoral cavity connective tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "pectoral cavity portion of connective tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "pectoral cavity textus connectivus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "portion of connective tissue of cavity of chest") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "portion of connective tissue of cavity of thorax") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "portion of connective tissue of chest cavity") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "portion of connective tissue of pectoral cavity") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "portion of connective tissue of thoracic cavity") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "textus connectivus of cavity of chest") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "textus connectivus of cavity of thorax") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "textus connectivus of chest cavity") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "textus connectivus of pectoral cavity") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "textus connectivus of thoracic cavity") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "thoracic cavity portion of connective tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "thoracic cavity textus connectivus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003593") AnnotationAssertion(rdfs:label "thoracic cavity connective tissue") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pelvis connective tissue) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A portion of connective tissue that is part of a pelvis [Automatically generated definition].") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37257") AnnotationAssertion( "MA:0000533") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "connective tissue of pelvis") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "pelvis portion of connective tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "pelvis textus connectivus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "portion of connective tissue of pelvis") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "textus connectivus of pelvis") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003594") AnnotationAssertion(rdfs:label "pelvis connective tissue") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pes connective tissue) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A portion of connective tissue that is part of a foot [Automatically generated definition].") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37329") AnnotationAssertion( "MA:0000644") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "connective tissue of foot") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "connective tissue of terminal segment of free lower limb") AnnotationAssertion(Annotation( "MA:0000644") "foot connective tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) Annotation( ) "textus connectivus of pes") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003595") AnnotationAssertion(rdfs:label "pes connective tissue") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (ankle connective tissue) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A portion of connective tissue that is part of an ankle [Automatically generated definition].") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37328") AnnotationAssertion( "MA:0000639") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "connective tissue of ankle") AnnotationAssertion(Annotation( ) "tarsal region connective tissue") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003596") AnnotationAssertion(rdfs:label "ankle connective tissue") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (manual digit connective tissue) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A portion of connective tissue that is part of a finger [Automatically generated definition].") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37321") AnnotationAssertion( "MA:0000623") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "connective tissue of digit of hand") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "connective tissue of digitus manus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "connective tissue of finger") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "connective tissue of hand digit") AnnotationAssertion(Annotation( "OBOL:accepted"^^xsd:string) "fore limb digit connective tissue") AnnotationAssertion(Annotation( "MA:0000623") "hand digit connective tissue") AnnotationAssertion(Annotation( "NCBITaxon:9606"^^xsd:string) Annotation( "OBOL:accepted"^^xsd:string) Annotation( ) "hand digit connective tissue") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003597") AnnotationAssertion(rdfs:label "manual digit connective tissue") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (manus connective tissue) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A portion of connective tissue that is part of a hand [Automatically generated definition].") AnnotationAssertion( "EMAPA:35392") AnnotationAssertion( "MA:0000620") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "connective tissue of hand") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "connective tissue of terminal segment of free upper limb") AnnotationAssertion(Annotation( "MA:0000620") "hand connective tissue") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003598") AnnotationAssertion(rdfs:label "manus connective tissue") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (neck cartilage) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A cartilage that is part of a neck [Automatically generated definition].") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37251") AnnotationAssertion( "MA:0000586") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "cartilage of neck") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "cartilage of neck (volume)") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "neck (volume) cartilage") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003601") AnnotationAssertion(rdfs:label "neck cartilage") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lower respiratory tract cartilage) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A cartilage that is part of a lower respiratory tract [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37547") AnnotationAssertion( "MA:0001819") AnnotationAssertion( "NCIT:C49256") AnnotationAssertion(Annotation( "ncithesaurus:Lower_Respiratory_Tract_Cartilage") "UMLS:C1708759") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "cartilage of lower respiratory tract") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003603") AnnotationAssertion(rdfs:label "lower respiratory tract cartilage") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (trachea cartilage) AnnotationAssertion(Annotation( ) Annotation( "J:97123") Annotation( "MGI:smb"^^xsd:string) Annotation( "MP:0003120") "The ring-shaped cartilaginous structures that support the trachea.") AnnotationAssertion( "check whether to classify as part of splanchoncranium") AnnotationAssertion( "in mammals the rings are incomplete, in avians the rings are complete.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:18699") AnnotationAssertion( "EMAPA:35875") AnnotationAssertion( "FMA:7434") AnnotationAssertion( "MA:0001857") AnnotationAssertion( "NCIT:C49304") AnnotationAssertion(Annotation( "ncithesaurus:Trachea_Cartilage") "UMLS:C1710456") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "cartilage of trachea") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "cartilage of windpipe") AnnotationAssertion(Annotation( "EMAPA:18699") "cartilaginous ring of trachea") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "cartilaginous trachea cartilage") AnnotationAssertion(Annotation( "FMA:7434") "cartilago trachealis") AnnotationAssertion(Annotation( "FMA:7434") "tracheal cartilage") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "windpipe cartilage") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "cartilage of the trachea") AnnotationAssertion(Annotation( ) Annotation( ) "cartilagines tracheales") AnnotationAssertion(Annotation( ) "ring of the trachea") AnnotationAssertion( "trachea ring") AnnotationAssertion(Annotation( ) "tracheal ring") AnnotationAssertion( "UBERON:0003604") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "trachea cartilage") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/5/56/Gray952.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (eye skin gland) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A skin gland that is part of a camera-type eye [Automatically generated definition].") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37530") AnnotationAssertion( "MA:0002451") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "camera-type eye skin gland") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "camera-type eye skin glands") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "camera-type eye skin glands set") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "skin gland of camera-type eye") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "skin gland of vertebrate eye") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "skin glands of camera-type eye") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "skin glands of vertebrate eye") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "skin glands set of camera-type eye") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "skin glands set of vertebrate eye") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "vertebrate eye skin gland") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "vertebrate eye skin glands") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "vertebrate eye skin glands set") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003605") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "eye skin gland") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (limb long bone) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A long bone that is part of a limb [Automatically generated definition].") AnnotationAssertion( "EMAPA:35495") AnnotationAssertion( "MA:0000298") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "long bone of limb") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003606") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "limb long bone") SubClassOf( ) SubClassOf( ) # Class: (forelimb long bone) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A long bone that is part of a forelimb [Automatically generated definition].") AnnotationAssertion( "EMAPA:35350") AnnotationAssertion( "MA:0000299") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "anteriormost limb long bone") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "fore limb long bone") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "long bone of anteriormost limb") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "long bone of fore limb") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "long bone of forelimb") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "long bone of superior member") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "long bone of upper extremity") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "superior member long bone") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "upper extremity long bone") AnnotationAssertion(Annotation( "NCBITaxon:8782"^^xsd:string) Annotation( "OBOL:automatic"^^xsd:string) Annotation( ) "wing long bone") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003607") AnnotationAssertion(rdfs:label "forelimb long bone") SubClassOf( ) SubClassOf( ) # Class: (hindlimb long bone) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A long bone that is part of a hindlimb [Automatically generated definition].") AnnotationAssertion( "EMAPA:35403") AnnotationAssertion( "MA:0000300") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "hind limb long bone") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "inferior member long bone") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "long bone of hind limb") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "long bone of hindlimb") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "long bone of inferior member") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "long bone of lower extremity") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "lower extremity long bone") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003608") AnnotationAssertion(rdfs:label "hindlimb long bone") SubClassOf( ) SubClassOf( ) # Class: (aorta elastic tissue) AnnotationAssertion(Annotation( "MP:0009862") "The dense connective tissue which contains predominantly elastic fibers and is found in the tunica media of the aorta wall.") AnnotationAssertion( "MA:0002859") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "adult aorta elastic connective tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "adult aorta elastic tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "adult aorta textus connectivus elasticus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "aorta elastic connective tissue") AnnotationAssertion(Annotation( "MP:0009862") "aorta elastic lamina") AnnotationAssertion(Annotation( "MP:0009862") Annotation( ) "aorta elastic laminae") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "aorta textus connectivus elasticus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "dorsal aorta elastic connective tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "dorsal aorta elastic tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "dorsal aorta textus connectivus elasticus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "elastic connective tissue of adult aorta") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "elastic connective tissue of aorta") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "elastic connective tissue of dorsal aorta") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "elastic connective tissue of trunk of aortic tree") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "elastic tissue of adult aorta") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "elastic tissue of aorta") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "elastic tissue of dorsal aorta") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "elastic tissue of trunk of aortic tree") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "textus connectivus elasticus of adult aorta") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "textus connectivus elasticus of aorta") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "textus connectivus elasticus of dorsal aorta") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "textus connectivus elasticus of trunk of aortic tree") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "trunk of aortic tree elastic connective tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "trunk of aortic tree elastic tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "trunk of aortic tree textus connectivus elasticus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003609") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "aorta elastic tissue") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (heart elastic tissue) AnnotationAssertion(Annotation( "MP:0009863") "The type of heart connective tissue found in the endocardial layer that consists mainly of elastic fibers.") AnnotationAssertion( "MA:0002858") AnnotationAssertion(Annotation( "MP:0009863") "cardiac elastic tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "elastic connective tissue of heart") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "elastic tissue of heart") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "heart elastic connective tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "heart textus connectivus elasticus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "textus connectivus elasticus of heart") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003610") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "heart elastic tissue") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (respiratory system elastic tissue) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An elastic tissue that is part of a respiratory system [Automatically generated definition].") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37579") AnnotationAssertion( "MA:0001820") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "apparatus respiratorius elastic connective tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "apparatus respiratorius elastic tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "apparatus respiratorius textus connectivus elasticus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "elastic connective tissue of apparatus respiratorius") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "elastic connective tissue of respiratory system") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "elastic tissue of apparatus respiratorius") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "elastic tissue of respiratory system") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "respiratory system elastic connective tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "respiratory system textus connectivus elasticus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "textus connectivus elasticus of apparatus respiratorius") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "textus connectivus elasticus of respiratory system") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003611") AnnotationAssertion(rdfs:label "respiratory system elastic tissue") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (cardiovascular system elastic tissue) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An elastic tissue that is part of a circulatory system [Automatically generated definition].") AnnotationAssertion( "MA:0002857") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "cardiovascular system elastic connective tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "cardiovascular system textus connectivus elasticus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "circulatory system elastic connective tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "circulatory system elastic tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "circulatory system textus connectivus elasticus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "elastic connective tissue of cardiovascular system") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "elastic connective tissue of circulatory system") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "elastic tissue of cardiovascular system") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "elastic tissue of circulatory system") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "textus connectivus elasticus of cardiovascular system") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "textus connectivus elasticus of circulatory system") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003613") AnnotationAssertion(rdfs:label "cardiovascular system elastic tissue") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (blood vessel elastic tissue) AnnotationAssertion(Annotation( ) Annotation( ) "Elastic tissue layer that lines a blood vessel layer.") AnnotationAssertion(Annotation( "MP:0006083") "elastic lamina") AnnotationAssertion(Annotation( "MP:0006083") Annotation( ) "elastic laminae") AnnotationAssertion( "EMAPA:36300") AnnotationAssertion( "MA:0002856") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "blood vessel elastic connective tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "blood vessel textus connectivus elasticus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "elastic connective tissue of blood vessel") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "elastic tissue of blood vessel") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "textus connectivus elasticus of blood vessel") AnnotationAssertion(Annotation( ) "vascular elastic lamina") AnnotationAssertion(Annotation( ) Annotation( ) "vascular elastic laminae") AnnotationAssertion(Annotation( "MP:0006083") "vascular elastic tissue") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003614") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "blood vessel elastic tissue") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lung elastic tissue) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "Elastic tissue that is part of a lung [Automatically generated definition].") AnnotationAssertion( "MA:0002860") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "elastic connective tissue of lung") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "elastic tissue of lung") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "lung elastic connective tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "lung textus connectivus elasticus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "textus connectivus elasticus of lung") AnnotationAssertion(Annotation( ) "pulmonary elastic fiber") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003615") AnnotationAssertion(rdfs:label "lung elastic tissue") SubClassOf( ) SubClassOf( ) # Class: (bronchus elastic tissue) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An elastic tissue that is part of a bronchus [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( "MA:0001838") AnnotationAssertion( "NCIT:C49211") AnnotationAssertion(Annotation( "ncithesaurus:Bronchus_Elastic_Tissue") "UMLS:C1707053") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bronchi elastic connective tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bronchi elastic tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bronchi textus connectivus elasticus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bronchial trunk elastic connective tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bronchial trunk elastic tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bronchial trunk textus connectivus elasticus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bronchus elastic connective tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bronchus textus connectivus elasticus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "elastic connective tissue of bronchi") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "elastic connective tissue of bronchial trunk") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "elastic connective tissue of bronchus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "elastic tissue of bronchi") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "elastic tissue of bronchial trunk") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "elastic tissue of bronchus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "textus connectivus elasticus of bronchi") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "textus connectivus elasticus of bronchial trunk") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "textus connectivus elasticus of bronchus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003616") AnnotationAssertion(rdfs:label "bronchus elastic tissue") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (trachea elastic tissue) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An elastic tissue that is part of a trachea [Automatically generated definition].") AnnotationAssertion( "MA:0001861") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "cartilaginous trachea elastic connective tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "cartilaginous trachea elastic tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "cartilaginous trachea textus connectivus elasticus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "elastic connective tissue of cartilaginous trachea") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "elastic connective tissue of vertebrate trachea") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "elastic connective tissue of windpipe") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "elastic tissue of cartilaginous trachea") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "elastic tissue of vertebrate trachea") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "elastic tissue of windpipe") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "textus connectivus elasticus of cartilaginous trachea") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "textus connectivus elasticus of vertebrate trachea") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "textus connectivus elasticus of windpipe") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "vertebrate trachea elastic connective tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "vertebrate trachea elastic tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "vertebrate trachea textus connectivus elasticus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "windpipe elastic connective tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "windpipe elastic tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "windpipe textus connectivus elasticus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003617") AnnotationAssertion(rdfs:label "trachea elastic tissue") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (aorta tunica media) AnnotationAssertion(Annotation( "MP:0009873") "The middle layer of the aorta wall, containing the smooth muscle layer and elastic fibers.") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:35138") AnnotationAssertion( "FMA:74433") AnnotationAssertion( "MA:0002903") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "adult aorta tunica media") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "dorsal aorta tunica media") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "trunk of aortic tree tunica media") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "tunica media of adult aorta") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "tunica media of aorta") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "tunica media of dorsal aorta") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "tunica media of trunk of aortic tree") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003618") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "aorta tunica media") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (aorta tunica intima) AnnotationAssertion(Annotation( "MP:0009872") "The innermost layer of the aorta, containing the endothelium and an inner elastic membrane.") AnnotationAssertion( ) AnnotationAssertion( "BTO:0005553") AnnotationAssertion( "EMAPA:35137") AnnotationAssertion( "FMA:74419") AnnotationAssertion( "MA:0002904") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "adult aorta tunica intima") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "dorsal aorta tunica intima") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "trunk of aortic tree tunica intima") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "tunica intima of adult aorta") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "tunica intima of aorta") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "tunica intima of dorsal aorta") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "tunica intima of trunk of aortic tree") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003619") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "aorta tunica intima") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (manual digit 1 phalanx) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A phalanx that is part of a hand digit 1 [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:19113") AnnotationAssertion( "FMA:35477") AnnotationAssertion( "MA:0001389") AnnotationAssertion( "NCIT:C52777") AnnotationAssertion(Annotation( "ncithesaurus:Hand_Digit_1_Phalanx") "UMLS:C1711344") AnnotationAssertion(Annotation( "OBOL:accepted"^^xsd:string) "fore limb digit 1 phalanx") AnnotationAssertion(Annotation( "MA:0001389") "hand digit 1 phalanx") AnnotationAssertion(Annotation( ) Annotation( ) "manual digit I phalanx") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "phalanx of hand digit 1") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "phalanx of thumb") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "thumb phalanx") AnnotationAssertion(Annotation( "NCBITaxon:9606"^^xsd:string) Annotation( "OBOL:accepted"^^xsd:string) Annotation( ) "hand digit 1 phalanx") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003620") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "manual digit 1 phalanx") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (manual digit 2) AnnotationAssertion(Annotation( ) "2nd digit of the manus.") AnnotationAssertion( ) AnnotationAssertion( "indicis") AnnotationAssertion( "Anurans lack manual digit 1, so manual digit 2 is the digit after the prepollex (Phenotype RCN Oct 2012)") AnnotationAssertion(Annotation( "NCBITaxon:8782") Annotation( "UBERON:0012261") Annotation( ) Annotation( "PhenoscapeRCN") "This class represents the standard tetrapod configuration. Wagner proposes that avian digits I,II,III develop from C2,C3,C4. To support this scheme we have separate classes representing the avian digits (here called alula, manual digit, major digit).") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010640") AnnotationAssertion( "EHDAA2:0000517") AnnotationAssertion( "EMAPA:17432") AnnotationAssertion( "FMA:24946") AnnotationAssertion( "MA:0000455") AnnotationAssertion( "NCIT:C52835") AnnotationAssertion(Annotation( "ncithesaurus:Hand_Digit_2") "UMLS:C0230388") AnnotationAssertion( "2nd digit of hand") AnnotationAssertion( "2nd finger") AnnotationAssertion(Annotation( "EMAPA:17432") "digit 2 of fore-paw") AnnotationAssertion(Annotation( "EHDAA2:0000517") "finger 2") AnnotationAssertion(Annotation( "AAO:0010640") "fore digit II") AnnotationAssertion(Annotation( "OBOL:accepted"^^xsd:string) "fore limb digit 2") AnnotationAssertion(Annotation( "MA:0000455") "hand digit 2") AnnotationAssertion(Annotation( ) Annotation( ) "manual digit II") AnnotationAssertion(Annotation( "FMA:24946") "second digit of hand") AnnotationAssertion( "second finger") AnnotationAssertion(Annotation( "NCBITaxon:9606"^^xsd:string) Annotation( "OBOL:accepted"^^xsd:string) Annotation( ) "hand digit 2") AnnotationAssertion( "index finger") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003622") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "manual digit 2") AnnotationAssertion( "Index:finger.JPG"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (manual digit 3) AnnotationAssertion(Annotation( ) "3rd digit of the manus.") AnnotationAssertion( ) AnnotationAssertion(Annotation( "NCBITaxon:8782") Annotation( "UBERON:0012262") Annotation( ) Annotation( "PhenoscapeRCN") "This class represents the standard tetrapod configuration. Wagner proposes that avian digits I,II,III develop from C2,C3,C4. To support this scheme we have separate classes representing the avian digits (here called alula, manual digit, major digit).") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010641") AnnotationAssertion( "EHDAA2:0000523") AnnotationAssertion( "EMAPA:17435") AnnotationAssertion( "FMA:24947") AnnotationAssertion( "MA:0000456") AnnotationAssertion( "NCIT:C52836") AnnotationAssertion(Annotation( "ncithesaurus:Hand_Digit_3") "UMLS:C0230393") AnnotationAssertion( "3rd digit of hand") AnnotationAssertion( "3rd finger") AnnotationAssertion(Annotation( "EMAPA:17435") "digit 3 of fore-paw") AnnotationAssertion(Annotation( "EHDAA2:0000523") "finger 3") AnnotationAssertion(Annotation( "AAO:0010641") "fore digit III") AnnotationAssertion(Annotation( "OBOL:accepted"^^xsd:string) "fore limb digit 3") AnnotationAssertion(Annotation( "MA:0000456") "hand digit 3") AnnotationAssertion(Annotation( ) Annotation( ) "manual digit III") AnnotationAssertion(Annotation( "FMA:24947") "third digit of hand") AnnotationAssertion( "third finger") AnnotationAssertion(Annotation( "NCBITaxon:9606"^^xsd:string) Annotation( "OBOL:accepted"^^xsd:string) Annotation( ) "hand digit 3") AnnotationAssertion( "middle finger") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "digitus medius") AnnotationAssertion(Annotation( "EMAPA:17435") "long finger") AnnotationAssertion( "UBERON:0003623") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "manual digit 3") AnnotationAssertion( "Middle:finger.jpg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (manual digit 4) AnnotationAssertion(Annotation( ) "4th digit of the manus.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010642") AnnotationAssertion( "EHDAA2:0000529") AnnotationAssertion( "EMAPA:17438") AnnotationAssertion( "FMA:24948") AnnotationAssertion( "MA:0000457") AnnotationAssertion( "NCIT:C52837") AnnotationAssertion(Annotation( "ncithesaurus:Hand_Digit_4") "UMLS:C0230398") AnnotationAssertion( "4th digit of hand") AnnotationAssertion( "4th finger") AnnotationAssertion(Annotation( "EMAPA:17438") "digit 4 of fore-paw") AnnotationAssertion(Annotation( "EHDAA2:0000529") "finger 4") AnnotationAssertion(Annotation( "AAO:0010642") "fore digit IV") AnnotationAssertion(Annotation( "OBOL:accepted"^^xsd:string) "fore limb digit 4") AnnotationAssertion(Annotation( "FMA:24948") "fourth digit of hand") AnnotationAssertion( "fourth finger") AnnotationAssertion(Annotation( "MA:0000457") "hand digit 4") AnnotationAssertion(Annotation( ) Annotation( ) "manual digit IV") AnnotationAssertion(Annotation( "NCBITaxon:9606"^^xsd:string) Annotation( "OBOL:accepted"^^xsd:string) Annotation( ) "hand digit 4") AnnotationAssertion( "ring finger") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "digitus annularis") AnnotationAssertion( "UBERON:0003624") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "manual digit 4") AnnotationAssertion( "Ring:finger.JPG"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (manual digit 5) AnnotationAssertion(Annotation( ) "5th digit of the manus.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010643") AnnotationAssertion( "EHDAA2:0000535") AnnotationAssertion( "EMAPA:17441") AnnotationAssertion( "FMA:24949") AnnotationAssertion( "MA:0000458") AnnotationAssertion( "NCIT:C52838") AnnotationAssertion(Annotation( "ncithesaurus:Hand_Digit_5") "UMLS:C0230403") AnnotationAssertion( "5th digit of hand") AnnotationAssertion( "5th finger") AnnotationAssertion(Annotation( "EMAPA:17441") "digit 5 of fore-paw") AnnotationAssertion(Annotation( "FMA:24949") "fifth digit of hand") AnnotationAssertion( "fifth finger") AnnotationAssertion(Annotation( "EHDAA2:0000535") "finger 5") AnnotationAssertion(Annotation( "AAO:0010643") "fore digit V") AnnotationAssertion(Annotation( "OBOL:accepted"^^xsd:string) "fore limb digit 5") AnnotationAssertion(Annotation( "MA:0000458") "hand digit 5") AnnotationAssertion(Annotation( ) Annotation( ) "manual digit V") AnnotationAssertion(Annotation( "NCBITaxon:9606"^^xsd:string) Annotation( "OBOL:accepted"^^xsd:string) Annotation( ) "hand digit 5") AnnotationAssertion( "little finger") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "manual digitus V") AnnotationAssertion(Annotation( ) Annotation( ) "manual digitus minimus") AnnotationAssertion( "manus digiti minimi") AnnotationAssertion(Annotation( ) Annotation( ) "manus quintus") AnnotationAssertion( "UBERON:0003625") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "manual digit 5") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/e/ed/Pink.jpg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pedal digit 1) AnnotationAssertion(Annotation( ) "1st digit of the hind autopod.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010644") AnnotationAssertion( "BTO:0002349") AnnotationAssertion( "EHDAA2:0002037") AnnotationAssertion( "EMAPA:17460") AnnotationAssertion( "FMA:25047") AnnotationAssertion( "GAID:45") AnnotationAssertion( "MA:0000465") AnnotationAssertion( "MESH:D006214") AnnotationAssertion( "NCIT:C52839") AnnotationAssertion(Annotation( "ncithesaurus:Foot_Digit_1") "UMLS:C1708079") AnnotationAssertion( "VSAO:0000201") AnnotationAssertion(Annotation( "EMAPA:17460") "digit 1 of hind-paw") AnnotationAssertion( "digit 1 of pes") AnnotationAssertion(Annotation( ) "digitus primus pedis") AnnotationAssertion(Annotation( "MA:0000465") "foot digit 1") AnnotationAssertion(Annotation( "FMA:25047") "great toe") AnnotationAssertion( "hallex") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) Annotation( ) "hallux") AnnotationAssertion(Annotation( "FMA:25047") "hallux; digitus primus [I]") AnnotationAssertion( "hind digit 1") AnnotationAssertion(Annotation( "AAO:0010644") "hind digit I") AnnotationAssertion(Annotation( "OBOL:accepted"^^xsd:string) "hind limb digit 1") AnnotationAssertion( "pedal digit 1") AnnotationAssertion(Annotation( ) Annotation( ) "pedal digit I") AnnotationAssertion( "pes digit I") AnnotationAssertion( "preaxial digit of hindlimb") AnnotationAssertion(Annotation( "EHDAA2:0002037") "toe 1") AnnotationAssertion( "big toe") AnnotationAssertion(Annotation( "NCBITaxon:9606"^^xsd:string) Annotation( "OBOL:accepted"^^xsd:string) Annotation( ) "foot digit 1") AnnotationAssertion(Annotation( ) Annotation( ) "hindlimb dewclaw") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0002349") "digitus primus (I) pedis") AnnotationAssertion(Annotation( "EMAPA:17460") "first toe") AnnotationAssertion(Annotation( "EMAPA:17460") "large toe") AnnotationAssertion( "UBERON:0003631") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "pedal digit 1") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/a/ab/RightFootToes.jpg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pedal digit 2) AnnotationAssertion(Annotation( ) "2nd digit of the hind autopod.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010645") AnnotationAssertion( "BTO:0002350") AnnotationAssertion( "EHDAA2:0002042") AnnotationAssertion( "EMAPA:17463") AnnotationAssertion( "FMA:25048") AnnotationAssertion( "MA:0000466") AnnotationAssertion( "NCIT:C52840") AnnotationAssertion(Annotation( "ncithesaurus:Foot_Digit_2") "UMLS:C1708081") AnnotationAssertion( "2nd toe") AnnotationAssertion(Annotation( "EMAPA:17463") "digit 2 of hind-paw") AnnotationAssertion(Annotation( "FMA:25048") "digitus secundus [ii]") AnnotationAssertion(Annotation( "BTO:0002350") Annotation( ) "digitus secundus pedis") AnnotationAssertion(Annotation( "MA:0000466") "foot digit 2") AnnotationAssertion( "hind digit 2") AnnotationAssertion(Annotation( "AAO:0010645") "hind digit II") AnnotationAssertion(Annotation( "OBOL:accepted"^^xsd:string) "hind limb digit 2") AnnotationAssertion(Annotation( ) Annotation( ) "pedal digit II") AnnotationAssertion( "pes digit II") AnnotationAssertion(Annotation( "FMA:25048") "second digit of foot") AnnotationAssertion(Annotation( "FMA:25048") "second toe") AnnotationAssertion(Annotation( "EHDAA2:0002042") "toe 2") AnnotationAssertion(Annotation( "NCBITaxon:9606"^^xsd:string) Annotation( "OBOL:accepted"^^xsd:string) Annotation( ) "foot digit 2") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0002350") "digitus secundus (II) pedis") AnnotationAssertion( "UBERON:0003632") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "pedal digit 2") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pedal digit 3) AnnotationAssertion(Annotation( ) "3rd digit of the hind autopod.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010646") AnnotationAssertion( "BTO:0002351") AnnotationAssertion( "EHDAA2:0002047") AnnotationAssertion( "EMAPA:17466") AnnotationAssertion( "FMA:25051") AnnotationAssertion( "MA:0000467") AnnotationAssertion( "NCIT:C52841") AnnotationAssertion(Annotation( "ncithesaurus:Foot_Digit_3") "UMLS:C1708083") AnnotationAssertion( "3rd toe") AnnotationAssertion(Annotation( "EMAPA:17466") "digit 3 of hind-paw") AnnotationAssertion(Annotation( "BTO:0002351") "digitus tertius (III) pedis") AnnotationAssertion(Annotation( "FMA:25051") "digitus tertius [iii]") AnnotationAssertion(Annotation( "BTO:0002351") Annotation( ) "digitus tertius pedis") AnnotationAssertion(Annotation( "MA:0000467") "foot digit 3") AnnotationAssertion( "hind digit 3") AnnotationAssertion(Annotation( "AAO:0010646") "hind digit III") AnnotationAssertion(Annotation( "OBOL:accepted"^^xsd:string) "hind limb digit 3") AnnotationAssertion(Annotation( ) Annotation( ) "pedal digit III") AnnotationAssertion( "pes digit III") AnnotationAssertion(Annotation( "FMA:25051") "third digit of foot") AnnotationAssertion(Annotation( "FMA:25051") "third toe") AnnotationAssertion(Annotation( "EHDAA2:0002047") "toe 3") AnnotationAssertion(Annotation( "NCBITaxon:9606"^^xsd:string) Annotation( "OBOL:accepted"^^xsd:string) Annotation( ) "foot digit 3") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003633") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "pedal digit 3") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pedal digit 4) AnnotationAssertion(Annotation( ) "4th digit of the hind autopod.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010656") AnnotationAssertion( "BTO:0002352") AnnotationAssertion( "EHDAA2:0002052") AnnotationAssertion( "EMAPA:17469") AnnotationAssertion( "FMA:25052") AnnotationAssertion( "MA:0000468") AnnotationAssertion( "NCIT:C52842") AnnotationAssertion(Annotation( "ncithesaurus:Foot_Digit_4") "UMLS:C1708085") AnnotationAssertion( "4th toe") AnnotationAssertion(Annotation( "EMAPA:17469") "digit 4 of hind-paw") AnnotationAssertion(Annotation( "BTO:0002352") Annotation( ) "digitus quartis pedis") AnnotationAssertion(Annotation( "FMA:25052") "digitus quartus [iv]") AnnotationAssertion(Annotation( "MA:0000468") "foot digit 4") AnnotationAssertion(Annotation( "FMA:25052") "fourth digit of foot") AnnotationAssertion(Annotation( "FMA:25052") "fourth toe") AnnotationAssertion( "hind digit 4") AnnotationAssertion(Annotation( "AAO:0010656") "hind digit IV") AnnotationAssertion(Annotation( "OBOL:accepted"^^xsd:string) "hind limb digit 4") AnnotationAssertion(Annotation( ) Annotation( ) "pedal digit IV") AnnotationAssertion( "pes digit IV") AnnotationAssertion(Annotation( "EHDAA2:0002052") "toe 4") AnnotationAssertion(Annotation( "NCBITaxon:9606"^^xsd:string) Annotation( "OBOL:accepted"^^xsd:string) Annotation( ) "foot digit 4") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0002352") "digitus quartus (IV) pedis") AnnotationAssertion( "UBERON:0003634") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "pedal digit 4") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pedal digit 5) AnnotationAssertion(Annotation( ) Annotation( ) "5th digit of the hind autopod.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010658") AnnotationAssertion( "BTO:0002353") AnnotationAssertion( "EHDAA2:0002057") AnnotationAssertion( "EMAPA:17472") AnnotationAssertion( "FMA:25053") AnnotationAssertion( "MA:0000469") AnnotationAssertion( "NCIT:C52843") AnnotationAssertion(Annotation( "ncithesaurus:Foot_Digit_5") "UMLS:C1708087") AnnotationAssertion( "5th toe") AnnotationAssertion(Annotation( "EMAPA:17472") "digit 5 of hind-paw") AnnotationAssertion( "digitus V of pes") AnnotationAssertion(Annotation( ) Annotation( ) "digitus minimus pedis") AnnotationAssertion(Annotation( "FMA:25053") "digitus minimus; digitus quintus [v]") AnnotationAssertion(Annotation( "FMA:25053") "digitus quintus [V]") AnnotationAssertion(Annotation( "FMA:25053") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "digitus quintus [V] pedis") AnnotationAssertion( "digitus quintus of pes") AnnotationAssertion(Annotation( ) Annotation( ) "digitus quintus pedis") AnnotationAssertion(Annotation( "FMA:25053") "fifth digit of foot") AnnotationAssertion(Annotation( "FMA:25053") "fifth toe") AnnotationAssertion(Annotation( "MA:0000469") "foot digit 5") AnnotationAssertion( "hind digit 5") AnnotationAssertion(Annotation( "AAO:0010658") "hind digit V") AnnotationAssertion(Annotation( "OBOL:accepted"^^xsd:string) "hind limb digit 5") AnnotationAssertion(Annotation( ) Annotation( ) "pedal digit V") AnnotationAssertion( "pedal digitus minimus") AnnotationAssertion( "pes digit V") AnnotationAssertion(Annotation( "EHDAA2:0002057") "toe 5") AnnotationAssertion(Annotation( "NCBITaxon:9606"^^xsd:string) Annotation( "OBOL:accepted"^^xsd:string) Annotation( ) "foot digit 5") AnnotationAssertion( "little toe") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0002353") "digitus quintus (V) pedis") AnnotationAssertion( "UBERON:0003635") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "pedal digit 5") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/5/52/Gray291.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (manual digit 2 phalanx) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A phalanx that is part of a hand digit 2 [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:19115") AnnotationAssertion( "FMA:35480") AnnotationAssertion( "MA:0001390") AnnotationAssertion( "NCIT:C52776") AnnotationAssertion(Annotation( "ncithesaurus:Hand_Digit_2_Phalanx") "UMLS:C1708312") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "2 nd digit of hand digit long bone") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "2 nd digit of hand long bone of digit") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "2 nd digit of hand phalanx") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "2 nd finger digit long bone") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "2 nd finger long bone of digit") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "2 nd finger phalanx") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "digit long bone of 2 nd digit of hand") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "digit long bone of 2 nd finger") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "digit long bone of hand digit 2") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "digit long bone of second finger") AnnotationAssertion(Annotation( "OBOL:accepted"^^xsd:string) "fore limb digit 2 phalanx") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "hand digit 2 digit long bone") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "hand digit 2 long bone of digit") AnnotationAssertion(Annotation( "MA:0001390") "hand digit 2 phalanx") AnnotationAssertion(Annotation( "FMA:35480") "index finger phalanx") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "long bone of digit of 2 nd digit of hand") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "long bone of digit of 2 nd finger") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "long bone of digit of hand digit 2") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "long bone of digit of second finger") AnnotationAssertion(Annotation( ) Annotation( ) "manual digit II phalanx") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "phalanx of 2 nd digit of hand") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "phalanx of 2 nd finger") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "phalanx of hand digit 2") AnnotationAssertion(Annotation( "FMA:35480") "phalanx of index finger") AnnotationAssertion(Annotation( "OBOL:accepted"^^xsd:string) "phalanx of manual digit 2") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "phalanx of second finger") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "second finger digit long bone") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "second finger long bone of digit") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "second finger phalanx") AnnotationAssertion(Annotation( "NCBITaxon:9606"^^xsd:string) Annotation( "OBOL:accepted"^^xsd:string) Annotation( ) "hand digit 2 phalanx") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003636") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "manual digit 2 phalanx") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (manual digit 3 phalanx) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A phalanx that is part of a hand digit 3 [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:19117") AnnotationAssertion( "FMA:35483") AnnotationAssertion( "MA:0001391") AnnotationAssertion( "NCIT:C52775") AnnotationAssertion(Annotation( "ncithesaurus:Hand_Digit_3_Phalanx") "UMLS:C1708314") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "3 rd digit of hand digit long bone") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "3 rd digit of hand long bone of digit") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "3 rd digit of hand phalanx") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "3 rd finger digit long bone") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "3 rd finger long bone of digit") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "3 rd finger phalanx") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "digit long bone of 3 rd digit of hand") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "digit long bone of 3 rd finger") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "digit long bone of hand digit 3") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "digit long bone of third finger") AnnotationAssertion(Annotation( "OBOL:accepted"^^xsd:string) "fore limb digit 3 phalanx") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "hand digit 3 digit long bone") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "hand digit 3 long bone of digit") AnnotationAssertion(Annotation( "MA:0001391") "hand digit 3 phalanx") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "long bone of digit of 3 rd digit of hand") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "long bone of digit of 3 rd finger") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "long bone of digit of hand digit 3") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "long bone of digit of third finger") AnnotationAssertion(Annotation( ) Annotation( ) "manual digit III phalanx") AnnotationAssertion(Annotation( "FMA:35483") "middle finger phalanx") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "phalanx of 3 rd digit of hand") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "phalanx of 3 rd finger") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "phalanx of hand digit 3") AnnotationAssertion(Annotation( "FMA:35483") "phalanx of middle finger") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "phalanx of third finger") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "third finger digit long bone") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "third finger long bone of digit") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "third finger phalanx") AnnotationAssertion(Annotation( "NCBITaxon:9606"^^xsd:string) Annotation( "OBOL:accepted"^^xsd:string) Annotation( ) "hand digit 3 phalanx") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003637") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "manual digit 3 phalanx") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (manual digit 4 phalanx) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A phalanx that is part of a hand digit 4 [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:19119") AnnotationAssertion( "FMA:35486") AnnotationAssertion( "MA:0001392") AnnotationAssertion( "NCIT:C52774") AnnotationAssertion(Annotation( "ncithesaurus:Hand_Digit_4_Phalanx") "UMLS:C1708316") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "4 th digit of hand digit long bone") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "4 th digit of hand long bone of digit") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "4 th digit of hand phalanx") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "4 th finger digit long bone") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "4 th finger long bone of digit") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "4 th finger phalanx") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "digit long bone of 4 th digit of hand") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "digit long bone of 4 th finger") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "digit long bone of fourth finger") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "digit long bone of hand digit 4") AnnotationAssertion(Annotation( "OBOL:accepted"^^xsd:string) "fore limb digit 4 phalanx") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "fourth finger digit long bone") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "fourth finger long bone of digit") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "fourth finger phalanx") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "hand digit 4 digit long bone") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "hand digit 4 long bone of digit") AnnotationAssertion(Annotation( "MA:0001392") "hand digit 4 phalanx") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "long bone of digit of 4 th digit of hand") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "long bone of digit of 4 th finger") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "long bone of digit of fourth finger") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "long bone of digit of hand digit 4") AnnotationAssertion(Annotation( ) Annotation( ) "manual digit IV phalanx") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "phalanx of 4 th digit of hand") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "phalanx of 4 th finger") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "phalanx of fourth finger") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "phalanx of hand digit 4") AnnotationAssertion(Annotation( "FMA:35486") "phalanx of ring finger") AnnotationAssertion(Annotation( "FMA:35486") "ring finger phalanx") AnnotationAssertion(Annotation( "NCBITaxon:9606"^^xsd:string) Annotation( "OBOL:accepted"^^xsd:string) Annotation( ) "hand digit 4 phalanx") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003638") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "manual digit 4 phalanx") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (manual digit 5 phalanx) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A phalanx that is part of a hand digit 5 [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:19121") AnnotationAssertion( "FMA:35489") AnnotationAssertion( "MA:0001393") AnnotationAssertion( "NCIT:C52773") AnnotationAssertion(Annotation( "ncithesaurus:Hand_Digit_5_Phalanx") "UMLS:C1708317") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "5 th digit of hand digit long bone") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "5 th digit of hand long bone of digit") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "5 th digit of hand phalanx") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "5 th finger digit long bone") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "5 th finger long bone of digit") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "5 th finger phalanx") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "digit long bone of 5 th digit of hand") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "digit long bone of 5 th finger") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "digit long bone of fifth finger") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "digit long bone of hand digit 5") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "fifth finger digit long bone") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "fifth finger long bone of digit") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "fifth finger phalanx") AnnotationAssertion(Annotation( "OBOL:accepted"^^xsd:string) "fore limb digit 5 phalanx") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "hand digit 5 digit long bone") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "hand digit 5 long bone of digit") AnnotationAssertion(Annotation( "MA:0001393") "hand digit 5 phalanx") AnnotationAssertion(Annotation( "FMA:35489") "little finger phalanx") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "long bone of digit of 5 th digit of hand") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "long bone of digit of 5 th finger") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "long bone of digit of fifth finger") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "long bone of digit of hand digit 5") AnnotationAssertion(Annotation( ) Annotation( ) "manual digit V phalanx") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "phalanx of 5 th digit of hand") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "phalanx of 5 th finger") AnnotationAssertion( "phalanx of 5th finger") AnnotationAssertion(Annotation( "FMA:35489") "phalanx of fifth digit of hand") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "phalanx of fifth finger") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "phalanx of hand digit 5") AnnotationAssertion(Annotation( "FMA:35489") "phalanx of little finger") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "phalanx of manual digitus minimus") AnnotationAssertion(Annotation( "NCBITaxon:9606"^^xsd:string) Annotation( "OBOL:accepted"^^xsd:string) Annotation( ) "hand digit 5 phalanx") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003639") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "manual digit 5 phalanx") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pedal digit 1 phalanx) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A phalanx that is part of a foot digit 1 [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:19124") AnnotationAssertion( "FMA:32884") AnnotationAssertion( "MA:0001381") AnnotationAssertion( "NCIT:C52778") AnnotationAssertion(Annotation( "ncithesaurus:Foot_Digit_1_Phalanx") "UMLS:C1708080") AnnotationAssertion(Annotation( "FMA:32884") "big toe phalanx") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "digit long bone of foot digit 1") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "digit long bone of hallux") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "foot digit 1 digit long bone") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "foot digit 1 long bone of digit") AnnotationAssertion(Annotation( "MA:0001381") "foot digit 1 phalanx") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "hallux digit long bone") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "hallux long bone of digit") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "hallux phalanx") AnnotationAssertion(Annotation( "OBOL:accepted"^^xsd:string) "hind limb digit 1 phalanx") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "long bone of digit of foot digit 1") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "long bone of digit of hallux") AnnotationAssertion(Annotation( ) Annotation( ) "pedal digit I phalanx") AnnotationAssertion(Annotation( "FMA:32884") "phalanx of big toe") AnnotationAssertion(Annotation( "FMA:32884") "phalanx of first digit of foot") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "phalanx of foot digit 1") AnnotationAssertion(Annotation( "FMA:32884") "phalanx of great toe") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "phalanx of hallux") AnnotationAssertion(Annotation( "NCBITaxon:9606"^^xsd:string) Annotation( "OBOL:accepted"^^xsd:string) Annotation( ) "foot digit 1 phalanx") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:32884") "phalanx of first toe") AnnotationAssertion( "UBERON:0003640") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "pedal digit 1 phalanx") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pedal digit 2 phalanx) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A phalanx that is part of a foot digit 2 [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:19126") AnnotationAssertion( "FMA:32899") AnnotationAssertion( "MA:0001382") AnnotationAssertion( "NCIT:C52779") AnnotationAssertion(Annotation( "ncithesaurus:Foot_Digit_2_Phalanx") "UMLS:C1708082") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "digit long bone of foot digit 2") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "foot digit 2 digit long bone") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "foot digit 2 long bone of digit") AnnotationAssertion(Annotation( "MA:0001382") "foot digit 2 phalanx") AnnotationAssertion(Annotation( "OBOL:accepted"^^xsd:string) "hind limb digit 2 phalanx") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "long bone of digit of foot digit 2") AnnotationAssertion(Annotation( ) Annotation( ) "pedal digit II phalanx") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "phalanx of foot digit 2") AnnotationAssertion(Annotation( "FMA:32899") "phalanx of second toe") AnnotationAssertion(Annotation( "FMA:32899") "second toe phalanx") AnnotationAssertion(Annotation( "NCBITaxon:9606"^^xsd:string) Annotation( "OBOL:accepted"^^xsd:string) Annotation( ) "foot digit 2 phalanx") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003641") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "pedal digit 2 phalanx") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pedal digit 3 phalanx) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A phalanx that is part of a foot digit 3 [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:19128") AnnotationAssertion( "FMA:32900") AnnotationAssertion( "MA:0001383") AnnotationAssertion( "NCIT:C52780") AnnotationAssertion(Annotation( "ncithesaurus:Foot_Digit_3_Phalanx") "UMLS:C1708084") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "digit long bone of foot digit 3") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "foot digit 3 digit long bone") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "foot digit 3 long bone of digit") AnnotationAssertion(Annotation( "MA:0001383") "foot digit 3 phalanx") AnnotationAssertion(Annotation( "OBOL:accepted"^^xsd:string) "hind limb digit 3 phalanx") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "long bone of digit of foot digit 3") AnnotationAssertion(Annotation( ) Annotation( ) "pedal digit III phalanx") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "phalanx of foot digit 3") AnnotationAssertion(Annotation( "FMA:32900") "phalanx of third toe") AnnotationAssertion(Annotation( "FMA:32900") "third toe phalanx") AnnotationAssertion(Annotation( "NCBITaxon:9606"^^xsd:string) Annotation( "OBOL:accepted"^^xsd:string) Annotation( ) "foot digit 3 phalanx") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003642") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "pedal digit 3 phalanx") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (respiratory system arterial blood vessel) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An arterial blood vessel that is part of a respiratory system [Automatically generated definition].") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37565") AnnotationAssertion( "MA:0001800") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003643") AnnotationAssertion(rdfs:label "respiratory system arterial blood vessel") SubClassOf( ) SubClassOf( ) # Class: (kidney arterial blood vessel) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An arterial blood vessel that is part of a kidney [Automatically generated definition].") AnnotationAssertion( "EMAPA:31436") AnnotationAssertion( "MA:0002578") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "EMAPA:31436") "kidney arterial system") AnnotationAssertion( "UBERON:0003644") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "kidney arterial blood vessel") SubClassOf( ) SubClassOf( ) # Class: (metacarpal bone of digit 1) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A metacarpal bone that distally_connected_to a proximal phalanx of manual digit 1.") AnnotationAssertion(Annotation( ) "The first metacarpal bone or the metacarpal bone of the thumb is the first bone of the thumb. It is connected to the trapezium of the carpus at the first carpometacarpal joint and to the proximal thumb phalanx at the first metacarpophalangeal joint[Wikipedia:First_metacarpal_bone].") AnnotationAssertion( "1"^^xsd:nonNegativeInteger) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010616") AnnotationAssertion( "EMAPA:19112") AnnotationAssertion( "FMA:23899") AnnotationAssertion( "MA:0001364") AnnotationAssertion( "NCIT:C52796") AnnotationAssertion(Annotation( "ncithesaurus:Metacarpal_Bone_Digit_1") "UMLS:C1708987") AnnotationAssertion( "finger 1 metacarpus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "first digit of hand metacarpal") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "first digit of hand metacarpal bone") AnnotationAssertion(Annotation( "FMA:23899") "first metacarpal bone") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "hand digit 1 metacarpal") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "hand digit 1 metacarpal bone") AnnotationAssertion( "manual digit 1 metacarpus") AnnotationAssertion( "metacarpal 1") AnnotationAssertion(Annotation( "FMA:23899") "metacarpal I") AnnotationAssertion(Annotation( "MA:0001364") "metacarpal bone digit 1") AnnotationAssertion(Annotation( ) Annotation( ) "metacarpal bone of digit I") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "metacarpal bone of first digit of hand") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "metacarpal bone of hand digit 1") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "metacarpal bone of thumb") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "metacarpal of first digit of hand") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "metacarpal of hand digit 1") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "metacarpal of thumb") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "thumb metacarpal") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "thumb metacarpal bone") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "EMAPA:19112") "forelimb digit 1 metacarpus") AnnotationAssertion( "UBERON:0003645") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "metacarpal bone of digit 1") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (metacarpal bone of digit 2) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A metacarpal bone that distally_connected_to a proximal phalanx of manual digit 2.") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0000853") Annotation( "AAO"^^xsd:string) Annotation( "AAO:LAP"^^xsd:string) "Dumb-bell-shaped bone of endochondral origin with cartilaginous epiphyses that articulates with the prepollex and carpal 2(1) or carpal 2+3(1+2) proximally and with the proximal phalanx of digit II(I) distally.[AAO]") AnnotationAssertion( "2"^^xsd:nonNegativeInteger) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0000853") AnnotationAssertion( "EMAPA:19114") AnnotationAssertion( "FMA:23900") AnnotationAssertion( "MA:0001365") AnnotationAssertion( "NCIT:C52795") AnnotationAssertion(Annotation( "ncithesaurus:Metacarpal_Bone_Digit_2") "UMLS:C1708988") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "2 nd digit of hand metacarpal") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "2 nd digit of hand metacarpal bone") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "2 nd finger metacarpal") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "2 nd finger metacarpal bone") AnnotationAssertion( "finger 2 metacarpus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "hand digit 2 metacarpal") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "hand digit 2 metacarpal bone") AnnotationAssertion( "manual digit 2 metacarpus") AnnotationAssertion( "metacarpal 2") AnnotationAssertion(Annotation( "FMA:23900") "metacarpal II") AnnotationAssertion(Annotation( "MA:0001365") "metacarpal bone digit 2") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "metacarpal bone of 2 nd digit of hand") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "metacarpal bone of 2 nd finger") AnnotationAssertion(Annotation( ) Annotation( ) "metacarpal bone of digit II") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "metacarpal bone of hand digit 2") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "metacarpal bone of second finger") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "metacarpal of 2 nd digit of hand") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "metacarpal of 2 nd finger") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "metacarpal of hand digit 2") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "metacarpal of second finger") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "second finger metacarpal") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "second finger metacarpal bone") AnnotationAssertion(Annotation( "FMA:23900") "second metacarpal bone") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "EMAPA:19114") "forelimb digit 2 metacarpus") AnnotationAssertion( "UBERON:0003646") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "metacarpal bone of digit 2") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (metacarpal bone of digit 3) AnnotationAssertion(Annotation( ) Annotation( "OBOL:automatic"^^xsd:string) "A metacarpal bone that distally_connected_to a proximal phalanx of manual digit 3[Automatically generated definition].") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0000854") Annotation( "AAO"^^xsd:string) Annotation( "AAO:LAP"^^xsd:string) "Dumb-bell-shaped bone of endochondral origin with cartilaginous epiphyses that articulates with carpal 3(2) proximally and with the proximal phalanx of digit III(II) distally.[AAO]") AnnotationAssertion(Annotation( ) "The third metacarpal bone (metacarpal bone of the middle finger) is a little smaller than the second. The dorsal aspect of its base presents on its radial side a pyramidal eminence, the styloid process, which extends upward behind the capitate; immediately distal to this is a rough surface for the attachment of the extensor carpi radialis brevis muscle. The carpal articular facet is concave behind, flat in front, and articulates with the capitate. On the radial side is a smooth, concave facet for articulation with the second metacarpal, and on the ulnar side two small oval facets for the fourth metacarpal[Wikipedia:Third_metacarpal_bone].") AnnotationAssertion( "3"^^xsd:nonNegativeInteger) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0000854") AnnotationAssertion( "EMAPA:19116") AnnotationAssertion( "FMA:23901") AnnotationAssertion( "MA:0001366") AnnotationAssertion( "NCIT:C52794") AnnotationAssertion(Annotation( "ncithesaurus:Metacarpal_Bone_Digit_3") "UMLS:C1708989") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "3 rd digit of hand metacarpal") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "3 rd digit of hand metacarpal bone") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "3 rd finger metacarpal") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "3 rd finger metacarpal bone") AnnotationAssertion( "finger 3 metacarpus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "hand digit 3 metacarpal") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "hand digit 3 metacarpal bone") AnnotationAssertion( "manual digit 3 metacarpus") AnnotationAssertion( "metacarpal 3") AnnotationAssertion(Annotation( "FMA:23901") "metacarpal III") AnnotationAssertion(Annotation( "MA:0001366") "metacarpal bone digit 3") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "metacarpal bone of 3 rd digit of hand") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "metacarpal bone of 3 rd finger") AnnotationAssertion(Annotation( ) Annotation( ) "metacarpal bone of digit III") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "metacarpal bone of hand digit 3") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "metacarpal bone of third finger") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "metacarpal of 3 rd digit of hand") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "metacarpal of 3 rd finger") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "metacarpal of hand digit 3") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "metacarpal of third finger") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "third finger metacarpal") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "third finger metacarpal bone") AnnotationAssertion(Annotation( "FMA:23901") "third metacarpal bone") AnnotationAssertion(Annotation( ) Annotation( ) "forelimb cannon bone") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "EMAPA:19116") "forelimb digit 3 metacarpus") AnnotationAssertion( "UBERON:0003647") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "metacarpal bone of digit 3") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (metacarpal bone of digit 4) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A metacarpal bone that distally_connected_to a proximal phalanx of manual digit 4.") AnnotationAssertion(Annotation( ) "The fourth metacarpal bone (metacarpal bone of the ring finger) is shorter and smaller than the third. The base is small and quadrilateral; its superior surface presents two facets, a large one medially for articulation with the hamate, and a small one laterally for the capitate. On the radial side are two oval facets, for articulation with the third metacarpal; and on the ulnar side a single concave facet, for the fifth metacarpal[Wikipedia:Fourth_metacarpal_bone].") AnnotationAssertion( "4"^^xsd:nonNegativeInteger) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010615") AnnotationAssertion( "EMAPA:19118") AnnotationAssertion( "FMA:23902") AnnotationAssertion( "MA:0001367") AnnotationAssertion( "NCIT:C52793") AnnotationAssertion(Annotation( "ncithesaurus:Metacarpal_Bone_Digit_4") "UMLS:C1708990") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "4 th digit of hand metacarpal") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "4 th digit of hand metacarpal bone") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "4 th finger metacarpal") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "4 th finger metacarpal bone") AnnotationAssertion( "finger 4 metacarpus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "fourth finger metacarpal") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "fourth finger metacarpal bone") AnnotationAssertion(Annotation( "FMA:23902") "fourth metacarpal bone") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "hand digit 4 metacarpal") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "hand digit 4 metacarpal bone") AnnotationAssertion( "manual digit 4 metacarpus") AnnotationAssertion( "metacarpal 4") AnnotationAssertion(Annotation( "FMA:23902") "metacarpal IV") AnnotationAssertion(Annotation( "MA:0001367") "metacarpal bone digit 4") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "metacarpal bone of 4 th digit of hand") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "metacarpal bone of 4 th finger") AnnotationAssertion(Annotation( ) Annotation( ) "metacarpal bone of digit IV") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "metacarpal bone of fourth finger") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "metacarpal bone of hand digit 4") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "metacarpal of 4 th digit of hand") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "metacarpal of 4 th finger") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "metacarpal of fourth finger") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "metacarpal of hand digit 4") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "EMAPA:19118") "forelimb digit 4 metacarpus") AnnotationAssertion( "UBERON:0003648") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "metacarpal bone of digit 4") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (metacarpal bone of digit 5) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A metacarpal bone that distally_connected_to a proximal phalanx of manual digit 5.") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0000855") Annotation( "AAO"^^xsd:string) Annotation( "AAO:LAP"^^xsd:string) "Dumb-bell shaped bones of endochondral origin with cartilaginous epiphyses that articulates with carpal 5(4) proximally and with the proximal phalanx of digit V(IV) distally.[AAO]") AnnotationAssertion(Annotation( ) "The fifth metacarpal bone (metacarpal bone of the little finger or pinky finger) is the most lateral metacarpal[Wikipedia:Fifth_metacarpal_bone].") AnnotationAssertion(Annotation( "FMA"^^xsd:string) "FMA also has FMA:36782 ! Bone of fifth metacarpal bone") AnnotationAssertion( "5"^^xsd:nonNegativeInteger) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0000855") AnnotationAssertion( "EMAPA:19120") AnnotationAssertion( "FMA:23903") AnnotationAssertion( "MA:0001368") AnnotationAssertion( "NCIT:C52792") AnnotationAssertion(Annotation( "ncithesaurus:Metacarpal_Bone_Digit_5") "UMLS:C1711224") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "5 th digit of hand metacarpal") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "5 th digit of hand metacarpal bone") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "5 th finger metacarpal") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "5 th finger metacarpal bone") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "fifth finger metacarpal") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "fifth finger metacarpal bone") AnnotationAssertion(Annotation( "FMA:23903") "fifth metacarpal bone") AnnotationAssertion( "finger 5 metacarpus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "hand digit 5 metacarpal") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "hand digit 5 metacarpal bone") AnnotationAssertion( "manual digit 5 metacarpus") AnnotationAssertion( "metacarpal 5") AnnotationAssertion( "metacarpal V") AnnotationAssertion(Annotation( "MA:0001368") "metacarpal bone digit 5") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "metacarpal bone of 5 th digit of hand") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "metacarpal bone of 5 th finger") AnnotationAssertion(Annotation( ) Annotation( ) "metacarpal bone of digit V") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "metacarpal bone of fifth finger") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "metacarpal bone of hand digit 5") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "metacarpal of 5 th digit of hand") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "metacarpal of 5 th finger") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "metacarpal of fifth finger") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "metacarpal of hand digit 5") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "EMAPA:19120") "forelimb digit 5 metacarpus") AnnotationAssertion( "UBERON:0003649") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "metacarpal bone of digit 5") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (metatarsal bone of digit 1) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A metatarsal bone that distally_connected_to a proximal phalanx of pedal digit 1.") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0000925") Annotation( "AAO"^^xsd:string) Annotation( "AAO:LAP"^^xsd:string) "Dumb-bell-shaped bone of endochondral origin with cartilaginous epiphyses that articulates with the prepollex and tarsal 1 proximally and with the proximal phalanx of digit I distally.[AAO]") AnnotationAssertion(Annotation( ) "The first metatarsal bone is the bone in the body of the foot just behind the big toe. It is remarkable for its great thickness, and is the shortest of the metatarsal bones. The body is strong, and of well-marked prismoid form. The base presents, as a rule, no articular facets on its sides, but occasionally on the lateral side there is an oval facet, by which it articulates with the second metatarsal. Its proximal articular surface is of large size and kidney-shaped; its circumference is grooved, for the tarsometatarsal ligaments, and medially gives insertion to part of the tendon of the Tibialis anterior; its plantar angle presents a rough oval prominence for the insertion of the tendon of the Peronæus longus. The head is large; on its plantar surface are two grooved facets, on which glide sesamoid bones; the facets are separated by a smooth elevation[Wikipedia:First_metatarsal_bone].") AnnotationAssertion( "1"^^xsd:nonNegativeInteger) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0000925") AnnotationAssertion( "EMAPA:19123") AnnotationAssertion( "FMA:24502") AnnotationAssertion( "MA:0001369") AnnotationAssertion( "NCIT:C52791") AnnotationAssertion(Annotation( "ncithesaurus:Metatarsal_Bone_Digit_1") "UMLS:C1708999") AnnotationAssertion(Annotation( "FMA:24502") "first metatarsal bone") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "foot digit 1 metatarsal bone") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "hallux metatarsal bone") AnnotationAssertion( "metatarsal 1") AnnotationAssertion(Annotation( "AAO:0000925") "metatarsal I") AnnotationAssertion(Annotation( "MA:0001369") "metatarsal bone digit 1") AnnotationAssertion(Annotation( ) Annotation( ) "metatarsal bone of digit I") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "metatarsal bone of foot digit 1") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "metatarsal bone of hallux") AnnotationAssertion( "toe 1 metatarsal") AnnotationAssertion( "toe 1 metatarsus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "EMAPA:19123") "hindlimb digit 1 metatarsus") AnnotationAssertion( "UBERON:0003650") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "metatarsal bone of digit 1") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (metatarsal bone of digit 2) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A metatarsal bone that distally_connected_to a proximal phalanx of pedal digit 2.") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0000926") Annotation( "AAO"^^xsd:string) Annotation( "AAO:LAP"^^xsd:string) "Dumb-bell-shaped bone of endochondral origin with cartilaginous epiphyses that articulates with tarsal 2 proximally and with the proximal phalanx of digit II distally.[AAO]") AnnotationAssertion( "2"^^xsd:nonNegativeInteger) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0000926") AnnotationAssertion( "EMAPA:19125") AnnotationAssertion( "FMA:24503") AnnotationAssertion( "MA:0001370") AnnotationAssertion( "NCIT:C52790") AnnotationAssertion(Annotation( "ncithesaurus:Metatarsal_Bone_Digit_2") "UMLS:C1709000") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "foot digit 2 metatarsal bone") AnnotationAssertion( "metatarsal 2") AnnotationAssertion(Annotation( "AAO:0000926") "metatarsal II") AnnotationAssertion(Annotation( "MA:0001370") "metatarsal bone digit 2") AnnotationAssertion(Annotation( ) Annotation( ) "metatarsal bone of digit II") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "metatarsal bone of foot digit 2") AnnotationAssertion(Annotation( "FMA:24503") "second metatarsal bone") AnnotationAssertion( "toe 2 metatarsal") AnnotationAssertion( "toe 2 metatarsus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "EMAPA:19125") "hindlimb digit 2 metatarsus") AnnotationAssertion( "UBERON:0003651") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "metatarsal bone of digit 2") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (metatarsal bone of digit 3) AnnotationAssertion(Annotation( ) Annotation( "OBOL:automatic"^^xsd:string) "A metatarsal bone that distally_connected_to a proximal phalanx of pedal digit 3[Automatically generated definition].") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0000927") Annotation( "AAO"^^xsd:string) Annotation( "AAO:LAP"^^xsd:string) "Dumb-bell-shaped bone of endochondral origin with cartilaginous epiphyses that articulates with tarsal 3 proximally and with the proximal phalanx of digit III distally.[AAO]") AnnotationAssertion(Annotation( ) "The third metatarsal bone articulates proximally, by means of a triangular smooth surface, with the third cuneiform; medially, by two facets, with the second metatarsal; and laterally, by a single facet, with the fourth metatarsal. This last facet is situated at the dorsal angle of the base[Wikipedia:Third_metatarsal_bone].") AnnotationAssertion( "3"^^xsd:nonNegativeInteger) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0000927") AnnotationAssertion( "EMAPA:19127") AnnotationAssertion( "FMA:24504") AnnotationAssertion( "MA:0001371") AnnotationAssertion( "NCIT:C52789") AnnotationAssertion(Annotation( "ncithesaurus:Metatarsal_Bone_Digit_3") "UMLS:C1709001") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "foot digit 3 metatarsal bone") AnnotationAssertion( "metatarsal 3") AnnotationAssertion(Annotation( "AAO:0000927") "metatarsal III") AnnotationAssertion(Annotation( "MA:0001371") "metatarsal bone digit 3") AnnotationAssertion(Annotation( ) Annotation( ) "metatarsal bone of digit III") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "metatarsal bone of foot digit 3") AnnotationAssertion(Annotation( "FMA:24504") "third metatarsal bone") AnnotationAssertion( "toe 3 metatarsal") AnnotationAssertion( "toe 3 metatarsus") AnnotationAssertion(Annotation( ) Annotation( ) "hindlimb cannon bone") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "EMAPA:19127") "hindlimb digit 3 metatarsal") AnnotationAssertion( "UBERON:0003652") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "metatarsal bone of digit 3") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (metatarsal bone of digit 4) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A metatarsal bone that distally_connected_to a proximal phalanx of pedal digit 4.") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0000928") Annotation( "AAO"^^xsd:string) Annotation( "AAO:LAP"^^xsd:string) "Dumb-bell-shaped bone of endochondral origin with cartilaginous epiphyses that articulates with tarsal 4 or the distal head of the tibiale-fibulare proximally and with the proximal phalanx of digit IV distally.[AAO]") AnnotationAssertion(Annotation( ) "The fourth metatarsal bone is smaller in size than the third; its base presents an oblique quadrilateral surface for articulation with the cuboid; a smooth facet on the medial side, divided by a ridge into an anterior portion for articulation with the third metatarsal, and a posterior portion for articulation with the third cuneiform; on the lateral side a single facet, for articulation with the fifth metatarsal[Wikipedia:Fourth_metatarsal_bone].") AnnotationAssertion( "4"^^xsd:nonNegativeInteger) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0000928") AnnotationAssertion( "EMAPA:19129") AnnotationAssertion( "FMA:24505") AnnotationAssertion( "MA:0001372") AnnotationAssertion( "NCIT:C52788") AnnotationAssertion(Annotation( "ncithesaurus:Metatarsal_Bone_Digit_4") "UMLS:C1709002") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "foot digit 4 metatarsal bone") AnnotationAssertion(Annotation( "FMA:24505") "fourth metatarsal bone") AnnotationAssertion( "metatarsal 4") AnnotationAssertion(Annotation( "AAO:0000928") "metatarsal IV") AnnotationAssertion(Annotation( "MA:0001372") "metatarsal bone digit 4") AnnotationAssertion(Annotation( ) Annotation( ) "metatarsal bone of digit IV") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "metatarsal bone of foot digit 4") AnnotationAssertion( "toe 4 metatarsal") AnnotationAssertion( "toe 4 metatarsus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "EMAPA:19129") "hindlimb digit 4 metatarsus") AnnotationAssertion( "UBERON:0003653") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "metatarsal bone of digit 4") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (metatarsal bone of digit 5) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A metatarsal bone that distally_connected_to a proximal phalanx of pedal digit 5.") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0000929") Annotation( "AAO"^^xsd:string) Annotation( "AAO:LAP"^^xsd:string) "Dumb-bell-shaped bone of endochondral origin with cartilaginous epiphyses that articulates with tarsal 5 or the distal head of the tibiale-fibulare proximally and with the proximal phalanx of digit V distally.[AAO]") AnnotationAssertion(Annotation( ) "The fifth metatarsal bone is recognized by a rough eminence, the tuberosity, on the lateral side of its base. The base articulates behind, by a triangular surface cut obliquely in a transverse direction, with the cuboid; and medially, with the fourth metatarsal. On the medial part of its dorsal surface is inserted the tendon of the Peronæus tertius and on the dorsal surface of the tuberosity that of the Peronæus brevis. A strong band of the plantar aponeurosis connects the projecting part of the tuberosity with the lateral process of the tuberosity of the calcaneus. The plantar surface of the base is grooved for the tendon of the Abductor digiti quinti, and gives origin to the Flexor digiti quinti brevis. The base of the metatarsal is often injured and a particularly notorious fracture is the Jones fracture. When the tuberosity is broken, it is called a pseudo-Jones fracture or a dancer's fracture. This is a common fracture of the fifth metatarsal. Stress fractures are common in the fifth metatarsal among athletes[Wikipedia:Fifth_metatarsal_bone].") AnnotationAssertion( "5"^^xsd:nonNegativeInteger) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0000929") AnnotationAssertion( "EMAPA:19131") AnnotationAssertion( "FMA:24506") AnnotationAssertion( "MA:0001373") AnnotationAssertion( "NCIT:C52787") AnnotationAssertion(Annotation( "ncithesaurus:Metatarsal_Bone_Digit_5") "UMLS:C1709003") AnnotationAssertion(Annotation( "FMA:24506") "fifth metatarsal bone") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "foot digit 5 metatarsal bone") AnnotationAssertion( "metatarsal 5") AnnotationAssertion(Annotation( "AAO:0000929") "metatarsal V") AnnotationAssertion(Annotation( "MA:0001373") "metatarsal bone digit 5") AnnotationAssertion(Annotation( ) Annotation( ) "metatarsal bone of digit V") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "metatarsal bone of foot digit 5") AnnotationAssertion( "toe 5 metatarsal") AnnotationAssertion( "toe 5 metatarsus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "EMAPA:19131") "hindlimb digit 5 metatarsus") AnnotationAssertion( "UBERON:0003654") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "metatarsal bone of digit 5") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (molar tooth) AnnotationAssertion(Annotation( ) Annotation( ) "Molars are the rearmost and most complicated kind of tooth in most mammals.") AnnotationAssertion( "Adult humans have twelve molars, in four groups of three at the back of the mouth. The third, rearmost molar in each group is called a wisdom tooth. It is the last tooth to appear, breaking through the surface of the gum at about the age of twenty, although this varies from individual to individual. Ethnicity can also have an impact on the age at which this occurs, with statistical variations between groups. The human mouth contains upper (maxillary) and lower (mandibular) molars. They are: maxillary first molar, maxillary second molar, maxillary third molar, mandibular first molar, mandibular second molar, and mandibular third molar.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0001759") AnnotationAssertion( "CALOHA:TS-0637") AnnotationAssertion( "EMAPA:32897") AnnotationAssertion( "FMA:55638") AnnotationAssertion( "MA:0000350") AnnotationAssertion( "MESH:A14.254.860.525") AnnotationAssertion( "NCIT:C33136") AnnotationAssertion(Annotation( "ncithesaurus:Molar_Tooth") "UMLS:C0026367") AnnotationAssertion(Annotation( ) "dens molaris") AnnotationAssertion(Annotation( "BTO:0001759") "molaris") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "MA:0000350") "molar") AnnotationAssertion( "UBERON:0003655") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "molar tooth") SubClassOf( ) DisjointClasses( ) DisjointClasses( ) # Class: (mesopodium bone) AnnotationAssertion(Annotation( ) "A bone that is part of a mesopodial skeleton.") AnnotationAssertion(Annotation( ) "The carpus (wrist) and tarsus (ankle) of land vertebrates primitively had three rows of carpal or tarsal bones. Often some of these have become lost or fused in evolution. Three proximals. In the hand humans has all three. In the foot the middle proximal appears in 5-15% of people as an os trigonum. Centrale or os centrale, on the medial side. In humans and our closest relatives the African apes (chimpanzees and gorillas) it fuses to the scaphoid where it forms the articulation with the trapezoid bone; occasionally it stays separate. In Man's foot it is the navicular. Some early land vertebrates had more than one (up to three) os centrale per hand or foot. Distals, one per finger / toe at the base of each metacarpal or metatarsal. In mammals the 4th and 5th fuse. In the horse the 1st is lost") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:36579") AnnotationAssertion( "MA:0000295") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "basipodium bone") AnnotationAssertion(Annotation( "MA:0000295") "carpal/tarsal bone") AnnotationAssertion( "mesopod bone") AnnotationAssertion( "mesopodial bone") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003656") AnnotationAssertion(rdfs:label "mesopodium bone") SubClassOf( ) SubClassOf(Annotation( "UBERON:cjm") ) SubClassOf(Annotation( "https://github.com/obophenotype/uberon/wiki/Skeleton-partonomy-Design-Pattern") ObjectSomeValuesFrom( )) # Class: (limb joint) AnnotationAssertion(Annotation( ) "Any joint that is part of a (free) limb.") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:36501") AnnotationAssertion( "FMA:321558") AnnotationAssertion( "MA:0000691") AnnotationAssertion( "galen:LimbJoint") AnnotationAssertion( "joint of limb") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "joint of limb skeletal system") AnnotationAssertion(Annotation( "GO:0036023") "skeletal limb joint") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003657") AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "Most limb joints are synovial, but a few such as the tibiofibular joints are syndesmoses") AnnotationAssertion(rdfs:label "limb joint") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (hip muscle) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "Any muscle organ that is part of a hip [Automatically generated definition].") AnnotationAssertion( "MA:0000657") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "hip muscle organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "hip region muscle organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "muscle organ of hip") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "muscle organ of hip region") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "muscle organ of regio coxae") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "regio coxae muscle organ") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003658") AnnotationAssertion(rdfs:label "hip muscle") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "prolog"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (pedal digit muscle) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "Any muscle organ that is part of a toe [Automatically generated definition].") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37333") AnnotationAssertion( "MA:0000648") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "digit of foot muscle organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "digit of terminal segment of free lower limb muscle organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "digitus pedis muscle organ") AnnotationAssertion(Annotation( "MA:0000648") "foot digit muscle") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "foot digit muscle organ") AnnotationAssertion(Annotation( "OBOL:accepted"^^xsd:string) "hind limb digit muscle") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "muscle organ of digit of foot") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "muscle organ of digit of terminal segment of free lower limb") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "muscle organ of digitus pedis") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "muscle organ of foot digit") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "muscle organ of terminal segment of free lower limb digit") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "muscle organ of toe") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "terminal segment of free lower limb digit muscle organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "toe muscle organ") AnnotationAssertion(Annotation( "NCBITaxon:9606"^^xsd:string) Annotation( "OBOL:accepted"^^xsd:string) Annotation( ) "foot digit muscle") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003659") AnnotationAssertion(rdfs:label "pedal digit muscle") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (eyelid muscle) AnnotationAssertion(Annotation( ) "A muscle that attaches to an eyelid.") AnnotationAssertion(Annotation( "ncithesaurus:Eyelid_Muscle") "The muscle in the orbit of the eye that lifts the upper eyelid[ncithesaurus:Eyelid_Muscle].") AnnotationAssertion( ) AnnotationAssertion( "MA:0000269") AnnotationAssertion( "NCIT:C52803") AnnotationAssertion(Annotation( "ncithesaurus:Eyelid_Muscle") "UMLS:C1707990") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "blepharon muscle organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "eyelid muscle organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "muscle organ of blepharon") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "muscle organ of eyelid") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003660") AnnotationAssertion(rdfs:label "eyelid muscle") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (limb muscle) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "Any muscle organ that is part of a limb [Automatically generated definition].") AnnotationAssertion( "EMAPA:32700") AnnotationAssertion( "MA:0000692") AnnotationAssertion(Annotation( "OBOL:accepted"^^xsd:string) "limb muscle organ") AnnotationAssertion(Annotation( "OBOL:exploratory") "limb skeletal muscle") AnnotationAssertion(Annotation( "OBOL:accepted"^^xsd:string) "muscle organ of limb") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003661") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "limb muscle") SubClassOf( ) SubClassOf(Annotation( "prolog"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (forelimb muscle) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "Any muscle organ that is part of a forelimb.") AnnotationAssertion(Annotation( "FMA"^^xsd:string) "FMA and MA class actually refer to muscles of entire pectoral complex") AnnotationAssertion( "UBERON:0005634") AnnotationAssertion( "AAO:0000204") AnnotationAssertion( "BTO:0000479") AnnotationAssertion( "EMAPA:36049") AnnotationAssertion( "FMA:37348") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "fore limb muscle organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "forelimb muscle organ") AnnotationAssertion(Annotation( "FMA:37348") "free upper limb muscle") AnnotationAssertion(Annotation( "FMA:37348") "muscle of free upper limb") AnnotationAssertion(Annotation( "FMA:9621") "muscle of upper limb") AnnotationAssertion(Annotation( ) "upper limb skeletal muscle") AnnotationAssertion(Annotation( "Geisha:syn") Annotation( "NCBITaxon:8782"^^xsd:string) Annotation( ) "wing muscle") AnnotationAssertion(Annotation( "NCBITaxon:8782"^^xsd:string) Annotation( "OBOL:automatic"^^xsd:string) Annotation( ) "wing muscle") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "EHDAA2:0000141") "arm muscle system") AnnotationAssertion(Annotation( ) "musculature of arm") AnnotationAssertion(Annotation( ) "musculature of the arm") AnnotationAssertion( "UBERON:0003662") AnnotationAssertion(rdfs:label "forelimb muscle") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "prolog"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (hindlimb muscle) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "Any muscle organ that is part of a hindlimb [Automatically generated definition].") AnnotationAssertion( "AAO:0000222") AnnotationAssertion( "EFO:0001928") AnnotationAssertion( "FMA:37368") AnnotationAssertion(Annotation( "FMA:37368") "free lower limb muscle") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "hind limb muscle organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "hindlimb muscle organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "inferior member muscle organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "lower extremity muscle organ") AnnotationAssertion(Annotation( ) "lower limb skeletal muscle") AnnotationAssertion(Annotation( "FMA:37368") "muscle of free lower limb") AnnotationAssertion(Annotation( ) "muscle of posterior limb") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "muscle organ of hind limb") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "muscle organ of hindlimb") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "muscle organ of inferior member") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "muscle organ of lower extremity") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003663") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "hindlimb muscle") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "prolog"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (manual digit muscle) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "Any muscle organ that is part of a finger [Automatically generated definition].") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37331") AnnotationAssertion( "MA:0000624") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "digit of hand muscle organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "digit of terminal segment of free upper limb muscle organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "digitus manus muscle organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "finger muscle organ") AnnotationAssertion(Annotation( "OBOL:accepted"^^xsd:string) "fore limb digit muscle") AnnotationAssertion(Annotation( "MA:0000624") "hand digit muscle") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "hand digit muscle organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "muscle organ of digit of hand") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "muscle organ of digit of terminal segment of free upper limb") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "muscle organ of digitus manus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "muscle organ of finger") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "muscle organ of hand digit") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "muscle organ of terminal segment of free upper limb digit") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "terminal segment of free upper limb digit muscle organ") AnnotationAssertion(Annotation( "NCBITaxon:9606"^^xsd:string) Annotation( "OBOL:accepted"^^xsd:string) Annotation( ) "hand digit muscle") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003664") AnnotationAssertion(rdfs:label "manual digit muscle") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (upper jaw molar) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A molar tooth that is part of a upper jaw [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0002125") AnnotationAssertion( "EHDAA:8053") AnnotationAssertion( "EMAPA:17942") AnnotationAssertion( "FMA:55720") AnnotationAssertion( "MA:0001603") AnnotationAssertion( "NCIT:C49795") AnnotationAssertion(Annotation( "ncithesaurus:Upper_Jaw_Molar") "UMLS:C1710580") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "molar tooth of upper jaw") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "upper jaw molar tooth") AnnotationAssertion(Annotation( ) "upper molar tooth") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:55720") "maxillary secondary molar tooth") AnnotationAssertion(Annotation( ) "upper molar") AnnotationAssertion(Annotation( "FMA:55720") "upper permanent molar tooth") AnnotationAssertion(Annotation( "FMA:55720") "upper secondary molar tooth") AnnotationAssertion( "UBERON:0003666") AnnotationAssertion(rdfs:label "upper jaw molar") SubClassOf( ) SubClassOf( ) # Class: (lower jaw molar) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A molar tooth that is part of a lower jaw [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0001025") AnnotationAssertion( "EHDAA:8017") AnnotationAssertion( "EMAPA:17921") AnnotationAssertion( "FMA:290267") AnnotationAssertion( "MA:0001602") AnnotationAssertion( "NCIT:C49584") AnnotationAssertion(Annotation( "ncithesaurus:Lower_Jaw_Molar") "UMLS:C1708756") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "lower jaw molar tooth") AnnotationAssertion(Annotation( ) "lower molar tooth") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "molar tooth of lower jaw") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "lower molar") AnnotationAssertion( "UBERON:0003667") AnnotationAssertion(rdfs:label "lower jaw molar") SubClassOf( ) SubClassOf( ) # Class: (synovial bursa) AnnotationAssertion(Annotation( ) "A small fluid-filled sac lined by synovial membrane with an inner capillary layer of slimy fluid. It provides a cushion between bones and tendons and/or muscles around a joint. This helps to reduce friction between the bones and allows free movement. Bursae are filled with synovial fluid and are found around most major joints of the body.") AnnotationAssertion(Annotation( "FMA:9692") "bursa") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:9692") AnnotationAssertion( "GAID:252") AnnotationAssertion( "MESH:D002061") AnnotationAssertion( "NCIT:C33717") AnnotationAssertion(Annotation( "ncithesaurus:Synovial_Bursa") "UMLS:C0006441") AnnotationAssertion( "galen:Bursa") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "bursa synovialis") AnnotationAssertion( "UBERON:0003668") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "synovial bursa") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/b/b3/Gray350.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (fascia lata) AnnotationAssertion(Annotation( ) "The deep fascia of the thigh. [WP,unvetted].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:13902") AnnotationAssertion( "GAID:117") AnnotationAssertion( "MESH:D005206") AnnotationAssertion( "NCIT:C32585") AnnotationAssertion(Annotation( "ncithesaurus:Fascia_Lata") "UMLS:C0015642") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003669") AnnotationAssertion(rdfs:label "fascia lata") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/e/e7/Gray431.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) # Class: (smegma) AnnotationAssertion(Annotation( ) "A combination of exfoliated (shed) epithelial cells, transudated skin oils, and moisture. It occurs in both female and male mammalian genitalia[WP].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:19656") AnnotationAssertion( "GAID:1170") AnnotationAssertion( "MESH:D012902") AnnotationAssertion( "NCIT:C33574") AnnotationAssertion(Annotation( "ncithesaurus:Smegma") "UMLS:C0037359") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003670") AnnotationAssertion(rdfs:label "smegma") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (anterior cruciate ligament of knee joint) AnnotationAssertion(Annotation( "ncithesaurus:Anterior_Cruciate_Ligament") "A major stabilizing ligament in the knee that attaches the surfaces of the femur and tibia.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:44614") AnnotationAssertion( "GAID:122") AnnotationAssertion( "MESH:D016118") AnnotationAssertion( "NCIT:C32088") AnnotationAssertion( "OpenCyc:Mx4r77KC8RuaEd2f4ADggVfexA") AnnotationAssertion(Annotation( "ncithesaurus:Anterior_Cruciate_Ligament") "UMLS:C0078960") AnnotationAssertion( "galen:AnteriorCruciateLigament") AnnotationAssertion(Annotation( "FMA:44614") "anterior cruciate ligament") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003671") AnnotationAssertion(rdfs:label "anterior cruciate ligament of knee joint") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses(Annotation( "lexical"^^xsd:string) ) # Class: (dentition) AnnotationAssertion(Annotation( ) "A collection of teeth arranged in some pattern in the mouth or other part of the body. The arrangement may be a simple row, a collection of rows, or a more elaborate structure, such as a toooth whorl.") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0000126") Annotation( "AAO"^^xsd:string) Annotation( "AAO:LAP"^^xsd:string) "Dentition refers to set of teeth, especially with regard to their number, kind, and arrangement, in the mouth.[AAO]") AnnotationAssertion(Annotation( "ncithesaurus:Dentition") "The teeth collectively in the dental arch. Dentition ordinarily refers to the natural teeth in position in their alveoli. (MeSH[ncithesaurus:Dentition])") AnnotationAssertion(Annotation( "FMA"^^xsd:string) "In FMA this is an anatomical set") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0000126") AnnotationAssertion( "FMA:75150") AnnotationAssertion( "GAID:1249") AnnotationAssertion( "MESH:A14.254") AnnotationAssertion( "NCIT:C13072") AnnotationAssertion( "OpenCyc:Mx4rvVi65JwpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Dentition") "UMLS:C0011443") AnnotationAssertion(Annotation( "FMA:75150") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "dentes") AnnotationAssertion(Annotation( "FMA:75150") "set of teeth") AnnotationAssertion(Annotation( "FMA:75150") "teeth") AnnotationAssertion(Annotation( "FMA:75150") "teeth set") AnnotationAssertion( "uberon") AnnotationAssertion( "collection of teeth") AnnotationAssertion( "teeth") AnnotationAssertion( "UBERON:0003672") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "dentition") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (ligamentum flavum) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:13423") AnnotationAssertion( "GAID:126") AnnotationAssertion( "MESH:D017843") AnnotationAssertion( "NCIT:C32986") AnnotationAssertion(Annotation( "ncithesaurus:Ligamentum_Flavum") "UMLS:C0206327") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "GAID:126") "flaval ligament") AnnotationAssertion( "UBERON:0003673") AnnotationAssertion(rdfs:label "ligamentum flavum") SubClassOf( ) # Class: (cuspid) AnnotationAssertion(Annotation( ) "A tooth that is typically long and pointed and bearing a single cusp.") AnnotationAssertion(Annotation( "Although there are a few exceptions, the dental formula for the great majority of cricetids is 1.0.0.3") Annotation( ) ) AnnotationAssertion( "Most species that develop them normally have four per individual, two in the upper jaw and two in the lower, separated within each jaw by its incisors; humans and dogs are examples. In most animals, canines are the anterior-most teeth in the maxillary bone. The four canines in humans are the two maxillary canines and the two mandibular canines.") AnnotationAssertion( "canine") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:55636") AnnotationAssertion( "GAID:1262") AnnotationAssertion( "MESH:A14.254.860.200") AnnotationAssertion( "NCIT:C32258") AnnotationAssertion(Annotation( "ncithesaurus:Canine_Tooth") "UMLS:C0010482") AnnotationAssertion(Annotation( "FMA:55636") "canine tooth") AnnotationAssertion(Annotation( "FMA:55636") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "cuspis dentis") AnnotationAssertion( "caniniform tooth") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "canine (tooth)") AnnotationAssertion(Annotation( ) "canine eminence") AnnotationAssertion(Annotation( ) Annotation( ) "canine teeth") AnnotationAssertion(Annotation( "GAID:1262") Annotation( ) "canine teeth") AnnotationAssertion(Annotation( ) "dens caninus") AnnotationAssertion(Annotation( ) Annotation( ) "dentes canini") AnnotationAssertion(Annotation( ) "dogtooth (anatomy)") AnnotationAssertion(Annotation( ) Annotation( ) "eye teeth") AnnotationAssertion(Annotation( ) "eye tooth") AnnotationAssertion(Annotation( ) Annotation( ) "eyeteeth") AnnotationAssertion(Annotation( ) "eyetooth") AnnotationAssertion(Annotation( ) "fang") AnnotationAssertion( "UBERON:0003674") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "cuspid") AnnotationAssertion( "Azawakh:K9.jpg"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "1") Annotation( "cardinality not allowed with transitivity in OWL") ObjectSomeValuesFrom( )) DisjointClasses( ) # Class: (tooth crown) AnnotationAssertion(Annotation( "ncithesaurus:Corona_Dentis") "The portion of the tooth covered by enamel.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:55623") AnnotationAssertion( "GAID:1275") AnnotationAssertion( "MESH:A14.254.900.710") AnnotationAssertion( "NCIT:C32375") AnnotationAssertion(Annotation( "ncithesaurus:Corona_Dentis") "UMLS:C0226993") AnnotationAssertion(Annotation( "FMA:55623") "anatomical crown") AnnotationAssertion(Annotation( "ncithesaurus:Corona_Dentis") Annotation( ) "corona dentis") AnnotationAssertion(Annotation( "FMA:55623") "crown of tooth") AnnotationAssertion(Annotation( "FMA:55623") "tooth crown") AnnotationAssertion( "uberon") AnnotationAssertion( "crown") AnnotationAssertion( "UBERON:0003675") AnnotationAssertion(rdfs:label "tooth crown") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (patellar ligament) AnnotationAssertion(Annotation( ) Annotation( "MESH:A02.513.514.475") "The central portion of the common tendon of the quadriceps femoris. It is attached to the apex of the PATELLA and to the lower part of the tubercle of the TIBIA.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:18509") AnnotationAssertion( "FMA:44581") AnnotationAssertion( "GAID:128") AnnotationAssertion( "MESH:D017847") AnnotationAssertion( "NCIT:C33283") AnnotationAssertion(Annotation( "ncithesaurus:Patellar_Ligament") "UMLS:C0206332") AnnotationAssertion( "galen:LigamentumPatellae") AnnotationAssertion(Annotation( "FMA:44581") "central band of tendon of quadriceps femoris") AnnotationAssertion(Annotation( "FMA:44581") "ligamentum patella") AnnotationAssertion( "uberon") AnnotationAssertion( "patellar tendon") AnnotationAssertion( "UBERON:0003676") AnnotationAssertion(rdfs:label "patellar ligament") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (tooth root) AnnotationAssertion(Annotation( "MP:0011165") "The part of a tooth that is implanted in the gum; the root is normally located below the neck of the tooth, covered by cementum rather than enamel, and attached by the periodontal ligament to the alveolar bone.") AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37975") AnnotationAssertion( "FMA:55624") AnnotationAssertion( "GAID:1280") AnnotationAssertion( "MESH:A14.254.900.750") AnnotationAssertion(Annotation( "FMA:55624") "radix corona") AnnotationAssertion(Annotation( "FMA:55624") "root of tooth") AnnotationAssertion(Annotation( "FMA:55624") "tooth root") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003677") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "tooth root") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (tooth apex) AnnotationAssertion( "FMA:63000") AnnotationAssertion( "GAID:1281") AnnotationAssertion( "MESH:A14.254.900.750.700") AnnotationAssertion(Annotation( "FMA:63000") "apex of tooth") AnnotationAssertion(Annotation( "FMA:63000") "tooth apex") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "GAID:1281") "apical foramen") AnnotationAssertion(Annotation( "GAID:1281") "tooth apice") AnnotationAssertion( "UBERON:0003678") AnnotationAssertion(rdfs:label "tooth apex") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (mouth floor) AnnotationAssertion(Annotation( ) Annotation( "ncithesaurus:Floor_of_the_Mouth") "The ventral area of the mouth. In organisms with a tongue, this is the area under the ventral surface of the tongue[ncit, modified].") AnnotationAssertion( "reclassify after CARO2 overhaul") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "CALOHA:TS-2207") AnnotationAssertion( "EFO:0001923") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37911") AnnotationAssertion( "FMA:86592") AnnotationAssertion( "GAID:1283") AnnotationAssertion( "MESH:D009060") AnnotationAssertion( "NCIT:C54187") AnnotationAssertion(Annotation( "ncithesaurus:Floor_of_the_Mouth") "UMLS:C0026638") AnnotationAssertion(Annotation( "FMA:86592") "floor of mouth") AnnotationAssertion( "floor of oval cavity") AnnotationAssertion( "floor of the oval cavity") AnnotationAssertion(Annotation( "GAID:1283") "sublingual region") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003679") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "mouth floor") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (posterior cruciate ligament of knee joint) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:44617") AnnotationAssertion( "GAID:129") AnnotationAssertion( "MESH:D016119") AnnotationAssertion( "NCIT:C33359") AnnotationAssertion(Annotation( "ncithesaurus:Posterior_Cruciate_Ligament") "UMLS:C0080039") AnnotationAssertion( "galen:PosteriorCruciateLigament") AnnotationAssertion(Annotation( "FMA:44617") "posterior cruciate ligament") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003680") AnnotationAssertion(rdfs:label "posterior cruciate ligament of knee joint") SubClassOf( ) # Class: (masticatory muscle) AnnotationAssertion(Annotation( ) Annotation( "MESH:A02.633.567.600") "In humans: Muscles arising in the zygomatic arch that close the jaw. Their nerve supply is masseteric from the mandibular division of the trigeminal nerve. (From Stedman, 25th ed).") AnnotationAssertion( "we use this specifically for a jaw muscle that is innervates by the mandibular nerve.") AnnotationAssertion(Annotation( ) "originate from the somitomeres. These muscles develop late and are not complete even at birth. Tongue muscles develop before masticatory muscles and complete by birth") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:74060") AnnotationAssertion( "GAID:145") AnnotationAssertion( "MA:0003115") AnnotationAssertion( "MESH:D008410") AnnotationAssertion( "NCIT:C33147") AnnotationAssertion(Annotation( "ncithesaurus:Muscle_of_the_Mastication") "UMLS:C0024890") AnnotationAssertion( "muscle of mastication") AnnotationAssertion( "uberon") AnnotationAssertion( "jaw muscle") AnnotationAssertion(Annotation( ) "musculi masticatorii") AnnotationAssertion(Annotation( ) Annotation( ) "musculi masticatorii") AnnotationAssertion( "UBERON:0003681") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "masticatory muscle") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/4/4d/Gray781.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (palatal muscle) AnnotationAssertion(Annotation( ) Annotation( "MESH:A02.633.567.750") "The muscles of the palate are the glossopalatine, palatoglossus, levator palati(ni), musculus uvulae, palatopharyngeus, and tensor palati(ni).") AnnotationAssertion( "consider extra class for fauces") AnnotationAssertion(Annotation( "FMA"^^xsd:string) "see also FMA:71438 ! set of muscles of soft palate and fauces") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37929") AnnotationAssertion( "FMA:46726") AnnotationAssertion( "GAID:151") AnnotationAssertion( "MESH:D010156") AnnotationAssertion( "NCIT:C33247") AnnotationAssertion(Annotation( "ncithesaurus:Palatal_Muscle") "UMLS:C0030213") AnnotationAssertion(Annotation( "FMA:46726") "muscle of palate") AnnotationAssertion( "musculi palati mollis et faucium") AnnotationAssertion(Annotation( "FMA:46726") "palatal muscle") AnnotationAssertion(Annotation( "FMA:46726") "palate muscle") AnnotationAssertion(Annotation( "FMA:46726") "palatine muscle") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "musculi palati mollis et faucium") AnnotationAssertion( "UBERON:0003682") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "palatal muscle") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/c/c7/Gray1028.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (rotator cuff) AnnotationAssertion(Annotation( ) "A group of muscles and their tendons that act to stabilize the shoulder. The four muscles of the rotator cuff are over half of the seven scapulohumeral muscles.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:37018") AnnotationAssertion( "GAID:160") AnnotationAssertion( "MESH:D017006") AnnotationAssertion( "NCIT:C33497") AnnotationAssertion(Annotation( "ncithesaurus:Rotator_Cuff") "UMLS:C0085515") AnnotationAssertion(Annotation( "FMA:37018") "musculotendinous cuff") AnnotationAssertion(Annotation( "FMA:37018") "rotator cuff") AnnotationAssertion(Annotation( "FMA:37018") "tendinous cuff") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003683") AnnotationAssertion(rdfs:label "rotator cuff") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (abdominal cavity) AnnotationAssertion(Annotation( "UBERON:cjm"^^xsd:string) "The part of the ventral body cavity that is within the abdomen proper (excluding the pelvic cavity).") AnnotationAssertion(Annotation( "FMA"^^xsd:string) "in FMA this contains the pelvic cavity, but this is inconsistent with the concept of abdominopelvic cavity") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EFO:0000213") AnnotationAssertion( "EMAPA:36505") AnnotationAssertion( "FMA:12266") AnnotationAssertion( "GAID:17") AnnotationAssertion( "MA:0003057") AnnotationAssertion( "MESH:A01.047.025") AnnotationAssertion( "NCIT:C12664") AnnotationAssertion( "OpenCyc:Mx4rvZR1TJwpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Abdominal_Cavity") "UMLS:C0230168") AnnotationAssertion( "galen:AbdominalCavity") AnnotationAssertion(Annotation( "FMA:12266") "cavity of abdominal compartment") AnnotationAssertion(Annotation( "FMA:12266") "cavity of compartment of abdomen") AnnotationAssertion(Annotation( "FMA:12266") "space of abdominal compartment") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "cavitas abdominis") AnnotationAssertion(Annotation( "GAID:17") "cavitas abdominis") AnnotationAssertion( "UBERON:0003684") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "abdominal cavity") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/e/ee/Scheme_body_cavities-en.svg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (cranial suture) AnnotationAssertion(Annotation( ) Annotation( "FMA:71385") Annotation( "ISBN:3110148986") "Fibrous joint in which the articulating bones or cartilages of the skull are connected by sutural ligaments (scant amount of collagenous dense connective tissue). Examples: sagittal suture, frontal suture.") AnnotationAssertion( ) AnnotationAssertion( "sutura") AnnotationAssertion(Annotation( "FMA:71385") "suture") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:35263") AnnotationAssertion( "FMA:7493") AnnotationAssertion( "GAID:211") AnnotationAssertion( "MA:0001475") AnnotationAssertion( "MESH:D003393") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "cranium suture") AnnotationAssertion( "suture joint of skull") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "suture of cranium") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003685") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "cranial suture") SubClassOf(Annotation( "GO"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (tooth socket) AnnotationAssertion(Annotation( ) "Dental alveolus (plural, alveoli) are sockets in the jaws in which the roots of teeth are held in the alveolar process of maxilla with the periodontal ligament. The lay term for dental alveoli is tooth sockets. A joint that connect the roots of the teeth and the alveolus are called gomphosis (plural gomphoses). In mammals, tooth sockets are found in the maxilla and the mandible. [WP,unvetted].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:57490") AnnotationAssertion( "GAID:217") AnnotationAssertion( "MESH:D020390") AnnotationAssertion( "NCIT:C94543") AnnotationAssertion(Annotation( "ncithesaurus:Tooth_Socket") "UMLS:C0227130") AnnotationAssertion(Annotation( "FMA:57490") "dental alveolus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "GAID:217") "alveolus dentali") AnnotationAssertion(Annotation( ) Annotation( ) "alveolus dentalis") AnnotationAssertion(Annotation( "GAID:217") "alveolus dentalis") AnnotationAssertion(Annotation( "GAID:217") "dental alveolus") AnnotationAssertion( "UBERON:0003686") AnnotationAssertion(rdfs:label "tooth socket") AnnotationAssertion( "Alveole:zahn.jpg"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "MESH-modified") ObjectSomeValuesFrom( )) # Class: (foramen magnum) AnnotationAssertion(Annotation( ) "In anatomy, in the occipital bone, the foramen magnum is one of the several oval or circular apertures in the base of the skull, through which the medulla oblongata (an extension of the spinal cord) enters and exits the skull vault. Apart from the transmission of the medulla oblongata and its membranes, the foramen magnum transmits the Spinal Accessory nerve, vertebral arteries, the anterior and posterior spinal arteries, the membrana tectoria and alar ligaments. [WP,unvetted].") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0002045") Annotation( "TAO"^^xsd:string) Annotation( "TAO:wd"^^xsd:string) "Foramen in the occipital region of neurocranium to allow passage of spinal cord.[TAO]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010826") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37868") AnnotationAssertion( "FMA:75306") AnnotationAssertion( "GAID:228") AnnotationAssertion( "MESH:D005539") AnnotationAssertion( "NCIT:C12495") AnnotationAssertion( "OpenCyc:Mx4rwOm-FpwpEbGdrcN5Y29ycA") AnnotationAssertion( "TAO:0002045") AnnotationAssertion(Annotation( "ncithesaurus:Foramen_Magnum") "UMLS:C0016519") AnnotationAssertion( "ZFA:0005387") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003687") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "Design pattern notes: check whether this fits the foramen design pattern") AnnotationAssertion(rdfs:label "foramen magnum") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/3/39/Gray130.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (omentum) AnnotationAssertion(Annotation( "ncithesaurus:Omentum") "A fold of peritoneum originating at the stomach and supporting the viscera.") AnnotationAssertion( "omental") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "CALOHA:TS-2004") AnnotationAssertion( "EV:0100084") AnnotationAssertion( "FMA:14650") AnnotationAssertion( "GAID:23") AnnotationAssertion( "MESH:A01.047.025.600.573") AnnotationAssertion( "NCIT:C33209") AnnotationAssertion(Annotation( "ncithesaurus:Omentum") "UMLS:C0028977") AnnotationAssertion( "galen:Omentum") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003688") AnnotationAssertion(rdfs:label "omentum") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (sella turcica) AnnotationAssertion(Annotation( ) "The sella turcica is a saddle-shaped depression in the sphenoid bone at the base of the human skull. [WP,unvetted].") AnnotationAssertion( "for consistency with FMA we have a separate class for the cavity of the sella turcica") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "CALOHA:TS-2342") AnnotationAssertion( "FMA:54709") AnnotationAssertion( "GAID:231") AnnotationAssertion( "MESH:D012658") AnnotationAssertion( "NCIT:C12497") AnnotationAssertion(Annotation( "ncithesaurus:Sella_Turcica") "UMLS:C0036609") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "Turkey Chair") AnnotationAssertion(Annotation( ) "suprasellar") AnnotationAssertion(Annotation( ) "turkish saddle") AnnotationAssertion( "UBERON:0003689") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "sella turcica") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/3/35/Gray145.png"^^xsd:anyURI) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (fused sacrum) AnnotationAssertion(Annotation( ) "A collection of sacral vertebrae in the sacral region that are fused and part of the bony pelvis.") AnnotationAssertion( "sacral") AnnotationAssertion(Annotation( "AAO"^^xsd:string) "the AAO class 'sacrum' is deliberately placed under 'sacral vertebra' rather than here") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "CALOHA:TS-2201") AnnotationAssertion( "EFO:0003071") AnnotationAssertion( "FMA:16202") AnnotationAssertion( "GAID:241") AnnotationAssertion( "MESH:D012447") AnnotationAssertion( "NCIT:C33508") AnnotationAssertion( "OpenCyc:Mx4rvmBKnJwpEbGdrcN5Y29ycA") AnnotationAssertion( "galen:Sacrum") AnnotationAssertion(Annotation( "FMA:16202") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "os sacrum [vertebrae sacrales I - V]") AnnotationAssertion(Annotation( "FMA:16202") Annotation( ) "sacrum") AnnotationAssertion(Annotation( "FMA:16202") "sacrum [sacral vertebrae I - V]") AnnotationAssertion(Annotation( "FMA:16202") "sacrum [sacral vertebrae I-V]") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "os sacrum") AnnotationAssertion(Annotation( "FMA:16202") "sacral bone") AnnotationAssertion( "UBERON:0003690") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "fused sacrum") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/e/ec/Gray95.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (epidural space) AnnotationAssertion(Annotation( ) "The outermost part of the spinal canal. It is the space within the canal (formed by the surrounding vertebrae) lying outside the dura mater.") AnnotationAssertion( "epidural") AnnotationAssertion( "extradural") AnnotationAssertion( "In humans the epidural space contains lymphatics, spinal nerve roots, loose fatty tissue, small arteries, and a network of large, thin-walled blood vessels called the epidural venous plexus") AnnotationAssertion(Annotation( "FMA"^^xsd:string) "in the FMA this is treated as a space of the head, but this ontology covers non-humans, where the space may continue into the tail") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:71228") AnnotationAssertion( "GAID:243") AnnotationAssertion( "MESH:D004824") AnnotationAssertion(Annotation( ) Annotation( ) "cavum epidurale") AnnotationAssertion(Annotation( ) Annotation( ) "cavum extradurale") AnnotationAssertion(Annotation( "FMA:71228") "extradural space") AnnotationAssertion(Annotation( ) Annotation( ) "spatium epidurale") AnnotationAssertion(Annotation( "FMA:71228") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "spatium extradurale") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "epidural cavity") AnnotationAssertion( "UBERON:0003691") AnnotationAssertion(rdfs:label "epidural space") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (acromioclavicular joint) AnnotationAssertion(Annotation( ) Annotation( ) "Any joint connecting the acromonion of the scapula and clavicle.") AnnotationAssertion(Annotation( "MESH:A02.835.583.032") "The gliding joint formed by the outer extremity of the clavicle and the inner margin of the acromion process of the scapula.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:25898") AnnotationAssertion( "GAID:249") AnnotationAssertion( "MESH:D000173") AnnotationAssertion( "NCIT:C32047") AnnotationAssertion( "OpenCyc:Mx4rwHhmSJwpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Acromioclavicular_Joint") "UMLS:C0001208") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "acromioclavicular articulation") AnnotationAssertion(Annotation( ) Annotation( ) "articulatio acromioclavicularis") AnnotationAssertion(Annotation( ) "scapuloclavicular articulation") AnnotationAssertion( "UBERON:0003692") AnnotationAssertion(rdfs:label "acromioclavicular joint") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/3/3b/Gray326.png"^^xsd:anyURI) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (retroperitoneal space) AnnotationAssertion(Annotation( ) "Anatomical space in the abdominal cavity behind (retro) the peritoneum. It has no specific delineating anatomical structures. Organs are retroperitoneal if they only have peritoneum on their anterior side.") AnnotationAssertion( "retroperitoneal") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "CALOHA:TS-2337") AnnotationAssertion( "EFO:0002806") AnnotationAssertion( "FMA:15080") AnnotationAssertion( "GAID:25") AnnotationAssertion( "MESH:A01.047.025.750") AnnotationAssertion( "NCIT:C12298") AnnotationAssertion(Annotation( "ncithesaurus:Retroperitoneum") "UMLS:C0035359") AnnotationAssertion(Annotation( "FMA:15080") "retroperitoneum") AnnotationAssertion(Annotation( ) Annotation( ) "spatium retroperitoneale") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003693") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "retroperitoneal space") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/f/f2/Gray1126.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (atlanto-axial joint) AnnotationAssertion(Annotation( ) "The Atlanto-axial joint is of a complicated nature, comprising no fewer than four distinct joints. There is a pivot articulation between the odontoid process of the axis and the ring formed by the anterior arch and the transverse ligament of the atlas.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:25524") AnnotationAssertion( "GAID:250") AnnotationAssertion( "MESH:D001268") AnnotationAssertion( "NCIT:C32157") AnnotationAssertion( "OpenCyc:Mx4rwUUIHpwpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Atlanto-axial_Joint") "UMLS:C0004168") AnnotationAssertion(Annotation( "GAID:250") "atlanto axial joint") AnnotationAssertion(Annotation( "GAID:250") "atlantoaxial joint") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "articulatio atlantoaxialis") AnnotationAssertion(Annotation( ) "articulatio atlantoepistrophica") AnnotationAssertion(Annotation( ) "atlantoaxial") AnnotationAssertion(Annotation( ) "lateral atlanto-axial joint") AnnotationAssertion(Annotation( ) "median atlanto-axial joint") AnnotationAssertion( "UBERON:0003694") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "atlanto-axial joint") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/d/d4/Gray304.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (metacarpophalangeal joint) AnnotationAssertion(Annotation( ) "The metacarpophalangeal joints (MCP) are of the condyloid kind, formed by the reception of the rounded heads of the metacarpal bones into shallow cavities on the proximal ends of the first phalanges, with the exception of that of the thumb, which presents more of the characters of a ginglymoid joint. Arthritis of the MCP is a distinguishing feature of Rheumatoid Arthritis, as opposed to the distal interphalangeal joint in osteoarthritis. [WP,unvetted].") AnnotationAssertion( "we follow FMA in making these joints part of digits. We include carpometacarpophalangeal joint as a synonym - these joints connect to the carpometacarpus - this is not necessarily inconsistent with the relationship for this class to metacarpal bone, as the carpometacarpus could be considered to have a metacarpal as part") AnnotationAssertion( ) AnnotationAssertion(Annotation( "FMA:35246") "metacarpal joint") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:19302") AnnotationAssertion( "FMA:35246") AnnotationAssertion( "GAID:255") AnnotationAssertion( "MA:0000453") AnnotationAssertion( "MESH:A02.835.583.345.512") AnnotationAssertion( "NCIT:C33106") AnnotationAssertion( "OpenCyc:Mx4rwNt8wJwpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Metacarpophalangeal_Joint") "UMLS:C0025525") AnnotationAssertion( "galen:MetacarpoPhalangealJoint") AnnotationAssertion(Annotation( "FMA:35246") "MP joint") AnnotationAssertion(Annotation( ) "knuckle") AnnotationAssertion(Annotation( ) Annotation( ) "knuckles") AnnotationAssertion(Annotation( "MA:0000453") "metacarpo-phalangeal joint") AnnotationAssertion(Annotation( "NCBITaxon:8782"^^xsd:string) Annotation( ) "carpometacarpophalangeal joint") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "articulationes metacarpophalangeae") AnnotationAssertion(Annotation( "HP:0004294") "metacarpal phalangeal joint") AnnotationAssertion( "UBERON:0003695") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "metacarpophalangeal joint") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/5/53/Gray337.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (metatarsophalangeal joint) AnnotationAssertion(Annotation( ) "The metatarsophalangeal articulations are the joints between the metatarsal bones of the foot and the proximal bones of the toes . They are condyloid joints meaning an elliptical or rounded surface (of the metatarsal bones) come close to the shallow cavities (of the proximal phalanges). The ligaments are the plantar and two collateral.") AnnotationAssertion( "we follow FMA in making these joints part of digits") AnnotationAssertion( "http://purl.bioontology.org/ontology/provisional/1ddd2e2d-2ace-4c87-8ec6-d3b5730b3e7c") AnnotationAssertion( "http://purl.bioontology.org/ontology/provisional/8378426c-67ca-4bab-a9cf-531093b9b95e") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:35222") AnnotationAssertion( "GAID:258") AnnotationAssertion( "MESH:D008683") AnnotationAssertion( "NCIT:C33108") AnnotationAssertion( "OpenCyc:Mx4rwCtS0pwpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Metatarsophalangeal_Joint") "UMLS:C0025589") AnnotationAssertion( "galen:MetatarsoPhalangealJoint") AnnotationAssertion(Annotation( "PHENOSCAPE:ad"^^xsd:string) "metatarsal-phalangeal joint") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "articulationes metatarsophalangeae") AnnotationAssertion(Annotation( "FMA:35222") "metatarsal joint") AnnotationAssertion(Annotation( ) "metatarsalphalangeal joint") AnnotationAssertion(Annotation( ) "metatarsophalangeal") AnnotationAssertion(Annotation( ) "metatarsophalangeal articulation") AnnotationAssertion( "UBERON:0003696") AnnotationAssertion(rdfs:label "metatarsophalangeal joint") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/9/9e/Gray268.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (abdominal wall) AnnotationAssertion(Annotation( "ncithesaurus:Abdominal_Wall") "The tissues that surround the organs that are present within the abdominal cavity. The abdominal wall tissue is composed of layers of fat, parietal peritoneum, fascia, and muscles.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37064") AnnotationAssertion( "FMA:10429") AnnotationAssertion( "FMA:259054") AnnotationAssertion( "GAID:26") AnnotationAssertion( "MESH:A01.047.050") AnnotationAssertion( "NCIT:C77608") AnnotationAssertion(Annotation( "ncithesaurus:Abdominal_Wall") "UMLS:C0836916") AnnotationAssertion(Annotation( ) "paries abdominalis") AnnotationAssertion(Annotation( "FMA:259054") "wall of abdomen") AnnotationAssertion(Annotation( "FMA:10429") "wall of abdomen proper") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:10429") "abdominal wall proper") AnnotationAssertion(Annotation( ) "layers of the abdominal wall") AnnotationAssertion(Annotation( ) Annotation( ) "paries abdominalis") AnnotationAssertion( "UBERON:0003697") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "abdominal wall") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/e/ee/Scheme_body_cavities-en.svg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (subtalar joint) AnnotationAssertion(Annotation( ) Annotation( ) "A joint of the pes that connects the talus and the calcaneus.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:35198") AnnotationAssertion( "GAID:260") AnnotationAssertion( "MESH:D013380") AnnotationAssertion( "NCIT:C33653") AnnotationAssertion(Annotation( "ncithesaurus:Subtalar_Joint") "UMLS:C0038593") AnnotationAssertion(Annotation( "FMA:35198") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "articulatio subtalaris") AnnotationAssertion(Annotation( "FMA:35198") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "articulatio talocalcanea") AnnotationAssertion(Annotation( "FMA:35198") "subtalar joint") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "talocalcaneal articulation") AnnotationAssertion(Annotation( "GAID:260") "talocalcaneal joint") AnnotationAssertion( "UBERON:0003698") AnnotationAssertion(rdfs:label "subtalar joint") AnnotationAssertion( "Subtalar:Joint.PNG"^^xsd:anyURI) SubClassOf(Annotation( "MESH"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pubic symphysis) AnnotationAssertion(Annotation( ) Annotation( "MP:0009575") "The firm fibrocartilaginous joint in the median plane between the two opposing surfaces of the pubic bones, which are united by an interpubic disc of fibrocartilage as well as the superior and arcuate pubic ligaments.") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0000769") Annotation( "AAO"^^xsd:string) Annotation( "AAO:LAP"^^xsd:string) "Medial attachment of the two halves of the pelvic girdle.[AAO]") AnnotationAssertion( "In birds, the pubic symphysis is present only in the ostrich, and the two hip bones are usually widely separated, making it easier to lay large eggs - Romer, Alfred Sherwood; Parsons, Thomas S. (1977). The Vertebrate Body. Philadelphia, PA: Holt-Saunders International. pp. 188-192. ISBN 0-03-910284-X.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0000769") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37940") AnnotationAssertion( "FMA:16950") AnnotationAssertion( "GAID:267") AnnotationAssertion( "MESH:D011631") AnnotationAssertion( "NCIT:C33425") AnnotationAssertion( "OpenCyc:Mx4rwGw9npwpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Pubic_Symphisis") "UMLS:C0034015") AnnotationAssertion(Annotation( "FMA:16950") "symphysis pubis") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "interpubic articulation") AnnotationAssertion(Annotation( ) "symphisis pubis") AnnotationAssertion(Annotation( ) Annotation( ) "symphysis pubica") AnnotationAssertion(Annotation( ) "symphysis pubis") AnnotationAssertion(Annotation( ) Annotation( ) "symphysis pubis") AnnotationAssertion( "UBERON:0003699") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "pubic symphysis") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/5/51/Gray321.png"^^xsd:anyURI) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (temporomandibular joint) AnnotationAssertion(Annotation( ) "A synovial joint of the jaw that connects the mandible to the temporal bone.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0003674") AnnotationAssertion( "EMAPA:19196") AnnotationAssertion( "FMA:54832") AnnotationAssertion( "GAID:272") AnnotationAssertion( "MA:0002899") AnnotationAssertion( "MESH:D013704") AnnotationAssertion( "NCIT:C32888") AnnotationAssertion(Annotation( "ncithesaurus:Jaw_Joint") "UMLS:C0039493") AnnotationAssertion(Annotation( ) Annotation( "BTO:0003674") "TMJ") AnnotationAssertion(Annotation( "HP:0010754") "temperomandibular joint") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "articulatio temporomandibularis") AnnotationAssertion(Annotation( ) "dentary-squamosal joint") AnnotationAssertion(Annotation( ) "squamosal-dentary joint") AnnotationAssertion(Annotation( ) "tempero-mandibular joint") AnnotationAssertion(Annotation( ) "temporalmandibular joint") AnnotationAssertion(Annotation( ) "temporomandibular") AnnotationAssertion(Annotation( ) "temporomandibular articulation") AnnotationAssertion(Annotation( ) "temporomandibular joint") AnnotationAssertion( "UBERON:0003700") AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "There are two TMJs, one on either side, working in unison. The unique feature of the TMJs is the articular disc. The disc is composed of fibrocartilagenous tissue (like the firm and flexible elastic cartilage of the ear) which is positioned between the two bones that form the joint. The TMJs are one of the only synovial joints in the human body with an articular disc, another being the sternoclavicular joint. The disc divides each joint into two. The lower joint compartment formed by the mandible and the articular disc is involved in rotational movement -- this is the initial movement of the jaw when the mouth opens. The upper joint compartment formed by the articular disk and the temporal bone is involved in translational movement -- this is the secondary gliding motion of the jaw as it is opened widely. The part of the mandible which mates to the under-surface of the disc is the condyle and the part of the temporal bone which mates to the upper surface of the disk is the glenoid (or mandibular) fossa[WP].") AnnotationAssertion(rdfs:label "temporomandibular joint") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/a/a5/Gray309.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA-abduced-lr"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (calcaneal tendon) AnnotationAssertion(Annotation( ) "The Achilles tendon is a tendon of the posterior leg. It serves to attach the plantaris, gastrocnemius (calf) and soleus muscles to the calcaneus (heel) bone.") AnnotationAssertion( "reduced in non-human primates") AnnotationAssertion( "bipedalism, running") AnnotationAssertion(Annotation( "FMA"^^xsd:string) "in FMA this is a ligament, and part of the muscle") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:35853") AnnotationAssertion( "FMA:51061") AnnotationAssertion( "GAID:277") AnnotationAssertion( "MA:0002993") AnnotationAssertion( "MESH:D000125") AnnotationAssertion( "NCIT:C32043") AnnotationAssertion( "OpenCyc:Mx4rvVjNX5wpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Achilles_Tendon") "UMLS:C0001074") AnnotationAssertion( "Achille's tendon") AnnotationAssertion(Annotation( "MA:0002993") "Achilles tendon") AnnotationAssertion( "Achilles' tendon") AnnotationAssertion(Annotation( "FMA:51061") "calcaneal tendon") AnnotationAssertion(Annotation( ) Annotation( ) "tendo Achillis") AnnotationAssertion(Annotation( "MA:0002993") Annotation( ) "tendo calcaneus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003701") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "calcaneal tendon") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/3/3c/Achilles-tendon.jpg"^^xsd:anyURI) SubClassOf(Annotation( "MA"^^xsd:string) ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (inguinal canal) AnnotationAssertion(Annotation( "ISBN:0-683-40008-8"^^xsd:string) Annotation( "MESH:A01.047.412") Annotation( "MP:0003673") "The passage in the lower abdominal wall through which the spermatic cord in the male or the round ligament in the female, nerves and vessels pass from the pelvic cavity to the scrotum or labia majora, respectively.") AnnotationAssertion( "In most mammals the canal remains open, and the testis can pass from the scrotum to the abdominal cavity. In humans the canal closes after testicular descent[DOI:10.1046/j.1469-7580.2002.00087.x]") AnnotationAssertion( "In tammar wallabies, closes between days 50 and 60 pp[DOI:10.1046/j.1469-7580.2002.00087.x]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0005576") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37881") AnnotationAssertion( "FMA:19928") AnnotationAssertion( "GAID:28") AnnotationAssertion( "MESH:A01.047.412") AnnotationAssertion( "NCIT:C93029") AnnotationAssertion(Annotation( "ncithesaurus:Inguinal_Canal") "UMLS:C0021445") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "canalis inguinalis") AnnotationAssertion( "UBERON:0003702") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "inguinal canal") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/b/b4/Gray1227.png"^^xsd:anyURI) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf(Annotation( "Wikipedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (extrahepatic bile duct) AnnotationAssertion(Annotation( "MESH:A03.159.183.079") "Passages external to the liver for the conveyance of bile. These include the common bile duct and the common hepatic duct.") AnnotationAssertion( "includes all the cystic duct, all the common bile duct and the extrahapetic part of the hepatic duct") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:14678") AnnotationAssertion( "GAID:281") AnnotationAssertion( "MA:0002659") AnnotationAssertion( "MESH:D017734") AnnotationAssertion( "NCIT:C32573") AnnotationAssertion(Annotation( "ncithesaurus:Extrahepatic_Bile_Duct") "UMLS:C0206187") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "MA:0002659") "bile duct extrahepatic part") AnnotationAssertion(Annotation( "GAID:281") "extrahepatic biliary system") AnnotationAssertion( "UBERON:0003703") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "extrahepatic bile duct") SubClassOf( ) # Class: (intrahepatic bile duct) AnnotationAssertion(Annotation( "MESH:A03.159.183.158") "Passages within the liver for the conveyance of bile. Includes right and left hepatic ducts even though these may join outside the liver to form the common hepatic duct.") AnnotationAssertion( "includes the hepatic duct of the caudate lobe, and the intra- and inter- lobar bile ducts") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0005169") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "Duct that collects bile from the bile ductules and connects to the extrahepatic bile duct.[TAO]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:15766") AnnotationAssertion( "GAID:287") AnnotationAssertion( "MA:0001630") AnnotationAssertion( "MESH:D001653") AnnotationAssertion( "NCIT:C12677") AnnotationAssertion( "TAO:0005169") AnnotationAssertion(Annotation( "ncithesaurus:Intrahepatic_Bile_Duct") "UMLS:C0005401") AnnotationAssertion( "ZFA:0005169") AnnotationAssertion(Annotation( "MA:0001630") "bile duct intrahepatic part") AnnotationAssertion( "uberon") AnnotationAssertion( "intrahepatic biliary system") AnnotationAssertion( "UBERON:0003704") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "intrahepatic bile duct") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf(Annotation( "MA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (Meckel's diverticulum) AnnotationAssertion(Annotation( ) "A small bulge in the small intestine present at birth. It is a vestigial remnant of the omphalomesenteric duct.") AnnotationAssertion(Annotation( "ncit"^^xsd:string) "finding in ncit; GALT in chickens") AnnotationAssertion( ) AnnotationAssertion( "FMA:14967") AnnotationAssertion( "GAID:317") AnnotationAssertion( "MESH:A03.492.411.620.484.612") AnnotationAssertion( "galen:MeckelsDiverticulum") AnnotationAssertion( "ncithesaurus:Meckel_Diverticulum") AnnotationAssertion(Annotation( "FMA:14967") "Meckel's diverticulum") AnnotationAssertion(Annotation( "FMA:14967") "diverticulum of Meckel") AnnotationAssertion(Annotation( "FMA:14967") "ileal diverticulum") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "GAID:317") "Meckels diverticulum") AnnotationAssertion(Annotation( "GAID:317") "meckel diverticulum") AnnotationAssertion( "UBERON:0003705") AnnotationAssertion(rdfs:label "Meckel's diverticulum") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "Wikipedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (laryngeal vocal fold) AnnotationAssertion(Annotation( ) "Either of two pairs of folds of mucous membrane projecting into the larynx.") AnnotationAssertion( "we follow FMA in modeling this is mucous membrane plus ligament") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0005084") AnnotationAssertion( "EMAPA:19181") AnnotationAssertion( "FMA:55457") AnnotationAssertion( "GAID:344") AnnotationAssertion( "MESH:D014827") AnnotationAssertion( "NCIT:C12822") AnnotationAssertion( "OpenCyc:Mx4rvVieepwpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Vocal_Cord") "UMLS:C0042930") AnnotationAssertion(Annotation( "FMA:55457") "true vocal cord") AnnotationAssertion(Annotation( "FMA:55457") "vocal cord") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0005084") "plica vocalis") AnnotationAssertion(Annotation( "BTO:0005084") "vocal band") AnnotationAssertion(Annotation( "BTO:0005084") "vocal chord") AnnotationAssertion(Annotation( "MESH:A04.329.364.737") "vocal fold") AnnotationAssertion( "UBERON:0003706") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "laryngeal vocal fold") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "BTO"^^xsd:string) Annotation( "FMA-abduced") ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA-abduced-lr"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (sinus of Valsalva) AnnotationAssertion(Annotation( ) "One of the anatomic dilations of the ascending aorta, which occurs just above the aortic valve.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:18625") AnnotationAssertion( "FMA:3745") AnnotationAssertion( "GAID:472") AnnotationAssertion( "MA:0003051") AnnotationAssertion( "MESH:D012850") AnnotationAssertion( "NCIT:C33557") AnnotationAssertion(Annotation( "ncithesaurus:Sinus_of_Valsava") "UMLS:C0503361") AnnotationAssertion(Annotation( "MP:0010483") "Petit sinus") AnnotationAssertion(Annotation( ) "Petit's sinus") AnnotationAssertion(Annotation( "MP:0010483") "Valsalva sinus") AnnotationAssertion(Annotation( "MP:0010483") "aortic sinus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "sinus aorta") AnnotationAssertion(Annotation( ) "sinus aortae") AnnotationAssertion(Annotation( ) Annotation( ) "sinus aortae") AnnotationAssertion(Annotation( ) "sinus of Morgagni") AnnotationAssertion(Annotation( ) "sinus of Otto") AnnotationAssertion( "UBERON:0003707") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "sinus of Valsalva") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/5/54/Gray497.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) Annotation( "MP"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (carotid sinus) AnnotationAssertion(Annotation( ) "A localized dilation of the internal carotid artery at its origin, the common carotid artery bifurcation.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:19320") AnnotationAssertion( "FMA:50094") AnnotationAssertion( "GAID:482") AnnotationAssertion( "MESH:D002346") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "carotid bulb") AnnotationAssertion(Annotation( ) Annotation( ) "sinus caroticus") AnnotationAssertion( "UBERON:0003708") AnnotationAssertion(rdfs:label "carotid sinus") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/9/9c/Gray513.png"^^xsd:anyURI) SubClassOf( ) # Class: (circle of Willis) AnnotationAssertion(Annotation( ) "A circle of arteries that supply blood to the brain. The Circle of Willis comprises the following arteries: Anterior cerebral artery (left and right); Anterior communicating artery; Internal carotid artery (left and right); Posterior cerebral artery (left and right); Posterior communicating artery (left and right).The basilar artery and middle cerebral arteries, supplying the brain, are also considered part of the circle.") AnnotationAssertion(Annotation( ) "In zebrafish, the circle of vessels comprised of the basal communicating artery (BCA) and posterior communicating segments (PCS) superficially resemble but are not homologous to the human circle of Willis") AnnotationAssertion(Annotation( ) "arterial circle") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0000252") AnnotationAssertion( "EHDAA:9758") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37829") AnnotationAssertion( "FMA:50454") AnnotationAssertion( "GAID:486") AnnotationAssertion( "MESH:D002941") AnnotationAssertion( "OpenCyc:Mx4rwSrCwJwpEbGdrcN5Y29ycA") AnnotationAssertion( "arterial circle of Willis") AnnotationAssertion(Annotation( "GAID:486") "cerebral arterial circle") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "GAID:486") "Willis circle") AnnotationAssertion(Annotation( ) Annotation( ) "circulus arteriosus cerebri") AnnotationAssertion( "UBERON:0003709") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "circle of Willis") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/2/2e/Circle_of_Willis_en.svg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "FMA-modified") ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) SubClassOf(Annotation( "FMA-modified") ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) # Class: (vasa vasorum) AnnotationAssertion(Annotation( ) Annotation( "MESH:A07.231.836") "Nutrient blood vessels which supply the walls of large arteries or veins.") AnnotationAssertion( "The aorta of swine contains a vaso vasorum like humans - http://www.nal.usda.gov/awic/pubs/swine/swine.htm#art") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:77433") AnnotationAssertion( "GAID:526") AnnotationAssertion( "MESH:D014651") AnnotationAssertion( "NCIT:C33852") AnnotationAssertion(Annotation( "ncithesaurus:Vasa_Vasorum") "UMLS:C0042367") AnnotationAssertion(Annotation( "FMA:77433") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "vas vasorum") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003710") AnnotationAssertion(rdfs:label "vasa vasorum") SubClassOf( ) # Class: (brachiocephalic vein) AnnotationAssertion(Annotation( ) "The left and right brachiocephalic veins in the upper chest are formed by the union of each corresponding internal jugular vein and subclavian vein. This is at the level of the sternoclavicular joint. These great vessels merge to form the superior vena cava. The brachiocephalic veins are the major veins returning blood to the superior vena cava.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0000182") AnnotationAssertion( "EHDAA:9868") AnnotationAssertion( "FMA:4723") AnnotationAssertion( "GAID:529") AnnotationAssertion( "MESH:D016121") AnnotationAssertion( "NCIT:C32816") AnnotationAssertion( "OpenCyc:Mx4rvz3aUJwpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Innominate_Vein") "UMLS:C0006095") AnnotationAssertion( "galen:BrachiocephalicVein") AnnotationAssertion(Annotation( "FMA:4723") "brachiocephalic venous tree") AnnotationAssertion(Annotation( "FMA:4723") "innominate vein") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "innomiate vein") AnnotationAssertion(Annotation( ) "innominate trunk") AnnotationAssertion(Annotation( ) "innominate vein") AnnotationAssertion(Annotation( "GAID:529") "innominate vein") AnnotationAssertion(Annotation( ) "innominate veins") AnnotationAssertion(Annotation( ) "vena brachiocephalica") AnnotationAssertion(Annotation( ) Annotation( ) "vena brachiocephalica") AnnotationAssertion(Annotation( ) Annotation( ) "venae anonyma") AnnotationAssertion( "UBERON:0003711") AnnotationAssertion(rdfs:label "brachiocephalic vein") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/9/9e/Gray1174.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (cavernous sinus) AnnotationAssertion(Annotation( ) "The cavernous sinus (or lateral sellar compartment), within the human head, is a large collection of thin-walled veins creating a cavity bordered by the temporal bone of the skull and the sphenoid bone, lateral to the sella turcica.") AnnotationAssertion(Annotation( "MESH:A07.231.908.224.334") "An irregularly shaped venous space in the dura mater at either side of the sphenoid bone[MESH:A07.231.908.224.334].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:19059") AnnotationAssertion( "FMA:50772") AnnotationAssertion( "GAID:532") AnnotationAssertion( "MESH:D002426") AnnotationAssertion( "NCIT:C12690") AnnotationAssertion( "OpenCyc:Mx4rwKAVGJwpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Cavernous_Sinus") "UMLS:C0007473") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "cavernous") AnnotationAssertion(Annotation( ) "cavernous sinus syndrome") AnnotationAssertion(Annotation( ) "cavernous sinuses") AnnotationAssertion(Annotation( ) "cavernus sinus vein") AnnotationAssertion(Annotation( ) "parasellar syndrome") AnnotationAssertion(Annotation( ) "sinus cavernosus") AnnotationAssertion( "UBERON:0003712") AnnotationAssertion(rdfs:label "cavernous sinus") SubClassOf( ) # Class: (splenic vein) AnnotationAssertion(Annotation( "ncithesaurus:Splenic_Vein") "A vein arising from the splenic trabecular vein in the hilum of the spleen that drains into the portal vein.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37226") AnnotationAssertion( "FMA:14331") AnnotationAssertion( "GAID:541") AnnotationAssertion( "MA:0002164") AnnotationAssertion( "MESH:D013162") AnnotationAssertion( "NCIT:C33608") AnnotationAssertion( "OpenCyc:Mx4rwCt0eZwpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Splenic_Vein") "UMLS:C0038001") AnnotationAssertion( "galen:SplenicVein") AnnotationAssertion(Annotation( "FMA:14331") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "vena splenica") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( "MA:0002164") "lienal vein") AnnotationAssertion(Annotation( ) Annotation( ) "vena lienalis") AnnotationAssertion( "UBERON:0003713") AnnotationAssertion(rdfs:label "splenic vein") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/5/5b/Gray1189.png"^^xsd:anyURI) AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/e/e4/Bilebladder.png"^^xsd:anyURI) SubClassOf( ) # Class: (neural tissue) AnnotationAssertion(Annotation( "FMA:9642") "Portion of tissue in the nervous system which consists of neurons and glial cells, and may also contain parts of the vasculature.") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0000325") Annotation( "AAO"^^xsd:string) Annotation( "AAO:LAP"^^xsd:string) "One of the four types of tissue in traditional classifications. Cells forming the brain, spinal cord and peripheral nervous system.[AAO]") AnnotationAssertion(Annotation( "FMA"^^xsd:string) "FMA definition includes vasculature") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0000325") AnnotationAssertion( "AEO:0000123") AnnotationAssertion( "EHDAA2:0003123") AnnotationAssertion( "FMA:9642") AnnotationAssertion( "GAID:609") AnnotationAssertion( "MESH:D009417") AnnotationAssertion( "NCIT:C13052") AnnotationAssertion( "OpenCyc:Mx4rVmfYCsQ_QdeM_bFAeS8NRQ") AnnotationAssertion(Annotation( "ncithesaurus:Nervous_Tissue") "UMLS:C0027757") AnnotationAssertion(Annotation( "FMA:9642") "nerve tissue") AnnotationAssertion(Annotation( "FMA:9642") "nervous tissue") AnnotationAssertion(Annotation( "FMA:9642") "portion of neural tissue") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003714") AnnotationAssertion(rdfs:label "neural tissue") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses( ) # Class: (splanchnic nerve) AnnotationAssertion(Annotation( "MP:0008318") "The major nerves supplying sympathetic innervation to the abdomen, including the greater, lesser, and lowest (or smallest) splanchnic nerves that are formed by preganglionic fibers from the spinal cord which pass through the paravertebral ganglia and then to the celiac ganglia and plexuses and the lumbar splanchnic nerves carry fibers which pass through the lumbar paravertebral ganglia to the mesenteric and hypogastric ganglia.") AnnotationAssertion( "All carry sympathetic fibers except for the pelvic splanchnic nerves, which carry parasympathetic fibers") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:spn") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37959") AnnotationAssertion( "FMA:5883") AnnotationAssertion( "GAID:800") AnnotationAssertion( "MESH:D013153") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BAMS:spn") "splanchnic nerves") AnnotationAssertion(Annotation( ) "visceral nerve") AnnotationAssertion( "UBERON:0003715") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "splanchnic nerve") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (recurrent laryngeal nerve) AnnotationAssertion(Annotation( ) "A branch of the vagus nerve that supplies motor function and sensation to the larynx (voice box). It travels within the endoneurium. It is the nerve of the 6th Branchial Arch.") AnnotationAssertion(Annotation( "AAO:0010754") "Branch of the vagus nerve that separates from the vagus well postcranially, then continues anteriorly to innervate the larynx[AAO:0010754].") AnnotationAssertion(Annotation( ) "recurrent nerve") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010754") AnnotationAssertion( "FMA:6246") AnnotationAssertion( "GAID:804") AnnotationAssertion( "MESH:D012009") AnnotationAssertion( "VHOG:0001347") AnnotationAssertion(Annotation( ) Annotation( ) "nervus laryngeus recurrens") AnnotationAssertion( "recurrent laryngeal nerve from vagus nerve") AnnotationAssertion(Annotation( "VHOG:0001347") "vagus X nerve recurrent laryngeal branch") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "GAID:804") "inferior laryngeal nerve") AnnotationAssertion(Annotation( "AAO:0010754") "ramus recurrens") AnnotationAssertion( "UBERON:0003716") AnnotationAssertion(rdfs:label "recurrent laryngeal nerve") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "Wikipedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (muscle spindle) AnnotationAssertion(Annotation( "MP:0004069") "The sensory organs in muscle that are involved in the stretch reflex.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:83607") AnnotationAssertion( "GAID:819") AnnotationAssertion( "MESH:A08.800.550.700.500.500") AnnotationAssertion( "NCIT:C13824") AnnotationAssertion(Annotation( "ncithesaurus:Muscle_Spindle") "UMLS:C0027871") AnnotationAssertion(Annotation( "FMA:83607") "neuromuscular spindle") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "GAID:819") "muscle stretch receptor") AnnotationAssertion(Annotation( "GAID:819") "neuromuscular spindle") AnnotationAssertion( "UBERON:0003718") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "muscle spindle") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (Pacinian corpuscle) AnnotationAssertion(Annotation( ) Annotation( "MP:0000988") "Any of the rapidly adapting mechanoreceptors found in subcutaneous tissue beneath both hairy and glabrous skin, and which normally contain an afferent nerve fiber surrounded by a capsule with multiple concentric layers.") AnnotationAssertion( "may also be present in the mesentery of cats, in pancreas, in lymph nodes [ISBN:9780849388118]") AnnotationAssertion( "consists of a nerve fiber, an inner core of modified Schwann cells, a subcapsular space and a capsule [ISBN:9780849388118]") AnnotationAssertion(Annotation( "FMA"^^xsd:string) "FMA treats pacinia and G-M as distinct") AnnotationAssertion( "UBERON:0003717") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:83604") AnnotationAssertion( "FMA:83609") AnnotationAssertion( "GAID:817") AnnotationAssertion( "GAID:820") AnnotationAssertion( "MESH:A08.800.550.700.500.300") AnnotationAssertion( "MESH:A08.800.550.700.500.700") AnnotationAssertion( "NCIT:C13172") AnnotationAssertion( "NIF_Subcellular:FMA_83604") AnnotationAssertion(Annotation( ) "Pacinian corpuscle") AnnotationAssertion(Annotation( "FMA:83609") "corpuscle of golgi-mazzoni") AnnotationAssertion(Annotation( ) Annotation( ) "corpusculum lamellosum") AnnotationAssertion(Annotation( "FMA:83609") "golgi-mazzoni corpuscle") AnnotationAssertion(Annotation( ) "lamellar corpuscle") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "GAID:817") "golgi mazzoni corpuscle") AnnotationAssertion(Annotation( ) "golgi-mazzoni") AnnotationAssertion(Annotation( ) "golgi-mazzoni corpuscles") AnnotationAssertion(Annotation( ) "lamellated corpuscle") AnnotationAssertion(Annotation( ) "pacinian body") AnnotationAssertion(Annotation( ) "pacinian corpuscle") AnnotationAssertion(Annotation( ) "pacinian corpuscle end-organs") AnnotationAssertion(Annotation( ) "pacinian corpuscles") AnnotationAssertion(Annotation( ) "vater-pacini corpuscle") AnnotationAssertion(Annotation( ) "vater-pacini corpuscles") AnnotationAssertion( "UBERON:0003719") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "Pacinian corpuscle") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/5/52/Gray935.png"^^xsd:anyURI) SubClassOf(Annotation( "Wikipedia"^^xsd:string) ) SubClassOf(Annotation( "may also be located in organs - check") ObjectSomeValuesFrom( )) # Class: (anterior cranial fossa) AnnotationAssertion(Annotation( ) "The floor of the anterior fossa is formed by the orbital plates of the frontal, the cribriform plate of the ethmoid, and the small wings and front part of the body of the sphenoid; it is limited behind by the posterior borders of the small wings of the sphenoid and by the anterior margin of the chiasmatic groove. The lesser wings of the sphenoid separate the anterior and middle fossae.") AnnotationAssertion( "anterior fossa") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:9682") AnnotationAssertion( "GAID:83") AnnotationAssertion( "MESH:D035262") AnnotationAssertion( "NCIT:C32090") AnnotationAssertion(Annotation( "ncithesaurus:Anterior_Fossa") "UMLS:C0230044") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "fossa cranii anterior") AnnotationAssertion( "UBERON:0003720") AnnotationAssertion(rdfs:label "anterior cranial fossa") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/8/81/Gray193.png"^^xsd:anyURI) SubClassOf( ) DisjointClasses(Annotation( "lexical"^^xsd:string) ) # Class: (lingual nerve) AnnotationAssertion(Annotation( ) "The lingual nerve is a branch of the mandibular nerve (CN V3), itself a branch of the trigeminal nerve, which supplies sensory innervation to the tongue. It also carries fibers from the facial nerve, which return taste information from the anterior two thirds of the tongue.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:5lg") AnnotationAssertion( "EMAPA:19168") AnnotationAssertion( "FMA:53218") AnnotationAssertion( "GAID:835") AnnotationAssertion( "MA:0001102") AnnotationAssertion( "MESH:D008036") AnnotationAssertion( "lingual branch of trigeminal nerve") AnnotationAssertion(Annotation( "MA:0001102") "trigeminal V nerve lingual branch") AnnotationAssertion( "trigeminal nerve lingual branch") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003721") AnnotationAssertion(rdfs:label "lingual nerve") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (middle cranial fossa) AnnotationAssertion(Annotation( ) Annotation( "MESH:A01.456.830.165") "The compartment containing the anterior extremities and half the inferior surface of the temporal lobes (TEMPORAL LOBE) of the cerebral hemispheres. Lying posterior and inferior to the anterior cranial fossa (CRANIAL FOSSA, ANTERIOR), it is formed by part of the TEMPORAL BONE and SPHENOID BONE. It is separated from the posterior cranial fossa (CRANIAL FOSSA, POSTERIOR) by crests formed by the superior borders of the petrous parts of the temporal bones[MESH]. The middle fossa, deeper than the anterior cranial fossa, is narrow medially and widens laterally to the sides of the skull. It is separated from the posterior fossa by the clivus and the petrous crest. It is bounded in front by the posterior margins of the lesser wings of the sphenoid bone, the anterior clinoid processes, and the ridge forming the anterior margin of the chiasmatic groove; behind, by the superior angles of the petrous portions of the temporal bones and the dorsum sellC&; laterally by the temporal squamC&, sphenoidal angles of the parietals, and greater wings of the sphenoid. It is traversed by the squamosal, sphenoparietal, sphenosquamosal, and sphenopetrosal sutures[WP].") AnnotationAssertion(Annotation( ) "middle fossa") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:54369") AnnotationAssertion( "GAID:84") AnnotationAssertion( "MESH:D035301") AnnotationAssertion( "NCIT:C33117") AnnotationAssertion(Annotation( "ncithesaurus:Middle_Fossa") "UMLS:C0230045") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "fossa cranii media") AnnotationAssertion( "UBERON:0003722") AnnotationAssertion(rdfs:label "middle cranial fossa") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/8/81/Gray193.png"^^xsd:anyURI) SubClassOf( ) # Class: (vestibular nerve) AnnotationAssertion(Annotation( ) "The vestibular nerve is one of the two branches of the Vestibulocochlear nerve (the cochlear nerve being the other). It goes to the semicircular canals via the vestibular ganglion. It receives positional information. Axons of the vestibular nerve synapse in the vestibular nucleus on the lateral floor and wall of the fourth ventricle in the pons and medulla. It arises from bipolar cells in the vestibular ganglion, ganglion of Scarpa, which is situated in the upper part of the outer end of the internal auditory meatus. [WP,unvetted].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:vVIIIn") AnnotationAssertion( "DHBA:12869") AnnotationAssertion( "EHDAA2:0002200") AnnotationAssertion( "EHDAA:3749") AnnotationAssertion( "EMAPA:17803") AnnotationAssertion( "FMA:53401") AnnotationAssertion( "GAID:840") AnnotationAssertion( "MA:0001111") AnnotationAssertion( "MBA:413") AnnotationAssertion( "MESH:D014725") AnnotationAssertion( "NCIT:C12820") AnnotationAssertion( "OpenCyc:Mx4rvxAWX5wpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Vestibular_Nerve") "UMLS:C0042598") AnnotationAssertion( "VHOG:0001181") AnnotationAssertion(Annotation( "FMA:53401") "vestibular root of acoustic nerve") AnnotationAssertion(Annotation( "FMA:53401") "vestibular root of eighth cranial nerve") AnnotationAssertion(Annotation( "MA:0001111") "vestibulocochlear VIII nerve vestibular component") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "nervus vestibularis") AnnotationAssertion(Annotation( "GAID:840") "scarpa ganglion") AnnotationAssertion(Annotation( "GAID:840") "scarpa's ganglion") AnnotationAssertion(Annotation( "GAID:840") "scarpas ganglion") AnnotationAssertion(Annotation( "BAMS:vVIIIn") "vestibulocochlear nerve vestibular root") AnnotationAssertion( "UBERON:0003723") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "vestibular nerve") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/6/65/Vestibular_system%27s_semicircular_canal-_a_cross-section.jpg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (musculocutaneous nerve) AnnotationAssertion(Annotation( ) "A large branch of the brachial plexus supplying various parts of the upper arm (as flexor muscles) and forearm (as the skin).") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:37064") AnnotationAssertion( "GAID:844") AnnotationAssertion( "MESH:D009138") AnnotationAssertion( "OpenCyc:Mx4rvzp0l5wpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "FMA:37064") "casserio's nerve") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "nervus musculocutaneus") AnnotationAssertion( "UBERON:0003724") AnnotationAssertion(rdfs:label "musculocutaneous nerve") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/a/a7/Nerves_of_the_left_upper_extremity.gif"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (cervical nerve plexus) AnnotationAssertion(Annotation( "UBERON:cjm"^^xsd:string) "An arrangement of nerve fibers, running from the spine that travels to the head and neck where it innervates skin and muscle.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:cep") AnnotationAssertion( "FMA:5904") AnnotationAssertion( "GAID:847") AnnotationAssertion( "MESH:D002572") AnnotationAssertion( "OpenCyc:Mx4rvkEE3JwpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "FMA:5904") "cervical nerve plexus") AnnotationAssertion(Annotation( "FMA:5904") "cervical plexus") AnnotationAssertion(Annotation( "FMA:5904") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "plexus cervicalis") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "plexus cervicalis") AnnotationAssertion( "UBERON:0003725") AnnotationAssertion(rdfs:label "cervical nerve plexus") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/2/20/Gray784.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (thoracic nerve) AnnotationAssertion(Annotation( "MESH:A08.800.800.720.800") "The twelve spinal nerves on each side of the thorax. They include eleven INTERCOSTAL NERVES and one subcostal nerve. Both sensory and motor, they supply the muscles and skin of the thoracic and abdominal walls.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:5860") AnnotationAssertion( "GAID:857") AnnotationAssertion( "MESH:D013900") AnnotationAssertion( "OpenCyc:Mx4rwSJp_ZwpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "FMA:5860") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "nervus thoracis") AnnotationAssertion(Annotation( "FMA:5860") "thoracic spinal nerve") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "nervi thoracici") AnnotationAssertion(Annotation( "GAID:857") "pectoral nerve") AnnotationAssertion( "UBERON:0003726") AnnotationAssertion(rdfs:label "thoracic nerve") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (intercostal nerve) AnnotationAssertion(Annotation( ) "The intercostal nerves are the anterior divisions (rami anteriores; ventral divisions) of the thoracic spinal nerves from T1 to T11. Each nerve is connected with the adjoining ganglion of the sympathetic trunk by a gray and a white ramus communicans. The intercostal nerves are distributed chiefly to the thoracic pleura and abdominal peritoneum and differ from the anterior divisions of the other spinal nerves in that each pursues an independent course without plexus formation. The first two nerves supply fibers to the upper limb in addition to their thoracic branches; the next four are limited in their distribution to the parietes of the thorax; the lower five supply the parietes of the thorax and abdomen. The 7th intercostal nerve terminates at the xyphoid process, at the lower end of the sternum. The 10th intercostal nerve terminates at the umbilicus. The twelfth thoracic is distributed to the abdominal wall and groin. [WP,unvetted].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:18227") AnnotationAssertion( "FMA:6028") AnnotationAssertion( "GAID:858") AnnotationAssertion( "MESH:D007367") AnnotationAssertion( "NCIT:C32825") AnnotationAssertion(Annotation( "ncithesaurus:Intercostal_Nerve") "UMLS:C1285089") AnnotationAssertion(Annotation( "FMA:6028") "anterior ramus of thoracic nerve") AnnotationAssertion(Annotation( "FMA:6028") "anterior ramus of thoracic spinal nerve") AnnotationAssertion(Annotation( "FMA:6028") "ramus anterior, nervus thoracicus") AnnotationAssertion(Annotation( "FMA:6028") "thoracic anterior ramus") AnnotationAssertion(Annotation( "FMA:6028") "ventral ramus of thoracic spinal nerve") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "nervi intercostales") AnnotationAssertion( "UBERON:0003727") AnnotationAssertion(rdfs:label "intercostal nerve") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/b/b1/Gray819.png"^^xsd:anyURI) SubClassOf( ) # Class: (mediastinum) AnnotationAssertion(Annotation( ) Annotation( "UBERON:cjm"^^xsd:string) "The central part of the thoracic cavity enclosed by the left and right pleurae.") AnnotationAssertion( "mediastinal") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "CALOHA:TS-2338") AnnotationAssertion( "EFO:0003057") AnnotationAssertion( "EMAPA:36001") AnnotationAssertion( "FMA:9826") AnnotationAssertion( "GAID:94") AnnotationAssertion( "MA:0003075") AnnotationAssertion( "MESH:A01.911.800.500") AnnotationAssertion( "NCIT:C12748") AnnotationAssertion( "OpenCyc:Mx4rv2OKJ5wpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Mediastinum") "UMLS:C0025066") AnnotationAssertion(Annotation( "FMA:9826") "mediastinal part of chest") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003728") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "mediastinum") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/a/ab/Mediastinum.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (mouth mucosa) AnnotationAssertion(Annotation( ) "A mucous membrane that lines the mouth.") AnnotationAssertion( "this is defined as any mucous membrane of the mouth - including palate, lips, uvula, etc. ncit split mouth/oral mucosa into lip and buccal. In future we may split into masticatory/keratinized (gingiva + hard palate) vs lining/non-keratinized (lips, cheeks, floor of mouth, soft palate). FMA distinguishes between mucosa of mouth and region of mouth (the latter including the buccal mucosa)") AnnotationAssertion(Annotation( ) "the mucous membrane epithelium of the mouth. It can be divided into three categories: masticatory, lining, and specialized[Wikipedia:Oral_mucosa].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0002860") AnnotationAssertion( "CALOHA:TS-0716") AnnotationAssertion( "EMAPA:26937") AnnotationAssertion( "FMA:59660") AnnotationAssertion( "GAID:951") AnnotationAssertion( "MA:0002794") AnnotationAssertion( "MESH:D009061") AnnotationAssertion( "NCIT:C77637") AnnotationAssertion(Annotation( "ncithesaurus:Oral_Mucosa") "UMLS:C0026639") AnnotationAssertion(Annotation( "FMA:59660") "mouth mucosa") AnnotationAssertion(Annotation( "OBOL:accepted"^^xsd:string) "mouth mucous membrane") AnnotationAssertion(Annotation( "OBOL:accepted"^^xsd:string) "mouth organ mucosa") AnnotationAssertion(Annotation( "OBOL:accepted"^^xsd:string) "mucosa of mouth") AnnotationAssertion(Annotation( "FMA:59660") "mucous membrane of mouth") AnnotationAssertion( "oral mucous membrane") AnnotationAssertion(Annotation( "FMA:59660") "oral part of viscerocranial mucosa") AnnotationAssertion(Annotation( "FMA:59660") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "tunica mucosa oris") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "GAID:951") "buccal mucosa") AnnotationAssertion(Annotation( "MA:0002794") "mucosal lining of mouth") AnnotationAssertion(Annotation( "GAID:951") "oral mucosa") AnnotationAssertion(Annotation( ) Annotation( ) "tunica mucosa oris") AnnotationAssertion( "UBERON:0003729") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "mouth mucosa") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (prostate bud) AnnotationAssertion(Annotation( "GO:0060513") "A region of the fetal urogenital sinus epithelium destined to become the prostate[GO].") AnnotationAssertion( "AR activation releases instructive signals from UGM that acts on UGS epithelium (UGE) to stimulate cell proliferation, form prostate ductal progenitors (prostatic buds), and regulate cell adhesion dynamics to permit prostatic bud outgrowth. There are three phases of prostatic budding: (1) the specification phase, when instructive developmental cues define where buds will form in the UGS, (2) the initiation phase, when prostatic buds begin to form, and (3) the elongation phase, when proliferation, cell adhesion, and cell migration coordinate outgrowth of prostatic buds into UGM. Timing of prostatic bud formation and the quantity and pattern of buds that are formed in the UGS are strictly regulated [3, 4]. The position of prostatic buds as they emerge from the UGS in utero determines the arrangement of prostate ducts in adulthood.[PMID:18977204]") AnnotationAssertion( "EMAPA:36141") AnnotationAssertion(Annotation( ) "prostate ductal progenitor") AnnotationAssertion( "prostatic bud") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "EMAPA:36141") "prostate gland bud") AnnotationAssertion( "prostate primordium") AnnotationAssertion( "UBERON:0003820") AnnotationAssertion(rdfs:label "prostate bud") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (metapodium bone) AnnotationAssertion(Annotation( ) "A bone of the metapodial skeleton.") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37284") AnnotationAssertion( "MA:0000301") AnnotationAssertion( "metacarpal or metatarsal bone") AnnotationAssertion( "metacarpal/metatarsal") AnnotationAssertion(Annotation( "MA:0000301") "metacarpal/metatarsal bone") AnnotationAssertion(Annotation( ) "metapodi bone") AnnotationAssertion(Annotation( ) "metapodial bone") AnnotationAssertion(Annotation( ) Annotation( ) "metapodium bone") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003821") AnnotationAssertion(rdfs:label "metapodium bone") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "https://github.com/obophenotype/uberon/wiki/Skeleton-partonomy-Design-Pattern") ObjectSomeValuesFrom( )) # Class: (forelimb stylopod) AnnotationAssertion(Annotation( ) "The part of the forelimb between pectoral region and the elbow, corresponding to the humerus.") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0000887") Annotation( "AAO"^^xsd:string) Annotation( "AAO:LAP"^^xsd:string) "Segment of the hindleg corresponding to the humerus.[AAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000343") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0198540472 Janvier P, Early vertebrates (1996) p.268"^^xsd:string) "Most anatomists now agree that the three proximal bones of the tetrapod limbs are homologous to the two or three proximal elements of the paired fin skeleton of other sarcopterygians, that is the humerus-femur, radius-tibia, and ulna-fibula.[well established][VHOG]") AnnotationAssertion( "anatomical usage, the term arm refers specifically to the segment between the shoulder and the elbow, while the segment between the elbow and wrist is the forearm. However, in common, literary, and historical usage, arm refers to the entire upper limb from shoulder to wrist. FMA uses the term Arm for this class, so we place it here. Naming conventions for pod terms under discussion within phenoscape group.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0000199") AnnotationAssertion( "EHDAA2:0002112") AnnotationAssertion( "EHDAA:4186") AnnotationAssertion( "EHDAA:6234") AnnotationAssertion( "EMAPA:17424") AnnotationAssertion( "FMA:24890") AnnotationAssertion( "MA:0000035") AnnotationAssertion( "MESH:D001132") AnnotationAssertion( "NCIT:C32141") AnnotationAssertion( "OpenCyc:Mx4rvVj0Z5wpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Arm") "UMLS:C0446516") AnnotationAssertion( "VHOG:0000343") AnnotationAssertion( "VSAO:0005057") AnnotationAssertion( "galen:Arm") AnnotationAssertion( "brachial region") AnnotationAssertion(Annotation( "VSAO:0005057") "brachium") AnnotationAssertion(Annotation( "AAO:0000199") "fore propodium") AnnotationAssertion( "forelimb propodium") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "forelimb stylopodial element") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "forelimb stylopodium") AnnotationAssertion( "proximal segment of free upper limb") AnnotationAssertion(Annotation( "FMA:24890") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "regio brachialis") AnnotationAssertion( "stylopod of arm") AnnotationAssertion( "stylopod of forelimb") AnnotationAssertion(Annotation( "MA:0000035") Annotation( ) "upper arm") AnnotationAssertion(Annotation( "NCBITaxon:8782"^^xsd:string) Annotation( "OBOL:automatic"^^xsd:string) Annotation( ) "wing stylopod") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:24890") Annotation( ) "arm") AnnotationAssertion( "UBERON:0003822") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "forelimb stylopod") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "MA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (hindlimb zeugopod) AnnotationAssertion(Annotation( "PHENOSCAPE:curators"^^xsd:string) "The middle limb segment of the pelvic free limb, between the autopod and stylopod segments. Includes as parts the hindlimb zeugopodial skeleton, which includes as parts the tibia and fibula, or their cartilage precursors, or evolutionary variants.") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000348") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0198540472 Janvier P, Early vertebrates (1996) p.268"^^xsd:string) "Most anatomists now agree that the three proximal bones of the tetrapod limbs are homologous to the two or three proximal elements of the paired fin skeleton of other sarcopterygians, that is the humerus-femur, radius-tibia, and ulna-fibula.[well established][VHOG]") AnnotationAssertion( "sural") AnnotationAssertion(Annotation( "FMA"^^xsd:string) "FMA:24979 denotes the middle segment (zeugopod), its placement here is correct. See obo-anatomy archives for discussion") AnnotationAssertion( "Naming conventions for pod terms under discussion within phenoscape group. TODO - add distinct term for skeleton and place AAO class here") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EFO:0003051") AnnotationAssertion( "EHDAA2:0001030") AnnotationAssertion( "EHDAA:5165") AnnotationAssertion( "EHDAA:6190") AnnotationAssertion( "EMAPA:17496") AnnotationAssertion( "FMA:24979") AnnotationAssertion( "FMA:24984") AnnotationAssertion( "MA:0000051") AnnotationAssertion( "MESH:D007866") AnnotationAssertion( "NCIT:C32974") AnnotationAssertion( "OpenCyc:Mx4rvczZBpwpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Leg") "UMLS:C1140621") AnnotationAssertion( "VHOG:0000348") AnnotationAssertion( "VSAO:0005060") AnnotationAssertion( "galen:Leg") AnnotationAssertion(Annotation( "FMA:24984") "calf of leg") AnnotationAssertion(Annotation( "VSAO:0005060") "crus") AnnotationAssertion( "crus of hindlimb") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "hind limb middle limb segment") AnnotationAssertion(Annotation( "VHOG:0000348") "hind limb zeudopodium") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "hind limb zeugopod") AnnotationAssertion( "hindlimb epipodium") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "hindlimb middle limb segment") AnnotationAssertion(Annotation( "VHOG:0000348") "hindlimb zeudopodium") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "hindlimb zeugopod") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "hindlimb zeugopodium") AnnotationAssertion(Annotation( "FMA:24979") "intermediate segment of free lower limb") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "lower extremity middle limb segment") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "lower extremity zeugopod") AnnotationAssertion(Annotation( "MA:0000051") Annotation( ) "lower leg") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "middle limb segment of hind limb") AnnotationAssertion(Annotation( ) "middle limb segment of hindlimb") AnnotationAssertion(Annotation( "FMA:24984") "posterior curral region") AnnotationAssertion(Annotation( "FMA:24984") "posterior leg region") AnnotationAssertion(Annotation( "FMA:24984") "posterior part of leg") AnnotationAssertion(Annotation( "FMA:24984") "posterior region of leg") AnnotationAssertion(Annotation( "FMA:24984") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "regio cruris posterior") AnnotationAssertion(Annotation( "FMA:24984") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "regio surae") AnnotationAssertion(Annotation( "VSAO:0005060") "shank") AnnotationAssertion(Annotation( "FMA:24984") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "sura") AnnotationAssertion(Annotation( "FMA:24984") "sural region") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "zeugopod of hind limb") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "zeugopod of hindlimb") AnnotationAssertion( "calf") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "hind epipodium") AnnotationAssertion(Annotation( "FMA:24979") Annotation( "MESH:A01.378.610.500") Annotation( ) "leg") AnnotationAssertion( "UBERON:0003823") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "hindlimb zeugopod") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "MA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (nerve of thoracic segment) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A nerve that is part of a thorax [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37265") AnnotationAssertion( "MA:0000562") AnnotationAssertion( "MESH:D013900") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "nerve of thorax") AnnotationAssertion(Annotation( "MA:0000562") "thoracic segment nerve") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "thorax nerve") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "MA:0000562") "upper body nerve") AnnotationAssertion( "UBERON:0003824") AnnotationAssertion(rdfs:label "nerve of thoracic segment") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (nerve of abdominal segment) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A nerve that is part of an abdominal segment of trunk [Automatically generated definition].") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37061") AnnotationAssertion( "MA:0000528") AnnotationAssertion(Annotation( "MA:0000528") "abdominal segment nerve") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003825") AnnotationAssertion(rdfs:label "nerve of abdominal segment") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (upper leg bone) AnnotationAssertion(Annotation( ) Annotation( "OBOL:automatic"^^xsd:string) "A bone that is part of a hindlimb stylopod [Automatically generated definition].") AnnotationAssertion( "EMAPA:35893") AnnotationAssertion( "MA:0000682") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "femur") AnnotationAssertion( "UBERON:0003826") AnnotationAssertion(rdfs:comment "May be merged into femur. See https://sourceforge.net/tracker/index.php?func=detail&aid=3586533&group_id=76834&atid=1205376") AnnotationAssertion(rdfs:label "upper leg bone") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (thoracic segment bone) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A bone that is part of a thorax [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37247") AnnotationAssertion( "MA:0000559") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bone of thorax") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bone organ of thorax") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "thorax bone") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "thorax bone organ") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "MA:0000559") "upper body bone") AnnotationAssertion( "UBERON:0003827") AnnotationAssertion(rdfs:label "thoracic segment bone") SubClassOf( ) SubClassOf( ) # Class: (abdominal segment bone) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A bone that is part of an abdominal segment of trunk [Automatically generated definition].") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37058") AnnotationAssertion( "MA:0000525") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "abdominal segment of trunk bone") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "abdominal segment of trunk bone organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bone of abdominal segment of trunk") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bone organ of abdominal segment of trunk") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003828") AnnotationAssertion(rdfs:label "abdominal segment bone") SubClassOf( ) SubClassOf( ) # Class: (urethra muscle tissue) AnnotationAssertion(Annotation( "UBERON:cjm"^^xsd:string) "Any muscle tissue that is part of the urethra.") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37787") AnnotationAssertion( "MA:0002649") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "MA:0002649") "urethral muscle layer") AnnotationAssertion( "UBERON:0003829") AnnotationAssertion(rdfs:label "urethra muscle tissue") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (thoracic segment muscle) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "Any muscle organ that is part of a thorax [Automatically generated definition].") AnnotationAssertion( "MA:0000561") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "muscle organ of thorax") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "thorax muscle organ") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "MA:0000561") "upper body muscle") AnnotationAssertion( "UBERON:0003830") AnnotationAssertion(rdfs:label "thoracic segment muscle") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "prolog"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (respiratory system muscle) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "Any muscle organ that is part of a respiratory system [Automatically generated definition].") AnnotationAssertion( "EMAPA:35733") AnnotationAssertion( "MA:0001828") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "apparatus respiratorius muscle organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "muscle organ of apparatus respiratorius") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "muscle organ of respiratory system") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "respiratory system muscle organ") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003831") AnnotationAssertion(rdfs:label "respiratory system muscle") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses( ) # Class: (esophagus muscle) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "Any muscle organ that is part of a esophagus [Automatically generated definition].") AnnotationAssertion( "merge muscle and muscle layer?") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:26983") AnnotationAssertion( "MA:0002682") AnnotationAssertion( "esophageal muscle") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "esophagus muscle organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "gullet muscle organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "muscle organ of esophagus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "muscle organ of gullet") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "muscle organ of oesophagus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "oesophagus muscle organ") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003832") AnnotationAssertion(rdfs:label "esophagus muscle") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "MA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (abdominal segment muscle) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A muscle organ that is part of an abdominal segment of trunk [Automatically generated definition].") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37060") AnnotationAssertion( "MA:0000527") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "abdominal segment of trunk muscle organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "muscle organ of abdominal segment of trunk") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003833") AnnotationAssertion(rdfs:label "abdominal segment muscle") SubClassOf( ) SubClassOf( ) # Class: (thoracic segment blood vessel) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A blood vessel that is part of a thorax [Automatically generated definition].") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37238") AnnotationAssertion( "MA:0000558") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "blood vessel of thorax") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "thorax blood vessel") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "MA:0000558") "upper body blood vessel") AnnotationAssertion( "UBERON:0003834") AnnotationAssertion(rdfs:label "thoracic segment blood vessel") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (abdominal segment blood vessel) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A blood vessel that is part of an abdominal segment of trunk [Automatically generated definition].") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37057") AnnotationAssertion( "MA:0000524") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "abdominal segment of trunk blood vessel") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "blood vessel of abdominal segment of trunk") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003835") AnnotationAssertion(rdfs:label "abdominal segment blood vessel") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (abdominal segment skin) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A skin of body that is part of an abdominal segment of trunk [Automatically generated definition].") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37063") AnnotationAssertion( "FMA:264898") AnnotationAssertion( "MA:0000530") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "abdominal segment of trunk skin") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "skin of abdominal segment of trunk") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003836") AnnotationAssertion(rdfs:label "abdominal segment skin") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (thoracic segment connective tissue) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A portion of connective tissue that is part of a thorax [Automatically generated definition].") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37253") AnnotationAssertion( "MA:0000560") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "connective tissue of thorax") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "portion of connective tissue of thorax") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "textus connectivus of thorax") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "thorax connective tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "thorax portion of connective tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "thorax textus connectivus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "MA:0000560") "upper body connective tissue") AnnotationAssertion( "UBERON:0003837") AnnotationAssertion(rdfs:label "thoracic segment connective tissue") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (abdominal segment connective tissue) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A portion of connective tissue that is part of an abdominal segment of trunk [Automatically generated definition].") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37059") AnnotationAssertion( "MA:0000526") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "abdominal segment of trunk connective tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "abdominal segment of trunk portion of connective tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "abdominal segment of trunk textus connectivus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "connective tissue of abdominal segment of trunk") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "portion of connective tissue of abdominal segment of trunk") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "textus connectivus of abdominal segment of trunk") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003838") AnnotationAssertion(rdfs:label "abdominal segment connective tissue") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (forelimb joint) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A limb joint that is part of a forelimb [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:19204") AnnotationAssertion( "MA:0000614") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "anteriormost limb joint of limb") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "anteriormost limb limb joint") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "fore limb joint of limb") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "fore limb limb joint") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "forelimb joint of limb") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "forelimb limb joint") AnnotationAssertion(Annotation( ) "joint of free upper limb") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "joint of limb of anteriormost limb") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "joint of limb of fore limb") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "joint of limb of forelimb") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "joint of limb of superior member") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "joint of limb of upper extremity") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "limb joint of anteriormost limb") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "limb joint of fore limb") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "limb joint of forelimb") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "limb joint of superior member") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "limb joint of upper extremity") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "superior member joint of limb") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "superior member limb joint") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "upper extremity joint of limb") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "upper extremity limb joint") AnnotationAssertion(Annotation( "NCBITaxon:8782"^^xsd:string) Annotation( "OBOL:automatic"^^xsd:string) Annotation( ) "wing joint") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003839") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "forelimb joint") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (hindlimb joint) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A limb joint that is part of a hindlimb [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:32635") AnnotationAssertion( "MA:0000662") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "hind limb joint of limb") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "hind limb limb joint") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "hindlimb joint of limb") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "hindlimb limb joint") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "inferior member joint of limb") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "inferior member limb joint") AnnotationAssertion(Annotation( ) "joint of free lower limb") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "joint of limb of hind limb") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "joint of limb of hindlimb") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "joint of limb of inferior member") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "joint of limb of lower extremity") AnnotationAssertion(Annotation( ) "joint of lower limb") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "limb joint of hind limb") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "limb joint of hindlimb") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "limb joint of inferior member") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "limb joint of lower extremity") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "lower extremity joint of limb") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "lower extremity limb joint") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003840") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "hindlimb joint") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (autopod joint) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A limb joint that is part of an autopod [Automatically generated definition].") AnnotationAssertion( "EMAPA:35160") AnnotationAssertion( "MA:0002715") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "autopod joint of limb") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "autopod limb joint") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "distal free limb segment joint of limb") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "distal free limb segment limb joint") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "joint of limb of autopod") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "joint of limb of distal free limb segment") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "limb joint of autopod") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "limb joint of distal free limb segment") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "MA:0002715") "paw joint") AnnotationAssertion( "UBERON:0003841") AnnotationAssertion(rdfs:label "autopod joint") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (neural tube lumen) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An anatomical space that surrounded_by a neural tube.") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001119") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0030223693 Liem KF, Bemis WE, Walker WF, Grande L, Functional Anatomy of the Vertebrates: An Evolutionary Perspective (2001) p.28"^^xsd:string) "(...) at some stage of its development, every chordate exhibits five uniquely derived characters or synapomorphies of the group: (...) (4) a single, tubular nerve cord that is located dorsal to the notochord (...).[well established][VHOG]") AnnotationAssertion( "UBERON:0005713") AnnotationAssertion( "AAO:0011073") AnnotationAssertion( "EHDAA2:0001269") AnnotationAssertion( "EHDAA:2889") AnnotationAssertion( "EHDAA:914") AnnotationAssertion( "EMAPA:16167") AnnotationAssertion( "VHOG:0001119") AnnotationAssertion( "XAO:0000252") AnnotationAssertion(Annotation( ) "cavity of neural tube") AnnotationAssertion(Annotation( ) "lumen of neural tube") AnnotationAssertion(Annotation( "EHDAA2:0001269") "neural tube neural lumen") AnnotationAssertion( "prosencoel") AnnotationAssertion( "uberon") AnnotationAssertion( "central lumen") AnnotationAssertion(Annotation( "EHDAA:2889") "neural lumen") AnnotationAssertion(Annotation( "VHOG:0001119") "neurocoel") AnnotationAssertion( "UBERON:0003842") AnnotationAssertion(rdfs:label "neural tube lumen") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (dental epithelium) AnnotationAssertion(Annotation( ) Annotation( "ZFA:0005134") "Epithelium that is part of a developing tooth or dental organ.") AnnotationAssertion( "see comments for dental organ.") AnnotationAssertion( "todo - full developmental relationships") AnnotationAssertion(Annotation( ) "In the developing molar dentition of the mouse, tooth inductive po- tential resides in the dental epithelium until embryonic day (E)12.5 (3). Thereafter, tooth inductive potential shifts to neural crest-derived dental mesenchyme, which acquires the ability to direct tooth formation in nonodontogenic tissues (3, 4)") AnnotationAssertion( ) AnnotationAssertion( "AAO:0011027") AnnotationAssertion( "BTO:0001723") AnnotationAssertion( "EMAPA:32903") AnnotationAssertion( "MA:0003151") AnnotationAssertion( "NCIT:C54296") AnnotationAssertion( "TAO:0005134") AnnotationAssertion(Annotation( "ncithesaurus:Odontogenic_Epithelial_Remnants") "UMLS:C1709309") AnnotationAssertion( "VHOG:0001443") AnnotationAssertion( "XAO:0003203") AnnotationAssertion( "ZFA:0005134") AnnotationAssertion(Annotation( "ZFA:0005134") Annotation( ) "dental epithelia") AnnotationAssertion(Annotation( "ZFA:0005134") "dental epithelium") AnnotationAssertion( "odontogenic epithelium") AnnotationAssertion( "tooth epithelium") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0001723") "reduced enamel epithelium") AnnotationAssertion( "UBERON:0003843") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "dental epithelium") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "epithelium") Annotation( "JB") ObjectSomeValuesFrom( )) # Class: (upper eyelid epithelium) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An epithelium that is part of an upper eyelid [Automatically generated definition].") AnnotationAssertion( "EHDAA2:0002116") AnnotationAssertion( "EMAPA:17835") AnnotationAssertion( "VHOG:0000638") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelial tissue of superior eyelid") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelial tissue of upper eyelid") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelium of superior eyelid") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelium of upper eyelid") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "superior eyelid epithelial tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "superior eyelid epithelium") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "upper eyelid epithelial tissue") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003844") AnnotationAssertion(rdfs:label "upper eyelid epithelium") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lower eyelid epithelium) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An epithelium that is part of a lower eyelid [Automatically generated definition].") AnnotationAssertion( "EHDAA2:0001016") AnnotationAssertion( "EMAPA:17832") AnnotationAssertion( "VHOG:0000637") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelial tissue of inferior eyelid") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelial tissue of lower eyelid") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelium of inferior eyelid") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelium of lower eyelid") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "inferior eyelid epithelial tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "inferior eyelid epithelium") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "lower eyelid epithelial tissue") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003845") AnnotationAssertion(rdfs:label "lower eyelid epithelium") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (thymus epithelium) AnnotationAssertion(Annotation( "MP:0009544") "An epithelium that is part of a thymus, forming a supporting framework[MP,modified].") AnnotationAssertion( ) AnnotationAssertion( "BTO:0001836") AnnotationAssertion( "CALOHA:TS-1040") AnnotationAssertion( "EHDAA2:0002019") AnnotationAssertion( "EMAPA:35864") AnnotationAssertion( "MA:0000768") AnnotationAssertion( "NCIT:C45713") AnnotationAssertion(Annotation( "ncithesaurus:Thymic_Epithelial_Tissue") "UMLS:C1711423") AnnotationAssertion( "VHOG:0001426") AnnotationAssertion( "ZFA:0005779") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelial tissue of thymus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelial tissue of thymus gland") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelium of thymus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelium of thymus gland") AnnotationAssertion( "thymic epithelial tissue") AnnotationAssertion(Annotation( "BTO:0001836") "thymic epithelium") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "thymus epithelial tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "thymus gland epithelial tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "thymus gland epithelium") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003846") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "thymus epithelium") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (thyroid artery) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An artery that supplies a thyroid gland.") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0010490") Annotation( "AAO"^^xsd:string) Annotation( "AAO:BJB"^^xsd:string) "Part of the external carotid which supplies blood to the thyroid gland.[AAO]") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0010490") Annotation( "AAO"^^xsd:string) "relationship loss: part_of external carotid (AAO:0010218)[AAO]") AnnotationAssertion( ) AnnotationAssertion( "AAO:0010490") AnnotationAssertion( "EHDAA2:0002029") AnnotationAssertion( "EHDAA:7372") AnnotationAssertion( "EMAPA:18622") AnnotationAssertion( "MA:0002066") AnnotationAssertion( "NCIT:C53020") AnnotationAssertion(Annotation( "ncithesaurus:Thyroid_Artery") "UMLS:C1711424") AnnotationAssertion( "VHOG:0001366") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003847") AnnotationAssertion(rdfs:label "thyroid artery") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (gonadal vein) AnnotationAssertion(Annotation( ) "In medicine, gonadal vein refers to the blood vessel that carrying blood away from the gonad (testis, ovary) toward the heart. Females : ovarian vein Males : testicular vein [WP,unvetted].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0000719") AnnotationAssertion( "EHDAA:8703") AnnotationAssertion( "OpenCyc:Mx4rvlWYh5wpEbGdrcN5Y29ycA") AnnotationAssertion( "VHOG:0001340") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "gonad vein") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "gonada vein") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "vein of gonad") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "vein of gonada") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003848") AnnotationAssertion(rdfs:label "gonadal vein") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/d/da/Gray1120.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (mesencephalic neural crest) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A neural crest that has_potential_to_developmentally_contribute_to a midbrain.") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000796") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0030223693 Liem KF, Bemis WE, Walker WF, Grande L, Functional Anatomy of the Vertebrates: An Evolutionary Perspective (2001) p.43") "We conclude this section by listing some of the many synapomorphies of craniates, including (1) the neural crest (...).[well established][VHOG]") AnnotationAssertion( "EFO:0003591") AnnotationAssertion( "EHDAA2:0001101") AnnotationAssertion( "EHDAA:360") AnnotationAssertion( "TAO:0000935") AnnotationAssertion( "VHOG:0000796") AnnotationAssertion( "ZFA:0000935") AnnotationAssertion(Annotation( "ZFA:0000935") "mesencephalic neural crest") AnnotationAssertion(Annotation( "ZFA:0000935") "neural crest midbrain") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003849") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "mesencephalic neural crest") SubClassOf( ) SubClassOf(Annotation( "ZFA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (telencephalon neural crest) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A neural crest that has_potential_to_developmentally_contribute_to a telencephalon.") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0000812") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "Cranial neural crest that is part of the telencephalon.[TAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000799") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0030223693 Liem KF, Bemis WE, Walker WF, Grande L, Functional Anatomy of the Vertebrates: An Evolutionary Perspective (2001) p.43") "We conclude this section by listing some of the many synapomorphies of craniates, including (1) the neural crest (...).[well established][VHOG]") AnnotationAssertion( "EFO:0003574") AnnotationAssertion( "RETIRED_EHDAA2:0001991") AnnotationAssertion( "TAO:0000812") AnnotationAssertion( "VHOG:0000799") AnnotationAssertion( "ZFA:0000812") AnnotationAssertion(Annotation( "ZFA:0000812") "neural crest telencephalon") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003850") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "telencephalon neural crest") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (diencephalon neural crest) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A neural crest that has_potential_to_developmentally_contribute_to a diencephalon.") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000798") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0030223693 Liem KF, Bemis WE, Walker WF, Grande L, Functional Anatomy of the Vertebrates: An Evolutionary Perspective (2001) p.43") "We conclude this section by listing some of the many synapomorphies of craniates, including (1) the neural crest (...).[well established][VHOG]") AnnotationAssertion( "EFO:0003573") AnnotationAssertion( "EHDAA2:0000603") AnnotationAssertion( "EMAPA:16518") AnnotationAssertion( "TAO:0000811") AnnotationAssertion( "VHOG:0000798") AnnotationAssertion( "ZFA:0000811") AnnotationAssertion(Annotation( "ZFA:0000811") "diencephalic neural crest") AnnotationAssertion(Annotation( "EHDAA2:0000603") "future diencephalon neural crest") AnnotationAssertion(Annotation( "ZFA:0000811") "neural crest diencephalon") AnnotationAssertion(Annotation( "EMAPA:16518") "neural crest of future diencephalon") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003851") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "diencephalon neural crest") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (rhombencephalon neural crest) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A neural crest that has_potential_to_developmentally_contribute_to a hindbrain.") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0007063") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "Cranial neural crest that is part of the hindbrain.[TAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001210") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0030223693 Liem KF, Bemis WE, Walker WF, Grande L, Functional Anatomy of the Vertebrates: An Evolutionary Perspective (2001) p.43") "We conclude this section by listing some of the many synapomorphies of craniates, including (1) the neural crest (...).[well established][VHOG]") AnnotationAssertion( "EHDAA2:0001628") AnnotationAssertion( "EHDAA:362") AnnotationAssertion( "EMAPA:35747") AnnotationAssertion( "TAO:0007063") AnnotationAssertion( "VHOG:0001210") AnnotationAssertion( "ZFA:0007063") AnnotationAssertion(Annotation( "ZFA:0007063") "neural crest hindbrain") AnnotationAssertion(Annotation( "ZFA:0007063") "rhombencephalic neural crest") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "EMAPA:35747") "rhombomere neural crest") AnnotationAssertion( "UBERON:0003852") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "rhombencephalon neural crest") SubClassOf( ) SubClassOf(Annotation( "ZFA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (spinal cord neural crest) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A neural crest that has_potential_to_developmentally_contribute_to a spinal cord.") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001006") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0030223693 Liem KF, Bemis WE, Walker WF, Grande L, Functional Anatomy of the Vertebrates: An Evolutionary Perspective (2001) p.43") "We conclude this section by listing some of the many synapomorphies of craniates, including (1) the neural crest (...)[well established][VHOG]") AnnotationAssertion( "EHDAA:696") AnnotationAssertion( "EMAPA:16163") AnnotationAssertion( "EMAPA:16881") AnnotationAssertion( "VHOG:0001006") AnnotationAssertion(Annotation( "VHOG:0001006") "neural crest spinal cord") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "VHOG:0001006") "spinal neural crest") AnnotationAssertion( "UBERON:0003853") AnnotationAssertion(rdfs:label "spinal cord neural crest") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (spinal cord neural plate) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A neural plate that develops_from a future spinal cord.") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000439") Annotation( "VHOG"^^xsd:string) Annotation( ) "Neural plate that is part of the spinal cord. [Bgee_curator][VHOG]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000439") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0030223693 Liem KF, Bemis WE, Walker WF, Grande L, Functional Anatomy of the Vertebrates: An Evolutionary Perspective (2001) p.28"^^xsd:string) "(...) at some stage of its development, every chordate exhibits five uniquely derived characters or synapomorphies of the group: (...) (4) a single, tubular nerve cord that is located dorsal to the notochord (...)[well established][VHOG]") AnnotationAssertion( "FMA:312957") AnnotationAssertion( "TAO:0007021") AnnotationAssertion( "VHOG:0000439") AnnotationAssertion( "ZFA:0007021") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "neural plate of spinal cord") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003854") AnnotationAssertion(rdfs:label "spinal cord neural plate") SubClassOf( ) SubClassOf(Annotation( "ZFA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (gonad mesenchyme) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "Mesenchyme that is part of a developing gonad [Automatically generated definition].") AnnotationAssertion( "EHDAA:5012") AnnotationAssertion( "EMAPA:16858") AnnotationAssertion( "EMAPA:17385") AnnotationAssertion( "VHOG:0001090") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "gonada mesenchyme") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mesenchyme of gonad") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mesenchyme of gonada") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003855") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "gonad mesenchyme") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (uncondensed odontogenic mesenchyme) AnnotationAssertion(Annotation( ) Annotation( ) "Mesenchyme enclosed by a dental organ that gives rise to an odontogenic papilla.") AnnotationAssertion( "we follow ZFA in introducing an additional distinction between the dental papilla and the (uncondensed) mesenchyme. Note that in some species such as zebrafish teeth are not part of the mouth, and sharks have dermal denticles which share similar developmental origins with teeth. For now we assume a NC origin for all and add a taxon restriction to 1st arch mesenchyme") AnnotationAssertion(Annotation( "MP") Annotation( "J:153554") "Mesenchyme enclosed by dental organ.[MP]") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0005139") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "Mesenchyme enclosed by dental organ.[TAO]") AnnotationAssertion( "EMAPA:32891") AnnotationAssertion( "MA:0003152") AnnotationAssertion( "TAO:0005139") AnnotationAssertion( "VHOG_RETIRED:0001444") AnnotationAssertion( "ZFA:0005139") AnnotationAssertion(Annotation( "ZFA:0005139") "dental mesenchyme") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "dental organ mesenchyme") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "enamel organ mesenchyme") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "tooth enamel organ mesenchyme") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "tooth mesenchyme") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003856") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "uncondensed odontogenic mesenchyme") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "see comments") ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (upper eyelid mesenchyme) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "Mesenchyme that is part of a developing upper eyelid [Automatically generated definition].") AnnotationAssertion( "EHDAA2:0002117") AnnotationAssertion( "EHDAA:9051") AnnotationAssertion( "EMAPA:17836") AnnotationAssertion( "VHOG:0001093") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mesenchyme of superior eyelid") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mesenchyme of upper eyelid") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "superior eyelid mesenchyme") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003857") AnnotationAssertion(rdfs:label "upper eyelid mesenchyme") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "cjm"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (lower eyelid mesenchyme) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "Mesenchyme that is part of a developing lower eyelid [Automatically generated definition].") AnnotationAssertion( "EHDAA2:0001017") AnnotationAssertion( "EHDAA:9045") AnnotationAssertion( "EMAPA:17833") AnnotationAssertion( "VHOG:0001036") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "inferior eyelid mesenchyme") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mesenchyme of inferior eyelid") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mesenchyme of lower eyelid") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003858") AnnotationAssertion(rdfs:label "lower eyelid mesenchyme") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (forelimb mesenchyme) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "Mesenchyme that is part of a developing forelimb [Automatically generated definition].") AnnotationAssertion( "EMAPA:32628") AnnotationAssertion( "VHOG:0001109") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "anteriormost limb mesenchyme") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "fore limb mesenchyme") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mesenchyme of anteriormost limb") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mesenchyme of fore limb") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mesenchyme of forelimb") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mesenchyme of superior member") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mesenchyme of upper extremity") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "superior member mesenchyme") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "upper extremity mesenchyme") AnnotationAssertion(Annotation( "Geisha:syn") Annotation( "NCBITaxon:8782"^^xsd:string) Annotation( ) "wing mesenchyme") AnnotationAssertion(Annotation( "NCBITaxon:8782"^^xsd:string) Annotation( "OBOL:automatic"^^xsd:string) Annotation( ) "wing mesenchyme") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003859") AnnotationAssertion(rdfs:label "forelimb mesenchyme") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (hindlimb mesenchyme) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "Mesenchyme that is part of a developing hindlimb [Automatically generated definition].") AnnotationAssertion( "EMAPA:32637") AnnotationAssertion( "VHOG:0001074") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "hind limb mesenchyme") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "inferior member mesenchyme") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "lower extremity mesenchyme") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mesenchyme of hind limb") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mesenchyme of hindlimb") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mesenchyme of inferior member") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mesenchyme of lower extremity") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003860") AnnotationAssertion(rdfs:label "hindlimb mesenchyme") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (neural arch) AnnotationAssertion(Annotation( ) "Posterior part of a vertebra that consists of a pair of pedicles and a pair of laminae, and supports seven processes: four articular processes, two transverse processes one spinous process[WP]. ZFA: A neural arch encloses the neural canal and typically meets its partner to form a neural spine.") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0001066") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "A neural arch encloses the neural canal and typically meets its partner to form a neural spine. The neural arch can be a replacement ossification of the basidorsal cartilage or can form directly in membrane bone.[TAO]") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0000725") Annotation( "AAO"^^xsd:string) Annotation( "AAO:Pugener_2002") "Bony arch perched on the vertebral centrum; successive arches enclose the neural canal that surrounds and protects the spinal cord dorsally.[AAO]") AnnotationAssertion(Annotation( "MP:0004599:csmith") "the dorsal bony and/or cartilaginous part of a vertebra, consisting of a pair of pedicles, a pair of laminae, and seven processes (four articular processes, two transverse processes, and one spinous process)") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0001066") Annotation( "TAO"^^xsd:string) "relationship loss: develops_from basidorsal (TAO:0001060)[TAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001670") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0030223693 Liem KF, Bemis WE, Walker WF, Grande L, Functional Anatomy of the Vertebrates: An Evolutionary Perspective (2001) p.270") "(...) certain common components [of vertebral structure] are found in nearly all vertebrate. A representative vertebra has a vertebral arch or neural arch, which extends dorsally around the spinal cord.[well established][VHOG]") AnnotationAssertion( "tiny neural arches present in Hagfish (which lack a true vertebraal column).") AnnotationAssertion( "The neural arch can be a replacement ossification of the basidorsal cartilage or can form directly in membrane bone") AnnotationAssertion(Annotation( "MA:0001453") Annotation( ) "vertebra neural arch") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0000725") AnnotationAssertion( "EFO:0003618") AnnotationAssertion( "FMA:11946") AnnotationAssertion( "MA:0001453") AnnotationAssertion( "NCIT:C32138") AnnotationAssertion( "OpenCyc:Mx4rwKYHvZwpEbGdrcN5Y29ycA") AnnotationAssertion( "TAO:0001066") AnnotationAssertion(Annotation( "ncithesaurus:Arch_of_the_Vertebra") "UMLS:C0223076") AnnotationAssertion( "VHOG:0001670") AnnotationAssertion( "ZFA:0001066") AnnotationAssertion(Annotation( ) "arcus vertebra") AnnotationAssertion(Annotation( ) Annotation( ) "arcus vertebrae") AnnotationAssertion(Annotation( "FMA:11946") "arcus vertebrae (vertebralis)") AnnotationAssertion(Annotation( "ZFA:0001066") "dorsal arcocentrum") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "arcus vertebrae") AnnotationAssertion(Annotation( "MA:0001453") "vertebra dorsal arch") AnnotationAssertion( "UBERON:0003861") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "neural arch") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/3/30/Gray82.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pedal digit 4 phalanx) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A phalanx that is part of a foot digit 4 [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:19130") AnnotationAssertion( "FMA:32901") AnnotationAssertion( "MA:0001384") AnnotationAssertion( "NCIT:C52781") AnnotationAssertion(Annotation( "ncithesaurus:Foot_Digit_4_Phalanx") "UMLS:C1708086") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "digit long bone of foot digit 4") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "foot digit 4 digit long bone") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "foot digit 4 long bone of digit") AnnotationAssertion(Annotation( "MA:0001384") "foot digit 4 phalanx") AnnotationAssertion(Annotation( "FMA:32901") "fourth toe phalanx") AnnotationAssertion(Annotation( "OBOL:accepted"^^xsd:string) "hind limb digit 4 phalanx") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "long bone of digit of foot digit 4") AnnotationAssertion(Annotation( ) Annotation( ) "pedal digit IV phalanx") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "phalanx of foot digit 4") AnnotationAssertion(Annotation( "FMA:32901") "phalanx of fourth toe") AnnotationAssertion(Annotation( "NCBITaxon:9606"^^xsd:string) Annotation( "OBOL:accepted"^^xsd:string) Annotation( ) "foot digit 4 phalanx") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003862") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "pedal digit 4 phalanx") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pedal digit 5 phalanx) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A phalanx that is part of a foot digit 5 [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:19132") AnnotationAssertion( "FMA:32902") AnnotationAssertion( "MA:0001385") AnnotationAssertion( "NCIT:C52782") AnnotationAssertion(Annotation( "ncithesaurus:Foot_Digit_5_Phalanx") "UMLS:C1708088") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "digit long bone of foot digit 5") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "foot digit 5 digit long bone") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "foot digit 5 long bone of digit") AnnotationAssertion(Annotation( "MA:0001385") "foot digit 5 phalanx") AnnotationAssertion(Annotation( "OBOL:accepted"^^xsd:string) "hind limb digit 5 phalanx") AnnotationAssertion(Annotation( "FMA:32902") "little toe phalanx") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "long bone of digit of foot digit 5") AnnotationAssertion(Annotation( ) Annotation( ) "pedal digit V phalanx") AnnotationAssertion(Annotation( "FMA:32902") "phalanx of fifth digit of foot") AnnotationAssertion(Annotation( "FMA:32902") "phalanx of fifth toe") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "phalanx of foot digit 5") AnnotationAssertion(Annotation( "FMA:32902") "phalanx of little toe") AnnotationAssertion(Annotation( "NCBITaxon:9606"^^xsd:string) Annotation( "OBOL:accepted"^^xsd:string) Annotation( ) "foot digit 5 phalanx") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003863") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "pedal digit 5 phalanx") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (middle phalanx of manus) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A middle phalanx that is part of a finger [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37306") AnnotationAssertion( "FMA:75817") AnnotationAssertion( "MA:0001394") AnnotationAssertion( "NCIT:C12863") AnnotationAssertion(Annotation( "ncithesaurus:Middle_Phalanx_of_the_Hand") "UMLS:C0223828") AnnotationAssertion(Annotation( "MA:0001394") "hand middle phalanx") AnnotationAssertion( "middle manual phalanx") AnnotationAssertion(Annotation( "FMA:75817") "middle phalanx of finger") AnnotationAssertion(Annotation( "MA:0001394") "middle phalanx of hand") AnnotationAssertion( "middle phalanx of manual digit") AnnotationAssertion(Annotation( "FMA:75817") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "phalanx media manus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003864") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "middle phalanx of manus") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (distal phalanx of manus) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A distal phalanx that is part of a finger [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:35393") AnnotationAssertion( "FMA:75818") AnnotationAssertion( "MA:0001388") AnnotationAssertion( "NCIT:C52784") AnnotationAssertion(Annotation( "ncithesaurus:Distal_Phalanx_of_Hand") "UMLS:C1269782") AnnotationAssertion( "distal manual phalanx") AnnotationAssertion(Annotation( "FMA:75818") "distal phalanx of finger") AnnotationAssertion( "distal phalanx of hand") AnnotationAssertion( "distal phalanx of manual digit") AnnotationAssertion(Annotation( "MA:0001388") "hand distal phalanx") AnnotationAssertion(Annotation( "FMA:75818") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "phalanx distalis manus") AnnotationAssertion(Annotation( ) "terminal phalanx of hand") AnnotationAssertion(Annotation( ) "ungual phalanx of hand") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003865") AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "This is typically proximally connected to the middle phalanx of manus, except in some cases such as the manual digit 1 (thumb) of many mammals such as humans, where it connects to the proximal phalanx. It always connects to some phalanx, by definition") AnnotationAssertion(rdfs:label "distal phalanx of manus") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (middle phalanx of pes) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A middle phalanx that is part of a toe [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37311") AnnotationAssertion( "FMA:75829") AnnotationAssertion( "MA:0001386") AnnotationAssertion(Annotation( "MA:0001386") "foot middle phalanx") AnnotationAssertion( "middle pedal phalanx") AnnotationAssertion( "middle phalanx of foot") AnnotationAssertion(Annotation( "FMA:75829") "middle phalanx of toe") AnnotationAssertion(Annotation( "FMA:75829") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "phalanx media pedis") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003866") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "middle phalanx of pes") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (distal phalanx of pes) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A distal phalanx that is part of a pedal digit [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37310") AnnotationAssertion( "FMA:75830") AnnotationAssertion( "MA:0001380") AnnotationAssertion( "NCIT:C52783") AnnotationAssertion(Annotation( "ncithesaurus:Distal_Phalanx_of_Foot") "UMLS:C0224026") AnnotationAssertion( "distal pedal phalanx") AnnotationAssertion( "distal phalanx of foot") AnnotationAssertion(Annotation( "FMA:75830") "distal phalanx of toe") AnnotationAssertion(Annotation( "MA:0001380") "foot distal phalanx") AnnotationAssertion(Annotation( "FMA:75830") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "phalanx distalis pedis") AnnotationAssertion(Annotation( ) "terminal phalanx of foot") AnnotationAssertion(Annotation( ) "terminal phalanx of hindlimb") AnnotationAssertion(Annotation( ) "ungual phalanx of foot") AnnotationAssertion(Annotation( ) "ungual phalanx of hindlimb") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003867") AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "This is typically proximally connected to the middle phalanx of pes, except in some cases such as the pedal digit 1 (big toe) in many mammals such as humans, where it connects to the proximal phalanx. It always connects to some phalanx, by definition") AnnotationAssertion(rdfs:label "distal phalanx of pes") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (proximal phalanx of pes) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A proximal phalanx that is part of a pedal digit [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37312") AnnotationAssertion( "FMA:75828") AnnotationAssertion( "MA:0001387") AnnotationAssertion( "NCIT:C52785") AnnotationAssertion(Annotation( "ncithesaurus:Proximal_Phalanx_of_Foot") "UMLS:C0224020") AnnotationAssertion(Annotation( "MA:0001387") "foot proximal phalanx") AnnotationAssertion(Annotation( "FMA:75828") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "phalanx proximalis pedis") AnnotationAssertion( "proximal pedal phalanx") AnnotationAssertion( "proximal phalanx of foot") AnnotationAssertion( "proximal phalanx of foot digit") AnnotationAssertion( "proximal phalanx of hind digit") AnnotationAssertion( "proximal phalanx of pes") AnnotationAssertion(Annotation( "FMA:75828") "proximal phalanx of toe") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003868") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "proximal phalanx of pes") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (presumptive ganglion) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A presumptive structure that has the potential to develop into a ganglion.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003869") AnnotationAssertion(rdfs:label "presumptive ganglion") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete presumptive ventricle) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003874") AnnotationAssertion(rdfs:label "obsolete presumptive ventricle") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (hippocampal field) AnnotationAssertion(Annotation( "MGI:csmith"^^xsd:string) Annotation( "MP:0008262") "A part or parts of the hippocampus that have a particular function.") AnnotationAssertion(Annotation( "ABA") "do not include ABA:HIP") AnnotationAssertion( "BAMS:HIP") AnnotationAssertion( "BAMS:Hi/CA") AnnotationAssertion( "EMAPA:32772") AnnotationAssertion( "FMA:74041") AnnotationAssertion( "MA:0002428") AnnotationAssertion(Annotation( "FMA:74041") "hippocampus subdivision") AnnotationAssertion(Annotation( "FMA:74041") "subdivision of hippocampus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BAMS:HIP") "hippocampal region") AnnotationAssertion(Annotation( "MA:0002428") "hippocampus region") AnnotationAssertion( "UBERON:0003876") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "hippocampal field") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses( ) # Class: (CA1 field of hippocampus) AnnotationAssertion(Annotation( "BIRNLEX:1197") "Part of hippocampus proper bounded by CA2 and the subiculum, characterized by pyramidal neurons that receive projections from pyramidal neurons of CA3 via the Schaffer collaterals.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:CA1") AnnotationAssertion( "BIRNLEX:1197") AnnotationAssertion( "DHBA:10297") AnnotationAssertion( "DMBA:16131") AnnotationAssertion( "EFO:0002454") AnnotationAssertion( "EMAPA:32768") AnnotationAssertion( "FMA:74042") AnnotationAssertion( "HBA:12892") AnnotationAssertion( "MA:0000950") AnnotationAssertion( "MBA:382") AnnotationAssertion( "NCIT:C32246") AnnotationAssertion( "PBA:10058") AnnotationAssertion(Annotation( "BIRNLEX:1197") "UMLS:C0694598") AnnotationAssertion(Annotation( "ncithesaurus:CA1_Field_of_the_Cornu_Ammonis") "UMLS:C0694598") AnnotationAssertion(Annotation( "BIRNLEX:1197") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=183") AnnotationAssertion( "CA1") AnnotationAssertion( "CA1 field") AnnotationAssertion( "CA1 field of Ammon's horn") AnnotationAssertion( "CA1 field of cornu ammonis") AnnotationAssertion( "CA1 field of hippocampus") AnnotationAssertion(Annotation( "BIRNLEX:1197") "cornu ammonis 1") AnnotationAssertion( "hippocampus CA1") AnnotationAssertion(Annotation( "BIRNLEX:1197") "prosubiculum = distal ca1") AnnotationAssertion(Annotation( "FMA:74042") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "regio i cornus ammonis") AnnotationAssertion(Annotation( "FMA:74042") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "regio i hippocampi proprii") AnnotationAssertion(Annotation( "BIRNLEX:1197") "regio superior") AnnotationAssertion(Annotation( "FMA:74042") "regio superior of the hippocampus") AnnotationAssertion( "region 1 of Ammon's horn") AnnotationAssertion(Annotation( "FMA:74042") "region i of ammon's horn") AnnotationAssertion(Annotation( "FMA:74042") "region i of hippocampus proper") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BAMS:CA1") "CA1 field of the Ammon horn") AnnotationAssertion(Annotation( "NeuroNames:183") Annotation( ) "CA1 field of the hippocampus") AnnotationAssertion(Annotation( "NeuroNames:183") "field CA1") AnnotationAssertion(Annotation( "NeuroNames:183") "field CA1 of hippocampus") AnnotationAssertion(Annotation( "NeuroNames:183") "field CA1, Ammon's horn (Lorente de Ns)") AnnotationAssertion(Annotation( "NeuroNames:183") "region CA1") AnnotationAssertion( "UBERON:0003881") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "CA1 field of hippocampus") SubClassOf( ) # Class: (CA2 field of hippocampus) AnnotationAssertion(Annotation( "BIRNLEX:1362") "Part of hippocampus proper bounded by areas CA3 and CA1, characterized by a narrow layer of large pyramidal cells, similar in size to CA3 pyramidal cells, but which lack the mossy fiber input from the dentate gyrus (adapted from Paxinos, G. The rat central nervous system, 2nd ed, Academic Press, San Diego, 1995, pg. 460).") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:CA2") AnnotationAssertion( "BIRNLEX:1362") AnnotationAssertion( "DHBA:10298") AnnotationAssertion( "DMBA:16136") AnnotationAssertion( "EFO:0002455") AnnotationAssertion( "EMAPA:32769") AnnotationAssertion( "FMA:74044") AnnotationAssertion( "HBA:12893") AnnotationAssertion( "MA:0000951") AnnotationAssertion( "MBA:423") AnnotationAssertion( "NCIT:C32247") AnnotationAssertion( "PBA:10063") AnnotationAssertion(Annotation( "BIRNLEX:1362") "UMLS:C0694599") AnnotationAssertion(Annotation( "ncithesaurus:CA2_Field_of_the_Cornu_Ammonis") "UMLS:C0694599") AnnotationAssertion(Annotation( "BIRNLEX:1362") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=184") AnnotationAssertion( "CA2") AnnotationAssertion( "CA2 field") AnnotationAssertion( "CA2 field of Ammon's horn") AnnotationAssertion( "CA2 field of cornu ammonis") AnnotationAssertion( "CA2 field of hippocampus") AnnotationAssertion( "hippocampus CA2") AnnotationAssertion(Annotation( "FMA:74044") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "regio ii cornus ammonis") AnnotationAssertion(Annotation( "FMA:74044") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "regio ii hippocampi proprii") AnnotationAssertion( "region 2 of Ammon's horn") AnnotationAssertion(Annotation( "FMA:74044") "region II of ammon's horn") AnnotationAssertion(Annotation( "FMA:74044") "region II of hippocampus proper") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BAMS:CA2") "CA2 field of the Ammon horn") AnnotationAssertion(Annotation( "NeuroNames:184") "CA2 field of the hippocampus") AnnotationAssertion(Annotation( "NeuroNames:184") Annotation( ) "cornu Ammonis 2") AnnotationAssertion(Annotation( "NeuroNames:184") "field CA2") AnnotationAssertion(Annotation( "NeuroNames:184") "field CA2 of hippocampus") AnnotationAssertion(Annotation( "NeuroNames:184") "field CA2, Ammon's horn (Lorente de Ns)") AnnotationAssertion(Annotation( "NeuroNames:184") "region CA2") AnnotationAssertion( "UBERON:0003882") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "CA2 field of hippocampus") SubClassOf( ) # Class: (CA3 field of hippocampus) AnnotationAssertion(Annotation( ) "Part of hippocampus proper bounded by the hilus of the dentate gyrus and area CA2, characterized by large pyramidal cells and a dense projection from dentate gyrus granule cell mossy fibers.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:CA3") AnnotationAssertion( "BIRNLEX:1204") AnnotationAssertion( "DHBA:10299") AnnotationAssertion( "DMBA:16141") AnnotationAssertion( "EFO:0002456") AnnotationAssertion( "EMAPA:32770") AnnotationAssertion( "FMA:74045") AnnotationAssertion( "HBA:12894") AnnotationAssertion( "MA:0000952") AnnotationAssertion( "MBA:463") AnnotationAssertion( "NCIT:C32248") AnnotationAssertion( "PBA:10068") AnnotationAssertion(Annotation( "BIRNLEX:1204") "UMLS:C0694600") AnnotationAssertion(Annotation( "ncithesaurus:CA3_Field_of_the_Cornu_Ammonis") "UMLS:C0694600") AnnotationAssertion(Annotation( "BIRNLEX:1204") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=185") AnnotationAssertion( "CA3") AnnotationAssertion( "CA3 field") AnnotationAssertion( "CA3 field of Ammon's horn") AnnotationAssertion( "CA3 field of cornu ammonis") AnnotationAssertion( "CA3 field of hippocampus") AnnotationAssertion( "hippocampus CA3") AnnotationAssertion(Annotation( "FMA:74045") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "regio III cornus ammonis") AnnotationAssertion(Annotation( "FMA:74045") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "regio III hippocampi proprii") AnnotationAssertion(Annotation( "BIRNLEX:1204") "regio inferior") AnnotationAssertion( "region 3 of Ammon's horn") AnnotationAssertion(Annotation( "FMA:74045") "region III of ammon's horn") AnnotationAssertion(Annotation( "FMA:74045") "region III of hippocampus proper") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "CA3") AnnotationAssertion(Annotation( "BAMS:CA3") "CA3 field of the Ammon horn") AnnotationAssertion(Annotation( "NeuroNames:185") "CA3 field of the hippocampus") AnnotationAssertion(Annotation( "NeuroNames:185") Annotation( ) "cornu Ammonis 3") AnnotationAssertion(Annotation( "NeuroNames:185") "field CA3") AnnotationAssertion(Annotation( "NeuroNames:185") "field CA3 of hippocampus") AnnotationAssertion(Annotation( "NeuroNames:185") "field CA3, Ammon's horn (Lorente de Ns)") AnnotationAssertion(Annotation( ) Annotation( ) "regio III cornus ammonis") AnnotationAssertion(Annotation( ) Annotation( ) "regio hippocampi proprii III") AnnotationAssertion(Annotation( "NeuroNames:185") "region CA3") AnnotationAssertion( "UBERON:0003883") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "CA3 field of hippocampus") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/a/ab/HippocampalRegions.jpg"^^xsd:anyURI) SubClassOf( ) # Class: (CA4 field of hippocampus) AnnotationAssertion(Annotation( "ncithesaurus:CA4_Field_of_the_Cornu_Ammonis") "The last of four regions in the cornu ammonis of the hippocampus and is also part of the hilus of the dentate gyrus. This area contains mostly mossy cells that receive inputs from the dentate gyrus and pyramidal cells in the CA3 region and also projects back to the dentate gyrus.") AnnotationAssertion( "consider obsoleting. consider - CA3c, hilus") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "DHBA:10300") AnnotationAssertion( "EFO:0002457") AnnotationAssertion( "EMAPA:32771") AnnotationAssertion( "FMA:75741") AnnotationAssertion( "HBA:12895") AnnotationAssertion( "MA:0000953") AnnotationAssertion( "NCIT:C32249") AnnotationAssertion( "PBA:10074") AnnotationAssertion(Annotation( "ncithesaurus:CA4_Field_of_the_Cornu_Ammonis") "UMLS:C2328406") AnnotationAssertion( "CA4") AnnotationAssertion( "CA4 field") AnnotationAssertion( "CA4 field of Ammon's horn") AnnotationAssertion( "CA4 field of cornu ammonis") AnnotationAssertion( "hippocampus CA4") AnnotationAssertion(Annotation( "FMA:75741") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "regio IV cornus ammonis") AnnotationAssertion(Annotation( "FMA:75741") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "regio IV hippocampi proprii") AnnotationAssertion( "region 4 of Ammon's horn") AnnotationAssertion(Annotation( "FMA:75741") "region IV of ammon's horn") AnnotationAssertion(Annotation( "FMA:75741") "region IV of hippocampus proper") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003884") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "CA4 field of hippocampus") SubClassOf( ) # Class: (mesometrium) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A mesentery that is part of a uterus [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:35562") AnnotationAssertion( "FMA:19816") AnnotationAssertion( "MA:0002931") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( "FMA:19816") Annotation( "MA:0002931") "mesentery of uterus") AnnotationAssertion( "UBERON:0003885") AnnotationAssertion(rdfs:label "mesometrium") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (future coelemic cavity lumen) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An anatomical cavity that has the potential to develop into a coelemic cavity lumen.") AnnotationAssertion( "uberon") AnnotationAssertion( "body cavity precursor") AnnotationAssertion( "UBERON:0003886") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "future coelemic cavity lumen") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (intraembryonic coelom) AnnotationAssertion(Annotation( "MGI:anna"^^xsd:string) Annotation( "MP:0012187") "The part of the coelom in the embryo between the somatopleuric and splanchnopleuric mesoderm; the principal body cavities of the trunk (thoracic, abdominal, and pelvic) arise from this embryonic part of the coelom.") AnnotationAssertion( "consider merging with coelom. TODO - add spatial relationships to halves of LPM. Note the OG places XAO and ZFA coelem terms here. editor note: TODO check ZFA, which appears to be a structure present in adults") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000316") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0198566694 Schmidt-Rhaesa A, The evolution of organ systems (2007) p.166") "(...) I regard it unlikely that coeloms of all bilaterian animals are comparable and evolved very early. Considering all these questions, few convincing characters concerning the evolution of body cavities remain to be named. (...) A segmental coelom appears to have evolved at least two times, in Annelida and in Myomerata (Acrania and Craniota).[well established][VHOG]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EHDAA:251") AnnotationAssertion( "EMAPA:16088") AnnotationAssertion( "NCIT:C34195") AnnotationAssertion(Annotation( "ncithesaurus:Intraembryonic_Coelom") "UMLS:C1512940") AnnotationAssertion( "VHOG:0000316") AnnotationAssertion(Annotation( ) "somatic coelom") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003887") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "intraembryonic coelom") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "Wikipedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (extraembryonic coelomic cavity) AnnotationAssertion(Annotation( "ISBN:0-12-402035-6") Annotation( "ISBN:1405118660") Annotation( "MP:0011200") "The fluid-filled spaces formed within the mass of extraembryonic mesoderm that later fuse to become a large extraembryonic cavity.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0000246") AnnotationAssertion( "EHDAA:146") AnnotationAssertion( "EMAPA:16081") AnnotationAssertion( "FMA:63943") AnnotationAssertion( "NCIT:C34165") AnnotationAssertion(Annotation( "ncithesaurus:Extraembryonic_Coelom") "UMLS:C1517055") AnnotationAssertion( "VHOG:0001671") AnnotationAssertion(Annotation( "EHDAA2:0000246") "chorion cavity") AnnotationAssertion(Annotation( ) Annotation( "EHDAA2:0000246") "chorionic cavity") AnnotationAssertion(Annotation( "VHOG:0001671") "exocoelomic cavity") AnnotationAssertion(Annotation( "FMA:63943") "extraembryonic celom") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "VHOG:0001671") "exocoelomic cavity") AnnotationAssertion(Annotation( "FMA:63943") "extra-embryonic celom") AnnotationAssertion(Annotation( "EMAPA:16081") "extra-embryonic coelomic cavity") AnnotationAssertion(Annotation( "FMA:63943") "extraembryonic celom") AnnotationAssertion(Annotation( "VHOG:0001671") "extraembryonic coelomic cavity") AnnotationAssertion( "UBERON:0003888") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "extraembryonic coelomic cavity") AnnotationAssertion(rdfs:seeAlso "https://github.com/obophenotype/uberon/issues/477"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (fallopian tube) AnnotationAssertion(Annotation( ) Annotation( "MGI:smb"^^xsd:string) Annotation( "MP:0003574") "Initial section of the oviduct through which the ova pass from the ovary to the uterus.") AnnotationAssertion(Annotation( ) "Homologous to appendix testis") AnnotationAssertion(Annotation( ) "salpinges") AnnotationAssertion( "salpinx") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "CALOHA:TS-0732") AnnotationAssertion( "EHDAA2:0000504") AnnotationAssertion( "EMAPA:18984") AnnotationAssertion( "EMAPA:35660") AnnotationAssertion( "EV:0100112") AnnotationAssertion( "FMA:18245") AnnotationAssertion( "GAID:365") AnnotationAssertion( "MA:0000385") AnnotationAssertion( "MESH:D005187") AnnotationAssertion( "NCIT:C12403") AnnotationAssertion( "OpenCyc:Mx4rvViVeZwpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Fallopian_Tube") "UMLS:C0015560") AnnotationAssertion( "galen:FallopianTube") AnnotationAssertion(Annotation( ) "mammalian oviduct") AnnotationAssertion( "uterine tube (sensu Mammalia)") AnnotationAssertion( "uberon") AnnotationAssertion( "fallopian tubes") AnnotationAssertion(Annotation( "EHDAA2:0000504") "female paramesonephric duct") AnnotationAssertion(Annotation( "EMAPA:35660") "paramesonephric duct of female") AnnotationAssertion(Annotation( ) Annotation( ) "tuba uterina") AnnotationAssertion( "UBERON:0003889") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "fallopian tube") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/6/68/Scheme_female_reproductive_system-en.svg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA-abduced-lr"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (Mullerian duct) AnnotationAssertion(Annotation( ) Annotation( ) Annotation( "GO:0061205") "Paired ducts of the embryo that run down the lateral sides of the urogenital ridge and terminate at the mullerian eminence in the primitive urogenital sinus. In the female, they will develop to form the fallopian tubes, uterus, and the upper portion of the vagina; in the male, they are lost. These ducts are made of tissue of mesodermal origin[WP]. develops either by lengthwise splitting of the archinephric duct (in chondrichthyans and some amphibians) or by a elongated invagination of the coelomic epithelium (other vertebrates) In males, the oviducts regress. The cranial end of the oviduct maintains an opening into the coelom (which primitively may have been the anteriormost coelomic funnels connecting the nephrocoel with the coelom). This opening is the ostium tubae[USM].") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001199") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( ) "Either of the paired embryonic ducts developing into the uterine tubes, uterus, and vagina in the female and becoming largely obliterated in the male. [TFD][VHOG]") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0010141") Annotation( "AAO"^^xsd:string) Annotation( "AAO:RED") "Transient developmental organ which gives rise to oviducts in female (documented to persist in some male frogs).[AAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001199") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0072528305 Kardong KV, Vertebrates: Comparative Anatomy, Function, Evolution (2006) p.559") "In females, the archinephric (mesonephric) ducts tend to function only within the urinary systems. The muellerian duct arises embryologically next to the archinephric (wolffian) duct. In males, the muellerian duct regresses if it appears at all, but in females, the muellerian ducts become the oviducts of the reproductive system.[well established][VHOG]") AnnotationAssertion( "Sertoli cells secrete anti-Mullerian hormone (AMH) inducing the demise of this duct") AnnotationAssertion( "UBERON:0005318") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010141") AnnotationAssertion( "EHDAA2:0004048") AnnotationAssertion( "EMAPA:27665") AnnotationAssertion( "GAID:1309") AnnotationAssertion( "MESH:A16.254.570") AnnotationAssertion( "NCIT:C13260") AnnotationAssertion( "RETIRED_EHDAA2:0001399") AnnotationAssertion(Annotation( "ncithesaurus:Mullerian_Duct") "UMLS:C0026732") AnnotationAssertion( "VHOG:0001199") AnnotationAssertion( "XAO:0000330") AnnotationAssertion( "Muellerian duct") AnnotationAssertion( "Müllerian duct") AnnotationAssertion( "ductus paramesonephricus") AnnotationAssertion(Annotation( "EMAPA:27665") "paramesonephric duct") AnnotationAssertion(Annotation( "EHDAA2:0004048") "early paramesonephric duct") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003890") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "Mullerian duct") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/6/6d/Gray1109.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "Wikipedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (stroma) AnnotationAssertion(Annotation( ) "Connective, non-functional supportive framework of a biological cell, tissue, or organ. Contrast with parenchyma.") AnnotationAssertion( "stromal") AnnotationAssertion( ) AnnotationAssertion( "FMA:81494") AnnotationAssertion( "NCIT:C67387") AnnotationAssertion(Annotation( "ncithesaurus:Stroma_Connective_Tissue") "UMLS:C0927195") AnnotationAssertion( "uberon") AnnotationAssertion( "stromal connective tissue") AnnotationAssertion( "UBERON:0003891") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "stroma") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (capsule) AnnotationAssertion(Annotation( ) "A cover or envelope partly or wholly surrounding a structure. Examples: egg shell, articular capsules, renal capsules[WP].") AnnotationAssertion( "capsular") AnnotationAssertion( ) AnnotationAssertion( "EHDAA:4739") AnnotationAssertion( "EHDAA:9061") AnnotationAssertion( "FMA:85272") AnnotationAssertion( "galen:Capsule") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003893") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "see also: protective structure surrounding some species of bacteria and fungi. Note that FMA has classes such as Articular capsule that are not subtypes of Capsule (which is undefined in FMA). GO has 'capsule' which is a fungal structure, and 'external encapsulating structure' which is restricted to cells") AnnotationAssertion(rdfs:label "capsule") SubClassOf( ) # Class: (liver primordium) AnnotationAssertion(Annotation( "ISBN:3211492755") "A small endodermal thickening in the foregut adjacent to the transverse septum. Invaginates forming the hepatic diverticulum.") AnnotationAssertion( "consider adding further subdivisions of the endoderm, e.g. ventral foregut. Note we place two EFO classes here, it's not clear how they differ") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0011058") AnnotationAssertion( "BTO:0003391") AnnotationAssertion( "EFO:0002577") AnnotationAssertion( "EFO:0003428") AnnotationAssertion( "EHDAA2:0000744") AnnotationAssertion( "EHDAA:973") AnnotationAssertion( "EMAPA:16847") AnnotationAssertion( "NCIT:C34277") AnnotationAssertion( "TAO:0000124") AnnotationAssertion(Annotation( "ncithesaurus:Hepatic_Cord") "UMLS:C0734013") AnnotationAssertion(Annotation( "ncithesaurus:Primordium_of_the_Liver") "UMLS:C1514451") AnnotationAssertion( "XAO:0003266") AnnotationAssertion( "ZFA:0000124") AnnotationAssertion(Annotation( ) "embryological hepatic plate") AnnotationAssertion(Annotation( "ncithesaurus:Primordium_of_the_Liver") "primordium of the liver") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "EHDAA2:0000744") "hepatic plate") AnnotationAssertion(Annotation( "XAO:0003266") Annotation( "ZFA:0000124") Annotation( ) "liver bud") AnnotationAssertion(Annotation( "EFO:0002577") "liver endoderm") AnnotationAssertion( "UBERON:0003894") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "liver primordium") SubClassOf(Annotation( "EHDAA2"^^xsd:string) ) SubClassOf(Annotation( "XAO"^^xsd:string) ) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "ventral foregut endoderm") Annotation( "Zaret 1996") ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses( ) # Class: (hypaxial myotome region) AnnotationAssertion(Annotation( "ISBN:0073040584"^^xsd:string) "Portion of myotome that is ventral to the horizontal septum.") AnnotationAssertion( "TAO:0001085") AnnotationAssertion( "ZFA:0001085") AnnotationAssertion(Annotation( "ZFA:0001085") "hypaxial myotome region") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "XAO:0003228") "body wall muscle") AnnotationAssertion( "UBERON:0003895") AnnotationAssertion(rdfs:label "hypaxial myotome region") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete muscle of body wall) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "Any muscle organ that is part of a body wall [Automatically generated definition].") AnnotationAssertion( "ANISEED:1235296") AnnotationAssertion( "BTO:0001863") AnnotationAssertion( "UBERON:0004462") AnnotationAssertion( "WBbt:0005813") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0001863") "wall muscle") AnnotationAssertion( "UBERON:0003896") AnnotationAssertion(rdfs:comment "obsoleted as it grouped together a worm-specific structure (BTO) with the vertebrate structure (which develops from the myotome)") AnnotationAssertion(rdfs:label "obsolete muscle of body wall") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (axial muscle) AnnotationAssertion(Annotation( "HP:0003327") "One of the skeletal muscles of the head and neck, spine, and ribs.") AnnotationAssertion( "EHDAA:5982") AnnotationAssertion( "EMAPA:18167") AnnotationAssertion( "MA:0003153") AnnotationAssertion( "RETIRED_EHDAA2:0000160") AnnotationAssertion( "TAO:0001954") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003897") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "axial muscle") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (skeletal muscle tissue of trunk) AnnotationAssertion(Annotation( ) "A portion of skeletal muscle tissue in the trunk.") AnnotationAssertion( ) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "skeletal muscle of torso") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "skeletal muscle tissue of torso") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "skeletal muscle tissue of trunk") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "torso skeletal muscle") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "torso skeletal muscle tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "trunk skeletal muscle") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "trunk skeletal muscle tissue") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003898") AnnotationAssertion(rdfs:label "skeletal muscle tissue of trunk") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (epaxial myotome region) AnnotationAssertion(Annotation( "ISBN:0073040584"^^xsd:string) "Portion of myotome that is dorsal to the horizontal septum.") AnnotationAssertion( "TAO:0001084") AnnotationAssertion( "ZFA:0001084") AnnotationAssertion(Annotation( "ZFA:0001084") Annotation( ) "epaxial myotome regions") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003900") AnnotationAssertion(rdfs:label "epaxial myotome region") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (horizontal septum) AnnotationAssertion(Annotation( "ISBN:0073040584"^^xsd:string) Annotation( "ZFA:0000671") "A logitudinal sheet of continuous connective tissue partition developing at the apex of the chevron-shaped myotome and separating dorsal (epaxial) and ventral (hypaxial) body wall muscle masses; each is destined to become, respectively, the epaxial and hyopaxial musculature.") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0000671") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "A connective tissue partition developing at the apex of the chevron-shaped myotome and separating dorsal (epaxial) and ventral (hypaxial) body wall muscle masses. Kimmel et al, 1995.[TAO]") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0000671") Annotation( "TAO"^^xsd:string) "relationship loss: subclass myoseptum (TAO:0001089)[TAO]") AnnotationAssertion( "EFO:0003555") AnnotationAssertion( "TAO:0000671") AnnotationAssertion( "ZFA:0000671") AnnotationAssertion(Annotation( "ZFA:0000671") "horizontal myoseptum") AnnotationAssertion( "uberon") AnnotationAssertion( "horizontal septum of vertebra") AnnotationAssertion( "UBERON:0003901") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "horizontal septum") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (retinal neural layer) AnnotationAssertion(Annotation( "GO:0003407") "The part of the retina that contains neurons and photoreceptor cells[GO].") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000535") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0030223693 Liem KF, Bemis WE, Walker WF, Grande L, Functional Anatomy of the Vertebrates: An Evolutionary Perspective (2001) p.429"^^xsd:string) "(...) an essentially similar sequence of events occurs during the embryonic development of the vertebrate eye. The eye initially develops as a single median evagination of the diencephalon that soon bifurcates to form the paired optic vesicles. As each optic vesicle grows towards the body surface, its proximal part narrows as the optic stalk, and its distal part invaginates to form a two-layered optic cup. (...) The outer layer of the optic cup becomes the pigment layer of the retina, whereas the inner layer differentiates into the photoreceptive cells and neuronal layers of the retina.[well established][VHOG]") AnnotationAssertion( ) AnnotationAssertion( "AAO:0011095") AnnotationAssertion( "BTO:0000929") AnnotationAssertion( "CALOHA:TS-0685") AnnotationAssertion( "EHDAA2:0001253") AnnotationAssertion( "EHDAA:4763") AnnotationAssertion( "EMAPA:17171") AnnotationAssertion( "EMAPA:18590") AnnotationAssertion( "FMA:58628") AnnotationAssertion( "MA:0000277") AnnotationAssertion( "NCIT:C33166") AnnotationAssertion( "TAO:0000046") AnnotationAssertion(Annotation( "ncithesaurus:Neural_Retina") "UMLS:C1518263") AnnotationAssertion( "VHOG:0000535") AnnotationAssertion( "XAO:0003216") AnnotationAssertion( "ZFA:0000046") AnnotationAssertion(Annotation( "FMA:58628") "neural layer of retina") AnnotationAssertion(Annotation( "XAO:0003216") Annotation( "ZFA:0000046") "neural retina") AnnotationAssertion(Annotation( "ZFA:0000046") "neuroretina") AnnotationAssertion(Annotation( "FMA:58628") "stratum nervosum (retina)") AnnotationAssertion(Annotation( "FMA:58628") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "stratum nervosum retinae") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "MA:000027") "neural retinal epithelium") AnnotationAssertion( "UBERON:0003902") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "retinal neural layer") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "Bgee:AN"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (cardiac jelly) AnnotationAssertion(Annotation( "ZFA:0001318") "Portion of extracellular matrix between the myocardium and the endocardium. The cardiac jelly plays a central role in the septation of the heart and comprises most of the thickness of the heart wall at early stages, but disappears as the heart differentiates.") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0001318") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "The extracellular matrix between the myocardium and the endocardium. The cardiac jelly plays a central role in the septation of the heart and comprises most of the thickness of the heart wall at early stages, but disappears as the heart differentiates.[TAO]") AnnotationAssertion( ) AnnotationAssertion( "EHDAA:1271") AnnotationAssertion( "EHDAA:1279") AnnotationAssertion( "EHDAA:1922") AnnotationAssertion( "EHDAA:1930") AnnotationAssertion( "EHDAA:426") AnnotationAssertion( "EHDAA:442") AnnotationAssertion( "EHDAA:450") AnnotationAssertion( "EHDAA:458") AnnotationAssertion( "EHDAA:466") AnnotationAssertion( "EHDAA:474") AnnotationAssertion( "EHDAA:772") AnnotationAssertion( "EHDAA:780") AnnotationAssertion( "EHDAA:788") AnnotationAssertion( "EHDAA:800") AnnotationAssertion( "EHDAA:808") AnnotationAssertion( "EMAPA:32687") AnnotationAssertion( "NCIT:C34115") AnnotationAssertion( "RETIRED_EHDAA2:0000212") AnnotationAssertion( "TAO:0001318") AnnotationAssertion(Annotation( "ncithesaurus:Cardiac_Jelly") "UMLS:C1516293") AnnotationAssertion( "VHOG:0000936") AnnotationAssertion( "XAO:0004120") AnnotationAssertion( "ZFA:0001318") AnnotationAssertion(Annotation( "VHOG:0000936") "heart cardiac jelly") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003906") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "cardiac jelly") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (left atrioventricular canal) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An atrioventricular canal that is in the left side of a atrioventricular region.") AnnotationAssertion( "https://github.com/obophenotype/uberon/wiki/Modeling-paired-structures-Design-Pattern"^^xsd:anyURI) AnnotationAssertion(Annotation( "EHDAA2"^^xsd:string) "EHDAA2 represents lumen") AnnotationAssertion( "EHDAA2:0000935") AnnotationAssertion( "EHDAA:5336") AnnotationAssertion( "FMA:71123") AnnotationAssertion( "left AVC") AnnotationAssertion(Annotation( "EHDAA2:0000935") "left atrio-ventricular canal") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003907") AnnotationAssertion(rdfs:label "left atrioventricular canal") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (right atrioventricular canal) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An atrioventricular canal that is in the right side of a atrioventricular region.") AnnotationAssertion( "https://github.com/obophenotype/uberon/wiki/Modeling-paired-structures-Design-Pattern"^^xsd:anyURI) AnnotationAssertion(Annotation( "EHDAA2"^^xsd:string) "EHDAA2 represents lumen") AnnotationAssertion( "EHDAA2:0001719") AnnotationAssertion( "EHDAA:5338") AnnotationAssertion( "FMA:71122") AnnotationAssertion( "right AVC") AnnotationAssertion(Annotation( "EHDAA2:0001719") "right atrio-ventricular canal") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003908") AnnotationAssertion(rdfs:label "right atrioventricular canal") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (sinusoid) AnnotationAssertion(Annotation( ) "Small blood vessel similar to a capillary but with a fenestrated endothelium. Sinusoids are found in the liver, lymphoid tissue, endocrine organs, and hematopoietic organs such as the bone marrow and the spleen. Sinusoids found within terminal villi of the placenta are not comparable to these; they possess a continuous endothelium and complete basal lamina[WP].") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0005261") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "Fenestrated blood vessel endothelium with pores that are large enough for blood cells to pass. The basal lamina and gap junctions may be discontinuous.[TAO]") AnnotationAssertion( "sinusoidal") AnnotationAssertion(Annotation( "FMA"^^xsd:string) "some sources give discontinuous capillary as synonym but this may be a subtype - see FMA:63198 discontinuous sinusoid (undefined).") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:63131") AnnotationAssertion( "TAO:0005261") AnnotationAssertion( "ZFA:0005261") AnnotationAssertion( "sinusoidal blood vessel") AnnotationAssertion(Annotation( "ZFA:0005261") "sinusoidal blood vessel endothelium") AnnotationAssertion( "uberon") AnnotationAssertion( "endothelium of irregular blood filled space") AnnotationAssertion(Annotation( ) "sinusoidal capillary") AnnotationAssertion( "sinusoidal endothelium") AnnotationAssertion( "UBERON:0003909") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "sinusoid") SubClassOf(Annotation( "Wikipedia"^^xsd:string) Annotation( "ZFA"^^xsd:string) ) # Class: (splenic sinusoid) AnnotationAssertion(Annotation( ) "Wide vessels in the spleen that drain into trabecular veins[WP].") AnnotationAssertion(Annotation( ) ) AnnotationAssertion(Annotation( ) ) AnnotationAssertion(Annotation( ) ) AnnotationAssertion(Annotation( ) ) AnnotationAssertion( "Whereas man and the rat are in the 'sinusal' group, the mouse belongs in the 'nonsinusal' group. The red pulp of spleens of rat, dog, man, and many other mammals contains an elaborate plexus of sinuses; that of mouse, cat, pig and others has no true sinuses and relatively few veins leading from the meshes into collecting veins - http://www.informatics.jax.org/greenbook/chapters/chapter13.shtml") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:63199") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "sinusoidal blood vessel of spleen") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:63199") "sinusoid of red pulp of spleen") AnnotationAssertion( "UBERON:0003910") AnnotationAssertion(rdfs:label "splenic sinusoid") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (choroid plexus epithelium) AnnotationAssertion(Annotation( ) Annotation( "UBERON:cjm"^^xsd:string) "The epithelial component of the choroid plexus. Consists of cuboidal epithelial cells surrounding a core of capillaries and loose connective tissue.") AnnotationAssertion( "The CP epithelial layer is continuous with the ependymal cell layer that lines the ventricles, but unlike the ependyma, the epithelial layer has tight gap junctions between the cells on the side facing the ventricle (apical surface). These gap junctions prevent the majority of substances from crossing the cell layer into the CSF; thus the CP acts as a blood-CSF barrier") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:36608") AnnotationAssertion( "FMA:242811") AnnotationAssertion( "MA:0000824") AnnotationAssertion( "NCIT:C42079") AnnotationAssertion(Annotation( "ncithesaurus:Choroid_Plexus_Epithelium") "UMLS:C1516506") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "choroid plexus epithelial tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelial tissue of chorioid plexus of cerebral hemisphere") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelial tissue of choroid plexus") AnnotationAssertion(Annotation( "FMA:242811") "epithelium of choroid plexus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003911") AnnotationAssertion(rdfs:label "choroid plexus epithelium") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (chitinous tooth) AnnotationAssertion(Annotation( ) "Tooth-like structure composed of chitin.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003912") AnnotationAssertion(rdfs:label "chitinous tooth") SubClassOf( ) # Class: (tooth-like structure) AnnotationAssertion(Annotation( ) "Hard bony, calcareous, or chitinous organ found in the mouth or pharynx of an animal and used in procuring or masticating food.") AnnotationAssertion( "HAO:0001019") AnnotationAssertion(Annotation( ) "tooth-like organ") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003913") AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "see dermal denticle") AnnotationAssertion(rdfs:label "tooth-like structure") SubClassOf( ) # Class: (epithelial tube) AnnotationAssertion(Annotation( ) Annotation( "GO:0060562") "Epithelial tubes transport gases, liquids and cells from one site to another and form the basic structure of many organs and tissues, with tube shape and organization varying from the single-celled excretory organ in Caenorhabditis elegans to the branching trees of the mammalian kidney and insect tracheal system.") AnnotationAssertion( "contrast with a multi-tissue tube, which has as parts both epithelium, connective tissue, possibly muscle layers") AnnotationAssertion( "AEO:0000114") AnnotationAssertion( "EHDAA2:0003114") AnnotationAssertion( "FBbt:00007474") AnnotationAssertion( "epithelial or endothelial tube") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003914") AnnotationAssertion(rdfs:label "epithelial tube") SubClassOf( ) SubClassOf( ) # Class: (endothelial tube) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "Any endothelium that has the quality of being cylindrical [Automatically generated definition].") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003915") AnnotationAssertion(rdfs:label "endothelial tube") SubClassOf( ) SubClassOf( ) # Class: (fat pad) AnnotationAssertion(Annotation( ) Annotation( "BTO:0000444") Annotation( "GO:0060613") "A mass of closely packed fat cells (adipose tissue) surrounded by fibrous tissue septa[TMD].") AnnotationAssertion(Annotation( "BTO") "An accumulation of adipose tissue (fat cells) enclosed in fibrous tissue[BTO].") AnnotationAssertion(Annotation( "FMA"^^xsd:string) "FMA says isa fascia organ. Note that XAO and AAO have structures called fat pad/body, but these are gonad-associated, so we place them with the gonad-specific subclass") AnnotationAssertion( "BTO:0000444") AnnotationAssertion( "EMAPA:35340") AnnotationAssertion( "FMA:58616") AnnotationAssertion( "MA:0002481") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:58616") "fat body") AnnotationAssertion( "UBERON:0003916") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "fat pad") SubClassOf( ) # Class: (kidney mesenchyme) AnnotationAssertion(Annotation( "GO:0072074") "Kidney mesenchyme is the tissue made up of loosely connected mesenchymal cells in the kidney[GO].") AnnotationAssertion( "check this") AnnotationAssertion( "mesenchyme of kidney") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003918") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "kidney mesenchyme") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete mesenchyme of adult kidney) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003919") AnnotationAssertion(rdfs:label "obsolete mesenchyme of adult kidney") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (venous blood vessel) AnnotationAssertion(Annotation( ) "A blood vessel that carries blood from the capillaries toward the heart.") AnnotationAssertion( "EMAPA:35932") AnnotationAssertion( "FMA:86188") AnnotationAssertion( "MA:0000066") AnnotationAssertion(Annotation( "FMA:86188") "segment of venous tree organ") AnnotationAssertion(Annotation( "FMA:86188") "venous tree organ segment") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003920") AnnotationAssertion(rdfs:comment "Compare to: vein") AnnotationAssertion(rdfs:label "venous blood vessel") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pancreas primordium) AnnotationAssertion(Annotation( ) "Embryonic structure that develops into pancreatic bud.") AnnotationAssertion(Annotation( "EHDAA2"^^xsd:string) "in EHDAA2 this has dorsal and ventral primordia as parts. the buds are part of the primordium, with the ducts developing from the buds; only parenchyma and ducts have contribution from buds") AnnotationAssertion( "revisit after standardizing terms 'primordium', 'anlagen', 'bud'") AnnotationAssertion( "EFO:0002579") AnnotationAssertion( "EFO:0003434") AnnotationAssertion( "EHDAA2:0001382") AnnotationAssertion( "EHDAA:2163") AnnotationAssertion( "EMAPA:17066") AnnotationAssertion( "FMA:79792") AnnotationAssertion( "TAO:0000254") AnnotationAssertion( "XAO:0001101") AnnotationAssertion( "ZFA:0000254") AnnotationAssertion( "pancreatic primordium") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "ZFA:0000254") "pancreatic anlage") AnnotationAssertion(Annotation( "EFO:0002579") "pancreatic endoderm") AnnotationAssertion(Annotation( "FMA:79792") "primordial pancreas") AnnotationAssertion( "UBERON:0003921") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "pancreas primordium") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/d/db/Gray982.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "Wikipedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pancreatic epithelial bud) AnnotationAssertion(Annotation( ) Annotation( ) "The embryonic pancreas develops from two separate anlagen in the foregut epithelium, one dorsal and two ventral pancreatic buds[PMID].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EFO:0003470") AnnotationAssertion( "EMAPA:35645") AnnotationAssertion( "NCIT:C34242") AnnotationAssertion( "TAO:0001390") AnnotationAssertion(Annotation( "ncithesaurus:Pancreatic_Bud") "UMLS:C1283285") AnnotationAssertion( "ZFA:0001390") AnnotationAssertion(Annotation( "ZFA:0001390") "pancreatic bud") AnnotationAssertion(Annotation( "TAO:0001390") Annotation( ) "pancreatic buds") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "EMAPA:35645") "pancreas epithelium") AnnotationAssertion( "pancreatic anlage") AnnotationAssertion( "UBERON:0003922") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "pancreatic epithelial bud") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/4/49/Suckale08FBS_fig1_pancreas_development.jpeg"^^xsd:anyURI) AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/d/db/Gray982.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2-inferred") ObjectSomeValuesFrom( )) # Class: (dorsal pancreatic bud) AnnotationAssertion(Annotation( ) "Pancreatic bud that gives rise to the accessory pancreatic duct.") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0011031") Annotation( "AAO"^^xsd:string) Annotation( "XAO:curator") "The pancreatic bud that gives rise to the accessory pancreatic duct.[AAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001428") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "DOI:10.1016/S0012-1606(03)00308-7 Field HA, Dong PD, Beis D, Stainier DY, Formation of the digestive system in zebrafish. II. Pancreas morphogenesis. Developmental Biology (2003), DOI:10.2337/diabetes.49.2.225 Polak M, Bouchareb-Banaei L, Scharfmann R, Czernichow P, Early pattern of differentiation in the human pancreas. Diabetes (2000)") "In chick, Xenopus laevis, and the teleost fish Medaka, the pancreas develops from three buds that emerge from the gut tube, two from its ventral aspect, and one from its dorsal aspect. In mouse, although there are initially three buds that arise from the gut tube at the point of contact between the endoderm and the vasculature, the pancreas develops from only two of these buds, one dorsal and one ventral. (...) In this study, we use a transgenic zebrafish line (...). We provide evidence for the existence of two distinct pancreatic anlagen - a ventral anterior bud and a dorsal posterior bud - that join to form the definitive pancreas (reference 1); The pancreas develops from the fusion of distinct endoderm-derived dorsal and ventral diverticula. In humans, by day 35 of development, the ventral pancreatic bud begins to migrate backwards and comes into contact and eventually fuses with the dorsal pancreatic bud during the sixth week of development (reference 2).[well established][VHOG]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0011031") AnnotationAssertion( "EFO:0003465") AnnotationAssertion( "EHDAA2:0001385") AnnotationAssertion( "EMAPA:17067") AnnotationAssertion( "TAO:0001370") AnnotationAssertion( "VHOG:0001428") AnnotationAssertion( "XAO:0000467") AnnotationAssertion( "ZFA:0001370") AnnotationAssertion(Annotation( "EHDAA2:0001385") "pancreas dorsal primordium duct bud") AnnotationAssertion( "pancreas primordium dorsal bud") AnnotationAssertion(Annotation( "XAO:0000467") "primary pancreatic bud") AnnotationAssertion( "uberon") AnnotationAssertion( "dorsal pancreas anlage") AnnotationAssertion( "dorsal pancreatic anlage") AnnotationAssertion( "posterior pancreatic anlage") AnnotationAssertion( "posterior pancreatic bud") AnnotationAssertion( "UBERON:0003923") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "dorsal pancreatic bud") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/d/db/Gray982.png"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "XAO"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (ventral pancreatic bud) AnnotationAssertion(Annotation( ) "Pancreatic bud that gives rise to the major pancreatic duct.") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001429") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "DOI:10.1016/S0012-1606(03)00308-7 Field HA, Dong PD, Beis D, Stainier DY, Formation of the digestive system in zebrafish. II. Pancreas morphogenesis. Developmental Biology (2003), DOI:10.2337/diabetes.49.2.225 Polak M, Bouchareb-Banaei L, Scharfmann R, Czernichow P, Early pattern of differentiation in the human pancreas. Diabetes (2000)") "In chick, Xenopus laevis, and the teleost fish Medaka, the pancreas develops from three buds that emerge from the gut tube, two from its ventral aspect, and one from its dorsal aspect. In mouse, although there are initially three buds that arise from the gut tube at the point of contact between the endoderm and the vasculature, the pancreas develops from only two of these buds, one dorsal and one ventral. (...) In this study, we use a transgenic zebrafish line (...). We provide evidence for the existence of two distinct pancreatic anlagen - a ventral anterior bud and a dorsal posterior bud - that join to form the definitive pancreas (reference 1); The pancreas develops from the fusion of distinct endoderm-derived dorsal and ventral diverticula. In humans, by day 35 of development, the ventral pancreatic bud begins to migrate backwards and comes into contact and eventually fuses with the dorsal pancreatic bud during the sixth week of development (reference 2).[well established][VHOG]") AnnotationAssertion( "The ventral pancreatic bud becomes the head and uncinate process, and comes from the hepatic diverticulum[WP]") AnnotationAssertion( "the ventral pancreas and liver are derived from a common precursor cell population[PMID:16417468]. TODO - add this relationship.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0011111") AnnotationAssertion( "EFO:0003464") AnnotationAssertion( "EHDAA2:0001389") AnnotationAssertion( "EMAPA:17256") AnnotationAssertion( "TAO:0001369") AnnotationAssertion( "VHOG:0001429") AnnotationAssertion( "XAO:0001103") AnnotationAssertion( "ZFA:0001369") AnnotationAssertion( "pancreas primordium ventral bud") AnnotationAssertion(Annotation( "EHDAA2:0001389") "pancreas ventral primordium duct bud") AnnotationAssertion( "uberon") AnnotationAssertion( "anterior pancreatic anlage") AnnotationAssertion( "anterior pancreatic bud") AnnotationAssertion( "ventral pancreas anlage") AnnotationAssertion( "ventral pancreatic anlage") AnnotationAssertion( "UBERON:0003924") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "ventral pancreatic bud") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/d/db/Gray982.png"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (photoreceptor inner segment layer) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Layer of the retina composed of the inner segments of the photoreceptor cells.") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001172") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0030223693 Liem KF, Bemis WE, Walker WF, Grande L, Functional Anatomy of the Vertebrates: An Evolutionary Perspective (2001) p.429"^^xsd:string) "(...) an essentially similar sequence of events occurs during the embryonic development of the vertebrate eye. The eye initially develops as a single median evagination of the diencephalon that soon bifurcates to form the paired optic vesicles. As each optic vesicle grows towards the body surface, its proximal part narrows as the optic stalk, and its distal part invaginates to form a two-layered optic cup. (...) The outer layer of the optic cup becomes the pigment layer of the retina, whereas the inner layer differentiates into the photoreceptive cells and neuronal layers of the retina.[well established][VHOG]") AnnotationAssertion( "EMAPA:35687") AnnotationAssertion( "MA:0002471") AnnotationAssertion( "TAO:0001465") AnnotationAssertion( "VHOG:0001172") AnnotationAssertion( "ZFA:0001465") AnnotationAssertion(Annotation( "MA:0002471") "retina photoreceptor layer inner segment") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "ZFA:0001465") Annotation( ) "photoreceptor inner segment layers") AnnotationAssertion( "UBERON:0003925") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "photoreceptor inner segment layer") SubClassOf( ) SubClassOf(Annotation( "MA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (photoreceptor outer segment layer) AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001173") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0030223693 Liem KF, Bemis WE, Walker WF, Grande L, Functional Anatomy of the Vertebrates: An Evolutionary Perspective (2001) p.429"^^xsd:string) "(...) an essentially similar sequence of events occurs during the embryonic development of the vertebrate eye. The eye initially develops as a single median evagination of the diencephalon that soon bifurcates to form the paired optic vesicles. As each optic vesicle grows towards the body surface, its proximal part narrows as the optic stalk, and its distal part invaginates to form a two-layered optic cup. (...) The outer layer of the optic cup becomes the pigment layer of the retina, whereas the inner layer differentiates into the photoreceptive cells and neuronal layers of the retina.[well established][VHOG]") AnnotationAssertion( "EMAPA:35688") AnnotationAssertion( "MA:0002472") AnnotationAssertion( "TAO:0001466") AnnotationAssertion( "VHOG:0001173") AnnotationAssertion( "ZFA:0001466") AnnotationAssertion(Annotation( "MA:0002472") "retina photoreceptor layer outer segment") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "ZFA:0001466") Annotation( ) "photoreceptor outer segment layers") AnnotationAssertion( "UBERON:0003926") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "photoreceptor outer segment layer") SubClassOf( ) SubClassOf(Annotation( "MA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete macula lagena) AnnotationAssertion(Annotation( ) "This term was obsoleted as it was previously defined midleadingly as 'A macula that is part of a cochlea'.") AnnotationAssertion( "ZFA:0000116") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003927") AnnotationAssertion(rdfs:label "obsolete macula lagena") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (digestive system duct) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A duct that is part of a digestive system [Automatically generated definition].") AnnotationAssertion( "TAO:0005162") AnnotationAssertion( "ZFA:0005162") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "duct of digestive system") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "duct of gastrointestinal system") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "gastrointestinal system duct") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003928") AnnotationAssertion(rdfs:label "digestive system duct") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (digestive tract epithelium) AnnotationAssertion(Annotation( ) "An epithelium that lines the lumen of the digestive tract.") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0005123") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "Epithelium lining the lumen of the gut.[TAO]") AnnotationAssertion( "") AnnotationAssertion( ) AnnotationAssertion( "BTO:0000956") AnnotationAssertion( "EHDAA2:0004567") AnnotationAssertion( "EMAPA:32928") AnnotationAssertion( "MA:0003201") AnnotationAssertion( "NCIT:C12963") AnnotationAssertion( "TAO:0005123") AnnotationAssertion(Annotation( "ncithesaurus:Gut_Epithelium") "UMLS:C0836205") AnnotationAssertion( "XAO:0003200") AnnotationAssertion( "ZFA:0005123") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "digestive tract epithelial tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelial tissue of digestive tract") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelial tissue of gut") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelium of digestive tract") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelium of gut") AnnotationAssertion(Annotation( "BGEE:ANN") Annotation( "NCBITaxon:6073") Annotation( ) "gastrodermis") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "gut epithelial tissue") AnnotationAssertion(Annotation( "EHDAA2:0004567") Annotation( "MA:0003201") Annotation( "ZFA:0005123") "gut epithelium") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "alimentary tract epithelium") AnnotationAssertion( "UBERON:0003929") AnnotationAssertion(rdfs:label "digestive tract epithelium") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (atrioventricular canal endocardium) AnnotationAssertion(Annotation( "ZFA:0001616") "Endocardium that is part of the atrioventricular canal[ZFA,vetted].") AnnotationAssertion( "TAO:0002170") AnnotationAssertion( "XAO:0004124") AnnotationAssertion( "ZFA:0001616") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "AV canal endocardium") AnnotationAssertion(Annotation( ) "AVC endocardium") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "endocardium of AV canal") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "endocardium of atrioventricular canal") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003930") AnnotationAssertion(rdfs:label "atrioventricular canal endocardium") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (diencephalic white matter) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "White matter that is part of a diencephalon [Automatically generated definition].") AnnotationAssertion( "UBERON:0023148") AnnotationAssertion( "BIRNLEX:1678") AnnotationAssertion( "FMA:83931") AnnotationAssertion( "TAO:0000338") AnnotationAssertion( "ZFA:0000338") AnnotationAssertion(Annotation( "ZFA:0000338") "diencephalic tract/commissure") AnnotationAssertion(Annotation( "TAO:0000338") Annotation( ) "diencephalic tracts and commissures") AnnotationAssertion(Annotation( "BIRNLEX:1678") "predominantly white regional part of diencephalon") AnnotationAssertion(Annotation( "FMA:83931") "white matter of diencephalon") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003931") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "diencephalic white matter") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (cartilage element of chondrocranium) AnnotationAssertion(Annotation( ) "A cartilage element of chondrocranium. Example: neurocranial trabecula.") AnnotationAssertion( "EFO:0003690") AnnotationAssertion( "TAO:0001461") AnnotationAssertion( "ZFA:0001461") AnnotationAssertion(Annotation( "OBOL:accepted"^^xsd:string) "cartilage of chondrocranium") AnnotationAssertion(Annotation( "OBOL:accepted"^^xsd:string) "cartilaginous element of chondrocranium") AnnotationAssertion(Annotation( "ZFA:0001461") "chondrocranium cartilage") AnnotationAssertion(Annotation( "ZFA:0001461") "neurocranium cartilage") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003932") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "cartilage element of chondrocranium") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (cranial cartilage) AnnotationAssertion(Annotation( ) Annotation( "ZFA:0001458") "A cartilage element that is part of the cranial skeleton.") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0001458") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "Cartilage which is part of the cranium.[TAO]") AnnotationAssertion( "TAO:0001458") AnnotationAssertion( "ZFA:0001458") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "cartilage of cranium") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "cranium cartilage") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "ZFA:0001458") Annotation( ) "cranial cartilages") AnnotationAssertion( "UBERON:0003933") AnnotationAssertion(rdfs:label "cranial cartilage") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (postoptic commissure) AnnotationAssertion( "EFO:0003478") AnnotationAssertion( "HBA:9371") AnnotationAssertion( "MBA:174") AnnotationAssertion( "TAO:0000059") AnnotationAssertion( "ZFA:0000059") AnnotationAssertion(Annotation( "ZFA:0000059") "POC") AnnotationAssertion(Annotation( "ZFA:0000059") "post optic commissure") AnnotationAssertion(Annotation( "ZFA:0000059") "post-optic commissure") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003936") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "postoptic commissure") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (reproductive gland) AnnotationAssertion(Annotation( "MP:0000653") "Any of the organized aggregations of cells that function as secretory or excretory organs and are associated with reproduction.") AnnotationAssertion( "MA:0001751") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "genitalia gland") AnnotationAssertion(Annotation( "MP:0000653") "gland of genitalia") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "gland of reproductive system") AnnotationAssertion(Annotation( "MA:0001751") "reproductive gland") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "reproductive system gland") AnnotationAssertion(Annotation( "MP:0000653") "sex gland") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003937") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "reproductive gland") SubClassOf( ) SubClassOf( ) # Class: (sensory dissociation area) AnnotationAssertion(Annotation( "MP:0000796") "The area of the parietal lobe that integrates tactile and visual stimuli.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003938") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "sensory dissociation area") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (transverse gyrus of Heschl) AnnotationAssertion(Annotation( ) Annotation( "MP:0000803") "The area of the temporal lobe concerned with hearing[MP]. The transverse temporal gyri (also called Heschl's gyri or Heschl's convolutions) are found in the area of primary auditory cortex in the superior temporal gyrus of the human brain, occupying Brodmann areas 41 and 42. It is the first cortical structure to process incoming auditory information. Anatomically, the transverse temporal gyri are distinct in that they run mediolaterally (towards the center of the brain) rather than dorsiventrally (front to back) as all other temporal lobe gyri run. The Heschl's gyri are named after Richard L. Heschl.") AnnotationAssertion( "UBERON:0022860") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:1389") AnnotationAssertion( "FMA:273671") AnnotationAssertion(Annotation( ) "Heshl's gyrus") AnnotationAssertion(Annotation( ) "transverse temporal gyrus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "gyri temporales transversi") AnnotationAssertion(Annotation( "BIRNLEX:1389") "transverse temporal cortex") AnnotationAssertion(Annotation( ) Annotation( ) "transverse temporal gyri") AnnotationAssertion( "UBERON:0003939") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "transverse gyrus of Heschl") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/9/91/Gray730.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (cerebellum anterior vermis) AnnotationAssertion(Annotation( "MP:0000867") "The anterior portion of the narrow middle zone between the two hemispheres of the cerebellum that is located anterior to the primary fissure.") AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:1185") AnnotationAssertion( "FMA:72255") AnnotationAssertion( "HBA:4699") AnnotationAssertion( "MA:0002969") AnnotationAssertion(Annotation( "MA:0002969") "anterior cerebellum vermis") AnnotationAssertion(Annotation( "FMA:72255") "anterior vermis of cerebellum") AnnotationAssertion(Annotation( "FMA:72255") "part of vermal region") AnnotationAssertion(Annotation( "FMA:72255") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "vermis lobus anterior") AnnotationAssertion(Annotation( "FMA:72255") "vermis of anterior lobe") AnnotationAssertion(Annotation( "FMA:72255") "vermis of anterior lobe of cerebellum") AnnotationAssertion(Annotation( "BIRNLEX:1185") "vermis of the anterior lobe of the cerebellum") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:72255") "anterior lobe vermis") AnnotationAssertion( "UBERON:0003941") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "cerebellum anterior vermis") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses(Annotation( "lexical"^^xsd:string) ) # Class: (somatic sensory system) AnnotationAssertion(Annotation( "NLXANAT:090818") "The sensory system for the sense of touch and pain.") AnnotationAssertion(Annotation( "MP:0000959") "The neural tissue involved in the transmission of sensory signals") AnnotationAssertion(Annotation( "MP") "MP defines this in a may more appropriate to somatosensory cortex") AnnotationAssertion( "UBERON:0014511") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37954") AnnotationAssertion( "NLXANAT:090818") AnnotationAssertion( "somatic sensory system") AnnotationAssertion(Annotation( "NLXANAT:090818") "somatosensory system") AnnotationAssertion( "system for detection of somatic senses") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003942") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "somatic sensory system") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (fourth lumbar dorsal root ganglion) AnnotationAssertion(Annotation( "MP:0001019") "The group of nerve cell bodies located on the dorsal spinal roots within the vertebral column at the level of the fourth lumbar vertebra.") AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:2626") AnnotationAssertion( "EMAPA:25167") AnnotationAssertion( "FMA:6338") AnnotationAssertion(Annotation( "BIRNLEX:2626") "UMLS:C0501716") AnnotationAssertion(Annotation( "MP:0001019") "L4 dorsal root ganglion") AnnotationAssertion(Annotation( "BIRNLEX:2626") "forth lumbar dorsal root ganglion") AnnotationAssertion(Annotation( ) "fourth lumbar dorsal root ganglion") AnnotationAssertion(Annotation( "FMA:6338") "fourth lumbar spinal ganglion") AnnotationAssertion( "uberon") AnnotationAssertion( "L4 ganglion") AnnotationAssertion( "UBERON:0003943") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "fourth lumbar dorsal root ganglion") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (somatic motor system) AnnotationAssertion(Annotation( "MP:0001051") "The neural tissue involved in the transmission of motor signals.") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37953") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003945") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "somatic motor system") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (brain ventricle/choroid plexus) AnnotationAssertion(Annotation( "MP:0002200") "The brain ventricles or their associated choroid plexuses.") AnnotationAssertion( "TODO - check relationship between CP and BV. If this is part of then this class should be obsoleted") AnnotationAssertion( "TODO merge into BV") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003947") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "brain ventricle/choroid plexus") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (blood-air barrier) AnnotationAssertion(Annotation( "MP:0002324") "The membrane between the capillary blood and alveolar air, comprised of the alveolar epithelium and the capillary epithelium and their adherent basement membranes and epithelial cell cytoplasm.") AnnotationAssertion( "TODO - alveolar lumen") AnnotationAssertion( "MESH:D015824") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003948") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "blood-air barrier") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (tubal tonsil) AnnotationAssertion(Annotation( "MP:0002386") "The lymph tissue associated with the pharyngeal opening of the auditory tube.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:54975") AnnotationAssertion(Annotation( "FMA:54975") "Gerlach's tonsil") AnnotationAssertion(Annotation( "FMA:54975") "Gerlach's tubal tonsil") AnnotationAssertion(Annotation( "FMA:54975") "auditory tube lymph gland") AnnotationAssertion(Annotation( "FMA:54975") "eustachian amygdala") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003949") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "tubal tonsil") SubClassOf( ) # Class: (inner ear canal) AnnotationAssertion(Annotation( "MP:0002729") "The tubular ducts of the inner ear.") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37882") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003950") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "inner ear canal") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (ocular fundus) AnnotationAssertion(Annotation( ) Annotation( "MP:0002864") "The posterior concave interior of the eye, consisting of the retina, the choroid, the posterior segment of the sclera, the optic disk, and blood vessels, visible by an ophthalmoscope.") AnnotationAssertion( "TODO - check relationships") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37916") AnnotationAssertion( "GAID:908") AnnotationAssertion( "MESH:D005654") AnnotationAssertion( "NCIT:C13378") AnnotationAssertion( "RETIRED_EHDAA2:0000583") AnnotationAssertion(Annotation( "ncithesaurus:Fundus") "UMLS:C0740422") AnnotationAssertion( "galen:FundusOculi") AnnotationAssertion( "eye fundus") AnnotationAssertion(Annotation( "HP:0001098") "fundus") AnnotationAssertion( "fundus oculi") AnnotationAssertion( "fundus of eye") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003951") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "ocular fundus") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (anterior stroma of cornea) AnnotationAssertion(Annotation( "MP:0003093") "The anterior segment of the lamellated connective tissue layer of the cornea.") AnnotationAssertion(Annotation( "MP:0003093") "anterior stroma") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37414") AnnotationAssertion(Annotation( "MP:0003093") "cornea anterior stroma") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003952") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "anterior stroma of cornea") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses(Annotation( "lexical"^^xsd:string) ) # Class: (posterior stroma of cornea) AnnotationAssertion(Annotation( "MP:0003094") "The posterior segment of the lamellated connective tissue layer of the cornea.") AnnotationAssertion(Annotation( "MP:0003094") "posterior stroma") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37415") AnnotationAssertion(Annotation( "MP:0003094") "cornea posterior stroma") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003953") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "posterior stroma of cornea") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (squamoparietal suture) AnnotationAssertion(Annotation( ) Annotation( "MP:0003844") "The articulation of the squamous portion of the temporal bones with the parietal bones[MP]. The squamosal suture arches backward from the pterion and connects the temporal squama with the lower border of the parietal: this suture is continuous behind with the short, nearly horizontal parietomastoid suture, which unites the mastoid process of the temporal with the region of the mastoid angle of the parietal[WP].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:19228") AnnotationAssertion( "FMA:52946") AnnotationAssertion(Annotation( "MP:0003844") "squamo-parietal suture") AnnotationAssertion( "squamoparietal suture of skull") AnnotationAssertion(Annotation( ) Annotation( ) "sutura squamosa cranii") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "squamosal suture") AnnotationAssertion(Annotation( ) "squamous suture") AnnotationAssertion(Annotation( "FMA:52946") "squamous suture of skull") AnnotationAssertion( "UBERON:0003954") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "squamoparietal suture") AnnotationAssertion( "Gray188-Squamosal:suture.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (molar crown) AnnotationAssertion(Annotation( "MP:0003932") "The part of a molar that is covered by enamel.") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37910") AnnotationAssertion( "FMA:85301") AnnotationAssertion(Annotation( "FMA:85301") "crown of molar tooth") AnnotationAssertion(Annotation( "FMA:85301") "molar tooth crown") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "molar tooth tooth crown") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "tooth crown of molar tooth") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003955") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "molar crown") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (aqueous drainage system) AnnotationAssertion(Annotation( "MP:0005198") "The structures associated with drainage of the aqueous humor from the eye, that include the trabecular meshwork, Schlemm's canal, the uveoscleral network, and the aqueous veins.") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37427") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003956") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "aqueous drainage system") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (Bruch's membrane) AnnotationAssertion(Annotation( ) Annotation( "MP:0005239") "A transparent, nearly structureless innermost layer of the choroid in contact with the pigmented layer of the retina.") AnnotationAssertion( "Bruch's membrane consists of five layers (from inside to outside): 1. the basement membrane of the retinal pigment epithelium; 2. the inner collagenous zone; 3. a central band of elastic fibers; 4. the outer collagenous zone; 5. the basement membrane of the choriocapillaris. The retinal pigment epithelium transports metabolic waste from the photoreceptors across Bruch's membrane to the choroid[WP]") AnnotationAssertion( "Bruch's membrane is present by midterm in fetal development as an elastic sheet.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "FMA:58438") "lamina basilis") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37450") AnnotationAssertion( "FMA:58438") AnnotationAssertion( "GAID:914") AnnotationAssertion( "MESH:D016570") AnnotationAssertion( "ZFA:0005562") AnnotationAssertion(Annotation( "MESH:A09.371.894.223.250") "Bruch membrane") AnnotationAssertion(Annotation( "FMA:58438") "Bruch's basal membrane") AnnotationAssertion(Annotation( "FMA:58438") "lamina basalis (choroid)") AnnotationAssertion(Annotation( "FMA:58438") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "lamina choroideae basalis") AnnotationAssertion(Annotation( "ZFA:0005562") "vitreous lamina") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:58438") "basal lamina of choroid") AnnotationAssertion( "UBERON:0003957") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "Bruch's membrane") AnnotationAssertion(rdfs:seeAlso "https://github.com/obophenotype/uberon/issues/14"^^xsd:anyURI) SubClassOf(Annotation( "ZFA"^^xsd:string) ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (long bone epiphyseal ossification zone) AnnotationAssertion(Annotation( "MP:0006399") "The layer of the epiphyseal plate where new bone matrix is deposited.") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37896") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003958") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "long bone epiphyseal ossification zone") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (rete testis) AnnotationAssertion(Annotation( ) Annotation( "MP:0006416") "An anastomosing network of delicate tubules located in the hilum of the testicle (mediastinum testis) that carries sperm from the seminiferous tubules to the vasa efferentia[WP].") AnnotationAssertion( "add more specific classification e.g. anastomosing network - consider FMA:3726") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:18332") AnnotationAssertion( "FMA:19834") AnnotationAssertion( "GAID:399") AnnotationAssertion( "MA:0003013") AnnotationAssertion( "MESH:D012152") AnnotationAssertion( "NCIT:C33467") AnnotationAssertion(Annotation( "ncithesaurus:Rete_Testis") "UMLS:C0035278") AnnotationAssertion(Annotation( "FMA:19834") "Haller's rete") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003959") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "rete testis") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/b/b5/Hodenschema.svg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "Wikipedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (styloid process of temporal bone) AnnotationAssertion(Annotation( ) Annotation( "MP:0008023") "Slender needle-like pointed projection that runs downward and slightly forward from the base of the inferior surface of the petrous portion of the temporal bone where it joins the tympanic portion; it gives attachment to the styloglossus, stylohyoid, and stylopharyngeus muscles and the stylohyoid and stylomandibular ligaments.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:36320") AnnotationAssertion( "FMA:52877") AnnotationAssertion(Annotation( "FMA:52877") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "processus styloideus") AnnotationAssertion(Annotation( ) "processus styloideus ossis temporalis") AnnotationAssertion(Annotation( "FMA:52877") "styloid process") AnnotationAssertion(Annotation( "FMA:52877") "styloid process of petrous part of temporal bone") AnnotationAssertion(Annotation( ) "temporal styloid process") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "processus styloideus ossis temporalis") AnnotationAssertion( "UBERON:0003960") AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "Disease notes: Eagle's syndrome") AnnotationAssertion(rdfs:label "styloid process of temporal bone") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/9/96/Gray137.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "ISBN:0073040584"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "MP-implied-by-def") ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (cingulum of brain) AnnotationAssertion(Annotation( "MP:0008232") "The white matter fiber bundle that projects from the cingulate gyrus to the entorhinal cortex in the brain.") AnnotationAssertion( "cingulum") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:cg") AnnotationAssertion( "DHBA:10572") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37828") AnnotationAssertion( "FMA:260761") AnnotationAssertion( "FMA:83869") AnnotationAssertion( "HBA:9240") AnnotationAssertion( "MBA:940") AnnotationAssertion(Annotation( "BAMS:cg") "cingulum bundle") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:260761") "cingulum of telencephalon") AnnotationAssertion(Annotation( "FMA:260761") "neuraxis cingulum") AnnotationAssertion( "UBERON:0003961") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "cingulum of brain") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses( ) # Class: (pterygopalatine ganglion) AnnotationAssertion(Annotation( ) Annotation( "MP:0008314") "The small parasympathetic ganglion that supplies nerve fibers to the lacrimal, nasal, palatine and pharyngeal glands.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:GptVII") AnnotationAssertion( "EHDAA2:0001889") AnnotationAssertion( "EMAPA:36275") AnnotationAssertion( "FMA:6965") AnnotationAssertion(Annotation( "MP:0008314") "Meckel ganglion") AnnotationAssertion(Annotation( "FMA:6965") "Meckel's ganglion") AnnotationAssertion(Annotation( "MP:0008314") "nasal ganglion") AnnotationAssertion(Annotation( "MP:0008314") "palatine ganglion") AnnotationAssertion(Annotation( "MP:0008314") "pterygopalatine ganglia") AnnotationAssertion(Annotation( "MP:0008314") "sphenopalatine ganglion") AnnotationAssertion(Annotation( "EHDAA2:0001889") "sphenopalatine parasympathetic ganglion") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "g. pterygopalatinum") AnnotationAssertion( "UBERON:0003962") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "pterygopalatine ganglion") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/a/a9/Gray779.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "definitional"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (otic ganglion) AnnotationAssertion(Annotation( ) Annotation( "MP:0008315") "The ganglion that supplies nerve fibers to the parotid gland.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:GoIX") AnnotationAssertion( "EHDAA2:0001335") AnnotationAssertion( "EHDAA:6706") AnnotationAssertion( "EMAPA:36274") AnnotationAssertion( "FMA:6967") AnnotationAssertion(Annotation( "FMA:6967") "Arnold's ganglion") AnnotationAssertion(Annotation( "EHDAA2:0001335") "otic parasympathetic ganglion") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "ganglion oticum") AnnotationAssertion( "UBERON:0003963") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "otic ganglion") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/6/64/Gray783.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (prevertebral ganglion) AnnotationAssertion(Annotation( "ISBN:0-683-40008-8"^^xsd:string) Annotation( "MP:0008316") "The sympathetic ganglia located in front of the vertebral column and are associated with the major branches of the abdominal aorta; these include the celiac, aorticorenal, superior and inferior mesenteric ganglia.") AnnotationAssertion( ) AnnotationAssertion( "FMA:5892") AnnotationAssertion( "MA:0003101") AnnotationAssertion(Annotation( "FMA:5892") "collateral ganglion") AnnotationAssertion(Annotation( "FMA:5892") "previsceral ganglion") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "collateral ganglia") AnnotationAssertion(Annotation( ) Annotation( ) "pre-aortic ganglia") AnnotationAssertion(Annotation( ) Annotation( ) "preaortic ganglia") AnnotationAssertion(Annotation( ) "prevertebral ganglion") AnnotationAssertion(Annotation( ) Annotation( ) "prevertebral plexuses") AnnotationAssertion(Annotation( ) Annotation( ) "three great gangliated plexuses") AnnotationAssertion( "UBERON:0003964") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "prevertebral ganglion") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (sympathetic afferent fiber) AnnotationAssertion(Annotation( "MP:0008319") "The fibers that conduct sensory nerve impulses from the viscera through the posterior dorsal roots into the spinal cord.") AnnotationAssertion( ) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003965") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "sympathetic afferent fiber") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (gonial bone) AnnotationAssertion(Annotation( "MP:0008380") "Investing bone that lies on the surface of the malleus.") AnnotationAssertion( "To be revisted after a review of auditory ossicles") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37874") AnnotationAssertion(Annotation( "MP:0008380") "gonium") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003966") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "gonial bone") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (cutaneous elastic tissue) AnnotationAssertion(Annotation( "MP:0008418") "The slender connective tissue fiber in the extracellular matrix of skin tissue that is composed of microfibrils and amorphous elastin and is characterized by great elasticity.") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37841") AnnotationAssertion(Annotation( "MP:0008418") "cutaneous elastic fiber") AnnotationAssertion(Annotation( "MP:0008418") "dermal elastic fiber") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003967") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "cutaneous elastic tissue") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (peripheral lymph node) AnnotationAssertion(Annotation( ) Annotation( "MP:0008463") "The lymph nodes located outside the thoracic and abdominal cavities, such as the submandibular, prescapular, axillary, inguinal and popliteal lymph nodes.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37938") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003968") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "peripheral lymph node") SubClassOf( ) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (interfrontal bone) AnnotationAssertion(Annotation( "MP:0008818") "A bone between the frontal bones in the skull; an extra bony plate within the anterior fontanelle that is not usually present.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003971") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "interfrontal bone") SubClassOf( ) # Class: (placenta junctional zone) AnnotationAssertion(Annotation( "MP:0008957") "Fetally derived placental region that separates the maternal uterine tissue from the placenta labyrinth.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003972") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "placenta junctional zone") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (nasal concha of ethmoid bone) AnnotationAssertion(Annotation( ) Annotation( "MP:0008971") "One of the conchae of the ethmoid bone, which occupy the caudal part of the nasal fossae and form the lateral and superior portions of the turbinate bones in mammals[MP]. The ethmoturbinals are associated with the cribiform plate. They are covered with olfactory epithelium. Primarily, they serve to increase the surface area over which olfactory receptor neurons can come in contact with respiratory air. These olfactory receptor nerves then synapse with the mitral cells of the olfactory lobes through the cribiform plate in the manner described above[Palaeos].") AnnotationAssertion(Annotation( "FMA"^^xsd:string) "FMA considers nasal concha and nasal concha of ethmoid bone to be synonymous. We disambiguate these here") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37914") AnnotationAssertion( "FMA:57456") AnnotationAssertion( "ethmo-turbinate") AnnotationAssertion(Annotation( ) "ethmoturbinal") AnnotationAssertion(Annotation( "MP:0008971") "ethmoturbinate") AnnotationAssertion( "nasal turbinate of ethmoid bone") AnnotationAssertion( "turbinate of ethmoid bone") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003973") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "nasal concha of ethmoid bone") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "ISBN:0073040584"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (upper part of vagina) AnnotationAssertion(Annotation( "MP:0009077") "The upper third of the vagina.") AnnotationAssertion( "relationship to caudal Mullerian duct?") AnnotationAssertion( "UBERON:0015242") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:18987") AnnotationAssertion( "FMA:27974") AnnotationAssertion( "MA:0003242") AnnotationAssertion(Annotation( "MP:0009077") "cranial vagina") AnnotationAssertion(Annotation( "FMA:27974") "pelvic part of vagina") AnnotationAssertion(Annotation( "MA:0003242") "vagina upper part") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "MP:0009077") "upper third of vagina") AnnotationAssertion(Annotation( "MP:0009077") "upper vagina") AnnotationAssertion( "UBERON:0003974") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "upper part of vagina") SubClassOf( ) SubClassOf(Annotation( "EMAPA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) SubClassOf( ObjectSomeValuesFrom( )) # Class: (internal female genitalia) AnnotationAssertion(Annotation( "MP:0009209") "The internal feminine genital organs, including the ovaries, uterine tubes, uterus, uterine cervix, and vagina.") AnnotationAssertion( ) AnnotationAssertion( "BTO:0003099") AnnotationAssertion( "FMA:45654") AnnotationAssertion(Annotation( "FMA:45654") "female internal genitalia") AnnotationAssertion(Annotation( "BTO:0003099") "internal female genital organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "internal genitalia of female reproductive system") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0003099") "organa genitalia feminina interna") AnnotationAssertion( "UBERON:0003975") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "TODO: Relabel. Make distinct organ class. See https://github.com/obophenotype/uberon/issues/547") AnnotationAssertion(rdfs:label "internal female genitalia") SubClassOf( ) SubClassOf( ) # Class: (saccule duct) AnnotationAssertion(Annotation( "MP:0009259") "The saccular portion of the utriculosaccular duct that normally extends from the sacculus to the endolymphatic duct.") AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37982") AnnotationAssertion( "FMA:77825") AnnotationAssertion(Annotation( "MP:0009259") "saccular duct") AnnotationAssertion( "saccular part of utriculosaccular duct") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003976") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "saccule duct") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (utricle duct) AnnotationAssertion(Annotation( "MP:0009260") "The utricular portion of the utriculosaccular duct that normally extends from the utriculus to the endolymphatic duct.") AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37981") AnnotationAssertion( "FMA:77824") AnnotationAssertion(Annotation( "MP:0009260") "utricular duct") AnnotationAssertion( "utricular part of utriculosaccular duct") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003977") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "utricle duct") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (valve) AnnotationAssertion( "valvular") AnnotationAssertion( "EHDAA2:0004046") AnnotationAssertion( "EHDAA:1892") AnnotationAssertion( "EHDAA:4406") AnnotationAssertion( "FMA:67611") AnnotationAssertion( "OpenCyc:Mx4rvqiwE5wpEbGdrcN5Y29ycA") AnnotationAssertion( "galen:Valve") AnnotationAssertion(Annotation( "FMA:67611") "anatomical valve") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003978") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "valve") SubClassOf( ) # Class: (utricle valve) AnnotationAssertion(Annotation( "MP:0009261") "The utriculo-endolymphatic (UE) valve which is located in the antero-inferior wall of the utricle at the orifice of the utricular duct and serves to regulate endolymph volume in the endolymphatic sac, the utricle and the canals.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003979") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "utricle valve") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (cerebellum fissure) AnnotationAssertion(Annotation( "MP:0009267") "One of a set of deep furrows which divide the lobules of the cerebellum. Examples: postcentral, primary and secondary furrows.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:CBf") AnnotationAssertion( "DHBA:12828") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37818") AnnotationAssertion( "FMA:321547") AnnotationAssertion( "HBA:9406") AnnotationAssertion( "cerebellar fissure") AnnotationAssertion(Annotation( "FMA:77789") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "fissurae cerebelli") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BAMS:CBf") Annotation( ) "cerebellar fissures") AnnotationAssertion(Annotation( "FMA:77789") Annotation( ) "cerebellar fissures set") AnnotationAssertion(Annotation( "HBA:9406") Annotation( ) "cerebellar sulci") AnnotationAssertion( "cerebellar sulcus") AnnotationAssertion(Annotation( "FMA:77789") Annotation( ) "set of cerebellar fissures") AnnotationAssertion( "sulcus of cerebellum") AnnotationAssertion( "UBERON:0003980") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "cerebellum fissure") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (primordial ovarian follicle) AnnotationAssertion(Annotation( "MP:0009361") "Primordial follicles are indiscernible to the naked eye and develop to primary, secondary, and finally mature vesicular follicles.") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:30755") AnnotationAssertion( "MA:0001710") AnnotationAssertion( "NCIT:C33400") AnnotationAssertion(Annotation( "ncithesaurus:Primordial_Follicle") "UMLS:C1514441") AnnotationAssertion(Annotation( "MA:0001710") "ovary primordial follicle") AnnotationAssertion( "primordial follicle") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003981") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "primordial ovarian follicle") SubClassOf( ) # Class: (mature ovarian follicle) AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0001264") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "Stage IV (690-730 microns) are oocyte maturation. Selman et al, 1993.[TAO]") AnnotationAssertion( "BTO:0000389") AnnotationAssertion( "EFO:0003653") AnnotationAssertion( "EMAPA:30777") AnnotationAssertion( "MA:0001709") AnnotationAssertion( "TAO:0001264") AnnotationAssertion( "ZFA:0001264") AnnotationAssertion(Annotation( "ZFA:0001264") "ovarian follicle stage IV") AnnotationAssertion(Annotation( "MA:0001709") "ovary mature follicle") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0000389") "antral follicle") AnnotationAssertion(Annotation( "BTO:0000389") "folliculi ovarici vesiculosi") AnnotationAssertion(Annotation( "BTO:0000389") "preovulatory follicle") AnnotationAssertion( "UBERON:0003982") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "mature ovarian follicle") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (conus arteriosus) AnnotationAssertion(Annotation( ) Annotation( "MP:0009464") "A conical pouch formed from the upper and left angle of the right ventricle in the chordate heart, from which the pulmonary artery arises[WP]. the anteriosuperior, smooth-walled portion of the cavity of the right ventricle, beginning at the supraventricular crest and terminates in the pulmonary trunk[MP].") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0010250") Annotation( "AAO"^^xsd:string) Annotation( "AAO:BJB"^^xsd:string) "Receives blood from the left atrium and becomes the median truncus arteriosus.[AAO]") AnnotationAssertion( "Kardong says absent in adult tetrapods, check AAO") AnnotationAssertion(Annotation( "ISBN:0073040584"^^xsd:string) "we use the term CA for the anterior chamber if it is composed of cardiac muscle, contractile, and contains conal valves internally") AnnotationAssertion( ) AnnotationAssertion( "AAO:0010250") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003983") AnnotationAssertion(rdfs:label "conus arteriosus") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/4/46/Gray492.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (uterine tube infundibulum) AnnotationAssertion(Annotation( ) Annotation( "MP:0009466") "The funnel-like expansion of the abdominal extremity of the uterine tube[MP].") AnnotationAssertion( ) AnnotationAssertion(Annotation( ) "The third part of the uterine tube is the infundibulum. It terminates with the ostium of Fallopian tube, surrounded by fimbriae, one of which is attached to the ovary[Wikipedia:Infundibulum_of_uterine_tube].") AnnotationAssertion(Annotation( ) "In mammals, the uterine tube infundibulum is part of the fallopian tube. In birds, where there is no fallopian tube, the uterine tube infundibulum is part of the oviduct.") AnnotationAssertion(Annotation( ) "infundibulum") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:29897") AnnotationAssertion( "FMA:18307") AnnotationAssertion(Annotation( "FMA:18307") "infundibulum of oviduct") AnnotationAssertion(Annotation( "FMA:18307") "infundibulum of uterine tube") AnnotationAssertion(Annotation( "FMA:18307") "infundibulum of fallopian tube") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "infundibulum tubae uterinae") AnnotationAssertion( "UBERON:0003984") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "uterine tube infundibulum") AnnotationAssertion( "Illu:cervix.jpg"^^xsd:anyURI) SubClassOf( ) # Class: (major sublingual duct) AnnotationAssertion(Annotation( "MP:0009528") "The duct that drains the anterior portion of the sublingual gland and opens at the sublingual papilla.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0004558") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37899") AnnotationAssertion( "FMA:59986") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:59986") Annotation( ) "Bartholin's duct") AnnotationAssertion( "UBERON:0003985") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "major sublingual duct") SubClassOf( ) DisjointClasses( ) # Class: (minor sublingual duct) AnnotationAssertion(Annotation( "MP:0009529") "Any of the 8-20 small ducts that open into the mouth on the surface of the sublingual fold.") AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37909") AnnotationAssertion( "FMA:59987") AnnotationAssertion(Annotation( ) "duct of Rivinus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003986") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "minor sublingual duct") SubClassOf( ) # Class: (Hassall's corpuscle) AnnotationAssertion(Annotation( "MP:0009539") "The small spherical bodies of epithelial cells found in the medulla of the thymus, that are arranged in a concentric pattern around clusters of degenerating lymphocytes, eosinophils and macrophages.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:35395") AnnotationAssertion( "MA:0000772") AnnotationAssertion( "NCIT:C13170") AnnotationAssertion(Annotation( "ncithesaurus:Hassall_s_Corpuscle") "UMLS:C0229950") AnnotationAssertion(Annotation( ) "capsule of Hassal's corpuscle") AnnotationAssertion( "thymic corpuscle") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003987") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "Hassall's corpuscle") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (thymus corticomedullary boundary) AnnotationAssertion(Annotation( "MP:0009543") "The dense region demarcating the thymus medulla from the surrounding cortex that is characterized by numerous blood vessels (predominantly arterioles) with some perivascular connective tissue, mature and immature T lymphocytes, dendritic cells, variable numbers of perivascular B-lymphocytes and plasma cells; site of entry of bone marrow stem cells and exit of mature, functional T cells.") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37974") AnnotationAssertion(Annotation( "MP:0009543") "thymic cortico-medullary boundary") AnnotationAssertion(Annotation( "MP:0009543") "thymic corticomedullary boundary") AnnotationAssertion(Annotation( "MP:0009543") "thymic corticomedullary junction") AnnotationAssertion(Annotation( "MP:0009543") "thymic corticomedullary zone") AnnotationAssertion(Annotation( "MP:0009543") "thymus CMZ") AnnotationAssertion(Annotation( "MP:0009543") "thymus cortico-medullary boundary") AnnotationAssertion(Annotation( "MP:0009543") "thymus corticomedullary junction") AnnotationAssertion(Annotation( "MP:0009543") "thymus corticomedullary zone") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003988") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "thymus corticomedullary boundary") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) SubClassOf( ObjectSomeValuesFrom( )) # Class: (medulla oblongata anterior median fissure) AnnotationAssertion(Annotation( "MP:0009680") "The longitudinal groove in the midline of the anterior aspect of the medulla oblongata.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:amf") AnnotationAssertion( "FMA:83734") AnnotationAssertion(Annotation( "FMA:83734") "anterior median fissure") AnnotationAssertion(Annotation( "FMA:83734") "anterior median fissure of medulla") AnnotationAssertion(Annotation( "FMA:83734") "anterior median fissure of medulla oblongata") AnnotationAssertion(Annotation( "FMA:83734") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "fissura mediana anterior medullae oblongatae") AnnotationAssertion(Annotation( "FMA:83734") "ventral median fissure of medulla") AnnotationAssertion(Annotation( "FMA:83734") "ventral median sulcus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003989") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "medulla oblongata anterior median fissure") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (spinal cord motor column) AnnotationAssertion(Annotation( "MP:0009685") "The subclasses of motor neurons which are organized into longitudinally oriented columns that occupy distinct and, in some cases, discontinuous domains along the rostrocaudal axis of the spinal cord; motor neurons within a single column send their axons to a common peripheral target.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003990") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "spinal cord motor column") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (fourth ventricle median aperture) AnnotationAssertion(Annotation( ) Annotation( "MP:0009802") "The large midline opening of the posterior inferior part of the roof of the fourth ventricle that connects the fourth ventricle to the posterior cerebromedullary cistern and the spinal cord.") AnnotationAssertion(Annotation( "MP:0009802") "median aperture") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:MA4V") AnnotationAssertion( "BAMS:MAP") AnnotationAssertion( "FMA:75015") AnnotationAssertion( "MA:0002947") AnnotationAssertion( "NCIT:C32626") AnnotationAssertion(Annotation( "ncithesaurus:Foramen_of_Magendie") "UMLS:C0152288") AnnotationAssertion(Annotation( "FMA:75015") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "apertura mediana") AnnotationAssertion(Annotation( "FMA:75015") "foramen of Magendie") AnnotationAssertion(Annotation( "FMA:75015") "foramen of Majendie") AnnotationAssertion(Annotation( "MA:0002947") "fourth ventricle median aperture") AnnotationAssertion(Annotation( "FMA:75015") "median aperture of fourth ventricle") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "apertura mediana ventriculi quarti") AnnotationAssertion(Annotation( "MA:0002947") "arachnoid forament") AnnotationAssertion( "UBERON:0003991") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "fourth ventricle median aperture") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/b/b9/Gray708.svg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (fourth ventricle lateral aperture) AnnotationAssertion(Annotation( ) Annotation( "MP:0009803") "One of the two lateral openings of the fourth ventricle into the subarachnoid space at the cerebellopontine angle[MP].") AnnotationAssertion(Annotation( "MP:0009803") "lateral aperture") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:LA4V") AnnotationAssertion( "BAMS:LAP") AnnotationAssertion( "FMA:78473") AnnotationAssertion( "MA:0002946") AnnotationAssertion( "NCIT:C32625") AnnotationAssertion(Annotation( "ncithesaurus:Foramen_of_Luschka") "UMLS:C0152287") AnnotationAssertion(Annotation( "FMA:78473") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "apertura lateralis") AnnotationAssertion(Annotation( "FMA:78473") "foramen of Key-Retzius") AnnotationAssertion(Annotation( "FMA:78473") "foramen of Luschka") AnnotationAssertion(Annotation( "FMA:78473") "foramen of Retzius") AnnotationAssertion(Annotation( "FMA:78473") "foramen of key and retzius") AnnotationAssertion(Annotation( "FMA:78473") "lateral aperture of fourth ventricle") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "apertura lateralis ventriculi quarti") AnnotationAssertion(Annotation( "MA:0002946") "forament of Luschka") AnnotationAssertion( "UBERON:0003992") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "fourth ventricle lateral aperture") AnnotationAssertion( "Lateral:ventricle.gif"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (interventricular foramen of CNS) AnnotationAssertion(Annotation( ) Annotation( "MP:0009804") "The paired channels that connect the lateral and third ventricles and allows cerebrospinal fluid produced in the lateral ventricles to flow into the third ventricles.") AnnotationAssertion(Annotation( "FMA"^^xsd:string) "it is not clear if the FMA class refers to CNS or heart ventricles") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:IVF") AnnotationAssertion( "BAMS:ivf") AnnotationAssertion( "DHBA:10608") AnnotationAssertion( "EMAPA:36067") AnnotationAssertion( "FMA:75351") AnnotationAssertion( "MBA:124") AnnotationAssertion( "NCIT:C32627") AnnotationAssertion(Annotation( "ncithesaurus:Foramen_of_Monroe") "UMLS:C0016520") AnnotationAssertion(Annotation( ) "foramen Monroi") AnnotationAssertion(Annotation( ) Annotation( ) "foramen interventriculare") AnnotationAssertion(Annotation( "FMA:75351") "interventricular foramen") AnnotationAssertion(Annotation( ) "interventricular foramina") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003993") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "interventricular foramen of CNS") SubClassOf(Annotation( "EHDAA2"^^xsd:string) ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) SubClassOf(Annotation( "MP"^^xsd:string) ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses( ) # Class: (pelvic ligament) AnnotationAssertion(Annotation( "MP:0009807") "The dorsal sacroiliac, the sacrotuberal and/or the iliolumbar ligaments associated with the bony ring formed by the pair of hip bones fused at the symphysis and their firm articulation with the sacrum.") AnnotationAssertion( "MA:0002948") AnnotationAssertion(Annotation( "MA:0002948") "pelvis ligament") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003994") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "pelvic ligament") SubClassOf( ) SubClassOf( ) # Class: (subarcuate fossa) AnnotationAssertion(Annotation( "MP:0009822") "The irregular depression found on the posterior inner surface of the petrous portion of the temporal bone just below its crest and above and lateral to the internal acoustic meatus[MP].") AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37967") AnnotationAssertion( "FMA:56418") AnnotationAssertion(Annotation( "FMA:56418") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "fossa subarcuata") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0003995") AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "In the temporal bone, above and between the aquæductus vestibuli is an irregular depression which lodges a process of the dura mater and transmits a small vein and the subarcuate artery[1] a branch of the internal auditory artery, which is an end artery that supplies blood to the inner ear ; in the infant this depression is represented by a large fossa, the subarcuate fossa, which extends backward as a blind tunnel under the superior semicircular canal. It is extensive in most primates (except for great apes) and nearly all mammals. In these animals, the subarcuate fossa houses a part of the cerebellum, the petrosal lobe[WP]") AnnotationAssertion(rdfs:label "subarcuate fossa") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (cervical vertebra 1 arcus anterior) AnnotationAssertion(Annotation( "MP:0009879") "The arch that connects the lateral masses of the atlas anteriorly and articulates with the anterior articular facet of the dens of the axis[MP].") AnnotationAssertion( "UBERON:0005209") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:23976") AnnotationAssertion( "MA:0002954") AnnotationAssertion(Annotation( "MA:0002954") "anterior arch of atlas") AnnotationAssertion(Annotation( "MP:0009879") "arcus anterior") AnnotationAssertion(Annotation( "MA:0002954") "arcus anterior atlantis") AnnotationAssertion(Annotation( "MA:0002954") "cervical vertebra 1 arcus anterior") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "arcus anterior atlantis") AnnotationAssertion( "UBERON:0003996") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "cervical vertebra 1 arcus anterior") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/9/9a/Arcusanterioratlantis.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses(Annotation( "lexical"^^xsd:string) ) # Class: (hyoid bone greater horn) AnnotationAssertion(Annotation( ) Annotation( "MP:0009913") "The larger and more lateral of the paired processes on either side of the hyoid bone[MP].") AnnotationAssertion(Annotation( ) "The greater cornua (or greater horns) of the hyoid bone project backward from the lateral borders of the body; they are flattened from above downward and diminish in size from before backward; each ends in a tubercle to which is fixed the lateral hyothyroid ligament. The upper surface is rough close to its lateral border, for muscular attachments: the largest of these are the origins of the hyoglossus and Constrictor pharyngis medius which extend along the whole length of the cornu; the digastric muscle and stylohyoid muscle have small insertions in front of these near the junction of the body with the cornu. To the medial border the hyothyroid membrane is attached, while the anterior half of the lateral border gives insertion to the thyrohyoid. The greater cornua derive from the 3rd pharyngeal arches[Wikipedia:Greater_cornu].") AnnotationAssertion(Annotation( ) "In humans, the greater cornua are the larger, more lateral projections from the left and right borders of the body of hyoid bone. They are in contrast to the lesser cornua, which also occur in pairs but are comparatively smaller and conical in shape. The greater cornua are derived from the third pharyngeal arches.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:18651") AnnotationAssertion( "FMA:59496") AnnotationAssertion( "MA:0002959") AnnotationAssertion(Annotation( "FMA:59496") "cornu majus") AnnotationAssertion(Annotation( "FMA:59496") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "cornu majus ossis hyoidei") AnnotationAssertion(Annotation( ) "cornua majora") AnnotationAssertion(Annotation( "FMA:59496") "greater cornu") AnnotationAssertion(Annotation( ) "greater cornua") AnnotationAssertion(Annotation( "FMA:59496") "greater horn") AnnotationAssertion(Annotation( "FMA:59496") "greater horn of hyoid") AnnotationAssertion(Annotation( "FMA:59496") "greater horn of hyoid bone") AnnotationAssertion(Annotation( ) "tyrohal") AnnotationAssertion(Annotation( ) "tyrohals") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "CHECKME:CHECKME") "epibranchial") AnnotationAssertion(Annotation( "CHECKME:CHECKME") "epibranchial of gill arch I") AnnotationAssertion(Annotation( "CHECKME:CHECKME") "epibranchial of pharyngeal arch III") AnnotationAssertion(Annotation( ) "greater cornua") AnnotationAssertion(Annotation( ) "greater horn of the hyoid") AnnotationAssertion(Annotation( "MA:0002959") "hyoid bone greater cornu") AnnotationAssertion( "hyoid bone long horn") AnnotationAssertion(Annotation( "MA:0002959") "hyoid bone superior horn") AnnotationAssertion(Annotation( "MA:0002959") "hyoid bone upper horn") AnnotationAssertion( "posterior horn of hyoid") AnnotationAssertion(Annotation( "ISBN:0073040584"^^xsd:string) "second horn of hyoid") AnnotationAssertion( "UBERON:0003997") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "hyoid bone greater horn") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ) SubClassOf(Annotation( "FMA-abduced-lr"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "Wikipedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (hyoid bone lesser horn) AnnotationAssertion(Annotation( ) Annotation( "MP:0009914") "Shorter and more medial of the paired processes on either side of the hyoid bone[MP].") AnnotationAssertion(Annotation( ) "The lesser cornua (or lesser horns) are two small, conical eminences, attached by their bases to the angles of junction between the body and greater cornua of the hyoid bone. They are connected to the body of the bone by fibrous tissue, and occasionally to the greater cornua by distinct diarthrodial joints, which usually persist throughout life, but occasionally become ankylosed. The lesser cornua are situated in the line of the transverse ridge on the body and appear to be morphological continuations of it. The apex of each cornu gives attachment to the stylohyoid ligament; the Chondroglossus rises from the medial side of the base. The lesser cornua are derived from the 2nd pharyngeal arches[Wikipedia:Lesser_cornu].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:18652") AnnotationAssertion( "FMA:59499") AnnotationAssertion( "MA:0002960") AnnotationAssertion(Annotation( "FMA:59499") "cornu minus") AnnotationAssertion(Annotation( "FMA:59499") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "cornu minus ossis hyoidei") AnnotationAssertion(Annotation( "FMA:59499") "lesser cornu") AnnotationAssertion( "lesser cornu of hyoid") AnnotationAssertion(Annotation( ) "lesser cornua") AnnotationAssertion(Annotation( "FMA:59499") "lesser horn") AnnotationAssertion(Annotation( "FMA:59499") "lesser horn of hyoid") AnnotationAssertion(Annotation( "FMA:59499") "lesser horn of hyoid bone") AnnotationAssertion( "lesser horn of the hyoid") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "ISBN:0073040584"^^xsd:string) "anterior horn of hyoid") AnnotationAssertion(Annotation( "ISBN:0073040584"^^xsd:string) Annotation( ) "ceratohyal") AnnotationAssertion(Annotation( "MA:0002960") "hyoid bone lesser cornu") AnnotationAssertion(Annotation( "MA:0002960") "hyoid bone lower horn") AnnotationAssertion( "UBERON:0003998") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "hyoid bone lesser horn") SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "FMA-abduced-lr"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "MP-implied-by-def") ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (hyoid bone body) AnnotationAssertion(Annotation( ) Annotation( "MP:0009917") "The main curve of the hyoid bone, from which the horns extend.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:18653") AnnotationAssertion( "FMA:59495") AnnotationAssertion( "MA:0002958") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "MA:0002958") "base of hyoid bone") AnnotationAssertion(Annotation( "MA:0002958") "basihyal bone") AnnotationAssertion(Annotation( "MA:0002958") "basihyoid bone") AnnotationAssertion(Annotation( "ISBN:0073040584"^^xsd:string) "body of hyoid") AnnotationAssertion(Annotation( "MA:0002958") "body of hyoid bone") AnnotationAssertion(Annotation( ) Annotation( ) "corpus ossis hyoidei") AnnotationAssertion(Annotation( "MA:0002958") "hyoid bone base") AnnotationAssertion( "UBERON:0003999") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "hyoid bone body") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/1/1f/Gray186.png"^^xsd:anyURI) SubClassOf(Annotation( "cjm"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (tarsal gland acinus) AnnotationAssertion(Annotation( "MP:0009935") "A sac-like structure comprising a sebaceous gland.") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37972") AnnotationAssertion( "Meibomian gland acinus") AnnotationAssertion( "acinus of tarsal gland") AnnotationAssertion( "uberon") AnnotationAssertion( "palpebral gland acinus") AnnotationAssertion( "UBERON:0004000") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "tarsal gland acinus") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (olfactory bulb layer) AnnotationAssertion( "TODO - check isa parentage") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37917") AnnotationAssertion( "NLXANAT:20090402") AnnotationAssertion(Annotation( "NLXANAT:20090402") "cytoarchitectural part of olfactory bulb") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004001") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "olfactory bulb layer") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (posterior lobe of cerebellum) AnnotationAssertion(Annotation( "MP:0009962") "The region of the cerebellum that is posterior to the primary fissure and anterior to the posteriolateral fissure.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:PLCb") AnnotationAssertion( "BIRNLEX:911") AnnotationAssertion( "DHBA:12844") AnnotationAssertion( "EMAPA:35222") AnnotationAssertion( "FMA:72252") AnnotationAssertion( "MA:0002964") AnnotationAssertion( "cerebellar posterior lobe") AnnotationAssertion( "cerebellum posterior lobe") AnnotationAssertion(Annotation( "FMA:72252") "middle lobe-1 of cerebellum") AnnotationAssertion(Annotation( "FMA:72252") "posterior cerebellar lobe") AnnotationAssertion( "posterior lobe of cerebellum") AnnotationAssertion(Annotation( "BIRNLEX:911") "posterior lobe of the cerebellum") AnnotationAssertion(Annotation( "FMA:72252") "posterior lobe-1 of cerebellum") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:72252") "cerebrocerebellum") AnnotationAssertion( "UBERON:0004002") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "posterior lobe of cerebellum") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (cerebellum hemisphere lobule) AnnotationAssertion(Annotation( "MP:0009963") "The region of a cerebellar lobule that resides in either of the lateral sections of the cerebellum outside the vermis; in mammals, the vermis portion of the cerebellum has a foliation pattern along the AP axis that is distinct from the lateral cerebellar hemispheres.") AnnotationAssertion( "TODO - define as a region overlapping the lobule") AnnotationAssertion( "FMA:83880") AnnotationAssertion( "MA:0002967") AnnotationAssertion( "NLXANAT:20081201") AnnotationAssertion( "cerebellar hemisphere lobule") AnnotationAssertion(Annotation( "FMA:83880") "lobule of cerebellar hemisphere") AnnotationAssertion(Annotation( "FMA:83880") "lobule of hemisphere of cerebellum") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004003") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "cerebellum hemisphere lobule") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (cerebellum lobule) AnnotationAssertion(Annotation( "MP:0009964") "One of the the ten gyri of the cerebellar cortex.") AnnotationAssertion( "BIRNLEX:1084") AnnotationAssertion( "MA:0002966") AnnotationAssertion(Annotation( "BIRNLEX:1084") "lobular parts of the cerebellar cortex") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004004") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "cerebellum lobule") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (cerebellum intermediate zone) AnnotationAssertion(Annotation( "MP:0009966") "The paired regions of the cerebellar hemisphere that lie adjacent to the vermis and are between the vermis and lateral regions of the hemispheres; it receives input from the corticopontocerebellar fibers that originate from the motor cortex, and also receives sensory feedback from the muscles; these signals are integrated by this region, to coordinate muscle activity with motor inputs.") AnnotationAssertion( "UBERON:0014342") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37822") AnnotationAssertion( "HBA:9611") AnnotationAssertion( "NLXANAT:20081236") AnnotationAssertion( "PBA:294021942") AnnotationAssertion(Annotation( "MP:0009966") "cerebellar paravermis") AnnotationAssertion(Annotation( "NLXANAT:20081236") "cerebellar paravermis") AnnotationAssertion(Annotation( "MP:0009966") "cerebellum intermediate hemisphere") AnnotationAssertion(Annotation( "MP:0009966") "intermediate part of spinocerebellum") AnnotationAssertion(Annotation( "NLXANAT:20081236") "intermediate zone") AnnotationAssertion(Annotation( "MP:0009966") "paravermis") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "paleocerebellum") AnnotationAssertion(Annotation( "NeuroNames:2129") "paravermal zone of the cerebellum") AnnotationAssertion(Annotation( ) "spinocerebellum") AnnotationAssertion( "UBERON:0004006") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "cerebellum intermediate zone") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (cerebellar plate) AnnotationAssertion(Annotation( "MP:0000856") "The embryonic pseudostratified epithelium of the fourth cerebellar ventricle that eventually forms the vermis and ventral neuroepithelium.") AnnotationAssertion( ) AnnotationAssertion( "DHBA:12698") AnnotationAssertion( "EHDAA2:0004401") AnnotationAssertion( "cerebellum plate") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "EHDAA2:0004401") "cerebellum roof plate") AnnotationAssertion( "UBERON:0004008") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "cerebellar plate") SubClassOf(Annotation( "EHDAA2"^^xsd:string) ) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (cerebellum posterior vermis) AnnotationAssertion(Annotation( "MP:0000869") "The posterior portion of the narrow middle zone between the two hemispheres of the cerebellum that is located posterior to the primary fissure.") AnnotationAssertion( ) AnnotationAssertion( "BAMS:VPLb") AnnotationAssertion( "FMA:72259") AnnotationAssertion( "HBA:4704") AnnotationAssertion( "MA:0002970") AnnotationAssertion( "NLXANAT:20081240") AnnotationAssertion( "posterior cerebellum vermis") AnnotationAssertion(Annotation( "FMA:72259") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "vermis lobus posterior") AnnotationAssertion(Annotation( "FMA:72259") "vermis of posterior lobe") AnnotationAssertion( "vermis of posterior lobe of cerebellum") AnnotationAssertion(Annotation( "NLXANAT:20081240") "vermis of the posterior lobe of the cerebellum") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:72259") "posterior lobe vermis") AnnotationAssertion( "UBERON:0004009") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "cerebellum posterior vermis") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (primary muscle spindle) AnnotationAssertion(Annotation( "MP:0000991") "The sensory organ in muscle; involved in the stretch reflex and sensitive to stretch velocity.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004010") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "primary muscle spindle") SubClassOf( ) # Class: (secondary muscle spindle) AnnotationAssertion(Annotation( "MP:0000994") "The sensory organ in muscle; involved in the stretch reflex and not sensitive to stretch velocity.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004011") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "secondary muscle spindle") SubClassOf( ) # Class: (golgi tendon organ) AnnotationAssertion(Annotation( "MP:0000999") "The sensory organ in muscle that is involved in regulating muscle tension.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37873") AnnotationAssertion( "FMA:83608") AnnotationAssertion( "NCIT:C13826") AnnotationAssertion(Annotation( "ncithesaurus:Golgi_Tendon_Organ") "UMLS:C0027929") AnnotationAssertion(Annotation( "FMA:83608") "neurotendinous ending") AnnotationAssertion(Annotation( "FMA:83608") "neurotendinous organ of golgi") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004012") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "golgi tendon organ") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (egg cylinder) AnnotationAssertion(Annotation( "MP:0003085") "The transient cup-like structure of the epiblast that consists of a single layer of embryonic cells.") AnnotationAssertion( "EMAPA:36119") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004013") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "egg cylinder") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (labium minora) AnnotationAssertion(Annotation( "MP:0003520") "One of the folds of skin which form the inner lips on both sides of the vaginal opening.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:20374") AnnotationAssertion( "MA:0002845") AnnotationAssertion( "NCIT:C12307") AnnotationAssertion(Annotation( "ncithesaurus:Labium_Minus") "UMLS:C0227766") AnnotationAssertion( "galen:LabiaMinora") AnnotationAssertion( "labia minorum") AnnotationAssertion( "labium minora") AnnotationAssertion(Annotation( "MA:0002845") "labium minorum") AnnotationAssertion(Annotation( "FMA:20374") "labium minus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "labium minus pudendi") AnnotationAssertion( "UBERON:0004014") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "labium minora") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/b/b7/Vulva_labeled_english.jpg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "Wikipedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (embryonic-extraembryonic boundary) AnnotationAssertion(Annotation( "MP:0003890") "The connection between the embryo proper and extraembryonic tissues.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004015") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "embryonic-extraembryonic boundary") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (dermatome) AnnotationAssertion(Annotation( "AEO:0001017") Annotation( "AEO:JB"^^xsd:string) "A transitional population of migrating mesenchymal cells that derive from somites and that will become dermal cells.") AnnotationAssertion( "Not to be confused with 'dermatome segment of skin'.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0011028") AnnotationAssertion( "AEO:0001017") AnnotationAssertion( "EHDAA2_RETIRED:0003428") AnnotationAssertion( "EHDAA:1719") AnnotationAssertion( "EHDAA:1725") AnnotationAssertion( "EHDAA:1731") AnnotationAssertion( "EHDAA:1737") AnnotationAssertion( "EMAPA:32838") AnnotationAssertion( "FMA:295656") AnnotationAssertion( "NCIT:C61572") AnnotationAssertion(Annotation( "ncithesaurus:Dermatome") "UMLS:C0180383") AnnotationAssertion( "XAO:0000220") AnnotationAssertion(Annotation( ) "cutis plate") AnnotationAssertion(Annotation( ) "dermatomal mesenchyme") AnnotationAssertion( "uberon") AnnotationAssertion( "epimere mesoderm") AnnotationAssertion(Annotation( ) Annotation( ) "mesenchyma dermatomiale") AnnotationAssertion( "UBERON:0004016") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "dermatome") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/f/f3/Gray64.png"^^xsd:anyURI) SubClassOf(Annotation( "AEO"^^xsd:string) ) SubClassOf(Annotation( "EHDAA2-abduced") ObjectSomeValuesFrom( )) DisjointClasses( ) # Class: (periocular mesenchyme) AnnotationAssertion(Annotation( ) Annotation( "MP:0004054") "The mesenchymal cells that give rise to the corneal endothelium, corneal stroma, sclera, iris stroma, ciliary muscle, ciliary stroma, and trabecular meshwork of the eye[MP].") AnnotationAssertion(Annotation( ) "Periocular mesenchyme (PM) is a mesencephalic neural crest derived cell population which as a result of an interaction with the retinal pigment epithelium forms the scleral cartilage of the avian eye") AnnotationAssertion(Annotation( "XAO"^^xsd:string) "Check XAO once it has a definition.") AnnotationAssertion( "XAO:0004089") AnnotationAssertion( "ZFA:0005572") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "XAO:0004089") "periocular mesenchyme") AnnotationAssertion( "UBERON:0004017") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "periocular mesenchyme") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "PMID:3709965") ObjectSomeValuesFrom( )) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (baroreceptor) AnnotationAssertion(Annotation( "MP:0004118") "The sensory nerve endings in the wall of the atria of the heart, vena cava, aortic arch and carotid sinus that are sensitive to changes in blood pressure.") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:36597") AnnotationAssertion( "FMA:85601") AnnotationAssertion( "MA:0003009") AnnotationAssertion( "MESH:D011311") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "baroceptor") AnnotationAssertion(Annotation( ) "pressoreceptor") AnnotationAssertion( "stretch receptor") AnnotationAssertion(Annotation( "MESH:A08.800.050.800.900.700") "vascular stretch receptor") AnnotationAssertion( "UBERON:0004019") AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "WP classifies as mechanoreceptor") AnnotationAssertion(rdfs:label "baroreceptor") AnnotationAssertion(rdfs:seeAlso "https://github.com/obophenotype/uberon/issues/510"^^xsd:anyURI) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete embryonic cilium) AnnotationAssertion(Annotation( "MP:0004131") "OBSOLETE: the earliest cilia of the mouse embryo found on the cells of the embryonic node.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004020") AnnotationAssertion(rdfs:comment "Made obsolete as cell components are out of scope") AnnotationAssertion(rdfs:label "obsolete embryonic cilium") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (germinal neuroepithelium) AnnotationAssertion(Annotation( ) Annotation( "MP:0004261") "The single layer of epithelial cells that lines the early neural tube and develops into the nervous system and into the neural crest cells.") AnnotationAssertion( "As the cells adjacent to the lumen continue to divide, the migrating cells form a second layer around the original neural tube. This layer becomes progressively thicker as more cells are added to it from the germinal neuroepithelium. This new layer is called the mantle (or intermediate) zone, and the germinal epithelium is now called the ventricular zone (and, later, the ependyma)[NCBIBook:NBK10047]") AnnotationAssertion(Annotation( ) "germinal neuroepithelial layer") AnnotationAssertion(Annotation( "NCBIBook:NBK10047") "germinal neuroepithelium") AnnotationAssertion(Annotation( "NCBIBook:NBK10047") "original neural tube") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004022") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "germinal neuroepithelium") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "NCBIBook:NBK10047") ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses( ) # Class: (ganglionic eminence) AnnotationAssertion(Annotation( "MP:0004274") "The transient proliferative population of neurons that expands exponentially during late prenatal development; it is a continuous germinal zone distinct from the ventricular zone that surrounds the brain ventricles[MP].") AnnotationAssertion( "contributes significantly in building up the GABAergic cortical cell population[WP]") AnnotationAssertion(Annotation( ) "GE") AnnotationAssertion(Annotation( "MP:0004274") Annotation( ) "SVZ") AnnotationAssertion(Annotation( ) "embryonic GE") AnnotationAssertion(Annotation( ) "embryonic SVZ") AnnotationAssertion(Annotation( "DHBA:SZ") "subventricular zone") AnnotationAssertion( ) AnnotationAssertion( "DHBA:10549") AnnotationAssertion( "EMAPA:32665") AnnotationAssertion( "PBA:128012818") AnnotationAssertion(Annotation( "MP:0004274") "embryonic subventricular zone") AnnotationAssertion( "embryonic/fetal subventricular zone") AnnotationAssertion( "fetal subventricular zone") AnnotationAssertion(Annotation( "MP:0004274") "subependymal layer") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004023") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "ganglionic eminence") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (medial ganglionic eminence) AnnotationAssertion(Annotation( "MP:0004276") "A distinct elevation of a transient proliferating cell mass of the fetal subventricular zone; this mass contributes most of its cells to the neocortex; however, hippocampal neurons, thalamus, septum and olfactory bulb neurons are also partly derived from the MGE.") AnnotationAssertion(Annotation( ) Annotation( ) "MGE") AnnotationAssertion( "DHBA:10550") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37471") AnnotationAssertion( "PBA:128012834") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004024") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "medial ganglionic eminence") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses(Annotation( "lexical"^^xsd:string) ) # Class: (lateral ganglionic eminence) AnnotationAssertion(Annotation( "MP:0004277") "A distinct elevation of a transient proliferating cell mass of the fetal subventricular zone; this mass contributes most of its cells to the striatum; however, neocortex, thalamus, septum and olfactory bulb neurons are also partly derived from the LGE.") AnnotationAssertion(Annotation( ) Annotation( ) "LGE") AnnotationAssertion( "DHBA:10551") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37470") AnnotationAssertion( "PBA:128012822") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004025") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "lateral ganglionic eminence") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (caudal ganglionic eminence) AnnotationAssertion(Annotation( "MP:0004278") "The caudally located, distinct elevation of a transient proliferating cell mass of the fetal subventricular zone, located adjacent to the lateral ventricle.") AnnotationAssertion( "CGE") AnnotationAssertion( "DHBA:10552") AnnotationAssertion( "EFO:0001911") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37469") AnnotationAssertion( "PBA:128012846") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004026") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "caudal ganglionic eminence") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (chorionic plate) AnnotationAssertion(Annotation( ) Annotation( "MP:0004560") "That portion of the chorionic wall in the region of its uterine attachment, which gives rise to chorionic villi; it consists of the mesoderm that lines the chorionic vesicle and, on the maternal side, of the trophoblast that lines the intervillous spaces; in the last half of gestation, the mesodermal connective tissue is largely replaced by fibrinoid material, and the amnionic membrane is adherent to the fetal side of the plate.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0002879") AnnotationAssertion( "EMAPA:31872") AnnotationAssertion( "NCIT:C34123") AnnotationAssertion(Annotation( "ncithesaurus:Chorionic_Plate") "UMLS:C0230972") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004027") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "chorionic plate") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (canal of Schlemm) AnnotationAssertion(Annotation( ) Annotation( "MP:0005204") "The vascular structure encircling the anterior chamber of the eye, through which the aqueous humor is returned to the blood circulation.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37456") AnnotationAssertion( "FMA:51873") AnnotationAssertion( "NCIT:C32256") AnnotationAssertion(Annotation( "ncithesaurus:Canal_of_Schlemm") "UMLS:C0229108") AnnotationAssertion( "ZFA:0005829") AnnotationAssertion( "Schlemm's canal") AnnotationAssertion(Annotation( "FMA:51873") "scleral sinus") AnnotationAssertion(Annotation( "FMA:51873") "scleral venous sinus") AnnotationAssertion(Annotation( "FMA:51873") "sinus venosus of sclera") AnnotationAssertion(Annotation( ) Annotation( ) "sinus venosus sclerae") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004029") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "canal of Schlemm") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA/obol"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (aqueous vein) AnnotationAssertion(Annotation( "MP:0005207") "A vessel that receives aqueous humor from the sinus venosus sclerae (canal of Schlemm).") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37428") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004030") AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "a mixture of episcleral venous blood and aqueous humor mix in this combined channel[http://www.atlasophthalmology.com]") AnnotationAssertion(rdfs:label "aqueous vein") AnnotationAssertion( "http://www.atlasophthalmology.com/media/Aqeous+Vein+Prep.m4v"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (head ectomesenchyme) AnnotationAssertion(Annotation( "MP:0006302") "Mesenchymal cells derived from neural crest cells that contribute to development of the hard and soft tissue in the head and neck, including the branchial arches[MP].") AnnotationAssertion( "consider merging with UBERON:0007213 mesenchyme derived from head neural crest") AnnotationAssertion(Annotation( ) "Ectomesenchyme has similar properties to mesenchyme. The major difference is that ectomesenchyme is usually considered to arise from neural crest cells, which are a critical group of cells that form in the cranial region during early vertebrate development. Thus, ectomesenchyme plays a critical role in the formation of the hard and soft tissues of the head and neck such as bones, muscles, teeth, and, most important, the branchial arches[Wikipedia:Ectomesenchyme].") AnnotationAssertion(Annotation( "ZFA:0005771") "Portion of tissue that develops from the cranial neural crest and which cells populate a series of pharyngeal arches from which develops the support skeleton of the jaw and gills[ZFA:0005771].") AnnotationAssertion( ) AnnotationAssertion( "FMA:318119") AnnotationAssertion(Annotation( "MP:0006302") "ectomesenchyme") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004031") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "head ectomesenchyme") SubClassOf(Annotation( "consider merging") ) # Class: (podocyte slit diaphragm) AnnotationAssertion(Annotation( "MP:0008060") "The thin membrane that covers the podocyte filtration slit which allows small molecules such as water, glucose, and ionic salts to pass through while retaining larger macromolecules in the bloodstream.") AnnotationAssertion( "TODO - submit to GO") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004032") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "podocyte slit diaphragm") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (podocyte slit junction) AnnotationAssertion(Annotation( "MP:0008062") "The gaps between the interdigitated foot processes of the podocyte.") AnnotationAssertion( "TODO - submit to GO") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004033") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "podocyte slit junction") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (cutaneous microfibril) AnnotationAssertion(Annotation( "MP:0008419") "The fiber-like strand of fibrillin that forms the scaffold of the cutaneous elastic fibers found in the extracellular matrix of the skin.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004034") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "cutaneous microfibril") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (cortical subplate) AnnotationAssertion(Annotation( ) Annotation( ) Annotation( "MP:0008440") "The transient outer neural tube region that contains the first generated post-mitotic neurons that receive synaptic input from thalamic axons and in turn project axons to the developing cortical plate.") AnnotationAssertion(Annotation( "WP"^^xsd:string) "The transient fetal subplate zone, together with the marginal zone and the cortical plate, represents the developmental anlage of the mammalian cerebral cortex. It serves as a waiting compartment for growing cortical afferents; its cells are involved in the establishment of pioneering cortical efferent projections and transient fetal circuitry, and apparently have a number of other developmental roles. The subplate zone is a phylogenetically recent structure and it is most developed in the human brain. Subplate neurons are among the first generated neurons in the mammalian cerebral cortex [1]. These neurons disappear during postnatal development and are important in establishing the correct wiring [2][3] and functional maturation [4] of the cerebral cortex. Subplate neurons appear to be selectively sensitive to injury (such as hypoxia) which in humans are associated with motor and cognitive defects") AnnotationAssertion(Annotation( "BRAINSPAN:BRAINSPAN") Annotation( ) "SP") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "DHBA:10522") AnnotationAssertion( "EMAPA:32703") AnnotationAssertion( "PBA:294021932") AnnotationAssertion(Annotation( "EMAPA:32833") "cerebral cortex subplate") AnnotationAssertion( "subplate") AnnotationAssertion(Annotation( "DHBA:10522") "subplate zone") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004035") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "cortical subplate") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete retinal cone cell inner segment) AnnotationAssertion(Annotation( "MP:0008448") "The retinal cone cell region which contains the machinery of the cell (mitochondria, golgi, endoplasmic reticulum, etc) and where opsin molecules are assembled and passed to be part of the outer segment region.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004036") AnnotationAssertion(rdfs:comment "request from GO as subclass of photoreceptor segment") AnnotationAssertion(rdfs:label "obsolete retinal cone cell inner segment") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete retinal cone cell outer segment) AnnotationAssertion(Annotation( "MP:0008449") "The retinal cone cell region in which the visual pigment rhodopsin is in invaginations of the cell membrane.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004037") AnnotationAssertion(rdfs:comment "request from GO as subclass of photoreceptor segment") AnnotationAssertion(rdfs:label "obsolete retinal cone cell outer segment") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete retinal rod cell inner segment) AnnotationAssertion(Annotation( "MP:0008455") "The retinal rod cell region which contains the machinery of the cell (mitochondria, golgi, endoplasmic reticulum, etc) and where opsin molecules are assembled and passed to be part of the outer segment region.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004038") AnnotationAssertion(rdfs:comment "request from GO as subclass of photoreceptor segment") AnnotationAssertion(rdfs:label "obsolete retinal rod cell inner segment") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete retinal rod cell outer segment) AnnotationAssertion(Annotation( "MP:0008456") "The retinal rod cell region which contains stacks of membranous discs separate from the outer cell membrane that are rich in the visual pigment rhodopsin.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004039") AnnotationAssertion(rdfs:comment "request from GO as subclass of photoreceptor segment") AnnotationAssertion(rdfs:label "obsolete retinal rod cell outer segment") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (cortical intermediate zone) AnnotationAssertion(Annotation( "MP:0008457") "The region of the developing mammalian cortex that extends between the ventricular zone and the cortical plate (CP); normally, the IZ is a region of tangential migration of cells, and at midgestation, the lower part of the IZ develops into the subventricular zone.") AnnotationAssertion(Annotation( "BRAINSPAN:BRAINSPAN") Annotation( ) "IZ") AnnotationAssertion( "EMAPA:17545") AnnotationAssertion( "EMAPA:32712") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "EMAPA:17545") "cerebral cortex mantle layer") AnnotationAssertion( "cerebral cortex mantle zone") AnnotationAssertion( "cortical mantle layer") AnnotationAssertion( "UBERON:0004040") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "cortical intermediate zone") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (spleen primary B follicle) AnnotationAssertion(Annotation( "MP:0008471") "The nodules of small undifferentiated B lymphocytes and follicular dendritic cells located in the spleen white pulp.") AnnotationAssertion(Annotation( "FMA"^^xsd:string) "FMA:15843 is classified as primary follicle so it belongs here") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37960") AnnotationAssertion( "FMA:15843") AnnotationAssertion(Annotation( "CL:tm") "primary spleen B cell follicle") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004041") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "spleen primary B follicle") SubClassOf( ) SubClassOf( ) # Class: (spleen secondary B follicle) AnnotationAssertion(Annotation( "MP:0008472") "The nodules of antigen-activated, differentiating B cells, follicular dendritic cells, antigen-presenting T cells and macrophages in the spleen white pulp.") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37961") AnnotationAssertion(Annotation( "CL:tm") "secondary spleen B cell follicle") AnnotationAssertion(Annotation( "MP:0008472") "splenic secondary B cell follicle") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004042") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "spleen secondary B follicle") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "CL:tm") ObjectSomeValuesFrom( )) # Class: (semicircular canal ampulla) AnnotationAssertion(Annotation( ) Annotation( "MP:0008488") "The spherical enlargement at the base of each semicircular canal where they connect with the utricle, containing the crista ampullaris which detects movement of the fluid within the canals.") AnnotationAssertion( "TODO check duct vs canal. Also check FMA - has many subtypes of semicircular canal such as 'ampulla of anterior semicircular canal'") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:32831") AnnotationAssertion( "MA:0002770") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "ampullae osseae") AnnotationAssertion(Annotation( "MP:0008488") "membraneous ampulla of the semicircular duct") AnnotationAssertion(Annotation( "MA:0002770") "semicircular duct ampulla") AnnotationAssertion( "UBERON:0004043") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "semicircular canal ampulla") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/6/65/Vestibular_system%27s_semicircular_canal-_a_cross-section.jpg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "MA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (anterior visceral endoderm) AnnotationAssertion(Annotation( "MP:0008533") "The extraembryonic tissue that is responsible for the proper orientation of the anterior-posterior axis of the embryo and for appropriate patterning of adjacent embryonic tissue.") AnnotationAssertion( "BTO:0003361") AnnotationAssertion( "EMAPA:36068") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0003361") "AVE") AnnotationAssertion( "UBERON:0004044") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "anterior visceral endoderm") AnnotationAssertion(rdfs:seeAlso ) SubClassOf( ) # Class: (anterior definitive endoderm) AnnotationAssertion(Annotation( "MP:0008926") "The mesendoderm which first migrates from the node and which gives rise to the gut.") AnnotationAssertion( "TODO - check") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004046") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "anterior definitive endoderm") SubClassOf( ) # Class: (basal cistern) AnnotationAssertion(Annotation( "MP:0009029") "The enclosed space where the arachnoid membrane stretches between the two temporal lobes and encloses the cerebral peduncles including the structures contained in the interpeduncular fossa.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:IPCi") AnnotationAssertion( "BAMS:icis") AnnotationAssertion( "EMAPA:19056") AnnotationAssertion( "FMA:83718") AnnotationAssertion( "NCIT:C32866") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "EMAPA:19056") "cisterna interpeduncularis") AnnotationAssertion(Annotation( "EMAPA:19149") "cisterna interpeduncularis") AnnotationAssertion(Annotation( "EMAPA:19056") Annotation( "FMA:83718") "interpeduncular cistern") AnnotationAssertion(Annotation( "EMAPA:19149") "interpeduncular cistern") AnnotationAssertion( "UBERON:0004047") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "basal cistern") SubClassOf( ) # Class: (pontine cistern) AnnotationAssertion(Annotation( "MP:0009030") "The space located on lateral aspects of the pons at the junction with the celebellum.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:PoCi") AnnotationAssertion( "BAMS:pcis") AnnotationAssertion( "EMAPA:18212") AnnotationAssertion( "FMA:83719") AnnotationAssertion(Annotation( "FMA:83719") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "cisterna pontis") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004048") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "pontine cistern") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (cerebellomedullary cistern) AnnotationAssertion(Annotation( ) "The largest of the subarachnoid cisterns between the cerebellum and the medulla oblongata; it is divided into a posterior cerebellomedullary cistern located between the cerebellum and the posterior surface of the medulla (also called cisterna magna), and a lateral cerebellomedullary cistern located between the cerebellum and the lateral aspect of the medulla.") AnnotationAssertion( ) AnnotationAssertion( "BAMS:GrCi") AnnotationAssertion( "BAMS:cmcis") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37814") AnnotationAssertion( "FMA:74517") AnnotationAssertion(Annotation( "FMA:74517") "great cistern") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004049") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "cerebellomedullary cistern") SubClassOf( ) # Class: (subarachnoid cistern) AnnotationAssertion(Annotation( ) Annotation( "MP:0009032") "The widening portions of the subarachnoid space within the cranium where the arachnoid bridges over a depression on the surface of the brain.") AnnotationAssertion(Annotation( "FMA"^^xsd:string) "in FMA is a subdivision of arachnoid space") AnnotationAssertion(Annotation( ) "cistern") AnnotationAssertion(Annotation( ) Annotation( ) "cisterna") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:Ci") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37813") AnnotationAssertion( "FMA:83717") AnnotationAssertion( "NCIT:C33640") AnnotationAssertion(Annotation( "ncithesaurus:Subarachnoid_Cistern") "UMLS:C0228144") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004050") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "subarachnoid cistern") SubClassOf( ) # Class: (lateral cerebellomedullary cistern) AnnotationAssertion(Annotation( "MP:0009034") "The space between the cerebellum and the lateral aspect of the medulla.") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37815") AnnotationAssertion( "FMA:83722") AnnotationAssertion(Annotation( "MP:0009034") "cisterna cerebellomedullaris lateralis") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004051") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "lateral cerebellomedullary cistern") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (quadrigeminal cistern) AnnotationAssertion(Annotation( "MP:0009035") "The enclosed space extending forward between the corpus callosum and the thalamus that contains the internal cerebral veins.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:scis") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37817") AnnotationAssertion( "FMA:74511") AnnotationAssertion( "NCIT:C33444") AnnotationAssertion(Annotation( "ncithesaurus:Quadrigeminal_Cistern") "UMLS:C0228150") AnnotationAssertion(Annotation( "FMA:74511") "ambient cistern") AnnotationAssertion(Annotation( "FMA:74511") "cistern of great cerebral vein") AnnotationAssertion(Annotation( "FMA:74511") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "cisterna ambiens") AnnotationAssertion(Annotation( "FMA:74511") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "cisterna quadrigeminalis") AnnotationAssertion(Annotation( "FMA:74511") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "cisterna venae magnae cerebri") AnnotationAssertion(Annotation( "FMA:74511") "superior cistern") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004052") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "quadrigeminal cistern") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (external male genitalia) AnnotationAssertion(Annotation( "MP:0009199") "The external masculine genital organs, including the penis and scrotum.") AnnotationAssertion( ) AnnotationAssertion( "BTO:0003097") AnnotationAssertion( "EMAPA:30977") AnnotationAssertion( "FMA:45642") AnnotationAssertion( "galen:MaleExternalGenitalia") AnnotationAssertion(Annotation( "BTO:0003097") "external male genital organ") AnnotationAssertion(Annotation( "FMA:45642") "male external genitalia") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0003097") "organa genitalia masculina externa") AnnotationAssertion( "UBERON:0004053") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "TODO: Relabel. Make distinct organ class. See https://github.com/obophenotype/uberon/issues/547") AnnotationAssertion(rdfs:label "external male genitalia") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses( ) DisjointClasses( ) # Class: (internal male genitalia) AnnotationAssertion(Annotation( "MP:0009205") "The internal masculine genital organs, including the testes, epididymides, deferent ducts, seminal vesicles, prostate, ejaculatory ducts, and bulbourethral glands.") AnnotationAssertion( "consider splitting genitalia from genital organ") AnnotationAssertion( ) AnnotationAssertion( "BTO:0003096") AnnotationAssertion( "FMA:45655") AnnotationAssertion(Annotation( "BTO:0003096") "internal male genital organ") AnnotationAssertion(Annotation( "FMA:45655") "male internal genitalia") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0003096") "organa genitalia masculina interna") AnnotationAssertion( "UBERON:0004054") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "TODO: Relabel. Make distinct organ class. See https://github.com/obophenotype/uberon/issues/547") AnnotationAssertion(rdfs:label "internal male genitalia") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (primitive pit) AnnotationAssertion(Annotation( ) Annotation( "MP:0009329") "The small depression in the primitive streak that is caudal to the primitive node where the cells of the epiblast initially begin to invaginate during early embryogenesis.") AnnotationAssertion( "TODO - check") AnnotationAssertion(Annotation( ) "The primitive pit is a depression in the center of the primitive node, connecting to the notochord. It consists of part of the primitive streak[Wikipedia:Primitive_pit].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0001521") AnnotationAssertion( "EHDAA:551") AnnotationAssertion( "FMA:293120") AnnotationAssertion( "NCIT:C34267") AnnotationAssertion(Annotation( "ncithesaurus:Primitive_Pit") "UMLS:C1514439") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004055") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "primitive pit") SubClassOf(Annotation( "EHDAA2"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (primitive groove) AnnotationAssertion(Annotation( ) Annotation( "MP:0009330") "The shallow valley that extends along the length of the primitive streak[MP].") AnnotationAssertion(Annotation( ) "A shallow groove, the primitive groove, appears on the surface of the primitive streak, and the anterior end of this groove communicates by means of an aperture, the blastophore, with the yolk-sac[Wikipedia:Primitive_groove].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0001511") AnnotationAssertion( "EHDAA:547") AnnotationAssertion( "FMA:293118") AnnotationAssertion( "NCIT:C34265") AnnotationAssertion(Annotation( "ncithesaurus:Primitive_Groove") "UMLS:C1514434") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004056") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "primitive groove") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (skeletal muscle fiber triad) AnnotationAssertion(Annotation( "MP:0009411") "The skeletal muscle fiber structure comprised of the transverse tubule and the two associated terminal cisternae; each fiber normally has thousands of triads.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004057") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "skeletal muscle fiber triad") SubClassOf( ) # Class: (biliary ductule) AnnotationAssertion(Annotation( "BTO:0002840") Annotation( "MP:0009494") "One of the fine terminal elements of the bile duct system, leaving the portal canal, and pursuing a course at the periphery of a lobule of the liver[BTO]. the excretory ducts of the liver that connect the interlobular ductules to the right or left hepatic duct[MP].") AnnotationAssertion(Annotation( "ZFA"^^xsd:string) "In ZFA, Digestive system duct that collects bile from the canaliculus and transports bile through the liver -- (check if the same) // The smallest and the most peripheral branches of the biliary tree consist of a portal part (portal ductule) and an intralobular part (intralobular ductule)") AnnotationAssertion( "BTO:0002840") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37440") AnnotationAssertion( "TAO:0005164") AnnotationAssertion( "ZFA:0005164") AnnotationAssertion(Annotation( "BTO:0002840") "bile ductule") AnnotationAssertion(Annotation( ) "biliary ductule") AnnotationAssertion(Annotation( ) "ductuli biliferi") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0002840") "bile capillary") AnnotationAssertion(Annotation( "BTO:0002840") "biliary ductule") AnnotationAssertion(Annotation( "BTO:0002840") "cholangiole") AnnotationAssertion(Annotation( ) "terminal cholangiole") AnnotationAssertion( "UBERON:0004058") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "biliary ductule") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "BTO"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (spinal cord medial motor column) AnnotationAssertion(Annotation( "MP:0009686") "The subclasses of motor neurons which project their axons to axial muscles that lie close to the vertebral column; motor neurons in the lateral subdivision of the MMC project their axons to body wall muscles.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004059") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "spinal cord medial motor column") SubClassOf( ) # Class: (neural tube ventricular layer) AnnotationAssertion(Annotation( ) Annotation( "MP:0009689") "The layer of undifferentiated, proliferating cells that line the neural tube lumen that is the immediate transformation of the germinal neuroepithelium.") AnnotationAssertion( "consider merging with 'ventricular zone'; note that the MA class probably does not belong here, as this is an embryonic structure") AnnotationAssertion(Annotation( "MP:0009689") "The layer of undifferentiated, proliferating cells that line the neural tube lumen") AnnotationAssertion(Annotation( "NCBIBook:NBK10047") "ependymal layer") AnnotationAssertion( "EMAPA:17152") AnnotationAssertion( "EMAPA:35362") AnnotationAssertion( "EMAPA_RETIRED:16783") AnnotationAssertion( "MA:0003193") AnnotationAssertion(Annotation( "NCBIBook:NBK10047") "neural tube ependymal layer") AnnotationAssertion(Annotation( "NCBIBook:NBK10047") "neural tube ventricular germinal zone") AnnotationAssertion(Annotation( "MP:0009689") "neural tube ventricular zone") AnnotationAssertion(Annotation( "MP:0009689") "neural tube ependymal zone") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004060") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "neural tube ventricular layer") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "NCBIBook:NBK10047") ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "NCBIBook:NBK10047") ObjectSomeValuesFrom( )) # Class: (neural tube mantle layer) AnnotationAssertion(Annotation( ) Annotation( "MP:0009690") "The layer of glia and differentiating neurons that forms as a second layer around the germinal neuroepithium; as this develops it comes to lie between the ventricular and marginal layers and includes the basal and alar plates. Develops into neurons and glia forming a gray matter layer.") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:17148") AnnotationAssertion( "EMAPA:35360") AnnotationAssertion(Annotation( ) Annotation( "MP:0009690") "neural tube intermediate zone") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "EMAPA:35360") "future brain marginal layer") AnnotationAssertion( "UBERON:0004061") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "neural tube mantle layer") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "NCBIBook:NBK10047") ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "by division") Annotation( "NCBIBook:NBK10047") ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (neural tube marginal layer) AnnotationAssertion(Annotation( ) Annotation( "MP:0009691") "The outermost layer of the neural tube that consists of axons from the developing mantle layer and will form the white matter.") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:17151") AnnotationAssertion(Annotation( "MP:0009691") "neural tube marginal zone") AnnotationAssertion( "uberon") AnnotationAssertion( "brain marginal zone") AnnotationAssertion( "UBERON:0004062") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "neural tube marginal layer") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "forms from axons") ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (spinal cord alar plate) AnnotationAssertion(Annotation( "MP:0009692") "The region of the mantle layer of the neural tube that lies dorsal to the sulcus limitans and contains primarily sensory neurons and interneurons involved in communication of sensory impulses; the alar plate develops into the dorsal horn in the grey matter of the spinal cord.") AnnotationAssertion( "TODO - merge with UBERON:0003054 roof plate?") AnnotationAssertion( "EMAPA:17149") AnnotationAssertion( "EMAPA:17581") AnnotationAssertion( "VHOG:0000899") AnnotationAssertion(Annotation( "VHOG:0000899") "alar column spinal cord") AnnotationAssertion(Annotation( "MP:0009692") "spinal cord alar column") AnnotationAssertion(Annotation( "MP:0009692") "spinal cord alar lamina") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004063") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "spinal cord alar plate") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (neural tube basal plate) AnnotationAssertion(Annotation( ) Annotation( ) Annotation( "MP:0009693") "The region of the mantle layer of the neural tube that lies ventral to the sulcus limitans and contains primarily motor neurons and interneurons.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010561") AnnotationAssertion( "EFO:0001904") AnnotationAssertion( "NCIT:C34111") AnnotationAssertion(Annotation( "ncithesaurus:Basal_Plate") "UMLS:C1511061") AnnotationAssertion( "basal plate") AnnotationAssertion(Annotation( ) "basal plate of neural tube") AnnotationAssertion(Annotation( "MP:0009693") "spinal cord basal plate") AnnotationAssertion( "uberon") AnnotationAssertion( "motor part of neural tube") AnnotationAssertion( "ventral part of neural tube") AnnotationAssertion( "UBERON:0004064") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "neural tube basal plate") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "Shh") Annotation( "Swenson") ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (frontonasal prominence) AnnotationAssertion(Annotation( "MP:0009901") "The unpaired embryonic prominence that is formed by the tissues surrounding the forebrain vesicle and develops into the forehead and bridge of the nose/snout.") AnnotationAssertion( "UBERON:0006237") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0000578") AnnotationAssertion( "EHDAA:4778") AnnotationAssertion( "EMAPA:16681") AnnotationAssertion( "FMA:293101") AnnotationAssertion( "NCIT:C34182") AnnotationAssertion(Annotation( "ncithesaurus:Frontonasal_Prominence") "UMLS:C1517321") AnnotationAssertion( "VHOG:0001319") AnnotationAssertion(Annotation( ) "embryonic frontonasal prominence") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "MP:0009901") "forebrain prominence") AnnotationAssertion(Annotation( "MP:0009901") "frontonasal mass") AnnotationAssertion(Annotation( "MP:0009901") "frontonasal process") AnnotationAssertion(Annotation( ) Annotation( ) "prominentia frontonasalis") AnnotationAssertion( "UBERON:0004066") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "frontonasal prominence") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/9/98/Gray44.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lateral nasal prominence) AnnotationAssertion(Annotation( ) Annotation( "MP:0009902") "The lateral area of the two branches of a horseshoe-shaped mesenchymal swelling in the future nasal region of the embryo; it separates the olfactory pit from the developing eye and the ala of the nose/snout develops from it.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0000916") AnnotationAssertion( "EHDAA:4786") AnnotationAssertion( "EMAPA:16805") AnnotationAssertion( "FMA:295864") AnnotationAssertion(Annotation( "EHDAA2:0000916") "lateral nasal process") AnnotationAssertion(Annotation( "EMAPA:16805") "latero-nasal process") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "lateral nasal swelling") AnnotationAssertion(Annotation( ) Annotation( ) "prominentia nasalis lateralis") AnnotationAssertion( "UBERON:0004067") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "lateral nasal prominence") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/2/2d/Gray48.png"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "Wikipedia"^^xsd:string) ObjectSomeValuesFrom( )) DisjointClasses(Annotation( "lexical"^^xsd:string) ) # Class: (medial nasal prominence) AnnotationAssertion(Annotation( ) Annotation( "MP:0009903") "The central area of the two limbs of a horseshoe-shaped mesenchymal swelling that lie medial to the olfactory placode or pit in the future nasal region of the embryo; it joins with the ipsilateral maxillary prominence in the formation of half of the upper jaw, and the nasal tip and philtrum of the upper lip develop from it.") AnnotationAssertion( "Fusion of right and left medial nasal processes forms a primary palate rostrally and the nasal septum caudally. The incisive bone, including upper incisor teeth and the rostral up- per lip, are derived from the primary palate. The nasal septum consists of bone, cartilage, and a patch of soft tissue membrane that separates right & left halves of the nasal cavity.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0001076") AnnotationAssertion( "EHDAA:4792") AnnotationAssertion( "EMAPA:16808") AnnotationAssertion( "FMA:295858") AnnotationAssertion( "VHOG:0000804") AnnotationAssertion(Annotation( "EHDAA2:0001076") "medial nasal process") AnnotationAssertion(Annotation( "EMAPA:16808") "medial-nasal process") AnnotationAssertion(Annotation( ) Annotation( ) "prominentia nasalis medialis") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "medial nasal swelling") AnnotationAssertion(Annotation( ) "nasomedial prominence") AnnotationAssertion( "UBERON:0004068") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "medial nasal prominence") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/8/85/Gray45.png"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "Wikipedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (accessory olfactory bulb) AnnotationAssertion(Annotation( ) Annotation( "MP:0009945") "The forebrain region that coordinates sensory signaling arising from the vomeronasal organ; it is located on the dorsal-posterior portion of the main olfactory bulb, and the axons that leave the accessory olfactory bulb project to targets in the amygdala and hypothalamus.") AnnotationAssertion(Annotation( "NIF"^^xsd:string) "NLXANAT:20090453 appears to be retired") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:AOB") AnnotationAssertion( "BAMS:AOLB") AnnotationAssertion( "BTO:0004797") AnnotationAssertion( "DMBA:15957") AnnotationAssertion( "EMAPA:35106") AnnotationAssertion( "MA:0000966") AnnotationAssertion( "MBA:151") AnnotationAssertion( "NLX:53") AnnotationAssertion( "NLXANAT:20090453") AnnotationAssertion( "accessory (vomeronasal) bulb") AnnotationAssertion(Annotation( "NLXANAT:20090453") "olfactory bulb accessory nucleus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "MA:0000966") "accessory olfactory formation") AnnotationAssertion( "UBERON:0004069") AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "Projection notes: Site of termination of vomeronasal nerve; projects to: other parts of pallial amygdala, medial amygdala, subpallial nucleus (Butler and Hodos)") AnnotationAssertion(rdfs:label "accessory olfactory bulb") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "cjm"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "ISBN:0471888893"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (cerebellum vermis lobule) AnnotationAssertion(Annotation( "MP:0009957") "The region of a cerebellar lobule that resides in the central section of the cerebellum between the two hemispheres.") AnnotationAssertion( "TODO - define as a region overlapping") AnnotationAssertion( "in humans, vermis lobule regions may be nearly continuous with the cerebellar hemisphere lobules dorsally but are separated by deeper longitudinal fissues in the ventral regions; in mammals, the vermis portion of the cerebellum has a foliation pattern along the AP axis that is distinct from the lateral cerebellar hemispheres") AnnotationAssertion( "EMAPA:35224") AnnotationAssertion( "FMA:278629") AnnotationAssertion( "MA:0002968") AnnotationAssertion( "NLXANAT:20081223") AnnotationAssertion(Annotation( "FMA:278629") "lobule of vermis") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004070") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "cerebellum vermis lobule") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (cerebellum interpositus nucleus) AnnotationAssertion(Annotation( "MP:0009984") "The nucleus composed of the globose and emoliform nuclei of the cerebellum; in some mammalian species the globose nucleus is not distinguishable.") AnnotationAssertion(Annotation( "ISBN:0471888893"^^xsd:string) ) AnnotationAssertion(Annotation( ) "The interposed nucleus is a deep nucleus of the cerebellum and is composed of the globose nuclei and the emboliform nuclei. It is located in in the roof (dorsal aspect) of the fourth ventricle, lateral to the fastigial nucleus. It receives its afferent supply from the anterior lobe of the cerebellum and sends output via the superior cerebellar peduncle to the red nucleus.") AnnotationAssertion( "modulates muscle stretch reflexes of proximal limb muscles[WP]") AnnotationAssertion( "UBERON:0019281") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "DHBA:12399") AnnotationAssertion( "DHBA:12613") AnnotationAssertion( "DMBA:16929") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37819") AnnotationAssertion( "HBA:9578") AnnotationAssertion( "NLXANAT:20081242") AnnotationAssertion( "interposed nucleus of cerebellum") AnnotationAssertion(Annotation( "NeuroNames:1243") "interposed nucleus of the cerebellum") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "interposed nucleus") AnnotationAssertion(Annotation( "NLXANAT:20081242") "interposed nucleus of the cerebellum") AnnotationAssertion(Annotation( ) "interpositus") AnnotationAssertion(Annotation( ) "interpositus nucleus") AnnotationAssertion( "UBERON:0004073") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "cerebellum interpositus nucleus") SubClassOf( ) # Class: (cerebellum vermis lobule I) AnnotationAssertion( "TODO FMA:61904 lingual gyrus FMA:71032 lingula gyrus (lg)") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:LING") AnnotationAssertion( "BAMS:Lg") AnnotationAssertion( "BIRNLEX:932") AnnotationAssertion( "EMAPA:35225") AnnotationAssertion( "FMA:83884") AnnotationAssertion( "MA:0000998") AnnotationAssertion( "MBA:912") AnnotationAssertion( "NLXANAT:20081224") AnnotationAssertion(Annotation( "ABA:LING") "lingula (I)") AnnotationAssertion( "lingula of anterior cerebellum vermis") AnnotationAssertion( "lingula of cerebellum") AnnotationAssertion( "lobule I of cerebellum vermis") AnnotationAssertion( "neuraxis lingula") AnnotationAssertion(Annotation( "NLXANAT:20081224") "vermic lobule I") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "MA:0000998") "lingula") AnnotationAssertion(Annotation( "BAMS:LING") "lingula (I)") AnnotationAssertion(Annotation( "BAMS:LING") "lingula (l)") AnnotationAssertion(Annotation( "FMA:83884") "lingula of vermis") AnnotationAssertion(Annotation( "FMA:83884") "lobule I of vermis") AnnotationAssertion( "UBERON:0004074") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "cerebellum vermis lobule I") SubClassOf(Annotation( "MA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (cerebellum vermis lobule II) AnnotationAssertion(Annotation( "ABA") "central vs alar central? II and III? part_of CENT in ABA") AnnotationAssertion(Annotation( "MA:0000999") "central lobule") AnnotationAssertion( "central lobule of cerebellum") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:35226") AnnotationAssertion( "FMA:278635") AnnotationAssertion( "MA:0000999") AnnotationAssertion( "MBA:976") AnnotationAssertion( "NLXANAT:20081225") AnnotationAssertion(Annotation( "ABA:CENT2") "lobule II") AnnotationAssertion( "lobule II of cerebellum vermis") AnnotationAssertion(Annotation( "NLXANAT:20081225") "vermic lobule II") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004075") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "cerebellum vermis lobule II") SubClassOf(Annotation( "MA"^^xsd:string) ) SubClassOf(Annotation( "ABA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (cerebellum vermis lobule III) AnnotationAssertion( "II or III?") AnnotationAssertion(Annotation( "MA:0001000") "central lobule") AnnotationAssertion( "central lobule of cerebellum") AnnotationAssertion( ) AnnotationAssertion( "DHBA:12841") AnnotationAssertion( "EMAPA:35227") AnnotationAssertion( "FMA:278639") AnnotationAssertion( "HBA:12933") AnnotationAssertion( "MA:0001000") AnnotationAssertion( "MBA:984") AnnotationAssertion( "NLXANAT:20081226") AnnotationAssertion(Annotation( "ABA:CENT3") "lobule III") AnnotationAssertion( "lobule III of cerebellum vermis") AnnotationAssertion(Annotation( "NLXANAT:20081226") "vermic lobule III") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004076") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "cerebellum vermis lobule III") SubClassOf(Annotation( "MA"^^xsd:string) ) SubClassOf(Annotation( "ABA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (cerebellum vermis lobule IV) AnnotationAssertion( "culmen of cerebellum") AnnotationAssertion(Annotation( "FMA:83886") "neuraxis culmen") AnnotationAssertion( ) AnnotationAssertion( "DHBA:12842") AnnotationAssertion( "EMAPA:35228") AnnotationAssertion( "HBA:12934") AnnotationAssertion( "MA:0001001") AnnotationAssertion( "MBA:992") AnnotationAssertion( "NLXANAT:20081227") AnnotationAssertion( "lobule IV of cerebellum vermis") AnnotationAssertion(Annotation( "NLXANAT:20081227") "vermic lobule IV") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004077") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "cerebellum vermis lobule IV") SubClassOf(Annotation( "MA"^^xsd:string) ) SubClassOf(Annotation( "ABA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (cerebellum vermis lobule IX) AnnotationAssertion(Annotation( ) "The uvula (uvular lobe) forms a considerable portion of the inferior vermis; it is separated on either side from the tonsil by the sulcus valleculC&, at the bottom of which it is connected to the tonsil by a ridge of gray matter, indented on its surface by shallow furrows, and hence called the furrowed band.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:UVU") AnnotationAssertion( "BAMS:Uvu") AnnotationAssertion( "DHBA:12851") AnnotationAssertion( "EMAPA:35229") AnnotationAssertion( "FMA:83883") AnnotationAssertion( "HBA:12943") AnnotationAssertion( "MA:0001006") AnnotationAssertion( "MBA:957") AnnotationAssertion( "NLXANAT:20081234") AnnotationAssertion(Annotation( ) "cerebellar posterior vermis lobule IX") AnnotationAssertion(Annotation( ) "lobule IX of cerebellar posterior vermis") AnnotationAssertion( "lobule IX of cerebellum vermis") AnnotationAssertion(Annotation( "FMA:83883") "neuraxis uvula") AnnotationAssertion(Annotation( "ABA:UVU") "uvula (IX)") AnnotationAssertion( "uvula [vermis]") AnnotationAssertion(Annotation( "FMA:83883") "uvula of cerebellum") AnnotationAssertion( "uvula of vermis of cerebellum") AnnotationAssertion(Annotation( "NLXANAT:20081234") "vermic lobule IX") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:83883") "lobule IX of vermis") AnnotationAssertion(Annotation( "BAMS:Uvu") "uvula cerebellum") AnnotationAssertion( "UBERON:0004078") AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "The uvula is the second largest lobule, following the culmen. It pertains to the paleocerebellum and is separated from the nodule by the posterolateral fissure.") AnnotationAssertion(rdfs:label "cerebellum vermis lobule IX") SubClassOf(Annotation( "MA"^^xsd:string) ) SubClassOf(Annotation( "NIFSTD"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (cerebellum vermis lobule V) AnnotationAssertion(Annotation( "MA:0001002") "culmen") AnnotationAssertion( "culmen of cerebellum") AnnotationAssertion(Annotation( "FMA:83886") "neuraxis culmen") AnnotationAssertion( ) AnnotationAssertion( "BAMS:CUL") AnnotationAssertion( "BAMS:Cul") AnnotationAssertion( "DHBA:12843") AnnotationAssertion( "EMAPA:35230") AnnotationAssertion( "HBA:12935") AnnotationAssertion( "MA:0001002") AnnotationAssertion( "MBA:1001") AnnotationAssertion( "NLXANAT:20081228") AnnotationAssertion(Annotation( "ABA:CUL5") "lobule V") AnnotationAssertion(Annotation( "DHBA:CbV") "lobule V (culmen and quadrangular lobule, posterior part)") AnnotationAssertion( "lobule V of cerebellum vermis") AnnotationAssertion(Annotation( "NLXANAT:20081228") "vermic lobule V") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004079") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "cerebellum vermis lobule V") SubClassOf(Annotation( "MA"^^xsd:string) ) SubClassOf(Annotation( "ABA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (cerebellum vermis lobule VI) AnnotationAssertion( "UBERON:0000909") AnnotationAssertion( "UBERON:Declive-MA_0001003") AnnotationAssertion(Annotation( "MA:0001003") "declive") AnnotationAssertion(Annotation( "MP:0009994") "declive lobule") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:DEC") AnnotationAssertion( "DHBA:12845") AnnotationAssertion( "EMAPA:35231") AnnotationAssertion( "FMA:83887") AnnotationAssertion( "HBA:12937") AnnotationAssertion( "MA:0001003") AnnotationAssertion( "MBA:936") AnnotationAssertion( "NLXANAT:20081229") AnnotationAssertion(Annotation( "ABA:DEC") "declive (VI)") AnnotationAssertion( "declive of cerebellum") AnnotationAssertion( "declive of vermis of cerebellum") AnnotationAssertion(Annotation( "DHBA:CbVI") "lobule VI (declive and simplex lobule)") AnnotationAssertion( "lobule VI of cerebellum vermis") AnnotationAssertion(Annotation( "FMA:83887") "neuraxis declive") AnnotationAssertion(Annotation( "NLXANAT:20081229") "vermic lobule vi") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:83887") "declive of vermis") AnnotationAssertion(Annotation( "FMA:83887") "lobule VI of vermis") AnnotationAssertion( "UBERON:0004080") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "cerebellum vermis lobule VI") SubClassOf(Annotation( "MA"^^xsd:string) ) SubClassOf(Annotation( "MP"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (cerebellum vermis lobule VII) AnnotationAssertion( "comment: In rodents, vermis lobule VII is a single structure. In humans, it is cleft by the horizontal fissure into distinct folium (VIIa) and tuber (VIIb) lobules.[MP]") AnnotationAssertion(Annotation( "MA"^^xsd:string) "check MA, MP, FMA, folium? may need to form a separate class") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:FOTU") AnnotationAssertion( "EMAPA:35232") AnnotationAssertion( "FMA:278651") AnnotationAssertion( "MA:0001004") AnnotationAssertion( "MBA:944") AnnotationAssertion( "NLXANAT:20081230") AnnotationAssertion(Annotation( "ABA:FOTU") "folium-tuber vermis (VII)") AnnotationAssertion( "lobule VII of cerebellum vermis") AnnotationAssertion(Annotation( "NLXANAT:20081230") "vermic lobule VII") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:83889") "lobule VIIA of vermis") AnnotationAssertion( "UBERON:0004081") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "cerebellum vermis lobule VII") SubClassOf(Annotation( "MA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (cerebellum vermis lobule VIII) AnnotationAssertion( "UBERON:0002312") AnnotationAssertion(Annotation( "MA:0001005") "pyramus") AnnotationAssertion( ) AnnotationAssertion( "BAMS:PYR") AnnotationAssertion( "EMAPA:35233") AnnotationAssertion( "FMA:83888") AnnotationAssertion( "MA:0001005") AnnotationAssertion( "MBA:951") AnnotationAssertion( "NLXANAT:20081233") AnnotationAssertion( "cerebellum lobule VIII") AnnotationAssertion( "lobule VIII of cerebellum vermis") AnnotationAssertion( "neuraxis pyramis") AnnotationAssertion( "neuraxis pyramus") AnnotationAssertion(Annotation( "NLXANAT:20081233") "pyramis") AnnotationAssertion(Annotation( "FMA:83888") "pyramis of vermis of cerebellum") AnnotationAssertion(Annotation( "ABA:PYR") "pyramus (VIII)") AnnotationAssertion( "pyramus of cerebellum") AnnotationAssertion(Annotation( "FMA:83888") "pyramus of vermis of cerebellum") AnnotationAssertion(Annotation( "NLXANAT:20081233") "vermic lobule VIII") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:83888") "lobule VIII of vermis") AnnotationAssertion( "pyramus") AnnotationAssertion( "UBERON:0004082") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "cerebellum vermis lobule VIII") SubClassOf(Annotation( "MA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (cerebellum vermis lobule X) AnnotationAssertion(Annotation( "NeuroNames:681") "nodule") AnnotationAssertion(Annotation( ) Annotation( "MA:0001007") "nodulus") AnnotationAssertion( ) AnnotationAssertion( "BAMS:NOD") AnnotationAssertion( "BIRNLEX:1165") AnnotationAssertion( "EMAPA:35234") AnnotationAssertion( "FMA:83882") AnnotationAssertion( "HBA:4713") AnnotationAssertion( "MA:0001007") AnnotationAssertion( "MBA:968") AnnotationAssertion( "NLXANAT:20081235") AnnotationAssertion( "lobule X of cerebellum vermis") AnnotationAssertion(Annotation( "UBERON:cjm"^^xsd:string) "neuraxis nodule") AnnotationAssertion( "neuraxis nodulus") AnnotationAssertion(Annotation( "ABA:NOD") "nodulus (X)") AnnotationAssertion( "nodulus of cerebellum") AnnotationAssertion( "nodulus of vermis of cerebellum") AnnotationAssertion(Annotation( "NLXANAT:20081235") "vermic lobule X") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:83882") "lobule X of vermis of cerebellum") AnnotationAssertion(Annotation( "NLXANAT:20081235") "nodulus") AnnotationAssertion( "UBERON:0004083") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "cerebellum vermis lobule X") SubClassOf(Annotation( "MA"^^xsd:string) ) SubClassOf(Annotation( "NIFSTD"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (genital labium) AnnotationAssertion(Annotation( "MP:0003511") "One of the folds of skin which form the inner lips (labia minora) and outer lips (labia majora) on both sides of the vaginal opening.") AnnotationAssertion( "labial") AnnotationAssertion( ) AnnotationAssertion( "CALOHA:TS-2210") AnnotationAssertion( "EMAPA:30837") AnnotationAssertion( "FMA:321903") AnnotationAssertion( "MA:0002464") AnnotationAssertion( "NCIT:C52559") AnnotationAssertion(Annotation( "ncithesaurus:Labium") "UMLS:C0227759") AnnotationAssertion( "galen:Labia") AnnotationAssertion(Annotation( ) "genital labia") AnnotationAssertion(Annotation( ) "labia") AnnotationAssertion(Annotation( "MA:0002464") "labium") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004084") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "genital labium") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "MA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA-abduced-lr"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (labium majora) AnnotationAssertion(Annotation( "MP:0003515") "One of the folds of skin which form the outer lips on both sides of the vaginal opening.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:20367") AnnotationAssertion( "MA:0002844") AnnotationAssertion( "NCIT:C12306") AnnotationAssertion(Annotation( "ncithesaurus:Labium_Majus") "UMLS:C0227760") AnnotationAssertion( "galen:LabiaMajora") AnnotationAssertion( "labia majorum") AnnotationAssertion( "labium majora") AnnotationAssertion(Annotation( "MA:0002844") "labium majorum") AnnotationAssertion( "labium majus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "labium majus pudendi") AnnotationAssertion( "UBERON:0004085") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "labium majora") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/2/26/Gray1229.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "posterior labial commissure") Annotation( "Wikipedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (brain ventricle) AnnotationAssertion(Annotation( ) "One of the system of communicating cavities in the brain that are continuous with the central canal of the spinal cord, that like it are derived from the medullary canal of the embryo, that are lined with an epithelial ependyma, and that contain a serous fluid.") AnnotationAssertion(Annotation( "BIRNLEX:1356") "Organ cavity of the brain which consists of the lateral ventricles, the third and fourth ventricles and the cerebral aqueduct[BIRNLEX:1356].") AnnotationAssertion(Annotation( "FMA"^^xsd:string) "FMA draws the distinction between e.g. 'fourth ventricle' and 'cavity of fourth ventricle'. The latter is a cavity, and part of the former, which is a region. The superclass of 'fourth ventricle' is_a 'region of ventricular system of the brain'. We place this class here, although it is not equivalent to ventricles, as it includes ventricle bodies.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:1356") AnnotationAssertion( "BTO:0001442") AnnotationAssertion( "EFO:0001914") AnnotationAssertion( "EMAPA:32674") AnnotationAssertion( "FMA:78447") AnnotationAssertion( "HBA:9418") AnnotationAssertion( "MA:0000818") AnnotationAssertion( "MESH:D002552") AnnotationAssertion( "NCIT:C12356") AnnotationAssertion( "OpenCyc:Mx4rvmTY65wpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Ventricle_Brain") "UMLS:C0007799") AnnotationAssertion(Annotation( ) "brain ventricles") AnnotationAssertion(Annotation( "HP:0002118") "cerebral ventricle") AnnotationAssertion(Annotation( "FMA:78447") "region of ventricular system of brain") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004086") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "brain ventricle") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (vena cava) AnnotationAssertion(Annotation( ) Annotation( ) "Any of the veins that carries deoxygenated blood from a part of the body into the right atrium of the heart.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010215") AnnotationAssertion( "BTO:0001438") AnnotationAssertion( "EMAPA:18415") AnnotationAssertion( "FMA:321896") AnnotationAssertion( "GAID:547") AnnotationAssertion( "MA:0000068") AnnotationAssertion( "MESH:D014684") AnnotationAssertion( "NCIT:C12817") AnnotationAssertion( "OpenCyc:Mx4rkJQ4U6gEEdudWQACs5b6Bw") AnnotationAssertion(Annotation( "ncithesaurus:Vena_Cava") "UMLS:C0042460") AnnotationAssertion( "uberon") AnnotationAssertion( "caval vein") AnnotationAssertion(Annotation( ) Annotation( ) "venae cavae") AnnotationAssertion( "UBERON:0004087") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "vena cava") AnnotationAssertion( "Heart:numlabels.png"^^xsd:anyURI) AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/3/35/Relations_of_the_aorta,_trachea,_esophagus_and_other_heart_structures.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) # Class: (orbital region) AnnotationAssertion(Annotation( ) "The subdivision of the face that includes the eye (eyeball plus adnexa such as eyelids) and the orbit of the skull and associated parts of the face such as the eyebrows, if present.") AnnotationAssertion( "note the FMA class is more narrow though, and is more like eye + muscles + vasculature. The FMA also has FMA:72951 orbital part of eye") AnnotationAssertion(Annotation( "HP:0000284") "in HP covers eyelid, eyebrow.") AnnotationAssertion( "FMA:260119") AnnotationAssertion(Annotation( "FMA:260119") "content of orbital part of eye") AnnotationAssertion(Annotation( ) "eye region") AnnotationAssertion(Annotation( ) "orbital part of face") AnnotationAssertion( "uberon") AnnotationAssertion( "ocular and peri-ocular region") AnnotationAssertion( "ocular region") AnnotationAssertion(Annotation( "FMA:260119") "orbital content") AnnotationAssertion(Annotation( "FMA:72951") "orbital part of eye") AnnotationAssertion( "UBERON:0004088") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "orbital region") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (midface) AnnotationAssertion(Annotation( ) Annotation( "HP:0000309") "The middle of the face including the nose and its associated bony structures[MW].") AnnotationAssertion( "this class is currently a union of the snout (e.g. in mouse), the midface and the lower face. Note that in MA, snout includes the whole jaw and should thus be more alike the lower face than the midface, so its placement here is not strictly accurate. In future we might introduce specific classes for each of these, and include the full parthood relationships. if this is done, then care should be taken to preserve inferences such as an abnormality of the lower face being an abnormality of the midface.") AnnotationAssertion( "midfacial") AnnotationAssertion( "EMAPA:32806") AnnotationAssertion( "FMA:285406") AnnotationAssertion( "MA:0001910") AnnotationAssertion( "uberon") AnnotationAssertion( "lower face") AnnotationAssertion( "midface/lower face") AnnotationAssertion(Annotation( "MA:0001910") Annotation( ) "snout") AnnotationAssertion( "UBERON:0004089") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "midface") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (periorbital region) AnnotationAssertion(Annotation( "FMA"^^xsd:string) "does not contain any subparts in FMA. In HP covers eyelid, eyebrow, soft tissue") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:59351") AnnotationAssertion( "MA:0002875") AnnotationAssertion(Annotation( "FMA:59351") "periorbita") AnnotationAssertion(Annotation( "MA:0002875") "periorbital area") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004090") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "periorbital region") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (hypothalamus-pituitary axis) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004092") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "hypothalamus-pituitary axis") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (odontoid process of cervical vertebra 2) AnnotationAssertion(Annotation( ) Annotation( "GAID:238") Annotation( "HP:0003310") "The toothlike process on the upper surface of the axis, which articulates with the atlas above[GAID].") AnnotationAssertion( "TODO check AAO:0000721 odontoid_process -- Anterior process located between the atlantal cotyles that projects into the foramen magnum of the skull and bears facets that articulate with the lateral walls of the foramen") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0000721") Annotation( "AAO"^^xsd:string) Annotation( "AAO:Duellman_and_Trueb_1994"^^xsd:string) "Anterior process located between the atlantal cotyles that projects into the foramen magnum of the skull and bears facets that articulate with the lateral walls of the foramen.[AAO]") AnnotationAssertion( "UBERON:0005210") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0000721") AnnotationAssertion( "EMAPA:26535") AnnotationAssertion( "FMA:24043") AnnotationAssertion( "GAID:238") AnnotationAssertion( "MA:0002872") AnnotationAssertion( "MESH:D009809") AnnotationAssertion( "NCIT:C86970") AnnotationAssertion( "OpenCyc:Mx4rwIYGoJwpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Odontoid_Process") "UMLS:C0028881") AnnotationAssertion(Annotation( "FMA:24043") "axis dens") AnnotationAssertion(Annotation( "MA:0002872") "axis odontoid process") AnnotationAssertion(Annotation( "MA:0002872") "cervical vertebra 2 odontoid process") AnnotationAssertion(Annotation( "EMAPA:26535") "dens") AnnotationAssertion(Annotation( "FMA:24043") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "dens axis") AnnotationAssertion(Annotation( "FMA:24043") "dens of axis") AnnotationAssertion(Annotation( "FMA:24043") "odontoid process") AnnotationAssertion(Annotation( "FMA:24043") "odontoid process of axis") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "odontoid") AnnotationAssertion( "UBERON:0004096") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "odontoid process of cervical vertebra 2") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete renin-aldosterone axis) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004097") AnnotationAssertion(rdfs:label "obsolete renin-aldosterone axis") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (tibial plateaux) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004098") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "tibial plateaux") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (joint space of elbow) AnnotationAssertion(Annotation( "HP:0003943") "Joint cavity shared by all the joints of the elbow. The elbow joint is a compound joint that actually comprises three separate joints: the joints connecting the upper and lower arm: 1) Articulatio humero-ulnaris and 2) Articulatio humero-radialis as well as the proximal joint connecting the forarm bones: 3) Articulatio radio-ulnaris proximalis. All three share a joint cavity which is highly sinuated/scalloped/coved. Joint spaces of the elbow summarizes the joint cavity shared by all three adjoining joints of the elbow joint.") AnnotationAssertion( "FMA:38911") AnnotationAssertion(Annotation( "FMA:38911") "synovial cavity of elbow joint") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004099") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "joint space of elbow") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (renal collecting system) AnnotationAssertion(Annotation( ) Annotation( "HP:0004742") "The collecting duct system of the kidney consists of a series of tubules and ducts that connect the nephrons to the ureter. It participates in electrolyte and fluid balance through reabsorption and excretion, processes regulated by the hormones aldosterone and antidiuretic hormone.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:265239") AnnotationAssertion(Annotation( ) "collecting duct system") AnnotationAssertion(Annotation( ) "kidney collecting duct system") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "tubulus renalis colligens") AnnotationAssertion( "UBERON:0004100") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "renal collecting system") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/0/02/Gray1128.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (nasolabial region) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004101") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "nasolabial region") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (alveolar ridge) AnnotationAssertion(Annotation( ) Annotation( "HP:0006477") "One of the two jaw ridges either on the roof of the mouth between the upper teeth and the hard palate or on the bottom of the mouth behind the lower teeth[WP]. The alveolar ridges contain the sockets (alveoli) of the teeth[HP].") AnnotationAssertion(Annotation( "BTO"^^xsd:string) "in BTO, this is part of an embryo") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0001383") AnnotationAssertion( "EMAPA:35118") AnnotationAssertion( "FMA:313923") AnnotationAssertion( "GAID:215") AnnotationAssertion( "MA:0003119") AnnotationAssertion( "MESH:D000539") AnnotationAssertion( "NCIT:C89749") AnnotationAssertion(Annotation( "ncithesaurus:Alveolar_Ridge") "UMLS:C0447411") AnnotationAssertion(Annotation( "MP:0004189") "alveolar body") AnnotationAssertion(Annotation( "MP:0004189") "alveolar bone") AnnotationAssertion( "alveolar margin") AnnotationAssertion( "alveolar process") AnnotationAssertion(Annotation( ) "margo alveolaris") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004103") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "alveolar ridge") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (hairline) AnnotationAssertion(Annotation( ) "Anatomical line demarcating the boundary between forehead and scalp.") AnnotationAssertion( "FMA:285412") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004104") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "hairline") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (subungual region) AnnotationAssertion(Annotation( ) "Region beneath a nail or claw.") AnnotationAssertion( "consider merging with nailbed") AnnotationAssertion( "subungual") AnnotationAssertion( "CALOHA:TS-2351") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004105") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "subungual region") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (crus of ear) AnnotationAssertion(Annotation( "HP:0009895") "Horizontal piece of cartilage located outside the ear canal that divides the upper and lower parts of the ear.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:61024") AnnotationAssertion( "NCIT:C32410") AnnotationAssertion(Annotation( "ncithesaurus:Crus_Helicis") "UMLS:C0229319") AnnotationAssertion(Annotation( "FMA:61024") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "crus helicis") AnnotationAssertion( "crus of helical part of auricular cartilage") AnnotationAssertion(Annotation( "FMA:61024") "crus of helix") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004106") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "crus of ear") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "Wikipedia-uncited") ObjectSomeValuesFrom( )) # Class: (clivus of occipital bone) AnnotationAssertion(Annotation( ) Annotation( "HP:0010558") "Part of the cranium, the clivus is a shallow depression behind the dorsum sellC& that slopes obliquely backward. It forms a gradual sloping process at the anterior most portion of the basilar occipital bone at its junction with the sphenoid bone. On axial planes, it sits just posterior to the sphenoid sinuses. Just lateral to the clivus bilaterally is the foramen lacerum which contains the internal carotid artery, proximal to its anastamosis with the Circle of Willis. Posterior to the clivus is the basilar artery. The clivus supports the upper part of the pons.") AnnotationAssertion( "check relationships.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:75747") AnnotationAssertion( "NCIT:C12494") AnnotationAssertion(Annotation( "ncithesaurus:Clivus") "UMLS:C0222724") AnnotationAssertion(Annotation( "HP:0010558") "clivus") AnnotationAssertion(Annotation( "FMA:75747") "occipital bone clivus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "Wackenheim's clivus line") AnnotationAssertion(Annotation( "FMA:75747") "clivus ossis occipitalis") AnnotationAssertion( "UBERON:0004108") AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "The clivus is an important landmark for checking for anatomical atlanto-occipital alignment; the clivus, when viewed on a lateral C-spine X-ray, forms a line which, if extended, is known as Wackenheim's clivus line. Wackenheim's clivus line should pass through the dens of the axis or be tangential to it.") AnnotationAssertion(rdfs:label "clivus of occipital bone") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/c/c5/Clivus.png"^^xsd:anyURI) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "HP:0010558") ObjectSomeValuesFrom( )) SubClassOf(Annotation( "Wikipedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (cortex of humerus) AnnotationAssertion(Annotation( "PHENOSCAPE:ad"^^xsd:string) "The outer or sperficial part of the humerus.") AnnotationAssertion( "FMA:31542") AnnotationAssertion(Annotation( "FMA:31542") "compact bone of humerus") AnnotationAssertion( "cortex of the humerus") AnnotationAssertion( "humerus compact bone") AnnotationAssertion( "humerus cortical bone") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004109") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "cortex of humerus") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (midnasal cavity) AnnotationAssertion(Annotation( "HP:0010641") "An anatomical cavity that is the combination of the cavity between the nares and the choanae[HP,modified].") AnnotationAssertion( "FMA:59675") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004110") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "midnasal cavity") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (anatomical conduit) AnnotationAssertion(Annotation( ) "Any tube, opening or passage that connects two distinct anatomical spaces.") AnnotationAssertion(Annotation( "FMA"^^xsd:string) "FMA has both conduit and conduit space. In EHDAA2 this is a surface feature") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AEO:0000080") AnnotationAssertion( "EHDAA2:0003080") AnnotationAssertion( "FMA:242873") AnnotationAssertion(Annotation( "EHDAA2:0003080") "foramen") AnnotationAssertion(Annotation( ) Annotation( ) "foramina") AnnotationAssertion( "uberon") AnnotationAssertion( "opening") AnnotationAssertion(Annotation( ) "ostia") AnnotationAssertion( "ostium") AnnotationAssertion( "UBERON:0004111") AnnotationAssertion(rdfs:label "anatomical conduit") SubClassOf( ) SubClassOf( ObjectIntersectionOf(ObjectMinCardinality(2 ) ObjectMaxCardinality(2 ))) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (muscle of auditory ossicle) AnnotationAssertion(Annotation( ) "A muscle of the tympanic cavity that attaches to an auditory ossicle.") AnnotationAssertion( "attenuate low-frequency sounds, reduce masking of high-frequency sounds by low-frequency sounds, frequency-selection filter") AnnotationAssertion( "UBERON:0004112") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37776") AnnotationAssertion( "FMA:49026") AnnotationAssertion( "MA:0000256") AnnotationAssertion( "NCIT:C33148") AnnotationAssertion(Annotation( "ncithesaurus:Muscle_of_the_Tympanum") "UMLS:C1513769") AnnotationAssertion(Annotation( "FMA:49026") "auditory ossicles muscle") AnnotationAssertion(Annotation( "FMA:49026") "muscle of auditory ossicles") AnnotationAssertion( "muscle of tympanic cavity") AnnotationAssertion(Annotation( "FMA:49026") "ossicular muscle") AnnotationAssertion(Annotation( "MA:0000256") "tympanic cavity muscle") AnnotationAssertion( "uberon") AnnotationAssertion( "muscle of middle ear") AnnotationAssertion( "UBERON:0004113") AnnotationAssertion(rdfs:label "muscle of auditory ossicle") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (tympanic cavity) AnnotationAssertion(Annotation( ) "Small cavity surrounding the bones of the middle ear.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0002098") AnnotationAssertion( "EHDAA2:0004119") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37778") AnnotationAssertion( "EV:0100358") AnnotationAssertion( "FMA:56461") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "anatomical cavity of middle ear") AnnotationAssertion(Annotation( ) Annotation( ) "cavitas tympani") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "cavity of middle ear") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "middle ear cavity") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "middle-ear cavity") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0002098") "cavitas tympanica") AnnotationAssertion(Annotation( "BTO:0002098") "tympanum") AnnotationAssertion( "UBERON:0004114") AnnotationAssertion(rdfs:label "tympanic cavity") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/1/19/Gray923.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (blood vessel of tympanic cavity) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A blood vessel that is part of a tympanic cavity [Automatically generated definition].") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37775") AnnotationAssertion( "MA:0001219") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "anatomical cavity of middle ear blood vessel") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "blood vessel of anatomical cavity of middle ear") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "blood vessel of cavity of middle ear") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "blood vessel of middle ear anatomical cavity") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "blood vessel of middle ear cavity") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "cavity of middle ear blood vessel") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "middle ear anatomical cavity blood vessel") AnnotationAssertion( "middle ear blood vessel") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "middle ear cavity blood vessel") AnnotationAssertion( "tympanic cavity blood vessel") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004115") AnnotationAssertion(rdfs:label "blood vessel of tympanic cavity") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (nerve of tympanic cavity) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A nerve that is part of a tympanic cavity [Automatically generated definition].") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37777") AnnotationAssertion( "MA:0001222") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "anatomical cavity of middle ear nerve") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "cavity of middle ear nerve") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "middle ear anatomical cavity nerve") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "middle ear cavity nerve") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "nerve of anatomical cavity of middle ear") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "nerve of cavity of middle ear") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "nerve of middle ear anatomical cavity") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "nerve of middle ear cavity") AnnotationAssertion( "tympanic cavity nerve") AnnotationAssertion(Annotation( "MA:0001222") "tympanic cavity nerves") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004116") AnnotationAssertion(rdfs:label "nerve of tympanic cavity") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pharyngeal pouch) AnnotationAssertion(Annotation( ) Annotation( ) Annotation( "ZFA:0001106") "An internal pocketing of pharyngeal endoderm that contacts a region of ectoderm (a pharyngeal cleft) and interdigitates in the anterior and posterior directions with the pharyngeal arches.") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0001106") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "Outpocketings of pharyngeal endoderm that interdigitate with the neural crest derived pharyngeal arches. The pouches later fuse with the surface ectoderm to form the gill slits. Crump et al, 2004.[TAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001203") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "DOI:10.1111/j.1469-7580.2005.00472.x Graham A, Okabe M, Quinlan R, The role of the endoderm in the development and evolution of the pharyngeal arches. J Anat (2005)") "A conserved feature of all vertebrate embryos is the presence of a series of bulges on the lateral surface of the head, the pharyngeal arches; it is within these structures that the nerves, muscles and skeletal components of the pharyngeal apparatus are laid down. The pharyngeal arches are separated by endodermal outpocketings, the pharyngeal pouches.[well established][VHOG]") AnnotationAssertion(Annotation( "EMAPA"^^xsd:string) "EMAPA also includes a distinct pouch endoderm") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0011113") AnnotationAssertion( "EFO:0003627") AnnotationAssertion( "EHDAA:1086") AnnotationAssertion( "EHDAA:1669") AnnotationAssertion( "EHDAA:579") AnnotationAssertion( "EHDAA:617") AnnotationAssertion( "EMAPA:32752") AnnotationAssertion( "FMA:293063") AnnotationAssertion( "NCIT:C34252") AnnotationAssertion( "TAO:0001106") AnnotationAssertion(Annotation( "ncithesaurus:Pharyngeal_Pouch") "UMLS:C0231067") AnnotationAssertion( "VHOG:0001203") AnnotationAssertion( "XAO:0000282") AnnotationAssertion( "ZFA:0001106") AnnotationAssertion(Annotation( ) "branchial pouch") AnnotationAssertion(Annotation( ) "visceral pouch") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "VHOG:0001203") "pharyngeal pouches") AnnotationAssertion(Annotation( "VHOG:0001203") "visceral pouches") AnnotationAssertion( "UBERON:0004117") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "The pouches are polarized structures. For example, whereas the rostral half of each pouch expresses Bmp-7, the caudal half expresses FGF-8 and the dorsal aspect of each pouch is marked via its expression of Pax-1. each pouch has an individual sense of identity. Shh expression is a prominent early feature of the caudal endoderm of the second arch, and individual pouches mark the anterior limits of expression of Hox genes within the pharyngeal endoderm; Hox-a2 has a rostral boundary at the second pouch, Hox-a3 at the third pouch and Hox-a4 at the most caudal pouch[PMID:16313389]") AnnotationAssertion(rdfs:label "pharyngeal pouch") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) SubClassOf(Annotation( "EHDAA2"^^xsd:string) Annotation( "ZFA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (vasculature of iris) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A vasculature that is part of a iris [Automatically generated definition].") AnnotationAssertion( "ZFA:0005568") AnnotationAssertion(Annotation( "ZFA:0005568") "iris blood vessels") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "iris vascular network") AnnotationAssertion( "iris vasculature") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "vascular network of iris") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004118") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "vasculature of iris") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (endoderm-derived structure) AnnotationAssertion(Annotation( ) "An anatomical structure that develops (entirely or partially) from the endoderm.") AnnotationAssertion( "Grouping term for query purposes") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004119") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "endoderm-derived structure") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (mesoderm-derived structure) AnnotationAssertion(Annotation( ) "An anatomical structure that develops (entirely or partially) from the mesoderm.") AnnotationAssertion( "Grouping term for query purposes") AnnotationAssertion( "FBbt:00025998") AnnotationAssertion(Annotation( "FBbt:00025998") "mesodermal derivative") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004120") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "mesoderm-derived structure") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (ectoderm-derived structure) AnnotationAssertion(Annotation( ) "An anatomical structure that develops (entirely or partially) from the ectoderm.") AnnotationAssertion( "Grouping term for query purposes") AnnotationAssertion( "FBbt:00025990") AnnotationAssertion(Annotation( "FBbt:00025990") "ectodermal deriviative") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004121") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "ectoderm-derived structure") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (genitourinary system) AnnotationAssertion(Annotation( "VHOG:0000286") "Anatomical system that has as its parts the organs concerned with the production and excretion of urine and those concerned with reproduction.") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0000624") Annotation( "AAO"^^xsd:string) Annotation( "AAO:EJS"^^xsd:string) "Anatomical system that has as its parts the organs concerned with the production and excretion of urine and those concerned with reproduction.[AAO]") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0000624") Annotation( "AAO"^^xsd:string) "relationship type change: differentiates_from intermediate mesoderm (AAO:0010575) CHANGED TO: develops_from intermediate mesoderm (UBERON:0003064)[AAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000286") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0030223693 Liem KF, Bemis WE, Walker WF, Grande L, Functional Anatomy of the Vertebrates: An Evolutionary Perspective (2001) p.633") "Kidneys and gonads (of vertebrates) develop from adjacent tissues, and after the excretory or urinary ducts have developed, the reproductive system usually taps into them or their derivatives.[well established][VHOG]") AnnotationAssertion( "genitourinary") AnnotationAssertion( "urogenital") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0000624") AnnotationAssertion( "BILA:0000122") AnnotationAssertion( "BTO:0003091") AnnotationAssertion( "EFO:0003864") AnnotationAssertion( "EHDAA:1013") AnnotationAssertion( "EMAPA:16367") AnnotationAssertion( "EV:0100094") AnnotationAssertion( "FMA:280610") AnnotationAssertion( "GAID:362") AnnotationAssertion( "MESH:D014566") AnnotationAssertion( "NCIT:C12810") AnnotationAssertion( "OpenCyc:Mx4rQRpVMgAKEdyHxgDggVfs8g") AnnotationAssertion(Annotation( "ncithesaurus:Genitourinary_System") "UMLS:C0042066") AnnotationAssertion( "VHOG:0000286") AnnotationAssertion( "XAO:0000140") AnnotationAssertion( "galen:GenitoUrinarySystem") AnnotationAssertion( "urogenital system") AnnotationAssertion( "uberon") AnnotationAssertion( "GU tract") AnnotationAssertion( "UG tract") AnnotationAssertion(Annotation( "BTO:0003091") "Urogenitalsystem") AnnotationAssertion(Annotation( "FMA:280610") "genito-urinary system") AnnotationAssertion( "genitourinary tract") AnnotationAssertion(Annotation( "BTO:0003091") "urogenital tract") AnnotationAssertion( "UBERON:0004122") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "genitourinary system") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (myocardial layer) AnnotationAssertion(Annotation( ) "Any of the layers of the myocardium. Example: compact layer, trabecular layer.") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37475") AnnotationAssertion( "MA:0000080") AnnotationAssertion( "layer of myocardium") AnnotationAssertion( "myocardium layer") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004123") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "myocardial layer") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (myocardium trabecular layer) AnnotationAssertion(Annotation( "ZFA:0005059") "The layer of the myocardium composed of projections of contractile myocytes. The trabecular layer is bounded internally by the endocardium. In zebrafish, unlike the trabeculations of higher vertebrates, both atrial and ventricular trabeculae have more strut-like character, and are more uniform without apparent regional differences[ZFA].") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0005059") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "The layer of the myocardium composed of projections of contractile myocytes. The trabecular layer is bounded internally by the the endocardium. Unlike the trabeculations of higher vertebrates, both atrial and ventricular trabeculae of the zebrafish have more strut-like character, and are more uniform without apparent regional differences Hu et al. 2001.[TAO]") AnnotationAssertion( "EFO:0003706") AnnotationAssertion( "MA:0002866") AnnotationAssertion( "TAO:0005059") AnnotationAssertion( "ZFA:0005059") AnnotationAssertion( "myocardial trabecular layer") AnnotationAssertion(Annotation( "ZFA:0005059") "trabecular layer") AnnotationAssertion( "uberon") AnnotationAssertion( "heart muscle trabecula") AnnotationAssertion(Annotation( ) "heart muscle trabeculae") AnnotationAssertion(Annotation( ) "myocardial trabeculae carneae") AnnotationAssertion( "trabecula of heart muscle") AnnotationAssertion(Annotation( "TAO:0005059") "trabeculae") AnnotationAssertion( "UBERON:0004124") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "myocardium trabecular layer") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (myocardial compact layer) AnnotationAssertion(Annotation( "MP:0004056") "Outer dense layer of the myocardium uniting the epicardium and myocardium[MP].") AnnotationAssertion( "MA:0002865") AnnotationAssertion(Annotation( "MP:0004056") "compact subepicardial layer") AnnotationAssertion(Annotation( "MP:0004056") "heart compact layer") AnnotationAssertion(Annotation( "MP:0004056") "myocardial compact layer") AnnotationAssertion(Annotation( "MA:0002865") "myocardium compact layer") AnnotationAssertion(Annotation( "MP:0004056") "subepicardial layer") AnnotationAssertion(Annotation( "MP:0004056") "subepicardium") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "MP:0004056") "compact subepicardial myocardium") AnnotationAssertion(Annotation( "MP:0004056") "subepicardium layer") AnnotationAssertion( "UBERON:0004125") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "myocardial compact layer") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (trabecular layer of ventricle) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A myocardium trabecular layer that is part of a cardiac ventricle.") AnnotationAssertion( "TODO - check FMA") AnnotationAssertion( "FMA:83511") AnnotationAssertion( "TAO:0005060") AnnotationAssertion( "ZFA:0005060") AnnotationAssertion(Annotation( "FMA:83511") "myocardium of region of ventricle") AnnotationAssertion(Annotation( "GO:0003222") "trabecular cardiac ventricle muscle") AnnotationAssertion(Annotation( "GO:0003222") "ventricular trabecular myocardium") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004126") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "trabecular layer of ventricle") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (compact layer of ventricle) AnnotationAssertion(Annotation( "ZFA:0005062") "The outer layer the ventricular myocardium, muscle fibers are arranged in a compact form and involved the entire ventricle.") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0005062") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "The outer layer the ventricular myocardium, muscle fibers are arranged in a compact form and involved the entire ventricle.[TAO]") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37833") AnnotationAssertion( "TAO:0005062") AnnotationAssertion( "ZFA:0005062") AnnotationAssertion( "compact cardiac ventricle muscle") AnnotationAssertion(Annotation( "MP:0010556") "ventricle myocardium compact zone") AnnotationAssertion( "ventricular compact myocardium") AnnotationAssertion(Annotation( "MP:0010556") "ventricular myocardial compact layer") AnnotationAssertion(Annotation( "MP:0010556") "ventricular myocardial compact zone") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004127") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "compact layer of ventricle") SubClassOf( ) SubClassOf(Annotation( "ZFA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (optic vesicle) AnnotationAssertion(Annotation( ) Annotation( "GO:0003404") "The optic vesicle is the evagination of neurectoderm that precedes formation of the optic cup[GO]. Portion of tissue that is comprised of neuroepitheium which has pinched off from the anterior neural keel and will form the optic cup[ZFA].") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000165") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0030223693 Liem KF, Bemis WE, Walker WF, Grande L, Functional Anatomy of the Vertebrates: An Evolutionary Perspective (2001) p.429"^^xsd:string) "(...) an essentially similar sequence of events occurs during the embryonic development of the vertebrate eye. The eye initially develops as a single median evagination of the diencephalon that soon bifurcates to form the paired optic vesicles.[well established][VHOG]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0011039") AnnotationAssertion( "EHDAA2:0001320") AnnotationAssertion( "EMAPA:16540") AnnotationAssertion( "FMA:293357") AnnotationAssertion( "NCIT:C34236") AnnotationAssertion( "TAO:0000050") AnnotationAssertion(Annotation( "ncithesaurus:Optic_Vesicle") "UMLS:C0231106") AnnotationAssertion( "VHOG:0000165") AnnotationAssertion( "XAO:0000228") AnnotationAssertion( "ZFA:0000050") AnnotationAssertion( "uberon") AnnotationAssertion( "evagination") AnnotationAssertion(Annotation( "XAO:0000228") "eye vesicle") AnnotationAssertion(Annotation( "VHOG:0000165") "ocular vesicle") AnnotationAssertion(Annotation( "ZFA:0000050") Annotation( ) "optic vesicles") AnnotationAssertion( "UBERON:0004128") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "Genes: Six3, Pax6, Rx1 are expressed together in the tip of the neural plate [ISBN:9780878932504 \"Developmental Biology\"]. Development notes: During subsequent develop- ment, the optic vesicle invaginates and becomes a two-layered structure with an inner neural retina and outer retinal pigment epithelium. As soon as the developing optic vesicle makes contact with the overlying ectoderm, it induces the ectoderm to thicken and form the lens placode [PMID:16496288]") AnnotationAssertion(rdfs:label "optic vesicle") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/e/e0/Gray863.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "ZFA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "GO-def") ObjectSomeValuesFrom( )) SubClassOf(Annotation( "ZFA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (growth plate cartilage) AnnotationAssertion(Annotation( "GO:0003417") "Cartilage that will provide a scaffold for mineralization of endochondral bones as they elongate or grow.") AnnotationAssertion( "uberon") AnnotationAssertion( "growth plate") AnnotationAssertion( "UBERON:0004129") AnnotationAssertion(rdfs:label "growth plate cartilage") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (cerebellar layer) AnnotationAssertion(Annotation( ) Annotation( "ncithesaurus:Cortical_Cell_Layer_of_the_Cerebellum") "A cortical cell layer of the cerebellum. Examples: the granular (inner+outer) layer, molecular layer, Purkinje cell layer, and the ventricular layer of the embryo.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:880") AnnotationAssertion( "EMAPA:35212") AnnotationAssertion( "FMA:83141") AnnotationAssertion( "MA:0000201") AnnotationAssertion( "NCIT:C49137") AnnotationAssertion(Annotation( "ncithesaurus:Cortical_Cell_Layer_of_the_Cerebellum") "UMLS:C1707522") AnnotationAssertion( "cell layer of cerebellar cortex") AnnotationAssertion(Annotation( "BIRNLEX:880") "cytoarchitectural part of the cerebellar cortex") AnnotationAssertion(Annotation( "FMA:83141") "gray matter layer of cerebellum") AnnotationAssertion( "layer of cerebellar cortex") AnnotationAssertion( "layer of cerebellum") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004130") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "cerebellar layer") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (trigeminal sensory nucleus) AnnotationAssertion(Annotation( ) "The sensory trigeminal nerve nuclei are the largest of the cranial nerve nuclei, and extend through the whole of the midbrain, pons and medulla. The nucleus is divided into three parts, from rostral to caudal (top to bottom in humans): * The mesencephalic nucleus * The chief sensory nucleus (or pontine nucleus or main sensory nucleus or primary nucleus) * The spinal trigeminal nucleus[WP].") AnnotationAssertion( "TODO - check ZFA link. note this is part of medulla in ZFA, but we do not include this link here as it leads to inconsistencies") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:35884") AnnotationAssertion( "MA:0001030") AnnotationAssertion( "TAO:0000433") AnnotationAssertion( "VHOG:0001356") AnnotationAssertion( "ZFA:0000433") AnnotationAssertion( "sensory trigeminal V nucleus") AnnotationAssertion(Annotation( "TAO:0000433") Annotation( ) "sensory trigeminal nuclei") AnnotationAssertion(Annotation( "ZFA:0000433") "sensory trigeminal nucleus") AnnotationAssertion(Annotation( "MA:0001030") "trigeminal V sensory nucleus") AnnotationAssertion(Annotation( "GO:0021730") "trigeminal sensory nucleus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004132") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "trigeminal sensory nucleus") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/3/30/Gray696.png"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "MA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (salivatory nucleus) AnnotationAssertion(Annotation( "GO:0021751") "salivary nucleus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004133") AnnotationAssertion(rdfs:label "salivatory nucleus") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (proximal tubule) AnnotationAssertion(Annotation( "GO:0072014") "In mammals, the proximal tubule is a nephron tubule that connects Bowman's capsule to the loop of Henle. It has a brush border epithelial morphology[GO].") AnnotationAssertion( "TODO - ensure definition works across species.") AnnotationAssertion( "BTO:0001498") AnnotationAssertion( "CALOHA:TS-0509") AnnotationAssertion( "EMAPA:28281") AnnotationAssertion( "MA:0002611") AnnotationAssertion( "MESH:D007687") AnnotationAssertion(Annotation( "MA:0002611") "kidney proximal tubule") AnnotationAssertion(Annotation( "MESH:A05.810.453.736.560.570") "proximal kidney tubule") AnnotationAssertion( "renal proximal tubule") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004134") AnnotationAssertion(rdfs:label "proximal tubule") SubClassOf( ) SubClassOf(Annotation( "GO"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "GO"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (distal tubule) AnnotationAssertion(Annotation( "GO:0072017") "The distal tubule is a nephron tubule that consists of the distal convoluted tubule and distal straight tubule segments.") AnnotationAssertion( "BTO:0000482") AnnotationAssertion( "CALOHA:TS-0504") AnnotationAssertion( "EMAPA:28387") AnnotationAssertion( "MA:0002633") AnnotationAssertion( "MESH:D007686") AnnotationAssertion(Annotation( "MA:0002633") "kidney distal tubule") AnnotationAssertion( "renal distal tubule") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004135") AnnotationAssertion(rdfs:label "distal tubule") SubClassOf( ) # Class: (intermediate tubule) AnnotationAssertion(Annotation( "GO:0072018") "The intermediate tubule is a nephron tubule that lies between the proximal and distal tubules.") AnnotationAssertion( "TODO - check for applicability across species") AnnotationAssertion( "FMA:17718") AnnotationAssertion( "renal intermediate tubule") AnnotationAssertion(Annotation( "FMA:17718") "tubulus attenuatus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004136") AnnotationAssertion(rdfs:label "intermediate tubule") SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (somitomeric trunk muscle) AnnotationAssertion(Annotation( "GO:0002075") "The somitomeric trunk muscle is derived from somitomeric mesoderm. The muscle begins its development with the differentiation of the muscle cells and ends with the mature muscle. An example of this process is found in Mus musculus.[GO].") AnnotationAssertion( "TODO - find N+S conditions. SMT & develops_from somite is not specific enough (all SMT develops_from somite)") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004138") AnnotationAssertion(rdfs:label "somitomeric trunk muscle") SubClassOf( ) # Class: (cardiogenic plate) AnnotationAssertion(Annotation( "GO:0003142") "The first recognizable structure derived from the heart field.") AnnotationAssertion( "TODO - check plate vs rudiment vs primordium vs endocardial tube. See XAO") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000975") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "PMID:15611355 Gittenberger-de Groot AC, Bartelings MM, Deruiter MC, Poelmann RE, Basics of cardiac development for the understanding of congenital heart malformations. Pediatric Research (2005)") "(In vertebrates) The embryonic mesoderm is the source of both the cardiogenic plate, giving rise to the future myocardium as well as the endocardium that will line the system on the inner side.[well established][VHOG]") AnnotationAssertion( "EHDAA2:0000215") AnnotationAssertion( "EMAPA:16106") AnnotationAssertion( "VHOG:0000975") AnnotationAssertion(Annotation( "EHDAA2:0000215") "myocardial plate") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "EMAPA:16106") "cardiac crescent") AnnotationAssertion(Annotation( "GO:0003142") "cardiogenic crescent") AnnotationAssertion( "heart rudiment") AnnotationAssertion( "UBERON:0004139") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "cardiogenic plate") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (primary heart field) AnnotationAssertion(Annotation( "GO:0003138") Annotation( "GOC:mtg_heart") Annotation( "GOC:rl") "A specific region of the lateral mesoderm that will form the primary beating heart tube. In mammals the primary heart field gives rise to the left ventricle.") AnnotationAssertion(Annotation( "GO") "this term denotes the primary heart field; GO:0003128 denotes the superclass of primary and secondary: specific region of the lateral mesoderm into the area which will form the primary beating heart tube[GO:0003138]") AnnotationAssertion( "XAO:0004185") AnnotationAssertion(Annotation( "XAO:0004185") "first heart field") AnnotationAssertion(Annotation( ) Annotation( "XAO:0004185") "primary heart field") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "XAO:0004185") Annotation( ) "FHF") AnnotationAssertion(Annotation( "XAO:0004185") Annotation( ) "PHF") AnnotationAssertion(Annotation( "XAO:0004185") "heart field") AnnotationAssertion( "UBERON:0004140") AnnotationAssertion(rdfs:label "primary heart field") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "GO:0003128") ObjectSomeValuesFrom( )) SubClassOf(Annotation( "BGEE:ann") ObjectSomeValuesFrom( )) # Class: (heart tube) AnnotationAssertion(Annotation( "GO:0003143") Annotation( "GOC:mtg_heart") "An epithelial tube that will give rise to the mature heart.") AnnotationAssertion(Annotation( "MP:0012700") "the paired, longitudinal, endothelial-lined channels formed from the cardiogenic mesoderm in embryonic development; angiogenic cell clusters (aka angioblastic cords) located in a horse-shoe shape configuration in the cardiogenic plate coalesce to form the right and left endocardial heart tubes which then fuse in cephalo-caudal direction to form a single primitive heart tube.") AnnotationAssertion( "AAO:0010411") AnnotationAssertion( "EFO:0003526") AnnotationAssertion( "EMAPA:32685") AnnotationAssertion( "NCIT:C34161") AnnotationAssertion( "TAO:0000360") AnnotationAssertion( "XAO:0000337") AnnotationAssertion( "ZFA:0000360") AnnotationAssertion(Annotation( "GO:0003143") "embryonic heart tube") AnnotationAssertion(Annotation( "MP:0012700") "endocardial heart tube") AnnotationAssertion(Annotation( "XAO:0000337") "endocardial tube") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004141") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "heart tube") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "ZFA-modified"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (outflow tract septum) AnnotationAssertion(Annotation( "GO:0003148") "The outflow tract septum is a partition in the outflow tract.") AnnotationAssertion( "XAO:0004141") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004142") AnnotationAssertion(rdfs:label "outflow tract septum") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (outflow tract) AnnotationAssertion(Annotation( "GO:0003151") "The outflow tract is the portion of the heart through which blood flows into the arteries.") AnnotationAssertion( "Depending on the species, attached at the cardiac outflow are described the conus arteriosus, the truncus arteriosus and, or the bulbus arteriosus. At the distal limit of these outflow structures, but lying outside the pericardial cavity, is the ventral aorta[PMID:20735616]") AnnotationAssertion( "EHDAA2:0001351") AnnotationAssertion( "EHDAA:464") AnnotationAssertion( "EHDAA:798") AnnotationAssertion( "EMAPA:16346") AnnotationAssertion( "MA:0000100") AnnotationAssertion( "VHOG:0000670") AnnotationAssertion( "XAO:0004139") AnnotationAssertion(Annotation( ) "cardiac outflow tract") AnnotationAssertion( "heart outflow tract") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "arterial (outflow) pole") AnnotationAssertion( "UBERON:0004145") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "outflow tract") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (His-Purkinje system) AnnotationAssertion(Annotation( ) Annotation( "GO:0003164") "The His-Purkinje system receives signals from the AV node and is composed of the fibers that regulate cardiac muscle contraction in the ventricles.") AnnotationAssertion(Annotation( ) "the intraventricular conduction system from the bundle of His to the distal Purkinje fibers, which carries the impulse to the ventricles.") AnnotationAssertion(Annotation( ) "HPS") AnnotationAssertion( "His-Purkinji network") AnnotationAssertion( "VCS") AnnotationAssertion( "ventricular conduction system") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004146") AnnotationAssertion(rdfs:label "His-Purkinje system") SubClassOf(Annotation( "cjm"^^xsd:string) ) SubClassOf( ) SubClassOf(Annotation( "GO"^^xsd:string) ObjectSomeValuesFrom( )) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (cardiac vein) AnnotationAssertion(Annotation( ) "Vein of heart that drains the myocardium.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0004507") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37137") AnnotationAssertion( "FMA:12846") AnnotationAssertion( "NCIT:C12878") AnnotationAssertion( "NCIT:C12882") AnnotationAssertion(Annotation( "ncithesaurus:Cardiac_Vein") "UMLS:C0226654") AnnotationAssertion(Annotation( "ncithesaurus:Coronary_Vein") "UMLS:C0226737") AnnotationAssertion( "ZFA:0005814") AnnotationAssertion( "galen:CoronaryVein") AnnotationAssertion(Annotation( "FMA:12846") "cardiac vein") AnnotationAssertion(Annotation( "ZFA:0005814") "coronary vein") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "heart vein") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "vein of heart") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "coronary vein") AnnotationAssertion( "UBERON:0004148") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "cardiac vein") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (ventriculo bulbo valve) AnnotationAssertion(Annotation( "GO:0003173") "A heart valve located between the ventricle and bulbus arteriosus.") AnnotationAssertion( "TAO:0001375") AnnotationAssertion( "ZFA:0001375") AnnotationAssertion(Annotation( "ZFA:0001375") "bulboventricular valve") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004149") AnnotationAssertion(rdfs:label "ventriculo bulbo valve") SubClassOf( ) # Class: (coronary sinus valve) AnnotationAssertion(Annotation( "GO:0003178") "Vestigial cardiac valve which is continuous with the valve of the inferior vena cava[FMA].") AnnotationAssertion( "TODO - development") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:9242") AnnotationAssertion( "thebesian valve") AnnotationAssertion( "thebesius valve") AnnotationAssertion( "valve of coronary sinus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004150") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "coronary sinus valve") SubClassOf( ) # Class: (cardiac chamber) AnnotationAssertion(Annotation( "GO:0003205") "A cardiac chamber surrounds an enclosed cavity within the heart.") AnnotationAssertion( ) AnnotationAssertion( "FMA:7095") AnnotationAssertion( "OpenCyc:Mx4rmexpjPdAEduAAAAOpmP6tw") AnnotationAssertion( "chamber of heart") AnnotationAssertion( "heart chamber") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004151") AnnotationAssertion(rdfs:comment "generic enough to cover FBbt:00003156 heart chamber but this is a cavity. GO defines it as the cavity. TODO - move subclasses. Note this also includes sinus venosus") AnnotationAssertion(rdfs:label "cardiac chamber") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (bulbus arteriosus) AnnotationAssertion(Annotation( ) Annotation( "GO:0003232") "The bulbus arteriosus is an elastic heart chamber[GO]. Multi-tissue structure that consists of three layers and through which the blood exits the heart. The bulbus arteriosus is a pear shaped chamber that functions as a capacitor, maintaining continuous blood flow into the gill arches[ZFA].") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0000173") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "A pear shaped chamber that functions as a capacitor, maintaining continuous blood flow into the gill arches. The bulbus arteriosus has three distinct layers. Hu et al. 2000.[TAO]") AnnotationAssertion( "replaces conus arteriosis in cartilaginous fish") AnnotationAssertion( "EFO:0003505") AnnotationAssertion( "TAO:0000173") AnnotationAssertion( "ZFA:0000173") AnnotationAssertion(Annotation( "ZFA:0000173") "truncus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004152") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "bulbus arteriosus") SubClassOf( ) SubClassOf(Annotation( "definitional"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (ventricular septum intermedium) AnnotationAssertion(Annotation( ) Annotation( "GO:0003282") "Endocardial cushions project into the atrial canal, and, meeting in the middle line, unite to form the septum intermedium which divides the canal into two channels, the future right and left atrioventricular orifices[Gray's via WP].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "septum intermedium") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004153") AnnotationAssertion(rdfs:label "ventricular septum intermedium") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/4/4d/Gray467.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "Wikipedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (atrial septum primum) AnnotationAssertion(Annotation( "GO:0003284") "In the developing heart, the cavity of the primitive atrium becomes subdivided into right and left chambers by a septum, the septum primum, which grows downward into the cavity. The increasingly smaller gap below it (before it fuses with the endocardial cushion) is known as the ostium primum. The septum primum eventually fuses with the endocardial cushion, closing the ostium primum off completely. Meanwhile, perforations appear in the superior part of the septum primum, forming the ostium secundum. This will eventually form part of the fossa ovalis.") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000020") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( ) "The first of the two membranous sheets which partially separate the two atria during embryonic development. [TFD][VHOG]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000020") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0030223693 Liem KF, Bemis WE, Walker WF, Grande L, Functional Anatomy of the Vertebrates: An Evolutionary Perspective (2001) p.620") "The tetrapod clade develops a complete atrial septum and loses the fifth aortic arch altogether.[well established][VHOG]") AnnotationAssertion(Annotation( "EHDAA2"^^xsd:string) "part_of IAS in EHDAA2") AnnotationAssertion( "UBERON:0004157") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0001825") AnnotationAssertion( "EHDAA:1900") AnnotationAssertion( "EMAPA:17013") AnnotationAssertion( "FMA:63909") AnnotationAssertion( "NCIT:C34294") AnnotationAssertion(Annotation( "ncithesaurus:Septum_Primum") "UMLS:C0225837") AnnotationAssertion( "VHOG:0000020") AnnotationAssertion(Annotation( "GO:0003289") "atrial septum primum") AnnotationAssertion(Annotation( "EHDAA2:0001825") "interatrial septum primum") AnnotationAssertion(Annotation( "FMA:63909") "septum primum") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004154") AnnotationAssertion(rdfs:label "atrial septum primum") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/c/c7/Gray465.png"^^xsd:anyURI) SubClassOf( ) # Class: (atrial septum secundum) AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000021") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( ) "The second of the two membranous sheets which partially separate the two atria during embryonic development. [TFD][VHOG]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000021") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0030223693 Liem KF, Bemis WE, Walker WF, Grande L, Functional Anatomy of the Vertebrates: An Evolutionary Perspective (2001) p.620") "The tetrapod clade develops a complete atrial septum and loses the fifth aortic arch altogether.[well established][VHOG]") AnnotationAssertion( "UBERON:0004158") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0001827") AnnotationAssertion( "EHDAA:3406") AnnotationAssertion( "EMAPA:17864") AnnotationAssertion( "FMA:63910") AnnotationAssertion( "NCIT:C34295") AnnotationAssertion(Annotation( "ncithesaurus:Septum_Secundum") "UMLS:C0225838") AnnotationAssertion( "VHOG:0000021") AnnotationAssertion(Annotation( "EHDAA2:0001827") "interatrial septum secundum") AnnotationAssertion(Annotation( "FMA:63910") "septum secundum") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004155") AnnotationAssertion(rdfs:comment "The septum secundum, semilunar in shape, grows downward from the upper wall of the atrium immediately to the right of the primary septum and ostium secundum. Shortly after birth it fuses with the septum primum, and consequently the foramen ovale is closed, but sometimes the fusion is incomplete and the upper part of the foramen remains patent. The limbus fossae ovalis denotes the free margin of the septum secundum.") AnnotationAssertion(rdfs:label "atrial septum secundum") SubClassOf( ) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (atrial septum intermedium) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004159") AnnotationAssertion(rdfs:label "atrial septum intermedium") SubClassOf( ) # Class: (proepicardium) AnnotationAssertion(Annotation( ) Annotation( "GO:0003342") "An embryonic group of progenitor cells that forms from an outpouching of the septum transversum near the venous pole of the heart and gives rise to the epicardium.") AnnotationAssertion( "propepicardial") AnnotationAssertion( "Proepicardial clusters in Zebrafish form on the pericardial wall, adjacent to the atrioventricular (AV) junction and near the venous pole[ZFA]") AnnotationAssertion( "EMAPA:36025") AnnotationAssertion( "ZFA:0005808") AnnotationAssertion(Annotation( "ZFA:0005808") "proepicardial cluster") AnnotationAssertion(Annotation( "ZFIN:ZDB-PUB-080218-16") "proepicardial organ") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004160") AnnotationAssertion(rdfs:label "proepicardium") SubClassOf( ) SubClassOf(Annotation( "todo check other taxa") ObjectSomeValuesFrom( )) SubClassOf(Annotation( "ZFA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (septum transversum) AnnotationAssertion(Annotation( ) Annotation( "VHOG:0000019") "A thick plate of mesodermal tissue that occupies the space between the thoracic cavity and yolk stalk in the early embryo, forming a transverse partition partially separating the coelomic cavity into thoracic and abdominal portions. It gives rise to the central tendon of the diaphragm[VHOG].") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000019") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( ) "A thick plate of mesodermal tissue that occupies the space between the thoracic cavity and yolk stalk in the early embryo, forming a transverse partition partially separating the coelomic cavity into thoracic and abdominal portions. It gives rise to the central tendon of the diaphragm. [TFD][VHOG]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000019") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0471090588 Hildebrand M, Analysis of vertebrate structure (1983) p.205-206") "In hagfishes a transverse septum extends upward from the ventral body wall posterior to the heart, partly separating an anterior pericardial cavity from a larger peritoneal cavity. (...) These basic relationships have not been modified by urodeles. The small pericardial cavity remains far forward where it is separated by a transverse septum from the principal coelom, which may now be called a pleuroperitoneal cavity because slender lungs are present. (...) The heart (of other tetrapods) is separated from the lungs (and liver if present) by more or less horizontal partitions that have their origin in the embryo as folds on the serous membrane of the right and left lateral body walls. These grow out to join in the midline of the body. They are called lateral mesocardia (birds) or pleuropericardial membranes. Posteriorly they join the transverse septum to form the adult pericardial membrane, or pericardium. (...) In their partitioning of their coelom, embryonic mammals resemble first early fishes (incomplete partition, posterior to heart, consisting of the transverse septum) and then reptiles (pericardium derived from transverse septum and pleuropericardial membranes) Mammals then separate paired pleural cavities from the peritoneal cavity by a diaphragm. The ventral portion of this organ comes from the transverse septum. The dorsal portion is derived from the dorsal mesentery and from still another pair of outgrowths from the lateral body wall, the pleuroperitoneal membranes.[well established][VHOG]") AnnotationAssertion( "The cranial part of the septum transversum gives rise to the central tendon of the diaphragm and is the origin of the myoblasts that invade the pleuroperitoneal folds resulting in the formation of the muscular diaphragm. The caudal part of the septum transversum is invaded by the hepatic diverticulum which divides within it to form the liver and thus gives rise to the ventral mesentery of the foregut.") AnnotationAssertion(Annotation( "EHDAA2"^^xsd:string) "in EHDAA2 this is divided into mesenchymal portion and hepatic diverticulum") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0001829") AnnotationAssertion( "EHDAA:736") AnnotationAssertion( "EMAPA:16318") AnnotationAssertion( "FMA:295593") AnnotationAssertion( "NCIT:C34296") AnnotationAssertion(Annotation( "ncithesaurus:Septum_Transversum") "UMLS:C0231004") AnnotationAssertion( "VHOG:0000019") AnnotationAssertion(Annotation( ) "transverse septum") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004161") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "septum transversum") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pulmonary myocardium) AnnotationAssertion(Annotation( "GO:0003350") "The pulmonary myocardium is the myocardial tissue present in the pulmonary vein.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004162") AnnotationAssertion(rdfs:label "pulmonary myocardium") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (anterior ectodermal midgut) AnnotationAssertion(Annotation( "GO:0007441") "Portions of the midgut that are derived from ectoderm.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004163") AnnotationAssertion(rdfs:label "anterior ectodermal midgut") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (branchiomeric muscle) AnnotationAssertion(Annotation( "ISBN:0073040584"^^xsd:string) "A jaw muscle that arises from cranial mesenchyme and is innervated by cranial nerves.") AnnotationAssertion(Annotation( "GO:0014707") "The branchiomeric muscle is derived from cranial mesoderm and controls facial expression, pharyngeal and laryngeal function, operating the jaw. Branchiomeric muscles of mammals correspond to the musculature of fish[GO][GO:0014707].") AnnotationAssertion( "It has been hypothesized that Haikouella must have been powered by branchiomeric muscles, as in living craniates, rather than by water moving through the pharynx via ciliary currents, as in lancelets[http://icb.oxfordjournals.org/content/42/4/743.full]") AnnotationAssertion( ) AnnotationAssertion( "XAO:0004325") AnnotationAssertion(Annotation( "XAO:0004325") "branchial head muscle") AnnotationAssertion(Annotation( "GO:0014707") "branchiomeric skeletal muscle") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004164") AnnotationAssertion(rdfs:label "branchiomeric muscle") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "ISBN:0073040584"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (superior reticular formation) AnnotationAssertion( "check ZFA structures superior reticular formation medial column & tegmentum") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004166") AnnotationAssertion(rdfs:label "superior reticular formation") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "GO"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (orbitofrontal cortex) AnnotationAssertion(Annotation( "GO:0021769") Annotation( "MGI:csmith"^^xsd:string) Annotation( "MP:0004170") "The region of the cerebral cortex covering the basal surface of the frontal lobes; this region normally controls emotion and decision making.") AnnotationAssertion(Annotation( "FMA"^^xsd:string) "this is a gyrus in FMA") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:1049") AnnotationAssertion( "DHBA:10194") AnnotationAssertion( "EFO:0001990") AnnotationAssertion( "FMA:242003") AnnotationAssertion(Annotation( "BIRNLEX:1049") "UMLS:C0152301") AnnotationAssertion( "fronto-orbital cortex") AnnotationAssertion(Annotation( "BIRNLEX:1049") Annotation( "DHB:OFC") "orbital frontal cortex") AnnotationAssertion( "orbito-frontal cortex") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:242003") "segment of cortex of frontal lobe") AnnotationAssertion( "UBERON:0004167") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "orbitofrontal cortex") SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) Annotation( "MP"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (spinal cord ventral commissure) AnnotationAssertion(Annotation( ) Annotation( "GO:0021965") Annotation( "MP:0009695") "The band of nerve fibers which cross the midline of the spinal cord ventral to the central canal and posterior grey commissure[MP]. The anterior (or ventral) white commissure, also known as the alba anterior medullae spinalis, is a bundle of nerve fibers which cross the midline of the spinal cord just anterior to the gray commissure. A N4 fibers and C fibers carrying pain sensation in the spinothalamic tract contribute to this commissure, as do fibers of the anterior corticospinal tract, which carry motor signals from the primary motor cortex[WP].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:vc") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37956") AnnotationAssertion( "FMA:77035") AnnotationAssertion( "MBA:858") AnnotationAssertion( "NCIT:C33890") AnnotationAssertion(Annotation( "ncithesaurus:White_Commissure") "UMLS:C1520137") AnnotationAssertion(Annotation( "MP:0009695") "anterior white commissure") AnnotationAssertion(Annotation( "FMA:77035") "anterior white commissure of spinal cord") AnnotationAssertion(Annotation( "MP:0009695") "spinal cord anterior commissure") AnnotationAssertion(Annotation( "MP:0009695") "ventral spinal commissure") AnnotationAssertion(Annotation( "MP:0009695") "ventral white column") AnnotationAssertion(Annotation( "FMA:77035") "ventral white commissure of spinal cord") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "alba anterior medullae spinalis") AnnotationAssertion(Annotation( "MP:0009695") Annotation( ) "anterior commissure") AnnotationAssertion(Annotation( ) Annotation( ) "commissura alba anterior medullae spinalis") AnnotationAssertion(Annotation( "BAMS:vc") "ventral commissure of the spinal cord") AnnotationAssertion(Annotation( "MP:0009695") "white commissure") AnnotationAssertion( "UBERON:0004170") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "spinal cord ventral commissure") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/f/f8/Gray664.png"^^xsd:anyURI) SubClassOf(Annotation( "FMA"^^xsd:string) ) DisjointClasses(Annotation( "lexical"^^xsd:string) ) # Class: (trigeminothalamic tract) AnnotationAssertion(Annotation( "GO:0021974") "The trigeminothalamic tract is one of the major routes of nociceptive and temperature signaling from the face.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:tth") AnnotationAssertion( "BIRNLEX:4097") AnnotationAssertion( "DHBA:12797") AnnotationAssertion( "FMA:83852") AnnotationAssertion(Annotation( "FMA:83852") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "tractus trigeminothalamicus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BIRNLEX:4097") "trigeminal tract") AnnotationAssertion( "UBERON:0004171") AnnotationAssertion(rdfs:label "trigeminothalamic tract") SubClassOf( ) # Class: (pons reticulospinal tract) AnnotationAssertion(Annotation( "GO:0021975") "Axon tract that carries efferent (outgoing) action potentials from the cell body in the pons towards target cells in the spinal cord.") AnnotationAssertion( ) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004172") AnnotationAssertion(rdfs:label "pons reticulospinal tract") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) # Class: (medulla reticulospinal tract) AnnotationAssertion(Annotation( "GO:0021976") "Axon tract that carries efferent (outgoing) action potentials from the cell body in the medulla towards target cells in the spinal cord[GO].") AnnotationAssertion( ) AnnotationAssertion( "FMA:73989") AnnotationAssertion(Annotation( "FMA:73989") "medullary reticulospinal tract") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004173") AnnotationAssertion(rdfs:label "medulla reticulospinal tract") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) # Class: (obsolete leg joint) AnnotationAssertion(Annotation( "GO:0035111") "Joint in the leg. For example the knee, which separates the leg tibia and femur.") AnnotationAssertion( "UBERON:0003657") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "joint of leg") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "joint of lower limb") AnnotationAssertion( "UBERON:0004174") AnnotationAssertion(rdfs:comment "Originally created for consistenct with GO, obsoleted when the GO class was obsoleted as the meaning was unclear") AnnotationAssertion(rdfs:label "obsolete leg joint") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (internal genitalia) AnnotationAssertion(Annotation( "GO:0035260") "The internal genitalia are the internal sex organs such as the uterine tube, the uterus and the vagina in female mammals, and the testis, seminal vesicle, ejaculatory duct and prostate in male mammals.") AnnotationAssertion( "FMA:45652") AnnotationAssertion( "internal genitalia") AnnotationAssertion( "internal genitals") AnnotationAssertion( "uberon") AnnotationAssertion( "internal reproductive organ") AnnotationAssertion( "internal sex organ") AnnotationAssertion( "UBERON:0004175") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "TODO: make a subdivision of reproductive system. Relabel. See https://github.com/obophenotype/uberon/issues/547") AnnotationAssertion(rdfs:label "internal genitalia") SubClassOf( ) # Class: (external genitalia) AnnotationAssertion(Annotation( "GO:0035261") "The external genitalia are the outer sex organs, such as the penis or vulva in mammals.") AnnotationAssertion( ) AnnotationAssertion( "FMA:45643") AnnotationAssertion( "external genitalia") AnnotationAssertion( "uberon") AnnotationAssertion( "external reproductive organ") AnnotationAssertion( "external sex organ") AnnotationAssertion( "UBERON:0004176") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "TODO: make a subdivision of reproductive system. Relabel. See https://github.com/obophenotype/uberon/issues/547") AnnotationAssertion(rdfs:label "external genitalia") SubClassOf( ) # Class: (hemopoietic organ) AnnotationAssertion(Annotation( "GOC:Obol") "Organ that is part of the hematopoietic system.") AnnotationAssertion( "consider splitting out lymph organ, compare with lymph node") AnnotationAssertion(Annotation( ) "the organs in which the formed elements of the blood and lymph are produced[http://encyclopedia2.thefreedictionary.com/Hematopoietic+Organs].") AnnotationAssertion(Annotation( "FMA"^^xsd:string) "the FMA class 'lymphoid organ' is a general anatomical term") AnnotationAssertion( ) AnnotationAssertion( "BTO:0004605") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37665") AnnotationAssertion( "FMA:7143") AnnotationAssertion( "MA:0000747") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "haematological system organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "haemopoietic system organ") AnnotationAssertion( "hematopoeitic organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "hematopoietic system organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "organ of haematological system") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "organ of haemopoietic system") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "organ of hematopoietic system") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "organ of organa haemopoietica") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "organa haemopoietica organ") AnnotationAssertion( "hematopoeitic or lymphoid organ") AnnotationAssertion(Annotation( "MA:0000747") "lymph organ") AnnotationAssertion(Annotation( "BTO:0004605") Annotation( "FMA:7143") "lymphoid organ") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004177") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "hemopoietic organ") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (aorta smooth muscle tissue) AnnotationAssertion(Annotation( "MGI:csmith"^^xsd:string) Annotation( "MP:0009865") "The nonstriated, involuntary muscle tissue located in the wall of the aorta.") AnnotationAssertion( ) AnnotationAssertion( "BTO:0001685") AnnotationAssertion( "CALOHA:TS-0048") AnnotationAssertion( "EFO:0002775") AnnotationAssertion( "EMAPA:35135") AnnotationAssertion( "MA:0000702") AnnotationAssertion( "NCIT:C49191") AnnotationAssertion(Annotation( "ncithesaurus:Aorta_Smooth_Muscle_Tissue") "UMLS:C1706825") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "aorta non-striated muscle") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "aorta smooth muscle") AnnotationAssertion(Annotation( "BTO:0001685") "aortic smooth muscle") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004178") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "aorta smooth muscle tissue") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (prostate glandular acinus) AnnotationAssertion(Annotation( ) Annotation( "GO:0060525") "A saclike structure of the prostate gland, comprised of at least three cell layers: an innermost layer of secretory columnar luminal epithelium, a middle layer of squamous basal epithelium that also contains neuroendocrine cells, transit amplifying cells, and stem cells, and an outer layer of smooth muscle intermixed with other stromal cells.") AnnotationAssertion( "the muscle layer is implicitly treated as outside the acinus") AnnotationAssertion( "Concurrent with branching morphogenesis, the solid cords of epithelium formed by budding arborize and differentiate postnatally into glandular acin. The basic prostate architecture is established by puberty and acquires secretory function thereafter[PMID:18977204]") AnnotationAssertion( "FMA:66808") AnnotationAssertion(Annotation( "FMA:66808") "prostatic acinus") AnnotationAssertion(Annotation( "FMA:66808") "prostatic follicle") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004179") AnnotationAssertion(rdfs:label "prostate glandular acinus") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf(Annotation( "GO"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (mammary gland fat) AnnotationAssertion(Annotation( "GO:0060611") "The mammary fat is an adipose structure in the gland that is invaded by the mammary ducts.") AnnotationAssertion( "EMAPA:35539") AnnotationAssertion( "MA:0002911") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "adipose tissue of lactiferous gland") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "adipose tissue of mammary gland") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "fat tissue of lactiferous gland") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "fat tissue of lobe of breast") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "fat tissue of lobe of mammary gland") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "fat tissue of mammary gland") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "fatty tissue of lactiferous gland") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "fatty tissue of lobe of breast") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "fatty tissue of lobe of mammary gland") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "fatty tissue of mammary gland") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "lactiferous gland adipose tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "lactiferous gland fat tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "lactiferous gland fatty tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "lobe of breast adipose tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "lobe of breast fat tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "lobe of breast fatty tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "lobe of mammary gland adipose tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "lobe of mammary gland fat tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "lobe of mammary gland fatty tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mammary gland adipose tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mammary gland fat tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mammary gland fatty tissue") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004180") AnnotationAssertion(rdfs:label "mammary gland fat") SubClassOf( ) SubClassOf( ) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (mammary gland cord) AnnotationAssertion(Annotation( "MP:0013725") "The solid cord of epithelial cells that emerges from the mammary bud and grows down from the primary mammary mesenchyme and into a second stromal compartment, the fat pad precursor, beneath the dermis.") AnnotationAssertion( "in female mouse embryos, the primary mammary cord (aka 'mammary sprout') is formed between E15.5 and E16.5; once the primary cord reaches the adipocytes of the fat pad (around E16), it begins to branch in a characteristic dichotomous fashion to form the initial ductal tree") AnnotationAssertion( "lactiferous gland cord") AnnotationAssertion( "mammary cord") AnnotationAssertion( "uberon") AnnotationAssertion( "mammary sprout") AnnotationAssertion( "UBERON:0004182") AnnotationAssertion(rdfs:label "mammary gland cord") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (prostate gland stroma) AnnotationAssertion(Annotation( "GO:0060741") "The prostate gland stroma is made up of the mesenchymal or fibroblast cells of the prostate gland.") AnnotationAssertion( "TODO - check also FMA Stroma of glandular part of prostate") AnnotationAssertion( "UBERON:0005084") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:35714") AnnotationAssertion( "FMA:45719") AnnotationAssertion( "MA:0002912") AnnotationAssertion( "NCIT:C13104") AnnotationAssertion(Annotation( "ncithesaurus:Prostatic_Stroma") "UMLS:C1521760") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "prostate stroma") AnnotationAssertion(Annotation( "FMA:45719") "prostatic stroma") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "stroma of prostate") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "stroma of prostate gland") AnnotationAssertion(Annotation( "FMA:74349") Annotation( "OBOL:automatic"^^xsd:string) "stroma of glandular part of prostate") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004184") AnnotationAssertion(rdfs:label "prostate gland stroma") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (endodermal part of digestive tract) AnnotationAssertion(Annotation( "GO:0061031") "A portions of the gut that is derived from endoderm.") AnnotationAssertion( "EMAPA:32930") AnnotationAssertion( "endodermal gut") AnnotationAssertion(Annotation( "EMAPA:32930") "gut endoderm") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004185") AnnotationAssertion(rdfs:label "endodermal part of digestive tract") SubClassOf( ) SubClassOf( ) # Class: (olfactory bulb mitral cell layer) AnnotationAssertion(Annotation( "GO:0061034") "The mitral cell layer is composed of pyramidal neurons whose cell bodies are located between the granule cell layer and the plexiform layer.") AnnotationAssertion(Annotation( "NIF"^^xsd:string) "NIF divides this into main and accessory") AnnotationAssertion( "BAMS:Mi") AnnotationAssertion( "BTO:0001108") AnnotationAssertion( "DHBA:11329") AnnotationAssertion( "DMBA:15912") AnnotationAssertion( "EMAPA:35611") AnnotationAssertion( "MA:0000973") AnnotationAssertion( "NLXANAT:100201") AnnotationAssertion(Annotation( "DMBA:OB") "OB mitral cell layer") AnnotationAssertion(Annotation( "NLXANAT:100201") "mitral cell body layer") AnnotationAssertion(Annotation( "BTO:0001108") "mitral cell layer") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BAMS:Mi") "mitral cell layer of the olfactory bulb") AnnotationAssertion(Annotation( "NLXANAT:100201") "olfactory bulb main mitral cell body layer") AnnotationAssertion( "UBERON:0004186") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "olfactory bulb mitral cell layer") SubClassOf( ) # Class: (glomerular epithelium) AnnotationAssertion(Annotation( "GO:0072010") "The glomerular epithelium is an epithelial tissue that covers the outer surfaces of the glomerulus. The glomerular epithelium consists of both parietal and visceral epithelium. Metanephric glomerular parietal epithelial cells are specialized epithelial cells that form tight junctions as a barrier to protein transport. A metanephric glomerular visceral epithelial cell is a specialized epithelial cell that contains 'feet' that interdigitate with the 'feet' of other glomerular epithelial cells in the metanephros.") AnnotationAssertion( "TODO - check - GO says outer, BTO says inner. Make this a superclass") AnnotationAssertion( "BTO:0001515") AnnotationAssertion( "EMAPA:35458") AnnotationAssertion( "MA:0002847") AnnotationAssertion( "epithelium of glomerulus") AnnotationAssertion( "epithelium of kidney glomerulus") AnnotationAssertion( "epithelium of renal glomerulus") AnnotationAssertion(Annotation( "MA:0002847") "kidney glomerular epithelium") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0001515") "glomerular epithelial cell") AnnotationAssertion( "UBERON:0004188") AnnotationAssertion(rdfs:label "glomerular epithelium") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (glomerular endothelium) AnnotationAssertion(Annotation( "GO:0072011") "The glomerular endothelium is an epithelial tissue that covers the internal surfaces of the glomerulus.") AnnotationAssertion( "BTO:0004631") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "endothelium of renal glomerulus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "renal glomerulus endothelium") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004189") AnnotationAssertion(rdfs:label "glomerular endothelium") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (renal glomerulus vasculature) AnnotationAssertion(Annotation( "GO:0072012") "The glomerulus vasculature is composed of the tubule structures that carry blood or lymph in the glomerulus.") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "glomerulus vasculature") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "renal glomerulus vascular network") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "renal glomerulus vasculature") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "vascular network of renal glomerulus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "vasculature of renal glomerulus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004190") AnnotationAssertion(rdfs:label "renal glomerulus vasculature") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (loop of Henle ascending limb thin segment) AnnotationAssertion(Annotation( ) Annotation( "GO:0072021") "A sub-portion of the loop of Henle in the nephron of the kidney that is permeable to ions but not to water.") AnnotationAssertion( "check relationship to distal tubule") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:28328") AnnotationAssertion( "EMAPA:28361") AnnotationAssertion( "FMA:17720") AnnotationAssertion( "MA:0001678") AnnotationAssertion( "ascending limb thin segment of loop of Henle") AnnotationAssertion(Annotation( "FMA:17720") "ascending thin limb") AnnotationAssertion(Annotation( "FMA:17720") "pars ascendens (tubulus attenuatus)") AnnotationAssertion(Annotation( "EMAPA:28328") "thin ascending limb") AnnotationAssertion( "thin ascending limb of loop of Henle") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004193") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "loop of Henle ascending limb thin segment") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/0/02/Gray1128.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (long nephron) AnnotationAssertion(Annotation( "GO:0072029") "Long nephrons are associated with juxtamedullary glomeruli and extend to the inner medulla.") AnnotationAssertion( ) AnnotationAssertion( "FMA:272054") AnnotationAssertion( "NCIT:C32892") AnnotationAssertion(Annotation( "ncithesaurus:Juxtamedullary_Nephron") "UMLS:C1517630") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( "GO:0072029") "juxtamedullary nephron") AnnotationAssertion( "UBERON:0004194") AnnotationAssertion(rdfs:label "long nephron") SubClassOf( ) # Class: (short nephron) AnnotationAssertion(Annotation( "GO:0072030") "Short nephrons are associated with mid-cortical glomeruli, and have no short ascending limb, so the limb is situated in the outer medulla.") AnnotationAssertion( "FMA:272051") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004195") AnnotationAssertion(rdfs:label "short nephron") SubClassOf( ) # Class: (proximal convoluted tubule segment 1) AnnotationAssertion(Annotation( ) Annotation( "GO:0072031") "The S1 portion is the initial portion of the proximal convoluted tubule and is responsible for avid reabsorption of water and solutes[GO].") AnnotationAssertion( "UBERON:0006432") AnnotationAssertion(Annotation( "GO:0072031") "S1") AnnotationAssertion( "EMAPA:29657") AnnotationAssertion( "MA:0002612") AnnotationAssertion( "S1 portion of renal tubule") AnnotationAssertion( "S1 portion of tubule") AnnotationAssertion(Annotation( "MA:0002612") "proximal tubule segment 1") AnnotationAssertion(Annotation( "EMAPA:29657") "segment 1 of proximal tubule") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004196") AnnotationAssertion(rdfs:label "proximal convoluted tubule segment 1") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "GO"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (proximal convoluted tubule segment 2) AnnotationAssertion(Annotation( "GO:0072032") "The S2 portion of the tubule is involved in reabsorption of water and sodium chloride[GO].") AnnotationAssertion( "UBERON:0006433") AnnotationAssertion(Annotation( "GO:0072032") "S2") AnnotationAssertion( "EMAPA:29659") AnnotationAssertion( "MA:0002613") AnnotationAssertion( "S2 portion of renal tubule") AnnotationAssertion( "S2 portion of tubule") AnnotationAssertion(Annotation( "MA:0002613") "proximal tubule segment 2") AnnotationAssertion(Annotation( "EMAPA:29659") "segment 2 of proximal tubule") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004197") AnnotationAssertion(rdfs:label "proximal convoluted tubule segment 2") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "GO"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (comma-shaped body) AnnotationAssertion(Annotation( "GO:0072049") "The comma-shaped body is the precursor structure to the S-shaped body that contributes to the morphogenesis of the nephron.") AnnotationAssertion( "EMAPA:27681") AnnotationAssertion( "ZFA:0005588") AnnotationAssertion(Annotation( ) "CSB") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004198") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "comma-shaped body") SubClassOf( ) SubClassOf(Annotation( "cjm"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "ZFA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (S-shaped body) AnnotationAssertion(Annotation( "GO:0072050") "The S-shaped body is the successor of the comma-shaped body that contributes to the morphogenesis of the nephron.") AnnotationAssertion( "TODO") AnnotationAssertion( "EMAPA:27756") AnnotationAssertion( "ZFA:0005589") AnnotationAssertion(Annotation( ) "SSB") AnnotationAssertion(Annotation( ) "stage II nephron") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004199") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "S-shaped body") SubClassOf( ) SubClassOf(Annotation( "cjm"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "GO"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (kidney pyramid) AnnotationAssertion(Annotation( ) Annotation( "GO:0072056") "Kidney pyramids are the conical arrangements of tubules that constitute the renal medulla in a multi-lobed mammalian kidney; they contain the loops of Henle and the medullary collecting ducts.") AnnotationAssertion(Annotation( "FMA"^^xsd:string) "not the same as FMA:50609 Pyramid (which is a volume / dimensional entity)") AnnotationAssertion( ) AnnotationAssertion( "UBERON:0002449") AnnotationAssertion( "UBERON:0005098") AnnotationAssertion(Annotation( "GO:0072056") "pyramid") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0003926") AnnotationAssertion( "FMA:258870") AnnotationAssertion( "MA:0001654") AnnotationAssertion( "NCIT:C12886") AnnotationAssertion( "NCIT:C33436") AnnotationAssertion(Annotation( "ncithesaurus:Renal_Pyramid") "UMLS:C0227629") AnnotationAssertion(Annotation( "ncithesaurus:Pyramid_of_Malpighi") "UMLS:C1514613") AnnotationAssertion(Annotation( ) "Malpighian pyramid") AnnotationAssertion(Annotation( ) "renal pyramid") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0003926") Annotation( ) "Malphigian pyramid") AnnotationAssertion( "Malpighian pyramid") AnnotationAssertion( "medullary pyramid") AnnotationAssertion(Annotation( "ncithesaurus:Pyramid_of_Malpighi") Annotation( ) "pyramid of Malphigi") AnnotationAssertion(Annotation( "UBERON:cjm"^^xsd:string) "pyramid of Malpighi") AnnotationAssertion(Annotation( ) Annotation( ) "pyramides renales") AnnotationAssertion(Annotation( "BTO:0003926") "pyramis renalis") AnnotationAssertion(Annotation( "FMA:258870") "renal medullary region") AnnotationAssertion( "UBERON:0004200") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "kidney pyramid") AnnotationAssertion( "Kidney:PioM.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses( ) # Class: (kidney outer medulla inner stripe) AnnotationAssertion(Annotation( "GO:0072057") "The inner stripe is a deep, centrally located portion of the renal outer medulla and is traversed by thick and thin portions of nephron tubules.") AnnotationAssertion( "EMAPA:29675") AnnotationAssertion( "FMA:76663") AnnotationAssertion( "MA:0002626") AnnotationAssertion(Annotation( "GO:0072057") "inner stripe") AnnotationAssertion(Annotation( "FMA:76663") "inner stripe of medulla of kidney") AnnotationAssertion(Annotation( "EMAPA:29675") "inner stripe of outer medulla") AnnotationAssertion(Annotation( "FMA:76663") "inner stripe of renal medulla") AnnotationAssertion(Annotation( "MA:0002626") "outer medulla inner stripe") AnnotationAssertion(Annotation( "FMA:76663") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "stria interna medullae renalis") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004201") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "kidney outer medulla inner stripe") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (kidney outer medulla outer stripe) AnnotationAssertion(Annotation( "GO:0072058") "The outer stripe is the region of the kidney that lies distal to the line of termination of the straight renal tubules.") AnnotationAssertion( "EMAPA:29663") AnnotationAssertion( "FMA:76662") AnnotationAssertion( "MA:0002629") AnnotationAssertion(Annotation( "MA:0002629") "outer medulla outer stripe") AnnotationAssertion(Annotation( "GO:0072058") "outer stripe") AnnotationAssertion(Annotation( "FMA:76662") "outer stripe of medulla of kidney") AnnotationAssertion(Annotation( "EMAPA:29663") "outer stripe of outer medulla") AnnotationAssertion(Annotation( "FMA:76662") "outer stripe of renal medulla") AnnotationAssertion(Annotation( "FMA:76662") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "stria externa medullae renalis") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004202") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "kidney outer medulla outer stripe") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (cortical collecting duct) AnnotationAssertion(Annotation( "GO:0072059") "The cortical collecting duct is the portion of the collecting duct that resides in the renal cortex.") AnnotationAssertion( "UBERON:0005267") AnnotationAssertion( "BTO:0002643") AnnotationAssertion( "EMAPA:28130") AnnotationAssertion( "MA:0002600") AnnotationAssertion(Annotation( "MA:0002600") "kidney cortex collecting duct") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "MA:0002600") "renal cortex collecting duct") AnnotationAssertion( "UBERON:0004203") AnnotationAssertion(rdfs:label "cortical collecting duct") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (outer medullary collecting duct) AnnotationAssertion(Annotation( "GO:0072060") "The outer medullary collecting duct is the portion of the collecting duct that lies in the renal outer medulla.") AnnotationAssertion( "UBERON:0005186") AnnotationAssertion( "EMAPA:28346") AnnotationAssertion( "MA:0002599") AnnotationAssertion(Annotation( "MA:0002599") "kidney outer medulla collecting duct") AnnotationAssertion(Annotation( "MA:0002599") "outer renal medulla collecting duct") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004204") AnnotationAssertion(rdfs:label "outer medullary collecting duct") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (inner medullary collecting duct) AnnotationAssertion(Annotation( "GO:0072061") "The inner medullary collecting duct is the portion of the collecting duct that lies in the renal inner medulla.") AnnotationAssertion( "UBERON:0005187") AnnotationAssertion( "BTO:0004544") AnnotationAssertion( "EMAPA:28370") AnnotationAssertion( "MA:0002598") AnnotationAssertion(Annotation( "MA:0002598") "inner renal medulla collecting duct") AnnotationAssertion(Annotation( "MA:0002598") "kidney inner medulla collecting duct") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "MA:0002598") "papillary collecting duct") AnnotationAssertion( "UBERON:0004205") AnnotationAssertion(rdfs:label "inner medullary collecting duct") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (long descending thin limb bend) AnnotationAssertion(Annotation( "GO:0072065") "The long descending thin limb bend is a part of the descending thin limb of a long nephron that lies beyond the prebend segment.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004206") AnnotationAssertion(rdfs:label "long descending thin limb bend") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (prebend segment of loop of Henle) AnnotationAssertion(Annotation( "GO:0072066") "The prebend segment is a part of the descending thin limb that lies before the bend and exhibits robust sodium chloride reabsorption.") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "GO:0072066") "prebend segment") AnnotationAssertion( "UBERON:0004207") AnnotationAssertion(rdfs:label "prebend segment of loop of Henle") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "GO"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (nephrogenic mesenchyme) AnnotationAssertion(Annotation( "GO:0072076") "Nephrogenic mesenchyme is the tissue made up of loosely connected mesenchymal cells in the nephron.") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mesenchyme of nephron") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "nephron mesenchyme") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004208") AnnotationAssertion(rdfs:comment "The detailed events associated with the differentiation of the nephrogenic mesenchyme are somewhat complex. It has been suggested that each terminal branch of the ureteric bud stimulates the associated cap mesenchyme tissue to form a renal vesicle (the most primitive stage of nephron development: a stage I nephron). This then elongates, becomes a comma-shaped and then an S-shaped body (stage II nephron), and makes contact with and fuses with the distal component of the ureteric bud. The latter then forms the collecting duct. One fold of the S-shaped body gives rise to Bowman's capsule (also termed the glomerular capsule). Soon afterwards, endothelial cells invade to make a capillary knot-like outgrowth, the glomerular tuft, which goes on to form the glomerulus. The inner epithelial layer of the Bowman's capsule (also called the visceral epithelium, or podocyte layer because it consists of podocytes) is closely apposed to the endothelial glomerulus. Together, the Bowman's capsule and the glomerulus comprise the definitive renal corpuscle. The rest of the nephron elongates to form components of the proximal tubule, the loop of Henle and the distal tubule. The distal pole of the developing nephron connects to the ureteric bud that induced it at an early stage of nephron/ collecting duct development, before differentiation of the proximal tubule, the loop of Henle and the distal tubule are complete. This connection allows the excretory products produced by the kidney to be removed and subsequently transferred, via the ureter, into the bladder where they are stored until it is appropriate to empty the bladder. [http://www.gudmap.org/About/Tutorial/DevMUS.html#DMK_Nephron]") AnnotationAssertion(rdfs:label "nephrogenic mesenchyme") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (renal vesicle) AnnotationAssertion(Annotation( "GO:0072077") "The renal vesicle is the primordial structure of the nephron epithelium, and is formed by the condensation of mesenchymal cells.") AnnotationAssertion( "note that this class includes both metanephric and mesonephric vesicles - ZFA and EHDAA2 associations are placed with these classes. TODO - make a more specific develops_from relationship - see UBERON:0005107 ! metanephric cap") AnnotationAssertion(Annotation( ) Annotation( "ZFA:0005586") "stage I nephron") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004209") AnnotationAssertion(rdfs:label "renal vesicle") SubClassOf(Annotation( "EHDAA2"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (nephron epithelium) AnnotationAssertion(Annotation( "GO:0072088") "The nephron epithelium is a tissue that covers the surface of a nephron.") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelial tissue of nephron") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelium of nephron") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "nephron epithelial tissue") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004211") AnnotationAssertion(rdfs:label "nephron epithelium") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (glomerular capillary) AnnotationAssertion(Annotation( "MGI:csmith"^^xsd:string) Annotation( "MP:0011320") "The small branching blood vessels in the kidney glomerulus that receives blood from the kidney afferent arterioles; these capillaries are under high pressure for filtering within the glomerulus.") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0005284") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:ZDB-PUB-000824-1") Annotation( "ZFIN:curator"^^xsd:string) "Capillary that is part of the renal glomerulus. Glomerular capillary endothelial membranes in zebrafish normally have a fenestrated morphology that is visible at the ultrastructural level.[TAO]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:28245") AnnotationAssertion( "FMA:274259") AnnotationAssertion( "MA:0002587") AnnotationAssertion( "NCIT:C32684") AnnotationAssertion( "TAO:0005284") AnnotationAssertion(Annotation( "ncithesaurus:Glomerular_Capillary") "UMLS:C0226356") AnnotationAssertion( "ZFA:0005284") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "blood capillary of renal glomerulus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "capillary of renal glomerulus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "capillary vessel of renal glomerulus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "renal glomerulus blood capillary") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "renal glomerulus capillary") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "renal glomerulus capillary vessel") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "glomerular capillaries") AnnotationAssertion(Annotation( "MA:0002587") "glomerular capillary system") AnnotationAssertion( "UBERON:0004212") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "glomerular capillary") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (upper leg nerve) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A nerve that is part of a hindlimb stylopod [Automatically generated definition].") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37344") AnnotationAssertion( "MA:0000685") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "hind limb stylopod nerve") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "hindlimb stylopod nerve") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "lower extremity stylopod nerve") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "thigh RELATED") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004214") AnnotationAssertion(rdfs:label "upper leg nerve") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (back nerve) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A nerve that is part of a back [Automatically generated definition].") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37268") AnnotationAssertion( "MA:0000497") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "nerve of back") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004215") AnnotationAssertion(rdfs:label "back nerve") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lower arm nerve) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A nerve that is part of a lower arm [Automatically generated definition].") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37338") AnnotationAssertion( "MA:0000601") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004216") AnnotationAssertion(rdfs:label "lower arm nerve") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (upper arm nerve) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A nerve that is part of a forelimb stylopod [Automatically generated definition].") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37337") AnnotationAssertion( "MA:0000607") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004217") AnnotationAssertion(rdfs:label "upper arm nerve") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lower leg nerve) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A nerve that is part of a lower leg [Automatically generated definition].") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37345") AnnotationAssertion( "MA:0000679") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004218") AnnotationAssertion(rdfs:label "lower leg nerve") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (urethra smooth muscle layer) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A portion of smooth muscle tissue that is part of a urethra [Automatically generated definition].") AnnotationAssertion( "EMAPA:36630") AnnotationAssertion( "FMA:76909") AnnotationAssertion( "MA:0001691") AnnotationAssertion(Annotation( "FMA:76909") "muscle layer of urethra") AnnotationAssertion(Annotation( "FMA:76909") "muscular coat of urethra") AnnotationAssertion(Annotation( "FMA:76909") "muscular layer of urethra") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "smooth muscle of urethra") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "smooth muscle tissue of urethra") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) Annotation( ) "tunica muscularis urethrae") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "urethra smooth muscle tissue") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "MA:0001691") "urethral smooth muscle") AnnotationAssertion( "UBERON:0004219") AnnotationAssertion(rdfs:label "urethra smooth muscle layer") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (large intestine smooth muscle) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A portion of smooth muscle tissue that is part of a large intestine [Automatically generated definition].") AnnotationAssertion(Annotation( "MA"^^xsd:string) "MA class may specifically mean muscle layer, but we treat as the sum of smooth muscle in both muscle layer and muscularis mucosa") AnnotationAssertion( "EMAPA:35469") AnnotationAssertion( "MA:0001547") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "involuntary muscle of large intestine") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "large intestine involuntary muscle") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "large intestine non-striated muscle") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "large intestine smooth muscle tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "non-striated muscle of large intestine") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "smooth muscle of large intestine") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "smooth muscle tissue of large intestine") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004220") AnnotationAssertion(rdfs:label "large intestine smooth muscle") SubClassOf( ) SubClassOf(Annotation( "MA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "consider merging") ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) # Class: (intestine smooth muscle) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A portion of smooth muscle tissue that is part of a intestine [Automatically generated definition].") AnnotationAssertion(Annotation( "MA"^^xsd:string) "MA class may specifically mean muscle layer, but we treat as the sum of smooth muscle in both muscle layer and muscularis mucosa") AnnotationAssertion( ) AnnotationAssertion( "BTO:0000643") AnnotationAssertion( "EMAPA:35441") AnnotationAssertion( "EMAPA:35443") AnnotationAssertion( "MA:0001539") AnnotationAssertion( "NCIT:C49243") AnnotationAssertion(Annotation( "ncithesaurus:Intestinal_Smooth_Muscle_Tissue") "UMLS:C1708547") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bowel involuntary muscle") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bowel non-striated muscle") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bowel smooth muscle") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bowel smooth muscle tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "intestine involuntary muscle") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "intestine non-striated muscle") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "intestine smooth muscle tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "involuntary muscle of bowel") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "involuntary muscle of intestine") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "non-striated muscle of bowel") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "non-striated muscle of intestine") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "smooth muscle of bowel") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "smooth muscle of intestine") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "smooth muscle tissue of bowel") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "smooth muscle tissue of intestine") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "EMAPA:35441") "intestinal muscularis") AnnotationAssertion(Annotation( "BTO:0000643") "intestinal smooth muscle") AnnotationAssertion( "UBERON:0004221") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "intestine smooth muscle") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "consider merging") ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) SubClassOf( ObjectSomeValuesFrom( )) # Class: (stomach smooth muscle) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A portion of smooth muscle tissue that is part of a stomach [Automatically generated definition].") AnnotationAssertion( "BTO:0001818") AnnotationAssertion( "EMAPA:35823") AnnotationAssertion( "MA:0001627") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "involuntary muscle of stomach") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "involuntary muscle of ventriculus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "non-striated muscle of stomach") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "non-striated muscle of ventriculus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "smooth muscle of stomach") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "smooth muscle of ventriculus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "smooth muscle tissue of stomach") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "smooth muscle tissue of ventriculus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "stomach involuntary muscle") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "stomach non-striated muscle") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "stomach smooth muscle tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "ventriculus involuntary muscle") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "ventriculus non-striated muscle") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "ventriculus smooth muscle") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "ventriculus smooth muscle tissue") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0001818") "gastric muscle") AnnotationAssertion(Annotation( "MA:0001627") "gastric smooth muscle") AnnotationAssertion(Annotation( "BTO:0001818") "stomach muscle") AnnotationAssertion( "UBERON:0004222") AnnotationAssertion(rdfs:label "stomach smooth muscle") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (vagina smooth muscle) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A portion of smooth muscle tissue that is part of a vagina [Automatically generated definition].") AnnotationAssertion( "BTO:0004999") AnnotationAssertion( "EMAPA:30997") AnnotationAssertion( "MA:0001733") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "involuntary muscle of vagina") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "non-striated muscle of vagina") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "smooth muscle of vagina") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "smooth muscle tissue of vagina") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "vagina involuntary muscle") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "vagina non-striated muscle") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "vagina smooth muscle tissue") AnnotationAssertion(Annotation( "BTO:0004999") "vaginal smooth muscle") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0004999") "vagina smooth muscle") AnnotationAssertion( "UBERON:0004223") AnnotationAssertion(rdfs:label "vagina smooth muscle") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (muscular coat of vas deferens) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A muscular coat that is part of a vas deferens [Automatically generated definition].") AnnotationAssertion( "TODO - check MA and FMA classes mean the same thing") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:29270") AnnotationAssertion( "FMA:19239") AnnotationAssertion( "MA:0001750") AnnotationAssertion(Annotation( "FMA:19239") "muscle layer of deferent duct") AnnotationAssertion(Annotation( "FMA:19239") "muscle layer of ductus deferens") AnnotationAssertion(Annotation( "FMA:19239") "muscle layer of vas deferens") AnnotationAssertion(Annotation( "FMA:19239") "muscular coat of ductus deferens") AnnotationAssertion(Annotation( "FMA:19239") "muscular layer of ductus deferens") AnnotationAssertion(Annotation( "FMA:19239") "muscularis of vas deferens") AnnotationAssertion(Annotation( "FMA:19239") "tunica muscularis (ductus deferens)") AnnotationAssertion(Annotation( "FMA:19239") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "tunica muscularis ductus deferentis") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004224") AnnotationAssertion(rdfs:label "muscular coat of vas deferens") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (respiratory system smooth muscle) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A portion of smooth muscle tissue that is part of a respiratory system [Automatically generated definition].") AnnotationAssertion( "BTO:0001660") AnnotationAssertion( "EMAPA:35734") AnnotationAssertion( "MA:0001830") AnnotationAssertion(Annotation( "BTO:0001660") "respiratory smooth muscle") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "smooth muscle of respiratory system") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0001660") "airway smooth muscle") AnnotationAssertion(Annotation( "BTO:0001660") "airway smooth muscle cell") AnnotationAssertion( "UBERON:0004225") AnnotationAssertion(rdfs:label "respiratory system smooth muscle") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (gastrointestinal system smooth muscle) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A portion of smooth muscle tissue that is part of a digestive system [Automatically generated definition].") AnnotationAssertion( "EMAPA:35117") AnnotationAssertion( "MA:0001523") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "smooth muscle tissue of gastrointestinal system") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004226") AnnotationAssertion(rdfs:label "gastrointestinal system smooth muscle") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (kidney pelvis smooth muscle) AnnotationAssertion(Annotation( "MGI:csmith"^^xsd:string) Annotation( "MP:0011335") "The smooth muscle tissue surrounding the urothelium of the kidney pelvis.") AnnotationAssertion( "EMAPA:28120") AnnotationAssertion( "FMA:262022") AnnotationAssertion( "MA:0002631") AnnotationAssertion(Annotation( "EMAPA:28120") "kidney pelvis smooth muscle") AnnotationAssertion(Annotation( "EMAPA:28120") "renal pelvis smooth muscle") AnnotationAssertion(Annotation( "FMA:262022") "smooth muscle tissue of renal pelvis") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "EMAPA:28120") "pelvic smooth muscle") AnnotationAssertion( "UBERON:0004227") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "kidney pelvis smooth muscle") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (urinary bladder smooth muscle) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A portion of smooth muscle tissue that is part of a urinary bladder [Automatically generated definition].") AnnotationAssertion( "BTO:0001849") AnnotationAssertion( "CALOHA:TS-1087") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37791") AnnotationAssertion( "MA:0001697") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bladder involuntary muscle") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bladder non-striated muscle") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bladder smooth muscle") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bladder smooth muscle tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "involuntary muscle of bladder") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "involuntary muscle of urinary bladder") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "non-striated muscle of bladder") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "non-striated muscle of urinary bladder") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "smooth muscle of bladder") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "smooth muscle of urinary bladder") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "smooth muscle tissue of bladder") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "smooth muscle tissue of urinary bladder") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "urinary bladder involuntary muscle") AnnotationAssertion(Annotation( "MA:0001697") "urinary bladder muscle") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "urinary bladder non-striated muscle") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "urinary bladder smooth muscle tissue") AnnotationAssertion( "uberon") AnnotationAssertion( "smooth muscle layer of bladder") AnnotationAssertion( "UBERON:0004228") AnnotationAssertion(rdfs:label "urinary bladder smooth muscle") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (urinary bladder trigone smooth muscle) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A portion of smooth muscle tissue that is part of a trigone of urinary bladder [Automatically generated definition].") AnnotationAssertion( "EMAPA:28649") AnnotationAssertion( "MA:0001700") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "Lieutaud's trigone involuntary muscle") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "Lieutaud's trigone non-striated muscle") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "Lieutaud's trigone smooth muscle") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "Lieutaud's trigone smooth muscle tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "deep trigone involuntary muscle") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "deep trigone non-striated muscle") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "deep trigone smooth muscle") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "deep trigone smooth muscle tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "involuntary muscle of Lieutaud's trigone") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "involuntary muscle of deep trigone") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "involuntary muscle of trigone of bladder") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "involuntary muscle of trigone of urinary bladder") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "involuntary muscle of urinary bladder trigone") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "involuntary muscle of vesical trigone") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "non-striated muscle of Lieutaud's trigone") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "non-striated muscle of deep trigone") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "non-striated muscle of trigone of bladder") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "non-striated muscle of trigone of urinary bladder") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "non-striated muscle of urinary bladder trigone") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "non-striated muscle of vesical trigone") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "smooth muscle of Lieutaud's trigone") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "smooth muscle of deep trigone") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "smooth muscle of trigone of bladder") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "smooth muscle of trigone of urinary bladder") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "smooth muscle of urinary bladder trigone") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "smooth muscle of vesical trigone") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "smooth muscle tissue of Lieutaud's trigone") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "smooth muscle tissue of deep trigone") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "smooth muscle tissue of trigone of bladder") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "smooth muscle tissue of trigone of urinary bladder") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "smooth muscle tissue of urinary bladder trigone") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "smooth muscle tissue of vesical trigone") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "trigone of bladder involuntary muscle") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "trigone of bladder non-striated muscle") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "trigone of bladder smooth muscle") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "trigone of bladder smooth muscle tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "trigone of urinary bladder involuntary muscle") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "trigone of urinary bladder non-striated muscle") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "trigone of urinary bladder smooth muscle") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "trigone of urinary bladder smooth muscle tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "urinary bladder trigone involuntary muscle") AnnotationAssertion(Annotation( "MA:0001700") "urinary bladder trigone muscle") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "urinary bladder trigone non-striated muscle") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "urinary bladder trigone smooth muscle tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "vesical trigone involuntary muscle") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "vesical trigone non-striated muscle") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "vesical trigone smooth muscle") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "vesical trigone smooth muscle tissue") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004229") AnnotationAssertion(rdfs:label "urinary bladder trigone smooth muscle") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (urinary bladder neck smooth muscle) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A portion of smooth muscle tissue that is part of a neck of urinary bladder [Automatically generated definition].") AnnotationAssertion( "EMAPA:30123") AnnotationAssertion( "FMA:67990") AnnotationAssertion( "MA:0001699") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bladder neck involuntary muscle") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bladder neck non-striated muscle") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bladder neck smooth muscle") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bladder neck smooth muscle tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "involuntary muscle of bladder neck") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "involuntary muscle of neck of bladder") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "involuntary muscle of neck of urinary bladder") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "involuntary muscle of urinary bladder neck") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "involuntary muscle of vesical neck") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "neck of bladder involuntary muscle") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "neck of bladder non-striated muscle") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "neck of bladder smooth muscle") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "neck of bladder smooth muscle tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "neck of urinary bladder involuntary muscle") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "neck of urinary bladder non-striated muscle") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "neck of urinary bladder smooth muscle") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "neck of urinary bladder smooth muscle tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "non-striated muscle of bladder neck") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "non-striated muscle of neck of bladder") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "non-striated muscle of neck of urinary bladder") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "non-striated muscle of urinary bladder neck") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "non-striated muscle of vesical neck") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "smooth muscle of bladder neck") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "smooth muscle of neck of bladder") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "smooth muscle of neck of urinary bladder") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "smooth muscle of urinary bladder neck") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "smooth muscle of vesical neck") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "smooth muscle tissue of bladder neck") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "smooth muscle tissue of neck of bladder") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "smooth muscle tissue of neck of urinary bladder") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "smooth muscle tissue of urinary bladder neck") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "smooth muscle tissue of vesical neck") AnnotationAssertion(Annotation( "FMA:67990") "trigonal muscle") AnnotationAssertion(Annotation( "FMA:67990") "trigonal muscle of urinary bladder") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "urinary bladder neck involuntary muscle") AnnotationAssertion(Annotation( "MA:0001699") "urinary bladder neck muscle") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "urinary bladder neck non-striated muscle") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "urinary bladder neck smooth muscle tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "vesical neck involuntary muscle") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "vesical neck non-striated muscle") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "vesical neck smooth muscle") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "vesical neck smooth muscle tissue") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004230") AnnotationAssertion(rdfs:label "urinary bladder neck smooth muscle") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (anal region smooth muscle) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A portion of smooth muscle tissue that is part of an anal region [Automatically generated definition].") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37394") AnnotationAssertion( "MA:0001532") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "anal part of perineum involuntary muscle") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "anal part of perineum non-striated muscle") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "anal part of perineum smooth muscle") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "anal part of perineum smooth muscle tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "anal region involuntary muscle") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "anal region non-striated muscle") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "anal region smooth muscle tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "anal triangle involuntary muscle") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "anal triangle non-striated muscle") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "anal triangle smooth muscle") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "anal triangle smooth muscle tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "involuntary muscle of anal part of perineum") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "involuntary muscle of anal region") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "involuntary muscle of anal triangle") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "non-striated muscle of anal part of perineum") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "non-striated muscle of anal region") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "non-striated muscle of anal triangle") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "smooth muscle of anal part of perineum") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "smooth muscle of anal region") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "smooth muscle of anal triangle") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "smooth muscle tissue of anal part of perineum") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "smooth muscle tissue of anal region") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "smooth muscle tissue of anal triangle") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004231") AnnotationAssertion(rdfs:label "anal region smooth muscle") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lymphatic vessel smooth muscle) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A portion of smooth muscle tissue that is part of a lymphatic vessel [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:36313") AnnotationAssertion( "FMA:262026") AnnotationAssertion( "MA:0000751") AnnotationAssertion( "NCIT:C49260") AnnotationAssertion(Annotation( "ncithesaurus:Lymphatic_Vessel_Smooth_Muscle_Tissue") "UMLS:C1708791") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "involuntary muscle of lymph vessel") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "involuntary muscle of lymphatic vessel") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "lymph vessel involuntary muscle") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "lymph vessel non-striated muscle") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "lymph vessel smooth muscle") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "lymph vessel smooth muscle tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "lymphatic vessel involuntary muscle") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "lymphatic vessel non-striated muscle") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "lymphatic vessel smooth muscle tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "non-striated muscle of lymph vessel") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "non-striated muscle of lymphatic vessel") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "smooth muscle of lymph vessel") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "smooth muscle of lymphatic vessel") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "smooth muscle tissue of lymph vessel") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "smooth muscle tissue of lymphatic vessel") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004232") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "lymphatic vessel smooth muscle") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lower respiratory tract smooth muscle) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A portion of smooth muscle tissue that is part of a lower respiratory tract [Automatically generated definition].") AnnotationAssertion( "EMAPA:35520") AnnotationAssertion( "MA:0002410") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "involuntary muscle of lower respiratory tract") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "lower respiratory tract involuntary muscle") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "lower respiratory tract non-striated muscle") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "lower respiratory tract smooth muscle tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "non-striated muscle of lower respiratory tract") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "smooth muscle of lower respiratory tract") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "smooth muscle tissue of lower respiratory tract") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004233") AnnotationAssertion(rdfs:label "lower respiratory tract smooth muscle") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (iris smooth muscle) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A portion of smooth muscle tissue that is part of a iris [Automatically generated definition].") AnnotationAssertion( "see notes for muscle of iris.") AnnotationAssertion( "BTO:0000655") AnnotationAssertion( "EMAPA:35448") AnnotationAssertion( "FMA:312338") AnnotationAssertion( "MA:0001270") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "involuntary muscle of iris") AnnotationAssertion(Annotation( ) "iridial smooth muscle") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "iris involuntary muscle") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "iris non-striated muscle") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "iris smooth muscle tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "non-striated muscle of iris") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "smooth muscle of iris") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "smooth muscle tissue of iris") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004234") AnnotationAssertion(rdfs:label "iris smooth muscle") SubClassOf(Annotation( "MA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (mammary gland smooth muscle) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A portion of smooth muscle tissue that is part of a mammary gland [Automatically generated definition].") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37669") AnnotationAssertion( "MA:0000795") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "smooth muscle tissue of mammary gland") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004235") AnnotationAssertion(rdfs:label "mammary gland smooth muscle") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (arteriole smooth muscle) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A portion of smooth muscle tissue that is part of an arteriole [Automatically generated definition].") AnnotationAssertion( "EMAPA:36287") AnnotationAssertion( "FMA:312251") AnnotationAssertion( "MA:0000706") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004236") AnnotationAssertion(rdfs:label "arteriole smooth muscle") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (blood vessel smooth muscle) AnnotationAssertion(Annotation( ) "Smooth muscle found within, and composing the majority of the wall of blood vessels.") AnnotationAssertion( "Vascular smooth muscle contracts or relaxes to both change the volume of blood vessels and the local blood pressure, a mechanism that is responsible for the redistribution of the blood within the body to areas where it is needed (i.e. areas with temporarily enhanced oxygen consumption). Thus the main function of vascular smooth muscle tonus is to regulate the caliber of the blood vessels in the body. Excessive vasoconstriction leads to hypertension, while excessive vasodilation as in shock leads to hypotension.") AnnotationAssertion( "UBERON:0010508") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0001431") AnnotationAssertion( "CALOHA:TS-1107") AnnotationAssertion( "EMAPA:35177") AnnotationAssertion( "MA:0000710") AnnotationAssertion( "MESH:D009131") AnnotationAssertion( "NCIT:C33853") AnnotationAssertion( "TAO:0005321") AnnotationAssertion(Annotation( "ncithesaurus:Vascular_Smooth_Muscle_Tissue") "UMLS:C1519956") AnnotationAssertion( "ZFA:0005321") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "blood vessel involuntary muscle") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "blood vessel non-striated muscle") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "blood vessel smooth muscle tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "involuntary muscle of blood vessel") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "non-striated muscle of blood vessel") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "smooth muscle of blood vessel") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "smooth muscle tissue of blood vessel") AnnotationAssertion(Annotation( "ZFA:0005321") "vascular smooth muscle") AnnotationAssertion( "vascular smooth muscle tissue") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004237") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "blood vessel smooth muscle") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (spleen smooth muscle) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A portion of smooth muscle tissue that is part of a spleen [Automatically generated definition].") AnnotationAssertion( "EMAPA:35807") AnnotationAssertion( "MA:0000757") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "involuntary muscle of spleen") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "non-striated muscle of spleen") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "smooth muscle of spleen") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "smooth muscle tissue of spleen") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "spleen involuntary muscle") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "spleen non-striated muscle") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "spleen smooth muscle tissue") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004238") AnnotationAssertion(rdfs:label "spleen smooth muscle") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (small intestine smooth muscle) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A portion of smooth muscle tissue that is part of a small intestine [Automatically generated definition].") AnnotationAssertion(Annotation( "MA"^^xsd:string) "MA class may specifically mean muscle layer, but we treat as the sum of smooth muscle in both muscle layer and muscularis mucosa") AnnotationAssertion( "EMAPA:35783") AnnotationAssertion( "MA:0001559") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "involuntary muscle of small bowel") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "involuntary muscle of small intestine") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "non-striated muscle of small bowel") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "non-striated muscle of small intestine") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "small bowel involuntary muscle") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "small bowel non-striated muscle") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "small bowel smooth muscle") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "small bowel smooth muscle tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "small intestine involuntary muscle") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "small intestine non-striated muscle") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "small intestine smooth muscle tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "smooth muscle of small bowel") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "smooth muscle of small intestine") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "smooth muscle tissue of small bowel") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "smooth muscle tissue of small intestine") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004239") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "small intestine smooth muscle") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "consider merging") ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) # Class: (gall bladder smooth muscle) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A portion of smooth muscle tissue that is part of a gallbladder [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:35373") AnnotationAssertion( "MA:0001635") AnnotationAssertion( "NCIT:C49483") AnnotationAssertion(Annotation( "ncithesaurus:Gallbladder_Smooth_Muscle_Tissue") "UMLS:C1708179") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "gall bladder involuntary muscle") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "gall bladder non-striated muscle") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "gall bladder smooth muscle tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "gallbladder involuntary muscle") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "gallbladder non-striated muscle") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "gallbladder smooth muscle") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "gallbladder smooth muscle tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "involuntary muscle of gall bladder") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "involuntary muscle of gallbladder") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "non-striated muscle of gall bladder") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "non-striated muscle of gallbladder") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "smooth muscle of gall bladder") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "smooth muscle of gallbladder") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "smooth muscle tissue of gall bladder") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "smooth muscle tissue of gallbladder") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "MA:0001635") "biliary smooth muscle") AnnotationAssertion( "UBERON:0004240") AnnotationAssertion(rdfs:label "gall bladder smooth muscle") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (main bronchus smooth muscle) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A portion of smooth muscle tissue that is part of a main bronchus [Automatically generated definition].") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37551") AnnotationAssertion( "MA:0001848") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bronchus principalis involuntary muscle") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bronchus principalis non-striated muscle") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bronchus principalis smooth muscle") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bronchus principalis smooth muscle tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "involuntary muscle of bronchus principalis") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "involuntary muscle of main bronchus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "involuntary muscle of primary bronchus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "involuntary muscle of principal bronchus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "main bronchus involuntary muscle") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "main bronchus non-striated muscle") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "main bronchus smooth muscle tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "non-striated muscle of bronchus principalis") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "non-striated muscle of main bronchus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "non-striated muscle of primary bronchus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "non-striated muscle of principal bronchus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "primary bronchus involuntary muscle") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "primary bronchus non-striated muscle") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "primary bronchus smooth muscle") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "primary bronchus smooth muscle tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "principal bronchus involuntary muscle") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "principal bronchus non-striated muscle") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "principal bronchus smooth muscle") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "principal bronchus smooth muscle tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "smooth muscle of bronchus principalis") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "smooth muscle of main bronchus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "smooth muscle of primary bronchus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "smooth muscle of principal bronchus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "smooth muscle tissue of bronchus principalis") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "smooth muscle tissue of main bronchus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "smooth muscle tissue of primary bronchus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "smooth muscle tissue of principal bronchus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004241") AnnotationAssertion(rdfs:label "main bronchus smooth muscle") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (bronchus smooth muscle) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A portion of smooth muscle tissue that is part of a bronchus [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( "BTO:0004401") AnnotationAssertion( "EMAPA:35195") AnnotationAssertion( "MA:0001840") AnnotationAssertion( "NCIT:C49213") AnnotationAssertion(Annotation( "ncithesaurus:Bronchus_Smooth_Muscle_Tissue") "UMLS:C1707055") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bronchi involuntary muscle") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bronchi non-striated muscle") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bronchi smooth muscle") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bronchi smooth muscle tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bronchial trunk involuntary muscle") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bronchial trunk non-striated muscle") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bronchial trunk smooth muscle") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bronchial trunk smooth muscle tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bronchus involuntary muscle") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bronchus non-striated muscle") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bronchus smooth muscle tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "involuntary muscle of bronchi") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "involuntary muscle of bronchial trunk") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "involuntary muscle of bronchus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "non-striated muscle of bronchi") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "non-striated muscle of bronchial trunk") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "non-striated muscle of bronchus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "smooth muscle of bronchi") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "smooth muscle of bronchial trunk") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "smooth muscle of bronchus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "smooth muscle tissue of bronchi") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "smooth muscle tissue of bronchial trunk") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "smooth muscle tissue of bronchus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "EMAPA:35195") "bronchial smooth muscle") AnnotationAssertion( "UBERON:0004242") AnnotationAssertion(rdfs:label "bronchus smooth muscle") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (prostate gland smooth muscle) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A portion of smooth muscle tissue that is part of a prostate gland [Automatically generated definition].") AnnotationAssertion( "BTO:0003159") AnnotationAssertion( "EMAPA:35713") AnnotationAssertion( "FMA:74245") AnnotationAssertion( "MA:0001741") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "involuntary muscle of prostate") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "involuntary muscle of prostate gland") AnnotationAssertion(Annotation( "FMA:74245") "muscular tissue of prostate") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "non-striated muscle of prostate") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "non-striated muscle of prostate gland") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "prostate gland involuntary muscle") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "prostate gland non-striated muscle") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "prostate gland smooth muscle tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "prostate involuntary muscle") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "prostate non-striated muscle") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "prostate smooth muscle") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "prostate smooth muscle tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "smooth muscle of prostate") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "smooth muscle of prostate gland") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "smooth muscle tissue of prostate") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "smooth muscle tissue of prostate gland") AnnotationAssertion(Annotation( "FMA:74245") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "substantia muscularis prostatae") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004243") AnnotationAssertion(rdfs:label "prostate gland smooth muscle") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (oviduct smooth muscle) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A portion of smooth muscle tissue that is part of a fallopian tube [Automatically generated definition].") AnnotationAssertion( "EMAPA:29046") AnnotationAssertion( "MA:0001721") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "fallopian tube involuntary muscle") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "fallopian tube non-striated muscle") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "fallopian tube smooth muscle") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "fallopian tube smooth muscle tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "involuntary muscle of fallopian tube") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "non-striated muscle of fallopian tube") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "smooth muscle of fallopian tube") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "smooth muscle tissue of fallopian tube") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004245") AnnotationAssertion(rdfs:label "oviduct smooth muscle") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (outflow tract smooth muscle) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A portion of smooth muscle tissue that is part of a outflow tract [Automatically generated definition].") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37708") AnnotationAssertion( "MA:0000492") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "involuntary muscle of outflow tract") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "non-striated muscle of outflow tract") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "outflow tract involuntary muscle") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "outflow tract non-striated muscle") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "outflow tract smooth muscle tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "smooth muscle of outflow tract") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "smooth muscle tissue of outflow tract") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004246") AnnotationAssertion(rdfs:label "outflow tract smooth muscle") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (bone of dorsum) AnnotationAssertion(Annotation( ) "A bone that is part of the dorsal region of an animal.") AnnotationAssertion( "this class may be obsoleted. See: https://github.com/obophenotype/mouse-anatomy-ontology/issues/93") AnnotationAssertion( "https://github.com/obophenotype/uberon/wiki/Skeleton-partonomy-Design-Pattern"^^xsd:anyURI) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37248") AnnotationAssertion( "MA:0000494") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "MA:0000494") "back bone") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bone of back") AnnotationAssertion(Annotation( ) "dorsal region bone") AnnotationAssertion( "UBERON:0004247") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "bone of dorsum") SubClassOf( ) SubClassOf( ) # Class: (pedal digit bone) AnnotationAssertion(Annotation( ) "A bone that is part of a hindlimb digit. Typically phalanges but may include sesamoids.") AnnotationAssertion( "https://github.com/obophenotype/uberon/wiki/Skeleton-partonomy-Design-Pattern"^^xsd:anyURI) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37309") AnnotationAssertion( "MA:0000646") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bone of digit of foot") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "digit of foot bone") AnnotationAssertion( "digital bone of foot") AnnotationAssertion( "digital bone of pes") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "digitus pedis bone") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "digitus pedis bone organ") AnnotationAssertion(Annotation( "MA:0000646") "foot digit bone") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "foot digit bone organ") AnnotationAssertion(Annotation( "OBOL:accepted"^^xsd:string) "hind limb digit bone") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "toe bone") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "toe bone organ") AnnotationAssertion(Annotation( "NCBITaxon:9606"^^xsd:string) Annotation( "OBOL:accepted"^^xsd:string) Annotation( ) "foot digit bone") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004248") AnnotationAssertion(rdfs:label "pedal digit bone") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (manual digit bone) AnnotationAssertion(Annotation( ) "A bone that is part of a forelimb digit. Typically phalanges but may include sesamoids.") AnnotationAssertion( "https://github.com/obophenotype/uberon/wiki/Skeleton-partonomy-Design-Pattern"^^xsd:anyURI) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37305") AnnotationAssertion( "MA:0000622") AnnotationAssertion( "digital bone of hand") AnnotationAssertion( "digital bone of manus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "finger bone") AnnotationAssertion(Annotation( "OBOL:accepted"^^xsd:string) "fore limb digit bone") AnnotationAssertion(Annotation( "MA:0000622") "hand digit bone") AnnotationAssertion(Annotation( "NCBITaxon:9606"^^xsd:string) Annotation( "OBOL:accepted"^^xsd:string) Annotation( ) "hand digit bone") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004249") AnnotationAssertion(rdfs:label "manual digit bone") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (upper arm bone) AnnotationAssertion(Annotation( ) Annotation( "OBOL:automatic"^^xsd:string) "A bone that is part of a forelimb stylopod [Automatically generated definition].") AnnotationAssertion( "https://github.com/obophenotype/uberon/wiki/Skeleton-partonomy-Design-Pattern"^^xsd:anyURI) AnnotationAssertion( "EMAPA:35892") AnnotationAssertion( "MA:0000604") AnnotationAssertion(Annotation( ) "humerus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004250") AnnotationAssertion(rdfs:comment "May be merged into humerus. See: https://sourceforge.net/tracker/index.php?func=detail&aid=3586533&group_id=76834&atid=1205376") AnnotationAssertion(rdfs:label "upper arm bone") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (hindlimb zeugopod bone) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A bone that is part of a lower leg [Automatically generated definition].") AnnotationAssertion( "https://github.com/obophenotype/uberon/wiki/Skeleton-partonomy-Design-Pattern"^^xsd:anyURI) AnnotationAssertion( "EMAPA:35519") AnnotationAssertion( "MA:0000676") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bone of hind limb middle limb segment") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bone of hind limb zeugopod") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bone of hindlimb middle limb segment") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bone of hindlimb zeugopod") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bone of inferior member middle limb segment") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bone of inferior member zeugopod") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bone of intermediate segment of free lower limb") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bone of lower extremity middle limb segment") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bone of lower extremity zeugopod") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bone of lower leg") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bone of middle limb segment of hind limb") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bone of middle limb segment of hindlimb") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bone of middle limb segment of inferior member") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bone of middle limb segment of lower extremity") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bone of zeugopod of hind limb") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bone of zeugopod of hindlimb") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bone of zeugopod of inferior member") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bone of zeugopod of leg") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bone of zeugopod of lower extremity") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bone organ of hind limb middle limb segment") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bone organ of hind limb zeugopod") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bone organ of hindlimb middle limb segment") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bone organ of hindlimb zeugopod") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bone organ of inferior member middle limb segment") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bone organ of inferior member zeugopod") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bone organ of intermediate segment of free lower limb") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bone organ of lower extremity middle limb segment") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bone organ of lower extremity zeugopod") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bone organ of lower leg") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bone organ of middle limb segment of hind limb") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bone organ of middle limb segment of hindlimb") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bone organ of middle limb segment of inferior member") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bone organ of middle limb segment of lower extremity") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bone organ of zeugopod of hind limb") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bone organ of zeugopod of hindlimb") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bone organ of zeugopod of inferior member") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bone organ of zeugopod of leg") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bone organ of zeugopod of lower extremity") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "hind limb middle limb segment bone") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "hind limb middle limb segment bone organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "hind limb zeugopod bone") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "hind limb zeugopod bone organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "hindlimb middle limb segment bone") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "hindlimb middle limb segment bone organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "hindlimb zeugopod bone") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "hindlimb zeugopod bone organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "inferior member middle limb segment bone") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "inferior member middle limb segment bone organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "inferior member zeugopod bone") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "inferior member zeugopod bone organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "intermediate segment of free lower limb bone") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "intermediate segment of free lower limb bone organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "lower extremity middle limb segment bone") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "lower extremity middle limb segment bone organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "lower extremity zeugopod bone") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "lower extremity zeugopod bone organ") AnnotationAssertion(Annotation( "MA:0000676") "lower leg bone") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "middle limb segment of hind limb bone") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "middle limb segment of hind limb bone organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "middle limb segment of hindlimb bone") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "middle limb segment of hindlimb bone organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "middle limb segment of inferior member bone") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "middle limb segment of inferior member bone organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "middle limb segment of lower extremity bone") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "middle limb segment of lower extremity bone organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "zeugopod of hind limb bone") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "zeugopod of hind limb bone organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "zeugopod of hindlimb bone") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "zeugopod of hindlimb bone organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "zeugopod of inferior member bone") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "zeugopod of inferior member bone organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "zeugopod of leg bone") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "zeugopod of leg bone organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "zeugopod of lower extremity bone") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "zeugopod of lower extremity bone organ") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004251") AnnotationAssertion(rdfs:label "hindlimb zeugopod bone") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (hindlimb stylopod muscle) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "Any muscle organ that is part of a hindlimb stylopod (upper leg)[Automatically generated definition].") AnnotationAssertion( "UBERON:0000374") AnnotationAssertion( ) AnnotationAssertion( "BTO:0001367") AnnotationAssertion( "EMAPA:19144") AnnotationAssertion( "FMA:22470") AnnotationAssertion( "MA:0000684") AnnotationAssertion(Annotation( "FMA:22470") "muscle of thigh") AnnotationAssertion(Annotation( "FMA:22470") "thigh muscle") AnnotationAssertion(Annotation( "MA:0000684") "upper leg muscle") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004252") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "hindlimb stylopod muscle") SubClassOf( ) SubClassOf(Annotation( "prolog"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (skin muscle) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "Any muscle organ that is part of a skin of body [Automatically generated definition].") AnnotationAssertion( "review as part of general integumentary system review - part of skin, or more generally, integumental system") AnnotationAssertion(Annotation( "MA"^^xsd:string) "in MA, the only skin muscle is arrector pili. The only integumental muscle is panniculus carnosus. In EMAPA, the arrector pili only") AnnotationAssertion( "UBERON:0015797") AnnotationAssertion( "EMAPA:18187") AnnotationAssertion( "EMAPA:35776") AnnotationAssertion( "MA:0002710") AnnotationAssertion( "MA:0003139") AnnotationAssertion(Annotation( "MA:0003139") "integumental system muscle") AnnotationAssertion(Annotation( "EMAPA:18187") "muscle of integumental system") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "muscle organ of skin") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "skin muscle organ") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004253") AnnotationAssertion(rdfs:label "skin muscle") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (forelimb zeugopod muscle) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "Any muscle organ that is part of a forelimb zeugopod (lower arm)[Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:32622") AnnotationAssertion( "FMA:37371") AnnotationAssertion( "MA:0000600") AnnotationAssertion(Annotation( "FMA:37371") "forearm muscle") AnnotationAssertion(Annotation( "MA:0000600") "lower arm muscle") AnnotationAssertion(Annotation( "FMA:37371") "muscle of forearm") AnnotationAssertion(Annotation( "NCBITaxon:8782"^^xsd:string) Annotation( "OBOL:automatic"^^xsd:string) Annotation( ) "wing zeugopod muscle") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004254") AnnotationAssertion(rdfs:label "forelimb zeugopod muscle") SubClassOf( ) SubClassOf(Annotation( "prolog"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (forelimb stylopod muscle) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "Any muscle organ that is part of a forelimb stylopod (upper arm)[Automatically generated definition].") AnnotationAssertion( "the FMA class 'muscle of arm' belongs here, do not move") AnnotationAssertion( "See notes on UBERON:0001460 for possible terminological confusion over term 'arm'") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:19107") AnnotationAssertion( "FMA:37370") AnnotationAssertion( "MA:0000606") AnnotationAssertion(Annotation( "MA:0000606") "muscle of upper arm") AnnotationAssertion(Annotation( "MA:0000606") "upper arm muscle") AnnotationAssertion(Annotation( "NCBITaxon:8782"^^xsd:string) Annotation( "OBOL:automatic"^^xsd:string) Annotation( ) "wing stylopod muscle") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:37370") Annotation( ) "muscle of arm") AnnotationAssertion(Annotation( "EMAPA:19107") "skeletal muscle of upper arm") AnnotationAssertion( "UBERON:0004255") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "forelimb stylopod muscle") SubClassOf( ) SubClassOf(Annotation( "prolog"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (hindlimb zeugopod muscle) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "Any muscle organ that is part of a hindlimb zeugopod (lower leg) [Automatically generated definition].") AnnotationAssertion( "the FMA class 'muscle of leg' belongs here, do not move[cjm]") AnnotationAssertion( "See notes on UBERON:0000978 for possible terminological confusion over term 'leg'") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:19318") AnnotationAssertion( "FMA:22471") AnnotationAssertion( "MA:0000678") AnnotationAssertion(Annotation( "MA:0000678") "lower leg muscle") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "calf muscle") AnnotationAssertion(Annotation( "FMA:22471") Annotation( ) "muscle of leg") AnnotationAssertion( "UBERON:0004256") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "hindlimb zeugopod muscle") SubClassOf( ) SubClassOf(Annotation( "prolog"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (upper leg blood vessel) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A blood vessel that is part of a hindlimb stylopod [Automatically generated definition].") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37299") AnnotationAssertion( "MA:0000681") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "blood vessel of stylopod of hind limb") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "blood vessel of stylopod of hindlimb") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "blood vessel of thigh") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "blood vessel of upper leg") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "hind limb stylopod blood vessel") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "hindlimb stylopod blood vessel") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "thigh blood vessel") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004257") AnnotationAssertion(rdfs:label "upper leg blood vessel") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (back blood vessel) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A blood vessel that is part of a back [Automatically generated definition].") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37243") AnnotationAssertion( "MA:0000493") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "blood vessel of back") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004258") AnnotationAssertion(rdfs:label "back blood vessel") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lower arm blood vessel) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A blood vessel that is part of a lower arm [Automatically generated definition].") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37295") AnnotationAssertion( "MA:0000597") AnnotationAssertion(Annotation( ) "forelimb zeugopod blood vessel") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004259") AnnotationAssertion(rdfs:label "lower arm blood vessel") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (upper arm blood vessel) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A blood vessel that is part of a forelimb stylopod [Automatically generated definition].") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37294") AnnotationAssertion( "MA:0000603") AnnotationAssertion(Annotation( ) "forelimb stylopod blood vessel") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004260") AnnotationAssertion(rdfs:label "upper arm blood vessel") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lower leg blood vessel) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A blood vessel that is part of a lower leg [Automatically generated definition].") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37300") AnnotationAssertion( "MA:0000675") AnnotationAssertion(Annotation( ) "hindlimb zeugopod blood vessel") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004261") AnnotationAssertion(rdfs:label "lower leg blood vessel") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (upper leg skin) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A zone of skin that is part of a hindlimb stylopod [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:18159") AnnotationAssertion( "FMA:37790") AnnotationAssertion( "MA:0000686") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "hind limb stylopod skin") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "hindlimb stylopod skin") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "skin of upper leg") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "skin of thigh") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "thigh skin") AnnotationAssertion( "UBERON:0004262") AnnotationAssertion(rdfs:label "upper leg skin") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (upper arm skin) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A zone of skin that is part of a forelimb stylopod [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:18062") AnnotationAssertion( "FMA:37721") AnnotationAssertion( "MA:0000608") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "arm stylopod skin") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "skin of arm stylopod") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "skin of upper arm") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004263") AnnotationAssertion(rdfs:label "upper arm skin") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lower leg skin) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A zone of skin that is part of a lower leg [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:18156") AnnotationAssertion( "MA:0000680") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "hind limb middle limb segment skin") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "hind limb zeugopod skin") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004264") AnnotationAssertion(rdfs:label "lower leg skin") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (outflow tract myocardium) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A myocardium that is part of a outflow tract [Automatically generated definition].") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000603") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "PMID:9187138 Fishman MC, Chien KR, Fashioning the vertebrate heart: earliest embryonic decisions. Development (1997)") "(...) (theme) is how the vertebrate cardiovascular system differs from that of the presumptive evolutionary chordate ancestor. (...) At best we can tell there are two essential new ingredients: (1) vertebrates all have a continuous endothelial lining to the heart and vessels and (2) vertebrates have developed a second chamber in the heart, one designed for generating high systemic blood pressure.[uncertain][VHOG]") AnnotationAssertion( "EHDAA2:0001358") AnnotationAssertion( "EMAPA:35623") AnnotationAssertion( "MA:0000489") AnnotationAssertion( "VHOG:0000603") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "cardiac muscle of outflow tract") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "heart muscle of outflow tract") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "heart myocardium of outflow tract") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "muscle of heart of outflow tract") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "myocardium of outflow tract") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "outflow tract cardiac muscle") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "outflow tract heart muscle") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "outflow tract heart myocardium") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "outflow tract muscle of heart") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004265") AnnotationAssertion(rdfs:label "outflow tract myocardium") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (upper leg connective tissue) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A portion of connective tissue that is part of a hindlimb stylopod [Automatically generated definition].") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37325") AnnotationAssertion( "MA:0000683") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004266") AnnotationAssertion(rdfs:label "upper leg connective tissue") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (back connective tissue) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A portion of connective tissue that is part of a back [Automatically generated definition].") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37256") AnnotationAssertion( "MA:0000495") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mesenchyne of back") AnnotationAssertion( "UBERON:0004267") AnnotationAssertion(rdfs:label "back connective tissue") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lower arm connective tissue) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A portion of connective tissue that is part of a lower arm [Automatically generated definition].") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37319") AnnotationAssertion( "MA:0000599") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004268") AnnotationAssertion(rdfs:label "lower arm connective tissue") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (upper arm connective tissue) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A portion of connective tissue that is part of a forelimb stylopod [Automatically generated definition].") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37317") AnnotationAssertion( "MA:0000605") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004269") AnnotationAssertion(rdfs:label "upper arm connective tissue") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lower leg connective tissue) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A portion of connective tissue that is part of a lower leg [Automatically generated definition].") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37327") AnnotationAssertion( "MA:0000677") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004270") AnnotationAssertion(rdfs:label "lower leg connective tissue") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (outflow tract pericardium) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A pericardium that is part of a outflow tract [Automatically generated definition].") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37707") AnnotationAssertion( "MA:0000491") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "pericardium of outflow tract") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004271") AnnotationAssertion(rdfs:label "outflow tract pericardium") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (cartilaginous joint suture) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A cranial suture that is part of a cartilaginous joint [Automatically generated definition].") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37463") AnnotationAssertion( "MA:0001498") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "articulatio cartilaginea cranial suture") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "articulatio cartilaginea cranial sutures") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "articulatio cartilaginea cranial sutures set") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "articulatio cartilaginea cranium suture") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "articulatio cartilaginea suture of cranium") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "cartilaginous joint cranial suture") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "cartilaginous joint cranial sutures") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "cartilaginous joint cranial sutures set") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "cartilaginous joint cranium suture") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "cartilaginous joint suture of cranium") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "cranial suture of articulatio cartilaginea") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "cranial suture of cartilaginous joint") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "cranial sutures of articulatio cartilaginea") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "cranial sutures of cartilaginous joint") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "cranial sutures set of articulatio cartilaginea") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "cranial sutures set of cartilaginous joint") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "cranium suture of articulatio cartilaginea") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "cranium suture of cartilaginous joint") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "suture of cranium of articulatio cartilaginea") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "suture of cranium of cartilaginous joint") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004273") AnnotationAssertion(rdfs:label "cartilaginous joint suture") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lateral ventricle choroid plexus epithelium) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A choroid plexus epithelium that is part of a lateral ventricle [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0004450") AnnotationAssertion( "FMA:242815") AnnotationAssertion( "MA:0000962") AnnotationAssertion( "NCIT:C49248") AnnotationAssertion(Annotation( "ncithesaurus:Choroid_Plexus_Epithelium_of_the_Lateral_Ventricle") "UMLS:C1711323") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "chorioid plexus of cerebral hemisphere epithelial tissue of lateral ventricle") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "chorioid plexus of cerebral hemisphere epithelium of lateral ventricle") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "choroid plexus epithelial tissue of lateral ventricle") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "choroid plexus epithelium of lateral ventricle") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelial tissue of chorioid plexus of cerebral hemisphere of lateral ventricle") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelial tissue of choroid plexus of lateral ventricle") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelium of chorioid plexus of cerebral hemisphere of lateral ventricle") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelium of choroid plexus of lateral ventricle") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "lateral ventricle chorioid plexus of cerebral hemisphere epithelial tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "lateral ventricle chorioid plexus of cerebral hemisphere epithelium") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "lateral ventricle choroid plexus epithelial tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "lateral ventricle epithelial tissue of chorioid plexus of cerebral hemisphere") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "lateral ventricle epithelial tissue of choroid plexus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "lateral ventricle epithelium of chorioid plexus of cerebral hemisphere") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "lateral ventricle epithelium of choroid plexus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004274") AnnotationAssertion(rdfs:label "lateral ventricle choroid plexus epithelium") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (third ventricle choroid plexus epithelium) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A choroid plexus epithelium that is part of a third ventricle [Automatically generated definition].") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37055") AnnotationAssertion( "FMA:242821") AnnotationAssertion( "MA:0000880") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "chorioid plexus of cerebral hemisphere epithelial tissue of third ventricle") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "chorioid plexus of cerebral hemisphere epithelium of third ventricle") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "choroid plexus epithelial tissue of third ventricle") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "choroid plexus epithelium of third ventricle") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelial tissue of chorioid plexus of cerebral hemisphere of third ventricle") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelial tissue of choroid plexus of third ventricle") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelium of chorioid plexus of cerebral hemisphere of third ventricle") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelium of choroid plexus of third ventricle") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "third ventricle chorioid plexus of cerebral hemisphere epithelial tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "third ventricle chorioid plexus of cerebral hemisphere epithelium") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "third ventricle choroid plexus epithelial tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "third ventricle epithelial tissue of chorioid plexus of cerebral hemisphere") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "third ventricle epithelial tissue of choroid plexus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "third ventricle epithelium of chorioid plexus of cerebral hemisphere") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "third ventricle epithelium of choroid plexus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004275") AnnotationAssertion(rdfs:label "third ventricle choroid plexus epithelium") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (fourth ventricle choroid plexus epithelium) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A choroid plexus epithelium that is part of a fourth ventricle [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( "FMA:242823") AnnotationAssertion( "MA:0000984") AnnotationAssertion( "NCIT:C49230") AnnotationAssertion(Annotation( "ncithesaurus:Choroid_Plexus_Epithelium_of_the_Fourth_Ventricle") "UMLS:C1707392") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "chorioid plexus of cerebral hemisphere epithelial tissue of fourth ventricle") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "chorioid plexus of cerebral hemisphere epithelium of fourth ventricle") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "choroid plexus epithelial tissue of fourth ventricle") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "choroid plexus epithelium of fourth ventricle") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelial tissue of chorioid plexus of cerebral hemisphere of fourth ventricle") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelial tissue of choroid plexus of fourth ventricle") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelium of chorioid plexus of cerebral hemisphere of fourth ventricle") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelium of choroid plexus of fourth ventricle") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "fourth ventricle chorioid plexus of cerebral hemisphere epithelial tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "fourth ventricle chorioid plexus of cerebral hemisphere epithelium") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "fourth ventricle choroid plexus epithelial tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "fourth ventricle epithelial tissue of chorioid plexus of cerebral hemisphere") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "fourth ventricle epithelial tissue of choroid plexus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "fourth ventricle epithelium of chorioid plexus of cerebral hemisphere") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "fourth ventricle epithelium of choroid plexus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004276") AnnotationAssertion(rdfs:label "fourth ventricle choroid plexus epithelium") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (eye muscle) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A muscle that is part of the eye region.") AnnotationAssertion( "AAO:0000156") AnnotationAssertion( "EMAPA:35335") AnnotationAssertion( "MA:0000271") AnnotationAssertion( "OpenCyc:Mx8Ngx4rwKSh9pwpEbGdrcN5Y29ycB4rvViTvpwpEbGdrcN5Y29ycB4rvYA8cJwpEbGdrcN5Y29ycA") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004277") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "eye muscle") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "MA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (skeleton) AnnotationAssertion(Annotation( "VSAO:0000026") "Anatomical cluster that consists of all the skeletal elements (eg., bone, cartilage, and teeth) of the body.") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "VSAO:0000026") Annotation( "VSAO"^^xsd:string) Annotation( "GO_REF:0000034, http://dx.plos.org/10.1371/journal.pone.0051070") "Anatomical cluster that consists of all the skeletal elements (eg., bone, cartilage, and teeth) of the body.[VSAO]") AnnotationAssertion( "skeletal") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AEO:0000168") AnnotationAssertion( "EHDAA2:0001843") AnnotationAssertion( "EHDAA:5047") AnnotationAssertion( "EMAPA:17213") AnnotationAssertion( "FMA:23875") AnnotationAssertion( "GAID:177") AnnotationAssertion( "MA:0003006") AnnotationAssertion( "MAT:0000032") AnnotationAssertion( "MESH:D012863") AnnotationAssertion( "MIAA:0000032") AnnotationAssertion( "OpenCyc:Mx4rvVi1rpwpEbGdrcN5Y29ycA") AnnotationAssertion( "VSAO:0000026") AnnotationAssertion( "XAO:0004053") AnnotationAssertion( "galen:Skeleton") AnnotationAssertion( "set of all bones") AnnotationAssertion( "set of bones of body") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004288") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "skeleton") AnnotationAssertion(rdfs:seeAlso "https://github.com/obophenotype/uberon/wiki/The-skeletal-system"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses( ) # Class: (dermomyotome) AnnotationAssertion(Annotation( "AEO:0000214") "The bilaminar epithelium formed from the myotome and dermatome.") AnnotationAssertion(Annotation( ) "Epithelial sheet on the external surface of the somite that gives rise to trunk, muscle and dermis. Within the dermomyotome there is also a medio-lateral difference. The central region makes dermis, the mesenchymal connective tissue of the back skin. The medial region (closest to neural tube) makes epaxial muscle, and the lateral region (furthest from neural tube) makes hypaxial muscle[http://www.ncbi.nlm.nih.gov/bookshelf/br.fcgi?book=eurekah&part=A66768].") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0001513") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "Epithelial sheet on the external surface of the somite that gives rise to trunk, muscle and dermis.[TAO]") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0010572") Annotation( "AAO"^^xsd:string) Annotation( "AAO:EJS"^^xsd:string) "Portion of somites that gives rise to dermis and muscles.[AAO]") AnnotationAssertion(Annotation( ) "all but the sclerotome of a mesodermal somite; the primordium of skeletal muscle and, perhaps, of the dermis.") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000676") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "DOI:10.1111/j.1525-142X.2006.05079.x Devoto SH, Stoiber W, Hammond CL, Steinbacher P, Haslett JR, Barresi MJF, Patterson SE, Adiarte EG and Hughes SM, Generality of vertebrate developmental patterns: evidence for a dermomyotome in fish. Evolution and Development (2006)") "Thus, representatives of the agnathan vertebrates, chondrichthyans, and sarcopterygians all have a layer of undifferentiated cells external to the embryonic myotome. In the amniotes, this external cell layer is the dermomyotome. The simplest interpretation of the similar position, morphology, and lack of myosin labeling is that a dermomyotome epithelium is a shared, ancestral vertebrate characteristic.[well established][VHOG]") AnnotationAssertion( ) AnnotationAssertion( "AAO:0010572") AnnotationAssertion( "AEO:0000214") AnnotationAssertion( "EHDAA2:0003259") AnnotationAssertion( "EMAPA:31109") AnnotationAssertion( "FMA:295654") AnnotationAssertion( "NCIT:C34140") AnnotationAssertion( "TAO:0001513") AnnotationAssertion(Annotation( "ncithesaurus:Dermomyotome") "UMLS:C1511786") AnnotationAssertion( "VHOG:0000676") AnnotationAssertion( "ZFA:0001513") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "VHOG:0000676") "dermamyotome") AnnotationAssertion(Annotation( "VHOG:0000676") Annotation( ) "dermomyotomes") AnnotationAssertion( "UBERON:0004290") AnnotationAssertion(rdfs:label "dermomyotome") SubClassOf(Annotation( "AEO"^^xsd:string) ) SubClassOf(Annotation( "AEO"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) Annotation( "ZFA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (heart rudiment) AnnotationAssertion(Annotation( "GO:0003313") "A cone-like structure that is formed when myocardial progenitor cells of the heart field fuse at the midline. The heart rudiment is the first structure of the heart tube.") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0000115") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "The migrating myocardial precursors of the heart rudiment form a cone like structure between 19.5hpf and 22hpf, and eventually telescope out into the primitive heart tube at 24hpf. Stainier 2001.[TAO]") AnnotationAssertion( "TAO:0000115") AnnotationAssertion( "ZFA:0000115") AnnotationAssertion(Annotation( "GO:0003313") "heart cone") AnnotationAssertion(Annotation( "ZFA:0000115") "rudimentary heart") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004291") AnnotationAssertion(rdfs:label "heart rudiment") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (cardiac skeleton) AnnotationAssertion(Annotation( ) Annotation( "GO:0003204") "Dense connective tissue that separates the atria from the ventricles and provides physical support for the heart.") AnnotationAssertion( "It is not a true skeleton, but it does provide structure and support for the heart, as well as isolating the atria from the ventricles. This allows the AV node and AV bundle to delay the wave of depolarisation such that the atria can contract and assist in ventricular filling before the ventricles themselves depolarise and contract (the AV bundle is the only part of the conduction system that passes from the atria to the ventricles in a normal heart). It also allows the valves (bicuspid, tricuspid, semilunar) to keep open by giving them structural support[WP]") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:36645") AnnotationAssertion( "FMA:9496") AnnotationAssertion(Annotation( "EMAPA:36645") "cardiac fibrous skeleton") AnnotationAssertion( "fibrous skeleton of heart") AnnotationAssertion(Annotation( "GO:0003204") "heart fibrous skeleton") AnnotationAssertion(Annotation( "FMA:9496") "skeleton of heart") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "anulus fibrosus dexter cordis") AnnotationAssertion(Annotation( ) Annotation( ) "anulus fibrosus sinister cordis") AnnotationAssertion(Annotation( ) Annotation( ) "trigona fibrosa") AnnotationAssertion(Annotation( ) Annotation( ) "trigonum fibrosum dextrum cordis") AnnotationAssertion(Annotation( ) Annotation( ) "trigonum fibrosum sinistrum cordis") AnnotationAssertion( "UBERON:0004292") AnnotationAssertion(rdfs:label "cardiac skeleton") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/5/50/Gray495.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (parasympathetic nerve) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A nerve that is part of a parasympathetic nervous system [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0001401") AnnotationAssertion( "EMAPA:17271") AnnotationAssertion( "MA:0000224") AnnotationAssertion( "VHOG:0000641") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "nerve of parasympathetic nervous system") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004293") AnnotationAssertion(rdfs:label "parasympathetic nerve") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "NCBIBook:NBK10065") ObjectSomeValuesFrom( )) SubClassOf(Annotation( "NCBIBook:NBK10065") ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (glomerular capillary endothelium) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An endothelium that is part of a glomerular capillary.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "MA:0001658") AnnotationAssertion( "NCIT:C32522") AnnotationAssertion(Annotation( "ncithesaurus:Endothelium_of_the_Glomerular_Capillary") "UMLS:C0227647") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "renal glomerulus capillary endothelium") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004294") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "glomerular capillary endothelium") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (sympathetic nerve trunk) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A nerve trunk that is part of a sympathetic nervous system [Automatically generated definition].") AnnotationAssertion( "EHDAA2:0001970") AnnotationAssertion( "EMAPA:35845") AnnotationAssertion( "MA:0000227") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "nerve trunk of sympathetic nervous system") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "nerve trunk of sympathetic part of autonomic division of nervous system") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "sympathetic nervous system nerve trunk") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004295") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "sympathetic nerve trunk") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (respiratory system lymphatic vessel smooth muscle) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A lymphatic vessel smooth muscle that is part of a respiratory system [Automatically generated definition].") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37582") AnnotationAssertion( "MA:0001826") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "smooth muscle of lymph vessel of respiratory system") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004296") AnnotationAssertion(rdfs:label "respiratory system lymphatic vessel smooth muscle") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (respiratory system blood vessel smooth muscle) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A blood vessel smooth muscle that is part of a respiratory system [Automatically generated definition].") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37573") AnnotationAssertion( "MA:0001806") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "smooth muscle tissue of blood vessel of respiratory system") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004297") AnnotationAssertion(rdfs:label "respiratory system blood vessel smooth muscle") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (distal phalanx) AnnotationAssertion(Annotation( ) Annotation( ) "Distal-most phalanx within a digit.") AnnotationAssertion( "In human anatomy, the distal phalanges of the four fingers and toes articulate proximally with the intermediate phalanges at the distal interphalangeal joints (DIP); in the thumb and big toe, with only two phalanges, the distal phalanges articulate proximally with the proximal phalanges. The distal phalanges carry and shape nails and claws and are therefore occasionally referred to as the ungual phalanges. The distal phalanges are cone-shaped in most mammals, including most primates, but relatively wide and flat in humans.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010676") AnnotationAssertion( "EMAPA:35287") AnnotationAssertion( "MA:0002914") AnnotationAssertion(Annotation( ) "phalanx distalis") AnnotationAssertion(Annotation( "AAO:0010676") "terminal phalanx") AnnotationAssertion(Annotation( ) "ungual phalanx") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "phalanx distalis") AnnotationAssertion( "UBERON:0004300") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "distal phalanx") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/a/ab/Scheme_human_hand_bones-en.svg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (middle phalanx) AnnotationAssertion(Annotation( ) "A phalanx located between proximal and distal phalanges.") AnnotationAssertion( "consider using numbering system, and axioms to the effect that there is a single middle phalanx per finger in humans. This should perhaps be renamed 'intermediate phalanx', leaving the term middle phalanx open for the specific intermediate phalanx of a 3-phalanx digit") AnnotationAssertion(Annotation( "WP"^^xsd:string) "Intermediate phalanges are bones found in the limbs of most vertebrates. In humans, they are the bones of the finger and toe which lie in the middle, between the two wrinkly joints. The thumb and big toe do not have intermediate phalanges. In most other vertebrates, they have a corresponding place in their limbs, whether they be paw, wing, hoof or fin") AnnotationAssertion( "in some groups such as whales, there are multiple intermediate phalanges") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010677") AnnotationAssertion( "EMAPA:35572") AnnotationAssertion( "MA:0002915") AnnotationAssertion( "intermediate phalanx") AnnotationAssertion( "uberon") AnnotationAssertion( "medial phalanx") AnnotationAssertion(Annotation( "AAO:0010677") "penultimate phalanx") AnnotationAssertion( "phalanx 2") AnnotationAssertion( "phalanx II") AnnotationAssertion( "UBERON:0004301") AnnotationAssertion(rdfs:label "middle phalanx") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (proximal phalanx) AnnotationAssertion(Annotation( ) "Proximal-most phalanx within a digit.") AnnotationAssertion(Annotation( "WP"^^xsd:string) "Proximal phalanges are bones found in the limbs of most vertebrates. In humans, they are the bones at the base of a toe or finger, the prominent, knobby ends of which are often called the knuckles. In other vertebrates, proximal phalanges have a similar placement in the corresponding limbs, be they paw, wing or fin. In many species, they are the longest and thickest phalanx ('finger' bone)") AnnotationAssertion( "1"^^xsd:nonNegativeInteger) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010680") AnnotationAssertion( "EMAPA:35716") AnnotationAssertion( "MA:0002916") AnnotationAssertion( "phalanx 1") AnnotationAssertion( "phalanx I") AnnotationAssertion(Annotation( "AAO:0010680") "proximal-most phalanx") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004302") AnnotationAssertion(rdfs:label "proximal phalanx") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (distal phalanx of manual digit 2) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A distal phalanx that is part of a hand digit 2 [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( "FMA:23946") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "2nd digit of hand distal phalanx") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "2nd finger distal phalanx") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "distal phalanx of 2nd digit of hand") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "distal phalanx of 2nd finger") AnnotationAssertion(Annotation( "FMA:23946") "distal phalanx of index finger") AnnotationAssertion(Annotation( ) Annotation( ) "distal phalanx of manual digit II") AnnotationAssertion(Annotation( "FMA:23946") "distal phalanx of second digit of hand") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "distal phalanx of second finger") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "hand digit 2 distal phalanx") AnnotationAssertion(Annotation( "FMA:23946") "second distal phalanx of hand") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "second finger distal phalanx") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004311") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "distal phalanx of manual digit 2") SubClassOf( ) SubClassOf( ) SubClassOf( ) # Class: (distal phalanx of manual digit 3) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A distal phalanx that is part of a hand digit 3 [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:23947") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "3rd digit of hand distal phalanx") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "3rd finger distal phalanx") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "distal phalanx of 3rd digit of hand") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "distal phalanx of 3rd finger") AnnotationAssertion(Annotation( ) Annotation( ) "distal phalanx of manual digit III") AnnotationAssertion(Annotation( "FMA:23947") "distal phalanx of middle finger") AnnotationAssertion(Annotation( "FMA:23947") "distal phalanx of third digit of hand") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "distal phalanx of third finger") AnnotationAssertion(Annotation( ) Annotation( "NCBITaxon:9788"^^xsd:string) "equine 3rd phalanx of forelimb digit 3") AnnotationAssertion(Annotation( ) Annotation( "NCBITaxon:9788"^^xsd:string) "equine forelimb distal phalanx") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "hand digit 3 distal phalanx") AnnotationAssertion(Annotation( "FMA:23947") "third distal phalanx of hand") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "third finger distal phalanx") AnnotationAssertion(Annotation( "NCBITaxon:9787") "forelimb coffin bone") AnnotationAssertion(Annotation( "NCBITaxon:91561"^^xsd:string) "forelimb medial claw of artiodactyl") AnnotationAssertion(Annotation( "NCBITaxon:91561"^^xsd:string) "forelimb medial claw of ruminant hoof") AnnotationAssertion(Annotation( "NCBITaxon:91561"^^xsd:string) "forelimb medial ungual phalanx of artiodactyl") AnnotationAssertion(Annotation( "NCBITaxon:9787") "forelimb pedal bone") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004312") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "distal phalanx of manual digit 3") SubClassOf( ) SubClassOf( ) SubClassOf( ) # Class: (distal phalanx of manual digit 4) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A distal phalanx that is part of a hand digit 4 [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( "FMA:23948") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "4th digit of hand distal phalanx") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "4th finger distal phalanx") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "distal phalanx of 4th digit of hand") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "distal phalanx of 4th finger") AnnotationAssertion(Annotation( "FMA:23948") "distal phalanx of fourth digit of hand") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "distal phalanx of fourth finger") AnnotationAssertion(Annotation( ) Annotation( ) "distal phalanx of manual digit IV") AnnotationAssertion(Annotation( "FMA:23948") "distal phalanx of ring finger") AnnotationAssertion(Annotation( "FMA:23948") "fourth distal phalanx of hand") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "fourth finger distal phalanx") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "hand digit 4 distal phalanx") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004313") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "distal phalanx of manual digit 4") SubClassOf( ) SubClassOf( ) SubClassOf( ) # Class: (distal phalanx of manual digit 5) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A distal phalanx that is part of a hand digit 5 [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( "FMA:23949") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "5th digit of hand distal phalanx") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "5th finger distal phalanx") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "distal phalanx of 5th digit of hand") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "distal phalanx of 5th finger") AnnotationAssertion(Annotation( "FMA:23949") "distal phalanx of fifth digit of hand") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "distal phalanx of fifth finger") AnnotationAssertion(Annotation( "FMA:23949") "distal phalanx of little finger") AnnotationAssertion(Annotation( ) Annotation( ) "distal phalanx of manual digit V") AnnotationAssertion(Annotation( "FMA:23949") "fifth distal phalanx of hand") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "fifth finger distal phalanx") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "hand digit 5 distal phalanx") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004314") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "distal phalanx of manual digit 5") SubClassOf( ) SubClassOf( ) SubClassOf( ) # Class: (distal phalanx of pedal digit 1) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A distal phalanx that is part of a foot digit 1 [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( "FMA:32627") AnnotationAssertion(Annotation( "FMA:32627") "distal phalanx of big toe") AnnotationAssertion(Annotation( "FMA:32627") "distal phalanx of first digit of foot") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "distal phalanx of foot digit 1") AnnotationAssertion(Annotation( "FMA:32627") "distal phalanx of great toe") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "distal phalanx of hallux") AnnotationAssertion(Annotation( ) Annotation( ) "distal phalanx of pedal digit I") AnnotationAssertion(Annotation( "FMA:32627") "first distal phalanx of foot") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "foot digit 1 distal phalanx") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "hallux distal phalanx") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004315") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "distal phalanx of pedal digit 1") SubClassOf( ) SubClassOf( ) SubClassOf( ) # Class: (distal phalanx of pedal digit 2) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A distal phalanx that is part of a foot digit 2 [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( "FMA:32628") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "2nd toe distal phalanx") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "distal phalanx of 2nd toe") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "distal phalanx of foot digit 2") AnnotationAssertion(Annotation( ) Annotation( ) "distal phalanx of pedal digit II") AnnotationAssertion(Annotation( "FMA:32628") "distal phalanx of second digit of foot") AnnotationAssertion(Annotation( "FMA:32628") "distal phalanx of second toe") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "distal phalanx of the 2nd toe") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "foot digit 2 distal phalanx") AnnotationAssertion(Annotation( "FMA:32628") "second distal phalanx of foot") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004316") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "distal phalanx of pedal digit 2") SubClassOf( ) SubClassOf( ) SubClassOf( ) # Class: (distal phalanx of pedal digit 3) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A distal phalanx that is part of a foot digit 3 [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:32629") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "3rd toe distal phalanx") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "distal phalanx of 3rd toe") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "distal phalanx of foot digit 3") AnnotationAssertion(Annotation( ) Annotation( ) "distal phalanx of pedal digit III") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "distal phalanx of the 3rd toe") AnnotationAssertion(Annotation( "FMA:32629") "distal phalanx of third digit of foot") AnnotationAssertion(Annotation( "FMA:32629") "distal phalanx of third toe") AnnotationAssertion(Annotation( ) Annotation( "NCBITaxon:9788"^^xsd:string) "equine 3rd phalanx of hindlimb digit 3") AnnotationAssertion(Annotation( ) Annotation( "NCBITaxon:9788"^^xsd:string) "equine hindlimb distal phalanx") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "foot digit 3 distal phalanx") AnnotationAssertion(Annotation( "FMA:32629") "third distal phalanx of foot") AnnotationAssertion(Annotation( "NCBITaxon:9787") "hindlimb coffin bone") AnnotationAssertion(Annotation( "NCBITaxon:91561"^^xsd:string) "hindlimb medial claw of artiodactyl") AnnotationAssertion(Annotation( "NCBITaxon:91561"^^xsd:string) "hindlimb medial claw of ruminant hoof") AnnotationAssertion(Annotation( "NCBITaxon:91561"^^xsd:string) "hindlimb medial ungual phalanx of artiodactyl") AnnotationAssertion(Annotation( "NCBITaxon:9787") "hindlimb pedal bone") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004317") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "distal phalanx of pedal digit 3") SubClassOf( ) SubClassOf( ) SubClassOf( ) # Class: (distal phalanx of pedal digit 4) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A distal phalanx that is part of a foot digit 4 [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( "FMA:32630") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "4th toe distal phalanx") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "distal phalanx of 4th toe") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "distal phalanx of foot digit 4") AnnotationAssertion(Annotation( "FMA:32630") "distal phalanx of fourth digit of foot") AnnotationAssertion(Annotation( "FMA:32630") "distal phalanx of fourth toe") AnnotationAssertion(Annotation( ) Annotation( ) "distal phalanx of pedal digit IV") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "distal phalanx of the 4th toe") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "foot digit 4 distal phalanx") AnnotationAssertion(Annotation( "FMA:32630") "fourth distal phalanx of foot") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004318") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "distal phalanx of pedal digit 4") SubClassOf( ) SubClassOf( ) SubClassOf( ) # Class: (distal phalanx of pedal digit 5) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A distal phalanx that is part of a foot digit 5 [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:32631") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "5th toe distal phalanx") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "distal phalanx of 5th toe") AnnotationAssertion(Annotation( "FMA:32631") "distal phalanx of fifth digit of foot") AnnotationAssertion(Annotation( "FMA:32631") "distal phalanx of fifth toe") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "distal phalanx of foot digit 5") AnnotationAssertion(Annotation( "FMA:32631") "distal phalanx of little toe") AnnotationAssertion(Annotation( ) Annotation( ) "distal phalanx of pedal digit V") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "distal phalanx of the 5th toe") AnnotationAssertion(Annotation( "FMA:32631") "fifth distal phalanx of foot") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "foot digit 5 distal phalanx") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004319") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "distal phalanx of pedal digit 5") SubClassOf( ) SubClassOf( ) SubClassOf( ) # Class: (middle phalanx of manual digit 2) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A middle phalanx that is part of a hand digit 2 [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( "FMA:23933") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "2nd digit of hand intermediate phalanx") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "2nd digit of hand middle phalanx") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "2nd finger intermediate phalanx") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "2nd finger middle phalanx") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "hand digit 2 intermediate phalanx") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "hand digit 2 middle phalanx") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "intermediate phalanx of 2nd digit of hand") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "intermediate phalanx of 2nd finger") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "intermediate phalanx of hand digit 2") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "intermediate phalanx of second finger") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "middle phalanx of 2nd digit of hand") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "middle phalanx of 2nd finger") AnnotationAssertion(Annotation( "FMA:23933") "middle phalanx of index finger") AnnotationAssertion(Annotation( ) Annotation( ) "middle phalanx of manual digit II") AnnotationAssertion(Annotation( "FMA:23933") "middle phalanx of second digit of hand") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "middle phalanx of second finger") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "second finger intermediate phalanx") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "second finger middle phalanx") AnnotationAssertion(Annotation( "FMA:23933") "second middle phalanx of hand") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004320") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "middle phalanx of manual digit 2") SubClassOf( ) SubClassOf( ) SubClassOf( ) # Class: (middle phalanx of manual digit 3) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A middle phalanx that is part of a hand digit 3 [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:23934") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "3rd digit of hand intermediate phalanx") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "3rd digit of hand middle phalanx") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "3rd finger intermediate phalanx") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "3rd finger middle phalanx") AnnotationAssertion(Annotation( ) "forelimb digit III P2") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "hand digit 3 intermediate phalanx") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "hand digit 3 middle phalanx") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "intermediate phalanx of 3rd digit of hand") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "intermediate phalanx of 3rd finger") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "intermediate phalanx of hand digit 3") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "intermediate phalanx of third finger") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "middle phalanx of 3rd digit of hand") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "middle phalanx of 3rd finger") AnnotationAssertion(Annotation( ) Annotation( ) "middle phalanx of manual digit III") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "middle phalanx of middle finger") AnnotationAssertion(Annotation( "FMA:23934") "middle phalanx of third digit of hand") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "middle phalanx of third finger") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "third finger intermediate phalanx") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "third finger middle phalanx") AnnotationAssertion(Annotation( "FMA:23934") "third middle phalanx of hand") AnnotationAssertion(Annotation( ) Annotation( "NCBITaxon:9788"^^xsd:string) "forelimb short pastern bone") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004321") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "middle phalanx of manual digit 3") SubClassOf( ) SubClassOf( ) SubClassOf( ) # Class: (middle phalanx of manual digit 4) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A middle phalanx that is part of a hand digit 4 [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( "FMA:23935") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "4th digit of hand intermediate phalanx") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "4th digit of hand middle phalanx") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "4th finger intermediate phalanx") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "4th finger middle phalanx") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "fourth finger intermediate phalanx") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "fourth finger middle phalanx") AnnotationAssertion(Annotation( "FMA:23935") "fourth middle phalanx of hand") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "hand digit 4 intermediate phalanx") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "hand digit 4 middle phalanx") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "intermediate phalanx of 4th digit of hand") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "intermediate phalanx of 4th finger") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "intermediate phalanx of fourth finger") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "intermediate phalanx of hand digit 4") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "middle phalanx of 4th digit of hand") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "middle phalanx of 4th finger") AnnotationAssertion(Annotation( "FMA:23935") "middle phalanx of fourth digit of hand") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "middle phalanx of fourth finger") AnnotationAssertion(Annotation( ) Annotation( ) "middle phalanx of manual digit IV") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "middle phalanx of ring finger") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004322") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "middle phalanx of manual digit 4") SubClassOf( ) SubClassOf( ) SubClassOf( ) # Class: (middle phalanx of manual digit 5) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A middle phalanx that is part of a hand digit 5 [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( "FMA:23936") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "5th digit of hand intermediate phalanx") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "5th digit of hand middle phalanx") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "5th finger intermediate phalanx") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "5th finger middle phalanx") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "fifth finger intermediate phalanx") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "fifth finger middle phalanx") AnnotationAssertion(Annotation( "FMA:23936") "fifth middle phalanx of hand") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "hand digit 5 intermediate phalanx") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "hand digit 5 middle phalanx") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "intermediate phalanx of 5th digit of hand") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "intermediate phalanx of 5th finger") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "intermediate phalanx of fifth finger") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "intermediate phalanx of hand digit 5") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "middle phalanx of 5th digit of hand") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "middle phalanx of 5th finger") AnnotationAssertion(Annotation( "FMA:23936") "middle phalanx of fifth digit of hand") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "middle phalanx of fifth finger") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "middle phalanx of little finger") AnnotationAssertion(Annotation( ) Annotation( ) "middle phalanx of manual digit V") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004323") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "middle phalanx of manual digit 5") SubClassOf( ) SubClassOf( ) SubClassOf( ) # Class: (middle phalanx of pedal digit 2) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A middle phalanx that is part of a foot digit 2 [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( "FMA:32623") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "2nd toe intermediate phalanx") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "2nd toe middle phalanx") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "foot digit 2 intermediate phalanx") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "foot digit 2 middle phalanx") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "intermediate phalanx of 2nd toe") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "intermediate phalanx of foot digit 2") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "middle phalanx of 2nd toe") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "middle phalanx of foot digit 2") AnnotationAssertion(Annotation( ) Annotation( ) "middle phalanx of pedal digit II") AnnotationAssertion(Annotation( "FMA:32623") "middle phalanx of second digit of foot") AnnotationAssertion(Annotation( "FMA:32623") "middle phalanx of second toe") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "middle phalanx of the 2nd toe") AnnotationAssertion(Annotation( "FMA:32623") "second middle phalanx of foot") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004324") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "middle phalanx of pedal digit 2") SubClassOf( ) SubClassOf( ) SubClassOf( ) # Class: (middle phalanx of pedal digit 3) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A middle phalanx that is part of a foot digit 3 [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:32624") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "3rd toe intermediate phalanx") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "3rd toe middle phalanx") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "foot digit 3 intermediate phalanx") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "foot digit 3 middle phalanx") AnnotationAssertion(Annotation( ) "hindlimb digit III P2") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "intermediate phalanx of 3rd toe") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "intermediate phalanx of foot digit 3") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "middle phalanx of 3rd toe") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "middle phalanx of foot digit 3") AnnotationAssertion(Annotation( ) Annotation( ) "middle phalanx of pedal digit III") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "middle phalanx of the 3rd toe") AnnotationAssertion(Annotation( "FMA:32624") "middle phalanx of third digit of foot") AnnotationAssertion(Annotation( "FMA:32624") "middle phalanx of third toe") AnnotationAssertion(Annotation( "FMA:32624") "third middle phalanx of foot") AnnotationAssertion(Annotation( ) Annotation( "NCBITaxon:9788"^^xsd:string) "hindlimb short pastern bone") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004325") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "middle phalanx of pedal digit 3") SubClassOf( ) SubClassOf( ) SubClassOf( ) # Class: (middle phalanx of pedal digit 4) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A middle phalanx that is part of a pedal digit 4 [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( "FMA:32625") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "4th toe intermediate phalanx") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "4th toe middle phalanx") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "foot digit 4 intermediate phalanx") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "foot digit 4 middle phalanx") AnnotationAssertion(Annotation( "FMA:32625") "fourth middle phalanx of foot") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "intermediate phalanx of 4th toe") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "intermediate phalanx of foot digit 4") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "middle phalanx of 4th toe") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "middle phalanx of foot digit 4") AnnotationAssertion(Annotation( "FMA:32625") "middle phalanx of fourth digit of foot") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "middle phalanx of fourth toe") AnnotationAssertion(Annotation( ) Annotation( ) "middle phalanx of pedal digit IV") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "middle phalanx of the 4th toe") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004326") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "middle phalanx of pedal digit 4") SubClassOf( ) SubClassOf( ) SubClassOf( ) # Class: (middle phalanx of pedal digit 5) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A middle phalanx that is part of a pedal digit 5 [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:230984") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "5th toe intermediate phalanx") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "5th toe middle phalanx") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "foot digit 5 intermediate phalanx") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "foot digit 5 middle phalanx") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "intermediate phalanx of 5th toe") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "intermediate phalanx of foot digit 5") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "middle phalanx of 5th toe") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "middle phalanx of foot digit 5") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "middle phalanx of little toe") AnnotationAssertion(Annotation( ) Annotation( ) "middle phalanx of pedal digit V") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "middle phalanx of the 5th toe") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004327") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "middle phalanx of pedal digit 5") SubClassOf( ) SubClassOf( ) SubClassOf( ) # Class: (proximal phalanx of manual digit 2) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A proximal phalanx that is part of a hand digit 2 [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( "FMA:23919") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "2nd digit of hand proximal phalanx") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "2nd finger proximal phalanx") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "hand digit 2 proximal phalanx") AnnotationAssertion(Annotation( "PHENOSCAPE:wd") "manual digit 2 proximal phalanx") AnnotationAssertion(Annotation( "PHENOSCAPE:wd") "manual phalanx II-1") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "proximal phalanx of 2nd digit of hand") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "proximal phalanx of 2nd finger") AnnotationAssertion(Annotation( "FMA:23919") "proximal phalanx of index finger") AnnotationAssertion(Annotation( ) Annotation( ) "proximal phalanx of manual digit II") AnnotationAssertion(Annotation( "FMA:23919") "proximal phalanx of second digit of hand") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "proximal phalanx of second finger") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "second finger proximal phalanx") AnnotationAssertion(Annotation( "FMA:23919") "second proximal phalanx of hand") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004328") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "proximal phalanx of manual digit 2") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (proximal phalanx of manual digit 3) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A proximal phalanx that is part of a hand digit 3 [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:23920") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "3rd digit of hand proximal phalanx") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "3rd finger proximal phalanx") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "hand digit 3 proximal phalanx") AnnotationAssertion(Annotation( "PHENOSCAPE:wd") "manual digit 3 proximal phalanx") AnnotationAssertion(Annotation( "PHENOSCAPE:wd") "manual phalanx III-1") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "proximal phalanx of 3rd digit of hand") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "proximal phalanx of 3rd finger") AnnotationAssertion(Annotation( ) Annotation( ) "proximal phalanx of manual digit III") AnnotationAssertion(Annotation( "FMA:23920") "proximal phalanx of middle finger") AnnotationAssertion(Annotation( "FMA:23920") "proximal phalanx of third digit of hand") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "proximal phalanx of third finger") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "third finger proximal phalanx") AnnotationAssertion(Annotation( "FMA:23920") "third proximal phalanx of hand") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004329") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "proximal phalanx of manual digit 3") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (proximal phalanx of manual digit 4) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A proximal phalanx that is part of a hand digit 4 [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( "FMA:23921") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "4th digit of hand proximal phalanx") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "4th finger proximal phalanx") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "fourth finger proximal phalanx") AnnotationAssertion(Annotation( "FMA:23921") "fourth proximal phalanx of hand") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "hand digit 4 proximal phalanx") AnnotationAssertion(Annotation( "PHENOSCAPE:wd") "manual digit 4 proximal phalanx") AnnotationAssertion(Annotation( "PHENOSCAPE:wd") "manual phalanx IV-1") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "proximal phalanx of 4th digit of hand") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "proximal phalanx of 4th finger") AnnotationAssertion(Annotation( "FMA:23921") "proximal phalanx of fourth digit of hand") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "proximal phalanx of fourth finger") AnnotationAssertion(Annotation( ) Annotation( ) "proximal phalanx of manual digit IV") AnnotationAssertion(Annotation( "FMA:23921") "proximal phalanx of ring finger") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004330") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "proximal phalanx of manual digit 4") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (proximal phalanx of manual digit 5) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A proximal phalanx that is part of a hand digit 5 [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( "FMA:23922") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "5th digit of hand proximal phalanx") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "5th finger proximal phalanx") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "fifth finger proximal phalanx") AnnotationAssertion(Annotation( "FMA:23922") "fifth proximal phalanx of hand") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "hand digit 5 proximal phalanx") AnnotationAssertion(Annotation( "PHENOSCAPE:wd") "manual digit 5 proximal phalanx") AnnotationAssertion(Annotation( "PHENOSCAPE:wd") "manual phalanx V-1") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "proximal phalanx of 5th digit of hand") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "proximal phalanx of 5th finger") AnnotationAssertion(Annotation( "FMA:23922") "proximal phalanx of fifth digit of hand") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "proximal phalanx of fifth finger") AnnotationAssertion(Annotation( "FMA:23922") "proximal phalanx of little finger") AnnotationAssertion(Annotation( ) Annotation( ) "proximal phalanx of manual digit V") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004331") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "proximal phalanx of manual digit 5") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (proximal phalanx of pedal digit 1) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A proximal phalanx that is part of a pedal digit 1 [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( "FMA:43252") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "foot digit 1 proximal phalanx") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "hallux proximal phalanx") AnnotationAssertion(Annotation( "PHENOSCAPE:wd") "pedal phalanx I-1") AnnotationAssertion(Annotation( "PHENOSCAPE:wd") "predal digit 1 proximal phalanx") AnnotationAssertion(Annotation( "FMA:43252") "proximal phalanx of big toe") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "proximal phalanx of foot digit 1") AnnotationAssertion(Annotation( "FMA:43252") "proximal phalanx of great toe") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "proximal phalanx of hallux") AnnotationAssertion(Annotation( ) Annotation( ) "proximal phalanx of pedal digit I") AnnotationAssertion( "proximal phalanx of the 1st toe") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004332") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "proximal phalanx of pedal digit 1") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (proximal phalanx of pedal digit 2) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A proximal phalanx that is part of a pedal digit 2 [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( "FMA:32618") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "2nd toe proximal phalanx") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "foot digit 2 proximal phalanx") AnnotationAssertion(Annotation( "PHENOSCAPE:wd") "pedal phalanx II-1") AnnotationAssertion(Annotation( "PHENOSCAPE:wd") "predal digit 2 proximal phalanx") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "proximal phalanx of 2nd toe") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "proximal phalanx of foot digit 2") AnnotationAssertion(Annotation( ) Annotation( ) "proximal phalanx of pedal digit II") AnnotationAssertion(Annotation( "FMA:32618") "proximal phalanx of second digit of foot") AnnotationAssertion(Annotation( "FMA:32618") "proximal phalanx of second toe") AnnotationAssertion( "proximal phalanx of the 2nd toe") AnnotationAssertion(Annotation( "FMA:32618") "second proximal phalanx of foot") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004333") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "proximal phalanx of pedal digit 2") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (proximal phalanx of pedal digit 3) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A proximal phalanx that is part of a pedal digit 3 [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:32619") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "3rd toe proximal phalanx") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "foot digit 3 proximal phalanx") AnnotationAssertion(Annotation( "PHENOSCAPE:wd") "pedal phalanx III-1") AnnotationAssertion(Annotation( "PHENOSCAPE:wd") "predal digit 3 proximal phalanx") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "proximal phalanx of 3rd toe") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "proximal phalanx of foot digit 3") AnnotationAssertion(Annotation( ) Annotation( ) "proximal phalanx of pedal digit III") AnnotationAssertion( "proximal phalanx of the 3rd toe") AnnotationAssertion(Annotation( "FMA:32619") "proximal phalanx of third digit of foot") AnnotationAssertion(Annotation( "FMA:32619") "proximal phalanx of third toe") AnnotationAssertion(Annotation( "FMA:32619") "third proximal phalanx of foot") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004334") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "proximal phalanx of pedal digit 3") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (proximal phalanx of pedal digit 4) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A proximal phalanx that is part of a pedal digit 4 [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( "FMA:32620") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "4th toe proximal phalanx") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "foot digit 4 proximal phalanx") AnnotationAssertion(Annotation( "FMA:32620") "fourth proximal phalanx of foot") AnnotationAssertion(Annotation( "PHENOSCAPE:wd") "pedal phalanx IV-1") AnnotationAssertion(Annotation( "PHENOSCAPE:wd") "predal digit 4 proximal phalanx") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "proximal phalanx of 4th toe") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "proximal phalanx of foot digit 4") AnnotationAssertion(Annotation( "FMA:32620") "proximal phalanx of fourth digit of foot") AnnotationAssertion(Annotation( "FMA:32620") "proximal phalanx of fourth toe") AnnotationAssertion(Annotation( ) Annotation( ) "proximal phalanx of pedal digit IV") AnnotationAssertion( "proximal phalanx of the 4th toe") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004335") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "proximal phalanx of pedal digit 4") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (proximal phalanx of pedal digit 5) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A proximal phalanx that is part of a pedal digit 5 [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:32621") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "5th toe proximal phalanx") AnnotationAssertion(Annotation( "FMA:32621") "fifth proximal phalanx of foot") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "foot digit 5 proximal phalanx") AnnotationAssertion(Annotation( "PHENOSCAPE:wd") "pedal phalanx V-1") AnnotationAssertion(Annotation( "PHENOSCAPE:wd") "predal digit 5 proximal phalanx") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "proximal phalanx of 5th toe") AnnotationAssertion(Annotation( "FMA:32621") "proximal phalanx of fifth digit of foot") AnnotationAssertion(Annotation( "FMA:32621") "proximal phalanx of fifth toe") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "proximal phalanx of foot digit 5") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "proximal phalanx of little toe") AnnotationAssertion(Annotation( ) Annotation( ) "proximal phalanx of pedal digit V") AnnotationAssertion( "proximal phalanx of the 5th toe") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004336") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "proximal phalanx of pedal digit 5") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (distal phalanx of manual digit 1) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A distal phalanx that is part of a hand digit 1 [Automatically generated definition].") AnnotationAssertion(Annotation( "WP"^^xsd:string) "The human pollical distal phalanx (PDP) has a pronounced insertion for the flexor pollicis longus (asymmetric towards the radial side), an ungual fossa, and a pair of dissymmetric ungual spines (the ulnar being more prominent). This asymmetry is necessary to ensure that the thumb pulp is always facing the pulps of the other digits, an osteological configuration which provides the maximum contact surface with held objects.") AnnotationAssertion( ) AnnotationAssertion( "FMA:23945") AnnotationAssertion(Annotation( ) "PDP") AnnotationAssertion(Annotation( "FMA:23945") "distal phalanx of first digit of hand") AnnotationAssertion(Annotation( ) Annotation( ) "distal phalanx of manual digit I") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "distal phalanx of thumb") AnnotationAssertion(Annotation( "FMA:23945") "first distal phalanx of hand") AnnotationAssertion(Annotation( "PHENOSCAPE:wd") "manual digit 1 distal phalanx") AnnotationAssertion(Annotation( ) "pollical distal phalanx") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "thumb distal phalanx") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004337") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "distal phalanx of manual digit 1") SubClassOf( ) SubClassOf( ) SubClassOf( ) # Class: (proximal phalanx of manual digit 1) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A proximal phalanx that is part of a hand digit 1 [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( "FMA:23918") AnnotationAssertion(Annotation( "FMA:23918") "first proximal phalanx of hand") AnnotationAssertion(Annotation( "PHENOSCAPE:wd") "manual digit 1 proximal phalanx") AnnotationAssertion(Annotation( "PHENOSCAPE:wd") "manual phalanx I-1") AnnotationAssertion(Annotation( "FMA:23918") "proximal phalanx of first digit of hand") AnnotationAssertion(Annotation( ) Annotation( ) "proximal phalanx of manual digit I") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "proximal phalanx of thumb") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "thumb proximal") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004338") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "proximal phalanx of manual digit 1") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (vault of skull) AnnotationAssertion(Annotation( ) Annotation( ) Annotation( "MP:0000076") "Upper part of skull, consisting of parietals, frontals, post-parietals, and in some species the squamosal and a portion of the alisphenoid.") AnnotationAssertion( "We follow http://www.ncbi.nlm.nih.gov/pubmed/11523816 (Morriss-Kay) in definingenumerating the components of the skull vault. Note that there is a conflict with Kardong; e.g. in fig 7.10, Kardong places the squamosal in the temporal series. We cannot place the vault as entirely part of the dermatocranium as it has a small splanchnocranium contribution and a sclerotomal contribution") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000331") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0072528305 Kardong KV, Vertebrates: Comparative Anatomy, Function, Evolution (2006) p.256") "The earliest tetrapods arose from rhipidistian ancestors and retained many of their skull features, including most of the bones of the dermatocranium.[well established][VHOG]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0002167") AnnotationAssertion( "EHDAA:9538") AnnotationAssertion( "EMAPA:18016") AnnotationAssertion( "FMA:52800") AnnotationAssertion( "NCIT:C81188") AnnotationAssertion(Annotation( "ncithesaurus:Skullcap") "UMLS:C0205950") AnnotationAssertion( "VHOG:0000331") AnnotationAssertion( "ZFA:0005606") AnnotationAssertion(Annotation( "FMA:52800") "calva") AnnotationAssertion(Annotation( "ZFA:0005606") "cranial vault") AnnotationAssertion( "skull vault") AnnotationAssertion( "skull roof") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "ZFA:0005606") Annotation( ) "calvaria") AnnotationAssertion( "calvarium") AnnotationAssertion(Annotation( "ZFA:0005606") "skullcap") AnnotationAssertion( "UBERON:0004339") AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "Terminology notes. we include calvarium as a synonym, but Gray's Anatomy's list includes the Ethmoid and Sphenoid bone in the Calvaria. Some books (and HPO) state that calvaria consists of just the frontal bone, parietal bone, temporal bone, and occipital bone. Note vault may not be precisely equivalent to calvaria") AnnotationAssertion(rdfs:label "vault of skull") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "small pharyngeal arch and sclerotomal contribution") ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) SubClassOf( ObjectSomeValuesFrom( )) # Class: (allantois) AnnotationAssertion(Annotation( ) Annotation( "VHOG:0000738") "A membranous sac that develops from the posterior part of the alimentary canal in the embryos of mammals, birds, and reptiles, and it is important in the formation of the umbilical cord and placenta in mammals[VHOG].") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000738") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( ) "A membranous sac that develops from the posterior part of the alimentary canal in the embryos of mammals, birds, and reptiles, and it is important in the formation of the umbilical cord and placenta in mammals. [TFD][VHOG]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000738") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0072528305 Kardong KV, Vertebrates: Comparative Anatomy, Function, Evolution (2006) p.187") "Structures homologous to the four extraembryonic membranes of reptiles and birds appear in mammals: amnion, chorion, yolk sac, and allantois.[well established][VHOG]") AnnotationAssertion( "allantoic") AnnotationAssertion( "a diverticulum of the hindgut endoderm [ISBN:0073040584 (Vertebrates, Kardong)]") AnnotationAssertion(Annotation( "EHDAA2"^^xsd:string) "part_of embryo in EHDAA2 - note differences in humans") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0000474") AnnotationAssertion( "EHDAA2:0001504") AnnotationAssertion( "EMAPA:16107") AnnotationAssertion( "EMAPA_RETIRED:16084") AnnotationAssertion( "MESH:A16.254.403.147") AnnotationAssertion( "NCIT:C34101") AnnotationAssertion( "RETIRED_EHDAA2:0000114") AnnotationAssertion(Annotation( "ncithesaurus:Allantois") "UMLS:C0002084") AnnotationAssertion( "VHOG:0000738") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "EMAPA:16107") "allantoic bud") AnnotationAssertion( "UBERON:0004340") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "allantois") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/a/a5/Gray25.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "EHDAA2-modified") ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) SubClassOf(Annotation( "Hymans") ObjectSomeValuesFrom( )) SubClassOf(Annotation( "hindgut diverticulum endoderm") Annotation( "ISBN:0073040584"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "ISBN:0073040584"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (primitive streak) AnnotationAssertion(Annotation( ) Annotation( "MP:0002231") "The primitive streak is a structure that forms during the early stages of avian, reptilian and mammalian embryonic development[WP]. the midline ridge of the embryonic epiblast that later develops into mesoderm and endoderm[MP].") AnnotationAssertion( ) AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001202") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "PMID:9609826 Wu LH, Lengyel JA, Role of caudal in hindgut specification and gastrulation suggests homology between Drosophila amnioproctodeal invagination and vertebrate blastopore. Development (1998), ISBN:978-0030223693 Liem KF, Bemis WE, Walker WF, Grande L, Functional Anatomy of the Vertebrates: An Evolutionary Perspective (2001) p.139") "(...) the blastopore equivalent of chordates (germ ring in fish, marginal zone/blastopore lip in frog and node/primitive streak in chick and mouse) (...) (reference 1); Indeed, the primitive streak has been considered the homologue of the blastopore since the 1870s (reference 2).[well established][VHOG]") AnnotationAssertion(Annotation( "VHOG") "VHOG includes a very broad grouping here based on http://www.ncbi.nlm.nih.gov/pubmed/9609826") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0001525") AnnotationAssertion( "EHDAA:185") AnnotationAssertion( "EMAPA:16072") AnnotationAssertion( "FMA:293110") AnnotationAssertion( "NCIT:C28402") AnnotationAssertion(Annotation( "ncithesaurus:Primitive_Streak") "UMLS:C0033153") AnnotationAssertion( "VHOG:0001202") AnnotationAssertion(Annotation( "VHOG:0001202") "primitive streak - blastopore - germ ring") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004341") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "primitive streak") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/f/f4/Gray13.png"^^xsd:anyURI) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (cardinal vein) AnnotationAssertion(Annotation( "MP:0004783") "Any of the four veins in the developing vertebrate embryo which run along each side of the vertebral column.") AnnotationAssertion( "current we conflate the cardinal vein and cardinal vein system") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001197") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0072528305 Kardong KV, Vertebrates: Comparative Anatomy, Function, Evolution (2006) p.462") "In primitive vertebrates, the basic early embryonic pattern is retained, and blood from anterior and posterior systemic tissues is returned in anterior and posterior cardinal veins, both pairs of veins uniting in common cardinal veins near the heart. In derived vertebrates, the cardinals appear but usually persist only in the embryo, being functionally replaced by alternative adult vessels, the precava and postcava (anterior and posterior venae cavae).[well established][VHOG]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0011022") AnnotationAssertion( "BTO:0004385") AnnotationAssertion( "EHDAA2:0000213") AnnotationAssertion( "EHDAA:1310") AnnotationAssertion( "EMAPA:16354") AnnotationAssertion( "NCIT:C34116") AnnotationAssertion(Annotation( "ncithesaurus:Cardinal_Vein") "UMLS:C0231085") AnnotationAssertion( "VHOG:0001197") AnnotationAssertion( "XAO:0000052") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0004385") "Cuvierian vein") AnnotationAssertion(Annotation( "BTO:0004385") "cardinal sinus") AnnotationAssertion(Annotation( "EHDAA2:0000213") "cardinal vein system") AnnotationAssertion( "UBERON:0004344") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "cardinal vein") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (trophectoderm) AnnotationAssertion(Annotation( "MP:0005028") "Outermost layer of cells in the blastodermic vesicle, which will develop into the trophoblast layer and then contact the endometrium and take part in establishing the embryo's means of nutrition.") AnnotationAssertion( "distinction between trophectoderm and trophoblast unclear/inconsistent in many sources") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000979") Annotation( "VHOG"^^xsd:string) Annotation( ) "The outer cellular layer of the mammalian blastocyst. [Evolution, Fourth_Edition_(2006)_McGraw-Hill, Function, Vertebrates:_Comparative_Anatomy, p.750, see_Kardong_KV][VHOG]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000979") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0721676685 Romer AS, Parsons TS, Vertebrate body (1977) p.105-106") "(...) the trophoblast develops rapidly so that contact may be made with the maternal uterine tissues when conditions are appropriate. We have here an excellent example of an embryonic adaptation, the development of a structure never present in either adult or embryo of 'lower' vertebrates.[well established][VHOG]") AnnotationAssertion( "trophectodermal") AnnotationAssertion(Annotation( "BTO"^^xsd:string) "BTO has this has part of the trophoblast") AnnotationAssertion( "BTO:0001840") AnnotationAssertion( "EHDAA2:0002091") AnnotationAssertion( "EHDAA:56") AnnotationAssertion( "EMAPA:16046") AnnotationAssertion( "VHOG:0000979") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004345") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "trophectoderm") SubClassOf(Annotation( "EHDAA2"^^xsd:string) ) SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (gubernaculum (male or female)) AnnotationAssertion(Annotation( ) Annotation( "MP:0005149") "Embryonic structures which begin as undifferentiated mesenchyme attaching to the caudal end of the gonads. The gubernaculum is present only during the development of the urinary and reproductive organs, being replaced by distinct vestiges in males and females[WP]. Enitoinguinal ligaments that, in the male, connect the fetal testis to the developing scrotum, and, in the female, connect the ovaries to the uterus[MP].") AnnotationAssertion(Annotation( "primordium does not develop") Annotation( "ISBN:0123971756") ) AnnotationAssertion( "gubernacular") AnnotationAssertion(Annotation( "MA"^^xsd:string) "WP def is male/female, split term? EMAP is male-specific. vestigial adult in FMA. TODO") AnnotationAssertion( "UBERON:0000452") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "NCIT:C82952") AnnotationAssertion(Annotation( "ncithesaurus:Gubernaculum_Testis") "UMLS:C0228051") AnnotationAssertion(Annotation( ) "gubernaculum") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "Gabernaculum") AnnotationAssertion(Annotation( "EMAPA:19089") "caudal suspensory ligament") AnnotationAssertion(Annotation( ) "gubernaculae") AnnotationAssertion( "UBERON:0004346") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "gubernaculum (male or female)") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/7/76/Gray1138.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "MP"^^xsd:string) ) SubClassOf(Annotation( "BTO"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "Wikipedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (limb bud) AnnotationAssertion(Annotation( ) Annotation( ) Annotation( "ISBN:9780878932504") Annotation( "MP:0005650") "An outgrowth on the lateral trunk of the embryo that develops into a limb. The limb bud is divided into ectoderm and mesenchyme[cjm, modified from MP].") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0010375") Annotation( "AAO"^^xsd:string) Annotation( "AAO:EJS"^^xsd:string) "Early outgrowth of presumptive limb.[AAO]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010375") AnnotationAssertion( "BTO:0001640") AnnotationAssertion( "EMAPA:35944") AnnotationAssertion( "FMA:296780") AnnotationAssertion( "GAID:1307") AnnotationAssertion( "MESH:A16.254.462") AnnotationAssertion( "NCIT:C34203") AnnotationAssertion(Annotation( "ncithesaurus:Limb_Bud") "UMLS:C0282505") AnnotationAssertion( "XAO:0003161") AnnotationAssertion(Annotation( ) "limb buds") AnnotationAssertion(Annotation( "GO:0060174") "limbbud") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "gemmae membrorum") AnnotationAssertion( "UBERON:0004347") AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "developmentally_induced_by Fgf10, capable of initiating limb forming interactions between endoderm and mesoderm") AnnotationAssertion(rdfs:label "limb bud") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "ISBN:9780878932504") ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (optic eminence) AnnotationAssertion(Annotation( "MP:0006305") "The embryonic structure that gives rise to the corneal ectoderm.") AnnotationAssertion( "EHDAA:938") AnnotationAssertion( "EMAPA:16322") AnnotationAssertion( "RETIRED_EHDAA2:0001308") AnnotationAssertion( "VHOG:0001296") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004348") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "optic eminence") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (female inguinal canal) AnnotationAssertion(Annotation( ) Annotation( "MP:0008015") "An inguinal canal that is part of a female organism. Conveys the round ligament + the ilioinguinal nerve.[WP,unvetted].") AnnotationAssertion(Annotation( "MP") "in MP, this is implicitly part of female reproductive system, but not female genitalia") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:19171") AnnotationAssertion( "MA:0003249") AnnotationAssertion( "inguinal canal of female") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004353") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "female inguinal canal") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (male inguinal canal) AnnotationAssertion(Annotation( ) Annotation( "MP:0008016") "An inguinal canal that is part of a male organism. Conveys the spermatic cord and its coverings + the ilioinguinal nerve.[WP,unvetted].") AnnotationAssertion(Annotation( "MP") "in MP, this is implicitly part of male reproductive system, but not male genitalia") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:26913") AnnotationAssertion( "MA:0003256") AnnotationAssertion( "inguinal canal of male") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004354") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "male inguinal canal") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete podocyte foot process) AnnotationAssertion( "GO:0098846") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004355") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "obsolete podocyte foot process") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (apical ectodermal ridge) AnnotationAssertion(Annotation( ) Annotation( "MP:0001676") "Multilayered ectodermal region at the distal tip of a limb or fin bud necessary for the proper development of the underlying mesenchyme[MP,modified]. Along with the zone of polarizing activity, it is a crucial organizing region during limb development[WP].") AnnotationAssertion( "note that media, dorsal fins etc have AERs.") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0010760") Annotation( "AAO"^^xsd:string) Annotation( "AAO:EJS"^^xsd:string) "Distal ectodermal thickening which forms along the anterior-posterior limb axis. Signaling from this region influences proximal-distal patterning of the limb. Structure is missing in some lineages (salamanders, Eleutherodactylus coqui) however morphologically their indistinct distal ectoderm may still be involved in signaling.[AAO]") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0002146") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "Proliferative region that is part of the developing fin fold or fin.[TAO]") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0002146") Annotation( "TAO"^^xsd:string) "relationship loss: subclass proliferative region (TAO:0000098)[TAO]") AnnotationAssertion(Annotation( ) "The AER of tetrapods regresses after specification of skeletal progenitors, the AER of teleosts form an elongating fin fold") AnnotationAssertion( "maintaining mesenchyme in plastic proliferating state; maintaining expression of A-P axis genes; interacting with D-V proteins. Genes: AER induced by Fgf10 in mesenchyme. AER secretes Fgf8, which stimulates mitosis in the mesenchyme causing Fgf10 production - positive feedback loop") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010760") AnnotationAssertion( "EMAPA:32744") AnnotationAssertion( "NCIT:C34109") AnnotationAssertion( "TAO:0002146") AnnotationAssertion(Annotation( "ncithesaurus:Apical_Ectodermal_Ridge") "UMLS:C1516037") AnnotationAssertion( "XAO:0004121") AnnotationAssertion( "ZFA:0001702") AnnotationAssertion(Annotation( "XAO:0004121") "apical epidermal ridge") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "MP:0001676") "AER") AnnotationAssertion(Annotation( ) Annotation( ) "crista ectodermalis apicalis") AnnotationAssertion( "UBERON:0004356") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "apical ectodermal ridge") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/5/56/Limbbuddiagram.jpg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (paired limb/fin bud) AnnotationAssertion(Annotation( ) Annotation( "ISBN:9780878932504") Annotation( "MP:0005650") "An outgrowth on the lateral trunk of the embryo that develops into a limb or paired fin. The limb/fin bud is divided into ectoderm and mesenchyme[cjm, modified from MP].") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001258") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "DOI:10.1002/jez.1100 Wagner GP, Chiu C, The tetrapod limb: A hypothesis on its origin. J Exp Zool (Mol Dev Evol) (2001)") "The tetrapod limb is derived from a posterior part of the fin endoskeleton of elasmobranchs and basal bony fish, the so-called metapterygium, a series of endoskeletal elements that is the first to form in the developing paired fins. (...) In addition, there is an independent endoskeletal element called the protopterygium that develops anterior to the metapterygium in many basal fishes (e.g., the bichir and sturgeon). Teleosts have lost the metapterygium whereas the sarcopterygians, on the other hand, have lost the protopterygium. Sarcopterygians thus develop all their endoskeletal structures from the metapterygium and consequently the tetrapod limb skeleton is derived from the metapterygium.[uncertain][VHOG]") AnnotationAssertion( "VHOG:0001258") AnnotationAssertion(Annotation( "VHOG:0001258") "limb - fin bud") AnnotationAssertion( "paired appendage bud") AnnotationAssertion(Annotation( "VHOG:0001258") "paired limb/fin bud") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004357") AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "Genes: In limb buds of chick and mouse, Shh expression is activated as soon as there is a morphological bud, whereas in S. canicula fin buds, consistent with reported data in other cartilaginous fishes, Shh is transcribed late in fin development[PMID:17187056]") AnnotationAssertion(rdfs:label "paired limb/fin bud") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (caput epididymis) AnnotationAssertion(Annotation( "MP:0002660") "The head of the epididymis.") AnnotationAssertion(Annotation( "WP"^^xsd:string) "The head of the epididymis receives spermatozoa via the efferent ducts of the mediastinum of the testis. It is characterized histologically by a thin myoepithelium. The concentration of the sperm here is dilute") AnnotationAssertion(Annotation( "MP:0002660") "caput") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0000336") AnnotationAssertion( "EMAPA:19291") AnnotationAssertion( "FMA:18259") AnnotationAssertion( "MA:0002762") AnnotationAssertion( "NCIT:C32717") AnnotationAssertion(Annotation( "ncithesaurus:Head_of_the_Epididymis") "UMLS:C0228023") AnnotationAssertion(Annotation( "FMA:18259") "epididymal head") AnnotationAssertion(Annotation( "FMA:18259") "epididymis head") AnnotationAssertion(Annotation( "FMA:18259") "epidymis head") AnnotationAssertion(Annotation( "FMA:18259") "head of epididymis") AnnotationAssertion( "head of epidymis") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0000336") "caput epididymidis") AnnotationAssertion( "UBERON:0004358") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "caput epididymis") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (corpus epididymis) AnnotationAssertion(Annotation( "MP:0002661") "The body of the epididymis.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0000209") AnnotationAssertion( "EMAPA:19293") AnnotationAssertion( "FMA:18260") AnnotationAssertion( "MA:0002764") AnnotationAssertion( "NCIT:C32217") AnnotationAssertion(Annotation( "ncithesaurus:Body_of_the_Epididymis") "UMLS:C0228022") AnnotationAssertion(Annotation( "FMA:18260") "body of epididymis") AnnotationAssertion( "body of epidymis") AnnotationAssertion(Annotation( "FMA:18260") "epididymal body") AnnotationAssertion(Annotation( "FMA:18260") "epididymis body") AnnotationAssertion( "epidymis body") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0000209") "corpus epididymidis") AnnotationAssertion( "UBERON:0004359") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "corpus epididymis") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (cauda epididymis) AnnotationAssertion(Annotation( "MP:0002662") "The tail of the epididymis.") AnnotationAssertion(Annotation( "WP"^^xsd:string) "This has a thicker myoepithelium than the head region, as it is involved in absorbing fluid to make the sperm more concentrated.") AnnotationAssertion(Annotation( "MP:0002662") "corpus") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0000210") AnnotationAssertion( "EMAPA:19292") AnnotationAssertion( "FMA:18261") AnnotationAssertion( "MA:0002763") AnnotationAssertion( "NCIT:C33732") AnnotationAssertion(Annotation( "ncithesaurus:Tail_of_the_Epididymis") "UMLS:C0228024") AnnotationAssertion(Annotation( "BTO:0000210") "cauda epididymidis") AnnotationAssertion(Annotation( "BTO:0000210") "epididymal cauda") AnnotationAssertion(Annotation( "FMA:18261") "epididymal tail") AnnotationAssertion(Annotation( "FMA:18261") "epididymis tail") AnnotationAssertion( "epidymis tail") AnnotationAssertion(Annotation( "FMA:18261") "tail of epididymis") AnnotationAssertion( "tail of epidymis") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004360") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "cauda epididymis") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (stylohyoid ligament) AnnotationAssertion(Annotation( ) Annotation( "MP:0009918") "The fibrous cord that connects the tip of the styloid process of the temporal bone to the lesser horn of the hyoid bone.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:72308") AnnotationAssertion( "MA:0002957") AnnotationAssertion(Annotation( ) "ligamentum stylohyoideum") AnnotationAssertion(Annotation( ) "ligamentum stylohyoideus") AnnotationAssertion(Annotation( "MA:0002957") "stylo-hyoid ligament") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004361") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "stylohyoid ligament") SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ) SubClassOf(Annotation( "Wikipedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "Wikipedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "MP-implied-by-def") ObjectSomeValuesFrom( )) # Class: (pharyngeal arch 1) AnnotationAssertion(Annotation( ) "The first of the series of pharyngeal arches that develop into jaw bones or their homologs, and their associated nerves and arteries.") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0010364") Annotation( "AAO"^^xsd:string) Annotation( "XAO:EJS") "The first of the series of bony or cartilaginous arches that develop in the walls of the mouth cavity and pharynx of the embryo.[AAO]") AnnotationAssertion(Annotation( "MP:0006337,MGI:smb") "the first arch which contributes to development of mastication muscles, maxilla, mandible, incus, malleus, Meckel's cartilage, trigeminal nerve, and maxillary artery") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000296") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "DOI:10.1111/j.1469-7580.2005.00472.x Graham A, Okabe M and Quinlan R, The role of the endoderm in the development and evolution of the pharyngeal arches. J Anat (2005)") "A conserved feature of all vertebrate embryos is the presence of a series of bulges on the lateral surface of the head, the pharyngeal arches; it is within these structures that the nerves, muscles and skeletal components of the pharyngeal apparatus are laid down. The pharyngeal arches are separated by endodermal outpocketings, the pharyngeal pouches.[well established][VHOG]") AnnotationAssertion( "1"^^xsd:nonNegativeInteger) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010364") AnnotationAssertion( "CALOHA:TS-2089") AnnotationAssertion( "EHDAA2:0000006") AnnotationAssertion( "EHDAA:573") AnnotationAssertion( "EMAPA:16118") AnnotationAssertion( "FMA:293019") AnnotationAssertion( "MFMO:0000095") AnnotationAssertion( "NCIT:C34175") AnnotationAssertion( "TAO:0001595") AnnotationAssertion(Annotation( "ncithesaurus:First_Pharyngeal_Arch") "UMLS:C1517197") AnnotationAssertion( "VHOG:0000296") AnnotationAssertion( "XAO:0000097") AnnotationAssertion( "ZFA:0001612") AnnotationAssertion( "1st pharyngeal arch") AnnotationAssertion(Annotation( ) "branchial arch 1") AnnotationAssertion(Annotation( ) "first branchial arch") AnnotationAssertion( "first pharyngeal arch") AnnotationAssertion(Annotation( ) "first visceral arch") AnnotationAssertion( "mandibular arch") AnnotationAssertion(Annotation( ) "visceral arch 1") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "EHDAA2:0000006") "1st arch") AnnotationAssertion(Annotation( "VHOG:0000296") "1st visceral arch") AnnotationAssertion(Annotation( ) Annotation( ) "arcus pharyngeus primus") AnnotationAssertion( "UBERON:0004362") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "pharyngeal arch 1") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/2/2d/Gray48.png"^^xsd:anyURI) SubClassOf( ) # Class: (pharyngeal arch artery) AnnotationAssertion(Annotation( "MP:0002672") "One of a series of paired embryological vascular structures formed within a pharyngeal arch; in the adult, some of these vessels give rise to the great vessels[MP].") AnnotationAssertion( "add specific artery derivatives") AnnotationAssertion( "Do not confuse with arch of aorta.") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000122") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( ) "Paired vessels arching from the ventral to the dorsal aorta through the pharyngeal arches. [TFD][VHOG]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000122") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0030223693 Liem KF, Bemis WE, Walker WF, Grande L, Functional Anatomy of the Vertebrates: An Evolutionary Perspective (2001) p.620") "When vertebrates first appeared, they must have possessed a ventral and dorsal aorta with aortic arches between them.[well established][VHOG]") AnnotationAssertion( "Number varies - Lampreys have 8, hagfishes 15; only up to 6 appear in embryonic development in most gnathostome fishes and all tetrapods") AnnotationAssertion( "The third, fourth, and sixth arches, along with the seventh intersegmental arteries and the left dorsal aorta, are the primary contributors to the normal aortic arch and its major thoracic branches") AnnotationAssertion( "UBERON:0004342") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010414") AnnotationAssertion( "EFO:0003695") AnnotationAssertion( "EHDAA2:0000186") AnnotationAssertion( "EHDAA:398") AnnotationAssertion( "EHDAA:7327") AnnotationAssertion( "EMAPA:16684") AnnotationAssertion( "NCIT:C32123") AnnotationAssertion( "TAO:0005004") AnnotationAssertion(Annotation( "ncithesaurus:Aortic_Arch") "UMLS:C0003489") AnnotationAssertion( "VHOG:0000122") AnnotationAssertion( "XAO:0000341") AnnotationAssertion( "ZFA:0005004") AnnotationAssertion(Annotation( "MP:0002672") Annotation( ) "PAA") AnnotationAssertion(Annotation( "ZFA:0005004") "aortic arch") AnnotationAssertion(Annotation( "ZFA:0005004") Annotation( ) "aortic arches") AnnotationAssertion(Annotation( "ZFIN:ZDB-PUB-080512-6") Annotation( ) "branchial aortic arches") AnnotationAssertion(Annotation( "EMAPA:16684") "branchial arch artery") AnnotationAssertion(Annotation( "EMAPA:16684") Annotation( "MP:0002672") "embryonic aortic arch artery") AnnotationAssertion(Annotation( "MP:0002672") "pharyngeal arch artery") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "a. arcuum pharyngeorum") AnnotationAssertion(Annotation( "EMAPA:16684") "aortic arch artery") AnnotationAssertion(Annotation( ) Annotation( ) "arteriae arcuum pharyngeorum") AnnotationAssertion(Annotation( "ZFA:0005004") Annotation( "ZFIN:ZDB-PUB-080512-6") Annotation( ) "branchial aortic arches") AnnotationAssertion(Annotation( ) "pharyngeal arch arteries") AnnotationAssertion(Annotation( "VHOG:0000122") "pharyngeal arch artery") AnnotationAssertion( "UBERON:0004363") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "pharyngeal arch artery") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/8/84/Gray473.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "ZFA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (ectoplacental cone) AnnotationAssertion(Annotation( ) Annotation( "MP:0001717") "Thickened trophoblast of the blastocyst in rodents that becomes the fetal portion of the placenta.") AnnotationAssertion(Annotation( ) "derivative of the early postimplantation trophoblast, which probably gives rise to the spongiotrophoblast.") AnnotationAssertion( "BTO:0001715") AnnotationAssertion( "EMAPA:16059") AnnotationAssertion( "epamniotic cone") AnnotationAssertion( "placenta - ectoplacental cone") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004364") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "ectoplacental cone") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (vitelline blood vessel) AnnotationAssertion(Annotation( ) "Blood vessel that is connected to the yolk sac.") AnnotationAssertion( "EMAPA:36494") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004365") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "vitelline blood vessel") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (extraembryonic ectoderm) AnnotationAssertion(Annotation( "MP:0002583") "Layer of the endoderm of the extraembryonic tissue.") AnnotationAssertion( "we make the germ layer relationship develops_from, as currently the germ layers are declared to be purely embryonic. TODO - check. WP:Amnion - In the human embryo the earliest stages of the formation of the amnion have not been observed; in the youngest embryo which has been studied the amnion was already present as a closed sac, and appears in the inner cell-mass as a cavity. This cavity is roofed in by a single stratum of flattened, ectodermal cells, the amniotic ectoderm, and its floor consists of the prismatic ectoderm of the embryonic disk-the continuity between the roof and floor being established at the margin of the embryonic disk. Outside the amniotic ectoderm is a thin layer of mesoderm, which is continuous with that of the somatopleure and is connected by the body-stalk with the mesodermal lining of the chorion.") AnnotationAssertion( "EMAPA:16065") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004366") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "extraembryonic ectoderm") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (Descemet's membrane) AnnotationAssertion(Annotation( ) Annotation( "MP:0004285") "A transparent homogeneous acellular layer found between the substantia propria and the endothelial layer of the cornea[MP].") AnnotationAssertion(Annotation( "2016-05-01") Annotation( "TAO:0002157") Annotation( "ZFIN") Annotation( ) Annotation( "ZFIN:ZDB-PUB-061010-3") "Acellular anatomical structure composed of collagen, Descemet's membrane is secreted as a basement membrane of the corneal endothelium. Located between the stroma and the corneal endothelium, it is approximately 0.15 micrometer thick at 6 months post-fertilization.[ZFIN]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:18804") AnnotationAssertion( "FMA:58309") AnnotationAssertion( "GAID:894") AnnotationAssertion( "MA:0001246") AnnotationAssertion( "MESH:D003886") AnnotationAssertion( "NCIT:C32454") AnnotationAssertion( "TAO:0002157") AnnotationAssertion(Annotation( "ncithesaurus:Descemet_s_Membrane") "UMLS:C0011665") AnnotationAssertion( "ZFA:0001686") AnnotationAssertion( "Descemet membrane") AnnotationAssertion(Annotation( "FMA:58309") "Descemet's posterior elastic lamina") AnnotationAssertion(Annotation( "FMA:58309") "lamina limitans posterior") AnnotationAssertion(Annotation( "FMA:58309") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "lamina limitans posterior corneae") AnnotationAssertion(Annotation( "MA:0001246") "posterior limiting lamina") AnnotationAssertion(Annotation( "FMA:58309") "posterior limiting lamina of cornea") AnnotationAssertion(Annotation( "ZFA:0001686") "posterior limiting membrane") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004367") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "The strong, resistant, thin, noncellular fourth layer of the cornea, located between the endothelium (from which it is secreted) and the stroma. (Cline et al., Dictionary of Visual Science, 4th ed)") AnnotationAssertion(rdfs:label "Descemet's membrane") AnnotationAssertion(rdfs:seeAlso "https://github.com/obophenotype/uberon/issues/15"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "Cline et al") ObjectSomeValuesFrom( )) DisjointClasses(Annotation( "lexical"^^xsd:string) ) # Class: (Reichert's cartilage) AnnotationAssertion(Annotation( ) Annotation( "MP:0004916") "A continuous cartilaginous formation in mesenchyme of the second pharyngeal arch in the embryo. The longer cranial or styloid segment is continuous with the otic capsule; its inferior end is angulated and is situated very close to the oropharynx. The smaller caudal segment is in contact with the body and greater horn of the hyoid cartilaginous structure.") AnnotationAssertion( "Classically defined as: a structure... develop the stapes, the styloid processes, the stylohyoid ligaments, and the lesser cornua of the hyoid bone; its proximal end gives rise to the stylohyoid ligament. Relationship to stapes disputed.") AnnotationAssertion(Annotation( "EHDAA2"^^xsd:string) "in EHDAA2 this also develops from 3rd arch Mes from NC") AnnotationAssertion( "EHDAA2:0000793") AnnotationAssertion( "EMAPA:17622") AnnotationAssertion( "FMA:295800") AnnotationAssertion( "Reichert cartilage") AnnotationAssertion(Annotation( "MP:0004916") "hyaloid cartilage") AnnotationAssertion(Annotation( "EHDAA2:0000793") "hyoid cartilage") AnnotationAssertion( "second branchial arch cartilage") AnnotationAssertion(Annotation( "MP:0004916") "second pharyngeal arch cartilage") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004368") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "Reichert's cartilage") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (Reichert's membrane) AnnotationAssertion(Annotation( ) Annotation( "MP:0003954") "An nonvascular extraembryonic basement membrane that forms on the inner surface of the trophectoderm during placenta morphogenesis and is secreted by the distal parietal endoderm; required for the maternofetal exchange of nutrients and is important for the postgastrulation development[MP]. a thick multilayered basement membrane between the parietal endoderm cells and the trophoblast cells.") AnnotationAssertion( "EMAPA:16057") AnnotationAssertion( "FMA:276826") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004369") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "Reichert's membrane") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (anterior limiting lamina of cornea) AnnotationAssertion(Annotation( "ncithesaurus:Bowman_s_Membrane") "A transparent homogeneous acellular layer, 6 to 9 um thick, lying between the basal lamina of the outer layer of stratified epithelium and the substantia propria of the cornea; it is considered to be a basement membrane.") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0002155") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:ZDB-PUB-061010-3") "Acellular anatomical structure that is the zone of collagen fibers adjacent the basement membrane of the corneal epithelium.[TAO]") AnnotationAssertion( "Compared to terrestial animals, the cornea of zebrafish is relatively flat. It consists of nonpigmented, stratified squamous nonkeratinizing epithelial cells, attached to a thick basement membrane that is considered to be analogous to the Bowman's membrane in mammals") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:58273") AnnotationAssertion( "MA:0001240") AnnotationAssertion( "NCIT:C32226") AnnotationAssertion( "TAO:0002155") AnnotationAssertion(Annotation( "ncithesaurus:Bowman_s_Membrane") "UMLS:C0229127") AnnotationAssertion( "ZFA:0001684") AnnotationAssertion(Annotation( "FMA:58273") "Bowman's anterior elastic lamina") AnnotationAssertion(Annotation( "FMA:58273") "Bowman's layer") AnnotationAssertion(Annotation( "FMA:58273") "Bowman's membrane") AnnotationAssertion(Annotation( "ZFA:0001684") "anterior elastic lamina") AnnotationAssertion(Annotation( "MA:0001240") "anterior limiting lamina") AnnotationAssertion(Annotation( "FMA:58273") "anterior limiting lamina of cornea") AnnotationAssertion(Annotation( "FMA:58273") "lamina limitans anterior (cornea)") AnnotationAssertion(Annotation( "FMA:58273") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "lamina limitans anterior corneae") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "Reichert's membrane") AnnotationAssertion(Annotation( "ZFA:0001684") "anterior limiting membrane") AnnotationAssertion( "UBERON:0004370") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "anterior limiting lamina of cornea") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (vitelline vasculature) AnnotationAssertion(Annotation( ) "Vascular network that is connected to the yolk sac.") AnnotationAssertion( ) AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "omphalomesenteric system") AnnotationAssertion(Annotation( ) "vitelline bloos vessel system") AnnotationAssertion(Annotation( ) "vitelline system") AnnotationAssertion( "UBERON:0004374") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "vitelline vasculature") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (bone of free limb or fin) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A bone that is part of an appendage [Automatically generated definition].") AnnotationAssertion( "appendage bone") AnnotationAssertion( "bone of appendage") AnnotationAssertion( "bone of free segment of appendicular skeleton") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004375") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "bone of free limb or fin") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (distal metaphysis) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A metaphysis that is in the distal side of a diaphysis.") AnnotationAssertion( "FMA:32824") AnnotationAssertion(Annotation( "FMA:32824") "distal diaphyseal end of long bone") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004377") AnnotationAssertion(rdfs:label "distal metaphysis") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (proximal metaphysis) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A metaphysis that is in the proximal side of a diaphysis.") AnnotationAssertion( "FMA:32823") AnnotationAssertion(Annotation( "FMA:32823") "proximal diaphyseal end of long bone") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004378") AnnotationAssertion(rdfs:label "proximal metaphysis") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (distal epiphysis) AnnotationAssertion(Annotation( ) "An epiphysis that is on the distal side of the bone.") AnnotationAssertion( ) AnnotationAssertion( "FMA:32822") AnnotationAssertion(Annotation( "FMA:32822") "distal end of long bone") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004379") AnnotationAssertion(rdfs:label "distal epiphysis") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (proximal epiphysis) AnnotationAssertion(Annotation( ) "An epiphysis that is on the proximal side of the bone.") AnnotationAssertion( ) AnnotationAssertion( "FMA:32821") AnnotationAssertion(Annotation( "FMA:32821") "proximal end of long bone") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004380") AnnotationAssertion(rdfs:label "proximal epiphysis") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (skeleton of limb) AnnotationAssertion(Annotation( ) "The collection of all skeletal elements in an individual limb.") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "VSAO:0000300") Annotation( "VSAO"^^xsd:string) Annotation( "GO_REF:0000034, http://dx.plos.org/10.1371/journal.pone.0051070") "Skeletal subdivision that is part of the limb.[VSAO]") AnnotationAssertion(Annotation( "EHDAA2"^^xsd:string) "EHDAA2 considers hip and shoulder joints part of limb skeleton.") AnnotationAssertion( "EHDAA2:0002221") AnnotationAssertion( "EMAPA:32702") AnnotationAssertion( "VSAO:0000300") AnnotationAssertion(Annotation( "VSAO:0000300") "free limb skeleton") AnnotationAssertion(Annotation( "EHDAA2:0002221") "limb skeleton") AnnotationAssertion( "set of bones of limb") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004381") AnnotationAssertion(rdfs:label "skeleton of limb") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (epiphysis of humerus) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An epiphysis that is part of a humerus [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( "FMA:32825") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "humeral epiphysis") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004382") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "epiphysis of humerus") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (epiphysis of tibia) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An epiphysis that is part of a tibia [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37771") AnnotationAssertion( "FMA:33112") AnnotationAssertion( "MA:0003113") AnnotationAssertion(Annotation( "FMA:33112") "tibial epiphysis") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004383") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "epiphysis of tibia") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (epiphysis of femur) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An epiphysis that is part of a femur [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37539") AnnotationAssertion( "FMA:32838") AnnotationAssertion( "MA:0003056") AnnotationAssertion(Annotation( "FMA:32838") "femoral epiphysis") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004384") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "epiphysis of femur") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (epiphysis of radius) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An epiphysis that is part of a radius [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( "FMA:33770") AnnotationAssertion(Annotation( "FMA:33770") "radial epiphysis") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004385") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "epiphysis of radius") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (epiphysis of ulna) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An epiphysis that is part of an ulna [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( "FMA:33748") AnnotationAssertion(Annotation( "FMA:33748") "ulnar epiphysis") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004386") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "epiphysis of ulna") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (epiphysis of phalanx of manus) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An epiphysis that is part of a phalanx of a manus [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( "FMA:240707") AnnotationAssertion( "epiphysis of phalanx of finger") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:240707") "epiphysis of phalanx of hand") AnnotationAssertion( "UBERON:0004387") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "epiphysis of phalanx of manus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (epiphysis of fibula) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An epiphysis that is part of a fibula [Automatically generated definition].") AnnotationAssertion( "FMA:33726") AnnotationAssertion(Annotation( "FMA:33726") "fibula epiphysis") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004388") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "epiphysis of fibula") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (epiphysis of metatarsal bone) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An epiphysis that is part of a metatarsal bone [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( "FMA:33814") AnnotationAssertion( "epiphysis of metatarsal") AnnotationAssertion(Annotation( "FMA:33814") "metatarsal bone epiphysis") AnnotationAssertion( "metatarsal epiphysis") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004389") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "epiphysis of metatarsal bone") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (epiphysis of metacarpal bone) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An epiphysis that is part of a metacarpal bone [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( "FMA:33792") AnnotationAssertion( "epiphysis of metacarpal") AnnotationAssertion(Annotation( "FMA:33792") "metacarpal bone epiphysis") AnnotationAssertion( "metacarpal epiphysis") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004390") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "epiphysis of metacarpal bone") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (epiphysis of first metacarpal bone) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An epiphysis that is part of a metacarpal bone of digit 1 [Automatically generated definition].") AnnotationAssertion( "FMA:33793") AnnotationAssertion(Annotation( "FMA:33793") "first metacarpal bone epiphysis") AnnotationAssertion( "metacarpal 1 epiphysis") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004391") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "epiphysis of first metacarpal bone") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (epiphysis of second metacarpal bone) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An epiphysis that is part of a metacarpal bone of digit 2 [Automatically generated definition].") AnnotationAssertion( "FMA:33794") AnnotationAssertion( "metacarpal 2 epiphysis") AnnotationAssertion(Annotation( "FMA:33794") "second metacarpal bone epiphysis") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004392") AnnotationAssertion(rdfs:label "epiphysis of second metacarpal bone") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (epiphysis of third metacarpal bone) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An epiphysis that is part of a metacarpal bone of digit 3 [Automatically generated definition].") AnnotationAssertion( "FMA:86328") AnnotationAssertion( "metacarpal 3 epiphysis") AnnotationAssertion(Annotation( "FMA:86328") "third metacarpal bone epiphysis") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004393") AnnotationAssertion(rdfs:label "epiphysis of third metacarpal bone") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (epiphysis of fourth metacarpal bone) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An epiphysis that is part of a metacarpal bone of digit 4 [Automatically generated definition].") AnnotationAssertion( "FMA:86329") AnnotationAssertion(Annotation( "FMA:86329") "fourth metacarpal bone epiphysis") AnnotationAssertion( "metacarpal 4 epiphysis") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004394") AnnotationAssertion(rdfs:label "epiphysis of fourth metacarpal bone") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (epiphysis of first metatarsal bone) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An epiphysis that is part of a metatarsal bone of digit 1 [Automatically generated definition].") AnnotationAssertion( "FMA:33815") AnnotationAssertion(Annotation( "FMA:33815") "first metatarsal bone epiphysis") AnnotationAssertion( "metatarsal 1 epiphysis") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004395") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "epiphysis of first metatarsal bone") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (epiphysis of second metatarsal bone) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An epiphysis that is part of a metatarsal bone of digit 2 [Automatically generated definition].") AnnotationAssertion( "FMA:33816") AnnotationAssertion( "metatarsal 2 epiphysis") AnnotationAssertion(Annotation( "FMA:33816") "second metatarsal bone epiphysis") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004396") AnnotationAssertion(rdfs:label "epiphysis of second metatarsal bone") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (epiphysis of third metatarsal bone) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An epiphysis that is part of a metatarsal bone of digit 3 [Automatically generated definition].") AnnotationAssertion( "FMA:86313") AnnotationAssertion( "metatarsal 3 epiphysis") AnnotationAssertion(Annotation( "FMA:86313") "third metatarsal bone epiphysis") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004397") AnnotationAssertion(rdfs:label "epiphysis of third metatarsal bone") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (epiphysis of fourth metatarsal bone) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An epiphysis that is part of a metatarsal bone of digit 4 [Automatically generated definition].") AnnotationAssertion( "FMA:86314") AnnotationAssertion(Annotation( "FMA:86314") "fourth metatarsal bone epiphysis") AnnotationAssertion( "metatarsal 4 epiphysis") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004398") AnnotationAssertion(rdfs:label "epiphysis of fourth metatarsal bone") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (epiphysis of fifth metatarsal bone) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An epiphysis that is part of a metatarsal bone of digit 5 [Automatically generated definition].") AnnotationAssertion( "FMA:86315") AnnotationAssertion(Annotation( "FMA:86315") "fifth metatarsal bone epiphysis") AnnotationAssertion( "metatarsal 5 epiphysis") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004399") AnnotationAssertion(rdfs:label "epiphysis of fifth metatarsal bone") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (bone tissue of epiphysis) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A portion of bone tissue that is part of a epiphysis [Automatically generated definition].") AnnotationAssertion( "FMA:241364") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004400") AnnotationAssertion(rdfs:label "bone tissue of epiphysis") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (bone tissue of distal epiphysis) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A portion of bone tissue that is part of a distal epiphysis [Automatically generated definition].") AnnotationAssertion( "FMA:241374") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004401") AnnotationAssertion(rdfs:label "bone tissue of distal epiphysis") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (bone tissue of proximal epiphysis) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A portion of bone tissue that is part of a proximal epiphysis [Automatically generated definition].") AnnotationAssertion( "FMA:241372") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004402") AnnotationAssertion(rdfs:label "bone tissue of proximal epiphysis") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (periosteum of epiphysis) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A periosteum that is part of a epiphysis [Automatically generated definition].") AnnotationAssertion( "FMA:32687") AnnotationAssertion(Annotation( "FMA:32687") "epiphysis periosteum") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004403") AnnotationAssertion(rdfs:label "periosteum of epiphysis") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (distal epiphysis of humerus) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A distal epiphysis that is part of a humerus [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( "FMA:32826") AnnotationAssertion(Annotation( "FMA:32826") "distal end of humerus") AnnotationAssertion(Annotation( "FMA:32826") "lower end of humerus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004404") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "distal epiphysis of humerus") SubClassOf( ) SubClassOf( ) # Class: (distal epiphysis of tibia) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A distal epiphysis that is part of a tibia [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:33116") AnnotationAssertion(Annotation( "FMA:33116") "distal end of tibia") AnnotationAssertion(Annotation( "FMA:33116") "lower end of tibia") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004405") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "distal epiphysis of tibia") SubClassOf( ) SubClassOf( ) # Class: (distal epiphysis of femur) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A distal epiphysis that is part of a femur [Automatically generated definition].") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0000893") Annotation( "AAO"^^xsd:string) Annotation( "AAO:LAP"^^xsd:string) "Head of the femur that articulates with the tibia and fibula.[AAO]") AnnotationAssertion( ) AnnotationAssertion( "AAO:0000893") AnnotationAssertion( "FMA:32844") AnnotationAssertion(Annotation( ) Annotation( "OBOL:automatic"^^xsd:string) "distal femoral epiphysis") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "AAO:0000893") "distal head of femur") AnnotationAssertion( "UBERON:0004406") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "distal epiphysis of femur") SubClassOf( ) SubClassOf( ) # Class: (distal epiphysis of radius) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A distal epiphysis that is part of a radius [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:33776") AnnotationAssertion(Annotation( "FMA:33776") "distal end of radius") AnnotationAssertion(Annotation( "FMA:33776") "lower end of radius") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004407") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "distal epiphysis of radius") SubClassOf( ) SubClassOf( ) # Class: (distal epiphysis of ulna) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A distal epiphysis that is part of a ulna [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( "FMA:33754") AnnotationAssertion(Annotation( "FMA:33754") "distal end of ulna") AnnotationAssertion(Annotation( "FMA:33754") "lower end of ulna") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004408") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "distal epiphysis of ulna") SubClassOf( ) SubClassOf( ) # Class: (distal epiphysis of phalanx of manus) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A distal epiphysis that is part of a phalanx of manus [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( "FMA:226577") AnnotationAssertion( "distal epiphysis of phalanx of finger") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:226577") "distal end of phalanx of hand") AnnotationAssertion(Annotation( "FMA:226577") "distal epiphysis of phalanx of hand") AnnotationAssertion(Annotation( "FMA:226577") "head of phalanx of finger") AnnotationAssertion(Annotation( "FMA:226577") "head of phalanx of hand") AnnotationAssertion(Annotation( "FMA:226577") "ungual tuberosity of distal phalanx of finger") AnnotationAssertion( "UBERON:0004409") AnnotationAssertion(rdfs:label "distal epiphysis of phalanx of manus") SubClassOf( ) SubClassOf( ) # Class: (distal epiphysis of fibula) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A distal epiphysis that is part of a fibula [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:33732") AnnotationAssertion(Annotation( "FMA:33732") "distal end of fibula") AnnotationAssertion(Annotation( "FMA:33732") "lower end of fibula") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004410") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "distal epiphysis of fibula") SubClassOf( ) SubClassOf( ) # Class: (proximal epiphysis of humerus) AnnotationAssertion(Annotation( ) "The upper extremity of the humerus (proximal humerus) consists of a large rounded head joined to the body by a constricted portion called the neck, and two eminences, the greater and lesser tubercles.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:23362") AnnotationAssertion(Annotation( "FMA:23362") "proximal end of humerus") AnnotationAssertion(Annotation( ) Annotation( "OBOL:automatic"^^xsd:string) "proximal humeral epiphysis") AnnotationAssertion(Annotation( "FMA:23362") "upper end of humerus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "head of the humerus") AnnotationAssertion(Annotation( ) "humeral head") AnnotationAssertion(Annotation( ) "proximal humerus") AnnotationAssertion(Annotation( ) "upper extremity of humerus") AnnotationAssertion( "UBERON:0004411") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "proximal epiphysis of humerus") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/a/ad/Gray207.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) # Class: (proximal epiphysis of femur) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A proximal epiphysis that is part of a femur [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( "FMA:32841") AnnotationAssertion(Annotation( ) Annotation( "OBOL:automatic"^^xsd:string) "proximal femoral epiphysis") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "capital femoral epiphysis") AnnotationAssertion( "UBERON:0004412") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "proximal epiphysis of femur") SubClassOf( ) SubClassOf( ) # Class: (proximal epiphysis of radius) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A proximal epiphysis that is part of a radius [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:39780") AnnotationAssertion(Annotation( "FMA:39780") "proximal end of radius") AnnotationAssertion(Annotation( ) Annotation( "OBOL:automatic"^^xsd:string) "proximal radial epiphysis") AnnotationAssertion(Annotation( "FMA:39780") "upper end of radius") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004413") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "proximal epiphysis of radius") SubClassOf( ) SubClassOf( ) # Class: (proximal epiphysis of phalanx of manus) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A proximal epiphysis that is part of a phalanx of manus [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( "FMA:226482") AnnotationAssertion(Annotation( "FMA:226482") "basal epiphysis of phalanx of finger") AnnotationAssertion(Annotation( "FMA:226482") "base of phalanx of finger") AnnotationAssertion(Annotation( "FMA:226482") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "basis phalangis manus") AnnotationAssertion( "proximal epiphysis of phalanx of finger") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:226482") "proximal epiphysis of phalanx of hand") AnnotationAssertion( "UBERON:0004414") AnnotationAssertion(rdfs:label "proximal epiphysis of phalanx of manus") SubClassOf( ) SubClassOf( ) # Class: (proximal epiphysis of metatarsal bone) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A proximal epiphysis that is part of a metatarsal bone [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( "FMA:33817") AnnotationAssertion(Annotation( "FMA:33817") "base of metatarsal bone") AnnotationAssertion(Annotation( "FMA:33817") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "basis ossis metatarsi") AnnotationAssertion(Annotation( "FMA:33817") "proximal end of metatarsal bone") AnnotationAssertion(Annotation( "FMA:33817") "upper end of metatarsal bone") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004415") AnnotationAssertion(rdfs:label "proximal epiphysis of metatarsal bone") SubClassOf( ) SubClassOf( ) # Class: (proximal epiphysis of metacarpal bone) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A proximal epiphysis that is part of a metacarpal bone [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( "FMA:33795") AnnotationAssertion(Annotation( "FMA:33795") "base of metacarpal bone") AnnotationAssertion(Annotation( "FMA:33795") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "basis ossis metacarpi") AnnotationAssertion(Annotation( "FMA:33795") "metacarpal bone base") AnnotationAssertion(Annotation( "FMA:33795") "proximal end of metacarpal bone") AnnotationAssertion(Annotation( "FMA:33795") "upper end of metacarpal bone") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004416") AnnotationAssertion(rdfs:label "proximal epiphysis of metacarpal bone") SubClassOf( ) SubClassOf( ) # Class: (proximal epiphysis of phalanx of manual digit 1) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A proximal epiphysis that is part of a manual digit 1 phalanx [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( "FMA:37489") AnnotationAssertion(Annotation( "FMA:37489") "basal epiphysis of phalanx of thumb") AnnotationAssertion(Annotation( "FMA:37489") "base of phalanx of first digit of hand") AnnotationAssertion(Annotation( "FMA:37489") "base of phalanx of thumb") AnnotationAssertion( "proximal epiphysis of phalanx of manual digit 1") AnnotationAssertion(Annotation( ) Annotation( ) "proximal epiphysis of phalanx of manual digit I") AnnotationAssertion(Annotation( "FMA:37489") Annotation( "NCBITaxon:9606"^^xsd:string) Annotation( ) "proximal epiphysis of phalanx of thumb") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004417") AnnotationAssertion(rdfs:label "proximal epiphysis of phalanx of manual digit 1") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (proximal epiphysis of phalanx of manual digit 2) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A proximal epiphysis that is part of a manual digit 2 phalanx [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( "FMA:37498") AnnotationAssertion(Annotation( "FMA:37498") "basal epiphysis of phalanx of index finger") AnnotationAssertion(Annotation( "FMA:37498") "base of phalanx of index finger") AnnotationAssertion(Annotation( "FMA:37498") "base of phalanx of second digit of hand") AnnotationAssertion(Annotation( "FMA:37498") "base of phalanx of second finger") AnnotationAssertion( "proximal epiphysis of phalanx of manual digit 2") AnnotationAssertion(Annotation( ) Annotation( ) "proximal epiphysis of phalanx of manual digit II") AnnotationAssertion(Annotation( "FMA:37498") Annotation( "NCBITaxon:9606"^^xsd:string) Annotation( ) "proximal epiphysis of phalanx of index finger") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004418") AnnotationAssertion(rdfs:label "proximal epiphysis of phalanx of manual digit 2") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (proximal epiphysis of phalanx of manual digit 3) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A proximal epiphysis that is part of a manual digit 3 phalanx [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( "FMA:37510") AnnotationAssertion(Annotation( "FMA:37510") "basal epiphysis of phalanx of middle finger") AnnotationAssertion(Annotation( "FMA:37510") "base of phalanx of middle finger") AnnotationAssertion(Annotation( "FMA:37510") "base of phalanx of third digit of hand") AnnotationAssertion(Annotation( "FMA:37510") "base of phalanx of third finger") AnnotationAssertion( "proximal epiphysis of phalanx of manual digit 3") AnnotationAssertion(Annotation( ) Annotation( ) "proximal epiphysis of phalanx of manual digit III") AnnotationAssertion(Annotation( "FMA:37510") Annotation( "NCBITaxon:9606"^^xsd:string) Annotation( ) "proximal epiphysis of phalanx of middle finger") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004419") AnnotationAssertion(rdfs:label "proximal epiphysis of phalanx of manual digit 3") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (proximal epiphysis of phalanx of manual digit 4) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A proximal epiphysis that is part of a manual digit 4 phalanx [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( "FMA:37522") AnnotationAssertion(Annotation( "FMA:37522") "basal epiphysis of phalanx of ring finger") AnnotationAssertion(Annotation( "FMA:37522") "base of phalanx of fourth digit of hand") AnnotationAssertion(Annotation( "FMA:37522") "base of phalanx of fourth finger") AnnotationAssertion(Annotation( "FMA:37522") "base of phalanx of ring finger") AnnotationAssertion( "proximal epiphysis of phalanx of manual digit 4") AnnotationAssertion(Annotation( ) Annotation( ) "proximal epiphysis of phalanx of manual digit IV") AnnotationAssertion(Annotation( "FMA:37522") Annotation( "NCBITaxon:9606"^^xsd:string) Annotation( ) "proximal epiphysis of phalanx of ring finger") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004420") AnnotationAssertion(rdfs:label "proximal epiphysis of phalanx of manual digit 4") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (proximal epiphysis of phalanx of manual digit 5) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A proximal epiphysis that is part of a manual digit 5 phalanx [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( "FMA:37534") AnnotationAssertion(Annotation( "FMA:37534") "basal epiphysis of phalanx of fifth finger") AnnotationAssertion(Annotation( "FMA:37534") "basal epiphysis of phalanx of little finger") AnnotationAssertion(Annotation( "FMA:37534") "base of phalanx of fifth digit of hand") AnnotationAssertion(Annotation( "FMA:37534") "base of phalanx of fifth finger") AnnotationAssertion(Annotation( "FMA:37534") "base of phalanx of little finger") AnnotationAssertion( "proximal epiphysis of phalanx of manual digit 5") AnnotationAssertion(Annotation( ) Annotation( ) "proximal epiphysis of phalanx of manual digit V") AnnotationAssertion(Annotation( "FMA:37534") Annotation( "NCBITaxon:9606"^^xsd:string) Annotation( ) "proximal epiphysis of phalanx of little finger") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004421") AnnotationAssertion(rdfs:label "proximal epiphysis of phalanx of manual digit 5") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (proximal epiphysis of first metacarpal bone) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A proximal epiphysis that is part of a metacarpal bone of digit 1 [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( "FMA:42788") AnnotationAssertion(Annotation( "FMA:42788") "base of first metacarpal bone") AnnotationAssertion(Annotation( "FMA:42788") "first metacarpal bone base") AnnotationAssertion( "proximal epiphysis of metacarpal 1") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004422") AnnotationAssertion(rdfs:label "proximal epiphysis of first metacarpal bone") SubClassOf( ) SubClassOf( ) # Class: (proximal epiphysis of second metacarpal bone) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A proximal epiphysis that is part of a metacarpal bone of digit 2 [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( "FMA:42791") AnnotationAssertion(Annotation( "FMA:42791") "base of second metacarpal bone") AnnotationAssertion(Annotation( "FMA:42791") "proximal end of second metacarpal bone") AnnotationAssertion( "proximal epiphysis of metacarpal 2") AnnotationAssertion(Annotation( "FMA:42791") "second metacarpal bone base") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004423") AnnotationAssertion(rdfs:label "proximal epiphysis of second metacarpal bone") SubClassOf( ) SubClassOf( ) # Class: (proximal epiphysis of third metacarpal bone) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A proximal epiphysis that is part of a metacarpal bone of digit 3 [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( "FMA:42794") AnnotationAssertion(Annotation( "FMA:42794") "base of third metacarpal bone") AnnotationAssertion(Annotation( "FMA:42794") "proximal end of third metacarpal bone") AnnotationAssertion( "proximal epiphysis of metacarpal 3") AnnotationAssertion(Annotation( "FMA:42794") "third metacarpal bone base") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004424") AnnotationAssertion(rdfs:label "proximal epiphysis of third metacarpal bone") SubClassOf( ) SubClassOf( ) # Class: (proximal epiphysis of fourth metacarpal bone) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A proximal epiphysis that is part of a metacarpal bone of digit 4 [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( "FMA:42797") AnnotationAssertion(Annotation( "FMA:42797") "base of fourth metacarpal bone") AnnotationAssertion(Annotation( "FMA:42797") "fourth metacarpal bone base") AnnotationAssertion(Annotation( "FMA:42797") "proximal end of fourth metacarpal bone") AnnotationAssertion( "proximal epiphysis of metacarpal 4") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004425") AnnotationAssertion(rdfs:label "proximal epiphysis of fourth metacarpal bone") SubClassOf( ) SubClassOf( ) # Class: (proximal epiphysis of fifth metacarpal bone) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A proximal epiphysis that is part of a metacarpal bone of digit 5 [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( "FMA:42800") AnnotationAssertion(Annotation( "FMA:42800") "base of fifth metacarpal bone") AnnotationAssertion(Annotation( "FMA:42800") "fifth metacarpal bone base") AnnotationAssertion(Annotation( "FMA:42800") "proximal end of fifth metacarpal bone") AnnotationAssertion( "proximal epiphysis of metacarpal 5") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004426") AnnotationAssertion(rdfs:label "proximal epiphysis of fifth metacarpal bone") SubClassOf( ) SubClassOf( ) # Class: (proximal epiphysis of first metatarsal bone) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A proximal epiphysis that is part of a metatarsal bone of digit 1 [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( "FMA:42963") AnnotationAssertion(Annotation( "FMA:42963") "base of first metatarsal bone") AnnotationAssertion(Annotation( "FMA:42963") "proximal end of first metatarsal bone") AnnotationAssertion( "proximal epiphysis of metatarsal 1") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004427") AnnotationAssertion(rdfs:label "proximal epiphysis of first metatarsal bone") SubClassOf( ) SubClassOf( ) # Class: (proximal epiphysis of second metatarsal bone) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A proximal epiphysis that is part of a metatarsal bone of digit 2 [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( "FMA:42964") AnnotationAssertion(Annotation( "FMA:42964") "base of second metatarsal bone") AnnotationAssertion(Annotation( "FMA:42964") "proximal end of second metatarsal bone") AnnotationAssertion( "proximal epiphysis of metatarsal 2") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004428") AnnotationAssertion(rdfs:label "proximal epiphysis of second metatarsal bone") SubClassOf( ) SubClassOf( ) # Class: (proximal epiphysis of third metatarsal bone) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A proximal epiphysis that is part of a metatarsal bone of digit 3 [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( "FMA:42965") AnnotationAssertion(Annotation( "FMA:42965") "base of third metatarsal bone") AnnotationAssertion(Annotation( "FMA:42965") "proximal end of third metatarsal bone") AnnotationAssertion( "proximal epiphysis of metatarsal 3") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004429") AnnotationAssertion(rdfs:label "proximal epiphysis of third metatarsal bone") SubClassOf( ) SubClassOf( ) # Class: (proximal epiphysis of fourth metatarsal bone) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A proximal epiphysis that is part of a metatarsal bone of digit 4 [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( "FMA:42966") AnnotationAssertion(Annotation( "FMA:42966") "base of fourth metatarsal bone") AnnotationAssertion(Annotation( "FMA:42966") "proximal end of fourth metatarsal bone") AnnotationAssertion( "proximal epiphysis of metatarsal 4") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004430") AnnotationAssertion(rdfs:label "proximal epiphysis of fourth metatarsal bone") SubClassOf( ) SubClassOf( ) # Class: (proximal epiphysis of fifth metatarsal bone) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A proximal epiphysis that is part of a metatarsal bone of digit 5 [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( "FMA:42967") AnnotationAssertion(Annotation( "FMA:42967") "base of fifth metatarsal bone") AnnotationAssertion(Annotation( "FMA:42967") "proximal end of fifth metatarsal bone") AnnotationAssertion( "proximal epiphysis of metatarsal 5") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004431") AnnotationAssertion(rdfs:label "proximal epiphysis of fifth metatarsal bone") SubClassOf( ) SubClassOf( ) # Class: (proximal epiphysis of distal phalanx of manual digit 2) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A proximal epiphysis that is part of a distal phalanx of manual digit 2 [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( "FMA:37505") AnnotationAssertion(Annotation( "FMA:37505") "basal epiphysis of distal phalanx of index finger") AnnotationAssertion(Annotation( "FMA:37505") "base of distal phalanx of index finger") AnnotationAssertion(Annotation( "FMA:37505") "base of distal phalanx of second digit of hand") AnnotationAssertion(Annotation( "FMA:37505") "base of distal phalanx of second finger") AnnotationAssertion(Annotation( ) Annotation( ) "proximal epiphysis of distal phalanx of manual digit II") AnnotationAssertion(Annotation( "FMA:37505") Annotation( "NCBITaxon:9606"^^xsd:string) Annotation( ) "proximal epiphysis of distal phalanx of index finger") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004432") AnnotationAssertion(rdfs:label "proximal epiphysis of distal phalanx of manual digit 2") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (proximal epiphysis of distal phalanx of manual digit 3) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A proximal epiphysis that is part of a distal phalanx of manual digit 3 [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( "FMA:37517") AnnotationAssertion(Annotation( "FMA:37517") "base of distal phalanx of middle finger") AnnotationAssertion(Annotation( "FMA:37517") "base of distal phalanx of third digit of hand") AnnotationAssertion(Annotation( "FMA:37517") "base of distal phalanx of third finger") AnnotationAssertion(Annotation( ) Annotation( ) "proximal epiphysis of distal phalanx of manual digit III") AnnotationAssertion(Annotation( "FMA:37517") Annotation( "NCBITaxon:9606"^^xsd:string) Annotation( ) "proximal epiphysis of distal phalanx of middle finger") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004433") AnnotationAssertion(rdfs:label "proximal epiphysis of distal phalanx of manual digit 3") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (proximal epiphysis of distal phalanx of manual digit 4) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A proximal epiphysis that is part of a distal phalanx of manual digit 4 [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( "FMA:37529") AnnotationAssertion(Annotation( "FMA:37529") "basal epiphysis of distal phalanx of fourth finger") AnnotationAssertion(Annotation( "FMA:37529") "basal epiphysis of distal phalanx of ring finger") AnnotationAssertion(Annotation( "FMA:37529") "base of distal phalanx of fourth digit of hand") AnnotationAssertion(Annotation( "FMA:37529") "base of distal phalanx of fourth finger") AnnotationAssertion(Annotation( "FMA:37529") "base of distal phalanx of ring finger") AnnotationAssertion(Annotation( ) Annotation( ) "proximal epiphysis of distal phalanx of manual digit IV") AnnotationAssertion(Annotation( "FMA:37529") Annotation( "NCBITaxon:9606"^^xsd:string) Annotation( ) "proximal epiphysis of distal phalanx of ring finger") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004434") AnnotationAssertion(rdfs:label "proximal epiphysis of distal phalanx of manual digit 4") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (proximal epiphysis of distal phalanx of manual digit 5) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A proximal epiphysis that is part of a distal phalanx of manual digit 5 [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( "FMA:37541") AnnotationAssertion(Annotation( "FMA:37541") "basal epiphysis of distal phalanx of fifth finger") AnnotationAssertion(Annotation( "FMA:37541") "basal epiphysis of distal phalanx of little finger") AnnotationAssertion(Annotation( "FMA:37541") "base of distal phalanx of fifth digit of hand") AnnotationAssertion(Annotation( "FMA:37541") "base of distal phalanx of fifth finger") AnnotationAssertion(Annotation( "FMA:37541") "base of distal phalanx of little finger") AnnotationAssertion(Annotation( ) Annotation( ) "proximal epiphysis of distal phalanx of manual digit V") AnnotationAssertion(Annotation( "FMA:37541") Annotation( "NCBITaxon:9606"^^xsd:string) Annotation( ) "proximal epiphysis of distal phalanx of little finger") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004435") AnnotationAssertion(rdfs:label "proximal epiphysis of distal phalanx of manual digit 5") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (proximal epiphysis of middle phalanx of manual digit 2) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A proximal epiphysis that is part of a middle phalanx of manual digit 2 [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( "FMA:37502") AnnotationAssertion(Annotation( "FMA:37502") "basal epiphysis of middle phalanx of index finger") AnnotationAssertion(Annotation( "FMA:37502") "base of middle phalanx of index finger") AnnotationAssertion(Annotation( "FMA:37502") "base of middle phalanx of second digit of hand") AnnotationAssertion(Annotation( "FMA:37502") "base of middle phalanx of second finger") AnnotationAssertion(Annotation( ) Annotation( ) "proximal epiphysis of middle phalanx of manual digit II") AnnotationAssertion(Annotation( "FMA:37502") Annotation( "NCBITaxon:9606"^^xsd:string) Annotation( ) "proximal epiphysis of middle phalanx of index finger") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004436") AnnotationAssertion(rdfs:label "proximal epiphysis of middle phalanx of manual digit 2") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (proximal epiphysis of middle phalanx of manual digit 3) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A proximal epiphysis that is part of a middle phalanx of manual digit 3 [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( "FMA:37514") AnnotationAssertion(Annotation( "FMA:37514") "basal epiphysis of middle phalanx of middle finger") AnnotationAssertion(Annotation( "FMA:37514") "base of middle phalanx of middle finger") AnnotationAssertion(Annotation( "FMA:37514") "base of middle phalanx of third digit of hand") AnnotationAssertion(Annotation( "FMA:37514") "base of middle phalanx of third finger") AnnotationAssertion(Annotation( ) Annotation( ) "proximal epiphysis of middle phalanx of manual digit III") AnnotationAssertion(Annotation( "FMA:37514") Annotation( "NCBITaxon:9606"^^xsd:string) Annotation( ) "proximal epiphysis of middle phalanx of middle finger") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004437") AnnotationAssertion(rdfs:label "proximal epiphysis of middle phalanx of manual digit 3") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (proximal epiphysis of middle phalanx of manual digit 4) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A proximal epiphysis that is part of a middle phalanx of manual digit 4 [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( "FMA:37526") AnnotationAssertion(Annotation( "FMA:37526") "basal epiphysis of middle phalanx of fourth finger") AnnotationAssertion(Annotation( "FMA:37526") "basal epiphysis of middle phalanx of ring finger") AnnotationAssertion(Annotation( "FMA:37526") "base of middle phalanx of fourth digit of hand") AnnotationAssertion(Annotation( "FMA:37526") "base of middle phalanx of fourth finger") AnnotationAssertion(Annotation( "FMA:37526") "base of middle phalanx of ring finger") AnnotationAssertion(Annotation( ) Annotation( ) "proximal epiphysis of middle phalanx of manual digit IV") AnnotationAssertion(Annotation( "FMA:37526") Annotation( "NCBITaxon:9606"^^xsd:string) Annotation( ) "proximal epiphysis of middle phalanx of ring finger") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004438") AnnotationAssertion(rdfs:label "proximal epiphysis of middle phalanx of manual digit 4") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (proximal epiphysis of middle phalanx of manual digit 5) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A proximal epiphysis that is part of a middle phalanx of manual digit 5 [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( "FMA:37538") AnnotationAssertion(Annotation( "FMA:37538") "basal epiphysis of middle phalanx of fifth finger") AnnotationAssertion(Annotation( "FMA:37538") "basal epiphysis of middle phalanx of little finger") AnnotationAssertion(Annotation( "FMA:37538") "base of middle phalanx of fifth digit of hand") AnnotationAssertion(Annotation( "FMA:37538") "base of middle phalanx of fifth finger") AnnotationAssertion(Annotation( "FMA:37538") "base of middle phalanx of little finger") AnnotationAssertion(Annotation( ) Annotation( ) "proximal epiphysis of middle phalanx of manual digit V") AnnotationAssertion(Annotation( "FMA:37538") Annotation( "NCBITaxon:9606"^^xsd:string) Annotation( ) "proximal epiphysis of middle phalanx of little finger") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004439") AnnotationAssertion(rdfs:label "proximal epiphysis of middle phalanx of manual digit 5") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (proximal epiphysis of proximal phalanx of manual digit 2) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A proximal epiphysis that is part of a proximal phalanx of manual digit 2 [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( "FMA:37499") AnnotationAssertion(Annotation( "FMA:37499") "base of proximal phalanx of index finger") AnnotationAssertion(Annotation( "FMA:37499") "base of proximal phalanx of second digit of hand") AnnotationAssertion(Annotation( "FMA:37499") "base of proximal phalanx of second finger") AnnotationAssertion(Annotation( ) Annotation( ) "proximal epiphysis of proximal phalanx of manual digit II") AnnotationAssertion(Annotation( "FMA:37499") Annotation( "NCBITaxon:9606"^^xsd:string) Annotation( ) "proximal epiphysis of proximal phalanx of index finger") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004440") AnnotationAssertion(rdfs:label "proximal epiphysis of proximal phalanx of manual digit 2") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (proximal epiphysis of proximal phalanx of manual digit 3) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A proximal epiphysis that is part of a proximal phalanx of manual digit 3 [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( "FMA:37511") AnnotationAssertion(Annotation( "FMA:37511") "basal epiphysis of proximal phalanx of middle finger") AnnotationAssertion(Annotation( "FMA:37511") "base of proximal phalanx of middle finger") AnnotationAssertion(Annotation( "FMA:37511") "base of proximal phalanx of third digit of hand") AnnotationAssertion(Annotation( "FMA:37511") "base of proximal phalanx of third finger") AnnotationAssertion(Annotation( ) Annotation( ) "proximal epiphysis of proximal phalanx of manual digit III") AnnotationAssertion(Annotation( "FMA:37511") Annotation( "NCBITaxon:9606"^^xsd:string) Annotation( ) "proximal epiphysis of proximal phalanx of middle finger") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004441") AnnotationAssertion(rdfs:label "proximal epiphysis of proximal phalanx of manual digit 3") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (proximal epiphysis of proximal phalanx of manual digit 4) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A proximal epiphysis that is part of a proximal phalanx of manual digit 4 [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( "FMA:37523") AnnotationAssertion(Annotation( "FMA:37523") "basal epiphysis of proximal phalanx of fourth finger") AnnotationAssertion(Annotation( "FMA:37523") "basal epiphysis of proximal phalanx of ring finger") AnnotationAssertion(Annotation( "FMA:37523") "base of proximal phalanx of fourth digit of hand") AnnotationAssertion(Annotation( "FMA:37523") "base of proximal phalanx of fourth finger") AnnotationAssertion(Annotation( "FMA:37523") "base of proximal phalanx of ring finger") AnnotationAssertion(Annotation( ) Annotation( ) "proximal epiphysis of proximal phalanx of manual digit IV") AnnotationAssertion(Annotation( "FMA:37523") Annotation( "NCBITaxon:9606"^^xsd:string) Annotation( ) "proximal epiphysis of proximal phalanx of ring finger") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004442") AnnotationAssertion(rdfs:label "proximal epiphysis of proximal phalanx of manual digit 4") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (proximal epiphysis of proximal phalanx of manual digit 5) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A proximal epiphysis that is part of a proximal phalanx of manual digit 5 [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( "FMA:37535") AnnotationAssertion(Annotation( "FMA:37535") "basal epiphysis of proximal phalanx of little finger") AnnotationAssertion(Annotation( "FMA:37535") "base of proximal phalanx of fifth digit of hand") AnnotationAssertion(Annotation( "FMA:37535") "base of proximal phalanx of fifth finger") AnnotationAssertion(Annotation( "FMA:37535") "base of proximal phalanx of little finger") AnnotationAssertion(Annotation( ) Annotation( ) "proximal epiphysis of proximal phalanx of manual digit V") AnnotationAssertion(Annotation( "FMA:37535") Annotation( "NCBITaxon:9606"^^xsd:string) Annotation( ) "proximal epiphysis of proximal phalanx of little finger") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004443") AnnotationAssertion(rdfs:label "proximal epiphysis of proximal phalanx of manual digit 5") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (proximal epiphysis of distal phalanx of manual digit 1) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A proximal epiphysis that is part of a distal phalanx of manual digit 1 [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( "FMA:37493") AnnotationAssertion(Annotation( "FMA:37493") "base of distal phalanx of thumb") AnnotationAssertion(Annotation( ) Annotation( ) "proximal epiphysis of distal phalanx of manual digit I") AnnotationAssertion(Annotation( "FMA:37493") Annotation( "NCBITaxon:9606"^^xsd:string) Annotation( ) "proximal epiphysis of distal phalanx of thumb") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004444") AnnotationAssertion(rdfs:label "proximal epiphysis of distal phalanx of manual digit 1") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (proximal epiphysis of proximal phalanx of manual digit 1) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A proximal epiphysis that is part of a proximal phalanx of manual digit 1 [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( "FMA:37490") AnnotationAssertion(Annotation( "FMA:37490") "basal epiphysis of proximal phalanx of thumb") AnnotationAssertion(Annotation( "FMA:37490") "base of proximal phalanx of thumb") AnnotationAssertion(Annotation( ) Annotation( ) "proximal epiphysis of proximal phalanx of manual digit I") AnnotationAssertion(Annotation( "FMA:37490") Annotation( "NCBITaxon:9606"^^xsd:string) Annotation( ) "proximal epiphysis of proximal phalanx of thumb") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004445") AnnotationAssertion(rdfs:label "proximal epiphysis of proximal phalanx of manual digit 1") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (epiphysis of phalanx) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An epiphysis that is part of a phalanx [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004446") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "epiphysis of phalanx") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (proximal epiphysis of phalanx) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A proximal epiphysis that is part of a phalanx [Automatically generated definition].") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004447") AnnotationAssertion(rdfs:label "proximal epiphysis of phalanx") SubClassOf( ) SubClassOf( ) # Class: (distal epiphysis of phalanx) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A distal epiphysis that is part of a phalanx [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( "head of phalanx") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004448") AnnotationAssertion(rdfs:label "distal epiphysis of phalanx") SubClassOf( ) SubClassOf( ) # Class: (cerebral artery) AnnotationAssertion(Annotation( ) "One of three main pairs of arteries and their branches, which irrigate the cerebrum of the brain.") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0010493") Annotation( "AAO"^^xsd:string) Annotation( "AAO:BJB"^^xsd:string) "Part of the internal carotid containing many branches supplying blood to the chorioid plexuses of the brain.[AAO]") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0010493") Annotation( "AAO"^^xsd:string) "relationship loss: part_of internal carotid (AAO:0010219)[AAO]") AnnotationAssertion(Annotation( "AAO"^^xsd:string) "in AAO this is part_of the internal carotid, but in humans the PCA intervenes for some cerebral arteries. Proper comparative review required") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010493") AnnotationAssertion( "BTO:0005205") AnnotationAssertion( "CALOHA:TS-0126") AnnotationAssertion( "EHDAA2:0000233") AnnotationAssertion( "EHDAA:5294") AnnotationAssertion( "EMAPA:18613") AnnotationAssertion( "GAID:484") AnnotationAssertion( "MA:0002562") AnnotationAssertion( "MESH:D002536") AnnotationAssertion( "NCIT:C12691") AnnotationAssertion(Annotation( "ncithesaurus:Cerebral_Artery") "UMLS:C0007770") AnnotationAssertion( "XAO:0000367") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004449") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "cerebral artery") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (gastric vein) AnnotationAssertion(Annotation( "UBERON:cjm"^^xsd:string) Annotation( "ncithesaurus:Gastric_Vein") "A laterally paired vein that drains blood away from the lesser curvature of the stomach.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0011046") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37146") AnnotationAssertion( "MA:0002128") AnnotationAssertion( "NCIT:C32665") AnnotationAssertion(Annotation( "ncithesaurus:Gastric_Vein") "UMLS:C0750610") AnnotationAssertion( "XAO:0000389") AnnotationAssertion(Annotation( ) Annotation( ) "vena gastrica") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004450") AnnotationAssertion(rdfs:label "gastric vein") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (trunk or cervical vertebra) AnnotationAssertion(Annotation( "UBERONREF:0000006") "A vertebra in the trunk or cervical region. Includes all cervical, thoracic and lumbar vertebrae, but excludes caudal vertebra.") AnnotationAssertion( "In humans, there are 24 presacral vertebrae (7 cervical, 12 thoracic, and 5 lumbar)") AnnotationAssertion(Annotation( "XAO"^^xsd:string) "it's not clear if the XAO class belongs here or below") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37722") AnnotationAssertion( "MA:0002869") AnnotationAssertion( "XAO:0003077") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "MA:0002869") "presacral vertebra") AnnotationAssertion( "UBERON:0004451") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "trunk or cervical vertebra") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (carpal region) AnnotationAssertion(Annotation( ) Annotation( ) "A mesopodium that is part of a manus. Includes as parts the carpal skeleton and associated tissues[cjm]. The anatomical region surrounding the carpus including the distal parts of the bones of the forearm and the proximal parts of the metacarpus or five metacarpal bones and the series of joints between these bones, thus referred to as wrist joints. This region also includes the carpal tunnel, the anatomical snuff box, the flexor retinaculum, and the extensor retinaculum[WP,unvetted].") AnnotationAssertion( "UBERON:0001462") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0000218") AnnotationAssertion( "EHDAA:5196") AnnotationAssertion( "EMAPA:19122") AnnotationAssertion( "EMAPA:32784") AnnotationAssertion( "FMA:24922") AnnotationAssertion( "GAID:59") AnnotationAssertion( "MA:0000039") AnnotationAssertion( "MESH:D014953") AnnotationAssertion( "NCIT:C111033") AnnotationAssertion( "OpenCyc:Mx4rvVjncpwpEbGdrcN5Y29ycA") AnnotationAssertion( "galen:Wrist") AnnotationAssertion( "carpal limb segment") AnnotationAssertion( "carpal segment") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "fore basipodium") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "fore mesopodium") AnnotationAssertion( "hand mesopodium") AnnotationAssertion( "manus mesopodium") AnnotationAssertion(Annotation( "FMA:24922") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "regio carpalis") AnnotationAssertion(Annotation( "MA:0000039") "wrist") AnnotationAssertion( "wrist region") AnnotationAssertion(Annotation( "EMAPA:19122") "carpus of fore-paw") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "articulatio radiocarpea") AnnotationAssertion(Annotation( ) "carpus") AnnotationAssertion( "UBERON:0004452") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "carpal region") AnnotationAssertion( "Hand:parts.jpg"^^xsd:anyURI) AnnotationAssertion( "Human:wrist.png"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (metacarpus region) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A metapodium region that is part of a manus.") AnnotationAssertion( "Note that along with FMA we treat this as a limb segment rather than a purely skeletal element") AnnotationAssertion( "metacarpal") AnnotationAssertion( "Note that mammalian and non-mammalian AOs differ in whether they consider this a part of the skeleton") AnnotationAssertion( ) AnnotationAssertion( "CALOHA:TS-2218") AnnotationAssertion( "EMAPA:32654") AnnotationAssertion( "FMA:24925") AnnotationAssertion( "MA:0000042") AnnotationAssertion(Annotation( "FMA:24925") "distal segment of hand proper") AnnotationAssertion(Annotation( "FMA:24925") "metacarpal part of hand") AnnotationAssertion( "metacarpal part of manus") AnnotationAssertion(Annotation( "FMA:24925") "metacarpal region") AnnotationAssertion(Annotation( "MA:0000042") "metacarpus") AnnotationAssertion(Annotation( ) Annotation( "NCBITaxon:9788"^^xsd:string) "forelimb cannon region") AnnotationAssertion(Annotation( ) Annotation( "NCBITaxon:9788"^^xsd:string) "forelimb equine cannon region") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004453") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "metacarpus region") AnnotationAssertion( "Metacarpals:numbered-en.svg"^^xsd:anyURI) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ) SubClassOf(Annotation( "PHENOSCAPE:ni"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (tarsal region) AnnotationAssertion(Annotation( ) Annotation( ) "Mesopodial segment of the pes, including the tarsal skeleton and associated tissues.") AnnotationAssertion( "this term refers to the limb segment. See also: tarsal bones and tarsal skeleton") AnnotationAssertion(Annotation( "MA"^^xsd:string) "MA has both tarsus (part of foot, has tarsal bone) and ankle (part of hindlimb, has joint, nerve, skin).") AnnotationAssertion( "UBERON:0002388") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "CALOHA:TS-2219") AnnotationAssertion( "EFO:0001409") AnnotationAssertion( "EMAPA:32783") AnnotationAssertion( "FMA:9665") AnnotationAssertion( "GAID:41") AnnotationAssertion( "MA:0000043") AnnotationAssertion( "MESH:A01.378.610.250.149") AnnotationAssertion( "MESH:A13.473.821") AnnotationAssertion( "OpenCyc:Mx4rvVi-R5wpEbGdrcN5Y29ycA") AnnotationAssertion( "galen:Ankle") AnnotationAssertion(Annotation( "MA:0000043") "ankle") AnnotationAssertion( "ankle region") AnnotationAssertion( "tarsal limb segment") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "articulatio talocruralis") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "hind basipodium") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "hind mesopodium") AnnotationAssertion(Annotation( ) Annotation( ) "hock") AnnotationAssertion( "UBERON:0004454") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "tarsal region") AnnotationAssertion( "Ankle:en.svg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses( ) # Class: (neurula embryo) AnnotationAssertion(Annotation( ) "An embryo at the neurula stage.") AnnotationAssertion( "UBERON:0007013") AnnotationAssertion( ) AnnotationAssertion( "BILA:0000061") AnnotationAssertion( "BTO:0001766") AnnotationAssertion( "NCIT:C34229") AnnotationAssertion(Annotation( "ncithesaurus:Neurula") "UMLS:C1518306") AnnotationAssertion(Annotation( "BTO:0001766") "neurula") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004455") AnnotationAssertion(rdfs:label "neurula embryo") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (entire sense organ system) AnnotationAssertion(Annotation( ) "Sum of all sensory systems in an organism.") AnnotationAssertion( "note the distinct between entire sensory system and individual system. this reconciles is_a and part_of distinctions between ssAOs") AnnotationAssertion( "FMA:78499") AnnotationAssertion(Annotation( "FMA:78499") "sense organ system") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004456") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "entire sense organ system") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete cavity lining) AnnotationAssertion( "UBERON:0000042") AnnotationAssertion(Annotation( "MA"^^xsd:string) "This class was originally created to mirror the MA class of the same name; in MA this groups pericardium, pleura and periotoneal cavity lining and is better represented using concepts like serous membrane") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004457") AnnotationAssertion(rdfs:label "obsolete cavity lining") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete body cavity or lining) AnnotationAssertion(Annotation( ) "Either a cavity lining or the space it encloses.") AnnotationAssertion( "UBERON:0005906") AnnotationAssertion( ) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004458") AnnotationAssertion(rdfs:label "obsolete body cavity or lining") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (skeletal musculature of head) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "Any collection of skeletal muscles that is part of a head [Automatically generated definition].") AnnotationAssertion( "EMAPA:18171") AnnotationAssertion( "FMA:71287") AnnotationAssertion(Annotation( "FMA:71287") "head musculature") AnnotationAssertion(Annotation( "FMA:71287") "muscle group of head") AnnotationAssertion(Annotation( "FMA:71287") "muscles of head") AnnotationAssertion(Annotation( "FMA:71287") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "musculi capitis") AnnotationAssertion(Annotation( "FMA:71287") "set of muscles of head") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004461") AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "This class is restricted to skeletal muscles that attach to the cranial skeleton. This seems to be consistent with FMA and EMAPA usage. Note that by definition this excludes invertebrate head musculature. It corresponds to the individual muscle organ term UBERON:0002376") AnnotationAssertion(rdfs:label "skeletal musculature of head") AnnotationAssertion(rdfs:seeAlso "https://github.com/obophenotype/mouse-anatomy-ontology/issues/4"^^xsd:anyURI) AnnotationAssertion(rdfs:seeAlso "https://github.com/obophenotype/uberon/issues/1405"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (musculature of body wall) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "Any collection of muscles that is part of a body wall [Automatically generated definition].") AnnotationAssertion( "define generically to encompass both vertebrates and invertebrates") AnnotationAssertion( "BSA:0000058") AnnotationAssertion( "BTO:0001863") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37853") AnnotationAssertion( "FMA:86931") AnnotationAssertion( "WBbt:0005813") AnnotationAssertion(Annotation( "FMA:86931") "body wall musculature") AnnotationAssertion( "uberon") AnnotationAssertion( "body wall muscles") AnnotationAssertion( "UBERON:0004462") AnnotationAssertion(rdfs:label "musculature of body wall") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (musculature of hindlimb stylopod) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "Any collection of muscles that is part of a hindlimb stylopod (upper leg / thigh)[Automatically generated definition].") AnnotationAssertion( "FMA:50208") AnnotationAssertion(Annotation( "FMA:50208") "muscle group of thigh") AnnotationAssertion(Annotation( "FMA:50208") "musculature of thigh") AnnotationAssertion(Annotation( "FMA:50208") "set of muscles of thigh") AnnotationAssertion(Annotation( "FMA:50208") "thigh musculature") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004463") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "musculature of hindlimb stylopod") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (musculature of thorax) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "Any collection of muscles that is part of a thorax [Automatically generated definition].") AnnotationAssertion(Annotation( "BTO"^^xsd:string) "BTO and FMA do not mean precisely the same thing here. BTO thorax muscle is a pectoral muscle or diaphragm") AnnotationAssertion( "BTO:0000508") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37260") AnnotationAssertion( "FMA:71293") AnnotationAssertion(Annotation( "FMA:71293") "muscle group of thorax") AnnotationAssertion(Annotation( "FMA:71293") "muscles of thorax") AnnotationAssertion(Annotation( "FMA:71293") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "musculi thoracis") AnnotationAssertion(Annotation( "FMA:71293") "set of muscles of thorax") AnnotationAssertion(Annotation( "FMA:71293") "thoracic musculature") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004464") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "musculature of thorax") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (musculature of neck) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "Any collection of muscles that is part of a neck [Automatically generated definition].") AnnotationAssertion( "AAO:0000091") AnnotationAssertion( "EMAPA:36050") AnnotationAssertion( "FMA:71290") AnnotationAssertion( "MESH:D009334") AnnotationAssertion(Annotation( "AAO:0000091") "cervical muscles") AnnotationAssertion(Annotation( "FMA:71290") "muscle group of neck") AnnotationAssertion(Annotation( "FMA:71290") "muscles of neck") AnnotationAssertion(Annotation( "FMA:71290") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "musculi cervicis") AnnotationAssertion(Annotation( "FMA:71290") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "musculi colli") AnnotationAssertion(Annotation( "FMA:71290") "neck musculature") AnnotationAssertion(Annotation( "FMA:71290") "set of muscles of neck") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004465") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "musculature of neck") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (musculature of leg) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "Any collection of muscles that is part of a lower leg or upper leg [Automatically generated definition].") AnnotationAssertion( "see notes on UBERON:0000978 for possible confusion over the term 'leg'. This class represents the class-union of upper leg musculature and lower leg musculature (and thus may not mean precisely the same thing as the EHDAA2 class)") AnnotationAssertion( "UBERON:0005632") AnnotationAssertion( "EHDAA2:0000973") AnnotationAssertion(Annotation( "EHDAA2:0000973") "leg muscle system") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004466") AnnotationAssertion(rdfs:label "musculature of leg") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (musculature of pharynx) AnnotationAssertion(Annotation( ) "The collection of muscles that acts on the pharynx.") AnnotationAssertion( "FMA:264609") AnnotationAssertion( "TAO:0001307") AnnotationAssertion( "ZFA:0001307") AnnotationAssertion(Annotation( "TAO:0001307") "pharyngeal musculature") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:264609") "set of muscles of pharynx") AnnotationAssertion( "UBERON:0004467") AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "See comments for 'pharyngeal muscle'") AnnotationAssertion(rdfs:label "musculature of pharynx") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) # Class: (set of muscles of vertebral column) AnnotationAssertion( "FMA:33061") AnnotationAssertion(Annotation( "FMA:33061") "muscle group of vertebral column") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004468") AnnotationAssertion(rdfs:label "set of muscles of vertebral column") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (musculature of back) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "Any collection of muscles that is part of a back [Automatically generated definition].") AnnotationAssertion( "FMA:71291") AnnotationAssertion(Annotation( "FMA:71291") "muscle group of back") AnnotationAssertion(Annotation( "FMA:71291") "muscles of back") AnnotationAssertion(Annotation( "FMA:71291") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "musculi dorsi") AnnotationAssertion(Annotation( "FMA:71291") "set of muscles of back") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004469") AnnotationAssertion(rdfs:label "musculature of back") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (musculature of pelvic girdle) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "Any collection of muscles that is part of a pelvic girdle [Automatically generated definition].") AnnotationAssertion(Annotation( "FMA"^^xsd:string) "we merge two FMA classes here") AnnotationAssertion( "UBERON:0004485") AnnotationAssertion( "UBERON:0005633") AnnotationAssertion( "AAO:0000427") AnnotationAssertion( "EHDAA2:0001429") AnnotationAssertion( "EMAPA:18184") AnnotationAssertion( "FMA:50205") AnnotationAssertion( "FMA:50248") AnnotationAssertion(Annotation( "FMA:50205") "muscle group of pelvic girdle") AnnotationAssertion(Annotation( "FMA:50248") "muscle group of pelvis") AnnotationAssertion(Annotation( "EHDAA2:0001429") "pelvic girdle muscle system") AnnotationAssertion(Annotation( "AAO:0000427") "pelvic girdle muscles") AnnotationAssertion(Annotation( "FMA:50205") "pelvic girdle musculature") AnnotationAssertion(Annotation( "FMA:50205") "set of muscles of pelvic girdle") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:50248") "muscular system of pelvis") AnnotationAssertion(Annotation( "FMA:50248") "set of muscles of pelvis") AnnotationAssertion( "UBERON:0004470") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "musculature of pelvic girdle") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (musculature of pectoral girdle) AnnotationAssertion(Annotation( ) "A subdivision of the musculature of the body in the pectoral girdle region. Includes pectoral and shoulder muscles.") AnnotationAssertion( "AAO:0000423") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37857") AnnotationAssertion( "FMA:33519") AnnotationAssertion(Annotation( "FMA:33519") "muscle group of pectoral girdle") AnnotationAssertion(Annotation( "AAO:0000423") "pectoral girdle muscles") AnnotationAssertion(Annotation( "FMA:33519") "pectoral girdle musculature") AnnotationAssertion(Annotation( "FMA:33519") "set of muscles of pectoral girdle") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004471") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "musculature of pectoral girdle") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete musculature of thorax) AnnotationAssertion( "FMA:74779") AnnotationAssertion( "UBERON:0004464") AnnotationAssertion(Annotation( "FMA:74779") "musculature of chest") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:74779") "chest musculature") AnnotationAssertion(Annotation( "FMA:74779") "set of muscles of chest") AnnotationAssertion( "UBERON:0004472") AnnotationAssertion(rdfs:label "obsolete musculature of thorax") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (musculature of face) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "Any collection of muscles that is part of a face.") AnnotationAssertion( "originally created to reflect the distinction drawn in FMA between a facial muscle and the entire musculature of the face. However, naming both does not serve any particular purpose") AnnotationAssertion( "FMA:71288") AnnotationAssertion(Annotation( ) "entire facial musculature") AnnotationAssertion(Annotation( "FMA:71288") "facial muscles") AnnotationAssertion(Annotation( "FMA:71288") "muscle group of face") AnnotationAssertion(Annotation( "FMA:71288") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "musculi faciei") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:71288") "set of facial muscles") AnnotationAssertion(Annotation( "FMA:71288") "set of muscles of face") AnnotationAssertion( "UBERON:0004473") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "musculature of face") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (musculature of arm) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "Any collection of muscles that is part of an arm [Automatically generated definition].") AnnotationAssertion( "EHDAA2:0000141") AnnotationAssertion(Annotation( "EHDAA2:0000141") "arm muscle system") AnnotationAssertion(Annotation( "FMA:50202") "arm musculature") AnnotationAssertion(Annotation( "FMA:50202") "muscle group of arm") AnnotationAssertion(Annotation( "FMA:50202") "set of muscles of arm") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004474") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "musculature of arm") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (musculature of hip) AnnotationAssertion(Annotation( ) "The collection of muscles that form attachments to the hip skeleton.") AnnotationAssertion( "FMA:50227") AnnotationAssertion(Annotation( "FMA:50227") "hip musculature") AnnotationAssertion(Annotation( "FMA:50227") "muscle group of hip") AnnotationAssertion(Annotation( "FMA:50227") "set of muscles of hip") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004475") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "musculature of hip") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) SubClassOf( ObjectSomeValuesFrom( )) # Class: (musculature of shoulder) AnnotationAssertion(Annotation( ) "The collection of muscles that form attachments to the shoulder skeleton.") AnnotationAssertion( "FMA:50220") AnnotationAssertion(Annotation( "FMA:50220") "muscle group of shoulder") AnnotationAssertion(Annotation( "FMA:50220") "set of muscles of shoulder") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004476") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "musculature of shoulder") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete tongue musculature) AnnotationAssertion( "FMA:71289") AnnotationAssertion(Annotation( "FMA:71289") "muscle group of tongue") AnnotationAssertion(Annotation( "FMA:71289") "muscles of tongue") AnnotationAssertion(Annotation( "FMA:71289") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "musculi linguae") AnnotationAssertion(Annotation( "FMA:71289") "set of muscles of tongue") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004477") AnnotationAssertion(rdfs:label "obsolete tongue musculature") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (musculature of larynx) AnnotationAssertion(Annotation( ) "The collection of muscles that are part of the larynx.") AnnotationAssertion( "currently defined by location rather than attachment") AnnotationAssertion( ) AnnotationAssertion( "FMA:264611") AnnotationAssertion( "FMA:46616") AnnotationAssertion( "MESH:D007821") AnnotationAssertion(Annotation( "FMA:46616") "laryngeal muscles") AnnotationAssertion(Annotation( "FMA:46616") "laryngeal muscles set") AnnotationAssertion(Annotation( "FMA:46616") "muscle group of larynx") AnnotationAssertion(Annotation( "FMA:46616") "set of laryngeal muscles") AnnotationAssertion(Annotation( "FMA:264611") "set of muscles of larynx") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004478") AnnotationAssertion(rdfs:label "musculature of larynx") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (musculature of trunk) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "Any collection of muscles that is part of a trunk [Automatically generated definition].") AnnotationAssertion( "currently defined by location rather than attachment") AnnotationAssertion( "AAO:0011572") AnnotationAssertion( "EFO:0003531") AnnotationAssertion( "FMA:50187") AnnotationAssertion(Annotation( "FMA:50187") "muscle group of trunk") AnnotationAssertion(Annotation( "FMA:50187") "set of muscles of trunk") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:50187") "muscular system of trunk") AnnotationAssertion( "UBERON:0004479") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "musculature of trunk") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (musculature of limb) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "Any collection of muscles that is part of a limb [Automatically generated definition].") AnnotationAssertion( "currently defined by location rather than attachment") AnnotationAssertion( "UBERON:0005635") AnnotationAssertion( "EHDAA2:0000995") AnnotationAssertion( "EMAPA:32700") AnnotationAssertion( "FMA:50188") AnnotationAssertion(Annotation( "EHDAA2:0000995") "limb muscle system") AnnotationAssertion(Annotation( "FMA:50188") "limb musculature") AnnotationAssertion(Annotation( "FMA:50188") "muscle group of limb") AnnotationAssertion(Annotation( "FMA:50188") "set of muscles of limb") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004480") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "musculature of limb") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (musculature of upper limb) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "Any collection of muscles that is part of a forelimb [Automatically generated definition].") AnnotationAssertion( "currently defined by location rather than attachment") AnnotationAssertion( "FMA:50396") AnnotationAssertion(Annotation( "FMA:50396") "free upper limb musculature") AnnotationAssertion(Annotation( "FMA:50396") "muscle group of free upper limb") AnnotationAssertion(Annotation( "FMA:50396") "musculature of free upper limb") AnnotationAssertion(Annotation( "FMA:50396") "set of muscles of free upper limb") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004481") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "musculature of upper limb") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (musculature of lower limb) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "Any collection of muscles that is part of a hindlimb [Automatically generated definition].") AnnotationAssertion( "currently defined by location rather than attachment") AnnotationAssertion( "FMA:50399") AnnotationAssertion(Annotation( "FMA:50399") "free lower limb musculature") AnnotationAssertion(Annotation( "FMA:50399") "muscle group of free lower limb") AnnotationAssertion(Annotation( "FMA:50399") "musculature of free lower limb") AnnotationAssertion(Annotation( "FMA:50399") "set of muscles of free lower limb") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004482") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "musculature of lower limb") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete iliocostalis musculature) AnnotationAssertion( "FMA:33062") AnnotationAssertion(Annotation( "FMA:33062") "iliocostalis muscle group") AnnotationAssertion(Annotation( "FMA:33062") "iliocostalis muscles set") AnnotationAssertion(Annotation( "FMA:33062") "set of iliocostalis muscles") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004483") AnnotationAssertion(rdfs:label "obsolete iliocostalis musculature") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete splenius musculature) AnnotationAssertion( "FMA:22596") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004484") AnnotationAssertion(rdfs:label "obsolete splenius musculature") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (musculature of perineum) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "Any collection of muscles that is part of a perineum [Automatically generated definition].") AnnotationAssertion( "currently defined by location rather than attachment") AnnotationAssertion( "EMAPA:36629") AnnotationAssertion( "FMA:71295") AnnotationAssertion(Annotation( "FMA:71295") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "musculi perinei") AnnotationAssertion(Annotation( "FMA:71295") "perineal muscles") AnnotationAssertion(Annotation( "FMA:71295") "perineal muscles set") AnnotationAssertion(Annotation( "FMA:71295") "set of perineal muscles") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004486") AnnotationAssertion(rdfs:label "musculature of perineum") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (musculature of forelimb zeugopod) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "Any collection of muscles that is part of a lower arm [Automatically generated definition].") AnnotationAssertion( "FMA:39089") AnnotationAssertion(Annotation( "FMA:39089") "muscle group of forearm") AnnotationAssertion(Annotation( "FMA:39089") "musculature of forearm") AnnotationAssertion(Annotation( "FMA:39089") "set of muscles of forearm") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004487") AnnotationAssertion(rdfs:label "musculature of forelimb zeugopod") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (musculature of pes) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "Any collection of muscles that is part of a foot [Automatically generated definition].") AnnotationAssertion( "currently defined by location rather than attachment") AnnotationAssertion( "FMA:50214") AnnotationAssertion(Annotation( "FMA:50214") "foot musculature") AnnotationAssertion(Annotation( "FMA:50214") "muscle group of foot") AnnotationAssertion(Annotation( "FMA:50214") "musculature of foot") AnnotationAssertion(Annotation( "FMA:50214") "set of muscles of foot") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004488") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "musculature of pes") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (musculature of manus) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "Any collection of muscles that is part of a manus [Automatically generated definition].") AnnotationAssertion( "currently defined by location rather than attachment") AnnotationAssertion( "FMA:42368") AnnotationAssertion(Annotation( "FMA:42368") "hand musculature") AnnotationAssertion(Annotation( "FMA:42368") "muscle group of hand") AnnotationAssertion(Annotation( "FMA:42368") "musculature of hand") AnnotationAssertion(Annotation( "FMA:42368") "set of muscles of hand") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004489") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "musculature of manus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (cardiac muscle tissue of atrium) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A portion of cardiac muscle tissue that is part of an atrium [Automatically generated definition].") AnnotationAssertion(Annotation( "GO") "in GO, this is equivalent to the atrial myocardium, but FMA distinguishes these two. Consider merging.") AnnotationAssertion( "FMA:7283") AnnotationAssertion(Annotation( "GO:0055009") "atrial cardiac muscle tissue") AnnotationAssertion(Annotation( "GO:0055009") "atrial heart muscle") AnnotationAssertion(Annotation( "GO:0055009") "cardiac atrium muscle") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "GO:0055009") Annotation( "GOC:mtg_heart") "atrial myocardium") AnnotationAssertion( "UBERON:0004490") AnnotationAssertion(rdfs:label "cardiac muscle tissue of atrium") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (cardiac muscle tissue of interatrial septum) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A portion of cardiac muscle tissue that is part of a interatrial septum [Automatically generated definition].") AnnotationAssertion( "FMA:84083") AnnotationAssertion(Annotation( ) "interatrial septum cardiac muscle tissue") AnnotationAssertion(Annotation( ) "interatrial septum heart muscle") AnnotationAssertion(Annotation( ) "interatrial septum muscle") AnnotationAssertion(Annotation( ) "interatrial septum myocardium") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004491") AnnotationAssertion(rdfs:label "cardiac muscle tissue of interatrial septum") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (cardiac muscle tissue of cardiac septum) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A portion of cardiac muscle tissue that is part of a cardiac septum [Automatically generated definition].") AnnotationAssertion( "FMA:226279") AnnotationAssertion(Annotation( ) "cardiac septum cardiac muscle tissue") AnnotationAssertion(Annotation( ) "cardiac septum heart muscle") AnnotationAssertion(Annotation( ) "cardiac septum muscle") AnnotationAssertion(Annotation( ) "cardiac septum myocardium") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004492") AnnotationAssertion(rdfs:label "cardiac muscle tissue of cardiac septum") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (cardiac muscle tissue of myocardium) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A portion of cardiac muscle tissue that is part of a myocardium [Automatically generated definition].") AnnotationAssertion( "Note placement of MA class based on parthood relationship") AnnotationAssertion( "EMAPA:32688") AnnotationAssertion( "FMA:261726") AnnotationAssertion( "MA:0002441") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004493") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "cardiac muscle tissue of myocardium") SubClassOf( ) SubClassOf(Annotation( "MA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (cardiac muscle tissue of papillary muscle) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A portion of cardiac muscle tissue that is part of a papillary muscle [Automatically generated definition].") AnnotationAssertion( "FMA:84425") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004494") AnnotationAssertion(rdfs:label "cardiac muscle tissue of papillary muscle") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (skeletal muscle tissue of diaphragm) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A portion of skeletal muscle tissue that is part of a diaphragm [Automatically generated definition].") AnnotationAssertion( "FMA:261898") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004495") AnnotationAssertion(rdfs:label "skeletal muscle tissue of diaphragm") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (skeletal muscle tissue of iliacus) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A portion of skeletal muscle tissue that is part of a iliacus [Automatically generated definition].") AnnotationAssertion( "FMA:261992") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004496") AnnotationAssertion(rdfs:label "skeletal muscle tissue of iliacus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (skeletal muscle tissue of gluteus maximus) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A portion of skeletal muscle tissue that is part of a gluteus maximus [Automatically generated definition].") AnnotationAssertion( "FMA:261980") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004497") AnnotationAssertion(rdfs:label "skeletal muscle tissue of gluteus maximus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (skeletal muscle tissue of quadriceps femoris) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A portion of skeletal muscle tissue that is part of a quadriceps femoris [Automatically generated definition].") AnnotationAssertion( "FMA:261998") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004498") AnnotationAssertion(rdfs:label "skeletal muscle tissue of quadriceps femoris") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (skeletal muscle tissue of tibialis anterior) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A portion of skeletal muscle tissue that is part of a tibialis anterior [Automatically generated definition].") AnnotationAssertion( "FMA:262004") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004499") AnnotationAssertion(rdfs:label "skeletal muscle tissue of tibialis anterior") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (skeletal muscle tissue of deltoid) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A portion of skeletal muscle tissue that is part of a deltoid [Automatically generated definition].") AnnotationAssertion( "FMA:261732") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:261732") "skeletal muscle tissue of deltoid muscle") AnnotationAssertion( "UBERON:0004500") AnnotationAssertion(rdfs:label "skeletal muscle tissue of deltoid") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (skeletal muscle tissue of teres major) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A portion of skeletal muscle tissue that is part of a teres major [Automatically generated definition].") AnnotationAssertion( "FMA:261962") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:261962") "skeletal muscle tissue of teres major muscle") AnnotationAssertion( "UBERON:0004501") AnnotationAssertion(rdfs:label "skeletal muscle tissue of teres major") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (skeletal muscle tissue of biceps brachii) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A portion of skeletal muscle tissue that is part of a biceps brachii [Automatically generated definition].") AnnotationAssertion( "FMA:261974") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:261974") "skeletal muscle tissue of biceps brachii muscle") AnnotationAssertion( "UBERON:0004502") AnnotationAssertion(rdfs:label "skeletal muscle tissue of biceps brachii") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (skeletal muscle tissue of digastric) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A portion of skeletal muscle tissue that is part of a digastric [Automatically generated definition].") AnnotationAssertion( "FMA:261872") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004503") AnnotationAssertion(rdfs:label "skeletal muscle tissue of digastric") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (skeletal muscle tissue of mylohyoid) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A portion of skeletal muscle tissue that is part of a mylohyoid [Automatically generated definition].") AnnotationAssertion( "FMA:261878") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004504") AnnotationAssertion(rdfs:label "skeletal muscle tissue of mylohyoid") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (skeletal muscle tissue of orbicularis oculi) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A portion of skeletal muscle tissue that is part of a orbicularis oculi [Automatically generated definition].") AnnotationAssertion( "FMA:261812") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004505") AnnotationAssertion(rdfs:label "skeletal muscle tissue of orbicularis oculi") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (skeletal muscle tissue of masseter) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A portion of skeletal muscle tissue that is part of a masseter [Automatically generated definition].") AnnotationAssertion( "FMA:261824") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004506") AnnotationAssertion(rdfs:label "skeletal muscle tissue of masseter") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (skeletal muscle tissue of temporalis) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A portion of skeletal muscle tissue that is part of a temporalis [Automatically generated definition].") AnnotationAssertion( "FMA:261740") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004507") AnnotationAssertion(rdfs:label "skeletal muscle tissue of temporalis") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (skeletal muscle tissue of levator palpebrae superioris) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A portion of skeletal muscle tissue that is part of a levator palpebrae superioris [Automatically generated definition].") AnnotationAssertion( "FMA:261782") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004508") AnnotationAssertion(rdfs:label "skeletal muscle tissue of levator palpebrae superioris") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (skeletal muscle tissue of trapezius) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A portion of skeletal muscle tissue that is part of a trapezius [Automatically generated definition].") AnnotationAssertion( "FMA:261938") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:261938") "skeletal muscle tissue of trapezius muscle") AnnotationAssertion( "UBERON:0004509") AnnotationAssertion(rdfs:label "skeletal muscle tissue of trapezius") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (skeletal muscle tissue of pectoralis major) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A portion of skeletal muscle tissue that is part of a pectoralis major [Automatically generated definition].") AnnotationAssertion( "FMA:261968") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:261968") "skeletal muscle tissue of pectoralis major muscle") AnnotationAssertion( "UBERON:0004510") AnnotationAssertion(rdfs:label "skeletal muscle tissue of pectoralis major") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (skeletal muscle tissue of rectus abdominis) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A portion of skeletal muscle tissue that is part of a rectus abdominis [Automatically generated definition].") AnnotationAssertion( "FMA:261924") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004511") AnnotationAssertion(rdfs:label "skeletal muscle tissue of rectus abdominis") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (skeletal muscle tissue of supraspinatus) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A portion of skeletal muscle tissue that is part of a supraspinatus [Automatically generated definition].") AnnotationAssertion( "FMA:261956") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:261956") "skeletal muscle tissue of supraspinatus muscle") AnnotationAssertion( "UBERON:0004512") AnnotationAssertion(rdfs:label "skeletal muscle tissue of supraspinatus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (skeletal muscle tissue of internal intercostal muscle) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A portion of skeletal muscle tissue that is part of a internal intercostal muscle [Automatically generated definition].") AnnotationAssertion( "FMA:261888") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004513") AnnotationAssertion(rdfs:label "skeletal muscle tissue of internal intercostal muscle") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (skeletal muscle tissue of transversus thoracis) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A portion of skeletal muscle tissue that is part of a transversus thoracis [Automatically generated definition].") AnnotationAssertion( "FMA:261892") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004514") AnnotationAssertion(rdfs:label "skeletal muscle tissue of transversus thoracis") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (smooth muscle tissue of bronchiole) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A portion of smooth muscle tissue that is part of a bronchiole [Automatically generated definition].") AnnotationAssertion( "FMA:261045") AnnotationAssertion( "FMA:261081") AnnotationAssertion(Annotation( "FMA:261081") "smooth muscle tissue of lobular bronchiole") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004515") AnnotationAssertion(rdfs:label "smooth muscle tissue of bronchiole") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (smooth muscle tissue of terminal bronchiole) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A portion of smooth muscle tissue that is part of a terminal bronchiole [Automatically generated definition].") AnnotationAssertion( "FMA:261051") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004516") AnnotationAssertion(rdfs:label "smooth muscle tissue of terminal bronchiole") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (smooth muscle tissue of respiratory bronchiole) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A portion of smooth muscle tissue that is part of a respiratory bronchiole [Automatically generated definition].") AnnotationAssertion( "FMA:261055") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004517") AnnotationAssertion(rdfs:label "smooth muscle tissue of respiratory bronchiole") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (muscle of vertebral column) AnnotationAssertion(Annotation( ) "A muscle that is attached to a vertebra of the vertebral column.") AnnotationAssertion( "FMA:22594") AnnotationAssertion(Annotation( "FMA:22594") "vertebral column muscle") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004518") AnnotationAssertion(rdfs:label "muscle of vertebral column") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (muscle of anal triangle) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "Any muscle organ that is part of a anal part of perineum.") AnnotationAssertion( "FMA:77304") AnnotationAssertion(Annotation( "FMA:77304") "anal triangle muscle") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004519") AnnotationAssertion(rdfs:label "muscle of anal triangle") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (striated muscle tissue of prostate) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A portion of striated muscle tissue that is part of a prostate gland [Automatically generated definition].") AnnotationAssertion( "FMA:45716") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004520") AnnotationAssertion(rdfs:label "striated muscle tissue of prostate") SubClassOf( ) SubClassOf( ) # Class: (vasculature of muscle organ) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A vasculature that is part of a muscle organ [Automatically generated definition].") AnnotationAssertion( "FMA:87123") AnnotationAssertion(Annotation( "FMA:87123") "muscular organ vasculature") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004521") AnnotationAssertion(rdfs:label "vasculature of muscle organ") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (vasculature of musculoskeletal system) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A vasculature that is part of a musculoskeletal system [Automatically generated definition].") AnnotationAssertion( "FMA:239607") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004522") AnnotationAssertion(rdfs:label "vasculature of musculoskeletal system") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (papillary muscle of right ventricle) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A papillary muscle that is part of a right ventricle [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0004544") AnnotationAssertion( "FMA:7259") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004523") AnnotationAssertion(rdfs:label "papillary muscle of right ventricle") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (papillary muscle of left ventricle) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A papillary muscle that is part of a left ventricle [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0001398") AnnotationAssertion( "FMA:9352") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004524") AnnotationAssertion(rdfs:label "papillary muscle of left ventricle") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (cardiac muscle tissue of trabecula carnea of right ventricle) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A portion of trabecula carnea cardiac muscle tissue that is part of a right ventricle [Automatically generated definition].") AnnotationAssertion( "FMA:84429") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004525") AnnotationAssertion(rdfs:label "cardiac muscle tissue of trabecula carnea of right ventricle") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (cardiac muscle tissue of trabecula carnea of left ventricle) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A portion of trabecula carnea cardiac muscle tissue that is part of a left ventricle [Automatically generated definition].") AnnotationAssertion( "FMA:84430") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004526") AnnotationAssertion(rdfs:label "cardiac muscle tissue of trabecula carnea of left ventricle") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (alveolar process of maxilla) AnnotationAssertion(Annotation( ) "The thickened ridge of bone that contains the tooth sockets on the maxilla.") AnnotationAssertion(Annotation( "WP"^^xsd:string) "In humans, the tooth-bearing bones are the maxilla and the mandible. The mineral content of alveolar bone is mostly hydroxyapatite, which is also found in enamel as the main inorganic substance") AnnotationAssertion( "UBERON:0001696") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0000396") AnnotationAssertion( "FMA:52897") AnnotationAssertion( "MA:0001492") AnnotationAssertion( "alveolar margin of maxilla") AnnotationAssertion( "alveolar part of maxilla") AnnotationAssertion( "alveolar process of maxilla") AnnotationAssertion( "alveolar ridge of maxilla") AnnotationAssertion( "lower alveolar ridge") AnnotationAssertion( "maxilla alveolar process") AnnotationAssertion(Annotation( "AAO:0000396") "pars dentalis of maxilla") AnnotationAssertion( "posterior alveolar ridge") AnnotationAssertion( "processus alveolaris (maxilla)") AnnotationAssertion(Annotation( "FMA:52897") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "processus alveolaris maxillae") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004527") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "alveolar process of maxilla") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/7/71/Gray157.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses(Annotation( "lexical"^^xsd:string) ) # Class: (alveolar ridge of mandible) AnnotationAssertion(Annotation( ) "The thickened ridge of bone that contains the tooth sockets on the mandible.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:52832") AnnotationAssertion( "alveolar margin of mandible") AnnotationAssertion( "alveolar part of mandible") AnnotationAssertion(Annotation( "FMA:52832") "alveolar process of mandible") AnnotationAssertion( "anterior alveolar ridge") AnnotationAssertion(Annotation( "FMA:52832") "pars alveolaris (mandibula)") AnnotationAssertion( "upper alveolar ridge") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:52832") "alveolar arch of mandible") AnnotationAssertion(Annotation( ) Annotation( ) "pars alveolaris mandibulae") AnnotationAssertion( "UBERON:0004528") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "alveolar ridge of mandible") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/9/9f/Mandibule.jpg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (anatomical projection) AnnotationAssertion(Annotation( ) Annotation( ) "A projection or outgrowth of tissue from a larger body or organ.") AnnotationAssertion( "should be declared disjoint from organ, but in some ontologies (e.g. ZFA), structures such as neural spines are classified as bones (and hence organs)") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0010278") Annotation( "AAO"^^xsd:string) Annotation( "AAO:BJB"^^xsd:string) "Anatomical structure that is a natural outgrowth, projection, or appendage. A process can be part of a bone, cartilage, or tissue.[AAO]") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0001834") Annotation( "TAO"^^xsd:string) Annotation( "TAO:wd"^^xsd:string) "Anatomical structure that is a natural outgrowth, projection, or appendage. A process can be part of a bone, cartilage, tissue, fin, scale, etc.[TAO]") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "VSAO:0000180") Annotation( "VSAO"^^xsd:string) Annotation( "TAO:curator") "Anatomical structure that is a natural outgrowth, projection, or appendage. A process can be part of a bone, cartilage, tissue, fin, scale, etc.[VSAO]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "anatomical process") AnnotationAssertion(Annotation( "VSAO:0000180") "process") AnnotationAssertion( ) AnnotationAssertion( "AAO:0010278") AnnotationAssertion( "FMA:67601") AnnotationAssertion( "HAO:0000822") AnnotationAssertion( "NCIT:C61549") AnnotationAssertion( "TAO:0001834") AnnotationAssertion( "VSAO:0000180") AnnotationAssertion( "XAO:0004020") AnnotationAssertion( "galen:Ridge") AnnotationAssertion(Annotation( "FMA:67601") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "processus") AnnotationAssertion( "projection") AnnotationAssertion(Annotation( "VSAO:0000180") "flange") AnnotationAssertion(Annotation( "VSAO:0000180") Annotation( ) "flanges") AnnotationAssertion(Annotation( "VSAO:0000180") "lamella") AnnotationAssertion(Annotation( "VSAO:0000180") Annotation( ) "lamellae") AnnotationAssertion(Annotation( "VSAO:0000180") "lamina") AnnotationAssertion(Annotation( "VSAO:0000180") "laminae") AnnotationAssertion( "organ process") AnnotationAssertion( "papilla") AnnotationAssertion( "process of organ") AnnotationAssertion(Annotation( "VSAO:0000180") Annotation( ) "processes") AnnotationAssertion(Annotation( "VSAO:0000180") "projection") AnnotationAssertion(Annotation( "VSAO:0000180") Annotation( ) "projections") AnnotationAssertion(Annotation( "VSAO:0000180") "ridge") AnnotationAssertion(Annotation( "VSAO:0000180") Annotation( ) "ridges") AnnotationAssertion(Annotation( "VSAO:0000180") "shelf") AnnotationAssertion(Annotation( "VSAO:0000180") Annotation( ) "shelves") AnnotationAssertion( "uberon") AnnotationAssertion( "anatomical protrusion") AnnotationAssertion( "protrusion") AnnotationAssertion( "spine") AnnotationAssertion( "UBERON:0004529") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "anatomical projection") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (bony projection) AnnotationAssertion(Annotation( "VSAO:wd") "Anatomical projection that is composed of bone tissue.") AnnotationAssertion( "FMA:75433") AnnotationAssertion( "ZFA:0001637") AnnotationAssertion(Annotation( "FMA:75433") "bone process") AnnotationAssertion( "projection of bone") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "ZFA:0001637") Annotation( ) "bony projections") AnnotationAssertion( "UBERON:0004530") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "bony projection") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete left side of organism) AnnotationAssertion( "BSPO:0000000") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004531") AnnotationAssertion(rdfs:label "obsolete left side of organism") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete right side of organism) AnnotationAssertion( "BSPO:0000007") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004532") AnnotationAssertion(rdfs:label "obsolete right side of organism") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (left testis) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A testis that is in the left side of the genitalia [Automatically generated definition].") AnnotationAssertion( "https://github.com/obophenotype/uberon/wiki/Modeling-paired-structures-Design-Pattern"^^xsd:anyURI) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37370") AnnotationAssertion( "FMA:7212") AnnotationAssertion( "MA:0001746") AnnotationAssertion( "NCIT:C49323") AnnotationAssertion(Annotation( "ncithesaurus:Left_Testis") "UMLS:C0227998") AnnotationAssertion(Annotation( "MA:0001746") "left testicle") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004533") AnnotationAssertion(rdfs:label "left testis") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (right testis) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A testis that is in the right side of the genitalia [Automatically generated definition].") AnnotationAssertion( "https://github.com/obophenotype/uberon/wiki/Modeling-paired-structures-Design-Pattern"^^xsd:anyURI) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37371") AnnotationAssertion( "FMA:7211") AnnotationAssertion( "MA:0001747") AnnotationAssertion( "NCIT:C49326") AnnotationAssertion( "OpenCyc:Mx4rvVjM25wpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Right_Testis") "UMLS:C0227997") AnnotationAssertion(Annotation( "MA:0001747") "right testicle") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004534") AnnotationAssertion(rdfs:label "right testis") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (cardiovascular system) AnnotationAssertion(Annotation( "BTO:0000088") "Anatomical system that has as its parts the heart and blood vessels.") AnnotationAssertion( "we treat cardiovascular as part of circulatory system, with the latter including other kinds of circulation, including lymph.") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000302") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0072528305 Kardong KV, Vertebrates: Comparative Anatomy, Function, Evolution (2006) p.451") "The vessels of the cardiovascular system are as varied as the diverse organs they supply. However, these variations are based on modifications of a fundamental plan of organization common to vertebrates.[well established][VHOG]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0011001") AnnotationAssertion( "BILA:0000016") AnnotationAssertion( "BTO:0000088") AnnotationAssertion( "CALOHA:TS-1297") AnnotationAssertion( "EFO:0000791") AnnotationAssertion( "EHDAA2:0000216") AnnotationAssertion( "EHDAA:394") AnnotationAssertion( "EMAPA:16104") AnnotationAssertion( "EMAPA:16370") AnnotationAssertion( "EV:0100017") AnnotationAssertion( "FMA:7161") AnnotationAssertion( "GAID:467") AnnotationAssertion( "MA:0000010") AnnotationAssertion( "MAT:0000016") AnnotationAssertion( "MESH:D002319") AnnotationAssertion( "MIAA:0000016") AnnotationAssertion( "NCIT:C12686") AnnotationAssertion( "OpenCyc:Mx4rvVjzG5wpEbGdrcN5Y29ycA") AnnotationAssertion( "TAO:0000010") AnnotationAssertion(Annotation( "ncithesaurus:Cardiovascular_System") "UMLS:C0007226") AnnotationAssertion( "VHOG:0000302") AnnotationAssertion( "WikipediaCategory:Cardiovascular_system") AnnotationAssertion( "XAO:0000100") AnnotationAssertion( "XAO:0001010") AnnotationAssertion( "ZFA:0000010") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0000088") "CV system") AnnotationAssertion(Annotation( "BTO:0000088") "Herz und Gefaesssystem") AnnotationAssertion( "UBERON:0004535") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "cardiovascular system") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lymph vasculature) AnnotationAssertion(Annotation( "ZFA:0005105") "A network of blunt ended vessels lacking direct connection to the blood vascular system. These vessels collect and drain fluids and macromolecules from interstitial spaces throughout the animal. They derive from a subpopulation of endothelial cells and have walls that are much thinner than the blood carrying vessels. Lymphatic vessels are usually classified as either superficial or deep.") AnnotationAssertion( "consider merging with parent") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0005105") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "A network of blunt ended vessels lacking direct connection to the blood vascular system. These vessels collect and drain fluids and macromolecules from interstitial spaces throughout the animal. They derive from a subpopulation of endothelial cells and have walls that are much thinner than the blood carrying vessels. Lymphatic vessels are usually classified as either superficial or deep.[TAO]") AnnotationAssertion( "FMA:63815") AnnotationAssertion( "TAO:0005105") AnnotationAssertion( "ZFA:0005105") AnnotationAssertion(Annotation( "FMA:63815") "lymphatic trunks and ducts") AnnotationAssertion( "lymphatic vasculature") AnnotationAssertion( "lymphatic vessel network") AnnotationAssertion(Annotation( "FMA:63815") "lymphatic vessels set") AnnotationAssertion( "set of lymphatic vessels") AnnotationAssertion(Annotation( "FMA:63815") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "trunci et ductus lymphatici") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "ZFA:0005105") Annotation( ) "lymph vessels") AnnotationAssertion( "UBERON:0004536") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "lymph vasculature") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (blood vasculature) AnnotationAssertion(Annotation( ) "A vascular network consisting of blood vessels.") AnnotationAssertion( "TAO:0001079") AnnotationAssertion( "ZFA:0001079") AnnotationAssertion( "blood vascular network") AnnotationAssertion( "set of blood vessels") AnnotationAssertion( "uberon") AnnotationAssertion( "blood system") AnnotationAssertion( "blood vessel system") AnnotationAssertion(Annotation( "TAO:0001079") "blood vessels") AnnotationAssertion( "UBERON:0004537") AnnotationAssertion(rdfs:label "blood vasculature") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (left kidney) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A kidney that is part of a left side of organism [Automatically generated definition].") AnnotationAssertion( "https://github.com/obophenotype/uberon/wiki/Modeling-paired-structures-Design-Pattern"^^xsd:anyURI) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:36589") AnnotationAssertion( "FMA:7205") AnnotationAssertion( "MA:0001655") AnnotationAssertion( "NCIT:C34006") AnnotationAssertion(Annotation( "ncithesaurus:Left_Kidney") "UMLS:C0227614") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004538") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "left kidney") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (right kidney) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A kidney that is part of a right side of organism [Automatically generated definition].") AnnotationAssertion( "https://github.com/obophenotype/uberon/wiki/Modeling-paired-structures-Design-Pattern"^^xsd:anyURI) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:36590") AnnotationAssertion( "FMA:7204") AnnotationAssertion( "MA:0001683") AnnotationAssertion( "NCIT:C34005") AnnotationAssertion(Annotation( "ncithesaurus:Right_Kidney") "UMLS:C0227613") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004539") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "right kidney") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (proper plantar digital artery) AnnotationAssertion(Annotation( "MA"^^xsd:string) "the MA term, even though plural, represents the singular, as it is an isa child of artery. We use the FMA set term as it is the closest match, but the semantics of set terms are unclear") AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37219") AnnotationAssertion( "FMA:71564") AnnotationAssertion( "MA:0001968") AnnotationAssertion(Annotation( "FMA:71564") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "arteriae digitales plantares propriae") AnnotationAssertion( "plantar digital artery proper") AnnotationAssertion(Annotation( "MA:0001968") "proper plantar digital arteries") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "arteriae digitales plantares propriae") AnnotationAssertion(Annotation( "FMA:71564") "set of plantar digital arteries proper") AnnotationAssertion( "UBERON:0004540") AnnotationAssertion(rdfs:label "proper plantar digital artery") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/3/3e/Gray555.png"^^xsd:anyURI) AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/a/a9/Gray1237.svg"^^xsd:anyURI) SubClassOf( ) # Class: (epididymis epithelium) AnnotationAssertion(Annotation( "MGI:csmith"^^xsd:string) Annotation( "MP:0004933") "The layer of secretory cells which lines the epididymis.") AnnotationAssertion( "BTO:0005768") AnnotationAssertion( "CALOHA:TS-2063") AnnotationAssertion( "EMAPA:30445") AnnotationAssertion( "FMA:19153") AnnotationAssertion( "MA:0002825") AnnotationAssertion(Annotation( "FMA:19153") "epididymis epithelium") AnnotationAssertion(Annotation( "FMA:19153") "epithelium of epididymis") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004544") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "epididymis epithelium") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (external capsule of telencephalon) AnnotationAssertion(Annotation( "MP:0020139") "Any of the series of white matter fiber tracts in the brain that run between the most lateral segment of the lentiform nucleus and the claustrum; the white matter of the external capsule contains fibers known as corticocortical association fibers which are responsible for connecting the cerebral cortex to another cortical area; the capsule appears as a thin white sheet of white matter and provides a route for cholinergic fibers from the basal forebrain to the cerebral cortex; it eventually joins the internal capsule around the lentiform nucleus.") AnnotationAssertion(Annotation( "MP:0020139") "brain external capsule") AnnotationAssertion(Annotation( "MA:0002896") "external capsule") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:EC") AnnotationAssertion( "BAMS:ec") AnnotationAssertion( "DHBA:10573") AnnotationAssertion( "DMBA:17765") AnnotationAssertion( "EMAPA:35331") AnnotationAssertion( "FMA:61959") AnnotationAssertion( "HBA:9243") AnnotationAssertion( "MA:0002896") AnnotationAssertion( "MBA:579") AnnotationAssertion( "NCIT:C32550") AnnotationAssertion( "NLXANAT:1010013") AnnotationAssertion(Annotation( "ncithesaurus:External_Capsule") "UMLS:C0152345") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "capsula externa") AnnotationAssertion(Annotation( "BAMS:ec") "corpus callosum external capsule") AnnotationAssertion( "UBERON:0004545") AnnotationAssertion(rdfs:label "external capsule of telencephalon") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/9/91/Telencephalon-Horiconatal.jpg"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (cribriform plate) AnnotationAssertion(Annotation( ) "A zone of the ethmoid that is received into the ethmoidal notch of the frontal bone and roofs in the nasal cavities. [WP,modified].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0004141") AnnotationAssertion( "EMAPA:19201") AnnotationAssertion( "FMA:52890") AnnotationAssertion( "MA:0002898") AnnotationAssertion(Annotation( ) "cribiform plate of ethmoid bone") AnnotationAssertion(Annotation( ) "horizontal lamina of ethmoid bone") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0004141") "ethmoid bone lamina cribrosa") AnnotationAssertion(Annotation( "BTO:0004141") "lamina cribrosa of ethmoid bone") AnnotationAssertion(Annotation( ) Annotation( ) "lamina cribrosa ossis ethmoidalis") AnnotationAssertion( "UBERON:0004546") AnnotationAssertion(rdfs:label "cribriform plate") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/9/93/Gray149.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "MA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (decidua capsularis) AnnotationAssertion(Annotation( "MP:0012530") "The layer of uterine endometrium overlying the implanted chorionic vesicle and facing the uterine cavity.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:35271") AnnotationAssertion( "FMA:86478") AnnotationAssertion( "MA:0002906") AnnotationAssertion( "NCIT:C32427") AnnotationAssertion(Annotation( "ncithesaurus:Decidua_Capsularis") "UMLS:C0230964") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "EMAPA:35271") "antimesometrial decidua") AnnotationAssertion( "UBERON:0004547") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "decidua capsularis") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (left eye) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An eye that is part of a left side of organism [Automatically generated definition].") AnnotationAssertion( "https://github.com/obophenotype/uberon/wiki/Modeling-paired-structures-Design-Pattern"^^xsd:anyURI) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37362") AnnotationAssertion( "FMA:12515") AnnotationAssertion( "MA:0002949") AnnotationAssertion( "NCIT:C119334") AnnotationAssertion(Annotation( "FMA:12515") "left eyeball") AnnotationAssertion(Annotation( "FMA:54450") "left orbital part of face") AnnotationAssertion(Annotation( "FMA:54450") "left orbital region") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004548") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "left eye") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (right eye) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An eye that is part of a right side of organism [Automatically generated definition].") AnnotationAssertion( "https://github.com/obophenotype/uberon/wiki/Modeling-paired-structures-Design-Pattern"^^xsd:anyURI) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37363") AnnotationAssertion( "FMA:12514") AnnotationAssertion( "MA:0002950") AnnotationAssertion( "NCIT:C119333") AnnotationAssertion(Annotation( "FMA:12514") "right eyeball") AnnotationAssertion(Annotation( "FMA:54449") "right orbital part of face") AnnotationAssertion(Annotation( "FMA:54449") "right orbital region") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004549") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "right eye") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (gastroesophageal sphincter) AnnotationAssertion(Annotation( "ISBN:0-683-40008-8"^^xsd:string) Annotation( "MP:0010153") "The thick circular layer of smooth gastric musculature encircling the gastroesophageal junction that functions to reduce backflow into the esophagus from the stomach.") AnnotationAssertion( "TODO - split? check FMA:63048 ! circular muscle layer of abdominal part of esophagus") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:18267") AnnotationAssertion( "FMA:14915") AnnotationAssertion( "MA:0002951") AnnotationAssertion( "NCIT:C33009") AnnotationAssertion(Annotation( "ncithesaurus:Lower_Esophageal_Sphincter") "UMLS:C0227192") AnnotationAssertion( "galen:LowerEsophagealSphincter") AnnotationAssertion(Annotation( "MA:0002951") Annotation( "MP:0010153") "cardiac sphincter") AnnotationAssertion(Annotation( "FMA:14915") "gastroesophageal sphincter") AnnotationAssertion( "gastroesophageal sphincter muscle") AnnotationAssertion(Annotation( "FMA:14915") "inferior esophageal sphincter") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "LES") AnnotationAssertion(Annotation( ) "cardiac sphincter") AnnotationAssertion(Annotation( "MP:0010153") Annotation( ) "constrictor cardiae") AnnotationAssertion(Annotation( ) "esophageal sphincter") AnnotationAssertion(Annotation( ) "esophageal sphincter%2c lower") AnnotationAssertion(Annotation( ) "esophageal-cardiac junction") AnnotationAssertion(Annotation( ) "esophagogastric junction") AnnotationAssertion(Annotation( ) "gastro-esophageal junction") AnnotationAssertion(Annotation( ) "gastro-esophageal sphincter") AnnotationAssertion(Annotation( ) "gastro-oesophageal junction") AnnotationAssertion(Annotation( ) "gastroesophageal junction") AnnotationAssertion(Annotation( ) "gastroesophageal sphincter") AnnotationAssertion(Annotation( ) "lower esophageal sphincter") AnnotationAssertion(Annotation( "MA:0002951") "lower esophageal sphincter") AnnotationAssertion( "UBERON:0004550") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "gastroesophageal sphincter") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete set of proper plantar digital arteries) AnnotationAssertion( "this class was made obsolete, as uberon does not include 'Set of X' classes. For now, the FMA class for set of plantar digital arteries proper is under UBERON:0004540, but it is unclear if this is correct") AnnotationAssertion( "FMA:71564") AnnotationAssertion(Annotation( "FMA:71564") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "arteriae digitales plantares propriae") AnnotationAssertion(Annotation( "FMA:71564") "plantar digital arteries proper") AnnotationAssertion(Annotation( "FMA:71564") "plantar digital arteries proper set") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004551") AnnotationAssertion(rdfs:label "obsolete set of proper plantar digital arteries") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (digital artery) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An artery that is part of a digit [Automatically generated definition].") AnnotationAssertion( "check part_of - do we need term for digit + metacarpal/tarsal bones?") AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37076") AnnotationAssertion( "MA:0001941") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004552") AnnotationAssertion(rdfs:label "digital artery") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (forelimb digital artery) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A digital artery that is part of a forelimb [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37210") AnnotationAssertion( "MA:0001953") AnnotationAssertion( "digital artery of manus") AnnotationAssertion(Annotation( "MA:0001953") "forelimb digital arteries") AnnotationAssertion(Annotation( "NCBITaxon:8782"^^xsd:string) Annotation( "OBOL:automatic"^^xsd:string) Annotation( ) "wing digital artery") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004553") AnnotationAssertion(rdfs:label "forelimb digital artery") SubClassOf( ) SubClassOf( ) # Class: (hindlimb digital artery) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A digital artery that is part of a hindlimb [Automatically generated definition].") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37214") AnnotationAssertion( "FMA:69713") AnnotationAssertion( "MA:0001964") AnnotationAssertion(Annotation( "FMA:69713") "digital artery of foot") AnnotationAssertion(Annotation( "MA:0001964") "hindlimb digital arteries") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004554") AnnotationAssertion(rdfs:label "hindlimb digital artery") SubClassOf( ) SubClassOf( ) # Class: (proper palmar digital vein) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37229") AnnotationAssertion( "FMA:22926") AnnotationAssertion( "MA:0002126") AnnotationAssertion(Annotation( "FMA:22926") "common palmar digital venous tributary") AnnotationAssertion(Annotation( ) "distal palmar digital vein") AnnotationAssertion(Annotation( "MA:0002126") "proper palmal vein") AnnotationAssertion(Annotation( "MA:0002126") "proper palmar vein") AnnotationAssertion(Annotation( "FMA:22926") "tributary of common palmar digital vein") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004561") AnnotationAssertion(rdfs:comment "Some sources distinguish between the \"proper palmar digital veins\", which are more distal, and the \"common palmar digital veins\", which are more proximal.") AnnotationAssertion(rdfs:label "proper palmar digital vein") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA/obol"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (digital vein) AnnotationAssertion(Annotation( "ncithesaurus:Digital_Vein") "Any vein containing deoxygenated blood that is located in a finger or toe.") AnnotationAssertion( "check part_of - do we need term for digit + metacarpal/tarsal bones?") AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37141") AnnotationAssertion( "MA:0002101") AnnotationAssertion( "NCIT:C53043") AnnotationAssertion(Annotation( "ncithesaurus:Digital_Vein") "UMLS:C0447128") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004562") AnnotationAssertion(rdfs:label "digital vein") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (forelimb digital vein) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A digital vein that is part of a forelimb.") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37223") AnnotationAssertion( "MA:0002120") AnnotationAssertion(Annotation( "MA:0002120") "forelimb digital veins") AnnotationAssertion( "vein of finger") AnnotationAssertion( "vein of manual digit") AnnotationAssertion(Annotation( "NCBITaxon:8782"^^xsd:string) Annotation( "OBOL:automatic"^^xsd:string) Annotation( ) "wing digital vein") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004563") AnnotationAssertion(rdfs:label "forelimb digital vein") SubClassOf( ) SubClassOf( ) # Class: (hindlimb digital vein) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A digital vein that is part of a hindlimb [Automatically generated definition].") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37224") AnnotationAssertion( "MA:0002133") AnnotationAssertion(Annotation( "MA:0002133") "hindlimb digital veins") AnnotationAssertion( "vein of pedal digit") AnnotationAssertion( "vein of toe") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004564") AnnotationAssertion(rdfs:label "hindlimb digital vein") SubClassOf( ) SubClassOf( ) # Class: (systemic arterial system) AnnotationAssertion(Annotation( ) Annotation( ) "The part of the arterial system which carries oxygenated blood away from the heart to the body, and returns deoxygenated blood back to the heart.") AnnotationAssertion( ) AnnotationAssertion( "FMA:45623") AnnotationAssertion(Annotation( "FMA:45623") "systemic arterial circulatory system") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004571") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "systemic arterial system") SubClassOf(Annotation( "MA-inferred") ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (arterial system) AnnotationAssertion(Annotation( ) "The part of the cardiovascular system consisting of all arteries.") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000273") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "DOI:10.1196/annals.1341.002 Bishopric NH, Evolution of the heart from bacteria to man. Annals of the New York Academy of Sciences (2005)") "The appearance of Chordata and subsequently the vertebrates is accompanied by a rapid structural diversification of this primitive linear heart: looping, unidirectional circulation, an enclosed vasculature, and the conduction system.[well established][VHOG]") AnnotationAssertion( ) AnnotationAssertion( "BTO:0004690") AnnotationAssertion( "EHDAA2:0000143") AnnotationAssertion( "EHDAA:396") AnnotationAssertion( "EMAPA:16201") AnnotationAssertion( "EMAPA:16371") AnnotationAssertion( "MA:0002719") AnnotationAssertion( "VHOG:0000273") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004572") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "arterial system") SubClassOf(Annotation( "MA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (systemic artery) AnnotationAssertion(Annotation( ) Annotation( ) "An artery of the systemic circulation, which is the part of the cardiovascular system which carries oxygenated blood away from the heart, to the body, and returns deoxygenated blood back to the heart.") AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37126") AnnotationAssertion( "FMA:66464") AnnotationAssertion(Annotation( "FMA:66464") "systemic arterial subtree") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004573") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "systemic artery") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (systemic venous system) AnnotationAssertion(Annotation( ) Annotation( "ISBN:0073040584"^^xsd:string) "The part of the venous system that drains the general body tissues[Kardong].") AnnotationAssertion(Annotation( ) "In human anatomy, the systemic venous system refers to veins that drain into the right atrium without passing through two vascular beds (i.e. they originate from a set of capillaries and do not pass through a second set of capillaries before reaching the right side of the heart). The term systemic venous system is often used to differentiate veins from veins that drain the pulmonary system (the pulmonary venous system) and veins that drain the digestive tract (the portal venous system). Large veins that are considered part of the systemic venous system are the: Superior vena cava; Inferior vena cava[WP]") AnnotationAssertion(Annotation( "FMA") Annotation( "FMA:45626") "Subdivision of cardiovascular system which has as its parts the right side of heart, the superior vena cava and the inferior vena cava[FMA]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000277") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "DOI:10.1196/annals.1341.002 Bishopric NH, Evolution of the heart from bacteria to man. Annals of the New York Academy of Sciences (2005)") "The appearance of Chordata and subsequently the vertebrates is accompanied by a rapid structural diversification of this primitive linear heart: looping, unidirectional circulation, an enclosed vasculature, and the conduction system.[well established][VHOG]") AnnotationAssertion( ) AnnotationAssertion( "FMA:45626") AnnotationAssertion(Annotation( "FMA:45626") "systemic venous circulatory system") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004581") AnnotationAssertion(rdfs:label "systemic venous system") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (venous system) AnnotationAssertion(Annotation( ) "The part of the cardiovascular system consisting of all venous vessels. In vertebrates with a double circulation, this can be divided into systemic and pulmonary portions.") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000277") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "DOI:10.1196/annals.1341.002 Bishopric NH, Evolution of the heart from bacteria to man. Annals of the New York Academy of Sciences (2005)") "The appearance of Chordata and subsequently the vertebrates is accompanied by a rapid structural diversification of this primitive linear heart: looping, unidirectional circulation, an enclosed vasculature, and the conduction system.[well established][VHOG]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0004692") AnnotationAssertion( "EHDAA2:0002171") AnnotationAssertion( "EHDAA:486") AnnotationAssertion( "EMAPA:16240") AnnotationAssertion( "MA:0002720") AnnotationAssertion( "NCIT:C33858") AnnotationAssertion(Annotation( "ncithesaurus:Venous_System") "UMLS:C1267406") AnnotationAssertion( "VHOG:0000277") AnnotationAssertion( "vein system") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004582") AnnotationAssertion(rdfs:label "venous system") SubClassOf(Annotation( "MA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (sphincter muscle) AnnotationAssertion(Annotation( ) "A structure, usually a circular muscle, that normally maintains constriction of a natural body passage or orifice and which relaxes as required by normal physiological functioning.") AnnotationAssertion(Annotation( "FMA"^^xsd:string) "FMA class is not a subtype of muscle") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:75004") AnnotationAssertion( "NCIT:C28381") AnnotationAssertion(Annotation( "ncithesaurus:Sphincter") "UMLS:C1409894") AnnotationAssertion( "sphincter") AnnotationAssertion( "uberon") AnnotationAssertion( "circular muscle") AnnotationAssertion( "UBERON:0004590") AnnotationAssertion(rdfs:label "sphincter muscle") SubClassOf( ) # Class: (rib 1) AnnotationAssertion(Annotation( ) "The first rib of the rib cage.") AnnotationAssertion( "elements are to be defined spatially/topologically") AnnotationAssertion( "1"^^xsd:nonNegativeInteger) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:19529") AnnotationAssertion( "FMA:7597") AnnotationAssertion( "MA:0001401") AnnotationAssertion( "NCIT:C52770") AnnotationAssertion(Annotation( "ncithesaurus:Rib_1") "UMLS:C1709945") AnnotationAssertion(Annotation( ) "costa I") AnnotationAssertion(Annotation( "FMA:7597") "costa prima (I)") AnnotationAssertion(Annotation( "FMA:7597") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "costa prima [I]") AnnotationAssertion(Annotation( "FMA:7597") "first rib") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "costa prima") AnnotationAssertion( "UBERON:0004601") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "rib 1") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/f/fa/Gray124.png"^^xsd:anyURI) SubClassOf( ) # Class: (rib 2) AnnotationAssertion(Annotation( ) "The second rib of the rib cage.") AnnotationAssertion( "elements are to be defined spatially/topologically") AnnotationAssertion( "2"^^xsd:nonNegativeInteger) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:19530") AnnotationAssertion( "FMA:7620") AnnotationAssertion( "MA:0001402") AnnotationAssertion( "NCIT:C52766") AnnotationAssertion(Annotation( "ncithesaurus:Rib_2") "UMLS:C1709949") AnnotationAssertion(Annotation( ) "costa II") AnnotationAssertion(Annotation( "FMA:7620") "costa secunda (II)") AnnotationAssertion(Annotation( "FMA:7620") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "costa secunda [II]") AnnotationAssertion(Annotation( "FMA:7620") "second rib") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "costa secunda") AnnotationAssertion( "UBERON:0004602") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "rib 2") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/a/a5/Gray125.png"^^xsd:anyURI) SubClassOf( ) # Class: (rib 3) AnnotationAssertion(Annotation( ) Annotation( "ncithesaurus:Rib_3") "The third rib counting from the top of the rib cage down. Note that members of this class are not necessarily homologous[ncit,modified].") AnnotationAssertion( "elements are to be defined spatially/topologically") AnnotationAssertion( "3"^^xsd:nonNegativeInteger) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:19531") AnnotationAssertion( "FMA:7638") AnnotationAssertion( "MA:0001403") AnnotationAssertion( "NCIT:C52765") AnnotationAssertion(Annotation( "ncithesaurus:Rib_3") "UMLS:C1709950") AnnotationAssertion(Annotation( ) "costa III") AnnotationAssertion(Annotation( "FMA:7638") "third rib") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004603") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "rib 3") SubClassOf( ) # Class: (rib 4) AnnotationAssertion(Annotation( ) Annotation( "ncithesaurus:Rib_4") "The fourth rib counting from the top of the rib cage down. Note that members of this class are not necessarily homologous[ncit,modified].") AnnotationAssertion( "elements are to be defined spatially/topologically") AnnotationAssertion( "4"^^xsd:nonNegativeInteger) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:19532") AnnotationAssertion( "FMA:7749") AnnotationAssertion( "MA:0001404") AnnotationAssertion( "NCIT:C52764") AnnotationAssertion(Annotation( "ncithesaurus:Rib_4") "UMLS:C1709951") AnnotationAssertion(Annotation( ) "costa IV") AnnotationAssertion(Annotation( "FMA:7749") "fourth rib") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004604") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "rib 4") SubClassOf( ) # Class: (rib 5) AnnotationAssertion(Annotation( ) Annotation( "ncithesaurus:Rib_5") "The fifth rib counting from the top of the rib cage down. Note that members of this class are not necessarily homologous[ncit,modified].") AnnotationAssertion( "elements are to be defined spatially/topologically") AnnotationAssertion( "5"^^xsd:nonNegativeInteger) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:19533") AnnotationAssertion( "FMA:7776") AnnotationAssertion( "MA:0001405") AnnotationAssertion( "NCIT:C52763") AnnotationAssertion(Annotation( "ncithesaurus:Rib_5") "UMLS:C1711376") AnnotationAssertion(Annotation( ) "costa V") AnnotationAssertion(Annotation( "FMA:7776") "fifth rib") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004605") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "rib 5") SubClassOf( ) # Class: (rib 6) AnnotationAssertion(Annotation( ) Annotation( "ncithesaurus:Rib_6") "The sixth rib counting from the top of the rib cage down. Note that members of this class are not necessarily homologous[ncit,modified].") AnnotationAssertion( "elements are to be defined spatially/topologically") AnnotationAssertion( "6"^^xsd:nonNegativeInteger) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:19534") AnnotationAssertion( "FMA:8147") AnnotationAssertion( "MA:0001406") AnnotationAssertion( "NCIT:C52762") AnnotationAssertion(Annotation( "ncithesaurus:Rib_6") "UMLS:C1709952") AnnotationAssertion(Annotation( ) "costa VI") AnnotationAssertion(Annotation( "FMA:8147") "sixth rib") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004606") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "rib 6") SubClassOf( ) # Class: (rib 7) AnnotationAssertion(Annotation( ) Annotation( "ncithesaurus:Rib_7") "The seventh rib counting from the top of the rib cage down. Note that members of this class are not necessarily homologous[ncit,modified].") AnnotationAssertion( "elements are to be defined spatially/topologically") AnnotationAssertion( "7"^^xsd:nonNegativeInteger) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:19535") AnnotationAssertion( "FMA:7830") AnnotationAssertion( "MA:0001407") AnnotationAssertion( "NCIT:C52761") AnnotationAssertion(Annotation( "ncithesaurus:Rib_7") "UMLS:C1709953") AnnotationAssertion(Annotation( ) "costa VII") AnnotationAssertion(Annotation( "FMA:7830") "seventh rib") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004607") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "rib 7") SubClassOf( ) # Class: (rib 9) AnnotationAssertion(Annotation( ) Annotation( "ncithesaurus:Rib_9") "The ninth rib counting from the top of the rib cage down. Note that members of this class are not necessarily homologous[ncit,modified].") AnnotationAssertion( "elements are to be defined spatially/topologically") AnnotationAssertion( "9"^^xsd:nonNegativeInteger) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:19537") AnnotationAssertion( "FMA:8337") AnnotationAssertion( "MA:0001409") AnnotationAssertion( "NCIT:C52759") AnnotationAssertion(Annotation( "ncithesaurus:Rib_9") "UMLS:C1709955") AnnotationAssertion(Annotation( ) "costa IX") AnnotationAssertion(Annotation( "FMA:8337") "ninth rib") AnnotationAssertion(Annotation( "NCBITaxon:9606"^^xsd:string) Annotation( "PMCID:PMC1327870") "lower false rib") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004608") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "rib 9") SubClassOf( ) # Class: (rib 10) AnnotationAssertion(Annotation( ) "The tenth rib has only a single articular facet on its head. [WP,unvetted].") AnnotationAssertion( "elements are to be defined spatially/topologically") AnnotationAssertion(Annotation( "PMC1327870") "May sometimes be a floating rib in humans") AnnotationAssertion( "10"^^xsd:nonNegativeInteger) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:19538") AnnotationAssertion( "FMA:8418") AnnotationAssertion( "MA:0001410") AnnotationAssertion( "NCIT:C52769") AnnotationAssertion(Annotation( "ncithesaurus:Rib_10") "UMLS:C1709946") AnnotationAssertion(Annotation( ) "costa X") AnnotationAssertion(Annotation( "FMA:8418") "tenth rib") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004609") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "rib 10") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/8/8d/Gray126.png"^^xsd:anyURI) SubClassOf( ) # Class: (rib 11) AnnotationAssertion(Annotation( ) "The eleventh rib has a single articular facet on the head, which is of rather large size. It has no necks or tubercles, and is pointed at its anterior ends. The eleventh has a slight angle and a shallow costal groove. [WP,unvetted].") AnnotationAssertion( "elements are to be defined spatially/topologically") AnnotationAssertion( "11"^^xsd:nonNegativeInteger) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:19539") AnnotationAssertion( "FMA:8499") AnnotationAssertion( "MA:0001411") AnnotationAssertion( "NCIT:C52768") AnnotationAssertion(Annotation( "ncithesaurus:Rib_11") "UMLS:C1709947") AnnotationAssertion(Annotation( ) "costa XI") AnnotationAssertion(Annotation( "FMA:8499") "eleventh rib") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004610") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "rib 11") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/d/db/Gray127.png"^^xsd:anyURI) SubClassOf( ) # Class: (rib 12) AnnotationAssertion(Annotation( ) "In humans: The twelfth rib has a single articular facet on the head, which is of rather large size. It has no necks or tubercles, and is pointed at its anterior ends. The twelfth has angle nor costal groove; it is much shorter than the eleventh rib, and its head is inclined slightly downward. Sometimes the twelfth rib is even shorter than the first rib. [WP,unvetted].") AnnotationAssertion( "elements are to be defined spatially/topologically") AnnotationAssertion( "12"^^xsd:nonNegativeInteger) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:19540") AnnotationAssertion( "FMA:8515") AnnotationAssertion( "MA:0001412") AnnotationAssertion( "NCIT:C52767") AnnotationAssertion(Annotation( "ncithesaurus:Rib_12") "UMLS:C1709948") AnnotationAssertion(Annotation( ) "costa XII") AnnotationAssertion(Annotation( "FMA:8515") "twelfth rib") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004611") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "rib 12") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/f/fe/Gray128.png"^^xsd:anyURI) SubClassOf( ) # Class: (mammalian cervical vertebra 3) AnnotationAssertion(Annotation( ) Annotation( "ncithesaurus:C3_Vertebra") "The third of the seven cervical vertebrae[ncit,modified].") AnnotationAssertion( "under discussion: whether to generalize this beyond mammals, making it purely order-defined") AnnotationAssertion( "elements are to be defined spatially/topologically. all mammals have 7 cervical vertebrae") AnnotationAssertion( "3"^^xsd:nonNegativeInteger) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:19433") AnnotationAssertion( "FMA:12521") AnnotationAssertion( "MA:0001423") AnnotationAssertion( "NCIT:C32241") AnnotationAssertion(Annotation( "ncithesaurus:C3_Vertebra") "UMLS:C0459939") AnnotationAssertion(Annotation( "FMA:12521") "C3 vertebra") AnnotationAssertion(Annotation( "MA:0001423") "cervical vertebra 3") AnnotationAssertion(Annotation( "UBERONTEMP:aeb6ac70-fd18-403d-a0b9-dd03942c7812") "cervical vertebrae 3") AnnotationAssertion(Annotation( "FMA:12521") "third cervical vertebra") AnnotationAssertion(Annotation( "UBERONTEMP:aeb6ac70-fd18-403d-a0b9-dd03942c7812") "third cervical vertebra of axial skeleton") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004612") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "mammalian cervical vertebra 3") SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (mammalian cervical vertebra 4) AnnotationAssertion(Annotation( ) Annotation( "ncithesaurus:C4_Vertebra") "The fourth of the seven cervical vertebrae[ncit,modified].") AnnotationAssertion( "elements are to be defined spatially/topologically. all mammals have 7 cervical vertebrae") AnnotationAssertion( "4"^^xsd:nonNegativeInteger) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:19434") AnnotationAssertion( "FMA:12522") AnnotationAssertion( "MA:0001424") AnnotationAssertion( "NCIT:C32242") AnnotationAssertion(Annotation( "ncithesaurus:C4_Vertebra") "UMLS:C0459941") AnnotationAssertion(Annotation( "FMA:12522") "C4 vertebra") AnnotationAssertion(Annotation( "MA:0001424") "cervical vertebra 4") AnnotationAssertion(Annotation( "FMA:12522") "fourth cervical vertebra") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004613") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "mammalian cervical vertebra 4") SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (mammalian cervical vertebra 5) AnnotationAssertion(Annotation( ) Annotation( "ncithesaurus:C5_Vertebra") "The fifth of the seven cervical vertebrae[ncit,modified].") AnnotationAssertion( "elements are to be defined spatially/topologically. all mammals have 7 cervical vertebrae") AnnotationAssertion( "5"^^xsd:nonNegativeInteger) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:19435") AnnotationAssertion( "FMA:12523") AnnotationAssertion( "MA:0001425") AnnotationAssertion( "NCIT:C32243") AnnotationAssertion(Annotation( "ncithesaurus:C5_Vertebra") "UMLS:C0459943") AnnotationAssertion(Annotation( "FMA:12523") "C5 vertebra") AnnotationAssertion(Annotation( "MA:0001425") "cervical vertebra 5") AnnotationAssertion(Annotation( "FMA:12523") "fifth cervical vertebra") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004614") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "mammalian cervical vertebra 5") SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (mammalian cervical vertebra 6) AnnotationAssertion(Annotation( ) Annotation( "ncithesaurus:C6_Vertebra") "The sixth of the seven cervical vertebrae[ncit,modified].") AnnotationAssertion( "elements are to be defined spatially/topologically. all mammals have 7 cervical vertebrae") AnnotationAssertion( "6"^^xsd:nonNegativeInteger) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:19466") AnnotationAssertion( "FMA:12524") AnnotationAssertion( "MA:0001426") AnnotationAssertion( "NCIT:C32244") AnnotationAssertion(Annotation( "ncithesaurus:C6_Vertebra") "UMLS:C0459944") AnnotationAssertion(Annotation( "FMA:12524") "C6 vertebra") AnnotationAssertion(Annotation( "MA:0001426") "cervical vertebra 6") AnnotationAssertion(Annotation( "FMA:12524") "sixth cervical vertebra") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004615") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "mammalian cervical vertebra 6") SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (mammalian cervical vertebra 7) AnnotationAssertion(Annotation( ) "Vertebra prominens is the proper name for the seventh cervical vertebra. The most distinctive characteristic of this vertebra is the existence of a long and prominent spinous process which is palpable from the skin surface, hence the name. This spinous process is thick, nearly horizontal in direction, not bifurcated, but terminating in a tubercle to which the lower end of the ligamentum nuchae is attached. The seventh cervical vertebra (C7) has the most prominent spinous process only in about 70% of people; in the remainder, either C6 or T1 (the first thoracic vertebra) will be the most prominent. The transverse processes are of considerable size, their posterior roots are large and prominent, while the anterior are small and faintly marked; the upper surface of each has usually a shallow sulcus for the eighth spinal nerve, and its extremity seldom presents more than a trace of bifurcation. The foramen transversarium may be as large as that in the other cervical vertebrae, but is generally smaller on one or both sides; occasionally it is double, sometimes it is absent. On the left side it occasionally gives passage to the vertebral artery; more frequently the vertebral vein traverses it on both sides; but the usual arrangement is for both artery and vein to pass in front of the transverse process, and not through the foramen. Sometimes the anterior root of the transverse process attains a large size and exists as a separate bone, which is known as a cervical rib.") AnnotationAssertion( "elements are to be defined spatially/topologically. all mammals have 7 cervical vertebrae") AnnotationAssertion( "7"^^xsd:nonNegativeInteger) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:19467") AnnotationAssertion( "FMA:12525") AnnotationAssertion( "MA:0001427") AnnotationAssertion( "NCIT:C32245") AnnotationAssertion(Annotation( "ncithesaurus:C7_Vertebra") "UMLS:C0223176") AnnotationAssertion(Annotation( "FMA:12525") "C7 vertebra") AnnotationAssertion(Annotation( "MA:0001427") "cervical vertebra 7") AnnotationAssertion(Annotation( "FMA:12525") "prominent vertebra") AnnotationAssertion(Annotation( "FMA:12525") "seventh cervical vertebra") AnnotationAssertion(Annotation( "FMA:12525") "vertebra prominens (CVII)") AnnotationAssertion(Annotation( "FMA:12525") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "vertebra prominens [C VII]") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004616") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "mammalian cervical vertebra 7") SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (lumbar vertebra 1) AnnotationAssertion(Annotation( ) Annotation( "ncithesaurus:L1_Vertebra") "The first lumbar vertebra counting from the top down. Note that members of this class are not necessarily homologous[ncit,modified].") AnnotationAssertion( "elements are to be defined spatially/topologically") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:19472") AnnotationAssertion( "FMA:13072") AnnotationAssertion( "MA:0001428") AnnotationAssertion( "NCIT:C32899") AnnotationAssertion(Annotation( "ncithesaurus:L1_Vertebra") "UMLS:C0223492") AnnotationAssertion(Annotation( "FMA:13072") "L1 vertebra") AnnotationAssertion(Annotation( "FMA:13072") "first lumbar vertebra") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004617") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "lumbar vertebra 1") SubClassOf( ) # Class: (lumbar vertebra 2) AnnotationAssertion(Annotation( ) Annotation( "ncithesaurus:L2_Vertebra") "The second lumbar vertebra counting from the top down. Note that members of this class are not necessarily homologous[ncit,modified].") AnnotationAssertion( "elements are to be defined spatially/topologically") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:19570") AnnotationAssertion( "FMA:13073") AnnotationAssertion( "MA:0001429") AnnotationAssertion( "NCIT:C32900") AnnotationAssertion(Annotation( "ncithesaurus:L2_Vertebra") "UMLS:C0223507") AnnotationAssertion(Annotation( "FMA:13073") "L2 vertebra") AnnotationAssertion(Annotation( "FMA:13073") "second lumbar vertebra") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004618") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "lumbar vertebra 2") SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (lumbar vertebra 3) AnnotationAssertion(Annotation( ) Annotation( "ncithesaurus:L3_Vertebra") "The third lumbar vertebra counting from the top down. Note that members of this class are not necessarily homologous[ncit,modified].") AnnotationAssertion( "elements are to be defined spatially/topologically") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:19571") AnnotationAssertion( "FMA:13074") AnnotationAssertion( "MA:0001430") AnnotationAssertion( "NCIT:C32901") AnnotationAssertion(Annotation( "ncithesaurus:L3_Vertebra") "UMLS:C0223522") AnnotationAssertion(Annotation( "FMA:13074") "L3 vertebra") AnnotationAssertion(Annotation( "FMA:13074") "third lumbar vertebra") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004619") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "lumbar vertebra 3") SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (lumbar vertebra 4) AnnotationAssertion(Annotation( ) Annotation( "ncithesaurus:L4_Vertebra") "The fourth lumbar vertebra counting from the top down. Note that members of this class are not necessarily homologous[ncit,modified].") AnnotationAssertion( "elements are to be defined spatially/topologically") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:19572") AnnotationAssertion( "FMA:13075") AnnotationAssertion( "MA:0001431") AnnotationAssertion( "NCIT:C32902") AnnotationAssertion(Annotation( "ncithesaurus:L4_Vertebra") "UMLS:C0223537") AnnotationAssertion(Annotation( "FMA:13075") "L4 vertebra") AnnotationAssertion(Annotation( "FMA:13075") "fourth lumbar vertebra") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004620") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "lumbar vertebra 4") SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (lumbar vertebra 5) AnnotationAssertion(Annotation( ) Annotation( "ncithesaurus:L5_Vertebra") "The fifth lumbar vertebra counting from the top down. Note that members of this class are not necessarily homologous[ncit,modified].") AnnotationAssertion( "elements are to be defined spatially/topologically") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:19573") AnnotationAssertion( "FMA:13076") AnnotationAssertion( "MA:0001432") AnnotationAssertion( "NCIT:C32903") AnnotationAssertion(Annotation( "ncithesaurus:L5_Vertebra") "UMLS:C0223552") AnnotationAssertion(Annotation( "FMA:13076") "L5 vertebra") AnnotationAssertion(Annotation( "FMA:13076") "fifth lumbar vertebra") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004621") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "lumbar vertebra 5") SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (sacral vertebra 1) AnnotationAssertion( "elements are to be defined spatially/topologically") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:19588") AnnotationAssertion( "FMA:13077") AnnotationAssertion( "MA:0001434") AnnotationAssertion( "NCIT:C33498") AnnotationAssertion(Annotation( "ncithesaurus:S1_Vertebra") "UMLS:C0223598") AnnotationAssertion(Annotation( "FMA:13077") "S1 vertebra") AnnotationAssertion(Annotation( "FMA:13077") "first sacral segment") AnnotationAssertion(Annotation( "FMA:13077") "first sacral vertebra") AnnotationAssertion(Annotation( "FMA:13077") "first segment of sacrum") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004622") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "sacral vertebra 1") SubClassOf( ) # Class: (sacral vertebra 2) AnnotationAssertion( "elements are to be defined spatially/topologically") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:19589") AnnotationAssertion( "FMA:13078") AnnotationAssertion( "MA:0001435") AnnotationAssertion( "NCIT:C33499") AnnotationAssertion(Annotation( "ncithesaurus:S2_Vertebra") "UMLS:C0223599") AnnotationAssertion(Annotation( "FMA:13078") "S2 vertebra") AnnotationAssertion(Annotation( "FMA:13078") "second sacral segment") AnnotationAssertion(Annotation( "FMA:13078") "second sacral vertebra") AnnotationAssertion(Annotation( "FMA:13078") "second segment of sacrum") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004623") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "sacral vertebra 2") SubClassOf( ) # Class: (sacral vertebra 3) AnnotationAssertion( "elements are to be defined spatially/topologically") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:19590") AnnotationAssertion( "FMA:13079") AnnotationAssertion( "MA:0001436") AnnotationAssertion( "NCIT:C33500") AnnotationAssertion(Annotation( "ncithesaurus:S3_Vertebra") "UMLS:C0223600") AnnotationAssertion(Annotation( "FMA:13079") "S3 vertebra") AnnotationAssertion(Annotation( "FMA:13079") "third sacral segment") AnnotationAssertion(Annotation( "FMA:13079") "third sacral vertebra") AnnotationAssertion(Annotation( "FMA:13079") "third segment of sacrum") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004624") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "sacral vertebra 3") SubClassOf( ) # Class: (sacral vertebra 4) AnnotationAssertion( "elements are to be defined spatially/topologically") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:19591") AnnotationAssertion( "FMA:13080") AnnotationAssertion( "MA:0001437") AnnotationAssertion( "NCIT:C33501") AnnotationAssertion(Annotation( "ncithesaurus:S4_Vertebra") "UMLS:C0223601") AnnotationAssertion(Annotation( "FMA:13080") "S4 vertebra") AnnotationAssertion(Annotation( "FMA:13080") "fourth sacral segment") AnnotationAssertion(Annotation( "FMA:13080") "fourth sacral vertebra") AnnotationAssertion(Annotation( "FMA:13080") "fourth segment of sacrum") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004625") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "sacral vertebra 4") SubClassOf( ) # Class: (thoracic vertebra 1) AnnotationAssertion(Annotation( ) Annotation( "ncithesaurus:T1_Vertebra") "The first thoracic vertebra counting from the top down. Note that members of this class are not necessarily homologous[ncit,modified].") AnnotationAssertion( "elements are to be defined spatially/topologically") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:19542") AnnotationAssertion( "FMA:9165") AnnotationAssertion( "MA:0001438") AnnotationAssertion( "NCIT:C33720") AnnotationAssertion(Annotation( "ncithesaurus:T1_Vertebra") "UMLS:C0459933") AnnotationAssertion(Annotation( "FMA:9165") "T1 vertebra") AnnotationAssertion(Annotation( "FMA:9165") "first dorsal vertebra") AnnotationAssertion(Annotation( "FMA:9165") "first thoracic vertebra") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004626") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "thoracic vertebra 1") SubClassOf( ) # Class: (thoracic vertebra 2) AnnotationAssertion(Annotation( ) Annotation( "ncithesaurus:T2_Vertebra") "The second thoracic vertebra counting from the top down. Note that members of this class are not necessarily homologous[ncit,modified].") AnnotationAssertion( "elements are to be defined spatially/topologically") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:19543") AnnotationAssertion( "FMA:9187") AnnotationAssertion( "MA:0001439") AnnotationAssertion( "NCIT:C33724") AnnotationAssertion(Annotation( "ncithesaurus:T2_Vertebra") "UMLS:C0459936") AnnotationAssertion(Annotation( "FMA:9187") "T2 vertebra") AnnotationAssertion(Annotation( "FMA:9187") "second dorsal vertebra") AnnotationAssertion(Annotation( "FMA:9187") "second thoracic vertebra") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004627") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "thoracic vertebra 2") SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (thoracic vertebra 3) AnnotationAssertion(Annotation( ) Annotation( "ncithesaurus:T3_Vertebra") "The third thoracic vertebra counting from the top down. Note that members of this class are not necessarily homologous[ncit,modified].") AnnotationAssertion( "elements are to be defined spatially/topologically") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:19544") AnnotationAssertion( "FMA:9209") AnnotationAssertion( "MA:0001440") AnnotationAssertion( "NCIT:C33725") AnnotationAssertion(Annotation( "ncithesaurus:T3_Vertebra") "UMLS:C0459952") AnnotationAssertion(Annotation( "FMA:9209") "T3 vertebra") AnnotationAssertion(Annotation( "FMA:9209") "third dorsal vertebra") AnnotationAssertion(Annotation( "FMA:9209") "third thoracic vertebra") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004628") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "thoracic vertebra 3") SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (thoracic vertebra 4) AnnotationAssertion(Annotation( ) Annotation( "ncithesaurus:T4_Vertebra") "The fourth thoracic vertebra counting from the top down. Note that members of this class are not necessarily homologous[ncit,modified].") AnnotationAssertion( "elements are to be defined spatially/topologically") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:19545") AnnotationAssertion( "FMA:9248") AnnotationAssertion( "MA:0001441") AnnotationAssertion( "NCIT:C33726") AnnotationAssertion(Annotation( "ncithesaurus:T4_Vertebra") "UMLS:C0459951") AnnotationAssertion(Annotation( "FMA:9248") "T4 vertebra") AnnotationAssertion(Annotation( "FMA:9248") "fourth dorsal vertebra") AnnotationAssertion(Annotation( "FMA:9248") "fourth thoracic vertebra") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004629") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "thoracic vertebra 4") SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (thoracic vertebra 5) AnnotationAssertion(Annotation( ) Annotation( "ncithesaurus:T5_Vertebra") "The fifth thoracic vertebra counting from the top down. Note that members of this class are not necessarily homologous[ncit,modified].") AnnotationAssertion( "elements are to be defined spatially/topologically") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:19546") AnnotationAssertion( "FMA:9922") AnnotationAssertion( "MA:0001442") AnnotationAssertion( "NCIT:C33727") AnnotationAssertion(Annotation( "ncithesaurus:T5_Vertebra") "UMLS:C0459950") AnnotationAssertion(Annotation( "FMA:9922") "T5 vertebra") AnnotationAssertion(Annotation( "FMA:9922") "fifth dorsal vertebra") AnnotationAssertion(Annotation( "FMA:9922") "fifth thoracic vertebra") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004630") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "thoracic vertebra 5") SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (thoracic vertebra 6) AnnotationAssertion(Annotation( ) Annotation( "ncithesaurus:T6_Vertebra") "The sixth thoracic vertebra counting from the top down. Note that members of this class are not necessarily homologous[ncit,modified].") AnnotationAssertion( "elements are to be defined spatially/topologically") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:19547") AnnotationAssertion( "FMA:9945") AnnotationAssertion( "MA:0001443") AnnotationAssertion( "NCIT:C33728") AnnotationAssertion(Annotation( "ncithesaurus:T6_Vertebra") "UMLS:C0459949") AnnotationAssertion(Annotation( "FMA:9945") "T6 vertebra") AnnotationAssertion(Annotation( "FMA:9945") "sixth dorsal vertebra") AnnotationAssertion(Annotation( "FMA:9945") "sixth thoracic vertebra") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004631") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "thoracic vertebra 6") SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (thoracic vertebra 7) AnnotationAssertion(Annotation( ) Annotation( "ncithesaurus:T7_Vertebra") "The seventh thoracic vertebra counting from the top down. Note that members of this class are not necessarily homologous[ncit,modified].") AnnotationAssertion( "elements are to be defined spatially/topologically") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:19548") AnnotationAssertion( "FMA:9968") AnnotationAssertion( "MA:0001444") AnnotationAssertion( "NCIT:C33729") AnnotationAssertion(Annotation( "ncithesaurus:T7_Vertebra") "UMLS:C0459947") AnnotationAssertion(Annotation( "FMA:9968") "T7 vertebra") AnnotationAssertion(Annotation( "FMA:9968") "seventh dorsal vertebra") AnnotationAssertion(Annotation( "FMA:9968") "seventh thoracic vertebra") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004632") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "thoracic vertebra 7") SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (thoracic vertebra 9) AnnotationAssertion(Annotation( ) Annotation( "ncithesaurus:T9_Vertebra") "The ninth thoracic vertebra counting from the top down. Note that members of this class are not necessarily homologous[ncit,modified].") AnnotationAssertion( "elements are to be defined spatially/topologically") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:19550") AnnotationAssertion( "FMA:10014") AnnotationAssertion( "MA:0001446") AnnotationAssertion( "NCIT:C33731") AnnotationAssertion(Annotation( "ncithesaurus:T9_Vertebra") "UMLS:C0459954") AnnotationAssertion(Annotation( "FMA:10014") "Ninth dorsal vertebra") AnnotationAssertion(Annotation( "FMA:10014") "T9 vertebra") AnnotationAssertion(Annotation( "FMA:10014") "ninth thoracic vertebra") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004633") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "thoracic vertebra 9") SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (thoracic vertebra 10) AnnotationAssertion(Annotation( ) Annotation( "ncithesaurus:T10_Vertebra") "The tenth thoracic vertebra counting from the top down. Note that members of this class are not necessarily homologous[ncit,modified].") AnnotationAssertion( "elements are to be defined spatially/topologically") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:19551") AnnotationAssertion( "FMA:10037") AnnotationAssertion( "MA:0001447") AnnotationAssertion( "NCIT:C33721") AnnotationAssertion(Annotation( "ncithesaurus:T10_Vertebra") "UMLS:C0459955") AnnotationAssertion(Annotation( "FMA:10037") "T10 vertebra") AnnotationAssertion(Annotation( "FMA:10037") "tenth dorsal vertebra") AnnotationAssertion(Annotation( "FMA:10037") "tenth thoracic vertebra") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004634") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "thoracic vertebra 10") SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (thoracic vertebra 11) AnnotationAssertion(Annotation( ) Annotation( "ncithesaurus:T11_Vertebra") "The eleventh thoracic vertebra counting from the top down. Note that members of this class are not necessarily homologous[ncit,modified].") AnnotationAssertion( "elements are to be defined spatially/topologically") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:19552") AnnotationAssertion( "FMA:10059") AnnotationAssertion( "MA:0001448") AnnotationAssertion( "NCIT:C33722") AnnotationAssertion(Annotation( "ncithesaurus:T11_Vertebra") "UMLS:C0459956") AnnotationAssertion(Annotation( "FMA:10059") "T11 vertebra") AnnotationAssertion(Annotation( "FMA:10059") "eleventh dorsal vertebra") AnnotationAssertion(Annotation( "FMA:10059") "eleventh thoracic vertebra") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004635") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "thoracic vertebra 11") SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (thoracic vertebra 12) AnnotationAssertion(Annotation( ) Annotation( "ncithesaurus:T12_Vertebra") "The twelfth thoracic vertebra counting from the top down. Note that members of this class are not necessarily homologous[ncit,modified].") AnnotationAssertion( "elements are to be defined spatially/topologically") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:19553") AnnotationAssertion( "FMA:10081") AnnotationAssertion( "MA:0001449") AnnotationAssertion( "NCIT:C33723") AnnotationAssertion(Annotation( "ncithesaurus:T12_Vertebra") "UMLS:C0459957") AnnotationAssertion(Annotation( "FMA:10081") "T12 vertebra") AnnotationAssertion(Annotation( "FMA:10081") "twelfth dorsal vertebra") AnnotationAssertion(Annotation( "FMA:10081") "twelfth thoracic vertebra") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004636") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "thoracic vertebra 12") SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (otic capsule) AnnotationAssertion(Annotation( ) "The capsule surrounding the inner ear mechanism.") AnnotationAssertion( "developmental relationships need to be checked") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0010143") Annotation( "AAO"^^xsd:string) Annotation( "AAO:EJS"^^xsd:string) "Skeletal elements surrounding the membranous labyrinth of the inner ear. Sensory capsules anterolateral to and confluent with occipital arch.[AAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000854") Annotation( "VHOG"^^xsd:string) Annotation( ) "The cartilage capsule surrounding the inner ear mechanism; in the embryos of higher vertebrates, it is cartilaginous at first but later becomes bony. [Biology_online][VHOG]") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0010143") Annotation( "AAO"^^xsd:string) "relationship loss: part_of occipito-petrosal (AAO:0010831)[AAO]") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0010143") Annotation( "AAO"^^xsd:string) "relationship loss: part_of otic and occipital (AAO:0000993)[AAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000854") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0030223693 Liem KF, Bemis WE, Walker WF, Grande L, Functional Anatomy of the Vertebrates: An Evolutionary Perspective (2001) p.235, DOI:10.1016/S0378-5955(00)00168-4 Fay RR, Popper AN, Evolution of hearing in vertebrates: the inner ears and processing. Hearing research (2000)") "Otic capsules develop around the parts of the ear that lie within the chondrocranium. This part of the ear, known as the inner ear, is composed of the semicircular ducts and associated sacs that contain the receptive cells for equilibrium and hearing (reference 1); (...) considerations have led to our rethinking issues related to the origin of several aspects of vertebrate hearing, and to the view that many basic auditory functions evolved very early in vertebrate history, and that the functions observed in more `advanced' vertebrates, such as birds and mammals, are frequently modifications of themes first encountered in fishes, and perhaps even more ancestral animals.[well established][VHOG]") AnnotationAssertion(Annotation( "Biology-Online") "in elasmobranchs, it remains cartilaginous in the adult; in the embryos of higher vertebrates, it is cartilaginous at first but later becomes bony (at approximately 23 weeks in humans)") AnnotationAssertion(Annotation( ) "otic capsule skeletal element") AnnotationAssertion( ) AnnotationAssertion( "AAO:0010143") AnnotationAssertion( "VHOG:0000854") AnnotationAssertion(Annotation( "ZFA:0001500") "otic capsule") AnnotationAssertion(Annotation( ) "otic capsule element") AnnotationAssertion(Annotation( ) "otic capsule endochondral element") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "VHOG:0000854") "auditory capsule") AnnotationAssertion( "otic region") AnnotationAssertion( "periotic") AnnotationAssertion(Annotation( "VHOG:0000854") "periotic capsule") AnnotationAssertion( "UBERON:0004637") AnnotationAssertion(rdfs:label "otic capsule") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (blood vessel endothelium) AnnotationAssertion(Annotation( ) "An endothelium that lines the blood vasculature. Other endothelia may line lymph vessels, the heart.") AnnotationAssertion( ) AnnotationAssertion( "BTO:0000766") AnnotationAssertion( "CALOHA:TS-2155") AnnotationAssertion( "EMAPA:35176") AnnotationAssertion( "MA:0000709") AnnotationAssertion( "NCIT:C53395") AnnotationAssertion( "TAO:0005257") AnnotationAssertion(Annotation( "ncithesaurus:Blood_Vessel_Endothelium") "UMLS:C1706972") AnnotationAssertion( "ZFA:0005257") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004638") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "blood vessel endothelium") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (renal afferent arteriole) AnnotationAssertion(Annotation( "ISBN:0-683-40008-8"^^xsd:string) Annotation( "MGI:csmith"^^xsd:string) Annotation( "MP:0011312") "The blood vessels that branch from the kidney interlobular artery, convey blood to the glomerular capillaries, and play an important role in the regulation of blood pressure as a part of the tubuloglomerular feedback mechanism.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:28230") AnnotationAssertion( "EMAPA:28266") AnnotationAssertion( "FMA:77042") AnnotationAssertion( "MA:0002579") AnnotationAssertion( "TAO:0002139") AnnotationAssertion( "ZFA:0005307") AnnotationAssertion(Annotation( "MA:0002579") "afferent arteriole") AnnotationAssertion(Annotation( "ZFA:0005307") "afferent glomerular arteriole") AnnotationAssertion(Annotation( "FMA:77042") "afferent glomerular arteriole of kidney") AnnotationAssertion(Annotation( "FMA:77042") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "arteriola glomerularis afferens renis") AnnotationAssertion(Annotation( "MP:0011312") "kidney afferent arteriole") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "arteriola glomerularis afferens") AnnotationAssertion( "UBERON:0004639") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "renal afferent arteriole") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/0/02/Gray1128.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (renal efferent arteriole) AnnotationAssertion(Annotation( "ISBN:0-683-40008-8"^^xsd:string) Annotation( "MGI:csmith"^^xsd:string) Annotation( "MP:0011313") "The blood vessels that convey blood from the glomerulocapillary network to the capillary bed of the proximal convoluted tubule.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:28233") AnnotationAssertion( "EMAPA:28275") AnnotationAssertion( "FMA:77043") AnnotationAssertion( "MA:0002585") AnnotationAssertion( "TAO:0002140") AnnotationAssertion( "ZFA:0005308") AnnotationAssertion(Annotation( "FMA:77043") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "arteriola glomerularis efferens renis") AnnotationAssertion(Annotation( "MA:0002585") "efferent arteriole") AnnotationAssertion(Annotation( "ZFA:0005308") "efferent glomerular arteriole") AnnotationAssertion(Annotation( "FMA:77043") "efferent glomerular arteriole of kidney") AnnotationAssertion(Annotation( "MP:0011313") "kidney efferent arteriole") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "arteriola glomerularis efferens capsulae renalis") AnnotationAssertion( "UBERON:0004640") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "renal efferent arteriole") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/0/02/Gray1128.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (spleen capsule) AnnotationAssertion(Annotation( "MGI:cwg"^^xsd:string) Annotation( "MP:0002227") "The connective tissue that surrounds the spleen.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:35802") AnnotationAssertion( "FMA:15849") AnnotationAssertion( "MA:0000753") AnnotationAssertion( "NCIT:C33598") AnnotationAssertion(Annotation( "ncithesaurus:Splenic_Capsule") "UMLS:C0229681") AnnotationAssertion(Annotation( "FMA:15849") "Malpighian capsule") AnnotationAssertion(Annotation( "FMA:15849") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "capsula splenica") AnnotationAssertion(Annotation( "FMA:15849") "capsule of spleen") AnnotationAssertion(Annotation( "FMA:15849") "fibroelastic coat of spleen") AnnotationAssertion(Annotation( "FMA:15849") "fibrous capsule of spleen") AnnotationAssertion(Annotation( "FMA:15849") "splenic capsule") AnnotationAssertion(Annotation( "FMA:15849") "tunica fibrosa (splen)(lien)") AnnotationAssertion(Annotation( "FMA:15849") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "tunica fibrosa splenica") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004641") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "spleen capsule") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (third ventricle ependyma) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An ependyma that is part of a third ventricle [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:35100") AnnotationAssertion( "FMA:242833") AnnotationAssertion( "MA:0000882") AnnotationAssertion(Annotation( "MA:0000882") "3rd ventricle ependyma") AnnotationAssertion(Annotation( "MA:0000882") "ependyma of third ventricle") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004642") AnnotationAssertion(rdfs:label "third ventricle ependyma") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lateral ventricle ependyma) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An ependyma that is part of a lateral ventricle [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:35488") AnnotationAssertion( "FMA:242825") AnnotationAssertion( "MA:0000964") AnnotationAssertion( "NCIT:C49249") AnnotationAssertion(Annotation( "ncithesaurus:Lateral_Ventricle_Ependyma") "UMLS:C0228162") AnnotationAssertion(Annotation( "FMA:242825") "ependyma of lateral ventricle") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004643") AnnotationAssertion(rdfs:label "lateral ventricle ependyma") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (fourth ventricle ependyma) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An ependyma that is part of a fourth ventricle [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:35355") AnnotationAssertion( "FMA:242835") AnnotationAssertion( "MA:0000986") AnnotationAssertion( "NCIT:C49232") AnnotationAssertion(Annotation( "ncithesaurus:Fourth_Ventricle_Ependyma") "UMLS:C0228171") AnnotationAssertion(Annotation( "FMA:242835") "ependyma of fourth ventricle") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "MA:0000986") "4th ventricle ependyma") AnnotationAssertion( "UBERON:0004644") AnnotationAssertion(rdfs:label "fourth ventricle ependyma") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (urinary bladder urothelium) AnnotationAssertion(Annotation( "MP:0000540") "The epithelial lining of the luminal space of the urinary bladder.") AnnotationAssertion( "5-7 cell layers thick in contracted bladder, 2-3 cells thick in distended bladder; lines renal pelvis, ureters, bladder, most of urethra but not distal urethra") AnnotationAssertion(Annotation( "BTO:0001245") "urothelium") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0001694") AnnotationAssertion( "CALOHA:TS-1088") AnnotationAssertion( "EMAPA:28601") AnnotationAssertion( "FMA:15936") AnnotationAssertion( "MA:0001693") AnnotationAssertion( "NCIT:C13318") AnnotationAssertion(Annotation( "ncithesaurus:Transitional_Epithelium") "UMLS:C0225339") AnnotationAssertion(Annotation( "FMA:15936") "bladder transitional cell epithelium") AnnotationAssertion(Annotation( "FMA:15936") "transitional epithelium of urinary bladder") AnnotationAssertion(Annotation( "FMA:15936") "urinary bladder transitional epithelium") AnnotationAssertion(Annotation( "FMA:15936") "urothelium of urinary bladder") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "EMAPA:28601") "epithelium of bladder") AnnotationAssertion(Annotation( "MA:0001693") "transitional epithelium") AnnotationAssertion( "UBERON:0004645") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "urinary bladder urothelium") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (infraorbital artery) AnnotationAssertion(Annotation( ) "The infraorbital artery is an artery in the head that runs in the maxilla, emerging through the infraorbital foramen, just under the orbit of the eye. [WP,unvetted].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37090") AnnotationAssertion( "FMA:49767") AnnotationAssertion( "MA:0001977") AnnotationAssertion( "NCIT:C52940") AnnotationAssertion(Annotation( "ncithesaurus:Infraorbital_Artery") "UMLS:C0226153") AnnotationAssertion(Annotation( "FMA:49767") "infra-orbital artery") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "a. infraorbitalis") AnnotationAssertion( "UBERON:0004646") AnnotationAssertion(rdfs:label "infraorbital artery") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/a/aa/Gray511.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (liver lobule) AnnotationAssertion(Annotation( "ISBN:0-683-40008-8"^^xsd:string) Annotation( "MP:0008987") "The polygonal structure of the liver that consists of hepatocytes radiating outward from a hepatic vein.") AnnotationAssertion( "should not be confused with the anatomic lobes of the liver (caudate lobe, quadrate lobe, left lobe, and right lobe), or any of the functional lobe classification systems.[WP]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:35499") AnnotationAssertion( "FMA:14471") AnnotationAssertion( "MA:0002494") AnnotationAssertion( "NCIT:C32732") AnnotationAssertion(Annotation( "ncithesaurus:Hepatic_Lobule") "UMLS:C0227518") AnnotationAssertion(Annotation( "FMA:14471") "hepatic lobule") AnnotationAssertion(Annotation( ) "lobuli hepatici") AnnotationAssertion(Annotation( "FMA:14471") Annotation( ) "lobulus hepaticus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "lobules of liver") AnnotationAssertion(Annotation( ) Annotation( ) "lobuli hepatis") AnnotationAssertion( "UBERON:0004647") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "liver lobule") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) Annotation( "MA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (esophagus muscularis mucosa) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A muscularis mucosa that is part of a esophagus.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:26989") AnnotationAssertion( "FMA:63059") AnnotationAssertion( "MA:0002681") AnnotationAssertion( "NCIT:C32540") AnnotationAssertion(Annotation( "ncithesaurus:Esophageal_Muscularis_Mucosa") "UMLS:C0227177") AnnotationAssertion( "esophagus muscularis mucosae") AnnotationAssertion(Annotation( "FMA:63059") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "lamina muscularis mucosae (oesphagus)") AnnotationAssertion(Annotation( "FMA:63059") "lamina muscularis of esophageal mucous membrane") AnnotationAssertion(Annotation( "FMA:63059") "muscularis mucosae of esophagus") AnnotationAssertion( "uberon") AnnotationAssertion( "esophagus muscularis") AnnotationAssertion( "UBERON:0004648") AnnotationAssertion(rdfs:label "esophagus muscularis mucosa") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (sphenoid bone pterygoid process) AnnotationAssertion(Annotation( "ISBN:0-683-40008-8"^^xsd:string) Annotation( "MP:0004452") "The process projecting downward from either side of the sphenoid bone, in vertebrates divided into two plates, an inner and an outer (sometimes called the lateral and medial); the posterior nares pass through the space, called the pterygoid fossa, between the processes.") AnnotationAssertion( "TODO - check AAO:0000521-pterygoid and MA:0001471-pterygoid bone. MA also has 'inner plate of pterygoid process' as a syn for MA:0001471, FMA has lateral/medial plates. Seems likely inner = lateral (see MP:0004452).") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0010086") Annotation( "AAO"^^xsd:string) Annotation( "AAO:EJS"^^xsd:string) "Process that projects from posterior margin of commissure into subocular space.[AAO]") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0010086") Annotation( "AAO"^^xsd:string) "relationship loss: part_of anterior quadratocranial commissure (AAO:0010061)[AAO]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010086") AnnotationAssertion( "FMA:54682") AnnotationAssertion( "MA:0002774") AnnotationAssertion(Annotation( "FMA:54682") "processus pterygoideus") AnnotationAssertion(Annotation( "FMA:54682") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "processus pterygoideus ossis sphenoidalis") AnnotationAssertion(Annotation( "FMA:54682") "pterygoid process") AnnotationAssertion(Annotation( "FMA:54682") "pterygoid process of sphenoid") AnnotationAssertion(Annotation( "FMA:54682") "pterygoid process of sphenoid bone") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "processus pterygoideus ossis sphenoidalis") AnnotationAssertion(Annotation( ) "pterygoid plate") AnnotationAssertion(Annotation( ) "pterygoid process") AnnotationAssertion(Annotation( "MA:0002774") "pterygoid process of sphenoid bone") AnnotationAssertion(Annotation( ) "pterygoid processes") AnnotationAssertion(Annotation( ) "pterygoid processus") AnnotationAssertion( "UBERON:0004649") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "sphenoid bone pterygoid process") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/3/35/Gray145.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA-abduced-lr"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (tongue keratinized epithelium) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A keratinized stratified squamous epithelium that is part of a tongue.") AnnotationAssertion( "FMA:74865") AnnotationAssertion( "MA:0002787") AnnotationAssertion(Annotation( "FMA:74865") "keratinized epithelium of tongue") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004650") AnnotationAssertion(rdfs:label "tongue keratinized epithelium") SubClassOf( ) SubClassOf( ) # Class: (scapula spine) AnnotationAssertion(Annotation( "ISBN:0-683-40008-8"^^xsd:string) Annotation( "MP:0004347") "The triangular ridge on the dorsal aspect of the scapula which separates the supra- from the infraspinatous fossa and where the trapezius and deltoid muscles are attached.") AnnotationAssertion(Annotation( "UBERON:0004741") Annotation( "PMC1352163") Annotation( "not_accepted") "homology debated") AnnotationAssertion(Annotation( "UBERON:0004741") Annotation( "PMC1352163") Annotation( "not_accepted") "the cleithrum, the major shoulder bone of extinct land vertebrate ancestors,.. appears to survive as the scapular spine in living mammals[Matsuoka, PMC1352163]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:25123") AnnotationAssertion( "FMA:13453") AnnotationAssertion( "MA:0002806") AnnotationAssertion(Annotation( "FMA:13453") "spine of scapula") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:13453") Annotation( "MA:0002806") "scapular spine") AnnotationAssertion(Annotation( ) Annotation( ) "spina scapulae") AnnotationAssertion( "UBERON:0004651") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "scapula spine") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/a/a6/Gray205_left_scapula_lateral_view.png"^^xsd:anyURI) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (humerus diaphysis) AnnotationAssertion(Annotation( ) "The body or shaft of the humerus is almost cylindrical in the upper half of its extent, prismatic and flattened below, and has three borders and three surfaces.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:25051") AnnotationAssertion( "FMA:13305") AnnotationAssertion( "MA:0002807") AnnotationAssertion( "NCIT:C120671") AnnotationAssertion(Annotation( "FMA:13305") "body of humerus") AnnotationAssertion(Annotation( "FMA:13305") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "corpus humeri") AnnotationAssertion(Annotation( "FMA:13305") "diaphysis of humerus") AnnotationAssertion(Annotation( "FMA:13305") "humeral diaphysis") AnnotationAssertion(Annotation( "FMA:13305") "shaft of humerus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "body of the humerus") AnnotationAssertion(Annotation( ) "medial humerus") AnnotationAssertion(Annotation( ) "shaft of the humerus") AnnotationAssertion( "UBERON:0004652") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "humerus diaphysis") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (temporal process of zygomatic bone) AnnotationAssertion(Annotation( ) "The temporal process of the zygomatic bone, directed backward and medialward, is concave, presenting medially a rough, triangular area, for articulation with the maxilla, and laterally a smooth, concave surface, the upper part of which forms the anterior boundary of the temporal fossa, the lower a part of the infratemporal fossa. Near the center of this surface is the zygomaticotemporal foramen for the transmission of the zygomaticotemporal nerve.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37807") AnnotationAssertion( "FMA:52904") AnnotationAssertion( "MA:0002812") AnnotationAssertion(Annotation( ) Annotation( ) "facies temporalis ossis zygomatici") AnnotationAssertion(Annotation( "FMA:52904") "processus temporalis (os zygomaticum)") AnnotationAssertion(Annotation( "FMA:52904") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "processus temporalis ossis zygomatici") AnnotationAssertion(Annotation( "MA:0002812") "zygomatic bone temporal process") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004654") AnnotationAssertion(rdfs:label "temporal process of zygomatic bone") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/d/da/Gray166.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "MA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "MA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (zygomatic process of temporal bone) AnnotationAssertion(Annotation( ) "The zygomatic process of the temporal bone is a long, arched process projecting from the lower part of the squamous portion of the temporal bone. It articulates with the zygomatic bone. This process is at first directed lateralward, its two surfaces looking upward and downward; it then appears as if twisted inward upon itself, and runs forward, its surfaces now looking medialward and lateralward.") AnnotationAssertion( "UBERON:0004653") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:19015") AnnotationAssertion( "FMA:52886") AnnotationAssertion( "MA:0002811") AnnotationAssertion(Annotation( "FMA:52886") "processus zygomaticus") AnnotationAssertion(Annotation( ) Annotation( ) "processus zygomaticus ossis temporalis") AnnotationAssertion(Annotation( "MA:0002811") "temporal bone zygomatic process") AnnotationAssertion(Annotation( "FMA:52886") "temporal zygomatic process") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:52886") "zygomatic appendage of temporal bone") AnnotationAssertion( "UBERON:0004655") AnnotationAssertion(rdfs:label "zygomatic process of temporal bone") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/9/96/Gray137.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "MA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "MA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (mandible condylar process) AnnotationAssertion(Annotation( "MFMO:0000056") "Articular part of the mandible bone.") AnnotationAssertion( ) AnnotationAssertion( "BTO:0001750") AnnotationAssertion( "EMAPA:36572") AnnotationAssertion( "FMA:52836") AnnotationAssertion( "GAID:219") AnnotationAssertion( "MA:0002816") AnnotationAssertion( "MESH:D008335") AnnotationAssertion( "MFMO:0000056") AnnotationAssertion(Annotation( "FMA:52836") "condylar process of mandible") AnnotationAssertion(Annotation( "MFMO:0000056") "condyle of the mandible") AnnotationAssertion(Annotation( "BTO:0001750") "mandibular condyle") AnnotationAssertion(Annotation( "FMA:52836") "processus condylaris") AnnotationAssertion(Annotation( "FMA:52836") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "processus condylaris mandibulae") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "condyle of mandible") AnnotationAssertion(Annotation( ) "condyle of the mandible") AnnotationAssertion(Annotation( ) "condyloid process") AnnotationAssertion(Annotation( "MA:0002816") "mandibular condyloid process") AnnotationAssertion( "UBERON:0004657") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "mandible condylar process") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/b/b1/Processuscondylarismandibulae.PNG"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (mandible head) AnnotationAssertion( ) AnnotationAssertion( "FMA:59331") AnnotationAssertion( "MA:0002817") AnnotationAssertion(Annotation( "FMA:59331") "head of mandible") AnnotationAssertion(Annotation( "FMA:59331") "mandibular head") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004658") AnnotationAssertion(rdfs:label "mandible head") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (mandible neck) AnnotationAssertion( ) AnnotationAssertion( "FMA:59332") AnnotationAssertion( "MA:0002818") AnnotationAssertion(Annotation( "FMA:59332") "mandibular neck") AnnotationAssertion(Annotation( "FMA:59332") "neck of mandible") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004659") AnnotationAssertion(rdfs:label "mandible neck") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (mandible coronoid process) AnnotationAssertion(Annotation( ) Annotation( ) "A dorsal process on the lower jaw associated with muscle attachment. It may be formed by a separate coronoid bone or as a process of the dentary. In most living (and many extinct) mammals, the most dorsal of the three proximal processes of the jaw.") AnnotationAssertion(Annotation( "TAO") "TAO:0001673 coronoid process, a bony projection on dentary") AnnotationAssertion(Annotation( "AAO:0000103") "coronoid") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:52833") AnnotationAssertion( "MA:0002819") AnnotationAssertion(Annotation( "FMA:52833") "coronoid process of mandible") AnnotationAssertion(Annotation( "FMA:52833") "processus coronoideus (mandibula)") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "MA:0002819") "mandibular coronoid process") AnnotationAssertion(Annotation( ) Annotation( ) "processus coronoideus mandibulae") AnnotationAssertion( "UBERON:0004660") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "mandible coronoid process") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/7/74/Processuscoronoideusmandibulae.PNG"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (mandible temporal crest) AnnotationAssertion( "FMA:59484") AnnotationAssertion( "MA:0002820") AnnotationAssertion(Annotation( "FMA:59484") "crista temporalis (mandibulae)") AnnotationAssertion(Annotation( "FMA:59484") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "crista temporalis mandibulae") AnnotationAssertion(Annotation( "FMA:59484") "temporal crest of mandible") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:59484") "mandibular temporal crest") AnnotationAssertion( "UBERON:0004661") AnnotationAssertion(rdfs:label "mandible temporal crest") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses( ) # Class: (vertebra lamina) AnnotationAssertion(Annotation( "ISBN:0-683-40008-8"^^xsd:string) Annotation( "MGI:csmith"^^xsd:string) Annotation( "MP:0004605") "Two broad plates directed dorsomedially from the pedicles; these fuse at the dorsal midline, and complete the dorsal wall of the vertebral foramen.") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0000695") Annotation( "AAO"^^xsd:string) Annotation( "AAO:Pugener_and_Maglia_2008") "Paired plates that form the neural arch. The lateral margin of each lamina rests dorsal to the superior end of the pedicel, and the medial end fuses to the medial end of the opposite lamina.[AAO]") AnnotationAssertion( ) AnnotationAssertion( "AAO:0000695") AnnotationAssertion( "FMA:11951") AnnotationAssertion( "MA:0002876") AnnotationAssertion(Annotation( "FMA:11951") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "lamina arcus vertebrae") AnnotationAssertion(Annotation( "FMA:11951") "lamina of vertebra") AnnotationAssertion(Annotation( "FMA:11951") "lamina of vertebral arch") AnnotationAssertion(Annotation( "AAO:0000695") "neural arch lamina") AnnotationAssertion(Annotation( "FMA:11951") "vertebral lamina") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "MA:0002876") "vertebral lamina") AnnotationAssertion( "UBERON:0004662") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "vertebra lamina") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (aorta wall) AnnotationAssertion(Annotation( ) "An anatomical wall that is part of an aorta, enclosing the luminal space.") AnnotationAssertion( "EMAPA:35139") AnnotationAssertion( "FMA:14156") AnnotationAssertion( "MA:0002901") AnnotationAssertion(Annotation( "FMA:14156") "aortic wall") AnnotationAssertion(Annotation( "FMA:14156") "wall of aorta") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004663") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "aorta wall") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (aorta tunica adventitia) AnnotationAssertion(Annotation( "ISBN:0-683-40008-8"^^xsd:string) Annotation( "MP:0009871") "The outermost layer of the aorta wall, containing connective tissue and collagen and elastic fibers.") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:35136") AnnotationAssertion( "FMA:14283") AnnotationAssertion( "MA:0002902") AnnotationAssertion(Annotation( "FMA:14283") "tunica adventitia of aorta") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004664") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "aorta tunica adventitia") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (muscular coat of seminal vesicle) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A muscular coat that is part of a seminal vesicle [Automatically generated definition].") AnnotationAssertion( "EMAPA:29773") AnnotationAssertion( "FMA:19404") AnnotationAssertion( "MA:0002913") AnnotationAssertion(Annotation( "FMA:19404") "muscle layer of seminal vesicle") AnnotationAssertion(Annotation( "FMA:19404") "muscular coat of seminal gland") AnnotationAssertion(Annotation( "FMA:19404") "muscular layer of seminal gland") AnnotationAssertion(Annotation( "FMA:19404") "tunica muscularis (vesicula seminalis)") AnnotationAssertion(Annotation( "FMA:19404") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "tunica muscularis glandulae vesiculosae") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004665") AnnotationAssertion(rdfs:label "muscular coat of seminal vesicle") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (interventricular septum membranous part) AnnotationAssertion(Annotation( "MP:0008823") "The membranous portion of the wall between the two lower chambers of the heart.") AnnotationAssertion(Annotation( "GO:0003149") "The membranous septum is the upper part of ventricular septum[GO:0003149].") AnnotationAssertion( "UBERON:0004143") AnnotationAssertion(Annotation( "GO:0003149") "membranous septum") AnnotationAssertion(Annotation( "VT:0000018") "ventricle membranous septum") AnnotationAssertion(Annotation( "MP:0008823") "ventricular membranous septum") AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0004596") AnnotationAssertion( "EMAPA:18246") AnnotationAssertion( "FMA:7135") AnnotationAssertion( "MA:0002939") AnnotationAssertion( "VHOG:0000927") AnnotationAssertion(Annotation( ) "cardiac ventricular membranous septum") AnnotationAssertion(Annotation( "FMA:7135") "membranous interventricular septum") AnnotationAssertion(Annotation( "VHOG:0000927") "membranous part interventricular septum") AnnotationAssertion(Annotation( "FMA:7135") "membranous part of interventricular septum") AnnotationAssertion(Annotation( "FMA:7135") "membranous portion of interventricular septum") AnnotationAssertion(Annotation( "FMA:7135") "pars membranacea (septi interventricularis)") AnnotationAssertion(Annotation( "FMA:7135") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "pars membranacea septi interventricularis") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "MA:0002939") "membranous interventricular septum") AnnotationAssertion( "UBERON:0004666") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "interventricular septum membranous part") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "Wikipedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (interventricular septum muscular part) AnnotationAssertion(Annotation( ) Annotation( ) "The muscular portion of the wall between the two lower chambers of the heart.") AnnotationAssertion(Annotation( "GO:0003150") "The muscular septum is the lower part of the ventricular septum[GO]") AnnotationAssertion( "UBERON:0004144") AnnotationAssertion(Annotation( "GO:0003150") "muscular septum") AnnotationAssertion( "EHDAA2:0000885") AnnotationAssertion( "EHDAA:2607") AnnotationAssertion( "EMAPA:18247") AnnotationAssertion( "FMA:7134") AnnotationAssertion( "MA:0002940") AnnotationAssertion( "RETIRED_EHDAA2:0000888") AnnotationAssertion(Annotation( ) "cardiac ventricular muscular septum") AnnotationAssertion(Annotation( "FMA:7134") "muscular interventricular septum") AnnotationAssertion( "muscular part interventricular septum") AnnotationAssertion(Annotation( "FMA:7134") "muscular part of interventricular septum") AnnotationAssertion(Annotation( "FMA:7134") "pars muscularis (septi interventricularis)") AnnotationAssertion(Annotation( "FMA:7134") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "pars muscularis septi interventricularis") AnnotationAssertion(Annotation( ) "septum membranaceum") AnnotationAssertion( "ventricular muscular septum") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "MA:0002940") "muscular interventricular septum") AnnotationAssertion( "UBERON:0004667") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "interventricular septum muscular part") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (fourth ventricle aperture) AnnotationAssertion(Annotation( ) "One of: the 4th ventricle median or lateral apertures.") AnnotationAssertion( "FMA:242766") AnnotationAssertion( "MA:0002945") AnnotationAssertion( "aperture of 4th ventricle") AnnotationAssertion(Annotation( "FMA:242766") "aperture of fourth ventricle") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004668") AnnotationAssertion(rdfs:label "fourth ventricle aperture") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (ependyma) AnnotationAssertion(Annotation( ) Annotation( ) Annotation( "ISBN:0387949542") "The thin epithelium-like membrane composed of ependymal cells that lines the ventricular system of the brain and the spinal cord.") AnnotationAssertion( "ependymal") AnnotationAssertion( "unlike other epithelia, there is no basement membrane under the ependymal epithelium[ISBN:0387949542]") AnnotationAssertion(Annotation( "FMA"^^xsd:string) "FMA breaks ependyma into ependyma proper (a subdivsion of epithelium) and epithelium of choroid plexus") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0000401") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37865") AnnotationAssertion( "FMA:242791") AnnotationAssertion( "GAID:608") AnnotationAssertion( "MESH:D004805") AnnotationAssertion( "NCIT:C13078") AnnotationAssertion(Annotation( "ncithesaurus:Ependyma") "UMLS:C0014472") AnnotationAssertion(Annotation( "FMA:242791") "ependyma of neuraxis") AnnotationAssertion(Annotation( "BTO:0000401") "ependymal epithelium") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:242791") "lamina epithelialis") AnnotationAssertion( "UBERON:0004670") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "ependyma") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/b/b6/Gray667.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (gyrus rectus) AnnotationAssertion(Annotation( ) "The portion of the frontal lobe medial to the medial orbital gyrus is named the gyrus rectus (or straight gyrus), and is continuous with the superior frontal gyrus on the medial surface. A specific function for the gyrus rectus has not yet been elucidated.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:GRe") AnnotationAssertion( "BIRNLEX:1103") AnnotationAssertion( "FMA:61893") AnnotationAssertion( "HBA:4047") AnnotationAssertion(Annotation( "BIRNLEX:1103") "UMLS:C0152300") AnnotationAssertion(Annotation( "BIRNLEX:1103") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=94") AnnotationAssertion(Annotation( "BIRNLEX:1103") "gyrus rectus") AnnotationAssertion(Annotation( "FMA:61893") "medial part of gyri orbitales") AnnotationAssertion(Annotation( "FMA:61893") "rectal gyrus") AnnotationAssertion(Annotation( "FMA:61893") "rectus gyrus") AnnotationAssertion(Annotation( "FMA:61893") "straight gyrus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:94") "ventromedial gyrus") AnnotationAssertion( "UBERON:0004671") AnnotationAssertion(rdfs:label "gyrus rectus") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (posterior horn lateral ventricle) AnnotationAssertion(Annotation( "BIRNLEX:1297") "Part of the lateral ventricle that extends posteriorly into the occipital lobe.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:OLV") AnnotationAssertion( "BIRNLEX:1297") AnnotationAssertion( "DHBA:10599") AnnotationAssertion( "EMAPA:17772") AnnotationAssertion( "FMA:83700") AnnotationAssertion( "NCIT:C33195") AnnotationAssertion(Annotation( "BIRNLEX:1297") "UMLS:C0152282") AnnotationAssertion(Annotation( "ncithesaurus:Occipital_Horn_of_the_Lateral_Ventricle") "UMLS:C0152282") AnnotationAssertion(Annotation( "FMA:83700") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "cornu occipitale (ventriculi lateralis)") AnnotationAssertion(Annotation( "FMA:83700") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "cornu occipitale ventriculi lateralis") AnnotationAssertion(Annotation( "FMA:83700") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "cornu posterius (ventriculi lateralis)") AnnotationAssertion(Annotation( "FMA:83700") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "cornu posterius ventriculi lateralis") AnnotationAssertion(Annotation( "BIRNLEX:1297") "occipital horn") AnnotationAssertion(Annotation( "FMA:83700") "occipital horn of lateral ventricle") AnnotationAssertion(Annotation( "BIRNLEX:1297") "posterior horn lateral ventricle") AnnotationAssertion(Annotation( "FMA:83700") "posterior horn of lateral ventricle") AnnotationAssertion(Annotation( "BIRNLEX:1297") "posterior horn of the lateral ventricle") AnnotationAssertion(Annotation( "FMA:83700") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "ventriculus lateralis, cornu occipitale") AnnotationAssertion(Annotation( "FMA:83700") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "ventriculus lateralis, cornu posterius") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004672") AnnotationAssertion(rdfs:label "posterior horn lateral ventricle") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (trigeminal nerve root) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A nerve root that extends_fibers_into a trigeminal nerve.") AnnotationAssertion( "TODO - check ZFA") AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:1346") AnnotationAssertion( "DHBA:12865") AnnotationAssertion( "DMBA:17739") AnnotationAssertion( "FMA:52610") AnnotationAssertion( "TAO:0000192") AnnotationAssertion( "ZFA:0000192") AnnotationAssertion(Annotation( "ZFA:0000192") Annotation( ) "radix descendens nervi trigemini") AnnotationAssertion(Annotation( "Obol:cjm") "root of trigeminal V nerve") AnnotationAssertion(Annotation( "FMA:52610") "root of trigeminal nerve") AnnotationAssertion(Annotation( "BIRNLEX:1346") "trigeminal nerve root") AnnotationAssertion(Annotation( "FMA:52610") "trigeminal neural root") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "TAO:0000192") "descending trigeminal root") AnnotationAssertion( "UBERON:0004673") AnnotationAssertion(rdfs:label "trigeminal nerve root") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (facial nerve root) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A nerve root that extends_fibers_into a facial nerve.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:7n") AnnotationAssertion( "BAMS:7nf") AnnotationAssertion( "BIRNLEX:1513") AnnotationAssertion( "DHBA:12862") AnnotationAssertion( "DMBA:17742") AnnotationAssertion( "FMA:53418") AnnotationAssertion(Annotation( "FMA:53418") "central part of facial nerve") AnnotationAssertion(Annotation( "FMA:53418") "facial nerve fibers") AnnotationAssertion(Annotation( "BIRNLEX:1513") "facial nerve root") AnnotationAssertion(Annotation( "FMA:53418") "facial neural root") AnnotationAssertion(Annotation( "FMA:53418") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "fibrae nervi facialis") AnnotationAssertion(Annotation( "FMA:53418") "root of facial nerve") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BAMS:7n") "facial nerve or its root") AnnotationAssertion(Annotation( "BAMS:7n") "facial nerve/root") AnnotationAssertion( "UBERON:0004674") AnnotationAssertion(rdfs:label "facial nerve root") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (hypoglossal nerve root) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A nerve root that extends_fibers_into a hypoglossal nerve.") AnnotationAssertion( "UBERON:0022760") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:12n") AnnotationAssertion( "BAMS:12nf") AnnotationAssertion( "BIRNLEX:1288") AnnotationAssertion( "BIRNLEX:1588") AnnotationAssertion( "DHBA:12886") AnnotationAssertion( "DMBA:17750") AnnotationAssertion( "FMA:72632") AnnotationAssertion(Annotation( "FMA:72632") "central part of hypoglossal nerve") AnnotationAssertion(Annotation( "FMA:72632") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "fibrae nervi hypoglossi") AnnotationAssertion(Annotation( "BIRNLEX:1288") "hypoglossal nerve fiber bundle") AnnotationAssertion(Annotation( "BIRNLEX:1288") Annotation( ) "hypoglossal nerve fiber bundle") AnnotationAssertion(Annotation( "FMA:72632") "hypoglossal nerve fibers") AnnotationAssertion(Annotation( "BIRNLEX:1588") "hypoglossal nerve root") AnnotationAssertion(Annotation( "FMA:72632") "hypoglossal nerve tract") AnnotationAssertion(Annotation( "FMA:72632") "root of hypoglossal nerve") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BIRNLEX:1288") "central part of hypoglossal nerve") AnnotationAssertion(Annotation( "BIRNLEX:1288") "hypoglossal nerve fibers") AnnotationAssertion(Annotation( "BAMS:12n") "hypoglossal nerve/ root") AnnotationAssertion(Annotation( "BIRNLEX:1288") "root of hypoglossal nerve") AnnotationAssertion( "UBERON:0004675") AnnotationAssertion(rdfs:label "hypoglossal nerve root") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (spinal cord lateral horn) AnnotationAssertion(Annotation( ) "A triangular field that is a lateralward projection of the postero-lateral part of the anterior column[WP, modified by cjm].") AnnotationAssertion( "TODO - check relationship to spinal cord lateral column. in FMA funiculus=white and horn=grep") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:2666") AnnotationAssertion( "FMA:256536") AnnotationAssertion( "MA:0001118") AnnotationAssertion( "NCIT:C32938") AnnotationAssertion(Annotation( "BIRNLEX:2666") "UMLS:C0228567") AnnotationAssertion(Annotation( "ncithesaurus:Lateral_Horn_of_the_Spinal_Cord") "UMLS:C0228582") AnnotationAssertion(Annotation( "FMA:256536") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "columna grisea intermedia medullare spinalis") AnnotationAssertion(Annotation( "FMA:256536") "intermediate gray column of spinal cord") AnnotationAssertion(Annotation( "FMA:256536") "lateral gray column of spinal cord") AnnotationAssertion(Annotation( "BIRNLEX:2666") "lateral gray horn") AnnotationAssertion(Annotation( "FMA:256536") "lateral gray matter of spinal cord") AnnotationAssertion(Annotation( "FMA:256536") "lateral horn of spinal cord") AnnotationAssertion(Annotation( "BIRNLEX:2666") "spinal cord intermediate horn") AnnotationAssertion(Annotation( "BIRNLEX:2666") "spinal cord lateral horn") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "cornu laterale medullae spinalis") AnnotationAssertion(Annotation( "FMA:256536") "intermediate grey column of spinal cord") AnnotationAssertion( "UBERON:0004676") AnnotationAssertion(rdfs:label "spinal cord lateral horn") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/e/e6/Gray675.png"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA-abduced-lr"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (spinal cord gray commissure) AnnotationAssertion(Annotation( "ISBN:0-683-40008-8"^^xsd:string) Annotation( "MP:0009696") "The band of grey substance spanning the midline of the spinal cord that surrounds the central canal.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:2669") AnnotationAssertion( "DHBA:12647") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37747") AnnotationAssertion( "FMA:68871") AnnotationAssertion( "FMA:77036") AnnotationAssertion( "HBA:9525") AnnotationAssertion(Annotation( "BIRNLEX:2669") "UMLS:C1512274") AnnotationAssertion(Annotation( "FMA:68871") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "area spinalis X") AnnotationAssertion(Annotation( "FMA:77036") "gray commissure of spinal cord") AnnotationAssertion( "lamina X") AnnotationAssertion(Annotation( "FMA:68871") "lamina X of gray matter of spinal cord") AnnotationAssertion(Annotation( "FMA:68871") "rexed lamina X") AnnotationAssertion(Annotation( "FMA:68871") "spinal area X") AnnotationAssertion(Annotation( "BIRNLEX:2669") "spinal cord gray commissure") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "spinal cord grey commissure") AnnotationAssertion(Annotation( "FMA:68871") "spinal lamina X") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:1649") "Rexed's lamina X") AnnotationAssertion(Annotation( "NeuroNames:1702") "Rexed's lamina X") AnnotationAssertion(Annotation( "NeuroNames:1649") "central gelatinous substance") AnnotationAssertion(Annotation( "NeuroNames:1649") "central glial substance") AnnotationAssertion(Annotation( ) Annotation( ) "commissura grisea anaterior medullae spinalis") AnnotationAssertion(Annotation( ) Annotation( ) "commissura grisea posterior medulla spinalis") AnnotationAssertion(Annotation( "FMA:77036") "grey commissure") AnnotationAssertion(Annotation( "FMA:77036") "grey commissure of spinal cord") AnnotationAssertion(Annotation( "NeuroNames:1702") Annotation( ) "lamina 10") AnnotationAssertion(Annotation( "NeuroNames:1649") "lamina X") AnnotationAssertion(Annotation( "NeuroNames:1702") "lamina X") AnnotationAssertion(Annotation( "NeuroNames:1649") Annotation( ) "lamina spinalis X") AnnotationAssertion(Annotation( "NeuroNames:1702") Annotation( ) "lamina spinalis X") AnnotationAssertion(Annotation( "NeuroNames:1702") Annotation( ) "substantia gelatinosa centralis") AnnotationAssertion(Annotation( "NeuroNames:1649") Annotation( ) "substantia gelatinosa spinalis") AnnotationAssertion(Annotation( "NeuroNames:1649") Annotation( ) "substantia gelationsa centralis") AnnotationAssertion(Annotation( "NeuroNames:1649") Annotation( ) "substantia gliosa (spinalis)") AnnotationAssertion( "UBERON:0004677") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "spinal cord gray commissure") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/c/c0/Medulla_spinalis_-_Substantia_grisea_-_English.svg"^^xsd:anyURI) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (apex of spinal cord dorsal horn) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:2670") AnnotationAssertion( "FMA:256700") AnnotationAssertion(Annotation( "FMA:256700") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "apex columnae posterioris") AnnotationAssertion(Annotation( "FMA:256700") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "apex cornu posterioris medullae spinalis") AnnotationAssertion(Annotation( "FMA:256700") "apex of dorsal gray column") AnnotationAssertion(Annotation( "FMA:256700") "apex of dorsal gray column of spinal cord") AnnotationAssertion(Annotation( "FMA:256700") "apex of dorsal horn of spinal cord") AnnotationAssertion(Annotation( "FMA:256700") "apex of posterior horn of spinal cord") AnnotationAssertion(Annotation( "BIRNLEX:2670") "apex of spinal cord dorsal horn") AnnotationAssertion(Annotation( "BIRNLEX:2670") "apex of spinal cord posterior horn") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:256700") "apex of posterior gray column") AnnotationAssertion( "UBERON:0004678") AnnotationAssertion(rdfs:label "apex of spinal cord dorsal horn") SubClassOf( ) # Class: (dentate gyrus molecular layer) AnnotationAssertion(Annotation( "BIRNLEX:4127") "The molecular layer of the dentate gyrus that is bounded by the pial surface superficially and the dentate gyrus granule cell layer deep. It is divided into 2 or more sublayers.") AnnotationAssertion( ) AnnotationAssertion( "BAMS:Mol") AnnotationAssertion( "BAMS:mo") AnnotationAssertion( "BIRNLEX:4127") AnnotationAssertion( "EMAPA:35279") AnnotationAssertion( "FMA:83677") AnnotationAssertion( "MA:0003122") AnnotationAssertion( "MBA:10703") AnnotationAssertion(Annotation( "BIRNLEX:4127") "dentate gyrus molecular layer") AnnotationAssertion(Annotation( "FMA:83677") "molecular layer of dentate gyrus") AnnotationAssertion(Annotation( "FMA:83677") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "stratum moleculare gyri dentati") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BAMS:Mol") "molecular layer of the dentate gyrus") AnnotationAssertion( "UBERON:0004679") AnnotationAssertion(rdfs:label "dentate gyrus molecular layer") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (body of fornix) AnnotationAssertion(Annotation( "BIRNLEX:739") "Part of fornix adjacent to the crura where they join together at the midline underneath the corpus callosum.") AnnotationAssertion(Annotation( ) "The columns (anterior pillars; fornicolumns) of the fornix arch downward in front of the interventricular foramen and behind the anterior commissure, and each descends through the gray substance in the lateral wall of the third ventricle to the base of the brain, where it ends in the corpus mammillare. [WP,unvetted][Wikipedia:Columns_of_fornix].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:bfx") AnnotationAssertion( "BAMS:fx") AnnotationAssertion( "BIRNLEX:739") AnnotationAssertion( "DHBA:10577") AnnotationAssertion( "DHBA:10578") AnnotationAssertion( "FMA:61968") AnnotationAssertion( "HBA:9252") AnnotationAssertion( "MBA:436") AnnotationAssertion(Annotation( "BIRNLEX:739") "UMLS:C0228289") AnnotationAssertion(Annotation( "BIRNLEX:739") "body of fornix") AnnotationAssertion(Annotation( "FMA:61968") "body of fornix of forebrain") AnnotationAssertion(Annotation( "FMA:61968") "column of fornix") AnnotationAssertion(Annotation( "FMA:61968") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "columna fornicis") AnnotationAssertion(Annotation( ) "columns of fornix") AnnotationAssertion(Annotation( "FMA:61968") "fornix body") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "columna fornicis") AnnotationAssertion(Annotation( "BAMS:fx") "columns of the fornix") AnnotationAssertion( "UBERON:0004680") AnnotationAssertion(rdfs:label "body of fornix") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/2/21/Gray747.png"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) Annotation( "NIF"^^xsd:string) ObjectSomeValuesFrom( )) DisjointClasses(Annotation( "NIFSTD"^^xsd:string) ) # Class: (vestibular system) AnnotationAssertion(Annotation( "NLXANAT:090819") "The sensory system for the sense of balance.") AnnotationAssertion(Annotation( ) "The vestibular system, which contributes to our balance and our sense of spatial orientation, is the sensory system that provides the dominant input about movement and equilibrioception. Together with the cochlea, a part of the auditory system, it constitutes the labyrinth of the inner ear, situated in the vestibulum in the inner ear. As our movements consist of rotations and translations, the vestibular system comprises two components: the semicircular canal system, which indicate rotational movements; and the otoliths, which indicate linear accelerations. The vestibular system sends signals primarily to the neural structures that control our eye movements, and to the muscles that keep us upright. The projections to the former provide the anatomical basis of the vestibulo-ocular reflex, which is required for clear vision; and the projections to the muscles that control our posture are necessary to keep us upright[Wikipedia:Vestibular_system].") AnnotationAssertion(Annotation( "FMA"^^xsd:string) "FMA and NIF have no part information for this class. This is a GAT in FMA") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0003381") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37986") AnnotationAssertion( "FMA:7193") AnnotationAssertion( "NLXANAT:090819") AnnotationAssertion(Annotation( "FMA:7193") "vestibular organ system") AnnotationAssertion(Annotation( "NLXANAT:090819") "vestibular system") AnnotationAssertion( "equilibrioception system") AnnotationAssertion( "vestibulomotor system") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004681") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "vestibular system") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (corona radiata of neuraxis) AnnotationAssertion(Annotation( "NLXANAT:090903") "Fan shaped white matter mass comprised of afferent and efferent fibers from the cerebral cortex arranged in radially arrayed bundles, converging towards the internal capsule (Carpenter, Core Text of Neuroanatomy, 3rd ed, 1985, pg. 30; Heimer, The Human Brain and Spinal Cord, 2nd ed., 1995, pg 84).") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "DHBA:12030") AnnotationAssertion( "FMA:18661") AnnotationAssertion( "HBA:265505046") AnnotationAssertion( "NLXANAT:090903") AnnotationAssertion(Annotation( "NLXANAT:090903") "corona radiata") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004682") AnnotationAssertion(rdfs:label "corona radiata of neuraxis") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/2/26/Gray745.png"^^xsd:anyURI) SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (parasubiculum) AnnotationAssertion(Annotation( "NLXANAT:091002") "A transitional zone between the presubiculum and the entorhinal area in the mouse (Paxinos-2001), the rat (Swanson-1998) and the primate (Zilles-1990). Defined on the basis of cytoarchitecture, it is more similar to the presubiculum than to the entorhinal area (Zilles-1990). (from Brain Info).") AnnotationAssertion( ) AnnotationAssertion( "BAMS:PAR") AnnotationAssertion( "BAMS:PAS") AnnotationAssertion( "BAMS:PaS") AnnotationAssertion( "BM:Tel-Cx-PASB") AnnotationAssertion( "DHBA:10316") AnnotationAssertion( "DMBA:16186") AnnotationAssertion( "FMA:77604") AnnotationAssertion( "HBA:4253") AnnotationAssertion( "MBA:843") AnnotationAssertion( "NLXANAT:091002") AnnotationAssertion(Annotation( "NLXANAT:091002") "OldNeuroNames:2304") AnnotationAssertion(Annotation( "NLXANAT:091002") "parasubicular area") AnnotationAssertion(Annotation( "DHBA:10316") "parasubicular cortex (parasubiculum)") AnnotationAssertion(Annotation( "NLXANAT:091002") "parasubiculum") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "DHBA:10316") "parasubicular cortex") AnnotationAssertion( "UBERON:0004683") AnnotationAssertion(rdfs:label "parasubiculum") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "NIFSTD"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (raphe nuclei) AnnotationAssertion(Annotation( ) Annotation( "NLXANAT:20090205") "The raphe nuclei are thin plates of cells in and immediately adjacent to the sagittal plane.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:RA") AnnotationAssertion( "EMAPA:35721") AnnotationAssertion( "FMA:84017") AnnotationAssertion( "MA:0003147") AnnotationAssertion( "MESH:A08.186.211.132.659.632") AnnotationAssertion( "NCIT:C97335") AnnotationAssertion( "NLXANAT:20090205") AnnotationAssertion( "TAO:0001429") AnnotationAssertion(Annotation( "ncithesaurus:Raphe_Nuclei") "UMLS:C0034671") AnnotationAssertion( "ZFA:0001429") AnnotationAssertion(Annotation( "FMA:84017") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "nuclei raphes") AnnotationAssertion(Annotation( "FMA:84017") "raphe nuclei") AnnotationAssertion(Annotation( "NLXANAT:20090205") "raphe nuclei") AnnotationAssertion(Annotation( "FMA:84017") "raphe nuclei set") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "nuclei raphes") AnnotationAssertion(Annotation( ) "raphe cluster") AnnotationAssertion(Annotation( "ZFA:0001429") "raphe nucleus") AnnotationAssertion(Annotation( "BAMS:RA") "raphe of mesenchephalon") AnnotationAssertion(Annotation( "FMA:84017") "set of raphe nuclei") AnnotationAssertion( "UBERON:0004684") AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "we treat NR obscurus, NR magnus etc as parts of the raphe nuclei. This is consistent with treatment in FMA, where the class is 'set of raphe nuclei'") AnnotationAssertion(rdfs:label "raphe nuclei") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/9/94/Gray694.png"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "GO"^^xsd:string) Annotation( "Wikipedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (obsolete middle temporal area) AnnotationAssertion(Annotation( "NLXANAT:20090308") "The term 'middle temporal visual area' was first used by Allman and Kaas (1971) for a region of the owl monkey brain located on the 'caudal third of the middle temporal gyrus.' Functionally, it contains 'a complete representation of the contralateral half of the visual field... This representation of the visual field (MT) corresponds to a histologically distinct area adjacent and rostral to area 19... The horizontal meridian divides MT into a lateral portion representing the upper visual quadrant and a medial portion representing the lower quadrant. The center of gaze is represented in the caudal portion of MT bordering area 19.'.") AnnotationAssertion( "UBERON:0013552") AnnotationAssertion( "NLXANAT:20090308") AnnotationAssertion(Annotation( "FMA:68618") "middle temporal area") AnnotationAssertion(Annotation( "NLXANAT:20090308") "middle temporal area") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004685") AnnotationAssertion(rdfs:label "obsolete middle temporal area") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (gastro-splenic ligament) AnnotationAssertion(Annotation( ) Annotation( ) "Peritoneum connecting the greater curvature of stomach with the hilum of the spleen[umich]. part of the greater omentum; derived from the dorsal mesogastrium in the embryo.") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000354") Annotation( "VHOG"^^xsd:string) Annotation( ) "Mesenteric fold extending from the greater curvature of the stomach to the spleen. [Dorian_AF, Elsevier's_encyclopaedic_dictionary_of_medicine, Part_B:_Anatomy_(1988)_Amsterdam_etc.:_Elsevier][VHOG]") AnnotationAssertion(Annotation( "MA"^^xsd:string) "in MA, EMAPA and EHDAA2 this is part of the dorsal mesogastrium. In wikipedia, and the above source, it is derived from the DM. This is a generic ligament in MA, we infer this and assert that this is a nonskeletal ligament") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0000702") AnnotationAssertion( "EHDAA:9160") AnnotationAssertion( "EMAPA:18285") AnnotationAssertion( "FMA:16517") AnnotationAssertion( "MA:0001619") AnnotationAssertion( "NCIT:C32671") AnnotationAssertion( "VHOG:0000354") AnnotationAssertion(Annotation( "FMA:16517") "gastrolienal ligament") AnnotationAssertion(Annotation( "FMA:16517") "gastrosplenc ligament") AnnotationAssertion(Annotation( "FMA:16517") "gastrosplenic ligament") AnnotationAssertion(Annotation( ) "ligamentum gastrosplenicum") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004686") AnnotationAssertion(rdfs:label "gastro-splenic ligament") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/8/8d/Gray1039.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "MA-propagated") ) SubClassOf(Annotation( "FMA"^^xsd:string) Annotation( "Wikipedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "MA-modified"^^xsd:string) Annotation( "Wikipedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lieno-renal ligament) AnnotationAssertion(Annotation( ) Annotation( ) "Peritoneum that attaches the spleen to the posterior abdominal wall over the left kidney. develops from the dorsal mesogastrium of the embryo[umich].") AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0004572") AnnotationAssertion( "EMAPA:18286") AnnotationAssertion( "FMA:16522") AnnotationAssertion( "MA:0001620") AnnotationAssertion(Annotation( "FMA:16522") "lienorenal ligament") AnnotationAssertion(Annotation( "FMA:16522") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "ligamentum lienorenale") AnnotationAssertion(Annotation( "FMA:16522") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "ligamentum splenorenale") AnnotationAssertion(Annotation( "FMA:16522") "ligamentum splenorenale (lienorenale, phrenicosplenicum)") AnnotationAssertion(Annotation( "FMA:16522") "phrenicolienal ligament") AnnotationAssertion(Annotation( "FMA:16522") "splenicorenal ligament") AnnotationAssertion(Annotation( "FMA:16522") "splenorenal ligament") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:16522") "phrenico-splenic ligament") AnnotationAssertion( "UBERON:0004687") AnnotationAssertion(rdfs:comment "Multiple sources support greater omentum assignment. E.g. http://medical-dictionary.thefreedictionary.com/splenorenal+ligament. We change the MA part_of assignment to develops_from") AnnotationAssertion(rdfs:label "lieno-renal ligament") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "MA-propagated") ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "MA-modified"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (costo-cervical trunk) AnnotationAssertion(Annotation( ) "The costocervical trunk arises from the upper and back part of the subclavian artery, behind the scalenus anterior on the right side, and medial to that muscle on the left side. Passing backward, it splits into the deep cervical artery and the supreme intercostal artery (or the Highest intercostal artery), which descends behind the pleura in front of the necks of the first and second ribs, and anastomoses with the first aortic intercostal (3rd posterior intercostal artery). As it crosses the neck of the first rib it lies medial to the anterior division of the first thoracic nerve, and lateral to the first thoracic ganglion of the sympathetic trunk. In the first intercostal space, it gives off a branch which is distributed in a manner similar to the distribution of the aortic intercostals. The branch for the second intercostal space usually joins with one from the highest aortic intercostal artery. This branch is not constant, but is more commonly found on the right side; when absent, its place is supplied by an intercostal branch from the aorta. Each intercostal gives off a posterior branch which goes to the posterior vertebral muscles, and sends a small spinal branch through the corresponding intervertebral foramen to the medulla spinalis and its membranes. [WP,unvetted].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37496") AnnotationAssertion( "FMA:10636") AnnotationAssertion( "MA:0001939") AnnotationAssertion(Annotation( "FMA:10636") "costocervical trunk") AnnotationAssertion(Annotation( "FMA:10636") "trunk of costocervical artery") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "truncus costocervicalis") AnnotationAssertion( "UBERON:0004688") AnnotationAssertion(rdfs:label "costo-cervical trunk") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/b/b3/Costocervical_trunk_with_branches.png"^^xsd:anyURI) SubClassOf( ) # Class: (naso-frontal vein) AnnotationAssertion(Annotation( ) "The nasofrontal vein is a vein in the eye which drains to the superior ophthalmic vein.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37227") AnnotationAssertion( "FMA:51729") AnnotationAssertion( "MA:0002182") AnnotationAssertion(Annotation( "FMA:51729") "nasofrontal vein") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004689") AnnotationAssertion(rdfs:label "naso-frontal vein") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA/obol"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (pancreaticoduodenal vein) AnnotationAssertion(Annotation( "ncithesaurus:Pancreatico-Duodenal_Vein") "A vein running parallel to the superior and inferior pancreatico-duodenal arteries that drains blood from the pancreas and duodenum into the superior mesenteric or portal veins.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37177") AnnotationAssertion( "FMA:15398") AnnotationAssertion( "MA:0002190") AnnotationAssertion( "NCIT:C53060") AnnotationAssertion(Annotation( "ncithesaurus:Pancreatico-Duodenal_Vein") "UMLS:C0226751") AnnotationAssertion(Annotation( "FMA:15398") "Superior posterior pancreaticoduodenal vein") AnnotationAssertion(Annotation( "MA:0002190") "pancreatico-duodenal vein") AnnotationAssertion(Annotation( "FMA:15398") "pancreaticoduodenal vein") AnnotationAssertion( "vena pancreaticoduodenalis") AnnotationAssertion(Annotation( "FMA:15398") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "vena pancreaticoduodenalis superior posterior") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004690") AnnotationAssertion(rdfs:label "pancreaticoduodenal vein") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA/obol"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (bulbourethral gland secretion) AnnotationAssertion(Annotation( ) "A bodily secretion that is produced by a bulbourethral gland.") AnnotationAssertion( "helps to lubricate the urethra for spermatozoa to pass through, neutralizing traces of acidic urine in the urethra, and helps flush out any residual urine or foreign matter") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:36544") AnnotationAssertion( "FMA:62968") AnnotationAssertion( "MA:0002524") AnnotationAssertion( "NCIT:C52554") AnnotationAssertion(Annotation( "ncithesaurus:Bulbourethral_Gland_Secretion") "UMLS:C1707061") AnnotationAssertion(Annotation( "FMA:62968") "bulbo-urethral gland secretion") AnnotationAssertion(Annotation( ) "pre-ejaculate") AnnotationAssertion(Annotation( "FMA:62968") "secretion of bulbo-urethral gland") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004691") AnnotationAssertion(rdfs:label "bulbourethral gland secretion") SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (external naris epithelium) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An epithelium that is part of an external naris [Automatically generated definition].") AnnotationAssertion( "EMAPA:18596") AnnotationAssertion( "MA:0001321") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004692") AnnotationAssertion(rdfs:label "external naris epithelium") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (Peyer's patch epithelium) AnnotationAssertion(Annotation( "ISBN:0-8153-1691-7") Annotation( "MGI:cwg"^^xsd:string) Annotation( "MP:0002388") "The specialized epithelium of the Peyer's patch.") AnnotationAssertion( "EMAPA:36506") AnnotationAssertion( "MA:0000731") AnnotationAssertion(Annotation( "MA:0000731") "Peyer's patch epithelium") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004693") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "Peyer's patch epithelium") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (arterial system smooth muscle) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A portion of smooth muscle tissue that is part of an arterial system [Automatically generated definition].") AnnotationAssertion( "EMAPA:36503") AnnotationAssertion( "MA:0000704") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004695") AnnotationAssertion(rdfs:label "arterial system smooth muscle") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (venous system smooth muscle) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A portion of smooth muscle tissue that is part of a venous system [Automatically generated definition].") AnnotationAssertion( "EMAPA:36613") AnnotationAssertion( "MA:0000715") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004696") AnnotationAssertion(rdfs:label "venous system smooth muscle") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (Peyer's patch germinal center) AnnotationAssertion(Annotation( "MP:0002391") "Area of the Peyer's patch where B cells proliferate and differentiate into plasma cells.") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:35684") AnnotationAssertion( "MA:0000734") AnnotationAssertion( "NCIT:C49600") AnnotationAssertion(Annotation( "ncithesaurus:Peyer_s_Patch_Germinal_Center") "UMLS:C1711398") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004697") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "Peyer's patch germinal center") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (vena cava endothelium) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An endothelium that is part of a vena cava [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37800") AnnotationAssertion( "MA:0000713") AnnotationAssertion( "NCIT:C49318") AnnotationAssertion(Annotation( "ncithesaurus:Vena_Cava_Endothelium") "UMLS:C1710623") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004698") AnnotationAssertion(rdfs:label "vena cava endothelium") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (outflow tract endothelium) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An endothelium that is part of a outflow tract [Automatically generated definition].") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001524") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "DOI:10.1254/jjp.87.253 Shigei T, Tsuru H, Ishikawa N, Yoshioka K, Absence of endothelium in invertebrate blood vessels: significance of endothelium and sympathetic nerve/medial smooth muscle in the vertebrate vascular system. Japanese Journal of Pharmacology (2001)") "It is assumed that during evolution, a circulatory system composed of the heart and endothelial tubular system first formed in vertebrates, medial smooth muscle then appeared for regulation of the system, and innervation of the muscle tissue took place. This sequence of development assumed for phylogenesis is actually realized in the ontogenetic processes.[well established][VHOG]") AnnotationAssertion( "MA:0000490") AnnotationAssertion( "VHOG:0001524") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004699") AnnotationAssertion(rdfs:label "outflow tract endothelium") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (arterial system endothelium) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An endothelium that is part of an arterial system [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:35145") AnnotationAssertion( "MA:0000703") AnnotationAssertion( "NCIT:C49329") AnnotationAssertion(Annotation( "ncithesaurus:Arterial_System_Endothelium") "UMLS:C1706849") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004700") AnnotationAssertion(rdfs:label "arterial system endothelium") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (venous system endothelium) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An endothelium that is part of a venous system [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:35907") AnnotationAssertion( "MA:0000714") AnnotationAssertion( "NCIT:C49320") AnnotationAssertion(Annotation( "ncithesaurus:Venous_System_Endothelium") "UMLS:C1710626") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004701") AnnotationAssertion(rdfs:label "venous system endothelium") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (respiratory system blood vessel endothelium) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A blood vessel endothelium that is part of a respiratory system [Automatically generated definition].") AnnotationAssertion( "EMAPA:35732") AnnotationAssertion( "MA:0001805") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004702") AnnotationAssertion(rdfs:label "respiratory system blood vessel endothelium") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (dorsal thalamus) AnnotationAssertion( "TODO. http://www.ncbi.nlm.nih.gov/pubmed/8167659") AnnotationAssertion(Annotation( "Ariens, p. 1192") ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "http://neurolex.org/wiki/Category_talk:Thalamus") Annotation( ) ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:DOR") AnnotationAssertion( "BAMS:Dorsal_thalamus") AnnotationAssertion( "BM:Die-Th") AnnotationAssertion( "DHBA:10391") AnnotationAssertion( "DMBA:16396") AnnotationAssertion( "EHDAA2:0000692") AnnotationAssertion( "EMAPA:35295") AnnotationAssertion( "FMA:62007") AnnotationAssertion( "HBA:4393") AnnotationAssertion( "MA:0000180") AnnotationAssertion( "PBA:128013018") AnnotationAssertion( "TAO:0000653") AnnotationAssertion( "ZFA:0000653") AnnotationAssertion( "ncithesaurus:Dorsal_Thalamus") AnnotationAssertion(Annotation( "FMA:62007") "dorsal thalamus") AnnotationAssertion(Annotation( "FMA:62007") "dorsal thalamus (Anthoney)") AnnotationAssertion(Annotation( ) Annotation( "BTO:0001365") Annotation( ) "thalamus dorsalis") AnnotationAssertion(Annotation( "PMCID:PMC3345571") "thalamus proper") AnnotationAssertion(Annotation( "ZFA:0000653") "thalamus, pars dorsalis") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "DMBA:DTTh") "dorsal tier of thalamus") AnnotationAssertion( "UBERON:0004703") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "dorsal thalamus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (bone fossa) AnnotationAssertion(Annotation( ) "A depression or hollow in a bone[WP].") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0001743") Annotation( "TAO"^^xsd:string) Annotation( "TAO:wd"^^xsd:string) "Anatomical space that is a concavity, shallow depression, or groove on a bone.[TAO]") AnnotationAssertion(Annotation( "FMA"^^xsd:string) "General Anatomical term in FMA; not restricted to bone in ncit; surface feature in VSAO; note that entities named 'fossa' are cavities in FMA, hence placement here") AnnotationAssertion( "fossa") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010439") AnnotationAssertion( "FMA:45791") AnnotationAssertion( "TAO:0001743") AnnotationAssertion(Annotation( "ncithesaurus:Fossa") "UMLS:C0836913") AnnotationAssertion( "VSAO:0005069") AnnotationAssertion( "ZFA:0005388") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "TAO:0001743") Annotation( ) "concavities") AnnotationAssertion(Annotation( "TAO:0001743") "concavity") AnnotationAssertion(Annotation( "TAO:0001743") "depression") AnnotationAssertion(Annotation( "TAO:0001743") Annotation( ) "depressions") AnnotationAssertion(Annotation( "TAO:0001743") Annotation( ) "fossae") AnnotationAssertion(Annotation( "TAO:0001743") "groove") AnnotationAssertion( "UBERON:0004704") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "bone fossa") SubClassOf(Annotation( "FMA-implied") ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (fenestra) AnnotationAssertion(Annotation( ) "An opening in the skull or other bones[WP].") AnnotationAssertion( "TODO check fenestra vs fossa. fenestra = hole, fossa = depression with bottom?") AnnotationAssertion( ) AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "fenestrae") AnnotationAssertion( "UBERON:0004705") AnnotationAssertion(rdfs:label "fenestra") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (bulbus cordis) AnnotationAssertion(Annotation( "ISBN:0-683-40008-8"^^xsd:string) Annotation( "MP:0010568") "A transient fetal dilation of the distal (or cranial) heart tube located where the arterial trunk joins the ventral roots of the aortic arches.") AnnotationAssertion( "TODO - check relationship to bulbus arteriosus") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0000173") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "A pear shaped chamber that functions as a capacitor, maintaining continuous blood flow into the gill arches. The bulbus arteriosus has three distinct layers. Hu et al. 2000.[TAO]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0000197") AnnotationAssertion( "EHDAA:438") AnnotationAssertion( "EHDAA:768") AnnotationAssertion( "EMAPA:16333") AnnotationAssertion( "FMA:70300") AnnotationAssertion( "NCIT:C34114") AnnotationAssertion(Annotation( "ncithesaurus:Bulbus_Cordis") "UMLS:C1284055") AnnotationAssertion(Annotation( "EHDAA2:0000197") Annotation( "JB:def") "primitive right ventricle endocardium") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004706") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "bulbus cordis") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/c/c9/Gray466.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pharyngula stage) AnnotationAssertion(Annotation( ) "A stage that follows the blastula, gastrula and neurula stages. At the pharyngula stage, all vertebrate embryos show remarkable similarities.") AnnotationAssertion( "Corresponds to E7-E11 in Mouse (Galis et al, TREE, 2001)") AnnotationAssertion( ) AnnotationAssertion( "DrerDO:0000052") AnnotationAssertion( "EFO:0001310") AnnotationAssertion( "OGES:000006") AnnotationAssertion( "ZFS:0000050") AnnotationAssertion( "phylotypic stage") AnnotationAssertion( "uberon") AnnotationAssertion( "pharyngula") AnnotationAssertion( "UBERON:0004707") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "pharyngula stage") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (paired limb/fin) AnnotationAssertion(Annotation( ) Annotation( "UBERON:cjm"^^xsd:string) "An appendage that is part of an appendage girdle complex.") AnnotationAssertion( "this class is the union of the classes limb, pectoral fin and pelvic fin.") AnnotationAssertion( "UBERON:0009872") AnnotationAssertion( "VSAO:0000067") AnnotationAssertion(Annotation( ) "girdle-associated appendage") AnnotationAssertion(Annotation( ) "limb or fin") AnnotationAssertion(Annotation( ) "limb/fin") AnnotationAssertion(Annotation( ) "pectoral or pelvic appendage") AnnotationAssertion(Annotation( ) "pelvic/pectoral appendage") AnnotationAssertion(Annotation( ) "jointed paired lateral appendage") AnnotationAssertion(Annotation( "VSAO:0000067") "paired appendage") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004708") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "paired limb/fin") SubClassOf(Annotation( "VSAO"^^xsd:string) ) SubClassOf(Annotation( "VSAO"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "definitional"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pelvic appendage) AnnotationAssertion(Annotation( "VSAO:0000150") "Paired appendage that consists of the posterior appendicular skeleton and associated soft and hard tissues, but excludes the pelvic girdle and its associated soft and hard tissues.") AnnotationAssertion( "UBERON:0009876") AnnotationAssertion( "posterior appendage") AnnotationAssertion( "VSAO:0000126") AnnotationAssertion(Annotation( ) "hindlimb/pelvic fin") AnnotationAssertion(Annotation( "VSAO:0000126") "pelvic appendage") AnnotationAssertion(Annotation( ) "pelvic limb/fin") AnnotationAssertion( "posterior limb/fin") AnnotationAssertion(Annotation( "VSAO:0000126") "posterior paired appendage") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004709") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "pelvic appendage") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "definitional"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses(Annotation( "lexical"^^xsd:string) ) # Class: (pectoral appendage) AnnotationAssertion(Annotation( "VSAO:0000150-modified") "Paired appendage that consists of the anterior appendicular skeleton and associated soft and hard tissues, but excludes the pectoral girdle and its associated soft and hard tissues.") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001753") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "DOI:10.1002/jmor.10264 Davis MC, Shubin NH, Force A, Pectoral fin and girdle development in the basal actinopterygians Polyodon spathula and Acipenser transmontanus. Journal of Morphology (2004)") "While the skeletons of teleost pectoral fins and tetrapod forelimbs are homologous at the level of endoskeletal radials, teleosts and tetrapods do not share homologous skeletal elements at the level of 'individuated' pro-, meso-, and metapterygia. Among osteichthyans, only basal actinopterygians retain the full complement of elements present in non-osteichthyan gnathostomes.[uncertain][VHOG]") AnnotationAssertion( "UBERON:0009875") AnnotationAssertion( "anterior appendage") AnnotationAssertion( "VHOG:0001753") AnnotationAssertion( "VSAO:0000125") AnnotationAssertion(Annotation( ) "anterior limb/fin") AnnotationAssertion(Annotation( "VSAO:0000148") "anterior paired appendage") AnnotationAssertion(Annotation( "VHOG:0001753") "forelimb - pectoral fin") AnnotationAssertion(Annotation( ) "forelimb or pectoral fin") AnnotationAssertion(Annotation( ) "forelimb/pectoral fin") AnnotationAssertion(Annotation( ) "pectoral limb/fin") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004710") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "pectoral appendage") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "definitional"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (jugular vein) AnnotationAssertion(Annotation( ) "The jugular veins are veins that bring deoxygenated blood from the head back to the heart via the superior vena cava.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0001744") AnnotationAssertion( "CALOHA:TS-0497") AnnotationAssertion( "EMAPA:18638") AnnotationAssertion( "GAID:536") AnnotationAssertion( "MA:0002154") AnnotationAssertion( "MESH:D007601") AnnotationAssertion( "NCIT:C12738") AnnotationAssertion(Annotation( "ncithesaurus:Jugular_Vein") "UMLS:C0022427") AnnotationAssertion( "uberon") AnnotationAssertion( "jugular") AnnotationAssertion(Annotation( "BTO:0001744") "vena jugularis") AnnotationAssertion( "UBERON:0004711") AnnotationAssertion(rdfs:label "jugular vein") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/f/f8/Gray558.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (corpus cavernosum penis) AnnotationAssertion(Annotation( ) Annotation( "BTO:0002019") "One of the columns of erectile tissue forming the dorsum and sides of the penis.") AnnotationAssertion(Annotation( "BTO:0002019") "corpus cavernosum") AnnotationAssertion(Annotation( "MA:0001743") "penis erectile tissue") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0002019") AnnotationAssertion( "EMAPA:29850") AnnotationAssertion( "EMAPA:29856") AnnotationAssertion( "FMA:19618") AnnotationAssertion( "MA:0001743") AnnotationAssertion( "NCIT:C32382") AnnotationAssertion( "NCIT:C49269") AnnotationAssertion(Annotation( "ncithesaurus:Corpora_Cavernosa") "UMLS:C0227937") AnnotationAssertion(Annotation( "ncithesaurus:Penis_Erectile_Tissue") "UMLS:C1709494") AnnotationAssertion(Annotation( "FMA:19618") "corpus cavernosum of penis") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0002019") "cavernous body of penis") AnnotationAssertion(Annotation( ) Annotation( ) "corpus cavernosum penis") AnnotationAssertion(Annotation( "BTO:0002019") Annotation( ) "corpus spongiosum penis") AnnotationAssertion(Annotation( "BTO:0002019") "penile corpus cavernosum") AnnotationAssertion(Annotation( "BTO:0002019") "spongy body of male urethra") AnnotationAssertion(Annotation( "BTO:0002019") "spongy body of penis") AnnotationAssertion( "UBERON:0004713") AnnotationAssertion(rdfs:label "corpus cavernosum penis") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/f/f6/Gray1155.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (septum pellucidum) AnnotationAssertion(Annotation( "BIRNLEX:1315") "A triangular double membrane, consisting of glial cells and fibers (Heimer, 1996) separating the anterior horns of the lateral ventricles of the brain. It is situated in the median plane and bounded by the corpus callosum and the body and columns of the fornix.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:SptP") AnnotationAssertion( "BAMS:spt") AnnotationAssertion( "BIRNLEX:1315") AnnotationAssertion( "BTO:0003448") AnnotationAssertion( "DHBA:12098") AnnotationAssertion( "FMA:61844") AnnotationAssertion( "MA:0002979") AnnotationAssertion( "MESH:D012688") AnnotationAssertion( "NCIT:C33536") AnnotationAssertion(Annotation( "BIRNLEX:1315") "UMLS:C0036700") AnnotationAssertion(Annotation( "ncithesaurus:Septum_Pellucidum") "UMLS:C0036700") AnnotationAssertion(Annotation( "BIRNLEX:1315") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=256") AnnotationAssertion(Annotation( "BIRNLEX:1315") "septal pellucidum") AnnotationAssertion(Annotation( ) "septum pellucidum of telencephalic ventricle") AnnotationAssertion(Annotation( "FMA:61844") "supracommissural septum") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "MP:0012004") "lateral septum") AnnotationAssertion(Annotation( "BTO:0003448") "pellucidum") AnnotationAssertion(Annotation( "NeuroNames:256") Annotation( ) "septum gliosum") AnnotationAssertion(Annotation( "BTO:0003448") Annotation( "MP:0012004") "septum lucidum") AnnotationAssertion( "UBERON:0004714") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "septum pellucidum") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/4/4d/Gray732.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (annulus fibrosus disci intervertebralis) AnnotationAssertion(Annotation( ) Annotation( "BTO:0003629") "The ring of fibrocartilage and fibrous tissue forming the circumference of the intervertebral disc; surrounds the nucleus pulposus, which is prone to herniation when the annulus fibrosus is compromised.") AnnotationAssertion(Annotation( "MA:0000111") "annulus fibrosus") AnnotationAssertion( ) AnnotationAssertion( "BTO:0003629") AnnotationAssertion( "EMAPA:32670") AnnotationAssertion( "FMA:13551") AnnotationAssertion( "MA:0000111") AnnotationAssertion(Annotation( "FMA:13551") "anulus fibrosus (diskus intervertebralis)") AnnotationAssertion(Annotation( "FMA:13551") "anulus fibrosus of intervertebral disk") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0003629") "annulus fibrosus of intervertebral disc") AnnotationAssertion(Annotation( "BTO:0003629") "fibrous ring of intervertebral disc") AnnotationAssertion( "UBERON:0004715") AnnotationAssertion(rdfs:label "annulus fibrosus disci intervertebralis") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/d/d9/Cervical_vertebra_english.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses( ) # Class: (conceptus) AnnotationAssertion(Annotation( ) Annotation( "BTO:0003834") "The embryo and its adnexa (appendages or adjunct parts) or associated membranes (i.e. the products of conception) The conceptus includes all structures that develop from the zygote, both embryonic and extraembryonic. It includes the embryo as well as the embryonic part of the placenta and its associated membranes - amnion, chorion (gestational sac), and yolk sac[WP].") AnnotationAssertion( "EHDAA2 places this as a subtype of organism. This leads to the inference that a conceptus is an embryo (if an embryo is defined as an organism at embryo stage), which eliminates the embryonic + extra-embryonic = conceptus") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AEO:0000194") AnnotationAssertion( "BTO:0003834") AnnotationAssertion( "EHDAA2:0000001") AnnotationAssertion( "EHDAA2:0003235") AnnotationAssertion( "EMAPA:36040") AnnotationAssertion( "NCIT:C34131") AnnotationAssertion(Annotation( "ncithesaurus:Conceptus") "UMLS:C1516779") AnnotationAssertion( "embryo plus adnexa") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004716") AnnotationAssertion(rdfs:label "conceptus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (Brodmann (1909) area 29) AnnotationAssertion(Annotation( ) "Brodmann area 29, also known as granular retrolimbic area 29 or granular retrosplenial cortex, is a cytoarchitecturally defined portion of the retrosplenial region of the cerebral cortex. In the human it is a narrow band located in the isthmus of cingulate gyrus. Cytoarchitecturally it is bounded internally by the ectosplenial area 26 and externally by the agranular retrolimbic area 30 (Brodmann-1909).") AnnotationAssertion(Annotation( "BTO:0003978") "A cytoarchitecturally defined portion of the retrosplenial region of the cerebral cortex. In the human it is a narrow band located in the isthmus of cingulate gyrus. Cytoarchitecturally it is bounded internally by the ectosplenial area 26 and externally by the agranular retrolimbic area 30[BTO:0003978].") AnnotationAssertion(Annotation( "BIRNLEX:1763") Annotation( "NIFSTD:SumsDB_abbrevSource"^^xsd:string) Annotation( ) "B09-29") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:1763") AnnotationAssertion( "BTO:0003978") AnnotationAssertion( "FMA:68626") AnnotationAssertion(Annotation( "BIRNLEX:1763") "UMLS:C1272490") AnnotationAssertion(Annotation( "BIRNLEX:1763") "B09-29") AnnotationAssertion(Annotation( "BIRNLEX:1763") "Brodmann (1909) area 29") AnnotationAssertion(Annotation( "FMA:68626") "Brodmann area 29") AnnotationAssertion(Annotation( "BIRNLEX:1763") "Brodmann area 29, granular retrolimbic") AnnotationAssertion(Annotation( "FMA:68626") "Brodmann's area 29") AnnotationAssertion(Annotation( "FMA:68626") "area 29 of Brodmann") AnnotationAssertion(Annotation( "BIRNLEX:1763") "area 29 of Brodmann-1909") AnnotationAssertion(Annotation( "BIRNLEX:1763") "area retrolimbica granularis") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:68626") "BA29") AnnotationAssertion(Annotation( ) Annotation( "BTO:0003978") "granular retrolimbic area 29") AnnotationAssertion( "UBERON:0004717") AnnotationAssertion(rdfs:label "Brodmann (1909) area 29") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (Brodmann (1909) area 26) AnnotationAssertion(Annotation( "BTO:0003979") "In the human this area is called ectosplenial area 26. It is a cytoarchitecturally defined portion of the retrosplenial region of the cerebral cortex. It is a narrow band located in the isthmus of cingulate gyrus adjacent to the fasciolar gyrus internally. It is bounded externally by the granular retrolimbic area 29[BTO:0003979].") AnnotationAssertion(Annotation( "BIRNLEX:1757") Annotation( "NIFSTD:SumsDB_abbrevSource"^^xsd:string) Annotation( ) "B09-26") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:1757") AnnotationAssertion( "BTO:0003979") AnnotationAssertion( "FMA:68623") AnnotationAssertion(Annotation( "BIRNLEX:1757") "UMLS:C1272489") AnnotationAssertion(Annotation( "BIRNLEX:1757") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=1031") AnnotationAssertion(Annotation( "BIRNLEX:1757") "B09-26") AnnotationAssertion(Annotation( "BIRNLEX:1757") "Brodmann (1909) area 26") AnnotationAssertion(Annotation( "FMA:68623") "Brodmann area 26") AnnotationAssertion(Annotation( "BIRNLEX:1757") "Brodmann area 26, ectosplenial") AnnotationAssertion(Annotation( "FMA:68623") "area 26 of Brodmann") AnnotationAssertion(Annotation( "BIRNLEX:1757") "area 26 of Brodmann-1909") AnnotationAssertion(Annotation( "BIRNLEX:1757") "area ectosplenialis") AnnotationAssertion(Annotation( "FMA:68623") "ectosplenial area") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:68623") "BA26") AnnotationAssertion(Annotation( "NeuroNames:1031") "area 26 of Brodmann (guenon)") AnnotationAssertion(Annotation( "NeuroNames:1031") "brodmann's area 26") AnnotationAssertion(Annotation( ) Annotation( "BTO:0003979") "ectosplenial area 26") AnnotationAssertion( "UBERON:0004718") AnnotationAssertion(rdfs:label "Brodmann (1909) area 26") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (kidney arcuate vein) AnnotationAssertion(Annotation( "ISBN:0-683-40008-8"^^xsd:string) Annotation( "MP:0011325") "Any of the veins that parallel the arcuate arteries, receive blood from the interlobular veins and straight venules, and terminate in the interlobar veins.") AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:0002593") "arcuate vein") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:28221") AnnotationAssertion( "FMA:272193") AnnotationAssertion( "FMA:321527") AnnotationAssertion( "MA:0002593") AnnotationAssertion(Annotation( "MP:0011325") "arciform vein of kidney") AnnotationAssertion(Annotation( "MP:0011325") "arcuate vein of kidney") AnnotationAssertion(Annotation( "MP:0011325") "renal arcuate vein") AnnotationAssertion(Annotation( ) Annotation( ) "venae arcuatae renis") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "arcuate veins") AnnotationAssertion( "UBERON:0004719") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "kidney arcuate vein") AnnotationAssertion( "Kidney:PioM.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) # Class: (cerebellar vermis) AnnotationAssertion(Annotation( "BIRNLEX:1106") "A subregion of the cerebellar cortex, consisting of the most medial zone of the cerebellar cortex, stradding the midline. May be continuous with the lateral cerebellar hemispheres in some areas of the cerebellum, e.g., dorsally, or separated by deeper fissures in others (e.g., ventrally).") AnnotationAssertion(Annotation( "WP"^^xsd:string) "In bony fish, or teleosts, it has been proposed that the cerebellar auricles, which receive a large amount of input from the vestibulolateral line system, constitute the vestibulocerebellum and are homologues of the flocculonodular lobe of higher vertebrates along with the corpus cerebelli, which receives spinocerebellar and tectocerebellar fibers. The labyrinth and the lateral line organs of lampreys have structural and functional similarity. An important difference between the two structures is that the arrangement of the lateral line organs are such that they are sensitive to relative motion of the fluid surrounding the animal, whereas the labyrinths, having very similar sensing mechanisms, are sensitive to endolymph, providing information concerning the animal's own equilibrium of the body and orientation in space") AnnotationAssertion(Annotation( "NIF"^^xsd:string) "we follow MBA and NIFSTD in making this part of the cerebellar cortex, but FMA may handle this differently") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:VERM") AnnotationAssertion( "BAMS:Ver") AnnotationAssertion( "BIRNLEX:1106") AnnotationAssertion( "BIRNLEX:1175") AnnotationAssertion( "CALOHA:TS-2059") AnnotationAssertion( "DHBA:10658") AnnotationAssertion( "DMBA:16814") AnnotationAssertion( "EMAPA:35214") AnnotationAssertion( "EV:0100298") AnnotationAssertion( "FMA:76928") AnnotationAssertion( "HBA:4698") AnnotationAssertion( "MA:0000202") AnnotationAssertion( "MBA:645") AnnotationAssertion( "NCIT:C33866") AnnotationAssertion(Annotation( "BIRNLEX:1106") "UMLS:C0228482") AnnotationAssertion(Annotation( "ncithesaurus:Vermis") "UMLS:C0228482") AnnotationAssertion(Annotation( "FMA:76928") "cerebellum vermis") AnnotationAssertion(Annotation( "BIRNLEX:1175") "vermal parts of the cerebellum") AnnotationAssertion(Annotation( "ABA:VERM") "vermal regions") AnnotationAssertion(Annotation( "FMA:76928") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "vermis cerebelli [I-X]") AnnotationAssertion(Annotation( "FMA:76928") "vermis of cerebellum") AnnotationAssertion(Annotation( "FMA:76928") "vermis of cerebellum [I-X]") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "vermis") AnnotationAssertion(Annotation( ) Annotation( ) "vermis cerebelli") AnnotationAssertion( "UBERON:0004720") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "cerebellar vermis") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/4/43/CerebellumDiv.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (crista ampullaris) AnnotationAssertion(Annotation( ) "The crista ampullaris is the sensory organ of rotation located in the semicircular canal of the inner ear. The function of the crista ampullaris is to sense angular acceleration and deceleration.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:32791") AnnotationAssertion( "FMA:77714") AnnotationAssertion( "MA:0002771") AnnotationAssertion( "NCIT:C32063") AnnotationAssertion(Annotation( "ncithesaurus:Ampullary_Crest") "UMLS:C0229465") AnnotationAssertion(Annotation( "FMA:77714") "ampullary crest of semicircular duct") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "MA:0002771") "ampullary crest") AnnotationAssertion(Annotation( ) "cristae ampullares") AnnotationAssertion( "UBERON:0004721") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "crista ampullaris") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/e/ec/Semicircular_canal_-_ampulla.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "MA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (deep cervical lymph node) AnnotationAssertion(Annotation( ) "The deep cervical lymph nodes are a group of cervical lymph nodes found near the internal jugular vein. They can be divided into upper and lower groups, or superior and inferior groups. Alternatively, they can be divided into deep anterior cervical lymph nodes and deep lateral cervical lymph nodes. They can also be divided into three groups: superior deep jugular, middle deep jugular, and 'inferior deep jugular'.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37510") AnnotationAssertion( "MA:0002885") AnnotationAssertion( "NCIT:C32431") AnnotationAssertion(Annotation( "ncithesaurus:Deep_Cervical_Lymph_Node") "UMLS:C0458298") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "lower jugular nodes") AnnotationAssertion(Annotation( ) "middle jugular nodes") AnnotationAssertion(Annotation( ) "upper jugular nodes") AnnotationAssertion( "UBERON:0004722") AnnotationAssertion(rdfs:label "deep cervical lymph node") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/b/b6/Illu_lymph_chain02.jpg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) # Class: (interlobular artery) AnnotationAssertion(Annotation( ) Annotation( "MP:0011316") "The branches of the arcuate arteries of the kidney that radiate outward throught the renal columns and supply the glomeruli[MP]. The first set of renal bloodvessels, the interlobular arteries (or cortical radiate arteries, or cortical radial arteries), are given off at right angles from the side of the arcuate arteries looking toward the cortical substance, and pass directly outward between the medullary rays to reach the fibrous tunic, where they end in the capillary network of this part. These vessels do not anastomose with each other, but form what are called end-arteries. In their outward course they give off lateral branches; these are the afferent vessels for the renal corpuscles; they enter the capsule, and end in the glomerulus. From each tuft the corresponding efferent vessel arises, and, having made its egress from the capsule near to the point where the afferent vessel enters, breaks up into a number of branches, which form a dense plexus within Bowman's capsule.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:28212") AnnotationAssertion( "FMA:70498") AnnotationAssertion( "MA:0002584") AnnotationAssertion( "NCIT:C32826") AnnotationAssertion(Annotation( "ncithesaurus:Interlobular_Artery") "UMLS:C1512856") AnnotationAssertion(Annotation( "FMA:70498") "interlobular renal artery") AnnotationAssertion(Annotation( "MP:0011316") "kidney interlobular artery") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "arteriae corticales radiatae") AnnotationAssertion(Annotation( ) Annotation( ) "arteriae interlobulares renis") AnnotationAssertion(Annotation( ) "cortical radial arteries") AnnotationAssertion(Annotation( ) "interlobular") AnnotationAssertion(Annotation( "FMA:70498") "renal interlobular artery") AnnotationAssertion( "UBERON:0004723") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "interlobular artery") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/0/02/Gray1128.png"^^xsd:anyURI) SubClassOf( ) DisjointClasses( ) # Class: (medial palpebral ligament) AnnotationAssertion(Annotation( ) "The medial palpebral ligament (tendo oculi), about 4 mm. in length and 2 mm. in breadth, is attached to the frontal process of the maxilla in front of the lacrimal groove. Crossing the lacrimal sac, it divides into two parts, upper and lower, each attached to the medial end of the corresponding tarsus. As the ligament crosses the lacrimal sac, a strong aponeurotic is given off from its posterior surface; this expands over the sac, and is attached to the posterior lacrimal crest.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37608") AnnotationAssertion( "MA:0001258") AnnotationAssertion( "NCIT:C52724") AnnotationAssertion(Annotation( "ncithesaurus:Medial_Palpebral_Ligament") "UMLS:C0229251") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "l. palpebrale mediale") AnnotationAssertion( "UBERON:0004724") AnnotationAssertion(rdfs:label "medial palpebral ligament") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/6/6f/Gray894.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (piriform cortex) AnnotationAssertion(Annotation( ) Annotation( "MP:0010009") "The subdivision of the laminated olfactory cortex with only three main layers that receive monosynaptic input from the olfactory bulb via the lateral olfactory tract; it is located bilaterally in the ventrolateral forebrain and is commonly divided into anterior and posterior regions.") AnnotationAssertion(Annotation( "WP"^^xsd:string) "Piriform cortical regions are present in the brains of amphibians, reptiles and mammals. The piriform cortex is among three areas that emerge in the telencephalon of amphibians, situated caudally to a dorsal area, which is caudal to a hippocampal area. Farther along the phylogenic timeline, the telencephalic bulb of reptiles as viewed in a cross section of the transverse plane extends with the archipallial hippocampus folding toward the midline and down as the dorsal area begins to form a recognizable cortex. As mammalian cerebrums developed, volume of the dorsal cortex increased in slightly greater proportion, as compared proportionally with increased overall brain volume, until it enveloped the hippocampal regions. Recognized as neopallium or neocortex, enlarged dorsal areas envelop the paleopallial piriform cortex in humans and Old World monkeys. Among taxonomic groupings of mammals, the piriform cortex and the olfactory bulb become proportionally smaller in the brains of phylogenically younger species. The piriform cortex occupies a greater proportion of the overall brain and of the telencephalic brains of insectivores than in primates. The piriform cortex continues to occupy a consistent albeit small and declining proportion of the increasingly large telencephalon in the most recent primate species while the volume of the olfactory bulb becomes less in proportion") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:PIR") AnnotationAssertion( "BAMS:Pir") AnnotationAssertion( "BIRNLEX:1097") AnnotationAssertion( "BTO:0002651") AnnotationAssertion( "DHBA:10311") AnnotationAssertion( "EMAPA:32767") AnnotationAssertion( "EV:0100178") AnnotationAssertion( "HBA:10142") AnnotationAssertion( "MA:0000978") AnnotationAssertion(Annotation( "BIRNLEX:1097") "UMLS:C0228280") AnnotationAssertion(Annotation( "BIRNLEX:1097") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=165") AnnotationAssertion(Annotation( ) Annotation( ) "cortex piriformis") AnnotationAssertion(Annotation( "BIRNLEX:2706") "primary olfactory areas") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:165") Annotation( ) "area prepiriformis") AnnotationAssertion(Annotation( "NeuroNames:165") Annotation( ) "eupalaeocortex") AnnotationAssertion(Annotation( "ISBN:0471888893"^^xsd:string) "olfactory pallium") AnnotationAssertion(Annotation( "NeuroNames:165") Annotation( ) "palaeocortex II") AnnotationAssertion(Annotation( ) "paleopallium") AnnotationAssertion(Annotation( "BTO:0002651") Annotation( "MA:0000978") "piriform area") AnnotationAssertion(Annotation( "BTO:0002651") "piriform lobe") AnnotationAssertion(Annotation( ) Annotation( ) "primary olfactory cortex") AnnotationAssertion(Annotation( ) "pyriform cortex") AnnotationAssertion(Annotation( ) "pyriform lobe") AnnotationAssertion(Annotation( "NeuroNames:165") Annotation( ) "regio praepiriformis") AnnotationAssertion( "UBERON:0004725") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "piriform cortex") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/b/b1/Human_brainstem_anterior_view_2_description.JPG"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (vasa recta) AnnotationAssertion(Annotation( ) "In the blood supply of the kidney, the vasa recta renis (or straight arteries of kidney, or straight arterioles of kidney) form a series of straight capillaries in the medulla. They lie parallel to the loop of Henle. These vessels branch off the efferent arterioles of juxtamedullary nephrons (those nephrons closest to the medulla), enter the medulla, and surround the loop of Henle.") AnnotationAssertion( "TODO - is this a vein or set of veins? in MA it is a venous blood vessel") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:30043") AnnotationAssertion( "FMA:72006") AnnotationAssertion( "MA:0002595") AnnotationAssertion( "galen:ArteriaeRectae") AnnotationAssertion(Annotation( "FMA:72006") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "arteriolae rectae renis") AnnotationAssertion(Annotation( "MP:0011324") "kidney vasa recta") AnnotationAssertion(Annotation( "EMAPA:30043") "renal medullary capillary") AnnotationAssertion(Annotation( "FMA:72006") "set of straight arterioles of kidney") AnnotationAssertion(Annotation( "FMA:72006") "straight arterioles of kidney") AnnotationAssertion(Annotation( "FMA:72006") "vasa recta of kidney") AnnotationAssertion(Annotation( "FMA:72006") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "vasa recta renis") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "arteria recta") AnnotationAssertion(Annotation( ) "arteriae rectae") AnnotationAssertion(Annotation( ) Annotation( ) "arteriolae rectae renis") AnnotationAssertion(Annotation( ) "arteriolae recti") AnnotationAssertion(Annotation( ) "vasa rectae") AnnotationAssertion( "UBERON:0004726") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "vasa recta") AnnotationAssertion( "Kidney:nephron.png"^^xsd:anyURI) SubClassOf( ) # Class: (cochlear nerve) AnnotationAssertion(Annotation( ) "A nerve in the head that carries signals from the cochlea of the inner ear to the brain. It is part of the vestibulocochlear nerve, the 8th cranial nerve which is found in higher vertebrates; the other portion of the 8th cranial nerve is the vestibular nerve which carries spatial orientation information from the semicircular canals. The cochlear nerve is a sensory nerve, one which conducts to the brain information about the environment, in this case acoustic energy impinging on the tympanic membrane. The cochlear nerve arises from within the cochlea and extends to the brainstem, where its fibers make contact with the cochlear nucleus, the next stage of neural processing in the auditory system[WP].") AnnotationAssertion( "cochlear component") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:cVIIIn") AnnotationAssertion( "BM:VIIIN") AnnotationAssertion( "BTO:0003490") AnnotationAssertion( "EHDAA2:0002195") AnnotationAssertion( "EMAPA:17802") AnnotationAssertion( "FMA:53431") AnnotationAssertion( "GAID:723") AnnotationAssertion( "MA:0001110") AnnotationAssertion( "MBA:948") AnnotationAssertion( "MESH:D003056") AnnotationAssertion( "NCIT:C12697") AnnotationAssertion( "OpenCyc:Mx4rwIhQfZwpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Cochlear_Nerve") "UMLS:C0009201") AnnotationAssertion( "VHOG:0001182") AnnotationAssertion(Annotation( "FMA:53431") "auditory nerve") AnnotationAssertion(Annotation( "FMA:53431") "cochlear root of acoustic nerve") AnnotationAssertion(Annotation( "FMA:53431") "cochlear root of eighth cranial nerve") AnnotationAssertion(Annotation( "MA:0001110") "vestibulocochlear VIII nerve cochlear component") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0003490") "nervus vestibulocochlearis") AnnotationAssertion(Annotation( "EMAPA:17802") "vestibulocochlear nerve cochlear component") AnnotationAssertion( "UBERON:0004727") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "cochlear nerve") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (amphibian larval stage) AnnotationAssertion(Annotation( "GO:0002117") "Amphibian larvae, sometimes called pollywogs or tadpoles, hatch from eggs and begin to grow limbs and other adult physical features at various times, depending on the species, before they metamorphose into the adult form.") AnnotationAssertion( ) AnnotationAssertion(Annotation( "XAO"^^xsd:string) "the XAO class denotes a stage") AnnotationAssertion( "larva stage") AnnotationAssertion( "XAO:1000008") AnnotationAssertion( "XtroDO:0000056") AnnotationAssertion(Annotation( ) Annotation( ) "polliwog") AnnotationAssertion(Annotation( ) Annotation( ) "polliwog stage") AnnotationAssertion(Annotation( ) Annotation( ) "tadpole") AnnotationAssertion(Annotation( ) Annotation( ) "tadpole stage") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "XAO:1000008") "larva") AnnotationAssertion( "UBERON:0004728") AnnotationAssertion(rdfs:label "amphibian larval stage") AnnotationAssertion(rdfs:seeAlso "https://github.com/obophenotype/uberon/issues/534"^^xsd:anyURI) SubClassOf( ) # Class: (nematode larval stage) AnnotationAssertion(Annotation( "GO:0002119") "Nematode larval development begins with the newly hatched first-stage larva (L1) and ends with the end of the last larval stage (for example the fourth larval stage (L4) in C. elegans). Each stage of nematode larval development is characterized by proliferation of specific cell lineages and an increase in body size without alteration of the basic body plan. Nematode larval stages are separated by molts in which each stage-specific exoskeleton, or cuticle, is shed and replaced anew.") AnnotationAssertion( "WBls:0000023") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004729") AnnotationAssertion(rdfs:label "nematode larval stage") AnnotationAssertion(rdfs:seeAlso "https://github.com/obophenotype/uberon/issues/567"^^xsd:anyURI) SubClassOf( ) # Class: (instar larval stage) AnnotationAssertion(Annotation( "GO:0002168") "This begins with the newly hatched first-instar larva, through its maturation to the end of the last larval stage. An example of this process is found in Drosophila melanogaster.") AnnotationAssertion( ) AnnotationAssertion( "FBdv:00005336") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004730") AnnotationAssertion(rdfs:label "instar larval stage") AnnotationAssertion(rdfs:seeAlso "https://github.com/obophenotype/uberon/issues/526"^^xsd:anyURI) SubClassOf( ) # Class: (neuromere) AnnotationAssertion(Annotation( ) Annotation( ) "A transverse unitary subdivision of the neural tube that shares a common dorsoventral structure (floor, basal, alar, and roof plates), but each having differential molecular identities and fates; they comprise the secondary prosencephalon, diencephalon (prosomeres), the midbrain (mesomeres), and the hindbrain (rhombomeres).") AnnotationAssertion( "We take the definition of neuromere from Puelles et al, although the existence of mesomeres and prosomeres may not be widely accepted") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0001328") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "A metameric segment of the central nervous system.[ZFA]") AnnotationAssertion( "Melissa Haendel") AnnotationAssertion( "2009-06-18T09:00:04Z") AnnotationAssertion( ) AnnotationAssertion( "NLX:147842") AnnotationAssertion( "TAO:0001328") AnnotationAssertion( "ZFA:0001328") AnnotationAssertion(Annotation( ) "neural tube metameric segment") AnnotationAssertion( "neural tube segment") AnnotationAssertion( "neuromere") AnnotationAssertion(Annotation( "TAO:0001328") Annotation( ) "neuromeres") AnnotationAssertion( "uberon") AnnotationAssertion( "neural metamere") AnnotationAssertion( "neural segment") AnnotationAssertion( "UBERON:0004731") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "neuromere") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (segmental subdivision of nervous system) AnnotationAssertion(Annotation( ) Annotation( "FBbt:00005140") "Any segmental subdivision of a nervous system. Includes metameric developmental segments, such as vertebrates neuromeres.") AnnotationAssertion( "revisit this after CARO is revised and/or we have defined metameric segment; note that with the additional of an A/P axis constraint this corresponds to what Richter at al call a neuromere (PMID:21062451)") AnnotationAssertion( "FBbt:00005140") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FBbt:00005140") "neuromere") AnnotationAssertion( "UBERON:0004732") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "segmental subdivision of nervous system") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (segmental subdivision of hindbrain) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An organ subunit that is part of a hindbrain [Automatically generated definition].") AnnotationAssertion( "FMA:61998") AnnotationAssertion(Annotation( "FMA:61998") "hindbrain segment") AnnotationAssertion(Annotation( "FMA:61998") "segment of hindbrain") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004733") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "segmental subdivision of hindbrain") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (gastrula) AnnotationAssertion(Annotation( ) Annotation( ) "Organism at the gastrula stage.") AnnotationAssertion(Annotation( "NCIT") "We explicitly merge the NCITA terms here") AnnotationAssertion( "UBERON:0007012") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BILA:0000060") AnnotationAssertion( "BTO:0001403") AnnotationAssertion( "FBbt:00005317") AnnotationAssertion( "FMA:293108") AnnotationAssertion( "GAID:1302") AnnotationAssertion( "MESH:A16.254.412") AnnotationAssertion( "MIAA:0000179") AnnotationAssertion( "NCIT:C34057") AnnotationAssertion( "NCIT:C34058") AnnotationAssertion(Annotation( "ncithesaurus:Gastrula") "UMLS:C0017199") AnnotationAssertion(Annotation( "ncithesaurus:Trilaminar_Embryonic_Disc") "UMLS:C1284022") AnnotationAssertion(Annotation( "BILA:0000060") "gastrula embryo") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "blastocystis trilaminaris") AnnotationAssertion(Annotation( ) "tri-laminar disc") AnnotationAssertion(Annotation( ) "tri-laminar disk") AnnotationAssertion(Annotation( ) "trilaminar blastocyst") AnnotationAssertion(Annotation( ) "trilaminar blastoderm") AnnotationAssertion(Annotation( ) "trilaminar disc") AnnotationAssertion(Annotation( ) "trilaminar disk") AnnotationAssertion(Annotation( ) "trilaminar germ") AnnotationAssertion( "UBERON:0004734") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "gastrula") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (archenteron) AnnotationAssertion(Annotation( "BTO:0001696") "The cavity of a gastrula forming a primitive gut.") AnnotationAssertion(Annotation( ) ) AnnotationAssertion(Annotation( "WP"^^xsd:string) "The primitive gut that forms during gastrulation in the developing blastula. It develops into the digestive tract of an animal. As primary mesenchyme cells detach from the vegetal pole in the blastula and enter the fluid filled cavity in the center (the blastocoel), the remaining cells at the vegetal pole flatten to form a vegetal plate. This buckles inwards towards the blastocoel in a process called invagination. The cells continue to be rearranged until the shallow dip formed by invagination transforms into a deeper, narrower pouch formed by the gastrula's endoderm. This narrowing and lengthening of the archenteron is driven by convergent extension. The open end of the archenteron is called the blastopore. The filopodia--thin fibers formed by the mesenchyme cells--found in a late gastrula contract to drag the tip of the archenteron across the blastocoel. The endoderm of the archenteron will fuse with the ectoderm of the blastocoel wall. At this point gastrulation is complete, and the gastrula has a functional digestive tube. The indentation that is actually formed is called the lip of the blastopore in amphibians and fish, and the primitive streak in birds and mammals. Each is controlled by the dorsal blastopore, and primitive node (also known as Hensen's node), respectively") AnnotationAssertion( ) AnnotationAssertion( "AAO:0010430") AnnotationAssertion( "BTO:0001696") AnnotationAssertion( "XAO:0000092") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "XAO:0000092") "gastrocoel") AnnotationAssertion(Annotation( ) "mesenteron") AnnotationAssertion( "primitive endodermal cavity") AnnotationAssertion( "UBERON:0004735") AnnotationAssertion(rdfs:label "archenteron") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (metanephric glomerulus) AnnotationAssertion(Annotation( "GO:0072224") "Glomerulus of the mature vertebrate kidney, or metanephros.") AnnotationAssertion( "VHOG:0001242") AnnotationAssertion( "glomerulus of metanephros") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004736") AnnotationAssertion(rdfs:label "metanephric glomerulus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (metanephric collecting duct) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A collecting duct of renal tubule that is part of a metanephros [Automatically generated definition].") AnnotationAssertion( "VHOG:0000983") AnnotationAssertion( "collecting duct of metanephros") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "VHOG:0000983") "metanephric collecting tubule") AnnotationAssertion( "UBERON:0004737") AnnotationAssertion(rdfs:label "metanephric collecting duct") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "Wikipedia-abduced") ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (metanephric juxtaglomerular apparatus) AnnotationAssertion(Annotation( "GO:0072206") "Juxtaglomerular apparatus of the mature vertebrate kidney, or metanephros.") AnnotationAssertion( "juxtaglomerular apparatus of metanephros") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004738") AnnotationAssertion(rdfs:label "metanephric juxtaglomerular apparatus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pronephric glomerulus) AnnotationAssertion(Annotation( ) Annotation( ) Annotation( ) Annotation( ) Annotation( "GO:0072013") Annotation( "GOC:mtg_kidney_jan10") Annotation( "XAO:0000318") "The glomus forms from the splanchnic intermediate mesoderm and is the vascularized filtration unit, filtering the blood before it enters the tubules. The glomus is external to the nephron and extends over more than one body segment.") AnnotationAssertion(Annotation( "ISBN:0073040584"^^xsd:string) "a glomus differs from a glomerulus in that each vascular glomus services several tubules") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0001557") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "Paired highly vascularized portion of the pronephros. Left and right glomeruli are fused at the midline. Begins to function between 40 and 48hpf. Drummond, 2000.[TAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001237") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "PMID:9806915 Drummond IA, Majumdar A, Hentschel H, Elger M, Solnica-Krezel L, Schier AF, Neuhauss SCF, Stemple DL, Zwartkruis F, Rangini Z, Driever W, Fishman MC, Early development of the zebrafish pronephros and analysis of mutations affecting pronephric function. Development (1998), ISBN:978-0030223693 Liem KF, Bemis WE, Walker WF, Grande L, Functional Anatomy of the Vertebrates: An Evolutionary Perspective (2001) p.636") "The teleost pronephros shares many essential features with the amphibian pronephros including its derivation from mesoderm associated with the coelom and the derivation of the glomerular blood supply from the medial dorsal aorta. However, unlike the pronephros of amphibians, which have an external glomus and tubules with nephrostomes open to the coelom, the mature teleost pronephros has no connection to the body cavity and instead functions as a closed system (reference 1); This variation in nephron types [with external glomeruli that open into the coelom and with internal glomeruli that do not connect with the coelom] and their pattern of distribution suggest an evolutionary sequence. Ancestral craniates probably had an external glomerulus and nephrostomes, as do the first few to develop in very primitive craniates. (...) The mechanism would become more efficient as the coelomic recess into which each glomerulus discharged became a part of the tubule, that is, grew around the glomerulus as a renal capsule. The glomerulus becomes internal. The nephrostomes were lost during subsequent evolution, leaving the type of renal tubule found in most vertebrates (reference 2).[well established][VHOG]") AnnotationAssertion(Annotation( "GO") "GO treats glomus and pronephric glomerulus differently") AnnotationAssertion( "UBERON:0004191") AnnotationAssertion( ) AnnotationAssertion( "AAO:0011049") AnnotationAssertion( "TAO:0001557") AnnotationAssertion( "VHOG:0001237") AnnotationAssertion( "XAO:0000318") AnnotationAssertion( "ZFA:0001557") AnnotationAssertion( "glomerulus of pronephros") AnnotationAssertion(Annotation( "XAO:0000318") "glomus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "XAO:0000318") "corpuscle") AnnotationAssertion(Annotation( "XAO:0000318") Annotation( ) "glomera") AnnotationAssertion(Annotation( "VHOG:0001237") "pronephric glomera") AnnotationAssertion(Annotation( "VHOG:0001237") Annotation( ) "pronephric glomeruli") AnnotationAssertion(Annotation( "VHOG:0001237") "pronephric glomus") AnnotationAssertion( "UBERON:0004739") AnnotationAssertion(rdfs:label "pronephric glomerulus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "XAO"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (basibranchial bone) AnnotationAssertion(Annotation( ) Annotation( "TAO:wd"^^xsd:string) "A basibranchial element that is bone. Basibranchial elements are ventral, median, and associated with a single pharyngeal arch in the pharyngeal arch 3-7 skeleton.") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0000686") Annotation( "AAO"^^xsd:string) Annotation( "AAO:Duellman_and_Trueb_1994"^^xsd:string) "Medial element to which other parts of the hyoid apparatus are attached.[AAO]") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0000170") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "Replacement bone that is ventral, median, and associated with a single pharyngeal arch in the pharyngeal arch 3-7 skeleton.[TAO]") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0000170") Annotation( "TAO"^^xsd:string) "relationship loss: develops_from copula (TAO:0001220)[TAO]") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0000686") Annotation( "AAO"^^xsd:string) "relationship loss: part_of hyoid apparatus skeleton (AAO:0000682)[AAO]") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0000170") Annotation( "TAO"^^xsd:string) "relationship loss: subclass basibranchial element (TAO:0001914)[TAO]") AnnotationAssertion( "AAO:0000686") AnnotationAssertion( "EFO:0003503") AnnotationAssertion( "TAO:0000170") AnnotationAssertion( "ZFA:0000170") AnnotationAssertion(Annotation( "TAO:0000170") "basibranchial bone") AnnotationAssertion(Annotation( ) "basibranchial bones") AnnotationAssertion( "uberon") AnnotationAssertion( "copula 1 bone") AnnotationAssertion( "copula I bone") AnnotationAssertion( "UBERON:0004740") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "basibranchial bone") SubClassOf( ) SubClassOf( ) # Class: (dentary) AnnotationAssertion(Annotation( "VHOG:0001022") "The dentary is a dermal bone that forms the antero-lateral part of the lower jaw in fishes and amphibians, extending to the whole lower jaw in mammals[VHOG,modified].") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0000191") Annotation( "TAO"^^xsd:string) Annotation( "TAO:GA_TG") "Dermal bone that is usually the anteriormost bone of the lower jaw, and that articulates with the angular, or anguloarticular bone, posteriorly, and carries part of the mandibular sensory canal and pore openings of the mandibular sensory canal on its lateral surface. The dentary is a paired bone.[TAO]") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0000124") Annotation( "AAO"^^xsd:string) Annotation( "AAO:LAP"^^xsd:string) "Ossified element of intramembranous origin that invests the lateral margin of Meckel's cartilage thereby forming the lateral side of the mandible in anurans and salamanders (Duellman & Trueb, 1994:293). In caecilians, the dentary is part of a compound bone termed the pseudodentary.[AAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001022") Annotation( "VHOG"^^xsd:string) Annotation( ) "The dentary is a dermal bone that forms the antero-lateral part of the lower jaw in fishes and amphibians. In mammals the lower jaw consists entirely of the dentary bone. [Bemis_WE, Functional_Anatomy_of_the_Vertebrates:_An_Evolutionary_Perspective, Grande_L, Third_Edition_(2001)_Orlando_Fla.:_Harcourt_College_Publishers, Walker_WF, ZFA:0000191_and_Liem_KF, p.248][VHOG]") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0000191") Annotation( "TAO"^^xsd:string) "relationship loss: overlaps dentary-anguloarticular joint (TAO:0001749)[TAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001022") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0030223693 Liem KF, Bemis WE, Walker WF, Grande L, Functional Anatomy of the Vertebrates: An Evolutionary Perspective (2001) p.248") "Of all these bones [dentary, splenials, coronoids, angular, surangular and prearticular], only the dentary remains in the lower jaw of a mammal.[well established][VHOG]") AnnotationAssertion( "In lobe-finned fishes and the early fossil tetrapods, the bone homologous to the mandible of mammals is merely the largest of several bones in the lower jaw. In such animals, it is referred to as the dentary bone, and forms the body of the outer surface of the jaw. It is bordered below by a number of splenial bones, while the angle of the jaw is formed by a lower angular bone and a suprangular bone just above it. The inner surface of the jaw is lined by a prearticular bone, while the articular bone forms the articulation with the skull proper. Finally a set of three narrow coronoid bones lie above the prearticular bone. As the name implies, the majority of the teeth are attached to the dentary, but there are commonly also teeth on the coronoid bones, and sometimes on the prearticular as well. This complex primitive pattern has, however, been simplified to various degrees in the great majority of vertebrates, as bones have either fused or vanished entirely. In teleosts, only the dentary, articular, and angular bones remain, while in living amphibians, the dentary is accompanied only by the prearticular, and, in salamanders, one of the coronoids. The lower jaw of reptiles has only a single coronoid and splenial, but retains all the other primitive bones except the prearticular.") AnnotationAssertion( ) AnnotationAssertion( "AAO:0000124") AnnotationAssertion( "EFO:0003508") AnnotationAssertion( "TAO:0000191") AnnotationAssertion( "VHOG:0001022") AnnotationAssertion( "ZFA:0000191") AnnotationAssertion(Annotation( "TAO:0000191") Annotation( ) "dentaries") AnnotationAssertion(Annotation( "ZFA:0000191") "dentary bone") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "AAO:0000124") "dentale") AnnotationAssertion(Annotation( "AAO:0000124") "os dentale") AnnotationAssertion(Annotation( "AAO:0000124") "sur-angulaire") AnnotationAssertion( "UBERON:0004742") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "dentary") SubClassOf( ) SubClassOf(Annotation( "ZFA"^^xsd:string) ) SubClassOf( ) SubClassOf(Annotation( "mandibular series") Annotation( "ISBN:0073040584"^^xsd:string) Annotation( "ZFA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2-modified") ObjectSomeValuesFrom( )) # Class: (articular/anguloarticular) AnnotationAssertion( "TODO - resolve part_of relationships") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0000467") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "Dermal and endochondral compound bone that results from the fusion of the dermal angular and the endochondral articular and forms the posterior part of the lower jaw. It articulates with the dentary anteriorly and with the retroarticular postero-medially. The anguloarticular is paired.[TAO]") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0000028") Annotation( "AAO"^^xsd:string) Annotation( "AAO:LAP"^^xsd:string) "Endochondral ossification of the posterior articular part of Meckel's cartilage.[AAO]") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0000467") Annotation( "TAO"^^xsd:string) "relationship loss: develops_from articular bone (TAO:0001805)[TAO]") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0000467") Annotation( "TAO"^^xsd:string) "relationship loss: overlaps dentary-anguloarticular joint (TAO:0001749)[TAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000690") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "DOI:10.1017/S0022215100009087 Gerrie J, The phylogeny of the mammalian tympanic cavity and auditory ossicles. The Journal of Laryngology and Otology (1948") "According to this theory (Reichert-Gaupp theory), the mammalian stapes is derived from the reptilian columella, the incus from the quadrate and the malleus from the articular (...).[well established][VHOG]") AnnotationAssertion(Annotation( "2012-09-06"^^xsd:string) Annotation( "TAO:0000467") Annotation( "TAO"^^xsd:string) Annotation( "Curator"^^xsd:string) "The presence of an anguloarticular is interpreted as a synapomorphy of the Clupeocephala (Patterson and Rosen, 1977; Arratia, 1999).[TAO]") AnnotationAssertion(Annotation( "TAO") "TAO has a distinct class for articular - in fact we need (at least) 3 classes here - articular, anguloarticular and malleus, arranged into a single VHOG group") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "ZFA:0000467") "articular") AnnotationAssertion( ) AnnotationAssertion( "AAO:0000028") AnnotationAssertion( "EFO:0003530") AnnotationAssertion( "TAO:0000467") AnnotationAssertion( "VHOG:0000690") AnnotationAssertion( "ZFA:0000467") AnnotationAssertion(Annotation( "TAO:0000467") "angulo-articular") AnnotationAssertion(Annotation( "ZFA:0000467") "anguloarticular") AnnotationAssertion(Annotation( "VHOG:0000690") "anguloarticular - malleus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "AAO:0000028") "angulaire") AnnotationAssertion(Annotation( "AAO:0000028") "angulare") AnnotationAssertion(Annotation( "AAO:0000028") "dermarticulare") AnnotationAssertion(Annotation( "AAO:0000028") "goniale") AnnotationAssertion(Annotation( "AAO:0000028") "operculo angulaire") AnnotationAssertion( "UBERON:0004744") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "articular/anguloarticular") SubClassOf(Annotation( "ZFA"^^xsd:string) ) SubClassOf( ) SubClassOf(Annotation( "ZFA"^^xsd:string) ) SubClassOf(Annotation( "ZFA-modifed") Annotation( "cjm"^^xsd:string) ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) SubClassOf(Annotation( "ZFA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (parasphenoid) AnnotationAssertion(Annotation( ) "A tooth- or denticle-covered plate which is attached to the sphenoid stem[Palaeos].") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0000385") Annotation( "AAO"^^xsd:string) Annotation( "AAO:LAP"^^xsd:string) "Azygous, dermal bone of intramembranous origin that underlies the ventral surface of the braincase in anurans and salamanders. In caecilians, the parasphenoid and other bones are fused to form the Os basale.[AAO]") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0000561") Annotation( "TAO"^^xsd:string) Annotation( "TAO:GA_TG") "Dermal bone that forms part of the base of the skull and the lateral walls of the braincase through its ascending processes. It may articulate with the vomer anteriorly, the prootics and exoccipitals laterally, and the basioccipital posteriorly. The parasphenoid is an elongate median bone.[TAO]") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0000561") Annotation( "TAO"^^xsd:string) "relationship loss: overlaps parasphenoid-basioccipital joint (TAO:0001832)[TAO]") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0000561") Annotation( "TAO"^^xsd:string) "relationship loss: overlaps parasphenoid-pterosphenoid joint (TAO:0002217)[TAO]") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0000385") Annotation( "AAO"^^xsd:string) "relationship loss: part_of braincase and otic capsule skeleton (AAO:0000052)[AAO]") AnnotationAssertion( "AAO:0000385") AnnotationAssertion( "TAO:0000561") AnnotationAssertion( "ZFA:0000561") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "AAO:0000385") "keilbein") AnnotationAssertion(Annotation( "AAO:0000385") "os parasphenoidale") AnnotationAssertion(Annotation( "AAO:0000385") "os sphenoideum") AnnotationAssertion(Annotation( "AAO:0000385") "parabasale") AnnotationAssertion( "UBERON:0004745") AnnotationAssertion(rdfs:label "parasphenoid") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "ZFA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "ZFA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "ZFA-modified"^^xsd:string) ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) # Class: (prootic bone) AnnotationAssertion(Annotation( "AAO:0000514") "Paired, endochondral bones forming the anterior, and lateral walls of the otic capsules.") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0000575") Annotation( "TAO"^^xsd:string) Annotation( "TAO:GA_TG") "Endochondral bone that sutures with the pterosphenoid anteriorly, the sphenotic and pterotic dorsally, the parasphenoid ventrally, the basioccipital postero-ventrally, the exoccipital posteriorly, and occasionally, with the intercalar posteriorly. The dorsal edge of the prootic contributes to the hyomandibular facet. The prootic bears foramina that accommodate branches of the trigeminal and facial nerves. The prootic is a paired bone.[TAO]") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0000575") Annotation( "TAO"^^xsd:string) "relationship loss: develops_from basal plate cartilage (TAO:0001425)[TAO]") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0000575") Annotation( "TAO"^^xsd:string) "relationship loss: overlaps orbitosphenoid-prootic joint (TAO:0001794)[TAO]") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0000575") Annotation( "TAO"^^xsd:string) "relationship loss: overlaps prootic-exoccipital joint (TAO:0002034)[TAO]") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0000575") Annotation( "TAO"^^xsd:string) "relationship loss: overlaps prootic-pterosphenoid joint (TAO:0002033)[TAO]") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0000575") Annotation( "TAO"^^xsd:string) "relationship type change: overlaps neurocranium (TAO:0001580) CHANGED TO: develops_from neurocranium (UBERON:0001703)[TAO]") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0000575") Annotation( "TAO"^^xsd:string) "relationship type change: overlaps neurocranium (TAO:0001580) CHANGED TO: part_of neurocranium (UBERON:0001703)[TAO]") AnnotationAssertion( "AAO:0000514") AnnotationAssertion( "EFO:0003542") AnnotationAssertion( "TAO:0000575") AnnotationAssertion( "ZFA:0000575") AnnotationAssertion(Annotation( "AAO:0000514") "prootic") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "TAO:0000575") Annotation( ) "prootics") AnnotationAssertion( "UBERON:0004746") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "prootic bone") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (supraoccipital bone) AnnotationAssertion(Annotation( "TAO:0000595") "Endochondral bone that is located at the dorsal part of the occipital region of the cranium or the dorso-posterior part of the skull[TAP,modified].") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0000595") Annotation( "TAO"^^xsd:string) Annotation( "TAO:GA_TG") "Endochondral bone that is located at the dorsal part of the occipital region of the cranium or the dorso-posterior part of the skull. It forms the dorsal margin of the foramen magnum. Commonly the supraoccipital articulates with the parietals anteriorly, the epiotics laterally, and the exoccipitals posteroventrally. The supraoccipital is an unpaired median bone.[TAO]") AnnotationAssertion(Annotation( "2012-09-06"^^xsd:string) Annotation( ) "The supraoccipital ties the occiput to the dermal skull table.[Palaeos]") AnnotationAssertion(Annotation( "2012-09-06"^^xsd:string) Annotation( ) "a bone on the dorsal side of the great foramen of the skull, usually forming a part of the occipital in the adult, but distinct in the young..[TFD]") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0000595") Annotation( "TAO"^^xsd:string) "relationship loss: overlaps supraoccipital-parietal joint (TAO:0005264)[TAO]") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0000595") Annotation( "TAO"^^xsd:string) "relationship type change: overlaps neurocranium (TAO:0001580) CHANGED TO: part_of neurocranium (UBERON:0001703)[TAO]") AnnotationAssertion(Annotation( ) "See Kardong KV, Vertebrates: Comparative Anatomy, Function, Evolution, Fourth Edition (2006) McGraw-Hill, p.237 Table 7.1; usually forming a part of the occipital in the adult, but distinct in the young") AnnotationAssertion( "UBERON:0005237") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:36618") AnnotationAssertion( "MA:0001474") AnnotationAssertion( "TAO:0000595") AnnotationAssertion( "VHOG:0001150") AnnotationAssertion( "ZFA:0000595") AnnotationAssertion(Annotation( "VHOG:0001150") "supraoccipital") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004747") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "supraoccipital bone") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete autopalatine) AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0000372") Annotation( "AAO"^^xsd:string) Annotation( "AAO:LAP"^^xsd:string) "Sliver of bone that invest part of or all the posterior aspect of each antorbital plane.[AAO]") AnnotationAssertion(Annotation( "2012-08-08") Annotation( "ZFA:0000620") Annotation( "ZFA") Annotation( "ZFIN:curator"^^xsd:string) "The cartilaginous autopalatine forms from the anterior palatoquadrate arch. The first sign of ossification is visible at the anterior tip where it articulates with the maxilla (7.6 mm). In adults there are three processes at the anterior portion of the palatine: a ventromedial process, which forms the socket of the small ball- and- socket joint with the preethmoid; a dorsomedial process, which is connected by a short ligament to the ethmoid; and a lateral process, which extends toward the first infraorbital. Possession of a dorsomedial process, which abuts the ethmoid, is a unique feature shared by Cypriniformes (Fink and Fink, 1981). The palatine has two components, the autopalatine (derived from pars autopalatine) and the dermal component having teeth, the dermopalatine Arratia & Schultze 1990. The element in cypriniforms is only the cartilage part, so that it is more correct to name it autopalatine and not as palatine in general that it implies a fusion of elements (as in perciforms).[ZFA]") AnnotationAssertion( "AAO:0000372") AnnotationAssertion( "ZFA:0000620") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004748") AnnotationAssertion(rdfs:label "obsolete autopalatine") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (blastodisc) AnnotationAssertion(Annotation( ) "A small, circular, white spot (approximately 2-3 mm across) on the surface of the yellow yolk of an egg that has been laid. The nucleus of the egg is in the germinal disc.") AnnotationAssertion( ) AnnotationAssertion( "AAO:0000043") AnnotationAssertion( "BTO:0000494") AnnotationAssertion( "BTO:0001504") AnnotationAssertion( "NCIT:C34150") AnnotationAssertion( "TAO:0001175") AnnotationAssertion( "ZFA:0001175") AnnotationAssertion(Annotation( ) "germinal disc") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0000494") "embryonic disc") AnnotationAssertion(Annotation( "BTO:0000494") "gastrodisk") AnnotationAssertion(Annotation( "BTO:0000494") "germ disc") AnnotationAssertion( "UBERON:0004749") AnnotationAssertion(rdfs:label "blastodisc") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (blastoderm) AnnotationAssertion(Annotation( ) "A layer of cells formed at one pole of macrolecithal eggs such as the yolky egg of birds. The yolk prevents the division from taking place through the egg, resulting in meroblastic cleavage during the many cleavage divisions. At the animal pole (containing less yolk than the vegetal pole), the zygote divides and subdivides, forming the blastoderm, which gradually spreads around the yolk and forms the embryo. The blastoderm is composed of two layers, the epiblast and the hypoblast, which enclose the fluid-filled blastocoel cavity.") AnnotationAssertion( ) AnnotationAssertion( "AAO:0000042") AnnotationAssertion( "BTO:0000126") AnnotationAssertion( "MESH:A16.254.085.067") AnnotationAssertion( "TAO:0001176") AnnotationAssertion( "ZFA:0001176") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0000126") "germinal membrane") AnnotationAssertion(Annotation( "BTO:0000126") "membrana germinativa") AnnotationAssertion( "UBERON:0004750") AnnotationAssertion(rdfs:label "blastoderm") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (hypohyal bone) AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0000958") Annotation( "AAO"^^xsd:string) Annotation( "AAO:LAP"^^xsd:string) "Paired element that articulates anterioly with the basihyal and posteriorly with the ceratohyal hypohyals.[AAO]") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0001381") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "Replacement bone that is bilaterally paired and articulates with the anterior ceratohyal posteriorly.[TAO]") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0000958") Annotation( "AAO"^^xsd:string) "relationship loss: part_of hyoid apparatus skeleton (AAO:0000682)[AAO]") AnnotationAssertion( "AAO:0000958") AnnotationAssertion( "TAO:0001381") AnnotationAssertion( "ZFA:0001381") AnnotationAssertion(Annotation( "ZFA:0001381") Annotation( ) "hypohyals") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004751") AnnotationAssertion(rdfs:label "hypohyal bone") SubClassOf(Annotation( "TAO"^^xsd:string) ) SubClassOf( ) SubClassOf(Annotation( "AAO"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "TAO"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "TAO"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (scapulocoracoid) AnnotationAssertion(Annotation( ) Annotation( ) Annotation( ) Annotation( "VSAO:0005002") "Skeletal element that consists of the scapula and the coracoid[VSAO, modified].") AnnotationAssertion( "todo - decide whether to create separate classes for cartilage & ossified. Wikipedia considers this absent in Therians, but if considered as a grouping of scapula and coracoid then it would be present") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0000781") Annotation( "AAO"^^xsd:string) Annotation( "AAO:LAP"^^xsd:string) "Fused, ossified portions of the scapula, procoracoid, and coracoid.[AAO]") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0001455") Annotation( "TAO"^^xsd:string) Annotation( "TAO:GA_TG") Annotation( "ZFIN:curator"^^xsd:string) "Pectoral fin cartilage that consists of a paired cartilaginous plate of the embryonic primary pectoral girdle and from which the scapular and coracaoid bones ossify.[TAO]") AnnotationAssertion(Annotation( "2012-09-10") Annotation( ) "either a fusion of the scapula and coracoid (the two main bones of the shoulder girdle), or the scapula & coracoid considered as a single structural unit.[Palaeos]") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0000781") Annotation( "AAO"^^xsd:string) "relationship loss: part_of scapular area (AAO:0000935)[AAO]") AnnotationAssertion(Annotation( "ZFA"^^xsd:string) "ZFA defines as precursor to scapula and coracoid. Cartilage in TAO") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0000781") AnnotationAssertion( "TAO:0001455") AnnotationAssertion( "VSAO:0005002") AnnotationAssertion( "ZFA:0001455") AnnotationAssertion(Annotation( "VSAO:0005002") "scapulocoracoideum") AnnotationAssertion(Annotation( "ZFA:0001455") "coraco-scapular cartilage") AnnotationAssertion(Annotation( "TAO:0001455") "scapulo-coracoid cartilage") AnnotationAssertion(Annotation( "TAO:0001455") "scapulocoracoid cartilage") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004753") AnnotationAssertion(rdfs:label "scapulocoracoid") SubClassOf( ) SubClassOf(Annotation( "VSAO"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (foramen ovale of heart) AnnotationAssertion(Annotation( ) "An anatomical space in the fetal heart that allows blood to enter the left atrium from the right atrium.") AnnotationAssertion( "In most individuals, the foramen ovale closes at birth. It later forms the fossa ovalis") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0004142") AnnotationAssertion( "EMAPA:18244") AnnotationAssertion( "FMA:86043") AnnotationAssertion( "MA:0001873") AnnotationAssertion( "NCIT:C34241") AnnotationAssertion(Annotation( "ncithesaurus:Oval_Foramen") "UMLS:C0016521") AnnotationAssertion( "galen:ForamenOvaleCordis") AnnotationAssertion(Annotation( "FMA:86043") "Bottalo's foramen") AnnotationAssertion(Annotation( ) "falx septi") AnnotationAssertion(Annotation( "galen:ForamenOvaleCordis") "foramen ovale cordis") AnnotationAssertion(Annotation( ) "ostium secundum of Born") AnnotationAssertion(Annotation( "MA:0001873") Annotation( "galen:ForamenOvale") "foramen ovale") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004754") AnnotationAssertion(rdfs:comment "It is one of two fetal cardiac shunts, the other being the ductus arteriosus (which allows blood that still escapes to the right ventricle to bypass the pulmonary circulation). Another similar adaptation in the fetus is the ductus venosus[WP]") AnnotationAssertion(rdfs:label "foramen ovale of heart") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses( ) # Class: (skeletal tissue) AnnotationAssertion(Annotation( ) Annotation( ) Annotation( "GO_REF:0000034"^^xsd:string) Annotation( "PSPUB:0000170"^^xsd:string) Annotation( "VSAO:0000015") "A specialized form of connective tissue in which the extracellular matrix is firm, providing the tissue with resilience, and/or mineralized and that functions in mechanical and structural support.[VSAO].") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "VSAO:0000015") Annotation( "taken from version of VSAO used in TAO and used directly in Uberon") Annotation( "VSAO"^^xsd:string) Annotation( "GO_REF:0000034, http://dx.plos.org/10.1371/journal.pone.0051070") Annotation( "PSPUB:0000170"^^xsd:string) "A specialized form of connective tissue in which the extracellular matrix is firm, providing the tissue with resilience, and/or mineralized and that functions in mechanical and structural support.[VSAO]") AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37744") AnnotationAssertion( "MA:0003047") AnnotationAssertion( "VSAO:0000015") AnnotationAssertion( "XAO:0004038") AnnotationAssertion( "ZFA:0005619") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004755") AnnotationAssertion(rdfs:comment "Four classes of mineralized tissues are found in vertebrates: bone, cartilage, dentine, and enamel. We think of cartilage and bone as skeletal tissues and of enamel and dentine as dental tissues, but enamel and dentine arose evolutionarily together with bone as skeletal tissues in the dermal skeleton (exoskeleton) of early vertebrates. Scales and teeth of sharks are examples of dermal skeletal elements that are still composed of the three ancient components-enamel, dentine, and bone. Cartilage, on the other hand, provided the basis for the second vertebrate skeletal system, the endoskeleton (Smith and Hall, 1990; Hall, 1998a,b). some invertebrate skeletal tissues have surprisingly bone-like features. Examples include chondrocytes interconnected by cell processes in cephalopod cartilages (Cole and Hall, 2004a,b), and the calcium phosphate layer in the shells of brachiopods (Rodland et al., 2003). However, neither bone nor mineralized cartilage have been found in invertebrates. Editors notes: TODO - develops_from") AnnotationAssertion(rdfs:label "skeletal tissue") SubClassOf(Annotation( "VSAO"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "2012-08-14"^^xsd:string) Annotation( "VSAO:0000015") Annotation( "VSAO"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (dermal skeletal element) AnnotationAssertion(Annotation( ) Annotation( ) "Dermis-derived entity that is made of skeletal tissue.") AnnotationAssertion(Annotation( "VSAO:curator"^^xsd:string) "dermal element") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004756") AnnotationAssertion(rdfs:label "dermal skeletal element") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (gland of anal canal) AnnotationAssertion(Annotation( ) Annotation( "OBOL:automatic"^^xsd:string) "A gland that is part of an anal canal [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:27221") AnnotationAssertion( "EMAPA:27233") AnnotationAssertion( "EMAPA:27543") AnnotationAssertion( "FMA:15720") AnnotationAssertion( "FMA:15724") AnnotationAssertion( "NCIT:C32068") AnnotationAssertion(Annotation( "ncithesaurus:Anal_Gland") "UMLS:C0162322") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "gland of anal canal") AnnotationAssertion( "uberon") AnnotationAssertion( "anal gland") AnnotationAssertion(Annotation( ) Annotation( ) "anal sac") AnnotationAssertion( "gland of anus") AnnotationAssertion( "rectal gland") AnnotationAssertion( "UBERON:0004760") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "gland of anal canal") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (cartilaginous neurocranium) AnnotationAssertion(Annotation( ) "The primitive cartilagionous skeletal structure of the fetal skull that grows to envelop the rapidly growing embyonic brain. In humans, the chondrocranium begins forming at 28 days from mesenchymal condensations and is fully formed between week 7 and 9 of fetal development. While the majority of the chondrocranium is succeeded by the bony skull in most higher vertebrates, some components do persist into adulthood.[1] In Cartilagious fishes and Agnathans, the chondrocranium persist throughout life.[2] Embryologically, the chondrocranium represent the basal cranial structure, and lay the base for the formation of the endocranium in higher vertebrates[WP].") AnnotationAssertion(Annotation( "FMA"^^xsd:string) "in contrast to chondrocranium, this structure is entirely cartiliginous. In Chondricthyes this is the same as the neurocranium. FMA:76621 is an undefined fetal structure, so we assume the correct placement is here. Note that this is distinct from MA:0000317 which is the uberon:neurocranium (the part of the cranium that encloses the brain)") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0000094") AnnotationAssertion( "AAO:0010153") AnnotationAssertion( "EHDAA:6031") AnnotationAssertion( "FMA:76621") AnnotationAssertion( "NCIT:C34121") AnnotationAssertion(Annotation( "ncithesaurus:Chondrocranium") "UMLS:C1516496") AnnotationAssertion( "XAO:0003059") AnnotationAssertion( "cartilaginous chondocranium") AnnotationAssertion( "cartiligionous skeletal structure of skull") AnnotationAssertion( "uberon") AnnotationAssertion( "cartilaginous skull") AnnotationAssertion(Annotation( ) "chondocranium") AnnotationAssertion( "embryonic chondocranium") AnnotationAssertion(Annotation( ) "neurocranium") AnnotationAssertion( "UBERON:0004761") AnnotationAssertion(rdfs:label "cartilaginous neurocranium") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "PMC1571569") ObjectSomeValuesFrom( )) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (endochondral bone tissue) AnnotationAssertion(Annotation( ) Annotation( "GO:0001958") Annotation( "VSAO:0000145") "Replacement bone tissue that forms within cartilage[VSAO, modified].") AnnotationAssertion(Annotation( "MA"^^xsd:string) "the distinction between endochondral bone and endochondral bone tissue. Some bones may be a mixture of both tissue types. The MA class most likely refers to a tissue type") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:35304") AnnotationAssertion( "MA:0002836") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004763") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "endochondral bone tissue") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses( ) # Class: (intramembranous bone tissue) AnnotationAssertion(Annotation( ) Annotation( "GO:0001957") "Bone tissue that forms directly within mesenchyme, and does not replace other tissues[TAO]. Intramembranous ossification is the formation of bone in which osteoblasts secrete a collagen-proteoglycan matrix that binds calcium salts and becomes calcified[GO]. Intramembranous ossification is the way flat bones and the shell of a turtle are formed[GO]. Unlike endochondral ossification, cartilage is not present during intramembranous ossification[WP].") AnnotationAssertion(Annotation( "MA"^^xsd:string) "note the distinction between intramembranous bone and intramembranous bone tissue. Some bones may be a mixture of both tissue types. The MA class most likely refers to a tissue type (it is under bone tissue and connective tissue; there are no child classes)") AnnotationAssertion( ) AnnotationAssertion( "MA:0002837") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004764") AnnotationAssertion(rdfs:label "intramembranous bone tissue") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (skeletal element) AnnotationAssertion(Annotation( ) "Organ consisting of skeletal tissue. Encompasses whole bones, fused bones, cartilaginious elements, teeth, dermal denticles.") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "VSAO:0000128") Annotation( "VSAO"^^xsd:string) Annotation( "PSPUB:0000170"^^xsd:string) "Organ entity that is typically involved in mechanical support and may have different skeletal tissue compositions at different stages.[VSAO]") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0001890") Annotation( "TAO"^^xsd:string) Annotation( "TAO:VSAO_workshop") "Organ entity that may have different tissue compositions at different stages and is typically involved in mechanical support.[TAO]") AnnotationAssertion( "AAO:0011129") AnnotationAssertion( "TAO:0001890") AnnotationAssertion( "VSAO:0000128") AnnotationAssertion( "XAO:0004012") AnnotationAssertion( "ZFA:0005494") AnnotationAssertion( "galen:SkeletalStructure") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004765") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "skeletal element") SubClassOf( ) SubClassOf(Annotation( "VSAO"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (cranial bone) AnnotationAssertion(Annotation( "UBERON:automatic") "A bone that is part of a cranium.") AnnotationAssertion( "here cranium = skull - mandible") AnnotationAssertion( ) AnnotationAssertion(Annotation( "UBERON:automatic") "cranium bone") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004766") AnnotationAssertion(rdfs:label "cranial bone") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (vomerine tooth) AnnotationAssertion(Annotation( ) "A tooth that is on the vomer.") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0001631") Annotation( "TAO"^^xsd:string) Annotation( "TAO:wd"^^xsd:string) "Tooth that is attached to the vomer.[TAO]") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0001631") Annotation( "TAO"^^xsd:string) "relationship type change: OBO_REL:part_of vomer (TAO:0000308) CHANGED TO: attaches_to vomer (UBERON:0002396)[TAO]") AnnotationAssertion( "AAO:0000635") AnnotationAssertion( "TAO:0001631") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004767") AnnotationAssertion(rdfs:label "vomerine tooth") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (bone of lower jaw) AnnotationAssertion(Annotation( ) "Any bone that is part of the lower jaw skeleton. This includes (when present): the dentary/mandible, the articular, the splenial, the suprangular.") AnnotationAssertion( "Do not manually classify under here - bones are automatically classified") AnnotationAssertion( "lower jaw bone") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004768") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "bone of lower jaw") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (diaphysis) AnnotationAssertion(Annotation( ) Annotation( "FMA:24013") "Subdivision of long bone which forms the part of the bone between the two epiphyses, excluding the metaphyses[FMA,modified].") AnnotationAssertion(Annotation( "FMA:24013") "Subdivision of long bone which forms the part of the bone between the two epiphyses; together with other the subdivisions of long bone, it constitutes the long bone. Examples: diaphysis of humerus, diaphysis of femur[FMA].") AnnotationAssertion(Annotation( "FMA:24013, Wikipedia:Diaphysis") "The main or mid section (shaft) of a long bone. It is made up of cortical bone and usually contains bone marrow and adipose tissue (fat)[WP][FMA:24013, Wikipedia:Diaphysis].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:35504") AnnotationAssertion( "FMA:24013") AnnotationAssertion( "GAID:189") AnnotationAssertion( "MESH:D018483") AnnotationAssertion( "body of long bone") AnnotationAssertion( "long bone diaphysis") AnnotationAssertion( "shaft of long bone") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004769") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "diaphysis") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/9/94/Illu_long_bone.jpg"^^xsd:anyURI) SubClassOf( ) # Class: (articular system) AnnotationAssertion(Annotation( "VSAO:0000181") "Anatomical system that consists of all the joints of the body.") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:35150") AnnotationAssertion( "FMA:23878") AnnotationAssertion( "MA:0003007") AnnotationAssertion( "VSAO:0000181") AnnotationAssertion(Annotation( "FMA:23878") "joint system") AnnotationAssertion(Annotation( "FMA:23878") "set of all joints of body") AnnotationAssertion( "uberon") AnnotationAssertion( "set of all joints") AnnotationAssertion(Annotation( "FMA:23878") "set of joints of body") AnnotationAssertion( "UBERON:0004770") AnnotationAssertion(rdfs:label "articular system") SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (posterior nasal aperture) AnnotationAssertion(Annotation( ) Annotation( "AAO:0000093") "Opening/conduit between the nasal cavity and the nasopharynx[AAO] The choanae are separated by the vomer[WP].") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000545") Annotation( "VHOG"^^xsd:string) Annotation( ) "One of the paired openings from the nasal cavities into the pharynx. [Bemis_WE, Functional_Anatomy_of_the_Vertebrates:_An_Evolutionary_Perspective, Glossary_G-6, Grande_L, Liem_KF, Third_Edition_(2001)_Orlando_Fla.:_Harcourt_College_Publishers, Walker_WF][VHOG]") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0000093") Annotation( "AAO"^^xsd:string) Annotation( "AAO:LAP"^^xsd:string) "Opening between the nasal cavity and the nasopharynx.[AAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000545") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "DOI:10.1038/nature02843 Zhu M, Ahlberg PE, The origin of the internal nostril in tetrapodes. Nature (2004)") "The choana, a unique 'internal nostril' opening from the nasal sac into the roof of the mouth, is a key part of the tetrapod (land vertebrate) respiratory system. It was the first component of the tetrapod body plan to evolve, well before the origin of limbs, and is therefore crucial to our understanding of the beginning of the fish-tetrapod transition. (...) Here we present new material of Kenichthys, a 395-million-year-old fossil fish from China, that provides direct evidence for the origin of the choana and establishes its homology: it is indeed a displaced posterior external nostril that, during a brief transitional stage illustrated by Kenichthys, separated the maxilla from the premaxilla.[well established][VHOG]") AnnotationAssertion(Annotation( "WP"^^xsd:string) "Fish don't have choanae, instead they have two pairs of external nostrils") AnnotationAssertion( "In addition to tetrapods, the lungfish has internal nostrils too. In tetrapods the exhalant nostril (choana) empties into the buccal cavity.") AnnotationAssertion(Annotation( ) Annotation( "XAO:0000277") "choana") AnnotationAssertion(Annotation( "MA:0001323") "internal naris") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0000093") AnnotationAssertion( "EHDAA2:0000242") AnnotationAssertion( "EHDAA:7842") AnnotationAssertion( "EMAPA:17849") AnnotationAssertion( "FMA:53143") AnnotationAssertion( "MA:0001323") AnnotationAssertion( "VHOG:0000545") AnnotationAssertion( "XAO:0000277") AnnotationAssertion(Annotation( "XAO:0000277") "posterior nasal apperture") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "VHOG:0000545") Annotation( ) "choanae") AnnotationAssertion( "nasopharyngeal naris") AnnotationAssertion(Annotation( "HP:0004496") "posterior choana") AnnotationAssertion(Annotation( "VHOG:0000545") "posterior naris") AnnotationAssertion( "UBERON:0004771") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "posterior nasal aperture") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/8/87/Gray855.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (eyelid tarsus) AnnotationAssertion(Annotation( ) "The tarsi (tarsal plates) are two comparatively thick, elongated plates of dense connective tissue, about 2.5 cm. in length; one is found in each eyelid, and contributes to its form and support. They directly abut the lid margins.") AnnotationAssertion(Annotation( ) "In most taxa (birds, mammals, lizards), the tarsal plate is described as a dense, fibrous connective tissue, possibly including cartilage, present within one or both of the upper and lower eyelids (Gau- thier et al., 1988; Rieppel, 2000). In humans, the tarsal plate of the upper eyelid is composed of collagens types I, III, and V, as well as glycosaminogly- cans (chondroitin sulphate 4 and 6), aggrecan, and cartilage oligomeric matrix proteins but lacks collagen type II as well as chondrocytes (Milz et al., 2005). Thus, for humans, the upper tarsal plate represents neither a truly fibrous nor a truly cartilagi- nous element but instead one that is composed of a unique transitional tissue (Milz et al., 2005). In many birds, lizards, and Sphenodon (the tuatara), the upper eyelid has lim- ited mobility and a putative tarsal plate is instead found within the lower eyelid (Underwood, 1970; Gau- thier et al., 1988).") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:59086") AnnotationAssertion( "MA:0000270") AnnotationAssertion( "NCIT:C33736") AnnotationAssertion(Annotation( "ncithesaurus:Tarsal_Plate") "UMLS:C0459586") AnnotationAssertion(Annotation( "FMA:59086") "tarsal plate") AnnotationAssertion(Annotation( "FMA:59086") "tarsal plate of eyelid") AnnotationAssertion(Annotation( ) "tarsus palpebralis") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "eyelid tarsi") AnnotationAssertion(Annotation( ) "tarsi") AnnotationAssertion( "UBERON:0004772") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "eyelid tarsus") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ) SubClassOf(Annotation( "cjm"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (superior eyelid tarsus) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An eyelid tarsus that is part of a upper eyelid [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37607") AnnotationAssertion( "FMA:59087") AnnotationAssertion( "MA:0001260") AnnotationAssertion(Annotation( "FMA:59087") "superior tarsal plate") AnnotationAssertion(Annotation( "FMA:59087") "superior tarsus") AnnotationAssertion( "superior tarsus of eyelid") AnnotationAssertion(Annotation( "FMA:59087") "tarsal plate of upper eyelid") AnnotationAssertion( "tarsus of upper eyelid") AnnotationAssertion(Annotation( "FMA:59087") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "tarsus superior") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004773") AnnotationAssertion(rdfs:label "superior eyelid tarsus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (inferior eyelid tarsus) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An eyelid tarsus that is part of a lower eyelid [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37606") AnnotationAssertion( "FMA:59088") AnnotationAssertion( "MA:0001257") AnnotationAssertion(Annotation( "FMA:59088") "inferior tarsal plate") AnnotationAssertion(Annotation( "FMA:59088") "inferior tarsus") AnnotationAssertion( "inferior tarsus of eyelid") AnnotationAssertion(Annotation( "FMA:59088") "tarsal plate of lower eyelid") AnnotationAssertion(Annotation( "FMA:59088") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "tarsus inferior") AnnotationAssertion( "tarsus of lower eyelid") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004774") AnnotationAssertion(rdfs:label "inferior eyelid tarsus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (outer renal medulla vasa recta) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A vasa recta that is part of a outer medulla of kidney [Automatically generated definition].") AnnotationAssertion( "EMAPA:36560") AnnotationAssertion( "MA:0002597") AnnotationAssertion(Annotation( "MP:0011330") "kidney outer medulla vasa recta") AnnotationAssertion(Annotation( "MP:0011330") "kidney outer renal medulla vasa recta") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "outer medulla of kidney vasa recta") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "outer zone of medulla of kidney vasa recta") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "outer zone of renal medulla vasa recta") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "vasa recta of outer medulla of kidney") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "vasa recta of outer renal medulla") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "vasa recta of outer zone of medulla of kidney") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "vasa recta of outer zone of renal medulla") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004775") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "outer renal medulla vasa recta") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (inner renal medulla vasa recta) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A vasa recta that is part of a inner medulla of kidney [Automatically generated definition].") AnnotationAssertion( "EMAPA:36559") AnnotationAssertion( "MA:0002596") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "inner medulla of kidney vasa recta") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "inner zone of medulla of kidney vasa recta") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "inner zone of renal medulla vasa recta") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "set of inner region of renal pyramids vasa recta") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "vasa recta of inner medulla of kidney") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "vasa recta of inner renal medulla") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "vasa recta of inner zone of medulla of kidney") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "vasa recta of inner zone of renal medulla") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "vasa recta of set of inner region of renal pyramids") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004776") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "inner renal medulla vasa recta") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (respiratory system submucosa) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A submucosa that is part of a respiratory system [Automatically generated definition].") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37578") AnnotationAssertion( "MA:0001822") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "apparatus respiratorius submucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "submucosa of apparatus respiratorius") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "submucosa of respiratory system") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004777") AnnotationAssertion(rdfs:label "respiratory system submucosa") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (larynx submucosa) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A submucosa that is part of a larynx [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:35474") AnnotationAssertion( "FMA:321584") AnnotationAssertion( "MA:0002728") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "submucosa of larynx") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "EMAPA:35474") "laryngeal submucosa") AnnotationAssertion( "UBERON:0004778") AnnotationAssertion(rdfs:label "larynx submucosa") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (respiratory system lamina propria) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A lamina propria that is part of a respiratory system [Automatically generated definition].") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37576") AnnotationAssertion( "MA:0001821") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "apparatus respiratorius lamina propria") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "apparatus respiratorius lamina propria mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "lamina propria mucosa of apparatus respiratorius") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "lamina propria mucosa of respiratory system") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "lamina propria of apparatus respiratorius") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "lamina propria of respiratory system") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "respiratory system lamina propria mucosa") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004779") AnnotationAssertion(rdfs:label "respiratory system lamina propria") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (gastrointestinal system lamina propria) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A lamina propria that is part of a gastrointestinal system.") AnnotationAssertion( ) AnnotationAssertion( "MA:0001899") AnnotationAssertion( "NCIT:C49299") AnnotationAssertion(Annotation( "ncithesaurus:Gastrointestinal_Tract_Lamina_Propria") "UMLS:C1708197") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004780") AnnotationAssertion(rdfs:label "gastrointestinal system lamina propria") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (gall bladder lamina propria) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A lamina propria that is part of a gallbladder [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:35371") AnnotationAssertion( "FMA:278594") AnnotationAssertion( "MA:0001633") AnnotationAssertion( "NCIT:C49228") AnnotationAssertion(Annotation( "ncithesaurus:Gallbladder_Lamina_Propria") "UMLS:C1708175") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "gall bladder lamina propria mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "gallbladder lamina propria") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "gallbladder lamina propria mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "lamina propria mucosa of gall bladder") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "lamina propria mucosa of gallbladder") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "lamina propria of gall bladder") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "lamina propria of gallbladder") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "MA:0001633") "biliary lamina propria") AnnotationAssertion( "UBERON:0004781") AnnotationAssertion(rdfs:label "gall bladder lamina propria") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (gastrointestinal system serosa) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A serous membrane that is part of a digestive system [Automatically generated definition].") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37592") AnnotationAssertion( "MA:0001522") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "digestive system serosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "digestive system serous membrane") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "gastrointestinal system serous membrane") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "serosa of digestive system") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "serosa of gastrointestinal system") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "serous membrane of digestive system") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "serous membrane of gastrointestinal system") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004782") AnnotationAssertion(rdfs:label "gastrointestinal system serosa") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (gall bladder serosa) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A serous membrane that is part of a gallbladder [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:35372") AnnotationAssertion( "FMA:14659") AnnotationAssertion( "MA:0001634") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "gall bladder serous membrane") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "gallbladder serosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "gallbladder serous membrane") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "serosa of gall bladder") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "serosa of gallbladder") AnnotationAssertion(Annotation( "FMA:14659") "serous coat of gallbladder") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "serous membrane of gall bladder") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "serous membrane of gallbladder") AnnotationAssertion(Annotation( "FMA:14659") "tunica serosa (vesica biliaris)") AnnotationAssertion(Annotation( "FMA:14659") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "tunica serosa vesicae biliaris") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "MA:0001634") "biliary serosa") AnnotationAssertion( "UBERON:0004783") AnnotationAssertion(rdfs:label "gall bladder serosa") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (heart ventricle wall) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An anatomical wall that is part of a cardiac ventricle [Automatically generated definition].") AnnotationAssertion( "FMA:13884") AnnotationAssertion( "MA:0002791") AnnotationAssertion( "NCIT:C119295") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "anatomical wall of cardiac ventricle") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "anatomical wall of heart ventricle") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "anatomical wall of lower chamber of heart") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "anatomical wall of ventricle of heart") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "cardiac ventricle anatomical wall") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "cardiac ventricle wall") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "heart ventricle anatomical wall") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "lower chamber of heart anatomical wall") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "lower chamber of heart wall") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "ventricle of heart anatomical wall") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "ventricle of heart wall") AnnotationAssertion(Annotation( "FMA:13884") "ventricular wall") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "wall of cardiac ventricle") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "wall of heart ventricle") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "wall of lower chamber of heart") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "wall of ventricle of heart") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "MA:0002791") "wall of ventricle") AnnotationAssertion( "UBERON:0004784") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "heart ventricle wall") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (respiratory system mucosa) AnnotationAssertion(Annotation( "MESH:A04.760") Annotation( "MGI:cwg"^^xsd:string) Annotation( "MP:0002277") "The mucous membrane lining the respiratory tract.") AnnotationAssertion( "TODO - split respiratory tract mucosa from respiratory system mucosa") AnnotationAssertion( "BTO:0000973") AnnotationAssertion( "EMAPA:18334") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37577") AnnotationAssertion( "FMA:302092") AnnotationAssertion( "GAID:304") AnnotationAssertion( "MA:0001827") AnnotationAssertion( "MESH:D020545") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "apparatus respiratorius mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "apparatus respiratorius mucosa of organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "apparatus respiratorius mucous membrane") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of apparatus respiratorius") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of organ of apparatus respiratorius") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of organ of respiratory system") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of respiratory system") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucous membrane of apparatus respiratorius") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucous membrane of respiratory system") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "respiratory system mucosa of organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "respiratory system mucous membrane") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "EMAPA:18334") "laryngeal mucous membrane") AnnotationAssertion(Annotation( "BTO:0000973") "respiratory mucosa") AnnotationAssertion( "respiratory tract mucosa") AnnotationAssertion( "UBERON:0004785") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "respiratory system mucosa") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (gastrointestinal system mucosa) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A mucosa that is part of a gastrointestinal system.") AnnotationAssertion( ) AnnotationAssertion( "BTO:0000546") AnnotationAssertion( "BTO:0005568") AnnotationAssertion( "EMAPA:36591") AnnotationAssertion( "MA:0001521") AnnotationAssertion(Annotation( ) "digestive tract mucosa") AnnotationAssertion(Annotation( "BTO:0000546") "gut mucosa") AnnotationAssertion(Annotation( ) "gut mucuous membrane") AnnotationAssertion(Annotation( ) "mucosa of gut") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004786") AnnotationAssertion(rdfs:comment "The gut mucosa of amphioxus has insulin-secreting cells. http://www.ncbi.nlm.nih.gov/pubmed/16417468") AnnotationAssertion(rdfs:label "gastrointestinal system mucosa") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "BTO-modified") ObjectSomeValuesFrom( )) # Class: (urethra urothelium) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An urothelium that is part of a urethra [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:35896") AnnotationAssertion( "MA:0001687") AnnotationAssertion( "NCIT:C49310") AnnotationAssertion(Annotation( "ncithesaurus:Urethra_Transitional_Cell_Epithelium") "UMLS:C1710585") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "urethra uroepithelium") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "uroepithelium of urethra") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "urothelium of urethra") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004787") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "urethra urothelium") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (kidney pelvis urothelium) AnnotationAssertion(Annotation( "MGI:csmith"^^xsd:string) Annotation( "MP:0011336") "The epithelial lining of the luminal space of the kidney pelvis.") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:28077") AnnotationAssertion( "FMA:263264") AnnotationAssertion( "MA:0002632") AnnotationAssertion( "NCIT:C54556") AnnotationAssertion(Annotation( "ncithesaurus:Renal_Pelvis_Urothelium") "UMLS:C1709899") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "kidney pelvis transitional epithelium") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "kidney pelvis uroepithelium") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "pelvis of ureter uroepithelium") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "pelvis of ureter urothelium") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "renal pelvis transitional epithelium") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "renal pelvis uroepithelium") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "renal pelvis urothelium") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "transitional epithelium of kidney pelvis") AnnotationAssertion(Annotation( "FMA:263264") "transitional epithelium of renal pelvis") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "uroepithelium of kidney pelvis") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "uroepithelium of pelvis of ureter") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "uroepithelium of renal pelvis") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "urothelium of kidney pelvis") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "urothelium of pelvis of ureter") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "urothelium of renal pelvis") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "EMAPA:28077") "pelvic urothelium") AnnotationAssertion( "UBERON:0004788") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "kidney pelvis urothelium") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (larynx mucous gland) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A mucous gland that is part of a larynx [Automatically generated definition].") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37631") AnnotationAssertion( "MA:0001767") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucous gland of larynx") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004789") AnnotationAssertion(rdfs:label "larynx mucous gland") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (skin mucous gland) AnnotationAssertion(Annotation( ) "A mucous gland that is part of the skin.") AnnotationAssertion( "See comments for 'skin mucus'") AnnotationAssertion( "EMAPA:35775") AnnotationAssertion( "MA:0000148") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucous gland of entire skin") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucous gland of skin of body") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "skin mucus gland") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "skin of body mucous gland") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004790") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "skin mucous gland") SubClassOf( ) SubClassOf( ) SubClassOf( ) # Class: (thymus trabecula) AnnotationAssertion(Annotation( "ISBN:0-397-51047-0") Annotation( "MGI:cwg"^^xsd:string) Annotation( "MP:0002370") "The thymic connective tissue which extends into the parenchyma.") AnnotationAssertion( ) AnnotationAssertion( "MA:0002674") AnnotationAssertion( "NCIT:C33773") AnnotationAssertion(Annotation( "ncithesaurus:Thymic_Trabecula") "UMLS:C1515431") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "thymic trabecula") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "thymus gland trabecula") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "trabecula of thymus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "trabecula of thymus gland") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004791") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "thymus trabecula") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "MA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (secretion of endocrine pancreas) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A secretion that is part of a endocrine pancreas [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( "MA:0002517") AnnotationAssertion( "NCIT:C33255") AnnotationAssertion(Annotation( "ncithesaurus:Pancreatic_Endocrine_Secretion") "UMLS:C1518866") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "endocrine pancreas secretion") AnnotationAssertion(Annotation( "ncithesaurus:Pancreatic_Endocrine_Secretion") "pancreatic endocrine secretion") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "pars endocrina pancreatis secretion") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "secretion of pars endocrina pancreatis") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004792") AnnotationAssertion(rdfs:label "secretion of endocrine pancreas") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (secretion of exocrine pancreas) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A secretion that is part of a exocrine pancreas [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( "MA:0002518") AnnotationAssertion( "NCIT:C33256") AnnotationAssertion(Annotation( "ncithesaurus:Pancreatic_Exocrine_Secretion") "UMLS:C1518867") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "exocrine pancreas secretion") AnnotationAssertion(Annotation( "ncithesaurus:Pancreatic_Exocrine_Secretion") "pancreatic exocrine secretion") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "pars exocrina pancreatis secretion") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "secretion of pars exocrina pancreatis") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004793") AnnotationAssertion(rdfs:label "secretion of exocrine pancreas") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (esophagus secretion) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A secretion that is part of a esophagus [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( "FMA:79662") AnnotationAssertion( "MA:0002514") AnnotationAssertion( "NCIT:C52555") AnnotationAssertion(Annotation( "ncithesaurus:Esophagus_Secretion") "UMLS:C0227179") AnnotationAssertion(Annotation( "FMA:79662") "esophageal secretion") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "gullet secretion") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "oesophagus secretion") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "secretion of esophagus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "secretion of gullet") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "secretion of oesophagus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004794") AnnotationAssertion(rdfs:label "esophagus secretion") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pancreas secretion) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A secretion that is part of a pancreas [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( "MA:0002516") AnnotationAssertion( "NCIT:C13270") AnnotationAssertion(Annotation( "ncithesaurus:Pancreatic_Secretion") "UMLS:C0030296") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "pancreatic secretion") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "secretion of pancreas") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004795") AnnotationAssertion(rdfs:label "pancreas secretion") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (prostate gland secretion) AnnotationAssertion(Annotation( ) "A bodily secretion that is produced by the prostate gland.") AnnotationAssertion( "Prostatic secretions vary among species. They are generally composed of simple sugars and are often slightly alkaline.") AnnotationAssertion( "A secretion of the prostate this is slightly alkaline fluid, milky or white in appearance. Usually constitutes 20-30% of the volume of the semen along with spermatozoa and seminal vesicle fluid [Wikipedia:Prostate#Secretions]") AnnotationAssertion( "UBERON:0010142") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:36545") AnnotationAssertion( "FMA:66884") AnnotationAssertion( "MA:0002525") AnnotationAssertion( "NCIT:C52553") AnnotationAssertion(Annotation( "ncithesaurus:Prostate_Gland_Secretion") "UMLS:C1709733") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "prostate secretion") AnnotationAssertion(Annotation( "FMA:66884") "prostatic fluid") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "secretion of prostate") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "secretion of prostate gland") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0001232") "prostate fluid") AnnotationAssertion( "UBERON:0004796") AnnotationAssertion(rdfs:label "prostate gland secretion") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (blood vessel layer) AnnotationAssertion(Annotation( ) "Any of the tissue layers that comprise a blood vessel. Examples: tunica media, tunica adventitia.") AnnotationAssertion( "EMAPA:36296") AnnotationAssertion( "MA:0002854") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004797") AnnotationAssertion(rdfs:label "blood vessel layer") AnnotationAssertion( "Blood:vessels.svg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (respiratory system basal lamina) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A basal lamina that is part of a respiratory system [Automatically generated definition].") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37571") AnnotationAssertion( "MA:0001816") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "apparatus respiratorius basal lamina") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "apparatus respiratorius basal lamina of connective tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "basal lamina of apparatus respiratorius") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "basal lamina of connective tissue of apparatus respiratorius") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "basal lamina of connective tissue of respiratory system") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "basal lamina of respiratory system") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "respiratory system basal lamina of connective tissue") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004798") AnnotationAssertion(rdfs:label "respiratory system basal lamina") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (trachea basal lamina) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A basal lamina that is part of a respiratory airway [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37553") AnnotationAssertion( "MA:0001855") AnnotationAssertion( "NCIT:C49303") AnnotationAssertion(Annotation( "ncithesaurus:Trachea_Basal_Lamina") "UMLS:C1710454") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "basal lamina of connective tissue of respiratory airway") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004799") AnnotationAssertion(rdfs:label "trachea basal lamina") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (bronchus basal lamina) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A basal lamina that is part of a bronchus [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37810") AnnotationAssertion( "MA:0001833") AnnotationAssertion( "NCIT:C49207") AnnotationAssertion(Annotation( "ncithesaurus:Bronchus_Basal_Lamina") "UMLS:C1707050") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "basal lamina of bronchi") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "basal lamina of bronchial trunk") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "basal lamina of bronchus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "basal lamina of connective tissue of bronchi") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "basal lamina of connective tissue of bronchial trunk") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "basal lamina of connective tissue of bronchus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bronchi basal lamina") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bronchi basal lamina of connective tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bronchial trunk basal lamina") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bronchial trunk basal lamina of connective tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bronchus basal lamina of connective tissue") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004800") AnnotationAssertion(rdfs:label "bronchus basal lamina") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (cervix epithelium) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An epithelium that is part of a uterine cervix [Automatically generated definition].") AnnotationAssertion(Annotation( ) "The epithelium of the cervix is varied. The ectocervix (more distal, by the vagina) is composed of nonkeratinized stratified squamous epithelium. The endocervix (more proximal, within the uterus) is composed of simple columnar epithelium") AnnotationAssertion( ) AnnotationAssertion( "BTO:0000241") AnnotationAssertion( "CALOHA:TS-0137") AnnotationAssertion( "EFO:0001913") AnnotationAssertion( "EMAPA:29929") AnnotationAssertion( "MA:0001724") AnnotationAssertion( "NCIT:C49218") AnnotationAssertion(Annotation( "ncithesaurus:Cervix_Epithelium") "UMLS:C1711358") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "cervical canal epithelial tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "cervical canal epithelium") AnnotationAssertion(Annotation( "BTO:0000241") "cervical epithelium") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "cervix epithelial tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelium of cervix") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004801") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "cervix epithelium") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (respiratory tract epithelium) AnnotationAssertion(Annotation( "ISBN:0-683-40008-8"^^xsd:string) Annotation( "MGI:anna"^^xsd:string) Annotation( "MP:0010942") "The pseudostratified ciliated epithelium that lines much of the conducting portion of the airway, including part of the nasal cavity and larynx, the trachea, and bronchi.") AnnotationAssertion( ) AnnotationAssertion( "BTO:0000419") AnnotationAssertion( "CALOHA:TS-0023") AnnotationAssertion( "EMAPA:32827") AnnotationAssertion( "MA:0001480") AnnotationAssertion( "VHOG:0000981") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelial tissue of respiratory tract") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelium of respiratory tract") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "respiratory tract epithelial tissue") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0000419") "airway epithelium") AnnotationAssertion(Annotation( "BTO:0000419") "respiratory epithelium") AnnotationAssertion( "UBERON:0004802") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "respiratory tract epithelium") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (penis epithelium) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An epithelium that is part of a penis [Automatically generated definition].") AnnotationAssertion( "EHDAA2:0004039") AnnotationAssertion( "EMAPA:35674") AnnotationAssertion( "MA:0001742") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelial tissue of penis") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelium of penis") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "penis epithelial tissue") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004803") AnnotationAssertion(rdfs:label "penis epithelium") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (oviduct epithelium) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An epithelium that is part of a oviduct [Automatically generated definition].") AnnotationAssertion(Annotation( "FMA"^^xsd:string) "in FMA, epithelium of uterine tube is a subclass of ciliated columnar epithelium. MA introduces subtypes: ciliated columnar and cuboidal. We map the FMA type according to its relationships, not its label") AnnotationAssertion( "BTO:0002402") AnnotationAssertion( "CALOHA:TS-1316") AnnotationAssertion( "EMAPA:29043") AnnotationAssertion( "MA:0001718") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelial tissue of oviduct") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelium of fallopian tube") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelium of oviduct") AnnotationAssertion(Annotation( "FMA:62016") "epithelium of uterine tube") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "oviduct epithelial tissue") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0002402") "columnar epithelium of the fallopian tube") AnnotationAssertion(Annotation( "BTO:0002402") "columnar epithelium of the oviduct") AnnotationAssertion(Annotation( "BTO:0002402") "fallopian tube epithelium") AnnotationAssertion( "UBERON:0004804") AnnotationAssertion(rdfs:label "oviduct epithelium") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (seminal vesicle epithelium) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An epithelium that is part of a seminal vesicle [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( "CALOHA:TS-2069") AnnotationAssertion( "EMAPA:29771") AnnotationAssertion( "MA:0001745") AnnotationAssertion( "NCIT:C49295") AnnotationAssertion(Annotation( "ncithesaurus:Seminal_Vesicle_Epithelium") "UMLS:C1710049") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelial tissue of seminal gland") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelial tissue of seminal vesicle") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelium of seminal gland") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelium of seminal vesicle") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "seminal gland epithelial tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "seminal gland epithelium") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "seminal vesicle epithelial tissue") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004805") AnnotationAssertion(rdfs:label "seminal vesicle epithelium") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (vas deferens epithelium) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An epithelium that is part of a vas deferens [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:29274") AnnotationAssertion( "FMA:225317") AnnotationAssertion( "MA:0001749") AnnotationAssertion( "NCIT:C49315") AnnotationAssertion(Annotation( "ncithesaurus:Vas_Deferens_Epithelium") "UMLS:C1710617") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "deferent duct epithelial tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "deferent duct epithelium") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "ductus deferens epithelial tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "ductus deferens epithelium") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelial tissue of deferent duct") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelial tissue of ductus deferens") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelial tissue of sperm duct") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelial tissue of vas deferen") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelial tissue of vas deferens") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelium of deferent duct") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelium of ductus deferens") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelium of sperm duct") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelium of vas deferen") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelium of vas deferens") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "sperm duct epithelial tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "sperm duct epithelium") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "vas deferen epithelial tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "vas deferen epithelium") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "vas deferens epithelial tissue") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004806") AnnotationAssertion(rdfs:label "vas deferens epithelium") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (respiratory system epithelium) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An epithelium that is part of a respiratory system [Automatically generated definition].") AnnotationAssertion( "CALOHA:TS-0023") AnnotationAssertion( "EMAPA:32826") AnnotationAssertion( "MA:0001823") AnnotationAssertion( "VHOG:0000981") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "apparatus respiratorius epithelial tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "apparatus respiratorius epithelium") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelial tissue of apparatus respiratorius") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelial tissue of respiratory system") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelium of apparatus respiratorius") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelium of respiratory system") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "respiratory system epithelial tissue") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004807") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "respiratory system epithelium") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (gastrointestinal system epithelium) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An epithelium that is part of a digestive system [Automatically generated definition].") AnnotationAssertion( "EMAPA:32683") AnnotationAssertion( "MA:0001520") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "digestive system epithelial tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "digestive system epithelium") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelial tissue of digestive system") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelial tissue of gastrointestinal system") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelium of digestive system") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelium of gastrointestinal system") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "gastrointestinal system epithelial tissue") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004808") AnnotationAssertion(rdfs:label "gastrointestinal system epithelium") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (salivary gland epithelium) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An epithelium that is part of a salivary gland [Automatically generated definition].") AnnotationAssertion( "BTO:0004421") AnnotationAssertion( "CALOHA:TS-2067") AnnotationAssertion( "EMAPA:32816") AnnotationAssertion( "MA:0001587") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelial tissue of salivary gland") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelium of salivary gland") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "salivary gland epithelial tissue") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004809") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "salivary gland epithelium") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (nephron tubule epithelium) AnnotationAssertion(Annotation( "MGI:csmith"^^xsd:string) Annotation( "MP:0009640") "The cellular avascular layer of the renal tubule luminar surfaces.") AnnotationAssertion( "See https://github.com/obophenotype/uberon/issues/1305") AnnotationAssertion( ) AnnotationAssertion( "BTO:0005239") AnnotationAssertion( "EMAPA:36524") AnnotationAssertion( "MA:0001681") AnnotationAssertion( "NCIT:C49276") AnnotationAssertion(Annotation( "ncithesaurus:Renal_Tubule_Epithelium") "UMLS:C1709902") AnnotationAssertion(Annotation( "MA:0001681") "kidney tubule epithelium") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004810") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "nephron tubule epithelium") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (endometrium epithelium) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An epithelium that is part of an endometrium [Automatically generated definition].") AnnotationAssertion(Annotation( ) "In rodents and primates, the uterine epithelium (the endometrium) is eroded away so that maternal blood comes into direct contact with the trophoblast surface (called haemochorial)") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:35307") AnnotationAssertion( "MA:0002731") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "endometrium epithelial tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelial tissue of endometrium") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelium of endometrium") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelium of tunica mucosa of endometrium") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "uterine epithelium") AnnotationAssertion( "UBERON:0004811") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "endometrium epithelium") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (male prepuce epithelium) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An epithelium that is part of a prepuce of penis [Automatically generated definition].") AnnotationAssertion( "NCITA term may be sex-neutral") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelial tissue of prepuce") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelium of prepuce") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "prepuce epithelial tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "prepuce of penis epithelium") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:30655") AnnotationAssertion( "MA:0001753") AnnotationAssertion( "NCIT:C49270") AnnotationAssertion(Annotation( "ncithesaurus:Prepuce_Epithelium") "UMLS:C1709639") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelial tissue of foreskin") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelial tissue of penile prepuce") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelial tissue of prepuce of penis") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelium of foreskin") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelium of penile prepuce") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelium of prepuce of penis") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "foreskin epithelial tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "foreskin epithelium") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "penile prepuce epithelial tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "penile prepuce epithelium") AnnotationAssertion(Annotation( "MA:0001753") "prepuce epithelium") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "prepuce of penis epithelial tissue") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004812") AnnotationAssertion(rdfs:label "male prepuce epithelium") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (seminiferous tubule epithelium) AnnotationAssertion(Annotation( "MGI:csmith"^^xsd:string) Annotation( "MP:0011750") "The stratified epithelial lining of the seminiferous tubules, consisting of the developing spermatozoa and the supporting Sertoli cells, which are tall, columnar type cells that line the tubule.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0001811") AnnotationAssertion( "CALOHA:TS-0920") AnnotationAssertion( "EHDAA:8148") AnnotationAssertion( "EMAPA:35761") AnnotationAssertion( "FMA:19885") AnnotationAssertion( "GAID:401") AnnotationAssertion( "MA:0001748") AnnotationAssertion( "MESH:D012670") AnnotationAssertion( "NCIT:C49296") AnnotationAssertion( "RETIRED_EHDAA2:0002009") AnnotationAssertion(Annotation( "ncithesaurus:Seminiferous_Epithelium") "UMLS:C0036629") AnnotationAssertion( "VHOG:0000631") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelial tissue of seminiferous tubule") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelial tissue of seminiferous tubule of testis") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelium of seminiferous tubule") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelium of seminiferous tubule of testis") AnnotationAssertion(Annotation( ) "germinal epithelium (male)") AnnotationAssertion(Annotation( ) "male germinal epithelium") AnnotationAssertion(Annotation( "BTO:0001811") "seminiferous epithelium") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "seminiferous tubule epithelial tissue") AnnotationAssertion(Annotation( "VHOG:0000631") "testis germinal epithelium") AnnotationAssertion(Annotation( ) "wall of seminiferous tubule") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004813") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "seminiferous tubule epithelium") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (upper respiratory tract epithelium) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An epithelium that is part of a upper respiratory tract [Automatically generated definition].") AnnotationAssertion( "EMAPA:35894") AnnotationAssertion( "MA:0001912") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelial tissue of upper respiratory tract") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelium of upper respiratory tract") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "upper respiratory tract epithelial tissue") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004814") AnnotationAssertion(rdfs:label "upper respiratory tract epithelium") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lower respiratory tract epithelium) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An epithelium that is part of a lower respiratory tract [Automatically generated definition].") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37549") AnnotationAssertion( "MA:0001481") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelial tissue of lower respiratory tract") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelium of lower respiratory tract") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "lower respiratory tract epithelial tissue") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004815") AnnotationAssertion(rdfs:label "lower respiratory tract epithelium") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (larynx epithelium) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An epithelium that is part of a larynx [Automatically generated definition].") AnnotationAssertion( "composed of squamous epithelium in the upper larynx and ciliated columnar epithelium in the lower larynx [ISBN:0-397-51047-0]") AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0004065") AnnotationAssertion( "EMAPA:35472") AnnotationAssertion( "MA:0001765") AnnotationAssertion( "NCIT:C49247") AnnotationAssertion(Annotation( "ncithesaurus:Laryngeal_Epithelium") "UMLS:C0751258") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelial tissue of larynx") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelium of larynx") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "laryngeal epithelium") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "larynx epithelial tissue") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004816") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "larynx epithelium") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lacrimal gland epithelium) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An epithelium that is part of a lacrimal gland [Automatically generated definition].") AnnotationAssertion( "EMAPA:36515") AnnotationAssertion( "MA:0001297") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelial tissue of lacrimal gland") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelium of lacrimal gland") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "lacrimal gland epithelial tissue") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004817") AnnotationAssertion(rdfs:label "lacrimal gland epithelium") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (terminal bronchus epithelium) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An epithelium that is part of a terminal bronchus [Automatically generated definition].") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37764") AnnotationAssertion( "MA:0001851") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelial tissue of terminal bronchus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelium of terminal bronchus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "terminal bronchus epithelial tissue") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004818") AnnotationAssertion(rdfs:label "terminal bronchus epithelium") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (kidney epithelium) AnnotationAssertion(Annotation( "MGI:csmith"^^xsd:string) Annotation( "MP:0004967") "The cellular avascular layer of the kidney luminar surfaces.") AnnotationAssertion( "BTO:0000059") AnnotationAssertion( "CALOHA:TS-0505") AnnotationAssertion( "EMAPA:35457") AnnotationAssertion( "MA:0002846") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelial tissue of kidney") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelium of kidney") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "kidney epithelial tissue") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "EMAPA:35457") "renal epithelium") AnnotationAssertion( "UBERON:0004819") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "kidney epithelium") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (bile duct epithelium) AnnotationAssertion(Annotation( ) "Any epithelium that lines one of the bile ducts.") AnnotationAssertion(Annotation( "BTO:0000417") "The irregularly shaped proliferating bile ducts are lined by normal cuboidal epithelium.") AnnotationAssertion( ) AnnotationAssertion( "BTO:0000417") AnnotationAssertion( "MA:0001629") AnnotationAssertion( "NCIT:C43616") AnnotationAssertion(Annotation( "ncithesaurus:Bile_Duct_Epithelium") "UMLS:C1711208") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "biliary duct epithelium") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelium of bile duct") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelium of biliary duct") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004820") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "bile duct epithelium") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pulmonary alveolus epithelium) AnnotationAssertion(Annotation( "BTO:0003511") Annotation( "MP:0010898") "The epithelial layer of the alveoli[MP]. The layer of cells covering the lining of the tiny air sacs at the end of the bronchioles[BTO].") AnnotationAssertion( "BTO:0003511") AnnotationAssertion( "EMAPA:35121") AnnotationAssertion( "FMA:63915") AnnotationAssertion( "MA:0001771") AnnotationAssertion( "NCIT:C12867") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "alveolus epithelial tissue") AnnotationAssertion(Annotation( "MA:0001771") "alveolus epithelium") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelial tissue of alveolus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelium of alveolus") AnnotationAssertion(Annotation( "FMA:63915") "epithelium of pulmonary alveolus") AnnotationAssertion(Annotation( "FMA:63915") "pulmonary alveolar epithelium") AnnotationAssertion(Annotation( "MP:0010898") "pulmonary alveolus epithelium") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "EMAPA:35121") "alveolar epithelium") AnnotationAssertion( "UBERON:0004821") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "pulmonary alveolus epithelium") SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (extrahepatic bile duct epithelium) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An epithelium that is part of a extrahepatic bile duct [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0000742") AnnotationAssertion( "EHDAA:3051") AnnotationAssertion( "MA:0002661") AnnotationAssertion( "NCIT:C43618") AnnotationAssertion(Annotation( "ncithesaurus:Extrahepatic_Bile_Duct_Epithelium") "UMLS:C1711347") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelial tissue of extrahepatic bile duct") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelium of extrahepatic bile duct") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "extrahepatic bile duct epithelial tissue") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004822") AnnotationAssertion(rdfs:label "extrahepatic bile duct epithelium") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (intrahepatic bile duct epithelium) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An epithelium that is part of a intrahepatic bile duct [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0000743") AnnotationAssertion( "EHDAA:3053") AnnotationAssertion( "MA:0002662") AnnotationAssertion( "NCIT:C43617") AnnotationAssertion(Annotation( "ncithesaurus:Intrahepatic_Bile_Duct_Epithelium") "UMLS:C1708552") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelial tissue of intrahepatic bile duct") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelium of intrahepatic bile duct") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "intrahepatic bile duct epithelial tissue") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004823") AnnotationAssertion(rdfs:label "intrahepatic bile duct epithelium") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (dental lamina) AnnotationAssertion(Annotation( ) "A band of ectodermal cells growing from the epithelium of the embryonic jaws into the underlying mesenchyme and giving rise to the primordia of the enamel organs of the teeth.") AnnotationAssertion(Annotation( ) "In the epidermis of embryonic birds, there remains a transient thickening that is comparable to the early formation of the dental lamina in the mouse") AnnotationAssertion(Annotation( "MA"^^xsd:string) "check MA placement, this structure is the developing structure") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0005563") AnnotationAssertion( "EMAPA:32902") AnnotationAssertion( "FMA:306004") AnnotationAssertion( "MA:0001597") AnnotationAssertion( "embryonic dental lamina") AnnotationAssertion( "uberon") AnnotationAssertion( "fetal dental lamina") AnnotationAssertion(Annotation( ) Annotation( ) "lamina dentalis") AnnotationAssertion( "UBERON:0004825") AnnotationAssertion(rdfs:label "dental lamina") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/7/7d/Dentallamina11-17-05.jpg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (thyroid gland medulla) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A medulla that is part of a thyroid [Automatically generated definition].") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37768") AnnotationAssertion( "MA:0000132") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "medulla of thyroid") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "medulla of thyroid follicle") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "medulla of thyroid gland") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "medulla of thyroid gland follicle") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "thyroid follicle medulla") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "thyroid gland follicle medulla") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "thyroid medulla") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004827") AnnotationAssertion(rdfs:label "thyroid gland medulla") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (urethra skeletal muscle tissue) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A portion of skeletal muscle tissue that is part of a urethra [Automatically generated definition].") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37788") AnnotationAssertion( "MA:0001690") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "skeletal muscle of urethra") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "skeletal muscle tissue of urethra") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "urethra skeletal muscle tissue") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "MA:0001690") "urethra skeletal muscle") AnnotationAssertion(Annotation( "MA:0001690") "urethral skeletal muscle") AnnotationAssertion( "UBERON:0004829") AnnotationAssertion(rdfs:label "urethra skeletal muscle tissue") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (respiratory system skeletal muscle) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A portion of skeletal muscle tissue that is part of a respiratory system [Automatically generated definition].") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37583") AnnotationAssertion( "MA:0001829") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "respiratory system skeletal muscle tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "skeletal muscle of apparatus respiratorius") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "skeletal muscle of respiratory system") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "skeletal muscle tissue of apparatus respiratorius") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "skeletal muscle tissue of respiratory system") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004830") AnnotationAssertion(rdfs:label "respiratory system skeletal muscle") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (esophagus skeletal muscle) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A portion of skeletal muscle tissue that is part of a esophagus [Automatically generated definition].") AnnotationAssertion( "EMAPA:36523") AnnotationAssertion( "MA:0001572") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "esophagus skeletal muscle tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "skeletal muscle of esophagus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004831") AnnotationAssertion(rdfs:comment "Most muscle tissue lining the digestive tract is smooth, but part of the externa of the esophagus is skeletal") AnnotationAssertion(rdfs:label "esophagus skeletal muscle") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (anal region skeletal muscle) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A portion of skeletal muscle tissue that is part of an anal region [Automatically generated definition].") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37393") AnnotationAssertion( "MA:0001530") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "anal part of perineum skeletal muscle") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "anal part of perineum skeletal muscle tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "anal region skeletal muscle tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "anal triangle skeletal muscle") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "anal triangle skeletal muscle tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "skeletal muscle of anal part of perineum") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "skeletal muscle of anal region") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "skeletal muscle of anal triangle") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "skeletal muscle tissue of anal part of perineum") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "skeletal muscle tissue of anal region") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "skeletal muscle tissue of anal triangle") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004832") AnnotationAssertion(rdfs:label "anal region skeletal muscle") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lip skeletal muscle) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A portion of skeletal muscle tissue that is part of a lip [Automatically generated definition].") AnnotationAssertion( "this class is derived from MA. Consider re-modeling this as being a muscle that acts on the lips. See: Wikipedia:Lip#Muscles_acting_on_the_lips") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37642") AnnotationAssertion( "MA:0001578") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "lip skeletal muscle tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "skeletal muscle of lip") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "skeletal muscle tissue of lip") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004833") AnnotationAssertion(rdfs:label "lip skeletal muscle") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (hepatic duct smooth muscle) AnnotationAssertion(Annotation( ) "Smooth muscle tissue in all or part of a hepatic duct.") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37598") AnnotationAssertion( "MA:0001640") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004834") AnnotationAssertion(rdfs:label "hepatic duct smooth muscle") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (epididymis smooth muscle) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A portion of smooth muscle tissue that is part of a epididymis [Automatically generated definition].") AnnotationAssertion( "EMAPA:30747") AnnotationAssertion( "MA:0001736") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epididymis involuntary muscle") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epididymis non-striated muscle") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epididymis smooth muscle tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "involuntary muscle of epididymis") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "non-striated muscle of epididymis") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "smooth muscle of epididymis") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "smooth muscle tissue of epididymis") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004835") AnnotationAssertion(rdfs:label "epididymis smooth muscle") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (respiratory system arterial endothelium) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An endothelium of artery that is part of a respiratory system [Automatically generated definition].") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37566") AnnotationAssertion( "MA:0001801") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "apparatus respiratorius arterial endothelium") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "apparatus respiratorius artery endothelium") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "apparatus respiratorius endothelium of artery") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "arterial endothelium of apparatus respiratorius") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "arterial endothelium of respiratory system") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "artery endothelium of apparatus respiratorius") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "artery endothelium of respiratory system") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "endothelium of artery of apparatus respiratorius") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "endothelium of artery of respiratory system") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "respiratory system artery endothelium") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "respiratory system endothelium of artery") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004848") AnnotationAssertion(rdfs:label "respiratory system arterial endothelium") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (respiratory system venous endothelium) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An endothelium of vein that is part of a respiratory system [Automatically generated definition].") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37585") AnnotationAssertion( "MA:0001811") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "apparatus respiratorius endothelium of vein") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "apparatus respiratorius vein endothelium") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "apparatus respiratorius venous endothelium") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "endothelium of vein of apparatus respiratorius") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "endothelium of vein of respiratory system") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "respiratory system endothelium of vein") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "respiratory system vein endothelium") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "vein endothelium of apparatus respiratorius") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "vein endothelium of respiratory system") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "venous endothelium of apparatus respiratorius") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "venous endothelium of respiratory system") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004849") AnnotationAssertion(rdfs:label "respiratory system venous endothelium") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lymph node endothelium) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An endothelium that is part of a lymph node [Automatically generated definition].") AnnotationAssertion( "EMAPA:35526") AnnotationAssertion( "MA:0000741") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "endothelium of lymph node") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004850") AnnotationAssertion(rdfs:label "lymph node endothelium") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (aorta endothelium) AnnotationAssertion(Annotation( "MGI:csmith"^^xsd:string) Annotation( "MP:0009864") "The thin layer of flat cells that line the aorta and form a barrier between circulating blood in the lumen and the rest of the vessel wall.") AnnotationAssertion( ) AnnotationAssertion( "BTO:0000394") AnnotationAssertion( "CALOHA:TS-0047") AnnotationAssertion( "EFO:0002597") AnnotationAssertion( "EMAPA:35134") AnnotationAssertion( "MA:0000701") AnnotationAssertion( "NCIT:C49190") AnnotationAssertion(Annotation( "ncithesaurus:Aorta_Endothelium") "UMLS:C1706824") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "adult aorta endothelium") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "endothelium of adult aorta") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "endothelium of aorta") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "endothelium of trunk of aortic tree") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "endothelium of trunk of systemic arterial tree") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "trunk of aortic tree endothelium") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "trunk of systemic arterial tree endothelium") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0000394") "aortic endothelium") AnnotationAssertion( "UBERON:0004851") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "aorta endothelium") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (cardiovascular system endothelium) AnnotationAssertion(Annotation( ) "An endothelium that is part of the cardiovascular system.") AnnotationAssertion( "consider merging with 'endothelium'") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001217") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0030259821 Ruppert EE, Fox RS, Barnes RD, Invertebrate zoology: a functional evolutionary approach (2003) p.207") "Vertebrates and a very few invertebrates such as squids have evolved a secondary epithelium, the endothelium, that lines their blood vessels.[well established][VHOG]") AnnotationAssertion( ) AnnotationAssertion( "BTO:0001853") AnnotationAssertion( "EMAPA:35201") AnnotationAssertion( "GAID:519") AnnotationAssertion( "MA:0000717") AnnotationAssertion( "MESH:D004730") AnnotationAssertion( "NCIT:C13053") AnnotationAssertion( "TAO:0002171") AnnotationAssertion(Annotation( "ncithesaurus:Vascular_Endothelium") "UMLS:C0014261") AnnotationAssertion( "VHOG:0001217") AnnotationAssertion( "XAO:0000356") AnnotationAssertion( "ZFA:0001639") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "ZFA:0001639") Annotation( ) "endothelia") AnnotationAssertion(Annotation( "XAO:0000356") Annotation( ) "vascular endothelia") AnnotationAssertion( "UBERON:0004852") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "cardiovascular system endothelium") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (gastrointestinal system mesentery) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A mesentery that is part of a digestive system [Automatically generated definition].") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37068") AnnotationAssertion( "MA:0001900") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "digestive system mesentery") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mesentery of digestive system") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mesentery of gastrointestinal system") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004854") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "gastrointestinal system mesentery") SubClassOf( ) SubClassOf( ) # Class: (skeletal muscle connective tissue) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A connective tissue that surrounds a skeletal muscle tissue.") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37743") AnnotationAssertion( "MA:0002868") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "connective tissue of skeletal muscle") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "connective tissue of skeletal muscle tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "portion of connective tissue of skeletal muscle") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "portion of connective tissue of skeletal muscle tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "skeletal muscle portion of connective tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "skeletal muscle textus connectivus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "skeletal muscle tissue connective tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "skeletal muscle tissue portion of connective tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "skeletal muscle tissue textus connectivus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "textus connectivus of skeletal muscle") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "textus connectivus of skeletal muscle tissue") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "MA:0002868") "skeletal muscle interstitial tissue") AnnotationAssertion(Annotation( "MA:0002868") "skeletal muscle interstitum") AnnotationAssertion( "UBERON:0004857") AnnotationAssertion(rdfs:label "skeletal muscle connective tissue") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (cellular cartilage) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37473") AnnotationAssertion( "MA:0000105") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004858") AnnotationAssertion(rdfs:label "cellular cartilage") SubClassOf( ) # Class: (eye gland) AnnotationAssertion(Annotation( ) "A gland that is part of a eye. The eye is a compound unit which depending on the species may consist of an eyeballs plus associated ducts and integumentary structures. Eye glands therefore include the various types of lacrimal gland, the various types of apocrine and sebaceous glands associated with the eyelid.") AnnotationAssertion( "EMAPA:35334") AnnotationAssertion( "MA:0000267") AnnotationAssertion(Annotation( ) "eye-associated gland") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "gland of eye") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004859") AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "Examples: harderian gland, accessory lacrimal gland, gland of Moll, gland of Zeis, nictitating membrane glands") AnnotationAssertion(rdfs:label "eye gland") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete brain ventricular zone) AnnotationAssertion( "UBERON:0003053") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004860") AnnotationAssertion(rdfs:label "obsolete brain ventricular zone") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (right lung alveolus) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An alveolus that is part of a right lung [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:35997") AnnotationAssertion( "MA:0001786") AnnotationAssertion( "NCIT:C49278") AnnotationAssertion(Annotation( "ncithesaurus:Right_Lung_Alveolus") "UMLS:C1709959") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "alveolus of right lung") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004861") AnnotationAssertion(rdfs:label "right lung alveolus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (left lung alveolus) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An alveolus that is part of a left lung [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:19182") AnnotationAssertion( "MA:0001777") AnnotationAssertion( "NCIT:C49251") AnnotationAssertion(Annotation( "ncithesaurus:Left_Lung_Alveolus") "UMLS:C1708673") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "alveolus of left lung") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "alveolus of lobe of left lung") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004862") AnnotationAssertion(rdfs:label "left lung alveolus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (thoracic sympathetic nerve trunk) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A sympathetic nerve trunk that is part of a thorax [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37657") AnnotationAssertion( "FMA:6262") AnnotationAssertion( "MA:0001165") AnnotationAssertion( "NCIT:C52827") AnnotationAssertion(Annotation( "ncithesaurus:Thoracic_Sympathetic_Nerve_Trunk") "UMLS:C1710393") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "nerve trunk of sympathetic nervous system of thorax") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "nerve trunk of sympathetic part of autonomic division of nervous system of thorax") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "sympathetic nerve trunk of thorax") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "sympathetic nervous system nerve trunk of thorax") AnnotationAssertion(Annotation( "FMA:6262") "thoracic part of sympathetic trunk") AnnotationAssertion(Annotation( "FMA:6262") "thoracic sympathetic chain") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "thorax nerve trunk of sympathetic nervous system") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "thorax nerve trunk of sympathetic part of autonomic division of nervous system") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "thorax sympathetic nerve trunk") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "thorax sympathetic nervous system nerve trunk") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:6262") "thoracic sympathetic trunk") AnnotationAssertion( "UBERON:0004863") AnnotationAssertion(rdfs:label "thoracic sympathetic nerve trunk") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (vasculature of retina) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A vasculature that is part of a retina [Automatically generated definition].") AnnotationAssertion(Annotation( ) Annotation( ) Annotation( "michaelerice") ) AnnotationAssertion( "FMA:76552") AnnotationAssertion( "MESH:D012171") AnnotationAssertion( "XAO:0004153") AnnotationAssertion(Annotation( "GO:0061298") "retina vasculature") AnnotationAssertion(Annotation( "GO:0061298") "retina vasculature of camera-type eye") AnnotationAssertion(Annotation( "FMA:76552") "retinal blood vessels") AnnotationAssertion(Annotation( "FMA:76552") "retinal blood vessels set") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "retinal vasculature") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "set of blood vessels of retina") AnnotationAssertion(Annotation( "FMA:76552") "set of retinal blood vessels") AnnotationAssertion(Annotation( "FMA:76552") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "vasa sanguinea retinae") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004864") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "vasculature of retina") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (actinopterygian parietal bone) AnnotationAssertion(Annotation( "TAO:0000486") Annotation( "TAO:GA_TG"^^xsd:string) "Dermal bone that covers the otic region and may articulate with its antimere medially, with the frontal bone anteriorly, the pterotic laterally, the supraoccipital medio-posteriorly, and the epiotic and extrascapula latero-posteriorly. The parietal is a paired bone.[TAO].") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0000486") Annotation( "TAO"^^xsd:string) Annotation( "TAO:GA_TG") "Dermal bone that covers the otic region and may articulate with its antimere medially, with the frontal bone anteriorly, the pterotic laterally, the supraoccipital medio-posteriorly, and the epiotic and extrascapula latero-posteriorly. The parietal is a paired bone.[TAO]") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0000486") Annotation( "TAO"^^xsd:string) "relationship loss: overlaps frontal-parietal joint (TAO:0005255)[TAO]") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0000486") Annotation( "TAO"^^xsd:string) "relationship loss: overlaps inter-parietal joint (TAO:0005245)[TAO]") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0000486") Annotation( "TAO"^^xsd:string) "relationship loss: overlaps posttemporal-parietal joint (TAO:0002059)[TAO]") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0000486") Annotation( "TAO"^^xsd:string) "relationship loss: overlaps supraoccipital-parietal joint (TAO:0005264)[TAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001327") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-3899370805 Arratia G, Schultze HP, Wilson MVH, Mesozoic Fishes 4 - Homology and Phylogeny (2008) p.23-48") "The homologization of cranial bones of actinopterygians with those of sarcopterygians based on the bone names established in human anatomy is favored in order to permit the building of phylogenetic relationship schemes beyond the taxonomic boundaries of osteichthyans (including tetrapods). (...) In actinopterygians, the terms parietal and postparietal bones have to replace the commonly used terms 'frontal' and 'parietal' bones for the two paired bones on the skull roof.[well established][VHOG]") AnnotationAssertion(Annotation( "2012-09-06"^^xsd:string) Annotation( "TAO:0000486") Annotation( "TAO"^^xsd:string) Annotation( "Curator"^^xsd:string) "The parietal is a flat, commonly squarish or rectangular bone.[TAO]") AnnotationAssertion( "TAO:0000486") AnnotationAssertion( "VHOG:0001327") AnnotationAssertion( "ZFA:0000486") AnnotationAssertion( "actinopterygian parietal") AnnotationAssertion(Annotation( "FMA:52734") "frontal bone") AnnotationAssertion(Annotation( "TAO:0000486") Annotation( ) "parietal bone") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "TAO:0000486") Annotation( ) "parietals") AnnotationAssertion(Annotation( "ZFA:0000486") "post parietal") AnnotationAssertion( "UBERON:0004865") AnnotationAssertion(rdfs:label "actinopterygian parietal bone") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "ZFA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "ZFA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (actinopterygian frontal bone) AnnotationAssertion(Annotation( "TAO:0000514") "Dermal bone that bears part of the supraorbital canal and usually covers a large area of the neurocranium occupying part of the ethmoidal, orbitosphenoid, and otic regions. Commonly, the frontal bone articulates with its antimere medially, with lateral ethmoid, orbitosphenoid and pterosphenoid ventrolaterally, with supraorbital bone(s), autosphenotic and pterotic laterally, and with parietal posteriorly.[TAO].") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0000514") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "Dermal bone that bears part of the supraorbital canal and usually covers a large area of the neurocranium occupying part of the ethmoidal, orbitosphenoid, and otic regions. Commonly, the frontal bone articulates with its antimere medially, with lateral ethmoid, orbitosphenoid and pterosphenoid ventrolaterally, with supraorbital bone(s), autosphenotic and pterotic laterally, and with parietal posteriorly.[TAO]") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0000514") Annotation( "TAO"^^xsd:string) "relationship loss: overlaps frontal-parietal joint (TAO:0005255)[TAO]") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0000514") Annotation( "TAO"^^xsd:string) "relationship loss: overlaps frontal-pterotic joint (TAO:0001711)[TAO]") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0000514") Annotation( "TAO"^^xsd:string) "relationship loss: overlaps inter-frontal joint (TAO:0001922)[TAO]") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0000514") Annotation( "TAO"^^xsd:string) "relationship loss: overlaps lateral ethmoid-frontal joint (TAO:0002032)[TAO]") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0000514") Annotation( "TAO"^^xsd:string) "relationship loss: overlaps mesethmoid-frontal joint (TAO:0001678)[TAO]") AnnotationAssertion(Annotation( "2012-09-06"^^xsd:string) Annotation( "TAO:0000514") Annotation( "TAO"^^xsd:string) Annotation( "Curator"^^xsd:string) "The frontal bone may be paired or unpaired. The frontal bone of actinopterygians is homologous to the parietal of tetrapods. Actinopterygians do not have a frontal bone. For details, see Schultze (2008) and Wiley (2008).[TAO]") AnnotationAssertion( "The frontal bone in teleost fish is the homolog of the parietal bone in tetrapods") AnnotationAssertion( "TAO:0000514") AnnotationAssertion( "VHOG:0001324") AnnotationAssertion( "ZFA:0000514") AnnotationAssertion(Annotation( "TAO:0000514") "actinopterygian frontal") AnnotationAssertion(Annotation( "TAO:0000514") "actinopterygian frontal bone") AnnotationAssertion(Annotation( "TAO:0000514") "frontal bone") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "TAO:0000514") Annotation( ) "frontals") AnnotationAssertion( "UBERON:0004866") AnnotationAssertion(rdfs:label "actinopterygian frontal bone") SubClassOf(Annotation( "ZFA"^^xsd:string) ) SubClassOf( ) SubClassOf(Annotation( "ZFA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "ZFA-modified"^^xsd:string) ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) # Class: (orbital cavity) AnnotationAssertion(Annotation( ) "Anatomical cavity bounded by the orbital region of the cranium and forming the location of some or all of the eye.") AnnotationAssertion(Annotation( "AAO"^^xsd:string) Annotation( "https://github.com/obophenotype/uberon/issues/462") "note that the AAO and ZFA class is a cavity") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0000343") AnnotationAssertion( "FMA:84961") AnnotationAssertion( "ZFA:0005558") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "AAO:0000343") "orbit") AnnotationAssertion( "UBERON:0004867") AnnotationAssertion(rdfs:label "orbital cavity") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (superficial cervical lymph node) AnnotationAssertion(Annotation( ) Annotation( ) Annotation( "CL:tm") Annotation( "ref:Stedmans") "A group of nodes lying along the external jugular vein; they drain the skin and superficial structures over the region of the sternocleidomastoid muscle and anterior cervical regions. Efferent vessels drain to the deep cervical lymph nodes. Lymph nodes can be further subdivided into anterior and lateral groupings.") AnnotationAssertion(Annotation( ) ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37725") AnnotationAssertion( "MA:0002886") AnnotationAssertion( "NCIT:C33659") AnnotationAssertion(Annotation( "ncithesaurus:Superficial_Cervical_Lymph_Node") "UMLS:C0458297") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "nodi lymphoidei cervicales") AnnotationAssertion(Annotation( "CL:tm") "prescapular lymph node") AnnotationAssertion( "UBERON:0004870") AnnotationAssertion(rdfs:label "superficial cervical lymph node") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/4/4e/Illu_quiz_hn_03.jpg"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "CL:tm") ) SubClassOf( ) # Class: (somatic layer of lateral plate mesoderm) AnnotationAssertion(Annotation( ) "Layer of lateral plate mesoderm that forms the future body wall - underlies the ectoderm[WP].") AnnotationAssertion( "check BILA") AnnotationAssertion( ) AnnotationAssertion( "AAO:0011100") AnnotationAssertion( "BILA:0000047") AnnotationAssertion( "FMA:295570") AnnotationAssertion( "XAO:0000271") AnnotationAssertion( "outer layer of lateral plate mesoderm") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "ISBN:9780878932504") "parietal mesoderm") AnnotationAssertion(Annotation( "BILA:0000047") "somatic mesoderm") AnnotationAssertion( "UBERON:0004871") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "somatic layer of lateral plate mesoderm") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (splanchnic layer of lateral plate mesoderm) AnnotationAssertion(Annotation( ) "Layer of lateral plate mesoderm that forms the circulatory system and future gut wall - overlies endoderm[WP].") AnnotationAssertion(Annotation( "BILA") "We group the BILA class here. Considering adding more general class for metazoa grouping cardiogenic successors") AnnotationAssertion(Annotation( ) Annotation( ) Annotation( "BILA:0000044") "visceral mesoderm") AnnotationAssertion( ) AnnotationAssertion( "AAO:0011102") AnnotationAssertion( "BILA:0000044") AnnotationAssertion( "FMA:295568") AnnotationAssertion( "XAO:0000276") AnnotationAssertion( "inner layer of lateral plate mesoderm") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "ISBN:9780878932504") "splanchnic mesoderm") AnnotationAssertion( "UBERON:0004872") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "splanchnic layer of lateral plate mesoderm") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (splanchnopleure) AnnotationAssertion(Annotation( ) "A structure created during embryogenesis when the lateral mesoderm splits into two layers - the inner (or splanchnic) layer adheres to the endoderm, and with it forms the splanchnopleure[WP].") AnnotationAssertion( "TODO - check relationship to LPM") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0001903") AnnotationAssertion( "EHDAA:383") AnnotationAssertion( "EMAPA:16181") AnnotationAssertion( "FMA:295564") AnnotationAssertion( "NCIT:C34303") AnnotationAssertion(Annotation( "ncithesaurus:Splanchnopleure") "UMLS:C1519472") AnnotationAssertion( "VHOG:0000558") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "ventral splanchnic mesoderm") AnnotationAssertion( "UBERON:0004873") AnnotationAssertion(rdfs:label "splanchnopleure") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/2/28/Gray16.png"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) # Class: (somatopleure) AnnotationAssertion(Annotation( ) "A structure created during embryogenesis when the lateral mesoderm splits into two layers - the outer (or somatic) layer becomes applied to the inner surface of the ectoderm, and with it forms the somatopleure.[WP].") AnnotationAssertion( "Gives rise to the paired appendages in jawed vertebrates. a persistent somatopleure through the redistribution and expansion of the lateral plate mesoderm is a synapomorphy for gnathostomes and a critical step in generating a novel developmental module with dramatic evolutionary potentia (Tulenko et al. 2012) http://burkelab.research.wesleyan.edu/current-projects/lamprey/") AnnotationAssertion( "sources differ as to whether this is part-of or develops-from the LPM") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0001847") AnnotationAssertion( "EHDAA:381") AnnotationAssertion( "EMAPA:16180") AnnotationAssertion( "FMA:295566") AnnotationAssertion( "NCIT:C34301") AnnotationAssertion(Annotation( "ncithesaurus:Somatopleure") "UMLS:C1519423") AnnotationAssertion( "VHOG:0000557") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004874") AnnotationAssertion(rdfs:label "somatopleure") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/2/28/Gray16.png"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) # Class: (nephrogenic cord) AnnotationAssertion(Annotation( ) "A portion of the urogenital ridge which is the source of much of the urinary system[WP].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:72168") AnnotationAssertion( "NCIT:C34219") AnnotationAssertion(Annotation( "ncithesaurus:Nephrogenic_Cord") "UMLS:C1283944") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "chorda nephrogenica") AnnotationAssertion( "UBERON:0004875") AnnotationAssertion(rdfs:comment "part_of or develops_from urogenital ridge?") AnnotationAssertion(rdfs:label "nephrogenic cord") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (urogenital fold) AnnotationAssertion(Annotation( ) Annotation( "MP:0011835") Annotation( "MP:anna"^^xsd:string) "One of of the pair of folds derived from the cloacal folds which give rise to a portion of the external genitalia; in male embryos they close over the urethral plate and fuse to form the spongy (penile) urethra and ventral aspect of the penis, not including the glans; failure of fusion of the urethral folds leads to hypospadias; in female embryos they fuse only anterior to the anus and form the labia minora[MP].") AnnotationAssertion( "Less commonly, urogenital fold refers to the fold in the mesonephros which is the precursor of e.g. the suspensory ligament of the ovary. This is the case in older versions of Gray's anatomy[WP]") AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0004022") AnnotationAssertion( "EMAPA:30888") AnnotationAssertion( "FMA:321919") AnnotationAssertion(Annotation( "EMAPA:30888") "urethral fold") AnnotationAssertion(Annotation( "EHDAA2:0004022") Annotation( "MP:0011835") "urogenital fold") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "MP:0011835") Annotation( ) "urogenital ridge") AnnotationAssertion( "UBERON:0004876") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "urogenital fold") SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "Wikipedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (visceral endoderm) AnnotationAssertion(Annotation( ) Annotation( "MP:0011186") "Visceral endoderm, a population of extraembyonic endoderm, is an extraembryonic tissue that functions in a regulatory capacity but does not contribute directly to the formation of any adult organs[PMID:15905405]. primitive endoderm-derived tissue which remains in contact with and surrounds the extra-embryonic ectoderm and the epiblast and provides signals for the differentiation and patterning of the epiblast; a small number of visceral endoderm cells also contribute to the endoderm of the embryonic gut[MP].") AnnotationAssertion( "Gilbert uses visceral endoderm as a synonym for primitive endoderm/hypoblast") AnnotationAssertion( "BTO:0003487") AnnotationAssertion( "EMAPA:16058") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004877") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "visceral endoderm") SubClassOf( ) SubClassOf(Annotation( "BTO"^^xsd:string) ) # Class: (distal visceral endoderm) AnnotationAssertion(Annotation( "MP:0010126") "Precursors of the anterior visceral endoderm that arises at the distal tip of the embryo[MP].") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004878") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "distal visceral endoderm") SubClassOf( ) # Class: (marginal zone of embryo) AnnotationAssertion(Annotation( "XAO:0000068") "Belt-like region of presumptive mesoderm at the equator of the late blastula.") AnnotationAssertion(Annotation( "ZFA:0000038") "margin") AnnotationAssertion(Annotation( "XAO:0000068") "marginal zone") AnnotationAssertion( "AAO:0010448") AnnotationAssertion( "TAO:0000038") AnnotationAssertion( "XAO:0000068") AnnotationAssertion( "ZFA:0000038") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "TAO:0000038") Annotation( ) "margins") AnnotationAssertion( "UBERON:0004879") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "marginal zone of embryo") AnnotationAssertion(rdfs:seeAlso "https://github.com/obophenotype/uberon/issues/153"^^xsd:anyURI) SubClassOf( ) # Class: (chordamesoderm) AnnotationAssertion(Annotation( ) "The central region of trunk mesoderm. This tissue forms the notochord.") AnnotationAssertion(Annotation( "ZFIN:ZDB-PUB-961014-576") "Notochord rudiment[ZFIN:ZDB-PUB-961014-576].") AnnotationAssertion( "WP treats this as synonym of axial mesoderm. Induces neural tube. Gilbert: contains an anterior head process and the notochord.") AnnotationAssertion( "AAO:0000478") AnnotationAssertion( "EFO:0003426") AnnotationAssertion( "TAO:0000091") AnnotationAssertion( "ZFA:0000091") AnnotationAssertion(Annotation( "ZFA:0000091") "axial chorda mesoderm") AnnotationAssertion( "chorda mesoderm") AnnotationAssertion(Annotation( ) "dorsal mesoderm") AnnotationAssertion(Annotation( "ZFA:0000091") "presumptive notochord") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004880") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "chordamesoderm") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (eponychium) AnnotationAssertion(Annotation( ) "Thickened layer of skin surrounding fingernails and toenails. Beneath the cuticle is a thin layer of a membrane known as the pterygium. The function is to protect the area between the nail and epidermis from exposure to harmful bacteria. The vascularization pattern is similar to that of perionychium. The eponychium is the end of the proximal fold that folds back upon itself to shed an epidermal layer of skin onto the newly formed nail plate. This layer of non-living, almost invisible skin is the cuticle that 'rides out' on the surface of the nail plate. Together, the eponychium and the cuticle form a protective seal. The cuticle on the nail plate is dead cells and is often removed during manicure, but the eponychium is living cells and should not be touched.[6] The perionyx is the projecting edge of the eponychium covering the proximal strip of the lunula[WP].") AnnotationAssertion( "In hoofed animals, the eponychium is the deciduous hoof capsule in fetuses and newborn foals, and is a part of the permanent hoof in older animals") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37507") AnnotationAssertion( "FMA:77859") AnnotationAssertion( "MA:0002704") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "MA:0002704") "cuticle") AnnotationAssertion( "UBERON:0004882") AnnotationAssertion(rdfs:label "eponychium") AnnotationAssertion( "Fingernail:label.jpg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lung mesenchyme) AnnotationAssertion(Annotation( "GO:0060484") "The mass of tissue made up of mesenchymal cells in the lung.") AnnotationAssertion( "EMAPA:32866") AnnotationAssertion(Annotation( "GO:0060484") "lung-associated mesenchyme") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mesenchyme of lung") AnnotationAssertion(Annotation( "GO:0060484") "pulmonary mesenchyme") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004883") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "lung mesenchyme") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lobar bronchus mesenchyme) AnnotationAssertion(Annotation( "GO:0060483") "The mass of tissue composed of mesenchymal cells in the lobar bronchus..") AnnotationAssertion( "EMAPA:32698") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mesenchyme of lobar bronchus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004884") AnnotationAssertion(rdfs:label "lobar bronchus mesenchyme") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (hilum) AnnotationAssertion(Annotation( ) "An anatomical cavity, depression or pit where structures are attached.") AnnotationAssertion(Annotation( "NCIT") "Galen and NCITA refer to the generic structure") AnnotationAssertion( "UBERON:0004460") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:57836") AnnotationAssertion( "NCIT:C73467") AnnotationAssertion(Annotation( "ncithesaurus:Hilum") "UMLS:C0929176") AnnotationAssertion( "galen:Hilum") AnnotationAssertion(Annotation( ) "hilus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004885") AnnotationAssertion(rdfs:label "hilum") SubClassOf( ) # Class: (lung hilus) AnnotationAssertion(Annotation( "GOC:lung_mtg") Annotation( "ISBN:0721662544") "A depression on the surface of the lung where the bronchus, blood vessels and nerves enter.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:36005") AnnotationAssertion( "FMA:7330") AnnotationAssertion( "MA:0003099") AnnotationAssertion( "NCIT:C49282") AnnotationAssertion(Annotation( "ncithesaurus:Hilar_Area_of_the_Lung") "UMLS:C0225701") AnnotationAssertion( "hilum of lung") AnnotationAssertion(Annotation( "FMA:7330") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "hilum pulmonis") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "hilus of lung") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "lung hilum") AnnotationAssertion(Annotation( "FMA:7330") "pulmonary hilum") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "pulmonary hilus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004886") AnnotationAssertion(rdfs:label "lung hilus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (left lung hilus) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A lung hilus that is part of the left lung.") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000483") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( ) "The part of the left lung that is not covered by pleura and through which blood vessels, bronchi, nerves and lymphatics enter and leave the lung. [TFD][VHOG]") AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0000962") AnnotationAssertion( "EHDAA:4965") AnnotationAssertion( "EMAPA:17980") AnnotationAssertion( "FMA:9751") AnnotationAssertion( "MA:0001781") AnnotationAssertion( "VHOG:0000483") AnnotationAssertion( "hilum of left lung") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "hilus of left lung") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "left lung hilum") AnnotationAssertion(Annotation( "FMA:9751") "left pulmonary hilum") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "left pulmonary hilus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004887") AnnotationAssertion(rdfs:label "left lung hilus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (right lung hilus) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A lung hilus that is part of the right lung.") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000482") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( ) "The part of the right lung that is not covered by pleura and through which blood vessels, bronchi, nerves and lymphatics enter and leave the lung. [TFD][VHOG]") AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0001756") AnnotationAssertion( "EHDAA:4995") AnnotationAssertion( "EMAPA:17996") AnnotationAssertion( "FMA:7456") AnnotationAssertion( "MA:0001790") AnnotationAssertion( "VHOG:0000482") AnnotationAssertion( "hilum of right lung") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "hilus of right lung") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "right lung hilum") AnnotationAssertion(Annotation( "FMA:7330") "right pulmonary hilum") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "right pulmonary hilus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004888") AnnotationAssertion(rdfs:label "right lung hilus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lobar bronchus vasculature) AnnotationAssertion(Annotation( "LG:0012616") "Vasculature that is composed of the tubule structures that carry blood or lymph in the lungs.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004889") AnnotationAssertion(rdfs:label "lobar bronchus vasculature") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (right lung accessory lobe) AnnotationAssertion(Annotation( "LG:0012619") "A specialized lobe of the right lung that extends to the left side of the organism.") AnnotationAssertion(Annotation( "ISBN:0123813611"^^xsd:string) "In mouse this is sometimes divided into intermediate and diaphragmatic lobes") AnnotationAssertion( "in humans, the right lung typically has 3 lobes (superior, middle, inferior). The lobar fissures are often incomplete, making a connection between two apposed lobes. Conversely, more than the expected number of lobes may be produced by new fissures e.g. the azygous lobe of the lung. The additional lobes are termed 'accessory lobes' -- http://www.gpnotebook.co.uk/simplepage.cfm?ID=1120927803") AnnotationAssertion( "EHDAA2:0001731") AnnotationAssertion( "EHDAA:4971") AnnotationAssertion( "EMAPA:17981") AnnotationAssertion( "MA:0000427") AnnotationAssertion( "VHOG:0000831") AnnotationAssertion(Annotation( "MA:0000427") "right lung postcaval lobe") AnnotationAssertion(Annotation( "ISBN:0123813611"^^xsd:string) "diaphragmatic lobe") AnnotationAssertion(Annotation( "ISBN:0123813611"^^xsd:string) "intermediate lobe of right lung") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004890") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "right lung accessory lobe") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete lobar bronchus bronchiole) AnnotationAssertion( "this class was obsoleted as it was generated from an incorrect inference from EMAPA") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004891") AnnotationAssertion(rdfs:label "obsolete lobar bronchus bronchiole") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (lobar bronchus alveolar system) AnnotationAssertion(Annotation( "LG:0012622") "The lobar bronchus alveolar system is where molecules of oxygen and carbon dioxide are passively exchanged, by diffusion, between the gaseous environment and the blood in the lobar bronchus.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004892") AnnotationAssertion(rdfs:label "lobar bronchus alveolar system") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (interalveolar septum) AnnotationAssertion(Annotation( ) Annotation( "LG:0012625") "A the thin septum that separates adjacent pulmonary alveoli, containing connective tissue constituents of the respiratory tissue and the capillary network of the blood supply of the lung.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0003149") AnnotationAssertion( "EMAPA:35433") AnnotationAssertion( "MA:0000421") AnnotationAssertion( "NCIT:C49473") AnnotationAssertion(Annotation( "ncithesaurus:Alveolar_Septum") "UMLS:C1706784") AnnotationAssertion(Annotation( ) "alveolar septum") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0003149") "septum interalveolare") AnnotationAssertion( "UBERON:0004893") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "interalveolar septum") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (alveolar wall) AnnotationAssertion(Annotation( "LG:0012626") Annotation( "MP:0010903") "A wall that contains the alveoli.") AnnotationAssertion(Annotation( "FMA"^^xsd:string) "part of wall in FMA") AnnotationAssertion( "UBERON:0008872") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0002543") AnnotationAssertion( "EMAPA:35120") AnnotationAssertion( "FMA:14117") AnnotationAssertion( "MA:0002568") AnnotationAssertion( "NCIT:C13085") AnnotationAssertion(Annotation( "ncithesaurus:Alveolar_Wall") "UMLS:C0225695") AnnotationAssertion(Annotation( "FMA:14117") "pulmonary alveolar wall") AnnotationAssertion(Annotation( "FMA:14117") "pulmonary interalveolar septum") AnnotationAssertion(Annotation( "FMA:14117") "wall of pulmonary alveolus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "EMAPA:35120") "alveolus wall") AnnotationAssertion( "UBERON:0004894") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "alveolar wall") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (alveolar smooth muscle) AnnotationAssertion(Annotation( "LG:0012628") "Alveolar smooth muscle is a type of non-striated muscle, found within the walls of the alveolus.") AnnotationAssertion( "EMAPA:35122") AnnotationAssertion( "MA:0002759") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004895") AnnotationAssertion(rdfs:label "alveolar smooth muscle") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (right lung accessory lobe lobar bronchus) AnnotationAssertion(Annotation( "LG:0012636") "The right lung accessory lobe lobar bronchus is the major airway within the right lung accessory lobe that starts at the division of the bronchus on the right side and ends at the point of its own subdivision into tertiary or segmental bronchi.") AnnotationAssertion(Annotation( "EMAPA:17982") "lobar bronchus of accessory lobe") AnnotationAssertion( "EHDAA2:0001736") AnnotationAssertion( "EMAPA:17982") AnnotationAssertion( "VHOG:0000239") AnnotationAssertion(Annotation( "VHOG:0000239") "lobar bronchus of right lung accessory lobe") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004896") AnnotationAssertion(rdfs:label "right lung accessory lobe lobar bronchus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (right lung accessory lobe lobar bronchus mesenchyme) AnnotationAssertion(Annotation( "LG:0012640") "The right lung accessory lobe lobar bronchus mesenchyme is a type of tissue made up of loosely-packed mesenchymal cells in the right lung accessory lobe lobar bronchus.") AnnotationAssertion( "EMAPA:17983") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004897") AnnotationAssertion(rdfs:label "right lung accessory lobe lobar bronchus mesenchyme") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete right lung caudal lobe lobar bronchus mesenchyme) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004898") AnnotationAssertion(rdfs:label "obsolete right lung caudal lobe lobar bronchus mesenchyme") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (right lung cranial lobe lobar bronchus mesenchyme) AnnotationAssertion(Annotation( "LG:0012659") "The right lung cranial lobe lobar bronchus mesenchyme is a type of tissue made up of loosely-packed mesenchymal cells in the right lung cranial lobe lobar bronchus.") AnnotationAssertion( "EMAPA:17993") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004899") AnnotationAssertion(rdfs:label "right lung cranial lobe lobar bronchus mesenchyme") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (right lung middle lobe lobar bronchus mesenchyme) AnnotationAssertion(Annotation( "LG:0012672") "The right lung middle lobe lobar bronchus mesenchyme is a type of tissue made up of loosely-packed mesenchymal cells in the right lung middle lobe lobar bronchus.") AnnotationAssertion( "EMAPA:17999") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004900") AnnotationAssertion(rdfs:label "right lung middle lobe lobar bronchus mesenchyme") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (right lung lobar bronchus mesenchyme) AnnotationAssertion(Annotation( "LG:0012681") "The right lung lobar bronchus mesenchyme is a type of tissue made up of loosely-packed mesenchymal cells in the right lung lobar bronchus.") AnnotationAssertion( "EMAPA:17665") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004901") AnnotationAssertion(rdfs:label "right lung lobar bronchus mesenchyme") SubClassOf( ) SubClassOf( ) # Class: (urogenital sinus epithelium) AnnotationAssertion(Annotation( ) "The fetal urogenital sinus (from which the prostate derives) is a simple cylinder of stratified basal epithelium, surrounded by mesenchyme and positioned between the embryonic bladder and pelvic urethra.") AnnotationAssertion(Annotation( "EHDAA2"^^xsd:string) "we follow EHDAA2 in dividing the UGS into epithelium and lumen") AnnotationAssertion( "EHDAA2:0004061") AnnotationAssertion( "EMAPA:31509") AnnotationAssertion(Annotation( ) "UGE") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelium of urogenital sinus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004902") AnnotationAssertion(rdfs:label "urogenital sinus epithelium") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (bronchoalveolar duct junction) AnnotationAssertion(Annotation( "MP:0004390") "A branch point connecting the respiratory bronchioles to the alveolar ducts[MP].") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37448") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004903") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "bronchoalveolar duct junction") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (neuron projection bundle connecting eye with brain) AnnotationAssertion(Annotation( ) "A neuron projection bundle that connects the retina or its analog in the eye with the brain. This includes the vertebrate optic nerve (not truly a nerve) as well as analogous structures such as the Bolwig nerve in Drosophila.") AnnotationAssertion(Annotation( "BTO:0000966") "optic nerve") AnnotationAssertion( "BTO:0000966") AnnotationAssertion( "EV:0100351") AnnotationAssertion( "FBbt:00001956") AnnotationAssertion( "TADS:0000232") AnnotationAssertion( "optic nerve (generic)") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004904") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "for the vertebrate-specific structure, see UBERON:0000941 (cranial nerve II)") AnnotationAssertion(rdfs:label "neuron projection bundle connecting eye with brain") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (articulation) AnnotationAssertion(Annotation( ) "Anatomical cluster that connects two or more adjacent skeletal elements or hardened body parts.") AnnotationAssertion( "FBbt:00005811") AnnotationAssertion( "joint") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004905") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "articulation") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (ectodermal part of digestive tract) AnnotationAssertion(Annotation( "GO:0007439") "A portion of the gut that is derived from ectoderm.") AnnotationAssertion( "ectodermal gut") AnnotationAssertion(Annotation( "EMAPA:32930") "gut ectoderm") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004906") AnnotationAssertion(rdfs:label "ectodermal part of digestive tract") SubClassOf( ) SubClassOf( ) # Class: (lower digestive tract) AnnotationAssertion(Annotation( ) "The region of the digestive tract extending from the beginning of the intestines to the anus[GO - gut definition].") AnnotationAssertion(Annotation( "MA"^^xsd:string) "MA class was moved from here. See https://github.com/obophenotype/uberon/issues/509") AnnotationAssertion(Annotation( "FMA"^^xsd:string) "WP: small intestine, large intestine, anus. Anal canal not part of LGIT according to FMA, but anus is considered part of LGIT according to WP. Duodenum overlaps both U/L") AnnotationAssertion(Annotation( "GO:0048565") "gut") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:49179") AnnotationAssertion( "NCIT:C33010") AnnotationAssertion(Annotation( "ncithesaurus:Lower_Gastrointestinal_Tract") "UMLS:C0226875") AnnotationAssertion( "galen:LowerGastrointestinalTract") AnnotationAssertion( "lower GI tract") AnnotationAssertion( "lower gastrointestinal tract") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004907") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "lower digestive tract") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (upper digestive tract) AnnotationAssertion(Annotation( ) "The region of the digestive tract extending from the mouth cavity through pharynx esophagus stomach and duodenum.") AnnotationAssertion(Annotation( "FMA"^^xsd:string) "WP: small intestine, large intestine, anus. Anal canal not part of LGIT according to FMA, but anus is considered part of LGIT according to WP. Duodenum overlaps both U/L. In Galen, entire GI tract excludes esophagus") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:49177") AnnotationAssertion( "NCIT:C33837") AnnotationAssertion(Annotation( "ncithesaurus:Upper_Gastrointestinal_Tract") "UMLS:C0226874") AnnotationAssertion( "galen:UpperGastrointestinalTract") AnnotationAssertion( "upper GI tract") AnnotationAssertion( "upper gastrointestinal tract") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004908") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "upper digestive tract") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (epithelium of gonad) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An epithelium surrounding a gonad.") AnnotationAssertion( "after reasoning this should subsume the more specific germinal epithelium classes. We include the fly structure here although it is not clear if the sheath is an epithelium or a multi-tissue structure that includes epithelium as parts") AnnotationAssertion( ) AnnotationAssertion( "EHDAA:4032") AnnotationAssertion( "EHDAA:5931") AnnotationAssertion( "FBbt:00004859") AnnotationAssertion( "NCIT:C32676") AnnotationAssertion(Annotation( "ncithesaurus:Germinal_Epithelium") "UMLS:C1517534") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "gonad epithelium") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "gonadal epithelium") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FBbt:00004859") "gonadal sheath") AnnotationAssertion( "UBERON:0004909") AnnotationAssertion(rdfs:label "epithelium of gonad") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (epithelium of male gonad) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An epithelium surrounding a testis.") AnnotationAssertion( "after reasoning this should subsume the more specific germinal epithelium classes. We include the fly structure here although it is not clear if the sheath is an epithelium or a multi-tissue structure that includes epithelium as parts") AnnotationAssertion( "BTO:0001364") AnnotationAssertion( "EMAPA:17973") AnnotationAssertion( "FBbt:00004955") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "testis epithelium") AnnotationAssertion(Annotation( "FBbt:00004955") Annotation( ) "testis sheath") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004910") AnnotationAssertion(rdfs:label "epithelium of male gonad") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (epithelium of female gonad) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An epithelium surrounding an ovary.") AnnotationAssertion( "after reasoning this should subsume the more specific germinal epithelium classes. We include the fly structure here although it is not clear if the sheath is an epithelium or a multi-tissue structure that includes epithelium as parts") AnnotationAssertion( "BTO:0003661") AnnotationAssertion( "FBbt:00004896") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "ovarian epithelium") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "ovary epithelium") AnnotationAssertion(Annotation( "FBbt:00004896") Annotation( ) "ovarian sheath") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004911") AnnotationAssertion(rdfs:label "epithelium of female gonad") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (biliary bud) AnnotationAssertion( "EHDAA2:0000171") AnnotationAssertion( "EMAPA:16561") AnnotationAssertion( "EMAPA_RETIRED:16565") AnnotationAssertion( "VHOG:0001351") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "EMAPA:16561") "hepatic diverticulum") AnnotationAssertion( "UBERON:0004912") AnnotationAssertion(rdfs:label "biliary bud") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/4/4f/Gray1088.png"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2-modified") ObjectSomeValuesFrom( )) # Class: (hepatopancreatic ampulla) AnnotationAssertion(Annotation( ) "A dilation of the duodenal papilla that is the opening of the juncture of the common bile duct and the main pancreatic duct.") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0005167") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:ZDB-PUB-070212-11") Annotation( "ZFIN:ZDB-PUB-080414-12") "Ampulla formed by the union of the pancreatic duct and the common bile duct where they enter the intestine.[TAO]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "CALOHA:TS-2348") AnnotationAssertion( "FMA:15076") AnnotationAssertion( "GAID:283") AnnotationAssertion( "MESH:A03.159.183.079.300.900") AnnotationAssertion( "NCIT:C13011") AnnotationAssertion( "TAO:0005167") AnnotationAssertion(Annotation( "ncithesaurus:Ampulla_of_Vater") "UMLS:C0042425") AnnotationAssertion( "ZFA:0005167") AnnotationAssertion( "galen:AmpullaOfVater") AnnotationAssertion( "Vater's ampulla") AnnotationAssertion(Annotation( "FMA:15076") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "ampulla biliaropancreatica") AnnotationAssertion( "ampulla of Vater") AnnotationAssertion(Annotation( "FMA:15076") "ampulla of bile duct") AnnotationAssertion( "biliaropancreatic ampulla") AnnotationAssertion(Annotation( "ZFA:0005167") "papilla Vateri") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "ampulla Vaterii") AnnotationAssertion(Annotation( ) Annotation( ) "ampulla hepatopancreatica") AnnotationAssertion(Annotation( "ZFA:0005167") "papilla duodeni major") AnnotationAssertion( "UBERON:0004913") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "hepatopancreatic ampulla") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/1/1e/Biliary_system_new.svg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (duodenal papilla) AnnotationAssertion(Annotation( ) "One of the two small elevations on the mucosa of the duodenum, the major at the entrance of the conjoined pancreatic and common bile ducts and the minor at the entrance of the accessory pancreatic duct.") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:18662") AnnotationAssertion( "FMA:15953") AnnotationAssertion( "MA:0003107") AnnotationAssertion( "NCIT:C119578") AnnotationAssertion( "papilla duodenalis") AnnotationAssertion( "papilla of duodenum") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "papilla duodeni") AnnotationAssertion( "UBERON:0004914") AnnotationAssertion(rdfs:label "duodenal papilla") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/4/43/Gray1057.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (sphincter of hepatopancreatic ampulla) AnnotationAssertion(Annotation( ) "Muscular valve that controls the flow of digestive juices (bile and pancreatic juice) through the ampulla of Vater into the second part of the duodenum. Relaxed by the hormone Cholecystokinin (CCK) via vasoactive intestinal polypeptide (VIP).[WP].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:18663") AnnotationAssertion( "FMA:15077") AnnotationAssertion( "GAID:285") AnnotationAssertion( "MESH:A03.159.183.079.300.900.600") AnnotationAssertion( "NCIT:C13065") AnnotationAssertion(Annotation( "ncithesaurus:Sphincter_of_Oddi") "UMLS:C0028872") AnnotationAssertion( "Oddi's sphincter") AnnotationAssertion(Annotation( "FMA:15077") "hepatopancreatic ampullary sphincter") AnnotationAssertion(Annotation( "FMA:15077") "musculus sphincter ampullae") AnnotationAssertion(Annotation( "FMA:15077") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "musculus sphincter ampullae hepatopancreatica") AnnotationAssertion( "sphincter of Oddi") AnnotationAssertion(Annotation( "FMA:15077") "sphincter of ampulla of vater") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004915") AnnotationAssertion(rdfs:label "sphincter of hepatopancreatic ampulla") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/4/43/Gray1057.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (anal sphincter) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A sphincter muscle that is part of a anal region.") AnnotationAssertion( "EMAPA:36052") AnnotationAssertion( "anal region sphincter") AnnotationAssertion( "sphincter analia") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004916") AnnotationAssertion(rdfs:label "anal sphincter") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (urethral sphincter) AnnotationAssertion(Annotation( ) "A sphincter muscle surrounding the urethra.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37789") AnnotationAssertion( "MA:0002650") AnnotationAssertion( "sphincter muscle of urethra") AnnotationAssertion( "sphincter of urethra") AnnotationAssertion( "sphincter urethrae") AnnotationAssertion( "urethral sphincter muscle") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004917") AnnotationAssertion(rdfs:label "urethral sphincter") SubClassOf( ) SubClassOf( ) # Class: (internal urethral sphincter) AnnotationAssertion(Annotation( ) "A urethral sphincter muscle which constricts the internal urethral orifice. It is the junction of the urethra with the urinary bladder. The muscle is made of smooth muscle, so therefore it is under involuntary control. It is kept tonically contracted by the sympathetic nervous system and during micturition, is relaxed via the parasympathetic nervous system. This is the primary muscle for preventing the release of urine[WP].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:45769") AnnotationAssertion( "internal sphincter muscle of urethra") AnnotationAssertion( "internal sphincter of urethra") AnnotationAssertion( "internal urethral sphincter muscle") AnnotationAssertion(Annotation( "FMA:45769") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "musculus sphincter supracollicularis") AnnotationAssertion(Annotation( "FMA:45769") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "musculus sphincter urethrae internus") AnnotationAssertion(Annotation( "FMA:45769") "preprostatic sphincter") AnnotationAssertion(Annotation( "FMA:45769") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "sphincter urethrae internus") AnnotationAssertion(Annotation( "FMA:45769") "supracollicular sphincter") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "musculus sphincter urethrae internus") AnnotationAssertion( "UBERON:0004918") AnnotationAssertion(rdfs:label "internal urethral sphincter") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/b/ba/Gray407.png"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "Sympathetics from L1-L2 through lumbar splanchnic and hypogastric/pelvic plexus") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "Sympathetics from L1-L2 through lumbar splanchnic and hypogastric/pelvic plexus") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (external urethral sphincter) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37790") AnnotationAssertion( "FMA:85274") AnnotationAssertion( "MA:0002401") AnnotationAssertion( "NCIT:C52561") AnnotationAssertion(Annotation( "ncithesaurus:Urethralis") "UMLS:C1710586") AnnotationAssertion( "annulus urethralis") AnnotationAssertion( "external sphincter muscle of urethra") AnnotationAssertion( "external sphincter of urethra") AnnotationAssertion( "external urethral sphincter muscle") AnnotationAssertion(Annotation( ) "m. urethralis") AnnotationAssertion(Annotation( ) Annotation( "MA:0002401") "urethralis") AnnotationAssertion(Annotation( ) "urethralis muscle") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "musculus sphincter urethrae membranaceae") AnnotationAssertion( "UBERON:0004919") AnnotationAssertion(rdfs:label "external urethral sphincter") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/7/70/Gray1166.png"^^xsd:anyURI) AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/d/d7/Gray1142.png"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "Junction of the inferior rami of the pubis and ischium to the extent of 1.25 to 2 cm.") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "Junction of the inferior rami of the pubis and ischium to the extent of 1.25 to 2 cm.") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (obsolete mesoderm of gonad) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A mesoderm that is part of a gonad [Automatically generated definition].") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "gonad mesoderm") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "gonadal mesoderm") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004920") AnnotationAssertion(rdfs:label "obsolete mesoderm of gonad") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (subdivision of digestive tract) AnnotationAssertion(Annotation( ) "A proximal-distal subdivision of the digestive tract.") AnnotationAssertion( "intended to denote both embryonic and adult structures. Note the FMA grouping here is not quite correct.") AnnotationAssertion( "FBbt:00100315") AnnotationAssertion( "FMA:71131") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:71131") "alimentary system subdivision") AnnotationAssertion( "intestinal tract") AnnotationAssertion( "segment of intestinal tract") AnnotationAssertion(Annotation( "FMA:71131") "subdivision of alimentary system") AnnotationAssertion( "UBERON:0004921") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "subdivision of digestive tract") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (postnatal subventricular zone) AnnotationAssertion(Annotation( "MP:0004275") "A mitotically active layer of cells surrounding the brain ventricles in the adult that consists of migrating neuroblasts, astrocytes and transitory amplifying progenitor cells[MP].") AnnotationAssertion(Annotation( ) "A paired brain structure situated throughout the lateral walls of the lateral ventricles. It has been associated with having four distinct layers of variable thickness and cell density, as well as cellular composition[WP][Wikipedia:Subventricular_zone].") AnnotationAssertion(Annotation( "BTO:0003090") "The subventricular zone (SVZ) is a paired brain structure situated throughout the lateral walls of the lateral ventricles. Along with the subgranular zone of dentate gyrus, subventricular zone serves as a source of neural stem cells in the process of adult neurogenesis. It harbors the largest population of proliferating cells in the adult brain of rodents, monkeys and humans. Neurons generated in SVZ travel to the olfactory bulb via the rostral migratory stream[BTO:0003090].") AnnotationAssertion(Annotation( "NLX:144262") "The subventricular zone (SVZ) is one of two sources of adult-born neurons in the mammalian brain, the other being the subgranular zone (SGZ) of the hippocampus. In most adult mammals, the SVZ is a three-layered sheath that lies along the lateral wall of the lateral ventricle and consists of type A, B, and C cells. Type A rest along the ventricle wall and are neuronal precursor cells, Type B are adjacent astrocytes, and Type C are immature precursors to the Type A neuroblasts. The neuronal precursor cells travel along the rostral migratory stream ensheathed in a tube of Type B astrocytes, until they reach the olfactory bulb. There they integrate into the existing cellular network and mature into local interneurons. While the majority become adult-born granule cells, a subset become periglomerular cells. Interestingly, the human SVZ differs from other mammals' in several ways. It consists of four layers rather than three: ependymal cells (layer I), a hypo cellular gap (layer II), a ribbon of astrocytes (layer III), and a transitional zone (layer IV). The astrocytes are capable of differentiating into many kinds of tissue including new neurons. However, there is no evidence that the proliferating neurons travel along the rostral migratory stream in a chain to populate the olfactory bulb with new interneurons, as is the case for other mammals[NLX:144262].") AnnotationAssertion( "WP divides this into 4 layers.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:SEL") AnnotationAssertion( "BAMS:SEZ") AnnotationAssertion( "BTO:0003090") AnnotationAssertion( "DHBA:10536") AnnotationAssertion( "EMAPA:32804") AnnotationAssertion( "MA:0000817") AnnotationAssertion( "MBA:98") AnnotationAssertion( "NLX:144262") AnnotationAssertion( "PBA:294021970") AnnotationAssertion(Annotation( "MP:0004275") Annotation( ) "SEZ") AnnotationAssertion(Annotation( "MP:0004275") Annotation( ) "SVZ") AnnotationAssertion(Annotation( "MP:0004275") "adult subventricular zone") AnnotationAssertion(Annotation( "MA:0000817") "brain subventricular zone") AnnotationAssertion(Annotation( "MP:0004275") "postnatal subventricular zone") AnnotationAssertion(Annotation( "MA:0000817") "subventricular zone") AnnotationAssertion( "subventricular zone of brain") AnnotationAssertion( "uberon") AnnotationAssertion( "postnatal subependymal layer") AnnotationAssertion( "postnatal subependymal plate") AnnotationAssertion( "postnatal subependymal zone") AnnotationAssertion(Annotation( "MP:0004275") "subependymal layer") AnnotationAssertion(Annotation( "MP:0004275") "subependymal plate") AnnotationAssertion(Annotation( "MP:0004275") "subependymal zone") AnnotationAssertion( "UBERON:0004922") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "postnatal subventricular zone") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "GO"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (organ component layer) AnnotationAssertion(Annotation( ) "A part of a wall of an organ that forms a layer.") AnnotationAssertion( "FMA:82485") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004923") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "organ component layer") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (submucosa of pharynx) AnnotationAssertion(Annotation( "BTO:0002113") "The tissue underlying the tunica mucosa of the pharynx.") AnnotationAssertion( ) AnnotationAssertion( "BTO:0002113") AnnotationAssertion( "FMA:75144") AnnotationAssertion(Annotation( "FMA:75144") "pharyngeal submucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "pharynx submucosa") AnnotationAssertion(Annotation( "FMA:75144") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "tela submucosa pharyngea") AnnotationAssertion(Annotation( "BTO:0002113") Annotation( ) "tela submucosa pharyngis") AnnotationAssertion( "uberon") AnnotationAssertion( "pharyngobasilar fascia") AnnotationAssertion(Annotation( "BTO:0002113") "submucous coat of pharynx") AnnotationAssertion(Annotation( "BTO:0002113") "submucous layer of pharynx") AnnotationAssertion( "UBERON:0004924") AnnotationAssertion(rdfs:label "submucosa of pharynx") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (submucosa of laryngopharynx) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A submucosa that is part of a hypopharynx [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( "FMA:55072") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "hypopharynx submucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "laryngeal pharynx submucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "laryngopharynx submucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "submucosa of hypopharynx") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "submucosa of laryngeal pharynx") AnnotationAssertion(Annotation( "FMA:55072") "tela submucosa (pars laryngea pharyngis)") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004925") AnnotationAssertion(rdfs:label "submucosa of laryngopharynx") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (submucosa of cystic duct) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A submucosa that is part of a cystic duct [Automatically generated definition].") AnnotationAssertion( "FMA:18013") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "cystic duct submucosa") AnnotationAssertion(Annotation( "FMA:18013") "cystic ductal submucosa") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004926") AnnotationAssertion(rdfs:label "submucosa of cystic duct") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (submucosa of cecum) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A submucosa that is part of a cecum [Automatically generated definition].") AnnotationAssertion( "FMA:14999") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "caecum submucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "cecum submucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "intestinum crassum caecum submucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "submucosa of caecum") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "submucosa of intestinum crassum caecum") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004927") AnnotationAssertion(rdfs:label "submucosa of cecum") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (submucosa of appendix) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A submucosa that is part of an appendix [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( "FMA:14992") AnnotationAssertion(Annotation( "FMA:14992") "appendiceal submucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "appendix submucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "caecal appendix submucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "submucosa of caecal appendix") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "submucosa of vermiform appendix") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "submucosa of vermix") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "vermiform appendix submucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "vermix submucosa") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004928") AnnotationAssertion(rdfs:label "submucosa of appendix") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (submucosa of ascending colon) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A submucosa that is part of an ascending colon [Automatically generated definition].") AnnotationAssertion( "FMA:15006") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "ascending colon submucosa") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004929") AnnotationAssertion(rdfs:label "submucosa of ascending colon") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (submucosa of transverse colon) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A submucosa that is part of a transverse colon [Automatically generated definition].") AnnotationAssertion( "FMA:15013") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "transverse colon submucosa") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004930") AnnotationAssertion(rdfs:label "submucosa of transverse colon") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (submucosa of descending colon) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A submucosa that is part of a descending colon [Automatically generated definition].") AnnotationAssertion( "FMA:15020") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "descending colon submucosa") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004931") AnnotationAssertion(rdfs:label "submucosa of descending colon") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (submucosa of sigmoid colon) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A submucosa that is part of a sigmoid colon [Automatically generated definition].") AnnotationAssertion( "FMA:15027") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "sigmoid colon submucosa") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004932") AnnotationAssertion(rdfs:label "submucosa of sigmoid colon") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (submucosa of fundus of stomach) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A submucosa that is part of a fundus of stomach [Automatically generated definition].") AnnotationAssertion( "EMAPA:27153") AnnotationAssertion( "FMA:17058") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "fundus gastricus (ventricularis) submucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "fundus of stomach submucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "stomach fundus submucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "submucosa of fundus gastricus (ventricularis)") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "submucosa of stomach fundus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004933") AnnotationAssertion(rdfs:label "submucosa of fundus of stomach") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (submucosa of body of stomach) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A submucosa that is part of a body of stomach [Automatically generated definition].") AnnotationAssertion( "FMA:17059") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "body of stomach submucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "corpus gastricum (ventriculare) submucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "gastric body submucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "stomach body submucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "submucosa of corpus gastricum (ventriculare)") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "submucosa of gastric body") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "submucosa of stomach body") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004934") AnnotationAssertion(rdfs:label "submucosa of body of stomach") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (submucosa of cardia of stomach) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A submucosa that is part of a cardia of stomach [Automatically generated definition].") AnnotationAssertion( "FMA:17457") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "cardia of stomach submucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "cardial part of stomach submucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "gastric cardia submucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "pars cardiaca (gaster) submucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "stomach cardiac region submucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "submucosa of cardial part of stomach") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "submucosa of gastric cardia") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "submucosa of pars cardiaca (gaster)") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "submucosa of stomach cardiac region") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004935") AnnotationAssertion(rdfs:label "submucosa of cardia of stomach") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (submucosa of pyloric antrum) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A submucosa that is part of a pyloric antrum [Automatically generated definition].") AnnotationAssertion( "FMA:17060") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "antrum of stomach submucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "pyloric antrum submucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "stomach pyloric antrum submucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "submucosa of antrum of stomach") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "submucosa of stomach pyloric antrum") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004936") AnnotationAssertion(rdfs:label "submucosa of pyloric antrum") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (submucosa of pylorus) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A submucosa that is part of a pylorus [Automatically generated definition].") AnnotationAssertion( "EMAPA:27201") AnnotationAssertion( "FMA:17462") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "pyloric part of stomach submucosa") AnnotationAssertion( "pyloric submucosa") AnnotationAssertion(Annotation( "FMA:17462") "pylorus submucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "pylorus submucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "stomach pyloric region submucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "submucosa of pyloric part of stomach") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "submucosa of stomach pyloric region") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004937") AnnotationAssertion(rdfs:label "submucosa of pylorus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (submucosa of biliary tree) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A submucosa that is part of a biliary tree [Automatically generated definition].") AnnotationAssertion( "FMA:18009") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "biliary tract submucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "biliary tree submucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "submucosa of biliary tract") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004938") AnnotationAssertion(rdfs:label "submucosa of biliary tree") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (submucosa of common bile duct) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A submucosa that is part of a common bile duct [Automatically generated definition].") AnnotationAssertion( "FMA:18011") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "common bile duct submucosa") AnnotationAssertion(Annotation( "FMA:18011") "common bile ductal submucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "ductus choledochus (biliaris) submucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "submucosa of ductus choledochus (biliaris)") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004939") AnnotationAssertion(rdfs:label "submucosa of common bile duct") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (submucosa of common hepatic duct) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A submucosa that is part of a common hepatic duct [Automatically generated definition].") AnnotationAssertion( "FMA:18014") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "common hepatic duct submucosa") AnnotationAssertion(Annotation( "FMA:18014") "common hepatic ductal submucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "hepatic duct submucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "submucosa of hepatic duct") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004940") AnnotationAssertion(rdfs:label "submucosa of common hepatic duct") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (submucosa of right hepatic duct) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A submucosa that is part of a right hepatic duct [Automatically generated definition].") AnnotationAssertion( "FMA:18015") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "right hepatic duct submucosa") AnnotationAssertion(Annotation( "FMA:18015") "right hepatic ductal submucosa") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004941") AnnotationAssertion(rdfs:label "submucosa of right hepatic duct") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (submucosa of left hepatic duct) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A submucosa that is part of a left hepatic duct [Automatically generated definition].") AnnotationAssertion( "FMA:18017") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "left hepatic duct submucosa") AnnotationAssertion(Annotation( "FMA:18017") "left hepatic ductal submucosa") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004942") AnnotationAssertion(rdfs:label "submucosa of left hepatic duct") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (submucosa of urinary bladder) AnnotationAssertion(Annotation( "BTO:0002117") "The submucous layer of the wall of the urinary bladder.") AnnotationAssertion( ) AnnotationAssertion( "BTO:0002117") AnnotationAssertion( "EMAPA:32275") AnnotationAssertion( "FMA:15929") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bladder submucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "submucosa of bladder") AnnotationAssertion(Annotation( "FMA:15929") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "tela submucosa (vesica urinaria)") AnnotationAssertion(Annotation( "FMA:15929") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "tela submucosa vesicae") AnnotationAssertion(Annotation( "BTO:0002117") "tela submucosa vesicae urinariae") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "urinary bladder submucosa") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0002117") "submucous layer of urinary bladder") AnnotationAssertion( "UBERON:0004943") AnnotationAssertion(rdfs:label "submucosa of urinary bladder") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (submucosa of trigone of urinary bladder) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A submucosa that is part of a trigone of urinary bladder [Automatically generated definition].") AnnotationAssertion( "EMAPA:32304") AnnotationAssertion( "FMA:17852") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "Lieutaud ' s trigone submucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "deep trigone submucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "submucosa of Lieutaud ' s trigone") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "submucosa of deep trigone") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "submucosa of trigone of bladder") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "submucosa of urinary bladder trigone") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "submucosa of vesical trigone") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "trigone of bladder submucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "trigone of urinary bladder submucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "urinary bladder trigone submucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "vesical trigone submucosa") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004944") AnnotationAssertion(rdfs:label "submucosa of trigone of urinary bladder") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (submucosa of neck of urinary bladder) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A submucosa that is part of a neck of urinary bladder [Automatically generated definition].") AnnotationAssertion( "EMAPA:32276") AnnotationAssertion( "FMA:17851") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bladder neck submucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "neck of bladder submucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "neck of urinary bladder submucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "submucosa of bladder neck") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "submucosa of neck of bladder") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "submucosa of urinary bladder neck") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "submucosa of vesical neck") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "urinary bladder neck submucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "vesical neck submucosa") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004945") AnnotationAssertion(rdfs:label "submucosa of neck of urinary bladder") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (submucosa of ileum) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A submucosa that is part of a ileum [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( "FMA:14957") AnnotationAssertion(Annotation( "FMA:14957") "ileal submucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "ileum submucosa") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004946") AnnotationAssertion(rdfs:label "submucosa of ileum") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (submucosa of right main bronchus) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A submucosa that is part of a right main bronchus [Automatically generated definition].") AnnotationAssertion( "FMA:13139") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "right bronchus submucosa") AnnotationAssertion(Annotation( "FMA:13139") "right main bronchial submucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "right main bronchus submucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "right principal bronchus submucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "submucosa of right bronchus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "submucosa of right principal bronchus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004947") AnnotationAssertion(rdfs:label "submucosa of right main bronchus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (submucosa of left main bronchus) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A submucosa that is part of a left main bronchus [Automatically generated definition].") AnnotationAssertion( "FMA:13140") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "left bronchus submucosa") AnnotationAssertion(Annotation( "FMA:13140") "left main bronchial submucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "left main bronchus submucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "left principal bronchus submucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "submucosa of left bronchus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "submucosa of left principal bronchus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004948") AnnotationAssertion(rdfs:label "submucosa of left main bronchus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (submucosa of main bronchus) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A submucosa that is part of a main bronchus [Automatically generated definition].") AnnotationAssertion( "FMA:13118") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bronchus principalis submucosa") AnnotationAssertion(Annotation( "FMA:13118") "main bronchial submucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "main bronchus submucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "primary bronchus submucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "principal bronchus submucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "submucosa of bronchus principalis") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "submucosa of primary bronchus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "submucosa of principal bronchus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004949") AnnotationAssertion(rdfs:label "submucosa of main bronchus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (submucosa of lobar bronchus) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A submucosa that is part of a lobar bronchus [Automatically generated definition].") AnnotationAssertion( "FMA:62669") AnnotationAssertion(Annotation( "FMA:62669") "lobar bronchial submucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "lobar bronchus submucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "secondary bronchus submucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "submucosa of secondary bronchus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004950") AnnotationAssertion(rdfs:label "submucosa of lobar bronchus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (submucosa of segmental bronchus) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A submucosa that is part of a segmental bronchus [Automatically generated definition].") AnnotationAssertion( "FMA:62670") AnnotationAssertion(Annotation( "FMA:62670") "segmental bronchial submucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "segmental bronchus submucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "submucosa of tertiary bronchus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "tertiary bronchus submucosa") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004951") AnnotationAssertion(rdfs:label "submucosa of segmental bronchus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (submucosa of bronchiole) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A submucosa that is part of a bronchiole [Automatically generated definition].") AnnotationAssertion( "FMA:62775") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bronchiole submucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "lobular bronchiole submucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "submucosa of lobular bronchiole") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004952") AnnotationAssertion(rdfs:label "submucosa of bronchiole") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (mucosa of ureter) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A mucosa that is part of a ureter [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( "FMA:15894") AnnotationAssertion( "galen:MucousMembraneOfUreter") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of organ of ureter") AnnotationAssertion(Annotation( "FMA:15894") "mucosal layer of ureter") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucous membrane of ureter") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "organ mucosa of ureter") AnnotationAssertion(Annotation( "FMA:15894") "tunica mucosa (ureter)") AnnotationAssertion(Annotation( "FMA:15894") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "tunica mucosa ureteris") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "ureter mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "ureter mucosa of organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "ureter mucous membrane") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "ureter organ mucosa") AnnotationAssertion(Annotation( "FMA:15894") "ureteral mucosa") AnnotationAssertion(Annotation( "FMA:15894") "ureteric mucosa") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004980") AnnotationAssertion(rdfs:label "mucosa of ureter") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (mucosa of epiglottis) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A mucosa that is part of a epiglottis [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( "FMA:64015") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epiglottis mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epiglottis mucosa of organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epiglottis mucous membrane") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epiglottis organ mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of organ of epiglottis") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucous membrane of epiglottis") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "organ mucosa of epiglottis") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004982") AnnotationAssertion(rdfs:label "mucosa of epiglottis") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (mucosa of vagina) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A mucosa that is part of a vagina [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( "BTO:0005676") AnnotationAssertion( "FMA:19975") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of organ of vagina") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucous membrane of vagina") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "organ mucosa of vagina") AnnotationAssertion(Annotation( "FMA:19975") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "tunica mucosa vaginae") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "vagina mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "vagina mucosa of organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "vagina mucous membrane") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "vagina organ mucosa") AnnotationAssertion(Annotation( "FMA:19975") "vaginal mucosa") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004983") AnnotationAssertion(rdfs:label "mucosa of vagina") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (mucosa of seminal vesicle) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A mucosa that is part of a seminal vesicle [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( "FMA:19405") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of organ of seminal gland") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of organ of seminal vesicle") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of seminal gland") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucous membrane of seminal gland") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucous membrane of seminal vesicle") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "organ mucosa of seminal gland") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "organ mucosa of seminal vesicle") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "seminal gland mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "seminal gland mucosa of organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "seminal gland mucous membrane") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "seminal gland organ mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "seminal vesicle mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "seminal vesicle mucosa of organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "seminal vesicle mucous membrane") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "seminal vesicle organ mucosa") AnnotationAssertion(Annotation( "FMA:19405") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "tunica mucosa glandulae vesiculosae") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004984") AnnotationAssertion(rdfs:label "mucosa of seminal vesicle") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (mucosa of ejaculatory duct) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A mucosa that is part of a ejaculatory duct [Automatically generated definition].") AnnotationAssertion( "FMA:19373") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "ejaculatory duct mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "ejaculatory duct mucosa of organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "ejaculatory duct mucous membrane") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "ejaculatory duct organ mucosa") AnnotationAssertion(Annotation( "FMA:19373") "ejaculatory ductal mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of organ of ejaculatory duct") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucous membrane of ejaculatory duct") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "organ mucosa of ejaculatory duct") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004985") AnnotationAssertion(rdfs:label "mucosa of ejaculatory duct") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (mucosa of deferent duct) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A mucosa that is part of a vas deferens [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( "FMA:19240") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "deferent duct mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "deferent duct mucosa of organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "deferent duct mucous membrane") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "deferent duct organ mucosa") AnnotationAssertion(Annotation( "FMA:19240") "deferent ductal mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "ductus deferens mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "ductus deferens mucosa of organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "ductus deferens mucous membrane") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "ductus deferens organ mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of ductus deferens") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of organ of deferent duct") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of organ of ductus deferens") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of organ of sperm duct") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of organ of vas deferen") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of organ of vas deferens") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of sperm duct") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of vas deferen") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of vas deferens") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucous membrane of deferent duct") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucous membrane of ductus deferens") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucous membrane of sperm duct") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucous membrane of vas deferen") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucous membrane of vas deferens") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "organ mucosa of deferent duct") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "organ mucosa of ductus deferens") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "organ mucosa of sperm duct") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "organ mucosa of vas deferen") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "organ mucosa of vas deferens") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "sperm duct mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "sperm duct mucosa of organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "sperm duct mucous membrane") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "sperm duct organ mucosa") AnnotationAssertion(Annotation( "FMA:19240") "tunica mucosa (ductus deferens)") AnnotationAssertion(Annotation( "FMA:19240") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "tunica mucosa ductus deferentis") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "vas deferen mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "vas deferen mucosa of organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "vas deferen mucous membrane") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "vas deferen organ mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "vas deferens mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "vas deferens mucosa of organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "vas deferens mucous membrane") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "vas deferens organ mucosa") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004986") AnnotationAssertion(rdfs:label "mucosa of deferent duct") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (mucosa of laryngopharynx) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A mucosa that is part of a hypopharynx [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( "FMA:55030") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "hypopharynx mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "hypopharynx mucosa of organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "hypopharynx mucous membrane") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "hypopharynx organ mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "laryngeal pharynx mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "laryngeal pharynx mucosa of organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "laryngeal pharynx mucous membrane") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "laryngeal pharynx organ mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "laryngopharynx mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "laryngopharynx mucosa of organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "laryngopharynx mucous membrane") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "laryngopharynx organ mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of hypopharynx") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of laryngeal pharynx") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of organ of hypopharynx") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of organ of laryngeal pharynx") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of organ of laryngopharynx") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucous membrane of hypopharynx") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucous membrane of laryngeal pharynx") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucous membrane of laryngopharynx") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "organ mucosa of hypopharynx") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "organ mucosa of laryngeal pharynx") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "organ mucosa of laryngopharynx") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004987") AnnotationAssertion(rdfs:label "mucosa of laryngopharynx") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (mucosa of cystic duct) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A mucosa that is part of a cystic duct [Automatically generated definition].") AnnotationAssertion( "FMA:14690") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "cystic duct mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "cystic duct mucosa of organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "cystic duct mucous membrane") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "cystic duct organ mucosa") AnnotationAssertion(Annotation( "FMA:14690") "cystic ductal mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of organ of cystic duct") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucous membrane of cystic duct") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "organ mucosa of cystic duct") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004988") AnnotationAssertion(rdfs:label "mucosa of cystic duct") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (mucosa of appendix) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A mucosa that is part of an appendix [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( "CALOHA:TS-2022") AnnotationAssertion( "FMA:14991") AnnotationAssertion(Annotation( "FMA:14991") "appendiceal mucous membrane") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "appendix mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "appendix mucosa of organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "appendix mucous membrane") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "appendix organ mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "caecal appendix mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "caecal appendix mucosa of organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "caecal appendix mucous membrane") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "caecal appendix organ mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of caecal appendix") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of organ of appendix") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of organ of caecal appendix") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of organ of vermiform appendix") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of organ of vermix") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of vermiform appendix") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of vermix") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucous membrane of appendix") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucous membrane of caecal appendix") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucous membrane of vermiform appendix") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucous membrane of vermix") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "organ mucosa of appendix") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "organ mucosa of caecal appendix") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "organ mucosa of vermiform appendix") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "organ mucosa of vermix") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "vermiform appendix mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "vermiform appendix mucosa of organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "vermiform appendix mucous membrane") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "vermiform appendix organ mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "vermix mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "vermix mucosa of organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "vermix mucous membrane") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "vermix organ mucosa") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004989") AnnotationAssertion(rdfs:label "mucosa of appendix") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (mucosa of ascending colon) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A mucosa that is part of an ascending colon [Automatically generated definition].") AnnotationAssertion( "FMA:15005") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "ascending colon mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "ascending colon mucosa of organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "ascending colon mucous membrane") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "ascending colon organ mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of organ of ascending colon") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucous membrane of ascending colon") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "organ mucosa of ascending colon") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004990") AnnotationAssertion(rdfs:label "mucosa of ascending colon") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (mucosa of transverse colon) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A mucosa that is part of a transverse colon [Automatically generated definition].") AnnotationAssertion( "FMA:15012") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of organ of transverse colon") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucous membrane of transverse colon") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "organ mucosa of transverse colon") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "transverse colon mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "transverse colon mucosa of organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "transverse colon mucous membrane") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "transverse colon organ mucosa") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004991") AnnotationAssertion(rdfs:label "mucosa of transverse colon") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (mucosa of descending colon) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A mucosa that is part of a descending colon [Automatically generated definition].") AnnotationAssertion( "FMA:15019") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "descending colon mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "descending colon mucosa of organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "descending colon mucous membrane") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "descending colon organ mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of organ of descending colon") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucous membrane of descending colon") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "organ mucosa of descending colon") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004992") AnnotationAssertion(rdfs:label "mucosa of descending colon") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (mucosa of sigmoid colon) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A mucosa that is part of a sigmoid colon [Automatically generated definition].") AnnotationAssertion( "FMA:15026") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of organ of sigmoid colon") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucous membrane of sigmoid colon") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "organ mucosa of sigmoid colon") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "sigmoid colon mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "sigmoid colon mucosa of organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "sigmoid colon mucous membrane") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "sigmoid colon organ mucosa") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004993") AnnotationAssertion(rdfs:label "mucosa of sigmoid colon") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (mucosa of fundus of stomach) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A mucosa that is part of a fundus of stomach [Automatically generated definition].") AnnotationAssertion( "EMAPA:27151") AnnotationAssertion( "FMA:17053") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "fundus gastricus (ventricularis) mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "fundus gastricus (ventricularis) mucosa of organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "fundus gastricus (ventricularis) mucous membrane") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "fundus gastricus (ventricularis) organ mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "fundus of stomach mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "fundus of stomach mucosa of organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "fundus of stomach mucous membrane") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "fundus of stomach organ mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of fundus gastricus (ventricularis)") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of organ of fundus gastricus (ventricularis)") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of organ of fundus of stomach") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of organ of stomach fundus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of stomach fundus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucous membrane of fundus gastricus (ventricularis)") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucous membrane of fundus of stomach") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucous membrane of stomach fundus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "organ mucosa of fundus gastricus (ventricularis)") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "organ mucosa of fundus of stomach") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "organ mucosa of stomach fundus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "stomach fundus mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "stomach fundus mucosa of organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "stomach fundus mucous membrane") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "stomach fundus organ mucosa") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004994") AnnotationAssertion(rdfs:label "mucosa of fundus of stomach") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (mucosa of body of stomach) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A mucosa that is part of a body of stomach [Automatically generated definition].") AnnotationAssertion( "FMA:17054") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "body of stomach mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "body of stomach mucosa of organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "body of stomach mucous membrane") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "body of stomach organ mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "corpus gastricum (ventriculare) mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "corpus gastricum (ventriculare) mucosa of organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "corpus gastricum (ventriculare) mucous membrane") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "corpus gastricum (ventriculare) organ mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "gastric body mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "gastric body mucosa of organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "gastric body mucous membrane") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "gastric body organ mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of corpus gastricum (ventriculare)") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of gastric body") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of organ of body of stomach") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of organ of corpus gastricum (ventriculare)") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of organ of gastric body") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of organ of stomach body") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of stomach body") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucous membrane of body of stomach") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucous membrane of corpus gastricum (ventriculare)") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucous membrane of gastric body") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucous membrane of stomach body") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "organ mucosa of body of stomach") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "organ mucosa of corpus gastricum (ventriculare)") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "organ mucosa of gastric body") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "organ mucosa of stomach body") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "stomach body mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "stomach body mucosa of organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "stomach body mucous membrane") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "stomach body organ mucosa") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004995") AnnotationAssertion(rdfs:label "mucosa of body of stomach") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (mucosa of cardia of stomach) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A mucosa that is part of a cardia of stomach [Automatically generated definition].") AnnotationAssertion( "FMA:17456") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "cardia of stomach mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "cardia of stomach mucosa of organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "cardia of stomach mucous membrane") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "cardia of stomach organ mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "cardial part of stomach mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "cardial part of stomach mucosa of organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "cardial part of stomach mucous membrane") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "cardial part of stomach organ mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "gastric cardia mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "gastric cardia mucosa of organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "gastric cardia mucous membrane") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "gastric cardia organ mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of cardial part of stomach") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of gastric cardia") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of organ of cardia of stomach") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of organ of cardial part of stomach") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of organ of gastric cardia") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of organ of pars cardiaca (gaster)") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of organ of stomach cardiac region") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of pars cardiaca (gaster)") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of stomach cardiac region") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucous membrane of cardia of stomach") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucous membrane of cardial part of stomach") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucous membrane of gastric cardia") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucous membrane of pars cardiaca (gaster)") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucous membrane of stomach cardiac region") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "organ mucosa of cardia of stomach") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "organ mucosa of cardial part of stomach") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "organ mucosa of gastric cardia") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "organ mucosa of pars cardiaca (gaster)") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "organ mucosa of stomach cardiac region") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "pars cardiaca (gaster) mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "pars cardiaca (gaster) mucosa of organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "pars cardiaca (gaster) mucous membrane") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "pars cardiaca (gaster) organ mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "stomach cardiac region mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "stomach cardiac region mucosa of organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "stomach cardiac region mucous membrane") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "stomach cardiac region organ mucosa") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004996") AnnotationAssertion(rdfs:label "mucosa of cardia of stomach") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (mucosa of pyloric antrum) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A mucosa that is part of a pyloric antrum [Automatically generated definition].") AnnotationAssertion( "BTO:0004107") AnnotationAssertion( "FMA:17055") AnnotationAssertion(Annotation( "BTO:0004107") "antral mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "antrum of stomach mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "antrum of stomach mucosa of organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "antrum of stomach mucous membrane") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "antrum of stomach organ mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of antrum of stomach") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of organ of antrum of stomach") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of organ of pyloric antrum") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of organ of stomach pyloric antrum") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of stomach pyloric antrum") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucous membrane of antrum of stomach") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucous membrane of pyloric antrum") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucous membrane of stomach pyloric antrum") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "organ mucosa of antrum of stomach") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "organ mucosa of pyloric antrum") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "organ mucosa of stomach pyloric antrum") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "pyloric antrum mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "pyloric antrum mucosa of organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "pyloric antrum mucous membrane") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "pyloric antrum organ mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "stomach pyloric antrum mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "stomach pyloric antrum mucosa of organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "stomach pyloric antrum mucous membrane") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "stomach pyloric antrum organ mucosa") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0004107") "gastric antrum mucosa") AnnotationAssertion( "UBERON:0004997") AnnotationAssertion(rdfs:label "mucosa of pyloric antrum") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "BTO"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (mucosa of pylorus) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A mucosa that is part of a pylorus [Automatically generated definition].") AnnotationAssertion( "BTO:0004110") AnnotationAssertion( "EMAPA:27199") AnnotationAssertion( "FMA:17461") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of organ of pyloric part of stomach") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of organ of pylorus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of organ of stomach pyloric region") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of pyloric part of stomach") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of stomach pyloric region") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucous membrane of pyloric part of stomach") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucous membrane of pylorus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucous membrane of stomach pyloric region") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "organ mucosa of pyloric part of stomach") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "organ mucosa of pylorus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "organ mucosa of stomach pyloric region") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "pyloric part of stomach mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "pyloric part of stomach mucosa of organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "pyloric part of stomach mucous membrane") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "pyloric part of stomach organ mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "pylorus mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "pylorus mucosa of organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "pylorus mucous membrane") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "pylorus organ mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "stomach pyloric region mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "stomach pyloric region mucosa of organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "stomach pyloric region mucous membrane") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "stomach pyloric region organ mucosa") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0002984") "antropyloric mucosa") AnnotationAssertion( "UBERON:0004998") AnnotationAssertion(rdfs:label "mucosa of pylorus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (mucosa of biliary tree) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A mucosa that is part of a biliary tree [Automatically generated definition].") AnnotationAssertion( "FMA:14695") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "biliary tract mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "biliary tract mucosa of organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "biliary tract mucous membrane") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "biliary tract organ mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "biliary tree mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "biliary tree mucosa of organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "biliary tree mucous membrane") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "biliary tree organ mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of biliary tract") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of organ of biliary tract") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of organ of biliary tree") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucous membrane of biliary tract") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucous membrane of biliary tree") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "organ mucosa of biliary tract") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "organ mucosa of biliary tree") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0004999") AnnotationAssertion(rdfs:label "mucosa of biliary tree") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (mucosa of common bile duct) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A mucosa that is part of a common bile duct [Automatically generated definition].") AnnotationAssertion( "FMA:14688") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "common bile duct mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "common bile duct mucosa of organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "common bile duct mucous membrane") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "common bile duct organ mucosa") AnnotationAssertion(Annotation( "FMA:14688") "common bile ductal mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "ductus choledochus (biliaris) mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "ductus choledochus (biliaris) mucosa of organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "ductus choledochus (biliaris) mucous membrane") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "ductus choledochus (biliaris) organ mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of ductus choledochus (biliaris)") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of organ of common bile duct") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of organ of ductus choledochus (biliaris)") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucous membrane of common bile duct") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucous membrane of ductus choledochus (biliaris)") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "organ mucosa of common bile duct") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "organ mucosa of ductus choledochus (biliaris)") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005000") AnnotationAssertion(rdfs:label "mucosa of common bile duct") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (mucosa of common hepatic duct) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A mucosa that is part of a common hepatic duct [Automatically generated definition].") AnnotationAssertion( "FMA:14691") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "common hepatic duct mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "common hepatic duct mucosa of organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "common hepatic duct mucous membrane") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "common hepatic duct organ mucosa") AnnotationAssertion(Annotation( "FMA:14691") "common hepatic ductal mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "hepatic duct mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "hepatic duct mucosa of organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "hepatic duct mucous membrane") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "hepatic duct organ mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of hepatic duct") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of organ of common hepatic duct") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of organ of hepatic duct") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucous membrane of common hepatic duct") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucous membrane of hepatic duct") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "organ mucosa of common hepatic duct") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "organ mucosa of hepatic duct") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005001") AnnotationAssertion(rdfs:label "mucosa of common hepatic duct") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (mucosa of right hepatic duct) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A mucosa that is part of a right hepatic duct [Automatically generated definition].") AnnotationAssertion( "FMA:14692") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of organ of right hepatic duct") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucous membrane of right hepatic duct") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "organ mucosa of right hepatic duct") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "right hepatic duct mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "right hepatic duct mucosa of organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "right hepatic duct mucous membrane") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "right hepatic duct organ mucosa") AnnotationAssertion(Annotation( "FMA:14692") "right hepatic ductal mucosa") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005002") AnnotationAssertion(rdfs:label "mucosa of right hepatic duct") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (mucosa of left hepatic duct) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A mucosa that is part of a left hepatic duct [Automatically generated definition].") AnnotationAssertion( "FMA:14693") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "left hepatic duct mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "left hepatic duct mucosa of organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "left hepatic duct mucous membrane") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "left hepatic duct organ mucosa") AnnotationAssertion(Annotation( "FMA:14693") "left hepatic ductal mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of organ of left hepatic duct") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucous membrane of left hepatic duct") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "organ mucosa of left hepatic duct") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005003") AnnotationAssertion(rdfs:label "mucosa of left hepatic duct") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (mucosa of right ureter) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A mucosa that is part of a right ureter [Automatically generated definition].") AnnotationAssertion( "FMA:17806") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of organ of right ureter") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucous membrane of right ureter") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "organ mucosa of right ureter") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "right ureter mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "right ureter mucosa of organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "right ureter mucous membrane") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "right ureter organ mucosa") AnnotationAssertion(Annotation( "FMA:17806") "right ureteral mucosa") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005004") AnnotationAssertion(rdfs:label "mucosa of right ureter") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (mucosa of left ureter) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A mucosa that is part of a left ureter [Automatically generated definition].") AnnotationAssertion( "FMA:17807") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "left ureter mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "left ureter mucosa of organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "left ureter mucous membrane") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "left ureter organ mucosa") AnnotationAssertion(Annotation( "FMA:17807") "left ureteral mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of organ of left ureter") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucous membrane of left ureter") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "organ mucosa of left ureter") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005005") AnnotationAssertion(rdfs:label "mucosa of left ureter") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (mucosa of renal pelvis) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A mucosa that is part of a renal pelvis [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( "FMA:17931") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "kidney pelvis mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "kidney pelvis mucosa of organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "kidney pelvis mucous membrane") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "kidney pelvis organ mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of kidney pelvis") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of organ of kidney pelvis") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of organ of pelvis of ureter") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of organ of renal pelvis") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of pelvis of ureter") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucous membrane of kidney pelvis") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucous membrane of pelvis of ureter") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucous membrane of renal pelvis") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "organ mucosa of kidney pelvis") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "organ mucosa of pelvis of ureter") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "organ mucosa of renal pelvis") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "pelvis of ureter mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "pelvis of ureter mucosa of organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "pelvis of ureter mucous membrane") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "pelvis of ureter organ mucosa") AnnotationAssertion(Annotation( "FMA:17931") "renal pelvic mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "renal pelvis mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "renal pelvis mucosa of organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "renal pelvis mucous membrane") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "renal pelvis organ mucosa") AnnotationAssertion(Annotation( "FMA:17931") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "tunica mucosa pelvis renalis") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005006") AnnotationAssertion(rdfs:label "mucosa of renal pelvis") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (mucosa of major calyx) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A mucosa that is part of a major calyx [Automatically generated definition].") AnnotationAssertion( "FMA:17934") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "major calix mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "major calix mucosa of organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "major calix mucous membrane") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "major calix organ mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "major calyx mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "major calyx mucosa of organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "major calyx mucous membrane") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "major calyx organ mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of major calix") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of organ of major calix") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of organ of major calyx") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucous membrane of major calix") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucous membrane of major calyx") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "organ mucosa of major calix") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "organ mucosa of major calyx") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005007") AnnotationAssertion(rdfs:label "mucosa of major calyx") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (mucosa of minor calyx) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A mucosa that is part of a minor calyx [Automatically generated definition].") AnnotationAssertion( "FMA:17937") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "minor calix mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "minor calix mucosa of organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "minor calix mucous membrane") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "minor calix organ mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "minor calyx mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "minor calyx mucosa of organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "minor calyx mucous membrane") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "minor calyx organ mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of minor calix") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of organ of minor calix") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of organ of minor calyx") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucous membrane of minor calix") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucous membrane of minor calyx") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "organ mucosa of minor calix") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "organ mucosa of minor calyx") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005008") AnnotationAssertion(rdfs:label "mucosa of minor calyx") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (mucosa of trigone of urinary bladder) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A mucosa that is part of a trigone of urinary bladder [Automatically generated definition].") AnnotationAssertion( "FMA:17847") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "Lieutaud ' s trigone mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "Lieutaud ' s trigone mucosa of organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "Lieutaud ' s trigone mucous membrane") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "Lieutaud ' s trigone organ mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "deep trigone mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "deep trigone mucosa of organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "deep trigone mucous membrane") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "deep trigone organ mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of Lieutaud ' s trigone") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of deep trigone") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of organ of Lieutaud ' s trigone") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of organ of deep trigone") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of organ of trigone of bladder") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of organ of trigone of urinary bladder") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of organ of urinary bladder trigone") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of organ of vesical trigone") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of trigone of bladder") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of urinary bladder trigone") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of vesical trigone") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucous membrane of Lieutaud ' s trigone") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucous membrane of deep trigone") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucous membrane of trigone of bladder") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucous membrane of trigone of urinary bladder") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucous membrane of urinary bladder trigone") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucous membrane of vesical trigone") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "organ mucosa of Lieutaud ' s trigone") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "organ mucosa of deep trigone") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "organ mucosa of trigone of bladder") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "organ mucosa of trigone of urinary bladder") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "organ mucosa of urinary bladder trigone") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "organ mucosa of vesical trigone") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "trigone of bladder mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "trigone of bladder mucosa of organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "trigone of bladder mucous membrane") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "trigone of bladder organ mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "trigone of urinary bladder mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "trigone of urinary bladder mucosa of organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "trigone of urinary bladder mucous membrane") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "trigone of urinary bladder organ mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "urinary bladder trigone mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "urinary bladder trigone mucosa of organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "urinary bladder trigone mucous membrane") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "urinary bladder trigone organ mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "vesical trigone mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "vesical trigone mucosa of organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "vesical trigone mucous membrane") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "vesical trigone organ mucosa") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005009") AnnotationAssertion(rdfs:label "mucosa of trigone of urinary bladder") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (mucosa of neck of urinary bladder) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A mucosa that is part of a neck of urinary bladder [Automatically generated definition].") AnnotationAssertion( "FMA:17846") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bladder neck mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bladder neck mucosa of organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bladder neck mucous membrane") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bladder neck organ mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of bladder neck") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of neck of bladder") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of organ of bladder neck") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of organ of neck of bladder") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of organ of neck of urinary bladder") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of organ of urinary bladder neck") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of organ of vesical neck") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of urinary bladder neck") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of vesical neck") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucous membrane of bladder neck") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucous membrane of neck of bladder") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucous membrane of neck of urinary bladder") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucous membrane of urinary bladder neck") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucous membrane of vesical neck") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "neck of bladder mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "neck of bladder mucosa of organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "neck of bladder mucous membrane") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "neck of bladder organ mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "neck of urinary bladder mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "neck of urinary bladder mucosa of organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "neck of urinary bladder mucous membrane") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "neck of urinary bladder organ mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "organ mucosa of bladder neck") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "organ mucosa of neck of bladder") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "organ mucosa of neck of urinary bladder") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "organ mucosa of urinary bladder neck") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "organ mucosa of vesical neck") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "urinary bladder neck mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "urinary bladder neck mucosa of organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "urinary bladder neck mucous membrane") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "vesical neck mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "vesical neck mucosa of organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "vesical neck mucous membrane") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "vesical neck organ mucosa") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005010") AnnotationAssertion(rdfs:label "mucosa of neck of urinary bladder") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (mucosa of right uterine tube) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A mucosa that is part of a right uterine tube [Automatically generated definition].") AnnotationAssertion( "FMA:18452") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of organ of right fallopian tube") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of organ of right oviduct") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of organ of right uterine tube") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of right fallopian tube") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of right oviduct") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucous membrane of right fallopian tube") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucous membrane of right oviduct") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucous membrane of right uterine tube") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "organ mucosa of right fallopian tube") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "organ mucosa of right oviduct") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "organ mucosa of right uterine tube") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "right fallopian tube mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "right fallopian tube mucosa of organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "right fallopian tube mucous membrane") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "right fallopian tube organ mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "right oviduct mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "right oviduct mucosa of organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "right oviduct mucous membrane") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "right oviduct organ mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "right uterine tube mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "right uterine tube mucosa of organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "right uterine tube mucous membrane") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "right uterine tube organ mucosa") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005011") AnnotationAssertion(rdfs:label "mucosa of right uterine tube") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (mucosa of left uterine tube) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A mucosa that is part of a left uterine tube [Automatically generated definition].") AnnotationAssertion( "FMA:18453") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "left fallopian tube mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "left fallopian tube mucosa of organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "left fallopian tube mucous membrane") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "left fallopian tube organ mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "left oviduct mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "left oviduct mucosa of organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "left oviduct mucous membrane") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "left oviduct organ mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "left uterine tube mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "left uterine tube mucosa of organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "left uterine tube mucous membrane") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "left uterine tube organ mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of left fallopian tube") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of left oviduct") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of organ of left fallopian tube") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of organ of left oviduct") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of organ of left uterine tube") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucous membrane of left fallopian tube") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucous membrane of left oviduct") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucous membrane of left uterine tube") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "organ mucosa of left fallopian tube") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "organ mucosa of left oviduct") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "organ mucosa of left uterine tube") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005012") AnnotationAssertion(rdfs:label "mucosa of left uterine tube") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (mucosa of male urethra) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A mucosa that is part of a male urethra [Automatically generated definition].") AnnotationAssertion( "FMA:239937") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "male urethra mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "male urethra mucosa of organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "male urethra mucous membrane") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "male urethra organ mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of organ of male urethra") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucous membrane of male urethra") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "organ mucosa of male urethra") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005013") AnnotationAssertion(rdfs:label "mucosa of male urethra") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (mucosa of female urethra) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A mucosa that is part of a female urethra [Automatically generated definition].") AnnotationAssertion( "FMA:239940") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "female urethra mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "female urethra mucosa of organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "female urethra mucous membrane") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "female urethra organ mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of organ of female urethra") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucous membrane of female urethra") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "organ mucosa of female urethra") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005014") AnnotationAssertion(rdfs:label "mucosa of female urethra") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (mucosa of prostatic urethra) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A mucosa that is part of a prostatic urethra [Automatically generated definition].") AnnotationAssertion( "FMA:77079") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of organ of prostatic part of urethra") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of organ of prostatic urethra") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of prostatic part of urethra") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucous membrane of prostatic part of urethra") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucous membrane of prostatic urethra") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "organ mucosa of prostatic part of urethra") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "organ mucosa of prostatic urethra") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "prostatic part of urethra mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "prostatic part of urethra mucosa of organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "prostatic part of urethra mucous membrane") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "prostatic part of urethra organ mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "prostatic urethra mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "prostatic urethra mucosa of organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "prostatic urethra mucous membrane") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "prostatic urethra organ mucosa") AnnotationAssertion(Annotation( "FMA:77079") "prostatic urethral mucosa") AnnotationAssertion(Annotation( "FMA:77079") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "tunica mucosa urethrae prosticae") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005015") AnnotationAssertion(rdfs:label "mucosa of prostatic urethra") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (mucosa of intermediate urethra) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A mucosa that is part of a membranous urethra [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( "FMA:77085") AnnotationAssertion( "galen:MucousMembraneOfUrethra") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "intermediate part of urethra mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "intermediate part of urethra mucosa of organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "intermediate part of urethra mucous membrane") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "intermediate part of urethra organ mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "intermediate urethra mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "intermediate urethra mucosa of organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "intermediate urethra mucous membrane") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "intermediate urethra organ mucosa") AnnotationAssertion(Annotation( "FMA:77085") "intermediate urethral mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "membranous part of urethra mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "membranous part of urethra mucosa of organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "membranous part of urethra mucous membrane") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "membranous part of urethra organ mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "membranous urethra mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "membranous urethra mucosa of organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "membranous urethra mucous membrane") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "membranous urethra organ mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of intermediate part of urethra") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of membranous part of urethra") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of membranous urethra") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of organ of intermediate part of urethra") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of organ of intermediate urethra") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of organ of membranous part of urethra") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of organ of membranous urethra") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of organ of pars membranacea (urethrae)") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of pars membranacea (urethrae)") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucous membrane of intermediate part of urethra") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucous membrane of intermediate urethra") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucous membrane of membranous part of urethra") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucous membrane of membranous urethra") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucous membrane of pars membranacea (urethrae)") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "organ mucosa of intermediate part of urethra") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "organ mucosa of intermediate urethra") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "organ mucosa of membranous part of urethra") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "organ mucosa of membranous urethra") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "organ mucosa of pars membranacea (urethrae)") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "pars membranacea (urethrae) mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "pars membranacea (urethrae) mucosa of organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "pars membranacea (urethrae) mucous membrane") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "pars membranacea (urethrae) organ mucosa") AnnotationAssertion(Annotation( "FMA:77085") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "tunica mucosa urethrae intermediae") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005016") AnnotationAssertion(rdfs:label "mucosa of intermediate urethra") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (mucosa of lacrimal sac) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A mucosa that is part of a lacrimal sac [Automatically generated definition].") AnnotationAssertion( "FMA:72061") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "lacrimal sac mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "lacrimal sac mucosa of organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "lacrimal sac mucous membrane") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "lacrimal sac organ mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of organ of lacrimal sac") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucous membrane of lacrimal sac") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "organ mucosa of lacrimal sac") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005017") AnnotationAssertion(rdfs:label "mucosa of lacrimal sac") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (mucosa of nasal septum) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A mucosa that is part of a nasal septum [Automatically generated definition].") AnnotationAssertion( "EMAPA:36028") AnnotationAssertion( "FMA:60113") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of organ of nasal septum") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucous membrane of nasal septum") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "nasal septum mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "nasal septum mucosa of organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "nasal septum mucous membrane") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "nasal septum organ mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "organ mucosa of nasal septum") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005018") AnnotationAssertion(rdfs:label "mucosa of nasal septum") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (mucosa of palate) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A mucosa that is part of a palate [Automatically generated definition].") AnnotationAssertion( "FMA:59765") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of oral roof") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of organ of oral roof") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of organ of palate") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of organ of roof of mouth") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of roof of mouth") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucous membrane of oral roof") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucous membrane of palate") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucous membrane of roof of mouth") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "oral roof mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "oral roof mucosa of organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "oral roof mucous membrane") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "oral roof organ mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "organ mucosa of oral roof") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "organ mucosa of palate") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "organ mucosa of roof of mouth") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "palate mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "palate mucosa of organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "palate mucous membrane") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "palate organ mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "roof of mouth mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "roof of mouth mucosa of organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "roof of mouth mucous membrane") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "roof of mouth organ mucosa") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005019") AnnotationAssertion(rdfs:label "mucosa of palate") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (mucosa of tongue) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A mucosa that is part of a tongue [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( "EFO:0002553") AnnotationAssertion( "FMA:54807") AnnotationAssertion(Annotation( "FMA:54807") "lingual mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of organ of tongue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucous membrane of tongue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "organ mucosa of tongue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "tongue mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "tongue mucosa of organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "tongue mucous membrane") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "tongue organ mucosa") AnnotationAssertion(Annotation( "FMA:54807") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "tunica mucosa linguae") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005020") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "mucosa of tongue") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (mucosa of sphenoidal sinus) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A mucosa that is part of a sphenoidal sinus [Automatically generated definition].") AnnotationAssertion( "decide whether cavities can be part of mucosae") AnnotationAssertion( ) AnnotationAssertion( "FMA:59775") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of organ of sphenoid sinus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of organ of sphenoidal sinus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of sphenoid sinus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucous membrane of sphenoid sinus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucous membrane of sphenoidal sinus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "organ mucosa of sphenoid sinus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "organ mucosa of sphenoidal sinus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "sphenoid sinus mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "sphenoid sinus mucosa of organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "sphenoid sinus mucous membrane") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "sphenoid sinus organ mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "sphenoidal sinus mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "sphenoidal sinus mucosa of organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "sphenoidal sinus mucous membrane") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "sphenoidal sinus organ mucosa") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005021") AnnotationAssertion(rdfs:label "mucosa of sphenoidal sinus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (mucosa of nasopharynx) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A mucosa that is part of a nasopharynx [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( "FMA:54971") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of nasal part of pharynx") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of organ of nasal part of pharynx") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of organ of nasopharynx") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of organ of rhinopharynx") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of rhinopharynx") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucous membrane of nasal part of pharynx") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucous membrane of nasopharynx") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucous membrane of rhinopharynx") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "nasal part of pharynx mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "nasal part of pharynx mucosa of organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "nasal part of pharynx mucous membrane") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "nasal part of pharynx organ mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "nasopharynx mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "nasopharynx mucosa of organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "nasopharynx mucous membrane") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "nasopharynx organ mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "organ mucosa of nasal part of pharynx") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "organ mucosa of nasopharynx") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "organ mucosa of rhinopharynx") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "rhinopharynx mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "rhinopharynx mucosa of organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "rhinopharynx mucous membrane") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "rhinopharynx organ mucosa") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005022") AnnotationAssertion(rdfs:label "mucosa of nasopharynx") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (mucosa of oropharynx) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A mucosa that is part of a oropharynx [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( "FMA:54933") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of oral part of pharynx") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of organ of oral part of pharynx") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of organ of oropharynx") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucous membrane of oral part of pharynx") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucous membrane of oropharynx") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "oral part of pharynx mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "oral part of pharynx mucosa of organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "oral part of pharynx mucous membrane") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "oral part of pharynx organ mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "organ mucosa of oral part of pharynx") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "organ mucosa of oropharynx") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "oropharynx mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "oropharynx mucosa of organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "oropharynx mucous membrane") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "oropharynx organ mucosa") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005023") AnnotationAssertion(rdfs:label "mucosa of oropharynx") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (mucosa of soft palate) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A mucosa that is part of a soft palate [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:59784") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of organ of soft palate") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucous membrane of soft palate") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "organ mucosa of soft palate") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "soft palate mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "soft palate mucosa of organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "soft palate mucous membrane") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "soft palate organ mucosa") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005024") AnnotationAssertion(rdfs:label "mucosa of soft palate") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (mucosa of uvula) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A mucosa that is part of a uvula [Automatically generated definition].") AnnotationAssertion( "FMA:60030") AnnotationAssertion(Annotation( "FMA:60030") "uvula mucosa") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005025") AnnotationAssertion(rdfs:label "mucosa of uvula") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (mucosa of middle ear) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A mucosa that is part of a middle ear [Automatically generated definition].") AnnotationAssertion( "CALOHA:TS-0631") AnnotationAssertion( "FMA:59663") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "middle ear mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "middle ear mucosa of organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "middle ear mucous membrane") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "middle ear organ mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of organ of middle ear") AnnotationAssertion(Annotation( "FMA:59663") "mucosa of tympanic cavity") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucous membrane of middle ear") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "organ mucosa of middle ear") AnnotationAssertion(Annotation( "FMA:59663") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "tunica mucosa cavitatis tympanicae") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005026") AnnotationAssertion(rdfs:label "mucosa of middle ear") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (mucosa of frontal sinus) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A mucosa that is part of a frontal sinus [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( "FMA:59774") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "frontal sinus mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "frontal sinus mucosa of organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "frontal sinus mucous membrane") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "frontal sinus organ mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of organ of frontal sinus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucous membrane of frontal sinus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "organ mucosa of frontal sinus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005027") AnnotationAssertion(rdfs:label "mucosa of frontal sinus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (mucosa of maxillary sinus) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A mucosa that is part of a maxillary sinus [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( "FMA:59773") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "antrum of highmore mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "antrum of highmore mucosa of organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "antrum of highmore mucous membrane") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "antrum of highmore organ mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "maxillary sinus mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "maxillary sinus mucosa of organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "maxillary sinus mucous membrane") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "maxillary sinus organ mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of antrum of highmore") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of organ of antrum of highmore") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of organ of maxillary sinus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucous membrane of antrum of highmore") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucous membrane of maxillary sinus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "organ mucosa of antrum of highmore") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "organ mucosa of maxillary sinus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005028") AnnotationAssertion(rdfs:label "mucosa of maxillary sinus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (mucosa of lacrimal canaliculus) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A mucosa that is part of a lacrimal canaliculus [Automatically generated definition].") AnnotationAssertion( "FMA:85366") AnnotationAssertion(Annotation( "FMA:85366") "lacrimal canalicular mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "lacrimal canaliculus mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "lacrimal canaliculus mucosa of organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "lacrimal canaliculus mucous membrane") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "lacrimal canaliculus organ mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of organ of lacrimal canaliculus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucous membrane of lacrimal canaliculus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "organ mucosa of lacrimal canaliculus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005029") AnnotationAssertion(rdfs:label "mucosa of lacrimal canaliculus") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (mucosa of paranasal sinus) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A mucosa that adjacent_to a paranasal sinus.") AnnotationAssertion( "FMA:59772") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "paranasal sinus mucosa") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005030") AnnotationAssertion(rdfs:label "mucosa of paranasal sinus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (mucosa of upper lip) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A mucosa that is part of a upper lip [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:59832") AnnotationAssertion( "NCIT:C12224") AnnotationAssertion(Annotation( "ncithesaurus:Mucosa_of_the_Upper_Lip") "UMLS:C0226933") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of organ of upper lip") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucous membrane of upper lip") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "organ mucosa of upper lip") AnnotationAssertion(Annotation( "UBERON:cjm"^^xsd:string) "upper labial mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "upper lip mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "upper lip mucosa of organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "upper lip mucous membrane") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "upper lip organ mucosa") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005031") AnnotationAssertion(rdfs:label "mucosa of upper lip") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (mucosa of lower lip) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A mucosa that is part of a lower lip [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:59833") AnnotationAssertion( "NCIT:C12225") AnnotationAssertion(Annotation( "ncithesaurus:Mucosa_of_the_Lower_Lip") "UMLS:C0226939") AnnotationAssertion(Annotation( "UBERON:cjm"^^xsd:string) "lower labial mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "lower lip mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "lower lip mucosa of organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "lower lip mucous membrane") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "lower lip organ mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of organ of lower lip") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucous membrane of lower lip") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "organ mucosa of lower lip") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005032") AnnotationAssertion(rdfs:label "mucosa of lower lip") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (mucosa of gallbladder) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A mucosa that is part of a gallbladder [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( "FMA:14662") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "gall bladder mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "gall bladder mucosa of organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "gall bladder mucous membrane") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "gall bladder organ mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "gallbladder mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "gallbladder mucosa of organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "gallbladder mucous membrane") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "gallbladder organ mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of gall bladder") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of organ of gall bladder") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of organ of gallbladder") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucous membrane of gall bladder") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucous membrane of gallbladder") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "organ mucosa of gall bladder") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "organ mucosa of gallbladder") AnnotationAssertion(Annotation( "FMA:14662") "tunica mucosa (vesica biliaris)") AnnotationAssertion(Annotation( "FMA:14662") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "tunica mucosa vesicae biliaris") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005033") AnnotationAssertion(rdfs:label "mucosa of gallbladder") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (mucosa of right main bronchus) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A mucosa that is part of a right main bronchus [Automatically generated definition].") AnnotationAssertion( "FMA:13137") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of organ of right bronchus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of organ of right main bronchus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of organ of right principal bronchus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of right bronchus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of right principal bronchus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucous membrane of right bronchus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucous membrane of right main bronchus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucous membrane of right principal bronchus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "organ mucosa of right bronchus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "organ mucosa of right main bronchus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "organ mucosa of right principal bronchus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "right bronchus mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "right bronchus mucosa of organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "right bronchus mucous membrane") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "right bronchus organ mucosa") AnnotationAssertion(Annotation( "FMA:13137") "right main bronchial mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "right main bronchus mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "right main bronchus mucosa of organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "right main bronchus mucous membrane") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "right main bronchus organ mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "right principal bronchus mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "right principal bronchus mucosa of organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "right principal bronchus mucous membrane") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "right principal bronchus organ mucosa") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005034") AnnotationAssertion(rdfs:label "mucosa of right main bronchus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (mucosa of left main bronchus) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A mucosa that is part of a left main bronchus [Automatically generated definition].") AnnotationAssertion( "FMA:13138") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "left bronchus mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "left bronchus mucosa of organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "left bronchus mucous membrane") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "left bronchus organ mucosa") AnnotationAssertion(Annotation( "FMA:13138") "left main bronchial mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "left main bronchus mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "left main bronchus mucosa of organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "left main bronchus mucous membrane") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "left main bronchus organ mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "left principal bronchus mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "left principal bronchus mucosa of organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "left principal bronchus mucous membrane") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "left principal bronchus organ mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of left bronchus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of left principal bronchus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of organ of left bronchus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of organ of left main bronchus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of organ of left principal bronchus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucous membrane of left bronchus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucous membrane of left main bronchus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucous membrane of left principal bronchus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "organ mucosa of left bronchus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "organ mucosa of left main bronchus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "organ mucosa of left principal bronchus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005035") AnnotationAssertion(rdfs:label "mucosa of left main bronchus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (mucosa of main bronchus) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A mucosa that is part of a main bronchus [Automatically generated definition].") AnnotationAssertion( "FMA:13115") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bronchus principalis mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bronchus principalis mucosa of organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bronchus principalis mucous membrane") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bronchus principalis organ mucosa") AnnotationAssertion(Annotation( "FMA:13115") "main bronchial mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "main bronchus mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "main bronchus mucosa of organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "main bronchus mucous membrane") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "main bronchus organ mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of bronchus principalis") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of organ of bronchus principalis") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of organ of main bronchus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of organ of primary bronchus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of organ of principal bronchus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of primary bronchus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of principal bronchus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucous membrane of bronchus principalis") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucous membrane of main bronchus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucous membrane of primary bronchus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucous membrane of principal bronchus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "organ mucosa of bronchus principalis") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "organ mucosa of main bronchus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "organ mucosa of primary bronchus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "organ mucosa of principal bronchus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "primary bronchus mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "primary bronchus mucosa of organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "primary bronchus mucous membrane") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "primary bronchus organ mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "principal bronchus mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "principal bronchus mucosa of organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "principal bronchus mucous membrane") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "principal bronchus organ mucosa") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005036") AnnotationAssertion(rdfs:label "mucosa of main bronchus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (mucosa of lobar bronchus) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A mucosa that is part of a lobar bronchus [Automatically generated definition].") AnnotationAssertion( "FMA:62668") AnnotationAssertion(Annotation( "FMA:62668") "lobar bronchial mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "lobar bronchus mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "lobar bronchus mucosa of organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "lobar bronchus mucous membrane") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "lobar bronchus organ mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of organ of lobar bronchus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of organ of secondary bronchus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of secondary bronchus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucous membrane of lobar bronchus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucous membrane of secondary bronchus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "organ mucosa of lobar bronchus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "organ mucosa of secondary bronchus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "secondary bronchus mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "secondary bronchus mucosa of organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "secondary bronchus mucous membrane") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "secondary bronchus organ mucosa") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005037") AnnotationAssertion(rdfs:label "mucosa of lobar bronchus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (mucosa of segmental bronchus) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A mucosa that is part of a segmental bronchus [Automatically generated definition].") AnnotationAssertion( "FMA:62666") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of organ of segmental bronchus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of organ of tertiary bronchus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of tertiary bronchus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucous membrane of segmental bronchus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucous membrane of tertiary bronchus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "organ mucosa of segmental bronchus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "organ mucosa of tertiary bronchus") AnnotationAssertion(Annotation( "FMA:62666") "segmental bronchial mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "segmental bronchus mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "segmental bronchus mucosa of organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "segmental bronchus mucous membrane") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "segmental bronchus organ mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "tertiary bronchus mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "tertiary bronchus mucosa of organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "tertiary bronchus mucous membrane") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "tertiary bronchus organ mucosa") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005038") AnnotationAssertion(rdfs:label "mucosa of segmental bronchus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (mucosa of bronchiole) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A mucosa that is part of a bronchiole [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( "FMA:263230") AnnotationAssertion( "FMA:62774") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bronchiole mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bronchiole mucosa of organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bronchiole mucous membrane") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bronchiole organ mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "lobular bronchiole mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "lobular bronchiole mucosa of organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "lobular bronchiole mucous membrane") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "lobular bronchiole organ mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of lobular bronchiole") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of organ of bronchiole") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of organ of lobular bronchiole") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucous membrane of bronchiole") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucous membrane of lobular bronchiole") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "organ mucosa of bronchiole") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "organ mucosa of lobular bronchiole") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005039") AnnotationAssertion(rdfs:label "mucosa of bronchiole") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (mucosa of terminal bronchiole) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A mucosa that is part of a terminal bronchiole [Automatically generated definition].") AnnotationAssertion( "FMA:263232") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bronchiolus terminalis mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bronchiolus terminalis mucosa of organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bronchiolus terminalis mucous membrane") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bronchiolus terminalis organ mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of bronchiolus terminalis") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of organ of bronchiolus terminalis") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of organ of terminal bronchiole") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucous membrane of bronchiolus terminalis") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucous membrane of terminal bronchiole") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "organ mucosa of bronchiolus terminalis") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "organ mucosa of terminal bronchiole") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "terminal bronchiole mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "terminal bronchiole mucosa of organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "terminal bronchiole mucous membrane") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "terminal bronchiole organ mucosa") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005040") AnnotationAssertion(rdfs:label "mucosa of terminal bronchiole") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (mucosa of respiratory bronchiole) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A mucosa that is part of a respiratory bronchiole [Automatically generated definition].") AnnotationAssertion( "FMA:263238") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bronchiolus respiratorius mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bronchiolus respiratorius mucosa of organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bronchiolus respiratorius mucous membrane") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "bronchiolus respiratorius organ mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of bronchiolus respiratorius") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of organ of bronchiolus respiratorius") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of organ of respiratory bronchiole") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucous membrane of bronchiolus respiratorius") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucous membrane of respiratory bronchiole") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "organ mucosa of bronchiolus respiratorius") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "organ mucosa of respiratory bronchiole") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "respiratory bronchiole mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "respiratory bronchiole mucosa of organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "respiratory bronchiole mucous membrane") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "respiratory bronchiole organ mucosa") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005041") AnnotationAssertion(rdfs:label "mucosa of respiratory bronchiole") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (inner epithelial layer of tympanic membrane) AnnotationAssertion(Annotation( ) Annotation( ) "A portion of the tympanic cavity epithelium which makes up the outer (cuticular) layer of the tympanic membrane.") AnnotationAssertion(Annotation( "FMA"^^xsd:string) "in FMA this is classified as a mucosa") AnnotationAssertion( ) AnnotationAssertion( "FMA:56844") AnnotationAssertion(Annotation( "FMA:56844") "mucosa of tympanic membrane") AnnotationAssertion(Annotation( "FMA:56844") "mucous layer of tympanic membrane") AnnotationAssertion(Annotation( "FMA:56844") "mucous stratum of tympanic membrane") AnnotationAssertion(Annotation( ) "tympanic membrane external middle ear cavity epithelial component") AnnotationAssertion(Annotation( "FMA:56844") "tympanic membrane mucosa") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005042") AnnotationAssertion(rdfs:label "inner epithelial layer of tympanic membrane") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (mucosa of nasolacrimal duct) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A mucosa that is part of a nasolacrimal duct [Automatically generated definition].") AnnotationAssertion( "FMA:59664") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of organ of nasolacrimal duct") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucous membrane of nasolacrimal duct") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "nasolacrimal duct mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "nasolacrimal duct mucosa of organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "nasolacrimal duct mucous membrane") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "nasolacrimal duct organ mucosa") AnnotationAssertion(Annotation( "FMA:59664") "nasolacrimal ductal mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "organ mucosa of nasolacrimal duct") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005043") AnnotationAssertion(rdfs:label "mucosa of nasolacrimal duct") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (mucosa of pharyngotympanic tube) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A mucosa that is part of a pharyngotympanic tube [Automatically generated definition].") AnnotationAssertion( "FMA:60109") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "auditory tube mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "auditory tube mucosa of organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "auditory tube mucous membrane") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "auditory tube organ mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "internal auditory tube mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "internal auditory tube mucosa of organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "internal auditory tube mucous membrane") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "internal auditory tube organ mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of auditory tube") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of internal auditory tube") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of organ of auditory tube") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of organ of internal auditory tube") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of organ of pharyngotympanic tube") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucous membrane of auditory tube") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucous membrane of internal auditory tube") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucous membrane of pharyngotympanic tube") AnnotationAssertion(Annotation( "FMA:60109") "mucuous membrane of eustachian tube") AnnotationAssertion(Annotation( "FMA:60109") "mucuous membrane of pharyngotympanic tube") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "organ mucosa of auditory tube") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "organ mucosa of internal auditory tube") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "organ mucosa of pharyngotympanic tube") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "pharyngotympanic tube mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "pharyngotympanic tube mucosa of organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "pharyngotympanic tube mucous membrane") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "pharyngotympanic tube organ mucosa") AnnotationAssertion(Annotation( "FMA:60109") "tunica mucosa (tuba auditiva)") AnnotationAssertion(Annotation( "FMA:60109") "tunica mucosa (tuba auditoria)") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005044") AnnotationAssertion(rdfs:label "mucosa of pharyngotympanic tube") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (mucosa of ethmoidal sinus) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A mucosa that is part of a ethmoid sinus [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( "FMA:59776") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "ethmoid sinus mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "ethmoid sinus mucosa of organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "ethmoid sinus mucous membrane") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "ethmoid sinus organ mucosa") AnnotationAssertion(Annotation( "FMA:59776") "ethmoidal sinus mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of ethmoid sinus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of organ of ethmoid sinus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucous membrane of ethmoid sinus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "organ mucosa of ethmoid sinus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005045") AnnotationAssertion(rdfs:label "mucosa of ethmoidal sinus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (mucosa of hard palate) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A mucosa that is part of a hard palate [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( "FMA:59783") AnnotationAssertion(Annotation( "OBOL:accepted"^^xsd:string) "hard palate mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "hard palate mucous membrane") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucous membrane of hard palate") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "organ mucosa of hard palate") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005046") AnnotationAssertion(rdfs:label "mucosa of hard palate") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (mucosa of vocal fold) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A mucosa that is part of a vocal cord [Automatically generated definition].") AnnotationAssertion( "FMA:64017") AnnotationAssertion(Annotation( "FMA:64017") "mucosa of glottis") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of organ of true vocal cord") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of organ of vocal cord") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of true vocal cord") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of vocal cord") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucous membrane of true vocal cord") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucous membrane of vocal cord") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "organ mucosa of true vocal cord") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "organ mucosa of vocal cord") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "true vocal cord mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "true vocal cord mucosa of organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "true vocal cord mucous membrane") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "true vocal cord organ mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "vocal cord mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "vocal cord mucosa of organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "vocal cord mucous membrane") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "vocal cord organ mucosa") AnnotationAssertion(Annotation( "FMA:64017") "vocal fold mucosa") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005047") AnnotationAssertion(rdfs:label "mucosa of vocal fold") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (mucosa of uterine tube) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A mucosa that is part of a fallopian tube [Automatically generated definition].") AnnotationAssertion( "FMA:18319") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "fallopian tube mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "fallopian tube mucosa of organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "fallopian tube mucous membrane") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "fallopian tube organ mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of fallopian tube") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of organ of fallopian tube") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of organ of uterine tube") AnnotationAssertion(Annotation( "FMA:18319") "mucosa of oviduct") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucous membrane of fallopian tube") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucous membrane of uterine tube") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "organ mucosa of fallopian tube") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "organ mucosa of uterine tube") AnnotationAssertion(Annotation( "FMA:18319") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "tunica mucosa tubae uterinae") AnnotationAssertion(Annotation( "FMA:18319") "uterine tubal mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "uterine tube mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "uterine tube mucosa of organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "uterine tube mucous membrane") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "uterine tube organ mucosa") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005048") AnnotationAssertion(rdfs:label "mucosa of uterine tube") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (mucosa of infundibulum of uterine tube) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A mucosa that is part of a uterine tube infundibulum [Automatically generated definition].") AnnotationAssertion( "FMA:18357") AnnotationAssertion(Annotation( "FMA:18357") "mucosa of infundibulum of fallopian tube") AnnotationAssertion(Annotation( "FMA:18357") "mucosa of infundibulum of oviduct") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of organ of uterine tube infundibulum") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucosa of uterine tube infundibulum") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "mucous membrane of uterine tube infundibulum") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "organ mucosa of uterine tube infundibulum") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "uterine tube infundibulum mucosa") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "uterine tube infundibulum mucosa of organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "uterine tube infundibulum mucous membrane") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "uterine tube infundibulum organ mucosa") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005049") AnnotationAssertion(rdfs:label "mucosa of infundibulum of uterine tube") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (liver papillary process) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37646") AnnotationAssertion( "FMA:14506") AnnotationAssertion( "MA:0001643") AnnotationAssertion(Annotation( "FMA:14506") "processus papillaris") AnnotationAssertion(Annotation( "FMA:14506") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "processus papillaris lobi caudati hepatis") AnnotationAssertion(Annotation( "FMA:14506") "papillary process of caudate lobe of liver") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005050") AnnotationAssertion(rdfs:label "liver papillary process") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (mediastinum testis) AnnotationAssertion(Annotation( ) "The mediastinum testis is a network of fibrous connective tissue that extends from the upper to near the lower extremity of the testis, and is wider above than below. From its front and sides numerous imperfect septa (trabeculæ) are given off, which radiate toward the surface of the organ, and are attached to the tunica albuginea. They divide the interior of the organ into a number of incomplete spaces, called lobules. These are somewhat cone-shaped, being broad at their bases at the surface of the gland, and becoming narrower as they converge to the mediastinum. The mediastinum supports the rete testis and blood vessels of the testis in their passage to and from the substance of the gland[WP].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:18331") AnnotationAssertion( "FMA:19812") AnnotationAssertion( "MA:0003240") AnnotationAssertion(Annotation( "FMA:19812") "body of highmore") AnnotationAssertion( "hilum of testicle") AnnotationAssertion(Annotation( "FMA:19812") "mediastinum of testis") AnnotationAssertion(Annotation( "FMA:19812") "testis mediastinum") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005051") AnnotationAssertion(rdfs:label "mediastinum testis") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/b/b5/Hodenschema.svg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) # Class: (primary nerve cord) AnnotationAssertion(Annotation( ) "A cluster of neurons that is the most prominent longitudinally extending condensed part of a nervous system.") AnnotationAssertion( "some species have multiple longitudinal nerve cords; this class refers to the most prominent one, which is dorsal in chordates and ventral in others.") AnnotationAssertion( "BILA:0000136") AnnotationAssertion( "BTO:0001656") AnnotationAssertion(Annotation( "BILA:0000136") "nerve cord") AnnotationAssertion(Annotation( ) "true nerve cord") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005053") AnnotationAssertion(rdfs:label "primary nerve cord") AnnotationAssertion(rdfs:seeAlso "https://github.com/obophenotype/uberon/issues/691"^^xsd:anyURI) SubClassOf(Annotation( "cjm"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (primary dorsal nerve cord) AnnotationAssertion(Annotation( ) Annotation( ) "A nerve cord in the dorsal mid-line that is the most prominent nerve cord.") AnnotationAssertion( ) AnnotationAssertion( "BTO:0002329") AnnotationAssertion(Annotation( ) Annotation( ) Annotation( "BTO:0002329") "dorsal nerve cord") AnnotationAssertion(Annotation( ) "true dorsal nerve cord") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005054") AnnotationAssertion(rdfs:label "primary dorsal nerve cord") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (zone of long bone) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An organ part that is part of a long bone [Automatically generated definition].") AnnotationAssertion( "FMA:24008") AnnotationAssertion( "long bone zone") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005055") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "zone of long bone") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (external female genitalia) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An external genitalia that is part of a female reproductive system [Automatically generated definition].") AnnotationAssertion( "in eutherians, this is known as the vulva in and composed of the mons pubis, the labia majora and minora, the clitoris, the vestibule of the vagina and its glands, and the opening of the urethra and of the vagina [MP:0003126]") AnnotationAssertion( ) AnnotationAssertion( "BTO:0003100") AnnotationAssertion( "EMAPA:30984") AnnotationAssertion( "FMA:45649") AnnotationAssertion( "galen:FemaleExternalGenitalia") AnnotationAssertion(Annotation( "BTO:0003100") "external female genital organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "external genitalia of female reproductive system") AnnotationAssertion(Annotation( "FMA:45649") "female external genitalia") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0003100") "organa genitalia feminina externa") AnnotationAssertion( "UBERON:0005056") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "TODO: Relabel. Make distinct organ class. See https://github.com/obophenotype/uberon/issues/547") AnnotationAssertion(rdfs:label "external female genitalia") SubClassOf( ) SubClassOf( ) DisjointClasses( ) # Class: (immune organ) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An organ that is part of a immune system [Automatically generated definition].") AnnotationAssertion( "immune system organ") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005057") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "immune organ") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (hemolymphoid system gland) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A gland that is part of a hemolymphoid system [Automatically generated definition].") AnnotationAssertion(Annotation( "GO:0048534") "hemopoietic or lymphoid organ") AnnotationAssertion( "EMAPA:18766") AnnotationAssertion( "MA:0002962") AnnotationAssertion(Annotation( ) "hemopoietic or lymphoid gland") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "EMAPA:18766") "haemolymphoid system gland") AnnotationAssertion( "UBERON:0005058") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "hemolymphoid system gland") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete Drosophila lymph gland) AnnotationAssertion( "FBbt:00001668") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005059") AnnotationAssertion(rdfs:label "obsolete Drosophila lymph gland") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (neural groove) AnnotationAssertion(Annotation( ) Annotation( ) Annotation( "GO:0001842") "The median dorsal longitudinal groove formed in the embryo by the neural plate after the appearance of the neural folds.") AnnotationAssertion(Annotation( ) "The neural groove is a shallow median groove between the neural folds of an embryo. The neural folds are two longitudinal ridges that are caused by a folding up of the ectoderm in front of the primitive streak of the developing embryo. The groove gradually deepens as the neural folds become elevated, and ultimately the folds meet and coalesce in the middle line and convert the groove into a closed tube, the neural tube or canal, the ectodermal wall of which forms the rudiment of the nervous system. After the coalescence of the neural folds over the anterior end of the primitive streak, the blastopore no longer opens on the surface but into the closed canal of the neural tube, and thus a transitory communication, the neurenteric canal, is established between the neural tube and the primitive digestive tube. The coalescence of the neural folds occurs first in the region of the hind-brain, and from there extends forward and backward; toward the end of the third week the front opening (anterior neuropore) of the tube finally closes at the anterior end of the future brain, and forms a recess which is in contact, for a time, with the overlying ectoderm; the hinder part of the neural groove presents for a time a rhomboidal shape, and to this expanded portion the term sinus rhomboidalis has been applied. Before the neural groove is closed a ridge of ectodermal cells appears along the prominent margin of each neural fold; this is termed the neural crest or ganglion ridge, and from it the spinal and cranial nerve ganglia and the ganglia of the sympathetic nervous system are developed. By the upward growth of the mesoderm the neural tube is ultimately separated from the overlying ectoderm. The cephalic end of the neural groove exhibits several dilatations, which, when the tube is closed, assume the form of three vesicles; these constitute the three primary cerebral vesicles, and correspond respectively to the future fore-brain (prosencephalon), mid-brain (mesencephalon), and hind-brain (rhombencephalon). The walls of the vesicles are developed into the nervous tissue and neuroglia of the brain, and their cavities are modified to form its ventricles. The remainder of the tube forms the medulla spinalis or spinal cord; from its ectodermal wall the nervous and neuroglial elements of the medulla spinalis are developed while the cavity persists as the central canal[Wikipedia:Neural_groove].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0011071") AnnotationAssertion( "EMAPA:35594") AnnotationAssertion( "FMA:295624") AnnotationAssertion( "NCIT:C34224") AnnotationAssertion(Annotation( "ncithesaurus:Neural_Groove") "UMLS:C0814992") AnnotationAssertion( "XAO:0000248") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005061") AnnotationAssertion(rdfs:label "neural groove") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (neural fold) AnnotationAssertion(Annotation( ) Annotation( "GO:0001842") Annotation( "MP:0011256") "One of the two elevated edges of the neural groove[GO,MP].") AnnotationAssertion(Annotation( ) "In front of the primitive streak two longitudinal ridges, caused by a folding up of the ectoderm, make their appearance, one on either side of the middle line. These are named the neural folds; they commence some little distance behind the anterior end of the embryonic disk, where they are continuous with each other, and from there gradually extend backward, one on either side of the anterior end of the primitive streak. Also, after differentiation it turns into the neural tubes[Wikipedia:Neural_fold].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0001249") AnnotationAssertion( "FMA:295618") AnnotationAssertion( "NCIT:C34223") AnnotationAssertion(Annotation( "ncithesaurus:Neural_Fold") "UMLS:C0814993") AnnotationAssertion( "XAO:0004087") AnnotationAssertion(Annotation( "MP:0011256") "medullary fold") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005062") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "neural fold") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses( ) # Class: (left ventricular compact myocardium) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005063") AnnotationAssertion(rdfs:label "left ventricular compact myocardium") SubClassOf( ) SubClassOf(Annotation( "GO"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (left ventricular trabecular myocardium) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005064") AnnotationAssertion(rdfs:label "left ventricular trabecular myocardium") SubClassOf( ) SubClassOf(Annotation( "GO"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (right ventricular compact myocardium) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005065") AnnotationAssertion(rdfs:label "right ventricular compact myocardium") SubClassOf( ) SubClassOf(Annotation( "GO"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (right ventricular trabecular myocardium) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005066") AnnotationAssertion(rdfs:label "right ventricular trabecular myocardium") SubClassOf( ) SubClassOf(Annotation( "GO"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (neural rod) AnnotationAssertion(Annotation( "GO:0014024") Annotation( "ZFA:0000133") "A solid rod of neurectoderm derived from the neural keel. The neural rod is roughly circular in cross section. Neural rod formation occurs during primary neurulation in teleosts[GO]. An intermediate stage in the development of the central nervous system present during the segmentation period; the neural rod is roughly cylindrical in shape, forms from the neural keel, and is not yet hollowed out into the neural tube[ZFIN].") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0000133") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "An intermediate stage in the development of the central nervous system present during the segmentation period; the neural rod is roughly cylindrical in shape, forms from the neural keel, and is not yet hollowed out into the neural tube. Kimmel et al, 1995.[TAO]") AnnotationAssertion( "EFO:0003498") AnnotationAssertion( "TAO:0000133") AnnotationAssertion( "ZFA:0000133") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "GO:0014027") "neural tube rod") AnnotationAssertion( "UBERON:0005068") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "neural rod") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (neural fold hinge point) AnnotationAssertion(Annotation( "GO:0021504") "The median hinge point extends for the entire length of the neural tube, and the lateral hinge points do not form in the spinal cord region of the neural tube[GO].") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005069") AnnotationAssertion(rdfs:label "neural fold hinge point") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (anterior neuropore) AnnotationAssertion(Annotation( ) "The neuropore at the anterior (rostral) end of the neural tube.") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000768") Annotation( "VHOG"^^xsd:string) Annotation( ) "Anterior site of neural tube closure. [Evolution, Fourth_Edition_(2006)_McGraw-Hill, Function, Vertebrates:_Comparative_Anatomy, p.378, see_Kardong_KV][VHOG]") AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0004203") AnnotationAssertion( "EMAPA:16523") AnnotationAssertion( "RETIRED_EHDAA2:0001768") AnnotationAssertion( "VHOG:0000768") AnnotationAssertion( "cephalic neuropore") AnnotationAssertion(Annotation( ) "cranial neuropore") AnnotationAssertion(Annotation( "EMAPA:16523") "rostral neuropore") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005070") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "anterior neuropore") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses(Annotation( "lexical"^^xsd:string) ) # Class: (posterior neuropore) AnnotationAssertion(Annotation( ) "The neuropore at the posterior (caudal) end of the neural tube.") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000769") Annotation( "VHOG"^^xsd:string) Annotation( ) "Posterior site of neural tube closure. [Evolution, Fourth_Edition_(2006)_McGraw-Hill, Function, Vertebrates:_Comparative_Anatomy, p.378, see_Kardong_KV][VHOG]") AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0000676") AnnotationAssertion( "EHDAA:900") AnnotationAssertion( "EMAPA:16526") AnnotationAssertion( "RETIRED_EHDAA2:0000223") AnnotationAssertion( "VHOG:0000769") AnnotationAssertion(Annotation( "EMAPA:16526") "caudal neuropore") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005071") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "posterior neuropore") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete preganglionic parasympathetic nervous system) AnnotationAssertion( "UBERON:0011930") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005073") AnnotationAssertion(rdfs:label "obsolete preganglionic parasympathetic nervous system") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete postganglionic parasympathetic nervous system) AnnotationAssertion( "UBERON:0011929") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005074") AnnotationAssertion(rdfs:label "obsolete postganglionic parasympathetic nervous system") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (forebrain-midbrain boundary) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An anatomical boundary that adjacent_to a forebrain and adjacent_to a midbrain.") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0001367") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "The boundary between the diencephalon and the mesencephalon.[TAO]") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0001367") Annotation( "TAO"^^xsd:string) "relationship loss: develops_from forebrain midbrain boundary neural tube (TAO:0007040)[TAO]") AnnotationAssertion( "EMAPA:36449") AnnotationAssertion( "TAO:0001367") AnnotationAssertion( "ZFA:0001367") AnnotationAssertion(Annotation( "ZFA:0001367") "diencephalic-mesencephalic boundary") AnnotationAssertion(Annotation( "ZFA:0001367") "forebrain midbrain boundary") AnnotationAssertion(Annotation( "EMAPA:36449") "forebrain-midbrain boundary region") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005075") AnnotationAssertion(rdfs:label "forebrain-midbrain boundary") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "definitional"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (hindbrain-spinal cord boundary) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An anatomical boundary that adjacent_to a hindbrain and adjacent_to a spinal cord.") AnnotationAssertion( "hindbrain-spinal cord boundary region") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005076") AnnotationAssertion(rdfs:label "hindbrain-spinal cord boundary") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (neuropore) AnnotationAssertion(Annotation( "MGI:anna"^^xsd:string) "A temporary opening leading from the central canal of the embryonic neural tube to the exterior.") AnnotationAssertion( ) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005077") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "neuropore") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lamina terminalis of neural tube) AnnotationAssertion(Annotation( "MGI:anna"^^xsd:string) "The anterior-most (rostral) portion of the wall of the neural tube, formed by closure of the anterior neuropore; the median strip of the anterior wall of the prosencephalon, which persists in a relatively unchanged state as the cerebral hemispheres grow out forward beyond the original anterior end of the prosencephalon.") AnnotationAssertion( "lamina terminalis") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:LTer") AnnotationAssertion( "BM:LT") AnnotationAssertion( "EHDAA2:0000903") AnnotationAssertion( "EHDAA:1983") AnnotationAssertion( "EHDAA:2661") AnnotationAssertion( "EMAPA:16904") AnnotationAssertion( "VHOG:0001547") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005078") AnnotationAssertion(rdfs:label "lamina terminalis of neural tube") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses( ) # Class: (metanephric ureteric bud) AnnotationAssertion(Annotation( "GO:0035502") "The portion of the ureteric bud tube that contributes to the morphogenesis of the metanephros[GO].") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005080") AnnotationAssertion(rdfs:label "metanephric ureteric bud") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (ureter ureteric bud) AnnotationAssertion(Annotation( "GO:0035503") "The portion of the ureteric bud that contributes to the morphogenesis of the ureter. The ureter ureteric bud is the initial structure that forms the ureter[GO].") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005081") AnnotationAssertion(rdfs:label "ureter ureteric bud") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (tube lumen) AnnotationAssertion(Annotation( "GO:0060609") "A hole in a tube[GO].") AnnotationAssertion( "AEO:0000078") AnnotationAssertion( "EHDAA2:0004618") AnnotationAssertion( "RETIRED_EHDAA2:0003078") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005082") AnnotationAssertion(rdfs:label "tube lumen") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (nipple sheath) AnnotationAssertion(Annotation( "GO:0060659") Annotation( "MGI:anna"^^xsd:string) "A circular ingrowth of the epidermis around the region of the mammary sprout[GO].") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005083") AnnotationAssertion(rdfs:label "nipple sheath") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (ectodermal placode) AnnotationAssertion(Annotation( "GO:0060788") "An ectodermal placode is a thickening of the ectoderm that is the primordium of many structures derived from the ectoderm[GO].") AnnotationAssertion( "consder adding placodal ectoderm as a distinct class? Also place placodal ectoderm as develops_from ectoderm; need to check taxon-appropriateness") AnnotationAssertion( "With the exception of the adenohypophysis, homologues of the nonneurogenic placodes (e.g. placodes giving rise to the teeth, hair follicles and lens), appear to be lacking in invertebrate chordates.") AnnotationAssertion(Annotation( "GO") Annotation( ) "in GO, covers optic, otic, olfactory, mammary, hair, tooth, sebaceous - and also insect structures") AnnotationAssertion( "AEO:0000218") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "AEO:0000112") "epithelial placode") AnnotationAssertion( "UBERON:0005085") AnnotationAssertion(rdfs:label "ectodermal placode") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (hair follicle placode) AnnotationAssertion(Annotation( ) "A bud-like thickening in the epidermis consisting of elongated keratinocytes, which at the distal end are in touch with numerous aggregated specialized dermal fibroblasts, the dermal condensate.") AnnotationAssertion(Annotation( "GO:0060789") "An hair follicle placode is a thickening of the ectoderm that will give rise to the hair follicle bud[GO].") AnnotationAssertion( "EMAPA:36479") AnnotationAssertion(Annotation( ) "hair placode") AnnotationAssertion( "vibrissa placode") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "ISBN:9780878932504") "hair gem") AnnotationAssertion(Annotation( ) "hair germ") AnnotationAssertion(Annotation( "ISBN:9780878932504") "hair peg") AnnotationAssertion( "UBERON:0005086") AnnotationAssertion(rdfs:label "hair follicle placode") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "Wikipathways:WP2062") ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (tooth placode) AnnotationAssertion(Annotation( "GO:0060790") "An tooth placode is a thickening of the ectoderm that will give rise to the tooth bud[GO].") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0001153") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "Placode that develops into a tooth. The placode is a thickening of the pharyngeal epithelium.[TAO]") AnnotationAssertion( "In mammals this may be located in the alveolar ridges, but note that some species such as zebrafish have ceratobranchial teeth. Sharks have dermal denticles that share developmental origins. Currently we don't include location information due to this diversity, but in future we may include specific subclasses and/or taxon GCIs.") AnnotationAssertion( "BTO:0001511") AnnotationAssertion( "TAO:0001153") AnnotationAssertion( "ZFA:0001153") AnnotationAssertion( "dental anlage") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "dental placode") AnnotationAssertion(Annotation( "ZFA:0001153") "dental primordium") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "odontogenic placode") AnnotationAssertion(Annotation( "MP:0000117") "tooth anlage") AnnotationAssertion(Annotation( "MP:0000117") "tooth primordium") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "ZFA:0001153") "tooth germ") AnnotationAssertion( "UBERON:0005087") AnnotationAssertion(rdfs:label "tooth placode") SubClassOf( ) SubClassOf(Annotation( "NCBIBook:NBK53175"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (sebaceous gland placode) AnnotationAssertion(Annotation( "GO:0060791") "A sebaceous gland placode is a thickening of the ectoderm that will give rise to the sebaceous gland bud[GO].") AnnotationAssertion( "TODO - add bud") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005088") AnnotationAssertion(rdfs:label "sebaceous gland placode") SubClassOf( ) SubClassOf(Annotation( "NCBIBook:NBK53175"^^xsd:string) ) SubClassOf(Annotation( "Wikipathways:WP2062") ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (sweat gland placode) AnnotationAssertion(Annotation( "GO:0060793") "An sweat gland placode is a thickening of the ectoderm that will give rise to the sweat gland bud[GO].") AnnotationAssertion( "TODO - add bud") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005089") AnnotationAssertion(rdfs:label "sweat gland placode") SubClassOf( ) SubClassOf(Annotation( "NCBIBook:NBK53175"^^xsd:string) ) SubClassOf(Annotation( "Wikipathways:WP2062") ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (muscle structure) AnnotationAssertion(Annotation( "GO:0061061") "Muscle structures are contractile cells, tissues or organs that are found in multicellular organisms[GO].") AnnotationAssertion( "in some organisms such as drosophila, muscles can be single cells. This class groups together all discrete muscle elements, from multicellular muscle organs in vertebrates, to individual single-cell muscles in drisophila") AnnotationAssertion( "EMAPA:32715") AnnotationAssertion( "FBbt:00005073") AnnotationAssertion( "FMA:30316") AnnotationAssertion(Annotation( "FMA:30316") "musculus") AnnotationAssertion( "uberon") AnnotationAssertion( "muscle") AnnotationAssertion( "muscle element") AnnotationAssertion( "UBERON:0005090") AnnotationAssertion(rdfs:label "muscle structure") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (left horn of sinus venosus) AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000488") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "DOI:10.1152/physrev.00006.2003 Moorman AFM, Christoffels VM, Cardiac Chamber Formation: Development, Genes, and Evolution. Physiological Reviews (2003)") "Three major adaptations, or 'novel cardiac components', that were not present in the ancestor chordate heart tube can be distinguished in the lower vertebrate heart: the atrium, ventricle, and possibly the muscular sinus venosus.[uncertain][VHOG]") AnnotationAssertion( "EHDAA2:0001840") AnnotationAssertion( "EHDAA:482") AnnotationAssertion( "EMAPA:16238") AnnotationAssertion( "FMA:70321") AnnotationAssertion( "VHOG:0000488") AnnotationAssertion(Annotation( "VHOG:0000488") "sinus venosus left horn") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005091") AnnotationAssertion(rdfs:label "left horn of sinus venosus") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (right horn of sinus venosus) AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000489") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "DOI:10.1152/physrev.00006.2003 Moorman AFM, Christoffels VM, Cardiac Chamber Formation: Development, Genes, and Evolution. Physiological Reviews (2003") "Three major adaptations, or 'novel cardiac components', that were not present in the ancestor chordate heart tube can be distinguished in the lower vertebrate heart: the atrium, ventricle, and possibly the muscular sinus venosus.[uncertain][VHOG]") AnnotationAssertion( "EHDAA2:0001841") AnnotationAssertion( "EHDAA:484") AnnotationAssertion( "EMAPA:16239") AnnotationAssertion( "FMA:70318") AnnotationAssertion( "VHOG:0000489") AnnotationAssertion(Annotation( "VHOG:0000489") "sinus venosus right horn") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005092") AnnotationAssertion(rdfs:label "right horn of sinus venosus") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (embryonic cement gland) AnnotationAssertion(Annotation( "GO:0071570") Annotation( "XAO:0000033") "A simple mucus-secreting structure that is positioned at the front of the embryo, attaches the newly hatched embryo to a support before the hatchling can swim well or feed, and marks the anterior-most dorsal ectoderm[XAO].") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0010373") Annotation( "AAO"^^xsd:string) Annotation( "AAO:BJB"^^xsd:string) "A simple mucus-secreting structure that is positioned at the front of the embryo, attaches the newly hatched embryo to a support before the hatchling can swim well or feed, and marks the anterior-most dorsal ectoderm.[AAO]") AnnotationAssertion(Annotation( "XAO:0000033") "cement gland") AnnotationAssertion( "AAO:0010373") AnnotationAssertion( "XAO:0000033") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005093") AnnotationAssertion(rdfs:label "embryonic cement gland") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (kidney rudiment) AnnotationAssertion( "class added for consistency with GO - consider merging with kidney mesenchyme.") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "GOC:mtg_kidney_jan10") "kidney anlage") AnnotationAssertion( "UBERON:0005095") AnnotationAssertion(rdfs:label "kidney rudiment") SubClassOf( ) SubClassOf(Annotation( "GO"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (descending thin limb) AnnotationAssertion(Annotation( ) Annotation( "GO:0072022") "The descending thin limb is a part of the loop of Henle situated just after the proximal straight tubule (S3). It extends to the tip of the loop of Henle[GO].") AnnotationAssertion( "UBERON:0005165") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:35514") AnnotationAssertion( "FMA:17719") AnnotationAssertion( "MA:0002625") AnnotationAssertion( "descending thin limb of loop of Henle") AnnotationAssertion( "loop of Henle descending thin limb") AnnotationAssertion(Annotation( "MA:0002625") "loop of Henle thin descending limb") AnnotationAssertion(Annotation( "FMA:17719") "pars descendens (tubulus attenuatus)") AnnotationAssertion( "thin descending limb") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "descending limb of Henle's loop") AnnotationAssertion(Annotation( ) "descending limb of loop of Henle") AnnotationAssertion(Annotation( ) "thin descending limb of loop of Henle") AnnotationAssertion(Annotation( ) "thin descending limb of the loop of Henle") AnnotationAssertion(Annotation( ) "thin descending loop of Henle") AnnotationAssertion( "UBERON:0005096") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "descending thin limb") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/0/02/Gray1128.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (renal connecting tubule) AnnotationAssertion(Annotation( ) Annotation( "GO:0072027") "The connecting tubule is a tubular segment of the nephron; it connects the distal convoluted tubule to the collecting duct[GO].") AnnotationAssertion( ) AnnotationAssertion( "BTO:0004539") AnnotationAssertion( "EMAPA:27758") AnnotationAssertion( "EMAPA:27790") AnnotationAssertion( "EMAPA:28011") AnnotationAssertion( "MA:0002610") AnnotationAssertion(Annotation( "MA:0002610") "connecting tubule") AnnotationAssertion(Annotation( "MA:0002610") "kidney connecting tubule") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "tubulus renalis arcuatus") AnnotationAssertion( "UBERON:0005097") AnnotationAssertion(rdfs:label "renal connecting tubule") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/0/02/Gray1128.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "Wikipedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (short descending thin limb) AnnotationAssertion(Annotation( "GO:0072063") "The short descending thin limb is the descending thin limb of a short nephron that has a squamous epithelial morphology[GO].") AnnotationAssertion( "TODO - epithelium types") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005099") AnnotationAssertion(rdfs:label "short descending thin limb") SubClassOf( ) SubClassOf( ) # Class: (long descending thin limb) AnnotationAssertion(Annotation( "GO:0072064") "The long descending limb starts in the inner stripe of the outer medulla and extends into the inner medulla[GO].") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005100") AnnotationAssertion(rdfs:label "long descending thin limb") SubClassOf( ) # Class: (early distal convoluted tubule) AnnotationAssertion(Annotation( "GO:0072067") "The early distal convoluted tubule contains DCT cells and is vasopressin-insensitive[GO].") AnnotationAssertion( "EMAPA:28393") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005101") AnnotationAssertion(rdfs:label "early distal convoluted tubule") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (late distal convoluted tubule) AnnotationAssertion(Annotation( "GO:0072068") "The late distal convoluted tubule contains DCT cells and intercalated (IC) alpha and beta cells and is vasopressin-sensitive[GO].") AnnotationAssertion( "TODO - CL") AnnotationAssertion( "EMAPA:28393") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005102") AnnotationAssertion(rdfs:label "late distal convoluted tubule") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (mesonephric epithelium) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An epithelium that is part of a mesonephros [Automatically generated definition].") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005103") AnnotationAssertion(rdfs:label "mesonephric epithelium") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (anterior mesonephric tubule) AnnotationAssertion( "EMAPA:30562") AnnotationAssertion(Annotation( "EMAPA:30562") "cranial mesonephric tubule") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005104") AnnotationAssertion(rdfs:label "anterior mesonephric tubule") SubClassOf( ) DisjointClasses(Annotation( "lexical"^^xsd:string) ) # Class: (posterior mesonephric tubule) AnnotationAssertion( "EMAPA:30571") AnnotationAssertion(Annotation( "EMAPA:30574") "caudal mesonephric tubule") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005105") AnnotationAssertion(rdfs:label "posterior mesonephric tubule") SubClassOf( ) # Class: (metanephric tubule) AnnotationAssertion(Annotation( "GO:0072173") "A metanephric tubule is an epithelial tube that is part of the metanephros[GO].") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001526") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0072528305 Kardong KV, Vertebrates: Comparative Anatomy, Function, Evolution (2006) p.543") "The ureteric diverticulum grows dorsally into the posterior region of the nephric ridge. Here it enlarges and stimulates the growth of metanephric tubules that come to make up the metanephric kidney. The metanephros becomes the adult kidney of amniotes.[well established][VHOG]") AnnotationAssertion( "VHOG:0001526") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005106") AnnotationAssertion(rdfs:label "metanephric tubule") SubClassOf( ) SubClassOf( ) SubClassOf( ) # Class: (metanephric cap) AnnotationAssertion(Annotation( ) Annotation( "GO:0072185") "The metanephric cap is formed by the condensation of metanephric mesenchymal cells surrounding the ureteric bud tip[GO]. Mesenchyme closely apposed to the tips of the buds is called cap mesenchyme; it will later go on to form nephrons etc[GUDMAP].") AnnotationAssertion( "TODO - check EMAPA") AnnotationAssertion( "EMAPA:27621") AnnotationAssertion( "MA:0002997") AnnotationAssertion(Annotation( "EMAPA:27621") "cap mesenchyme") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "EMAPA:27621") "condensed mesenchyme") AnnotationAssertion( "UBERON:0005107") AnnotationAssertion(rdfs:label "metanephric cap") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (metanephric epithelium) AnnotationAssertion(Annotation( "GO:0072207") "An epithelium is a tissue that covers the internal or external surfaces of an anatomical structure[GO].") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005108") AnnotationAssertion(rdfs:label "metanephric epithelium") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (metanephric smooth muscle tissue) AnnotationAssertion(Annotation( ) Annotation( "GO:0072208") "Any smooth muscle tissue that is part of a metanephros.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005109") AnnotationAssertion(rdfs:label "metanephric smooth muscle tissue") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (metanephric nephron) AnnotationAssertion(Annotation( "GO:0072273") "A metanephric nephron is the functional unit of the metanephros[GO].") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000719") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "DOI:10.1093/icb/34.4.542 Ruppert EE, Evolutionary Origin of the Vertebrate Nephron. Integrative and Comparative Biology (1994)") "The primitive form of the vertebrate nephron consists of a vascular filtration surface overlain with podocytes, a specialized coelomic cavity to receive the ultrafiltrate, and a tubule for modification to final urine. Although previously thought to be unique to the vertebrates, this design is now known to be widespread among invertebrates, including most of the protochordates, and especially their larvae.[well established][VHOG]") AnnotationAssertion( "UBERON:0005142") AnnotationAssertion( "VHOG:0000719") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005110") AnnotationAssertion(rdfs:label "metanephric nephron") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "Wikipedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "Bgee:AN"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (metanephric pyramid) AnnotationAssertion(Annotation( "GO:0072211") "Metanephric pyramids are the conical masses that constitute the renal medulla in a metanephros; they contain the loops of Henle and the medullary collecting ducts[GO].") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005111") AnnotationAssertion(rdfs:label "metanephric pyramid") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (metanephric cortex mesenchyme) AnnotationAssertion( "EHDAA2:0001140") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005113") AnnotationAssertion(rdfs:label "metanephric cortex mesenchyme") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (metanephric ascending thin limb) AnnotationAssertion(Annotation( "GO:0072218") "The metanephric ascending thin limb is a segment of a nephron tubule in the metanephros lying in the inner medulla that is permeable to ions but not to water and has a simple epithelium; active transepithelial solute transport is absent[GO].") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005114") AnnotationAssertion(rdfs:label "metanephric ascending thin limb") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (metanephric cortical collecting duct) AnnotationAssertion(Annotation( "GO:0072219") "The metanephric cortical collecting duct is the portion of the metanephric collecting duct that resides in the renal cortex[GO].") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005115") AnnotationAssertion(rdfs:label "metanephric cortical collecting duct") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (metanephric descending thin limb) AnnotationAssertion(Annotation( "GO:0072220") "It extends to the tip of the metanephric loop of Henle[GO].") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005116") AnnotationAssertion(rdfs:label "metanephric descending thin limb") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (metanephric distal convoluted tubule) AnnotationAssertion(Annotation( "GO:0072221") "The metanephric distal convoluted tubule is a portion of the metanephric nephron tubule that connects the metanephric loop of Henle to the collecting duct[GO].") AnnotationAssertion( "VHOG:0001569") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005117") AnnotationAssertion(rdfs:label "metanephric distal convoluted tubule") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (metanephric early distal convoluted tubule) AnnotationAssertion(Annotation( "GO:0072222") "The metanephric early distal convoluted tubule contains metanephric DCT cells and is vasopressin-insensitive[GO].") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005118") AnnotationAssertion(rdfs:label "metanephric early distal convoluted tubule") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (metanephric glomerular mesangium) AnnotationAssertion(Annotation( "GO:0072223") "The metanephric glomerular mesangium is the thin membrane connective tissue composed of mesangial cells in the metanephros, which helps to support the capillary loops in a renal glomerulus[GO].") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005119") AnnotationAssertion(rdfs:label "metanephric glomerular mesangium") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (metanephric late distal convoluted tubule) AnnotationAssertion(Annotation( "GO:0072225") "The metanephric late distal convoluted tubule contains metanephric DCT cells and intercalated (IC) alpha and beta cells and is vasopressin-sensitive[GO].") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005120") AnnotationAssertion(rdfs:label "metanephric late distal convoluted tubule") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (metanephric long descending thin limb bend) AnnotationAssertion(Annotation( "GO:0072226") "The metanephric long descending thin limb bend is a part of the descending thin limb of a long nephron that lies beyond the prebend segment in the metanephros[GO].") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005121") AnnotationAssertion(rdfs:label "metanephric long descending thin limb bend") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (metanephric macula densa) AnnotationAssertion(Annotation( "GO:0072227") "The metanephric macula densa is an area of specialized cells in the distal tubule of the metanephros that makes contact with the vascular pole of the glomerulus[GO].") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005122") AnnotationAssertion(rdfs:label "metanephric macula densa") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (metanephric prebend segment) AnnotationAssertion(Annotation( "GO:0072228") "The metanephric prebend segment is a part of the metanephric descending thin limb that lies before the bend and exhibits permeabilities characteristic of the ascending limb, especially negligible water permeability[GO].") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005123") AnnotationAssertion(rdfs:label "metanephric prebend segment") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (metanephric proximal convoluted tubule) AnnotationAssertion(Annotation( "GO:0072229") "The metanephric proximal convoluted tubule is the most proximal portion of the metanephric proximal tubule and extends from the metanephric glomerular capsule to the metanephric proximal straight tubule[GO].") AnnotationAssertion( "VHOG:0001570") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005124") AnnotationAssertion(rdfs:label "metanephric proximal convoluted tubule") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (metanephric proximal straight tubule) AnnotationAssertion(Annotation( "GO:0072230") "The metanephric proximal straight tubule is the part of the metanephric descending limb that extends from the metanephric proximal convoluted tubule to the metanephric descending thin tubule[GO].") AnnotationAssertion( "TODO - place mammalian xrefs here rather than at parent") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005125") AnnotationAssertion(rdfs:label "metanephric proximal straight tubule") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (metanephric S1) AnnotationAssertion(Annotation( "GO:0072231") "The S1 portion is the initial portion of the metanephric proximal convoluted tubule and is responsible for avid reabsorption of water and solutes[GO].") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005126") AnnotationAssertion(rdfs:label "metanephric S1") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (metanephric thick ascending limb) AnnotationAssertion(Annotation( "GO:0072233") "At the macula densa, the thick ascending limb connects to the distal convoluted tubule[GO].") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005127") AnnotationAssertion(rdfs:label "metanephric thick ascending limb") SubClassOf( ) SubClassOf( ) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (metanephric distal tubule) AnnotationAssertion(Annotation( "GO:0072235") "The metanephric distal tubule is a metanephric nephron tubule that begins at the metanephric macula densa and extends to the metanephric connecting tubule[GO].") AnnotationAssertion( "UBERON:0005150") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005129") AnnotationAssertion(rdfs:label "metanephric distal tubule") SubClassOf( ) SubClassOf( ) # Class: (metanephric loop of Henle) AnnotationAssertion(Annotation( "GO:0072236") "The metanephric loop of Henle is a metanephric nephron tubule that connects the proximal convoluted tubule to the distal convoluted tubule in the metanephros[GO].") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005130") AnnotationAssertion(rdfs:label "metanephric loop of Henle") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (metanephric long nephron) AnnotationAssertion(Annotation( "GO:0072238") "Long nephrons are associated with juxtamedullary glomeruli and extend into the inner medulla in the metanephros[GO].") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005132") AnnotationAssertion(rdfs:label "metanephric long nephron") SubClassOf( ) SubClassOf( ) # Class: (metanephric glomerulus vasculature) AnnotationAssertion(Annotation( "GO:0072239") "The metanephric glomerulus vasculature is composed of the tubule structures that carry blood or lymph in the metanephric glomerulus[GO].") AnnotationAssertion( "UBERON:0005143") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005133") AnnotationAssertion(rdfs:label "metanephric glomerulus vasculature") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (metanephric nephron epithelium) AnnotationAssertion(Annotation( "GO:0072243") "The metanephric nephron epithelium is a tissue that covers the surface of a nephron in the metanephros[GO].") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005134") AnnotationAssertion(rdfs:label "metanephric nephron epithelium") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (metanephric glomerular epithelium) AnnotationAssertion(Annotation( "GO:0072244") "A metanephric glomerular visceral epithelial cell is a specialized epithelial cell that contains 'feet' that interdigitate with the 'feet' of other glomerular epithelial cells in the metanephros[GO].") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005135") AnnotationAssertion(rdfs:label "metanephric glomerular epithelium") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (metanephric glomerular endothelium) AnnotationAssertion(Annotation( "GO:0072264") "The metanephric glomerular endothelium is an epithelial tissue that covers the internal surfaces of the glomerulus of the metanephros[GO].") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005136") AnnotationAssertion(rdfs:label "metanephric glomerular endothelium") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (metanephric capsule) AnnotationAssertion(Annotation( "GO:0072213") "The metanephric capsule is the tough fibrous layer surrounding the metanephros, covered in a thick layer of perinephric adipose tissue. It provides some protection from trauma and damage[GO].") AnnotationAssertion( "UBERON:0005112") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005137") AnnotationAssertion(rdfs:label "metanephric capsule") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (metanephric long descending thin limb) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005139") AnnotationAssertion(rdfs:label "metanephric long descending thin limb") SubClassOf( ) SubClassOf( ) # Class: (metanephric short nephron) AnnotationAssertion(Annotation( "GO:0072270") "Short nephrons are associated with mid-cortical and superficial glomeruli, are situated entirely in the outer medulla, and have no thin ascending limb[GO].") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005140") AnnotationAssertion(rdfs:label "metanephric short nephron") SubClassOf( ) SubClassOf( ) # Class: (metanephric short descending thin limb) AnnotationAssertion(Annotation( "GO:0072271") "The metanephric short descending thin limb is the descending thin limb of a short nephron in the metanephros that has a squamous epithelial morphology[GO].") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005141") AnnotationAssertion(rdfs:label "metanephric short descending thin limb") SubClassOf( ) SubClassOf( ) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (metanephric glomerular capillary) AnnotationAssertion(Annotation( "GO:0072277") "This process pertains to the initial formation of a structure from unspecified parts[GO].") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005144") AnnotationAssertion(rdfs:label "metanephric glomerular capillary") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (metanephric comma-shaped body) AnnotationAssertion(Annotation( "GO:0072278") "The metanephric comma-shaped body is the precursor structure to the metanephric S-shaped body that contributes to the morphogenesis of a nephron in the metanephros[GO].") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005145") AnnotationAssertion(rdfs:label "metanephric comma-shaped body") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (metanephric nephron tubule) AnnotationAssertion(Annotation( "GO:0072282") "A metanephric nephron tubule is an epithelial tube that is part of the metanephric nephron, the functional part of the metanephros[GO].") AnnotationAssertion( "UBERON:0005128") AnnotationAssertion( "UBERON:0005152") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005146") AnnotationAssertion(rdfs:label "metanephric nephron tubule") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "ISBN:9780878932504") ObjectSomeValuesFrom( )) # Class: (metanephric renal vesicle) AnnotationAssertion(Annotation( "GO:0072283") "The renal vesicle is the primordial structure of the metanephric nephron epithelium, and is formed by the condensation of mesenchymal cells[GO].") AnnotationAssertion( "EHDAA2:0001245") AnnotationAssertion( "EHDAA:9346") AnnotationAssertion( "EMAPA:27678") AnnotationAssertion( "metanephric vesicle") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005147") AnnotationAssertion(rdfs:label "metanephric renal vesicle") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (metanephric S-shaped body) AnnotationAssertion(Annotation( "GO:0072284") "The metanephric S-shaped body is the successor of the metanephric comma-shaped body that contributes to the morphogenesis of a nephron in the metanephros[GO].") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005148") AnnotationAssertion(rdfs:label "metanephric S-shaped body") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (metanephric connecting tubule) AnnotationAssertion(Annotation( "GO:0072286") "The metanephric connecting tubule is a tubular segment of the metanephric nephron; it connects the distal convoluted tubule to the collecting duct in the metanephros[GO].") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005149") AnnotationAssertion(rdfs:label "metanephric connecting tubule") SubClassOf( ) SubClassOf( ) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (metanephric proximal tubule) AnnotationAssertion(Annotation( "GO:0072288") "The metanephric proximal tubule is a metanephric nephron tubule that connects Bowman's capsule to the descending thin limb of the loop of Henle in the metanephros. It has a brush border epithelial morphology[GO].") AnnotationAssertion( "UBERON:0005131") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005151") AnnotationAssertion(rdfs:label "metanephric proximal tubule") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (epithelial bud) AnnotationAssertion(Annotation( "GO:0060572") "A bud is a protrusion that forms from an epithelial sheet by localized folding.") AnnotationAssertion( "BTO:0001639") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005153") AnnotationAssertion(rdfs:label "epithelial bud") SubClassOf( ) # Class: (epithelial cord) AnnotationAssertion(Annotation( "AEO:0000216") "A cord of epithelial cells without a lumen and usually several cells thick.") AnnotationAssertion( "AEO:0000216") AnnotationAssertion( "EHDAA2:0004052") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005154") AnnotationAssertion(rdfs:label "epithelial cord") SubClassOf(Annotation( "AEO"^^xsd:string) ) # Class: (reproductive structure) AnnotationAssertion(Annotation( ) "Any anatomical structure that is part of the reproductive system.") AnnotationAssertion( "reproductive system element") AnnotationAssertion( "reproductive system structure") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005156") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "reproductive structure") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (epithelial fold) AnnotationAssertion(Annotation( "GO:0060571") "An epithelial sheet bent on a linear axis.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005157") AnnotationAssertion(rdfs:label "epithelial fold") SubClassOf( ) # Class: (parenchyma of central nervous system) AnnotationAssertion(Annotation( ) Annotation( "CL:tm") "The functional tissue of the central nervous system consisting of neurons and glial cells.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "CNS parenchyma") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "central nervous system parenchyma") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "parenchyma of CNS") AnnotationAssertion( "parenchyma of central nervous system") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005158") AnnotationAssertion(rdfs:label "parenchyma of central nervous system") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pyramid of medulla oblongata) AnnotationAssertion(Annotation( ) "The anterior or ventral portion of the medulla oblongata is named the pyramid and lies between the anterior median fissure and the antero-lateral sulcus. Its upper end is slightly constricted, and between it and the pons the fibers of the abducent nerve emerge; a little below the pons it becomes enlarged and prominent, and finally tapers into the anterior funiculus of the medulla spinalis, with which, at first sight, it appears to be directly continuous[WP].") AnnotationAssertion(Annotation( "FMA:75254") "medullary pyramid") AnnotationAssertion(Annotation( "FMA:75254") "pyramid of medulla") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:pym") AnnotationAssertion( "BM:Me-Py") AnnotationAssertion( "DHBA:12535") AnnotationAssertion( "FMA:75254") AnnotationAssertion(Annotation( "FMA:75254") "lobule VIII of Larsell") AnnotationAssertion(Annotation( ) "pyramid of medulla oblongata") AnnotationAssertion(Annotation( "FMA:75254") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "pyramis (medullae oblongatae)") AnnotationAssertion(Annotation( "FMA:75254") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "pyramis bulbi") AnnotationAssertion(Annotation( "FMA:75254") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "pyramis medullae oblongatae") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005159") AnnotationAssertion(rdfs:label "pyramid of medulla oblongata") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (vestigial structure) AnnotationAssertion(Annotation( "PATOC:MAH") "A remnant structure from earlier development or evolution.") AnnotationAssertion( ) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005160") AnnotationAssertion(rdfs:label "vestigial structure") SubClassOf( ) # Class: (multi cell part structure) AnnotationAssertion(Annotation( "CARO:0001000") "A structure consisting of multiple cell components but which is not itself a cell and does not have (complete) cells as a part.") AnnotationAssertion(Annotation( "CARO") Annotation( "FMA"^^xsd:string) "we go with the FMA classification rather than the CARO one. FMA def: 'Anatomical cluster which has as direct parts cell parts from two or more cells.'") AnnotationAssertion( "AAO:0011000") AnnotationAssertion( "CARO:0001000") AnnotationAssertion( "FBbt:00007060") AnnotationAssertion( "FMA:83115") AnnotationAssertion(Annotation( "CARO:0001000") "multi-cell-component structure") AnnotationAssertion(Annotation( "CARO:0001000") "multi-cell-part structure") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:83115") "cell part cluster") AnnotationAssertion( "UBERON:0005162") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "multi cell part structure") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (ascending limb of loop of Henle) AnnotationAssertion(Annotation( ) Annotation( "MP:0011342") "The distal part of the loop of Henle that is impermeable to water and actively pumps sodium out of the filtrate to generate the hypertonic interstitium that drives countercurrent exchange; it consists of an initial very thin segment lined by simple squamous epithelium followed by a distal thick segment lined by simple cuboidal epithelium[MP].") AnnotationAssertion( "TODO - thick/thin check. Also relationship to distal tubule. We need a home for MA:0002634-renal straight tubule") AnnotationAssertion( "ascending limb") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:35510") AnnotationAssertion( "FMA:17717") AnnotationAssertion( "MA:0001676") AnnotationAssertion( "NCIT:C32154") AnnotationAssertion(Annotation( "ncithesaurus:Ascending_Limb_of_the_Henle_s_Loop") "UMLS:C0227658") AnnotationAssertion( "ascending limb of Henle's loop") AnnotationAssertion(Annotation( "MP:0011342") "loop of Henle ascending limb") AnnotationAssertion( "uberon") AnnotationAssertion( "distal straight tubule") AnnotationAssertion( "UBERON:0005164") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "ascending limb of loop of Henle") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (papillary duct) AnnotationAssertion(Annotation( ) "The terminal portions of the medullary collecting ducts are the papillary ducts, which end at the renal papilla and empty into a minor calyx.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0004540") AnnotationAssertion( "EMAPA:35655") AnnotationAssertion( "MA:0001646") AnnotationAssertion( "papillary duct") AnnotationAssertion( "papillary duct of kidney") AnnotationAssertion( "renal papillary duct") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "MP:0011331") "Bellini's duct") AnnotationAssertion( "duct of Bellini") AnnotationAssertion( "UBERON:0005167") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "papillary duct") SubClassOf( ) # Class: (renal interlobular vein) AnnotationAssertion(Annotation( "ISBN:0-683-40008-8"^^xsd:string) Annotation( "MP:0011326") "Any of the veins that parallel the interlobular arteries, receiving blood from the peritubular capillary plexus and empty into the arcuate veins.") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:28218") AnnotationAssertion( "FMA:71634") AnnotationAssertion( "MA:0002594") AnnotationAssertion(Annotation( "MA:0002594") "interlobular vein") AnnotationAssertion(Annotation( "FMA:71634") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "venae interlobulares renis") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:71634") "interlobular veins of kidney") AnnotationAssertion(Annotation( "FMA:71634") "set of interlobular veins of kidney") AnnotationAssertion(Annotation( ) Annotation( ) "venae interlobulares renis") AnnotationAssertion( "UBERON:0005168") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "renal interlobular vein") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/0/02/Gray1128.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses( ) # Class: (interstitial tissue) AnnotationAssertion(Annotation( ) "Connective tissue between the cellular elements of a structure.") AnnotationAssertion( "specify differentia from stroma") AnnotationAssertion( "interstital") AnnotationAssertion( ) AnnotationAssertion( "FMA:86301") AnnotationAssertion( "interstitium") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005169") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "interstitial tissue") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (granulosa cell layer) AnnotationAssertion(Annotation( ) "A layer of the ovarian follicle that consists of granulosa cells.") AnnotationAssertion( "At one part of the mature follicle the cells of the membrana granulosa are collected into a mass which projects into the cavity of the follicle. This is termed the discus proligerus. [Wikipedia:Membrana_granulosa, Wikipedia:Membrana_granulosa]") AnnotationAssertion( "membrana granulosa") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EFO:0003628") AnnotationAssertion( "EMAPA:35633") AnnotationAssertion( "FMA:18660") AnnotationAssertion( "MA:0001460") AnnotationAssertion( "TAO:0001112") AnnotationAssertion( "ZFA:0001112") AnnotationAssertion(Annotation( "FMA:18660") "granulosa cell layer of ovarian follicle") AnnotationAssertion(Annotation( "FMA:18660") "membrana granulosa of ovarian follicle") AnnotationAssertion(Annotation( "MA:0001460") "ovary stratum granulosum") AnnotationAssertion(Annotation( "FMA:18660") "stratum granulosum of ovarian follicle") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "TAO:0001112") "granulosa cell layer") AnnotationAssertion(Annotation( "ZFA:0001112") Annotation( ) "granulosa cell layers") AnnotationAssertion( "UBERON:0005170") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "granulosa cell layer") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (hepatic duct) AnnotationAssertion(Annotation( ) "Any portion of the ducts that carry bile from the liver to the common bile duct. This may include both intrahapetic components (parts of left and right hepatic ducts) and extrahapetic components (common hepatic duct, plus hilar portion).") AnnotationAssertion( "TODO - MA distinguishes between bile duct, hepatic duct, common bile duct and common hepatic duct. in FMA hepatic duct and common hepatic duct are the same") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0001100") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "A duct that carries bile from the liver to the small intestine.[TAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000219") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( ) "The excretory duct of the liver or one of its branches in the lobes of the liver. [TFD][VHOG]") AnnotationAssertion(Annotation( "GO:0061011") "The hepatic duct is the duct that leads from the liver to the bile duct[GO].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0000741") AnnotationAssertion( "EHDAA:3049") AnnotationAssertion( "EMAPA:16843") AnnotationAssertion( "FMA:71891") AnnotationAssertion( "MA:0000357") AnnotationAssertion( "NCIT:C32730") AnnotationAssertion( "OpenCyc:Mx4rvWo8WJwpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Hepatic_Duct") "UMLS:C0917710") AnnotationAssertion( "VHOG:0000219") AnnotationAssertion( "galen:HepaticDuct") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005171") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "hepatic duct") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (abdomen element) AnnotationAssertion(Annotation( ) "An organ or element that is in the abdomen. Examples: spleen, intestine, kidney, abdominal mammary gland.") AnnotationAssertion( ) AnnotationAssertion( "MA:0000522") AnnotationAssertion(Annotation( "MA:0000522") "abdomen organ") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005172") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "abdomen element") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (abdominal segment element) AnnotationAssertion(Annotation( ) "An organ or element that is part of the adbominal segment of the organism. This region can be further subdivided into the abdominal cavity and the pelvic region.") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37062") AnnotationAssertion( "MA:0000529") AnnotationAssertion(Annotation( "MA:0000529") "abdominal segment organ") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005173") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "abdominal segment element") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (dorsal region element) AnnotationAssertion(Annotation( ) "An organ or element that part of the dorsum of the organism. Examples: spinal cord, vertebrae, muscles of back.") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37274") AnnotationAssertion( "MA:0001901") AnnotationAssertion(Annotation( "MA:0001901") "back organ") AnnotationAssertion( "dorsal region organ") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005174") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "dorsal region element") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (chest organ) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An organ that is part of a chest [Automatically generated definition].") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37272") AnnotationAssertion( "MA:0000552") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005175") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "chest organ") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (tooth enamel organ) AnnotationAssertion(Annotation( ) Annotation( ) Annotation( ) Annotation( "ISBN:0-683-40008-8"^^xsd:string) Annotation( "MP:0010747") "A circumscribed mass of ectodermal cells which bud off from the dental lamina; it becomes cup-shaped and develops on its internal face the ameloblast layer of cells that produces the enamel cap of a developing tooth.") AnnotationAssertion( ) AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0005138") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "A structure that is involved in tooth formation. A bell shape two layer epithelial structure that descends toward the ceratobranchial 5 bone, enclosing the dental mesenchyme. At later times in tooth development the cells at the apex of the bell may be involved in enameloid formation. This structure remains at the base of the erupted tooth and is the source of replacement teeth.[TAO]") AnnotationAssertion( "NOT develops_from NC[https://github.com/obophenotype/uberon/wiki/The-neural-crest]") AnnotationAssertion( "Historically, enamel organ has been the term to describe this structure, but it was attempted unsuccessfully in recent years to change the name to dental organ in order to better represent its multiple functions apart from enamel formation") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0001722") AnnotationAssertion( "CALOHA:TS-0271") AnnotationAssertion( "EMAPA:32888") AnnotationAssertion( "FMA:312389") AnnotationAssertion( "MA:0001604") AnnotationAssertion( "MESH:A14.254.900.720.265") AnnotationAssertion( "TAO:0005138") AnnotationAssertion( "ZFA:0005138") AnnotationAssertion(Annotation( "ZFA:0005138") "dental organ") AnnotationAssertion(Annotation( "MP:0010747") "enamel organ") AnnotationAssertion( "uberon") AnnotationAssertion( "odontogenic organ") AnnotationAssertion(Annotation( ) Annotation( ) "organum enameleum") AnnotationAssertion( "UBERON:0005176") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:comment ". Alternate definition: A cellular aggregation seen in histologic sections of a developing tooth. It lies above a condensation of ectomesenchymal cells called the odontogenic papilla.") AnnotationAssertion(rdfs:label "tooth enamel organ") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (trunk region element) AnnotationAssertion(Annotation( ) "An organ or element that part of the trunk region. The trunk region can be further subdividied into thoracic (including chest and thoracic cavity) and abdominal (including abdomen and pelbis) regions.") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37270") AnnotationAssertion( "MA:0000516") AnnotationAssertion(Annotation( "MA:0000516") "trunk organ") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005177") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "trunk region element") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (thoracic cavity element) AnnotationAssertion(Annotation( ) "An organ or element that is in the thoracic cavity. Examples: lung, heart, longus colli.") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37273") AnnotationAssertion( "MA:0000557") AnnotationAssertion(Annotation( "MA:0000557") "thoracic cavity organ") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005178") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "thoracic cavity element") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pelvic region element) AnnotationAssertion(Annotation( ) "An organ or element that is part of the pelvic region. Examples: reproductive organs (in some organisms), urinary bladder, bones of the pelvis.") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37275") AnnotationAssertion( "MA:0000543") AnnotationAssertion( "pelvic element") AnnotationAssertion(Annotation( "MA:0000543") "pelvis organ") AnnotationAssertion( "pelvis region organ") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005179") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "pelvic region element") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete lymph organ) AnnotationAssertion( "MA:0000747") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005180") AnnotationAssertion(rdfs:label "obsolete lymph organ") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (thoracic segment organ) AnnotationAssertion(Annotation( ) "An organ that part of the thoracic segment region. This region can be further subdividied chest and thoracic cavity regions.") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37271") AnnotationAssertion( "MA:0000563") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "MA:0000563") "upper body organ") AnnotationAssertion( "UBERON:0005181") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "thoracic segment organ") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (hair medulla) AnnotationAssertion(Annotation( ) "Innermost layer of the hair shaft.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0004671") AnnotationAssertion( "EMAPA:35389") AnnotationAssertion( "MA:0000158") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0004671") "medulla of hair shaft") AnnotationAssertion( "UBERON:0005184") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "hair medulla") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (renal medulla collecting duct) AnnotationAssertion(Annotation( ) "The portion of the collecting duct that resides in the renal medulla.") AnnotationAssertion( "BTO:0004536") AnnotationAssertion( "EMAPA:28061") AnnotationAssertion( "EMAPA:35459") AnnotationAssertion( "MA:0002935") AnnotationAssertion(Annotation( "MA:0002935") "kidney medulla collecting duct") AnnotationAssertion(Annotation( "EMAPA:28061") "medullary collecting duct") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005185") AnnotationAssertion(rdfs:label "renal medulla collecting duct") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete caput epididymis) AnnotationAssertion( "UBERON:0004358") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005188") AnnotationAssertion(rdfs:label "obsolete caput epididymis") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete corpus epididymis) AnnotationAssertion( "UBERON:0004359") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005189") AnnotationAssertion(rdfs:label "obsolete corpus epididymis") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete cauda epididymis) AnnotationAssertion( "UBERON:0004360") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005190") AnnotationAssertion(rdfs:label "obsolete cauda epididymis") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete cervical artery) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An artery that is part of a uterine cervix [Automatically generated definition].") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005191") AnnotationAssertion(rdfs:label "obsolete cervical artery") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (deferent duct artery) AnnotationAssertion(Annotation( ) "An artery in males that provides blood to the vas deferens. The artery usually arises from the anterior trunk of the superior vesical artery. It accompanies the vas deferens into the testis, where it anastomoses with the testicular artery. In this way it also supplies blood to the testis and epididymis. A small branch supplies the ureter[WP].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37513") AnnotationAssertion( "FMA:18930") AnnotationAssertion( "MA:0001940") AnnotationAssertion(Annotation( ) Annotation( ) "arteria ductus deferentis") AnnotationAssertion(Annotation( "FMA:18930") "artery of ductus deferens") AnnotationAssertion(Annotation( "FMA:18930") "ductus deferens artery") AnnotationAssertion( "vas deferens artery") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005192") AnnotationAssertion(rdfs:label "deferent duct artery") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "Wikipedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (ethmoidal artery) AnnotationAssertion(Annotation( ) "One of: anterior or posterior ethmoidal arteries.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37081") AnnotationAssertion( "MA:0001949") AnnotationAssertion( "NCIT:C52855") AnnotationAssertion(Annotation( "ncithesaurus:Ethmoidal_Artery") "UMLS:C0226184") AnnotationAssertion( "ethmoid artery") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005193") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "ethmoidal artery") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA-abduced") ObjectSomeValuesFrom( )) # Class: (thoracic vein) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A vein that is part of a thorax [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37197") AnnotationAssertion( "MA:0002235") AnnotationAssertion( "NCIT:C53142") AnnotationAssertion(Annotation( "ncithesaurus:Thoracic_Vein") "UMLS:C0226629") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005194") AnnotationAssertion(rdfs:label "thoracic vein") SubClassOf( ) SubClassOf( ) # Class: (deferent duct vein) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A vein that is part of a vas deferens [Automatically generated definition].") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37514") AnnotationAssertion( "MA:0002100") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005195") AnnotationAssertion(rdfs:label "deferent duct vein") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (spleen germinal center) AnnotationAssertion(Annotation( ) Annotation( "CL:tm") "A germinal center that is part of the spleen. The spleen germinal center is located in a secondary B follicle in the white pulp of the spleen.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:35803") AnnotationAssertion( "MA:0000764") AnnotationAssertion( "NCIT:C49760") AnnotationAssertion(Annotation( "ncithesaurus:Spleen_Germinal_Center") "UMLS:C1710156") AnnotationAssertion( "germinal center of spleen") AnnotationAssertion(Annotation( "MP:0008474") "spleen GC") AnnotationAssertion(Annotation( "MP:0008474") "spleen follicle center") AnnotationAssertion(Annotation( "MP:0008474") "splenic germinal center") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005196") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "spleen germinal center") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "CL:tm") ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (segmental spinal nerve) AnnotationAssertion( "TODO - check") AnnotationAssertion( "EHDAA:3778") AnnotationAssertion( "EMAPA:16990") AnnotationAssertion( "EMAPA:25149") AnnotationAssertion( "MA:0000234") AnnotationAssertion( "VHOG:0000920") AnnotationAssertion(Annotation( "EHDAA2:0001822") "cervical segmental spinal nerves C1-7") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005197") AnnotationAssertion(rdfs:label "segmental spinal nerve") SubClassOf(Annotation( "MA"^^xsd:string) ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (obsolete coat hair bulb) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005198") AnnotationAssertion(rdfs:label "obsolete coat hair bulb") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (cervical mammary gland) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A mammary gland that is part of a cervical region.") AnnotationAssertion( "mice have a single pair of cervical mammary glands") AnnotationAssertion( "MA:0000789") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005199") AnnotationAssertion(rdfs:label "cervical mammary gland") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (thoracic mammary gland) AnnotationAssertion(Annotation( ) Annotation( ) "A lactiferous gland that is located in the thoracic region/breast.") AnnotationAssertion( "Most primates have one pair of mammary glands, which are thoracic.") AnnotationAssertion( ) AnnotationAssertion(Annotation( "FMA:62088") Annotation( ) "lactiferous gland") AnnotationAssertion(Annotation( "FMA:62088") Annotation( ) "mammary gland") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0001056") AnnotationAssertion( "EHDAA:6524") AnnotationAssertion( "EMAPA:36633") AnnotationAssertion( "FMA:62088") AnnotationAssertion( "MA:0000797") AnnotationAssertion( "breast mammary gland") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "anterior mammary gland") AnnotationAssertion( "UBERON:0005200") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "thoracic mammary gland") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "BTO"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (obsolete cervical trunk) AnnotationAssertion( "MA:0001937") AnnotationAssertion( ) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005201") AnnotationAssertion(rdfs:comment "was obsolete as it was defined incorrectly. See Fig97 of The Anatomy of the Laboratory Mouse. May be included in future versions of this ontology that include more detailed relationships and comparisons of the arterial system") AnnotationAssertion(rdfs:label "obsolete cervical trunk") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (distal straight tubule macula densa) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A macula densa that is part of an ascending limb of loop of Henle [Automatically generated definition].") AnnotationAssertion( "TODO - unify terminology - check DST = TAL? Note EMAPA class appears to refer to this segment") AnnotationAssertion( "EMAPA:28399") AnnotationAssertion( "MA:0002604") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005202") AnnotationAssertion(rdfs:label "distal straight tubule macula densa") SubClassOf( ) SubClassOf(Annotation( "MA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "MA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (trachea gland) AnnotationAssertion(Annotation( ) Annotation( ) Annotation( ) Annotation( "ISBN:1451113412") Annotation( "MGI:Anna") "A tubuloacinar seromucous gland that is located principally in the submucosa of the trachea. Excretory ducts from this gland pass through the lamina propria to the tracheal lumen.") AnnotationAssertion( "These glands secrete mucus, lysozyme, defensins, and other agents that help protect the lungs from particles and infectious agents.") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:36574") AnnotationAssertion( "FMA:7473") AnnotationAssertion( "MA:0002937") AnnotationAssertion(Annotation( "FMA:7473") "glandula trachealis") AnnotationAssertion(Annotation( "FMA:7473") "tracheal gland") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:7473") "tubular seromucous gland of trachea") AnnotationAssertion( "UBERON:0005203") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "trachea gland") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (larynx submucosa gland) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A gland that is part of a larynx submucosa [Automatically generated definition].") AnnotationAssertion( "EMAPA:35475") AnnotationAssertion( "MA:0002729") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "EMAPA:35475") "laryngeal submucosa gland") AnnotationAssertion( "UBERON:0005204") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "larynx submucosa gland") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lamina propria of vagina) AnnotationAssertion( "EMAPA:35902") AnnotationAssertion( "FMA:19979") AnnotationAssertion( "MA:0002737") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "MA:0002737") "vagina stroma") AnnotationAssertion( "UBERON:0005205") AnnotationAssertion(rdfs:label "lamina propria of vagina") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (choroid plexus stroma) AnnotationAssertion(Annotation( "PMCID:PMC3496674") "Stromal matrix surrounding blood vessels within the choroid plexus.") AnnotationAssertion( "EMAPA:36609") AnnotationAssertion( "MA:0000825") AnnotationAssertion(Annotation( "PMCID:PMC3496674") "choroid plexus stromal matrix") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005206") AnnotationAssertion(rdfs:label "choroid plexus stroma") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (tonsil capsule) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A capsule that is part of a tonsil [Automatically generated definition].") AnnotationAssertion( "FMA:294647") AnnotationAssertion( "MA:0000776") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005207") AnnotationAssertion(rdfs:label "tonsil capsule") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (right atrium valve) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A valve that is part of a right atrium [Automatically generated definition].") AnnotationAssertion( "EHDAA2:0000302") AnnotationAssertion( "EMAPA:17327") AnnotationAssertion( "MA:0001871") AnnotationAssertion(Annotation( "EMAPA:17327") "valve of right atrium") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "EHDAA2:0000302") Annotation( ) "right atrium valves") AnnotationAssertion(Annotation( "EMAPA:17327") "superior vena cava valve") AnnotationAssertion( "UBERON:0005208") AnnotationAssertion(rdfs:label "right atrium valve") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (renal medulla interstitium) AnnotationAssertion(Annotation( ) "Tissue surrounding the loop of Henle in the renal medulla.") AnnotationAssertion( "It functions in renal water reabsorption by building up a high hypertonicity, which draws water out of the thin descending limb of the loop of Henle and the collecting duct system. This hypertonicity, in turn, is created by an efflux of urea from the inner medullary collecting duct.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:18326") AnnotationAssertion( "MA:0002619") AnnotationAssertion(Annotation( "MA:0002619") "kidney medulla interstitium") AnnotationAssertion( "renal medullary interstitial tissue") AnnotationAssertion(Annotation( "EMAPA:18326") "renal medullary interstitium") AnnotationAssertion(Annotation( ) "medullary interstitium") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "EMAPA:18326") "medullary stroma") AnnotationAssertion( "UBERON:0005211") AnnotationAssertion(rdfs:label "renal medulla interstitium") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "MA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (Leydig cell region of testis) AnnotationAssertion(Annotation( "MESH:A05.360.444.849") "The male gonad containing two functional parts: the SEMINIFEROUS TUBULES for the production and transport of male germ cells (SPERMATOGENESIS) and the interstitial compartment containing LEYDIG CELLS that produce ANDROGENS..") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:18687") AnnotationAssertion( "MA:0002713") AnnotationAssertion(Annotation( ) "interstitium of testis") AnnotationAssertion(Annotation( "EMAPA:18687") "interstitium of the testis") AnnotationAssertion(Annotation( ) "testis - interstitial") AnnotationAssertion(Annotation( "MA:0002713") "testis interstitial tissue") AnnotationAssertion(Annotation( ) "testis interstitium") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005212") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "Leydig cell region of testis") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (outer renal medulla interstitium) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A portion of interstitial tissue that is part of a outer medulla of kidney [Automatically generated definition].") AnnotationAssertion( "EMAPA:28337") AnnotationAssertion( "MA:0002621") AnnotationAssertion(Annotation( "MA:0002621") "kidney outer medulla interstitium") AnnotationAssertion(Annotation( "EMAPA:28337") "outer medullary interstitium") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005213") AnnotationAssertion(rdfs:label "outer renal medulla interstitium") SubClassOf( ) SubClassOf(Annotation( "MA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "MA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (inner renal medulla interstitium) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A portion of interstitial tissue that is part of a inner medulla of kidney [Automatically generated definition].") AnnotationAssertion( "EMAPA:28364") AnnotationAssertion( "MA:0002620") AnnotationAssertion(Annotation( "EMAPA:28364") "inner medullary interstitium") AnnotationAssertion(Annotation( "MA:0002620") "kidney inner medulla interstitium") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "EMAPA:28364") "papillary interstitium") AnnotationAssertion( "UBERON:0005214") AnnotationAssertion(rdfs:label "inner renal medulla interstitium") SubClassOf( ) SubClassOf(Annotation( "MA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "MA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (kidney interstitium) AnnotationAssertion(Annotation( ) Annotation( ) Annotation( ) "The interstitial compartment of the kidney, comprising the extravascular intertubular spaces of the renal parenchyma, with their attendant cellular elements and extracellular substances, bounded on all sides by epithelial and vascular basement membranes.") AnnotationAssertion( "See https://sourceforge.net/p/geneontology/ontology-requests/10941/") AnnotationAssertion( "The interstitium is necessarily involved in all intrarenal exchange processes since the reabsorption and secretion of fluid and solutes implicates a transit across the interstitial compartment.") AnnotationAssertion( "The fibroblasts in the interstitium provide the 'skeleton' of the tissue and maintain the three-dimensional architecture of the tissue.") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:28518") AnnotationAssertion( "FMA:70983") AnnotationAssertion( "MA:0002616") AnnotationAssertion( "NCIT:C33459") AnnotationAssertion( "interstitial tissue of kidney") AnnotationAssertion( "renal interstitial tissue") AnnotationAssertion(Annotation( "FMA:70983") "renal interstitium") AnnotationAssertion(Annotation( "FMA:70983") "renal stroma") AnnotationAssertion(Annotation( "FMA:70983") "stroma of kidney") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "EMAPA:28518") "kidney interstitium group") AnnotationAssertion( "UBERON:0005215") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "kidney interstitium") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (optic eminence surface ectoderm) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An external ectoderm that is part of a optic eminence [Automatically generated definition].") AnnotationAssertion( "EMAPA:16539") AnnotationAssertion( "RETIRED_EHDAA2:0001311") AnnotationAssertion( "VHOG:0000520") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005216") AnnotationAssertion(rdfs:label "optic eminence surface ectoderm") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (midbrain subarachnoid space) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A subarachnoid space that is part of a midbrain [Automatically generated definition].") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001304") Annotation( "VHOG"^^xsd:string) Annotation( ) "Subarachnoid space that is part of the midbrain. [Bgee_curator][VHOG]") AnnotationAssertion( "EMAPA:19055") AnnotationAssertion( "VHOG:0001304") AnnotationAssertion(Annotation( "VHOG:0001304") "subarachnoid space midbrain") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "VHOG:0001304") "subarachnoid space mesencephalon") AnnotationAssertion( "UBERON:0005217") AnnotationAssertion(rdfs:label "midbrain subarachnoid space") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (diencephalon subarachnoid space) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A subarachnoid space that is part of a diencephalon [Automatically generated definition].") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001302") Annotation( "VHOG"^^xsd:string) Annotation( ) "Subarachnoid space that is part of the diencephalon. [Bgee_curator][VHOG]") AnnotationAssertion( "EMAPA:19053") AnnotationAssertion( "VHOG:0001302") AnnotationAssertion(Annotation( "VHOG:0001302") "subarachnoid space diencephalon") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005218") AnnotationAssertion(rdfs:label "diencephalon subarachnoid space") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (hindbrain subarachnoid space) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A subarachnoid space that is part of a hindbrain [Automatically generated definition].") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001303") Annotation( "VHOG"^^xsd:string) Annotation( ) "Subarachnoid space that is part of the hindbrain. [Bgee_curator][VHOG]") AnnotationAssertion( "EMAPA:18211") AnnotationAssertion( "VHOG:0001303") AnnotationAssertion(Annotation( "VHOG:0001303") "subarachnoid space hindbrain") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "VHOG:0001303") "subarachnoid space rhombencephalon") AnnotationAssertion( "UBERON:0005219") AnnotationAssertion(rdfs:label "hindbrain subarachnoid space") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pancreas head parenchyma) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A parenchyma that is part of a head of pancreas [Automatically generated definition].") AnnotationAssertion( "EMAPA:17508") AnnotationAssertion( "VHOG:0000838") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005220") AnnotationAssertion(rdfs:label "pancreas head parenchyma") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (liver right lobe parenchyma) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A parenchyma that is part of a right lobe of liver [Automatically generated definition].") AnnotationAssertion( "EHDAA2:0001010") AnnotationAssertion( "EMAPA:18317") AnnotationAssertion( "FMA:71657") AnnotationAssertion( "VHOG:0000840") AnnotationAssertion(Annotation( "FMA:71657") "parenchyma of right lobe of liver") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005221") AnnotationAssertion(rdfs:label "liver right lobe parenchyma") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (liver left lobe parenchyma) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A parenchyma that is part of a left lobe of liver [Automatically generated definition].") AnnotationAssertion( "EHDAA2:0001002") AnnotationAssertion( "EMAPA:18310") AnnotationAssertion( "FMA:71658") AnnotationAssertion( "VHOG:0000839") AnnotationAssertion(Annotation( "FMA:71658") "parenchyma of left lobe of liver") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005222") AnnotationAssertion(rdfs:label "liver left lobe parenchyma") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pancreas body parenchyma) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A parenchyma that is part of a body of pancreas [Automatically generated definition].") AnnotationAssertion( "EHDAA2:0001370") AnnotationAssertion( "EMAPA:17506") AnnotationAssertion( "VHOG:0000837") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005223") AnnotationAssertion(rdfs:label "pancreas body parenchyma") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pancreas tail parenchyma) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A parenchyma that is part of a tail of pancreas [Automatically generated definition].") AnnotationAssertion( "EHDAA2:0001392") AnnotationAssertion( "EMAPA:17513") AnnotationAssertion( "VHOG:0000469") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005224") AnnotationAssertion(rdfs:label "pancreas tail parenchyma") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (upper leg epithelium) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An epithelium that is part of a hindlimb stylopod [Automatically generated definition].") AnnotationAssertion( "EHDAA2:0002131") AnnotationAssertion( "EMAPA:17500") AnnotationAssertion( "VHOG:0001041") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005225") AnnotationAssertion(rdfs:label "upper leg epithelium") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (pedal digit epithelium) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An epithelium that is part of a toe [Automatically generated definition].") AnnotationAssertion( "EMAPA:32946") AnnotationAssertion( "VHOG:0001031") AnnotationAssertion(Annotation( "OBOL:accepted"^^xsd:string) "hind limb digit epithelium") AnnotationAssertion( "toe epithelium") AnnotationAssertion(Annotation( "NCBITaxon:9606"^^xsd:string) Annotation( "OBOL:accepted"^^xsd:string) Annotation( ) "foot digit epithelium") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005226") AnnotationAssertion(rdfs:label "pedal digit epithelium") SubClassOf(Annotation( "EHDAA2"^^xsd:string) ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (manual digit epithelium) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An epithelium that is part of a finger [Automatically generated definition].") AnnotationAssertion( "EHDAA2:0000406") AnnotationAssertion( "EMAPA:32647") AnnotationAssertion( "VHOG:0001032") AnnotationAssertion( "finger epithelium") AnnotationAssertion(Annotation( "OBOL:accepted"^^xsd:string) "fore limb digit epithelium") AnnotationAssertion(Annotation( "NCBITaxon:9606"^^xsd:string) Annotation( "OBOL:accepted"^^xsd:string) Annotation( ) "hand digit epithelium") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005227") AnnotationAssertion(rdfs:label "manual digit epithelium") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (upper arm epithelium) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An epithelium that is part of a forelimb stylopod [Automatically generated definition].") AnnotationAssertion( "EHDAA2:0002113") AnnotationAssertion( "EMAPA:17425") AnnotationAssertion( "VHOG:0000990") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005228") AnnotationAssertion(rdfs:label "upper arm epithelium") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (lower leg epithelium) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An epithelium that is part of a lower leg [Automatically generated definition].") AnnotationAssertion( "EHDAA2:0001031") AnnotationAssertion( "EMAPA:17497") AnnotationAssertion( "VHOG:0001050") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005229") AnnotationAssertion(rdfs:label "lower leg epithelium") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (obsolete fundus epithelium) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005230") AnnotationAssertion(rdfs:comment "obsoleted due to confusion between ocular fundus and other types of fundus") AnnotationAssertion(rdfs:label "obsolete fundus epithelium") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (medial-nasal process ectoderm) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An ectoderm that is part of a medial nasal prominence [Automatically generated definition].") AnnotationAssertion( "EHDAA2:0001078") AnnotationAssertion( "EMAPA:16809") AnnotationAssertion( "FMA:312675") AnnotationAssertion( "VHOG:0000803") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005233") AnnotationAssertion(rdfs:label "medial-nasal process ectoderm") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (optic eminence ectoderm) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An ectoderm that is part of a optic eminence [Automatically generated definition].") AnnotationAssertion( "EHDAA:940") AnnotationAssertion( "EMAPA:16539") AnnotationAssertion( "RETIRED_EHDAA2:0001309") AnnotationAssertion( "VHOG:0001105") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005234") AnnotationAssertion(rdfs:label "optic eminence ectoderm") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (osseus labyrinth vestibule) AnnotationAssertion(Annotation( ) Annotation( "BTO:0003382") "A small, oval, bony chamber of the labyrinth. The vestibule contains the utricle and saccule, organs which are part of the balancing apparatus of the ear.") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001220") Annotation( "VHOG"^^xsd:string) Annotation( ) "The vestibule is the central part of the osseous labyrinth, and is situated medial to the tympanic cavity, behind the cochlea, and in front of the semicircular canals. [Wikipedia:Vestibule_of_the_ear][VHOG]") AnnotationAssertion(Annotation( "MP:0000034") Annotation( "XAO:0000199") "vestibule") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0003382") AnnotationAssertion( "CALOHA:TS-0479") AnnotationAssertion( "EV:0100366") AnnotationAssertion( "FMA:60183") AnnotationAssertion( "GAID:881") AnnotationAssertion( "MA:0001185") AnnotationAssertion( "MESH:D014722") AnnotationAssertion( "NCIT:C33873") AnnotationAssertion(Annotation( "ncithesaurus:Vestibule") "UMLS:C0458718") AnnotationAssertion( "VHOG:0001220") AnnotationAssertion( "XAO:0000199") AnnotationAssertion( "bony labyrinth vestibule") AnnotationAssertion(Annotation( "BTO:0003382") "inner ear vestibulum") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "osseous labyrinth vestibule") AnnotationAssertion(Annotation( "FMA:60183") "vestibule of bony labyrinth") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0003382") "inner ear vestibule") AnnotationAssertion(Annotation( "GAID:881") "vestibular apparatus") AnnotationAssertion(Annotation( "FMA:60183") "vestibular part of bony labyrinth") AnnotationAssertion(Annotation( ) Annotation( ) "vestibulum auris") AnnotationAssertion(Annotation( ) Annotation( ) "vestibulum labyrinthi") AnnotationAssertion( "UBERON:0005236") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "osseus labyrinth vestibule") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/5/5f/Gray919.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (basal plate metencephalon) AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000320") Annotation( "VHOG"^^xsd:string) Annotation( ) "The ventral half of the developing neural tube that is the metencephalon. [Chordate_evolution_and_the_origin_of_craniates:_An_old_brain_in_a_new_head._AnaT_Rec_(New_Anat)_(2000)_261(3):_111-125, See_Butler_AB][VHOG]") AnnotationAssertion( "EHDAA2:0001154") AnnotationAssertion( "EMAPA:17078") AnnotationAssertion( "VHOG:0000320") AnnotationAssertion(Annotation( "EHDAA2:0001154") "metencephalon basal plate") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005239") AnnotationAssertion(rdfs:label "basal plate metencephalon") SubClassOf( ) # Class: (basal plate medulla oblongata) AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000324") Annotation( "VHOG"^^xsd:string) Annotation( ) "The ventral half of the developing neural tube that is the medulla oblongata. [Chordate_evolution_and_the_origin_of_craniates:_An_old_brain_in_a_new_head._AnaT_Rec_(New_Anat)_(2000)_261(3):_111-125, See_Butler_AB][VHOG]") AnnotationAssertion( "EHDAA2:0001093") AnnotationAssertion( "EMAPA:17557") AnnotationAssertion( "VHOG:0000324") AnnotationAssertion(Annotation( "EHDAA2:0001093") "medulla oblongata basal plate") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005240") AnnotationAssertion(rdfs:label "basal plate medulla oblongata") SubClassOf( ) # Class: (obsolete apical ectodermal ridge forelimb) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A forelimb that is part of an apical ectodermal ridge [Automatically generated definition].") AnnotationAssertion( "VHOG:0001064") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005241") AnnotationAssertion(rdfs:label "obsolete apical ectodermal ridge forelimb") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete apical ectodermal ridge hindlimb) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A hindlimb that is part of an apical ectodermal ridge [Automatically generated definition].") AnnotationAssertion( "VHOG:0001066") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005242") AnnotationAssertion(rdfs:label "obsolete apical ectodermal ridge hindlimb") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (interventricular septum endocardium) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An endocardium that is part of a interventricular septum [Automatically generated definition].") AnnotationAssertion( "TODO - split?") AnnotationAssertion( "EHDAA2:0000886") AnnotationAssertion( "EHDAA2:0000887") AnnotationAssertion( "FMA:83584") AnnotationAssertion( "VHOG:0000615") AnnotationAssertion(Annotation( "FMA:83584") "endocardium of interventricular septum") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "VHOG:0000615") "interventricular septum endocardial tissue") AnnotationAssertion( "UBERON:0005243") AnnotationAssertion(rdfs:label "interventricular septum endocardium") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lobar bronchus of right lung cranial lobe) AnnotationAssertion( "UBERON:0012060") AnnotationAssertion(Annotation( "EMAPA:17992") "lobar bronchus of cranial lobe") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0001752") AnnotationAssertion( "EMAPA:17992") AnnotationAssertion( "FMA:7397") AnnotationAssertion( "VHOG:0000240") AnnotationAssertion(Annotation( "EHDAA2:0001752") "right lung cranial lobe lobar bronchus") AnnotationAssertion(Annotation( "FMA:7397") "right superior lobar bronchus") AnnotationAssertion(Annotation( "FMA:7397") "right upper lobar bronchus") AnnotationAssertion(Annotation( "FMA:7397") "right upper lobe bronchus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "eparterial bronchus") AnnotationAssertion( "UBERON:0005244") AnnotationAssertion(rdfs:label "lobar bronchus of right lung cranial lobe") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lobar bronchus of right lung caudal lobe) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A lobar bronchus that is part of a lower lobe of right lung [Automatically generated definition].") AnnotationAssertion( "EHDAA2:0001744") AnnotationAssertion( "EMAPA:17987") AnnotationAssertion( "VHOG:0000250") AnnotationAssertion(Annotation( "EMAPA:17987") "lobar bronchus of caudal lobe") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005245") AnnotationAssertion(rdfs:label "lobar bronchus of right lung caudal lobe") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (bulbus cordis myocardium) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A myocardium that is part of a bulbus cordis [Automatically generated definition].") AnnotationAssertion( "EMAPA:36488") AnnotationAssertion( "VHOG:0000609") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "VHOG:0000609") "bulbus cordis cardiac muscle") AnnotationAssertion( "UBERON:0005248") AnnotationAssertion(rdfs:label "bulbus cordis myocardium") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (metanephric renal pelvis) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A renal pelvis that is part of a metanephros.") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000945") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0030223693 Liem KF, Bemis WE, Walker WF, Grande L, Functional Anatomy of the Vertebrates: An Evolutionary Perspective (2001) p.639") "The ureteric bud itself forms the collecting tubules and the ureter that drain the adult kidney. This type of kidney, called the metanephros, occurs in all adult amniotes.[well established][VHOG]") AnnotationAssertion( "VHOG:0000945") AnnotationAssertion(Annotation( "VHOG:0000945") "metanephros pelvis") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005249") AnnotationAssertion(rdfs:label "metanephric renal pelvis") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (stomatodeum gland) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A gland that is part of a stomodeum.") AnnotationAssertion( "check this") AnnotationAssertion( "VHOG:0000658") AnnotationAssertion(Annotation( "VHOG:0000658") "stomatodaeum gland") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005250") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "stomatodeum gland") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (yolk sac cavity) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An anatomical cavity that is part of a yolk sac [Automatically generated definition].") AnnotationAssertion(Annotation( "ISBN:0073040584"^^xsd:string) "In mammals, the yolk sac cavity contains fluid rather than platelets") AnnotationAssertion(Annotation( "EHDAA2"^^xsd:string) "in EHDAA2, there are separate primary and secondary yolk sac cavities") AnnotationAssertion( "EMAPA:16055") AnnotationAssertion( "FMA:63942") AnnotationAssertion( "VHOG:0000843") AnnotationAssertion(Annotation( "FMA:63942") "cavity of yolk sac") AnnotationAssertion( "yolk sac lumen") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:63942") "yolk sac space") AnnotationAssertion( "UBERON:0005251") AnnotationAssertion(rdfs:label "yolk sac cavity") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lesser sac cavity) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An anatomical cavity that is part of a lesser sac [Automatically generated definition].") AnnotationAssertion( "EHDAA2:0004558") AnnotationAssertion( "EMAPA:18461") AnnotationAssertion( "FMA:9702") AnnotationAssertion( "VHOG:0000827") AnnotationAssertion(Annotation( "FMA:9702") "cavity of lesser sac") AnnotationAssertion(Annotation( "FMA:9702") "cavity of omental bursa") AnnotationAssertion(Annotation( "FMA:9702") "cavity of omental bursa viewed anatomically") AnnotationAssertion(Annotation( "FMA:9702") "lesser peritoneal sac") AnnotationAssertion(Annotation( "FMA:9702") "lesser sac cavity") AnnotationAssertion(Annotation( "EMAPA:18461") "omental bursa cavity") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005252") AnnotationAssertion(rdfs:label "lesser sac cavity") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (head mesenchyme) AnnotationAssertion(Annotation( "ISBN:0683400088") Annotation( "MP:0011260") "Portion of primordial embryonic connective tissue of the developing head, consisting of mesenchymal cells supported in interlaminar jelly, that derive mostly from the mesoderm and contribute to head connective tissue, bone and musculature in conjunction with cranial neural crest cells.") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0000113") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "Mesoderm that will give rise, along with cranial neural crest cells, to connective tissue, bone and musculature in the head. (Source: BioGlossary, www.Biology-Text.com)[TAO]") AnnotationAssertion( "EFO:0003492") AnnotationAssertion( "EHDAA2:0000732") AnnotationAssertion( "EHDAA:179") AnnotationAssertion( "EMAPA:16098") AnnotationAssertion( "EMAPA_RETIRED:16269") AnnotationAssertion( "FMA:76622") AnnotationAssertion( "TAO:0000113") AnnotationAssertion( "VHOG:0000332") AnnotationAssertion( "ZFA:0000113") AnnotationAssertion(Annotation( "MP:0011260") "cephalic mesenchyme") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "MGI:anna"^^xsd:string) "cranial mesenchyme") AnnotationAssertion(Annotation( "FMA:76622") Annotation( ) "desmocranium") AnnotationAssertion( "UBERON:0005253") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "head mesenchyme") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (upper leg mesenchyme) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "Mesenchyme that is part of a developing hindlimb stylopod [Automatically generated definition].") AnnotationAssertion( "EHDAA2:0002132") AnnotationAssertion( "EMAPA:17501") AnnotationAssertion( "VHOG:0000506") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005254") AnnotationAssertion(rdfs:label "upper leg mesenchyme") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pedal digit mesenchyme) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "Mesenchyme that is part of a developing toe [Automatically generated definition].") AnnotationAssertion( "EMAPA:32947") AnnotationAssertion( "VHOG:0000463") AnnotationAssertion(Annotation( "OBOL:accepted"^^xsd:string) "hind limb digit mesenchyme") AnnotationAssertion( "toe mesenchyme") AnnotationAssertion(Annotation( "NCBITaxon:9606"^^xsd:string) Annotation( "OBOL:accepted"^^xsd:string) Annotation( ) "foot digit mesenchyme") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "finger ray mesenchyme") AnnotationAssertion(Annotation( ) "pedal digital ray mesenchyme") AnnotationAssertion( "UBERON:0005255") AnnotationAssertion(rdfs:label "pedal digit mesenchyme") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (trunk mesenchyme) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "Mesenchyme that is part of a developing trunk.") AnnotationAssertion( "EFO:0003485") AnnotationAssertion( "EHDAA2:0002092") AnnotationAssertion( "EHDAA:377") AnnotationAssertion( "EMAPA:16177") AnnotationAssertion( "TAO:0000081") AnnotationAssertion( "VHOG:0000281") AnnotationAssertion( "ZFA:0000081") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "EHDAA2:0002092") "trunk and cervical mesenchyme") AnnotationAssertion( "UBERON:0005256") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "trunk mesenchyme") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (manual digit mesenchyme) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "Mesenchyme that is part of a developing finger [Automatically generated definition].") AnnotationAssertion( "In EHDAA2, the metacarpal cartilage condensation is considered part of the digits - it might be better to call the whole structure digital ray mesenchyme/condensation") AnnotationAssertion( "EHDAA2:0000407") AnnotationAssertion( "EMAPA:32645") AnnotationAssertion( "VHOG:0001416") AnnotationAssertion( "finger mesenchyme") AnnotationAssertion(Annotation( "OBOL:accepted"^^xsd:string) "fore limb digit mesenchyme") AnnotationAssertion(Annotation( "NCBITaxon:9606"^^xsd:string) Annotation( "OBOL:accepted"^^xsd:string) Annotation( ) "hand digit mesenchyme") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "anterior limb digital ray mesenchyme") AnnotationAssertion(Annotation( ) "finger ray mesenchyme") AnnotationAssertion(Annotation( ) "manual digital ray mesenchyme") AnnotationAssertion( "UBERON:0005257") AnnotationAssertion(rdfs:label "manual digit mesenchyme") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (upper arm mesenchyme) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "Mesenchyme that is part of a developing forelimb stylopod [Automatically generated definition].") AnnotationAssertion( "EHDAA2:0002114") AnnotationAssertion( "EMAPA:17426") AnnotationAssertion( "VHOG:0000505") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005258") AnnotationAssertion(rdfs:label "upper arm mesenchyme") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lower leg mesenchyme) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "Mesenchyme that is part of a developing lower leg [Automatically generated definition].") AnnotationAssertion( "EHDAA2:0001032") AnnotationAssertion( "EMAPA:17498") AnnotationAssertion( "VHOG:0000752") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005259") AnnotationAssertion(rdfs:label "lower leg mesenchyme") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (atrium cardiac jelly) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A cardiac jelly that is part of an atrium [Automatically generated definition].") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000941") Annotation( "VHOG"^^xsd:string) Annotation( ) "Cardiac jelly that is part of the atrium. [Bgee_curator][VHOG]") AnnotationAssertion( "EMAPA:16343") AnnotationAssertion( "EMAPA:16814") AnnotationAssertion( "EMAPA:16821") AnnotationAssertion( "VHOG:0000941") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005261") AnnotationAssertion(rdfs:label "atrium cardiac jelly") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (ventricle cardiac jelly) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A cardiac jelly that is part of a ventricle [Automatically generated definition].") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000943") Annotation( "VHOG"^^xsd:string) Annotation( ) "Cardiac jelly that is part of the ventricle. [Bgee_curator][VHOG]") AnnotationAssertion( "VHOG:0000943") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005262") AnnotationAssertion(rdfs:label "ventricle cardiac jelly") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (outflow tract cardiac jelly) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A cardiac jelly that is part of a outflow tract [Automatically generated definition].") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000940") Annotation( "VHOG"^^xsd:string) Annotation( ) "Cardiac jelly that is part of the outflow tract. [Bgee_curator][VHOG]") AnnotationAssertion( "EHDAA2:0001354") AnnotationAssertion( "EMAPA:16347") AnnotationAssertion( "VHOG:0000940") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005263") AnnotationAssertion(rdfs:label "outflow tract cardiac jelly") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete midbrain neural fold) AnnotationAssertion( "VHOG:0000793") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005264") AnnotationAssertion(rdfs:label "obsolete midbrain neural fold") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete hindbrain neural fold) AnnotationAssertion( "VHOG:0001211") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005265") AnnotationAssertion(rdfs:label "obsolete hindbrain neural fold") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete spinal cord neural fold) AnnotationAssertion( "VHOG:0000628") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005266") AnnotationAssertion(rdfs:label "obsolete spinal cord neural fold") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (renal cortex artery) AnnotationAssertion(Annotation( ) "An artery that supplies the renal cortex.") AnnotationAssertion( "EMAPA:28147") AnnotationAssertion( "MA:0002582") AnnotationAssertion(Annotation( "MP:0011314") "kidney cortex artery") AnnotationAssertion(Annotation( "MA:0002582") "renal cortex artery") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "MA:0002582") "renal cortex arterial system") AnnotationAssertion( "UBERON:0005268") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "renal cortex artery") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "MA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (renal cortex vein) AnnotationAssertion(Annotation( "MGI:csmith"^^xsd:string) "Artery that receives blood from the renal cortex[MP, modified].") AnnotationAssertion( "EMAPA:28152") AnnotationAssertion( "MA:0002592") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "MP:0011322") "kidney cortex vein") AnnotationAssertion(Annotation( "MA:0002592") "renal cortex venous system") AnnotationAssertion( "UBERON:0005269") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "renal cortex vein") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "MA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (renal cortex interstitium) AnnotationAssertion(Annotation( ) "A compartment of the renal cortex situated between basement membranes of epithelia and vessels that contains two contiguous cellular networks in mutual contact, one formed by interstitial fibroblasts, the other by dendritic cells.") AnnotationAssertion(Annotation( ) "In the renal cortex, interstitial fibroblasts produce erythropoietin and are distinguished from other interstitial cells by their prominent F-actin cytoskeleton, abundance of rough endoplasmic reticulum, and by ecto-5'-nucleotidase expression in their plasma membrane. The resident dendritic cells belong to the mononuclear phagocyte system and fulfil a sentinel function. They are characterized by their expression of MHC class II and CD11c.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:28136") AnnotationAssertion( "MA:0002608") AnnotationAssertion(Annotation( "MA:0002608") "kidney cortex interstitium") AnnotationAssertion( "renal cortical interstitial tissue") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "EMAPA:28136") "cortical stroma") AnnotationAssertion( "UBERON:0005270") AnnotationAssertion(rdfs:label "renal cortex interstitium") SubClassOf( ) SubClassOf(Annotation( "MA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "MA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (juxtamedullary cortex) AnnotationAssertion(Annotation( ) "The part of the renal cortex nearest to the medulla.") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37623") AnnotationAssertion( "FMA:74288") AnnotationAssertion( "KUPO:0001008") AnnotationAssertion( "MA:0001648") AnnotationAssertion(Annotation( "FMA:74288") "inner cortex of kidney") AnnotationAssertion(Annotation( "KUPO:0001008") "inner renal cortex") AnnotationAssertion(Annotation( "FMA:74288") "juxtamedullary cortex of kidney") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005271") AnnotationAssertion(rdfs:label "juxtamedullary cortex") SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) Annotation( "KUPO") ObjectSomeValuesFrom( )) # Class: (peritubular capillary) AnnotationAssertion(Annotation( "MGI:csmith"^^xsd:string) Annotation( "MP:0011321") "The tiny blood vessels that receive blood from the efferent arterioles of the glomerulus, and interact with superficial cortical nephrons allowing reabsorption and secretion between blood and the inner lumen of the nephron; peritubular capillaries are situated around the tubule and are at low pressure.") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:36558") AnnotationAssertion( "MA:0002588") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005272") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "peritubular capillary") SubClassOf( ) # Class: (nail bed) AnnotationAssertion(Annotation( "UBERON:gvg") "Region of skin beneath the nail plate[WP].") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:35581") AnnotationAssertion( "EV:0100158") AnnotationAssertion( "MA:0002706") AnnotationAssertion( "VHOG:0001362") AnnotationAssertion( "nailbed") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005273") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "nail bed") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (proximal nail bed) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37509") AnnotationAssertion( "MA:0002709") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005274") AnnotationAssertion(rdfs:label "proximal nail bed") SubClassOf( ) SubClassOf(Annotation( "MA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (dorsal skin of digit) AnnotationAssertion( "dorsal digit skin") AnnotationAssertion( "skin of dorsal part of digit") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005275") AnnotationAssertion(rdfs:label "dorsal skin of digit") SubClassOf( ) # Class: (dorsal skin of finger) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A dorsal skin of digit that is part of a manual digit.") AnnotationAssertion(Annotation( "FMA"^^xsd:string) "this class is explicitly the union of the two FMA classes") AnnotationAssertion( "FMA:38320") AnnotationAssertion( "FMA:60346") AnnotationAssertion( "dorsal finger skin") AnnotationAssertion(Annotation( "FMA:38320") "skin of dorsal part of finger") AnnotationAssertion(Annotation( "FMA:60346") "subdivision of skin of dorsal part of finger") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005276") AnnotationAssertion(rdfs:label "dorsal skin of finger") SubClassOf( ) SubClassOf( ) # Class: (dorsal skin of toe) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A dorsal skin of digit that is part of a pedal digit.") AnnotationAssertion(Annotation( "FMA"^^xsd:string) "this class is explicitly the union of the two FMA classes") AnnotationAssertion( "FMA:37868") AnnotationAssertion( "FMA:60523") AnnotationAssertion( "dorsal toe skin") AnnotationAssertion(Annotation( "FMA:37868") "skin of dorsal part of toe") AnnotationAssertion(Annotation( "FMA:60523") "subdivision of skin of dorsal part of toe") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005277") AnnotationAssertion(rdfs:label "dorsal skin of toe") SubClassOf( ) SubClassOf( ) # Class: (nail bed of finger) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A nail bed that is part of a manual digit.") AnnotationAssertion( ) AnnotationAssertion( "FMA:60348") AnnotationAssertion(Annotation( "FMA:60348") "nail bed of finger") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005278") AnnotationAssertion(rdfs:label "nail bed of finger") SubClassOf( ) SubClassOf( ) # Class: (nail bed of toe) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A nail bed that is part of a pedal digit.") AnnotationAssertion( ) AnnotationAssertion( "FMA:60529") AnnotationAssertion(Annotation( "FMA:60529") "nail bed of toe") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005279") AnnotationAssertion(rdfs:label "nail bed of toe") SubClassOf( ) SubClassOf( ) # Class: (obsolete head mesoderm) AnnotationAssertion( "UBERON:0006904") AnnotationAssertion( "uberon") AnnotationAssertion( "cranial mesoderm") AnnotationAssertion( "UBERON:0005280") AnnotationAssertion(rdfs:label "obsolete head mesoderm") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (ventricular system of central nervous system) AnnotationAssertion(Annotation( ) "A set of structures containing cerebrospinal fluid in the brain. It is continuous with the central canal of the spinal cord[WP].") AnnotationAssertion( "TODO - resolve space vs structure conflation. We follow FMA in making this and the various ventricles a structure - it follows from this that strutures such as the tela choroidea and choroid plexuses can be part of the ventricles and ventricular system. Note: see also the class 'neuraxis cavity'") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EFO:0003650") AnnotationAssertion( "EHDAA2:0004362") AnnotationAssertion( "EV:0100306") AnnotationAssertion( "FMA:242675") AnnotationAssertion( "MBA:73") AnnotationAssertion( "TAO:0001261") AnnotationAssertion( "ZFA:0001261") AnnotationAssertion(Annotation( "EHDAA2:0004362") "CNS ventricular system") AnnotationAssertion(Annotation( "ZFA:0001261") "ventricular system") AnnotationAssertion(Annotation( "FMA:242675") "ventricular system of neuraxis") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "ventricle system") AnnotationAssertion(Annotation( ) Annotation( ) "ventriculi cerebri") AnnotationAssertion( "UBERON:0005281") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "ventricular system of central nervous system") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/7/7d/Gray734.png"^^xsd:anyURI) SubClassOf(Annotation( "ZFA"^^xsd:string) ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (ventricular system of brain) AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000005") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0878932504 Gilbert SF, Developmental Biology (2006) p.381-382, ISBN:978-0030223693 Liem KF, Bemis WE, Walker WF, Grande L, Functional Anatomy of the Vertebrates: An Evolutionary Perspective (2001) p.500") "The early development of most vertebrate brains is similar (...). The zebrafish neural tube follows the same basic differentiation pattern as the mammalian neural tube (reference 1); The brain develops from three embryonic enlargements of the neural tube, which later differentiate into five regions. A forebrain differentiates into telencephalon and diencephalon. The midbrain, or mesencephalon, remains undivided. The hindbrain divides into the metencephalon and myelencephalon. Cavities within the brain enlarge to form a series of interconnected ventricles (reference 2).[well established][VHOG]") AnnotationAssertion( "CALOHA:TS-1295") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37447") AnnotationAssertion( "FMA:242787") AnnotationAssertion( "VHOG:0000005") AnnotationAssertion(Annotation( "VHOG:0000005") "brain ventricular system") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005282") AnnotationAssertion(rdfs:label "ventricular system of brain") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (tela choroidea) AnnotationAssertion(Annotation( ) Annotation( ) Annotation( "ISBN:0471888893"^^xsd:string) "A structure found in the walls of the ventricles of the brain, consisting of part of the meninges (pia mater in mammals) plus ependyma[cjm].") AnnotationAssertion(Annotation( "ZFA:0000447") "Portion of tissue that is part of the primitive meninx which forms a fold, roofing a ventricle of the brain and supporting the choroid plexus[ZFA:0000447].") AnnotationAssertion( "Vascularized tela choroidea is choroid plexus.") AnnotationAssertion(Annotation( "ZFA"^^xsd:string) "Note that the structure in ZFA may be different") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:242849") AnnotationAssertion( "TAO:0000447") AnnotationAssertion( "ZFA:0000447") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:242849") "tela chorioidea") AnnotationAssertion( "UBERON:0005283") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "tela choroidea") SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (tela choroidea of midbrain cerebral aqueduct) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Tela choroidea that lines the tectal ventricle.") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0005157") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "Tela chorioidea that lines the tectal ventricle.[TAO]") AnnotationAssertion( "TAO:0005157") AnnotationAssertion( "ZFA:0005157") AnnotationAssertion(Annotation( "ZFA:0005157") "tela chorioidea tectal ventricle") AnnotationAssertion(Annotation( ) "tela choroidea of cerebral aqueduct") AnnotationAssertion(Annotation( "ZFA:0005157") "tela choroidea tectal ventricle") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005286") AnnotationAssertion(rdfs:label "tela choroidea of midbrain cerebral aqueduct") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (tela choroidea of fourth ventricle) AnnotationAssertion(Annotation( ) Annotation( "ZFIN:curator"^^xsd:string) "Tela chorioidea that lines the fourth ventricle[ZFA]. The tela chorioidea of the fourth ventricle is the name applied to the triangular fold of pia mater which is carried upward between the cerebellum and the medulla oblongata. It consists of two layers, which are continuous with each other in front, and are more or less adherent throughout: The posterior layer covers the antero-inferior surface of the cerebellum. The anterior layer is applied to the structures which form the lower part of the roof of the ventricle, and is continuous inferiorly with the pia mater on the inferior peduncles and closed part of the medulla[WP].") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0005158") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "Tela chorioidea that lines the fourth ventricle.[TAO]") AnnotationAssertion(Annotation( "FMA:78493") Annotation( "FMA:TA"^^xsd:string) "tela choroidea") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:tc4v") AnnotationAssertion( "FMA:78493") AnnotationAssertion( "TAO:0005158") AnnotationAssertion( "ZFA:0005158") AnnotationAssertion(Annotation( "FMA:78493") "choroid membrane") AnnotationAssertion(Annotation( "FMA:78493") "choroid membrane of fourth ventricle") AnnotationAssertion( "tela chorioidea fourth ventricle") AnnotationAssertion( "tela choroidea fourth ventricle") AnnotationAssertion( "tela choroidea of fourth ventricle") AnnotationAssertion(Annotation( "FMA:78493") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "tela choroidea ventriculi quarti") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "tela choroidea ventriculi quarti") AnnotationAssertion( "UBERON:0005287") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "tela choroidea of fourth ventricle") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (tela choroidea of third ventricle) AnnotationAssertion(Annotation( ) Annotation( "ZFIN:curator"^^xsd:string) "Tela chorioidea that lines the third ventricle[ZFA]. The part of the choroid plexus in relation to the body of the ventricle forms the vascular fringed margin of a triangular process of pia mater, named the tela chorioidea of the third ventricle, and projects from under cover of the lateral edge of the fornix. Blood is supplied by branches from the superior cerebellar artery[WP].") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0005159") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "Tela chorioidea that lines the third ventricle.[TAO]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:tc3v") AnnotationAssertion( "FMA:78463") AnnotationAssertion( "TAO:0005159") AnnotationAssertion( "ZFA:0005159") AnnotationAssertion(Annotation( "FMA:78463") "choroid membrane of third ventricle") AnnotationAssertion( "tela chorioidea of third ventricle") AnnotationAssertion(Annotation( "ZFA:0005159") "tela chorioidea third ventricle") AnnotationAssertion( "tela choroidea third ventricle") AnnotationAssertion(Annotation( "FMA:78463") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "tela choroidea ventriculi tertii") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "tela choroidea ventriculi tertii") AnnotationAssertion( "UBERON:0005288") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "tela choroidea of third ventricle") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/6/60/Gray723.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (tela choroidea of telencephalic ventricle) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Tela chorioidea that lines the telencephalic ventricle.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:tclv") AnnotationAssertion( "FMA:83712") AnnotationAssertion( "TAO:0005160") AnnotationAssertion( "ZFA:0005160") AnnotationAssertion( "tela chorioidea of lateral ventricle") AnnotationAssertion( "tela chorioidea of telencephalic ventricle") AnnotationAssertion(Annotation( "ZFA:0005160") "tela chorioidea telencephalic ventricle") AnnotationAssertion(Annotation( "FMA:83712") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "tela choroidea (ventriculi lateralis)") AnnotationAssertion(Annotation( "FMA:83712") "tela choroidea of lateral ventricle") AnnotationAssertion( "tela choroidea telencephalic ventricle") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005289") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "tela choroidea of telencephalic ventricle") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (myelencephalon) AnnotationAssertion(Annotation( ) Annotation( "BTO:0000758") "The posterior part of the developing vertebrate hindbrain or the corresponding part of the adult brain composed of the medulla oblongata and a portion of the fourth ventricle; as well as the glossopharyngeal nerve (CN IX), vagus nerve (CN X), accessory nerve (CN XI), hypoglossal nerve (CN XII), and a portion of the vestibulocochlear nerve (CN VIII).[BTO,WP].") AnnotationAssertion( ) AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000456") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( ) "The posterior of the two brain vesicles formed by specialization of the rhombencephalon in the developing embryo, it comprises the medulla oblongata. [TFD][VHOG]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000456") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0878932504 Gilbert SF, Developmental Biology (2006) p.381-382, ISBN:978-0030223693 Liem KF, Bemis WE, Walker WF, Grande L, Functional Anatomy of the Vertebrates: An Evolutionary Perspective (2001) p.500") "The early development of most vertebrate brains is similar (...). The zebrafish neural tube follows the same basic differentiation pattern as the mammalian neural tube (reference 1); The brain develops from three embryonic enlargements of the neural tube, which later differentiate into five regions. A forebrain differentiates into telencephalon and diencephalon. The midbrain, or mesencephalon, remains undivided. The hindbrain divides into the metencephalon and myelencephalon. Cavities within the brain enlarge to form a series of interconnected ventricles (reference 2).[well established][VHOG]") AnnotationAssertion( "the terms metencephalon and myelencephalon are only meaningful in mammals and birds - Neuroanatomy of the Zebrafish Brain. Note that its not clear if this refers to the developing medulla oblongata - MA (adult) has two distinct classes") AnnotationAssertion( ) AnnotationAssertion( "BTO:0000758") AnnotationAssertion( "CALOHA:TS-0607") AnnotationAssertion( "CALOHA:TS-2365") AnnotationAssertion( "DHBA:10662") AnnotationAssertion( "EHDAA2:0001207") AnnotationAssertion( "EHDAA:5526") AnnotationAssertion( "EMAPA:17082") AnnotationAssertion( "HBA:9512") AnnotationAssertion( "MA:0000205") AnnotationAssertion( "VHOG:0000456") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "DHBA:10662") "myelencephalon (medulla oblongata)") AnnotationAssertion( "UBERON:0005290") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "myelencephalon") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/5/54/EmbryonicBrain.svg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "definitional"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (embryonic tissue) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A portion of tissue that is part of an embryo.") AnnotationAssertion( "CALOHA:TS-2100") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "portion of embryonic tissue") AnnotationAssertion( "uberon") AnnotationAssertion( "developing tissue") AnnotationAssertion( "UBERON:0005291") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "embryonic tissue") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (extraembryonic tissue) AnnotationAssertion(Annotation( ) "Portion of tissue that is contiguous with the embryo and is comprised of portions of tissue or cells that will not contribute to the embryo.") AnnotationAssertion( "BTO:0003360") AnnotationAssertion( "CALOHA:TS-2119") AnnotationAssertion( "EFO:0001406") AnnotationAssertion( "MAT:0000061") AnnotationAssertion( "MIAA:0000061") AnnotationAssertion( "extra-embryonic tissue") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005292") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "extraembryonic tissue") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (cerebellum lobe) AnnotationAssertion(Annotation( ) "A major subdivision of the cerebellum: anterior, posterior and flocculonodular.") AnnotationAssertion( ) AnnotationAssertion( "BAMS:CBl") AnnotationAssertion( "BIRNLEX:1076") AnnotationAssertion( "EMAPA:35220") AnnotationAssertion( "FMA:242392") AnnotationAssertion( "MA:0002963") AnnotationAssertion(Annotation( "FMA:242392") "cerebellar lobe") AnnotationAssertion(Annotation( "FMA:242392") "lobe of cerebellum") AnnotationAssertion(Annotation( "BIRNLEX:1076") "lobe parts of the cerebellar cortex") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BAMS:CBl") "cerebellar lobes") AnnotationAssertion( "UBERON:0005293") AnnotationAssertion(rdfs:label "cerebellum lobe") SubClassOf( ) # Class: (gonadal ridge) AnnotationAssertion(Annotation( "MGI:anna"^^xsd:string) Annotation( "MP:0011411") "The elevation of thickened mesothelium and underlying mesenchyme found on the ventromedial border of the embryonic mesonephros in which the primordial germ cells become embedded, establishing it as the primordium of the testis or ovary.") AnnotationAssertion( "TODO - check developmental relationships. merge with urogenital ridge?") AnnotationAssertion( "in eutherians, SRY transforms the indifferent gonad into testes") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0011047") AnnotationAssertion( "BTO:0001402") AnnotationAssertion( "EFO:0001414") AnnotationAssertion( "EHDAA2:0004044") AnnotationAssertion( "EMAPA:35899") AnnotationAssertion( "FMA:321917") AnnotationAssertion( "NCIT:C34184") AnnotationAssertion( "NCIT:C34321") AnnotationAssertion(Annotation( "ncithesaurus:Urogenital_Ridge") "UMLS:C0231047") AnnotationAssertion(Annotation( "ncithesaurus:Gonadal_Ridge") "UMLS:C1512243") AnnotationAssertion( "XAO:0000018") AnnotationAssertion(Annotation( ) Annotation( "MP:0011411") "genital ridge") AnnotationAssertion(Annotation( ) "gonadal ridge") AnnotationAssertion(Annotation( ) "indifferent gonadal ridge") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "crista gonadalis") AnnotationAssertion(Annotation( "MP:0011411") "genital cord") AnnotationAssertion( "UBERON:0005294") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "gonadal ridge") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/3/30/Gray1106.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (sex cord) AnnotationAssertion(Annotation( ) Annotation( ) "Cordlike masses of epithelial tissue that invaginate from germinal epithelium of the gonad and give rise to seminiferous tubules and rete testes in the male, and primary ovarian follicles and rete ovarii in the female.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0004051") AnnotationAssertion( "NCIT:C34183") AnnotationAssertion( "RETIRED_EHDAA2:0001523") AnnotationAssertion(Annotation( "ncithesaurus:Gonadal_Cord") "UMLS:C1512242") AnnotationAssertion( "uberon") AnnotationAssertion( "genital cord") AnnotationAssertion( "gonad cord") AnnotationAssertion( "gonadal cord") AnnotationAssertion( "primitive sex cord") AnnotationAssertion( "UBERON:0005295") AnnotationAssertion(rdfs:label "sex cord") SubClassOf(Annotation( "EHDAA2"^^xsd:string) ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (ovary sex cord) AnnotationAssertion(Annotation( ) "Structures that develop from sex cords in the female. After further development they become the ovarian follicles.") AnnotationAssertion( "TODO check secondary vs cortical vs ovary") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0001363") AnnotationAssertion( "EHDAA:8130") AnnotationAssertion( "EMAPA:31058") AnnotationAssertion( "NCIT:C34134") AnnotationAssertion(Annotation( "ncithesaurus:Cortical_Cord") "UMLS:C1511527") AnnotationAssertion( "VHOG:0001339") AnnotationAssertion( "ovigerous cord") AnnotationAssertion(Annotation( "VHOG:0001339") Annotation( ) "ovigerous cords") AnnotationAssertion( "uberon") AnnotationAssertion( "cortical cord") AnnotationAssertion( "cortical sex cord") AnnotationAssertion( "ovary primitive sex cord") AnnotationAssertion( "secondary cord") AnnotationAssertion( "UBERON:0005296") AnnotationAssertion(rdfs:label "ovary sex cord") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (testis sex cord) AnnotationAssertion(Annotation( ) "The testis cords are precursors to the rete testis. They play several different roles in the development of the male genitals[WP].") AnnotationAssertion( "TODO - check primary vs testis") AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0002011") AnnotationAssertion( "EHDAA:8152") AnnotationAssertion( "EMAPA:29098") AnnotationAssertion( "VHOG:0001321") AnnotationAssertion(Annotation( "MP:0006424") "testis cord") AnnotationAssertion(Annotation( "EHDAA2:0002011") "testis primary sex cords") AnnotationAssertion( "uberon") AnnotationAssertion( "primary sex cord") AnnotationAssertion( "testis primitive sex cord") AnnotationAssertion( "UBERON:0005297") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "testis sex cord") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "Bgee:AN"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (skin of clitoris) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A zone of skin that is part of a clitoris [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( "FMA:20168") AnnotationAssertion( "clitoris skin") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005298") AnnotationAssertion(rdfs:label "skin of clitoris") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (prepuce of clitoris) AnnotationAssertion(Annotation( ) Annotation( ) "A retractable double-layered fold of skin and mucous membrane that covers the clitoral glans.") AnnotationAssertion( "FMA has FMA:27886 skin of prepuce of clitoris") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:30699") AnnotationAssertion( "FMA:20169") AnnotationAssertion( "NCIT:C32590") AnnotationAssertion(Annotation( "ncithesaurus:Female_Prepuce") "UMLS:C0227771") AnnotationAssertion(Annotation( ) "clitoral hood") AnnotationAssertion( "clitoral prepuce") AnnotationAssertion( "clitoris prepuce") AnnotationAssertion(Annotation( "EMAPA:30699") "prepuce of female") AnnotationAssertion( "prepuce of the clitoris") AnnotationAssertion(Annotation( ) "preputium clitoridis") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005299") AnnotationAssertion(rdfs:label "prepuce of clitoris") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/b/bd/Clitoris_outer_anatomy.gif"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete reproductive gland) AnnotationAssertion( "UBERON:0003937") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005300") AnnotationAssertion(rdfs:label "obsolete reproductive gland") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (hypogastric nerve) AnnotationAssertion(Annotation( ) "The transition between the superior hypogastric plexus and the inferior hypogastric plexus.") AnnotationAssertion( "check plexus vs nerve. WP indicates it is a 'transition'") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:18225") AnnotationAssertion( "FMA:77596") AnnotationAssertion( "MA:0001140") AnnotationAssertion( "MESH:D007001") AnnotationAssertion( "NCIT:C52831") AnnotationAssertion(Annotation( "ncithesaurus:Hypogastric_Nerve_Plexus") "UMLS:C1711378") AnnotationAssertion(Annotation( "MA:0001140") "hypogastric nerve plexus") AnnotationAssertion(Annotation( "EMAPA:18225") "hypogastric plexus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "nervus hypogastricus") AnnotationAssertion( "UBERON:0005303") AnnotationAssertion(rdfs:label "hypogastric nerve") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/2/2d/Gray847.png"^^xsd:anyURI) SubClassOf( ) # Class: (submucous nerve plexus) AnnotationAssertion(Annotation( "ISBN:0-683-40008-8"^^xsd:string) Annotation( "MP:0010800") "The gangliated plexus of unmyelinated nerve fibers that ramify the stomach and intestinal submucosa.") AnnotationAssertion(Annotation( "FMA"^^xsd:string) "in FMA this is part of the esophagus, duodenum and intestine; this violates part-disjointness axioms in uberon") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:35834") AnnotationAssertion( "FMA:21542") AnnotationAssertion( "GAID:801") AnnotationAssertion( "MA:0001149") AnnotationAssertion( "MESH:D013368") AnnotationAssertion( "NCIT:C52747") AnnotationAssertion(Annotation( "ncithesaurus:Submucous_Nerve_Plexus") "UMLS:C0038564") AnnotationAssertion(Annotation( ) Annotation( "FMA:21542") "submucosal nerve plexus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "MA:0001149") "Henle's plexus") AnnotationAssertion(Annotation( "HP:0002251") Annotation( "MA:0001149") "Meissner's plexus") AnnotationAssertion(Annotation( "MA:0001149") "meissner's plexus") AnnotationAssertion( "UBERON:0005304") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "submucous nerve plexus") SubClassOf( ) SubClassOf(Annotation( "FMA-modified") ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) SubClassOf(Annotation( "FMA-modified") ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) SubClassOf( ObjectSomeValuesFrom( )) # Class: (thyroid follicle) AnnotationAssertion(Annotation( "BTO:0004708") "Discrete, cystlike units of the thyroid gland that are lined with cuboidal epithelium and are filled with a colloid substance, about 30 to each lobule[BTO].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0004708") AnnotationAssertion( "EMAPA:19307") AnnotationAssertion( "EMAPA:19308") AnnotationAssertion( "FMA:68805") AnnotationAssertion( "MA:0000726") AnnotationAssertion( "NCIT:C33782") AnnotationAssertion( "TAO:0001072") AnnotationAssertion(Annotation( "ncithesaurus:Thyroid_Gland_Follicle") "UMLS:C0229577") AnnotationAssertion( "ZFA:0001072") AnnotationAssertion( "thyroid gland follicle") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "ZFA:0001072") Annotation( ) "thyroid follicles") AnnotationAssertion( "UBERON:0005305") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "thyroid follicle") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (blastema) AnnotationAssertion(Annotation( ) Annotation( "ZFA:0001270") Annotation( "ZFIN:ZDB-PUB-061108-12") "A blastema is a mass of cells capable of growth and regeneration into organs or body parts. Historically blastema have been thought to be composed of undifferentiated pluripotent cells, but recent research indicates that in some organisms blastema may retain memory of tissue origin.[1] Blastemata are typically found in the early stages of an organism's development such as in embryos, and in the regeneration of tissues, organs and bone[WP]. A regenerating tissue composed of a proliferative mass of undifferentiated progenitor cells from which new differentiated structures arise[ZFA].") AnnotationAssertion(Annotation( "ZFA"^^xsd:string) "the ZFA class called 'blastema' belongs with the subclass, blastema of regenerating fin/limb") AnnotationAssertion( ) AnnotationAssertion( "BTO:0001638") AnnotationAssertion( "EFO:0003658") AnnotationAssertion( "TAO:0001270") AnnotationAssertion( "XAO:0004060") AnnotationAssertion(Annotation( ) "blastemata") AnnotationAssertion(Annotation( "ZFIN:ZDB-PUB-061108-12") "regeneration blastema") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005306") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "blastema") SubClassOf(Annotation( "ZFA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (nephrostome) AnnotationAssertion(Annotation( "GO:0039018") "The nephrostome is the opening of the pronephros into the body cavity[GO].") AnnotationAssertion( ) AnnotationAssertion( "AAO:0011069") AnnotationAssertion( "XAO:0000062") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005308") AnnotationAssertion(rdfs:label "nephrostome") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pronephric nephron) AnnotationAssertion(Annotation( "GO:0039019") "A pronephric nephron is the functional unit of the pronephros[GO].") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0011091") Annotation( "AAO"^^xsd:string) Annotation( "UBERON:0005309") "The structure that is the basic functional unit of the pronephros.[AAO]") AnnotationAssertion( "AAO:0011091") AnnotationAssertion( "XAO:0000285") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005309") AnnotationAssertion(rdfs:label "pronephric nephron") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pronephric nephron tubule) AnnotationAssertion(Annotation( "GO:0039020") "The pronephric nephron tubule is an epithelial tube that is part of the pronephric nephron and connects the filtration unit (glomerulus or glomus) of the pronephros to the pronephric duct[GO].") AnnotationAssertion(Annotation( "ISBN:0073040584"^^xsd:string) ) AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0001558") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "Bilaterally paired tubes connecting the pronephric glomeruli to the pronephric ducts. In zebrafish and other teleosts, the pronephric nephron and tubules form after the pronephric duct, connecting to the anterior-most tip of the pronephric ducts. Drummond, 2000.[TAO]") AnnotationAssertion( "TAO:0001558") AnnotationAssertion( "XAO:0004105") AnnotationAssertion( "ZFA:0001558") AnnotationAssertion(Annotation( "ZFA:0001558") "pronephric tubule") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "ZFA:0001558") "ciliated neck segment") AnnotationAssertion( "UBERON:0005310") AnnotationAssertion(rdfs:label "pronephric nephron tubule") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "GO"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (mammary placode) AnnotationAssertion(Annotation( "GO:0060596") "The mammary placode is a transient lens shaped structure that will give rise to the mammary bud proper[GO].") AnnotationAssertion( "TODO develops_from") AnnotationAssertion( "in mouse, five pairs of symmetrically positioned mammary placodes (three thoracic and two inguinal) form at reproducible locations along the mammary line at E11.5; the individual pairs develop asynchronously and in a distinct order; pair 3 is first, followed by pair 4, then by pairs 1 and 5 (which develop together), and finally by pair 2; the orientation of placodal cells is not uniform, suggesting that placodes are formed by migration of cells from the mammary line; between E11.5 and E12.5, each mammary placode expands and invaginates into the underlying mesenchyme to form an early bulb-shaped mammary bud[MP]") AnnotationAssertion( "EMAPA:35541") AnnotationAssertion( "uberon") AnnotationAssertion( "mammary anlage") AnnotationAssertion( "UBERON:0005311") AnnotationAssertion(rdfs:label "mammary placode") SubClassOf(Annotation( "NCBIBook:NBK53175"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "Stedmans") ObjectSomeValuesFrom( )) # Class: (primary ureteric bud) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005312") AnnotationAssertion(rdfs:label "primary ureteric bud") SubClassOf( ) # Class: (mammary duct terminal end bud) AnnotationAssertion(Annotation( "MGI:anna"^^xsd:string) "A unique club-shaped epithelial structure that develops at the tip of the mammary duct at the onset of puberty under the action of circulating hormones.") AnnotationAssertion( "terminal end buds (TEBs) consist of an outer layer of undifferentiated myoepithelial progenitor cells ('cap cells'), and a multilayered inner core of luminal epithelial cells ('body') fated to form the walls of the ductal lumen; both layers have high rates of mitosis, consistent with a motile organ dedicated to ductal morphogenesis") AnnotationAssertion( "TEBs proliferate, ramify, and actively invade the fad pad to allow the formation of a complex branching structure; this process of branching morphogenesis concludes at ~10-12 weeks of age in mice, when TEBs have traversed the length of the fat pad and a fully developed ductal tree has formed") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37900") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005313") AnnotationAssertion(rdfs:label "mammary duct terminal end bud") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (alveolar primary septum) AnnotationAssertion(Annotation( "GO:0061143") "A primary alveolar septum is a specialized epithelium that surrounds the saccule as it forms[GO].") AnnotationAssertion( "TODO - check UBERON:0004893 interalveolar septum") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005314") AnnotationAssertion(rdfs:label "alveolar primary septum") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (alveolar secondary septum) AnnotationAssertion(Annotation( "GO:0061144") "A secondary alveolar septum is a specialized epithelium that subdivides the initial saccule[GO].") AnnotationAssertion( "TODO - check UBERON:0004893 interalveolar septum") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005315") AnnotationAssertion(rdfs:label "alveolar secondary septum") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (endocardial endothelium) AnnotationAssertion(Annotation( "UBERON:cjm"^^xsd:string) "The endothelial lining of the endocardium.") AnnotationAssertion( "FMA:83596") AnnotationAssertion(Annotation( "FMA:83596") "endocardium endothelium") AnnotationAssertion(Annotation( "FMA:83596") "endothelium of endocardium") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005316") AnnotationAssertion(rdfs:label "endocardial endothelium") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pulmonary artery endothelium) AnnotationAssertion(Annotation( "GO:0061155") "An pulmonary artery endothelium is an epithelium that lines the pulmonary artery[GO].") AnnotationAssertion( "BTO:0000137") AnnotationAssertion(Annotation( "GO:0061155") "pulmonary artery endothelial tube") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005317") AnnotationAssertion(rdfs:label "pulmonary artery endothelium") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (mesonephric collecting duct) AnnotationAssertion(Annotation( "GO:0061211") "The collecting duct is the final common path through which urine flows before entering the ureter and then emptying into the bladder[GO].") AnnotationAssertion( "AAO:0010390") AnnotationAssertion( "XAO:0000151") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005319") AnnotationAssertion(rdfs:label "mesonephric collecting duct") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (mesonephric juxtaglomerular apparatus) AnnotationAssertion(Annotation( "GO:0061212") "The juxtaglomerular apparatus lies adjacent to the glomerulus and regulates kidney function by maintaining the blood flow to the kidney and the filtration rate[GO].") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005320") AnnotationAssertion(rdfs:label "mesonephric juxtaglomerular apparatus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (mesonephric smooth muscle tissue) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005321") AnnotationAssertion(rdfs:label "mesonephric smooth muscle tissue") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (mesonephric nephron) AnnotationAssertion(Annotation( ) "A nephron that is part of a mesonephros.") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0010387") Annotation( "AAO"^^xsd:string) Annotation( ) "The structure that is the basic functional unit of the kidney.[AAO]") AnnotationAssertion( "AAO:0010387") AnnotationAssertion( "XAO:0000292") AnnotationAssertion( "ZFA:0005592") AnnotationAssertion( "nephron of mesonephros") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "ZFA:0005592") "stage IV nephron") AnnotationAssertion( "UBERON:0005322") AnnotationAssertion(rdfs:label "mesonephric nephron") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "XAO"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (mesonephric mesenchyme) AnnotationAssertion(Annotation( "GO:0061219") "Mesonephric mesenchyme is the tissue made up of loosely connected mesenchymal cells in the mesonephros[GO].") AnnotationAssertion( "AAO:0011062") AnnotationAssertion( "EHDAA2:0001132") AnnotationAssertion( "EMAPA:16745") AnnotationAssertion( "XAO:0000291") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005323") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "mesonephric mesenchyme") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (mesonephric macula densa) AnnotationAssertion(Annotation( "GO:0061220") "The mesonephric macula densa is an area of specialized cells in the distal tubule of the mesonephros that makes contact with the vascular pole of the glomerulus[GO].") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005324") AnnotationAssertion(rdfs:label "mesonephric macula densa") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (mesonephric glomerulus) AnnotationAssertion(Annotation( "GO:0061224") "The mesonephric glomerulus is a capillary tuft which forms a close network with the visceral epithelium (podocytes) and the mesangium to form the filtration barrier and is surrounded by Bowman's capsule in nephrons of the mature vertebrate kidney, or mesonephros[GO].") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0010388") Annotation( "AAO"^^xsd:string) Annotation( "AAO:BJB"^^xsd:string) "A tuft of capillaries found in a Bowman's capsule in which waste products are filtered from the blood and urine formation is initiated.[AAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001238") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0127224411 Vize PD, Woolf AS, Bard JBL, The kidney: From normal development to congenital disease (2003) p.3") "In animals in which the mesonephros is the terminal kidney, such as amphibians and fish, the final organ is very complex, containing a large number of nephrons, most of which have an internal glomerulus.[well established][VHOG]") AnnotationAssertion(Annotation( "XAO"^^xsd:string) "XAO/AAO class belongs here, as it refers to mesonephric structure") AnnotationAssertion(Annotation( "AAO:0010388") Annotation( ) "glomerulus") AnnotationAssertion( ) AnnotationAssertion( "AAO:0010388") AnnotationAssertion( "EMAPA:30568") AnnotationAssertion( "VHOG:0001238") AnnotationAssertion( "XAO:0000146") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005325") AnnotationAssertion(rdfs:label "mesonephric glomerulus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (mesonephric glomerulus vasculature) AnnotationAssertion(Annotation( "GO:0061231") "The mesonephric glomerulus vasculature is composed of the tubule structures that carry blood or lymph in the mesonephric glomerulus[GO].") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005326") AnnotationAssertion(rdfs:label "mesonephric glomerulus vasculature") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (mesonephric glomerular epithelium) AnnotationAssertion(Annotation( "GO:0061232") "A mesonephric glomerular visceral epithelial cell is a specialized epithelial cell that contains 'feet' that interdigitate with the 'feet' of other glomerular epithelial cells in the mesonephros[GO].") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005327") AnnotationAssertion(rdfs:label "mesonephric glomerular epithelium") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (mesonephric comma-shaped body) AnnotationAssertion(Annotation( "GO:0061236") "The mesonephric comma-shaped body is the precursor structure to the mesonephric S-shaped body that contributes to the morphogenesis of a nephron in the mesonephros[GO].") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005328") AnnotationAssertion(rdfs:label "mesonephric comma-shaped body") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (mesonephric nephron tubule) AnnotationAssertion(Annotation( "GO:0061240") "A mesonephric nephron tubule is an epithelial tube that is part of the mesonephric nephron, the functional part of the mesonephros[GO].") AnnotationAssertion(Annotation( ) "mesonephric renal tubule") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005329") AnnotationAssertion(rdfs:label "mesonephric nephron tubule") SubClassOf( ) SubClassOf( ) SubClassOf( ) # Class: (mesonephric nephron epithelium) AnnotationAssertion(Annotation( "GO:0061241") "The mesonephric nephron epithelium is a tissue that covers the surface of a nephron in the mesonephros[GO].") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005330") AnnotationAssertion(rdfs:label "mesonephric nephron epithelium") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (mesonephric renal vesicle) AnnotationAssertion(Annotation( "GO:0061243") "The renal vesicle is the primordial structure of the mesonephric nephron epithelium, and is formed by the condensation of mesenchymal cells[GO].") AnnotationAssertion( ) AnnotationAssertion( "ZFA:0005586") AnnotationAssertion( "mesonephric vesicle") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005331") AnnotationAssertion(rdfs:label "mesonephric renal vesicle") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "ZFA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (mesonephric S-shaped body) AnnotationAssertion(Annotation( "GO:0061244") "The mesonephric S-shaped body is the successor of the mesonephric comma-shaped body that contributes to the morphogenesis of a nephron in the mesonephros[GO].") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005332") AnnotationAssertion(rdfs:label "mesonephric S-shaped body") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (mammary bud) AnnotationAssertion(Annotation( ) "A bulb of epithelial cells that forms from the mammary placode that develops into the mammary gland.") AnnotationAssertion(Annotation( ) "produced along the length of the embryonic mammary ridge these buds represent the future locations of the mammary glands. Invagination of ectoderm at each bud leads to the development of epithelial diverticula, later maturing as lactiferous ducts") AnnotationAssertion( "UBERON:0004181") AnnotationAssertion( "EMAPA:35536") AnnotationAssertion( "lactiferous gland bud") AnnotationAssertion(Annotation( "GO:0060648") "mammary gland bud") AnnotationAssertion( "uberon") AnnotationAssertion( "mammary primordium") AnnotationAssertion( "milk bud") AnnotationAssertion( "UBERON:0005333") AnnotationAssertion(rdfs:label "mammary bud") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (oral lamina propria) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A lamina propria that is part of a mucosa of oral region.") AnnotationAssertion( "EMAPA:26947") AnnotationAssertion( "lamina propria of oral mucosa") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005334") AnnotationAssertion(rdfs:label "oral lamina propria") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (chorioallantoic membrane) AnnotationAssertion(Annotation( ) "The chorioallantoic membrane is a vascular membrane found in eggs of some amniotes, such as birds and reptiles. It is formed by the fusion of the mesodermal layers of two developmental structures: the allantois and the chorion. Three different layers compose the chorioallantoic membrane; these are called the chorionic epithelium, the mesenchyme and the allantoic epithelium. Blood capillaries and sinuses are found between epithelial cells of the chorionic layer, allowing close contact (within 0.2 N ) AnnotationAssertion(Annotation( "ISBN:0073040584"^^xsd:string) "respiratory membrane") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0000251") AnnotationAssertion( "NCIT:C28216") AnnotationAssertion(Annotation( "ncithesaurus:Chorioallantoic_Membrane") "UMLS:C0178551") AnnotationAssertion(Annotation( "BTO:0000251") "chorioallantois") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005335") AnnotationAssertion(rdfs:label "chorioallantoic membrane") AnnotationAssertion( "Smallpox:CAM.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (capillary layer of choroid) AnnotationAssertion(Annotation( ) "The capillary lamina of choroid or choriocapillaris is a layer of capillaries that is immediately adjacent to Bruch's membrane in the choroid.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:58437") AnnotationAssertion(Annotation( "FMA:58437") "capillary lamina of choroid") AnnotationAssertion(Annotation( "FMA:58437") "capillary layer of choroid") AnnotationAssertion(Annotation( "FMA:58437") "inner layer of choroid proper") AnnotationAssertion( "uberon") AnnotationAssertion( "capillary lamina of choroid or choriocapillaris") AnnotationAssertion(Annotation( ) "choriocapillaris") AnnotationAssertion( "lamina choriocapillaris") AnnotationAssertion(Annotation( ) Annotation( ) "lamina choroidocapillaris") AnnotationAssertion( "UBERON:0005336") AnnotationAssertion(rdfs:label "capillary layer of choroid") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) SubClassOf( ObjectSomeValuesFrom( )) # Class: (outflow tract of ventricle) AnnotationAssertion(Annotation( ) "A ventricular outflow tract is a portion of either the left ventricle or right ventricle of the heart through which blood passes in order to enter the great arteries. The right ventricular outflow tract (RVOT) is an infundibular extension of the ventricular cavity which connects to the pulmonary artery. The left ventricular outflow tract (LVOT), which connects to the aorta, is nearly indistinguishable from the rest of the ventricle[WP].") AnnotationAssertion( ) AnnotationAssertion( "FMA:13225") AnnotationAssertion( "XAO:0004140") AnnotationAssertion(Annotation( "MP:0010224") "heart ventricle outflow tract") AnnotationAssertion( "outflow part of ventricle") AnnotationAssertion(Annotation( ) "ventricular outflow tract") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005337") AnnotationAssertion(rdfs:label "outflow tract of ventricle") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (outflow tract aortic component) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An outflow tract that is part of a aorta.") AnnotationAssertion( "merge with LVOT?") AnnotationAssertion( "EHDAA2:0001353") AnnotationAssertion( "EMAPA:17329") AnnotationAssertion( "MA:0000101") AnnotationAssertion( "VHOG:0001394") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005338") AnnotationAssertion(rdfs:label "outflow tract aortic component") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (outflow tract pulmonary component) AnnotationAssertion( "merge with RVOT?") AnnotationAssertion( "EHDAA2:0001359") AnnotationAssertion( "EHDAA:4401") AnnotationAssertion( "EMAPA:17330") AnnotationAssertion( "MA:0000102") AnnotationAssertion( "VHOG:0001395") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005339") AnnotationAssertion(rdfs:label "outflow tract pulmonary component") SubClassOf( ) # Class: (dorsal telencephalic commissure) AnnotationAssertion(Annotation( "MP:0008219") "A fiber tracts that connect the dorsal region of the two cerebral hemispheres and span the longitudinal fissure, including the corpus callosum and hippocampal commissure[MP].") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37844") AnnotationAssertion( "NLX:147892") AnnotationAssertion(Annotation( "MP:0008219") "dorsal commissure") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005340") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "dorsal telencephalic commissure") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses( ) # Class: (ventral commissure) AnnotationAssertion(Annotation( "MP:0008220") "The fiber tracts that connect the ventral region of the two cerebral hemispheres and span the longitudinal fissure, including the anterior and the habenular commissures[MP].") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37845") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005341") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "ventral commissure") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (malleus head) AnnotationAssertion(Annotation( "MP:0008379") "Rounded portion of the malleus that articulates with the body of the incus[MP].") AnnotationAssertion( ) AnnotationAssertion( "FMA:52761") AnnotationAssertion( "MA:0002987") AnnotationAssertion(Annotation( "FMA:52761") "head of malleus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005342") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "malleus head") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (cortical plate) AnnotationAssertion(Annotation( ) Annotation( "MP:0008439") "The outer neural tube region in which post-mitotic neuroblasts migrate along radial glia to form the adult cortical layers[MP].") AnnotationAssertion( "A single stem cell in the ventricular layer can give rise to neurons (and glial cells) in any of the cortical layers (Walsh and Cepko 1988)[NCBIBook:NBK10047]") AnnotationAssertion( "in humans develops into cortical layers II-VI") AnnotationAssertion(Annotation( "BRAINSPAN:BRAINSPAN") Annotation( ) "CP") AnnotationAssertion(Annotation( ) Annotation( ) "CxP") AnnotationAssertion( ) AnnotationAssertion( "BAMS:CTXpl") AnnotationAssertion( "DHBA:10515") AnnotationAssertion( "EMAPA:32711") AnnotationAssertion( "MBA:695") AnnotationAssertion( "PBA:294021914") AnnotationAssertion( "cerebral cortex cortical plate") AnnotationAssertion(Annotation( ) "future cortical layers II-VI") AnnotationAssertion( "neocortex cortical plate") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "future neocortex") AnnotationAssertion( "UBERON:0005343") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "cortical plate") SubClassOf( ) SubClassOf(Annotation( "NCBIBook:NBK10047") ObjectSomeValuesFrom( )) # Class: (peritoneal vaginal process) AnnotationAssertion(Annotation( ) Annotation( "MP:0009218") "A peritoneal diverticulum in the embryonic lower anterior abdominal wall that traverses the inguinal canal. In the male it forms the tunica vaginalis testis and normally loses its connection with the peritoneal cavity; a persistent processus vaginalis in the female is known as the canal of Nuck[MP].") AnnotationAssertion( "processus vaginalis") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MP:0009218") "processus vaginalis peritoneus") AnnotationAssertion(Annotation( ) Annotation( ) "saccus vaginalis") AnnotationAssertion(Annotation( "MP:0009218") "vaginal process of peritoneum") AnnotationAssertion(Annotation( ) Annotation( ) "processus vaginalis peritonei masculinus") AnnotationAssertion( "uberon") AnnotationAssertion( "peritoneal diverticulum") AnnotationAssertion(Annotation( ) Annotation( ) "processus vaginalis peritonei") AnnotationAssertion(Annotation( "MP:0009218") Annotation( ) "processus vaginalis peritonei") AnnotationAssertion(Annotation( ) "vaginal process") AnnotationAssertion( "vaginal process of peritoneum") AnnotationAssertion(Annotation( "MP:0009218") "vaginal process of testis") AnnotationAssertion( "vaginal process of the peritoneum") AnnotationAssertion( "UBERON:0005344") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "peritoneal vaginal process") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/e/ed/Mesorchium.svg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (cerebellum vermis lobule VIIA) AnnotationAssertion(Annotation( ) Annotation( "MP:0009998") "The folium vermis is a short, narrow, concealed band at the posterior extremity of the vermis, consisting apparently of a single folium, but in reality marked on its upper and under surfaces by secondary fissures. Laterally, it expands in either hemisphere into a considerable lobule, the superior semilunar lobule (lobulus semilunaris superior; postero-superior lobules), which occupies the posterior third of the upper surface of the hemisphere, and is bounded below by the horizontal sulcus. The superior semilunar lobules and the folium vermis form the lobus semilunaris.") AnnotationAssertion(Annotation( "MA:0001004") "folium") AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37823") AnnotationAssertion( "FMA:83889") AnnotationAssertion( "NLXANAT:20081231") AnnotationAssertion(Annotation( "FMA:83889") "folium of vermis of cerebellum") AnnotationAssertion(Annotation( "NLXANAT:20081231") "vermic lobule VIIA") AnnotationAssertion(Annotation( "MP:0009995") "folium lobule") AnnotationAssertion( "uberon") AnnotationAssertion( "folium of cerebellum") AnnotationAssertion(Annotation( "FMA:83889") "neuraxis folium") AnnotationAssertion( "UBERON:0005345") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "cerebellum vermis lobule VIIA") SubClassOf(Annotation( "NIF"^^xsd:string) ) # Class: (cerebellum vermis lobule VIIB) AnnotationAssertion( ) AnnotationAssertion( "BAMS:Tuberal_region") AnnotationAssertion( "DHBA:12848") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37824") AnnotationAssertion( "FMA:83890") AnnotationAssertion( "HBA:12940") AnnotationAssertion( "HBA:4708") AnnotationAssertion( "NLXANAT:20081232") AnnotationAssertion(Annotation( "FMA:83890") "lobule VII B of vermis") AnnotationAssertion(Annotation( "FMA:83890") "neuraxis tuber") AnnotationAssertion(Annotation( "FMA:83890") "tuber of vermis of cerebellum") AnnotationAssertion(Annotation( "NLXANAT:20081232") "vermic lobule VIIb") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "HBA:4708") Annotation( ) "Ve-VIIB") AnnotationAssertion(Annotation( "DHBA:CbVIIb") "lobule VIIB (gracile lobule)") AnnotationAssertion(Annotation( "NLXANAT:20081232") "tuber") AnnotationAssertion(Annotation( "BAMS:tuberal_region") "tuberal region") AnnotationAssertion( "UBERON:0005346") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "cerebellum vermis lobule VIIB") SubClassOf(Annotation( "NIF"^^xsd:string) ) # Class: (ansiform lobule) AnnotationAssertion(Annotation( ) "A lobule comprising the greater part of the hemisphere of the cerebellum; its superior and inferior surfaces are separated by the horizontal fissure into major parts known as crus I (superior semilunar lobule) and crus II (inferior semilunar lobule).") AnnotationAssertion( "MP says the ansiform lobule not present in humans; however, FMA seems to have this, as well as two subclasses, so for now we group based on synonymy from multiple sources") AnnotationAssertion( ) AnnotationAssertion( "BAMS:AN") AnnotationAssertion( "BAMS:An") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37397") AnnotationAssertion( "FMA:72257") AnnotationAssertion( "MBA:1017") AnnotationAssertion(Annotation( "FMA:72257") "ansiform lobule of cerebellum") AnnotationAssertion(Annotation( "FMA:72257") "ansiform lobule of cerebellum [hVIIa]") AnnotationAssertion(Annotation( "FMA:72257") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "lobuli semilunares cerebelli") AnnotationAssertion(Annotation( "FMA:72257") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "lobulus ansiformis cerebelli") AnnotationAssertion(Annotation( "FMA:72257") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "lobulus ansiformis cerebelli [h vii a]") AnnotationAssertion(Annotation( "FMA:72257") "semilunar lobules of cerebellum") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:72257") "ansiform lobule of cerebellum [H VII A]") AnnotationAssertion( "UBERON:0005348") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "ansiform lobule") SubClassOf( ) # Class: (paramedian lobule) AnnotationAssertion(Annotation( ) "The anterior portion of the posteroinferior lobule of the cerebellum, the posterior portion being the semilunar lobule inferior; the two are continuous with the tuber of the vermis.") AnnotationAssertion( "MP says not present in humans; however, we group based on synonymy from multiple sources") AnnotationAssertion( ) AnnotationAssertion( "BAMS:GrL") AnnotationAssertion( "BAMS:PM") AnnotationAssertion( "BAMS:PRM") AnnotationAssertion( "DHBA:12850") AnnotationAssertion( "DMBA:16943") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37403") AnnotationAssertion( "FMA:72523") AnnotationAssertion( "HBA:12942") AnnotationAssertion( "MBA:1025") AnnotationAssertion( "NLXANAT:20081210") AnnotationAssertion(Annotation( "FMA:72523") "gracile lobule") AnnotationAssertion(Annotation( "NLXANAT:20081210") "hemispheric lobule VIIBii") AnnotationAssertion(Annotation( "DHBA:CbVIIIb") "lobule VIIIB (pyramis and biventral lobule, posterior part)") AnnotationAssertion(Annotation( "NLXANAT:20081210") Annotation( ) "lobulus gracilis") AnnotationAssertion(Annotation( "NLXANAT:20081210") "lobulus paramedianus") AnnotationAssertion(Annotation( "FMA:72523") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "lobulus paramedianus [hVIIb]") AnnotationAssertion(Annotation( "NLXANAT:20081210") "paramedian 1 (hVII)") AnnotationAssertion(Annotation( "FMA:72523") "paramedian lobule [HVIIB]") AnnotationAssertion(Annotation( "FMA:72523") "paramedian lobule [h vii b]") AnnotationAssertion(Annotation( "FMA:72523") "paramedian lobule [hVIIIb]") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BAMS:PRM") "paramedian lobule of the cerebellum") AnnotationAssertion( "UBERON:0005349") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "paramedian lobule") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lobule simplex) AnnotationAssertion(Annotation( "MP:0010005") "MP says not present in humans; however, we group based on synonymy from multiple sources") AnnotationAssertion( ) AnnotationAssertion( "BAMS:SIM") AnnotationAssertion( "BAMS:SL") AnnotationAssertion( "BAMS:Sim") AnnotationAssertion( "DMBA:16940") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37401") AnnotationAssertion( "FMA:72522") AnnotationAssertion( "MBA:1007") AnnotationAssertion( "NLXANAT:20081206") AnnotationAssertion(Annotation( "NLXANAT:20081206") "hemispheric lobule VI") AnnotationAssertion(Annotation( "FMA:72522") "lobule h VI of larsell") AnnotationAssertion(Annotation( "FMA:72522") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "lobulus quadrangularis pars caudalis/posterior") AnnotationAssertion(Annotation( "FMA:72522") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "lobulus quadrangularis pars inferoposterior") AnnotationAssertion(Annotation( "NLXANAT:20081206") "lobulus quadrangularis posterior") AnnotationAssertion(Annotation( "FMA:72522") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "lobulus quadrangularis posterior cerebelli [H VI]") AnnotationAssertion(Annotation( "NLXANAT:20081206") "lobulus simplex") AnnotationAssertion(Annotation( "FMA:72522") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "lobulus simplex cerebelli [h vi et vi]") AnnotationAssertion(Annotation( "FMA:72522") "posterior crescentic lobule of cerebellum") AnnotationAssertion(Annotation( "FMA:72522") "semilunar lobule-1 (posterior)") AnnotationAssertion(Annotation( "MP:0010005") "simple lobule") AnnotationAssertion(Annotation( "FMA:72522") "simple lobule of cerebellum") AnnotationAssertion(Annotation( "FMA:72522") "simple lobule of cerebellum [h VI and VI]") AnnotationAssertion(Annotation( "FMA:72522") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "simplex") AnnotationAssertion(Annotation( "NLXANAT:20081206") "simplex (hVI)") AnnotationAssertion(Annotation( "NLXANAT:20081206") "simplex lobule") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:72522") "lobule VI of hemisphere of cerebellum") AnnotationAssertion(Annotation( "BAMS:SIM") "simple lobule of the cerebellum") AnnotationAssertion( "UBERON:0005350") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "lobule simplex") SubClassOf( ) SubClassOf( ) # Class: (paraflocculus) AnnotationAssertion( "consider separate class for IX.") AnnotationAssertion( "large in mouse, insignificant in humans") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:CbT") AnnotationAssertion( "BAMS:PFL") AnnotationAssertion( "BAMS:PFl") AnnotationAssertion( "DMBA:16945") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37402") AnnotationAssertion( "FMA:278790") AnnotationAssertion( "FMA:83885") AnnotationAssertion( "MBA:1041") AnnotationAssertion( "NLXANAT:20081212") AnnotationAssertion(Annotation( "NLXANAT:20081212") "cerebellar tonsil") AnnotationAssertion(Annotation( "FMA:83885") "neuraxis paraflocculus") AnnotationAssertion(Annotation( "ISBN:0123813611"^^xsd:string) "parafloccular lobule of cerebellum") AnnotationAssertion(Annotation( "FMA:83885") "paraflocculus of cerebellum") AnnotationAssertion(Annotation( "NLXANAT:20081212") "tonsil (HXI)") AnnotationAssertion(Annotation( "NLXANAT:20081212") "tonsilla") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NLXANAT:20081212") Annotation( ) "hemispheric lobule IX") AnnotationAssertion( "UBERON:0005351") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "paraflocculus") SubClassOf( ) SubClassOf( ) # Class: (spermatic cord) AnnotationAssertion(Annotation( ) Annotation( "MP:0010145") "The cord-like structure in males comprising the vas deferens and associated tissue that runs from the abdomen down to each testis[MP].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:19937") AnnotationAssertion( "GAID:395") AnnotationAssertion( "MESH:D013085") AnnotationAssertion( "NCIT:C12329") AnnotationAssertion(Annotation( "ncithesaurus:Spermatic_Cord") "UMLS:C0037855") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "funiculus spermaticus") AnnotationAssertion( "spermatic chord") AnnotationAssertion( "UBERON:0005352") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "spermatic cord") AnnotationAssertion( "Male:anatomy.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (spleen perifollicular zone) AnnotationAssertion(Annotation( "MP:0010245") "The compartment located between the marginal zone and the red pulp harboring scattered B and T lymphocytes[MP].") AnnotationAssertion( "TODO - check spleen marginal sinus") AnnotationAssertion(Annotation( "MP:0002363") ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MP:0002363") "The perifollicular zone, which is present in human and not rodents, may be the functional equivalent of the marginal sinus in rodents.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005353") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "spleen perifollicular zone") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (malleus processus brevis) AnnotationAssertion(Annotation( "MP:0010324") "The projection extending from the base of the manubrium of the malleus which contacts the upper part of the tympanic membrane where the tympanic cavity makes a deep pocket (epitympanic pocket) surrounding the cartilaginous nodule[MP].") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005354") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "malleus processus brevis") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (malleus neck) AnnotationAssertion(Annotation( ) Annotation( "MP:0010327") "The narrow contracted section of the malleus located between the head and the manubrium[MP].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:52762") AnnotationAssertion( "MA:0002988") AnnotationAssertion(Annotation( "FMA:52762") "neck of malleus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "collum mallei") AnnotationAssertion( "UBERON:0005355") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "malleus neck") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/6/6b/Gray916.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (Rathke's pouch) AnnotationAssertion(Annotation( ) Annotation( "MP:0003817") "A pouch of ectoderm that grows out from the upper surface of the embryonic stomodeum and gives rise to the anterior and intermediate lobes of the pituitary gland[MP]. In embryogenesis, Rathke's pouch is a depression in the roof of the developing mouth in front of the buccopharyngeal membrane. It gives rise to the anterior pituitary (adenohypophysis), a part of the endocrine system[WP].") AnnotationAssertion( ) AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000674") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( ) "A depression that forms in the roof of the mouth of an embryo, anterior to the buccopharyngeal membrane. The walls of the diverticulum develop into the anterior lobe of the pituitary gland. [TFD][VHOG]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000674") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0030223693 Liem KF, Bemis WE, Walker WF, Grande L, Functional Anatomy of the Vertebrates: An Evolutionary Perspective (2001) p.510 and Figure 15-5") "It (the hypophysis) develops embryonically in all vertebrates from two ectodermal evaginations that meet and unite. An infundibulum grows ventrally from the diencephalon of the brain, and Rathke's pouch extends dorsally from the roof of the developing mouth, or stomodaeum. The infundibulum remains connected to the floor of the diencephalon, which becomes the hypothalamus, and gives rise to the part of the gland known as the neurohypophysis. (...) Rathke's pouch loses its connection with the stomodaeum in most adult vertebrates and gives rise to the rest of the gland, the adenohypophysis. (...) A well-developed hypophyseal system with functional connections to the hypothalamus is unique to craniates.[well established][VHOG]") AnnotationAssertion(Annotation( ) "median funnel­-shaped invagination of ectoderm, the nasohypophyseal pouch. It will contribute to the formation of the pituitary gland of the adult lamprey and is homologous to Rathke's pouch and perhaps to Hatschek 's pit (amphioxus).") AnnotationAssertion(Annotation( "EHDAA2"^^xsd:string) "EHDAA2 distinguishes between the adenohypophyseal pouch and it's precursor Rathke's pouch epithelium.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0011094") AnnotationAssertion( "EHDAA2:0001588") AnnotationAssertion( "EMAPA:16725") AnnotationAssertion( "FMA:302929") AnnotationAssertion( "NCIT:C34281") AnnotationAssertion( "NCIT:C54098") AnnotationAssertion(Annotation( "ncithesaurus:Rathke_s_Pouch") "UMLS:C0229548") AnnotationAssertion(Annotation( "ncithesaurus:Rathke_Pouch_Epithelium") "UMLS:C1709841") AnnotationAssertion( "VHOG:0000674") AnnotationAssertion( "XAO:0000430") AnnotationAssertion( "Rathke pouch") AnnotationAssertion( "pouch of Rathke") AnnotationAssertion(Annotation( "EHDAA2:0001473") "Rathkes pouch epithelium") AnnotationAssertion(Annotation( "EHDAA2:0001588") "adenohypophysial pouch") AnnotationAssertion( "uberon") AnnotationAssertion( "Rathke's cleft") AnnotationAssertion( "Rathke's cyst") AnnotationAssertion(Annotation( "MP:0003817") "Rathke's pocket") AnnotationAssertion( "craniobuccal pouch") AnnotationAssertion( "craniopharyngeal pouch") AnnotationAssertion(Annotation( ) "hypophyseal diverticulum") AnnotationAssertion(Annotation( "ISBN:0073040584"^^xsd:string) "hypophyseal pouch") AnnotationAssertion(Annotation( ) Annotation( ) "nasohypophyseal pouch") AnnotationAssertion(Annotation( "MP:0003817") "pituitary diverticulum") AnnotationAssertion( "UBERON:0005356") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "Rathke's pouch") SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "MP"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "NCBIBook:NBK53175"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (brain ependyma) AnnotationAssertion(Annotation( ) Annotation( "ISBN:0387949542") "The ependymal cell layer that lines the brain ventricles.") AnnotationAssertion(Annotation( "FMA"^^xsd:string) "in FMA this is treated as part of the ependyma, but here we treat ependyma as a portion") AnnotationAssertion( "EMAPA:35183") AnnotationAssertion( "FMA:242837") AnnotationAssertion( "MA:0000809") AnnotationAssertion( "MESH:D004805") AnnotationAssertion(Annotation( "FMA:242837") "ependyma of ventricular system of brain") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005357") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "brain ependyma") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (ventricle of nervous system) AnnotationAssertion(Annotation( ) "A layer in the central nervous system that lines system of communicating cavities in the brain and spinal cord.") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:35209") AnnotationAssertion( "FMA:242770") AnnotationAssertion(Annotation( "EMAPA:35209") "ventricular layer") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:242770") "region of wall of ventricular system of neuraxis") AnnotationAssertion( "UBERON:0005358") AnnotationAssertion(rdfs:label "ventricle of nervous system") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (spinal cord ependyma) AnnotationAssertion(Annotation( ) Annotation( "ISBN:0387949542") "The ependymal cell layer that lines the spinal cord.") AnnotationAssertion(Annotation( "FMA"^^xsd:string) "in FMA this is treated as part of the ependyma, but here we treat ependyma as a portion") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:35791") AnnotationAssertion( "FMA:242839") AnnotationAssertion( "MA:0001125") AnnotationAssertion(Annotation( "FMA:242839") "ependyma of central canal of spinal cord") AnnotationAssertion(Annotation( "MA:0001125") "spinal cord ependymal layer") AnnotationAssertion( "uberon") AnnotationAssertion( "spinal cord ventricular layer") AnnotationAssertion( "UBERON:0005359") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "spinal cord ependyma") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (inferior glossopharyngeal IX ganglion) AnnotationAssertion(Annotation( ) Annotation( "MP:0001084") "The lower group of sensory neuron cell bodies associated with the glossopharyngeal nerve[MP]. It is situated in a depression in the lower border of the petrous portion of the temporal bone[WP].") AnnotationAssertion(Annotation( "FMA"^^xsd:string) "We follow FMA and VHOG in making the relation subclass") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0000711") AnnotationAssertion( "EMAPA:17153") AnnotationAssertion( "FMA:53475") AnnotationAssertion( "MA:0001078") AnnotationAssertion( "VHOG:0000743") AnnotationAssertion(Annotation( "MP:0001084") "extracraniale ganglion") AnnotationAssertion(Annotation( "FMA:53475") "ganglion inferius (nervus glossopharygeus)") AnnotationAssertion(Annotation( "FMA:53475") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "ganglion inferius nervus glossopharyngei") AnnotationAssertion(Annotation( "FMA:53475") "ganglion of andersch") AnnotationAssertion(Annotation( "FMA:53475") "glossopharyngeal nerve inferior ganglion") AnnotationAssertion(Annotation( "FMA:53475") "glossopharyngeal nerve petrous ganglion") AnnotationAssertion(Annotation( "FMA:53475") "inferior ganglion of glossopharyngeal nerve") AnnotationAssertion(Annotation( "FMA:53475") "inferior glossopharyngeal ganglion") AnnotationAssertion(Annotation( "MP:0001084") "inferior glossopharyngeal ganglion of the glossopharyngeal (IX) nerve") AnnotationAssertion(Annotation( "FMA:53475") "ninth cranial nerve inferior ganglion") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "ganglion inferius nervi glossopharyngei") AnnotationAssertion(Annotation( ) Annotation( ) "ganglion petrosum") AnnotationAssertion(Annotation( "VHOG:0000743") "glossopharyngeal IX inferior ganglion") AnnotationAssertion(Annotation( "EMAPA:17153") "glossopharyngeal inferior ganglion") AnnotationAssertion(Annotation( ) Annotation( "MP:0001084") "petrosal ganglion") AnnotationAssertion(Annotation( "MP:0001084") "petrosal ganglion") AnnotationAssertion(Annotation( ) Annotation( ) Annotation( ) "petrous ganglion") AnnotationAssertion( "UBERON:0005360") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "inferior glossopharyngeal IX ganglion") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/5/5e/Gray791.png"^^xsd:anyURI) SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (superior glossopharyngeal IX ganglion) AnnotationAssertion(Annotation( ) Annotation( "MP:0001097") "The upper ganglion of the glossopharyngeal nerve[MP]. is situated in the upper part of the groove in which the glossopharyngeal nerve is lodged during its passage through the jugular foramen. It is very small, and is usually regarded as a detached portion of the inferior ganglion.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0000712") AnnotationAssertion( "EHDAA:2842") AnnotationAssertion( "EMAPA:17154") AnnotationAssertion( "FMA:53474") AnnotationAssertion( "MA:0001079") AnnotationAssertion( "VHOG:0000744") AnnotationAssertion(Annotation( "FMA:53474") "Ehrenritter's ganglion") AnnotationAssertion(Annotation( "FMA:53474") "ganglion superius (nervus glossopharyngeus)") AnnotationAssertion(Annotation( "FMA:53474") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "ganglion superius nervus glossopharyngei") AnnotationAssertion(Annotation( "FMA:53474") "glossopharyngeal nerve jugular ganglion") AnnotationAssertion(Annotation( "FMA:53474") "glossopharyngeal nerve superior ganglion") AnnotationAssertion(Annotation( "MP:0001097") "intracranial ganglion") AnnotationAssertion(Annotation( "FMA:53474") "ninth cranial nerve superior ganglion") AnnotationAssertion(Annotation( "FMA:53474") "superior ganglion of glossopharyngeal nerve") AnnotationAssertion(Annotation( "MP:0001097") "superior glossopharyngeal ganglia") AnnotationAssertion(Annotation( "FMA:53474") "superior glossopharyngeal ganglion") AnnotationAssertion(Annotation( "MP:0001097") "superior glossopharyngeal ganglion of the glossopharyngeal (IX) nerve") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "ganglion superius nervi glossopharyngei") AnnotationAssertion(Annotation( "VHOG:0000744") "glossopharyngeal IX superior ganglion") AnnotationAssertion(Annotation( "EMAPA:17154") "glossopharyngeal superior ganglion") AnnotationAssertion(Annotation( "MP:0001097") "jugular ganglion") AnnotationAssertion(Annotation( ) "superior petrosal ganglion") AnnotationAssertion( "UBERON:0005361") AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "Synonym modified from WP original") AnnotationAssertion(rdfs:label "superior glossopharyngeal IX ganglion") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/5/5e/Gray791.png"^^xsd:anyURI) SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (vagus X ganglion) AnnotationAssertion(Annotation( "ISBN:0-683-40008-8"^^xsd:string) Annotation( "MP:0001100") "The group of sensory neuron cell bodies associated with the vagus nerve.") AnnotationAssertion(Annotation( "ZFA:0007067") "gX") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:16798") AnnotationAssertion( "FMA:53472") AnnotationAssertion( "MA:0001081") AnnotationAssertion( "TAO:0007067") AnnotationAssertion( "VHOG:0000684") AnnotationAssertion( "ZFA:0007067") AnnotationAssertion(Annotation( "FMA:53472") "ganglion of vagus nerve") AnnotationAssertion(Annotation( "FMA:53472") "right glossopharyngeal ganglion") AnnotationAssertion(Annotation( "ZFA:0007067") "vagal ganglion") AnnotationAssertion( "vagus ganglion") AnnotationAssertion(Annotation( "FMA:53472") "vagus neural ganglion") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "EMAPA:16798") "vagus X") AnnotationAssertion( "UBERON:0005362") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "vagus X ganglion") SubClassOf(Annotation( "ZFA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (inferior vagus X ganglion) AnnotationAssertion(Annotation( ) Annotation( "ISBN:0-683-40008-8"^^xsd:string) Annotation( "MP:0001087") "The large group of sensory neuron cell bodies, anterior to the jugular vein, associated with the vagus nerve (tenth cranial nerve).") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000685") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "DOI:10.1046/j.1469-7580.2001.19910133.x Graham A. The development and evolution of the pharyngeal arches. J Anat (2001)"^^xsd:string) "These (the epibranchial placodes) are focal thickenings of the embryonic ectoderm that form immediately dorsal and caudal of the clefts between the pharyngeal arches in all vertebrates, and they produce the neuroblasts which migrate and condense to form the distal cranial ganglia: the geniculate, petrosal and nodose ganglia. (...) The one substantial difference between the vertebrate pharyngeal arches and those of the protochordates is the presence of the epibranchial placodes but the evolution of these structures was undoubtedly driven by the endoderm.[well established][VHOG]") AnnotationAssertion(Annotation( "EMAPA:17155") "inferior vagus X") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EFO:0002516") AnnotationAssertion( "EHDAA2:0004622") AnnotationAssertion( "EMAPA:17155") AnnotationAssertion( "FMA:6230") AnnotationAssertion( "MA:0001082") AnnotationAssertion( "MESH:D009620") AnnotationAssertion( "VHOG:0000685") AnnotationAssertion(Annotation( "FMA:6230") "ganglion inferius (nervus vagus)") AnnotationAssertion(Annotation( ) Annotation( ) "ganglion inferius nervi vagi") AnnotationAssertion(Annotation( "FMA:6230") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "ganglion inferius nervus vagi") AnnotationAssertion(Annotation( ) Annotation( ) "ganglion nodosum") AnnotationAssertion(Annotation( "FMA:6230") "inferior ganglion of vagus") AnnotationAssertion(Annotation( "FMA:6230") "inferior ganglion of vagus nerve") AnnotationAssertion(Annotation( "FMA:6230") "nodose ganglion") AnnotationAssertion(Annotation( "FMA:6230") "tenth cranial nerve nodose ganglion") AnnotationAssertion(Annotation( "FMA:6230") "vagus nerve inferior ganglion") AnnotationAssertion(Annotation( "FMA:6230") "vagus nerve nodose ganglion") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "EMAPA:17155") "inferior vagus ganglion") AnnotationAssertion(Annotation( ) "nodose ganglia") AnnotationAssertion(Annotation( "VHOG:0000685") "vagus X inferior ganglion") AnnotationAssertion( "UBERON:0005363") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "inferior vagus X ganglion") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (superior vagus X ganglion) AnnotationAssertion(Annotation( "ISBN:0-683-40008-8"^^xsd:string) Annotation( "MP:0001101") "The upper ganglion of the vagus nerve located at the jugular foramen.") AnnotationAssertion(Annotation( "EMAPA:17156") "superior vagus X") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:17156") AnnotationAssertion( "FMA:6229") AnnotationAssertion( "MA:0001083") AnnotationAssertion( "VHOG:0000686") AnnotationAssertion(Annotation( "FMA:6229") "ganglion superius (nervus vagus)") AnnotationAssertion(Annotation( "FMA:6229") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "ganglion superius nervus vagi") AnnotationAssertion(Annotation( "FMA:6229") "superior ganglion of vagus") AnnotationAssertion(Annotation( "FMA:6229") "superior ganglion of vagus nerve") AnnotationAssertion( "superior vagus ganglion") AnnotationAssertion(Annotation( "FMA:6229") "tenth cranial nerve jugular ganglion") AnnotationAssertion(Annotation( "FMA:6229") "vagus nerve jugular ganglion") AnnotationAssertion(Annotation( "FMA:6229") "vagus nerve superior ganglion") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "EMAPA:17156") "gasserian ganglion") AnnotationAssertion(Annotation( "FMA:6229") "jugular ganglion") AnnotationAssertion(Annotation( "VHOG:0000686") "vagus X superior ganglion") AnnotationAssertion( "UBERON:0005364") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "superior vagus X ganglion") SubClassOf( ) # Class: (olfactory lobe) AnnotationAssertion(Annotation( "UBERON:cjm"^^xsd:string) "The lobe at the anterior part of each cerebral hemisphere, responsible for olfactory functions.") AnnotationAssertion(Annotation( "XAO:0004180") "Part of the telencephalon, comprised of paired anterior outgrowths of either of the cerebral hemispheres in which the olfactory nerve exits. In Xenopus,the olfactory bulbs begin to fuse at NF stage 50, fusion is complete around NF stage 58. The cerebral vein loops around the olfactory bulb by NF stage 43[XAO:0004180].") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000833") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "DOI:10.1111/j.1753-4887.2004.tb00097.x Buck LB, Olfactory receptors and odor coding in mammals. Nutrition Reviews (2008)") "(In mammals) Odorant detection is mediated by millions of olfactory sensory neurons located in the olfactory epithelium lining the nasal cavity. These neurons transmit sensory signals to the olfactory bulb of the brain, which in turn sends signals to the olfactory cortex.[well established][VHOG]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0001362") AnnotationAssertion( "EFO:0000108") AnnotationAssertion( "EHDAA2_RETIRED:0001294") AnnotationAssertion( "EHDAA:5480") AnnotationAssertion( "EMAPA:17778") AnnotationAssertion( "MA:0002413") AnnotationAssertion( "MIAA:0000116") AnnotationAssertion( "NCIT:C33204") AnnotationAssertion(Annotation( "ncithesaurus:Olfactory_Lobe") "UMLS:C0178780") AnnotationAssertion( "VHOG:0000833") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005366") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "olfactory lobe") SubClassOf( ) # Class: (hippocampus granule cell layer) AnnotationAssertion( "TODO - check this. The granule layer is typically in the dentate gyrus, under some definitions of hippocampus, the DG is included, thus making this layer a hippocampal layer") AnnotationAssertion( "EMAPA:35406") AnnotationAssertion( "MA:0000954") AnnotationAssertion( "uberon") AnnotationAssertion( "hippocampus granular layer") AnnotationAssertion( "UBERON:0005367") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "hippocampus granule cell layer") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (hippocampus molecular layer) AnnotationAssertion(Annotation( ) Annotation( ) "The most superficial stratum in the hippocampus. Here the perforant path fibers form synapses onto the distal, apical dendrites of pyramidal cells.") AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:1211") AnnotationAssertion( "EMAPA:35408") AnnotationAssertion( "MA:0000955") AnnotationAssertion(Annotation( "BIRNLEX:1211") "hippocampal molecular layer") AnnotationAssertion( "hippocampus stratum moleculare") AnnotationAssertion(Annotation( ) Annotation( "BIRNLEX:1211") "molecular layer of hippocampus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005368") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "hippocampus molecular layer") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (hippocampus stratum lacunosum) AnnotationAssertion(Annotation( ) Annotation( ) "A thin stratum in the hippocampus that is immediately deep to the molecular layer, and is superficial to the stratum radiatum.") AnnotationAssertion( "Like the SR, contains Schaffer collateral fibers, but it also contains perforant path fibers from the superficial layers of entorhinal cortex") AnnotationAssertion( "EMAPA:35410") AnnotationAssertion( "MA:0000957") AnnotationAssertion( "lacunar layer of hippocampus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005370") AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "Due to its small size, it is often grouped together with stratum moleculare into a single stratum called stratum lacunosum-moleculare[WP]") AnnotationAssertion(rdfs:label "hippocampus stratum lacunosum") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (hippocampus stratum oriens) AnnotationAssertion(Annotation( "BIRNLEX:4113") "Layer that is part of the CA fields of the hippocampus consisting of a narrow relatively cell free layer located deep to the pyramidal cell layer extending through areas CA1, CA2 and CA3. (adapted from Paxinos The rat central nervous system, 2nd ed, Academic Press, San Diego, 1995).") AnnotationAssertion( ) AnnotationAssertion( "BAMS:Or") AnnotationAssertion( "BIRNLEX:4113") AnnotationAssertion( "EMAPA:35412") AnnotationAssertion( "FMA:83893") AnnotationAssertion( "MA:0000958") AnnotationAssertion(Annotation( "BIRNLEX:4113") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=157") AnnotationAssertion(Annotation( "BIRNLEX:4113") "oriens layer of hippocampus") AnnotationAssertion(Annotation( "BIRNLEX:4113") "oriens layer of the hippocampus") AnnotationAssertion(Annotation( "BIRNLEX:4113") "polymorphic layer of hippocampus") AnnotationAssertion(Annotation( "BIRNLEX:4113") "polymorphic layer of the hippocampus") AnnotationAssertion(Annotation( "BIRNLEX:4113") "stratum oriens") AnnotationAssertion(Annotation( "FMA:83893") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "stratum oriens hippocampi") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:157") Annotation( ) "gyrus cuneus") AnnotationAssertion( "UBERON:0005371") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "hippocampus stratum oriens") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (hippocampus stratum radiatum) AnnotationAssertion(Annotation( "BIRNLEX:1298") "The layer located immediately above the pyramidal cell layer in CA2 and CA1 and superficial to the stratum lucidum in CA3. Suprapyramidal region in which CA3 to CA3 associational connections and CA3 to CA1 Schaffer collateral connections are located.") AnnotationAssertion( "contains septal and commissural fibers. It also contains Schaffer collateral fibers, which are the projection forward from CA3 to CA1. Some interneurons that can be found in more superficial layers can also be found here, including basket cells, bistratified cells, and radial trilaminar cells") AnnotationAssertion( ) AnnotationAssertion( "BAMS:Rad") AnnotationAssertion( "BIRNLEX:1298") AnnotationAssertion( "EMAPA:35413") AnnotationAssertion( "FMA:83894") AnnotationAssertion( "MA:0000959") AnnotationAssertion(Annotation( "BIRNLEX:1298") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=158") AnnotationAssertion(Annotation( "FMA:83894") "radiate layer of hippocampus") AnnotationAssertion(Annotation( "BIRNLEX:1298") "stratum radiatum") AnnotationAssertion(Annotation( "FMA:83894") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "stratum radiatum hippocampi") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BAMS:Rad") "stratum radiatum of the hippocampus") AnnotationAssertion( "UBERON:0005372") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "hippocampus stratum radiatum") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (spinal cord dorsal column) AnnotationAssertion(Annotation( "ISBN:0-683-40008-8"^^xsd:string) Annotation( "ISBN:0940780577") Annotation( "MP:0009677") "The wedge-shaped fiber bundle of white matter in the dorsomedial side of the spinal cord that is made up of the fasciculus gracilis and fasciculus cuneatus; it is part of the ascending posterior column-medial lemniscus pathway that is important for well-localized fine touch and conscious proprioception.") AnnotationAssertion( "TODO - relationship with dorsal horn?") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001623") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( ) "The dorsolateral ridge of gray matter in each lateral half of the spinal cord. [TFD][VHOG]") AnnotationAssertion( "The dorsal column is a part of the spinal cord which is responsible for transporting sensory input from the body to the cerebral cortex. This part of the spinal cord is key in perceiving fine touch, such as that used to distinguish textures, along with vibration. The dorsal column also contributes to the body's system of proprioception, used to orient the body in space and to coordinate muscle movements, given information about the body's position") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:dc") AnnotationAssertion( "EV:0100317") AnnotationAssertion( "MA:0002749") AnnotationAssertion( "MBA:514") AnnotationAssertion( "NCIT:C33355") AnnotationAssertion(Annotation( "ncithesaurus:Posterior_Column") "UMLS:C0458459") AnnotationAssertion( "VHOG:0001623") AnnotationAssertion( "dorsal column") AnnotationAssertion( "dorsal column of spinal cord") AnnotationAssertion(Annotation( ) "posterior column") AnnotationAssertion( "spinal cord posterior column") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BAMS:dc") "dorsal column system") AnnotationAssertion(Annotation( "BAMS:dc") "dorsal columns") AnnotationAssertion( "UBERON:0005373") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "spinal cord dorsal column") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses(Annotation( "lexical"^^xsd:string) ) # Class: (spinal cord lateral column) AnnotationAssertion(Annotation( "ISBN:0-683-40008-8"^^xsd:string) Annotation( "MP:0009678") "The region of white matter of the spinal cord that is located between the dorsal and ventral spinal roots.") AnnotationAssertion( "TODO - check relationship between column and funiculus. Also check white vs grey matter. See ventral column. Note also ZFA term 'lateral column' is part of reticular formation") AnnotationAssertion( ) AnnotationAssertion( "EV:0100322") AnnotationAssertion( "MA:0002750") AnnotationAssertion( "TAO:0000531") AnnotationAssertion( "VHOG:0001621") AnnotationAssertion( "ZFA:0000531") AnnotationAssertion( "uberon") AnnotationAssertion( "lateral column") AnnotationAssertion(Annotation( "ZFA:0000531") Annotation( ) "lateral columns") AnnotationAssertion( "UBERON:0005374") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "spinal cord lateral column") SubClassOf( ) SubClassOf(Annotation( "checkme") ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (spinal cord ventral column) AnnotationAssertion(Annotation( "ISBN:0-683-40008-8"^^xsd:string) Annotation( "MP:0009679") "The area of white matter of the spinal cord located on either side of the ventral (anterior) medial fissure.") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001622") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( ) "The ventral ridge of gray matter in each half of the spinal cord. [TFD][VHOG]") AnnotationAssertion(Annotation( "MA"^^xsd:string) "in MA, this is a subclass of white matter, but in WP/Gray's, the anterior column is a synonym of the grey matter section. is this the same as funiculus? See lateral column.") AnnotationAssertion( ) AnnotationAssertion( "EV:0100326") AnnotationAssertion( "MA:0002751") AnnotationAssertion( "VHOG:0001622") AnnotationAssertion( "anterior column") AnnotationAssertion( "spinal cord anterior column") AnnotationAssertion( "ventral column") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005375") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "spinal cord ventral column") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (olfactory bulb external plexiform layer) AnnotationAssertion(Annotation( "NLXANAT:20090403") "Cytoarchitectural part of the olfactory bulb, lying superior to the mitral cell layer and inferior to the glomerular layer. The EPL is mostly neuropil composed almost entirely of mitral and tulfted cell dendrites and granule cell dendrites and their synaptic inputs.") AnnotationAssertion(Annotation( "BTO:0001319") "external plexiform layer") AnnotationAssertion( "BAMS:EPl") AnnotationAssertion( "BTO:0001319") AnnotationAssertion( "DMBA:15913") AnnotationAssertion( "EMAPA:35607") AnnotationAssertion( "MA:0000969") AnnotationAssertion( "NLXANAT:20090403") AnnotationAssertion(Annotation( "NLXANAT:20090403") "olfactory bulb main external plexiform layer") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0001319") Annotation( ) "EPL") AnnotationAssertion(Annotation( "DMBA:OB-Opl") "OB outer plexiform layer") AnnotationAssertion(Annotation( "BAMS:EPl") "external plexiform layer of the olfactory bulb") AnnotationAssertion( "UBERON:0005376") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "olfactory bulb external plexiform layer") SubClassOf( ) # Class: (olfactory bulb glomerular layer) AnnotationAssertion(Annotation( ) Annotation( "BTO:0001317") "The glomerular layer is the most superficial layer, consisting of mitral cell dendritic arborizations (glomeruli), olfactory nerve fibers, and periglomerular cells. Periglomerular cells contact multiple mitral cell dendrites within the glomeruli and provide lateral inhibition of neighboring glomeruli while allowing excitation of a specific mitral cell dendritic tree. Each mitral cell is contacted by at least 1000 olfactory nerve fibers[BTO]. Portion of tissue which is located in between the primary olfactory fiber layer and the external cellular layer of the olfactory bulb[ZFA].") AnnotationAssertion(Annotation( "BTO:0001317") Annotation( "ZFA:0000357") "glomerular layer") AnnotationAssertion( ) AnnotationAssertion( "BAMS:Gl") AnnotationAssertion( "BTO:0001317") AnnotationAssertion( "DHBA:11327") AnnotationAssertion( "EMAPA:35608") AnnotationAssertion( "MA:0000970") AnnotationAssertion( "MBA:212") AnnotationAssertion( "NLXANAT:1005007") AnnotationAssertion( "TAO:0000357") AnnotationAssertion( "ZFA:0000357") AnnotationAssertion(Annotation( "NLXANAT:1005007") "olfactory bulb main glomerulus") AnnotationAssertion(Annotation( "ZFA:0000357") "stratum glomerulosum bulbi olfactorii") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BAMS:Gl") "glomerular layer of the olfactory bulb") AnnotationAssertion( "UBERON:0005377") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "olfactory bulb glomerular layer") SubClassOf( ) # Class: (olfactory bulb granule cell layer) AnnotationAssertion(Annotation( "BTO:0001327") "The granule cell layer contains multiple small round neurons that lack axons. Long dendritic processes of the neurons reach the more superficial layers and inhibit mitral cells and tufted cells. Small distal processes make contacts with the exiting mitral cell axons.") AnnotationAssertion(Annotation( "BTO:0001327") "granule cell layer") AnnotationAssertion( ) AnnotationAssertion( "BAMS:MOBgr") AnnotationAssertion( "BTO:0001327") AnnotationAssertion( "DMBA:15909") AnnotationAssertion( "EMAPA:35609") AnnotationAssertion( "MA:0000971") AnnotationAssertion( "MBA:220") AnnotationAssertion( "NLXANAT:20090404") AnnotationAssertion(Annotation( "NLXANAT:20090404") "olfactory bulb main granule cell layer") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BAMS:gr") "accessory olfactory bulb granule cell layer") AnnotationAssertion(Annotation( "NLXANAT:20090404") "granule layer of main olfactory bulb") AnnotationAssertion(Annotation( "BAMS:MOBgr") "main olfactory bulb granule cell layer") AnnotationAssertion(Annotation( "BAMS:gr") "main olfactory bulb granule cell layer") AnnotationAssertion(Annotation( "BAMS:MOBgr") "main olfactory bulb, granule layer") AnnotationAssertion( "UBERON:0005378") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "olfactory bulb granule cell layer") SubClassOf( ) # Class: (olfactory bulb internal plexiform layer) AnnotationAssertion( ) AnnotationAssertion( "BAMS:IPl") AnnotationAssertion( "BTO:0001320") AnnotationAssertion( "DHBA:11330") AnnotationAssertion( "DMBA:15910") AnnotationAssertion( "EMAPA:35610") AnnotationAssertion( "MA:0000972") AnnotationAssertion( "MBA:228") AnnotationAssertion(Annotation( "BTO:0001320") "internal plexiform layer") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:2713") "inner plexiform layer of the main olfactory bulb") AnnotationAssertion( "internal plexiform layer of olfactory bulb") AnnotationAssertion(Annotation( "BAMS:IPl") "internal plexiform layer of the olfactory bulb") AnnotationAssertion(Annotation( "NeuroNames:2713") "main olfactory bulb, inner plexiform layer") AnnotationAssertion( "UBERON:0005379") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "olfactory bulb internal plexiform layer") SubClassOf( ) # Class: (olfactory bulb subependymal zone) AnnotationAssertion(Annotation( "MGI:csmith"^^xsd:string) Annotation( "MP:0009952") "The region of mitotically active layer of cells surrounding the lateral brain ventricles that consists of migrating neuroblasts, astrocytes and transitory amplifying progenitor cells, that produce neurons that migrate to the olfactory bulb.") AnnotationAssertion( "EMAPA:35612") AnnotationAssertion( "MA:0000974") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005380") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "olfactory bulb subependymal zone") SubClassOf( ) # Class: (dentate gyrus granule cell layer) AnnotationAssertion(Annotation( "BIRNLEX:4129") "Granule cell layer is also called the DG principal cell layer. This one of the three layers of dentate gyrus that lies deep to the molecular layer and is made of densely packed layer that is four to eight granule cells thick.") AnnotationAssertion( ) AnnotationAssertion( "BAMS:DG-sg") AnnotationAssertion( "BAMS:GrDG") AnnotationAssertion( "BAMS:sg") AnnotationAssertion( "BIRNLEX:4129") AnnotationAssertion( "DMBA:16122") AnnotationAssertion( "EMAPA:35276") AnnotationAssertion( "FMA:83146") AnnotationAssertion( "MA:0000946") AnnotationAssertion( "MBA:632") AnnotationAssertion(Annotation( "BIRNLEX:4129") "DG granule cell layer") AnnotationAssertion(Annotation( "FMA:83146") "granular layer of dentate gyrus") AnnotationAssertion(Annotation( "FMA:83146") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "stratum granulare gyri dentati") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BAMS:DG-sg") "dentate gyrus, granule cell layer") AnnotationAssertion(Annotation( "BAMS:GrDG") "granular layer of the dentate gyrus") AnnotationAssertion( "UBERON:0005381") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "dentate gyrus granule cell layer") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (dorsal striatum) AnnotationAssertion(Annotation( "NLXANAT:1010001") "Dorsal components of the striatum comprising the caudate nucleus and the putamen, in species that have distinct nuclei; the caudoputamen in species which don't.") AnnotationAssertion(Annotation( ) "According to BrainInfo it is a part of the basal ganglia comprising the globus pallidus and striatum") AnnotationAssertion(Annotation( ) "According to the 1917 version of Gray's Anatomy, it is the combination of the lentiform nucleus (putamen and the globus pallidus) and the caudate nucleus") AnnotationAssertion(Annotation( ) "It may also refer to both the basal ganglia and the internal capsule collectively.") AnnotationAssertion(Annotation( ) "It may also refer to the putamen and caudate collectively.") AnnotationAssertion(Annotation( ) "The term dorsal striatum refers to a composite structure of the endbrain that is defined in the striatopallidal system by connectivity and neurochemical staining. It includes most of the striatum ( Heimer-1995 ). The boundary between this structure and the ventral striatum is indistinct in sections stained for Nissl substance.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:Dorsal_striatum") AnnotationAssertion( "BAMS:STRd") AnnotationAssertion( "BAMS:StrD") AnnotationAssertion( "BTO:0004701") AnnotationAssertion( "EMAPA:36575") AnnotationAssertion( "FMA:77620") AnnotationAssertion( "MA:0002971") AnnotationAssertion( "MBA:485") AnnotationAssertion( "NLXANAT:1010001") AnnotationAssertion( "PBA:10081") AnnotationAssertion(Annotation( "ABA:STRd") "striatum dorsal region") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NLXANAT:100312") "caudoputamen") AnnotationAssertion(Annotation( ) "corpus striatum") AnnotationAssertion(Annotation( "BTO:0004701") "dorsal basal ganglia") AnnotationAssertion(Annotation( "BTO:0004701") "dorsal basal ganglion") AnnotationAssertion(Annotation( ) "striated body") AnnotationAssertion(Annotation( "BTO:0004701") "striatum dorsale") AnnotationAssertion( "UBERON:0005382") AnnotationAssertion(rdfs:label "dorsal striatum") SubClassOf( ) SubClassOf(Annotation( "NIFSTD"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (caudate-putamen) AnnotationAssertion(Annotation( "NLXANAT:100312") "Regional part of telencephalon in some species, e.g., rodent, equivalent to the dorsal striatum (caudate nucleus and putamen). Unlike the dorsal striatum of primates, for example, the caudoputamen is not split into separate nuclei by the fibers of the internal capsule. Rather, the internal capsule splits into fiber bundles which course through the structure.") AnnotationAssertion( "check - rodents. The caudate nucleus and putamen are separated by a clear white matter bundle in most species but not in rodents (MM)") AnnotationAssertion( "we do not currently place rodent-specific taxon constraints here as this would cause taxon violations. There is an argument for merging this into dorsal striatum and treating the distinction as phenotypic") AnnotationAssertion( "In the human, histologically the caudate nucleus and putamen are identically and share a common embryological origin[ISBN:0123813611]") AnnotationAssertion( "BAMS:CP") AnnotationAssertion( "BAMS:CPu") AnnotationAssertion( "BM:Tel-C-Pu") AnnotationAssertion( "BTO:0000212") AnnotationAssertion( "EFO:0001912") AnnotationAssertion( "EMAPA:19095") AnnotationAssertion( "MA:0000893") AnnotationAssertion( "MBA:672") AnnotationAssertion( "NLXANAT:100312") AnnotationAssertion( "caudate putamen") AnnotationAssertion(Annotation( "NLXANAT:100312") "caudateputamen") AnnotationAssertion(Annotation( "NLXANAT:100312") "caudoputamen") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NLXANAT:100312") "caudate putamen") AnnotationAssertion(Annotation( "BAMS:CPu") "caudate putamen (striatum)") AnnotationAssertion(Annotation( "NLXANAT:100312") "caudate-putamen") AnnotationAssertion(Annotation( "NLXANAT:100312") "caudateputamen") AnnotationAssertion(Annotation( "NLXANAT:100312") "dorsal striatum") AnnotationAssertion(Annotation( "NLXANAT:100312") "neostriatum") AnnotationAssertion(Annotation( "NLXANAT:100312") "striatum") AnnotationAssertion( "UBERON:0005383") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "caudate-putamen") SubClassOf( ) SubClassOf(Annotation( "MA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (nasal cavity epithelium) AnnotationAssertion(Annotation( ) "An epithelium that lines the nasal cavity.") AnnotationAssertion( "this class may in future be split into the embryonic precursor of the oronasal membrane and the structure that is part of the mucosa in the developed organism") AnnotationAssertion( ) AnnotationAssertion( "CALOHA:TS-0656") AnnotationAssertion( "EHDAA2:0001227") AnnotationAssertion( "EHDAA:6803") AnnotationAssertion( "EMAPA:17605") AnnotationAssertion( "FMA:63140") AnnotationAssertion( "MA:0001324") AnnotationAssertion( "NCIT:C49261") AnnotationAssertion(Annotation( "ncithesaurus:Nasal_Cavity_Epithelium") "UMLS:C1709151") AnnotationAssertion( "VHOG:0000501") AnnotationAssertion(Annotation( "FMA:63140") "nasal epithelium") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "MA:0001324") "nasal mucosa") AnnotationAssertion( "UBERON:0005384") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "nasal cavity epithelium") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (nasal cavity respiratory epithelium) AnnotationAssertion(Annotation( ) Annotation( "OBOL:automatic"^^xsd:string) "An epithelium that is part of the respiratory segment of the nasal mucosa [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0001230") AnnotationAssertion( "EHDAA:6807") AnnotationAssertion( "EMAPA:17607") AnnotationAssertion( "MA:0001326") AnnotationAssertion( "NCIT:C49262") AnnotationAssertion(Annotation( "ncithesaurus:Nasal_Cavity_Respiratory_Epithelium") "UMLS:C1709152") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005385") AnnotationAssertion(rdfs:label "nasal cavity respiratory epithelium") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (olfactory segment of nasal mucosa) AnnotationAssertion(Annotation( ) Annotation( "MESH:A04.531.520.573") "That portion of the nasal mucosa containing the sensory endings for olfaction; the organ of smell[MESH].") AnnotationAssertion(Annotation( ) "The olfactory mucosa is located in the upper region of the nasal cavity and is made up of the olfactory epithelium and the underlying lamina propria, connective tissue containing fibroblasts, blood vessels, Bowman's glands and bundles of fine axons from the olfactory neurons. The mucus protects the olfactory epithelium and allows odors to dissolve so that they can be detected by olfactory receptor neurons. Electron microscopy studies show that Bowman's glands contain cells with large secretory vesicles. The exact composition of the secretions from Bowman's glands is unclear, but there is evidence that Bowman's glands do not produce odorant binding protein[WP][Wikipedia:Olfactory_mucosa].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "CALOHA:TS-2197") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37918") AnnotationAssertion( "FMA:77199") AnnotationAssertion( "GAID:303") AnnotationAssertion( "MESH:D009831") AnnotationAssertion( "NCIT:C33205") AnnotationAssertion(Annotation( "ncithesaurus:Olfactory_Mucosa") "UMLS:C0028937") AnnotationAssertion(Annotation( "FMA:77199") "olfactory area of nasal mucosa") AnnotationAssertion( "olfactory mucosa") AnnotationAssertion(Annotation( "FMA:77199") "olfactory part of nasal mucosa") AnnotationAssertion(Annotation( "FMA:77199") "olfactory zone of nasal mucosa") AnnotationAssertion(Annotation( "FMA:77199") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "pars olfactoria tunicae mucosae nasi") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "pars olfactoria tunicae mucosae nasi") AnnotationAssertion( "UBERON:0005386") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "olfactory segment of nasal mucosa") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses( ) # Class: (olfactory glomerulus) AnnotationAssertion(Annotation( ) Annotation( "Dorlands_Medical_Dictionary:MerckMedicus") "One of the small globular masses of dense neuropil in the olfactory bulb, containing the first synapse in the olfactory pathway[BTO].") AnnotationAssertion(Annotation( "ZFA:0005661") Annotation( "ZFIN:ZDB-PUB-120516-14") "Multi-tissue structure part of the olfactory bulb that is roughly spheroidal and encircled by olfactory sensory neuron axons that formed an anatomically distinct stalk connected to the olfactory nerve[ZFA].") AnnotationAssertion( "UBERON:0011916") AnnotationAssertion( ) AnnotationAssertion( "BTO:0003653") AnnotationAssertion( "NIF_Subcellular:nlx_subcell_20090503") AnnotationAssertion( "ZFA:0005661") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "glomerulus of olfactory bulb") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "olfactory bulb glomerulus") AnnotationAssertion(Annotation( ) "olfactory glomeruli") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005387") AnnotationAssertion(rdfs:label "olfactory glomerulus") SubClassOf( ) SubClassOf(Annotation( "ZFA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (photoreceptor array) AnnotationAssertion(Annotation( ) "An array of photoreceptors and any supporting cells found in an eye.") AnnotationAssertion( "FBbt:00004200") AnnotationAssertion( "light-sensitive tissue") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005388") AnnotationAssertion(rdfs:label "photoreceptor array") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (transparent eye structure) AnnotationAssertion(Annotation( ) "A transparent structure that is part of a visual sense organ, the function of which is to direct or focus light onto a photoreceptor array.") AnnotationAssertion( "directing or focusing light onto light receptors") AnnotationAssertion( "lens") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005389") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "transparent eye structure") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (cortical layer I) AnnotationAssertion(Annotation( "NLXANAT:090807") "The most superficial layer of the neocortex characterized by a paucity of cell bodies.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "ABA:CTX1") AnnotationAssertion( "BTO:0004906") AnnotationAssertion( "EMAPA:35255") AnnotationAssertion( "FMA:83900") AnnotationAssertion( "MA:0000897") AnnotationAssertion( "NCIT:C33137") AnnotationAssertion( "NLXANAT:090807") AnnotationAssertion( "PBA:294021786") AnnotationAssertion(Annotation( "ncithesaurus:Molecular_Layer") "UMLS:C1709063") AnnotationAssertion(Annotation( "ABA:CTX1") "cerebral cortex, layer 1") AnnotationAssertion(Annotation( "FMA:83900") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "lamina molecularis isocorticis [lamina I]") AnnotationAssertion(Annotation( "NLXANAT:090807") "layer 1 of neocortex") AnnotationAssertion(Annotation( "NLXANAT:090807") "layer I of neocortex") AnnotationAssertion(Annotation( "ncithesaurus:Molecular_layer") "molecular layer of cerebral cortex") AnnotationAssertion(Annotation( "FMA:83900") "molecular layer of isocortex [layer i]") AnnotationAssertion(Annotation( "FMA:83900") "molecular layer of neocortex") AnnotationAssertion(Annotation( "NLXANAT:090807") "molecular layer of neocortex") AnnotationAssertion(Annotation( "NLXANAT:090807") "neocortex layer 1") AnnotationAssertion(Annotation( "NLXANAT:090807") "neocortex layer I") AnnotationAssertion(Annotation( "NLXANAT:090807") "neocortex molecular layer") AnnotationAssertion(Annotation( "NLXANAT:090807") "neocortex plexiform layer") AnnotationAssertion(Annotation( "NLXANAT:090807") "plexiform layer of neocortex") AnnotationAssertion( "uberon") AnnotationAssertion( "molecular layer") AnnotationAssertion( "plexiform layer") AnnotationAssertion( "UBERON:0005390") AnnotationAssertion(rdfs:label "cortical layer I") SubClassOf( ) SubClassOf(Annotation( "NBK10047") ObjectSomeValuesFrom( )) # Class: (cortical layer II) AnnotationAssertion(Annotation( "NLXANAT:090808") "Layer of neocortex lying just deep to molecular layer characterized by numerous small cell bodies.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "ABA:CTX2") AnnotationAssertion( "EMAPA:35256") AnnotationAssertion( "FMA:77804") AnnotationAssertion( "MA:0000898") AnnotationAssertion( "NCIT:C32557") AnnotationAssertion( "NLXANAT:090808") AnnotationAssertion( "PBA:294021800") AnnotationAssertion(Annotation( "ncithesaurus:External_Granular_Layer") "UMLS:C1517039") AnnotationAssertion(Annotation( "ABA:CTX2") "cerebral cortex, layer 2") AnnotationAssertion(Annotation( "FMA:77804") "external granular layer of isocortex [layer II]") AnnotationAssertion(Annotation( "FMA:77804") "external granular layer of neocortex") AnnotationAssertion(Annotation( "NLXANAT:090808") "external granule cell layer of neocortex") AnnotationAssertion(Annotation( "FMA:77804") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "lamina granularis externa isocorticis [lamina ii]") AnnotationAssertion(Annotation( "NLXANAT:090808") "layer II of neocortex") AnnotationAssertion(Annotation( "NLXANAT:090808") "neocortex layer 2") AnnotationAssertion(Annotation( "NLXANAT:090808") "neocortex layer II") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "EGL") AnnotationAssertion( "external granular cell layer") AnnotationAssertion( "external granular layer") AnnotationAssertion( "external granular layer of cerebral cortex") AnnotationAssertion( "external granule cell layer") AnnotationAssertion( "granule cell layer of cerebral cortex") AnnotationAssertion( "UBERON:0005391") AnnotationAssertion(rdfs:label "cortical layer II") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "BRAINSPAN") ObjectSomeValuesFrom( )) # Class: (cortical layer III) AnnotationAssertion(Annotation( "NLXANAT:090809") "Layer of neocortex lying deep to the external granule cell layer defined cytoarchitecturally by numerous small pyramidal neurons.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "ABA:CTX3") AnnotationAssertion( "EMAPA:35257") AnnotationAssertion( "FMA:77810") AnnotationAssertion( "MA:0000899") AnnotationAssertion( "NCIT:C32571") AnnotationAssertion( "NLXANAT:090809") AnnotationAssertion( "PBA:294021824") AnnotationAssertion(Annotation( "ncithesaurus:External_Pyramidal_Cell_Layer") "UMLS:C1517046") AnnotationAssertion(Annotation( "ABA:CTX3") "cerebral cortex, layer 3") AnnotationAssertion(Annotation( "FMA:77810") "external pyramidal cell layer") AnnotationAssertion(Annotation( "NLXANAT:090809") "external pyramidal cell layer of neocortex") AnnotationAssertion(Annotation( "FMA:77810") "external pyramidal layer of isocortex [layer iii]") AnnotationAssertion(Annotation( "FMA:77810") "external pyramidal layer of neocortex") AnnotationAssertion(Annotation( "FMA:77810") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "lamina pyramidalis externa isocorticis [lamina iii]") AnnotationAssertion(Annotation( "NLXANAT:090809") "layer 3 of neocortex") AnnotationAssertion(Annotation( "NLXANAT:090809") "layer III of neocortex") AnnotationAssertion(Annotation( "NLXANAT:090809") "neocortex external pyramidal cell layer") AnnotationAssertion(Annotation( "NLXANAT:090809") "neocortex layer 3") AnnotationAssertion(Annotation( "NLXANAT:090809") "neocortex layer III") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "ncithesaurus:External_Pyramidal_Cell_Layer") "external pyramidal layer of cerebral cortex") AnnotationAssertion(Annotation( "NeuroNames:2448") "isocortex, deep supragranular pyramidal layer") AnnotationAssertion(Annotation( "NeuroNames:2448") Annotation( ) "lamina pyramidalis externa") AnnotationAssertion(Annotation( "NeuroNames:2448") "layer of medium-sized and large pyramidal cells") AnnotationAssertion( "pyramidal layer") AnnotationAssertion( "UBERON:0005392") AnnotationAssertion(rdfs:label "cortical layer III") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "BRAINSPAN") ObjectSomeValuesFrom( )) # Class: (cortical layer IV) AnnotationAssertion(Annotation( "NLXANAT:090810") "Layer of neocortex lying deep to the external pyramidal cell layer defined cytoarchitecturally by the presence of numerous small cells.") AnnotationAssertion(Annotation( ) "...") AnnotationAssertion(Annotation( "ISBN:0471888893"^^xsd:string) "Relatively undeveloped in some mammals such as the tenrec.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "ABA:CTX4") AnnotationAssertion( "EMAPA:35258") AnnotationAssertion( "FMA:77811") AnnotationAssertion( "MA:0000900") AnnotationAssertion( "NCIT:C32844") AnnotationAssertion( "NLXANAT:090810") AnnotationAssertion( "PBA:294021852") AnnotationAssertion(Annotation( "ncithesaurus:Internal_Granular_Layer") "UMLS:C1512872") AnnotationAssertion(Annotation( "ABA:CTX4") "cerebral cortex, layer 4") AnnotationAssertion(Annotation( "FMA:77811") "internal granular layer of isocortex [layer iv]") AnnotationAssertion(Annotation( "FMA:77811") "internal granular layer of neocortex") AnnotationAssertion(Annotation( "NLXANAT:090810") "internal granule cell layer of neocortex") AnnotationAssertion(Annotation( "FMA:77811") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "lamina granularis interna isocorticis [lamina iv]") AnnotationAssertion(Annotation( "NLXANAT:090810") "layer 4 of neocortex") AnnotationAssertion(Annotation( "NLXANAT:090810") "layer IV of neocortex") AnnotationAssertion(Annotation( "NLXANAT:090810") "neocortex internal granule cell layer") AnnotationAssertion(Annotation( "NLXANAT:090810") "neocortex layer 4") AnnotationAssertion(Annotation( "NLXANAT:090810") "neocortex layer IV") AnnotationAssertion(Annotation( "NLXANAT:090810") "neocortical internal granule cell layer") AnnotationAssertion(Annotation( "NLXANAT:090810") "neocortical layer IV") AnnotationAssertion( "uberon") AnnotationAssertion( "internal granular layer") AnnotationAssertion( "UBERON:0005393") AnnotationAssertion(rdfs:label "cortical layer IV") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "BRAINSPAN") ObjectSomeValuesFrom( )) # Class: (cortical layer V) AnnotationAssertion(Annotation( "NLXANAT:090811") "Layer of neocortex lying deep to the internal granule cell layer (layer 4) defined cytoarchitecturally by the predominance of large pyramidal cell bodies.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "ABA:CTX5") AnnotationAssertion( "EMAPA:35259") AnnotationAssertion( "FMA:77812") AnnotationAssertion( "MA:0000901") AnnotationAssertion( "NCIT:C32653") AnnotationAssertion( "NLXANAT:090811") AnnotationAssertion( "PBA:294021878") AnnotationAssertion(Annotation( "ncithesaurus:Ganglionic_Layer") "UMLS:C1517447") AnnotationAssertion(Annotation( "FMA:77812") "betz' cells") AnnotationAssertion(Annotation( "ABA:CTX5") "cerebral cortex, layer 5") AnnotationAssertion(Annotation( "NLXANAT:090811") "internal pyramidal cell layer of neocortex") AnnotationAssertion(Annotation( "FMA:77812") "internal pyramidal layer of isocortex [layer v]") AnnotationAssertion(Annotation( "FMA:77812") "internal pyramidal layer of neocortex") AnnotationAssertion(Annotation( "FMA:77812") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "lamina pyramidalis interna isocorticis [lamina v]") AnnotationAssertion(Annotation( "NLXANAT:090811") "layer 5 of neocortex") AnnotationAssertion(Annotation( "NLXANAT:090811") "layer V of neocortex") AnnotationAssertion(Annotation( "NLXANAT:090811") "neocortex internal pyramidal cell layer") AnnotationAssertion(Annotation( "NLXANAT:090811") "neocortex layer 5") AnnotationAssertion(Annotation( "NLXANAT:090811") "neocortex layer V") AnnotationAssertion(Annotation( "NLXANAT:090811") "neocortical layer 5") AnnotationAssertion(Annotation( "NLXANAT:090811") "neocortical layer V") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:2450") "deep layer of large pyramidal cells") AnnotationAssertion( "ganglionic layer") AnnotationAssertion( "ganglionic layer of cerebral cortex") AnnotationAssertion(Annotation( "NeuroNames:2450") "inner layer of large pyramidal cells") AnnotationAssertion(Annotation( "NeuroNames:2450") "internal pyramidal layer") AnnotationAssertion(Annotation( "NeuroNames:2450") "isocortex, infragranular pyramidal layer") AnnotationAssertion(Annotation( "NeuroNames:2450") Annotation( ) "lamina ganglionaris") AnnotationAssertion(Annotation( "NeuroNames:2450") Annotation( ) "lamina pyramidalis interna") AnnotationAssertion( "UBERON:0005394") AnnotationAssertion(rdfs:label "cortical layer V") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "BRAINSPAN") ObjectSomeValuesFrom( )) # Class: (cortical layer VI) AnnotationAssertion(Annotation( "NLXANAT:090812") "Innermost layer of neocortex lying deep to the internal pyramidal cell layer defined cytoarchitecturally by cells of varying size.") AnnotationAssertion( ) AnnotationAssertion( "ABA:CTX6") AnnotationAssertion( "EMAPA:35260") AnnotationAssertion( "FMA:77805") AnnotationAssertion( "MA:0000902") AnnotationAssertion( "NLXANAT:090812") AnnotationAssertion( "PBA:294021896") AnnotationAssertion(Annotation( "ABA:CTX6") "cerebral cortex, layer 6") AnnotationAssertion(Annotation( "FMA:77805") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "lamina multiformis isocorticis [lamina vi]") AnnotationAssertion(Annotation( "NLXANAT:090812") "layer VI of neocortex") AnnotationAssertion(Annotation( "FMA:77805") "multiform layer of isocortex [layer vi]") AnnotationAssertion(Annotation( "FMA:77805") "multiform layer of neocortex") AnnotationAssertion(Annotation( "NLXANAT:090812") "multiform layer of neocortex") AnnotationAssertion(Annotation( "NLXANAT:090812") "neocortex layer 6") AnnotationAssertion(Annotation( "NLXANAT:090812") "neocortex layer VI") AnnotationAssertion(Annotation( "NLXANAT:090812") "neocortex multiform layer") AnnotationAssertion(Annotation( "NLXANAT:090812") "neocortical layer 6") AnnotationAssertion(Annotation( "NLXANAT:090812") "neocortical layer VI") AnnotationAssertion(Annotation( "NLXANAT:090812") "pleiomorphic layer of neocortex") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:2451") "fusiform layer") AnnotationAssertion(Annotation( "NeuroNames:2451") "isocortex, polymorph layer") AnnotationAssertion(Annotation( "NeuroNames:2451") Annotation( ) "lamina multiformis") AnnotationAssertion(Annotation( "NeuroNames:2451") "multiform layer") AnnotationAssertion(Annotation( "NeuroNames:2451") "spindle cell layer") AnnotationAssertion( "UBERON:0005395") AnnotationAssertion(rdfs:label "cortical layer VI") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (carotid artery segment) AnnotationAssertion(Annotation( ) Annotation( ) "One of: the common carotid artery, or its branches, the external and internal carotid arteries.") AnnotationAssertion( "This is a generic grouping class that is the superclass of the trunks/branches of the common carotid artery. Note that AOs vary widely in how they divide up and generalize arteries") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0000097") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "Artery originating at the junction of the first two aortic arches and supplying the anterior brain. Kimmel et al, 1995.[TAO]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010217") AnnotationAssertion( "BTO:0000168") AnnotationAssertion( "CALOHA:TS-0116") AnnotationAssertion( "EFO:0000818") AnnotationAssertion( "EHDAA:6385") AnnotationAssertion( "EMAPA:18609") AnnotationAssertion( "EV:0100379") AnnotationAssertion( "FMA:70504") AnnotationAssertion( "GAID:478") AnnotationAssertion( "MA:0001925") AnnotationAssertion( "MAT:0000501") AnnotationAssertion( "MESH:D002339") AnnotationAssertion( "NCIT:C12687") AnnotationAssertion( "OpenCyc:Mx4rvg7rcJwpEbGdrcN5Y29ycA") AnnotationAssertion( "TAO:0000097") AnnotationAssertion(Annotation( "ncithesaurus:Carotid_Artery") "UMLS:C0007272") AnnotationAssertion( "VHOG:0000266") AnnotationAssertion( "ZFA:0000097") AnnotationAssertion( "galen:CarotidArtery") AnnotationAssertion(Annotation( "AAO:0010217") "carotid") AnnotationAssertion(Annotation( "MA:0001925") "carotid artery") AnnotationAssertion(Annotation( "FMA:70504") "subdivision of common carotid artery") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:70504") "common carotid arterial subdivision") AnnotationAssertion( "UBERON:0005396") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "carotid artery segment") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (brain arachnoid mater) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An arachnoid mater that surrounds a brain.") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000230") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( ) "The middle membrane of the three mammalian meninges covering the brain and spinal cord. [TFD][VHOG]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000230") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0072528305 Kardong KV, Vertebrates: Comparative Anatomy, Function, Evolution (2006) p.639"^^xsd:string) "In fishes, the meninges consist of a single membrane, the primitive meninx, wrapped around the brain and spinal cord. With the adoption of terrestrial life, the meninges doubled. In amphibians, reptiles, and birds, the meninges include a thick outer dura mater derived from mesoderm and a thin inner secondary meninx. (...) In mammals, the dura mater persists, but division of the secondary meninx yields both the arachnoid and the pia mater from ectomesoderm.[well established][VHOG]") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:32661") AnnotationAssertion( "FMA:83981") AnnotationAssertion( "MA:0000814") AnnotationAssertion( "NCIT:C49331") AnnotationAssertion( "VHOG:0000230") AnnotationAssertion(Annotation( "FMA:83981") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "arachnoidea mater cranialis") AnnotationAssertion(Annotation( "FMA:83981") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "arachnoidea mater encephali") AnnotationAssertion(Annotation( "MA:0000814") "brain arachnoid matter") AnnotationAssertion(Annotation( "FMA:83981") "cranial arachnoid mater") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005397") AnnotationAssertion(rdfs:label "brain arachnoid mater") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (female reproductive gland) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A sex gland that is part of a female reproductive system.") AnnotationAssertion( "BTO:0000254") AnnotationAssertion( "MA:0000383") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005398") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "female reproductive gland") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (male reproductive gland) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A sex gland that is part of a male reproductive system.") AnnotationAssertion( "BTO:0000080") AnnotationAssertion( "EMAPA:19285") AnnotationAssertion( "MA:0000399") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "EMAPA:19285") "accessory sex gland") AnnotationAssertion( "UBERON:0005399") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "male reproductive gland") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (telencephalon arachnoid mater) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An arachnoid mater that is part of a telencephalon.") AnnotationAssertion( "EMAPA:17775") AnnotationAssertion( "MA:0000980") AnnotationAssertion(Annotation( "MA:0000980") "telencephalon arachnoid matter") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005400") AnnotationAssertion(rdfs:label "telencephalon arachnoid mater") SubClassOf( ) SubClassOf( ) # Class: (cerebral hemisphere gray matter) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A gray matter that is part of a cerebral hemisphere.") AnnotationAssertion(Annotation( "BTO"^^xsd:string) "BTO may actually be a more generic structure; FMA may represent a more specific structure. Consider merging with gray matter of telencephalon") AnnotationAssertion( "BTO:0000823") AnnotationAssertion( "CALOHA:TS-2361") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37477") AnnotationAssertion( "FMA:61821") AnnotationAssertion( "MA:0000944") AnnotationAssertion(Annotation( "BTO:0000823") "cerebral gray matter") AnnotationAssertion(Annotation( "MA:0000944") "cerebral grey matter") AnnotationAssertion( "cerebral hemisphere grey matter") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005401") AnnotationAssertion(rdfs:label "cerebral hemisphere gray matter") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (philtrum) AnnotationAssertion(Annotation( ) Annotation( "MGI:anna"^^xsd:string) Annotation( "MP:0012256") "The vertical groove found on the median line of the upper lip, extending to the nose.") AnnotationAssertion( "vestigial in humans. In humans, the philtrum is formed where the nasomedial and maxillary processes meet during embryonic development (colloquially known as Hulse lines). When these processes fail to fuse fully in humans, a cleft lip (sometimes called a 'hare lip') can result. A flattened or smooth philtrum can be a symptom of fetal alcohol syndrome or Prader-Willi syndrome") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0001462") AnnotationAssertion( "EHDAA:9280") AnnotationAssertion( "EMAPA:17926") AnnotationAssertion( "FMA:59819") AnnotationAssertion( "MA:0001577") AnnotationAssertion( "VHOG:0000862") AnnotationAssertion(Annotation( "MA:0001577") "lip philtrum") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "infranasal depression") AnnotationAssertion(Annotation( ) "medial cleft") AnnotationAssertion(Annotation( "FMA:59819") "philtral region of upper lip") AnnotationAssertion( "UBERON:0005402") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "philtrum") SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ) SubClassOf( ) SubClassOf(Annotation( "EMAPA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "Wikipedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (ventral striatum) AnnotationAssertion(Annotation( "NLX:57107") "A composite structure of the telencephalon that is defined in the striatopallidal system by connectivity and neurochemical staining. It includes the nucleus accumbens, the most ventral portions of the caudate nucleus and the putamen, the rostrolateral portion of the anterior perforated substance, the islands of Calleja and a rostral subcommissural portion of substantia innominata. The boundary between the ventral striatum and dorsal striatum is indistinct in sections stained for Nissl substance (Heimer-1995; adapted from Brain Info).") AnnotationAssertion(Annotation( ) "The term ventral striatum refers to a composite structure of the endbrain that is defined in the striatopallidal system by connectivity and neurochemical staining. It includes the nucleus accumbens, the most ventral portions of the caudate nucleus and the putamen, the rostrolateral portion of the olfactory tubercle, the islands of Calleja and a rostral subcommissural portion of substantia innominata. The boundary between the ventral striatum and dorsal striatum is indistinct in sections stained for Nissl substance ( Heimer-1995 ).") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:STRv") AnnotationAssertion( "BAMS:StrV") AnnotationAssertion( "BAMS:Ventral_striatum") AnnotationAssertion( "BTO:0004702") AnnotationAssertion( "DMBA:15858") AnnotationAssertion( "EFO:0001936") AnnotationAssertion( "EMAPA:36576") AnnotationAssertion( "FMA:77614") AnnotationAssertion( "MA:0002972") AnnotationAssertion( "MBA:493") AnnotationAssertion( "NLX:57107") AnnotationAssertion( "PBA:10091") AnnotationAssertion(Annotation( "ABA:STRv") "striatum ventral region") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0004702") "striatum ventrale") AnnotationAssertion( "UBERON:0005403") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "ventral striatum") SubClassOf( ) SubClassOf(Annotation( "MA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (frontonasal suture) AnnotationAssertion(Annotation( ) Annotation( "GO:0097095") "A suture between frontal and nasal bones.") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:35359") AnnotationAssertion( "FMA:52948") AnnotationAssertion( "MA:0002973") AnnotationAssertion(Annotation( "FMA:52948") "frontonasal suture of skull") AnnotationAssertion( "uberon") AnnotationAssertion( "articulation of the nasal bone with frontal bone") AnnotationAssertion( "UBERON:0005404") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "frontonasal suture") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pararenal fat) AnnotationAssertion(Annotation( ) "The paranephric body (or paranephric fat or pararenal fat) is collection of adipose tissue located superficial to the renal fascia. The perirenal fat, or adipose capsule of kidney, is deep to the renal fascia but superficial to the renal capsule.") AnnotationAssertion( "TODO - split paranephric / pararenal") AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37713") AnnotationAssertion( "FMA:20503") AnnotationAssertion( "FMA:74280") AnnotationAssertion( "MA:0002974") AnnotationAssertion(Annotation( "FMA:20503") "pararenal fascia") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "corpus adiposum pararenale") AnnotationAssertion(Annotation( ) "paranephric body") AnnotationAssertion(Annotation( "MA:0002974") "paranephric fat") AnnotationAssertion(Annotation( "MA:0002974") "pararenal fascia") AnnotationAssertion(Annotation( "MA:0002974") "pararenal fat body") AnnotationAssertion( "UBERON:0005405") AnnotationAssertion(rdfs:label "pararenal fat") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/c/c1/Gray1125.png"^^xsd:anyURI) SubClassOf( ) # Class: (perirenal fat) AnnotationAssertion(Annotation( ) "The adipose capsule of kidney (or perinephric fat or perirenal fat) is a structure between the renal fascia and renal capsule, and may be regarded as a part of the latter. A different structure, the pararenal fat, is the adipose tissue superficial to the renal fascia.") AnnotationAssertion( "TODO - split perinephric / perirenal") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:36495") AnnotationAssertion( "FMA:15876") AnnotationAssertion( "FMA:20502") AnnotationAssertion( "MA:0002975") AnnotationAssertion(Annotation( "FMA:20502") "perirenal fascia") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "MA:0002975") "adipose capsule of kidney") AnnotationAssertion(Annotation( ) Annotation( ) "capsula adiposa renis") AnnotationAssertion(Annotation( "MA:0002975") "fatty capsule of kidney") AnnotationAssertion(Annotation( "MA:0002975") "perinephric fat") AnnotationAssertion(Annotation( "MA:0002975") "periphrenic fascia") AnnotationAssertion(Annotation( "MA:0002975") "perirenal fascia") AnnotationAssertion(Annotation( "MA:0002975") Annotation( ) "perirenal fat capsule") AnnotationAssertion(Annotation( ) "perirenal fat pad") AnnotationAssertion( "UBERON:0005406") AnnotationAssertion(rdfs:label "perirenal fat") AnnotationAssertion( "Illu:kidney.jpg"^^xsd:anyURI) SubClassOf( ) # Class: (sublingual ganglion) AnnotationAssertion(Annotation( "ISBN:0-683-40008-8"^^xsd:string) Annotation( "MP:0010105") "The small parasympathetic ganglion found anterior to the submandibular gland that provides postsynaptic fibers to the sublingual gland.") AnnotationAssertion( "EHDAA2:0001938") AnnotationAssertion( "EHDAA:10101") AnnotationAssertion( "FMA:77591") AnnotationAssertion( "MA:0002982") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005407") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "sublingual ganglion") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (circumventricular organ) AnnotationAssertion(Annotation( "MP:0013562") "Any of any of the secretory or sensory organs located in the brain region around or in relation to the ventricular system that are characterized by extensive vasculature and a lack of a normal blood brain barrier (BBB) and allow for the linkage between the central nervous system and peripheral blood flow.") AnnotationAssertion( "All vertebrates possess at least 4 circumventricular organs (including the hypothalamus) which can monitor the contents of the cerebrospinal fluid and secrete additional substances into it. (Butler, 1996, p. 330)") AnnotationAssertion( "CVOs contain neural tissue and are an integral part of neuroendocrine function; all of the CVOs, besides the subcommissural organ, contain extensive vasculature and fenestrated capillaries which leads to a leaky BBB at the site of the organs; the lack of a BBB allows CVOs to act as an alternative route for peptides and hormones in the neural tissue to the peripheral blood stream, while still protecting it from toxic substances") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:35243") AnnotationAssertion( "FMA:84081") AnnotationAssertion( "MA:0002942") AnnotationAssertion( "NLXANAT:20090312") AnnotationAssertion(Annotation( "NLXANAT:20090312") Annotation( ) "CVO") AnnotationAssertion(Annotation( "NLXANAT:20090312") "circumventricular organ") AnnotationAssertion(Annotation( "FMA:84081") "circumventricular organ of neuraxis") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005408") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "circumventricular organ") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/7/7d/Gray734.png"^^xsd:anyURI) SubClassOf( ) # Class: (alimentary part of gastrointestinal system) AnnotationAssertion(Annotation( ) "The part of the digestive system that excludes the hepatobiliary system.") AnnotationAssertion( "the decision to split digestive and gastrointestinal in this way may be revisited. As it currently stands, this class more closely aligns what MA calls the alimentary system") AnnotationAssertion(Annotation( "ncithesaurus:Gastrointestinal_System") "The system that includes the esophagus, stomach, small and large intestine, anus, liver, biliary tract, and pancreas[ncithesaurus:Gastrointestinal_System].") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000412") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0721676685 Sherwood Romer A and Parsons T, Vertebrate body (1977) p.3") "All metazoans (with degenerate exceptions) have some sort of digestive cavity with a means of entrance to and exit from it.[well established][VHOG]") AnnotationAssertion(Annotation( "MA"^^xsd:string) "that many anatomy ontologies consider this synonymous with digestive system. here we follow MA in dividing digestive system into gastrointestinal and hepatobiliary. hepatobiliary includes the liver and biliary tract. species-specific AO classes are categorized according to whether liver is included. For example, XAO includes liver as part of XAO:0000125 alimentary system, so we assume this class is the more generic class. We have one entity that is part of both gastrointestinal and hepatobiliary systems: hepatopancreatic ampulla.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0000058") AnnotationAssertion( "CALOHA:TS-0407") AnnotationAssertion( "EHDAA2:0000110") AnnotationAssertion( "EHDAA:514") AnnotationAssertion( "EMAPA:16246") AnnotationAssertion( "EV:0100056") AnnotationAssertion( "FMA:71132") AnnotationAssertion( "GAID:294") AnnotationAssertion( "MA:0000323") AnnotationAssertion( "MESH:A03.492") AnnotationAssertion( "NCIT:C12378") AnnotationAssertion(Annotation( "ncithesaurus:Gastrointestinal_System") "UMLS:C0012240") AnnotationAssertion( "VHOG:0000412") AnnotationAssertion( "galen:GastrointestinalTract") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "GAID:294") "GI tract") AnnotationAssertion(Annotation( "MA:0000323") "alimentary system") AnnotationAssertion(Annotation( "MA:0000323") "alimentary tract") AnnotationAssertion(Annotation( "FMA:71132") "gastro-intestinal system") AnnotationAssertion(Annotation( "UBERON:cjm"^^xsd:string) "gastroenterological system") AnnotationAssertion(Annotation( "GAID:294") "gastrointestinal (GI) tract") AnnotationAssertion(Annotation( "FMA:71132") "gastrointestinal system") AnnotationAssertion(Annotation( "FMA:71132") Annotation( ) "gastrointestinal tract") AnnotationAssertion( "UBERON:0005409") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "alimentary part of gastrointestinal system") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (cartilaginous otic capsule) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An otic capsule endochondral element that is composed primarily of cartilage tissue.") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0001500") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "Bilaterally paired cartilage encasing the semicircular canals of the inner ear.[TAO]") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0001500") Annotation( "TAO"^^xsd:string) "relationship type change: overlaps neurocranium (TAO:0001580) CHANGED TO: develops_from neurocranium (UBERON:0001703)[TAO]") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0001500") Annotation( "TAO"^^xsd:string) "relationship type change: overlaps neurocranium (TAO:0001580) CHANGED TO: part_of neurocranium (UBERON:0001703)[TAO]") AnnotationAssertion( "In elasmobranchs, the otic capsule remains cartilaginous in the adult; in the embryos of higher vertebrates, it is cartilaginous at first but later becomes bony (at approximately 23 weeks in humans). todo - check EMAPA") AnnotationAssertion( "UBERON:0010351") AnnotationAssertion( "EHDAA2:0001333") AnnotationAssertion( "EHDAA:4704") AnnotationAssertion( "EMAPA:17596") AnnotationAssertion( "EMAPA:18803") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37467") AnnotationAssertion( "TAO:0001500") AnnotationAssertion( "ZFA:0001500") AnnotationAssertion(Annotation( "ZFA:0001500") "auditory capsule") AnnotationAssertion( "otic capsule cartilage element") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005410") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "cartilaginous otic capsule") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (bony otic capsule) AnnotationAssertion(Annotation( "ISBN:0-683-40008-8"^^xsd:string) Annotation( "MP:0000039") "The cartilage or bony capsule surrounding the inner ear mechanism.") AnnotationAssertion( "In elasmobranchs, the otic capsule remains cartilaginous in the adult; in the embryos of higher vertebrates, it is cartilaginous at first but later becomes bony (at approximately 23 weeks in humans)") AnnotationAssertion( "EMAPA:17596") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37466") AnnotationAssertion( "MA:0000252") AnnotationAssertion( "otic capsule bone") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005411") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "bony otic capsule") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (optic fissure) AnnotationAssertion(Annotation( ) Annotation( ) Annotation( ) Annotation( "ZFA:0001284") "Groove that is in the developing ventral optic cup and through which blood vessels pass to the enclosed mesenchyme[ZFA]. a ventral fissure in the developing optic cup through which blood vessels pass to the enclosed mesenchyme[Free online medical dictionary].") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0011026") Annotation( "AAO"^^xsd:string) Annotation( "ISBN:0815318960") "A break in the continuity of the optic cup where the two sides of the cup meet.[AAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000655") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "DOI:10.1038/nrn2283 Lamb TD, Collin SP and Pugh EN, Evolution of the vertebrate eye: opsins, photoreceptors, retina and eye cup. Nature Reviews Neuroscience (2007)") "The folded arrangement of the vertebrate retina and RPE [retinal pigment epithelial] provides an evolutionary explanation for the occurrence of the choroid fissure, as proposed more than a century ago. Early in evolution, before the optic cup invaginated, the axons from retinal ganglion cells would simply have run over the surface of the structure. Hence, one can view the optic nerve as having acted rather like a rope in linking the retina to higher centres: the developing eye cup has simply wrapped around this 'rope', and the developing axons have thereby not needed to penetrate the retina.[well established][VHOG]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0011026") AnnotationAssertion( "EHDAA2:0001319") AnnotationAssertion( "EHDAA:4759") AnnotationAssertion( "EMAPA:17166") AnnotationAssertion( "MA:0001305") AnnotationAssertion( "RETIRED_EHDAA2:0000249") AnnotationAssertion( "TAO:0001284") AnnotationAssertion( "VHOG:0000655") AnnotationAssertion( "XAO:0000474") AnnotationAssertion( "ZFA:0001284") AnnotationAssertion(Annotation( "VHOG:0000655") "choroid fissure - optic fissure") AnnotationAssertion(Annotation( "ZFA:0001284") Annotation( ) "optic fissures") AnnotationAssertion(Annotation( "EHDAA2:0001319") "optic stalk fissure") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "MA:0001305") Annotation( "XAO:0000474") Annotation( "ZFA:0001284") "choroid fissure") AnnotationAssertion(Annotation( "XAO:0000474") "ventral choroidal fissure") AnnotationAssertion( "UBERON:0005412") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "Develeopment notes: As the eye starts to develop, a gap opens on the underside of each eye bud. This gap provides a way for the developing eye to be nourished. This gap, called the optic fissure, has to close before the eye is fully developed. Coloboma is the incomplete closer of the optic fissure") AnnotationAssertion(rdfs:label "optic fissure") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/9/98/Gray865.png"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "ZFA"^^xsd:string) ) SubClassOf(Annotation( "cjm"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) DisjointClasses( ) # Class: (spinocerebellar tract) AnnotationAssertion(Annotation( "NLXANAT:1005036") "This tract conveys interoceptive, proprioceptive, and exteroceptive information from the body's internal organs, and from the trunk, extremities, and neck region to the Cerebellum.") AnnotationAssertion(Annotation( ) "The spinocerebellar tract is a set of axonal fibers originating in the spinal cord and terminating in the ipsilateral cerebellum. This tract conveys information to the cerebellum about limb and joint position[Wikipedia:Spinocerebellar_tract].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:sc") AnnotationAssertion( "DHBA:12749") AnnotationAssertion( "GAID:733") AnnotationAssertion( "MBA:85") AnnotationAssertion( "MESH:D020824") AnnotationAssertion( "NLX:60355") AnnotationAssertion( "NLXANAT:1005036") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005413") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "spinocerebellar tract") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/b/b2/Spinal_cord_tracts_-_English.svg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (zone of polarizing activity) AnnotationAssertion(Annotation( ) Annotation( ) "An area of mesenchymal cells that contains signals which instruct the developing limb or fin bud to form along the anterior/posterior axis.") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0010763") Annotation( "AAO"^^xsd:string) Annotation( "AAO:EJS"^^xsd:string) "Morphologically indistinct signaling region found in the posterior portion of the limb bud. Associated with anterior-posterior patterning of the digits.[AAO]") AnnotationAssertion( "Sonic hedgehog (Shh) produced by ZPA represents the key mediator of the polarizing activity that regulates patterning of the limb/fin along the anterio-posterior (A-P) axis[MP:0012528]") AnnotationAssertion( ) AnnotationAssertion( "AAO:0010763") AnnotationAssertion(Annotation( "ZFA:0001451") "ZPA") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "zona activitatis polarisantis") AnnotationAssertion( "UBERON:0005414") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "zone of polarizing activity") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/5/56/Limbbuddiagram.jpg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (zone of polarizing activity of pectoral appendage) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A zone of polarizing activity that is part of a pectoral appendage bud mesenchyme.") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0001451") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "A small group of mesodermal cells located at the posterior margin of the developing fin bud. the ZPA is thought to produce retinoic acid and thereby provides positional information to the developing bud. Gibert et al., 2006.[TAO]") AnnotationAssertion( "TAO:0001451") AnnotationAssertion( "ZFA:0001451") AnnotationAssertion( "anterior ZPA") AnnotationAssertion( "fore ZPA") AnnotationAssertion( "pectoral ZPA") AnnotationAssertion(Annotation( "ZFA:0001451") "zone of polarizing activity pectoral fin bud") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005415") AnnotationAssertion(rdfs:label "zone of polarizing activity of pectoral appendage") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses(Annotation( "lexical"^^xsd:string) ) # Class: (zone of polarizing activity of pelvic appendage) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A zone of polarizing activity that is part of a pelvic appendage bud mesenchyme.") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0001452") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "A small group of mesodermal cells located at the posterior margin of the developing fin bud. The ZPA is thought to produce retinoic acid and thereby provides positional information to the developing bud. Gibert et al., 2006.[TAO]") AnnotationAssertion( "TAO:0001452") AnnotationAssertion( "ZFA:0001452") AnnotationAssertion( "hind ZPA") AnnotationAssertion( "pelvic ZPA") AnnotationAssertion( "posterior ZPA") AnnotationAssertion(Annotation( "ZFA:0001452") "zone of polarizing activity pelvic fin bud") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005416") AnnotationAssertion(rdfs:label "zone of polarizing activity of pelvic appendage") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (forelimb bud) AnnotationAssertion(Annotation( ) "A limb bud that develops into a forelimb.") AnnotationAssertion( ) AnnotationAssertion( "AAO:0010381") AnnotationAssertion( "BTO:0001645") AnnotationAssertion( "EHDAA:1699") AnnotationAssertion( "EMAPA:16406") AnnotationAssertion( "FMA:296782") AnnotationAssertion( "MIAA:0000065") AnnotationAssertion( "RETIRED_EHDAA2:0003198") AnnotationAssertion( "XAO:0003065") AnnotationAssertion( "anterior limb bud") AnnotationAssertion(Annotation( "MIAA:0000065") "limb bud - forelimb") AnnotationAssertion(Annotation( "RETIRED_EHDAA2:0003198") "upper limb bud") AnnotationAssertion(Annotation( "NCBITaxon:8782"^^xsd:string) Annotation( "OBOL:automatic"^^xsd:string) Annotation( ) "wing bud") AnnotationAssertion( "uberon") AnnotationAssertion( "arm bud") AnnotationAssertion( "UBERON:0005417") AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "Genes: Tbx5 specifies forelimbs. Wnt2b restricts Fgf10 in chick // In tetrapods, the position of the forelimb is associated with the anterior expression border of Hoxc6 in the paraxial mesoderm (Burke et al., 1995)") AnnotationAssertion(rdfs:label "forelimb bud") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses(Annotation( "lexical"^^xsd:string) ) # Class: (hindlimb bud) AnnotationAssertion(Annotation( ) "A limb bud that develops into a hindlimb.") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0010382") Annotation( "AAO"^^xsd:string) Annotation( "XAO:curator") "The bilateral thickening of the ectoderm in the region of the first noticeable at NF stage 47, and innervated by NF stage 51. The hind limb buds develop before the forelimb buds.[AAO]") AnnotationAssertion( ) AnnotationAssertion( "AAO:0010382") AnnotationAssertion( "EHDAA:2358") AnnotationAssertion( "EMAPA:16779") AnnotationAssertion( "MIAA:0000256") AnnotationAssertion( "RETIRED_EHDAA2:0003197") AnnotationAssertion( "XAO:0003066") AnnotationAssertion(Annotation( "XAO:0003066") "hind limb bud") AnnotationAssertion( "posterior limb bud") AnnotationAssertion( "uberon") AnnotationAssertion( "leg bud") AnnotationAssertion( "limb bud - hindlimb") AnnotationAssertion( "UBERON:0005418") AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "Genes: Tbx4 specifies hindlimbs. Wnt8c restricts Fgf10 in chick.") AnnotationAssertion(rdfs:label "hindlimb bud") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pectoral appendage bud) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A limb bud that develops into a forelimb or pectoral fin.") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0000141") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "Fin bud that develops into the pectoral fin.[TAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001754") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "DOI:10.1002/jmor.10264 Davis MC, Shubin NH, Force A, Pectoral fin and girdle development in the basal actinopterygians Polyodon spathula and Acipenser transmontanus. Journal of Morphology (2004)") "While the skeletons of teleost pectoral fins and tetrapod forelimbs are homologous at the level of endoskeletal radials, teleosts and tetrapods do not share homologous skeletal elements at the level of 'individuated' pro-, meso-, and metapterygia. Among osteichthyans, only basal actinopterygians retain the full complement of elements present in non-osteichthyan gnathostomes.[uncertain][VHOG]") AnnotationAssertion( "EFO:0003430") AnnotationAssertion( "TAO:0000141") AnnotationAssertion( "VHOG:0001754") AnnotationAssertion( "VHOG_RETIRED:0001259") AnnotationAssertion( "ZFA:0000141") AnnotationAssertion(Annotation( "VHOG:0001754") "forelimb - pectoral fin bud") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "TAO:0000141") "pectoral fin bud") AnnotationAssertion(Annotation( "TAO:0000141") Annotation( ) "pectoral fin buds") AnnotationAssertion( "UBERON:0005419") AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "at this time we have no need to name a more specific 'pectoral fin bud' class, but we may in future") AnnotationAssertion(rdfs:label "pectoral appendage bud") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pelvic appendage bud) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A limb bud that develops into a hindlimb or pelvic fin.") AnnotationAssertion(Annotation( ) ) AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0001384") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "Fin bud that develops into the pelvic fin.[TAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001260") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0198540472 Janvier P, Early vertebrates (1996) p.268"^^xsd:string) "Most anatomists now agree that the three proximal bones of the tetrapod limbs are homologous to the two or three proximal elements of the paired fin skeleton of other sarcopterygians, that is the humerus-femur, radius-tibia, and ulna-fibula.[well established][VHOG]") AnnotationAssertion( "EFO:0003469") AnnotationAssertion( "TAO:0001384") AnnotationAssertion( "VHOG:0001260") AnnotationAssertion( "ZFA:0001384") AnnotationAssertion(Annotation( "VHOG:0001260") "hindlimb/pelvic fin bud") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "TAO:0001384") "pelvic fin bud") AnnotationAssertion(Annotation( "ZFA:0001384") Annotation( ) "pelvic fin buds") AnnotationAssertion( "UBERON:0005420") AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "at this time we have no need to name a more specific 'pelvic fin bud' class, but we may in future") AnnotationAssertion(rdfs:label "pelvic appendage bud") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pectoral appendage apical ectodermal ridge) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An apical ectodermal ridge that is part of a pectoral appendage bud.") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001064") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( ) "An ectodermal thickening at the end of the forelimb bud in the developing embryo. [TFD][VHOG]") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0000085") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "Apical ectodermal ridge that is part of the pectoral fin bud.[TAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001064") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( ) "Pectoral and pelvic fins are homologous to the tetrapod fore and hindlimb, respectively. (...) The zebrafish AER [apical ectodermal ridge] is an apical ectodermal thickening at the distal tip of the fin bud and consists of wedge-shaped cells of the basal stratum. The AER is observed only transiently, and from 36 hpf onwards the cells of this region form the apical fold (AF), which consists of a dorsal and a ventral layer of cylindrically-shaped ectodermal cells extending from the anterior to the posterior fin margin. Despite the change in shape, the AF still carries out the same functions as the AER. Indeed, although the AER receives its name from its characteristic shape, being composed of a pseudostratified ectoderm in the chicken and a polystratified ectoderm in the mouse, this independence of AER morphology from its function is also observed in tetrapods. The AF also expresses similar molecular markers to the tetrapod AER, suggesting that it fulfills similar functions in the fin as the AER does in tetrapod limbs.[well established][VHOG]") AnnotationAssertion( "EFO:0003487") AnnotationAssertion( "EHDAA2:0000138") AnnotationAssertion( "EMAPA:16778") AnnotationAssertion( "TAO:0000085") AnnotationAssertion( "TAO:0000736") AnnotationAssertion( "VHOG:0001064") AnnotationAssertion( "ZFA:0000085") AnnotationAssertion(Annotation( "VHOG:0001064") "AER forelimb") AnnotationAssertion(Annotation( "VHOG:0001064") "apical ectodermal ridge forelimb") AnnotationAssertion(Annotation( "ZFA:0000085") "apical ectodermal ridge pectoral fin bud") AnnotationAssertion(Annotation( "EHDAA2:0000138") "upper limb bud apical ectodermal ridge") AnnotationAssertion(Annotation( "Giesha:syn") Annotation( ) "wing AER") AnnotationAssertion(Annotation( ) "wing apical ectodermal ridge") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "TAO:0000085") "aer pectoral fin") AnnotationAssertion(Annotation( "TAO:0000085") "apical ectodermal ridge pectoral fin") AnnotationAssertion(Annotation( "TAO:0000085") "apical fold pectoral fin") AnnotationAssertion( "UBERON:0005421") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "pectoral appendage apical ectodermal ridge") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (pelvic appendage apical ectodermal ridge) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An apical ectodermal ridge that is part of a pelvic appendage bud.") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001066") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( ) "An ectodermal thickening at the end of the hindlimb bud in the developing embryo. [TFD][VHOG]") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0001385") Annotation( "TAO"^^xsd:string) Annotation( "ZIFIN:curator") "Apical ectodermal ridge that is part of the pelvic fin bud.[TAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001066") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( ) "Pectoral and pelvic fins are homologous to the tetrapod fore and hindlimb, respectively. (...) The zebrafish AER [apical ectodermal ridge] is an apical ectodermal thickening at the distal tip of the fin bud and consists of wedge-shaped cells of the basal stratum. The AER is observed only transiently, and from 36 hpf onwards the cells of this region form the apical fold (AF), which consists of a dorsal and a ventral layer of cylindrically-shaped ectodermal cells extending from the anterior to the posterior fin margin. Despite the change in shape, the AF still carries out the same functions as the AER. Indeed, although the AER receives its name from its characteristic shape, being composed of a pseudostratified ectoderm in the chicken and a polystratified ectoderm in the mouse, this independence of AER morphology from its function is also observed in tetrapods. The AF also expresses similar molecular markers to the tetrapod AER, suggesting that it fulfills similar functions in the fin as the AER does in tetrapod limbs.[well established][VHOG]") AnnotationAssertion( "EFO:0003681") AnnotationAssertion( "EHDAA2:0003194") AnnotationAssertion( "EMAPA:16892") AnnotationAssertion( "TAO:0001385") AnnotationAssertion( "VHOG:0001066") AnnotationAssertion( "ZFA:0001385") AnnotationAssertion(Annotation( "VHOG:0001066") "apical ectodermal ridge hind limb") AnnotationAssertion(Annotation( "VHOG:0001066") "apical ectodermal ridge hindlimb") AnnotationAssertion(Annotation( "EHDAA2:0003194") "lower lmb bud apical ectodermal ridge") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "VHOG:0001066") "AER hindlimb") AnnotationAssertion(Annotation( "TAO:0001385") "apical ectodermal ridge pelvic fin bud") AnnotationAssertion( "leg AER") AnnotationAssertion( "UBERON:0005422") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "pelvic appendage apical ectodermal ridge") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (developing anatomical structure) AnnotationAssertion( "AEO:0000125") AnnotationAssertion( "CALOHA:TS-2122") AnnotationAssertion( "EHDAA2:0003125") AnnotationAssertion( "FBbt:00007006") AnnotationAssertion( "FMA:292313") AnnotationAssertion( "MIAA:0000019") AnnotationAssertion( "uberon") AnnotationAssertion( "developing structure") AnnotationAssertion( "developmental structure") AnnotationAssertion(Annotation( "MIAA:0000019") "developmental tissue") AnnotationAssertion( "UBERON:0005423") AnnotationAssertion(rdfs:label "developing anatomical structure") SubClassOf( ) # Class: (presumptive retinal pigmented epithelium) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Portion of tissue that is the outer layer of the optic cup and will become the retinal pigmented epithelium.") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000492") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0030223693 Liem KF, Bemis WE, Walker WF, Grande L, Functional Anatomy of the Vertebrates: An Evolutionary Perspective (2001) p.429"^^xsd:string) "(...) an essentially similar sequence of events occurs during the embryonic development of the vertebrate eye. The eye initially develops as a single median evagination of the diencephalon that soon bifurcates to form the paired optic vesicles. As each optic vesicle grows towards the body surface, its proximal part narrows as the optic stalk, and its distal part invaginates to form a two-layered optic cup. (...) The outer layer of the optic cup becomes the pigment layer of the retina, whereas the inner layer differentiates into the photoreceptive cells and neuronal layers of the retina.[well established][VHOG]") AnnotationAssertion( "EHDAA2:0001306") AnnotationAssertion( "EMAPA:16677") AnnotationAssertion( "TAO:0000064") AnnotationAssertion( "VHOG:0000492") AnnotationAssertion( "ZFA:0000064") AnnotationAssertion( "future RPE") AnnotationAssertion( "future retinal pigmented epithelium") AnnotationAssertion(Annotation( "EHDAA2:0001306") "optic cup outer layer") AnnotationAssertion(Annotation( "ZFA:0000064") "outer layer optic cup") AnnotationAssertion(Annotation( "ZFA:0000064") Annotation( ) "presumptive pigmented epithelia") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "EMAPA:16677") "future PRE") AnnotationAssertion(Annotation( "EMAPA:16677") "future pigmented layer") AnnotationAssertion(Annotation( "EMAPA:16677") "future pigmented retinal epithelium") AnnotationAssertion(Annotation( "TAO:0000064") "presumptive pigmented epithelium") AnnotationAssertion( "UBERON:0005424") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "presumptive retinal pigmented epithelium") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (presumptive neural retina) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Portion of tissue that is the inner layer of the optic cup and will become the neural retina.") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000490") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0030223693 Liem KF, Bemis WE, Walker WF, Grande L, Functional Anatomy of the Vertebrates: An Evolutionary Perspective (2001) p.429"^^xsd:string) "(...) an essentially similar sequence of events occurs during the embryonic development of the vertebrate eye. The eye initially develops as a single median evagination of the diencephalon that soon bifurcates to form the paired optic vesicles. As each optic vesicle grows towards the body surface, its proximal part narrows as the optic stalk, and its distal part invaginates to form a two-layered optic cup. (...) The outer layer of the optic cup becomes the pigment layer of the retina, whereas the inner layer differentiates into the photoreceptive cells and neuronal layers of the retina.[well established][VHOG]") AnnotationAssertion( "EHDAA2:0001304") AnnotationAssertion( "EMAPA:16675") AnnotationAssertion( "TAO:0001071") AnnotationAssertion( "VHOG:0000490") AnnotationAssertion( "ZFA:0001071") AnnotationAssertion( "future neural retina") AnnotationAssertion( "future retinal neural layer") AnnotationAssertion(Annotation( "ZFA:0001071") "inner layer optic cup") AnnotationAssertion(Annotation( "EHDAA2:0001304") "optic cup inner layer") AnnotationAssertion(Annotation( "ZFA:0001071") Annotation( ) "presumptive retinas") AnnotationAssertion( "uberon") AnnotationAssertion( "future NR") AnnotationAssertion(Annotation( "EMAPA:16675") "future neural epithelium") AnnotationAssertion(Annotation( "EMAPA:16675") "future neural layer") AnnotationAssertion(Annotation( "TAO:0001071") "presumptive retina") AnnotationAssertion( "UBERON:0005425") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "presumptive neural retina") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lens vesicle) AnnotationAssertion(Annotation( ) Annotation( "ZFIN:curator"^^xsd:string) "Portion of tissue that gives rise to the lens.") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001163") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( ) "A vesicle formed from the lens pit of the embryo, developing into the crystalline lens. [TFD][VHOG]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001163") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0030223693 Liem KF, Bemis WE, Walker WF, Grande L, Functional Anatomy of the Vertebrates: An Evolutionary Perspective (2001) p.429"^^xsd:string) "(...) an essentially similar sequence of events occurs during the embryonic development of the vertebrate eye. The eye initially develops as a single median evagination of the diencephalon that soon bifurcates to form the paired optic vesicles. As each optic vesicle grows towards the body surface, its proximal part narrows as the optic stalk, and its distal part invaginates to form a two-layered optic cup. (...) The optic cup induces the overlying surface ectoderm first to thicken as a lens placode and then to invaginate and form a lens vesicle that differentiates into the lens.[well established][VHOG]") AnnotationAssertion(Annotation( "ZFA"^^xsd:string) "the lens of zebrafish (and other teleosts) forms from delamination of cells from the lens placode; thus, there is no formation of a hollow lens vesicle, in contrast to the situation in mammals and birds (Glass and Dahm, 2004) [PMID:16496288] The lens of the zebrafish forms by delamination of lens placodal cells and not through invagination. This results in a solid spherical mass as opposed to a hollow lens vesicle. Detachment of the solid lens vesicle of zebrafish at 24b26 hpf is accomplished in part by apoptosis, similar to mammals") AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0000983") AnnotationAssertion( "EHDAA:4737") AnnotationAssertion( "EMAPA:17163") AnnotationAssertion( "TAO:0002205") AnnotationAssertion( "VHOG:0001163") AnnotationAssertion( "ZFA:0001679") AnnotationAssertion(Annotation( ) "hollow lens vesicle") AnnotationAssertion(Annotation( "ZFA:0001679") Annotation( ) "solid lens vesicle") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "ZFA:0001679") "immature lens") AnnotationAssertion(Annotation( "ZFA:0001679") Annotation( "ZFIN:ZDB-PUB-091023-49") "lens mass") AnnotationAssertion(Annotation( "ZFA:0001679") "presumptive lens") AnnotationAssertion( "UBERON:0005426") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "lens vesicle") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (corneal primordium) AnnotationAssertion(Annotation( "ZFIN:ZDB-PUB-061010-3") "Portion of tissue that is part of the eye and gives rise to the mature, fully layered cornea.") AnnotationAssertion( "TAO:0002188") AnnotationAssertion( "ZFA:0001688") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005427") AnnotationAssertion(rdfs:label "corneal primordium") SubClassOf(Annotation( "ZFA"^^xsd:string) ) SubClassOf(Annotation( "Obol") ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "ZFA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (vagal neural crest) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Vagal neural crest is adjacent to the first seven somites gives rise to both ganglionic and ectomesenchymal derivatives[ZFA].") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0000818") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "Vagal neural crest is adjacent to the first seven somites gives rise to both ganglionic and ectomesenchymal derivatives.[TAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001208") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0030223693 Liem KF, Bemis WE, Walker WF, Grande L, Functional Anatomy of the Vertebrates: An Evolutionary Perspective (2001) p.43") "We conclude this section by listing some of the many synapomorphies of craniates, including (1) the neural crest (...).[well established][VHOG]") AnnotationAssertion(Annotation( "filemaps.com") "In chicken fate mapping studies it was found to originate from neural crest residing between Somite 1-7 (S1-7); In mouse it is considered to be derived from rhombencephalic (post otic) neural crest cells and trunk neural crest cells (anterior to S5)") AnnotationAssertion( "EHDAA2:0002156") AnnotationAssertion( "EHDAA:669") AnnotationAssertion( "TAO:0000818") AnnotationAssertion( "VHOG:0001208") AnnotationAssertion( "XAO:0004191") AnnotationAssertion( "ZFA:0000818") AnnotationAssertion(Annotation( "XAO:0004191") Annotation( ) "VNC") AnnotationAssertion( "uberon") AnnotationAssertion( "enteric neural crest") AnnotationAssertion(Annotation( "ZFA:0000818") "post-otic neural crest") AnnotationAssertion( "UBERON:0005428") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "vagal neural crest") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (dorsal pancreatic duct) AnnotationAssertion(Annotation( ) "A pancreatic duct that develops from the dorsal pancreatic bud.") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000255") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "DOI:10.1016/j.ydbio.2005.04.035 Yee NS, Lorent K, Pack M, Exocrine pancreas development in zebrafish. Developmental Biology (2005)") "These data show that ducts within the zebrafish pancreas originally arise in situ from isolated progenitor cells rather than arising from reiterative branching of the pancreatic epithelium. This process of pancreatic duct formation in zebrafish may be analogous to the mechanism of duct formation in the mammalian mammary and salivary glands. (...) A related mechanism of duct formation has also been proposed to occur within the mammalian pancreatic epithelium.[uncertain][VHOG]") AnnotationAssertion(Annotation( "WP"^^xsd:string) "Most humans have just one pancreatic duct. However, some have an additional accessory pancreatic duct also called the Duct of Santorini, which connects straight to the duodenum at the minor duodenal papilla. Both these ducts connect to the second part (the vertical one) of the duodenum. However, the Duct of Santorini, which bypasses the Ampulla of Vater, is non-functional whereas the Duct of Wirsung is functional and carries the digestive enzymes released by the pancreas. It is named for Giovanni Domenico Santorini") AnnotationAssertion( "UBERON:0005603") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0001372") AnnotationAssertion( "EHDAA:3013") AnnotationAssertion( "EHDAA:9188") AnnotationAssertion( "EMAPA:32953") AnnotationAssertion( "FMA:14534") AnnotationAssertion( "MA:0000125") AnnotationAssertion( "RETIRED_EHDAA2:0000417") AnnotationAssertion( "VHOG:0000255") AnnotationAssertion(Annotation( "FMA:14534") "Santorini's duct") AnnotationAssertion(Annotation( "MA:0000125") "accessory pancreatic duct") AnnotationAssertion(Annotation( ) Annotation( "FMA:14534") "duct of Santorini") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "accessory pancreatic duct of santorini") AnnotationAssertion(Annotation( ) Annotation( ) "ductus pancreaticus accessorius") AnnotationAssertion( "ductus pancreatis dorsalis") AnnotationAssertion(Annotation( ) "pancreatic duct of santorini") AnnotationAssertion( "UBERON:0005429") AnnotationAssertion(rdfs:label "dorsal pancreatic duct") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/1/15/Gray1100.png"^^xsd:anyURI) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (ansa cervicalis) AnnotationAssertion(Annotation( ) "A loop of nerves that are part of the cervical plexus that lies superficial to the internal jugular vein in the carotid sheath. Branches from the ansa cervicalis innervate three of the four infrahyoid muscles, including the sternohyoid muscle, the sternothyroid muscle, and the omohyoid muscle.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:ancer") AnnotationAssertion( "EHDAA2:0000124") AnnotationAssertion( "EHDAA:6669") AnnotationAssertion( "FMA:55142") AnnotationAssertion(Annotation( ) Annotation( ) "ansa cervicalis") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "ansa hypoglossi") AnnotationAssertion( "UBERON:0005430") AnnotationAssertion(rdfs:label "ansa cervicalis") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/e/e6/Gray795.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (anterior spinal artery) AnnotationAssertion(Annotation( ) "A blood vessel that supplies the anterior portion of the spinal cord. It arises from branches of the vertebral arteries and is supplied by the anterior segmental medullary arteries, including the artery of Adamkiewicz, and courses along the anterior aspect of the spinal cord.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0000131") AnnotationAssertion( "EHDAA:6382") AnnotationAssertion( "EMAPA:18242") AnnotationAssertion( "FMA:50531") AnnotationAssertion( "NCIT:C12833") AnnotationAssertion(Annotation( "ncithesaurus:Anterior_Spinal_Artery") "UMLS:C0149603") AnnotationAssertion(Annotation( "FMA:50531") "anterior medial spinal artery") AnnotationAssertion(Annotation( "FMA:50531") "ventral spinal artery") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "anterior spinal arteries") AnnotationAssertion(Annotation( ) "arteria spinalis anterior") AnnotationAssertion(Annotation( ) Annotation( ) "arteria spinalis anterior") AnnotationAssertion(Annotation( ) "ventral artery of the spinal cord") AnnotationAssertion( "UBERON:0005431") AnnotationAssertion(rdfs:label "anterior spinal artery") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/7/73/Anterior_spinal_cord_-_very_low_mag.jpg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) DisjointClasses(Annotation( "lexical"^^xsd:string) ) # Class: (aortic sac) AnnotationAssertion(Annotation( "MP:0012510") "The dilated structure that is lined by endothelial cells and located at the arterial pole of the heart just above (distal to) the truncus arteriosus in mammalian embryos; it is the primordial vascular channel from which the aortic arches (and eventually the dorsal aortae) arise; the aortic sac is homologous to the ventral aorta of gill-bearing vertebrates.") AnnotationAssertion(Annotation( ) "the merged ventral aortae of the embryo which supplies blood to the aortic arches[TMD][http://medical-dictionary.thefreedictionary.com/aortic+sac].") AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0004145") AnnotationAssertion( "EHDAA:9826") AnnotationAssertion( "EMAPA:36461") AnnotationAssertion( "FMA:71008") AnnotationAssertion( "RETIRED_EHDAA2:0000133") AnnotationAssertion(Annotation( ) "saccus aorticus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005432") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "aortic sac") SubClassOf(Annotation( "EHDAA2"^^xsd:string) ) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (obsolete peripheral part of autonomous nervous system) AnnotationAssertion( "FMA:65553") AnnotationAssertion( "SCTID:429921001") AnnotationAssertion(Annotation( "FMA:65553") "autonomic division of peripheral nervous system") AnnotationAssertion(Annotation( "FMA:65553") "autonomic part of peripheral nervous system") AnnotationAssertion(Annotation( "FMA:65553") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "divisio autonomica systematis nervosi peripherici") AnnotationAssertion(Annotation( "FMA:65553") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "pars autonomica systematis nervosi peripherici") AnnotationAssertion(Annotation( "FMA:65553") "peripheral autonomic nervous system") AnnotationAssertion(Annotation( "FMA:65553") "peripheral part of autonomic nervous system") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005433") AnnotationAssertion(rdfs:comment "Obsoleted as our current model is to treat the entire ANS as being part of the PNS") AnnotationAssertion(rdfs:label "obsolete peripheral part of autonomous nervous system") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (cervical region) AnnotationAssertion( ) AnnotationAssertion( "FMA:24219") AnnotationAssertion(Annotation( "FMA:24219") "cervical region") AnnotationAssertion(Annotation( "FMA:24219") "neck subdivision") AnnotationAssertion(Annotation( "FMA:24219") "region of neck") AnnotationAssertion(Annotation( "FMA:24219") "subdivision of neck") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005434") AnnotationAssertion(rdfs:label "cervical region") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (upper part of cisterna chyli) AnnotationAssertion(Annotation( ) "A dilated sac at the lower end of the thoracic duct into which lymph from the intestinal trunk and two lumbar lymphatic trunks flow.") AnnotationAssertion( "In dogs, it is located to the left and often ventral to the aorta; in cats it is left and dorsal; in guinea pigs it runs to the left and drains into the left innominate vein") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0000253") AnnotationAssertion( "EHDAA:8679") AnnotationAssertion( "FMA:5835") AnnotationAssertion( "NCIT:C34126") AnnotationAssertion(Annotation( "ncithesaurus:Chyle_Cistern") "UMLS:C0008840") AnnotationAssertion(Annotation( "FMA:5835") "atypical confluence of lymph trunks") AnnotationAssertion(Annotation( "FMA:5835") "chyle cistern") AnnotationAssertion(Annotation( "FMA:5835") "cistern of Pecquet") AnnotationAssertion(Annotation( "FMA:5835") "cisterna chyli") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "chyle cistern") AnnotationAssertion(Annotation( ) Annotation( ) "cysterna chyli") AnnotationAssertion(Annotation( ) Annotation( ) "receptaculum chyli") AnnotationAssertion( "UBERON:0005435") AnnotationAssertion(rdfs:label "upper part of cisterna chyli") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/7/75/Gray599.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (common hepatic artery) AnnotationAssertion(Annotation( ) "In anatomy, the common hepatic artery is a short blood vessel that supplies oxygenated blood to the liver, pylorus (a part of the stomach), duodenum (a part of the small intestine) and pancreas. It arises from the celiac artery and has the following branches:.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0000308") AnnotationAssertion( "EHDAA:8570") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37206") AnnotationAssertion( "FMA:14771") AnnotationAssertion( "MA:0003094") AnnotationAssertion( "galen:CommonHepaticArtery") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "arteria hepatica communis") AnnotationAssertion(Annotation( ) "common hepatic") AnnotationAssertion( "UBERON:0005436") AnnotationAssertion(rdfs:label "common hepatic artery") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/6/65/Gray532.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (conus medullaris) AnnotationAssertion(Annotation( ) "The conus medullaris is the terminal end of the spinal cord. It occurs near lumbar vertebral levels 1 (L1) and 2 (L2). After the spinal cord tapers out, the spinal nerves continue as dangling nerve roots called cauda equina. This terminal nerve root tail is referred to as the filum terminale. The upper end of the conus medullaris is usually not well defined.") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000546") Annotation( "VHOG"^^xsd:string) Annotation( ) "The conical end of the spinal cord, which continues with the filum terminale. [Dorian_AF, Elsevier's_encyclopaedic_dictionary_of_medicine, Part_B:_Anatomy_(1988)_Amsterdam_etc.:_Elsevier][VHOG]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0000315") AnnotationAssertion( "EHDAA:6684") AnnotationAssertion( "EMAPA:18219") AnnotationAssertion( "FMA:74897") AnnotationAssertion( "NCIT:C12832") AnnotationAssertion(Annotation( "ncithesaurus:Conus_Medullaris") "UMLS:C0149601") AnnotationAssertion( "VHOG:0000546") AnnotationAssertion( "medullary cone") AnnotationAssertion( "uberon") AnnotationAssertion( "termination of the spinal cord") AnnotationAssertion( "UBERON:0005437") AnnotationAssertion(rdfs:label "conus medullaris") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/f/f4/Gray662.png"^^xsd:anyURI) SubClassOf( ) # Class: (coronary sinus) AnnotationAssertion(Annotation( "ISBN:0-683-40008-8"^^xsd:string) Annotation( "MP:0010436") "The short trunk that recieves most of the cardiac veins carrying the blood from the myocardium and delivers it to the right atrium, with the sinoatrial connection occurring between the inferior vena cava and the atrioventricular orifice.") AnnotationAssertion(Annotation( "WP"^^xsd:string) "The sinus, before entering the auricle, is considerably dilated - nearly to the size of the end of the little finger. Its wall is partly muscular, and at its junction with the great coronary vein is somewhat constricted and furnished with a valve consisting of two unequal segments") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0000320") AnnotationAssertion( "EHDAA:9884") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37836") AnnotationAssertion( "FMA:4706") AnnotationAssertion( "NCIT:C32378") AnnotationAssertion(Annotation( "ncithesaurus:Coronary_Sinus") "UMLS:C0456944") AnnotationAssertion( "sinus coronarius") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "sinus coronarius") AnnotationAssertion( "UBERON:0005438") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "coronary sinus") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/5/5f/Gray491.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (definitive endoderm) AnnotationAssertion( "EFO:0002574") AnnotationAssertion( "EHDAA2:0000337") AnnotationAssertion( "EHDAA:218") AnnotationAssertion( "EMAPA:16070") AnnotationAssertion( "FMA:85519") AnnotationAssertion( "VHOG:0000751") AnnotationAssertion(Annotation( "FMA:85519") "embryonic endoderm") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005439") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "definitive endoderm") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (ductus arteriosus) AnnotationAssertion(Annotation( ) Annotation( "MESH:A07.541.278.395") Annotation( "MP:0010564") "A fetal blood vessel connecting the pulmonary artery with the descending aorta[MESH]. In the developing fetus, the ductus arteriosus is a shunt connecting the pulmonary artery to the aortic arch. It allows most of the blood from the right ventricle to bypass the fetus' fluid-filled lungs, protecting the lungs from being overworked and allowing the left ventricle to strengthen. There are two other fetal shunts, the ductus venosus and the foramen ovale[MP]. the fetal vessel that connects the left pulmonary artery with the descending aorta; the ductus arteriosus normally regresses into a fibrous cord, the ligamentum arteriousum after birth[MP].") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000923") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( ) "The temporary channel or blood vessel between the aorta and pulmonary artery in the fetus. [TFD][VHOG]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000923") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0030223693 Liem KF, Bemis WE, Walker WF, Grande L, Functional Anatomy of the Vertebrates: An Evolutionary Perspective (2001) p.620") "On the other hand, in the sister clade of the actinopterygians, the sarcopterygians, the gill circulation is supplemented with lung ventilation. As a result, the pulmonary artery and vein and a functional ductus arteriosus arose as a major evolutionary innovation from the sixth arch, giving the organism a flexible shunt to balance blood supply to and from gills and lungs according to environmental conditions.[well established][VHOG]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EFO:0002515") AnnotationAssertion( "EHDAA2:0000420") AnnotationAssertion( "EHDAA:6462") AnnotationAssertion( "EMAPA:17858") AnnotationAssertion( "FMA:79871") AnnotationAssertion( "MA:0001947") AnnotationAssertion( "MESH:D004373") AnnotationAssertion( "NCIT:C52854") AnnotationAssertion(Annotation( "ncithesaurus:Ductus_Arteriosus") "UMLS:C0013273") AnnotationAssertion( "VHOG:0000923") AnnotationAssertion( "galen:DuctusArteriosus") AnnotationAssertion(Annotation( "MP:0010564") "ductus Botallo") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "Botallo's duct") AnnotationAssertion(Annotation( "MP:0010564") "arterial canal") AnnotationAssertion(Annotation( "MP:0010564") "arterial duct") AnnotationAssertion(Annotation( ) "ductus arteriosis") AnnotationAssertion(Annotation( ) "ductus arteriosum") AnnotationAssertion(Annotation( ) "ductus botalli") AnnotationAssertion(Annotation( ) "ductus layton") AnnotationAssertion(Annotation( "MP:0010564") "fetal ductus arteriosus") AnnotationAssertion( "UBERON:0005440") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "ductus arteriosus") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/e/ee/Gray502.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "left branch") Annotation( "embryology.ch") ObjectSomeValuesFrom( )) # Class: (external intercostal muscle) AnnotationAssertion(Annotation( ) Annotation( ) "An intercostal muscle that aids in quiet and forced inhalation via elevation of the ribs, and expanding the transverse dimensions of the thoracic cavity.") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000904") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0471090588 Hildebrand M, Analysis of vertebrate structure (1983) p.193") "Behind the thorax, the lateral group (of muscles in reptiles and mammals) remains essentially as for amphibians. (It breaks into three sheet-like layers: external oblique muscle, the internal oblique, and the transversus). More anteriorly, however, the ribs, now enlarged, penetrate and alter this group of muscles. The transversus is excluded from the thorax and the external and internal obliques become, respectively, the external and internal intercostal muscles, which contribute to the new function of ventilation of the lungs.[well established][VHOG]") AnnotationAssertion( "They extend from the tubercles of the ribs behind, to the cartilages of the ribs in front, where they end in thin membranes, the anterior intercostal membranes, which are continued forward to the sternum. Each arises from the lower border of a rib, and is inserted into the upper border of the rib below. In the two lower spaces they extend to the ends of the cartilages, and in the upper two or three spaces they do not quite reach the ends of the ribs. They are thicker than the Intercostales interni, and their fibers are directed obliquely downward and laterally on the back of the thorax, and downward, forward, and medially on the front (the example is often used of sticking one's hands in their pocket and noting the direction of the fingers pointing downward and medially)") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0000465") AnnotationAssertion( "EHDAA:8260") AnnotationAssertion( "EMAPA:18522") AnnotationAssertion( "FMA:9756") AnnotationAssertion( "MA:0002325") AnnotationAssertion( "NCIT:C32561") AnnotationAssertion(Annotation( "ncithesaurus:External_Intercostal_Muscle") "UMLS:C1744535") AnnotationAssertion( "VHOG:0000904") AnnotationAssertion(Annotation( "MA:0002325") "intercostales externus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "external intercostal muscle") AnnotationAssertion(Annotation( ) "external intercostals") AnnotationAssertion(Annotation( "MA:0002325") "intercostal muscle external layer") AnnotationAssertion(Annotation( ) "intercostales externi") AnnotationAssertion(Annotation( ) "intercostales externi muscle") AnnotationAssertion(Annotation( ) "intercostales externi muscles") AnnotationAssertion(Annotation( ) "intercostalis externus") AnnotationAssertion(Annotation( ) "intercostals external") AnnotationAssertion(Annotation( ) "intercostals external muscle") AnnotationAssertion(Annotation( ) "musculi intercostales externi") AnnotationAssertion(Annotation( ) Annotation( ) "musculi intercostales externi") AnnotationAssertion( "UBERON:0005441") AnnotationAssertion(rdfs:label "external intercostal muscle") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/f/f2/Gray411.png"^^xsd:anyURI) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (abdominal external oblique muscle) AnnotationAssertion(Annotation( "ISBN:9781435464339") Annotation( "UBERON:cjm"^^xsd:string) "The lateral abdominal wall muscle that is the most superficial, immediately superficial to the internal oblique.") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000788") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0471090588 Hildebrand M, Analysis of vertebrate structure (1983) p.193") "Behind the thorax, the lateral group (of muscles in reptiles and mammals) remains essentially as for amphibians. (It breaks into three sheet-like layers: external oblique muscle, the internal oblique, and the transversus). More anteriorly, however, the ribs, now enlarged, penetrate and alter this group of muscles. The transversus is excluded from the thorax and the external and internal obliques become, respectively, the external and internal intercostal muscles, which contribute to the new function of ventilation of the lungs.[well established][VHOG]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0000469") AnnotationAssertion( "EHDAA:8248") AnnotationAssertion( "EMAPA:18162") AnnotationAssertion( "FMA:13335") AnnotationAssertion( "MA:0002345") AnnotationAssertion( "NCIT:C32567") AnnotationAssertion(Annotation( "ncithesaurus:External_Oblique_Muscle") "UMLS:C0224375") AnnotationAssertion( "VHOG:0000788") AnnotationAssertion(Annotation( "VHOG:0000788") "abdominal external oblique muscle") AnnotationAssertion(Annotation( "FMA:13335") "external abdominal oblique muscle") AnnotationAssertion(Annotation( "FMA:13335") "external oblique") AnnotationAssertion(Annotation( ) "external oblique muscle") AnnotationAssertion(Annotation( "MA:0002345") "obliquus externus abdominis") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "external abdominal oblique") AnnotationAssertion(Annotation( ) "external abdominal oblique muscle") AnnotationAssertion(Annotation( ) "external oblique") AnnotationAssertion(Annotation( ) "external oblique abdominal muscles") AnnotationAssertion(Annotation( ) "external oblique abdominis") AnnotationAssertion(Annotation( ) "external oblique abdominis muscle") AnnotationAssertion(Annotation( ) Annotation( ) "m. obliquus externus abdominis") AnnotationAssertion(Annotation( ) "oblique strength") AnnotationAssertion(Annotation( ) "obliquus abdominis externus") AnnotationAssertion(Annotation( ) "obliquus externus") AnnotationAssertion(Annotation( ) "obliquus externus abdominis") AnnotationAssertion(Annotation( ) "obliquus externus abdominis muscle") AnnotationAssertion( "UBERON:0005442") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "abdominal external oblique muscle") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/3/32/Illu_trunk_muscles.jpg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "lower 6 intercostal nerve + subcostal nerve") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (filum terminale) AnnotationAssertion(Annotation( ) "A strand of fibrous tissue in the spinal cord consisting of the filum terminale internum and the filum terminale externum.") AnnotationAssertion( "definition to be verified, wikipedia def conflicts with VHOG?") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000547") Annotation( "VHOG"^^xsd:string) Annotation( ) "The slender, thread-like continuation of the spinal cord below the origin of the lumbar nerves. [Dorian_AF, Elsevier's_encyclopaedic_dictionary_of_medicine, Part_B:_Anatomy_(1988)_Amsterdam_etc.:_Elsevier][VHOG]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0000510") AnnotationAssertion( "EHDAA:6686") AnnotationAssertion( "EMAPA:18220") AnnotationAssertion( "FMA:83977") AnnotationAssertion( "VHOG:0000547") AnnotationAssertion(Annotation( "FMA:83977") "filum terminale segment of pia mater") AnnotationAssertion(Annotation( "FMA:83977") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "pars pialis fili terminalis") AnnotationAssertion(Annotation( "FMA:83977") "terminal filum") AnnotationAssertion( "uberon") AnnotationAssertion( "coccygeal ligament") AnnotationAssertion( "UBERON:0005443") AnnotationAssertion(rdfs:label "filum terminale") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/f/f4/Gray662.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete first polar body) AnnotationAssertion( "EHDAA2:0000541") AnnotationAssertion( "FMA:18650") AnnotationAssertion(Annotation( "FMA:18650") "polocytus primarius") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005444") AnnotationAssertion(rdfs:comment "belongs in CL") AnnotationAssertion(rdfs:label "obsolete first polar body") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (segment of pes) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A segment of autopod that is part of a pes.") AnnotationAssertion(Annotation( "FMA:24993") "foot region") AnnotationAssertion( ) AnnotationAssertion( "FMA:24993") AnnotationAssertion(Annotation( "FMA:24993") "foot subdivision") AnnotationAssertion(Annotation( "FMA:24993") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "regio pedis") AnnotationAssertion(Annotation( "FMA:24993") "segment of foot") AnnotationAssertion(Annotation( "FMA:24993") "subdivision of foot") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005445") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "segment of pes") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (foramen rotundum) AnnotationAssertion(Annotation( ) "The foramen rotundum is a circular hole in the sphenoid bone that connects the middle cranial fossa and the pterygopalatine fossa.") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001543") Annotation( "VHOG"^^xsd:string) Annotation( ) "A circular hole in the sphenoid bone that connects the middle cranial fossa and the pterygopalatine fossa.vity. [Wikipedia:Foramen_rotundum][VHOG]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001543") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "PMID:1018003 Presley R, Steel FLD, On the homology of the alisphenoid. Journal of Anatomy (1976)") "It is suggested that the mammalian lamina ascendens arose from an upgrowth of the root of the quadrate ramus of the epipterygoid in cynodonts, separating foramen rotundum from foramen ovale.[well established][VHOG]") AnnotationAssertion(Annotation( "AAO"^^xsd:string) "todo - check placement of AAO class") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0000194") AnnotationAssertion( "EHDAA2:0000552") AnnotationAssertion( "EHDAA:10629") AnnotationAssertion( "EMAPA:18712") AnnotationAssertion( "FMA:53154") AnnotationAssertion( "VHOG:0001543") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "foramen rotundum of the skull") AnnotationAssertion(Annotation( ) Annotation( ) "foramen rotundum ossis sphenoidalis") AnnotationAssertion(Annotation( "VHOG:0001543") "round foramen") AnnotationAssertion( "UBERON:0005446") AnnotationAssertion(rdfs:label "foramen rotundum") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/3/35/Gray145.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete bladder fundus) AnnotationAssertion( "UBERON:0006081") AnnotationAssertion( "UBERON:0006082") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005447") AnnotationAssertion(rdfs:label "obsolete bladder fundus") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (greater omentum) AnnotationAssertion(Annotation( ) "The greater omentum (also the great omentum, omentum majus, gastrocolic omentum, epiploön, or, especially in animals, caul) is a large fold of peritoneum that hangs down from the stomach, and extends from the stomach to the posterior abdominal wall after associating with the transverse colon.") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000356") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( ) "A filmy, transparent double fold of the peritoneum, draping the transverse colon and coils of the small intestine. It is attached along the greater curvature of the stomach and the first part of the duodenum. [TFD][VHOG]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "CALOHA:TS-2073") AnnotationAssertion( "EHDAA2:0000720") AnnotationAssertion( "EHDAA:6071") AnnotationAssertion( "EMAPA:18660") AnnotationAssertion( "EV:0100085") AnnotationAssertion( "FMA:9580") AnnotationAssertion( "MA:0003128") AnnotationAssertion( "NCIT:C32697") AnnotationAssertion(Annotation( "ncithesaurus:Greater_Omentum") "UMLS:C0230259") AnnotationAssertion( "VHOG:0000356") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "caul") AnnotationAssertion(Annotation( ) "epiploic") AnnotationAssertion(Annotation( ) "epiplooen") AnnotationAssertion(Annotation( ) "epiploon") AnnotationAssertion(Annotation( ) "epiploön") AnnotationAssertion(Annotation( ) "gastrocolic omentum") AnnotationAssertion(Annotation( ) "great omentum") AnnotationAssertion(Annotation( ) "omentectomy") AnnotationAssertion(Annotation( ) "omentum majus") AnnotationAssertion(Annotation( ) Annotation( ) "omentum majus") AnnotationAssertion( "UBERON:0005448") AnnotationAssertion(rdfs:label "greater omentum") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/8/8d/Gray1035.png"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "OG") ObjectSomeValuesFrom( )) SubClassOf(Annotation( "Wikipedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "Wikipedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (greater sac) AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0004738") AnnotationAssertion( "EHDAA2_RETIRED:0000722") AnnotationAssertion( "EHDAA:2327") AnnotationAssertion( "EMAPA:16885") AnnotationAssertion( "FMA:19799") AnnotationAssertion( "MA:0000448") AnnotationAssertion( "VHOG:0000858") AnnotationAssertion(Annotation( "MA:0000448") "peritoneal cavity greater sac") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "general cavity of the abdomen") AnnotationAssertion(Annotation( ) "peritoneum of the peritoneal cavity proper") AnnotationAssertion( "UBERON:0005449") AnnotationAssertion(rdfs:label "greater sac") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/8/8d/Gray1035.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (greater sac cavity) AnnotationAssertion(Annotation( ) "The cavity in the abdomen that is inside the peritoneum but outside of the lesser sac. [WP,unvetted].") AnnotationAssertion( "EHDAA2:0000724") AnnotationAssertion( "EMAPA:16886") AnnotationAssertion( "FMA:9691") AnnotationAssertion( "VHOG:0000528") AnnotationAssertion(Annotation( "FMA:9691") "cavity of greater sac") AnnotationAssertion(Annotation( "FMA:9691") "cavum peritonei") AnnotationAssertion(Annotation( "FMA:9691") "greater peritoneal cavity") AnnotationAssertion(Annotation( "EHDAA2:0000724") "greater sac lumen") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005450") AnnotationAssertion(rdfs:label "greater sac cavity") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (segment of manus) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A segment of autopod that is part of a manus.") AnnotationAssertion(Annotation( "FMA:24945") "hand region") AnnotationAssertion( ) AnnotationAssertion( "FMA:24945") AnnotationAssertion(Annotation( "FMA:24945") "hand subdivision") AnnotationAssertion(Annotation( ) "regio manus") AnnotationAssertion(Annotation( "FMA:24945") "segment of hand") AnnotationAssertion(Annotation( "FMA:24945") "subdivision of hand") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005451") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "segment of manus") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (hepatic cord) AnnotationAssertion(Annotation( "MGI:anna"^^xsd:string) "A three-dimensional arrangement formed by plates of hepatocytes, usually one cell thick, that radiates from the center of the liver lobule; hepatic laminae are highly branched, irregular structures bordered by endothelial lined vascular spaces called hepatic sinusoids.") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37880") AnnotationAssertion( "FMA:14655") AnnotationAssertion(Annotation( "FMA:14655") "hepatic lamina") AnnotationAssertion(Annotation( "MP:MP"^^xsd:string) Annotation( ) "hepatic laminae") AnnotationAssertion(Annotation( "FMA:14655") "lamina hepatica") AnnotationAssertion(Annotation( "FMA:14655") "liver cell plate") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:14655") Annotation( ) "hepatic plate") AnnotationAssertion( "UBERON:0005452") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "hepatic cord") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (inferior mesenteric ganglion) AnnotationAssertion(Annotation( ) "A ganglion located near where the inferior mesenteric artery branches from the abdominal aorta[WP].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:GIM") AnnotationAssertion( "EHDAA2:0000818") AnnotationAssertion( "EHDAA:8948") AnnotationAssertion( "FMA:77590") AnnotationAssertion( "MA:0003103") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "ganglion mesentericum inferius") AnnotationAssertion( "UBERON:0005453") AnnotationAssertion(rdfs:label "inferior mesenteric ganglion") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/6/63/Gray848.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (abdominal internal oblique muscle) AnnotationAssertion(Annotation( "ISBN:9781435464339") Annotation( "UBERON:cjm"^^xsd:string) "The lateral abdominal wall muscle that is deep to the external oblique and superficial to the transversus.") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000789") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0471090588 Hildebrand M, Analysis of vertebrate structure (1983) p.193") "Behind the thorax, the lateral group (of muscles in reptiles and mammals) remains essentially as for amphibians. (It breaks into three sheet-like layers: external oblique muscle, the internal oblique, and the transversus). More anteriorly, however, the ribs, now enlarged, penetrate and alter this group of muscles. The transversus is excluded from the thorax and the external and internal obliques become, respectively, the external and internal intercostal muscles, which contribute to the new function of ventilation of the lungs.[well established][VHOG]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0000879") AnnotationAssertion( "EHDAA:8250") AnnotationAssertion( "EMAPA:18163") AnnotationAssertion( "FMA:13891") AnnotationAssertion( "MA:0002346") AnnotationAssertion( "NCIT:C32857") AnnotationAssertion(Annotation( "ncithesaurus:Internal_Oblique_Muscle") "UMLS:C1512878") AnnotationAssertion( "VHOG:0000789") AnnotationAssertion(Annotation( "VHOG:0000789") "abdominal internal oblique muscle") AnnotationAssertion(Annotation( "FMA:13891") "internal oblique") AnnotationAssertion(Annotation( "MA:0002346") "obliquus internus abdominis") AnnotationAssertion(Annotation( "FMA:13891") "obliquus internus abdominis muscle") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "abdominal internal oblique") AnnotationAssertion(Annotation( ) "internal abdominal oblique") AnnotationAssertion(Annotation( ) "internal abdominal oblique muscle") AnnotationAssertion(Annotation( ) "internal oblique abdominal") AnnotationAssertion(Annotation( ) "internal oblique abdominis") AnnotationAssertion(Annotation( ) "internal oblique abdominis muscle") AnnotationAssertion(Annotation( ) "internal oblique muscle") AnnotationAssertion(Annotation( ) "musculus obliquus internus abdominis") AnnotationAssertion(Annotation( ) "obliqui internus") AnnotationAssertion(Annotation( ) "obliquus internus") AnnotationAssertion(Annotation( ) "obliquus internus abdominis") AnnotationAssertion(Annotation( ) Annotation( ) "obliquus internus abdominis") AnnotationAssertion(Annotation( ) "obliquus internus abdominis muscle") AnnotationAssertion( "UBERON:0005454") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "abdominal internal oblique muscle") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/3/32/Illu_trunk_muscles.jpg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "Inguinal ligament Iliac crest and the Lumbodorsal fascia.") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "Linea alba Xiphoid process and the inferior ribs.") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "Linea alba Xiphoid process and the inferior ribs.") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (interventricular groove) AnnotationAssertion(Annotation( ) "Either of the anterior and posterior grooves on the surface of the heart that lie over the interventricular septum and join at the apex.") AnnotationAssertion( ) AnnotationAssertion( "EHDAA:1918") AnnotationAssertion( "EMAPA:17336") AnnotationAssertion( "FMA:7223") AnnotationAssertion( "RETIRED_EHDAA2:0000884") AnnotationAssertion( "VHOG:0000790") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:7223") "interventricular sulcus") AnnotationAssertion( "UBERON:0005455") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "interventricular groove") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (jugular foramen) AnnotationAssertion(Annotation( ) "The jugular foramen is a large aperture in the base of the skull. It is located behind the carotid canal and is formed in front by the petrous portion of the temporal, and behind by the occipital; it is generally larger on the right than on the left side.") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0000249") Annotation( "AAO"^^xsd:string) Annotation( "AAO:LAP"^^xsd:string) "Large foramen that houses the glossopharyngeal and vagus nerves and is located inside the condyloid fossa.[AAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001113") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( ) "One of a pair of openings between the lateral part of the occipital bone and the petrous part of the temporal bones in the skull. The foramen contains the inferior petrosal sinus; the transverse sinus; some meningeal branches of the occipital and ascending pharyngeal arteries; and the glossopharyngeal, vagus, and accessory nerves. [Free_Online_Medical_Dictionary]") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0000249") Annotation( "AAO"^^xsd:string) "relationship loss: subclass braincase and otic capsule opening (AAO:0000051)[AAO]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0000249") AnnotationAssertion( "EHDAA2:0000893") AnnotationAssertion( "EHDAA:10631") AnnotationAssertion( "EMAPA:18713") AnnotationAssertion( "FMA:56432") AnnotationAssertion( "NCIT:C12496") AnnotationAssertion(Annotation( "ncithesaurus:Jugular_Foramen") "UMLS:C0222712") AnnotationAssertion( "VHOG:0001113") AnnotationAssertion(Annotation( "FMA:56432") "Posterior lacerate foramen") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "foramen jugulare") AnnotationAssertion( "UBERON:0005456") AnnotationAssertion(rdfs:label "jugular foramen") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/f/fa/Foramenjugulare.PNG"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (left thymus lobe) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A thymus lobe that is in the left side of a thymus.") AnnotationAssertion( "https://github.com/obophenotype/uberon/wiki/Modeling-paired-structures-Design-Pattern"^^xsd:anyURI) AnnotationAssertion( ) AnnotationAssertion( "FMA:71195") AnnotationAssertion( "RETIRED_EHDAA2:0000964") AnnotationAssertion(Annotation( "FMA:71195") "left lobe of thymus") AnnotationAssertion(Annotation( "FMA:71195") "left thymic lobe") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005457") AnnotationAssertion(rdfs:label "left thymus lobe") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (left umbilical artery) AnnotationAssertion( "EHDAA2:0000966") AnnotationAssertion( "EMAPA:16544") AnnotationAssertion( "FMA:18822") AnnotationAssertion( "VHOG:0000522") AnnotationAssertion(Annotation( "VHOG:0000522") "embryonic left umbilical artery") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005458") AnnotationAssertion(rdfs:label "left umbilical artery") SubClassOf( ) SubClassOf(Annotation( "check this") Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "check this") Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (left umbilical vein) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An umbilical vein that is in the left side of a multicellular organism.") AnnotationAssertion( "https://github.com/obophenotype/uberon/wiki/Modeling-paired-structures-Design-Pattern"^^xsd:anyURI) AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0000967") AnnotationAssertion( "EMAPA:16358") AnnotationAssertion( "EMAPA:16377") AnnotationAssertion( "FMA:70320") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005459") AnnotationAssertion(rdfs:label "left umbilical vein") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (left vitelline vein) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A vitelline vein that is in the left side of a multicellular organism.") AnnotationAssertion( "https://github.com/obophenotype/uberon/wiki/Modeling-paired-structures-Design-Pattern"^^xsd:anyURI) AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0000971") AnnotationAssertion( "EMAPA:16380") AnnotationAssertion( "EMAPA:16698") AnnotationAssertion( "FMA:70307") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005460") AnnotationAssertion(rdfs:label "left vitelline vein") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (levator scapulae muscle) AnnotationAssertion(Annotation( ) "An axial muscle that originates in the cervical vertebraae inserts on the scapula.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010689") AnnotationAssertion( "EHDAA2:0000992") AnnotationAssertion( "EHDAA:8309") AnnotationAssertion( "FMA:32519") AnnotationAssertion(Annotation( "FMA:32519") "levator scapulae") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "levator scapula") AnnotationAssertion(Annotation( ) "levator scapulae muscle") AnnotationAssertion(Annotation( ) "levator scapulæ") AnnotationAssertion(Annotation( ) Annotation( ) "musculus levator scapulae") AnnotationAssertion( "UBERON:0005461") AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "Axial muscle group[Kardong]") AnnotationAssertion(rdfs:label "levator scapulae muscle") AnnotationAssertion( "Levator:scapulae.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "cervical nerve and dorsal scapular nerve") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "Posterior tubercles of transverse processes of C1 - C4 vertebrae") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "Superior part of medial border of scapula") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (lower back) AnnotationAssertion(Annotation( "FMA:61681") "Subdivision of abdominal segment of trunk which in humans is demarcated from the front of the abdomen by the posterior surface of the anterior layer of the thoracolumbar fascia and the anterior surface of the lumbar vertebral column; together with the front of the abdomen, it constitutes the abdomen[Modified from FMA].") AnnotationAssertion( "lumbar") AnnotationAssertion(Annotation( "FMA:61681") "lumbar region") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0001505") AnnotationAssertion( "EMAPA:36623") AnnotationAssertion( "FMA:61681") AnnotationAssertion( "MA:0000027") AnnotationAssertion( "NCIT:C34004") AnnotationAssertion(Annotation( "ncithesaurus:Lumbar_Region") "UMLS:C0024090") AnnotationAssertion(Annotation( "FMA:61681") "abdominal back") AnnotationAssertion(Annotation( "FMA:61681") "back of abdomen") AnnotationAssertion(Annotation( "FMA:61681") "dorsum of abdomen") AnnotationAssertion(Annotation( "MA:0000027") "lower back") AnnotationAssertion(Annotation( "FMA:61681") "lumbar part of back") AnnotationAssertion(Annotation( ) "lumbar region of back") AnnotationAssertion(Annotation( "FMA:61681") "posterior part of abdomen") AnnotationAssertion(Annotation( "FMA:61681") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "regio lumbalis") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( "BTO:0001505") "loin") AnnotationAssertion( "lombus") AnnotationAssertion( "lumbos") AnnotationAssertion( "UBERON:0005462") AnnotationAssertion(rdfs:comment "overlaps with region sometimes called 'loin'") AnnotationAssertion(rdfs:label "lower back") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "MA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (subcapsular sinus of lymph node) AnnotationAssertion(Annotation( ) "A space between the capsule and the cortex which allows the free movement of lymphatic fluid and so contains a sparsity of lymphocytes. It is continuous with the similar lymph sinuses that flank the trabeculae.") AnnotationAssertion(Annotation( ) "marginal sinus") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37662") AnnotationAssertion( "FMA:312355") AnnotationAssertion( "MA:0003027") AnnotationAssertion( "NCIT:C33033") AnnotationAssertion( "NCIT:C33642") AnnotationAssertion(Annotation( "ncithesaurus:Lymph_Node_Sinus") "UMLS:C1518051") AnnotationAssertion(Annotation( "ncithesaurus:Lymph_Node_Subcapsular_Sinus") "UMLS:C1518052") AnnotationAssertion(Annotation( "MA:0003027") "lymph node subcortical sinus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "lymph path") AnnotationAssertion(Annotation( ) "lymph sinus") AnnotationAssertion(Annotation( ) "marginal sinus of lymph node") AnnotationAssertion(Annotation( ) "subcapsular sinus") AnnotationAssertion( "UBERON:0005463") AnnotationAssertion(rdfs:label "subcapsular sinus of lymph node") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/6/68/Gray597.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (median sacral artery) AnnotationAssertion(Annotation( ) "The median sacral artery (or middle sacral artery) is a small vessel, which arises from the back of the aorta, a little above its bifurcation. It descends in the middle line in front of the fourth and fifth lumbar vertebræ, the sacrum and coccyx, and ends in the glomus coccygeum (coccygeal gland). From it, minute branches are said to pass to the posterior surface of the rectum. On the last lumbar vertebra it anastomoses with the lumbar branch of the iliolumbar artery; in front of the sacrum it anastomoses with the lateral sacral arteries, and sends offsets into the anterior sacral foramina. It is crossed by the left common iliac vein, and is accompanied by a pair of venæ comitantes; these unite to form a single vessel, which opens into the left common iliac vein.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0001087") AnnotationAssertion( "EHDAA:2556") AnnotationAssertion( "EMAPA:19214") AnnotationAssertion( "FMA:14757") AnnotationAssertion( "VHOG:0000756") AnnotationAssertion(Annotation( "FMA:14757") "Middle sacral artery") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "arteria sacralis mediana") AnnotationAssertion(Annotation( ) "coccygeal branches") AnnotationAssertion(Annotation( ) "middle sacral") AnnotationAssertion(Annotation( ) "middle sacral artery") AnnotationAssertion( "UBERON:0005464") AnnotationAssertion(rdfs:label "median sacral artery") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/a/af/Gray531.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obturator nerve) AnnotationAssertion(Annotation( ) "The obturator nerve arises from the ventral divisions of the second, third, and fourth lumbar nerves; the branch from the third is the largest, while that from the second is often very small.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0001282") AnnotationAssertion( "EHDAA:5657") AnnotationAssertion( "FMA:16487") AnnotationAssertion( "MESH:D009776") AnnotationAssertion( "NCIT:C75909") AnnotationAssertion(Annotation( "ncithesaurus:Obturator_Nerve") "UMLS:C0028783") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "nervus obturatorius") AnnotationAssertion( "UBERON:0005465") AnnotationAssertion(rdfs:label "obturator nerve") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/b/b7/Gray344.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (platysma) AnnotationAssertion(Annotation( "MFMO:0000059") "The platysma is a pharyngeal arch 2 muscle and a superficial facial muscle that participates in oral/pharyngeal behaviors and is innervated by the cervical branch of the facial nerve. It attaches to the mandible and it attaches to the skin of the head, neck, and thoracic region where it is found superficial to the clavicle. Burrows et al. (2011) argue that in hylobatids (and, presumably, other primates) the platysma in the region of the modiolus represents both the cervicale and myoides muscles.") AnnotationAssertion(Annotation( "2012-07-02"^^xsd:string) Annotation( "FEED"^^xsd:string) Annotation( "http://www.feedexp.org"^^xsd:string) "The platysma is a pharyngeal arch 2 muscle and a superficial facial muscle that participates in oral/pharyngeal behaviors and is innervated by the cervical branch of the facial nerve, and attaches to the skin.[FEED]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000931") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0072528305 Kardong KV, Vertebrates: Comparative Anatomy, Function, Evolution (2006) p.398") "One of these (facial muscles in mammals), the platysma, is an unspecialized muscle derived from the hyoid arch.[well established][VHOG]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0005124") AnnotationAssertion( "EHDAA2:0001474") AnnotationAssertion( "EHDAA:8270") AnnotationAssertion( "EMAPA:18190") AnnotationAssertion( "FMA:45738") AnnotationAssertion( "MA:0003026") AnnotationAssertion( "MFMO:0000059") AnnotationAssertion( "NCIT:C33329") AnnotationAssertion(Annotation( "ncithesaurus:Platysma_Myoides") "UMLS:C1514163") AnnotationAssertion( "VHOG:0000931") AnnotationAssertion(Annotation( "BTO:0005124") "platysma muscle") AnnotationAssertion(Annotation( ) Annotation( ) "platysma cervicale") AnnotationAssertion(Annotation( ) Annotation( ) "platysma myoides") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0005124") "neck platysma muscle") AnnotationAssertion( "UBERON:0005467") AnnotationAssertion(rdfs:comment "Human variation notes: Variations occur in the extension over the face and over the clavicle and shoulder; it may be absent or interdigitate with the muscle of the opposite side in front of the neck; attachment to clavicle, mastoid process or occipital bone occurs. A more or less independent fasciculus, the occipitalis minor, may extend from the fascia over the trapezius to fascia over the insertion of the sternocleidomastoideus.") AnnotationAssertion(rdfs:label "platysma") AnnotationAssertion(rdfs:seeAlso "https://github.com/obophenotype/uberon/issues/472"^^xsd:anyURI) AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/f/fb/Platysma.png"^^xsd:anyURI) SubClassOf(Annotation( "FEED"^^xsd:string) ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "cervical branch of the facial nerve") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "base of mandible; skin of cheek and lower lip; angle of mouth; orbicularis oris") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "base of mandible; skin of cheek and lower lip; angle of mouth; orbicularis oris") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (right thymus lobe) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A thymus lobe that is in the right side of a thymus.") AnnotationAssertion( "https://github.com/obophenotype/uberon/wiki/Modeling-paired-structures-Design-Pattern"^^xsd:anyURI) AnnotationAssertion( ) AnnotationAssertion( "FMA:71194") AnnotationAssertion( "RETIRED_EHDAA2:0001758") AnnotationAssertion(Annotation( "FMA:71194") "right lobe of thymus") AnnotationAssertion(Annotation( "FMA:71194") "right thymic lobe") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005469") AnnotationAssertion(rdfs:label "right thymus lobe") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (right umbilical artery) AnnotationAssertion( "EHDAA2:0001760") AnnotationAssertion( "EMAPA:16545") AnnotationAssertion( "FMA:18821") AnnotationAssertion( "VHOG:0000523") AnnotationAssertion(Annotation( "VHOG:0000523") "embryonic right umbilical artery") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005470") AnnotationAssertion(rdfs:label "right umbilical artery") SubClassOf( ) SubClassOf(Annotation( "check this") Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "check this") Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (right umbilical vein) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An umbilical vein that is in the right side of a multicellular organism.") AnnotationAssertion( "https://github.com/obophenotype/uberon/wiki/Modeling-paired-structures-Design-Pattern"^^xsd:anyURI) AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0001761") AnnotationAssertion( "EMAPA:16359") AnnotationAssertion( "EMAPA:16378") AnnotationAssertion( "FMA:70319") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005471") AnnotationAssertion(rdfs:label "right umbilical vein") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (right vitelline vein) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A vitelline vein that is in the right side of a multicellular organism.") AnnotationAssertion( "https://github.com/obophenotype/uberon/wiki/Modeling-paired-structures-Design-Pattern"^^xsd:anyURI) AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0001766") AnnotationAssertion( "EMAPA:16381") AnnotationAssertion( "EMAPA:16699") AnnotationAssertion( "FMA:70306") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005472") AnnotationAssertion(rdfs:label "right vitelline vein") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (sacral region) AnnotationAssertion(Annotation( ) "A subdivision of an organism along the anterior-posterior axis in the pelvic region immediately posterior to the lumbar region and anterior to the caudal region. Sometimes an intermediate region is defined between the sacral and caudal.") AnnotationAssertion( "pygal") AnnotationAssertion( "sacral") AnnotationAssertion( "Amphibians - 1 sacral vertebra; Living reptiles & most birds - 2 sacral vertebrae; Most mammals - 3 to 5 sacral vertebrae. TODO - split sacral from sacrococcygeal") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:24228") AnnotationAssertion(Annotation( "FMA:24228") "back of pelvis") AnnotationAssertion(Annotation( "FMA:24228") "pelvic back") AnnotationAssertion(Annotation( "FMA:24228") "posterior part of pelvis") AnnotationAssertion(Annotation( "FMA:24228") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "regio sacralis") AnnotationAssertion(Annotation( "FMA:24228") "sacral part of pelvis") AnnotationAssertion(Annotation( ) Annotation( ) "croup") AnnotationAssertion(Annotation( ) Annotation( ) "hindquarter") AnnotationAssertion(Annotation( ) Annotation( ) "rump") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005473") AnnotationAssertion(rdfs:label "sacral region") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete second polar body) AnnotationAssertion( "EHDAA2:0001820") AnnotationAssertion( "FMA:18651") AnnotationAssertion(Annotation( "FMA:18651") "polocytus secundarius") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005474") AnnotationAssertion(rdfs:comment "belongs in CL") AnnotationAssertion(rdfs:label "obsolete second polar body") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (sigmoid sinus) AnnotationAssertion(Annotation( ) Annotation( ) "A portion of the lateral venous sinus, bulging prominently into the mastoid cavity, that serves as a principal conduit by which blood leaves the cranium[EPIC]. The sigmoid is drained by the internal jugular vein.") AnnotationAssertion(Annotation( ) "The sigmoid sinuses, within a human head, are 2 areas beneath the brain, which allow blood veins to span the area, from the center of the head downward. They drain from the transverse sinuses (under the back of the brain) to the internal jugular vein. Each sigmoid sinus begins beneath the temporal bone and follows a tortuous course to the jugular foramen, at which point the sinus becomes continuous with the internal jugular vein[Wikipedia:Sigmoid_sinus].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0001838") AnnotationAssertion( "EHDAA:9880") AnnotationAssertion( "EMAPA:19060") AnnotationAssertion( "FMA:50782") AnnotationAssertion( "VHOG:0001337") AnnotationAssertion( "ncithesaurus:Sigmoid_Sinus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "sulcus sigmoideus") AnnotationAssertion( "UBERON:0005475") AnnotationAssertion(rdfs:label "sigmoid sinus") AnnotationAssertion( "Gray488:blue.gif"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "Palaeos") ObjectSomeValuesFrom( )) # Class: (spinal nerve trunk) AnnotationAssertion(Annotation( ) "Trunk part of spinal nerve, where dorsal and ventral roots meet to form the spinal nerve, before branching off to dorsal and ventral rami.") AnnotationAssertion( "EHDAA2:0001900") AnnotationAssertion( "FMA:5929") AnnotationAssertion(Annotation( "FMA:5929") "spinal nerve (trunk)") AnnotationAssertion(Annotation( "FMA:5929") "spinal neural trunk") AnnotationAssertion(Annotation( "FMA:5929") "trunk of spinal nerve") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005476") AnnotationAssertion(rdfs:label "spinal nerve trunk") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (stomach fundus epithelium) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A simple columnar epithelium that is part of a fundus of stomach.") AnnotationAssertion( "EHDAA2:0001921") AnnotationAssertion( "EMAPA:17888") AnnotationAssertion( "FMA:17277") AnnotationAssertion( "VHOG:0000878") AnnotationAssertion(Annotation( "FMA:17277") "epithelium of fundus of stomach") AnnotationAssertion(Annotation( "FMA:17277") "gastric epithelium of fundus") AnnotationAssertion(Annotation( "FMA:17277") "gastric fundus epithelium") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005477") AnnotationAssertion(rdfs:label "stomach fundus epithelium") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (sulcus limitans of neural tube) AnnotationAssertion(Annotation( ) Annotation( ) "A longitudinal groove in the neural tube wall that divides the neural tube into dorsal (alar) and ventral (basal) halves (dorsal receives input from sensory neurons, ventral effects motor functions); stretches from the mesencephalon caudad[TMD].") AnnotationAssertion( "sulcus limitans") AnnotationAssertion( ) AnnotationAssertion( "BAMS:slim") AnnotationAssertion( "BAMS:slm") AnnotationAssertion(Annotation( "EHDAA2:0001265") "neural tube lateral wall sulcus limitans") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005478") AnnotationAssertion(rdfs:label "sulcus limitans of neural tube") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) DisjointClasses( ) # Class: (superior mesenteric ganglion) AnnotationAssertion(Annotation( ) "A ganglion in the upper part of the superior mesenteric plexus that is the synapsing point for one of the pre- and post-synaptic nerves of the sympathetic division of the autonomous nervous system.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:GSM") AnnotationAssertion( "EHDAA2:0001950") AnnotationAssertion( "EHDAA:8950") AnnotationAssertion( "FMA:77589") AnnotationAssertion( "MA:0003102") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "ganglion mesentericum superius") AnnotationAssertion(Annotation( ) Annotation( ) "ganglion mesentericum superius") AnnotationAssertion(Annotation( ) "superior mesenteric ganglia") AnnotationAssertion( "UBERON:0005479") AnnotationAssertion(rdfs:label "superior mesenteric ganglion") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/f/f7/Gray839.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (superior orbital fissure) AnnotationAssertion(Annotation( ) "The orbital fissure that is situated superiorly between the greater wing and the lesser wing of the sphenoid bone.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0001952") AnnotationAssertion( "EHDAA:10650") AnnotationAssertion( "EMAPA:18718") AnnotationAssertion( "FMA:54799") AnnotationAssertion( "VHOG:0000553") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "fissura orbitalis superior") AnnotationAssertion(Annotation( ) Annotation( ) "fissura orbitalis superior") AnnotationAssertion(Annotation( ) "sphenoidal fissure") AnnotationAssertion( "supraorbital fissure") AnnotationAssertion( "UBERON:0005480") AnnotationAssertion(rdfs:label "superior orbital fissure") AnnotationAssertion( "Orbita:mensch.jpg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (tentorial sinus) AnnotationAssertion(Annotation( ) "An unpaired venous dural sinus that receives blood from the superior cerebellar veins and inferior sagittal sinus and drains into the confluence of sinuses.") AnnotationAssertion(Annotation( "NCIT") "retired in NCIT") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0002003") AnnotationAssertion( "EHDAA:9882") AnnotationAssertion( "FMA:50769") AnnotationAssertion( "ncithesaurus:Straight_Sinus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "rectus sinus") AnnotationAssertion(Annotation( ) Annotation( ) "sinus rectus") AnnotationAssertion(Annotation( ) "straight sinus") AnnotationAssertion(Annotation( ) "straight sinus vein") AnnotationAssertion( "UBERON:0005481") AnnotationAssertion(rdfs:label "tentorial sinus") AnnotationAssertion( "Gray488:blue.gif"^^xsd:anyURI) SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (obsolete region of thorax) AnnotationAssertion( "FMA:20358") AnnotationAssertion( "SCTID:425803006") AnnotationAssertion(Annotation( "FMA:20358") "subdivision of thorax") AnnotationAssertion(Annotation( "FMA:20358") "thoracic region") AnnotationAssertion(Annotation( "FMA:20358") "thoracic subdivision") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005482") AnnotationAssertion(rdfs:label "obsolete region of thorax") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (thymus lobe) AnnotationAssertion(Annotation( ) "Either of the two lateral lobes that constitute the thymus.") AnnotationAssertion( "each lobe of the thymus can be divided into a central medulla and a peripheral cortex which is surrounded by an outer capsule. Each lobe is composed of numerous lobules held together by delicate areolar tissue; the entire organ being enclosed in an investing capsule of a similar but denser structure. The primary lobules vary in size from that of a pin's head to that of a small pea, and are made up of a number of small nodules or follicles.[WP]") AnnotationAssertion( "FMA:71193") AnnotationAssertion( "RETIRED_EHDAA2:0002021") AnnotationAssertion(Annotation( ) "lateral lobe of thymus") AnnotationAssertion(Annotation( "FMA:71193") "lobe of thymus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005483") AnnotationAssertion(rdfs:label "thymus lobe") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA-abduced-lr"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (tricuspid valve leaflet) AnnotationAssertion(Annotation( ) "A valve leaflet that is part of a tricuspid valve.") AnnotationAssertion(Annotation( "FMA:7237") "Leaf of caridac valve which has as its parts the anterior, posterior and septal leaflets that is is attached to the chorda tendinea of the right ventricle and the fibrous ring of tricuspid valve.") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000821") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "DOI:10.1161/CIRCRESAHA.109.201566 Combs MD, Yutzey KE, Heart valve development. Circulatory Research (2009)") "The mature AV (atrioventricular) valve of the adult zebrafish 2-chambered heart is structurally similar to the mammalian AV valves with stratified ECM (extracellular matrix) and supporting chordae tendineae. Therefore, the major cellular and molecular events of valve development are largely conserved among animals with hearts composed of multiple chambers.[uncertain][VHOG]") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:18630") AnnotationAssertion( "FMA:7237") AnnotationAssertion( "MA:0003180") AnnotationAssertion( "RETIRED_EHDAA2:0002082") AnnotationAssertion( "VHOG:0000821") AnnotationAssertion(Annotation( "FMA:7237") "leaflet of tricuspid valve") AnnotationAssertion(Annotation( "FMA:7237") "tricuspid valve leaflet") AnnotationAssertion(Annotation( "VHOG:0000821") "tricuspid valve leaflets") AnnotationAssertion(Annotation( "FMA:7237") "tricuspid valvular leaflet") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005484") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "tricuspid valve leaflet") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (valve of inferior vena cava) AnnotationAssertion(Annotation( ) Annotation( "ISBN:0-683-40008-8"^^xsd:string) Annotation( "MP:0010490") "The semicircular fold of endocardium located on the right atrium at the point of attachment of the inferior vena cava; during development this valve helps direct the flow of oxygen-rich blood through the right atrium into the left cardiac atrium via the foramen ovale (preventing blood flowing into the right ventricle).") AnnotationAssertion( "this class should be subdivided into the embryonic structure and the vestigial adult remnant, a small endocardialfold") AnnotationAssertion(Annotation( "FMA:9240") "Vestigial cardiac valve which is continuous with the valve of the coronary sinus and the crista terminalis.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0002166") AnnotationAssertion( "EHDAA:8631") AnnotationAssertion( "FMA:9240") AnnotationAssertion( "NCIT:C32544") AnnotationAssertion(Annotation( "ncithesaurus:Eustachian_Valve") "UMLS:C0225848") AnnotationAssertion(Annotation( "FMA:9240") "eustachean valve") AnnotationAssertion(Annotation( "FMA:9240") "eustachian valve") AnnotationAssertion(Annotation( "FMA:9240") "inferior vena cava valve") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "valve of the inferior vena cava") AnnotationAssertion(Annotation( ) Annotation( ) "valvula venae cavae inferioris") AnnotationAssertion( "UBERON:0005485") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "valve of inferior vena cava") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/6/6c/Gray493.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (venous dural sinus) AnnotationAssertion(Annotation( ) "A venous channel found between layers of dura mater in the brain. Receives blood from internal and external veins of the brain, receive cerebrospinal fluid (CSF) from the subarachnoid space, and ultimately empty into the internal jugular vein.") AnnotationAssertion( "the MA placement should be checked") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0002169") AnnotationAssertion( "EHDAA:6491") AnnotationAssertion( "EMAPA:18634") AnnotationAssertion( "FMA:50762") AnnotationAssertion( "MA:0002113") AnnotationAssertion( "NCIT:C102627") AnnotationAssertion( "VHOG:0001004") AnnotationAssertion(Annotation( "FMA:50762") "cranial dural venous sinus") AnnotationAssertion(Annotation( "FMA:50762") "dural sinus") AnnotationAssertion(Annotation( "MA:0002113") "dural vein") AnnotationAssertion(Annotation( "FMA:50762") "dural venous sinus") AnnotationAssertion(Annotation( "EHDAA:6491") "venous dural") AnnotationAssertion(Annotation( "EHDAA2:0002169") "venous dural sinus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "s. durae matris") AnnotationAssertion( "UBERON:0005486") AnnotationAssertion(rdfs:label "venous dural sinus") AnnotationAssertion( "Gray488:blue.gif"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (vitelline vein) AnnotationAssertion(Annotation( "MGI:csmith"^^xsd:string) Annotation( "MP:0010666") "The paired veins that carry blood from the yolk sac back to the embryo.") AnnotationAssertion(Annotation( "XAO") Annotation( "XAO:0004147") "One of two veins that run upward at first in front, and subsequently on either side of the intestinal canal. They unite on the ventral aspect of the canal, and beyond this are connected to one another by two anastomotic branches, one on the dorsal, and the other on the ventral aspect of the duodenal portion of the intestine, which is thus encircled by two venous rings; into the middle or dorsal anastomosis the superior mesenteric vein opens. The portions of the veins above the upper ring become interrupted by the developing liver and broken up by it into a plexus of small capillary-like vessels termed sinusoids.[XAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000401") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0072528305 Kardong KV, Vertebrates: Comparative Anatomy, Function, Evolution (2006) p.460") "Within each vertebrate group, the veins compose a few main functional systems that arise embryologically from what seems to be a common developmental pattern. (...) Early in development, three major sets of paired veins are present: the vitelline veins from the yolk sac, the cardinal veins from the body of the embryo itself, and the lateral abdominal veins from the pelvic region. The paired vitelline veins are among the first vessels to appear in the embryo. They arise over the yolk and follow the yolk stalk into the body. They then turn anteriorly, continue along the gut, and enter the sinus venosus.[well established][VHOG]") AnnotationAssertion(Annotation( "XAO"^^xsd:string) "check zfa (no text def). Check vitelline/omphalomesenteric distinction in XAO") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:36021") AnnotationAssertion( "FMA:70305") AnnotationAssertion( "NCIT:C34329") AnnotationAssertion( "RETIRED_EHDAA2:0002209") AnnotationAssertion(Annotation( "ncithesaurus:Vitelline_Vein") "UMLS:C0231091") AnnotationAssertion( "VHOG:0000401") AnnotationAssertion( "XAO:0000376") AnnotationAssertion( "XAO:0004147") AnnotationAssertion(Annotation( "VHOG:0000401") "embryonic vitelline vein") AnnotationAssertion(Annotation( "XAO:0004147") "vascular vitelline network") AnnotationAssertion(Annotation( ) Annotation( ) "vena vitellina") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "EMAPA:16244") "omphalomesenteric vein") AnnotationAssertion( "vein of omphalomesenteric system") AnnotationAssertion(Annotation( "XAO:0004147") Annotation( ) "vitelline veins") AnnotationAssertion( "UBERON:0005487") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "vitelline vein") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/7/7e/Gray475.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (superior mesenteric plexus) AnnotationAssertion(Annotation( ) "The superior mesenteric plexus is a continuation of the lower part of the celiac plexus, receiving a branch from the junction of the right vagus nerve with the plexus. It surrounds the superior mesenteric artery, accompanies it into the mesentery, and divides into a number of secondary plexuses, which are distributed to all the parts supplied by the artery, viz. , pancreatic branches to the pancreas; intestinal branches to the small intestine; and ileocolic, right colic, and middle colic branches, which supply the corresponding parts of the great intestine. The nerves composing this plexus are white in color and firm in texture; in the upper part of the plexus close to the origin of the superior mesenteric artery is the superior mesenteric ganglion.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:6639") AnnotationAssertion(Annotation( ) Annotation( ) "plexus mesentericus superior") AnnotationAssertion(Annotation( "FMA:6639") "superior mesenteric nerve plexus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005488") AnnotationAssertion(rdfs:label "superior mesenteric plexus") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/6/63/Gray848.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (anterior interventricular sulcus) AnnotationAssertion(Annotation( ) "The ventricles of the heart are separated by two grooves, one of which, the anterior longitudinal sulcus (or anterior interventricular sulcus), is situated on the sternocostal surface of the heart, close to its left margin. The other groove separating the ventricles is the posterior interventricular sulcus.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:7177") AnnotationAssertion(Annotation( "FMA:7177") "anterior interventricular groove") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "anterior interventricular groove") AnnotationAssertion(Annotation( ) "anterior longitudinal sulcus") AnnotationAssertion(Annotation( ) Annotation( ) "sulcus interventricularis anterior") AnnotationAssertion( "UBERON:0005489") AnnotationAssertion(rdfs:label "anterior interventricular sulcus") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/4/46/Gray492.png"^^xsd:anyURI) SubClassOf(Annotation( "FMA"^^xsd:string) ) DisjointClasses(Annotation( "lexical"^^xsd:string) ) # Class: (posterior interventricular sulcus) AnnotationAssertion(Annotation( ) "The ventricles are separated by two grooves, one of which, the anterior longitudinal sulcus, is situated on the sternocostal surface of the heart, close to its left margin, the other posterior longitudinal sulcus (posterior interventricular sulcus, inferior interventricular groove), on the diaphragmatic surface near the right margin. In it run the posterior interventricular artery and middle cardiac vein.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:7178") AnnotationAssertion(Annotation( "FMA:7178") "diaphragmatic interventricular groove") AnnotationAssertion(Annotation( "FMA:7178") "inferior interventricular groove") AnnotationAssertion(Annotation( "FMA:7178") "posterior interventricular groove") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "posterior interventricular groove") AnnotationAssertion(Annotation( ) "posterior longitudinal sulci") AnnotationAssertion(Annotation( ) "posterior longitudinal sulcus") AnnotationAssertion(Annotation( ) Annotation( ) "sulcus interventricularis anterior") AnnotationAssertion( "UBERON:0005490") AnnotationAssertion(rdfs:label "posterior interventricular sulcus") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/5/5f/Gray491.png"^^xsd:anyURI) SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (glossopharyngeal neural crest) AnnotationAssertion(Annotation( "ZFA:0007066") "Cranial neural crest which gives rise to the glossopharyngeal ganglion.") AnnotationAssertion( "EHDAA2:0000714") AnnotationAssertion( "EHDAA:660") AnnotationAssertion( "TAO:0007066") AnnotationAssertion( "ZFA:0007066") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005491") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "glossopharyngeal neural crest") SubClassOf( ) # Class: (hyaloid vessel) AnnotationAssertion(Annotation( "MP:0001289") Annotation( "ZFA:0005046") "A blood vessel that is associated with the lens. In mammals, this is transient and normally nourishes the retina, immature lens and primary vitreous of the developing eye.") AnnotationAssertion( "we are currently conflating vessel and vasculature - we may wish to split this class - see also vascular plexus term. The ZFA class represents the vasculature") AnnotationAssertion( "EHDAA:4735") AnnotationAssertion( "TAO:0005046") AnnotationAssertion( "VHOG:0000232") AnnotationAssertion( "XAO:0004154") AnnotationAssertion( "ZFA:0005046") AnnotationAssertion(Annotation( "XAO:0004154") Annotation( ) "hyaloid blood vessels") AnnotationAssertion(Annotation( "TAO:0005046") Annotation( ) "hyaloid vessels") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "MP:0001289") "hyaloid capillary system") AnnotationAssertion(Annotation( "MP:0001289") "hyaloid vascular system") AnnotationAssertion(Annotation( "ZFA:0005046") "hyaloid vasculature") AnnotationAssertion( "UBERON:0005492") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "hyaloid vessel") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "ZFA-modified"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (hyoid muscle) AnnotationAssertion(Annotation( ) "One of a group of muscles used in mastication and swallowing. These muscles are attached to the hyoid bone, which is suspended in the neck and forms the base of the tongue and larynx. The muscles are divided into suprahyoid (superior) or infrahyoid (inferior) groups relative to the bone[WP, generalized].") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001494") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "DOI:10.1186/1471-213X-8-24 Diogo R, Hinits Y, Hughes SM, Development of mandibular, hyoid and hypobranchial muscles in the zebrafish: homologies and evolution of these muscles within bony fishes and tetrapods. BMC Developmental Biology (2008)") "Although the zebrafish occupies a rather derived phylogenetic position within actinopterygians and even within teleosts, with respect to the mandibular, hyoid and hypobranchial muscles it seems justified to consider it an appropriate representative of these two groups. Among these muscles, the three with clear homologues in tetrapods and the further three identified in sarcopterygian fish are particularly appropriate for comparisons of results between the actinopterygian zebrafish and the sarcopterygians.[well established][VHOG]") AnnotationAssertion( "attachment sites may vary by species; for example, in orangutans, the posterior digastric does not attach to the hyoid, but we may still consider this a (supra)hyoid muscle.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EFO:0003536") AnnotationAssertion( "EHDAA2:0000794") AnnotationAssertion( "NCIT:C32753") AnnotationAssertion( "TAO:0000521") AnnotationAssertion(Annotation( "ncithesaurus:Hyoid_Muscle") "UMLS:C0448345") AnnotationAssertion( "VHOG:0001494") AnnotationAssertion( "ZFA:0000521") AnnotationAssertion(Annotation( "ZFA:0000521") "hyoid muscles") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005493") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "hyoid muscle") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (intermediate mesenchyme) AnnotationAssertion( "EHDAA2:0000871") AnnotationAssertion( "EHDAA:689") AnnotationAssertion( "TAO:0000990") AnnotationAssertion( "VHOG:0000261") AnnotationAssertion( "ZFA:0000990") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005494") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "intermediate mesenchyme") SubClassOf( ) SubClassOf(Annotation( "ZFA"^^xsd:string) ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (midbrain lateral wall) AnnotationAssertion( "EHDAA2:0001171") AnnotationAssertion( "EHDAA:3700") AnnotationAssertion( "EMAPA:16976") AnnotationAssertion( "TAO:0000906") AnnotationAssertion( "VHOG:0000455") AnnotationAssertion( "ZFA:0000906") AnnotationAssertion(Annotation( "ZFA:0000906") "lateral wall midbrain") AnnotationAssertion(Annotation( "ZFA:0000906") "lateral wall midbrain region") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "VHOG:0000455") "lateral wall mesencephalon") AnnotationAssertion( "UBERON:0005495") AnnotationAssertion(rdfs:label "midbrain lateral wall") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (neural tube lateral wall) AnnotationAssertion(Annotation( "ZFA:0001435") "Portion of tissue on the side of the lumen of the neural tube.") AnnotationAssertion( "EHDAA2:0001257") AnnotationAssertion( "EHDAA:2873") AnnotationAssertion( "EHDAA:912") AnnotationAssertion( "EMAPA:16166") AnnotationAssertion( "TAO:0001435") AnnotationAssertion( "VHOG:0000513") AnnotationAssertion( "ZFA:0001435") AnnotationAssertion(Annotation( "ZFA:0001435") "lateral wall neural tube") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005496") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "neural tube lateral wall") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (non-neural ectoderm) AnnotationAssertion( "todo - epidermis? todo - track down EHDAA2 class in new release") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001372") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "DOI:10.1016/S0959-4388(99)00003-3 Holland LZ and Holland ND, Chordate origins of the vertebrate central nervous system. Current Opinion in Neurobiology (1999)") "In the early gastrula of vertebrates, factors from the organizer (e.g. noggin, chordin, and follistatin in Xenopus) antagonize the epidermalizing factor bone morphogenetic protein 4 (BMP4), thus dividing the epiblast into neuroectoderm. In Drosophila, decapentaplegic, the homologue of BMP4, interacts similarly with the protein short gastrulation, the homologue of chordin. Thus, a comparable molecular mechanism for distinguishing non-neural ectoderm from neural ectoderm was probably present in the common ancestor of all bilaterally symmetrical animals.[well established][VHOG]") AnnotationAssertion( "After gastrulation, neural crest cells are specified at the border of the neural plate and the non-neural ectoderm.") AnnotationAssertion( "EFO:0003643") AnnotationAssertion( "EHDAA:257") AnnotationAssertion( "EMAPA:16074") AnnotationAssertion( "RETIRED_EHDAA2:0001273") AnnotationAssertion( "TAO:0001178") AnnotationAssertion( "VHOG:0001372") AnnotationAssertion( "XAO:0004091") AnnotationAssertion( "ZFA:0001178") AnnotationAssertion(Annotation( "ZFA:0001178") "non neural ectoderm") AnnotationAssertion(Annotation( ) "epidermal ectoderm") AnnotationAssertion(Annotation( ) "epithelial ectoderm") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "surface ectoderm") AnnotationAssertion(Annotation( "ZFA:0001178") "ventral ectoderm") AnnotationAssertion( "UBERON:0005497") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "Gene notes: One of the first genes to be expressed in nonneural ectoderm in amphioxus is BMP2/4 (Panopoulou et al. 1998). BMP2/4 homologues appear to have a very ancient role in distinguishing neural from nonneural ectoderm; in Drosophila as well as in amphioxus and vertebrates, BMP2/4 homologues are expressed in nonneural ectoderm and function in distinguishing neural from nonneural ectoderm (Francois & Bier, 1995 ; Sasai et al. 1995 ; Wilson & Hemmati-Brivanlou, 1995; Panopoulou et al. 1998). A change in level of BMP2/4 from very high in nonneural ectoderm to low in neural ectoderm appears to be a key factor in development of neural crest (Baker & Bronner-Fraser,1997a,1997b;Erickson&Reedy,1998;Marchantet al.1998 ;Selleck et al. 1998).") AnnotationAssertion(rdfs:label "non-neural ectoderm") SubClassOf(Annotation( "ZFA"^^xsd:string) ) SubClassOf( ) # Class: (primitive heart tube) AnnotationAssertion(Annotation( "ZFA:0000149") "Multi-tissue structure that arises from the heart rudiment and will become the heart tube.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0001512") AnnotationAssertion( "EHDAA:424") AnnotationAssertion( "EHDAA:436") AnnotationAssertion( "EMAPA:16215") AnnotationAssertion( "FMA:321916") AnnotationAssertion( "TAO:0000149") AnnotationAssertion( "ZFA:0000149") AnnotationAssertion(Annotation( "EMAPA:16215") "primitive heart tube") AnnotationAssertion(Annotation( "EMAPA:16208") "early primitive heart tube") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005498") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "primitive heart tube") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "ZFA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (rhombomere 1) AnnotationAssertion(Annotation( "ZFA:0001031") "Hindbrain segment or neuromere 1.") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0001031") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "Hindbrain segment or neuromere. Kimmel et al, 1995.[TAO]") AnnotationAssertion( "1"^^xsd:nonNegativeInteger) AnnotationAssertion( "DHBA:12667") AnnotationAssertion( "DMBA:16915") AnnotationAssertion( "EFO:0003608") AnnotationAssertion( "EHDAA2:0001637") AnnotationAssertion( "EMAPA:16290") AnnotationAssertion( "FMA:295790") AnnotationAssertion( "TAO:0001031") AnnotationAssertion( "ZFA:0001031") AnnotationAssertion(Annotation( "ZFA:0001031") Annotation( ) "r1") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005499") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "rhombomere 1") SubClassOf( ) SubClassOf(Annotation( "definitional"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (rhombomere floor plate) AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001019") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "DOI:10.1016/S0959-4388(99)00003-3 Holland LZ and Holland ND, Chordate origins of the vertebrate central nervous system. Current Opinion in Neurobiology (1999)") "In summary, the available data for tunicates, amphioxus, and vertebrates indicate that a floorplate-like structure was already present in the proximate invertebrate ancestor of the vertebrates and that the genetic mechanisms for DV patterning of the nerve cord were also largely in place.[well established][VHOG]") AnnotationAssertion( "EHDAA2:0004324") AnnotationAssertion( "EMAPA:32818") AnnotationAssertion( "TAO:0001258") AnnotationAssertion( "VHOG:0001019") AnnotationAssertion( "ZFA:0001258") AnnotationAssertion(Annotation( "VHOG:0001019") "floor plate hindbrain") AnnotationAssertion(Annotation( "ZFA:0001258") "floor plate rhombomere region") AnnotationAssertion(Annotation( "EHDAA2:0004324") "rhombencephalon floor plate") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "ZFA:0001258") "floor plate hindbrain region") AnnotationAssertion(Annotation( "VHOG:0001019") "floor plate rhombencephalon") AnnotationAssertion(Annotation( "VHOG:0001019") "floorplate hindbrain") AnnotationAssertion( "UBERON:0005500") AnnotationAssertion(rdfs:label "rhombomere floor plate") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (rhombomere lateral wall) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A neural tube lateral wall that is part of a rhombomere.") AnnotationAssertion( "EMAPA:32819") AnnotationAssertion( "EMAPA:35364") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "EMAPA:35364") "future hindbrain lateral wall") AnnotationAssertion( "UBERON:0005501") AnnotationAssertion(rdfs:label "rhombomere lateral wall") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (rhombomere roof plate) AnnotationAssertion( "EMAPA:32824") AnnotationAssertion( "EMAPA:35367") AnnotationAssertion( "TAO:0001311") AnnotationAssertion( "VHOG:0001018") AnnotationAssertion( "ZFA:0001311") AnnotationAssertion(Annotation( "TAO:0001311") "roof plate rhombomere") AnnotationAssertion(Annotation( "ZFA:0001311") "roof plate rhombomere region") AnnotationAssertion(Annotation( "VHOG:0001018") "roof plate rhombomeres") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "EMAPA:35367") "future hindbrain roof plate") AnnotationAssertion(Annotation( "ZFA:0001311") "roof plate hindbrain") AnnotationAssertion( "UBERON:0005502") AnnotationAssertion(rdfs:label "rhombomere roof plate") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (rhombomere 3) AnnotationAssertion(Annotation( "MGI:anna"^^xsd:string) Annotation( "MGI:csmith"^^xsd:string) Annotation( "MP:0012792") Annotation( "UBERON:0005507") "The third transiently divided segment of the developing rhombencephalon; rhombomeres are lineage restricted, express different genes from one another, and adopt different developmental fates; rhombomeres are numbered in caudal to rostral order.") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0000948") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "Hindbrain segment or neuromere. Kimmel et al, 1995.[TAO]") AnnotationAssertion( "3"^^xsd:nonNegativeInteger) AnnotationAssertion( "DHBA:12669") AnnotationAssertion( "DMBA:17093") AnnotationAssertion( "EFO:0003596") AnnotationAssertion( "EHDAA2:0001657") AnnotationAssertion( "EMAPA:16297") AnnotationAssertion( "FMA:295794") AnnotationAssertion( "TAO:0000948") AnnotationAssertion( "XAO:0004081") AnnotationAssertion( "ZFA:0000948") AnnotationAssertion(Annotation( "ZFA:0000948") Annotation( ) "r3") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005507") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "rhombomere 3") SubClassOf( ) SubClassOf(Annotation( "definitional"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (rhombomere 4) AnnotationAssertion(Annotation( "MGI:anna"^^xsd:string) Annotation( "MGI:csmith"^^xsd:string) Annotation( "MP:0012796") Annotation( "UBERON:0005511") "The fourth transiently divided segment of the developing rhombencephalon; rhombomeres are lineage restricted, express different genes from one another, and adopt different developmental fates; rhombomeres are numbered in caudal to rostral order.") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0001032") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "Hindbrain segment or neuromere. Kimmel et al, 1995.[TAO]") AnnotationAssertion( "4"^^xsd:nonNegativeInteger) AnnotationAssertion( "DHBA:12671") AnnotationAssertion( "DMBA:17156") AnnotationAssertion( "EFO:0003609") AnnotationAssertion( "EHDAA2:0001667") AnnotationAssertion( "EMAPA:16301") AnnotationAssertion( "FMA:295796") AnnotationAssertion( "TAO:0001032") AnnotationAssertion( "XAO:0004082") AnnotationAssertion( "ZFA:0001032") AnnotationAssertion(Annotation( "ZFA:0001032") Annotation( ) "r4") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005511") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "rhombomere 4") SubClassOf( ) SubClassOf(Annotation( "definitional"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (rhombomere 5) AnnotationAssertion(Annotation( "MGI:anna"^^xsd:string) Annotation( "MGI:csmith"^^xsd:string) Annotation( "MP:0012800") Annotation( "UBERON:0005515") "The fifth transiently divided segment of the developing rhombencephalon; rhombomeres are lineage restricted, express different genes from one another, and adopt different developmental fates; rhombomeres are numbered in caudal to rostral order.") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0000823") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "Hindbrain segment or neuromere. Kimmel et al, 1995.[TAO]") AnnotationAssertion( "5"^^xsd:nonNegativeInteger) AnnotationAssertion( "DHBA:12673") AnnotationAssertion( "DMBA:17221") AnnotationAssertion( "EFO:0003580") AnnotationAssertion( "EHDAA2:0001677") AnnotationAssertion( "EMAPA:16305") AnnotationAssertion( "FMA:295834") AnnotationAssertion( "TAO:0000823") AnnotationAssertion( "XAO:0004083") AnnotationAssertion( "ZFA:0000823") AnnotationAssertion(Annotation( "ZFA:0000823") Annotation( ) "r5") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005515") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "rhombomere 5") SubClassOf( ) SubClassOf(Annotation( "definitional"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (rhombomere 6) AnnotationAssertion(Annotation( "MGI:anna"^^xsd:string) Annotation( "MGI:csmith"^^xsd:string) Annotation( "MP:0012804") Annotation( "UBERON:0005519") "The sixth transiently divided segment of the developing rhombencephalon; rhombomeres are lineage restricted, express different genes from one another, and adopt different developmental fates; rhombomeres are numbered in caudal to rostral order.") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0000069") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "Hindbrain segment or neuromere. Kimmel et al, 1995.[TAO]") AnnotationAssertion( "6"^^xsd:nonNegativeInteger) AnnotationAssertion( "DHBA:12674") AnnotationAssertion( "DMBA:17290") AnnotationAssertion( "EFO:0003480") AnnotationAssertion( "EHDAA2:0001687") AnnotationAssertion( "EMAPA:16500") AnnotationAssertion( "FMA:295836") AnnotationAssertion( "TAO:0000069") AnnotationAssertion( "XAO:0004084") AnnotationAssertion( "ZFA:0000069") AnnotationAssertion(Annotation( "ZFA:0000069") Annotation( ) "r6") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005519") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "rhombomere 6") SubClassOf( ) SubClassOf(Annotation( "definitional"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (rhombomere 7) AnnotationAssertion(Annotation( "MGI:anna"^^xsd:string) Annotation( "MGI:csmith"^^xsd:string) Annotation( "MP:0012808") Annotation( "UBERON:0005523") "The seventh transiently divided segment of the developing rhombencephalon; rhombomeres are lineage restricted, express different genes from one another, and adopt different developmental fates; rhombomeres are numbered in caudal to rostral order.") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0000949") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "Hindbrain segment or neuromere. Kimmel et al, 1995.[TAO]") AnnotationAssertion( "7"^^xsd:nonNegativeInteger) AnnotationAssertion( "DHBA:12675") AnnotationAssertion( "DMBA:17353") AnnotationAssertion( "EFO:0003597") AnnotationAssertion( "EHDAA2:0001697") AnnotationAssertion( "EMAPA:16504") AnnotationAssertion( "FMA:295838") AnnotationAssertion( "TAO:0000949") AnnotationAssertion( "ZFA:0000949") AnnotationAssertion(Annotation( "ZFA:0000949") Annotation( ) "r7") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005523") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "rhombomere 7") SubClassOf( ) SubClassOf(Annotation( "definitional"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (rhombomere 8) AnnotationAssertion(Annotation( "MGI:anna"^^xsd:string) Annotation( "MGI:csmith"^^xsd:string) Annotation( "MP:0012812") Annotation( "UBERON:0005527") "The eighth transiently divided segment of the developing rhombencephalon; rhombomeres are lineage restricted, express different genes from one another, and adopt different developmental fates; rhombomeres are numbered in caudal to rostral order.") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0000153") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "Hindbrain segment or neuromere. Kimmel et al, 1995.[TAO]") AnnotationAssertion( "8"^^xsd:nonNegativeInteger) AnnotationAssertion( "DHBA:12677") AnnotationAssertion( "DHBA:12868") AnnotationAssertion( "DMBA:17416") AnnotationAssertion( "EFO:0003500") AnnotationAssertion( "EHDAA2:0001707") AnnotationAssertion( "EMAPA:16508") AnnotationAssertion( "TAO:0000153") AnnotationAssertion( "ZFA:0000153") AnnotationAssertion(Annotation( "ZFA:0000153") Annotation( ) "r8") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005527") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "rhombomere 8") SubClassOf( ) SubClassOf(Annotation( "definitional"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (telencephalon lateral wall) AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000023") Annotation( "VHOG"^^xsd:string) Annotation( ) "Lateral wall that is part of the telencephalon. [Bgee_curator][VHOG]") AnnotationAssertion( "EHDAA2:0001985") AnnotationAssertion( "EHDAA:3504") AnnotationAssertion( "EMAPA:16656") AnnotationAssertion( "TAO:0000785") AnnotationAssertion( "VHOG:0000023") AnnotationAssertion( "ZFA:0000785") AnnotationAssertion(Annotation( "ZFA:0000785") "lateral wall telencephalic region") AnnotationAssertion(Annotation( "ZFA:0000785") "lateral wall telencephalon") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005561") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "telencephalon lateral wall") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (thymus primordium) AnnotationAssertion(Annotation( "ZFA:0001077") "A small outgrowth of the pharyngeal epithelium that is the site of lymphocyte cell production[ZFA]. [PMID].") AnnotationAssertion(Annotation( "ISBN:0781714125") "we follow Kardong table 13.1 in having some developmental contribution of pouch 4 in mammals, but this isn't reflected in EHDAA2. Consider adding distinct term for mesenchyme (see EHDAA2), to indicate NC constribution.") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0001077") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "A small outgrowth of the pharyngeal epithelium that is the site of lymphocyte cell production. Willett et al, 1999.[TAO]") AnnotationAssertion(Annotation( "ISBN:0781714125") "variability of developmental origin: In fish, thymic primordia are generated by all the pouches except the first. However, in avians the thymus arises from pouches 3 and 4, whereas in humans it is only generated by the third pouch[PMID:16313389] The thymus arises from the second pouch in frogs, 2-6 in cartilaginous fish, 2-3 in reptiles, 3 or 4 in bony fish, birds and mammals. The final number is variable - 5 paired organs in sharks, 4 in caecilians, 3 in urodeles, 1 in many teleost, anurans and many mammals") AnnotationAssertion( "EFO:0003622") AnnotationAssertion( "EHDAA2:0002023") AnnotationAssertion( "EHDAA:2969") AnnotationAssertion( "EMAPA:17523") AnnotationAssertion( "TAO:0001077") AnnotationAssertion( "ZFA:0001077") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "thymic primordium") AnnotationAssertion(Annotation( "ZFA:0001077") "thymic rudiment") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005562") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "thymus primordium") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "ZFA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (trigeminal neural crest) AnnotationAssertion(Annotation( "ZFA:0000080") "Cranial neural crest which gives rise to the trigeminal ganglion.") AnnotationAssertion( "todo - compare ZFA and EHDAA2 representation") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000269") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0030223693 Liem KF, Bemis WE, Walker WF, Grande L, Functional Anatomy of the Vertebrates: An Evolutionary Perspective (2001) p.43") "We conclude this section by listing some of the many synapomorphies of craniates, including (1) the neural crest (...).[well established][VHOG]") AnnotationAssertion( "EFO:0003484") AnnotationAssertion( "EHDAA2:0002083") AnnotationAssertion( "EHDAA:667") AnnotationAssertion( "EMAPA:16170") AnnotationAssertion( "TAO:0000080") AnnotationAssertion( "VHOG:0000269") AnnotationAssertion( "ZFA:0000080") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005563") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "trigeminal neural crest") SubClassOf(Annotation( "ZFA"^^xsd:string) ) SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (gonad primordium) AnnotationAssertion(Annotation( "ZFA:0001262") "Portion of tissue that gives rise to the immature gonad.") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0001262") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "Immature reproductive tissue that has not undergone final maturation into either testis or ovary.[TAO]") AnnotationAssertion( "this is a very broad grouping class") AnnotationAssertion( "EFO:0003651") AnnotationAssertion( "EHDAA:5927") AnnotationAssertion( "EMAPA:17204") AnnotationAssertion( "RETIRED_EHDAA2:0002148") AnnotationAssertion( "TAO:0001262") AnnotationAssertion( "WBbt:0008366") AnnotationAssertion( "ZFA:0001262") AnnotationAssertion(Annotation( ) "future gonad") AnnotationAssertion(Annotation( "ZFA:0001262") "gonadal primordium") AnnotationAssertion(Annotation( ) "primitive gonad") AnnotationAssertion(Annotation( "ZFA:0001262") "undifferentiated gonad") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "immature gonad") AnnotationAssertion( "UBERON:0005564") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "gonad primordium") SubClassOf(Annotation( "Obol") ) SubClassOf(Annotation( "ZFA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (facio-acoustic neural crest) AnnotationAssertion(Annotation( "ZFA:0000762") "Cranial neural crest that gives rise to the facio-acoustic ganglion.") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000268") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0030223693 Liem KF, Bemis WE, Walker WF, Grande L, Functional Anatomy of the Vertebrates: An Evolutionary Perspective (2001) p.43") "We conclude this section by listing some of the many synapomorphies of craniates, including (1) the neural crest (...).[well established][VHOG]") AnnotationAssertion( "EHDAA2:0000492") AnnotationAssertion( "EHDAA:658") AnnotationAssertion( "EMAPA:16312") AnnotationAssertion( "TAO:0000762") AnnotationAssertion( "VHOG:0000268") AnnotationAssertion( "ZFA:0000762") AnnotationAssertion(Annotation( "ZFA:0000762") "facio acoustic neural crest") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005565") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "facio-acoustic neural crest") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (rhombomere 1 floor plate) AnnotationAssertion( "DMBA:17022") AnnotationAssertion( "EFO:0003584") AnnotationAssertion( "EHDAA2:0001640") AnnotationAssertion( "EMAPA:16291") AnnotationAssertion( "TAO:0000882") AnnotationAssertion( "ZFA:0000882") AnnotationAssertion(Annotation( "ZFA:0000882") "floor plate r1") AnnotationAssertion(Annotation( "ZFA:0000882") "floor plate rhombomere 1") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005566") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "rhombomere 1 floor plate") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (rhombomere 1 lateral wall) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A rhombomere lateral wall that is part of a rhombomere 1.") AnnotationAssertion( "EHDAA2:0001641") AnnotationAssertion( "EMAPA:16482") AnnotationAssertion( "TAO:0000781") AnnotationAssertion( "ZFA:0000781") AnnotationAssertion(Annotation( "ZFA:0000781") "lateral wall rhombomere 1") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005567") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "rhombomere 1 lateral wall") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (rhombomere 1 roof plate) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A rhombomere roof plate that is part of a rhombomere 1.") AnnotationAssertion( "DMBA:16916") AnnotationAssertion( "EHDAA2:0001645") AnnotationAssertion( "EMAPA:16483") AnnotationAssertion( "TAO:0001033") AnnotationAssertion( "ZFA:0001033") AnnotationAssertion(Annotation( "ZFA:0001033") "roof plate rhombomere 1") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005568") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "rhombomere 1 roof plate") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (rhombomere 2) AnnotationAssertion(Annotation( "MGI:anna"^^xsd:string) Annotation( "MGI:csmith"^^xsd:string) Annotation( "MP:0012788") Annotation( "UBERON:0005569") "The second transiently divided segment of the developing rhombencephalon; rhombomeres are lineage restricted, express different genes from one another, and adopt different developmental fates; rhombomeres are numbered in caudal to rostral order.") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0000822") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "Hindbrain segment or neuromere. Kimmel et al, 1995.[TAO]") AnnotationAssertion( "3"^^xsd:nonNegativeInteger) AnnotationAssertion( "DHBA:12668") AnnotationAssertion( "DMBA:17023") AnnotationAssertion( "EFO:0003579") AnnotationAssertion( "EHDAA2:0001647") AnnotationAssertion( "EMAPA:16293") AnnotationAssertion( "FMA:295792") AnnotationAssertion( "TAO:0000822") AnnotationAssertion( "XAO:0004080") AnnotationAssertion( "ZFA:0000822") AnnotationAssertion(Annotation( "ZFA:0000822") Annotation( ) "r2") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005569") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "rhombomere 2") SubClassOf( ) SubClassOf(Annotation( "definitional"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (rhombomere 2 floor plate) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A rhombomere floor plate that is part of a rhombomere 2.") AnnotationAssertion( "DMBA:17091") AnnotationAssertion( "EFO:0003568") AnnotationAssertion( "EHDAA2:0001650") AnnotationAssertion( "EMAPA:16294") AnnotationAssertion( "TAO:0000763") AnnotationAssertion( "ZFA:0000763") AnnotationAssertion(Annotation( "ZFA:0000763") "floor plate r2") AnnotationAssertion(Annotation( "ZFA:0000763") "floor plate rhombomere 2") AnnotationAssertion(Annotation( "ZFA:0000763") "floorplate r2") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005570") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "rhombomere 2 floor plate") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (rhombomere 2 lateral wall) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A rhombomere lateral wall that is part of a rhombomere 2.") AnnotationAssertion( "EHDAA2:0001651") AnnotationAssertion( "EMAPA:16486") AnnotationAssertion( "TAO:0000907") AnnotationAssertion( "ZFA:0000907") AnnotationAssertion(Annotation( "ZFA:0000907") "lateral wall rhombomere 2") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005571") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "rhombomere 2 lateral wall") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (rhombomere 2 roof plate) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A rhombomere roof plate that is part of a rhombomere 2.") AnnotationAssertion( "DMBA:17024") AnnotationAssertion( "EHDAA2:0001655") AnnotationAssertion( "EMAPA:16487") AnnotationAssertion( "TAO:0000824") AnnotationAssertion( "ZFA:0000824") AnnotationAssertion(Annotation( "ZFA:0000824") "roof plate rhombomere 2") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005572") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "rhombomere 2 roof plate") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (rhombomere 3 floor plate) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A rhombomere floor plate that is part of a rhombomere 3.") AnnotationAssertion( "DMBA:17155") AnnotationAssertion( "EFO:0003586") AnnotationAssertion( "EHDAA2:0001660") AnnotationAssertion( "EMAPA:16298") AnnotationAssertion( "TAO:0000888") AnnotationAssertion( "ZFA:0000888") AnnotationAssertion(Annotation( "ZFA:0000888") "floor plate r3") AnnotationAssertion(Annotation( "ZFA:0000888") "floor plate rhombomere 3") AnnotationAssertion(Annotation( "ZFA:0000888") "floorplate r3") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005573") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "rhombomere 3 floor plate") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (rhombomere 3 lateral wall) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A rhombomere lateral wall that is part of a rhombomere 3.") AnnotationAssertion( "EHDAA2:0001661") AnnotationAssertion( "EMAPA:16490") AnnotationAssertion( "TAO:0000994") AnnotationAssertion( "ZFA:0000994") AnnotationAssertion(Annotation( "ZFA:0000994") "lateral wall rhombomere 3") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005574") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "rhombomere 3 lateral wall") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (rhombomere 3 roof plate) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A rhombomere roof plate that is part of a rhombomere 3.") AnnotationAssertion( "DMBA:17094") AnnotationAssertion( "EHDAA2:0001665") AnnotationAssertion( "EMAPA:16491") AnnotationAssertion( "TAO:0000950") AnnotationAssertion( "ZFA:0000950") AnnotationAssertion(Annotation( "ZFA:0000950") "roof plate rhombomere 3") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005575") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "rhombomere 3 roof plate") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (rhombomere 4 floor plate) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A rhombomere floor plate that is part of a rhombomere 4.") AnnotationAssertion( "DMBA:17219") AnnotationAssertion( "EFO:0003588") AnnotationAssertion( "EHDAA2:0001670") AnnotationAssertion( "EMAPA:16302") AnnotationAssertion( "TAO:0000893") AnnotationAssertion( "ZFA:0000893") AnnotationAssertion(Annotation( "ZFA:0000893") "floor plate r4") AnnotationAssertion(Annotation( "ZFA:0000893") "floor plate rhombomere 4") AnnotationAssertion(Annotation( "ZFA:0000893") "floorplate r4") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005576") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "rhombomere 4 floor plate") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (rhombomere 4 lateral wall) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A rhombomere lateral wall that is part of a rhombomere 4.") AnnotationAssertion( "EHDAA2:0001671") AnnotationAssertion( "EMAPA:16494") AnnotationAssertion( "TAO:0000782") AnnotationAssertion( "ZFA:0000782") AnnotationAssertion(Annotation( "ZFA:0000782") "lateral wall rhombomere 4") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005577") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "rhombomere 4 lateral wall") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (rhombomere 4 roof plate) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A rhombomere roof plate that is part of a rhombomere 4.") AnnotationAssertion( "DMBA:17157") AnnotationAssertion( "EHDAA2:0001675") AnnotationAssertion( "EMAPA:16495") AnnotationAssertion( "TAO:0001034") AnnotationAssertion( "ZFA:0001034") AnnotationAssertion(Annotation( "ZFA:0001034") "roof plate rhombomere 4") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005578") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "rhombomere 4 roof plate") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (rhombomere 5 floor plate) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A rhombomere floor plate that is part of a rhombomere 5.") AnnotationAssertion( "DMBA:17289") AnnotationAssertion( "EFO:0003569") AnnotationAssertion( "EHDAA2:0001680") AnnotationAssertion( "EMAPA:16306") AnnotationAssertion( "TAO:0000764") AnnotationAssertion( "ZFA:0000764") AnnotationAssertion(Annotation( "ZFA:0000764") "floor plate r5") AnnotationAssertion(Annotation( "ZFA:0000764") "floor plate rhombomere 5") AnnotationAssertion(Annotation( "ZFA:0000764") "floorplate r5") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005579") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "rhombomere 5 floor plate") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (rhombomere 5 lateral wall) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A rhombomere lateral wall that is part of a rhombomere 5.") AnnotationAssertion( "EHDAA2:0001681") AnnotationAssertion( "EMAPA:16498") AnnotationAssertion( "TAO:0000908") AnnotationAssertion( "ZFA:0000908") AnnotationAssertion(Annotation( "ZFA:0000908") "lateral wall rhombomere 5") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005580") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "rhombomere 5 lateral wall") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (rhombomere 5 roof plate) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A rhombomere roof plate that is part of a rhombomere 5.") AnnotationAssertion( "DMBA:17222") AnnotationAssertion( "EHDAA2:0001685") AnnotationAssertion( "EMAPA:16499") AnnotationAssertion( "TAO:0000828") AnnotationAssertion( "ZFA:0000828") AnnotationAssertion(Annotation( "ZFA:0000828") "roof plate rhombomere 5") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005581") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "rhombomere 5 roof plate") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (rhombomere 6 floor plate) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A rhombomere floor plate that is part of a rhombomere 6.") AnnotationAssertion( "DMBA:17351") AnnotationAssertion( "EFO:0003587") AnnotationAssertion( "EHDAA2:0001690") AnnotationAssertion( "EMAPA:16501") AnnotationAssertion( "TAO:0000889") AnnotationAssertion( "ZFA:0000889") AnnotationAssertion(Annotation( "ZFA:0000889") "floor plate r6") AnnotationAssertion(Annotation( "ZFA:0000889") "floor plate rhombomere 6") AnnotationAssertion(Annotation( "ZFA:0000889") "floorplate r6") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005582") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "rhombomere 6 floor plate") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (rhombomere 6 lateral wall) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A rhombomere lateral wall that is part of a rhombomere 6.") AnnotationAssertion( "EHDAA2:0001691") AnnotationAssertion( "EMAPA:16502") AnnotationAssertion( "TAO:0000995") AnnotationAssertion( "ZFA:0000995") AnnotationAssertion(Annotation( "ZFA:0000995") "lateral wall rhombomere 6") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005583") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "rhombomere 6 lateral wall") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (rhombomere 6 roof plate) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A rhombomere roof plate that is part of a rhombomere 6.") AnnotationAssertion( "DMBA:17291") AnnotationAssertion( "EHDAA2:0001695") AnnotationAssertion( "EMAPA:16503") AnnotationAssertion( "TAO:0000825") AnnotationAssertion( "ZFA:0000825") AnnotationAssertion(Annotation( "ZFA:0000825") "roof plate rhombomere 6") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005584") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "rhombomere 6 roof plate") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (rhombomere 7 floor plate) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A rhombomere floor plate that is part of a rhombomere 7.") AnnotationAssertion( "DMBA:17415") AnnotationAssertion( "EFO:0003589") AnnotationAssertion( "EHDAA2:0001700") AnnotationAssertion( "EMAPA:16505") AnnotationAssertion( "TAO:0000904") AnnotationAssertion( "ZFA:0000904") AnnotationAssertion(Annotation( "ZFA:0000904") "floor plate r7") AnnotationAssertion(Annotation( "ZFA:0000904") "floor plate rhombomere 7") AnnotationAssertion(Annotation( "ZFA:0000904") "floorplate r7") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005585") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "rhombomere 7 floor plate") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (rhombomere 7 lateral wall) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A rhombomere lateral wall that is part of a rhombomere 7.") AnnotationAssertion( "EHDAA2:0001701") AnnotationAssertion( "EMAPA:16506") AnnotationAssertion( "TAO:0000783") AnnotationAssertion( "ZFA:0000783") AnnotationAssertion(Annotation( "ZFA:0000783") "lateral wall rhombomere 7") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005586") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "rhombomere 7 lateral wall") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (rhombomere 7 roof plate) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A rhombomere roof plate that is part of a rhombomere 7.") AnnotationAssertion( "DMBA:17354") AnnotationAssertion( "EHDAA2:0001705") AnnotationAssertion( "EMAPA:16507") AnnotationAssertion( "TAO:0000951") AnnotationAssertion( "ZFA:0000951") AnnotationAssertion(Annotation( "ZFA:0000951") "roof plate rhombomere 7") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005587") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "rhombomere 7 roof plate") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (rhombomere 8 floor plate) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A rhombomere floor plate that is part of a rhombomere 8.") AnnotationAssertion( "DMBA:17475") AnnotationAssertion( "EFO:0003570") AnnotationAssertion( "EHDAA2:0001709") AnnotationAssertion( "EMAPA:16509") AnnotationAssertion( "TAO:0000765") AnnotationAssertion( "ZFA:0000765") AnnotationAssertion(Annotation( "ZFA:0000765") "floor plate r8") AnnotationAssertion(Annotation( "ZFA:0000765") "floor plate rhombomere 8") AnnotationAssertion(Annotation( "ZFA:0000765") "floorplate r8") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005588") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "rhombomere 8 floor plate") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (rhombomere 8 lateral wall) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A rhombomere lateral wall that is part of a rhombomere 8.") AnnotationAssertion( "EHDAA2:0001710") AnnotationAssertion( "EMAPA:16510") AnnotationAssertion( "TAO:0000909") AnnotationAssertion( "ZFA:0000909") AnnotationAssertion(Annotation( "ZFA:0000909") "lateral wall rhombomere 8") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005589") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "rhombomere 8 lateral wall") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (rhombomere 8 roof plate) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A rhombomere roof plate that is part of a rhombomere 8.") AnnotationAssertion( "DMBA:17417") AnnotationAssertion( "EHDAA2:0001714") AnnotationAssertion( "EMAPA:16511") AnnotationAssertion( "TAO:0001035") AnnotationAssertion( "ZFA:0001035") AnnotationAssertion(Annotation( "ZFA:0001035") "roof plate rhombomere 8") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005590") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "rhombomere 8 roof plate") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (diencephalon lateral wall) AnnotationAssertion( "EHDAA2:0000396") AnnotationAssertion( "EHDAA:1977") AnnotationAssertion( "EMAPA:16905") AnnotationAssertion( "TAO:0000780") AnnotationAssertion( "VHOG:0000596") AnnotationAssertion( "ZFA:0000780") AnnotationAssertion(Annotation( "ZFA:0000780") "lateral wall diencephalic region") AnnotationAssertion(Annotation( "ZFA:0000780") "lateral wall diencephalon") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005591") AnnotationAssertion(rdfs:label "diencephalon lateral wall") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (head somite) AnnotationAssertion(Annotation( ) "Somite located in the head region, caudal to the otic vesicle.") AnnotationAssertion( "in humans this includes somites 1-4") AnnotationAssertion(Annotation( ) "They provide the epaxial and hypaxial muscles of the neck, the pharyngeal and laryngeal muscles that develop in the caudal branchial arches and the musculature of the tongue. Despite their localisation in the head, myogenic precursors from occipital somites essentially follow the trunk programmes (E. H. Walters and S. D., unpublished). during evolution, have been secondarily incorporated into the head (Gans and Northcutt, 1983)") AnnotationAssertion(Annotation( "EHDAA2"^^xsd:string) "EHDAA2 has both 'head somite' and 'head somite group', with part_of and develops_from for latter") AnnotationAssertion( "EHDAA2:0003437") AnnotationAssertion( "EMAPA:16172") AnnotationAssertion( "XAO:0000313") AnnotationAssertion(Annotation( ) Annotation( "XAO:0000313") "occipital somite") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "XAO:0000313") "cranial somite") AnnotationAssertion( "UBERON:0005594") AnnotationAssertion(rdfs:label "head somite") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (lung primordium) AnnotationAssertion(Annotation( "XAO:0001002") "A pair of lateral diverticula just over the liver rudiment representing the primordia of the lungs, formed by the floor of the foregut just anterior to the liver diverticulum.") AnnotationAssertion( "AAO:0011059") AnnotationAssertion( "EFO:0002578") AnnotationAssertion( "EMAPA:36007") AnnotationAssertion( "XAO:0001002") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "XAO:0001002") "lateral diverticula") AnnotationAssertion(Annotation( "AAO:3010717") "lung diverticulum") AnnotationAssertion(Annotation( "EFO:0002578") "lung endoderm") AnnotationAssertion( "UBERON:0005597") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "lung primordium") SubClassOf(Annotation( "XAO"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "XAO"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (trunk somite) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A somite that is part of a trunk.") AnnotationAssertion( "AAO:0010385") AnnotationAssertion( "EHDAA2:0003438") AnnotationAssertion( "EMAPA:16184") AnnotationAssertion( "XAO:0000314") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005598") AnnotationAssertion(rdfs:label "trunk somite") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (common dorsal aorta) AnnotationAssertion( "EHDAA2:0000307") AnnotationAssertion( "EHDAA:1251") AnnotationAssertion( "EMAPA:16327") AnnotationAssertion( "MA:0000477") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005599") AnnotationAssertion(rdfs:label "common dorsal aorta") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (crus commune) AnnotationAssertion(Annotation( ) "A region formed by non-ampulated ends of posterior and superior semicircular canals of vestibular apparatus in inner ear.") AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0000330") AnnotationAssertion( "EHDAA:7783") AnnotationAssertion( "EMAPA:17818") AnnotationAssertion( "MA:0001210") AnnotationAssertion( "VHOG:0001344") AnnotationAssertion( "crus commune canalis semicircularis") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "MA:0001210") "crus commune") AnnotationAssertion( "UBERON:0005600") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "crus commune") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (dorsal mesocardium) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "The part of the mesocardium dorsal to the embryonic heart; it breaks down to form the transverse sinus of the pericardium.") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000432") Annotation( "VHOG"^^xsd:string) Annotation( ) "The mesentery of the embryonic heart. [Dorian_AF, Elsevier's_encyclopaedic_dictionary_of_medicine, Part_B:_Anatomy_(1988)_Amsterdam_etc.:_Elsevier][VHOG]") AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0000413") AnnotationAssertion( "EHDAA:434") AnnotationAssertion( "EMAPA:16213") AnnotationAssertion( "MA:0000482") AnnotationAssertion( "VHOG:0000432") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "EMAPA:16213") "dorsal heart mesentery") AnnotationAssertion(Annotation( "EMAPA:16213") "dorsal mesentery of heart") AnnotationAssertion( "UBERON:0005601") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "dorsal mesocardium") SubClassOf(Annotation( "MA"^^xsd:string) ) # Class: (dorsal mesogastrium) AnnotationAssertion(Annotation( ) "The portion of mesentery attached to the greater curvature of the stomach is named the dorsal mesentery (or dorsal mesogastrium, when referring to the portion at the stomach), and the part which suspends the colon is termed the mesocolon. The dorsal mesogastrium develops into the greater omentum.") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000352") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( ) "The dorsal sheet of the primitive mesentery that encloses the stomach. The greater omentum develops from the dorsal mesogastrium. [TFD][VHOG]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0000416") AnnotationAssertion( "EHDAA:3001") AnnotationAssertion( "EMAPA:17025") AnnotationAssertion( "MA:0001618") AnnotationAssertion( "NCIT:C34142") AnnotationAssertion(Annotation( "ncithesaurus:Dorsal_Mesogastrium") "UMLS:C1512038") AnnotationAssertion( "VHOG:0000352") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "dorsal mesentery") AnnotationAssertion( "UBERON:0005602") AnnotationAssertion(rdfs:label "dorsal mesogastrium") SubClassOf(Annotation( "MA"^^xsd:string) ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (extrahepatic part of hepatic duct) AnnotationAssertion( "EMAPA:16844") AnnotationAssertion( "MA:0001636") AnnotationAssertion( "VHOG:0000215") AnnotationAssertion(Annotation( "VHOG:0000215") "extrahepatic part of the hepatic duct") AnnotationAssertion(Annotation( "MA:0001636") "hepatic duct extrahepatic part") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005604") AnnotationAssertion(rdfs:label "extrahepatic part of hepatic duct") SubClassOf( ) SubClassOf(Annotation( "MA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "MA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (intrahepatic part of hepatic duct) AnnotationAssertion( "EMAPA:16845") AnnotationAssertion( "MA:0001637") AnnotationAssertion( "VHOG:0000216") AnnotationAssertion(Annotation( "MA:0001637") "hepatic duct intrahepatic part") AnnotationAssertion(Annotation( "VHOG:0000216") "intrahepatic part of the hepatic duct") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005605") AnnotationAssertion(rdfs:label "intrahepatic part of hepatic duct") SubClassOf( ) SubClassOf(Annotation( "MA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "MA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (hyaloid cavity) AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001477") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( ) "A depression in the front of the vitreous body, lodging the lens. [adapted_from_the_definition_of_the_hyaloid_fossa]") AnnotationAssertion( "EHDAA2:0000789") AnnotationAssertion( "EHDAA:4733") AnnotationAssertion( "EMAPA:17302") AnnotationAssertion( "FMA:312291") AnnotationAssertion( "MA:0000272") AnnotationAssertion( "VHOG:0001477") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005606") AnnotationAssertion(rdfs:label "hyaloid cavity") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (hyaloid vascular plexus) AnnotationAssertion( "EHDAA2:0000790") AnnotationAssertion( "EHDAA:5703") AnnotationAssertion( "EMAPA:17303") AnnotationAssertion( "FMA:312298") AnnotationAssertion( "MA:0001283") AnnotationAssertion( "VHOG:0000442") AnnotationAssertion( "XAO:0004157") AnnotationAssertion( "uberon") AnnotationAssertion( "hyaloid vascular system") AnnotationAssertion( "UBERON:0005607") AnnotationAssertion(rdfs:label "hyaloid vascular plexus") SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (hyoid artery) AnnotationAssertion(Annotation( ) "The second arch becomes the hyoid artery, which is prominent in early development and normally persists as the caroticotympanic branch of the ICA[Padget].") AnnotationAssertion( "EHDAA:3342") AnnotationAssertion( "EMAPA:17308") AnnotationAssertion( "FMA:49474") AnnotationAssertion( "MA:0001969") AnnotationAssertion( "RETIRED_EHDAA2:0000792") AnnotationAssertion( "VHOG:0001409") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005608") AnnotationAssertion(rdfs:label "hyoid artery") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (iliac artery) AnnotationAssertion(Annotation( ) Annotation( ) "Any of the arteries that arise from a bifurcation of the aorta supplying the pelvic or abdomen. Examples: Common iliac artery, External iliac artery, Internal iliac artery.") AnnotationAssertion( "this is an extremely loose and flexible grouping class that is the superclass of the mammalian common iliac and its main brahces, together with analagous structures in other tetrapods") AnnotationAssertion(Annotation( "XAO"^^xsd:string) "we place the XAO structure here for now. In terms of analagy, it is more closely related to common iliac, but the relationships currently attached to this class are mammal specific") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0004665") AnnotationAssertion( "EHDAA:2551") AnnotationAssertion( "EMAPA:17309") AnnotationAssertion( "MA:0001971") AnnotationAssertion( "MESH:D007083") AnnotationAssertion( "NCIT:C12733") AnnotationAssertion( "RETIRED_EHDAA2:0000807") AnnotationAssertion(Annotation( "ncithesaurus:Iliac_Artery") "UMLS:C0020887") AnnotationAssertion( "XAO:0000361") AnnotationAssertion( "galen:IliacArtery") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005609") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "iliac artery") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses( ) # Class: (iliac vein) AnnotationAssertion(Annotation( "ncithesaurus:Iliac_Vein") "Any of the three veins including the common, external and internal iliac veins.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0000811") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37151") AnnotationAssertion( "MA:0002142") AnnotationAssertion( "MESH:D007084") AnnotationAssertion( "NCIT:C12734") AnnotationAssertion(Annotation( "ncithesaurus:Iliac_Vein") "UMLS:C0020888") AnnotationAssertion( "uberon") AnnotationAssertion( "pelvic vein") AnnotationAssertion( "UBERON:0005610") AnnotationAssertion(rdfs:label "iliac vein") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (inner canthus) AnnotationAssertion(Annotation( ) "A corner of the medial (inner) part of an eye.") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000829") Annotation( "VHOG"^^xsd:string) Annotation( ) "The angle at the end of the palpebral fissure, the slit between the eyelids, close to the nose. [ISBN:0124020607, p.263][VHOG]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0000829") AnnotationAssertion( "EMAPA:17830") AnnotationAssertion( "FMA:59316") AnnotationAssertion( "MA:0001262") AnnotationAssertion( "NCIT:C49564") AnnotationAssertion(Annotation( "ncithesaurus:Inner_Canthus") "UMLS:C1708516") AnnotationAssertion( "VHOG:0000829") AnnotationAssertion(Annotation( "FMA:59316") "medial palpebral commissure") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "inner canthi") AnnotationAssertion(Annotation( "MA:0001262") "medial canthus") AnnotationAssertion( "medial canthus of eye") AnnotationAssertion( "nasal canthus") AnnotationAssertion( "UBERON:0005611") AnnotationAssertion(rdfs:label "inner canthus") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses(Annotation( "lexical"^^xsd:string) ) # Class: (intercostal artery) AnnotationAssertion(Annotation( ) "One of a group of arteries that supply the area between the ribs ('costae'), called the intercostal space.") AnnotationAssertion( "TODO - add children. Mouse has dorsal, ventral and upper; humans have anterior, posterior; teleost has segmental") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0000840") AnnotationAssertion( "EHDAA:5307") AnnotationAssertion( "EMAPA:18753") AnnotationAssertion( "MA:0001981") AnnotationAssertion( "NCIT:C32821") AnnotationAssertion(Annotation( "ncithesaurus:Intercostal_Artery") "UMLS:C0459917") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005612") AnnotationAssertion(rdfs:label "intercostal artery") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (left dorsal aorta) AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000484") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0174480198 Roberts MBV, Biology: a functional approach (1986) p.572") "A study of embryos shows that in all vertebrates six arterial arches link the ventral aorta with a pair of lateral dorsal aortae on each side of the body. The latter unite posteriorly to form a single median dorsal aorta wich takes blood to the body.[well established][VHOG]") AnnotationAssertion(Annotation( ) "Contributes to the arch of aorta in humans") AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0000936") AnnotationAssertion( "EHDAA:404") AnnotationAssertion( "EMAPA:16205") AnnotationAssertion( "MA:0000478") AnnotationAssertion( "VHOG:0000484") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005613") AnnotationAssertion(rdfs:label "left dorsal aorta") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lens anterior epithelium) AnnotationAssertion(Annotation( ) "A layer of cuboidal epithelial cells bounded anteriorly by the capsule of the lens and posteriorly by the lens cortex.") AnnotationAssertion( "Cells of the subcapsular epithelium (or anterior lens cells) are mitotically active. In adult individuals they only cover the anterior 'hemisphere' of the lens. As they divide, cells gradually move towards the equator of the lens where they tranform into lens fibres. The apical part of the gradually elongating cell extends between the subcapsular epithelium and adjacent lens fibres towards the anterior pole of the lens. The basal part extends towards the posterior pole. The nucleus remains close to the equatorial plane of the lens - http://www.lab.anhb.uwa.edu.au/mb140/corepages/eye/eye.htm") AnnotationAssertion( "lens epithelium") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0000984") AnnotationAssertion( "EHDAA:9059") AnnotationAssertion( "EMAPA:17304") AnnotationAssertion( "EMAPA:17839") AnnotationAssertion( "FMA:70612") AnnotationAssertion( "MA:0001302") AnnotationAssertion( "NCIT:C33641") AnnotationAssertion( "RETIRED_EHDAA2:0000976") AnnotationAssertion(Annotation( "ncithesaurus:Subcapsular_Epithelium_of_the_Lens") "UMLS:C1182652") AnnotationAssertion( "VHOG:0001425") AnnotationAssertion(Annotation( ) "lens subcapsular epithelium") AnnotationAssertion(Annotation( "FMA:70612") "subcapsular lens epithelium") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "EMAPA:17304") "anterior epithelium of lens vesicle") AnnotationAssertion(Annotation( "FMA:58889") "anterior surface of lens") AnnotationAssertion( "UBERON:0005614") AnnotationAssertion(rdfs:label "lens anterior epithelium") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lens equatorial epithelium) AnnotationAssertion( "EHDAA:9063") AnnotationAssertion( "EMAPA:17840") AnnotationAssertion( "MA:0001303") AnnotationAssertion( "RETIRED_EHDAA2:0000978") AnnotationAssertion( "VHOG:0001459") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005615") AnnotationAssertion(rdfs:label "lens equatorial epithelium") SubClassOf( ) # Class: (mesenteric artery) AnnotationAssertion(Annotation( ) Annotation( "MESH:A07.231.114.565") "Arteries which arise from the abdominal aorta and distribute to most of the intestines.") AnnotationAssertion( "includes posterior and anterior mesenteric arteries, which branch from the dorsal aorta (see Kardong), and superior and inferior mesenteric arteries") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0000779") AnnotationAssertion( "EHDAA2:0001123") AnnotationAssertion( "EHDAA:4343") AnnotationAssertion( "EMAPA:17312") AnnotationAssertion( "MA:0002003") AnnotationAssertion( "MESH:D008638") AnnotationAssertion( "NCIT:C52975") AnnotationAssertion(Annotation( "ncithesaurus:Mesenteric_Artery") "UMLS:C0025465") AnnotationAssertion( "VHOG:0001117") AnnotationAssertion( "XAO:0000370") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005616") AnnotationAssertion(rdfs:label "mesenteric artery") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (mesenteric vein) AnnotationAssertion(Annotation( ) Annotation( "MESH:A07.231.908.670.385") "A vein that returns blood from the intestines.") AnnotationAssertion( "In humans the inferior mesenteric vein empties into the splenic vein, the superior mesenteric vein joins the splenic vein to form the portal vein") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0002781") AnnotationAssertion( "EHDAA:4442") AnnotationAssertion( "EMAPA:17348") AnnotationAssertion( "MA:0002177") AnnotationAssertion( "MESH:D008642") AnnotationAssertion( "NCIT:C53055") AnnotationAssertion( "RETIRED_EHDAA2:0001125") AnnotationAssertion(Annotation( "ncithesaurus:Mesenteric_Vein") "UMLS:C0025473") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "intestinal vein") AnnotationAssertion( "UBERON:0005617") AnnotationAssertion(rdfs:label "mesenteric vein") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (secondary palatal shelf) AnnotationAssertion(Annotation( ) Annotation( ) "The outgrowths of the embryonic maxillary prominences that come together during prenatal development to form the secondary palate.") AnnotationAssertion( "consider splitting into embryonic/fully formed") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000378") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( ) "The outgrowths of the embryonic maxillae that come together during prenatal development to form the secondary palate. [TFD][VHOG]") AnnotationAssertion( "EHDAA2:0001364") AnnotationAssertion( "EHDAA:9283") AnnotationAssertion( "EMAPA:17362") AnnotationAssertion( "FMA:295948") AnnotationAssertion( "MA:0001581") AnnotationAssertion( "VHOG:0000378") AnnotationAssertion(Annotation( ) "lateral palatine process") AnnotationAssertion(Annotation( "MA:0001581") "palatal shelf") AnnotationAssertion( "secondary palatal shelf") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "palatal shelves") AnnotationAssertion(Annotation( "VHOG:0000378") "palatine shelf") AnnotationAssertion( "UBERON:0005619") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "secondary palatal shelf") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "cjm"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (primary palate) AnnotationAssertion(Annotation( ) Annotation( ) "The part of the palate formed from the intermaxillary segment.") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000362") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( ) "The shelf separating the oral and nasal cavities that is formed during early embryonic development from protrusions of tissue between the olfactory pits. [TFD][VHOG]") AnnotationAssertion(Annotation( "2012-11-28") Annotation( "VHOG:0000362") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0072528305 Kardong") "Early tetrapod possessed a primary palate that included the vomer, pterygoid, parasphenoid, palatine and ectopterygoid bones. Therapsid evolved a partial secondary palate formed by the medial extension of the premaxilla and maxilla. Mammals have a secondary palate that, in addition to extensions of the premaxilla and maxilla, includes part of the palatine bone[VHOG]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0001496") AnnotationAssertion( "EHDAA2:0001499") AnnotationAssertion( "EMAPA:17642") AnnotationAssertion( "FMA:295874") AnnotationAssertion( "MA:0001583") AnnotationAssertion( "NCIT:C34264") AnnotationAssertion(Annotation( "ncithesaurus:Primary_Palate") "UMLS:C1268540") AnnotationAssertion( "VHOG:0000362") AnnotationAssertion(Annotation( "EHDAA2:0001499") "primary palate process") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "palatum primarium") AnnotationAssertion(Annotation( ) "primary palate") AnnotationAssertion(Annotation( "VHOG:0000362") "primitive palate") AnnotationAssertion(Annotation( ) Annotation( ) "processus palatinus medianus") AnnotationAssertion( "UBERON:0005620") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "primary palate") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "consider reversing") Annotation( "VHOG"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2-abduced") ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (rhomboid) AnnotationAssertion(Annotation( ) "A rhombus-shaped muscle associated with the scapula and chiefly responsible for its retraction. There are two rhomboid muscles.") AnnotationAssertion( "TODO - add child terms") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0001635") AnnotationAssertion( "EHDAA:8315") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37733") AnnotationAssertion( "MA:0002367") AnnotationAssertion( "VHOG:0001391") AnnotationAssertion( "rhomboid muscle") AnnotationAssertion( "uberon") AnnotationAssertion( "muscle of rhomboideus complex") AnnotationAssertion(Annotation( ) Annotation( ) "musculus rhomboideus") AnnotationAssertion(Annotation( "VHOG:0001391") "rhomboideus") AnnotationAssertion( "rhomboideus muscle") AnnotationAssertion( "UBERON:0005621") AnnotationAssertion(rdfs:label "rhomboid") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/a/aa/Rhomboidei.PNG"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "nuchal ligaments spinous processes of the C7 to T5 vertebrae") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "nuchal ligaments spinous processes of the C7 to T5 vertebrae") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (right dorsal aorta) AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000485") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0174480198 Roberts MBV, Biology: a functional approach (1986) p.572") "A study of embryos shows that in all vertebrates six arterial arches link the ventral aorta with a pair of lateral dorsal aortae on each side of the body. The latter unite posteriorly to form a single median dorsal aorta wich takes blood to the body.[well established][VHOG]") AnnotationAssertion(Annotation( ) "Normally regresses in humans") AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0001720") AnnotationAssertion( "EHDAA:406") AnnotationAssertion( "EMAPA:16206") AnnotationAssertion( "MA:0000479") AnnotationAssertion( "VHOG:0000485") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005622") AnnotationAssertion(rdfs:label "right dorsal aorta") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (semi-lunar valve) AnnotationAssertion(Annotation( "MGI:pvb") Annotation( "MP:0002746") "The valves that gate the flow of blood from the ventricles into the aorta and pulmonary trunk.") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001393") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "DOI:10.1161/CIRCRESAHA.109.201566 Combs MD, Yutzey KE, Heart valve development. Circulatory Research (2009)") "Extensive conservation of valve developmental mechanisms also has been observed among vertebrate species including chicken, mouse, and human.[well established][VHOG]") AnnotationAssertion( "Lacks chordae tendinae") AnnotationAssertion( "EHDAA2:0001823") AnnotationAssertion( "EHDAA:4408") AnnotationAssertion( "EMAPA:35760") AnnotationAssertion( "MA:0002790") AnnotationAssertion( "VHOG:0001393") AnnotationAssertion(Annotation( "MA:0002790") "semilunar valve") AnnotationAssertion(Annotation( "MA:0002790") Annotation( ) "semilunar valves") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005623") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "semi-lunar valve") SubClassOf( ) # Class: (suprarenal artery) AnnotationAssertion(Annotation( ) "Artery that supplies blood to the adrenal glands.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0001965") AnnotationAssertion( "EHDAA:8596") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37124") AnnotationAssertion( "MA:0001914") AnnotationAssertion( "NCIT:C33708") AnnotationAssertion( "ncithesaurus:Adrenal_Artery") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( "MA:0001914") "adrenal artery") AnnotationAssertion( "UBERON:0005624") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "suprarenal artery") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (tubotympanic recess lumen) AnnotationAssertion(Annotation( ) "The cavity formed by the tubotympanic recess epithelium.") AnnotationAssertion( "EHDAA2:0002095") AnnotationAssertion( "FMA:312393") AnnotationAssertion( "cavity of tubotympanic recess") AnnotationAssertion( "tubotympanic recess cavity") AnnotationAssertion( "tubotympanic recess space") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "EHDAA2:0002095") "tubotympanic recess") AnnotationAssertion( "UBERON:0005625") AnnotationAssertion(rdfs:label "tubotympanic recess lumen") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "ISBN:0073040584"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (ventral mesogastrium) AnnotationAssertion(Annotation( ) "Portion of ventral mesentery closest to the stomach.") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0005133") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "The mesentery that originates from the ventral side of the peritoneal cavity.[TAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000351") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( ) "The ventral sheet of the primitive mesentery that encloses the stomach. The lesser omentum develops from the ventral mesogastrium. [TFD][VHOG]") AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0002176") AnnotationAssertion( "EHDAA:3005") AnnotationAssertion( "EMAPA:17026") AnnotationAssertion( "MA:0001621") AnnotationAssertion( "NCIT:C34327") AnnotationAssertion( "TAO:0005133") AnnotationAssertion(Annotation( "ncithesaurus:Ventral_Mesogastrium") "UMLS:C1519967") AnnotationAssertion( "VHOG:0000351") AnnotationAssertion( "ZFA:0005133") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "foregut ventral mesentery") AnnotationAssertion( "UBERON:0005626") AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "\"The primitive gut is enveloped by a mesentery that has a dorsal and a ventral aspect. The ventral mesentery degenerates during development with the exception of the foregut ventral mesentery, which develops into specialized structures (see foregut embryology).\" [http://sprojects.mmi.mcgill.ca/embryology/gi/pgm.htm]. todo - check") AnnotationAssertion(rdfs:label "ventral mesogastrium") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/c/cf/Gray984.png"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (ileal artery) AnnotationAssertion(Annotation( ) "The ileal arteries feed oxygenated blood into the ileum, a portion of the small intestine in mammals, reptiles, and birds. They are branches of the superior mesenteric artery.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:14809") AnnotationAssertion( "galen:IlealArteries") AnnotationAssertion(Annotation( "FMA:14809") "ileal branch of superior mesenteric artery") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "arteriae ileales") AnnotationAssertion( "UBERON:0005628") AnnotationAssertion(rdfs:label "ileal artery") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/8/86/Gray535.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (vascular plexus) AnnotationAssertion(Annotation( ) "A vascular network formed by frequent anastomoses between the blood vessels (arteries or veins) of a part.") AnnotationAssertion(Annotation( ) "In a vascular plexus, the contents of the vessels mix. A plexus allows blood to flow via multiple routes. If one branch of the plexus is obstructed, the blood may flow via the open branches[Wikipedia:Plexus#Circulatory_system].") AnnotationAssertion( "AEO:0000219") AnnotationAssertion( "EHDAA2:0004112") AnnotationAssertion( "EMAPA:35904") AnnotationAssertion( "FMA:5900") AnnotationAssertion( "XAO:0004143") AnnotationAssertion(Annotation( ) "plexus vasculosus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005629") AnnotationAssertion(rdfs:label "vascular plexus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (fetal membrane) AnnotationAssertion(Annotation( ) "The amnion and chorion which surround and protect a developing fetus.") AnnotationAssertion( "TODO - merge with extraembryonic membrane?") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0000473") AnnotationAssertion( "MESH:A16.254.403") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "adnexa fetalia") AnnotationAssertion( "UBERON:0005630") AnnotationAssertion(rdfs:label "fetal membrane") SubClassOf( ) # Class: (extraembryonic membrane) AnnotationAssertion(Annotation( "ISBN:0073040584"^^xsd:string) "Intrinsic membrane that arises from embryonic germ layers and grow to surround the developing embryo.") AnnotationAssertion( "stuctures homologous to the four extraembryonic membranes appear in mammals [ISBN:0073040584 (Vertebrates, Kardong)]") AnnotationAssertion(Annotation( "EHDAA2"^^xsd:string) "EHDAA2 is a mereological sum.") AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0004714") AnnotationAssertion( "FMA:305915") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005631") AnnotationAssertion(rdfs:label "extraembryonic membrane") AnnotationAssertion(rdfs:seeAlso "https://github.com/obophenotype/uberon/wiki/Modeling-extraembryonic-membranes"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (caecum epithelium) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An epithelium that is part of a caecum.") AnnotationAssertion( "EHDAA2:0000209") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005636") AnnotationAssertion(rdfs:label "caecum epithelium") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pyloric region epithelium) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An epithelium that is part of a pylorus.") AnnotationAssertion( "EHDAA2:0001582") AnnotationAssertion( "EMAPA:17633") AnnotationAssertion( "RETIRED_EHDAA2:0001927") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005637") AnnotationAssertion(rdfs:label "pyloric region epithelium") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (anterior chamber epithelium) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An epithelium that is part of a anterior chamber of eyeball.") AnnotationAssertion( "EHDAA2:0000130") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005638") AnnotationAssertion(rdfs:label "anterior chamber epithelium") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (right lung cranial lobe epithelium) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An epithelium that is part of a upper lobe of right lung.") AnnotationAssertion( "EHDAA2:0001751") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005639") AnnotationAssertion(rdfs:label "right lung cranial lobe epithelium") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (right lung caudal lobe epithelium) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An epithelium that is part of a lower lobe of right lung.") AnnotationAssertion( "EHDAA2:0001743") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005640") AnnotationAssertion(rdfs:label "right lung caudal lobe epithelium") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete otocyst epithelium) AnnotationAssertion( "Curated as it is indistinguishable from parent; See https://github.com/obophenotype/uberon/issues/1305") AnnotationAssertion( "EHDAA2:0001344") AnnotationAssertion( "EMAPA:16671") AnnotationAssertion( "EMAPA:16996") AnnotationAssertion( "EMAPA:16999") AnnotationAssertion( "UBERON:0003051") AnnotationAssertion( "VHOG:0000986") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005641") AnnotationAssertion(rdfs:label "obsolete otocyst epithelium") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (ultimobranchial body epithelium) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An epithelium that is part of a ultimobranchial body.") AnnotationAssertion(Annotation( "EHDAA2"^^xsd:string) "in EHDAA2, develops_from ventral 4th arch branchial pouch endoderm. Kardong: develops from 5th pouch. PMID:16313389: the most posterior pouch generates the ultimobranchial bodies in most vertebrate classes, mammals do not form this structure.") AnnotationAssertion( "EHDAA2:0002105") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005642") AnnotationAssertion(rdfs:label "ultimobranchial body epithelium") SubClassOf(Annotation( "EHDAA2"^^xsd:string) ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (foregut duodenum epithelium) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An epithelium that is part of a duodenum of foregut.") AnnotationAssertion( "EHDAA2:0000563") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005643") AnnotationAssertion(rdfs:label "foregut duodenum epithelium") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (midgut duodenum epithelium) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An epithelium that is part of a duodenum of midgut.") AnnotationAssertion( "EHDAA2:0001192") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005644") AnnotationAssertion(rdfs:label "midgut duodenum epithelium") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (manual digit 2 epithelium) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An epithelium that is part of a manual digit 2.") AnnotationAssertion( "EHDAA2:0000518") AnnotationAssertion( "EMAPA:17433") AnnotationAssertion(Annotation( "OBOL:accepted"^^xsd:string) "fore limb digit 2 epithelium") AnnotationAssertion(Annotation( ) Annotation( ) "manual digit II epithelium") AnnotationAssertion(Annotation( "NCBITaxon:9606"^^xsd:string) Annotation( "OBOL:accepted"^^xsd:string) Annotation( ) "hand digit 2 epithelium") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005645") AnnotationAssertion(rdfs:label "manual digit 2 epithelium") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (manual digit 3 epithelium) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An epithelium that is part of a manual digit 3.") AnnotationAssertion( "EHDAA2:0000524") AnnotationAssertion( "EMAPA:17436") AnnotationAssertion(Annotation( "OBOL:accepted"^^xsd:string) "fore limb digit 3 epithelium") AnnotationAssertion(Annotation( ) Annotation( ) "manual digit III epithelium") AnnotationAssertion(Annotation( "NCBITaxon:9606"^^xsd:string) Annotation( "OBOL:accepted"^^xsd:string) Annotation( ) "hand digit 3 epithelium") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005646") AnnotationAssertion(rdfs:label "manual digit 3 epithelium") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (manual digit 4 epithelium) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An epithelium that is part of a manual digit 4.") AnnotationAssertion( "EHDAA2:0000530") AnnotationAssertion( "EMAPA:17439") AnnotationAssertion(Annotation( "OBOL:accepted"^^xsd:string) "fore limb digit 4 epithelium") AnnotationAssertion(Annotation( ) Annotation( ) "manual digit IV epithelium") AnnotationAssertion(Annotation( "NCBITaxon:9606"^^xsd:string) Annotation( "OBOL:accepted"^^xsd:string) Annotation( ) "hand digit 4 epithelium") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005647") AnnotationAssertion(rdfs:label "manual digit 4 epithelium") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (manual digit 5 epithelium) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An epithelium that is part of a manual digit 5.") AnnotationAssertion( "EHDAA2:0000536") AnnotationAssertion( "EMAPA:17442") AnnotationAssertion(Annotation( "OBOL:accepted"^^xsd:string) "fore limb digit 5 epithelium") AnnotationAssertion(Annotation( ) Annotation( ) "manual digit V epithelium") AnnotationAssertion(Annotation( "NCBITaxon:9606"^^xsd:string) Annotation( "OBOL:accepted"^^xsd:string) Annotation( ) "hand digit 5 epithelium") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005648") AnnotationAssertion(rdfs:label "manual digit 5 epithelium") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pedal digit 2 epithelium) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An epithelium that is part of a pedal digit 2.") AnnotationAssertion( "EHDAA2:0002043") AnnotationAssertion( "EMAPA:17464") AnnotationAssertion(Annotation( "OBOL:accepted"^^xsd:string) "hind limb digit 2 epithelium") AnnotationAssertion(Annotation( ) Annotation( ) "pedal digit II epithelium") AnnotationAssertion(Annotation( "NCBITaxon:9606"^^xsd:string) Annotation( "OBOL:accepted"^^xsd:string) Annotation( ) "foot digit 2 epithelium") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005649") AnnotationAssertion(rdfs:label "pedal digit 2 epithelium") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pedal digit 3 epithelium) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An epithelium that is part of a pedal digit 3.") AnnotationAssertion( "EHDAA2:0002048") AnnotationAssertion( "EMAPA:17467") AnnotationAssertion(Annotation( "OBOL:accepted"^^xsd:string) "hind limb digit 3 epithelium") AnnotationAssertion(Annotation( ) Annotation( ) "pedal digit III epithelium") AnnotationAssertion(Annotation( "NCBITaxon:9606"^^xsd:string) Annotation( "OBOL:accepted"^^xsd:string) Annotation( ) "foot digit 3 epithelium") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005650") AnnotationAssertion(rdfs:label "pedal digit 3 epithelium") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pedal digit 4 epithelium) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An epithelium that is part of a pedal digit 4.") AnnotationAssertion( "EHDAA2:0002053") AnnotationAssertion( "EMAPA:17470") AnnotationAssertion(Annotation( "OBOL:accepted"^^xsd:string) "hind limb digit 4 epithelium") AnnotationAssertion(Annotation( ) Annotation( ) "pedal digit IV epithelium") AnnotationAssertion(Annotation( "NCBITaxon:9606"^^xsd:string) Annotation( "OBOL:accepted"^^xsd:string) Annotation( ) "foot digit 4 epithelium") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005651") AnnotationAssertion(rdfs:label "pedal digit 4 epithelium") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pedal digit 5 epithelium) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An epithelium that is part of a pedal digit 5.") AnnotationAssertion( "EHDAA2:0002058") AnnotationAssertion( "EMAPA:17473") AnnotationAssertion(Annotation( "OBOL:accepted"^^xsd:string) "hind limb digit 5 epithelium") AnnotationAssertion(Annotation( ) Annotation( ) "pedal digit V epithelium") AnnotationAssertion(Annotation( "NCBITaxon:9606"^^xsd:string) Annotation( "OBOL:accepted"^^xsd:string) Annotation( ) "foot digit 5 epithelium") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005652") AnnotationAssertion(rdfs:label "pedal digit 5 epithelium") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (upper jaw molar epithelium) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A dental epithelium that is part of a upper jaw molar.") AnnotationAssertion( "EHDAA2:0002126") AnnotationAssertion( "EMAPA:17943") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005653") AnnotationAssertion(rdfs:label "upper jaw molar epithelium") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lower jaw molar epithelium) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A dental epithelium that is part of a lower jaw molar.") AnnotationAssertion( "EHDAA2:0001026") AnnotationAssertion( "EMAPA:17922") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005654") AnnotationAssertion(rdfs:label "lower jaw molar epithelium") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (right lung accessory lobe epithelium) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An epithelium that is part of a right lung accessory lobe.") AnnotationAssertion( "EHDAA2:0001735") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005655") AnnotationAssertion(rdfs:label "right lung accessory lobe epithelium") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lens vesicle epithelium) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An epithelium that is part of a lens vesicle.") AnnotationAssertion( "EHDAA2:0000987") AnnotationAssertion( "EMAPA:17165") AnnotationAssertion( "VHOG:0000532") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005656") AnnotationAssertion(rdfs:label "lens vesicle epithelium") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (crus commune epithelium) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An epithelium that is part of a crus commune.") AnnotationAssertion( "EMAPA:17820") AnnotationAssertion( "RETIRED_EHDAA2:0000332") AnnotationAssertion( "VHOG:0000478") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005657") AnnotationAssertion(rdfs:label "crus commune epithelium") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (secondary palatal shelf epithelium) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An epithelium that is part of a secondary palatal shelf.") AnnotationAssertion( "EHDAA2:0001365") AnnotationAssertion( "EMAPA:17363") AnnotationAssertion( "FMA:312465") AnnotationAssertion( "VHOG:0001040") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "VHOG:0001040") "palatal shelf epithelium") AnnotationAssertion( "UBERON:0005658") AnnotationAssertion(rdfs:label "secondary palatal shelf epithelium") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (primary palate epithelium) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An epithelium that is part of a primary palate.") AnnotationAssertion( "EHDAA2:0001500") AnnotationAssertion( "EMAPA:17643") AnnotationAssertion( "FMA:313406") AnnotationAssertion( "VHOG:0001025") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005659") AnnotationAssertion(rdfs:label "primary palate epithelium") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (2nd arch ectoderm) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An ectoderm that is part of a pharyngeal arch 2.") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001062") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "DOI:10.1046/j.1469-7580.2001.19910133.x Graham A. The development and evolution of the pharyngeal arches. J Anat (2001)"^^xsd:string) "In all vertebrates, the pharyngeal apparatus develops from a series of bulges found on the lateral surface of the head, the pharyngeal arches, which consist of a number of different embryonic cell types. Each arch has an external covering of ectoderm and inner covering of endoderm, and between these a mesenchymal filling of neural crest with a central core of mesoderm.[well established][VHOG]") AnnotationAssertion( "EHDAA2:0000055") AnnotationAssertion( "EMAPA:16277") AnnotationAssertion( "EMAPA:16397") AnnotationAssertion( "EMAPA:16398") AnnotationAssertion( "RETIRED_EHDAA2:0000064") AnnotationAssertion( "VHOG:0001062") AnnotationAssertion(Annotation( "VHOG:0001062") "2nd pharyngeal arch ectoderm") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005660") AnnotationAssertion(rdfs:label "2nd arch ectoderm") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (3rd arch ectoderm) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An ectoderm that is part of a pharyngeal arch 3.") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000946") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "DOI:10.1046/j.1469-7580.2001.19910133.x Graham A. The development and evolution of the pharyngeal arches. J Anat (2001)"^^xsd:string) "In all vertebrates, the pharyngeal apparatus develops from a series of bulges found on the lateral surface of the head, the pharyngeal arches, which consist of a number of different embryonic cell types. Each arch has an external covering of ectoderm and inner covering of endoderm, and between these a mesenchymal filling of neural crest with a central core of mesoderm.[well established][VHOG]") AnnotationAssertion( "EHDAA2:0000072") AnnotationAssertion( "EMAPA:16400") AnnotationAssertion( "EMAPA:16582") AnnotationAssertion( "EMAPA:16584") AnnotationAssertion( "RETIRED_EHDAA2:0000079") AnnotationAssertion( "VHOG:0000946") AnnotationAssertion(Annotation( "VHOG:0000946") "3rd pharyngeal arch ectoderm") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005661") AnnotationAssertion(rdfs:label "3rd arch ectoderm") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (4th arch ectoderm) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An ectoderm that is part of a pharyngeal arch 4.") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001095") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "DOI:10.1046/j.1469-7580.2001.19910133.x Graham A. The development and evolution of the pharyngeal arches. J Anat (2001)"^^xsd:string) "In all vertebrates, the pharyngeal apparatus develops from a series of bulges found on the lateral surface of the head, the pharyngeal arches, which consist of a number of different embryonic cell types. Each arch has an external covering of ectoderm and inner covering of endoderm, and between these a mesenchymal filling of neural crest with a central core of mesoderm.[well established][VHOG]") AnnotationAssertion( "EHDAA2:0004032") AnnotationAssertion( "EMAPA:16762") AnnotationAssertion( "EMAPA:16764") AnnotationAssertion( "EMAPA:16768") AnnotationAssertion( "RETIRED_EHDAA2:0000094") AnnotationAssertion( "VHOG:0001095") AnnotationAssertion(Annotation( "VHOG:0001095") "4th pharyngeal arch ectoderm") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005662") AnnotationAssertion(rdfs:label "4th arch ectoderm") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (2nd arch endoderm) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An endoderm that is part of a pharyngeal arch 2.") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001108") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "DOI:10.1046/j.1469-7580.2001.19910133.x Graham A. The development and evolution of the pharyngeal arches. J Anat (2001)"^^xsd:string) "In all vertebrates, the pharyngeal apparatus develops from a series of bulges found on the lateral surface of the head, the pharyngeal arches, which consist of a number of different embryonic cell types. Each arch has an external covering of ectoderm and inner covering of endoderm, and between these a mesenchymal filling of neural crest with a central core of mesoderm.[well established][VHOG]") AnnotationAssertion( "EHDAA2:0000061") AnnotationAssertion( "EMAPA:16274") AnnotationAssertion( "EMAPA:16276") AnnotationAssertion( "EMAPA:16278") AnnotationAssertion( "RETIRED_EHDAA2:0000065") AnnotationAssertion( "VHOG:0001108") AnnotationAssertion(Annotation( "VHOG:0001108") "2nd pharyngeal arch endoderm") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005664") AnnotationAssertion(rdfs:label "2nd arch endoderm") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (3rd arch endoderm) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An endoderm that is part of a pharyngeal arch 3.") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001081") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "DOI:10.1046/j.1469-7580.2001.19910133.x Graham A. The development and evolution of the pharyngeal arches. J Anat (2001)"^^xsd:string) "In all vertebrates, the pharyngeal apparatus develops from a series of bulges found on the lateral surface of the head, the pharyngeal arches, which consist of a number of different embryonic cell types. Each arch has an external covering of ectoderm and inner covering of endoderm, and between these a mesenchymal filling of neural crest with a central core of mesoderm.[well established][VHOG]") AnnotationAssertion( "EHDAA2:0000075") AnnotationAssertion( "EMAPA:16401") AnnotationAssertion( "EMAPA:16585") AnnotationAssertion( "EMAPA:16587") AnnotationAssertion( "RETIRED_EHDAA2:0000080") AnnotationAssertion( "VHOG:0001081") AnnotationAssertion(Annotation( "VHOG:0001081") "3rd pharyngeal arch endoderm") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005665") AnnotationAssertion(rdfs:label "3rd arch endoderm") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (4th arch endoderm) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An endoderm that is part of a pharyngeal arch 4.") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001092") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "DOI:10.1046/j.1469-7580.2001.19910133.x Graham A. The development and evolution of the pharyngeal arches. J Anat (2001)"^^xsd:string) "In all vertebrates, the pharyngeal apparatus develops from a series of bulges found on the lateral surface of the head, the pharyngeal arches, which consist of a number of different embryonic cell types. Each arch has an external covering of ectoderm and inner covering of endoderm, and between these a mesenchymal filling of neural crest with a central core of mesoderm.[well established][VHOG]") AnnotationAssertion( "EHDAA2:0004033") AnnotationAssertion( "EMAPA:16765") AnnotationAssertion( "EMAPA:16767") AnnotationAssertion( "EMAPA:16769") AnnotationAssertion( "RETIRED_EHDAA2:0000095") AnnotationAssertion( "VHOG:0001092") AnnotationAssertion(Annotation( "VHOG:0001092") "4th pharyngeal arch endoderm") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005666") AnnotationAssertion(rdfs:label "4th arch endoderm") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (connecting stalk mesoderm) AnnotationAssertion( "EHDAA2:0000314") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005667") AnnotationAssertion(rdfs:label "connecting stalk mesoderm") SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (peritoneal cavity mesothelium) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A mesothelium that is part of a peritoneal cavity.") AnnotationAssertion(Annotation( "EMAPA"^^xsd:string) "we believe that this corresponds to EMAPA:16139 based on synonyms and parenthood") AnnotationAssertion(Annotation( "EMAPA:16139") Annotation( ) "peritoneum") AnnotationAssertion( ) AnnotationAssertion( "BTO:0003156") AnnotationAssertion( "EHDAA2:0001447") AnnotationAssertion( "EMAPA:16139") AnnotationAssertion( "FMA:18147") AnnotationAssertion(Annotation( "EMAPA:16139") "mesothelium of peritoneal component") AnnotationAssertion(Annotation( "FMA:18147") "mesothelium of peritoneum") AnnotationAssertion(Annotation( "BTO:0003156") "peritoneal mesothelium") AnnotationAssertion(Annotation( "EMAPA:16139") "peritoneal mesothelium") AnnotationAssertion(Annotation( "FMA:18147") "peritoneum mesothelium") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005669") AnnotationAssertion(rdfs:label "peritoneal cavity mesothelium") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (greater omentum mesothelium) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A mesothelium that is part of a greater omentum.") AnnotationAssertion( "RETIRED_EHDAA2:0000721") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005670") AnnotationAssertion(rdfs:label "greater omentum mesothelium") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (greater sac mesothelium) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A mesothelium that is part of a greater sac.") AnnotationAssertion( "EMAPA:16887") AnnotationAssertion( "RETIRED_EHDAA2:0000725") AnnotationAssertion( "VHOG:0000440") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "VHOG:0000440") "greater sac mehomhelium") AnnotationAssertion( "UBERON:0005671") AnnotationAssertion(rdfs:label "greater sac mesothelium") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (right lung endothelium) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An endothelium that is part of a right lung.") AnnotationAssertion( "EHDAA2:0001755") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005672") AnnotationAssertion(rdfs:label "right lung endothelium") SubClassOf( ) SubClassOf( ) SubClassOf( ) # Class: (left lung endothelium) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An endothelium that is part of a left lung.") AnnotationAssertion( "EHDAA2:0000961") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005673") AnnotationAssertion(rdfs:label "left lung endothelium") SubClassOf( ) SubClassOf( ) SubClassOf( ) # Class: (right lung cranial lobe endothelium) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An endothelium that is part of a upper lobe of right lung.") AnnotationAssertion( "EHDAA:4991") AnnotationAssertion( "RETIRED_EHDAA2:0001750") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005674") AnnotationAssertion(rdfs:label "right lung cranial lobe endothelium") SubClassOf( ) SubClassOf( ) # Class: (right lung caudal lobe endothelium) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An endothelium that is part of a lower lobe of right lung.") AnnotationAssertion( "EHDAA:4983") AnnotationAssertion( "RETIRED_EHDAA2:0001742") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005675") AnnotationAssertion(rdfs:label "right lung caudal lobe endothelium") SubClassOf( ) SubClassOf( ) # Class: (right lung accessory lobe endothelium) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An endothelium that is part of a right lung accessory lobe.") AnnotationAssertion( "EHDAA:4975") AnnotationAssertion( "RETIRED_EHDAA2:0001734") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005676") AnnotationAssertion(rdfs:label "right lung accessory lobe endothelium") SubClassOf( ) SubClassOf( ) # Class: (caecum mesentery) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A mesentery that is part of a caecum.") AnnotationAssertion( "RETIRED_EHDAA2:0000210") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005677") AnnotationAssertion(rdfs:label "caecum mesentery") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (right lung cranial lobe segmental bronchus) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A segmental bronchus that is part of a upper lobe of right lung.") AnnotationAssertion( "EHDAA2:0001754") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005678") AnnotationAssertion(rdfs:label "right lung cranial lobe segmental bronchus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (right lung caudal lobe segmental bronchus) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A segmental bronchus that is part of a lower lobe of right lung.") AnnotationAssertion( "EHDAA2:0001746") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005679") AnnotationAssertion(rdfs:label "right lung caudal lobe segmental bronchus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (right lung accessory lobe segmental bronchus) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A segmental bronchus that is part of a right lung accessory lobe.") AnnotationAssertion( "EHDAA2:0001738") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005680") AnnotationAssertion(rdfs:label "right lung accessory lobe segmental bronchus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (right lung upper lobe bronchiole) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A bronchiole that is part of a upper lobe of right lung.") AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0001749") AnnotationAssertion( "EMAPA:19006") AnnotationAssertion( "bronchiole of right upper lobe") AnnotationAssertion( "bronchiole of right upper lobe of lung") AnnotationAssertion(Annotation( "EHDAA2:0001749") "right lung cranial lobe bronchiole") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005681") AnnotationAssertion(rdfs:label "right lung upper lobe bronchiole") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (right lung accessory lobe bronchiole) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A bronchiole that is part of a right lung accessory lobe.") AnnotationAssertion( "EHDAA2:0001733") AnnotationAssertion( "EMAPA:19002") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005682") AnnotationAssertion(rdfs:label "right lung accessory lobe bronchiole") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete telencephalon lateral ventricle) AnnotationAssertion( "EHDAA2:0001984") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005683") AnnotationAssertion(rdfs:label "obsolete telencephalon lateral ventricle") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (midgut dorsal mesentery) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A dorsal mesentery that is part of a midgut.") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:16722") AnnotationAssertion( "EMAPA:17040") AnnotationAssertion( "EMAPA:18671") AnnotationAssertion( "RETIRED_EHDAA2:0001187") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005685") AnnotationAssertion(rdfs:label "midgut dorsal mesentery") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (caecum dorsal mesentery) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A dorsal mesentery that is part of a caecum.") AnnotationAssertion( "RETIRED_EHDAA2:0000208") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005686") AnnotationAssertion(rdfs:label "caecum dorsal mesentery") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (orbitosphenoid cartilage element) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An orbitosphenoid endochondral element that is composed primarily of cartilage tissue.") AnnotationAssertion( "EHDAA2:0001329") AnnotationAssertion( "EHDAA:9554") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "EHDAA2:0001329") "sphenoid lesser wing cartilage element") AnnotationAssertion( "UBERON:0005687") AnnotationAssertion(rdfs:label "orbitosphenoid cartilage element") SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (lens vesicle cavity) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An anatomical cavity that is part of a lens vesicle.") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000531") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0030223693 Liem KF, Bemis WE, Walker WF, Grande L, Functional Anatomy of the Vertebrates: An Evolutionary Perspective (2001) p.429"^^xsd:string) "(...) an essentially similar sequence of events occurs during the embryonic development of the vertebrate eye. The eye initially develops as a single median evagination of the diencephalon that soon bifurcates to form the paired optic vesicles. As each optic vesicle grows towards the body surface, its proximal part narrows as the optic stalk, and its distal part invaginates to form a two-layered optic cup. (...) The optic cup induces the overlying surface ectoderm first to thicken as a lens placode and then to invaginate and form a lens vesicle that differentiates into the lens.[well established][VHOG]") AnnotationAssertion( "cavity of lens") AnnotationAssertion(Annotation( "EHDAA2:0000986") "lens cavity") AnnotationAssertion( "EHDAA2:0000986") AnnotationAssertion( "EMAPA:17164") AnnotationAssertion( "VHOG:0000531") AnnotationAssertion(Annotation( "EMAPA:17164") "cavity of lens vesicle") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005688") AnnotationAssertion(rdfs:label "lens vesicle cavity") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (2nd arch mesenchyme) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "Mesenchyme that is part of a pharyngeal arch 2.") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001102") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "DOI:10.1046/j.1469-7580.2001.19910133.x Graham A. The development and evolution of the pharyngeal arches. J Anat (2001)"^^xsd:string) "In all vertebrates, the pharyngeal apparatus develops from a series of bulges found on the lateral surface of the head, the pharyngeal arches, which consist of a number of different embryonic cell types. Each arch has an external covering of ectoderm and inner covering of endoderm, and between these a mesenchymal filling of neural crest with a central core of mesoderm.[well established][VHOG]") AnnotationAssertion( "EHDAA2:0000066") AnnotationAssertion( "EHDAA:625") AnnotationAssertion( "EMAPA:16279") AnnotationAssertion( "FMA:295698") AnnotationAssertion( "VHOG:0001102") AnnotationAssertion(Annotation( "VHOG:0001102") "2nd pharyngeal arch mesenchyme") AnnotationAssertion( "uberon") AnnotationAssertion( "2nd branchial arch mesenchyme") AnnotationAssertion( "pharyngeal arch 2 mesenchyme") AnnotationAssertion( "UBERON:0005689") AnnotationAssertion(rdfs:label "2nd arch mesenchyme") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (3rd arch mesenchyme) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "Mesenchyme that is part of a pharyngeal arch 3.") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001083") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "DOI:10.1046/j.1469-7580.2001.19910133.x Graham A. The development and evolution of the pharyngeal arches. J Anat (2001)"^^xsd:string) "In all vertebrates, the pharyngeal apparatus develops from a series of bulges found on the lateral surface of the head, the pharyngeal arches, which consist of a number of different embryonic cell types. Each arch has an external covering of ectoderm and inner covering of endoderm, and between these a mesenchymal filling of neural crest with a central core of mesoderm.[well established][VHOG]") AnnotationAssertion( "EHDAA2:0000081") AnnotationAssertion( "EHDAA:1094") AnnotationAssertion( "EMAPA:16402") AnnotationAssertion( "FMA:295700") AnnotationAssertion( "VHOG:0001083") AnnotationAssertion(Annotation( "VHOG:0001083") "3rd pharyngeal arch mesenchyme") AnnotationAssertion( "uberon") AnnotationAssertion( "3rd branchial arch mesenchyme") AnnotationAssertion( "pharyngeal arch 3 mesenchyme") AnnotationAssertion( "UBERON:0005690") AnnotationAssertion(rdfs:label "3rd arch mesenchyme") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (4th arch mesenchyme) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "Mesenchyme that is part of a pharyngeal arch 4.") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001052") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "DOI:10.1046/j.1469-7580.2001.19910133.x Graham A. The development and evolution of the pharyngeal arches. J Anat (2001)"^^xsd:string) "In all vertebrates, the pharyngeal apparatus develops from a series of bulges found on the lateral surface of the head, the pharyngeal arches, which consist of a number of different embryonic cell types. Each arch has an external covering of ectoderm and inner covering of endoderm, and between these a mesenchymal filling of neural crest with a central core of mesoderm.[well established][VHOG]") AnnotationAssertion( "EHDAA2:0000096") AnnotationAssertion( "EHDAA:1677") AnnotationAssertion( "EMAPA:16770") AnnotationAssertion( "FMA:295702") AnnotationAssertion( "VHOG:0001052") AnnotationAssertion(Annotation( "VHOG:0001052") "4th pharyngeal arch mesenchyme") AnnotationAssertion( "uberon") AnnotationAssertion( "4th branchial arch mesenchyme") AnnotationAssertion( "pharyngeal arch 4 mesenchyme") AnnotationAssertion( "UBERON:0005691") AnnotationAssertion(rdfs:label "4th arch mesenchyme") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (manual digit 2 mesenchyme) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "Mesenchyme that is part of a developing manual digit 2.") AnnotationAssertion( "EHDAA2:0000519") AnnotationAssertion( "EMAPA:17434") AnnotationAssertion(Annotation( "OBOL:accepted"^^xsd:string) "fore limb digit 2 mesenchyme") AnnotationAssertion(Annotation( ) Annotation( ) "manual digit II mesenchyme") AnnotationAssertion(Annotation( "NCBITaxon:9606"^^xsd:string) Annotation( "OBOL:accepted"^^xsd:string) Annotation( ) "hand digit 2 mesenchyme") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005692") AnnotationAssertion(rdfs:label "manual digit 2 mesenchyme") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (manual digit 3 mesenchyme) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "Mesenchyme that is part of a developing manual digit 3.") AnnotationAssertion( "EHDAA2:0000525") AnnotationAssertion( "EMAPA:17437") AnnotationAssertion(Annotation( "OBOL:accepted"^^xsd:string) "fore limb digit 3 mesenchyme") AnnotationAssertion(Annotation( ) Annotation( ) "manual digit III mesenchyme") AnnotationAssertion(Annotation( "NCBITaxon:9606"^^xsd:string) Annotation( "OBOL:accepted"^^xsd:string) Annotation( ) "hand digit 3 mesenchyme") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005693") AnnotationAssertion(rdfs:label "manual digit 3 mesenchyme") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (manual digit 4 mesenchyme) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "Mesenchyme that is part of a developing manual digit 4.") AnnotationAssertion( "EHDAA2:0000531") AnnotationAssertion( "EMAPA:17440") AnnotationAssertion(Annotation( "OBOL:accepted"^^xsd:string) "fore limb digit 4 mesenchyme") AnnotationAssertion(Annotation( ) Annotation( ) "manual digit IV mesenchyme") AnnotationAssertion(Annotation( "NCBITaxon:9606"^^xsd:string) Annotation( "OBOL:accepted"^^xsd:string) Annotation( ) "hand digit 4 mesenchyme") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005694") AnnotationAssertion(rdfs:label "manual digit 4 mesenchyme") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (manual digit 5 mesenchyme) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "Mesenchyme that is part of a developing manual digit 5.") AnnotationAssertion( "EHDAA2:0000537") AnnotationAssertion( "EMAPA:17443") AnnotationAssertion(Annotation( "OBOL:accepted"^^xsd:string) "fore limb digit 5 mesenchyme") AnnotationAssertion(Annotation( ) Annotation( ) "manual digit V mesenchyme") AnnotationAssertion(Annotation( "NCBITaxon:9606"^^xsd:string) Annotation( "OBOL:accepted"^^xsd:string) Annotation( ) "hand digit 5 mesenchyme") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005695") AnnotationAssertion(rdfs:label "manual digit 5 mesenchyme") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pedal digit 2 mesenchyme) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "Mesenchyme that is part of a developing pedal digit 2.") AnnotationAssertion( "EHDAA2:0002044") AnnotationAssertion( "EMAPA:17465") AnnotationAssertion(Annotation( "OBOL:accepted"^^xsd:string) "hind limb digit 2 mesenchyme") AnnotationAssertion(Annotation( ) Annotation( ) "pedal digit II mesenchyme") AnnotationAssertion(Annotation( "NCBITaxon:9606"^^xsd:string) Annotation( "OBOL:accepted"^^xsd:string) Annotation( ) "foot digit 2 mesenchyme") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005696") AnnotationAssertion(rdfs:label "pedal digit 2 mesenchyme") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pedal digit 3 mesenchyme) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "Mesenchyme that is part of a developing pedal digit 3.") AnnotationAssertion( "EHDAA2:0002049") AnnotationAssertion( "EMAPA:17468") AnnotationAssertion(Annotation( "OBOL:accepted"^^xsd:string) "hind limb digit 3 mesenchyme") AnnotationAssertion(Annotation( ) Annotation( ) "pedal digit III mesenchyme") AnnotationAssertion(Annotation( "NCBITaxon:9606"^^xsd:string) Annotation( "OBOL:accepted"^^xsd:string) Annotation( ) "foot digit 3 mesenchyme") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005697") AnnotationAssertion(rdfs:label "pedal digit 3 mesenchyme") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pedal digit 4 mesenchyme) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "Mesenchyme that is part of a developing pedal digit 4.") AnnotationAssertion( "EHDAA2:0002054") AnnotationAssertion( "EMAPA:17471") AnnotationAssertion(Annotation( "OBOL:accepted"^^xsd:string) "hind limb digit 4 mesenchyme") AnnotationAssertion(Annotation( ) Annotation( ) "pedal digit IV mesenchyme") AnnotationAssertion(Annotation( "NCBITaxon:9606"^^xsd:string) Annotation( "OBOL:accepted"^^xsd:string) Annotation( ) "foot digit 4 mesenchyme") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005698") AnnotationAssertion(rdfs:label "pedal digit 4 mesenchyme") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pedal digit 5 mesenchyme) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "Mesenchyme that is part of a developing pedal digit 5.") AnnotationAssertion( "EHDAA2:0002059") AnnotationAssertion( "EMAPA:17474") AnnotationAssertion(Annotation( "OBOL:accepted"^^xsd:string) "hind limb digit 5 mesenchyme") AnnotationAssertion(Annotation( ) Annotation( ) "pedal digit V mesenchyme") AnnotationAssertion(Annotation( "NCBITaxon:9606"^^xsd:string) Annotation( "OBOL:accepted"^^xsd:string) Annotation( ) "foot digit 5 mesenchyme") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005699") AnnotationAssertion(rdfs:label "pedal digit 5 mesenchyme") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (upper jaw molar odontogenic papilla) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An odontogenic papilla that is part of a upper jaw molar.") AnnotationAssertion( "EHDAA2:0002127") AnnotationAssertion( "EHDAA:8051") AnnotationAssertion( "EMAPA:17944") AnnotationAssertion(Annotation( "EHDAA2:0002127") "upper jaw molar dental papilla") AnnotationAssertion( "upper molar mesenchyme") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005700") AnnotationAssertion(rdfs:label "upper jaw molar odontogenic papilla") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (lower jaw molar odontogenic papilla) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An odontogenic papilla that is part of a lower jaw molar.") AnnotationAssertion( "EHDAA2:0001027") AnnotationAssertion( "EHDAA:8015") AnnotationAssertion( "EMAPA:17923") AnnotationAssertion(Annotation( "EHDAA2:0001027") "lower jaw molar dental papilla") AnnotationAssertion( "lower molar mesenchyme") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005701") AnnotationAssertion(rdfs:label "lower jaw molar odontogenic papilla") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (optic eminence mesenchyme) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "Mesenchyme that is part of a optic eminence.") AnnotationAssertion( "EHDAA:942") AnnotationAssertion( "EMAPA:16324") AnnotationAssertion( "RETIRED_EHDAA2:0001310") AnnotationAssertion( "VHOG:0001073") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005702") AnnotationAssertion(rdfs:label "optic eminence mesenchyme") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (secondary palatal shelf mesenchyme) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "Mesenchyme that is part of a developing secondary palatal shelf.") AnnotationAssertion( "EHDAA2:0001366") AnnotationAssertion( "EHDAA:9287") AnnotationAssertion( "EMAPA:17364") AnnotationAssertion( "VHOG:0001063") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "VHOG:0001063") "palatal shelf mesenchyme") AnnotationAssertion( "UBERON:0005704") AnnotationAssertion(rdfs:label "secondary palatal shelf mesenchyme") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (primary palate mesenchyme) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "Mesenchyme that is part of a developing primary palate.") AnnotationAssertion( "EHDAA2:0001501") AnnotationAssertion( "EHDAA:6968") AnnotationAssertion( "EMAPA:17644") AnnotationAssertion( "VHOG:0001024") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005705") AnnotationAssertion(rdfs:label "primary palate mesenchyme") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (obsolete central nervous system cranial ganglion) AnnotationAssertion( "UBERON:0001714") AnnotationAssertion( "EHDAA2:0000226") AnnotationAssertion( "EHDAA:920") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005706") AnnotationAssertion(rdfs:label "obsolete central nervous system cranial ganglion") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (upper jaw incisor odontogenic papilla) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An odontogenic papilla that is part of a upper jaw incisor.") AnnotationAssertion( "EHDAA2:0002123") AnnotationAssertion( "EMAPA:17941") AnnotationAssertion( "upper incisor mesenchyme") AnnotationAssertion(Annotation( "EHDAA2:0002123") "upper jaw incisor dental papilla") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005707") AnnotationAssertion(rdfs:label "upper jaw incisor odontogenic papilla") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (lower jaw incisor odontogenic papilla) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An odontogenic papilla that is part of a lower jaw incisor.") AnnotationAssertion( "EHDAA2:0001023") AnnotationAssertion( "EMAPA:17920") AnnotationAssertion( "lower incisor mesenchyme") AnnotationAssertion(Annotation( "EHDAA2:0001023") "lower jaw incisor dental papilla") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005708") AnnotationAssertion(rdfs:label "lower jaw incisor odontogenic papilla") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (upper jaw incisor epithelium) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A dental epithelium that is part of a upper jaw incisor.") AnnotationAssertion( "EHDAA2:0002122") AnnotationAssertion( "EMAPA:17940") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005709") AnnotationAssertion(rdfs:label "upper jaw incisor epithelium") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lower jaw incisor epithelium) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A dental epithelium that is part of a lower jaw incisor.") AnnotationAssertion( "EHDAA2:0001022") AnnotationAssertion( "EMAPA:17919") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005710") AnnotationAssertion(rdfs:label "lower jaw incisor epithelium") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (foregut duodenum mesentery) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A mesentery of duodenum that is part of a foregut.") AnnotationAssertion( "EHDAA2:0000564") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005711") AnnotationAssertion(rdfs:label "foregut duodenum mesentery") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (midgut duodenum mesentery) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A mesentery of duodenum that is part of a midgut.") AnnotationAssertion( "EHDAA2:0001193") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005712") AnnotationAssertion(rdfs:label "midgut duodenum mesentery") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete lens vesicle capsule) AnnotationAssertion( "EHDAA:4739") AnnotationAssertion( "RETIRED_EHDAA2:0000985") AnnotationAssertion( "UBERON:0001804") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005714") AnnotationAssertion(rdfs:label "obsolete lens vesicle capsule") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (footplate apical ectodermal ridge) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An apical ectodermal ridge that is part of a footplate.") AnnotationAssertion( "EHDAA2:0000547") AnnotationAssertion( "EMAPA:17251") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005719") AnnotationAssertion(rdfs:label "footplate apical ectodermal ridge") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (hindbrain venous system) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A venous system that is part of a hindbrain.") AnnotationAssertion( "EHDAA2:0000776") AnnotationAssertion( "EMAPA:18632") AnnotationAssertion( "VHOG:0001322") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "VHOG:0001322") "rhombencephalon venous system") AnnotationAssertion( "UBERON:0005720") AnnotationAssertion(rdfs:label "hindbrain venous system") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pronephric mesoderm) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A mesoderm that has the potential to develop into a pronephros.") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0011090") Annotation( "AAO"^^xsd:string) Annotation( "XAO:curator") "Portion of tissue that consists of the mesenchymal precursor to the pronephric kidney and that begins to separate from the intermediate mesoderm at NF stage 21 and epithelializes by NF stage 30.[AAO]") AnnotationAssertion( "AAO:0011090") AnnotationAssertion( "EFO:0003479") AnnotationAssertion( "TAO:0000067") AnnotationAssertion( "VHOG:0001239") AnnotationAssertion( "XAO:0000264") AnnotationAssertion( "ZFA:0000067") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "XAO:0000264") "pronephric anlage") AnnotationAssertion(Annotation( "XAO:0000264") "pronephric bulge") AnnotationAssertion(Annotation( "XAO:0000264") "pronephric mesenchyme") AnnotationAssertion(Annotation( "XAO:0000264") "pronephric primordium") AnnotationAssertion( "UBERON:0005721") AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "the intermediate mesoderm of the chick embryo acquires its ability to form kidneys through its interactions with the paraxial mesoderm [ISBN:9780878932504 \"Developmental Biology\", PMID:10720431 \"Signals from trunk paraxial mesoderm induce pronephros formation in chick intermediate mesoderm\"]. These interactions induce the expression of TFs including Lim1, Pax2 and Pax6 that cause the intermediate mesoderm to form the kidney") AnnotationAssertion(rdfs:label "pronephric mesoderm") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "ZFA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "Bgee:AN"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (obsolete nephrotome) AnnotationAssertion(Annotation( ) "The nephrotome is a section of the mesoderm. It gives rise to the pronephros and eventually to the rest of the kidney. A nephrotome is an obsolete term used to describe rounded mesodermal portions of the forming pronephros. In old texts the pronephros is described as forming through the fusion of multiple nephrotomes. Modern visualization methods such as scanning electron microscopy, in situ hybridization and confocal microscopy, combined with the simple approach of peeling off the epidermis to see the forming kidney, have shown that this is not the case. Nephric mesenchyme separates from the intermediate mesoderm as a single elongated primordia. As this primordia begins to undergo epithelialization the anterior portions of the pronephros form rounded protrusions, which then later become the dorsal branches of the pronephros that link to nephrostomes (distinct from nephrotomes). These rounded bumps are probably the structures observed in histological sections that are referred to as nephrotomes. Nephrostomes are thin ciliated funnels that link pronephric nephrons to the ceolom, and are not related to nephrotomes.") AnnotationAssertion( ) AnnotationAssertion( "BTO:0003673") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0003673") "intermediate cell mass") AnnotationAssertion(Annotation( ) "nephromere") AnnotationAssertion( "UBERON:0005722") AnnotationAssertion(rdfs:label "obsolete nephrotome") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (floor plate spinal cord region) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A multi-tissue structure that is part of a spinal cord and is part of a floor plate.") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000787") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "DOI:10.1016/S0959-4388(99)00003-3 Holland LZ and Holland ND, Chordate origins of the vertebrate central nervous system. Current Opinion in Neurobiology (1999)") "In summary, the available data for tunicates, amphioxus, and vertebrates indicate that a floorplate-like structure was already present in the proximate invertebrate ancestor of the vertebrates and that the genetic mechanisms for DV patterning of the nerve cord were also largely in place.[well established][VHOG]") AnnotationAssertion( "UBERON:0005247") AnnotationAssertion( "EMAPA:17578") AnnotationAssertion( "TAO:0000890") AnnotationAssertion( "VHOG:0000787") AnnotationAssertion( "XAO:0000306") AnnotationAssertion( "ZFA:0000890") AnnotationAssertion(Annotation( "VHOG:0000787") "floor plate spinal cord") AnnotationAssertion(Annotation( "ZFA:0000890") "floorplate spinal cord") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "VHOG:0000787") "spinal cord floor") AnnotationAssertion( "UBERON:0005723") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "floor plate spinal cord region") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (roof plate spinal cord region) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A tissue that is part of a spinal cord and is part of a roof plate.") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000777") Annotation( "VHOG"^^xsd:string) Annotation( ) "Roof plate that is part of the spinal cord. [Bgee_curator][VHOG]") AnnotationAssertion( "UBERON:0005246") AnnotationAssertion( "EMAPA:17586") AnnotationAssertion( "TAO:0001177") AnnotationAssertion( "VHOG:0000777") AnnotationAssertion( "XAO:0000022") AnnotationAssertion( "ZFA:0001177") AnnotationAssertion(Annotation( "VHOG:0000777") "roof plate spinal cord") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "VHOG:0000777") "roofplate spinal cord") AnnotationAssertion(Annotation( "VHOG:0000777") "spinal cord roof") AnnotationAssertion( "UBERON:0005724") AnnotationAssertion(rdfs:label "roof plate spinal cord region") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (olfactory system) AnnotationAssertion(Annotation( ) "A sensory system that is capable of olfaction (the sensory perception of smell).") AnnotationAssertion( "consider splitting into main and accessory. See also: vomeronasal organ") AnnotationAssertion( "we make the relationship to nervous system 'overlaps', as the olfactory system includes e.g. apertures in the cranium that are not part of the nervous system") AnnotationAssertion(Annotation( ) "The olfactory system is the sensory system used for olfaction, or the sense of smell. Most mammals and reptiles have two distinct parts to their olfactory system: a main olfactory system and an accessory olfactory system. The main olfactory system detects volatile, airborne substances, while the accessory olfactory system senses fluid-phase stimuli. Behavioral evidence indicates that most often, the stimuli detected by the accessory olfactory system are pheromones. The olfactory system is often spoken of along with the gustatory system as the chemosensory senses because both transduce chemical signals into perception[WP][Wikipedia:Olfactory_system].") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0000978") Annotation( "AAO"^^xsd:string) Annotation( "AAO:EJS"^^xsd:string) "The sensory system used for olfaction (the sense of smell).[AAO]") AnnotationAssertion( "In mammals, the main olfactory system detects odorants that are inhaled through the nose, where they contact the main olfactory epithelium, which contains various olfactory receptors. These olfactory receptors are membrane proteins of bipolar olfactory receptor neurons in the olfactory epithelium. Rather than binding specific ligands like most receptors, olfactory receptors display affinity for a range of odor molecules. Olfactory neurons transduce receptor activation into electrical signals in neurons. The signals travel along the olfactory nerve, which belongs to the peripheral nervous system. This nerve terminates in the olfactory bulb, which belongs to the central nervous system. The complex set of olfactory receptors on different olfactory neurons can distinguish a new odor from the background environmental odors and determine the concentration of the odor[WP].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0000334") AnnotationAssertion( "AAO:0000978") AnnotationAssertion( "BILA:0000144") AnnotationAssertion( "EFO:0001973") AnnotationAssertion( "EMAPA:36004") AnnotationAssertion( "FMA:7190") AnnotationAssertion( "MA:0002445") AnnotationAssertion( "NCIT:C94501") AnnotationAssertion( "NLXANAT:090806") AnnotationAssertion( "OpenCyc:Mx4rvViw75wpEbGdrcN5Y29ycA") AnnotationAssertion( "TAO:0001149") AnnotationAssertion(Annotation( "ncithesaurus:Olfactory_System") "UMLS:C0228065") AnnotationAssertion( "XAO:0003196") AnnotationAssertion( "ZFA:0001149") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005725") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "olfactory system") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (chemosensory system) AnnotationAssertion( "BILA:0000139") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005726") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "chemosensory system") SubClassOf( ) # Class: (obsolete somitomere) AnnotationAssertion(Annotation( ) "Obsoleted definition: In the developing vertebrate embryo, the somitomeres are loose masses of paraxial mesoderm derived cells that form along each side of the neural tube towards the end of the third gestational week. The approximately 50 pairs of somitomeres begin developing in the cranial (head) region, continuing in a caudal (tail) direction until the end of week four[WP].") AnnotationAssertion( "UBERON:0009617") AnnotationAssertion( ) AnnotationAssertion( "FMA:85523") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "somatomere") AnnotationAssertion( "UBERON:0005727") AnnotationAssertion(rdfs:comment "Around the same time that experimental embryology in avian systems was most productive in the context of vertebrate head development, researchers examining embryonic head morphology with the scanning electron microscope introduced the idea of cephalic 'somitomeres'. By removing the surface ectoderm from the head, they reported that the paraxial mesoderm was organized into pseudosegmental units resembling incompletely differentiated somites, which they called somitomeres (Meier 1979; Jacobson 1988, 1993; Jacobson and Meier 1984). Since then, however, there has been no clear evidence for somitomeres. It remains unclear how they relate to the epithelial cysts in the head mesoderm - http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2895339/]") AnnotationAssertion(rdfs:label "obsolete somitomere") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (extraembryonic mesoderm) AnnotationAssertion( "EHDAA2:0000474") AnnotationAssertion( "EMAPA:31862") AnnotationAssertion( "EMAPA:31863") AnnotationAssertion( "FMA:296719") AnnotationAssertion( "VHOG:0000616") AnnotationAssertion( "extra-embryonic mesoderm") AnnotationAssertion( "extraembryonic mesenchyme") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005728") AnnotationAssertion(rdfs:label "extraembryonic mesoderm") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (pectoral appendage field) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A limb/fin field that has the potential to develop into a pectoral appendage bud mesenchyme.") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0001453") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "Embryonic region that develops into the pectoral fin bud.[TAO]") AnnotationAssertion( "TAO:0001453") AnnotationAssertion( "ZFA:0001453") AnnotationAssertion( "pectoral appendage field of lateral plate mesoderm") AnnotationAssertion(Annotation( "ZFA:0001453") Annotation( ) "pectoral fin field") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005729") AnnotationAssertion(rdfs:label "pectoral appendage field") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pelvic appendage field) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A limb/fin field that has the potential to develop into a pelvic appendage bud mesenchyme.") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0001454") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "Embryonic region that develops into the pelvic fin bud.[TAO]") AnnotationAssertion( "TAO:0001454") AnnotationAssertion( "ZFA:0001454") AnnotationAssertion( "pelvic appendage field of lateral plate mesoderm") AnnotationAssertion(Annotation( "ZFA:0001454") Annotation( ) "pelvic fin field") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005730") AnnotationAssertion(rdfs:label "pelvic appendage field") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (paired limb/fin field) AnnotationAssertion(Annotation( "ISBN:9780878932504") "A ring of cells capable of forming a limb or paired fin[Gilbert,modified].") AnnotationAssertion( "we represent the field as being a part of the LPM (consistent with ZFA, Gilbert). As a consequence, the relationship between limb bud (with is ectoderm+mesenchyme) stands in a weaker has_developmental_contribution_from relation to the field - TODO implement this.") AnnotationAssertion( "limb/fin field of lateral plate mesoderm") AnnotationAssertion( "paired limb/fin field") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005732") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "paired limb/fin field") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "ISBN:9780878932504") Annotation( "ZFA-inferred") ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (limb field) AnnotationAssertion(Annotation( "ISBN:9780878932504") "A ring of cells capable of forming a limb.") AnnotationAssertion( "limb field of lateral plate mesoderm") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005733") AnnotationAssertion(rdfs:comment "the central portion of the limb field gives rise to the limb proper. mesenchyme cells proliferate from from the somatic layer of limb field lateral plate mesoderm (limb skeletal precursors) and from the somites (limb muscle precursors) . these mesenchymal cells accumulate under the ectedermal tissue to make a limb bud. // The lateral plate mesoderm in the limb field is also special in that it will induce myoblasts to migrate out from the somites and enter the limb bud. No other region of the lateral plate mesoderm will do that (Hayashi and Ozawa 1995)") AnnotationAssertion(rdfs:label "limb field") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (tunica adventitia of blood vessel) AnnotationAssertion(Annotation( ) Annotation( "ISBN:0073040584"^^xsd:string) "The outermost layer of a blood vessel, composed mainly of fibrous tissue.") AnnotationAssertion( "TODO - note terminological problems. WP says tunica external layer of blood vessel. FMA says tunica externa = adventitia, and is FMA adventitia covers other kinds of vessels. Here we opt for a lengthier name that attempts to disambiguate. There is no precise FMA equivalent, as FMA has tunica externa of arteries, veins, genital ducts etc as siblings") AnnotationAssertion(Annotation( ) "The outermost layer of a blood vessel, surrounding the tunica media. It is mainly composed of collagen. The collagen serves to anchor the blood vessel to nearby organs, giving it stability[Wikipedia:Tunica_externa_(vessels)].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0002010") AnnotationAssertion( "EMAPA:36299") AnnotationAssertion( "NCIT:C33818") AnnotationAssertion(Annotation( "ncithesaurus:Tunica_Adventitia") "UMLS:C0225342") AnnotationAssertion(Annotation( ) "adventitia externa") AnnotationAssertion(Annotation( ) "tunica adventitia") AnnotationAssertion(Annotation( ) "tunica adventitia of vessel") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "external coat") AnnotationAssertion(Annotation( ) Annotation( ) "tunica adventitia vasorum") AnnotationAssertion(Annotation( ) Annotation( ) "tunica externa vasorum") AnnotationAssertion( "UBERON:0005734") AnnotationAssertion(rdfs:label "tunica adventitia of blood vessel") AnnotationAssertion( "Illu:artery.jpg"^^xsd:anyURI) SubClassOf(Annotation( "cjm"^^xsd:string) ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (tunica intima of artery) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A tunica intima that is part of a artery.") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:36293") AnnotationAssertion( "EV:0100028") AnnotationAssertion( "FMA:14272") AnnotationAssertion( "galen:IntimaOfArtery") AnnotationAssertion(Annotation( "EV:0100028") "arterial intima") AnnotationAssertion(Annotation( "FMA:14272") "tunica interna (intima)(arteriae)") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005740") AnnotationAssertion(rdfs:label "tunica intima of artery") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete adventitia of uterus) AnnotationAssertion( "EMAPA:29925") AnnotationAssertion( "EMAPA:29933") AnnotationAssertion( "UBERON:0001297") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005741") AnnotationAssertion(rdfs:label "obsolete adventitia of uterus") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (adventitia) AnnotationAssertion(Annotation( ) "An outermost connective tissue covering of an organ, vessel, or other structure[WP].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0002010") AnnotationAssertion( "FMA:45635") AnnotationAssertion(Annotation( ) "tunica advetitia") AnnotationAssertion(Annotation( "FMA:45635") "tunica externa") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005742") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "adventitia") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/e/e8/Illu_esophageal_layers.jpg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete central nervous system plus retina) AnnotationAssertion(Annotation( "ZFA"^^xsd:string) "this class was originally added to account for some definitions of the CNS that includes retina. Most existing AOs use CNS to exclude the retina (ZFA retina NOT part_of CNS. XAO excludes retina in text def, retina (previously) part_of CNS. MA retina NOT part_of CNS. NIF_GA retina NOT part_of CNS. Fly also excludes it. EFO also excludes it. GO also excludes it). Whilst logically valid, the use case is better served by following the developmental relationships for retina. See: http://groups.google.com/group/pons-representation-and-deployment/browse_thread/thread/957da161a4dd4f85/a340e30cc8e9b2ce?lnk=gst&q=retina#a340e30cc8e9b2ce") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005743") AnnotationAssertion(rdfs:label "obsolete central nervous system plus retina") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (bone foramen) AnnotationAssertion(Annotation( "TAO:curator") "Anatomical space that is an opening in a bone, usually for passage of blood vessels or nerves.") AnnotationAssertion(Annotation( "FMA"^^xsd:string) "in FMA and ZFA this is a conduit space, not a conduit. Note there may be some additional disambiguation required: foramen is used loosely in the sense of any opening (e.g. foramen primum). FMA appears to use cranial conduit (undefined) in the sense of any foramen of the skull (includes mental foramen, which is not in the cranium proper).") AnnotationAssertion(Annotation( "ZFA:0005386") "foramen") AnnotationAssertion( "AAO:0010438") AnnotationAssertion( "TAO:0001736") AnnotationAssertion( "VHOG:0001760") AnnotationAssertion( "ZFA:0005386") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005744") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "bone foramen") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/8/81/Gray193.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (optic foramen) AnnotationAssertion(Annotation( ) Annotation( ) Annotation( "ISBN:0-683-40008-8"^^xsd:string) Annotation( "MP:0010704") "An opening in the skull through which cranial nerve II passes.[MP].") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001408") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( ) "An aperture in the root of the lesser wing of the sphenoid bone transmitting the optic nerve. [TFD][VHOG]") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0002025") Annotation( "TAO"^^xsd:string) Annotation( "TAO:wd"^^xsd:string) "Foramen in the orbital region of the neurocranium for the passage of the optic nerve (cranial nerve II).[TAO]") AnnotationAssertion(Annotation( "MP:0010704") Annotation( "MP") "The short canal through the orbitosphenoid bone at the apex of the orbit that gives passage to the optic nerve and the opthalmic artery") AnnotationAssertion( "UBERON:0006269") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0000342") AnnotationAssertion( "EHDAA2:0001312") AnnotationAssertion( "EHDAA:10646") AnnotationAssertion( "EMAPA:18716") AnnotationAssertion( "FMA:54774") AnnotationAssertion( "TAO:0002025") AnnotationAssertion( "VHOG:0001408") AnnotationAssertion( "ZFA:0005428") AnnotationAssertion(Annotation( ) "optic canal") AnnotationAssertion(Annotation( ) "optic foramen") AnnotationAssertion(Annotation( "ZFA:0005428") Annotation( "ZFIN:ZDB-PUB-961014-192") "optic nerve (II) foramen") AnnotationAssertion(Annotation( "TAO:0002025") "optic nerve foramen") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "canalis opticus") AnnotationAssertion(Annotation( ) Annotation( ) "foramen opticum ossis sphenoidalis") AnnotationAssertion( "UBERON:0005745") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "In teleost fishes the opening is wider that in mammals. Due to the longer and deeper shape in mammals, this is usually called the optic canal; sometimes the term optic foramen may be used for the opening of the canal, but here we use this term to denote the entire space together with surrounding bone surface.") AnnotationAssertion(rdfs:label "optic foramen") AnnotationAssertion( "Orbita:mensch.jpg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA-abduced-lr"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (primary vitreous) AnnotationAssertion(Annotation( "MP:0010711") "Embryonic fibrovascular mesodermal tissue located between the optic cup and lens vesicle that normally regresses during the development of the vitreous body[MP].") AnnotationAssertion(Annotation( "EHDAA2"^^xsd:string) "Acellular in EHDAA2, MP defs says tissue") AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0001502") AnnotationAssertion( "EHDAA:5707") AnnotationAssertion(Annotation( "MP:0010711") "primary vitreous") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "EHDAA2:0001502") "primary vitreous humour") AnnotationAssertion( "UBERON:0005746") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "primary vitreous") SubClassOf(Annotation( "MP-def") Annotation( "EHDAA2"^^xsd:string) ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "cjm"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (glomerular tuft) AnnotationAssertion(Annotation( ) Annotation( ) Annotation( "MP:0005325") "The capillary loops of the kidney that normally function as a filtration unit[MP].") AnnotationAssertion(Annotation( "GudMap") "...Soon afterwards, endothelial cells invade to make a capillary knot-like outgrowth, the glomerular tuft, which goes on to form the glomerulus") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:28239") AnnotationAssertion( "uberon") AnnotationAssertion( "glomerular capillary tuft") AnnotationAssertion(Annotation( "EMAPA:28239") Annotation( ) "glomerulus") AnnotationAssertion( "UBERON:0005749") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "glomerular tuft") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "Wikipedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (glomerular parietal epithelium) AnnotationAssertion(Annotation( ) Annotation( "MP:0011498") "A single layer of simple squamous epithelium in the glomerular capsule. Does not function in filtration[UBERON]. outer layer of the glomerular capsule composed of a single layer of simple squamous epithelium[MP].") AnnotationAssertion( "TODO - check this. BTO has podocytes under here") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0005253") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "Simple squamous epithelium that lines the capsule of the renal glomerulus.[TAO]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0002296") AnnotationAssertion( "EMAPA:27979") AnnotationAssertion( "EMAPA:28260") AnnotationAssertion( "EMAPA:35969") AnnotationAssertion( "FMA:74272") AnnotationAssertion( "MA:0002605") AnnotationAssertion( "NCIT:C33271") AnnotationAssertion( "TAO:0005253") AnnotationAssertion(Annotation( "ncithesaurus:Parietal_Layer_of_Bowman_s_Capsule") "UMLS:C0227645") AnnotationAssertion( "ZFA:0005253") AnnotationAssertion(Annotation( "MP:0011498") "Bowman's parietal epithelium") AnnotationAssertion(Annotation( "BTO:0002296") "capsular epithelium") AnnotationAssertion(Annotation( "FMA:74272") "glomerular capsule parietal layer") AnnotationAssertion(Annotation( "FMA:74272") "outer layer of glomerular capsule") AnnotationAssertion(Annotation( "MP:0011498") "parietal capsular epithelium") AnnotationAssertion(Annotation( "ZFA:0005253") "parietal epithelial layer") AnnotationAssertion(Annotation( "MP:0011498") "parietal epithelium of Bowman's capsule") AnnotationAssertion( "parietal layer of Bowman capsule") AnnotationAssertion(Annotation( "MP:0011498") "parietal layer of Bowman's capsule") AnnotationAssertion(Annotation( "FMA:74272") "parietal layer of glomerular capsule") AnnotationAssertion(Annotation( "MP:0011498") "parietal layer of glomerular capsule") AnnotationAssertion(Annotation( "ZFA:0005253") "renal glomerular capsule epithelium") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "EMAPA:35969") "kidney parietal epithelium") AnnotationAssertion( "UBERON:0005750") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "glomerular parietal epithelium") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (visceral layer of glomerular capsule) AnnotationAssertion(Annotation( "BTO:0001515") Annotation( "MP:0011497") "The inner, or visceral, layer of the renal glomerular capsule, overlying the capillaries, composed of podocytes, and separated from the outer, or parietal, layer by the capsular (Bowman's) space[BTO]. Lies just above the thickened glomerular basement membrane and is made of podocytes. Beneath the visceral layer lie the glomerular capillaries[WP]. inner layer of the glomerular capsule surrounding the capillary endothelial cells and composed of highly specialized epithelial cells (podocytes) that are separated by filtration slits; the visceral layer is separated from the outer parietal layer by the urinary space (also known as the Bowman's or capsular space)[MP].") AnnotationAssertion( "TODO - check - the BTO class 'glomerular epithelium' is the visceral layer. But GO uses 'glomerular epithelium' as the mereological sum of P+V layers") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:74273") AnnotationAssertion( "NCIT:C33879") AnnotationAssertion(Annotation( "ncithesaurus:Visceral_Layer_of_Bowman_s_Capsule") "UMLS:C0227644") AnnotationAssertion(Annotation( "MP:0011497") "Bowman's visceral epithelium") AnnotationAssertion(Annotation( "MP:0011497") "glomerular capsule visceral layer") AnnotationAssertion(Annotation( ) "inner epithelial layer of Bowman's capsule") AnnotationAssertion(Annotation( ) "podocyte layer of Bowman's capsule") AnnotationAssertion(Annotation( ) "visceral epithelium of Bowman's capsule") AnnotationAssertion(Annotation( "MP:0011497") "visceral epithelium of Bowman's capsule") AnnotationAssertion(Annotation( "MP:0011497") "visceral layer of Bowman's capsule") AnnotationAssertion(Annotation( "MP:0011497") "visceral layer of glomerular capsule") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005751") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "visceral layer of glomerular capsule") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (caudal part of nephrogenic cord) AnnotationAssertion(Annotation( ) "The metanephros develops from the most caudal part of the nephrogenic cord that is itself derived from the intermediate plate mesoderm.") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "caudal portion of nephrogenic cord") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "caudal region of nephrogenic cord") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "rear part of nephrogenic cord") AnnotationAssertion(Annotation( ) "rear portion of nephrogenic cord") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005753") AnnotationAssertion(rdfs:label "caudal part of nephrogenic cord") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (rostral part of nephrogenic cord) AnnotationAssertion(Annotation( ) "The initial renal anlage that develops from the most rostral part of the nephrogenic cord is termed the pronephros.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005754") AnnotationAssertion(rdfs:label "rostral part of nephrogenic cord") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (urorectal septum) AnnotationAssertion(Annotation( ) Annotation( "MP:anna"^^xsd:string) "The ridge of mesoderm covered with endoderm that in the early developing embryo partitions the endodermal cloaca into the primary urogenital sinus (ventrally) and the anorectal canal of the hindgut (dorsally); the urorectal septum eventually fuses with the cloacal membrane, dividing it into a dorsal anal membrane and a larger ventral urogenital membrane - this area of fusion is represented in the adult by the perineal body[MP].") AnnotationAssertion( "todo - use to define cloacal septation in GO") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000018") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( ) "A ridge of mesoderm covered with endoderm that in the early developing embryo divides the endodermal cloaca into the urogenital sinus and the rectum. [TFD][VHOG]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000018") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0721676678 Romer AS, Vertebrate body (1970) p.388-89 and Figure 300") "In mammals the lowly monotremes still have a cloaca. Higher types have done away with this structure and have a separate anal outlet for the rectum. The monotreme cloaca shows the initiation of this subdivision. The cloaca has such includes only the distal part, roughly comparable to the proctodeum. The more proximal part is divided into (1) a large dorsal passage into which the intestine opens, the coprodeum, and (2) a ventral portion, the urodeum with which the bladder connects. (...) the development of the placental mammals recapitulates in many respects the phylogenetic story. In the sexually indifferent stage of placental mammal there is a cloaca. While the indifferent stage still persists, a septum develops, and extends out to the closing membrane. This divides the cloaca into two chambers: a coprodeum continuous with the gut above, and a urodeum or urogenital sinus below.[well established][VHOG]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0002152") AnnotationAssertion( "EHDAA:5921") AnnotationAssertion( "EMAPA:17212") AnnotationAssertion( "MA:0003235") AnnotationAssertion( "NCIT:C34323") AnnotationAssertion(Annotation( "ncithesaurus:Urorectal_Septum") "UMLS:C1519838") AnnotationAssertion( "VHOG:0000018") AnnotationAssertion(Annotation( ) Annotation( ) "septum urorectale") AnnotationAssertion(Annotation( "MP:anna"^^xsd:string) "urorectal fold") AnnotationAssertion(Annotation( "MP:anna"^^xsd:string) "urorectal membrane") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "VHOG:0000018") "cloacal septum") AnnotationAssertion( "UBERON:0005760") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "urorectal septum") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/f/fb/Gray992.png"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "MA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (acellular membrane) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An acellular anatomical structure that is the bounding layer of a anatomical structure.") AnnotationAssertion( "FMA:63871") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005764") AnnotationAssertion(rdfs:label "acellular membrane") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (basement membrane of epithelium) AnnotationAssertion(Annotation( ) Annotation( ) "An acellular membrane that is part of the epithelium, lies adjacent to the epithelial cells, and is the fusion of the the basal lamina and the reticular lamina.") AnnotationAssertion( "this class represents a continuous sheet of basement membrane which can underlie multiple epithelial cells over large regions. In contrast, the GO class 'basal membrane' represents a portion of substance on the scale of a single cell.") AnnotationAssertion(Annotation( ) ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010596") AnnotationAssertion( "FMA:63872") AnnotationAssertion( "GAID:915") AnnotationAssertion( "NCIT:C13191") AnnotationAssertion(Annotation( "ncithesaurus:Basement_Membrane") "UMLS:C0004799") AnnotationAssertion(Annotation( "FMA:63872") "basement membrane of connective tissue") AnnotationAssertion(Annotation( ) Annotation( ) "membrana basalis") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:63872") "basement membrane") AnnotationAssertion( "UBERON:0005769") AnnotationAssertion(rdfs:label "basement membrane of epithelium") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (glomerular basement membrane) AnnotationAssertion(Annotation( "MGI:anna"^^xsd:string) Annotation( "MP:0011348") "The layer of extracellular matrix that lies between the endothelium of the glomerular capillaries and the podocytes of the inner or visceral layer of the Bowman capsule; it is a fusion of the endothelial cell and podocyte basal laminas and acts as a physical barrier and an ion-selective filter.") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0005285") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:ZDB-PUB-000824-1") "Membrane between the mesonephric podocytes and the renal glomerular capillaries. It is a trilaminar structure composed of the fused basement membranes of the glomerular capillaries and basement membrane of the podocytes. The capillary membranes touch the GBM at contact points that are separated by pores. The membrane is semi-permeable allowing water and small molecules to pass into the renal capsular space.[TAO]") AnnotationAssertion(Annotation( ) "GBM") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:28251") AnnotationAssertion( "EMAPA:30965") AnnotationAssertion( "FMA:74274") AnnotationAssertion( "MA:0001659") AnnotationAssertion( "NCIT:C32683") AnnotationAssertion( "TAO:0005285") AnnotationAssertion(Annotation( "ncithesaurus:Glomerular_Basement_Membrane") "UMLS:C0599297") AnnotationAssertion( "ZFA:0005285") AnnotationAssertion(Annotation( "MA:0001659") "glomerular capillary basement membrane") AnnotationAssertion(Annotation( "ZFA:0005285") "glomerular filtration membrane") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005777") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "glomerular basement membrane") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/d/de/PhysiologieGlom%C3%A9rulaire.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lamina densa of glomerular basement membrane) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Middle layer of the glomerular basement membrane.") AnnotationAssertion(Annotation( "ZFA:0005286") "lamina densa") AnnotationAssertion( ) AnnotationAssertion( "FMA:74276") AnnotationAssertion( "NCIT:C32916") AnnotationAssertion( "TAO:0005286") AnnotationAssertion(Annotation( "ncithesaurus:Lamina_Densa") "UMLS:C1235665") AnnotationAssertion( "ZFA:0005286") AnnotationAssertion(Annotation( "FMA:74276") "lamina densa of glomerular basement membrane") AnnotationAssertion(Annotation( "FMA:74276") "middle layer of glomerular basement membrane") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005787") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "lamina densa of glomerular basement membrane") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lamina rara interna) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Layer of the glomerular basement membrane adjacent to the glomerular capillary.") AnnotationAssertion( ) AnnotationAssertion( "FMA:74277") AnnotationAssertion( "NCIT:C32920") AnnotationAssertion( "TAO:0005287") AnnotationAssertion(Annotation( "ncithesaurus:Lamina_Rara_Interna") "UMLS:C1517719") AnnotationAssertion( "ZFA:0005287") AnnotationAssertion(Annotation( "FMA:74277") "internal layer of glomerular basement membrane") AnnotationAssertion(Annotation( "FMA:74277") "lamina interna of glomerular basement membrane") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005788") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "lamina rara interna") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lamina rara externa) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Layer of the glomerular basement membrane adjacent to the podocytes and capsular space.") AnnotationAssertion( ) AnnotationAssertion( "FMA:74275") AnnotationAssertion( "NCIT:C32919") AnnotationAssertion( "TAO:0005288") AnnotationAssertion(Annotation( "ncithesaurus:Lamina_Rara_Externa") "UMLS:C1517718") AnnotationAssertion( "ZFA:0005288") AnnotationAssertion(Annotation( "FMA:74275") "external layer of glomerular basement membrane") AnnotationAssertion(Annotation( "FMA:74275") "lamina externa of glomerular basement membrane") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005789") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "lamina rara externa") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (nephric ridge) AnnotationAssertion(Annotation( ) "Nephric tubules (nephrons) form embryonically along the nephric ridge. The ridge comprises three regions; anterior, middle and posterior. The functional kidney uses nephrons from only one or two regions of the ridge. A pronephric kidney uses only the nephrons from the anterior region of the ridge. A mesonephric kidney uses only the middle region, a metanephric kidney uses only the posterior region and an opisthonephric kidney uses the middle and posterior regions.") AnnotationAssertion( "TODO - check ridge vs cord vs nephrogenic cord vs blastema") AnnotationAssertion( "EHDAA2:0001242") AnnotationAssertion( "EHDAA:1015") AnnotationAssertion( "EMAPA:16368") AnnotationAssertion( "VHOG:0001240") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "VHOG:0001240") "nephric cord") AnnotationAssertion( "UBERON:0005792") AnnotationAssertion(rdfs:label "nephric ridge") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (embryonic uterus) AnnotationAssertion( ) AnnotationAssertion( "FMA:72173") AnnotationAssertion(Annotation( "FMA:72173") "fetal uterus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005795") AnnotationAssertion(rdfs:label "embryonic uterus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (duplex uterus) AnnotationAssertion(Annotation( ) "The duplex uterus is doubled, and is found in monotremes, marsupials, elephants and rodents.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005796") AnnotationAssertion(rdfs:label "duplex uterus") SubClassOf( ) # Class: (bipartite uterus) AnnotationAssertion(Annotation( ) "The bipartite uterus is y-shaped externally and divided internally (ungulates, carnivores).") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005797") AnnotationAssertion(rdfs:label "bipartite uterus") SubClassOf( ) # Class: (bicornuate uterus) AnnotationAssertion(Annotation( ) Annotation( ) Annotation( ) "The bicornate uterus is y-shaped but has no internal partition (some ungulates, whales).") AnnotationAssertion( ) AnnotationAssertion( "bicornate uterus") AnnotationAssertion( "uterus with two horns") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005798") AnnotationAssertion(rdfs:label "bicornuate uterus") SubClassOf( ) # Class: (simplex uterus) AnnotationAssertion(Annotation( ) "The simplex uterus has only one uterine chamber (primates).") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005799") AnnotationAssertion(rdfs:label "simplex uterus") SubClassOf( ) # Class: (section of aorta) AnnotationAssertion(Annotation( "ncithesaurus:Aortic_Segment") "Any portion of the aorta including the ascending and descending aorta, and aortic arch or a portion of the aortic orifice of the left ventricle.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:13087") AnnotationAssertion( "NCIT:C34027") AnnotationAssertion(Annotation( "ncithesaurus:Aortic_Segment") "UMLS:C0506947") AnnotationAssertion( "aortic section") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:13087") "aortic segment") AnnotationAssertion( "portion of aorta") AnnotationAssertion(Annotation( "FMA:13087") "segment of aorta") AnnotationAssertion( "UBERON:0005800") AnnotationAssertion(rdfs:label "section of aorta") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (dorsal aorta) AnnotationAssertion(Annotation( ) Annotation( "GO:0035907") "The dorsal aorta is a blood vessel in a single-pass circulatory system that carries oxygenated blood from the gills to the rest of the body. In a single-pass circulatory system blood passes once through the heart to supply the body once.") AnnotationAssertion(Annotation( ) "Each primitive aorta receives anteriorly a vein 'the vitelline vein' from the yolk-sac, and is prolonged backward on the lateral aspect of the notochord under the name of the dorsal aorta. The dorsal aortae give branches to the yolk-sac, and are continued backward through the body-stalk as the umbilical arteries to the villi of the chorion. The two dorsal aortae combine to become the descending aorta in later development[WP].") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0000014") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "Principal unpaired, median artery of the trunk, leading from the paired roots (radices) of the dorsal aorta to the caudal artery. Kimmel et al, 1995.[TAO]") AnnotationAssertion(Annotation( "BTO:0004673") "The artery in vertebrate embryos that transports blood from the aortic arches to the trunk and limbs. In adult fish it is a major artery that carries oxygenated blood from the efferent branchial arteries to branches that supply the body organ. In adult tetrapods it arises from the systemic arch") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0000014") Annotation( "TAO"^^xsd:string) "relationship loss: part_of axial vasculature (TAO:0001073)[TAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000264") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0030223693 Liem KF, Bemis WE, Walker WF, Grande L, Functional Anatomy of the Vertebrates: An Evolutionary Perspective (2001) p.620") "When vertebrates first appeared, they must have possessed a ventral and dorsal aorta with aortic arches between them.[well established][VHOG]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0011029") AnnotationAssertion( "BTO:0004673") AnnotationAssertion( "EHDAA:402") AnnotationAssertion( "EMAPA:18606") AnnotationAssertion( "TAO:0000014") AnnotationAssertion( "VHOG:0000264") AnnotationAssertion( "XAO:0000051") AnnotationAssertion( "ZFA:0000014") AnnotationAssertion(Annotation( "ZFA:0000014") "DA") AnnotationAssertion(Annotation( "XAO:0000051") Annotation( ) "aorta dorsalis") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "aortae dorsales") AnnotationAssertion(Annotation( "VHOG:0000264") "dorsal aorta root") AnnotationAssertion(Annotation( ) Annotation( ) "dorsal aortae") AnnotationAssertion(Annotation( "VHOG:0000264") "dorsal aortic root") AnnotationAssertion(Annotation( ) Annotation( ) "dorsal aortæ") AnnotationAssertion( "UBERON:0005805") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "dorsal aorta") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/f/fb/Gray459.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (portal system) AnnotationAssertion(Annotation( ) "In the circulatory system of animals, a portal venous system occurs when a capillary bed drains into another capillary bed through veins, without first going through the heart. Both capillary beds and the blood vessels that connect them are considered part of the portal venous system. They are relatively uncommon as the majority of capillary beds drain into veins which then drain into the heart, not into another capillary bed. Portal venous systems are considered venous because the blood vessels that join the two capillary beds are either veins or venules. Examples of such systems include the hepatic portal system and the hypophyseal portal system. Unqualified, 'portal venous system' often refers to the hepatic portal system. For this reason, 'portal vein' most commonly refers to the hepatic portal vein[WP].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:45628") AnnotationAssertion( "MESH:D011168") AnnotationAssertion( "NCIT:C33344") AnnotationAssertion(Annotation( "ncithesaurus:Portal_Venous_System") "UMLS:C0226727") AnnotationAssertion(Annotation( "FMA:45628") "portal venous system") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005806") AnnotationAssertion(rdfs:label "portal system") SubClassOf( ) # Class: (rostral ventrolateral medulla) AnnotationAssertion(Annotation( ) "Control of blood pressure is crucially dependent on the integrity of a small region of the brainstem called the ventrolateral medulla. Within this part of the brain are the cells that control the heart, blood vessels, swallowing, breathing and many other functions of the body that are not noticed at a conscious level; such unconscious activities are known as 'Autonomic'. One of these regions is the Rostral Ventrolateral Medulla (RVLM) is also known as the pressor area of the medulla (medulla pressor). It receives inhibitory GABAergic input from the caudal ventrolateral medulla (CVLM). The RVLM is the primary regulator of the sympathetic nervous system, sending excitatory fibers (catecholaminergic) to the sympathetic preganglionic neurons in the spinal cord, via reticulospinal tract[WP].") AnnotationAssertion( ) AnnotationAssertion( "BTO:0002778") AnnotationAssertion(Annotation( ) "RVLM") AnnotationAssertion(Annotation( ) "medulla pressor") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005807") AnnotationAssertion(rdfs:label "rostral ventrolateral medulla") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (bone tissue of long bone) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A bone tissue that is part of a long bone.") AnnotationAssertion( ) AnnotationAssertion( "FMA:83117") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:83117") "osseous tissue of long bone") AnnotationAssertion( "UBERON:0005808") AnnotationAssertion(rdfs:label "bone tissue of long bone") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (cortex of manus bone) AnnotationAssertion(Annotation( "PHENOSCAPE:ad"^^xsd:string) "The outer or sperficial part of a bone of the manus.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005809") AnnotationAssertion(rdfs:label "cortex of manus bone") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (cervical vertebra 1 anterior tubercle) AnnotationAssertion(Annotation( "MP:0004658") "The conical ventral projection on the arch of the atlas.") AnnotationAssertion( "TODO - check: anterior vs ventral; arch vs transverse process") AnnotationAssertion( ) AnnotationAssertion( "FMA:23991") AnnotationAssertion( "MA:0002871") AnnotationAssertion(Annotation( "FMA:23991") "anterior tubercle of atlas") AnnotationAssertion(Annotation( "MA:0002871") "atlas ventral tubercle") AnnotationAssertion(Annotation( "MA:0002871") "cervical vertebra 1 ventral tubercle") AnnotationAssertion(Annotation( "FMA:23991") "tubercle of anterior arch of atlas") AnnotationAssertion(Annotation( "FMA:23991") "tuberculum anterius (atlas)") AnnotationAssertion(Annotation( "FMA:23991") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "tuberculum anterius atlantis") AnnotationAssertion(Annotation( "MP:0010731") "ventral tubercle of atlas") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005810") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "cervical vertebra 1 anterior tubercle") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (tubercle) AnnotationAssertion(Annotation( ) "A round nodule, small eminence, or warty outgrowth on an anatomical surface, such as bones, skin, or within the lungs (in the case of tuberculosis). They are also found on the leading edge of Humpback Whale's flippers, improving fluid flow over the flipper's surface[WP].") AnnotationAssertion( ) AnnotationAssertion( "AAO:0010605") AnnotationAssertion( "BTO:0002173") AnnotationAssertion( "FMA:75429") AnnotationAssertion( "uberon") AnnotationAssertion( "tuber") AnnotationAssertion( "UBERON:0005813") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "tubercle") SubClassOf( ) # Class: (arch of atlas) AnnotationAssertion(Annotation( ) "A vertebral arch that is part of the first cervical vertebra.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:23975") AnnotationAssertion(Annotation( "FMA:23975") "atlas arch") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005814") AnnotationAssertion(rdfs:label "arch of atlas") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (anterior tubercle of transverse process of cervical vertebra) AnnotationAssertion(Annotation( ) "The anterior arch forms about one-fifth of the ring: its anterior surface is convex, and presents at its center the anterior tubercle for the attachment of the Longus colli muscles.") AnnotationAssertion( ) AnnotationAssertion( "FMA:24126") AnnotationAssertion(Annotation( "FMA:24126") "anterior costal tubercle of transverse process of cervical vertebra") AnnotationAssertion(Annotation( "FMA:24126") "anterior tubercle of cervical vertebra") AnnotationAssertion(Annotation( "FMA:24126") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "tuberculum cervicales anterius vertebrae") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005815") AnnotationAssertion(rdfs:label "anterior tubercle of transverse process of cervical vertebra") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses(Annotation( "lexical"^^xsd:string) ) # Class: (posterior tubercle of transverse process of cervical vertebra) AnnotationAssertion(Annotation( ) "The posterior arch of a cervical vertebra forms about two-fifths of the circumference of the ring: it ends behind in the posterior tubercle, which is the rudiment of a spinous process and gives origin to the Recti capitis posteriores minores. The diminutive size of this process prevents any interference with the movements between the atlas and the skull.") AnnotationAssertion( ) AnnotationAssertion( "FMA:24128") AnnotationAssertion(Annotation( "FMA:24128") "posterior costal tubercle of transverse process of cervical vertebra") AnnotationAssertion(Annotation( "FMA:24128") "posterior tubercle of cervical vertebra") AnnotationAssertion(Annotation( "FMA:24128") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "tuberculum cervicales posterius vertebrae") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005816") AnnotationAssertion(rdfs:label "posterior tubercle of transverse process of cervical vertebra") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (neuraxis flexure) AnnotationAssertion(Annotation( "ZFIN:Curator") "An anatomical structure that is regional part of the central nervous system where there is a significant bend of the axis.") AnnotationAssertion( "ZFA:0005593") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005817") AnnotationAssertion(rdfs:label "neuraxis flexure") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (cephalic midbrain flexure) AnnotationAssertion(Annotation( "MP:0004203") "A sharp, ventrally concave bend in the developing midbrain of the embryo[MP].") AnnotationAssertion( "TODO - check ZFA") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0002181") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "Ventral bend in the brain occurring caudal to the adenohypophyseal placode.[TAO]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "TAO:0002181") AnnotationAssertion( "ZFA:0001640") AnnotationAssertion(Annotation( "ZFA:0001640") "cephalic flexure") AnnotationAssertion(Annotation( "MP:0004203") "cerebral flexure") AnnotationAssertion(Annotation( "MP:0004203") "cranial flexure") AnnotationAssertion(Annotation( ) "mesencephalic flexure") AnnotationAssertion(Annotation( "MP:0004203") "midbrain flexure") AnnotationAssertion(Annotation( "ZFA:0001640") "ventral flexure") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "flexura mesencephalica") AnnotationAssertion( "UBERON:0005818") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "cephalic midbrain flexure") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/c/ce/Gray651.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (cervical flexure) AnnotationAssertion(Annotation( "MP:0000913") "A ventrally concave flexure of the embryonic brain occurring at the junction of hindbrain and spinal cord[MP].") AnnotationAssertion(Annotation( "WP"^^xsd:string) "In humans develops by the 5th week of gestation") AnnotationAssertion( ) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005819") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "cervical flexure") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pontine flexure) AnnotationAssertion(Annotation( "MP:0000844") "A dorsally concave bend of the embryonic rhombencephalon that produces a thinning of the roof of the pons and medulla oblongata and defines the boundary between the metencephalon and myelencephalon in the embryo[MP].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MP:0000844") "(embryonic) hindbrain flexure") AnnotationAssertion(Annotation( "MP:0000844") "basicranial flexure") AnnotationAssertion(Annotation( "MP:0000844") "pontal flexure") AnnotationAssertion(Annotation( "MP:0000844") "transverse rhombencephalic flexure") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005820") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "pontine flexure") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (gracile fasciculus) AnnotationAssertion(Annotation( ) Annotation( ) Annotation( "GO:0021958") "A group of axons that are from neurons involved in proprioception from the lower trunk and lower limb[GO]. The fasciculus gracilis (tract of Goll) is a bundle of axon fibres in the dorsomedial spinal cord that carries information about fine touch, vibrations, and conscious proprioception from the lower part of the body to the brain stem. It is part of the posterior column of the spinal cord, which also contains the fasciculus cuneatus, which carries the same information from the upper part of the body. This tract and its continuation in the brain stem is often referred to as the posterior column-medial lemniscus pathway. The fasciculus gracilis is wedge-shaped on transverse section and lies next the posterior median septum, its base being at the surface of the medulla spinalis, and its apex directed toward the posterior gray commissure. It increases in size from below upward, and consists of long thin fibers that are derived from the posterior nerve roots, and ascend as far as the medulla oblongata, where they end in the nucleus gracilis. The tract of Goll was named after Swiss neuroanatomist Friedrich Goll[WP].") AnnotationAssertion( "distinction between axon tract and fasicle is unclear") AnnotationAssertion( "UBERON:0004168") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:gr") AnnotationAssertion( "BAMS:grf") AnnotationAssertion( "BM:Me-GF") AnnotationAssertion( "DHBA:12739") AnnotationAssertion( "FMA:258416") AnnotationAssertion( "HBA:265505586") AnnotationAssertion( "MBA:388") AnnotationAssertion( "NCIT:C33799") AnnotationAssertion(Annotation( "ncithesaurus:Tract_of_Goll") "UMLS:C0228522") AnnotationAssertion(Annotation( "FMA:258416") "fasciculus gracilis") AnnotationAssertion(Annotation( "FMA:258416") "gracile fascicle") AnnotationAssertion(Annotation( "GO:0021958") "gracilis tract") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "f. gracilis medullae spinalis") AnnotationAssertion(Annotation( ) "gracile column") AnnotationAssertion(Annotation( ) "gracile tract") AnnotationAssertion(Annotation( "GO:0021958") "tract of Goll") AnnotationAssertion( "UBERON:0005821") AnnotationAssertion(rdfs:label "gracile fasciculus") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/b/b2/Spinal_cord_tracts_-_English.svg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (gracile fasciculus of spinal cord) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A gracile fasciculus that is part of a spinal cord.") AnnotationAssertion( ) AnnotationAssertion( "FMA:73938") AnnotationAssertion(Annotation( "FMA:73938") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "fasciculus gracilis (medulla spinalis)") AnnotationAssertion(Annotation( "FMA:73938") "gracile fascicle of spinal cord") AnnotationAssertion(Annotation( "FMA:73938") "spinal cord segment of fasciculus gracilis") AnnotationAssertion(Annotation( "FMA:73938") "spinal cord segment of gracile fasciculus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005826") AnnotationAssertion(rdfs:label "gracile fasciculus of spinal cord") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (cuneate fasciculus) AnnotationAssertion(Annotation( ) Annotation( ) Annotation( "GO:0021959") "An axon tract in the spinal cord and medulla which primarily transmits information from the forelimb and trunk. It is part of the dorsal column-medial lemniscus pathway.") AnnotationAssertion( "we assign the synonym 'Burdachs tract' to the subclass. sometimes the term 'cuneate fasciculus' refers specifically to cuneate fasiculus of spinal cord. We use the term more broadly here.") AnnotationAssertion( "UBERON:0004169") AnnotationAssertion( ) AnnotationAssertion( "BAMS:cu") AnnotationAssertion( "BAMS:cuf") AnnotationAssertion( "BM:Me-CF") AnnotationAssertion( "DHBA:12731") AnnotationAssertion( "HBA:265505550") AnnotationAssertion( "MBA:380") AnnotationAssertion(Annotation( "GO:0021959") "cuneatus tract") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "cuneate column") AnnotationAssertion(Annotation( "BAMS:cuf") "cuneate fascicle") AnnotationAssertion(Annotation( ) "cuneate tract") AnnotationAssertion(Annotation( ) "fasciculus cuneatus") AnnotationAssertion(Annotation( ) "fasciculus cuneus") AnnotationAssertion( "UBERON:0005832") AnnotationAssertion(rdfs:label "cuneate fasciculus") SubClassOf( ) SubClassOf(Annotation( "FMA-abduced") ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (cuneate fasciculus of spinal cord) AnnotationAssertion(Annotation( ) Annotation( ) Annotation( "GO:0021959") "An axon tract in the spinal cord which primarily transmits information from the forelimb and trunk. It is part of the posterior column-medial lemniscus pathway.") AnnotationAssertion( "check ontology structure, isa parentage to fasciculus of spinal cord should be inferred. TODO - change definition to be the *whole* of the CF in the SC") AnnotationAssertion(Annotation( "FMA:73941") "cuneate fasciculus") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:73941") AnnotationAssertion( "NCIT:C33798") AnnotationAssertion(Annotation( "ncithesaurus:Tract_of_Burdach") "UMLS:C0228578") AnnotationAssertion(Annotation( "FMA:73941") "burdach's tract") AnnotationAssertion(Annotation( "FMA:73941") "cuneate fascicle of spinal cord") AnnotationAssertion(Annotation( "FMA:73941") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "fasciculus cuneatus") AnnotationAssertion(Annotation( "GO:0021959") "tract of Burdach") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "fasciculus cuneatus medullae spinalis") AnnotationAssertion( "UBERON:0005835") AnnotationAssertion(rdfs:label "cuneate fasciculus of spinal cord") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/b/b2/Spinal_cord_tracts_-_English.svg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (fasciculus of spinal cord) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A fascicle that is part of a spinal cord.") AnnotationAssertion( "FMA:75799") AnnotationAssertion(Annotation( "FMA:75799") "spinal cord fasciculus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005837") AnnotationAssertion(rdfs:label "fasciculus of spinal cord") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (fasciculus of brain) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A fascicle that is part of a brain.") AnnotationAssertion( "FMA:83844") AnnotationAssertion(Annotation( "FMA:83844") "brain fasciculus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005838") AnnotationAssertion(rdfs:label "fasciculus of brain") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (thoracic spinal cord dorsal column) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A subdivision of spinal cord dorsal column that is part of a thoracic spinal cord.") AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:1442") AnnotationAssertion( "FMA:258178") AnnotationAssertion(Annotation( "BIRNLEX:1442") "UMLS:C0228634") AnnotationAssertion(Annotation( "FMA:258178") "dorsal funiculus of thoracic segment of spinal cord") AnnotationAssertion(Annotation( "FMA:258178") "dorsal white column of thoracic segment of spinal cord") AnnotationAssertion(Annotation( "FMA:258178") "thoracic segment of dorsal funiculus of spinal cord") AnnotationAssertion(Annotation( "BIRNLEX:1442") "thoracic spinal cord posterior column") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005839") AnnotationAssertion(rdfs:label "thoracic spinal cord dorsal column") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses(Annotation( "NIFSTD"^^xsd:string) ) # Class: (sacral spinal cord dorsal column) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A subdivision of spinal cord dorsal column that is part of a sacral spinal cord.") AnnotationAssertion( "BIRNLEX:1514") AnnotationAssertion( "FMA:258198") AnnotationAssertion(Annotation( "BIRNLEX:1514") "sacral spinal cord posterior column") AnnotationAssertion(Annotation( "FMA:258198") "sacral subsegment of dorsal funiculus of spinal cord") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005840") AnnotationAssertion(rdfs:label "sacral spinal cord dorsal column") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses(Annotation( "NIFSTD"^^xsd:string) ) # Class: (cervical spinal cord dorsal column) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A subdivision of spinal cord dorsal column that is part of a cervical spinal cord.") AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:736") AnnotationAssertion( "FMA:258176") AnnotationAssertion(Annotation( "BIRNLEX:736") "UMLS:C0228617") AnnotationAssertion(Annotation( "FMA:258176") "cervical segment of dorsal funiculus of spinal cord") AnnotationAssertion(Annotation( "BIRNLEX:736") "cervical spinal cord posterior column") AnnotationAssertion(Annotation( "FMA:258176") "dorsal funiculus of cervical segment of spinal cord") AnnotationAssertion(Annotation( "FMA:258176") "dorsal white column of cervical segment of spinal cord") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005841") AnnotationAssertion(rdfs:label "cervical spinal cord dorsal column") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses(Annotation( "NIFSTD"^^xsd:string) ) # Class: (lumbar spinal cord dorsal column) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A subdivision of spinal cord dorsal column that is part of a lumbar spinal cord.") AnnotationAssertion( "BIRNLEX:834") AnnotationAssertion( "FMA:258180") AnnotationAssertion(Annotation( "FMA:258180") "dorsal funiculus of lumbar segment of spinal cord") AnnotationAssertion(Annotation( "FMA:258180") "dorsal white column of lumbar segment of spinal cord") AnnotationAssertion(Annotation( "FMA:258180") "lumbar segment of dorsal funiculus of spinal cord") AnnotationAssertion(Annotation( "FMA:258180") "lumbar segment of gracile fasciculus of spinal cord") AnnotationAssertion(Annotation( "BIRNLEX:834") "lumbar spinal cord posterior column") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005842") AnnotationAssertion(rdfs:label "lumbar spinal cord dorsal column") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses(Annotation( "NIFSTD"^^xsd:string) ) # Class: (sacral spinal cord) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A spinal cord segment that adjacent_to a sacral region.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:1275") AnnotationAssertion( "FMA:256623") AnnotationAssertion( "MA:0003085") AnnotationAssertion( "NCIT:C12896") AnnotationAssertion(Annotation( "BIRNLEX:1275") "UMLS:C0581669") AnnotationAssertion(Annotation( "ncithesaurus:Sacral_Spinal_Cord") "UMLS:C0581669") AnnotationAssertion(Annotation( "BIRNLEX:1275") "UMLS:C1280196") AnnotationAssertion(Annotation( "FMA:256623") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "pars sacralis medullae spinalis") AnnotationAssertion(Annotation( "FMA:256623") "sacral segment of spinal cord") AnnotationAssertion(Annotation( "FMA:256623") "sacral segments of spinal cord [1-5]") AnnotationAssertion(Annotation( "FMA:256623") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "segmenta sacralia medullae spinalis [1-5]") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005843") AnnotationAssertion(rdfs:label "sacral spinal cord") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (spinal cord segment) AnnotationAssertion( "This is currently used loosely to refer to cervical, lumbar, etc as well as the metamerically repeated segments, which may correspond more closely with the ZFA neuromere term") AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:2665") AnnotationAssertion( "FMA:62420") AnnotationAssertion( "MA:0003080") AnnotationAssertion(Annotation( "BIRNLEX:2665") "axial part of spinal cord") AnnotationAssertion(Annotation( "BIRNLEX:2665") "axial regional part of spinal cord") AnnotationAssertion(Annotation( "FMA:62420") "segment of spinal cord") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "TAO:0001332") Annotation( ) "spinal neuromeres") AnnotationAssertion( "UBERON:0005844") AnnotationAssertion(rdfs:label "spinal cord segment") SubClassOf( ) # Class: (caudal segment of spinal cord) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A spinal cord segment that adjacent_to a caudal region.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:256635") AnnotationAssertion( "MA:0003084") AnnotationAssertion(Annotation( "FMA:256635") "coccygeal segment of spinal cord") AnnotationAssertion(Annotation( "FMA:256635") "coccygeal segments of spinal cord [1-3]") AnnotationAssertion(Annotation( "FMA:256635") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "pars coccygea medullae spinalis") AnnotationAssertion(Annotation( "FMA:256635") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "segmenta coccygea medullae spinalis [1-3]") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:1656") Annotation( ) "segmenta coccygea") AnnotationAssertion( "UBERON:0005845") AnnotationAssertion(rdfs:comment "for spinal cord segments, we treat coccygeal/caudal as synonyms - we only differentiate where bone is concerned") AnnotationAssertion(rdfs:label "caudal segment of spinal cord") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (thoracic spinal cord lateral column) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A subdivision of spinal cord lateral column that is part of a thoracic spinal cord.") AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:1439") AnnotationAssertion(Annotation( "BIRNLEX:1439") "UMLS:C0228635") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005847") AnnotationAssertion(rdfs:label "thoracic spinal cord lateral column") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses(Annotation( "NIFSTD"^^xsd:string) ) # Class: (sacral spinal cord lateral column) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A subdivision of spinal cord lateral column that is part of a sacral spinal cord.") AnnotationAssertion( "BIRNLEX:1587") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005848") AnnotationAssertion(rdfs:label "sacral spinal cord lateral column") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses(Annotation( "NIFSTD"^^xsd:string) ) # Class: (cervical spinal cord lateral column) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A subdivision of spinal cord lateral column that is part of a cervical spinal cord.") AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:729") AnnotationAssertion(Annotation( "BIRNLEX:729") "UMLS:C0228618") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005849") AnnotationAssertion(rdfs:label "cervical spinal cord lateral column") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses(Annotation( "NIFSTD"^^xsd:string) ) # Class: (lumbar spinal cord lateral column) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A subdivision of spinal cord lateral column that is part of a lumbar spinal cord.") AnnotationAssertion( "BIRNLEX:828") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005850") AnnotationAssertion(rdfs:label "lumbar spinal cord lateral column") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses(Annotation( "NIFSTD"^^xsd:string) ) # Class: (thoracic spinal cord ventral column) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A subdivision of spinal cord ventral column that is part of a thoracic spinal cord.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:1448") AnnotationAssertion(Annotation( "BIRNLEX:1448") "UMLS:C0228636") AnnotationAssertion(Annotation( "BIRNLEX:1448") "UMLS:C1288556") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005852") AnnotationAssertion(rdfs:label "thoracic spinal cord ventral column") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses(Annotation( "NIFSTD"^^xsd:string) ) # Class: (sacral spinal cord ventral column) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A subdivision of spinal cord ventral column that is part of a sacral spinal cord.") AnnotationAssertion( "BIRNLEX:1520") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005853") AnnotationAssertion(rdfs:label "sacral spinal cord ventral column") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses(Annotation( "NIFSTD"^^xsd:string) ) # Class: (cervical spinal cord ventral column) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A subdivision of spinal cord ventral column that is part of a cervical spinal cord.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:1660") AnnotationAssertion(Annotation( "BIRNLEX:1660") "UMLS:C0228619") AnnotationAssertion(Annotation( "BIRNLEX:1660") "UMLS:C1278746") AnnotationAssertion(Annotation( "BIRNLEX:1660") "cervical spinal cord anterior column") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005854") AnnotationAssertion(rdfs:label "cervical spinal cord ventral column") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses(Annotation( "NIFSTD"^^xsd:string) ) # Class: (lumbar spinal cord ventral column) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A subdivision of spinal cord ventral column that is part of a lumbar spinal cord.") AnnotationAssertion( "BIRNLEX:840") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005855") AnnotationAssertion(rdfs:label "lumbar spinal cord ventral column") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses(Annotation( "NIFSTD"^^xsd:string) ) # Class: (developing mesenchymal condensation) AnnotationAssertion(Annotation( "AEO:0000148") "A delimited region of dense mesenchyme within looser mesenchyme.") AnnotationAssertion( "AEO:0000148") AnnotationAssertion( "EHDAA2_RETIRED:0003148") AnnotationAssertion( "EHDAA:8979") AnnotationAssertion(Annotation( "EMAPA:25351") "mesenchyme condensation") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005856") AnnotationAssertion(rdfs:label "developing mesenchymal condensation") SubClassOf(Annotation( "AEO"^^xsd:string) ) SubClassOf(Annotation( "cjm"^^xsd:string) ) SubClassOf(Annotation( "AEO-modified-relation") ObjectSomeValuesFrom( )) # Class: (cartilaginous condensation) AnnotationAssertion(Annotation( "GO:curator") "Cell condensation that is an aggregation of mesenchymal cells that are committed to differentiate into chondroblasts and chondrocytes.") AnnotationAssertion(Annotation( "VSAO") "isa cell condensation in VSAO; has_part chondroblast in AEO") AnnotationAssertion( "AEO:0000147") AnnotationAssertion( "EHDAA2_RETIRED:0003147") AnnotationAssertion( "EMAPA:32731") AnnotationAssertion( "VSAO:0000092") AnnotationAssertion( "XAO:0004022") AnnotationAssertion(Annotation( "EMAPA:25353") "cartilage condensation") AnnotationAssertion(Annotation( "EHDAA2:0003147") "cartilagenous condensation") AnnotationAssertion(Annotation( "VSAO:0000092") "chondrogenic condensation") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005863") AnnotationAssertion(rdfs:label "cartilaginous condensation") SubClassOf(Annotation( "AEO"^^xsd:string) ) SubClassOf(Annotation( "AEO"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pre-muscle condensation) AnnotationAssertion( "UBERON:0008714") AnnotationAssertion( "AEO:0000149") AnnotationAssertion( "EHDAA2_RETIRED:0003149") AnnotationAssertion( "pre muscle mass") AnnotationAssertion( "premuscle mass") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005865") AnnotationAssertion(rdfs:label "pre-muscle condensation") SubClassOf( ) SubClassOf(Annotation( "AEO"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pre-cartilage condensation) AnnotationAssertion(Annotation( "AEO:0000150") Annotation( "AEO:JB"^^xsd:string) "A delimited region of dense mesenchyme within looser mesenchyme whose cells are committed to become chondroblasts.") AnnotationAssertion(Annotation( ) "A closely packed aggregation of mesenchymal cells just prior to their differentiation into embryonic cartilage.") AnnotationAssertion( "AEO:0000150") AnnotationAssertion( "EHDAA2:0003150") AnnotationAssertion( "EMAPA:32736") AnnotationAssertion( "pre-chondrogenic condensation") AnnotationAssertion( "precartilage condensation") AnnotationAssertion( "precartilagenous condensation") AnnotationAssertion( "prechondrogenic condensation") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005866") AnnotationAssertion(rdfs:label "pre-cartilage condensation") SubClassOf( ) SubClassOf(Annotation( "AEO"^^xsd:string) ) SubClassOf(Annotation( "AEO"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (mandibular prominence) AnnotationAssertion(Annotation( "ISBN:0-683-40008-8"^^xsd:string) Annotation( "MP:0010939") "The paired ventral prominences formed by bifurcation of the first pharyngeal arches in the embryo; the two prominences unite ventrally and fuse to form the mandible and lower lip.") AnnotationAssertion( "check develops_from") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0001061") AnnotationAssertion( "EHDAA:5871") AnnotationAssertion( "EMAPA:17355") AnnotationAssertion( "FMA:293051") AnnotationAssertion( "NCIT:C34204") AnnotationAssertion(Annotation( "ncithesaurus:Mandibular_Prominence") "UMLS:C1512982") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "mandibular process") AnnotationAssertion(Annotation( ) "mandibular swelling") AnnotationAssertion(Annotation( ) Annotation( ) "prominentia mandibularis") AnnotationAssertion( "UBERON:0005867") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "mandibular prominence") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (maxillary prominence) AnnotationAssertion(Annotation( "ISBN:0-683-40008-8"^^xsd:string) Annotation( "MP:0010940") "The paired dorsal prominences formed by bifurcation of the first pharyngeal arches in the embryo that unite with the ipsilateral medial nasal process to form the upper jaw.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0001070") AnnotationAssertion( "EHDAA:5877") AnnotationAssertion( "EMAPA:17359") AnnotationAssertion( "FMA:293049") AnnotationAssertion( "NCIT:C34206") AnnotationAssertion(Annotation( "ncithesaurus:Maxillary_Prominence") "UMLS:C1513037") AnnotationAssertion( "embryonic maxillary process") AnnotationAssertion(Annotation( "EHDAA2:0001070") "maxillary process") AnnotationAssertion( "maxillary process of embryo") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "prominentia maxilaris") AnnotationAssertion( "UBERON:0005868") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "maxillary prominence") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/2/2d/Gray48.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses( ) # Class: (maxillary process of inferior nasal concha) AnnotationAssertion(Annotation( ) "From the lower border of the inferior nasal concha, a thin lamina, the maxillary process, curves downward and lateralward; it articulates with the maxilla and forms a part of the medial wall of the maxillary sinus.") AnnotationAssertion( ) AnnotationAssertion( "FMA:54741") AnnotationAssertion(Annotation( "FMA:54741") "maxillary process of inferior concha") AnnotationAssertion(Annotation( "FMA:54741") "maxillary process of inferior nasal turbinate") AnnotationAssertion(Annotation( "FMA:54741") "maxillary process of inferior turbinate") AnnotationAssertion(Annotation( "FMA:54741") "processus maxillaris (concha nasalis inferior)") AnnotationAssertion(Annotation( "FMA:54741") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "processus maxillaris conchae nasalis inferioris") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "p. maxillaris conchae nasalis inferioris") AnnotationAssertion( "UBERON:0005869") AnnotationAssertion(rdfs:label "maxillary process of inferior nasal concha") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/7/7c/Gray172.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (olfactory pit) AnnotationAssertion(Annotation( ) Annotation( "GO:0060166") "An indentation of the olfactory placode which ends when the pits hollows out to form the nasopharynx[GO].") AnnotationAssertion( "we represent the relationship as develops from, though in fact the pit is formed as an indentation in the placode") AnnotationAssertion(Annotation( ) "By the upgrowth of the surrounding parts the olfactory areas are converted into pits, the nasal pits or olfactory pits, which indent the fronto-nasal process and divide it into a medial and two lateral nasal processes[Wikipedia:Nasal_pit].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0011068") AnnotationAssertion( "EFO:0003496") AnnotationAssertion( "EHDAA2:0001295") AnnotationAssertion( "EHDAA:4772") AnnotationAssertion( "EMAPA:16800") AnnotationAssertion( "FMA:295840") AnnotationAssertion( "XAO:0000275") AnnotationAssertion( "XAO:0004073") AnnotationAssertion(Annotation( "XAO:0000275") "nasal pit") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005870") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "olfactory pit") SubClassOf(Annotation( "EHDAA2"^^xsd:string) ) SubClassOf(Annotation( "EMAPA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "XAO:0000275 nasal pit") ObjectSomeValuesFrom( )) # Class: (palatine process of maxilla) AnnotationAssertion(Annotation( ) "A thick, horizontal process of the maxilla. It forms the anterior three quarters of the hard palate, the horizontal plate of the palatine bone making up the rest.") AnnotationAssertion(Annotation( "AAO:0000413, AAO:LAP") "Lingual ledge on the inner surface of the maxilla.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0000413") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37932") AnnotationAssertion( "FMA:52896") AnnotationAssertion(Annotation( "AAO:0000413") "pars palatina of maxilla") AnnotationAssertion(Annotation( "FMA:52896") "processus palatinus (maxilla)") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "AAO:0000413") "lamina horizontalis") AnnotationAssertion(Annotation( ) "palatal process") AnnotationAssertion(Annotation( ) "palatine process") AnnotationAssertion(Annotation( ) Annotation( ) "processus palatinus maxillae") AnnotationAssertion(Annotation( ) Annotation( ) "processus palatinus ossis maxillae") AnnotationAssertion( "UBERON:0005871") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "palatine process of maxilla") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/4/4a/Gray160.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (1st arch pharyngeal cleft) AnnotationAssertion(Annotation( "ISBN:0124020607") Annotation( "VHOG:OG") "A groove that is situated between the 1st and 2nd pharyngeal arch.") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000969") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "DOI:10.1016/j.semcdb.2010.01.022 Grevellec A, Tucker AS, The pharyngeal pouches and clefts: development, evolution, structure and derivatives. Seminars in Cell and Developmental Biology (2010)") "In all jawed vertebrates the first arch forms the jaw, while the second arch forms the hyoid apparatus. These two arches are separated by the first pharyngeal pouch and cleft.[well established][VHOG]") AnnotationAssertion( "EHDAA2:0000009") AnnotationAssertion( "EHDAA:575") AnnotationAssertion( "EMAPA:16119") AnnotationAssertion( "VHOG:0000554") AnnotationAssertion( "VHOG:0000969") AnnotationAssertion(Annotation( "EHDAA2:0000008") "1st arch branchial groove") AnnotationAssertion(Annotation( "EHDAA2:0000009") "1st arch groove ectoderm") AnnotationAssertion(Annotation( "VHOG:0000969") "1st pharyngeal groove") AnnotationAssertion(Annotation( "VHOG:0000554") "1st pharyngeal groove ectoderm") AnnotationAssertion(Annotation( "EMAPA:16119") "branchial groove of 1st arch") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "EMAPA:16119") "1st branchial cleft") AnnotationAssertion(Annotation( "VHOG:0000969") "1st pharyngeal cleft") AnnotationAssertion( "UBERON:0005872") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "1st arch pharyngeal cleft") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) # Class: (2nd arch pharyngeal cleft) AnnotationAssertion(Annotation( "ISBN:0124020607") Annotation( "VHOG:OG") "A groove that is situated between the 2nd and 3rd pharyngeal arch.") AnnotationAssertion( "EHDAA2:0000057") AnnotationAssertion( "EHDAA:613") AnnotationAssertion( "EMAPA:16396") AnnotationAssertion( "VHOG:0000568") AnnotationAssertion( "VHOG:0000972") AnnotationAssertion(Annotation( "EHDAA2:0000054") "2nd arch branchial groove") AnnotationAssertion(Annotation( "EHDAA2:0000057") "2nd arch groove ectoderm") AnnotationAssertion(Annotation( "VHOG:0000972") "2nd pharyngeal groove") AnnotationAssertion(Annotation( "VHOG:0000568") "2nd pharyngeal groove ectoderm") AnnotationAssertion(Annotation( "EMAPA:16396") "branchial groove of 2nd arch") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "EMAPA:16396") "2nd branchial cleft") AnnotationAssertion(Annotation( "VHOG:0000972") "2nd pharyngeal cleft") AnnotationAssertion( "UBERON:0005873") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "2nd arch pharyngeal cleft") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) # Class: (3rd arch pharyngeal cleft) AnnotationAssertion(Annotation( "ISBN:0124020607") Annotation( "VHOG:OG") "A groove that is situated between the 3rd and 4th pharyngeal arch.") AnnotationAssertion( "EHDAA2:0000074") AnnotationAssertion( "EHDAA:1082") AnnotationAssertion( "EMAPA:16581") AnnotationAssertion( "VHOG:0000572") AnnotationAssertion( "VHOG:0000973") AnnotationAssertion(Annotation( "EHDAA2:0000071") "3rd arch branchial groove") AnnotationAssertion(Annotation( "EHDAA2:0000074") "3rd arch groove ectoderm") AnnotationAssertion(Annotation( "VHOG:0000973") "3rd pharyngeal groove") AnnotationAssertion(Annotation( "VHOG:0000572") "3rd pharyngeal groove ectoderm") AnnotationAssertion(Annotation( "EMAPA:16581") "branchial groove of 3rd arch") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "EMAPA:16581") "3rd branchial cleft") AnnotationAssertion(Annotation( "VHOG:0000973") "3rd pharyngeal cleft") AnnotationAssertion( "UBERON:0005874") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "3rd arch pharyngeal cleft") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) # Class: (4th arch pharyngeal cleft) AnnotationAssertion(Annotation( "ISBN:0124020607") Annotation( "VHOG:OG") "A groove that is situated between the 4th and 5th pharyngeal arch.") AnnotationAssertion( "EHDAA2:0000089") AnnotationAssertion( "EHDAA:1665") AnnotationAssertion( "EMAPA:16761") AnnotationAssertion( "EMAPA:16762") AnnotationAssertion( "RETIRED_EHDAA2:0000088") AnnotationAssertion( "VHOG:0000577") AnnotationAssertion( "VHOG:0000968") AnnotationAssertion(Annotation( "RETIRED_EHDAA2:0000088") "4th arch branchial groove") AnnotationAssertion(Annotation( "EHDAA2:0000089") "4th arch pharyngeal groove ectoderm") AnnotationAssertion(Annotation( "VHOG:0000968") "4th pharyngeal groove") AnnotationAssertion(Annotation( "VHOG:0000577") "4th pharyngeal groove ectoderm") AnnotationAssertion(Annotation( "EMAPA:16761") "branchial groove of 4th arch") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "EMAPA:16761") "4th branchial cleft") AnnotationAssertion(Annotation( "VHOG:0000968") "4th pharyngeal cleft") AnnotationAssertion( "UBERON:0005875") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "4th arch pharyngeal cleft") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) # Class: (undifferentiated genital tubercle) AnnotationAssertion(Annotation( ) Annotation( "MGI:anna"^^xsd:string) Annotation( "MP:0011771") "The embryonic anlage of the external genitalia, which emerges as paired swellings ventral to the cloacal membrane, is proposed to be derived from all three germ layers, and gives rise to the penis, clitoris, scrotum, labia, and foreskin.") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000583") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( ) "The eminence in the embryo which develops into the clitoris or penis. [TFD][VHOG]") AnnotationAssertion(Annotation( "MP") "embryonic anlage of the external genitalia, which emerges as paired swellings ventral to the cloacal membrane, is proposed to be derived from all three germ layers, and gives rise to the penis, clitoris, scrotum, labia, and foreskin; GT development is indistinguishable in male and female mouse embryos until ~E16, when the urethral plate begins to be masculinized to form the penile urethra, marking the beginning of an androgen-dependent phase of sexual differentiation[MP]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000583") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "DOI:10.1242/dev.036830 Seifert AW, Yamaguchi T, Cohn MJ, Functional and phylogenetic analysis shows that Fgf8 is a marker of genital induction in mammals but is not required for external genital development. Development (2009)") "In mammalian embryos, male and female external genitalia develop from the genital tubercle.[well established][VHOG]") AnnotationAssertion( "All amniotes studied to date initiate external genital development with the formation of paired genital swellings. In mammals, archosaurs, and turtles, these swellings merge to form a single genital tubercle, the precursor of the penis and clitoris[PMID:24960313]") AnnotationAssertion( "GT development is indistinguishable in male and female mouse embryos until approximately E16, when the urethral plate begins to be masculinized to form the penile urethra, marking the beginning of an androgen-dependent phase of sexual differentiation[MP:0011771]") AnnotationAssertion( "todo - add taxon constraints") AnnotationAssertion(Annotation( "EMAPA"^^xsd:string) "we assume the EMAPA class is the undifferentiated form based on TS timings") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0000705") AnnotationAssertion( "EHDAA:5925") AnnotationAssertion( "EMAPA:17382") AnnotationAssertion( "FMA:302888") AnnotationAssertion( "VHOG:0000583") AnnotationAssertion(Annotation( "VHOG:0000583") "undifferentiated genital tubercle") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "EMAPA:17382") "genital tubercle") AnnotationAssertion( "phallic tubercle") AnnotationAssertion(Annotation( ) Annotation( ) "tuberculum genitale") AnnotationAssertion(Annotation( ) Annotation( ) "tuberculum phallicum") AnnotationAssertion( "UBERON:0005876") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "undifferentiated genital tubercle") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/d/d6/Gray1119.png"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pharyngeal cleft) AnnotationAssertion(Annotation( ) Annotation( ) "An external pocketing of pharyngeal ectoderm that contacts a region of endoderm (a pharyngeal pouch) and interdigitates in the anterior and posterior directions by the pharyngeal arches.") AnnotationAssertion( "Note we use overlaps as the relationship to the arches") AnnotationAssertion(Annotation( "EMAPA"^^xsd:string) "EMAPA distinguishes between the groove ectoderm and epithelium, with the latter arising after the former") AnnotationAssertion(Annotation( ) "pharyngeal groove") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010623") AnnotationAssertion( "EMAPA:32750") AnnotationAssertion( "FMA:295672") AnnotationAssertion( "NCIT:C34250") AnnotationAssertion(Annotation( "ncithesaurus:Pharyngeal_Groove") "UMLS:C1280559") AnnotationAssertion(Annotation( ) "pharyngeal groove ectoderm") AnnotationAssertion( "gill cleft") AnnotationAssertion( "uberon") AnnotationAssertion( "Kiemenspalten") AnnotationAssertion(Annotation( ) "branchial cleft") AnnotationAssertion(Annotation( ) Annotation( "AAO:0010623") "branchial groove") AnnotationAssertion( "pharyngeal ectodermal cleft") AnnotationAssertion(Annotation( ) "pharyngeal slit") AnnotationAssertion(Annotation( ) Annotation( ) "sulcus pharyngei") AnnotationAssertion( "UBERON:0005879") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "pharyngeal cleft") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/2/20/Kiemenbogen.jpg"^^xsd:anyURI) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) SubClassOf( ObjectSomeValuesFrom( )) # Class: (prepollex) AnnotationAssertion(Annotation( ) "A rudimentary additional digit-like structure on the preaxial side of the thumb of certain amphibians and mammals[dictionary.com].") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0000852") Annotation( "AAO"^^xsd:string) Annotation( "AAO:LAP"^^xsd:string) "Two or more elements located ventral and medial to the metacarpal of digit II(I). The proximal prepollex is small and round whereas distal prepollex 1 is usually large and wedge-shaped. When more elements are present, they are smaller than previous elements.[AAO]") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "pseudothumb") AnnotationAssertion( "UBERON:0005880") AnnotationAssertion(rdfs:comment "not homologous to digit 1 of tetrapods. Note we treat the prepollex as distinct from the digits, which are not part of the carpus") AnnotationAssertion(rdfs:label "prepollex") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (autopodial extension) AnnotationAssertion(Annotation( ) "A subdivision of the autopod that corresponds to one or more bones arranged in series branching from the main limb axis.") AnnotationAssertion( "uberon") AnnotationAssertion( "digit or predigit") AnnotationAssertion( "limb outgrowth") AnnotationAssertion( "UBERON:0005881") AnnotationAssertion(rdfs:comment "encompasses digits and prepollex. requires review") AnnotationAssertion(rdfs:label "autopodial extension") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (neural tube alar plate) AnnotationAssertion(Annotation( ) Annotation( ) Annotation( "MP:0009692") "The mantle layer of the neural tube that lies dorsal to the sulcus limitans and contains primarily sensory neurons and interneurons involved in communication of sensory impulses.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "NeuroNames:1370") "alar plate") AnnotationAssertion( "alar plate of neural tube") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "alar lamina") AnnotationAssertion( "dorsal part of neural tube") AnnotationAssertion(Annotation( ) Annotation( ) "lamina alaris") AnnotationAssertion(Annotation( ) Annotation( ) "lamina dorsolateralis") AnnotationAssertion( "sensory part of neural tube") AnnotationAssertion( "UBERON:0005882") AnnotationAssertion(rdfs:label "neural tube alar plate") AnnotationAssertion(rdfs:seeAlso "https://github.com/obophenotype/uberon/issues/336"^^xsd:anyURI) AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/2/29/Gray646.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (neural tube lateral wall mantle layer) AnnotationAssertion( "TODO - expand subtypes post EHDAA2-revision, check lateral wall") AnnotationAssertion( "EHDAA2:0001261") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005883") AnnotationAssertion(rdfs:label "neural tube lateral wall mantle layer") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (hyoid arch skeleton) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A subdivision of skeleton that supports pharyngeal arch 2.") AnnotationAssertion(Annotation( "AAO"^^xsd:string) "it's not clear where AAO:'hyobranchial skeleton' belongs") AnnotationAssertion( "AAO:0000665") AnnotationAssertion( "AAO:0010370") AnnotationAssertion( "TAO:0001276") AnnotationAssertion( "XAO:0003177") AnnotationAssertion( "ZFA:0001276") AnnotationAssertion(Annotation( "ZFA:0001276") "hyoid arch skeleton") AnnotationAssertion(Annotation( "ZFA:0001276") "pharyngeal arch 2 skeleton") AnnotationAssertion(Annotation( "TAO:0001276") "hyoid bars") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "TAO:0001276") Annotation( ) "hyoid arch") AnnotationAssertion(Annotation( "TAO:0001276") Annotation( ) "visceral arch 2") AnnotationAssertion( "UBERON:0005884") AnnotationAssertion(rdfs:label "hyoid arch skeleton") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "ZFA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "cjm"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (post-hyoid pharyngeal arch skeleton) AnnotationAssertion(Annotation( ) "The part of the pharyngeal arch skeleton that excludes the skeleton of arches 1 and 2.") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0000095") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "Skeletal and cartilage elements of the gill arches; the last five of the set of seven pharyngeal arches; the numbering system can be confusing; generally branchial arch #1 is the first gill arch, or the third pharyngeal arch, but some authors do not follow this convention. Kimmel et al, 1995.[TAO]") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0000095") Annotation( "TAO"^^xsd:string) "relationship type change: subclass anatomical cluster (CARO:0000041) CHANGED TO: part_of anatomical cluster (UBERON:0000477)[TAO]") AnnotationAssertion(Annotation( "XAO"^^xsd:string) "XAO class belongs here, as it clearly refers to arches 3-7. In ZFA this is part_of the pharyngeal arches, but we retain this structure to refer to the embryonic structure") AnnotationAssertion( ) AnnotationAssertion( "TAO:0000095") AnnotationAssertion( "XAO:0003180") AnnotationAssertion( "ZFA:0000095") AnnotationAssertion(Annotation( "TAO:0000095") "gill arch 1-5 skeleton") AnnotationAssertion(Annotation( "ZFA:0000095") "pharyngeal arch 3-7 skeleton") AnnotationAssertion(Annotation( "ZFA:0000095") "gill arches 1-5 skeleton") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "XAO:0003180") Annotation( ) "branchial arch skeleton") AnnotationAssertion(Annotation( ) Annotation( "XAO:0003180") "gill arch skeleton") AnnotationAssertion(Annotation( "XAO:0003180") "pharyngeal arch skeleton 3-7") AnnotationAssertion(Annotation( "XAO:0003180") "visceral arch skeleton") AnnotationAssertion( "UBERON:0005886") AnnotationAssertion(rdfs:label "post-hyoid pharyngeal arch skeleton") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "ZFA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "ZFA-modified"^^xsd:string) ObjectSomeValuesFrom( )) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete zygote cortex) AnnotationAssertion( "AAO:0010327") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005889") AnnotationAssertion(rdfs:label "obsolete zygote cortex") AnnotationAssertion(rdfs:seeAlso "XAO:0000216") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (gonad germinal epithelium) AnnotationAssertion( "BTO:0004524") AnnotationAssertion( "EMAPA:17384") AnnotationAssertion( "EMAPA:27564") AnnotationAssertion( "EMAPA:35382") AnnotationAssertion( "EV:0200046") AnnotationAssertion( "RETIRED_EHDAA2:0000706") AnnotationAssertion( "VHOG:0000629") AnnotationAssertion(Annotation( "RETIRED_EHDAA2:0000706") "germinal epithelium") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "EMAPA:17384") "coelomic epithelium") AnnotationAssertion( "gonad coelomic epithelium") AnnotationAssertion(Annotation( "BTO:0004524") "surface epithelium") AnnotationAssertion( "UBERON:0005890") AnnotationAssertion(rdfs:label "gonad germinal epithelium") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (coelomic epithelium) AnnotationAssertion(Annotation( ) Annotation( "XAO:0000329") "The epithelial lining of the surface of the coelom.") AnnotationAssertion(Annotation( "EHDAA2"^^xsd:string) "EHDAA2:0004049 used to be called 'coelomic epithelium' but is now 'gonadal ridge mesothelium'") AnnotationAssertion( ) AnnotationAssertion( "XAO:0000329") AnnotationAssertion( "celomic epithelium") AnnotationAssertion(Annotation( ) "germinal epithelium of Waldeyer") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005891") AnnotationAssertion(rdfs:label "coelomic epithelium") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "XAO"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "XAO"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (mesonephric early distal tubule) AnnotationAssertion(Annotation( "XB:curator") "The mesonephric equivalent of the ascending limb, or straight distal segment, of metanephric nephrons.") AnnotationAssertion( "AAO:0010391") AnnotationAssertion( "XAO:0000333") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "XAO:0000333") "mesonephric ascending limb") AnnotationAssertion(Annotation( "XAO:0000333") "mesonephric straight distal segment") AnnotationAssertion(Annotation( "XAO:0000333") "straight distal segment") AnnotationAssertion( "UBERON:0005892") AnnotationAssertion(rdfs:label "mesonephric early distal tubule") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (leg bone) AnnotationAssertion(Annotation( ) "A bone that is part of the region of the hindlimb that includes the zeugopod and stylopod. Examples: patella, femur, tibia. Counter-examples: any pes phalanx.") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37304") AnnotationAssertion( "MA:0000670") AnnotationAssertion( "MESH:A02.835.232.500") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005893") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "leg bone") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete locomotive weight-bearing appendage) AnnotationAssertion(Annotation( ) Annotation( "GO:0035110") "OBSOLETE: A leg is a limb on which an animal walks and stands (GO:0035110).") AnnotationAssertion( "this class was originally introduced to support GO:0035110, but this has been obsoleted, because leg is a mechano-functional grouping") AnnotationAssertion( "UBERON:0000026") AnnotationAssertion( "Wikipedia:Leg") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "GO:0035110") "leg") AnnotationAssertion( "UBERON:0005894") AnnotationAssertion(rdfs:label "obsolete locomotive weight-bearing appendage") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete jointed/prehensile appendage) AnnotationAssertion(Annotation( ) Annotation( "GO:0035108") "A jointed or prehensible appendage used for locomotion or manipulation. Examples: human arm, human leg, octopus tentacle, insect limb[Wikipedia]. A limb is an appendage of an animal used for locomotion or grasping. For example a leg, arm or some types of fin[GO].") AnnotationAssertion( "this class was originally introduced to account for the previously vague use of the term 'limb' in GO.") AnnotationAssertion( "AEO:0000172") AnnotationAssertion( "Wikipedia:Limb_(anatomy)") AnnotationAssertion( "ncithesaurus:Extremities") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0001492") "extremitaet") AnnotationAssertion(Annotation( ) "extremities") AnnotationAssertion( "extremity") AnnotationAssertion(Annotation( "AEO:0000172") Annotation( "BTO:0001492") Annotation( "GO:0035108") "limb") AnnotationAssertion( "UBERON:0005896") AnnotationAssertion(rdfs:label "obsolete jointed/prehensile appendage") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (manus bone) AnnotationAssertion(Annotation( ) "A bone that is part of the manus skeleton. Note that this includes the carpal bones.") AnnotationAssertion( "https://github.com/obophenotype/uberon/wiki/Skeleton-partonomy-Design-Pattern"^^xsd:anyURI) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:35391") AnnotationAssertion( "MA:0000619") AnnotationAssertion( "bone of hand") AnnotationAssertion( "bone of hand skeleton") AnnotationAssertion( "bone of manus") AnnotationAssertion( "bone of pectoral limb autopod") AnnotationAssertion( "bone of pectoral limb autopodium") AnnotationAssertion( "forelimb autopod bone") AnnotationAssertion( "forelimb autopodium bone") AnnotationAssertion(Annotation( "MA:0000619") "hand bone") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005897") AnnotationAssertion(rdfs:label "manus bone") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pes bone) AnnotationAssertion(Annotation( ) "A bone that is part of the pes skeleton.") AnnotationAssertion( "https://github.com/obophenotype/uberon/wiki/Skeleton-partonomy-Design-Pattern"^^xsd:anyURI) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:35354") AnnotationAssertion( "GAID:192") AnnotationAssertion( "MA:0000643") AnnotationAssertion( "MESH:A02.835.232.300") AnnotationAssertion( "NCIT:C13068") AnnotationAssertion( "OpenCyc:Mx4rv5ridZwpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Foot_Bone") "UMLS:C0016505") AnnotationAssertion( "bone of foor proper or tarsal skeleton") AnnotationAssertion( "bone of foot") AnnotationAssertion( "bone of pedal skeleton") AnnotationAssertion( "bone of pes") AnnotationAssertion(Annotation( "MA:0000643") "foot bone") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005899") AnnotationAssertion(rdfs:label "pes bone") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (occipital region) AnnotationAssertion(Annotation( "TAO:0001414") Annotation( "UBERONREF:0000007") "Anatomical cluster that is located in the posterior region of the cranium and forms the margin of the foramen magnum and occipital condyles.") AnnotationAssertion( "TODO - check") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0010199") Annotation( "AAO"^^xsd:string) Annotation( "AAO:EJS"^^xsd:string) "An anatomical cluster that is located in the posterior region of the neurocranium and forms the margin of the foramen margin and occipital condyles.[AAO]") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0001414") Annotation( "TAO"^^xsd:string) Annotation( "TAO:MAH") "Anatomical cluster that is located in the posterior region of the cranium and forms the margin of the foramen magnum and occiptal condyle.[TAO]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010199") AnnotationAssertion( "BTO:0004675") AnnotationAssertion( "FMA:49187") AnnotationAssertion( "TAO:0001414") AnnotationAssertion( "XAO:0003173") AnnotationAssertion( "ZFA:0001414") AnnotationAssertion(Annotation( "ZFA:0001414") "basicranial region") AnnotationAssertion(Annotation( "FMA:49187") "occipital part of head") AnnotationAssertion(Annotation( "FMA:49187") "occipital region of head") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:49187") "back of head") AnnotationAssertion( "UBERON:0005902") AnnotationAssertion(rdfs:label "occipital region") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (duct of seminal vesicle) AnnotationAssertion(Annotation( ) "Each seminal vesicle consists of a single tube, coiled upon itself, and giving off several irregular cecal diverticula; the separate coils, as well as the diverticula, are connected together by fibrous tissue. When uncoiled, the tube is about the diameter of a quill, and varies in length from 10 to 15 cm.; it ends posteriorly in a cul-de-sac; its anterior extremity becomes constricted into a narrow straight duct called the excretory duct of seminal gland (or duct of the seminal vesicle), which joins with the corresponding ductus deferens to form the ejaculatory duct[WP].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:29282") AnnotationAssertion( "FMA:19473") AnnotationAssertion(Annotation( "FMA:19473") "ductus excretorius (vesicula seminalis)") AnnotationAssertion(Annotation( "FMA:19473") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "ductus excretorius glandulae vesiculosae") AnnotationAssertion(Annotation( "FMA:19473") "excretory duct of seminal gland") AnnotationAssertion(Annotation( "FMA:19473") "seminal vesicle duct") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "ductus excretorius glandulae vesiculosae") AnnotationAssertion( "UBERON:0005903") AnnotationAssertion(rdfs:label "duct of seminal vesicle") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/9/97/Gray1160.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (duct of male reproductive system) AnnotationAssertion(Annotation( ) "Any of the ducts that are part of a male reproductive system.") AnnotationAssertion( "this class groups the individual ducts in a variety of species") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005904") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "duct of male reproductive system") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (serous sac) AnnotationAssertion(Annotation( ) Annotation( "FMA:9689") "Organ with organ cavity, which has as parts a serous membrane and a serous cavity . Examples: pleural sac, pericardial sac, tendon sheath, bursa.[FMA].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:16060") AnnotationAssertion( "FMA:9689") AnnotationAssertion( "MA:0000005") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005906") AnnotationAssertion(rdfs:comment "See notes for serous membrane") AnnotationAssertion(rdfs:label "serous sac") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (conjunctival sac) AnnotationAssertion(Annotation( ) "A serous sac which is the aggregate of the conjunctiva plus the conjunctival space.") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:18233") AnnotationAssertion( "FMA:20291") AnnotationAssertion( "conjunctiva serous sac") AnnotationAssertion(Annotation( "NCBITaxon:8570") "subbrillar sac") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005908") AnnotationAssertion(rdfs:label "conjunctival sac") SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "HPO:pr") ObjectSomeValuesFrom( )) SubClassOf(Annotation( "MA") ObjectSomeValuesFrom( )) # Class: (obsolete transitional epithelium) AnnotationAssertion(Annotation( ) "See urothelium.") AnnotationAssertion(Annotation( "https://github.com/obophenotype/uberon/issues/92") "was merged with urothelium. MA uses the label 'urothelium' exclusively. FMA uses 'transitional epithelium' and has 'urothelium' as a sibling. FMA also lists 'urothelium' as the only example of 'transitional epithelium'. MP treats them differently") AnnotationAssertion( "UBERON:0000365") AnnotationAssertion( ) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005910") AnnotationAssertion(rdfs:label "obsolete transitional epithelium") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (endo-epithelium) AnnotationAssertion(Annotation( "FMA:69065") "Epithelium that derives from the endoderm. Examples: urothelium, transitional epithelium of ureter, epithelium of prostatic gland.[FMA].") AnnotationAssertion( "FMA:69065") AnnotationAssertion( "endoderm-derived epithelium") AnnotationAssertion( "endoepithelium") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005911") AnnotationAssertion(rdfs:label "endo-epithelium") SubClassOf( ) SubClassOf( ) # Class: (transitional epithelium of major calyx) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An urothelium of ureter that is part of a mucosa of major calyx.") AnnotationAssertion( "FMA:263266") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "urothelium of major calyx") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005912") AnnotationAssertion(rdfs:label "transitional epithelium of major calyx") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (zone of bone organ) AnnotationAssertion( "FMA:10483") AnnotationAssertion(Annotation( "FMA:10483") "bone organ zone") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005913") AnnotationAssertion(rdfs:label "zone of bone organ") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (supreme nasal concha) AnnotationAssertion(Annotation( ) "A thin bony plate occasionally found projecting from the inner wall of the ethmoid labyrinth, above the bony superior nasal concha, and the mucous membrane covering the plate.") AnnotationAssertion( ) AnnotationAssertion( "FMA:57457") AnnotationAssertion(Annotation( "FMA:57457") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "concha nasi suprema") AnnotationAssertion(Annotation( "FMA:57457") "highest nasal concha") AnnotationAssertion(Annotation( "FMA:57457") "supreme nasal turbinate") AnnotationAssertion(Annotation( "FMA:57457") "supreme turbinate") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005919") AnnotationAssertion(rdfs:label "supreme nasal concha") SubClassOf( ) # Class: (superior nasal concha) AnnotationAssertion(Annotation( ) "The back part of the medial surface of the labyrinth of ethmoid is subdivided by a narrow oblique fissure, the superior meatus of the nose, bounded above by a thin, curved plate, the superior nasal concha. The bone found in superior nasal concha is part of the ethmoid bone.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:57458") AnnotationAssertion(Annotation( "FMA:57458") "superior nasal turbinate") AnnotationAssertion(Annotation( "FMA:57458") "superior turbinate") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "superior concha") AnnotationAssertion( "UBERON:0005920") AnnotationAssertion(rdfs:label "superior nasal concha") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/e/e6/Gray151.png"^^xsd:anyURI) SubClassOf( ) # Class: (middle nasal concha) AnnotationAssertion(Annotation( ) "The medial surface of the labyrinth of ethmoid consists of a thin lamella, which descends from the under surface of the cribriform plate, and ends below in a free, convoluted margin, the middle nasal concha. It is rough, and marked above by numerous grooves, directed nearly vertically downward from the cribriform plate; they lodge branches of the olfactory nerves, which are distributed to the mucous membrane covering the superior nasal concha.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:57459") AnnotationAssertion(Annotation( "FMA:57459") "middle nasal turbinate") AnnotationAssertion(Annotation( "FMA:57459") "middle turbinate") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "middle concha") AnnotationAssertion( "UBERON:0005921") AnnotationAssertion(rdfs:label "middle nasal concha") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/e/e6/Gray151.png"^^xsd:anyURI) SubClassOf( ) # Class: (inferior nasal concha) AnnotationAssertion(Annotation( "UBERON:cjm"^^xsd:string) "A turbinal located on the maxilla bone.") AnnotationAssertion( "In many carnivores and ungulates, the maxilloturbinal is the most complex element immediately posterior to the vestibule[PMID:25312359]") AnnotationAssertion( "While the maxilloturbinates of mammals are located in the path of airflow to collect moisture, sensory turbinates in both mammals and reptiles are positioned farther back and above the nasal passage, away from the flow of air") AnnotationAssertion(Annotation( "FMA"^^xsd:string) "in FMA this is not classified with the other turbinates. In Uberon we subdivide the turbinates into the ethmoturbinates and the inferior turbinate. EDITOR NOTE: TODO check ethmoidal process of inferior nasal concha") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:54736") AnnotationAssertion( "NCIT:C32794") AnnotationAssertion(Annotation( "ncithesaurus:Inferior_Turbinate") "UMLS:C0225434") AnnotationAssertion(Annotation( "FMA:54736") "inferior nasal turbinate") AnnotationAssertion( "inferior nasal turbinate bone") AnnotationAssertion(Annotation( "FMA:54736") "inferior turbinate") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "concha nasalis inferior") AnnotationAssertion(Annotation( ) Annotation( ) "concha nasi inferior") AnnotationAssertion(Annotation( ) "inferior concha") AnnotationAssertion(Annotation( ) "inferior turbinated") AnnotationAssertion(Annotation( ) "maxilloturbinal") AnnotationAssertion( "UBERON:0005922") AnnotationAssertion(rdfs:label "inferior nasal concha") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/6/62/Gray192.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ) SubClassOf(Annotation( "FMA-abduced-lr"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "ISBN:1588903958") ObjectSomeValuesFrom( )) # Class: (ethmoidal process of inferior nasal concha) AnnotationAssertion(Annotation( ) "Behind the lacrimal process of the inferior nasal conchae lies a broad, thin plate, the ethmoidal process, which ascends to join the uncinate process of the ethmoid; from its lower border a thin lamina, the maxillary process, curves downward and lateralward; it articulates with the maxilla and forms a part of the medial wall of the maxillary sinus.") AnnotationAssertion( "In many carnivores and ungulates, the ethmoturbinals are most complex within a posterosuperior cul-de-sac, the olfactory recess[PMID:25312359]") AnnotationAssertion( ) AnnotationAssertion( "FMA:54742") AnnotationAssertion(Annotation( "FMA:54742") "ethmoidal process of inferior concha") AnnotationAssertion(Annotation( "FMA:54742") "ethmoidal process of inferior nasal turbinate") AnnotationAssertion(Annotation( "FMA:54742") "ethmoidal process of inferior turbinate") AnnotationAssertion(Annotation( "FMA:54742") "processus ethmoidalis (concha nasalis inferior)") AnnotationAssertion(Annotation( "FMA:54742") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "processus ethmoidalis conchae nasalis inferioris") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "UBERON:cjm"^^xsd:string) "ethmoturbinal") AnnotationAssertion(Annotation( ) Annotation( ) "processus ethmoidalis conchae nasalis inferioris") AnnotationAssertion( "UBERON:0005925") AnnotationAssertion(rdfs:label "ethmoidal process of inferior nasal concha") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (external naris) AnnotationAssertion(Annotation( ) Annotation( ) "A naris that provides one of the small external openings of the head that give passage to air for breathing.") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0000024") Annotation( "AAO"^^xsd:string) Annotation( "AAO:LAP"^^xsd:string) "Hole on the nasal capsule that connects the nasal cavity with the exterior.[AAO]") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0000024") Annotation( "AAO"^^xsd:string) "relationship loss: subclass nasal opening (AAO:0000316)[AAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000544") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0072528305 Kardong KV, Vertebrates: Comparative Anatomy, Function, Evolution (2006) p.257 and Figure 7.27") "In a tetrapod, the nasal sac has an external naris (homologous with the anterior naris of the fish) (...).[well established][VHOG]") AnnotationAssertion( "Fish have two pairs of external nostrils.") AnnotationAssertion(Annotation( "ZFA:0000550") "naris") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0000024") AnnotationAssertion( "AAO:0000983") AnnotationAssertion( "AAO:0010358") AnnotationAssertion( "EHDAA2:0001275") AnnotationAssertion( "EHDAA:9085") AnnotationAssertion( "EMAPA:17848") AnnotationAssertion( "FMA:59645") AnnotationAssertion( "MA:0001320") AnnotationAssertion( "NCIT:C33178") AnnotationAssertion( "OpenCyc:Mx4rvViCLpwpEbGdrcN5Y29ycA") AnnotationAssertion( "TAO:0000550") AnnotationAssertion(Annotation( "ncithesaurus:Nostril") "UMLS:C0595944") AnnotationAssertion( "VHOG:0000544") AnnotationAssertion( "XAO:0003033") AnnotationAssertion( "ZFA:0000550") AnnotationAssertion(Annotation( ) "external nares") AnnotationAssertion(Annotation( "FMA:59645") Annotation( "XAO:0003033") "nostril") AnnotationAssertion(Annotation( ) "blowhole") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "VHOG:0000544") Annotation( ) "anterior nares") AnnotationAssertion(Annotation( "ZFA:0001427") "anterior naris") AnnotationAssertion( "UBERON:0005928") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "external naris") SubClassOf( ) SubClassOf(Annotation( "ZFA"^^xsd:string) ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (primary choana) AnnotationAssertion(Annotation( ) "Initial opening of the nasal pits and olfactory sac of the embryo into the rostral part of the primordial oronasal cavity, before the formation of the secondary palate.") AnnotationAssertion( "TODO - check. MA says part_of external naris.") AnnotationAssertion( "EHDAA:9087") AnnotationAssertion( "EMAPA:17851") AnnotationAssertion( "FMA:295944") AnnotationAssertion( "MA:0001322") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005931") AnnotationAssertion(rdfs:label "primary choana") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (bulb of hair follicle) AnnotationAssertion(Annotation( ) "Thickening of the proximal end of the hair follicle. Contains rapidly proliferating, rather undifferentiated matrix cells (transient amplifying cells), melanocytes and outer root sheath cells.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:18770") AnnotationAssertion( "FMA:70666") AnnotationAssertion( "MA:0000161") AnnotationAssertion( "NCIT:C32706") AnnotationAssertion(Annotation( "ncithesaurus:Hair_Bulb") "UMLS:C0221962") AnnotationAssertion(Annotation( "FMA:70666") "hair bulb") AnnotationAssertion(Annotation( "FMA:70666") "hair follicle bulb") AnnotationAssertion(Annotation( "MA:0000161") Annotation( ) "coat hair bulb") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005932") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "bulb of hair follicle") AnnotationAssertion(rdfs:seeAlso "https://github.com/obophenotype/mouse-anatomy-ontology/issues/56"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (hair root sheath) AnnotationAssertion( "EMAPA:18772") AnnotationAssertion( "FMA:294628") AnnotationAssertion( "MA:0000162") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005933") AnnotationAssertion(rdfs:label "hair root sheath") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (hair inner root sheath) AnnotationAssertion(Annotation( ) Annotation( "MP:0010685") "A multilayered tube composed of terminally differentiated hair follicle keratinocytes that is surrounded by the outer root sheath; the layers of the inner root sheath include the companion layer, Henle's layer, Huxley's layer and the inner root sheath cuticle[MP].") AnnotationAssertion( "BTO:0003971") AnnotationAssertion( "EMAPA:32792") AnnotationAssertion( "FMA:70935") AnnotationAssertion( "MA:0000779") AnnotationAssertion(Annotation( "MP:0010685") "hair follicle inner root sheath") AnnotationAssertion(Annotation( "FMA:70935") "inner root sheath of hair follicle") AnnotationAssertion(Annotation( "FMA:70935") "inner sheath of hair follicle") AnnotationAssertion(Annotation( "FMA:70935") "internal root sheath of hair follicle") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0003971") "inner root sheath") AnnotationAssertion( "UBERON:0005941") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "hair inner root sheath") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (hair outer root sheath) AnnotationAssertion(Annotation( ) Annotation( ) Annotation( ) "A stratified epithelium that surrounds the hair follicle that merges proximally with the basal layer of the interfollicular epidermis and distally with the hair bulb.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0003969") AnnotationAssertion( "EMAPA:32793") AnnotationAssertion( "FMA:70943") AnnotationAssertion( "MA:0000780") AnnotationAssertion( "NCIT:C62490") AnnotationAssertion(Annotation( "FMA:70943") "external root sheath of hair follicle") AnnotationAssertion(Annotation( "BTO:0003969") "hair follicle outer root sheath") AnnotationAssertion(Annotation( "FMA:70943") "outer root sheath of hair follicle") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0003969") "ORS") AnnotationAssertion( "outer hair sheath") AnnotationAssertion(Annotation( "BTO:0003969") "outer root sheath") AnnotationAssertion( "UBERON:0005942") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "hair outer root sheath") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (hair root sheath matrix) AnnotationAssertion( "EMAPA:35390") AnnotationAssertion( "FMA:294634") AnnotationAssertion( "MA:0000781") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005943") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "hair root sheath matrix") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (axial skeleton plus cranial skeleton) AnnotationAssertion(Annotation( ) Annotation( ) Annotation( ) Annotation( "FMA:71221") Annotation( "VSAO:0000056") "Subdivision of skeleton which consists of cranial skeleton, set of all vertebrae, set of all ribs and sternum[FMA, modified].") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "VSAO:0000056") Annotation( "VSAO"^^xsd:string) Annotation( "PSPUB:0000170"^^xsd:string) "Skeletal subdivision of the central body axis including the cranium, vertebrae, notochord, ribs, and sternum.[VSAO]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0000963") AnnotationAssertion( "EMAPA:17214") AnnotationAssertion( "EMAPA:18043") AnnotationAssertion( "MA:0000308") AnnotationAssertion( "NCIT:C32172") AnnotationAssertion(Annotation( "ncithesaurus:Axial_Skeleton") "UMLS:C0222645") AnnotationAssertion( "VSAO:0000056") AnnotationAssertion( "XAO:0004011") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "skeleton axiale") AnnotationAssertion( "UBERON:0005944") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "axial skeleton plus cranial skeleton") AnnotationAssertion(rdfs:seeAlso "http://purl.obolibrary.org/obo/uberon/docs/The-axial-skeleton"^^xsd:anyURI) AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/8/8b/Axial_skeleton_diagram.svg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (neurocranial trabecula) AnnotationAssertion(Annotation( "ZFA:0001321") Annotation( ) "trabecula") AnnotationAssertion(Annotation( "ZFA:0001321") "trabecular cartilage") AnnotationAssertion( "EFO:0003677") AnnotationAssertion( "TAO:0001321") AnnotationAssertion( "ZFA:0001321") AnnotationAssertion(Annotation( "ZFA:0001321") Annotation( ) "neurocranial trabeculae") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005945") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "neurocranial trabecula") SubClassOf( ) SubClassOf(Annotation( "ZFA"^^xsd:string) ) SubClassOf( ) SubClassOf(Annotation( "ZFA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (outflow tract of atrium) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An outflow tract that is part of a cardiac atrium.") AnnotationAssertion( "FMA:14141") AnnotationAssertion(Annotation( "FMA:14141") "outflow part of atrium") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005946") AnnotationAssertion(rdfs:label "outflow tract of atrium") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (outflow part of right ventricle) AnnotationAssertion(Annotation( "MP:0010428") "Anteriosuperior, smooth-walled portion of the cavity of the right ventricle, beginning at the supraventricular crest and terminating in the pulmonary trunk.") AnnotationAssertion(Annotation( ) "infundibulum") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37926") AnnotationAssertion( "FMA:7216") AnnotationAssertion( "NCIT:C61368") AnnotationAssertion(Annotation( "ncithesaurus:Infundibulum") "UMLS:C1881209") AnnotationAssertion(Annotation( "MP:0010428") Annotation( ) "RVOT") AnnotationAssertion(Annotation( "FMA:7216") "conus arteriosus (infundibulum)") AnnotationAssertion(Annotation( "FMA:7216") "infundibulum of right ventricle") AnnotationAssertion(Annotation( "MP:0010428") "infundibulum of right ventricle") AnnotationAssertion(Annotation( "FMA:7216") "outflow tract of right ventricle") AnnotationAssertion(Annotation( "FMA:7216") "pulmonary conus") AnnotationAssertion(Annotation( "MP:0010428") "right ventricle pulmonary outflow tract") AnnotationAssertion(Annotation( "MP:0010428") "right ventricular outflow tract") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "MP:0010428") "arterial cone") AnnotationAssertion(Annotation( "MP:0010428") "conus arteriosus") AnnotationAssertion(Annotation( "MP:0010428") "pulmonary cone") AnnotationAssertion(Annotation( "MP:0010428") "pulmonary conus") AnnotationAssertion( "UBERON:0005953") AnnotationAssertion(rdfs:label "outflow part of right ventricle") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (outflow part of left ventricle) AnnotationAssertion(Annotation( "MP:0010429") "Anterosuperior fibrous portion of the left ventricle that connects to the ascending aorta.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37925") AnnotationAssertion( "FMA:9473") AnnotationAssertion(Annotation( "MP:0010429") Annotation( ) "LVOT") AnnotationAssertion(Annotation( "MP:0010429") "Sibson vestibule") AnnotationAssertion(Annotation( "FMA:9473") "aortic vestibule") AnnotationAssertion(Annotation( "MP:0010429") "aortic vestibule") AnnotationAssertion(Annotation( "MP:0010429") "heart left ventricle outflow tract") AnnotationAssertion(Annotation( "FMA:9473") "left ventricular outflow") AnnotationAssertion(Annotation( "HP:0011103") "left ventricular outflow tract") AnnotationAssertion(Annotation( "FMA:9473") "outflow tract of left ventricle") AnnotationAssertion(Annotation( "FMA:9473") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "vestibulum aortae") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005956") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "outflow part of left ventricle") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (outflow part of right atrium) AnnotationAssertion(Annotation( "FMA:9550") Annotation( "FMA:FMA"^^xsd:string) "Outflow part of atrium which consists of wall and cavity of the outflow part of right atrium and the tricuspid valve.[FMA].") AnnotationAssertion( "FMA:9550") AnnotationAssertion(Annotation( "FMA:9550") "main part of right atrium") AnnotationAssertion(Annotation( "FMA:9550") "outflow tract of right atrium") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005965") AnnotationAssertion(rdfs:label "outflow part of right atrium") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (outflow part of left atrium) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An outflow tract of atrium that is part of a left atrium.") AnnotationAssertion( "FMA:9551") AnnotationAssertion(Annotation( "FMA:9551") "main part of left atrium") AnnotationAssertion(Annotation( "FMA:9551") "outflow tract of left atrium") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005966") AnnotationAssertion(rdfs:label "outflow part of left atrium") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (conotruncal ridge) AnnotationAssertion(Annotation( ) Annotation( "MP:0010585") "One of the pair of spiral mesenchymal swellings in the primordial ventricular outflow tract, that eventually fuse to form the conotruncal septum, dividing the subvalvular outflow tract and contributing to the membranous interventricular septum[MP].") AnnotationAssertion( "EHDAA:1914") AnnotationAssertion( "EMAPA:17332") AnnotationAssertion( "RETIRED_EHDAA2:0000194") AnnotationAssertion( "VHOG:0001385") AnnotationAssertion(Annotation( "MP:0010585") "aortico-pulmonary spiral ridges") AnnotationAssertion(Annotation( "MP:0010585") "bulbar ridge") AnnotationAssertion(Annotation( "MP:0010585") "conotruncal cushion") AnnotationAssertion(Annotation( "MP:0010585") "endocardial ridge") AnnotationAssertion(Annotation( "MP:0010585") "outflow tract cushion") AnnotationAssertion(Annotation( "MP:0010585") "outflow tract endocardial cushion") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "VHOG:0001385") "spiral ridge") AnnotationAssertion( "UBERON:0005967") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "conotruncal ridge") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (infundibulum of hair follicle) AnnotationAssertion(Annotation( ) Annotation( ) Annotation( "ISBN:0123813611"^^xsd:string) "The portion of the hair follicle from the entrance of the sebaceous gland duct to the epidermal surface opening.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:70722") AnnotationAssertion( "MA:0003016") AnnotationAssertion( "NCIT:C32708") AnnotationAssertion(Annotation( "ncithesaurus:Hair_Follicle_Infundibulum") "UMLS:C0221973") AnnotationAssertion(Annotation( "FMA:70722") "dermal piliary canal") AnnotationAssertion(Annotation( "FMA:70722") "hair follicle infundibulum") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005968") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "infundibulum of hair follicle") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (eye trabecular meshwork) AnnotationAssertion(Annotation( ) Annotation( "MP:0005203") "A pore-like structure surrounding the entire circumference of the anterior chamber of the eye through which aqueous humor circulates[MP].") AnnotationAssertion( "TODO check syns - ligaments") AnnotationAssertion( "UBERON:0004028") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0001605") AnnotationAssertion( "CALOHA:TS-1058") AnnotationAssertion( "EFO:0003077") AnnotationAssertion( "EV:0100352") AnnotationAssertion( "FMA:77660") AnnotationAssertion( "GAID:897") AnnotationAssertion( "MA:0003086") AnnotationAssertion( "MESH:D014129") AnnotationAssertion( "NCIT:C12803") AnnotationAssertion(Annotation( "ncithesaurus:Trabecular_Meshwork") "UMLS:C0040573") AnnotationAssertion(Annotation( "MA:0003086") "eye trabecular meshwork") AnnotationAssertion(Annotation( "BTO:0001605") "reticulum trabeculare") AnnotationAssertion(Annotation( ) "trabecular meshwork of the eye") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0001605") "Hueck's ligament") AnnotationAssertion(Annotation( ) "cribiform ligament") AnnotationAssertion(Annotation( ) "iridis") AnnotationAssertion(Annotation( ) "ligamentum peactin-tum iridis") AnnotationAssertion(Annotation( ) "ligamentum pectinatum") AnnotationAssertion(Annotation( "BTO:0001605") "ligamentum pectinatum anguli iridocornealis") AnnotationAssertion(Annotation( ) "ligamentum pectinatum iridis") AnnotationAssertion(Annotation( "BTO:0001605") "pectinate ligament") AnnotationAssertion(Annotation( "BTO:0001605") "pectinate ligament of iris") AnnotationAssertion(Annotation( ) Annotation( ) "reticulum trabeculare sclerae") AnnotationAssertion(Annotation( ) "scleral trabeculae") AnnotationAssertion(Annotation( ) "scleral trabecular") AnnotationAssertion(Annotation( ) "scleral trabecule") AnnotationAssertion(Annotation( ) "scribiform ligament") AnnotationAssertion(Annotation( ) "trabecular mesh") AnnotationAssertion(Annotation( "BTO:0001605") Annotation( "GO:0002930") "trabecular meshwork") AnnotationAssertion( "UBERON:0005969") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "eye trabecular meshwork") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/2/22/Gray870.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses( ) # Class: (brain commissure) AnnotationAssertion(Annotation( ) Annotation( "ISBN:0-683-40008-8"^^xsd:string) Annotation( "MGI:csmith"^^xsd:string) Annotation( "MP:0002199") "Any of the nerve fiber tracts that span the longitudinal fissure between the cerebral and/or cerebellar hemispheres of the brain.") AnnotationAssertion(Annotation( "2012-08-08") Annotation( "MP:0002199") Annotation( "MP") "any of the nerve fiber tracts that span the longitudinal fissure between the cerebral and/or cerebellar hemispheres of the brain[MP]") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37446") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005970") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "brain commissure") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (amniotic fold) AnnotationAssertion(Annotation( "ISBN:0073040584"^^xsd:string) "A sheet of somatopleure that grows upward over the embryo and eventually meets in the midline enclosing the embryo, eventually giving rise to the amnion and chorion[Kardong].") AnnotationAssertion( "EMAPA:16076") AnnotationAssertion(Annotation( ) "amnionic fold") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005971") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "amniotic fold") SubClassOf( ) SubClassOf(Annotation( "ISBN:0073040584"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (tunnel of Corti) AnnotationAssertion(Annotation( "MP:0003151") "A triangular, fluid-filled space normally found between the inner and outer rows of supporting pillar cells in the organ of Corti.") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37976") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005972") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "tunnel of Corti") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (blood-inner ear barrier) AnnotationAssertion(Annotation( "MP:0004999") "The function of the group of barriers and transport systems which regulate the transport of various substances from blood to inner ear tissue and maintain the microhomeostasis and functional integrity of the inner ear; the endothelial cells of the inner ear blood capillaries, linked to each other by tight junctions, represent the main component of the blood-inner ear barrier.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005973") AnnotationAssertion(rdfs:label "blood-inner ear barrier") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (posterior cerebellomedullary cistern) AnnotationAssertion(Annotation( ) Annotation( "MP:0009036") "A space between the cerebellum and the dorsal surface of the medulla[MP]. The cisterna magna (or cerebellomedullary cistern) is one of three principal openings in the subarachnoid space between the arachnoid and pia mater layers of the meninges surrounding the brain. The openings are collectively referred to as cisterns. The cisterna magna is located between the cerebellum and the dorsal surface of the medulla oblongata. Cerebrospinal fluid produced in the fourth ventricle drains into the cisterna magna via the lateral apertures and median aperture. The two other principal cisterns are the pontine cistern located between the pons and the medulla, and the interpeduncular cistern located between the cerebral peduncles. Cerebral spinal fluid can also be obtained by puncture of the cisterna magna (cistern puncture).") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37816") AnnotationAssertion( "FMA:83721") AnnotationAssertion( "GAID:690") AnnotationAssertion( "MESH:D002946") AnnotationAssertion( "NCIT:C32324") AnnotationAssertion(Annotation( "ncithesaurus:Cisterna_Magna") "UMLS:C0008841") AnnotationAssertion(Annotation( "MP:0009033") "cisterna cerebellomedullaris posterior") AnnotationAssertion(Annotation( "MP:0009033") "cisterna magna") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "cisterna cerebellomedullaris") AnnotationAssertion( "UBERON:0005974") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "posterior cerebellomedullary cistern") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/3/36/Gray768.png"^^xsd:anyURI) SubClassOf( ) # Class: (hair follicle bulge) AnnotationAssertion(Annotation( "MP:0009759") "The area located in the bottom of the permanent portion of a resting (telogen) hair follicle where the cells of the external root sheath of the hair follicle are contiguous with the basal layer of the epidermis; this portion of the follicle is involved in the generation of a new hair at the onset of the hair growth cycle (anagen) and contains the hair follicle stem cells.") AnnotationAssertion( "add cell type to CL") AnnotationAssertion(Annotation( ) "Convex protrusion of the outer root sheath in the most distal permanent portion of the hair follicle, just below the sebaceous gland and at the insertion site of the muscle arrector pili. Contains the hair follicle stem cells.") AnnotationAssertion( "BTO:0004904") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37876") AnnotationAssertion( "FMA:70735") AnnotationAssertion(Annotation( "FMA:70735") "bulge of hair follicle") AnnotationAssertion(Annotation( ) "bulge") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005975") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "hair follicle bulge") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (ansiform lobule crus I) AnnotationAssertion( "synonym with hemispheric lobule VIIA based on FMA and NIFSTD") AnnotationAssertion( ) AnnotationAssertion( "BAMS:SSL") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37398") AnnotationAssertion( "FMA:72524") AnnotationAssertion( "HBA:12938") AnnotationAssertion( "MBA:1056") AnnotationAssertion( "NLXANAT:20081208") AnnotationAssertion(Annotation( "NLXANAT:20081208") "crus I of the ansiform lobule (HVII)") AnnotationAssertion(Annotation( "FMA:72524") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "crus primum lobuli ansiformis cerebelli [h vii a]") AnnotationAssertion(Annotation( "FMA:72524") "first crus of ansiform lobule of cerebellum [hVIIa]") AnnotationAssertion(Annotation( "NLXANAT:20081208") "hemispheric lobule VIIA") AnnotationAssertion(Annotation( "NLXANAT:20081208") "lobulus ansiform crus I") AnnotationAssertion(Annotation( "NLXANAT:20081208") "lobulus semilunaris superior") AnnotationAssertion(Annotation( "FMA:72524") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "lobulus semilunaris superior cerebelli") AnnotationAssertion(Annotation( "FMA:72524") "posterior superior lobule") AnnotationAssertion(Annotation( "FMA:72524") "semilunar lobule-2 (superior)") AnnotationAssertion(Annotation( "FMA:72524") "superior semilunar lobule") AnnotationAssertion(Annotation( "FMA:72524") "superior semilunar lobule of cerebellum") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "HBA:12938") Annotation( ) "Cb-Crus I") AnnotationAssertion(Annotation( "NeuroNames:667") "ansiform lobe of the cerebellum, crus 1") AnnotationAssertion(Annotation( "NeuroNames:667") "crus I") AnnotationAssertion(Annotation( "NeuroNames:667") Annotation( ) "crus I") AnnotationAssertion(Annotation( "NeuroNames:667") Annotation( ) "crus I (cerebelli)") AnnotationAssertion(Annotation( "NeuroNames:667") "crus I of the ansiform lobule") AnnotationAssertion(Annotation( "NeuroNames:667") Annotation( ) "lobulus posterior superior") AnnotationAssertion(Annotation( "NeuroNames:667") Annotation( ) "lobulus semilunaris cranialis") AnnotationAssertion(Annotation( "NeuroNames:667") Annotation( ) "lobulus semilunaris rostralis") AnnotationAssertion(Annotation( "NeuroNames:667") Annotation( ) "lobulus semilunaris superior") AnnotationAssertion(Annotation( "NeuroNames:667") "posterior superior lobule") AnnotationAssertion(Annotation( "NeuroNames:667") "semilunar lobule-2 (superior)") AnnotationAssertion(Annotation( "NeuroNames:667") "superior semilunar lobule") AnnotationAssertion( "UBERON:0005976") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "ansiform lobule crus I") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "HBA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (ansiform lobule crus II) AnnotationAssertion( "TODO - check") AnnotationAssertion( ) AnnotationAssertion( "BAMS:ISL") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37399") AnnotationAssertion( "FMA:72525") AnnotationAssertion( "HBA:12939") AnnotationAssertion( "MBA:1064") AnnotationAssertion( "NLXANAT:20081209") AnnotationAssertion(Annotation( "NLXANAT:20081209") "crus II of the ansiform lobule (HVII)") AnnotationAssertion(Annotation( "FMA:72525") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "crus secundum lobuli ansiformis cerebelli [hVII A]") AnnotationAssertion(Annotation( "NLXANAT:20081209") "hemispheric lobule VIIBi") AnnotationAssertion(Annotation( "FMA:72525") "inferior semilunar lobule") AnnotationAssertion(Annotation( "FMA:72525") "inferior semilunar lobule of cerebellum") AnnotationAssertion(Annotation( "NLXANAT:20081209") "lobulus ansiform crus II") AnnotationAssertion(Annotation( "NLXANAT:20081209") "lobulus semilunaris inferior") AnnotationAssertion(Annotation( "FMA:72525") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "lobulus semilunaris inferior cerebelli") AnnotationAssertion(Annotation( "FMA:72525") "posterior inferior lobule") AnnotationAssertion(Annotation( "FMA:72525") "second crus of ansiform lobule of cerebellum [hVIIa]") AnnotationAssertion(Annotation( "FMA:72525") "semilunar lobule-2 (inferior)") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "HBA:12939") Annotation( ) "Cb-Crus II") AnnotationAssertion(Annotation( "NeuroNames:668") "ansiform lobe of the cerebellum, crus 2") AnnotationAssertion(Annotation( "NeuroNames:668") "crus 2") AnnotationAssertion(Annotation( "NeuroNames:668") "crus 2 of the ansiform lobule") AnnotationAssertion(Annotation( "NeuroNames:668") Annotation( ) "crus II") AnnotationAssertion(Annotation( "NeuroNames:668") "inferior semilunar lobule") AnnotationAssertion(Annotation( "NeuroNames:668") Annotation( ) "lobulus posterior inferior") AnnotationAssertion(Annotation( "NeuroNames:668") Annotation( ) "lobulus semilunaris caudalis") AnnotationAssertion(Annotation( "NeuroNames:668") Annotation( ) "lobulus semilunaris inferior") AnnotationAssertion(Annotation( "NeuroNames:668") "posterior inferior lobule") AnnotationAssertion(Annotation( "NeuroNames:668") "semilunar lobule-2 (inferior)") AnnotationAssertion( "UBERON:0005977") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "ansiform lobule crus II") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "HBA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (olfactory bulb outer nerve layer) AnnotationAssertion(Annotation( "NLXANAT:1005010") "Superficial layer of the main olfactory bulb containing axons from the olfactory nerve and glial cells.") AnnotationAssertion(Annotation( "MP:0010057") "the outermost layer of the olfactory bulb; consists primarily of olfactory afferent axons and ensheathing glia") AnnotationAssertion( "UBERON:0015830") AnnotationAssertion( "DHBA:11326") AnnotationAssertion( "EMAPA:35614") AnnotationAssertion( "MA:0003191") AnnotationAssertion( "MBA:1016") AnnotationAssertion( "NLXANAT:1005010") AnnotationAssertion(Annotation( "NLXANAT:1005010") "olfactory bulb main olfactory nerve layer") AnnotationAssertion(Annotation( "MA:0003191") "olfactory bulb olfactory nerve layer") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005978") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "olfactory bulb outer nerve layer") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (crista terminalis) AnnotationAssertion(Annotation( "MP:0010495") "The vertical crest of the interior wall of the right atrium that lies to the right of the sinus of the vena cava and separates this from the remainder of the right atrium.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37837") AnnotationAssertion( "FMA:9236") AnnotationAssertion(Annotation( "FMA:9236") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "crista terminalis atrii dextri") AnnotationAssertion(Annotation( "FMA:9236") "crista terminalis cordis") AnnotationAssertion(Annotation( "FMA:9236") "crista terminalis of right atrium") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005979") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "crista terminalis") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pectinate muscle) AnnotationAssertion(Annotation( ) Annotation( "MP:0010496") "The prominent ridges of atrial myocardium located on the inner surface of most of the right atrium and both the right and left auricular regions[MP].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37935") AnnotationAssertion( "FMA:12226") AnnotationAssertion( "ZFA:0005809") AnnotationAssertion(Annotation( ) Annotation( ) "musculi pectinati") AnnotationAssertion(Annotation( "FMA:12226") Annotation( ) "musculus pectinatus") AnnotationAssertion(Annotation( ) Annotation( ) "musculi pectinati atrii dextri") AnnotationAssertion(Annotation( ) Annotation( ) "musculi pectinati atrii sinistri") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "musculi pectinati atrii") AnnotationAssertion(Annotation( "ZFA:0005809") Annotation( ) "pectinate muscles") AnnotationAssertion( "UBERON:0005980") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "pectinate muscle") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/9/96/Gray498.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (vena cava sinus) AnnotationAssertion(Annotation( "MP:0010497") "The portion of the cavity of the right atrium of the heart that receives the blood from the vena cavae and is separated from the rest of the atrium by the crista terminalis.") AnnotationAssertion( "FMA:13246") AnnotationAssertion(Annotation( "FMA:13246") "cavity of inflow part of right atrium") AnnotationAssertion(Annotation( "FMA:13246") "posterior right atrial cavity") AnnotationAssertion(Annotation( "FMA:13246") "sinus venarum cavarum") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005981") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "vena cava sinus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (Bachmann's bundle) AnnotationAssertion(Annotation( ) Annotation( "MP:0010517") "The impulse conduction tract that originates in the sinoatrial node and transmits signal to the left atrium.") AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37435") AnnotationAssertion( "FMA:83180") AnnotationAssertion(Annotation( "UBERON:gg") "anterior interatrial band") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005982") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "Bachmann's bundle") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/0/05/ConductionsystemoftheheartwithouttheHeart.png"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "cjm"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (heart layer) AnnotationAssertion(Annotation( "MP:0010545") "The laminar structure of the heart.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005983") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "heart layer") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (subendocardium layer) AnnotationAssertion(Annotation( "MP:0010546") "The layer of loose fibrous tissue located between the endocardium and myocardium which contains the nerves and the impulse-conducting system (Purkinje fibers) of the heart.") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37968") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005984") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "subendocardium layer") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (coronary vessel) AnnotationAssertion(Annotation( "MP:0010551") "Any of the arteries or veins that supply blood to the heart or return blood from the heart muscles to the circulation.") AnnotationAssertion( "TODO - change relation from part_of") AnnotationAssertion( ) AnnotationAssertion( "MESH:D003331") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005985") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "coronary vessel") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (left bundle branch) AnnotationAssertion(Annotation( "MP:0010566") "The left branch of the atrioventricular bundle that separates at the bundle of His, descends the septal wall of the left ventricle and connects to the terminal Purkinje fiber[MP].") AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37358") AnnotationAssertion( "FMA:9487") AnnotationAssertion( "galen:LeftBundleBranch") AnnotationAssertion(Annotation( ) "LBB") AnnotationAssertion(Annotation( "FMA:9487") "crus sinistrum (fasciculi atrioventricularis)") AnnotationAssertion(Annotation( "FMA:9487") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "crus sinistrum fasciculi atrioventricularis") AnnotationAssertion( "left branch of atrioventricular bundle") AnnotationAssertion(Annotation( "MP:0010566") "left bundle branch") AnnotationAssertion(Annotation( "HP:0005172") "left bundle branch of bundle of His") AnnotationAssertion(Annotation( "MP:0010566") "left bundle of atrioventricular bundle") AnnotationAssertion(Annotation( "MP:0010566") "left crus of atrioventricular bundle") AnnotationAssertion(Annotation( "MP:0010566") "left posterior branch") AnnotationAssertion(Annotation( "MP:0010566") "left posterior bundle") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005986") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "left bundle branch") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (right bundle branch) AnnotationAssertion(Annotation( "MP:0010567") "The right branch of the atrioventricular bundle that separates just below the bundle of His, descends the septal wall of the right ventricle and connects to the terminal Purkinje fibers[MP].") AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37359") AnnotationAssertion( "FMA:9486") AnnotationAssertion( "galen:RightBundleBranch") AnnotationAssertion(Annotation( ) "RBB") AnnotationAssertion(Annotation( "FMA:9486") "crus dextrum (fasciculi atrioventricularis)") AnnotationAssertion(Annotation( "FMA:9486") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "crus dextrum fasciculi atrioventricularis") AnnotationAssertion( "right branch of atrioventricular bundle") AnnotationAssertion(Annotation( "FMA:9486") Annotation( "MP:0010567") "right bundle") AnnotationAssertion(Annotation( "FMA:9486") "right bundle branch") AnnotationAssertion( "right bundle branch of bundle of His") AnnotationAssertion(Annotation( "MP:0010567") "right right crus of atrioventricular bundle") AnnotationAssertion(Annotation( "MP:0010567") "right ventricular bundle") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005987") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "right bundle branch") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (atrium myocardial trabecula) AnnotationAssertion(Annotation( "MP:0010581") Annotation( "ZFA:0005810") "The supporting bundles of muscular fibers lining the walls of the atrial myocardium.") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37432") AnnotationAssertion( "ZFA:0005810") AnnotationAssertion( "atrial trabecula") AnnotationAssertion(Annotation( "MP:0010581") Annotation( ) "atrium myocardial trabeculae") AnnotationAssertion( "trabecula of atrium") AnnotationAssertion( "trabecular layer of atrium") AnnotationAssertion(Annotation( "ZFA:0005810") "trabecular layer of the atrium") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005988") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "atrium myocardial trabecula") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "ZFA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (atrioventricular septum) AnnotationAssertion(Annotation( "MP:0010592") "The wall of the heart that separates the right atrium and left ventricle; and is located just above the septal cusp of the tricuspid valve.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37431") AnnotationAssertion( "FMA:7136") AnnotationAssertion(Annotation( "FMA:7136") "membranous atrioventricular septum") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005989") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "atrioventricular septum") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (aortic valve cusp) AnnotationAssertion(Annotation( "MP:0010595") "The three fibrous triangular components and associated flap of the aortic valve.") AnnotationAssertion( ) AnnotationAssertion( "FMA:7251") AnnotationAssertion(Annotation( "FMA:7251") "aortic semilunar valvule") AnnotationAssertion(Annotation( "FMA:7251") "aortic valvular cusp") AnnotationAssertion(Annotation( "FMA:7251") "cusp of aortic valve") AnnotationAssertion(Annotation( "FMA:7251") "semilunar valvule of aortic valve") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005990") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "aortic valve cusp") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (aortic valve anulus) AnnotationAssertion(Annotation( "MP:0010598") "The fibrous ring of the aortic valve that attaches the cusps of aortic valve to the wall of left ventricle, and which consists of portions of the fibrous scallops of the posterior, right anterior and left anterior cusps.") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37418") AnnotationAssertion( "FMA:9502") AnnotationAssertion(Annotation( "FMA:9502") "anulus of aortic valve") AnnotationAssertion(Annotation( "FMA:9502") "aortic anulus") AnnotationAssertion(Annotation( "FMA:9502") "aortic valvar anulus") AnnotationAssertion(Annotation( "FMA:9502") "fibrous ring of aortic valve") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005991") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "aortic valve anulus") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pulmonary valve cusp) AnnotationAssertion(Annotation( "MP:0010602") "The three fibrous triangular components and associated flap of the pulmonary valve.") AnnotationAssertion( "FMA:7248") AnnotationAssertion(Annotation( "FMA:7248") "cusp of pulmonary valve") AnnotationAssertion(Annotation( "FMA:7248") "pulmonary semilunar valvule") AnnotationAssertion(Annotation( "FMA:7248") "pulmonary valvular cusp") AnnotationAssertion(Annotation( "FMA:7248") "semilunar cusp of pulmonary valve") AnnotationAssertion(Annotation( "FMA:7248") "semilunar valvule of pulmonary valve") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005992") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "pulmonary valve cusp") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pulmonary valve anulus) AnnotationAssertion(Annotation( "MP:0010606") "The fibrous ring of the pulmonary valve that attaches the cusps of pulmonary valve to the wall of right ventricle, and which consists of portions of the fibrous scallops of the anterior, right posterior and left posterior cusps.") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37420") AnnotationAssertion( "FMA:9503") AnnotationAssertion(Annotation( "FMA:9503") "anulus of pulmonary valve") AnnotationAssertion(Annotation( "FMA:9503") "fibrous ring of pulmonary valve") AnnotationAssertion(Annotation( "FMA:9503") "pulmonary anulus") AnnotationAssertion(Annotation( "FMA:9503") "pulmonary valvar anulus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005993") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "pulmonary valve anulus") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (chorda tendineae) AnnotationAssertion(Annotation( ) Annotation( "MP:0010608") "The tendinous strands that connect the papillary muscles on the wall of the ventricles to the leaflets of the atrioventricular valves; the chordae tendineae serve to prevent the AV valves from prolapsing back into the atria.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:36322") AnnotationAssertion( "FMA:12225") AnnotationAssertion( "GAID:564") AnnotationAssertion( "MESH:D002815") AnnotationAssertion( "NCIT:C32307") AnnotationAssertion(Annotation( "ncithesaurus:Chordae_Tendineae") "UMLS:C0008484") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:12225") Annotation( ) "chordae tendinea") AnnotationAssertion(Annotation( ) Annotation( ) "chordae tendineae cordis") AnnotationAssertion( "UBERON:0005994") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "chorda tendineae") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/6/6c/Gray493.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA-abduced") ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (mitral valve anulus) AnnotationAssertion(Annotation( "MP:0010613") "The fibrous ring of the mitral valve that attaches the cusps of mitral valve to the heart, and which consists of portions of the fibrous scallops of the anterior and posterior cusps.") AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37419") AnnotationAssertion( "FMA:9498") AnnotationAssertion(Annotation( "FMA:9498") "anulus of mitral valve") AnnotationAssertion(Annotation( "FMA:9498") "fibrous ring of mitral valve") AnnotationAssertion(Annotation( ) "mitral annulus") AnnotationAssertion(Annotation( "FMA:9498") "mitral anulus") AnnotationAssertion(Annotation( "FMA:9498") "mitral valvar anulus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005995") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "mitral valve anulus") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (mitral valve cusp) AnnotationAssertion(Annotation( "MP:0010614") "The two fibrous components and associated flaps of the mitral valve.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005996") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "mitral valve cusp") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (tricuspid valve anulus) AnnotationAssertion(Annotation( "MP:0010621") "The fibrous ring of the tricuspid valve that attaches the cusps of tricuspid valve to the heart, and which consists of portions of the fibrous scallops of the anterior cusp (infundibular cusp), the posterior cusp (marginal cusp), and the septal cusp (medial cusp).") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37421") AnnotationAssertion( "FMA:9500") AnnotationAssertion(Annotation( "FMA:9500") "anulus of tricuspid valve") AnnotationAssertion(Annotation( "FMA:9500") "fibrous ring of tricuspid valve") AnnotationAssertion(Annotation( "FMA:9500") "tricuspid anulus") AnnotationAssertion(Annotation( "FMA:9500") "tricuspid valvar anulus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005997") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "tricuspid valve anulus") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (tricuspid valve cusp) AnnotationAssertion(Annotation( "MP:0010622") "The three fibrous triangular components and associated flaps of the tricuspid valve.") AnnotationAssertion( "check whether we need to separate cusp/leaflet/valve") AnnotationAssertion( ) AnnotationAssertion( "FMA:7240") AnnotationAssertion(Annotation( "FMA:7240") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "cuspis septalis (valva tricuspidalis)") AnnotationAssertion(Annotation( "FMA:7240") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "cuspis septalis valvae atrioventricularis dextrae") AnnotationAssertion(Annotation( "FMA:7240") "septal cusp of right atrioventricular valve") AnnotationAssertion(Annotation( "FMA:7240") "septal cusp of tricuspid valve") AnnotationAssertion(Annotation( "BGEE:ANiknejad") "septal leaflet of right-sided tricuspid valve") AnnotationAssertion(Annotation( "FMA:7240") "septal leaflet of tricuspid valve") AnnotationAssertion(Annotation( "FMA:7240") "septal tricuspid leaflet") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0005998") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "tricuspid valve cusp") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (vitelline artery) AnnotationAssertion(Annotation( ) Annotation( "MP:0010664") "The paired arteries that carry blood to the yolk sac from the dorsal aorta.") AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0002208") AnnotationAssertion( "EMAPA:16207") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006002") AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "Development notes:; the vitelline arteries give rise to the celiac artery, superior mesenteric artery, and inferior mesenteric artery in the adult[MP:0010664]") AnnotationAssertion(rdfs:label "vitelline artery") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/5/55/Gray31.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "ventral branch") ObjectSomeValuesFrom( )) # Class: (integumentary adnexa) AnnotationAssertion(Annotation( ) Annotation( ) "Anatomical structure embedded in or located in the integument that is part of the integumental system. Examples: hair, follicles, skin glands, claws, nails, feathers.") AnnotationAssertion( "add subclasses based on resolution of CARO tracker item. Also check: adnexal gland. Note that MP implicitly includes hypodermis.") AnnotationAssertion(Annotation( "MP:0010678") "the tissue or structures associated with or embedded in the skin such as hair and hair follicles, sweat glands, sebaceous glands and claws or nails[MP:0010678]") AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37883") AnnotationAssertion(Annotation( "GO:GO") "body hair or bristle") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "adnexae cutis") AnnotationAssertion(Annotation( ) "skin adnexa") AnnotationAssertion( "skin adnexal structure") AnnotationAssertion(Annotation( ) "skin appendage") AnnotationAssertion( "UBERON:0006003") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "integumentary adnexa") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (hair follicle matrix region) AnnotationAssertion(Annotation( "MP:0010686") "The bulb region adjacent to the dermal papilla that contains rapidly proliferating matrix cells that give rise to the various cell lineages of the hair shaft and inner root sheath.") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37878") AnnotationAssertion( "FMA:70772") AnnotationAssertion(Annotation( "FMA:70772") "germinal matrix of hair bulb") AnnotationAssertion(Annotation( "FMA:70772") "lower part of bulb of hair follicle") AnnotationAssertion(Annotation( "FMA:70772") "lower zone of bulb of hair follicle") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006004") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "hair follicle matrix region") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (hair follicle isthmus) AnnotationAssertion(Annotation( ) Annotation( "MP:0010694") "The middle part of the hair follicle that extends from the sebaceous duct to the bulge.") AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37877") AnnotationAssertion( "FMA:70723") AnnotationAssertion( "NCIT:C32709") AnnotationAssertion(Annotation( "ncithesaurus:Hair_Follicle_Isthmus") "UMLS:C1182701") AnnotationAssertion(Annotation( "FMA:70723") "isthmus of hair follicle") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006005") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "hair follicle isthmus") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (metoptic pillar) AnnotationAssertion(Annotation( "MP:0010705") "The posterior border of the optic nerve foramen.") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37908") AnnotationAssertion(Annotation( "ISBN:978-0226870137") "postoptic pillar") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006006") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "metoptic pillar") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pre-Botzinger complex) AnnotationAssertion(Annotation( "MP:0010745") "The group of interneurons within the medulla oblongata's ventral respiratory group that are important for the generation of ventilatory (inspiratory) rhythmogenesis[MP].") AnnotationAssertion( ) AnnotationAssertion( "BAMS:PrBo") AnnotationAssertion( "DHBA:12659") AnnotationAssertion( "EMAPA:36557") AnnotationAssertion( "MA:0002577") AnnotationAssertion(Annotation( ) "Pre-Bötzinger complex") AnnotationAssertion(Annotation( ) "preBötC") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "MA:0002577") "pre-botzinger respiratory control center") AnnotationAssertion( "UBERON:0006007") AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "the MP class implies this is part of both the medulla oblongata and the PSNS, which violates the spatial disjointness constraint. We weaken this to continuous_with here.") AnnotationAssertion(rdfs:label "pre-Botzinger complex") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (fibrous ring of heart) AnnotationAssertion(Annotation( ) Annotation( ) "A ring of ribrous tissue that surrounds the atrioventricular and arterial orifices.") AnnotationAssertion( "TODO - compare with ZFA atrioventricular ring, part of the conduction system") AnnotationAssertion( ) AnnotationAssertion( "BTO:0003628") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37422") AnnotationAssertion( "FMA:9497") AnnotationAssertion(Annotation( "FMA:9497") "anulus fibrosus of heart") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0003628") "Lower's ring") AnnotationAssertion(Annotation( ) Annotation( ) "annulus fibrosus cordis") AnnotationAssertion(Annotation( ) "anulus fibrosus cordis") AnnotationAssertion(Annotation( ) "aortic annulus") AnnotationAssertion(Annotation( "BTO:0003628") "atrioventricular ring") AnnotationAssertion(Annotation( "BTO:0003628") "coronary tendon") AnnotationAssertion(Annotation( ) "fibrous ring of heart") AnnotationAssertion( "UBERON:0006008") AnnotationAssertion(rdfs:label "fibrous ring of heart") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (cusp of cardiac valve) AnnotationAssertion(Annotation( ) "The part of the heart valves that serves to seal the heart valves when closed. There are three cusps for each valve except for the mitral valve, which has only two (hence its alternate name, 'bicuspid valve'). 'Nodules' are located at the tip of the valve, to form a tighter seal[WP].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:7232") AnnotationAssertion( "NCIT:C33849") AnnotationAssertion(Annotation( "ncithesaurus:Cardiac_Valve_Cusp") "UMLS:C0225923") AnnotationAssertion(Annotation( "FMA:7232") "cardiac valve cusp") AnnotationAssertion(Annotation( "FMA:7232") "cardiac valvular cusp") AnnotationAssertion(Annotation( "FMA:7232") "cardiac valvule") AnnotationAssertion( "cardial valve cusp") AnnotationAssertion(Annotation( "FMA:7232") "semilunar valvule") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006009") AnnotationAssertion(rdfs:label "cusp of cardiac valve") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/5/50/Gray495.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (hyaloid canal) AnnotationAssertion(Annotation( ) "A small transparent canal running through the vitreous body from the optical nerve disc to the lens. It is formed by an invagination of the hyaloid, a membrane which encloses the vitreous body[WP].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:58837") AnnotationAssertion(Annotation( ) Annotation( "FMA:58837") "Cloquet's canal") AnnotationAssertion(Annotation( ) Annotation( "FMA:58837") "Stilling's canal") AnnotationAssertion(Annotation( "FMA:58837") "canal of Cloquet") AnnotationAssertion(Annotation( ) Annotation( ) "canalis hyaloideus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006010") AnnotationAssertion(rdfs:label "hyaloid canal") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/e/eb/Gray869.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "Wikipedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (hyaloid vein) AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0005047") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "Vein internal to the eye. Isogai et al. 2001.[TAO]") AnnotationAssertion( "EHDAA2:0000791") AnnotationAssertion( "TAO:0005047") AnnotationAssertion( "XAO:0004156") AnnotationAssertion( "ZFA:0005047") AnnotationAssertion(Annotation( "ZFA:0005047") Annotation( ) "hyaloid veins") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006011") AnnotationAssertion(rdfs:label "hyaloid vein") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (interdigital region) AnnotationAssertion(Annotation( "UBERON:cjm"^^xsd:string) "Anatomical region connecting two digits.") AnnotationAssertion(Annotation( "MA"^^xsd:string) "MA and EMAPA mapping from TH") AnnotationAssertion( "BTO:0004670") AnnotationAssertion( "EMAPA:32618") AnnotationAssertion( "MA:0003012") AnnotationAssertion( "XAO:0004316") AnnotationAssertion( "interdigit region") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0004670") "interdigit") AnnotationAssertion( "UBERON:0006012") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "interdigital region") SubClassOf( ) SubClassOf( ObjectIntersectionOf(ObjectMinCardinality(2 ) ObjectMaxCardinality(2 ))) SubClassOf( ObjectSomeValuesFrom( )) # Class: (interdigital region between manual digits) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An interdigital region that is part of a manus.") AnnotationAssertion( "EMAPA:32651") AnnotationAssertion( "MA:0000627") AnnotationAssertion( "VHOG:0000991") AnnotationAssertion(Annotation( "MA:0000627") "hand interdigit region") AnnotationAssertion(Annotation( "VHOG:0000991") "hand interdigital region") AnnotationAssertion( "interdigital region of manus") AnnotationAssertion( "manual interdigital region") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006013") AnnotationAssertion(rdfs:label "interdigital region between manual digits") SubClassOf( ) SubClassOf( ObjectIntersectionOf(ObjectMinCardinality(2 ) ObjectMaxCardinality(2 ))) SubClassOf( ObjectSomeValuesFrom( )) # Class: (interdigital region between pedal digits) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An interdigital region that is part of a pes.") AnnotationAssertion( "EMAPA:32945") AnnotationAssertion( "MA:0000651") AnnotationAssertion( "VHOG:0000992") AnnotationAssertion(Annotation( "MA:0000651") "foot interdigit region") AnnotationAssertion(Annotation( "VHOG:0000992") "foot interdigital region") AnnotationAssertion( "interdigit region of pes") AnnotationAssertion( "pedal interdigit region") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006014") AnnotationAssertion(rdfs:label "interdigital region between pedal digits") SubClassOf( ) SubClassOf( ObjectIntersectionOf(ObjectMinCardinality(2 ) ObjectMaxCardinality(2 ))) SubClassOf( ObjectSomeValuesFrom( )) # Class: (webbed interdigital region) AnnotationAssertion(Annotation( ) "A membranous region of skin between the digits.") AnnotationAssertion(Annotation( "WP"^^xsd:string) "Normally in mammals, webbing is present in the embryo but resorbed later in development, but in various mammal species it occasionally persists in adulthood In humans, it can be found in those suffering from LEOPARD syndrome and from Aarskog-Scott syndrome. Webbing between the digits of the hindfoot is also present in several mammals that spend part of their time in the water") AnnotationAssertion( "Webbing accommodates movement in the water[WP]") AnnotationAssertion( "web") AnnotationAssertion( ) AnnotationAssertion( "interdigital webbing") AnnotationAssertion( "syndactylous interdigital region") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006015") AnnotationAssertion(rdfs:label "webbed interdigital region") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (interdigital region between digits 1 and 2) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An interdigital region that adjacent_to a digit 1 and adjacent_to a digit 2.") AnnotationAssertion(Annotation( ) Annotation( ) "interdigital region between digits I and II") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006016") AnnotationAssertion(rdfs:label "interdigital region between digits 1 and 2") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (interdigital region between digits 2 and 3) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An interdigital region that adjacent_to a digit 2 and adjacent_to a digit 3.") AnnotationAssertion(Annotation( ) Annotation( ) "interdigital region between digits II and III") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006019") AnnotationAssertion(rdfs:label "interdigital region between digits 2 and 3") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (interdigital region between digits 3 and 4) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An interdigital region that adjacent_to a digit 3 and adjacent_to a digit 4.") AnnotationAssertion(Annotation( ) Annotation( ) "interdigital region between digits III and IV") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006022") AnnotationAssertion(rdfs:label "interdigital region between digits 3 and 4") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (interdigital region between digits 4 and 5) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An interdigital region that adjacent_to a digit 4 and adjacent_to a digit 5.") AnnotationAssertion(Annotation( ) Annotation( ) "interdigital region between digits IV and V") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006025") AnnotationAssertion(rdfs:label "interdigital region between digits 4 and 5") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (interdigital region between manual digits 1 and 2) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An interdigital region that adjacent_to a manual digit 1 and adjacent_to a manual digit 2.") AnnotationAssertion( "EHDAA2:0000844") AnnotationAssertion( "EHDAA:6298") AnnotationAssertion( "EMAPA:17445") AnnotationAssertion(Annotation( ) Annotation( ) "interdigital region between manual digits I and II") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006026") AnnotationAssertion(rdfs:label "interdigital region between manual digits 1 and 2") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (interdigital region between manual digits 2 and 3) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An interdigital region that adjacent_to a manual digit 2 and adjacent_to a manual digit 3.") AnnotationAssertion( "EHDAA2:0000847") AnnotationAssertion( "EHDAA:6304") AnnotationAssertion( "EMAPA:17448") AnnotationAssertion(Annotation( ) Annotation( ) "interdigital region between manual digits II and III") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006029") AnnotationAssertion(rdfs:label "interdigital region between manual digits 2 and 3") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (interdigital region between manual digits 3 and 4) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An interdigital region that adjacent_to a manual digit 3 and adjacent_to a manual digit 4.") AnnotationAssertion( "EHDAA2:0000850") AnnotationAssertion( "EHDAA:6310") AnnotationAssertion( "EMAPA:17451") AnnotationAssertion(Annotation( ) Annotation( ) "interdigital region between manual digits III and IV") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006032") AnnotationAssertion(rdfs:label "interdigital region between manual digits 3 and 4") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (interdigital region between manual digits 4 and 5) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An interdigital region that adjacent_to a manual digit 4 and adjacent_to a manual digit 5.") AnnotationAssertion( "EHDAA2:0000853") AnnotationAssertion( "EHDAA:6316") AnnotationAssertion( "EMAPA:17454") AnnotationAssertion(Annotation( ) Annotation( ) "interdigital region between manual digits IV and V") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006035") AnnotationAssertion(rdfs:label "interdigital region between manual digits 4 and 5") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (interdigital region between pedal digits 1 and 2) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An interdigital region that adjacent_to a pedal digit 1 and adjacent_to a pedal digit 2.") AnnotationAssertion( "EHDAA2:0000856") AnnotationAssertion( "EHDAA:6148") AnnotationAssertion( "EMAPA:17476") AnnotationAssertion(Annotation( ) Annotation( ) "interdigital region between pedal digits I and II") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006038") AnnotationAssertion(rdfs:label "interdigital region between pedal digits 1 and 2") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (interdigital region between pedal digits 2 and 3) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An interdigital region that adjacent_to a pedal digit 2 and adjacent_to a pedal digit 3.") AnnotationAssertion( "EHDAA2:0000859") AnnotationAssertion( "EHDAA:6154") AnnotationAssertion( "EMAPA:17479") AnnotationAssertion(Annotation( ) Annotation( ) "interdigital region between pedal digits II and III") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006041") AnnotationAssertion(rdfs:label "interdigital region between pedal digits 2 and 3") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (interdigital region between pedal digits 3 and 4) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An interdigital region that adjacent_to a pedal digit 3 and adjacent_to a pedal digit 4.") AnnotationAssertion( "EHDAA2:0000862") AnnotationAssertion( "EHDAA:6160") AnnotationAssertion( "EMAPA:17482") AnnotationAssertion(Annotation( ) Annotation( ) "interdigital region between pedal digits III and IV") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006044") AnnotationAssertion(rdfs:label "interdigital region between pedal digits 3 and 4") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (interdigital region between pedal digits 4 and 5) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An interdigital region that adjacent_to a pedal digit 4 and adjacent_to a pedal digit 5.") AnnotationAssertion( "EHDAA2:0000865") AnnotationAssertion( "EHDAA:6166") AnnotationAssertion( "EMAPA:17485") AnnotationAssertion(Annotation( ) Annotation( ) "interdigital region between pedal digits IV and V") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006047") AnnotationAssertion(rdfs:label "interdigital region between pedal digits 4 and 5") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (digit 1) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A digit that is part of a digit 1 plus metapodial segment.") AnnotationAssertion( "1"^^xsd:nonNegativeInteger) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37285") AnnotationAssertion( "MA:0003023") AnnotationAssertion( "autopod digit 1") AnnotationAssertion(Annotation( ) Annotation( ) "digit I") AnnotationAssertion(Annotation( "MA:0003023") "limb digit 1") AnnotationAssertion(Annotation( ) Annotation( ) "dewclaw") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006048") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "digit 1") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (digit 2) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A digit that is part of a digit 2 plus metapodial segment.") AnnotationAssertion( "2"^^xsd:nonNegativeInteger) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37286") AnnotationAssertion( "autopod digit 2") AnnotationAssertion(Annotation( ) Annotation( ) "digit II") AnnotationAssertion( "limb digit 2") AnnotationAssertion( "second digit") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006049") AnnotationAssertion(rdfs:label "digit 2") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (digit 3) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A digit that is part of a digit 3 plus metapodial segment.") AnnotationAssertion( "3"^^xsd:nonNegativeInteger) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37287") AnnotationAssertion( "autopod digit 3") AnnotationAssertion(Annotation( ) Annotation( ) "digit III") AnnotationAssertion( "limb digit 3") AnnotationAssertion( "third digit") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006050") AnnotationAssertion(rdfs:label "digit 3") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (digit 4) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A digit that is part of a digit 4 plus metapodial segment.") AnnotationAssertion( "4"^^xsd:nonNegativeInteger) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37288") AnnotationAssertion( "autopod digit 4") AnnotationAssertion(Annotation( ) Annotation( ) "digit IV") AnnotationAssertion( "fourth digit") AnnotationAssertion( "limb digit 4") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006051") AnnotationAssertion(rdfs:label "digit 4") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (digit 5) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A digit that is part of a digit 5 plus metapodial segment.") AnnotationAssertion( "5"^^xsd:nonNegativeInteger) AnnotationAssertion( "EMAPA:17441") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37289") AnnotationAssertion( "autopod digit 5") AnnotationAssertion(Annotation( ) Annotation( ) "digit V") AnnotationAssertion( "fifth digit") AnnotationAssertion( "limb digit 5") AnnotationAssertion( "uberon") AnnotationAssertion( "digiti minimi") AnnotationAssertion( "UBERON:0006052") AnnotationAssertion(rdfs:label "digit 5") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (surface of occiput) AnnotationAssertion(Annotation( ) "The occiput is the anatomical term for the posterior (back) portion of the head.") AnnotationAssertion( ) AnnotationAssertion( "FMA:46479") AnnotationAssertion( "galen:Occiput") AnnotationAssertion(Annotation( "FMA:46479") "occiput surface") AnnotationAssertion(Annotation( "FMA:46479") "regio occipitalis (capitis)") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:46479") "occiput") AnnotationAssertion(Annotation( ) Annotation( ) "occiput cranii") AnnotationAssertion( "UBERON:0006054") AnnotationAssertion(rdfs:label "surface of occiput") AnnotationAssertion( "Double:cowlick.jpg"^^xsd:anyURI) SubClassOf( ) # Class: (posterior surface of head) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006056") AnnotationAssertion(rdfs:label "posterior surface of head") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete multi-segment region) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006057") AnnotationAssertion(rdfs:label "obsolete multi-segment region") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (multi-limb segment region) AnnotationAssertion(Annotation( ) "A collection of two or more connected limb segments. Examples: arm (comprising stylopod and zeugopod regions).") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006058") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "multi-limb segment region") AnnotationAssertion(rdfs:seeAlso "https://github.com/obophenotype/uberon/issues/514"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (falx cerebri) AnnotationAssertion(Annotation( ) "The falx cerebri, also known as the cerebral falx, so named from its sickle-like form, is a strong, arched fold of dura mater which descends vertically in the longitudinal fissure between the cerebral hemispheres. It is narrow in front, where it is attached to the crista galli of the ethmoid; and broad behind, where it is connected with the upper surface of the tentorium cerebelli. Its upper margin is convex, and attached to the inner surface of the skull in the middle line, as far back as the internal occipital protuberance; it contains the superior sagittal sinus. Its lower margin is free and concave, and contains the inferior sagittal sinus. The falx cerebri is known to calcify with age.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:18551") AnnotationAssertion( "FMA:83967") AnnotationAssertion( "NCIT:C12890") AnnotationAssertion(Annotation( "ncithesaurus:Falx_Cerebri") "UMLS:C0228120") AnnotationAssertion(Annotation( "FMA:83967") "cerebral falx") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006059") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "falx cerebri") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/f/ff/Falxcerebri.jpg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "definitional"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (conotruncus) AnnotationAssertion(Annotation( "UBERON:gg") "The distal portion of Bulbus cordis that forms an outflow channel and gives rise to the proximal conus cordis.") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000437") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "DOI:10.1152/physrev.00006.2003 Moorman AFM and Christoffels VM, Cardiac Chamber Formation: Development, Genes, and Evolution. Physiol Rev (2003)") "The conus arteriosus is considered a component part of the heart because it has a myocardial wall and lies within the pericardial cavity. It is a feature of the evolutionary primitive state. In amphibians it is called the bulbus cordis, a term that is also used for its equivalent in mammalian embryos. The more derived extant bony fish, like the zebrafish, do not have this cardiac compartment. They have a so-called bulbus arteriosus, which is not enclosed by cardiac muscle, but by elastic tissue and smooth muscle, and therefore is considered to be a specialization of the proximal part of the ventral aorta (256). However, similar to the mammalian condition (306, 326, 339), the bulbus arteriosus in zebrafish embryonic hearts is surrounded by myocardium that disappears with development (134, 135). The bony fish bulbus arteriosus might thus be homologous to the shark conus arteriosus and amphibian/mammalian bulbus cordis.[well established][VHOG]") AnnotationAssertion( "EMAPA:16338") AnnotationAssertion( "VHOG:0000437") AnnotationAssertion(Annotation( "VHOG:0000437") "bulbus cordis rostral half") AnnotationAssertion( "cardiac conotruncus") AnnotationAssertion(Annotation( "EMAPA:16221") "rostral half of bulbus cordis") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006060") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "conotruncus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (process of vertebra) AnnotationAssertion(Annotation( ) "A process projection from a part of the vertebra such as centrum or arches. Examples: transverse process, diapophyses, parapophyses, and zygapophyses (both the cranial zygapophyses and the caudal zygapophyses).") AnnotationAssertion( ) AnnotationAssertion( "AAO:0000739") AnnotationAssertion( "FMA:24530") AnnotationAssertion( "NCIT:C116112") AnnotationAssertion( "vertebra process") AnnotationAssertion(Annotation( "FMA:24530") "vertebral process") AnnotationAssertion(Annotation( "AAO:0000739") "spinous process") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006061") AnnotationAssertion(rdfs:label "process of vertebra") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (zygapophysis) AnnotationAssertion(Annotation( ) Annotation( "AAO:Pugener_and_Maglia_2008") "Paired processes at the cephalic and caudal ends of the neural arch. They function as interlocking structures between adjacent vertebrae, and limit dorsoventral flexion and lateral movement of the column in the trunk region[AAO]. The articular processes or zygapophyses of a vertebra, in human anatomy contain two superior and two inferior, spring from the junctions of the pedicles and laminae. These stick out of an end of a vertebra to lock with a zygapophysis on the next vertebra, to make the backbone more stable. The superior processes project upward from a lower vertebra, and their articular surfaces are directed more or less backward. The inferior processes project downward from a higher vertebra, and their articular surfaces are directed more or less forward and outward. The articular surfaces are coated with hyaline cartilage.") AnnotationAssertion( "TODO - class as endochondral bone, check species") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0000710") Annotation( "AAO"^^xsd:string) Annotation( "AAO:Pugener_and_Maglia_2008") "Paired processes at the cephalic and caudal ends of the neural arch. They function as interlocking structures between adjacent vertebrae, and limit dorsoventral flexion and lateral movement of the column in the trunk region.[AAO]") AnnotationAssertion(Annotation( ) "articular process") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0000710") AnnotationAssertion( "FMA:11952") AnnotationAssertion( "TAO:0001549") AnnotationAssertion( "ZFA:0001603") AnnotationAssertion(Annotation( "FMA:11952") Annotation( ) "articular process of vertebra") AnnotationAssertion(Annotation( "FMA:11952") "processus articularis (zygapophysis)") AnnotationAssertion(Annotation( ) "zygapophysis") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "TAO:0001549") "intercalarium articulating process") AnnotationAssertion(Annotation( ) Annotation( ) "p. articularis vertebrae") AnnotationAssertion(Annotation( ) Annotation( ) "processus articularis vertebrae") AnnotationAssertion( "UBERON:0006062") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "zygapophysis") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/3/3e/Processusarticularissuperiorvertebrae.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (cartilaginous neural arch) AnnotationAssertion(Annotation( "BTO:0001763") "One of the cartilaginous structures surrounding the embryonic spinal cord, formed by the dorsal growth of the dorsolateral arcualia; it is the primordium of the vertebral arch.") AnnotationAssertion( "BTO:0001763") AnnotationAssertion( "uberon") AnnotationAssertion( "neural arch primordium") AnnotationAssertion( "UBERON:0006063") AnnotationAssertion(rdfs:label "cartilaginous neural arch") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (musculature of hindlimb zeugopod) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "Any collection of muscles that is part of a hindlimb zeugopod.") AnnotationAssertion( "FMA:50211") AnnotationAssertion(Annotation( "FMA:50211") "leg musculature") AnnotationAssertion(Annotation( "FMA:50211") "muscle group of leg") AnnotationAssertion(Annotation( "FMA:50211") "set of muscles of leg") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006067") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "musculature of hindlimb zeugopod") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (caudal region) AnnotationAssertion(Annotation( ) "Subdivision of an organism along anterior-posterior axis that is the posteriormost region, extending past the anus (or cloaca, if present), consisting of a tail in some fully formed chordates (or a tail bud in embryos). In animals that have a sacral region, this is the region immediately posterior to this.") AnnotationAssertion( "This region is reduced in humans and corresponds to the coccyx") AnnotationAssertion(Annotation( "XAO"^^xsd:string) "We follow XAO is distinguishing the tail region from the tail; the tail bud is part of the tail region; the tail starts after the tail bud") AnnotationAssertion( "XAO:0000087") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "post-anal caudal region") AnnotationAssertion(Annotation( ) "post-anal tail region") AnnotationAssertion(Annotation( "AAO:0000082") "postsacral region") AnnotationAssertion(Annotation( "AAO:0000082") "tail region") AnnotationAssertion( "UBERON:0006071") AnnotationAssertion(rdfs:label "caudal region") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (cervical region of vertebral column) AnnotationAssertion(Annotation( ) "That portion of the spine comprising the cervical vertebrae. The neck area of the spine.") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0000092") Annotation( "AAO"^^xsd:string) Annotation( "AAO:Duellman_and_Trueb_1994"^^xsd:string) "Anterior region of the vertebral column consisting of one to 19 or 20 vertebrae.[AAO]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0000092") AnnotationAssertion( "BTO:0004148") AnnotationAssertion( "EHDAA2:0000238") AnnotationAssertion( "EHDAA:5051") AnnotationAssertion( "EMAPA:17215") AnnotationAssertion( "FMA:24138") AnnotationAssertion( "MA:0003154") AnnotationAssertion( "NCIT:C69313") AnnotationAssertion(Annotation( "ncithesaurus:Cervical_Spine") "UMLS:C0728985") AnnotationAssertion(Annotation( "MA:0003154") "axial skeleton cervical region") AnnotationAssertion(Annotation( "EHDAA2:0000238") "cervical skeleton") AnnotationAssertion(Annotation( "FMA:24138") "cervical spinal column") AnnotationAssertion(Annotation( "FMA:24138") "cervical spine") AnnotationAssertion( "cervical vertebrae series") AnnotationAssertion(Annotation( "FMA:24138") "cervical vertebral column") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:24138") "skeletal system of neck") AnnotationAssertion( "UBERON:0006072") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "cervical region of vertebral column") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (thoracic region of vertebral column) AnnotationAssertion(Annotation( ) "That part of the spine comprising the thoracic vertebrae.") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0000612") Annotation( "AAO"^^xsd:string) Annotation( "AAO:Duellman_and_Trueb_1994"^^xsd:string) "Region of the vertebral column between the atlas and the sacrum consisting of seven to 285 vertebrae.[AAO]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0000612") AnnotationAssertion( "BTO:0004150") AnnotationAssertion( "EHDAA:5063") AnnotationAssertion( "EMAPA:17396") AnnotationAssertion( "FMA:9140") AnnotationAssertion( "MA:0003155") AnnotationAssertion( "NCIT:C69315") AnnotationAssertion(Annotation( "ncithesaurus:Thoracic_Spine") "UMLS:C0581269") AnnotationAssertion(Annotation( "MA:0003155") "axial skeleton thoracic region") AnnotationAssertion(Annotation( "FMA:9140") "columna vertebralis thoracicus") AnnotationAssertion(Annotation( "FMA:9140") "thoracic spine") AnnotationAssertion( "thoracic vertebrae series") AnnotationAssertion(Annotation( "FMA:9140") "thoracic vertebral column") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006073") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "thoracic region of vertebral column") SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lumbar region of vertebral column) AnnotationAssertion(Annotation( "UBERONREF:0000006") "Subdivision of vertebral column that corresponds to the lumbar subdivision of the body, containing the lumbar vertebrae.") AnnotationAssertion( "lumbar") AnnotationAssertion( ) AnnotationAssertion( "BTO:0004147") AnnotationAssertion( "EHDAA2:0001037") AnnotationAssertion( "EHDAA:5055") AnnotationAssertion( "EMAPA:17393") AnnotationAssertion( "FMA:16203") AnnotationAssertion( "GAID:31") AnnotationAssertion( "MA:0003156") AnnotationAssertion( "NCIT:C69314") AnnotationAssertion(Annotation( "MA:0003156") "axial skeleton lumbar region") AnnotationAssertion(Annotation( "EHDAA2:0001037") "lumbar skeleton") AnnotationAssertion(Annotation( "BTO:0004147") "lumbar spine") AnnotationAssertion( "lumbar vertebrae series") AnnotationAssertion(Annotation( "FMA:16203") "lumbar vertebral column") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006074") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "lumbar region of vertebral column") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (sacral region of vertebral column) AnnotationAssertion(Annotation( "UBERONREF:0000006") "Subdivision of vertebral column that corresponds to the sacral subdivision of the body, containing the sacral vertebrae or sacrum.") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0000724") Annotation( "AAO"^^xsd:string) Annotation( "AAO:Duellman_and_Trueb_1994"^^xsd:string) "Region of the vertebral column represented by one or two vertebrae.[AAO]") AnnotationAssertion( "In adult humans, the sacral skeleton is fused and called the sacrum") AnnotationAssertion( ) AnnotationAssertion( "AAO:0000724") AnnotationAssertion( "EHDAA2:0001772") AnnotationAssertion( "EHDAA:5059") AnnotationAssertion( "EMAPA:17676") AnnotationAssertion( "GAID:32") AnnotationAssertion( "MA:0003157") AnnotationAssertion( "NCIT:C33508") AnnotationAssertion(Annotation( "MA:0003157") "axial skeleton sacral region") AnnotationAssertion(Annotation( "EHDAA2:0001772") "sacral skeleton") AnnotationAssertion( "sacral vertebrae series") AnnotationAssertion( "sacrum") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006075") AnnotationAssertion(rdfs:label "sacral region of vertebral column") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (caudal region of vertebral column) AnnotationAssertion(Annotation( "UBERONREF:0000006") "Subdivision of vertebral column that corresponds to the caudal subdivision of the body, containing the caudal vertebrae.") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0000082") Annotation( "AAO"^^xsd:string) Annotation( "AAO:Duellman_and_Trueb_1994"^^xsd:string) "Region of the vertebral column posterior to the caudal-sacral region, that may consists of two or three to more than 100 vertebrae. These vertebrae exhibit a gradual reduction in the sizes of their transverse processes and zygapophyses, but these structures are never entirely absent. All caudal vertebrae bear haemal arches.[AAO]") AnnotationAssertion(Annotation( "AAO"^^xsd:string) "in AAO, this is posterior to the caudal-sacral region") AnnotationAssertion( "AAO:0000082") AnnotationAssertion( "EMAPA:18043") AnnotationAssertion( "MA:0003158") AnnotationAssertion(Annotation( "MA:0003158") "axial skeleton tail region") AnnotationAssertion(Annotation( "UBERONREF:0000006") "caudal skeleton") AnnotationAssertion(Annotation( ) "caudal vertebrae series") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "AAO:0000082") "caudal region") AnnotationAssertion(Annotation( "AAO:0000082") "postsacral region") AnnotationAssertion(Annotation( "AAO:0000082") "tail region") AnnotationAssertion( "UBERON:0006076") AnnotationAssertion(rdfs:label "caudal region of vertebral column") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (subdivision of vertebral column) AnnotationAssertion(Annotation( ) "A collection of all skeletal elements in some subdivision of the vertebral column.") AnnotationAssertion( "FMA:16201") AnnotationAssertion(Annotation( ) "subdivision of vertebral skeleton") AnnotationAssertion( "vertebrae series") AnnotationAssertion(Annotation( "FMA:16201") "vertebral column subdivision") AnnotationAssertion( "vertebral series") AnnotationAssertion( "uberon") AnnotationAssertion( "vertebral region") AnnotationAssertion( "vertebral subdivision") AnnotationAssertion( "UBERON:0006077") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "subdivision of vertebral column") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (subdivision of spinal cord lateral column) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006078") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "subdivision of spinal cord lateral column") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (subdivision of spinal cord dorsal column) AnnotationAssertion( "FMA:258190") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:258190") "segment of dorsal funiculus of spinal cord") AnnotationAssertion( "UBERON:0006079") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "subdivision of spinal cord dorsal column") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete segment of white matter of spinal cord) AnnotationAssertion( "FMA:258174") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006080") AnnotationAssertion(rdfs:label "obsolete segment of white matter of spinal cord") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (fundus of gallbladder) AnnotationAssertion(Annotation( ) "The fundus of gallbladder is the portion of the gallbladder which lies the farthest from the cystic duct. It is covered with peritoneum. A traditional cholecystectomy is most commonly performed from the infundibulum to the fundus. It's at the same level as the transpyloric plane.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:14536") AnnotationAssertion( "NCIT:C32648") AnnotationAssertion(Annotation( "ncithesaurus:Gallbladder_Fundus") "UMLS:C0227544") AnnotationAssertion(Annotation( "FMA:14536") "gallbladder fundus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "fundus of the gallbladder") AnnotationAssertion(Annotation( ) Annotation( ) "fundus vesicae biliaris") AnnotationAssertion(Annotation( ) "gallbladder fundus") AnnotationAssertion( "UBERON:0006081") AnnotationAssertion(rdfs:label "fundus of gallbladder") AnnotationAssertion( "Gray1095:parts.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (fundus of urinary bladder) AnnotationAssertion(Annotation( ) Annotation( "MP:0011785") "The base or posterior surface of the urinary bladder contains the trigone of the bladder and the outlet where urine empties through the internal urethral orifice.") AnnotationAssertion(Annotation( "FMA:15908") "fundus of bladder") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0000582") AnnotationAssertion( "EHDAA:9330") AnnotationAssertion( "EMAPA:35173") AnnotationAssertion( "EMAPA_RETIRED:18322") AnnotationAssertion( "FMA:15908") AnnotationAssertion( "MA:0001694") AnnotationAssertion( "NCIT:C48939") AnnotationAssertion(Annotation( "ncithesaurus:Bladder_Fundus") "UMLS:C0447584") AnnotationAssertion( "VHOG:0001184") AnnotationAssertion(Annotation( "FMA:15908") "base of urinary bladder") AnnotationAssertion(Annotation( "FMA:15908") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "fundus vesicae") AnnotationAssertion(Annotation( "MP:0011785") "urinary bladder base") AnnotationAssertion(Annotation( "FMA:15908") "urinary bladder fundus") AnnotationAssertion(Annotation( "MA:0001694") "urinary bladder fundus region") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "EMAPA:35173") "bladder dome") AnnotationAssertion( "UBERON:0006082") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "fundus of urinary bladder") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2-modified") ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (perirhinal cortex) AnnotationAssertion(Annotation( "NLXANAT:1005006") "Region of cortex near to the rhinal sulcus. It is defined differently in different nomenclatures, due in part to the lack of agreement on the definition of the border of this region. In the rat, the perirhinal cortex occupies only caudal levels of the rhinal sulcus while in the monkey, it occurpies the full rostrocaudal extent of the rhinal sulcus (Burwell et al., Hippocampus, 5: 390-408, 1995).") AnnotationAssertion(Annotation( "MA"^^xsd:string) "in MA classified as part of insular cortex, but this is contested by MM - https://support.crbs.ucsd.edu/browse/NIF-9830") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:PERI") AnnotationAssertion( "BAMS:PRh") AnnotationAssertion( "BM:Tel-Cx-PRh") AnnotationAssertion( "BTO:0004355") AnnotationAssertion( "EFO:0001978") AnnotationAssertion( "EMAPA:35682") AnnotationAssertion( "MA:0000912") AnnotationAssertion( "MBA:922") AnnotationAssertion( "NLXANAT:1005006") AnnotationAssertion( "PBA:128012080") AnnotationAssertion(Annotation( "NLXANAT:1005006") "perirhinal area") AnnotationAssertion(Annotation( "NLXANAT:1005006") "perirhinal cortex") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:2425") "Brodmann's area 35") AnnotationAssertion(Annotation( "NeuroNames:2425") Annotation( ) "area perirhinalis") AnnotationAssertion(Annotation( "BAMS:PERI") "perihinal area") AnnotationAssertion( "UBERON:0006083") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "perirhinal cortex") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "NIFSTD"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (stria medullaris) AnnotationAssertion(Annotation( "ISBN:0471888893"^^xsd:string) "The major afferent track to the habenula from the telencephalon (particularly in the septal side) in all vertebrates[Butler and Hodos].") AnnotationAssertion(Annotation( "ISBN:0471888893"^^xsd:string) ) AnnotationAssertion(Annotation( "FMA:62080") "Stria medullaris of thalamus is a slender fiber bundle on the dorsal surface of the diencephalon which terminates posteriorly in the habenular nuclei[FMA:62080].") AnnotationAssertion( "this is placed under 'epithalamus related' in MBA") AnnotationAssertion(Annotation( "BIRNLEX:1066") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "SM") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:St.m.") AnnotationAssertion( "BAMS:sm") AnnotationAssertion( "BAMS:st") AnnotationAssertion( "BIRNLEX:1066") AnnotationAssertion( "BM:Die-SM") AnnotationAssertion( "DHBA:10590") AnnotationAssertion( "DMBA:17794") AnnotationAssertion( "EMAPA:36607") AnnotationAssertion( "FMA:62080") AnnotationAssertion( "HBA:9275") AnnotationAssertion( "MBA:802") AnnotationAssertion(Annotation( "BIRNLEX:1066") "UMLS:C0228321") AnnotationAssertion(Annotation( "BIRNLEX:1066") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=298") AnnotationAssertion(Annotation( "BIRNLEX:1066") "stria habenularis") AnnotationAssertion(Annotation( "BIRNLEX:1066") "stria medullaris (Wenzel-Wenzel)") AnnotationAssertion(Annotation( "BIRNLEX:1066") Annotation( "FMA:62080") "stria medullaris of thalamus") AnnotationAssertion(Annotation( "BIRNLEX:1066") Annotation( ) "stria medullaris thalami") AnnotationAssertion(Annotation( "BIRNLEX:1066") "stria medullaris thalamica") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BAMS:sm") "stria medularis") AnnotationAssertion(Annotation( "NeuroNames:298") "stria medullaris (Wenzel-Wenzel)") AnnotationAssertion(Annotation( "NeuroNames:298") "stria medullaris of the thalamus") AnnotationAssertion( "UBERON:0006086") AnnotationAssertion(rdfs:label "stria medullaris") SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf(Annotation( "NIFSTD"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) # Class: (internal arcuate fiber bundle) AnnotationAssertion(Annotation( ) "Internal arcuate fibers are the axons of second-order neurons contained within the gracile and cuneate nuclei of the medulla oblongata. These fibers cross from one side of the medulla to the other to form the medial lemniscus. Part of the dorsal column-medial lemniscus system (second neuron), the internal arcuate fibers are important for relaying the sensation of fine touch and proprioception to the thalamus and ultimately to the cerebral cortex.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:ia") AnnotationAssertion( "BAMS:iaf") AnnotationAssertion( "BIRNLEX:1091") AnnotationAssertion( "DHBA:12756") AnnotationAssertion( "FMA:72629") AnnotationAssertion( "HBA:265505610") AnnotationAssertion( "MBA:396") AnnotationAssertion(Annotation( "BIRNLEX:1091") "UMLS:C0228533") AnnotationAssertion(Annotation( "BIRNLEX:1091") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=795") AnnotationAssertion(Annotation( "BIRNLEX:1091") "arcuate fibers medial lemniscus") AnnotationAssertion(Annotation( "FMA:72629") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "fibrae arcuatae internae") AnnotationAssertion(Annotation( "BIRNLEX:1091") "internal arcuate fibers") AnnotationAssertion(Annotation( "FMA:72629") "internal arcuate fibers") AnnotationAssertion(Annotation( "FMA:72629") "internal arcuate fibres") AnnotationAssertion(Annotation( "FMA:72629") "internal arcuate tract") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:795") "arcuate fibers (medial lemniscus)") AnnotationAssertion(Annotation( "NeuroNames:795") Annotation( ) "fibre arciformes olivares") AnnotationAssertion(Annotation( "NeuroNames:795") Annotation( ) "fibre arciformes sensibiles") AnnotationAssertion( "UBERON:0006087") AnnotationAssertion(rdfs:label "internal arcuate fiber bundle") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (inferior parietal cortex) AnnotationAssertion(Annotation( "BIRNLEX:1194") "Component of the parietal lobe. The inferior parietal cortex label includes the inferior parietal gyrus and the angular gyrus and lies inferior to the superior parietal gyrus. The rostral and caudal boundaries were the supramarginal gyrus and the parieto-occipital incisure respectively. The medial and lateral boundaries were the superior parietal gyrus and the middle temporal gyrus respectively (Christine Fennema-Notestine).") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:1194") AnnotationAssertion( "DHBA:12134") AnnotationAssertion( "EFO:0001951") AnnotationAssertion( "FMA:77536") AnnotationAssertion( "HBA:4103") AnnotationAssertion(Annotation( "BIRNLEX:1194") "UMLS:C0152304") AnnotationAssertion(Annotation( "BIRNLEX:1194") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=107") AnnotationAssertion(Annotation( "BIRNLEX:1194") "inferior parietal cortex") AnnotationAssertion(Annotation( "BIRNLEX:1194") "inferior parietal lobule") AnnotationAssertion(Annotation( "FMA:77536") "inferior parietal lobule") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:107") "inferior parietal gyrus") AnnotationAssertion(Annotation( "NeuroNames:107") "inferior portion of parietal gyrus") AnnotationAssertion(Annotation( "NeuroNames:107") Annotation( ) "lobulus parietalis inferior") AnnotationAssertion(Annotation( "NeuroNames:107") "subparietal district") AnnotationAssertion(Annotation( "NeuroNames:107") "subparietal lobule") AnnotationAssertion( "UBERON:0006088") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "inferior parietal cortex") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (dorsal external arcuate fiber bundle) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:dea") AnnotationAssertion( "BIRNLEX:1250") AnnotationAssertion( "DHBA:12737") AnnotationAssertion( "FMA:72630") AnnotationAssertion(Annotation( "BIRNLEX:1250") "UMLS:C0175552") AnnotationAssertion(Annotation( "BIRNLEX:1250") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=796") AnnotationAssertion(Annotation( "BIRNLEX:1250") "dorsal external arcuate fiber bundle") AnnotationAssertion(Annotation( "BIRNLEX:1250") "dorsal external arcuate fibers") AnnotationAssertion(Annotation( "FMA:72630") "dorsal external arcuate fibers") AnnotationAssertion(Annotation( "FMA:72630") "dorsal external arcuate tract") AnnotationAssertion(Annotation( "BIRNLEX:1250") "dorsal superficial arcuate fibers") AnnotationAssertion(Annotation( "FMA:72630") "dorsal superficial arcuate fibers") AnnotationAssertion(Annotation( "BIRNLEX:1250") "external arcuate fibers") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:796") Annotation( ) "fibrae arcuatae externae dorsales") AnnotationAssertion(Annotation( "NeuroNames:796") Annotation( ) "fibrae arcuatae externae posteriores") AnnotationAssertion( "UBERON:0006089") AnnotationAssertion(rdfs:label "dorsal external arcuate fiber bundle") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (glossopharyngeal nerve fiber bundle) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:9nf") AnnotationAssertion( "BIRNLEX:1274") AnnotationAssertion( "FMA:72627") AnnotationAssertion(Annotation( "BIRNLEX:1274") "UMLS:C0175550") AnnotationAssertion(Annotation( "BIRNLEX:1274") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=793") AnnotationAssertion(Annotation( "BIRNLEX:1274") "central part of glossopharyngeal nerve") AnnotationAssertion(Annotation( "FMA:72627") "central part of glossopharyngeal nerve") AnnotationAssertion(Annotation( "BIRNLEX:1274") "glossopharyngeal nerve fiber bundle") AnnotationAssertion(Annotation( "BIRNLEX:1274") "glossopharyngeal nerve fibers") AnnotationAssertion(Annotation( "FMA:72627") "glossopharyngeal nerve fibers") AnnotationAssertion(Annotation( "FMA:72627") "glossopharyngeal nerve tract") AnnotationAssertion(Annotation( "BIRNLEX:1274") "ninth cranial nerve fibers") AnnotationAssertion(Annotation( "FMA:72627") "ninth cranial nerve fibers") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:793") Annotation( ) "fibrae nervi glossopharyngei") AnnotationAssertion( "UBERON:0006090") AnnotationAssertion(rdfs:label "glossopharyngeal nerve fiber bundle") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (inferior horn of the lateral ventricle) AnnotationAssertion(Annotation( "BIRNLEX:1292") "The part of the lateral ventricle extending downward and anteriorly in the temporal lobe.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:TLV") AnnotationAssertion( "BIRNLEX:1292") AnnotationAssertion( "DHBA:10600") AnnotationAssertion( "EMAPA:17771") AnnotationAssertion( "FMA:83701") AnnotationAssertion(Annotation( "BIRNLEX:1292") "UMLS:C0152283") AnnotationAssertion(Annotation( "FMA:83701") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "cornu inferius (ventriculi lateralis)") AnnotationAssertion(Annotation( "FMA:83701") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "cornu inferius ventriculi lateralis") AnnotationAssertion(Annotation( "FMA:83701") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "cornu temporale (ventriculi lateralis)") AnnotationAssertion(Annotation( "FMA:83701") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "cornu temporale ventriculi lateralis") AnnotationAssertion(Annotation( "FMA:83701") "inferior horn of lateral ventricle") AnnotationAssertion(Annotation( "BIRNLEX:1292") "inferior horn of the lateral ventricle") AnnotationAssertion(Annotation( "BIRNLEX:1292") "temporal horn of lateral ventricle") AnnotationAssertion(Annotation( "FMA:83701") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "ventriculus lateralis, cornu inferius") AnnotationAssertion(Annotation( "FMA:83701") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "ventriculus lateralis, cornu temporale") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006091") AnnotationAssertion(rdfs:label "inferior horn of the lateral ventricle") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (cuneus cortex) AnnotationAssertion(Annotation( "BIRNLEX:1396") "Component of the occipital lobe. The rostral boundary was the first coronal slice above the calcarine sulcus where the cuneus cortex becomes visible whereas the caudal boundary was the last slice where the calcarine sulcus was visualized. The medial boundary was the most medial portion of the occipital and parietal cortices. The superio-lateral boundary was the parieto-occipital fissure whereas the inferolateral boundary was the pericalcarine cortex (Christine Fennema-Notestine).") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:Cun") AnnotationAssertion( "BIRNLEX:1396") AnnotationAssertion( "DHBA:12150") AnnotationAssertion( "FMA:61903") AnnotationAssertion( "HBA:4184") AnnotationAssertion(Annotation( "BIRNLEX:1396") "UMLS:C0152307") AnnotationAssertion(Annotation( "BIRNLEX:1396") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=157") AnnotationAssertion(Annotation( "BIRNLEX:1396") "cuneate lobule") AnnotationAssertion(Annotation( "FMA:61903") "cuneate lobule") AnnotationAssertion(Annotation( "BIRNLEX:1396") "cuneus") AnnotationAssertion(Annotation( "BIRNLEX:1396") "cuneus cortex") AnnotationAssertion(Annotation( "BIRNLEX:1396") "cuneus gyrus") AnnotationAssertion(Annotation( "FMA:61903") "cuneus gyrus") AnnotationAssertion(Annotation( "BIRNLEX:1396") "cuneus of hemisphere") AnnotationAssertion(Annotation( "FMA:61903") "cuneus of hemisphere") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:157") Annotation( ) "gyrus cuneus") AnnotationAssertion( "UBERON:0006092") AnnotationAssertion(rdfs:label "cuneus cortex") SubClassOf( ) # Class: (precuneus cortex) AnnotationAssertion(Annotation( "BIRNLEX:1446") "Component of the pareital lobe. The rostral boundary was the posterior extent of the paracentral lobule whereas the caudal boundary was the lingual gyrus. The medial and lateral boundaries were the parieto-occipital fissure and the superior parietal gyrus respectively (Christine Fennema-Notestine).") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:PCu") AnnotationAssertion( "BAMS:PCun") AnnotationAssertion( "BIRNLEX:1446") AnnotationAssertion( "DHBA:12137") AnnotationAssertion( "FMA:61900") AnnotationAssertion( "HBA:4118") AnnotationAssertion( "NCIT:C112399") AnnotationAssertion(Annotation( "BIRNLEX:1446") "UMLS:C0152306") AnnotationAssertion(Annotation( "BIRNLEX:1446") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=110") AnnotationAssertion(Annotation( "BIRNLEX:1446") "precuneate lobule") AnnotationAssertion(Annotation( "FMA:61900") "precuneate lobule") AnnotationAssertion(Annotation( "BIRNLEX:1446") "precuneus") AnnotationAssertion(Annotation( "BIRNLEX:1446") "precuneus cortex") AnnotationAssertion(Annotation( "BIRNLEX:1446") "quadrate lobule") AnnotationAssertion(Annotation( "FMA:61900") "quadrate lobule") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:110") "medial area of the superior parietal cortex") AnnotationAssertion(Annotation( "NeuroNames:110") Annotation( ) "praecuneus") AnnotationAssertion( "UBERON:0006093") AnnotationAssertion(rdfs:label "precuneus cortex") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (superior parietal cortex) AnnotationAssertion(Annotation( "BIRNLEX:1450") "Copmonent of the parietal lobe. The rostral and caudal boundaries of the superior parietal cortex were the precentral gyrus and lateral occipital cortex respectively. The medial and lateral boundaries were the precuneus and/or cuneus cortex and the infererior parietal cortex respectively (Christine Fennema-Notestine).") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:SPL") AnnotationAssertion( "BIRNLEX:1450") AnnotationAssertion( "FMA:61899") AnnotationAssertion( "HBA:4096") AnnotationAssertion(Annotation( "BIRNLEX:1450") "UMLS:C0152303") AnnotationAssertion(Annotation( "BIRNLEX:1450") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=106") AnnotationAssertion(Annotation( "BIRNLEX:1450") "superior parietal cortex") AnnotationAssertion(Annotation( "BIRNLEX:1450") "superior parietal gyrus") AnnotationAssertion(Annotation( "FMA:61899") "superior parietal gyrus") AnnotationAssertion(Annotation( "BIRNLEX:1450") "superior parietal lobule") AnnotationAssertion(Annotation( "BIRNLEX:1450") "superior portion of parietal gyrus") AnnotationAssertion(Annotation( "FMA:61899") "superior portion of parietal gyrus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:106") Annotation( ) "gyrus parietalis superior") AnnotationAssertion(Annotation( "NeuroNames:106") Annotation( ) "lobulus parietalis superior") AnnotationAssertion( "UBERON:0006094") AnnotationAssertion(rdfs:label "superior parietal cortex") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "NIFSTD"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (anterior transverse temporal area 41) AnnotationAssertion(Annotation( "BIRNLEX:1582") "A subdivision of the cytoarchitecturally defined temporal region of cerebral cortex. It occupies the anterior transverse temporal gyrus (H) in the bank of the lateral sulcus on the dorsal surface of the temporal lobe. Cytoarchitecturally it is bounded medially by the parainsular area 52 (H) and laterally by the posterior transverse temporal area 42 (H) (Brodmann-1909). Adapted from Brain Info.") AnnotationAssertion( "UBERON:0013574") AnnotationAssertion(Annotation( "BIRNLEX:1774") Annotation( "NIFSTD:SumsDB_abbrevSource"^^xsd:string) Annotation( ) "B09-41") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:1582") AnnotationAssertion( "BIRNLEX:1774") AnnotationAssertion( "FMA:68638") AnnotationAssertion(Annotation( "BIRNLEX:1774") "UMLS:C1272502") AnnotationAssertion(Annotation( "BIRNLEX:1582") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=95") AnnotationAssertion(Annotation( "BIRNLEX:1774") "B09-41") AnnotationAssertion(Annotation( ) "BA41") AnnotationAssertion(Annotation( "BIRNLEX:1774") "Brodmann (1909) area 41") AnnotationAssertion(Annotation( "FMA:68638") "Brodmann area 41") AnnotationAssertion(Annotation( "BIRNLEX:1774") "Brodmann area 41, anterior transverse temporal") AnnotationAssertion(Annotation( "BIRNLEX:1582") "Brodmann's area 41") AnnotationAssertion(Annotation( "FMA:68638") "anterior transverse temporal area 41") AnnotationAssertion(Annotation( "BIRNLEX:1582") Annotation( ) "anterior transverse termporal area 41") AnnotationAssertion(Annotation( "BIRNLEX:1582") "area 41 of Brodmann") AnnotationAssertion(Annotation( "FMA:68638") "area 41 of Brodmann") AnnotationAssertion(Annotation( "BIRNLEX:1774") "area 41 of Brodmann-1909") AnnotationAssertion(Annotation( "BIRNLEX:1774") "area temporalis transversa anterior") AnnotationAssertion(Annotation( "BIRNLEX:1582") "principle auditory receptive areas") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006095") AnnotationAssertion(rdfs:label "anterior transverse temporal area 41") SubClassOf(Annotation( "NIFSTD"^^xsd:string) ) # Class: (posterior transverse temporal area 42) AnnotationAssertion(Annotation( "BIRNLEX:1589") "A subdivision of the cytoarchitecturally defined temporal region of cerebral cortex. It is located in the bank of the lateral sulcus on the dorsal surface of the temporal lobe. Cytoarchitecturally it is bounded medially by the anterior transverse temporal area 41(H) and laterally by the superior temporal area 22 (Brodmann-1909). Adapted from Brain Info.") AnnotationAssertion( "UBERON:0013575") AnnotationAssertion(Annotation( "BIRNLEX:1775") Annotation( "NIFSTD:SumsDB_abbrevSource"^^xsd:string) Annotation( ) "B09-42") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:1589") AnnotationAssertion( "BIRNLEX:1775") AnnotationAssertion( "FMA:236867") AnnotationAssertion( "FMA:68639") AnnotationAssertion(Annotation( "BIRNLEX:1775") "UMLS:C1272506") AnnotationAssertion(Annotation( "BIRNLEX:1589") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=96") AnnotationAssertion(Annotation( "BIRNLEX:1775") "B09-42") AnnotationAssertion(Annotation( ) "BA42") AnnotationAssertion(Annotation( "BIRNLEX:1775") "Brodmann (1909) area 42") AnnotationAssertion(Annotation( "FMA:68639") "Brodmann area 42") AnnotationAssertion(Annotation( "BIRNLEX:1775") "Brodmann area 42, posterior transverse temporal") AnnotationAssertion(Annotation( "BIRNLEX:1589") "Brodmann's area 42") AnnotationAssertion(Annotation( "BIRNLEX:1589") "area 42 of Brodmann") AnnotationAssertion(Annotation( "FMA:68639") "area 42 of Brodmann") AnnotationAssertion(Annotation( "BIRNLEX:1775") "area 42 of Brodmann-1909") AnnotationAssertion(Annotation( "BIRNLEX:1775") "area temporalis transversa posterior") AnnotationAssertion(Annotation( "BIRNLEX:1589") "auditory association area") AnnotationAssertion(Annotation( "FMA:68639") "posterior transverse temporal area 42") AnnotationAssertion(Annotation( "BIRNLEX:1589") Annotation( ) "posterior transverse termporal area 42") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:236867") "auditory association cortex") AnnotationAssertion( "UBERON:0006096") AnnotationAssertion(rdfs:label "posterior transverse temporal area 42") SubClassOf(Annotation( "NIFSTD"^^xsd:string) ) # Class: (ventral external arcuate fiber bundle) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:vea") AnnotationAssertion( "BIRNLEX:1628") AnnotationAssertion( "FMA:72631") AnnotationAssertion(Annotation( "BIRNLEX:1628") "UMLS:C0175553") AnnotationAssertion(Annotation( "BIRNLEX:1628") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=797") AnnotationAssertion(Annotation( "BIRNLEX:1628") "ventral external arcuate fiber bundle") AnnotationAssertion(Annotation( "BIRNLEX:1628") "ventral external arcuate fibers") AnnotationAssertion(Annotation( "FMA:72631") "ventral external arcuate fibers") AnnotationAssertion(Annotation( "FMA:72631") "ventral external arcuate tract") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:797") Annotation( ) "fibrae arcuatae externae anteriores") AnnotationAssertion(Annotation( "NeuroNames:797") Annotation( ) "fibrae arcuatae externae ventrales") AnnotationAssertion(Annotation( "NeuroNames:797") Annotation( ) "fibrae circumpyramidales") AnnotationAssertion(Annotation( "NeuroNames:797") Annotation( ) "fibre arcuatae superficiales") AnnotationAssertion( "UBERON:0006097") AnnotationAssertion(rdfs:label "ventral external arcuate fiber bundle") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (basal nuclear complex) AnnotationAssertion(Annotation( "BIRNLEX:1629") "The deep nuclei of telencephalic origin found in the basal region of the forebrain.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:BG") AnnotationAssertion( "BAMS:BNC") AnnotationAssertion( "BIRNLEX:1629") AnnotationAssertion( "EV:0100182") AnnotationAssertion(Annotation( "BIRNLEX:1629") "UMLS:C0004781") AnnotationAssertion(Annotation( "BIRNLEX:1629") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=224") AnnotationAssertion(Annotation( "BIRNLEX:1629") "basal nuclei") AnnotationAssertion(Annotation( "BIRNLEX:1629") "basal nuclei of the forebrain") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BIRNLEX:1629") Annotation( ) "basal ganglia") AnnotationAssertion(Annotation( "NeuroNames:224") "basal ganglia (anatomic)") AnnotationAssertion(Annotation( "NeuroNames:224") Annotation( ) "corpus striatum (Savel'ev)") AnnotationAssertion(Annotation( "NeuroNames:224") Annotation( ) "ganglia basales") AnnotationAssertion( "UBERON:0006098") AnnotationAssertion(rdfs:label "basal nuclear complex") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (Brodmann (1909) area 1) AnnotationAssertion(Annotation( "BIRNLEX:1732") Annotation( "NIFSTD:SumsDB_abbrevSource"^^xsd:string) Annotation( ) "B09-1") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:1732") AnnotationAssertion( "FMA:68597") AnnotationAssertion(Annotation( "BIRNLEX:1732") "UMLS:C1272523") AnnotationAssertion(Annotation( "BIRNLEX:1732") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=1022") AnnotationAssertion(Annotation( "BIRNLEX:1732") "B09-1") AnnotationAssertion(Annotation( ) "BA1") AnnotationAssertion(Annotation( "BIRNLEX:1732") "Brodmann (1909) area 1") AnnotationAssertion(Annotation( "BIRNLEX:1732") "Brodmann area 1") AnnotationAssertion(Annotation( "FMA:68597") "Brodmann's area 1") AnnotationAssertion(Annotation( "FMA:68597") "area 1 of Brodmann") AnnotationAssertion(Annotation( "BIRNLEX:1732") "area 1 of Brodmann-1909") AnnotationAssertion(Annotation( "BIRNLEX:1732") "area postcentralis intermedia") AnnotationAssertion(Annotation( "BIRNLEX:1732") "intermediate postcentral") AnnotationAssertion(Annotation( "FMA:68597") "intermediate postcentral area") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:1022") "area 1 of Brodmann (guenon)") AnnotationAssertion( "UBERON:0006099") AnnotationAssertion(rdfs:label "Brodmann (1909) area 1") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (Brodmann (1909) area 3) AnnotationAssertion(Annotation( "BIRNLEX:1734") Annotation( "NIFSTD:SumsDB_abbrevSource"^^xsd:string) Annotation( ) "B09-3") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:1734") AnnotationAssertion( "FMA:68599") AnnotationAssertion(Annotation( "BIRNLEX:1734") "UMLS:C1272525") AnnotationAssertion(Annotation( "BIRNLEX:1734") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=1006") AnnotationAssertion(Annotation( "BIRNLEX:1734") "B09-3") AnnotationAssertion(Annotation( ) "BA3") AnnotationAssertion(Annotation( "BIRNLEX:1734") "Brodmann (1909) area 3") AnnotationAssertion(Annotation( "BIRNLEX:1734") "Brodmann area 3") AnnotationAssertion(Annotation( "FMA:68599") "Brodmann's area 3") AnnotationAssertion(Annotation( "FMA:68599") "area 3 of Brodmann") AnnotationAssertion(Annotation( "BIRNLEX:1734") "area 3 of Brodmann-1909") AnnotationAssertion(Annotation( "BIRNLEX:1734") "area postcentralis oralis") AnnotationAssertion(Annotation( "BIRNLEX:1734") "rostral postcentral") AnnotationAssertion(Annotation( "FMA:68599") "rostral postcentral area") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:1006") "area 3 of Brodmann (guenon)") AnnotationAssertion( "UBERON:0006100") AnnotationAssertion(rdfs:label "Brodmann (1909) area 3") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (Brodmann (1909) area 24) AnnotationAssertion(Annotation( "BIRNLEX:1755") Annotation( "NIFSTD:SumsDB_abbrevSource"^^xsd:string) Annotation( ) "B09-24") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:ACA") AnnotationAssertion( "BIRNLEX:1755") AnnotationAssertion( "FMA:68621") AnnotationAssertion( "MBA:31") AnnotationAssertion(Annotation( "BIRNLEX:1755") "UMLS:C1272542") AnnotationAssertion(Annotation( "BIRNLEX:1755") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=1007") AnnotationAssertion(Annotation( "BIRNLEX:1755") "B09-24") AnnotationAssertion(Annotation( ) "BA24") AnnotationAssertion(Annotation( "BIRNLEX:1755") "Brodmann (1909) area 24") AnnotationAssertion(Annotation( "BIRNLEX:1755") "Brodmann area 24") AnnotationAssertion(Annotation( "FMA:68621") "area 24 of Brodmann") AnnotationAssertion(Annotation( "BIRNLEX:1755") "area 24 of Brodmann-1909") AnnotationAssertion(Annotation( "BIRNLEX:1755") "area cingularis anterior ventralis") AnnotationAssertion(Annotation( "BIRNLEX:1755") "ventral anterior cingulate") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:1007") "agranular cingulate area") AnnotationAssertion(Annotation( "NeuroNames:1007") "anterior cingulate area") AnnotationAssertion(Annotation( "NeuroNames:1007") "area 24 of Brodmann-1905 (guenon)") AnnotationAssertion(Annotation( "NeuroNames:1007") "brodmann's area 24") AnnotationAssertion(Annotation( "NeuroNames:1007") Annotation( ) "gyrus limbicus anterior") AnnotationAssertion( "UBERON:0006101") AnnotationAssertion(rdfs:label "Brodmann (1909) area 24") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf(Annotation( "BGEE:Ann") ObjectSomeValuesFrom( )) # Class: (Brodmann (1909) area 35) AnnotationAssertion(Annotation( ) "Brodmann area 35, together with Brodmann area 36, is most frequently referred to as perirhinal cortex.") AnnotationAssertion( "Brodmann found a cytoarchitecturally homologous area in the monkey (Cercopithecus), but it was so weakly developed that he omitted it from the cortical map of that species (Brodmann-1909).") AnnotationAssertion(Annotation( "BIRNLEX:1768") Annotation( "NIFSTD:SumsDB_abbrevSource"^^xsd:string) Annotation( ) "B09-35") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:1768") AnnotationAssertion( "BTO:0004356") AnnotationAssertion( "FMA:68632") AnnotationAssertion(Annotation( "BIRNLEX:1768") "UMLS:C1272496") AnnotationAssertion(Annotation( "BIRNLEX:1768") "B09-35") AnnotationAssertion(Annotation( ) "BA35") AnnotationAssertion(Annotation( "BIRNLEX:1768") "Brodmann (1909) area 35") AnnotationAssertion(Annotation( "BIRNLEX:1768") "Brodmann area 35") AnnotationAssertion(Annotation( "BIRNLEX:1768") "Brodmann area 35, perirhinal") AnnotationAssertion(Annotation( "FMA:68632") "Brodmann's area 35") AnnotationAssertion(Annotation( "FMA:68632") "area 35 of Brodmann") AnnotationAssertion(Annotation( "BIRNLEX:1768") "area 35 of Brodmann-1909") AnnotationAssertion(Annotation( "BIRNLEX:1768") "area perirhinalis") AnnotationAssertion(Annotation( "FMA:68632") "perirhinal area 35") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006102") AnnotationAssertion(rdfs:label "Brodmann (1909) area 35") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf(Annotation( "WP"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (Brodmann (1909) area 36) AnnotationAssertion(Annotation( ) "Ectorhinal area 36 is a subdivision of the cytoarchitecturally defined temporal region of cerebral cortex. With its medial boundary corresponding approximately to the rhinal sulcus it is located primarily in the fusiform gyrus. Cytoarchitecturally it is bounded laterally and caudally by the inferior temporal area 20, medially by the perirhinal area 35 and rostrally by the temporopolar area 38 (H) (Brodmann-1909). Together with Brodmann area 35, it comprises the perirhinal cortex.") AnnotationAssertion(Annotation( "BIRNLEX:1769") Annotation( "NIFSTD:SumsDB_abbrevSource"^^xsd:string) Annotation( ) "B09-36") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:1769") AnnotationAssertion( "BTO:0004357") AnnotationAssertion( "DMBA:16086") AnnotationAssertion( "FMA:68633") AnnotationAssertion(Annotation( "BIRNLEX:1769") "UMLS:C1272497") AnnotationAssertion(Annotation( "BIRNLEX:1769") "B09-36") AnnotationAssertion(Annotation( ) "BA36") AnnotationAssertion(Annotation( "BIRNLEX:1769") "Brodmann (1909) area 36") AnnotationAssertion(Annotation( "BIRNLEX:1769") "Brodmann area 36") AnnotationAssertion(Annotation( "FMA:68633") "area 36 of Brodmann") AnnotationAssertion(Annotation( "BIRNLEX:1769") "area 36 of Brodmann-1909") AnnotationAssertion(Annotation( "BIRNLEX:1769") Annotation( ) "area ectorhinalis") AnnotationAssertion(Annotation( "BIRNLEX:1769") "ectorhinal") AnnotationAssertion(Annotation( "FMA:68633") "ectorhinal area 36") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006104") AnnotationAssertion(rdfs:label "Brodmann (1909) area 36") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf(Annotation( "WP"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (obsolete basis modioli) AnnotationAssertion( "BIRNLEX:2522") AnnotationAssertion( "FMA:75640") AnnotationAssertion(Annotation( "FMA:75640") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "basis modioli cochleae") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006105") AnnotationAssertion(rdfs:label "obsolete basis modioli") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (cochlear canal) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:2553") AnnotationAssertion( "EMAPA:35801") AnnotationAssertion( "FMA:75371") AnnotationAssertion( "MA:0003176") AnnotationAssertion(Annotation( "BIRNLEX:2553") "UMLS:C0009198") AnnotationAssertion(Annotation( "BIRNLEX:2553") "UMLS:C0458767") AnnotationAssertion(Annotation( "BIRNLEX:2553") "cochlear canal") AnnotationAssertion(Annotation( "BIRNLEX:2553") "spiral canal of cochlea") AnnotationAssertion(Annotation( "FMA:75371") "wall of cochlea") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "MA:0003176") "spiral vessel") AnnotationAssertion( "UBERON:0006106") AnnotationAssertion(rdfs:label "cochlear canal") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (basolateral amygdaloid nuclear complex) AnnotationAssertion(Annotation( "BIRNLEX:2679") "A set of amygdalar nuclei comprising the lateral nucleus (LA), the basal nucleus (BA), and the accessory basal nuclei (ABN). These nuclei are bordered laterally by the external capsule and medially by the central amygdalar nucleus as well as the amygdalohippocampal area. This definition refers to the rat Basolateral nuclear complex.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:ABL") AnnotationAssertion( "BAMS:BL") AnnotationAssertion( "BAMS:BLA") AnnotationAssertion( "BIRNLEX:2679") AnnotationAssertion( "DHBA:10366") AnnotationAssertion( "FMA:84609") AnnotationAssertion( "PBA:128012678") AnnotationAssertion(Annotation( "BIRNLEX:2679") "UMLS:C0175220") AnnotationAssertion(Annotation( "BIRNLEX:2679") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=244") AnnotationAssertion(Annotation( "BIRNLEX:2679") Annotation( ) "BL") AnnotationAssertion(Annotation( "BIRNLEX:2679") "amygdalar basolateral nucleus") AnnotationAssertion(Annotation( "BIRNLEX:2679") "amygdaloid basolateral complex") AnnotationAssertion(Annotation( "FMA:84016") "amygdaloid basolateral complex") AnnotationAssertion(Annotation( ) "basolateral amygdala") AnnotationAssertion(Annotation( "BIRNLEX:2679") "basolateral amygdaloid nuclear complex") AnnotationAssertion(Annotation( "BIRNLEX:2679") "basolateral nuclear complex") AnnotationAssertion(Annotation( "BIRNLEX:2679") "basolateral nuclear group") AnnotationAssertion(Annotation( "FMA:84016") "basolateral nuclear group") AnnotationAssertion(Annotation( "FMA:84016") "basolateral nuclei of amygdala") AnnotationAssertion(Annotation( "FMA:84609") "basolateral subdivision of amygdala") AnnotationAssertion(Annotation( "BIRNLEX:2679") "pars basolateralis (Corpus amygdaloideum)") AnnotationAssertion(Annotation( "BIRNLEX:2679") "vicarious cortex") AnnotationAssertion(Annotation( "FMA:84016") "vicarious cortex") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "basolateral complex") AnnotationAssertion(Annotation( "FMA:84016") "set of basolateral nuclei of amygdala") AnnotationAssertion( "UBERON:0006107") AnnotationAssertion(rdfs:label "basolateral amygdaloid nuclear complex") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (corticomedial nuclear complex) AnnotationAssertion(Annotation( "BIRNLEX:2680") "These structures are referred to as nuclei but have a layered cortical like structure. These areas include the anterior amygdaloid area, posterior amygdaloid area, the periamygdaloid cortex, and the bed nucleus of the accessory olfactory tract.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:CMA") AnnotationAssertion( "BIRNLEX:2680") AnnotationAssertion( "DHBA:10372") AnnotationAssertion( "FMA:84015") AnnotationAssertion(Annotation( "BIRNLEX:2680") "UMLS:C0175214") AnnotationAssertion(Annotation( "BIRNLEX:2680") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=238") AnnotationAssertion(Annotation( "BIRNLEX:2680") "CMA") AnnotationAssertion(Annotation( "BIRNLEX:2680") "amygdalar corticomedial nucleus") AnnotationAssertion(Annotation( "BIRNLEX:2680") "corticomedial nuclear complex") AnnotationAssertion(Annotation( "BIRNLEX:2680") "corticomedial nuclear group") AnnotationAssertion(Annotation( "FMA:84015") "corticomedial nuclear group") AnnotationAssertion(Annotation( "FMA:84015") "corticomedial nuclei of amygdala") AnnotationAssertion(Annotation( "BIRNLEX:2680") "pars corticomedialis (Corpus amygdaloideum)") AnnotationAssertion(Annotation( "FMA:84015") "set of corticomedial nuclei of amygdala") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:238") Annotation( ) "corpus amygdaloideum pars corticomedialis") AnnotationAssertion(Annotation( "NeuroNames:238") Annotation( ) "corpus amygdaloideum pars olfactoria") AnnotationAssertion( "UBERON:0006108") AnnotationAssertion(rdfs:label "corticomedial nuclear complex") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lateral occipital cortex) AnnotationAssertion(Annotation( "BIRNLEX:735") "Component of the occipital lobe. The rostral and caudal boundaries of the lateral occipital cortex were the superior parietal gyrus and as the last visible portion of occipital cortex respectively. The medial and lateral boundaries were the cuneus/pericalcarine cortex and the inferior temporal/inferior parietal gyri respectively (Christine Fennema-Notestine).") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:LOG") AnnotationAssertion( "BIRNLEX:735") AnnotationAssertion( "FMA:61902") AnnotationAssertion(Annotation( "BIRNLEX:735") "UMLS:C0228228") AnnotationAssertion(Annotation( "BIRNLEX:735") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=155") AnnotationAssertion(Annotation( "FMA:61902") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "gyrus occipitalis lateralis") AnnotationAssertion(Annotation( "FMA:61902") "gyrus occipitalis medius (mai)") AnnotationAssertion(Annotation( "FMA:61902") "gyrus occipitalis secundus") AnnotationAssertion(Annotation( "BIRNLEX:735") "lateral occipital cortex") AnnotationAssertion(Annotation( "BIRNLEX:735") "lateral occipital gyrus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:155") Annotation( ) "gyrus occipitalis medius") AnnotationAssertion(Annotation( "NeuroNames:155") "middle occipital gyrus") AnnotationAssertion( "UBERON:0006114") AnnotationAssertion(rdfs:label "lateral occipital cortex") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (posterior column of fornix) AnnotationAssertion(Annotation( "BIRNLEX:754") "Part of fornix adjacent to the fimbria comprising flattened bands of fibers that extend from the fimbria, running underneath the corpus callosum.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:pfx") AnnotationAssertion( "BIRNLEX:754") AnnotationAssertion( "DHBA:10579") AnnotationAssertion( "FMA:61969") AnnotationAssertion( "HBA:9254") AnnotationAssertion(Annotation( "BIRNLEX:754") "UMLS:C0228288") AnnotationAssertion(Annotation( "FMA:61969") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "crus fornicis") AnnotationAssertion(Annotation( "BIRNLEX:754") "crus of fornix") AnnotationAssertion(Annotation( "FMA:61969") "crus of fornix") AnnotationAssertion(Annotation( "FMA:61969") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "fornix, crus posterius") AnnotationAssertion(Annotation( "BIRNLEX:754") "posterior column of fornix") AnnotationAssertion(Annotation( "FMA:61969") "posterior column of fornix of forebrain") AnnotationAssertion(Annotation( "BIRNLEX:754") "posterior crus of fornix") AnnotationAssertion(Annotation( "FMA:61969") "posterior crus of fornix") AnnotationAssertion(Annotation( "BIRNLEX:754") "posterior pillar of fornix") AnnotationAssertion(Annotation( "FMA:61969") "posterior pillar of fornix") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006115") AnnotationAssertion(rdfs:label "posterior column of fornix") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "NIFSTD"^^xsd:string) ObjectSomeValuesFrom( )) DisjointClasses(Annotation( "NIFSTD"^^xsd:string) ) # Class: (vagal nerve fiber bundle) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:10nf") AnnotationAssertion( "BIRNLEX:765") AnnotationAssertion( "FMA:72628") AnnotationAssertion(Annotation( "BIRNLEX:765") "UMLS:C0175551") AnnotationAssertion(Annotation( "BIRNLEX:765") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=794") AnnotationAssertion(Annotation( "BIRNLEX:765") "central part of vagus nerve") AnnotationAssertion(Annotation( "FMA:72628") "central part of vagus nerve") AnnotationAssertion(Annotation( "BIRNLEX:765") "tenth cranial nerve fibers") AnnotationAssertion(Annotation( "FMA:72628") "tenth cranial nerve fibers") AnnotationAssertion(Annotation( "BIRNLEX:765") "vagal nerve fiber bundle") AnnotationAssertion(Annotation( "BIRNLEX:765") "vagal nerve fibers") AnnotationAssertion(Annotation( "FMA:72628") "vagal nerve fibers") AnnotationAssertion(Annotation( "FMA:72628") "vagal nerve tract") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:794") Annotation( ) "fibrae nervi vagi") AnnotationAssertion( "UBERON:0006116") AnnotationAssertion(rdfs:label "vagal nerve fiber bundle") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (accessory nerve fiber bundle) AnnotationAssertion(Annotation( "BIRNLEX:916") "Fibers of the accessory nerve (11th cranial nerve) contained within the medulla.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:11nf") AnnotationAssertion( "BIRNLEX:916") AnnotationAssertion( "FMA:72626") AnnotationAssertion(Annotation( "BIRNLEX:916") "UMLS:C0175549") AnnotationAssertion(Annotation( "BIRNLEX:916") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=792") AnnotationAssertion(Annotation( "BIRNLEX:916") "accessory nerve fiber bundle") AnnotationAssertion(Annotation( "BIRNLEX:916") "accessory nerve fibers") AnnotationAssertion(Annotation( "FMA:72626") "accessory nerve fibers") AnnotationAssertion(Annotation( "FMA:72626") "accessory nerve tract") AnnotationAssertion(Annotation( "FMA:72626") "eleventh cranial nerve fibers") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:792") Annotation( ) "fibrae nervi accessorius") AnnotationAssertion( "UBERON:0006117") AnnotationAssertion(rdfs:label "accessory nerve fiber bundle") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lamina I of gray matter of spinal cord) AnnotationAssertion(Annotation( "NLXANAT:100203") "Cytoarchitectural part of spinal cord gray matter.") AnnotationAssertion( ) AnnotationAssertion( "FMA:68862") AnnotationAssertion( "NLXANAT:100203") AnnotationAssertion(Annotation( "NLXANAT:100203") "lamina i of gray matter of spinal cord") AnnotationAssertion(Annotation( "FMA:68862") "lamina marginalis") AnnotationAssertion(Annotation( "NLXANAT:100203") "lamina marginalis") AnnotationAssertion(Annotation( "FMA:68862") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "lamina spinalis i") AnnotationAssertion(Annotation( "NLXANAT:100203") "layer of Waldeyer") AnnotationAssertion(Annotation( "FMA:68862") "layer of waldeyer") AnnotationAssertion(Annotation( "NLXANAT:100203") "rexed lamina I") AnnotationAssertion(Annotation( "FMA:68862") "rexed lamina i") AnnotationAssertion(Annotation( "NLXANAT:100203") "rexed layer 1") AnnotationAssertion(Annotation( "NLXANAT:100203") "spinal lamina I") AnnotationAssertion(Annotation( "FMA:68862") "spinal lamina i") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006118") AnnotationAssertion(rdfs:label "lamina I of gray matter of spinal cord") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (subbrachial nucleus) AnnotationAssertion(Annotation( "NLXANAT:1005003") "A group of cells ventral to the nucleus of brachium of inferior colliculus in the mouse (Paxinos-2001).") AnnotationAssertion( ) AnnotationAssertion( "BAMS:SubB") AnnotationAssertion( "DHBA:12290") AnnotationAssertion( "FMA:77494") AnnotationAssertion( "NLXANAT:1005003") AnnotationAssertion(Annotation( "NLXANAT:1005003") "subbrachial nucleus") AnnotationAssertion(Annotation( "FMA:77494") "tegmental area of tsai") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006119") AnnotationAssertion(rdfs:comment "Candidate definition (refers specifically to mouse): \"A group of cells ventral to the nucleus of brachium of inferior colliculus in the mouse (Paxinos-2001).\" [NLXANAT:1005003]") AnnotationAssertion(rdfs:label "subbrachial nucleus") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (superior colliculus superficial gray layer) AnnotationAssertion(Annotation( "NLXANAT:1005034") "Layer of the superior colliculus, lying just deep to the outermost stratum zonale (Carpenter, A Core Text of Neuroanatomy, 3rd ed., 1985, pg 175).") AnnotationAssertion( ) AnnotationAssertion( "BAMS:SCsg") AnnotationAssertion( "BAMS:SuG") AnnotationAssertion( "BAMS:sgr") AnnotationAssertion( "DHBA:12295") AnnotationAssertion( "FMA:72407") AnnotationAssertion( "HBA:9121") AnnotationAssertion( "MBA:842") AnnotationAssertion( "NLXANAT:1005034") AnnotationAssertion(Annotation( ) "lamina II of superior colliculus") AnnotationAssertion(Annotation( "FMA:72407") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "lamina colliculi superioris ii") AnnotationAssertion(Annotation( "FMA:72407") "layer II of superior colliculus") AnnotationAssertion(Annotation( "FMA:72407") "outer gray layer of superior colliculus") AnnotationAssertion(Annotation( "FMA:72407") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "stratum cinereum") AnnotationAssertion(Annotation( "FMA:72407") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "stratum griseum superficiale") AnnotationAssertion(Annotation( "FMA:72407") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "stratum griseum superficiale colliculi superioris") AnnotationAssertion(Annotation( ) "stratum griseum superficiale of superior colliculus") AnnotationAssertion(Annotation( "FMA:72407") "superficial gray layer of superior colliculus") AnnotationAssertion(Annotation( "FMA:72407") "superficial grey layer of superior colliculus") AnnotationAssertion(Annotation( "NLXANAT:1005034") "superior colliculus superficial gray layer") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BAMS:SuG") "superficial gray layer of the superior colliculus") AnnotationAssertion(Annotation( "BAMS:sgr") "superficial grey layer of the superior colliculus") AnnotationAssertion( "UBERON:0006120") AnnotationAssertion(rdfs:label "superior colliculus superficial gray layer") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ) # Class: (hemispheric lobule VIII) AnnotationAssertion(Annotation( ) "The biventer lobule (or biventral lobule) is triangular in shape; its apex points backward, and is joined by the gray band to the pyramid. The lateral border is separated from the inferior semilunar lobule by the postpyramidal fissure. The base is directed forward, and is on a line with the anterior border of the tonsil, and is separated from the flocculus by the postnodular fissure.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:BvL") AnnotationAssertion( "FMA:72526") AnnotationAssertion( "NLXANAT:20081211") AnnotationAssertion(Annotation( "NLXANAT:20081211") "biventer 1 (HVIII)") AnnotationAssertion(Annotation( "FMA:72526") "biventer lobule") AnnotationAssertion(Annotation( "FMA:72526") "biventral lobule") AnnotationAssertion(Annotation( "NLXANAT:20081211") "biventral lobule") AnnotationAssertion(Annotation( "FMA:72526") "biventral lobule [h VIII]") AnnotationAssertion(Annotation( "FMA:72526") "cuneiform lobe") AnnotationAssertion(Annotation( "FMA:72526") "dorsal parafloccularis [h VIII b]") AnnotationAssertion(Annotation( "FMA:72526") "dorsal paraflocculus") AnnotationAssertion(Annotation( "NLXANAT:20081211") "hemispheric lobule VIII") AnnotationAssertion(Annotation( "NLXANAT:20081211") "lobulus biventer") AnnotationAssertion(Annotation( "FMA:72526") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "lobulus biventer [h viii]") AnnotationAssertion(Annotation( "FMA:72526") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "lobulus biventralis") AnnotationAssertion(Annotation( "FMA:72526") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "lobulus parafloccularis dorsalis [h viii b]") AnnotationAssertion(Annotation( "NLXANAT:20081211") "paraflocculus dorsalis") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:72526") "lobule H VIII of Larsell") AnnotationAssertion(Annotation( "FMA:72526") "lobule VIII of hemisphere of cerebellum") AnnotationAssertion( "UBERON:0006121") AnnotationAssertion(rdfs:label "hemispheric lobule VIII") SubClassOf( ) SubClassOf( ) # Class: (obsolete retrorubral area) AnnotationAssertion( "FMA:66581") AnnotationAssertion( "NLXANAT:20090301") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NLXANAT:20090301") "A8") AnnotationAssertion( "UBERON:0006122") AnnotationAssertion(rdfs:comment "Made obsolete as it grouped two unrelated classes") AnnotationAssertion(rdfs:label "obsolete retrorubral area") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (horizontal limb of the diagonal band) AnnotationAssertion( ) AnnotationAssertion( "BAMS:HDB") AnnotationAssertion( "FMA:77611") AnnotationAssertion( "NLXANAT:20090303") AnnotationAssertion(Annotation( "FMA:77611") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "crus horizontale striae diagonalis") AnnotationAssertion(Annotation( "NLXANAT:20090303") "diagonal band horizontal limb") AnnotationAssertion(Annotation( "NLXANAT:20090303") "hDBB") AnnotationAssertion(Annotation( "FMA:77611") "horizontal limb of diagonal band") AnnotationAssertion(Annotation( "NLXANAT:20090303") "horizontal limb of the diagonal band") AnnotationAssertion(Annotation( "NLXANAT:20090303") "horizontal limb of the diagonal band of Broca") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BAMS:HDB") "nucleus of the horizontal limb of the diagonal band") AnnotationAssertion( "UBERON:0006123") AnnotationAssertion(rdfs:label "horizontal limb of the diagonal band") SubClassOf( ) # Class: (vertical limb of the diagonal band) AnnotationAssertion( ) AnnotationAssertion( "BAMS:VDB") AnnotationAssertion( "FMA:77612") AnnotationAssertion( "NLXANAT:20090304") AnnotationAssertion(Annotation( "FMA:77612") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "crus verticale striae diagonalis") AnnotationAssertion(Annotation( "FMA:77612") "vertical limb of diagonal band") AnnotationAssertion(Annotation( "NLXANAT:20090304") "vertical limb of the diagonal band") AnnotationAssertion(Annotation( "NLXANAT:20090304") "vertical limb of the diagonal band of Broca") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BAMS:VDB") "nucleus of the vertical limb of the diagonal band") AnnotationAssertion( "UBERON:0006124") AnnotationAssertion(rdfs:label "vertical limb of the diagonal band") SubClassOf( ) # Class: (subdivision of diagonal band) AnnotationAssertion( "FMA:77610") AnnotationAssertion( "NLXANAT:20090302") AnnotationAssertion(Annotation( "FMA:77610") "diagonal band subdivision") AnnotationAssertion(Annotation( "NLXANAT:20090302") "regional part of diagonal band") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006125") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "subdivision of diagonal band") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "NIFSTD"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (funiculus of spinal cord) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A funiculus of neuraxis that is part of a spinal cord.") AnnotationAssertion( ) AnnotationAssertion( "FMA:77460") AnnotationAssertion(Annotation( "FMA:77460") "spinal cord funiculus") AnnotationAssertion(Annotation( "FMA:77460") "white column of spinal cord") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006127") AnnotationAssertion(rdfs:label "funiculus of spinal cord") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (funiculus of neuraxis) AnnotationAssertion(Annotation( ) "The cerebrospinal nerves consist of numerous nerve fibers collected together and enclosed in membranous sheaths. A small bundle of fibers, enclosed in a tubular sheath, is called a funiculus; if the nerve is of small size, it may consist only of a single funiculus; but if large, the funiculi are collected together into larger bundles or fasciculi, which are bound together in a common membranous investment. Examples include: Anterior funiculus of the spinal cord Lateral funiculus of the spinal cord Posterior funiculus of the spinal cord Funiculus solitarius of the medulla Funiculus separans.") AnnotationAssertion( ) AnnotationAssertion( "FMA:76738") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006133") AnnotationAssertion(rdfs:label "funiculus of neuraxis") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (nerve fiber) AnnotationAssertion(Annotation( ) "A threadlike extension of a nerve cell and consists of an axon and myelin sheath (if it is myelinated) in the nervous system. There are nerve fibers in the central nervous system and peripheral nervous system. A nerve fiber may be myelinated and/or unmyelinated. In the central nervous system (CNS), myelin by oligodendroglia cells is formed. Schwann cells form myelin in the peripheral nervous system (PNS). Schwann cells also make a thin covering in an axon without myelin (in the PNS). A peripheral nerve fiber contains an axon, myelin sheath, schwann cells and its endoneurium. There are no endoneurium and schwann cells in the central nervous system.") AnnotationAssertion( "neurofibrous") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:nfi") AnnotationAssertion( "FMA:5914") AnnotationAssertion( "MESH:A08.663.542") AnnotationAssertion(Annotation( "FMA:5914") "nerve fibre") AnnotationAssertion(Annotation( "FMA:5914") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "neurofibra") AnnotationAssertion(Annotation( "FMA:5914") "neurofibrum") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BAMS:nfi") Annotation( ) "nerve fibers") AnnotationAssertion(Annotation( ) Annotation( ) "neurofibra") AnnotationAssertion( "UBERON:0006134") AnnotationAssertion(rdfs:label "nerve fiber") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (myelinated nerve fiber) AnnotationAssertion(Annotation( "ncithesaurus:Myelinated_Nerve_Fiber") "Axons of neurons encased in a lipoproteinaceous material called myelin. (MeSH).") AnnotationAssertion( "consider adding link to UBERON:0002316 ! white matter of neuraxis") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "http://www1.pbrc.hawaii.edu/~danh/MyelinEvolution/evolution.html, http://journals.cambridge.org/action/displayAbstract?fromPage=online&aid=6134604, Wikipedia:Myelin#Invertebrate_myelin") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:5915") AnnotationAssertion( "GAID:745") AnnotationAssertion( "MESH:A08.663.542.512") AnnotationAssertion( "NCIT:C12627") AnnotationAssertion(Annotation( "ncithesaurus:Myelinated_Nerve_Fiber") "UMLS:C0027750") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006135") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "myelinated nerve fiber") SubClassOf( ) DisjointClasses( ) # Class: (unmyelinated nerve fiber) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:5916") AnnotationAssertion( "GAID:767") AnnotationAssertion( "MESH:A08.663.542.756") AnnotationAssertion( "NCIT:C33835") AnnotationAssertion(Annotation( "ncithesaurus:Unmyelinated_Nerve_Fiber") "UMLS:C0501409") AnnotationAssertion(Annotation( "FMA:5916") "non-myelinated nerve fiber") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006136") AnnotationAssertion(rdfs:label "unmyelinated nerve fiber") SubClassOf( ) # Class: (proper palmar digital artery) AnnotationAssertion(Annotation( ) "The proper palmar digital arteries travel along the sides of the phalanges (along the contiguous sides of the index, middle, ring, and little fingers), each artery lying just below its corresponding digital nerve. Alternative names for these arteries are: proper volar digital arteries, collateral digital arteries, arteriae digitales palmares propriae, or aa. digitales volares propriae. They anastomose freely in the subcutaneous tissue of the finger tips and by smaller branches near the interphalangeal joints. Each also gives off a couple of dorsal branches which anastomose with the dorsal digital arteries, and supply the soft parts on the back of the second and third phalanges, including the matrix of the fingernail. The proper palmar digital artery for the medial side of the little finger arises directly from the ulnar artery deep to the palmaris brevis muscle, but the rest arise from the common palmar digital arteries.") AnnotationAssertion(Annotation( "MA"^^xsd:string) "the MA term, even though plural, represents the singular, as it is an isa child of artery") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37218") AnnotationAssertion( "FMA:70804") AnnotationAssertion( "MA:0001959") AnnotationAssertion(Annotation( "FMA:70804") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "arteriae digitales palmares propriae") AnnotationAssertion(Annotation( "MA:0001959") "proper palmal digital arteries") AnnotationAssertion(Annotation( "MA:0001959") "proper palmar digital arteries") AnnotationAssertion(Annotation( "FMA:70804") "proper palmar digital arteries set") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "arteriae digitales palmares propriae") AnnotationAssertion(Annotation( ) "proper volar digital arteries") AnnotationAssertion(Annotation( ) "proper volar digital artery") AnnotationAssertion(Annotation( "FMA:70804") "set of proper palmar digital arteries") AnnotationAssertion( "UBERON:0006137") AnnotationAssertion(rdfs:label "proper palmar digital artery") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/a/a9/Gray1237.svg"^^xsd:anyURI) SubClassOf( ) # Class: (plantar digital artery) AnnotationAssertion( ) AnnotationAssertion( "FMA:43971") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006138") AnnotationAssertion(rdfs:label "plantar digital artery") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (plantar digital vein) AnnotationAssertion(Annotation( ) "The plantar digital veins arise from plexuses on the plantar surfaces of the digits, and, after sending intercapitular veins to join the dorsal digital veins, unite to form four metatarsal veins.") AnnotationAssertion( ) AnnotationAssertion( "FMA:44517") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "venae digitales plantares") AnnotationAssertion( "UBERON:0006139") AnnotationAssertion(rdfs:label "plantar digital vein") SubClassOf( ) # Class: (palmar digital vein) AnnotationAssertion(Annotation( ) "The palmar digital veins (or volar digital veins) on each finger are connected to the dorsal digital veins by oblique intercapitular veins. Some sources distinguish between the 'proper palmar digital veins', which are more distal, and the 'common palmar digital veins', which are more proximal.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:70895") AnnotationAssertion(Annotation( "FMA:70895") Annotation( ) "palmar digital veins") AnnotationAssertion(Annotation( "FMA:70895") Annotation( ) "palmar digital veins set") AnnotationAssertion(Annotation( "FMA:70895") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "venae digitales palmares") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:70895") "set of palmar digital veins") AnnotationAssertion(Annotation( ) Annotation( ) "venae digitales palmares") AnnotationAssertion(Annotation( ) "volar digital veins") AnnotationAssertion( "UBERON:0006140") AnnotationAssertion(rdfs:label "palmar digital vein") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/b/ba/Gray574.png"^^xsd:anyURI) SubClassOf( ) # Class: (palmar digital artery) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006141") AnnotationAssertion(rdfs:label "palmar digital artery") SubClassOf( ) # Class: (common plantar digital vein) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37221") AnnotationAssertion( "MA:0002134") AnnotationAssertion(Annotation( "MA:0002134") "common plantar vein") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006142") AnnotationAssertion(rdfs:label "common plantar digital vein") SubClassOf( ) # Class: (proper plantar digital vein) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37230") AnnotationAssertion( "MA:0002138") AnnotationAssertion(Annotation( "MA:0002138") "proper plantar vein") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006143") AnnotationAssertion(rdfs:label "proper plantar digital vein") SubClassOf( ) # Class: (medial plantar digital vein) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37171") AnnotationAssertion( "MA:0002172") AnnotationAssertion(Annotation( "MA:0002172") "medial plantar vein") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006144") AnnotationAssertion(rdfs:label "medial plantar digital vein") SubClassOf( ) # Class: (dorsal digital artery of pes) AnnotationAssertion(Annotation( ) "The dorsal digital arteries of foot are small arteries which supply the toes.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:44660") AnnotationAssertion(Annotation( "FMA:44660") "dorsal digital artery of foot") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "arteriae digitales dorsales pedis") AnnotationAssertion( "UBERON:0006145") AnnotationAssertion(rdfs:label "dorsal digital artery of pes") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/e/ee/Gray553.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) # Class: (dorsal digital artery of manus) AnnotationAssertion(Annotation( ) "Dorsal digital arteries arise from the bifurcation of dorsal metacarpal arteries. They travel along the sides and dorsal aspects of the phalanges of the middle finger, ring finger, and little finger. They communicate with the proper palmar digital arteries. They run with the dorsal digital nerves of ulnar nerve and dorsal digital nerves of radial nerve.") AnnotationAssertion(Annotation( ) "dorsal digital artery") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "dorsal digital artery of hand") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "arteriae digitales dorsales manus") AnnotationAssertion( "UBERON:0006146") AnnotationAssertion(rdfs:label "dorsal digital artery of manus") SubClassOf( ) SubClassOf( ) # Class: (dorsal digital artery) AnnotationAssertion( "Note Wikipedia article refers to manual dorsal digital artery") AnnotationAssertion( ) AnnotationAssertion( "FMA:70801") AnnotationAssertion(Annotation( "FMA:70801") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "arteriae digitales dorsales") AnnotationAssertion(Annotation( "FMA:70801") "dorsal digital arteries") AnnotationAssertion(Annotation( "FMA:70801") "dorsal digital arteries set") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:70801") "set of dorsal digital arteries") AnnotationAssertion( "UBERON:0006163") AnnotationAssertion(rdfs:label "dorsal digital artery") SubClassOf( ) # Class: (forelimb common dorsal digital arteries) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37209") AnnotationAssertion( "MA:0001954") AnnotationAssertion(Annotation( "NCBITaxon:8782"^^xsd:string) Annotation( "OBOL:automatic"^^xsd:string) Annotation( ) "wing common dorsal digital arteries") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006164") AnnotationAssertion(rdfs:label "forelimb common dorsal digital arteries") SubClassOf( ) # Class: (median dorsal digital artery for digit 1) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37637") AnnotationAssertion( "MA:0001955") AnnotationAssertion(Annotation( "MA:0001955") "median dorsal digital artery for digit 01") AnnotationAssertion(Annotation( ) Annotation( ) "median dorsal digital artery for digit I") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006165") AnnotationAssertion(rdfs:label "median dorsal digital artery for digit 1") SubClassOf( ) # Class: (lateral dorsal digital artery for digit 5) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37636") AnnotationAssertion( "MA:0001956") AnnotationAssertion(Annotation( "MA:0001956") "lateral dorsal digital artery for digit 05") AnnotationAssertion(Annotation( ) Annotation( ) "lateral dorsal digital artery for digit V") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006166") AnnotationAssertion(rdfs:label "lateral dorsal digital artery for digit 5") SubClassOf( ) # Class: (forelimb proper dorsal digital arteries) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37211") AnnotationAssertion( "MA:0001958") AnnotationAssertion(Annotation( "NCBITaxon:8782"^^xsd:string) Annotation( "OBOL:automatic"^^xsd:string) Annotation( ) "wing proper dorsal digital arteries") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006167") AnnotationAssertion(rdfs:label "forelimb proper dorsal digital arteries") SubClassOf( ) # Class: (hindlimb common dorsal digital arteries) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37213") AnnotationAssertion( "MA:0001965") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006168") AnnotationAssertion(rdfs:label "hindlimb common dorsal digital arteries") SubClassOf( ) # Class: (hindlimb proper dorsal digital arteries) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37212") AnnotationAssertion( "MA:0001967") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006169") AnnotationAssertion(rdfs:label "hindlimb proper dorsal digital arteries") SubClassOf( ) # Class: (mesonephric capsule) AnnotationAssertion(Annotation( ) Annotation( "GO:0061285") Annotation( "GOC:mtg_kidney_jan10") "The mesonephric capsule is the tough fibrous layer surrounding the mesonephros, covered in a thick layer of perinephric adipose tissue.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006170") AnnotationAssertion(rdfs:label "mesonephric capsule") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (renal sinus) AnnotationAssertion(Annotation( ) "A hollowed out area on the medial margin of the kidney. The renal sinus opens at the renal hilum; it contains the renal aa. and vv., major calyces and renal pelvis, perirenal fat.") AnnotationAssertion( ) AnnotationAssertion( "FMA:15611") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006171") AnnotationAssertion(rdfs:label "renal sinus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (rectal diverticulum) AnnotationAssertion(Annotation( "GO:0039009") "The rectal diverticulum is an outgrowth of the cloaca and links the pronephric kidney to the exterior.") AnnotationAssertion( "XAO:0001015") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "XAO:0001015") Annotation( ) "rectal diverticula") AnnotationAssertion( "UBERON:0006172") AnnotationAssertion(rdfs:label "rectal diverticulum") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pronephric proximal tubule) AnnotationAssertion(Annotation( "GO:0039011") "pronephros proximal tubule") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006173") AnnotationAssertion(rdfs:label "pronephric proximal tubule") SubClassOf( ) SubClassOf( ) # Class: (pronephric sinus) AnnotationAssertion(Annotation( "GO:0039012") "The pronephric sinus is an ill-defined capillary network that lies between the pronephric tubules.") AnnotationAssertion( "TODO - check relationship to renal sinus, improve definition") AnnotationAssertion( "AAO:0011092") AnnotationAssertion( "XAO:0000385") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006174") AnnotationAssertion(rdfs:label "pronephric sinus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pronephric distal tubule) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006175") AnnotationAssertion(rdfs:label "pronephric distal tubule") SubClassOf( ) SubClassOf( ) # Class: (mesonephric glomerular mesangium) AnnotationAssertion(Annotation( "GO:0061247") "The mesonephric glomerular mesangium is the thin membrane connective tissue composed of mesangial cells in the mesonephros, which helps to support the capillary loops in a renal glomerulus.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006182") AnnotationAssertion(rdfs:label "mesonephric glomerular mesangium") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (mesonephric glomerular capillary) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006183") AnnotationAssertion(rdfs:label "mesonephric glomerular capillary") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (mesonephric connecting tubule) AnnotationAssertion(Annotation( "GO:0061272") "The mesonephric connecting tubule is a tubular segment of the mesonephric nephron; it connects the distal tubule to the collecting duct in the mesonephros.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006189") AnnotationAssertion(rdfs:label "mesonephric connecting tubule") SubClassOf( ) SubClassOf( ) SubClassOf( ) # Class: (mesonephric distal tubule) AnnotationAssertion(Annotation( "GO:0061273") "The mesonephric distal tubule is a mesonephric nephron tubule that begins at the macula densa and extends to the mesonephric connecting tubule.") AnnotationAssertion(Annotation( "ZFA"^^xsd:string) "ZFA has terms for developing tubule") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006190") AnnotationAssertion(rdfs:label "mesonephric distal tubule") SubClassOf( ) SubClassOf( ) SubClassOf( ) # Class: (mesonephric proximal tubule) AnnotationAssertion(Annotation( "GO:0061275") "The mesonephric proximal tubule extends from the capsule to the distal tubule.") AnnotationAssertion(Annotation( "ZFA"^^xsd:string) "ZFA has terms for developing tubule") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006192") AnnotationAssertion(rdfs:label "mesonephric proximal tubule") SubClassOf( ) SubClassOf( ) SubClassOf( ) # Class: (renal sinus of right kidney) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A renal sinus that is part of a right kidney.") AnnotationAssertion( "FMA:17621") AnnotationAssertion(Annotation( "FMA:17621") "right renal sinus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006194") AnnotationAssertion(rdfs:label "renal sinus of right kidney") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (renal sinus of left kidney) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A renal sinus that is part of a left kidney.") AnnotationAssertion( "FMA:17622") AnnotationAssertion(Annotation( "FMA:17622") "left renal sinus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006195") AnnotationAssertion(rdfs:label "renal sinus of left kidney") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (mesonephric sinus) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A renal sinus that is part of a mesonephros.") AnnotationAssertion( "TODO - check relationship to renal sinus, add definition") AnnotationAssertion( "AAO:0011063") AnnotationAssertion( "XAO:0000381") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006196") AnnotationAssertion(rdfs:label "mesonephric sinus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (auricular vein) AnnotationAssertion(Annotation( ) "Any vein serving the ear region.") AnnotationAssertion( "In humans this refers to either the anterior or posterior auricular vein, passing in front of or behind the ear. This class also groups other auricular veins, including the greater, ventral, central auricular nerves. These may exhibit different branching structures. In the pig, the external jugular branches to the maxillary to the caudal auricular to the middle auricular, then onto various unique patterns") AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37136") AnnotationAssertion( "MA:0003054") AnnotationAssertion( "NCIT:C77673") AnnotationAssertion(Annotation( "ncithesaurus:Auricular_Vein") "UMLS:C2698201") AnnotationAssertion(Annotation( ) "vena auriculares") AnnotationAssertion(Annotation( ) "venae auriculares") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006197") AnnotationAssertion(rdfs:label "auricular vein") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "cjm"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (dorsal intercostal artery) AnnotationAssertion(Annotation( ) "The highest intercostal artery (supreme intercostal artery, superior intercostal artery) is an artery in the human body that usually gives rise to the first and second posterior intercostal arteries, which supply blood to their corresponding intercostal space. It usually arises from the costocervical trunk, which is a branch of the subclavian artery.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37078") AnnotationAssertion( "FMA:76998") AnnotationAssertion( "MA:0001943") AnnotationAssertion(Annotation( ) Annotation( "FMA:76998") "superior intercostal artery") AnnotationAssertion(Annotation( ) Annotation( "FMA:76998") "supreme intercostal artery") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "arteria intercostalis suprema") AnnotationAssertion(Annotation( ) "dorsal branch of superior intercostal artery") AnnotationAssertion( "UBERON:0006198") AnnotationAssertion(rdfs:comment "classes unified on basis of spatial anatomy ontology synonyms") AnnotationAssertion(rdfs:label "dorsal intercostal artery") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/7/75/Gray530.png"^^xsd:anyURI) SubClassOf( ) # Class: (posterior auricular vein) AnnotationAssertion(Annotation( ) "The posterior auricular vein begins upon the side of the head, in a plexus which communicates with the tributaries of the occipital vein and superficial temporal veins. It descends behind the auricula, and joins the posterior division of the posterior facial vein to form the external jugular. It receive the stylomastoid vein, and some tributaries from the cranial surface of the auricula.") AnnotationAssertion( "check placement of MA class") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37138") AnnotationAssertion( "FMA:50851") AnnotationAssertion( "MA:0002090") AnnotationAssertion( "NCIT:C33349") AnnotationAssertion(Annotation( "ncithesaurus:Posterior_Auricular_Vein") "UMLS:C0226544") AnnotationAssertion(Annotation( "FMA:50851") "posterior auricular vein") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "venae auricularis posterior") AnnotationAssertion( "UBERON:0006199") AnnotationAssertion(rdfs:label "posterior auricular vein") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/8/8c/Gray557.png"^^xsd:anyURI) SubClassOf( ) # Class: (caudal humeral circumflex vein) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37472") AnnotationAssertion( "FMA:71216") AnnotationAssertion( "MA:0002091") AnnotationAssertion(Annotation( "FMA:71216") "posterior circumflex humeral vein") AnnotationAssertion(Annotation( "FMA:71216") "posterior humeral circumflex vein") AnnotationAssertion(Annotation( "FMA:71216") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "vena circumflexa humeri posterior") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006200") AnnotationAssertion(rdfs:comment "classes unified on basis of spatial anatomy ontology synonyms") AnnotationAssertion(rdfs:label "caudal humeral circumflex vein") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA/obol"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA/obol"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (obsolete dorsal cerebral vein) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006201") AnnotationAssertion(rdfs:comment "classes unified on basis of spatial anatomy ontology synonyms") AnnotationAssertion(rdfs:label "obsolete dorsal cerebral vein") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete ventral labial vein) AnnotationAssertion( "MA:0002260") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006202") AnnotationAssertion(rdfs:comment "Was obsoleted as it grouped a lip structure with an unknown MA vein, which be a genital vein") AnnotationAssertion(rdfs:label "obsolete ventral labial vein") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (conchal part of pinna) AnnotationAssertion(Annotation( "FMA:61006") "concha") AnnotationAssertion( ) AnnotationAssertion( "FMA:61006") AnnotationAssertion( "NCIT:C32362") AnnotationAssertion(Annotation( "ncithesaurus:Concha") "UMLS:C0229316") AnnotationAssertion(Annotation( "FMA:61006") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "concha auriculae") AnnotationAssertion(Annotation( "FMA:61006") "concha of auricle") AnnotationAssertion(Annotation( "FMA:61006") "concha of pinna") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006203") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "conchal part of pinna") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (inguinal ligament) AnnotationAssertion(Annotation( ) "A band running from the pubic tubercle to the anterior superior iliac spine. Its anatomy is very important for operating on hernia patients. It forms the base of the inguinal canal through which an indirect inguinal hernia may develop. The inguinal ligament runs from the anterior superior iliac spine of the ilium to the pubic tubercle of the pubic bone. It is formed by the external abdominal oblique aponeurosis and is continuous with the fascia lata of the thigh.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:19855") AnnotationAssertion(Annotation( ) Annotation( "FMA:19855") Annotation( ) "Poupart's ligament") AnnotationAssertion(Annotation( "FMA:19855") "Vesalius' ligament") AnnotationAssertion(Annotation( ) Annotation( "FMA:19855") Annotation( ) "fallopian ligament") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006204") AnnotationAssertion(rdfs:label "inguinal ligament") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pectineal ligament) AnnotationAssertion(Annotation( ) "An extension of the lacunar ligament that runs on the pectineal line of the pubic bone.") AnnotationAssertion( "we include a disjointness axiom to avoid confusion that may arise from the synonyms 'ligamentum pectineale' and 'ligamentum pectinum' (eye trabecular meshwork)") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:20188") AnnotationAssertion(Annotation( "FMA:20188") "Cooper's ligament (groin)") AnnotationAssertion(Annotation( ) "inguinal ligament of Cooper") AnnotationAssertion(Annotation( "FMA:20188") "ligamentum pectineale") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006205") AnnotationAssertion(rdfs:label "pectineal ligament") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (iridocorneal angle) AnnotationAssertion(Annotation( "MP:0004221") "Acute angle occurring between the iris and the cornea at the periphery of the anterior chamber of the eye[MP].") AnnotationAssertion( ) AnnotationAssertion( "FMA:58577") AnnotationAssertion(Annotation( "FMA:58577") "anterior chamber angle") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006206") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "iridocorneal angle") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (aortico-pulmonary spiral septum) AnnotationAssertion(Annotation( ) Annotation( "MP:0010650") "The spiral septum that separates the truncus arteriosus into a ventral pulmonary trunk and the dorsal aorta[MP]. The aorticopulmonary septum is developmentally formed from neural crest, specifically the cardiac neural crest, and actively separates the aorta and pulmonary arteries and fuses with the interventricular septum within the heart during development. The actual mechanism of septation of the outflow tract is poorly understood, but is recognized as a dynamic process with contributions from contractile, hemodynamic, and extracellular matrix interactions.") AnnotationAssertion( "UBERON:0005999") AnnotationAssertion( ) AnnotationAssertion( "CALOHA:TS-2409") AnnotationAssertion( "EHDAA2:0000136") AnnotationAssertion( "EHDAA:2592") AnnotationAssertion( "EMAPA:16827") AnnotationAssertion( "VHOG:0000502") AnnotationAssertion(Annotation( ) "aortico-pulmonary septum") AnnotationAssertion(Annotation( ) "aorticopulmonary septum") AnnotationAssertion(Annotation( ) Annotation( ) "septum aorticopulmonale") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "aortic septum") AnnotationAssertion(Annotation( ) "spiral septum") AnnotationAssertion( "UBERON:0006207") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "aortico-pulmonary spiral septum") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/b/b9/Gray470.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (auditory hillocks) AnnotationAssertion(Annotation( ) "A collection of protruberances derived from pharyngeal arches 1 and 2 that develop into the folds of the pinna and gradually shift upwards and backwards to their final position on the head.") AnnotationAssertion( "EHDAA2:0000155") AnnotationAssertion( "EHDAA:4685") AnnotationAssertion( "EMAPA:17280") AnnotationAssertion( "NCIT:C34110") AnnotationAssertion( "VHOG:0001364") AnnotationAssertion( "auditory hillock of Hiss") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "VHOG:0001364") Annotation( ) "auditory tubercles") AnnotationAssertion( "auricular hillock") AnnotationAssertion( "hillock of Hiss") AnnotationAssertion( "UBERON:0006208") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "auditory hillocks") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (basioccipital cartilage element) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A basioccipital endochondral element that is composed primarily of cartilage tissue.") AnnotationAssertion( "EHDAA2:0000164") AnnotationAssertion( "EHDAA:7141") AnnotationAssertion( "EMAPA:18337") AnnotationAssertion( "VHOG:0001124") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006209") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "basioccipital cartilage element") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (body-wall mesenchyme) AnnotationAssertion( "EHDAA2:0000179") AnnotationAssertion( "EHDAA:3217") AnnotationAssertion( "EMAPA:16893") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006210") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "body-wall mesenchyme") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (buccopharyngeal membrane) AnnotationAssertion(Annotation( "MP:0012521") "The thin bilaminar membrane derived from the prechordal plate that is devoid of mesoderm and formed by the apposition of the stomodeal ectoderm with the foregut endoderm; after the embryonic head fold has evolved it lies at the caudal limit of the stomodeum, forming a septum between the primitive mouth and pharynx; the membrane eventually disappears, and thus a communication is established between the mouth and the future pharynx.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0000189") AnnotationAssertion( "EHDAA:536") AnnotationAssertion( "EMAPA:16259") AnnotationAssertion( "FMA:313607") AnnotationAssertion( "VHOG:0000380") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "MP:0012521") "oral membrane") AnnotationAssertion(Annotation( "MP:0012521") "oral plate") AnnotationAssertion(Annotation( ) "oropharyngeal membrane") AnnotationAssertion(Annotation( "MP:0012521") Annotation( ) "pharyngeal membrane") AnnotationAssertion( "UBERON:0006211") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "buccopharyngeal membrane") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/9/93/Gray977.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (bulbo-ventricular groove) AnnotationAssertion(Annotation( ) Annotation( ) Annotation( "BGEE:ANiknejad") "Depression at base of developing heart that contains a population of cardiomyocytes that migrate and contribute to the interventricular septum.") AnnotationAssertion( "EHDAA2:0000195") AnnotationAssertion( "EHDAA:766") AnnotationAssertion( "EMAPA:16693") AnnotationAssertion( "VHOG:0001405") AnnotationAssertion(Annotation( "EMAPA:16693") "bulbo-ventricular sulcus") AnnotationAssertion(Annotation( "VHOG:0001405") "bulboventricular groove") AnnotationAssertion(Annotation( "EMAPA:16693") "ependymal groove") AnnotationAssertion(Annotation( "EMAPA:16693") "ependymal sulcus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "EHDAA2:0000195") "interventricular sulcus") AnnotationAssertion( "UBERON:0006212") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "bulbo-ventricular groove") AnnotationAssertion(rdfs:seeAlso "https://github.com/obophenotype/uberon/issues/347"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (carpus cartilage element) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A cartilaginous condensation that has the potential to develop into a carpal bone.") AnnotationAssertion( "EHDAA2:0000221") AnnotationAssertion( "EHDAA:8544") AnnotationAssertion( "EMAPA:18102") AnnotationAssertion( "VHOG:0001123") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "EMAPA:18102") "carpal cartilage condensation") AnnotationAssertion( "UBERON:0006213") AnnotationAssertion(rdfs:label "carpus cartilage element") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (carpus pre-cartilage condensation) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A pre-cartilage condensation that has the potential to develop into a carpal bone.") AnnotationAssertion( "EHDAA2:0000222") AnnotationAssertion( "EHDAA:6324") AnnotationAssertion( "EMAPA:17724") AnnotationAssertion( "VHOG:0000955") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "EMAPA:17724") "carpal pre-cartilage condensation") AnnotationAssertion( "UBERON:0006214") AnnotationAssertion(rdfs:label "carpus pre-cartilage condensation") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (rhombic lip) AnnotationAssertion(Annotation( "MGI:anna"^^xsd:string) Annotation( "MP:0012525") "The posterior section of the developing metencephalon recognized transiently within the vertebrate embryo; the rhombic lip extends posteriorly from the roof of the fourth ventricle to dorsal neuroepithelial cell and can be divided into eight structural units based on rhombomeres 1-8 (r1-r8), recognized at early stages of hindbrain development; producing granule cells and five brainstem nuclei, the rhombic lip plays an important role in developing a complex cerebellar neural system.") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0001440") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "The interface between the dorsal neuroepithelium and the roofplate of the fourth ventricle. The source of a number of migratory neuron populations of the hindbrain.[TAO]") AnnotationAssertion( "UBERON:0013163") AnnotationAssertion( ) AnnotationAssertion( "DHBA:10664") AnnotationAssertion( "EHDAA2:0000231") AnnotationAssertion( "EMAPA:17074") AnnotationAssertion( "TAO:0001440") AnnotationAssertion( "XAO:0004135") AnnotationAssertion( "ZFA:0001440") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "MGI:anna"^^xsd:string) "cerebellar anlage") AnnotationAssertion(Annotation( "EMAPA:17074") "cerebellar primordium") AnnotationAssertion(Annotation( "EHDAA2:0000231") Annotation( "EMAPA:17074") "cerebellum primordium") AnnotationAssertion(Annotation( "EMAPA:17074") "dorsal part of alar plate of metencephalon") AnnotationAssertion(Annotation( ) "future cerebellum") AnnotationAssertion(Annotation( "MGI:anna"^^xsd:string) "presumptive cerebellum") AnnotationAssertion(Annotation( "MGI:anna"^^xsd:string) "rostral rhombic lip") AnnotationAssertion( "UBERON:0006215") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "rhombic lip") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) Annotation( "Wikipedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (cervical sinus of His) AnnotationAssertion(Annotation( ) Annotation( ) "A temporary depression caudal to the second pharyngeal arch, containing the succeeding pharyngeal arches; it is overgrown by the second pharyngeal arch and closes off as the cervical vesicle. This sinus is bounded in front by the hyoid arch, and behind by the thoracic wall.") AnnotationAssertion( "it is ultimately obliterated by the fusion of its walls.") AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0000078") AnnotationAssertion( "EHDAA:5105") AnnotationAssertion( "EHDAA:6534") AnnotationAssertion( "EMAPA:16884") AnnotationAssertion( "RETIRED_EHDAA2:0000239") AnnotationAssertion(Annotation( "EHDAA2:0000078") "cervical sinus") AnnotationAssertion(Annotation( ) Annotation( ) "sinus cervicalis") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "EMAPA:16884") "retro-hyoid depression") AnnotationAssertion(Annotation( ) Annotation( ) "sinus cervicalis") AnnotationAssertion( "UBERON:0006216") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "cervical sinus of His") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/2/20/Kiemenbogen.jpg"^^xsd:anyURI) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (cloacal membrane) AnnotationAssertion(Annotation( ) Annotation( "MP:0011837") Annotation( "MP:anna"^^xsd:string) "The membrane that covers the embryonic cloaca, formed by the union of proctodeal (anal pit) ectoderm and cloacal endoderm, with no intervening mesoderm; the urorectal septum joins the cloacal membrane and divides it into an anal membrane and a urogenital membrane; the point where the urorectal septum intersects the cloacal membrane is the future site of the perineal body; proliferation of mesoderm and ectoderm around the cloacal membrane produces primordial tissues of the external genitalia in both sexes: the genital tubercle, genital folds, and genital swellings.") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001198") Annotation( "VHOG"^^xsd:string) Annotation( ) "A membrane that separates the proctodeum and the hindgut in the early embryo. [Evolution, Fourth_Edition_(2006)_McGraw-Hill, Function, Vertebrates:_Comparative_Anatomy, p.497, see_Kardong_KV][VHOG]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001198") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "PMID:11830557 De Santa Barbara P, Roberts DJ, Tail gut endoderm and gut/genitourinary/tail development: a new tissue-specific role for Hoxa13. Development (2002)") "In mammals, the cloaca exists as an embryonic structure that undergoes septation to become distinct urethral, anal, and genital orifices.[well established][VHOG]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0000257") AnnotationAssertion( "EHDAA:214") AnnotationAssertion( "EHDAA:2933") AnnotationAssertion( "EMAPA:16832") AnnotationAssertion( "FMA:295525") AnnotationAssertion( "NCIT:C34128") AnnotationAssertion(Annotation( "ncithesaurus:Cloacal_Membrane") "UMLS:C0231056") AnnotationAssertion( "VHOG:0001198") AnnotationAssertion( "embryonic cloacal membrane") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "membrana cloacalis") AnnotationAssertion( "UBERON:0006217") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "cloacal membrane") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/d/d2/Gray991.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "Wikipedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (common atrial chamber) AnnotationAssertion( "EHDAA:1267") AnnotationAssertion( "EMAPA:16342") AnnotationAssertion( "RETIRED_EHDAA2:0000268") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006218") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "common atrial chamber") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (deltoid pre-muscle mass) AnnotationAssertion( "EHDAA2:0000340") AnnotationAssertion( "EHDAA:6002") AnnotationAssertion( "EMAPA:17749") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006219") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "deltoid pre-muscle mass") SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (diencephalic part of interventricular foramen) AnnotationAssertion( "EHDAA2:0000384") AnnotationAssertion( "EHDAA:3476") AnnotationAssertion( "EMAPA:16901") AnnotationAssertion( "VHOG:0000808") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "EMAPA:16901") "ependymal foramen") AnnotationAssertion( "UBERON:0006220") AnnotationAssertion(rdfs:label "diencephalic part of interventricular foramen") SubClassOf(Annotation( "EHDAA2"^^xsd:string) ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (future diencephalon) AnnotationAssertion(Annotation( ) Annotation( "UBERON:cjm"^^xsd:string) "The foremost region of the future forebrain that develops into the diencephalon.") AnnotationAssertion( "EFO:0003442") AnnotationAssertion( "EHDAA2:0000600") AnnotationAssertion( "EHDAA:844") AnnotationAssertion( "EMAPA:16514") AnnotationAssertion( "RETIRED_EHDAA2:0000386") AnnotationAssertion( "TAO:0000574") AnnotationAssertion( "ZFA:0000574") AnnotationAssertion(Annotation( "TAO:0000574") "presumptive diencephalon") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006222") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "future diencephalon") SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (dorsal meso-oesophagus) AnnotationAssertion( "EHDAA:2945") AnnotationAssertion( "EMAPA:16704") AnnotationAssertion( "MA:0001570") AnnotationAssertion( "RETIRED_EHDAA2:0000412") AnnotationAssertion(Annotation( "MA:0001570") "dorsal meso-esophagus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006223") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "dorsal meso-oesophagus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (elbow joint primordium) AnnotationAssertion( "EHDAA2:0000431") AnnotationAssertion( "EHDAA:8483") AnnotationAssertion( "EMAPA:17710") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006224") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "elbow joint primordium") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (endolymphatic appendage) AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000373") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( ) "An outgrowth of the otic vesicle that forms the endolymphatic duct and sac during embryonic development. [TFD][VHOG]") AnnotationAssertion( "EHDAA2:0000437") AnnotationAssertion( "EMAPA:16994") AnnotationAssertion( "MA:0000241") AnnotationAssertion( "VHOG:0000373") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006226") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "endolymphatic appendage") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (ethmoid bone primordium) AnnotationAssertion( "consider obsoleting, the ethmoid is endochondral?") AnnotationAssertion( "EHDAA2:0000456") AnnotationAssertion( "EHDAA:8363") AnnotationAssertion( "EMAPA:18023") AnnotationAssertion( "FMA:312597") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006227") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "ethmoid bone primordium") SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "AAO"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (exoccipital pre-cartilage condensation) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An exoccipital endochondral element that is composed primarily of a pre-cartilage condensation.") AnnotationAssertion( "EHDAA2:0000457") AnnotationAssertion( "EHDAA:8355") AnnotationAssertion( "EMAPA:18014") AnnotationAssertion( "VHOG:0000963") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006228") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "exoccipital pre-cartilage condensation") SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (extrinsic ocular pre-muscle mass) AnnotationAssertion( "EHDAA2:0000483") AnnotationAssertion( "EHDAA:2925") AnnotationAssertion( "EMAPA:17845") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006230") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "extrinsic ocular pre-muscle mass") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) Annotation( "ISBN:0781772214") ObjectSomeValuesFrom( )) # Class: (facial bone primordium) AnnotationAssertion( "check this for developmental relationships") AnnotationAssertion( "EHDAA2:0000488") AnnotationAssertion( "EHDAA:9552") AnnotationAssertion( "EMAPA:18024") AnnotationAssertion(Annotation( "EHDAA2:0000488") "facial bones primordia") AnnotationAssertion( "uberon") AnnotationAssertion( "facial skeleton primordium") AnnotationAssertion( "viscerocranium primordium") AnnotationAssertion( "UBERON:0006231") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "facial bone primordium") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ) # Class: (facio-acoustic VII-VIII preganglion complex) AnnotationAssertion( "EHDAA:1477") AnnotationAssertion( "EMAPA:16660") AnnotationAssertion( "RETIRED_EHDAA2:0000496") AnnotationAssertion( "VHOG:0000715") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "EMAPA:16660") "facio-acoustic preganglion complex") AnnotationAssertion( "UBERON:0006232") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "facio-acoustic VII-VIII preganglion complex") SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (female genital tubercle) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A differentiated genital tubercle that is part of a female reproductive system.") AnnotationAssertion( "EHDAA:8118") AnnotationAssertion( "EMAPA:18680") AnnotationAssertion( "RETIRED_EHDAA2:0000500") AnnotationAssertion( "VHOG:0000666") AnnotationAssertion(Annotation( "EMAPA:18680") "genital tubercle of female") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006233") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "female genital tubercle") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (femur pre-cartilage condensation) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A femur endochondral element that is composed primarily of a pre-cartilage condensation.") AnnotationAssertion( "EHDAA2:0000508") AnnotationAssertion( "EMAPA:17502") AnnotationAssertion( "VHOG:0000951") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "EMAPA:17502") "femoral pre-cartilage condensation") AnnotationAssertion( "UBERON:0006234") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "femur pre-cartilage condensation") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (foregut-midgut junction) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An anatomical junctions that overlaps the foregut and midgut.") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000291") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0521617147 Stevens CE and Hume ID, Comparative physiology of the vertebrate digestive system (2004) p.11") "Although all vertebrates have a digestive tract and accessory glands, various parts of this system are not necessarily homologous, analogous, or even present in all species. Therefore, broad comparisons can be best made under the listings of headgut, foregut, midgut, pancreas and biliary system, hindgut.[well established][VHOG]") AnnotationAssertion( "EHDAA2:0000569") AnnotationAssertion( "EHDAA:526") AnnotationAssertion( "EMAPA:16363") AnnotationAssertion( "VHOG:0000291") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006235") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "foregut-midgut junction") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (tetrapod frontal bone primordium) AnnotationAssertion( "EHDAA2:0000577") AnnotationAssertion( "EHDAA:9540") AnnotationAssertion( "EMAPA:18017") AnnotationAssertion( "FMA:312589") AnnotationAssertion(Annotation( "EHDAA2:0000577") "frontal bone primordium") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006236") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "tetrapod frontal bone primordium") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (future brain) AnnotationAssertion(Annotation( "NLX:94995") "The embryonic precursor of the brain.") AnnotationAssertion(Annotation( ) "The embryonic precursor of the brain and the set of mature brain structures that derive from it (CUMBO)") AnnotationAssertion( "BAMS:Enc") AnnotationAssertion( "BTO:0004726") AnnotationAssertion( "EFO:0003431") AnnotationAssertion( "EHDAA:300") AnnotationAssertion( "EHDAA:830") AnnotationAssertion( "EMAPA:16089") AnnotationAssertion( "FMA:312967") AnnotationAssertion( "RETIRED_EHDAA2:0000591") AnnotationAssertion( "TAO:0000146") AnnotationAssertion( "ZFA:0000146") AnnotationAssertion(Annotation( "TAO:0000146") "brain rudiment") AnnotationAssertion(Annotation( "ZFA:0000146") "presumptive brain") AnnotationAssertion(Annotation( "NLX:94995") "encephalon") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0004726") "embryonic brain") AnnotationAssertion( "UBERON:0006238") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "future brain") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (future central tendon) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A tendon that has the potential to develop into a central tendon.") AnnotationAssertion( "The cranial part of the septum transversum gives rise to the central tendon of the diaphragm and is the origin of the myoblasts that invade the pleuroperitoneal folds resulting in the formation of the muscular diaphragm.") AnnotationAssertion( "EHDAA2:0000593") AnnotationAssertion( "EHDAA:4118") AnnotationAssertion( "EMAPA:25035") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "cranial derivative of septum transversum") AnnotationAssertion(Annotation( ) "cranial part of septum transversum") AnnotationAssertion( "UBERON:0006239") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "future central tendon") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "mesenchyme") Annotation( "cranial part") Annotation( "Wikipedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (future forebrain) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A presumptive structure that has the potential to develop into a forebrain.") AnnotationAssertion( "TODO. Add relationships to neural plate (both ZFA and EMAPA time this with the neural plate)") AnnotationAssertion( ) AnnotationAssertion( "BAMS:Pros") AnnotationAssertion( "EFO:0003423") AnnotationAssertion( "EHDAA2:0000661") AnnotationAssertion( "EHDAA:2643") AnnotationAssertion( "EMAPA:16640") AnnotationAssertion( "TAO:0000062") AnnotationAssertion( "ZFA:0000062") AnnotationAssertion( "future prosencephalon") AnnotationAssertion(Annotation( "ZFA:0000062") "presumptive forebrain") AnnotationAssertion(Annotation( "TAO:0000062") "presumptive prosencephalon") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "EHDAA2:0000661") "prosencephalon") AnnotationAssertion( "UBERON:0006240") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "future forebrain") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (future spinal cord) AnnotationAssertion( "EFO:0003438") AnnotationAssertion( "EHDAA2:0000674") AnnotationAssertion( "EHDAA:898") AnnotationAssertion( "EMAPA:16092") AnnotationAssertion( "EMAPA:16755") AnnotationAssertion( "TAO:0000417") AnnotationAssertion( "ZFA:0000417") AnnotationAssertion(Annotation( "ZFA:0000417") "presumptive spinal cord") AnnotationAssertion(Annotation( "TAO:0000417") "presumptive spinal cord neural keel") AnnotationAssertion(Annotation( "TAO:0000417") "presumptive spinal cord neural plate") AnnotationAssertion(Annotation( "TAO:0000417") "presumptive spinal cord neural rod") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006241") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "future spinal cord") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (gall bladder primordium) AnnotationAssertion(Annotation( "ISBN:0815318960") Annotation( "XAO:0004205") "A sac-like cavity ventral to the liver, lying in the sub-mesodermal space and closed by a thin sheet of ectodermal cells, from which the future gall bladder develops.") AnnotationAssertion( "EHDAA2:0000700") AnnotationAssertion( "EHDAA:3047") AnnotationAssertion( "EMAPA:16713") AnnotationAssertion( "XAO:0004205") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006242") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "gall bladder primordium") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "cjm"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EMAPA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (glossopharyngeal IX preganglion) AnnotationAssertion( "EHDAA:1479") AnnotationAssertion( "EMAPA:16661") AnnotationAssertion( "RETIRED_EHDAA2:0000713") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "EMAPA:16661") "glossopharyngeal preganglion") AnnotationAssertion( "UBERON:0006243") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "glossopharyngeal IX preganglion") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (hip joint primordium) AnnotationAssertion( "EHDAA2:0000785") AnnotationAssertion( "EHDAA:8462") AnnotationAssertion( "EMAPA:17739") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006244") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "hip joint primordium") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (humerus cartilage element) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A humerus endochondral element that is composed primarily of cartilage tissue.") AnnotationAssertion( "EHDAA2:0000787") AnnotationAssertion( "EHDAA:6240") AnnotationAssertion( "EMAPA:17713") AnnotationAssertion( "VHOG:0001120") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "EMAPA:17713") "humeral cartilage condensation") AnnotationAssertion( "UBERON:0006245") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "humerus cartilage element") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (humerus pre-cartilage condensation) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A humerus endochondral element that is composed primarily of a pre-cartilage condensation.") AnnotationAssertion( "EHDAA2:0000788") AnnotationAssertion( "EHDAA:4192") AnnotationAssertion( "EMAPA:17427") AnnotationAssertion( "VHOG:0000950") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "EMAPA:17427") "humeral pre-cartilage condensation") AnnotationAssertion( "UBERON:0006246") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "humerus pre-cartilage condensation") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (iliac pre-cartilage condensation) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An iliac endochondral element that is composed primarily of a pre-cartilage condensation.") AnnotationAssertion( "EHDAA2:0000809") AnnotationAssertion( "EHDAA:9568") AnnotationAssertion( "EMAPA:18029") AnnotationAssertion( "VHOG:0000964") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006247") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "iliac pre-cartilage condensation") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (incus pre-cartilage condensation) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An incus endochondral element that is composed primarily of a pre-cartilage condensation.") AnnotationAssertion( "in EHDAA2 this develops from both mandibular and maxillary mesenchyme. We have still to extend homology relationships from quadrate/incus to their ontogenic precursors (") AnnotationAssertion( "EHDAA2:0000813") AnnotationAssertion( "EHDAA:9024") AnnotationAssertion( "EMAPA:17825") AnnotationAssertion( "VHOG:0000957") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006248") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "incus pre-cartilage condensation") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "EHDAA2-generalized") ObjectSomeValuesFrom( )) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (infundibular recess of 3rd ventricle) AnnotationAssertion(Annotation( ) Annotation( "MGI:anna"^^xsd:string) "A funnel-shaped diverticulum that extends downward from the anterior aspect of the floor of the third ventricle into the infundibulum of the hypophysis; the embryonic structure gives rise the neural component of the pituitary (pas nervosa).") AnnotationAssertion( "in FMA this is a cavity, whereas in EHDAA2 it is an epithelial sac") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:IRe") AnnotationAssertion( "BAMS:V3ir") AnnotationAssertion( "EHDAA2:0000827") AnnotationAssertion( "EHDAA:4479") AnnotationAssertion( "EMAPA:16899") AnnotationAssertion( "EMAPA_RETIRED:16648") AnnotationAssertion( "FMA:78456") AnnotationAssertion(Annotation( "FMA:78456") "infundibular recess") AnnotationAssertion(Annotation( "FMA:78456") "infundibular recess of third ventricle") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) Annotation( ) "recessus infundibularis") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) Annotation( ) "recessus infundibuli") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BAMS:IRe") "infundibular reccess") AnnotationAssertion(Annotation( ) Annotation( ) "recessus infundibuli") AnnotationAssertion(Annotation( "BAMS:V3ir") "third ventricle infundibular recess") AnnotationAssertion( "UBERON:0006250") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "infundibular recess of 3rd ventricle") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/7/75/Gray654.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "EMAPA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EMAPA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (interparietal bone primordium) AnnotationAssertion( "EHDAA2:0000881") AnnotationAssertion( "EMAPA:18018") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006251") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "interparietal bone primordium") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (intersubcardinal venous anastomosis) AnnotationAssertion( "EHDAA2:0000883") AnnotationAssertion( "EHDAA:3452") AnnotationAssertion( "EMAPA:16828") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006252") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "intersubcardinal venous anastomosis") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (embryonic intraretinal space) AnnotationAssertion(Annotation( "VHOG:0000534") "The space separating the outer pigment epithelium and the inner neural retina of the optic cup and of the retina.") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000534") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( ) "The space separating the outer pigment epithelium and the inner neural retina of the optic cup and of the retina. [TFD][VHOG]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000534") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0030223693 Liem KF, Bemis WE, Walker WF, Grande L, Functional Anatomy of the Vertebrates: An Evolutionary Perspective (2001) p.429"^^xsd:string) "(...) an essentially similar sequence of events occurs during the embryonic development of the vertebrate eye. The eye initially develops as a single median evagination of the diencephalon that soon bifurcates to form the paired optic vesicles. As each optic vesicle grows towards the body surface, its proximal part narrows as the optic stalk, and its distal part invaginates to form a two-layered optic cup. (...) The outer layer of the optic cup becomes the pigment layer of the retina, whereas the inner layer differentiates into the photoreceptive cells and neuronal layers of the retina.[well established][VHOG]") AnnotationAssertion( "EHDAA2:0000889") AnnotationAssertion( "EHDAA:4761") AnnotationAssertion( "EMAPA:16676") AnnotationAssertion( "EMAPA:17170") AnnotationAssertion( "VHOG:0000534") AnnotationAssertion(Annotation( "EHDAA2:0000889") "intraretinal space") AnnotationAssertion(Annotation( "EMAPA:16676") "intraretinal space of optic cup") AnnotationAssertion(Annotation( "EMAPA:17170") "intraretinal space of retina") AnnotationAssertion(Annotation( "VHOG:0000534") "retina intraretinal space") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006253") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "embryonic intraretinal space") SubClassOf(Annotation( "EHDAA2"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (ischial cartilage element) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An ischial endochondral element that is composed primarily of cartilage tissue.") AnnotationAssertion( "EHDAA2:0000890") AnnotationAssertion( "EHDAA:9570") AnnotationAssertion( "EMAPA:26930") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "EMAPA:26930") "ischial cartilage condensation") AnnotationAssertion( "UBERON:0006254") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "ischial cartilage element") SubClassOf(Annotation( "EHDAA2"^^xsd:string) ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (ischial pre-cartilage condensation) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An ischial endochondral element that is composed primarily of a pre-cartilage condensation.") AnnotationAssertion( "EHDAA2:0000891") AnnotationAssertion( "EHDAA:7153") AnnotationAssertion( "EMAPA:18348") AnnotationAssertion( "VHOG:0000962") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006255") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "ischial pre-cartilage condensation") SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (knee joint primordium) AnnotationAssertion( "EHDAA2:0000897") AnnotationAssertion( "EHDAA:8467") AnnotationAssertion( "EMAPA:17740") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006256") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "knee joint primordium") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (laryngotracheal groove) AnnotationAssertion(Annotation( ) Annotation( ) "A groove in the floor of the pharynx formed from the ventral diverticulum of endoderm that arises from the floor of the foregut caudal to the pharynx. This structure is the precursor for the larynx and trachea[WP,edited].") AnnotationAssertion( "Note we currently have pharynx as part of the upper respiratory tract - separate by development?") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001404") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "PMID:15817505 Warburton D, Bellusci S, De Langhe S, Del Moral PM, Fleury V, Mailleux A, Tefft D, Unbekandt M, Wang K, Shi W, Molecular mechanisms of early lung specification and branching morphogenesis. Pediatric Research (2005)") "Lung development begins with the appearance of the laryngotracheal groove, which is a small diverticulum that arises from the floor of the primitive pharynx at E9 in mouse and 4 wk in human.[well established][VHOG]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0004073") AnnotationAssertion( "EHDAA:1005") AnnotationAssertion( "EMAPA:16739") AnnotationAssertion( "NCIT:C34198") AnnotationAssertion( "RETIRED_EHDAA2:0000909") AnnotationAssertion(Annotation( "ncithesaurus:Laryngotracheal_Tube") "UMLS:C1283960") AnnotationAssertion( "VHOG:0001404") AnnotationAssertion(Annotation( "EHDAA2:0004073") "laryngo-tracheal groove") AnnotationAssertion(Annotation( ) Annotation( ) "sulcus laryngotrachealis") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "laryngo-tracheal tube") AnnotationAssertion( "laryngotracheal endoderm") AnnotationAssertion( "UBERON:0006257") AnnotationAssertion(rdfs:label "laryngotracheal groove") SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (lens pit) AnnotationAssertion(Annotation( ) "A pitlike depression in the ectoderm of the lens placode where the primordial lens is developing[TFD].") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000806") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( ) "A pitlike depression in the ectoderm of the lens placode where the primordial lens is developing. [TFD][VHOG]") AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0000981") AnnotationAssertion( "EHDAA:3809") AnnotationAssertion( "EMAPA:16799") AnnotationAssertion( "NCIT:C34201") AnnotationAssertion(Annotation( "ncithesaurus:Lens_Pit") "UMLS:C1517769") AnnotationAssertion( "VHOG:0000806") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006259") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "lens pit") SubClassOf(Annotation( "EHDAA2"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lingual swellings) AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000449") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( ) "Primordium of the tongue; the median swelling and the distal and proximal swellings arise from the ventral aspect of the stomodeum. [TFD][VHOG]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000449") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "DOI:10.1046/j.1469-7580.2002.00073.x Iwasaki S, Evolution of the structure and function of the vertebrate tongue. J Anat (2002)") "Most adult amphibians have a tongue, as do all known reptiles, birds and mammals. Thus it is likely that the tongue appeared with the establishment of tetrapods and this structure seems to be related, to some extant, to the terrestrial lifestyle.[well established][VHOG]") AnnotationAssertion( "EHDAA2:0000996") AnnotationAssertion( "EMAPA:17186") AnnotationAssertion( "VHOG:0000449") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "EHDAA2:0000996") "lingual swelling") AnnotationAssertion( "UBERON:0006260") AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "the collection consisting of the two lateral swellings and the medial swelling") AnnotationAssertion(rdfs:label "lingual swellings") SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ) SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (male genital tubercle) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A differentiated genital tubercle that is part of a male reproductive system.") AnnotationAssertion( "EHDAA:8138") AnnotationAssertion( "EMAPA:17969") AnnotationAssertion( "RETIRED_EHDAA2:0001048") AnnotationAssertion( "VHOG:0000667") AnnotationAssertion(Annotation( "EMAPA:17969") "genital tubercle of male") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "EMAPA:17969") "penis anlage") AnnotationAssertion( "UBERON:0006261") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "male genital tubercle") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (malleus pre-cartilage condensation) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A malleus endochondral element that is composed primarily of a pre-cartilage condensation.") AnnotationAssertion( "EHDAA2:0001055") AnnotationAssertion( "EHDAA:9026") AnnotationAssertion( "EMAPA:17826") AnnotationAssertion( "VHOG:0000958") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006262") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "malleus pre-cartilage condensation") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (Meckel's cartilage pre-cartilage condensation) AnnotationAssertion( "NC contributes in EHDAA2. editor note: TODO use EHDAA2 structure") AnnotationAssertion( "EHDAA2:0001074") AnnotationAssertion( "EMAPA:17358") AnnotationAssertion( "VHOG:0001121") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006263") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "Meckel's cartilage pre-cartilage condensation") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (mouth-foregut junction) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An anatomical junctions that overlaps the mouth and foregut.") AnnotationAssertion( "EHDAA:534") AnnotationAssertion( "EMAPA:16258") AnnotationAssertion( "RETIRED_EHDAA2:0001205") AnnotationAssertion( "VHOG:0000592") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006264") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "mouth-foregut junction") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) # Class: (mural trophectoderm) AnnotationAssertion(Annotation( ) "Trophectoderm that surrounds blastocyst cavity.") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000597") Annotation( "VHOG"^^xsd:string) Annotation( ) "The part of the trophectoderm which surrounds the blastocoelic cavity. [See_Kaufman_MH_and_Bard_JBL, The_anatomical_basis_of_mouse_development_(1999)_San_Diego:_Academic_Press, p.10][VHOG]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000597") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0721676685 Romer AS, Parsons T, Vertebrate body (1977) p.105-106") "(...) the trophoblast develops rapidly so that contact may be made with the maternal uterine tissues when conditions are appropriate. We have here an excellent example of an embryonic adaptation, the development of a structure never present in either adult or embryo of 'lower' vertebrates.[well established][VHOG]") AnnotationAssertion( "EHDAA2:0001206") AnnotationAssertion( "EHDAA:58") AnnotationAssertion( "EMAPA:16047") AnnotationAssertion( "VHOG:0000597") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "VHOG:0000597") "mural trophoblast") AnnotationAssertion( "UBERON:0006265") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "mural trophectoderm") SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ) SubClassOf(Annotation( "EMAPA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (nasolacrimal groove) AnnotationAssertion(Annotation( ) Annotation( ) "Groove between maxillary prominence and lateral nasal process.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0001238") AnnotationAssertion( "EHDAA:4770") AnnotationAssertion( "EMAPA:16679") AnnotationAssertion( "FMA:300055") AnnotationAssertion( "NCIT:C34218") AnnotationAssertion(Annotation( "ncithesaurus:Nasolacrimal_Groove") "UMLS:C1513875") AnnotationAssertion( "VHOG:0001307") AnnotationAssertion(Annotation( "EMAPA:16679") "naso-lacrimal groove") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "s. lacrimalis maxillae") AnnotationAssertion( "UBERON:0006266") AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "On the nasal surface of the body of the maxilla, in front of the opening of the sinus is a deep groove, the lacrimal groove (or lacrimal sulcus), which is converted into the nasolacrimal canal, by the lacrimal bone and inferior nasal concha; this canal opens into the inferior meatus of the nose and transmits the nasolacrimal duct[WP] See also: oblique facial cleft") AnnotationAssertion(rdfs:label "nasolacrimal groove") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/3/3f/Gray163.png"^^xsd:anyURI) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (notochordal plate) AnnotationAssertion(Annotation( "VHOG:0001212") "The notochordal plate is the dorsal part of the notochordal process when the ventral portion breaks down. It is continuous laterally with the endoderm that composes the roof of the primitive foregut and is in contact dorsally with the neural tube. The folding off of the notochordal plate gives rise to the notochord.") AnnotationAssertion( "TODO - check ordering; awaiting confirmation from JB") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001212") Annotation( "VHOG"^^xsd:string) Annotation( ) "The notochordal plate is the dorsal part of the notochordal process when the ventral portion breaks down. It is continuous laterally with the endoderm that composes the roof of the primitive foregut and is in contact dorsally with the neural tube. The folding off of the notochordal plate gives rise to the notochord. [Carson_JL, Dehart_DB, Developmental_Dynamics_(1994)_201:_260-278, Gesteland_K_and_Schoenwolf_GC, Inagaki_T, Morphogenesis_of_the_murine_node_and_notochordal_plate, The_prechordal_plate, Vrablic_T, see_Mueller_F_and_O'Rahilly_R, the_rostral_end_of_the_notochord_and_nearby_median_features_in_staged_human_embryos._Cells_Tissues_Organs_(2003)_173:_1-20_and_Sulik_K][VHOG]") AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0001278") AnnotationAssertion( "EHDAA:264") AnnotationAssertion( "EMAPA:16101") AnnotationAssertion( "NCIT:C34231") AnnotationAssertion(Annotation( "ncithesaurus:Notochordal_Plate") "UMLS:C1518429") AnnotationAssertion( "VHOG:0001212") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006267") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "notochordal plate") SubClassOf(Annotation( "EHDAA2"^^xsd:string) ) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (notochordal process) AnnotationAssertion(Annotation( ) "A midline cellular cord formed from the migration of mesenchymal cells from the primitive knot.") AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0001279") AnnotationAssertion( "EHDAA:224") AnnotationAssertion( "EMAPA:16102") AnnotationAssertion( "FMA:293135") AnnotationAssertion( "NCIT:C34232") AnnotationAssertion(Annotation( "ncithesaurus:Notochordal_Process") "UMLS:C1518430") AnnotationAssertion( "VHOG:0001213") AnnotationAssertion( "uberon") AnnotationAssertion( "chordamesoderm") AnnotationAssertion( "presumptive notochord") AnnotationAssertion( "UBERON:0006268") AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "The notochordal process grows cranially until it reaches the prechordal plate, the future site of the mouth. In this area the ectoderm is attached directly to the endoderm without intervening mesoderm. This area is known as the oropharyngeal membrane, and it will break down to become the mouth. At the other end of the primitive streak the ectoderm is also fused directly to the endoderm; this is known as the cloacal membrane (proctodeum), or primordial anus.") AnnotationAssertion(rdfs:label "notochordal process") SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (optic pit) AnnotationAssertion(Annotation( "VHOG:0001162") "A small indentation in the central part of the optic placode.") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001162") Annotation( "VHOG"^^xsd:string) Annotation( ) "A small indentation in the central part of the optic placode. [157-169, Mueller_F_and_ObRahilly_R, The_first_appearance_of_the_neural_tube_and_optic_primordium_in_the_human_embryo_at_stage_10._Anatomy_and_Embryology_(1985)_172][VHOG]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001162") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0030223693 Liem KF, Bemis WE, Walker WF, Grande L, Functional Anatomy of the Vertebrates: An Evolutionary Perspective (2001) p.429, DOI:10.1146/annurev.cellbio.17.1.255 Chow RL and Lang RA, Early eye development in vertebrates. Annual Review of Cell and Developmental Biology (2001)") "(...) an essentially similar sequence of events occurs during the embryonic development of the vertebrate eye. The eye initially develops as a single median evagination of the diencephalon that soon bifurcates to form the paired optic vesicles (reference 1); The first morphological sign of eye development in vertebrates is the bilateral evagination of diencephalon in the early neurula. In mammals, this is marked by the appearance of the optic pit, whereas in fish and amphibians a bulging of the optic primordia is observed. Continued evagination of the optic primordia leads to the formation of the optic vesicles (reference 2).[well established][VHOG]") AnnotationAssertion( "EHDAA2:0004433") AnnotationAssertion( "EHDAA:944") AnnotationAssertion( "EMAPA:16199") AnnotationAssertion( "EMAPA:16325") AnnotationAssertion( "RETIRED_EHDAA2:0001316") AnnotationAssertion( "VHOG:0001162") AnnotationAssertion(Annotation( "EHDAA2:0004433") "optic sulcus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "EMAPA:16199") "optic evagination") AnnotationAssertion( "UBERON:0006270") AnnotationAssertion(rdfs:comment "the pit deepens to form the optic vesicle.") AnnotationAssertion(rdfs:label "optic pit") SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (orbital fissure) AnnotationAssertion(Annotation( ) "Either of two openings transmitting nerves and blood vessels to or from the orbit.") AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0001328") AnnotationAssertion( "EHDAA:10648") AnnotationAssertion( "EMAPA:18717") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006271") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "orbital fissure") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (oronasal cavity) AnnotationAssertion(Annotation( ) "In humans, the oronasal membrane ruptures during the seventh week, producing a single, large oronasal cavity") AnnotationAssertion( "EHDAA2:0001331") AnnotationAssertion( "EHDAA:5882") AnnotationAssertion( "EMAPA:17200") AnnotationAssertion( "VHOG:0001352") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006272") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "oronasal cavity") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (otic pit) AnnotationAssertion(Annotation( "ISBN:0-683-40008-8"^^xsd:string) Annotation( "MP:0011172") "The pair of depressions of thickened otic placode epithelium, that further develops into the otic vesicles.") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001147") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( ) "A depression appearing in each otic placode, marking the beginnning of embryonic development of the internal ear. [TFD][VHOG]") AnnotationAssertion( "UBERON:0009123") AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0001336") AnnotationAssertion( "EHDAA:929") AnnotationAssertion( "EMAPA:16536") AnnotationAssertion( "FMA:302911") AnnotationAssertion( "NCIT:C34238") AnnotationAssertion( "VHOG:0001147") AnnotationAssertion(Annotation( "NCBIBook:NBK53175") "otic cup") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006273") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "otic pit") SubClassOf(Annotation( "EHDAA2"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (tetrapod parietal bone primordium) AnnotationAssertion( "EHDAA2:0001404") AnnotationAssertion( "EHDAA:9544") AnnotationAssertion( "EMAPA:18019") AnnotationAssertion( "FMA:312593") AnnotationAssertion(Annotation( "EHDAA2:0001404") "parietal bone primordium") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006274") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "tetrapod parietal bone primordium") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pericardio-peritoneal canal) AnnotationAssertion(Annotation( "ISBN:0124020607") Annotation( "VHOG:0001498") "Each of the canals that connects the pericardial cavity with the peritoneal cavity and becomes a pleural cavity.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0001440") AnnotationAssertion( "EHDAA:636") AnnotationAssertion( "EMAPA:16282") AnnotationAssertion( "NCIT:C34246") AnnotationAssertion(Annotation( "ncithesaurus:Pericardioperitoneal_Canal") "UMLS:C1283967") AnnotationAssertion( "VHOG:0001498") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "VHOG:0001498") "pericardio-peritoneal channel") AnnotationAssertion( "UBERON:0006275") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "pericardio-peritoneal canal") SubClassOf( ) SubClassOf(Annotation( "EMAPA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (perioptic mesenchyme) AnnotationAssertion( "EHDAA:4751") AnnotationAssertion( "EMAPA:17167") AnnotationAssertion( "RETIRED_EHDAA2:0001444") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006276") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "perioptic mesenchyme") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pleuropericardial canals) AnnotationAssertion( "EHDAA2:0001479") AnnotationAssertion( "EHDAA:4122") AnnotationAssertion( "EMAPA:17704") AnnotationAssertion( "VHOG:0001497") AnnotationAssertion(Annotation( "VHOG:0001497") "pleuropericardial canal") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "VHOG:0001497") "pleuropericardial channel") AnnotationAssertion( "UBERON:0006277") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "pleuropericardial canals") SubClassOf( ) # Class: (pleuropericardial folds) AnnotationAssertion(Annotation( "ISBN:0124020607") Annotation( "VHOG:0001499") "Each of the folds that grow out from the lateral part of the body wall. They fuse and meet with the dorsal and ventral mesentery of the foregut, separating the pleural cavities from the pericardial cavity.") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001499") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0471090588 Hildebrand M, Analysis of vertebrate structure (1983) p.205-206") "In hagfishes a transverse septum extends upward from the ventral body wall posterior to the heart, partly separating an anterior pericardial cavity from a larger peritoneal cavity. (...) These basic relationships have not been modified by urodeles. The small pericardial cavity remains far forward where it is separated by a transverse septum from the principal coelom, which may now be called a pleuroperitoneal cavity because slender lungs are present. (...) The heart [of other tetrapods] is separated from the lungs (and liver if present) by more or less horizontal partitions that have their origin in the embryo as folds on the serous membrane of the right and left lateral body walls. These grow out to join in the midline of the body. They are called lateral mesocardia (birds) or pleuropericardial membranes. Posteriorly they join the transverse septum to form the adult pericardial membrane, or pericardium. (...) In their partitioning of their coelom, embryonic mammals resemble first early fishes (incomplete partition, posterior to heart, consisting of the transverse septum) and then reptiles (pericardium derived from transverse septum and pleuropericardial membranes) Mammals then separate paired pleural cavities from the peritoneal cavity by a diaphragm. The ventral portion of this organ comes from the transverse septum. The dorsal portion is derived from the dorsal mesentery and from still another pair of outgrowths from the lateral body wall, the pleuroperitoneal membranes.[well established][VHOG]") AnnotationAssertion(Annotation( ) "As the folds grow towards the midline, carrying the phrenic nerve, the root of the folds migrate ventrally") AnnotationAssertion( "EHDAA2:0001480") AnnotationAssertion( "EHDAA:4126") AnnotationAssertion( "EMAPA:17706") AnnotationAssertion( "NCIT:C34255") AnnotationAssertion( "VHOG:0001499") AnnotationAssertion(Annotation( "EMAPA:17706") "pleuro-pericardial folds") AnnotationAssertion( "uberon") AnnotationAssertion( "pleuropericardial membrane") AnnotationAssertion(Annotation( "VHOG:0001499") "pleuropericardial membranes") AnnotationAssertion( "UBERON:0006278") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "pleuropericardial folds") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (pleuroperitoneal canal) AnnotationAssertion(Annotation( "ISBN:0124020607") Annotation( "VHOG:0001505") "Each of the canals that links the peritoneal cavity and the caudal part of a pleural cavity.") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001505") Annotation( "VHOG"^^xsd:string) Annotation( ) "Each of the canal that links the peritoneal cavity and the caudal part of a pleural cavity. [ISBN:0124020607][VHOG]") AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0001481") AnnotationAssertion( "EHDAA:4128") AnnotationAssertion( "EMAPA:17704") AnnotationAssertion( "EMAPA:17707") AnnotationAssertion( "VHOG:0001505") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "VHOG:0001505") "pleuroperitoneal channel") AnnotationAssertion( "UBERON:0006279") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "pleuroperitoneal canal") SubClassOf(Annotation( "EHDAA2"^^xsd:string) ) SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (polar trophectoderm) AnnotationAssertion(Annotation( ) "Trophectoderm that surrounds the inner cell mass (ICM).") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000980") Annotation( "VHOG"^^xsd:string) Annotation( ) "The part of the trophectoderm overlying the inner cell mass. [See_Kaufman_MH_and_Bard_JBL, The_anatomical_basis_of_mouse_development_(1999)_San_Diego:_Academic_Press, p.10][VHOG]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000980") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0721676685 Romer AS, Parsons TS, Vertebrate body (1977) p.105-106") "(...) the trophoblast develops rapidly so that contact may be made with the maternal uterine tissues when conditions are appropriate. We have here an excellent example of an embryonic adaptation, the development of a structure never present in either adult or embryo of 'lower' vertebrates.[well established][VHOG]") AnnotationAssertion( "unlike mural trophectoderm cells which stop proliferating and become large polyploid cells (the primary trophoblastic giant cells) by endoreduplication, polar trophectoderm cells remain diploid, continue to proliferate and give rise to both the ectoplacental cone and the extraembryonic ectoderm[MP]") AnnotationAssertion( "EHDAA2:0001484") AnnotationAssertion( "EHDAA:60") AnnotationAssertion( "EMAPA:16048") AnnotationAssertion( "VHOG:0000980") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "VHOG:0000980") "polar trophoblast") AnnotationAssertion( "UBERON:0006280") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "polar trophectoderm") SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ) SubClassOf(Annotation( "EMAPA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete pre-hepatic part) AnnotationAssertion( "EHDAA:8701") AnnotationAssertion( "EMAPA:18422") AnnotationAssertion( "FMA:71904") AnnotationAssertion( "RETIRED_EHDAA2:0001492") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006281") AnnotationAssertion(rdfs:comment "was obsoleted as it had no definition and the name was unclear. May refer to part of inferior vena cava or pre-hepatic portal vein FMA:71904") AnnotationAssertion(rdfs:label "obsolete pre-hepatic part") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (primary head vein) AnnotationAssertion( "EHDAA2:0001498") AnnotationAssertion( "EHDAA:818") AnnotationAssertion( "EMAPA:16242") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006282") AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "early vein that gives rise to various sinuses") AnnotationAssertion(rdfs:label "primary head vein") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (future cardiac ventricle) AnnotationAssertion(Annotation( "ZFA:0001719") "Multi-tissue structure that is part of the heart tube and will become the cardiac ventricle.") AnnotationAssertion( "UBERON:0010226") AnnotationAssertion( "embryonic ventricle") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0001531") AnnotationAssertion( "EMAPA:16350") AnnotationAssertion( "FMA:71006") AnnotationAssertion( "NCIT:C34160") AnnotationAssertion( "TAO:0002231") AnnotationAssertion( "ZFA:0001719") AnnotationAssertion( "early heart ventricle") AnnotationAssertion( "embryonic heart ventricle") AnnotationAssertion( "future heart ventricle") AnnotationAssertion(Annotation( "ZFA:0001719") "presumptive cardiac ventricle heart tube") AnnotationAssertion(Annotation( "EHDAA2:0001531") "primitive ventricle") AnnotationAssertion(Annotation( "EMAPA:16350") "primitive ventricle of heart") AnnotationAssertion(Annotation( "FMA:71006") "primordial cardiac ventricle") AnnotationAssertion(Annotation( "FMA:71006") "primordial ventricle") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006283") AnnotationAssertion(rdfs:comment "The embryonic ventricle or primitive ventricle of the developing heart gives rise to the trabeculated parts of the left and right ventricles. In contrast, the smooth parts of the left and right ventricles originate from the embryological bulbus cordis. The primitive ventricle becomes divided by a septum, the septum inferius or ventricular septum, which grows upward from the lower part of the ventricle, its position being indicated on the surface of the heart by a furrow. Its dorsal part increases more rapidly than its ventral portion, and fuses with the dorsal part of the septum intermedium. For a time an interventricular foramen exists above its ventral portion, but this foramen is ultimately closed by the fusion of the aortic septum with the ventricular septum[WP]") AnnotationAssertion(rdfs:label "future cardiac ventricle") SubClassOf( ) SubClassOf(Annotation( "ZFA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EMAPA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (early prosencephalic vesicle) AnnotationAssertion(Annotation( ) "Future brain vesicle that gives rise to telencephalic ventricle/lateral ventricles and 3rd ventricle.") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000644") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0878932504 Gilbert SF, Developmental Biology (2006) p.381-382, ISBN:978-0030223693 Liem KF, Bemis WE, Walker WF, Grande L, Functional Anatomy of the Vertebrates: An Evolutionary Perspective (2001) p.500") "The early development of most vertebrate brains is similar (...). The zebrafish neural tube follows the same basic differentiation pattern as the mammalian neural tube (reference 1); The brain develops from three embryonic enlargements of the neural tube, which later differentiate into five regions. A forebrain differentiates into telencephalon and diencephalon. The midbrain, or mesencephalon, remains undivided. The hindbrain divides into the metencephalon and myelencephalon. Cavities within the brain enlarge to form a series of interconnected ventricles (reference 2).[well established][VHOG]") AnnotationAssertion( ) AnnotationAssertion( "DHBA:10595") AnnotationAssertion( "EHDAA2:0001571") AnnotationAssertion( "EHDAA:1356") AnnotationAssertion( "EMAPA:16521") AnnotationAssertion( "TAO:0001259") AnnotationAssertion( "VHOG:0000644") AnnotationAssertion( "ZFA:0001259") AnnotationAssertion(Annotation( "EHDAA2:0001571") "prosencephalic vesicle") AnnotationAssertion( "preevaginated forebrain vesicle") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "VHOG:0000644") "forebrain ventricle") AnnotationAssertion(Annotation( "VHOG:0000644") "forebrain vesicle") AnnotationAssertion(Annotation( "VHOG:0000644") "prosencephalic ventricle") AnnotationAssertion( "UBERON:0006284") AnnotationAssertion(rdfs:label "early prosencephalic vesicle") SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (pubic pre-cartilage condensation) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A pubic endochondral element that is composed primarily of a pre-cartilage condensation.") AnnotationAssertion( "EHDAA2:0001574") AnnotationAssertion( "EHDAA:9572") AnnotationAssertion( "EMAPA:18349") AnnotationAssertion( "VHOG:0000965") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006285") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "pubic pre-cartilage condensation") SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (radius cartilage element) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A cartilaginous condensation that has the potential to develop into a radius bone.") AnnotationAssertion( "EHDAA2:0001585") AnnotationAssertion( "EHDAA:7267") AnnotationAssertion( "EMAPA:18054") AnnotationAssertion( "VHOG:0001318") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006286") AnnotationAssertion(rdfs:label "radius cartilage element") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (radius-ulna pre-cartilage condensation) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A radius-ulna endochondral element that is composed primarily of a pre-cartilage condensation.") AnnotationAssertion(Annotation( "EMAPA"^^xsd:string) "EMAPA has a separate radius-ulna cartilage condensation.") AnnotationAssertion( "EHDAA2:0001587") AnnotationAssertion( "EHDAA:4178") AnnotationAssertion( "EMAPA:17420") AnnotationAssertion( "VHOG:0000949") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006287") AnnotationAssertion(rdfs:label "radius-ulna pre-cartilage condensation") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (rib cartilage element) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A rib endochondral element that is composed primarily of cartilage tissue.") AnnotationAssertion( "EHDAA2:0001716") AnnotationAssertion( "EHDAA:8347") AnnotationAssertion( "EMAPA:17678") AnnotationAssertion( "VHOG:0001122") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006288") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "rib cartilage element") SubClassOf(Annotation( "EHDAA2"^^xsd:string) ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (rib pre-cartilage condensation) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A rib endochondral element that is composed primarily of a pre-cartilage condensation.") AnnotationAssertion( "EHDAA2:0001717") AnnotationAssertion( "EHDAA:6026") AnnotationAssertion( "EMAPA:17397") AnnotationAssertion( "VHOG:0000681") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006289") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "rib pre-cartilage condensation") SubClassOf(Annotation( "EHDAA2"^^xsd:string) ) SubClassOf( ) SubClassOf(Annotation( "EHDAA2-abduced") Annotation( "ZFA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (scapula cartilage element) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A scapula endochondral element that is composed primarily of cartilage tissue.") AnnotationAssertion( "EHDAA2:0001777") AnnotationAssertion( "EHDAA:8368") AnnotationAssertion( "EMAPA:18343") AnnotationAssertion( "VHOG:0001125") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006290") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "scapula cartilage element") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (scapula pre-cartilage condensation) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A scapula endochondral element that is composed primarily of a pre-cartilage condensation.") AnnotationAssertion(Annotation( ) "the scapula has been shown to develop from multiple tissues, such as the dermomyotome of the somites, the mesodermal portion of the soma- topleure (a domain of the lateral plate mesoderm or LPM) and neural crest cell-derived mesenchyme (Huang et al., 2000; Matsuoka et al., 2005; Wang et al., 2005).") AnnotationAssertion( "EHDAA2:0001778") AnnotationAssertion( "EHDAA:6041") AnnotationAssertion( "EMAPA:18027") AnnotationAssertion( "VHOG:0000960") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006291") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "scapula pre-cartilage condensation") SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (shoulder joint primordium) AnnotationAssertion(Annotation( "EHDAA2"^^xsd:string) "this is part of the forelimb skeleton in EHDAA2, but this violates part-disjointness") AnnotationAssertion( "EHDAA2:0001836") AnnotationAssertion( "EHDAA:8493") AnnotationAssertion( "EMAPA:17712") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006292") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "shoulder joint primordium") SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (spleen primordium) AnnotationAssertion(Annotation( "ISBN:0123747295") Annotation( "MP:0011263") "A dense syncitial-like mesenchymal thickening in the dorsal mesogastrium[ISBN]. the embryonic connective tissue made up of loosely aggregated mesenchymal cells, supported by interlaminar jelly, that gives rise to the developing spleen[MP].") AnnotationAssertion(Annotation( "EMAPA"^^xsd:string) "check difference between splenic and spleen in EMAPA; note that in EHDAA2 the class 'spleen' refers to the mesenchyme") AnnotationAssertion( "UBERON:0009750") AnnotationAssertion( "EHDAA2:0001904") AnnotationAssertion( "EHDAA:3003") AnnotationAssertion( "EMAPA:18535") AnnotationAssertion( "XAO:0000326") AnnotationAssertion(Annotation( "MP:0011263") "spleen mesenchyme") AnnotationAssertion(Annotation( ) "splenic mesenchyme") AnnotationAssertion(Annotation( "EHDAA2:0001904") "splenic primordium") AnnotationAssertion(Annotation( "XAO:0000326") "left spleen primordium") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006293") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "spleen primordium") SubClassOf(Annotation( "XAO"^^xsd:string) ) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "EHDAA2-modified") ObjectSomeValuesFrom( )) SubClassOf(Annotation( "XAO"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (stapes pre-cartilage condensation) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A stapes endochondral element that is composed primarily of a pre-cartilage condensation.") AnnotationAssertion( "independent of the mesenchymal condensation that will form the otic capsule") AnnotationAssertion( "EHDAA2:0001910") AnnotationAssertion( "EHDAA:5699") AnnotationAssertion( "EMAPA:17827") AnnotationAssertion( "VHOG:0000956") AnnotationAssertion(Annotation( ) "stapedial anlage") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006294") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "stapes pre-cartilage condensation") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (sternebral bone pre-cartilage condensation) AnnotationAssertion( "EHDAA2:0001912") AnnotationAssertion( "EHDAA:9565") AnnotationAssertion( "EMAPA:18345") AnnotationAssertion( "VHOG:0000961") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006295") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "sternebral bone pre-cartilage condensation") SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (subcardinal vein) AnnotationAssertion(Annotation( ) Annotation( "ISBN:0073040584"^^xsd:string) "A vein in the mammalian embryo or the adult of some lower vertebrates that is located on each side of the abdominal region ventromedial to the mesonephros and that in mammals participates in the formation of the inferior vena cava and the renal vein.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EHDAA:2631") AnnotationAssertion( "EMAPA:16829") AnnotationAssertion( "NCIT:C34307") AnnotationAssertion(Annotation( "ncithesaurus:Subcardinal_Vein") "UMLS:C0231088") AnnotationAssertion( "VHOG:0001336") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006296") AnnotationAssertion(rdfs:comment "TBD: part of cardinal system?") AnnotationAssertion(rdfs:label "subcardinal vein") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (sublingual gland primordium) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A primordium that has the potential to develop into a sublingual gland.") AnnotationAssertion( "EHDAA2:0001935") AnnotationAssertion( "EHDAA:7989") AnnotationAssertion( "EMAPA:17752") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006297") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "sublingual gland primordium") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (submandibular gland primordium) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A primordium that has the potential to develop into a submandibular gland.") AnnotationAssertion( "EHDAA2:0001939") AnnotationAssertion( "EHDAA:9255") AnnotationAssertion( "EMAPA:17755") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "EMAPA:17755") "submaxillary gland primordium") AnnotationAssertion( "UBERON:0006298") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "submandibular gland primordium") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (supracardinal vein) AnnotationAssertion(Annotation( ) Annotation( "ISBN:0443065837") "Either of two veins in the mammalian embryo and various adult lower vertebrate forms located in the thoracic and abdominal regions dorsolateral to and on either side of the descending aorta and giving rise to the azygos and hemiazygos veins and a part of the inferior vena cava[MW]. These veins drain the body wall via the segmental intercostal veins, thus taking over the function of the posterior cardinals[ISBN].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0001964") AnnotationAssertion( "EHDAA:7492") AnnotationAssertion( "EMAPA:16830") AnnotationAssertion( "NCIT:C34308") AnnotationAssertion(Annotation( "ncithesaurus:Supracardinal_Vein") "UMLS:C0231090") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006300") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "supracardinal vein") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (telencephalic part of interventricular foramen) AnnotationAssertion( "EHDAA2:0001980") AnnotationAssertion( "EHDAA:5474") AnnotationAssertion( "EMAPA:16915") AnnotationAssertion( "VHOG:0000809") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006301") AnnotationAssertion(rdfs:label "telencephalic part of interventricular foramen") SubClassOf(Annotation( "EHDAA2"^^xsd:string) ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (tracheal diverticulum) AnnotationAssertion( "EMAPA:16740") AnnotationAssertion( "RETIRED_EHDAA2:0002072") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006303") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "tracheal diverticulum") SubClassOf( ) # Class: (future trigeminal ganglion) AnnotationAssertion( "EHDAA:924") AnnotationAssertion( "EMAPA:16663") AnnotationAssertion( "RETIRED_EHDAA2:0002089") AnnotationAssertion(Annotation( "EMAPA:16663") "trigeminal V preganglion") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "EMAPA:16663") "trigeminal preganglion") AnnotationAssertion( "UBERON:0006304") AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "See: https://github.com/obophenotype/mouse-anatomy-ontology/issues/13 and https://github.com/obophenotype/uberon/issues/693 -- consider merging into trigeminal ganglion, as this complicates the model") AnnotationAssertion(rdfs:label "future trigeminal ganglion") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (tunica vasculosa lentis) AnnotationAssertion(Annotation( ) "An extensive capillary network, spreading over the posterior and lateral surfaces of the lens of the eye. It disappears shortly after birth.") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000978") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "DOI:10.1016/j.semcdb.2007.08.014 Beebe DC, Maintening transparency: A review of the developmental physiology and pathophysiology of two avascular tissues. Seminars in Cell and Developmental Biology (2008) Fig.1") "Soon after it forms, the mammalian lens becomes invested with a network of capillaries. (...) The capillary network on the posterior of the lens is the tunica vasculosa lentis (TVL).[well established][VHOG]") AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0002097") AnnotationAssertion( "EHDAA:5705") AnnotationAssertion( "EMAPA:18235") AnnotationAssertion( "FMA:321625") AnnotationAssertion( "VHOG:0000978") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006305") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "tunica vasculosa lentis") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (ulna cartilage element) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A cartilaginous condensation that has the potential to develop into a ulna.") AnnotationAssertion( "EHDAA2:0002098") AnnotationAssertion( "EHDAA:7269") AnnotationAssertion( "EMAPA:18055") AnnotationAssertion( "VHOG:0001155") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006306") AnnotationAssertion(rdfs:label "ulna cartilage element") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (urogenital membrane) AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001187") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( ) "Ventral part of the cloacal membrane separating the gut from the fetus external environment. [TFD][VHOG]") AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0004025") AnnotationAssertion( "EHDAA:7011") AnnotationAssertion( "EMAPA:17378") AnnotationAssertion( "RETIRED_EHDAA2:0002141") AnnotationAssertion( "VHOG:0001187") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006307") AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "During the 7th week the urorectal septum divides the cloacal membrane into a urogenital membrane (ventrally) and an anal membrane (dorsally) [http://www.embryology.ch/anglais/ugenital/genitexterne01.html]") AnnotationAssertion(rdfs:label "urogenital membrane") SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (venous vitelline plexus) AnnotationAssertion( "EHDAA:1945") AnnotationAssertion( "EMAPA:17020") AnnotationAssertion( "RETIRED_EHDAA2:0002172") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006309") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "venous vitelline plexus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (vitelline venous plexus) AnnotationAssertion( "EHDAA2:0002210") AnnotationAssertion( "EHDAA:1945") AnnotationAssertion( "EMAPA:17020") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006310") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "vitelline venous plexus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (chamber of eyeball) AnnotationAssertion(Annotation( ) "A segment of the eyeball that is filled with refractive media.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0002085") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37529") AnnotationAssertion( "FMA:58071") AnnotationAssertion( "MA:0002459") AnnotationAssertion( "NCIT:C32301") AnnotationAssertion(Annotation( "ncithesaurus:Chamber_of_the_Eye") "UMLS:C0459556") AnnotationAssertion(Annotation( "MA:0002459") "eye chamber") AnnotationAssertion(Annotation( "FMA:58071") "eyeball chamber") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0002085") "chamber of eye") AnnotationAssertion( "UBERON:0006311") AnnotationAssertion(rdfs:label "chamber of eyeball") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (ocular refractive media) AnnotationAssertion(Annotation( ) "Body substance in a liquid or semi-solid state in the eyeball which serves to refract light.") AnnotationAssertion( "ocular refraction") AnnotationAssertion( "MA:0001911") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006312") AnnotationAssertion(rdfs:label "ocular refractive media") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (bodily fluid) AnnotationAssertion(Annotation( ) Annotation( "MESH:A12.207") "Liquid components of living organisms. includes fluids that are excreted or secreted from the body as well as body water that normally is not.") AnnotationAssertion( "fluid") AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:20") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37441") AnnotationAssertion( "FMA:280556") AnnotationAssertion( "GAID:266") AnnotationAssertion( "MESH:D001826") AnnotationAssertion( "galen:BodyFluid") AnnotationAssertion(Annotation( "GAID:266") "body fluid") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006314") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "bodily fluid") SubClassOf( ) # Class: (orbitalis muscle) AnnotationAssertion(Annotation( ) "An orbitalis muscle is a rudimentary nonstriated muscle (smooth muscle) that crosses from the infraorbital groove and sphenomaxillary fissure and intimately united with the periosteum of the orbit. It is often called Muller's muscle. One characteristic of Horner's Syndrome is enophthalmos (retraction of the eyeball into the orbit due to paralysis of the orbitalis muscle that spans the inferior orbital fissure). Its function is eyeball protrusion.") AnnotationAssertion(Annotation( "FMA"^^xsd:string) "subclass of 'muscle layer' in FMA") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37691") AnnotationAssertion( "FMA:49034") AnnotationAssertion( "MA:0001274") AnnotationAssertion( "NCIT:C52800") AnnotationAssertion(Annotation( "ncithesaurus:Orbitalis_Muscle") "UMLS:C0229105") AnnotationAssertion(Annotation( "FMA:49034") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "musculus orbitalis") AnnotationAssertion(Annotation( "FMA:49034") "orbital muscle") AnnotationAssertion(Annotation( "FMA:49034") "orbital muscle of muller") AnnotationAssertion(Annotation( "FMA:49034") "orbitalis") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "musculus orbitalis") AnnotationAssertion(Annotation( ) "orbitalis") AnnotationAssertion( "UBERON:0006318") AnnotationAssertion(rdfs:label "orbitalis muscle") SubClassOf(Annotation( "MA"^^xsd:string) ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (spinal cord reticular nucleus) AnnotationAssertion( ) AnnotationAssertion( "BAMS:RS") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37749") AnnotationAssertion( "FMA:73909") AnnotationAssertion( "MA:0001123") AnnotationAssertion(Annotation( "FMA:73909") "spinal reticular nucleus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BAMS:RS") "reticular nucleus of the spinal cord") AnnotationAssertion( "UBERON:0006319") AnnotationAssertion(rdfs:label "spinal cord reticular nucleus") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (inferior oblique extraocular muscle) AnnotationAssertion(Annotation( ) "Thin, narrow muscle placed near the anterior margin of the floor of the orbit.") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001132") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0030223693 Liem KF, Bemis WE, Walker WF, Grande L, Functional Anatomy of the Vertebrates: An Evolutionary Perspective (2001) p.331") "The ability to rotate the eyeball is common to all vertebrates with well-developed eyes, regardless of the habitat in which they live, so these [extrinsic ocular] muscles tend to be conservative. They change little during the course of evolution.[well established][VHOG]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010117") AnnotationAssertion( "FMA:49040") AnnotationAssertion( "MA:0001276") AnnotationAssertion( "NCIT:C32783") AnnotationAssertion( "TAO:0000861") AnnotationAssertion(Annotation( "ncithesaurus:Inferior_Oblique_Muscle") "UMLS:C0582817") AnnotationAssertion( "VHOG:0001132") AnnotationAssertion( "ZFA:0000861") AnnotationAssertion(Annotation( "FMA:49040") "inferior oblique") AnnotationAssertion( "inferior oblique muscle") AnnotationAssertion( "m. obliquus inferior") AnnotationAssertion(Annotation( "AAO:0010117") "musculus obliquus inferior") AnnotationAssertion(Annotation( ) "musculus obliquus inferior bulbi") AnnotationAssertion(Annotation( "FMA:49040") "obliquus inferior") AnnotationAssertion(Annotation( ) "obliquus oculi inferior") AnnotationAssertion(Annotation( "VHOG:0001132") "ventral oblique extraocular muscle") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "musculus obliquus inferior bulbi") AnnotationAssertion(Annotation( "VHOG:0001132") "ventral oblique extraocular muscles") AnnotationAssertion( "UBERON:0006320") AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "Taxon notes (via VHOG): \"The ability to rotate the eyeball is common to all vertebrates with well-developed eyes, regardless of the habitat in which they live, so these [extrinsic ocular] muscles tend to be conservative. They change little during the course of evolution.\" Liem KF, Bemis WE, Walker WF, Grande L, Functional Anatomy of the Vertebrates: An Evolutionary Perspective, Third Edition (2001) Orlando Fla.: Harcourt College Publishers, p.331") AnnotationAssertion(rdfs:label "inferior oblique extraocular muscle") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/e/e8/Eyemuscles.png"^^xsd:anyURI) SubClassOf(Annotation( "MA"^^xsd:string) ) SubClassOf(Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "orbital surface of the maxilla lateral to the lacrimal groove") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "laterally onto the eyeball deep to the lateral rectus by a short flat tendon") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (superior oblique extraocular muscle) AnnotationAssertion(Annotation( ) "The superior oblique muscle, or obliquus oculi superior, is a fusiform muscle in the upper, medial side of the orbit whose primary action is downward, lateral rotation of the eye. One of the extraocular muscles, the superior oblique is the only muscle innervated by the trochlear nerve (the fourth cranial nerve).") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0010119") Annotation( "AAO"^^xsd:string) Annotation( "AAO:EJS"^^xsd:string) "Cranial nerve IV innervated; dorsal in the obliquus group.[AAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001131") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0030223693 Liem KF, Bemis WE, Walker WF, Grande L, Functional Anatomy of the Vertebrates: An Evolutionary Perspective (2001) p.331") "The ability to rotate the eyeball is common to all vertebrates with well-developed eyes, regardless of the habitat in which they live, so these [extrinsic ocular] muscles tend to be conservative. They change little during the course of evolution.[well established][VHOG]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010119") AnnotationAssertion( "FMA:49039") AnnotationAssertion( "MA:0001277") AnnotationAssertion( "NCIT:C33688") AnnotationAssertion( "TAO:0000738") AnnotationAssertion(Annotation( "ncithesaurus:Superior_Oblique_Muscle") "UMLS:C0582816") AnnotationAssertion( "VHOG:0001131") AnnotationAssertion( "ZFA:0000738") AnnotationAssertion(Annotation( "VHOG:0001131") "dorsal oblique extraocular muscle") AnnotationAssertion(Annotation( "AAO:0010119") "musculus obliquus superior") AnnotationAssertion(Annotation( "FMA:49039") "obliquus superior") AnnotationAssertion(Annotation( "FMA:49039") "superior oblique") AnnotationAssertion( "superior oblique muscle") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "M. obliquus superior") AnnotationAssertion(Annotation( "VHOG:0001131") "dorsal oblique extraocular muscles") AnnotationAssertion(Annotation( ) Annotation( ) "musculus obliquus superior bulbi") AnnotationAssertion(Annotation( ) "obliquus oculi superior") AnnotationAssertion( "UBERON:0006321") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "superior oblique extraocular muscle") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/e/e8/Eyemuscles.png"^^xsd:anyURI) SubClassOf(Annotation( "MA"^^xsd:string) ) SubClassOf(Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "Outer posterior quadrant of the eyeball") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (inferior rectus extraocular muscle) AnnotationAssertion(Annotation( ) "A muscle in the orbit that depresses, adducts, and helps extort (rotate laterally) the eye. The inferior rectus muscle is the only muscle that is capable of depressing the pupil when it is in a fully abducted position.") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001130") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0030223693 Liem KF, Bemis WE, Walker WF, Grande L, Functional Anatomy of the Vertebrates: An Evolutionary Perspective (2001) p.331") "The ability to rotate the eyeball is common to all vertebrates with well-developed eyes, regardless of the habitat in which they live, so these [extrinsic ocular] muscles tend to be conservative. They change little during the course of evolution.[well established][VHOG]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010101") AnnotationAssertion( "FMA:49036") AnnotationAssertion( "MA:0001279") AnnotationAssertion( "NCIT:C32790") AnnotationAssertion( "TAO:0000457") AnnotationAssertion(Annotation( "ncithesaurus:Inferior_Rectus_Muscle") "UMLS:C0582819") AnnotationAssertion( "VHOG:0001130") AnnotationAssertion( "ZFA:0000457") AnnotationAssertion(Annotation( "FMA:49036") "inferior rectus") AnnotationAssertion( "inferior rectus muscle") AnnotationAssertion( "m. rectus inferior") AnnotationAssertion(Annotation( "AAO:0010101") "musculus rectus inferior") AnnotationAssertion(Annotation( "VHOG:0001130") "ventral rectus extraocular muscle") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "musculus rectus inferior bulbi") AnnotationAssertion(Annotation( "TAO:0000457") Annotation( ) "ventral recti") AnnotationAssertion(Annotation( "TAO:0000457") "ventral rectus") AnnotationAssertion( "UBERON:0006322") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "inferior rectus extraocular muscle") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/e/e8/Eyemuscles.png"^^xsd:anyURI) SubClassOf(Annotation( "MA"^^xsd:string) ) # Class: (superior rectus extraocular muscle) AnnotationAssertion(Annotation( ) "The superior rectus muscle is a muscle in the orbit. It is one of the extraocular muscles. It is innervated by the superior division of the oculomotor nerve (Cranial Nerve III). In the primary position (looking straight ahead), the superior rectus muscle's primary function is elevation, although it also contributes to intorsion and adduction.") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001128") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0030223693 Liem KF, Bemis WE, Walker WF, Grande L, Functional Anatomy of the Vertebrates: An Evolutionary Perspective (2001) p.331") "The ability to rotate the eyeball is common to all vertebrates with well-developed eyes, regardless of the habitat in which they live, so these [extrinsic ocular] muscles tend to be conservative. They change little during the course of evolution.[well established][VHOG]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010099") AnnotationAssertion( "FMA:49035") AnnotationAssertion( "MA:0001282") AnnotationAssertion( "NCIT:C33694") AnnotationAssertion( "TAO:0000345") AnnotationAssertion(Annotation( "ncithesaurus:Superior_Rectus_Muscle") "UMLS:C0582818") AnnotationAssertion( "VHOG:0001128") AnnotationAssertion( "ZFA:0000345") AnnotationAssertion(Annotation( "VHOG:0001128") "dorsal rectus extraocular muscle") AnnotationAssertion( "m. rectus superior") AnnotationAssertion(Annotation( "AAO:0010099") "musculus rectus superior") AnnotationAssertion(Annotation( "FMA:49035") "superior rectus") AnnotationAssertion( "superior rectus muscle") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "ZFA:0000345") Annotation( ) "dorsal recti") AnnotationAssertion(Annotation( "TAO:0000345") "dorsal rectus") AnnotationAssertion(Annotation( ) Annotation( ) "musculus rectus superior bulbi") AnnotationAssertion( "UBERON:0006323") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "superior rectus extraocular muscle") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/e/e8/Eyemuscles.png"^^xsd:anyURI) SubClassOf(Annotation( "MA"^^xsd:string) ) SubClassOf(Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (laryngeal intrinsic ligament) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37628") AnnotationAssertion( "FMA:72058") AnnotationAssertion( "MA:0001757") AnnotationAssertion(Annotation( "FMA:72058") "intrinsic ligament of larynx") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006325") AnnotationAssertion(rdfs:label "laryngeal intrinsic ligament") SubClassOf( ) # Class: (base of arytenoid) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37424") AnnotationAssertion( "FMA:55349") AnnotationAssertion( "MA:0001761") AnnotationAssertion(Annotation( "FMA:55349") "arytenoid cartilage base") AnnotationAssertion(Annotation( "FMA:55349") "base of arytenoid") AnnotationAssertion(Annotation( "FMA:55349") "base of arytenoid cartilage") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006326") AnnotationAssertion(rdfs:label "base of arytenoid") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (laryngeal extrinsic muscle) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37629") AnnotationAssertion( "FMA:55225") AnnotationAssertion( "MA:0001769") AnnotationAssertion(Annotation( "FMA:55225") "extrinsic muscle of larynx") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006327") AnnotationAssertion(rdfs:label "laryngeal extrinsic muscle") SubClassOf( ) # Class: (laryngeal intrinsic muscle) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37630") AnnotationAssertion( "FMA:55226") AnnotationAssertion( "MA:0001770") AnnotationAssertion(Annotation( "FEED:FEED"^^xsd:string) "intrinsic laryngeal muscle") AnnotationAssertion(Annotation( "FMA:55226") "intrinsic muscle of larynx") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FEED:FEED"^^xsd:string) "intrinsic laryneal muscles") AnnotationAssertion( "UBERON:0006328") AnnotationAssertion(rdfs:label "laryngeal intrinsic muscle") SubClassOf( ) # Class: (superior pharyngeal constrictor) AnnotationAssertion(Annotation( ) "The superior pharyngeal constrictor muscle is a quadrilateral muscle, thinner and paler than the inferior pharyngeal constrictor muscle and middle pharyngeal constrictor muscle. [WP,unvetted].") AnnotationAssertion(Annotation( "2012-07-02"^^xsd:string) Annotation( "FEED"^^xsd:string) Annotation( "http://www.feedexp.org"^^xsd:string) "The superior constrictor is a muscle that is an integral part of the pharyngeal tube that is attached to the mandible, pterygomandibular raphe, basioccipital bone, pterygoid process and midline raphe and is innervated by Cranial Nerve X via the pharyngeal plexus.[FEED]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:18966") AnnotationAssertion( "FMA:46621") AnnotationAssertion( "MA:0002280") AnnotationAssertion( "NCIT:C33672") AnnotationAssertion(Annotation( "ncithesaurus:Superior_Constrictor_Muscle") "UMLS:C1515063") AnnotationAssertion(Annotation( "FMA:46621") "constrictor muscle of pharynx superior") AnnotationAssertion(Annotation( "FMA:46621") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "musculus constrictor pharyngis superior") AnnotationAssertion(Annotation( "FMA:46621") "superior constrictor") AnnotationAssertion(Annotation( "ncithesaurus:Superior_Constrictor_Muscle") "superior constrictor muscle") AnnotationAssertion(Annotation( "FMA:46621") "superior constrictor of pharynx") AnnotationAssertion(Annotation( "FMA:46621") "superior constrictor pharyngeus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "musculus constrictor pharyngis superior") AnnotationAssertion( "UBERON:0006329") AnnotationAssertion(rdfs:label "superior pharyngeal constrictor") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/a/ac/Musculusconstrictorpharyngissuperior.png"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "pharyngeal plexus") Annotation( "Wikipedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (anterior lingual gland) AnnotationAssertion(Annotation( "ISBN:0-683-40008-8"^^xsd:string) Annotation( "MP:0009518") "The small glands located near the apex of the tongue on either side of the frenulum.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:59796") AnnotationAssertion( "MA:0002701") AnnotationAssertion( "NCIT:C32987") AnnotationAssertion(Annotation( "ncithesaurus:Lingual_Salivary_Gland") "UMLS:C0930558") AnnotationAssertion(Annotation( ) "Bauhin's glands") AnnotationAssertion(Annotation( ) "Blandin's glands") AnnotationAssertion(Annotation( ) "Nuhn's glands") AnnotationAssertion(Annotation( "FMA:59796") "anterior lingual salivary gland") AnnotationAssertion(Annotation( "FMA:59796") "lingual salivary gland") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006330") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "anterior lingual gland") SubClassOf(Annotation( "MP"^^xsd:string) ) SubClassOf( ) SubClassOf( ) # Class: (brainstem nucleus) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A nucleus of brain that is part of a brainstem.") AnnotationAssertion( "EMAPA:32790") AnnotationAssertion( "MA:0000821") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "EMAPA:32790") "brain stem nucleus") AnnotationAssertion( "UBERON:0006331") AnnotationAssertion(rdfs:label "brainstem nucleus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (nasal capsule) AnnotationAssertion(Annotation( ) "An embryonic cartilaginous frame, the nasal capsule, an evolutionary-conserved structure composed of ventral and dorsal components: the mesethmoid and ectethmoid cartilages, respectively.[PMID].") AnnotationAssertion(Annotation( "ZFA"^^xsd:string) "consider splitting this class. Developing cartilage in mammals?") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0002035") Annotation( "TAO"^^xsd:string) Annotation( "TAO:wd"^^xsd:string) "Multi-tissue structure that is the connective tissue sheath that surrounds, except for external opening(s) in adult, the olfactory epithelium.[TAO]") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0000313") Annotation( "AAO"^^xsd:string) Annotation( "AAO:LAP"^^xsd:string) "Structure that has both respiratory and olfactory functions and lies anterior to the braincase, in the foremost section of the cranium.[AAO]") AnnotationAssertion(Annotation( "2012-09-06"^^xsd:string) Annotation( "TAO:0002035") Annotation( "TAO"^^xsd:string) Annotation( "Curator"^^xsd:string) "Development information from Brian Hall, Bones and Cartilage: Developmental Skeletal Biology.[TAO]") AnnotationAssertion( "In Aves: The nasal capsule is dorsoventrally divided into two parts: the upper part, the ectethmoid, serves olfaction and is composed of the lamina cribosa, the crista galli apophysis and the conchae. The lower part, the mesethmoid, is a thick cartilage bar extending from the corpus sphenoidalis to the rostral extremity of the nose (Fig. 1A-B). In the avian embryo, the mesethmoid constitutes the cartilage primordium of the upper beak.") AnnotationAssertion( "In avians, the mesethmoid supports upper beak formation, whereas the ectethmoid comprises elements of the olfactory system, including the lamina cribosa, the crista galli apophysis and the conchae.") AnnotationAssertion(Annotation( "ISBN:0073040584"^^xsd:string) "In most mammals, the nasal capsule remains unossified, except in mammals where the ethmoid portion ossifies to form the turbinates") AnnotationAssertion( "by the process of folding of the cartilaginous nasal capsule during fetal development, outpouchings of the main nasal chamber become enlarged (primary pneumatization) (Witmer, 1999; Macrini, 2014). The resulting paranasal recesses may or may not expand farther into the bodies of facial and basicranial bones (secondary pneumatization). Histori- cally, the result of these processes, paranasal recesses and sinuses, respectively, have not always been distin- guished (see further discussion in Rossie, 2006). Yet, in either case the nasal fossa becomes subdivided into a central nasal chamber and more peripheral paranasal chambers (Smith et al., 2014; Curtis and Van Valken- burgh, 2014)[PMID:25312359]") AnnotationAssertion(Annotation( "TAO") "Connective tissue sheath in TAO. Structure that has both respiratory and olfactory functions and lies anterior to the braincase, in the foremost section of the cranium[AAO]. Cartilaginous envelope containing the nasal organ[FishBase]") AnnotationAssertion( "AAO:0000313") AnnotationAssertion( "EMAPA:17852") AnnotationAssertion( "FMA:320527") AnnotationAssertion( "MA:0000283") AnnotationAssertion( "TAO:0002035") AnnotationAssertion( "ZFA:0005507") AnnotationAssertion( "cartilaginous nasal capsule") AnnotationAssertion(Annotation( ) "tripartite nasal capsule") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006332") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "nasal capsule") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (snout) AnnotationAssertion(Annotation( "2012-10-05") Annotation( "ZFA") Annotation( "ZFA:0005496") "Surface structure that is the region of the head in front of and between the orbits, and above the lower jaw. Nares are located on the snout[ZFA].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:32806") AnnotationAssertion( "MA:0001910") AnnotationAssertion( "TAO:0001712") AnnotationAssertion( "ZFA:0005496") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "MA:0001910") "muzzle") AnnotationAssertion( "UBERON:0006333") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "snout") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete unspecified) AnnotationAssertion( "XAO:0003003") AnnotationAssertion( "ZFA:0001093") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006336") AnnotationAssertion(rdfs:label "obsolete unspecified") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (distal early tubule) AnnotationAssertion(Annotation( "ZFA:0005293") "Portion of the renal tubule which is just posterior to the proximal straight tubule.") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0011034") Annotation( "AAO"^^xsd:string) Annotation( "XAO:curator") "Portion of the pronephric tubule that is immediately posterior to the late proximal tubule.[AAO]") AnnotationAssertion(Annotation( "XAO"^^xsd:string) "in XAO this is pronephric; in ZFA it is an adult structure. we treat it here as generic. consider placing XAO under proneprhic subclass. check relationship with EDCT.") AnnotationAssertion( "AAO:0011034") AnnotationAssertion( "EMAPA:27788") AnnotationAssertion( "EMAPA:28007") AnnotationAssertion( "TAO:0005293") AnnotationAssertion( "XAO:0000287") AnnotationAssertion( "ZFA:0005293") AnnotationAssertion(Annotation( "XAO:0000287") Annotation( ) "IT1") AnnotationAssertion(Annotation( "XAO:0000287") Annotation( ) "IT2") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "ZFA:0005293") Annotation( ) "distal early tubules") AnnotationAssertion(Annotation( "EMAPA:27788") "early distal tubule of capillary loop nephron") AnnotationAssertion(Annotation( "XAO:0000287") "pronephric early distal tubule") AnnotationAssertion( "UBERON:0006337") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "distal early tubule") SubClassOf( ) # Class: (lateral ventricle choroid plexus stroma) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A choroid plexus stroma that is part of a lateral ventricle.") AnnotationAssertion( "definitions should be fixed to use generic stroma class") AnnotationAssertion( "MA:0000963") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006338") AnnotationAssertion(rdfs:label "lateral ventricle choroid plexus stroma") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (third ventricle choroid plexus stroma) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A choroid plexus stroma that is part of a third ventricle.") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37056") AnnotationAssertion( "MA:0000881") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006339") AnnotationAssertion(rdfs:label "third ventricle choroid plexus stroma") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (fourth ventricle choroid plexus stroma) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A choroid plexus stroma that is part of a fourth ventricle.") AnnotationAssertion( "MA:0000985") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006340") AnnotationAssertion(rdfs:label "fourth ventricle choroid plexus stroma") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (outer renal medulla peritubular capillary) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A peritubular capillary that is part of a outer medulla of kidney.") AnnotationAssertion( "EMAPA:35461") AnnotationAssertion( "MA:0002589") AnnotationAssertion(Annotation( "MA:0002589") "kidney outer medulla peritubular capillary") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006341") AnnotationAssertion(rdfs:label "outer renal medulla peritubular capillary") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (left subhepatic recess) AnnotationAssertion( "EMAPA:18047") AnnotationAssertion( "FMA:20677") AnnotationAssertion( "MA:0000444") AnnotationAssertion(Annotation( "MA:0000444") "left hepatic recess") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006342") AnnotationAssertion(rdfs:comment "Compare with lesser sac / omental bursa and its cavities / recesses") AnnotationAssertion(rdfs:label "left subhepatic recess") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf(Annotation( "unverified") ObjectSomeValuesFrom( )) # Class: (right subhepatic recess) AnnotationAssertion(Annotation( ) "The hepatorenal recess or subhepatic recess is the space that separates the liver from the right kidney. As a potential space, the recess is not filled with fluid under normal conditions. However, fluid can collect in this space in circumstances where the abdomen fills with fluid, such as hemoperitoneum. This fluid may be seen on ultrasound or computed tomography (CT scan).") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:18050") AnnotationAssertion( "FMA:14715") AnnotationAssertion( "MA:0000450") AnnotationAssertion(Annotation( "FMA:14715") "Morison's pouch") AnnotationAssertion(Annotation( "FMA:14715") "hepatorenal fossa") AnnotationAssertion(Annotation( "FMA:14715") "hepatorenal recess of subhepatic space") AnnotationAssertion(Annotation( "FMA:14715") "recessus hepatorenalis") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) Annotation( ) "recessus hepatorenalis recessi subhepatici") AnnotationAssertion(Annotation( "MA:0000450") "right hepatic recess") AnnotationAssertion(Annotation( "FMA:14715") "right posterior subphrenic space") AnnotationAssertion(Annotation( "FMA:14715") "right subhepatic space") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "Morison pouch") AnnotationAssertion(Annotation( ) "Morison's pouch") AnnotationAssertion(Annotation( ) "hepatorenal recess") AnnotationAssertion(Annotation( ) "pouch of Morison") AnnotationAssertion(Annotation( ) "pouch of Morrison") AnnotationAssertion( "UBERON:0006343") AnnotationAssertion(rdfs:label "right subhepatic recess") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (stapedial artery) AnnotationAssertion(Annotation( "MP:0004665") "A small artery that passes through the ring of the stapes; while the stapedial artery is a temporary artery thought to disappear at late embryonic stage in humans, the mouse stapedial artery is complete by E13 and persists into adulthood[MP].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0001908") AnnotationAssertion( "EMAPA:17313") AnnotationAssertion( "FMA:79390") AnnotationAssertion( "MA:0002044") AnnotationAssertion( "NCIT:C34304") AnnotationAssertion(Annotation( "ncithesaurus:Stapedial_Artery") "UMLS:C1284048") AnnotationAssertion(Annotation( "EHDAA2:0001908") "stapedial artery temporary") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "EHDAA2:0001908") "stapedial") AnnotationAssertion( "UBERON:0006345") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "stapedial artery") SubClassOf(Annotation( "EHDAA2"^^xsd:string) ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (communicating artery) AnnotationAssertion(Annotation( "ncithesaurus:Communicating_Artery") "An artery that connects two larger arteries.") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:18598") AnnotationAssertion( "MA:0001938") AnnotationAssertion( "NCIT:C52851") AnnotationAssertion(Annotation( "ncithesaurus:Communicating_Artery") "UMLS:C1707451") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006347") AnnotationAssertion(rdfs:comment "Grouping for anterior and posterior") AnnotationAssertion(rdfs:label "communicating artery") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (epigastric artery) AnnotationAssertion(Annotation( "ncithesaurus:Epigastric_Artery") "An external iliac artery branch that supplies blood to the anterior abdominal wall.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:18750") AnnotationAssertion( "MA:0001948") AnnotationAssertion( "MESH:D019074") AnnotationAssertion( "NCIT:C52860") AnnotationAssertion(Annotation( "ncithesaurus:Epigastric_Artery") "UMLS:C0282640") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006349") AnnotationAssertion(rdfs:label "epigastric artery") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (principal vein of forelimb) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A prinicipal vein of limb that is part of a forelimb.") AnnotationAssertion( "EMAPA:17018") AnnotationAssertion( "MA:0002199") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006351") AnnotationAssertion(rdfs:label "principal vein of forelimb") SubClassOf( ) SubClassOf( ) # Class: (principal vein of hindlimb) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A prinicipal vein of limb that is part of a hindlimb.") AnnotationAssertion( "EMAPA:17019") AnnotationAssertion( "MA:0002200") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006353") AnnotationAssertion(rdfs:label "principal vein of hindlimb") SubClassOf( ) SubClassOf( ) # Class: (superior vesical vein) AnnotationAssertion( "inferred from artery") AnnotationAssertion( "EMAPA:18646") AnnotationAssertion( "MA:0002227") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006355") AnnotationAssertion(rdfs:label "superior vesical vein") SubClassOf(Annotation( "true"^^xsd:string) Annotation( "MA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (epigastric vein) AnnotationAssertion(Annotation( ) "A vein that drains the anterior abdominal wall.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:18759") AnnotationAssertion( "MA:0002114") AnnotationAssertion( "NCIT:C53045") AnnotationAssertion(Annotation( "ncithesaurus:Epigastric_Vein") "UMLS:C1707930") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006356") AnnotationAssertion(rdfs:label "epigastric vein") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (vasa hyaloidea propria) AnnotationAssertion(Annotation( ) "The vasa hyaloidea propria and tunica vasculosa lentis are small branches of the hyaloid artery which fill the primary vitreous.") AnnotationAssertion( "EMAPA:18236") AnnotationAssertion( "FMA:312395") AnnotationAssertion( "MA:0001285") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006358") AnnotationAssertion(rdfs:label "vasa hyaloidea propria") SubClassOf( ) SubClassOf(Annotation( "EMAPA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (mesoduodenum) AnnotationAssertion( "EMAPA:17183") AnnotationAssertion( "EMAPA:17198") AnnotationAssertion( "EMAPA:19082") AnnotationAssertion( "MA:0001556") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006359") AnnotationAssertion(rdfs:label "mesoduodenum") SubClassOf( ) # Class: (tongue intermolar eminence) AnnotationAssertion(Annotation( "ISBN:0080573371") "A large swelling on the dorsal surface of the tongue at the junction between the anterior two-thirds and posterior one-third.") AnnotationAssertion( "EMAPA:18273") AnnotationAssertion( "MA:0001590") AnnotationAssertion(Annotation( "MA:0001590") "intermolar eminence") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006360") AnnotationAssertion(rdfs:label "tongue intermolar eminence") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (ureteric bud tip) AnnotationAssertion(Annotation( ) Annotation( "MP:0011760") "The terminal end of the ureteric tree; the ureteric tip cells are proliferating immature cells located at the branching points that induce the adjacent cap mesenchyme to undergo nephrogenesis.") AnnotationAssertion( "MA placement to be checked") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:27605") AnnotationAssertion( "MA:0002601") AnnotationAssertion(Annotation( "MA:0002601") "ureteric tip") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "EMAPA:27605") "ampulla of ureter") AnnotationAssertion(Annotation( "MP:0011760") "ureteric ampulla") AnnotationAssertion(Annotation( "MP:0011760") "ureteric bud ampulla") AnnotationAssertion( "UBERON:0006364") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "ureteric bud tip") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (perihilar interstitium) AnnotationAssertion(Annotation( "MGI:anna"^^xsd:string) Annotation( "MP:0011337") "The part of the renal interstitium surrounding the pelvis.") AnnotationAssertion( "EMAPA:28083") AnnotationAssertion( "MA:0002618") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006373") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "perihilar interstitium") SubClassOf( ) SubClassOf(Annotation( "MA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "MA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (part of afferent arteriole forming the juxtaglomerular complex) AnnotationAssertion( "EMAPA:28269") AnnotationAssertion( "MA:0002580") AnnotationAssertion(Annotation( "MA:0002580") "part of afferent arteriole forming juxtaglomerular complex") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "MA:0002580") "renin-producing cells") AnnotationAssertion( "UBERON:0006374") AnnotationAssertion(rdfs:label "part of afferent arteriole forming the juxtaglomerular complex") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (premacula segment of distal straight tubule) AnnotationAssertion( "EMAPA:29671") AnnotationAssertion( "MA:0002628") AnnotationAssertion(Annotation( "MA:0002628") "distal straight tubule premacula segment") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "kidney medulla loop of Henle ascending limb thick segment") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "medullary thick ascending limb of Henle's loop") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "renal medulla loop of Henle ascending limb thick segment") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "renal medulla thick ascending limb") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006376") AnnotationAssertion(rdfs:label "premacula segment of distal straight tubule") SubClassOf( ) SubClassOf(Annotation( "MA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "MA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "MA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (remnant of Rathke's pouch) AnnotationAssertion( "EMAPA:17518") AnnotationAssertion( "MA:0000857") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "MA:0000857") "hypophyseal cleft") AnnotationAssertion( "UBERON:0006377") AnnotationAssertion(rdfs:label "remnant of Rathke's pouch") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (basisphenoid bone) AnnotationAssertion(Annotation( "ISBN:0-683-40008-8"^^xsd:string) Annotation( "MP:0000106") "Part of the base of the cranium between the basioccipital and the presphenoid, which usually ossifies separately in the embryo or in the young, and becomes a part of the sphenoid in the adult; in many animals it persists as a separate bone between the basioccipital bone and the presphenoidal bone.") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0000169") Annotation( "TAO"^^xsd:string) Annotation( "TAO:wd"^^xsd:string) "An endochondral bone that is located ventral to the pterosphenoid and dorsal to the parasphenoid. Basisphenoid is a median bone that is usually Y-shaped.[TAO]") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0000040") Annotation( "AAO"^^xsd:string) Annotation( "AAO:LAP"^^xsd:string) "Endochondral ossification of the ventromedial portion of the braincase.[AAO]") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0000040") Annotation( "AAO"^^xsd:string) "relationship loss: part_of braincase and otic capsule skeleton (AAO:0000052)[AAO]") AnnotationAssertion( ) AnnotationAssertion( "AAO:0000040") AnnotationAssertion( "EMAPA:18706") AnnotationAssertion( "FMA:321630") AnnotationAssertion( "MA:0001463") AnnotationAssertion( "TAO:0000169") AnnotationAssertion(Annotation( "AAO:0000040") "basisphenoid") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006428") AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "\"Endochondral ossification of the ventromedial portion of the braincase.\" [AAO:0000040] // \"An endochondral bone that is located ventral to the pterosphenoid and dorsal to the parasphenoid. Basisphenoid is a median bone that is usually Y-shaped.\" [TAO:0000169]") AnnotationAssertion(rdfs:label "basisphenoid bone") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "MA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "cjm"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (xiphoid cartilage) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A costal cartilage that is part of a xiphoid process.") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0000940") Annotation( "AAO"^^xsd:string) Annotation( "AAO:LAP"^^xsd:string) "Distal, cartilaginous portion of the sternum.[AAO]") AnnotationAssertion( "AAO:0000940") AnnotationAssertion( "EMAPA:18725") AnnotationAssertion( "FMA:32574") AnnotationAssertion( "MA:0001884") AnnotationAssertion(Annotation( "FMA:32574") "cartilage of xiphoid process") AnnotationAssertion( "xiphoid cartilage") AnnotationAssertion(Annotation( "FMA:32574") "xiphoid process cartilage") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "ensiform cartilage") AnnotationAssertion( "UBERON:0006430") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "xiphoid cartilage") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (xiphoid process bone) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A bone tissue that is part of a xiphoid process.") AnnotationAssertion( "FMA:32577") AnnotationAssertion( "GAID:248") AnnotationAssertion(Annotation( "FMA:32577") "bone tissue of xiphoid process") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "xiphoid bone") AnnotationAssertion( "UBERON:0006431") AnnotationAssertion(rdfs:label "xiphoid process bone") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (principal artery to forelimb) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:16811") AnnotationAssertion( "MA:0002024") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "EMAPA:16811") "7th cervical intersegmental artery") AnnotationAssertion(Annotation( ) "7th cervical intersomitic artery") AnnotationAssertion(Annotation( "EMAPA:16811") "axial artery of forelimb") AnnotationAssertion( "UBERON:0006436") AnnotationAssertion(rdfs:label "principal artery to forelimb") SubClassOf( ) # Class: (principal artery to hindlimb) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:16812") AnnotationAssertion( "MA:0002025") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "EMAPA:16812") "5th lumbar intersegmental artery") AnnotationAssertion(Annotation( "EMAPA:16812") "axial artery of hindlimb") AnnotationAssertion( "UBERON:0006438") AnnotationAssertion(rdfs:label "principal artery to hindlimb") SubClassOf( ) # Class: (subhepatic recess) AnnotationAssertion( ) AnnotationAssertion( "FMA:20676") AnnotationAssertion( "hepatic recess") AnnotationAssertion(Annotation( "FMA:20676") "subhepatic space") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006442") AnnotationAssertion(rdfs:label "subhepatic recess") SubClassOf( ) SubClassOf(Annotation( "MA-abduced") ObjectSomeValuesFrom( )) # Class: (prinicipal vein of limb) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006443") AnnotationAssertion(rdfs:label "prinicipal vein of limb") SubClassOf( ) SubClassOf( ) # Class: (annulus fibrosus) AnnotationAssertion(Annotation( "BTO:0003627") "A ring of fibrous or fibrocartilaginous tissue (as of an intervertebral disk or surrounding an orifice of the heart).") AnnotationAssertion(Annotation( "BTO:0003627") "anulus") AnnotationAssertion( "BTO:0003627") AnnotationAssertion( "EMAPA:32670") AnnotationAssertion( "FMA:76704") AnnotationAssertion(Annotation( "FMA:76704") "anulus fibrosus") AnnotationAssertion(Annotation( ) "fibrocartilaginous ring") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0003627") "fibrous ring") AnnotationAssertion( "UBERON:0006444") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "annulus fibrosus") SubClassOf( ) # Class: (caudal middle frontal gyrus) AnnotationAssertion(Annotation( "BIRNLEX:1083") "Component of the middle frontal gyrus. The rostral boundary of the middle frontal gyrus was the rostral extent of the middle frontal gyrus whereas the caudal boundary was the precentral gyrus. The medial and lateral boundaries were designated as the superior frontal sulcus and the inferior frontal sulcus respectively (Christine Fennema-Notestine).") AnnotationAssertion( "BIRNLEX:1083") AnnotationAssertion( "FMA:70688") AnnotationAssertion(Annotation( "BIRNLEX:1083") "caudal middle frontal gyrus") AnnotationAssertion(Annotation( "FMA:70688") "posterior part of middle frontal gyrus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:70688") "caudal part of middle frontal gyrus") AnnotationAssertion( "UBERON:0006445") AnnotationAssertion(rdfs:label "caudal middle frontal gyrus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses(Annotation( "lexical"^^xsd:string) ) # Class: (rostral middle frontal gyrus) AnnotationAssertion(Annotation( "BIRNLEX:1090") "Component of the middle frontal gyrus The rostral boundary is the first appearance of the superior frontal sulcus whereas the caudal boundary is the middle frontal gyrus. The medial and lateral boundaries are the superior frontal sulcus and the inferior frontal sulcus respectively (Christine Fennema-Notestine).") AnnotationAssertion( "BIRNLEX:1090") AnnotationAssertion( "FMA:70687") AnnotationAssertion(Annotation( "FMA:70687") "anterior part of middle frontal gyrus") AnnotationAssertion(Annotation( "BIRNLEX:1090") "rostral middle frontal gyrus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:70687") "rostral part of middle frontal gyrus") AnnotationAssertion( "UBERON:0006446") AnnotationAssertion(rdfs:label "rostral middle frontal gyrus") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (fifth lumbar spinal cord segment) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:1251") AnnotationAssertion( "FMA:71191") AnnotationAssertion(Annotation( "BIRNLEX:1251") "UMLS:C0457871") AnnotationAssertion(Annotation( "FMA:71191") "L5 segment") AnnotationAssertion(Annotation( "BIRNLEX:1251") "L5 spinal cord segment") AnnotationAssertion(Annotation( "BIRNLEX:1251") "fifth lumbar spinal cord segment") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006447") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "fifth lumbar spinal cord segment") SubClassOf( ) # Class: (first lumbar spinal cord segment) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:1336") AnnotationAssertion( "FMA:71187") AnnotationAssertion(Annotation( "BIRNLEX:1336") "UMLS:C0457872") AnnotationAssertion(Annotation( "FMA:71187") "L1 segment") AnnotationAssertion(Annotation( "BIRNLEX:1336") "L1 spinal cord segment") AnnotationAssertion(Annotation( "BIRNLEX:1336") "first lumbar spinal cord segment") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006448") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "first lumbar spinal cord segment") SubClassOf( ) # Class: (third lumbar spinal cord segment) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:1340") AnnotationAssertion( "FMA:71189") AnnotationAssertion(Annotation( "BIRNLEX:1340") "UMLS:C0457874") AnnotationAssertion(Annotation( "FMA:71189") "L3 segment") AnnotationAssertion(Annotation( "BIRNLEX:1340") "L3 spinal cord segment") AnnotationAssertion(Annotation( "BIRNLEX:1340") "third lumbar spinal cord segment") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006449") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "third lumbar spinal cord segment") SubClassOf( ) # Class: (second lumbar spinal cord segment) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:1345") AnnotationAssertion( "FMA:71188") AnnotationAssertion(Annotation( "BIRNLEX:1345") "UMLS:C0457873") AnnotationAssertion(Annotation( "BIRNLEX:1345") "L2 spinal cord segment") AnnotationAssertion(Annotation( "FMA:71188") "l2 segment") AnnotationAssertion(Annotation( "BIRNLEX:1345") "second lumbar spinal cord segment") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006450") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "second lumbar spinal cord segment") SubClassOf( ) # Class: (fourth lumbar spinal cord segment) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:1352") AnnotationAssertion( "FMA:71190") AnnotationAssertion(Annotation( "BIRNLEX:1352") "UMLS:C0457875") AnnotationAssertion(Annotation( "FMA:71190") "L4 segment") AnnotationAssertion(Annotation( "BIRNLEX:1352") "L4 spinal cord segment") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006451") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "fourth lumbar spinal cord segment") SubClassOf( ) # Class: (fourth thoracic spinal cord segment) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:1378") AnnotationAssertion( "FMA:71170") AnnotationAssertion(Annotation( "BIRNLEX:1378") "UMLS:C0457862") AnnotationAssertion(Annotation( "FMA:71170") "T4 segment") AnnotationAssertion(Annotation( "BIRNLEX:1378") "T4 spinal cord segment") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006452") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "fourth thoracic spinal cord segment") SubClassOf( ) # Class: (fifth thoracic spinal cord segment) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:1383") AnnotationAssertion( "FMA:71171") AnnotationAssertion(Annotation( "BIRNLEX:1383") "UMLS:C0457863") AnnotationAssertion(Annotation( "BIRNLEX:1383") "T5 spinal cord segment") AnnotationAssertion(Annotation( "BIRNLEX:1383") "fifth thoracic spinal cord segment") AnnotationAssertion(Annotation( "FMA:71171") "t5 segment") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006453") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "fifth thoracic spinal cord segment") SubClassOf( ) # Class: (sixth thoracic spinal cord segment) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:1387") AnnotationAssertion( "FMA:71172") AnnotationAssertion(Annotation( "BIRNLEX:1387") "UMLS:C0457864") AnnotationAssertion(Annotation( "BIRNLEX:1387") "T6 spinal cord segment") AnnotationAssertion(Annotation( "BIRNLEX:1387") "sixth thoracic spinal cord segment") AnnotationAssertion(Annotation( "FMA:71172") "t6 segment") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006454") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "sixth thoracic spinal cord segment") SubClassOf( ) # Class: (seventh thoracic spinal cord segment) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:1392") AnnotationAssertion( "FMA:71173") AnnotationAssertion(Annotation( "BIRNLEX:1392") "UMLS:C0457865") AnnotationAssertion(Annotation( "BIRNLEX:1392") "T7 spinal cord segment") AnnotationAssertion(Annotation( "BIRNLEX:1392") "seventh thoracic spinal cord segment") AnnotationAssertion(Annotation( "FMA:71173") "t7 segment") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006455") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "seventh thoracic spinal cord segment") SubClassOf( ) # Class: (eighth thoracic spinal cord segment) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:1398") AnnotationAssertion( "FMA:71174") AnnotationAssertion(Annotation( "BIRNLEX:1398") "UMLS:C0457866") AnnotationAssertion(Annotation( "BIRNLEX:1398") "T8 spinal cord segment") AnnotationAssertion(Annotation( "BIRNLEX:1398") "eighth thoracic spinal cord segment") AnnotationAssertion(Annotation( "FMA:71174") "t8 segment") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006456") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "eighth thoracic spinal cord segment") SubClassOf( ) # Class: (first thoracic spinal cord segment) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:1452") AnnotationAssertion( "FMA:62421") AnnotationAssertion(Annotation( "BIRNLEX:1452") "UMLS:C0457859") AnnotationAssertion(Annotation( "BIRNLEX:1452") "T1 spinal cord segment") AnnotationAssertion(Annotation( "BIRNLEX:1452") "first thoracic spinal cord segment") AnnotationAssertion(Annotation( "FMA:62421") "t1 segment") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006457") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "first thoracic spinal cord segment") SubClassOf( ) # Class: (second thoracic spinal cord segment) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:1454") AnnotationAssertion( "FMA:62422") AnnotationAssertion(Annotation( "BIRNLEX:1454") "UMLS:C0457860") AnnotationAssertion(Annotation( "BIRNLEX:1454") "T2 spinal cord segment") AnnotationAssertion(Annotation( "BIRNLEX:1454") "second thoracic spinal cord segment") AnnotationAssertion(Annotation( "FMA:62422") "t2 segment") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006458") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "second thoracic spinal cord segment") SubClassOf( ) # Class: (third thoracic spinal cord segment) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:1458") AnnotationAssertion( "FMA:71169") AnnotationAssertion(Annotation( "BIRNLEX:1458") "UMLS:C0457861") AnnotationAssertion(Annotation( "BIRNLEX:1458") "T3 spinal cord segment") AnnotationAssertion(Annotation( "FMA:71169") "t3 segment") AnnotationAssertion(Annotation( "BIRNLEX:1458") "third thoracic spinal cord segment") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006459") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "third thoracic spinal cord segment") SubClassOf( ) # Class: (first sacral spinal cord segment) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:1532") AnnotationAssertion( "FMA:256625") AnnotationAssertion(Annotation( "BIRNLEX:1532") "UMLS:C0457876") AnnotationAssertion(Annotation( "FMA:256625") "S1 segment") AnnotationAssertion(Annotation( "BIRNLEX:1532") "S1 spinal cord segment") AnnotationAssertion(Annotation( "BIRNLEX:1532") "first sacral spinal cord segment") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006460") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "first sacral spinal cord segment") SubClassOf( ) # Class: (second sacral spinal cord segment) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:1539") AnnotationAssertion( "FMA:256627") AnnotationAssertion(Annotation( "BIRNLEX:1539") "UMLS:C0457877") AnnotationAssertion(Annotation( "FMA:256627") "S2 segment") AnnotationAssertion(Annotation( "BIRNLEX:1539") "S2 spinal cord segment") AnnotationAssertion(Annotation( "BIRNLEX:1539") "second sacral spinal cord segment") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006461") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "second sacral spinal cord segment") SubClassOf( ) # Class: (third sacral spinal cord segment) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:1544") AnnotationAssertion( "FMA:256629") AnnotationAssertion(Annotation( "BIRNLEX:1544") "UMLS:C0457878") AnnotationAssertion(Annotation( "FMA:256629") "S3 segment") AnnotationAssertion(Annotation( "BIRNLEX:1544") "S3 spinal cord segment") AnnotationAssertion(Annotation( "BIRNLEX:1544") "third sacral spinal cord segment") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006462") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "third sacral spinal cord segment") SubClassOf( ) # Class: (fourth sacral spinal cord segment) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:1548") AnnotationAssertion( "FMA:256631") AnnotationAssertion(Annotation( "BIRNLEX:1548") "UMLS:C0457879") AnnotationAssertion(Annotation( "FMA:256631") "S4 segment") AnnotationAssertion(Annotation( "BIRNLEX:1548") "S4 spinal cord segment") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006463") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "fourth sacral spinal cord segment") SubClassOf( ) # Class: (fifth sacral spinal cord segment) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:1553") AnnotationAssertion( "FMA:256633") AnnotationAssertion(Annotation( "BIRNLEX:1553") "UMLS:C0457880") AnnotationAssertion(Annotation( "FMA:256633") "S5 segment") AnnotationAssertion(Annotation( "BIRNLEX:1553") "S5 spinal cord segment") AnnotationAssertion(Annotation( "BIRNLEX:1553") "fifth sacral spinal cord segment") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006464") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "fifth sacral spinal cord segment") SubClassOf( ) # Class: (ninth thoracic spinal cord segment) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:1584") AnnotationAssertion( "FMA:71175") AnnotationAssertion(Annotation( "BIRNLEX:1584") "UMLS:C0457867") AnnotationAssertion(Annotation( "BIRNLEX:1584") "T9 spinal cord segment") AnnotationAssertion(Annotation( "BIRNLEX:1584") "ninth thoracic spinal cord segment") AnnotationAssertion(Annotation( "FMA:71175") "t9 segment") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006465") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "ninth thoracic spinal cord segment") SubClassOf( ) # Class: (tenth thoracic spinal cord segment) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:1591") AnnotationAssertion( "FMA:71176") AnnotationAssertion(Annotation( "BIRNLEX:1591") "UMLS:C0457868") AnnotationAssertion(Annotation( "BIRNLEX:1591") "T10 spinal cord segment") AnnotationAssertion(Annotation( "FMA:71176") "t10 segment") AnnotationAssertion(Annotation( "BIRNLEX:1591") "tenth thoracic spinal cord segment") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006466") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "tenth thoracic spinal cord segment") SubClassOf( ) # Class: (eleventh thoracic spinal cord segment) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:1596") AnnotationAssertion( "FMA:71177") AnnotationAssertion(Annotation( "BIRNLEX:1596") "UMLS:C0457869") AnnotationAssertion(Annotation( "BIRNLEX:1596") "T11 spinal cord segment") AnnotationAssertion(Annotation( "BIRNLEX:1596") "eleventh thoracic spinal cord segment") AnnotationAssertion(Annotation( "FMA:71177") "t11 segment") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006467") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "eleventh thoracic spinal cord segment") SubClassOf( ) # Class: (twelfth thoracic spinal cord segment) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:1598") AnnotationAssertion( "FMA:71178") AnnotationAssertion(Annotation( "BIRNLEX:1598") "UMLS:C0457870") AnnotationAssertion(Annotation( "BIRNLEX:1598") "T12 spinal cord segment") AnnotationAssertion(Annotation( "FMA:71178") "t12 segment") AnnotationAssertion(Annotation( "BIRNLEX:1598") "twelfth thoracic spinal cord segment") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006468") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "twelfth thoracic spinal cord segment") SubClassOf( ) # Class: (C1 segment of cervical spinal cord) AnnotationAssertion(Annotation( ) "The segment of the spinal cord that corresponds to the first cervical vertebra in most mammals.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:1694") AnnotationAssertion( "FMA:71179") AnnotationAssertion(Annotation( "BIRNLEX:1694") "UMLS:C0457851") AnnotationAssertion( "C1 cervical spinal cord") AnnotationAssertion(Annotation( "FMA:71179") "C1 segment") AnnotationAssertion(Annotation( "BIRNLEX:1694") "C1 spinal cord segment") AnnotationAssertion(Annotation( "BIRNLEX:1694") "first cervical spinal cord segment") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006469") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "C1 segment of cervical spinal cord") SubClassOf( ) # Class: (C8 segment of cervical spinal cord) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:1696") AnnotationAssertion( "FMA:71186") AnnotationAssertion(Annotation( "BIRNLEX:1696") "UMLS:C0457858") AnnotationAssertion(Annotation( "FMA:71186") "C8 segment") AnnotationAssertion(Annotation( "BIRNLEX:1696") "C8 spinal cord segment") AnnotationAssertion(Annotation( "BIRNLEX:1696") "eighth cervical spinal cord segment") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006470") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "C8 segment of cervical spinal cord") SubClassOf( ) # Class: (Brodmann (1909) area 5) AnnotationAssertion(Annotation( ) "Brodmann area 5 is one of Brodmann's cytologically defined regions of the brain. It is involved in somatosensory processing and association.") AnnotationAssertion(Annotation( "BIRNLEX:1736") Annotation( "NIFSTD:SumsDB_abbrevSource"^^xsd:string) Annotation( ) "B09-5") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:1736") AnnotationAssertion( "FMA:68601") AnnotationAssertion(Annotation( "BIRNLEX:1736") "UMLS:C1272527") AnnotationAssertion(Annotation( "BIRNLEX:1736") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=1015") AnnotationAssertion(Annotation( "BIRNLEX:1736") "B09-5") AnnotationAssertion(Annotation( ) "BA5") AnnotationAssertion(Annotation( "BIRNLEX:1736") "Brodmann (1909) area 5") AnnotationAssertion(Annotation( "FMA:68601") "Brodmann area 5") AnnotationAssertion(Annotation( "BIRNLEX:1736") "Brodmann area 5, preparietal") AnnotationAssertion(Annotation( "BIRNLEX:1736") "area 5 of Brodmann-1909") AnnotationAssertion(Annotation( "BIRNLEX:1736") "area praeparietalis") AnnotationAssertion(Annotation( "FMA:68601") "preparietal area 5") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:68601") "area 5 of Brodmann") AnnotationAssertion(Annotation( "NeuroNames:1015") "area 5 of Brodmann (guenon)") AnnotationAssertion(Annotation( "NeuroNames:1015") "brodmann's area 5") AnnotationAssertion(Annotation( "NeuroNames:1015") "preparietal area") AnnotationAssertion(Annotation( ) "preparietal area 5") AnnotationAssertion(Annotation( ) "secondary somatosensory cortex") AnnotationAssertion( "UBERON:0006471") AnnotationAssertion(rdfs:label "Brodmann (1909) area 5") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/5/52/Brodmann_areas_5.png"^^xsd:anyURI) SubClassOf( ) # Class: (Brodmann (1909) area 6) AnnotationAssertion(Annotation( ) "Brodmann area 6, or BA6, is part of the frontal cortex in the human brain. Situated just anterior to the primary motor cortex, it is composed of the premotor cortex and, medially, the supplementary motor area, or SMA. This large area of the frontal cortex is believed to play a role in the planning of complex, coordinated movements. Brodmann area 6 is also called agranular frontal area 6 in humans because it lacks an internal granular cortical layer (layer IV). It is a subdivision of the cytoarchitecturally defined precentral region of cerebral cortex. In the human brain, it is located on the portions of the precentral gyrus that are not occupied by the gigantopyramidal area 4; furthermore, BA6 extends onto the caudal portions of the superior frontal and middle frontal gyri. It extends from the cingulate sulcus on the medial aspect of the hemisphere to the lateral sulcus on the lateral aspect. It is bounded rostrally by the granular frontal region and caudally by the gigantopyramidal area 4 (Brodmann, 1909).") AnnotationAssertion(Annotation( "BIRNLEX:1737") Annotation( "NIFSTD:SumsDB_abbrevSource"^^xsd:string) Annotation( ) "B09-6") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:1737") AnnotationAssertion( "FMA:68602") AnnotationAssertion(Annotation( "BIRNLEX:1737") "UMLS:C1272528") AnnotationAssertion(Annotation( "BIRNLEX:1737") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=1020") AnnotationAssertion(Annotation( "BIRNLEX:1737") "B09-6") AnnotationAssertion(Annotation( ) "BA6") AnnotationAssertion(Annotation( "BIRNLEX:1737") "Brodmann (1909) area 6") AnnotationAssertion(Annotation( "FMA:68602") "Brodmann area 6") AnnotationAssertion(Annotation( "BIRNLEX:1737") "Brodmann area 6, agranular frontal") AnnotationAssertion(Annotation( "FMA:68602") "agranular frontal area 6") AnnotationAssertion(Annotation( "FMA:68602") "area 6 of Brodmann") AnnotationAssertion(Annotation( "BIRNLEX:1737") "area 6 of Brodmann-1909") AnnotationAssertion(Annotation( "BIRNLEX:1737") "area frontalis agranularis") AnnotationAssertion(Annotation( "FMA:68602") "frontal belt") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:1020") "agranular frontal area") AnnotationAssertion(Annotation( ) "agranular frontal area 6") AnnotationAssertion(Annotation( "NeuroNames:1020") "area 6 of Brodmann (guenon)") AnnotationAssertion(Annotation( "NeuroNames:1020") "brodmann's area 6") AnnotationAssertion( "UBERON:0006472") AnnotationAssertion(rdfs:label "Brodmann (1909) area 6") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/1/11/Brodmann_areas_6.png"^^xsd:anyURI) SubClassOf( ) # Class: (Brodmann (1909) area 18) AnnotationAssertion(Annotation( "BIRNLEX:1749") Annotation( "NIFSTD:SumsDB_abbrevSource"^^xsd:string) Annotation( ) "B09-18") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:1749") AnnotationAssertion( "DHBA:10271") AnnotationAssertion( "FMA:68615") AnnotationAssertion( "PBA:10039") AnnotationAssertion(Annotation( "BIRNLEX:1749") "UMLS:C1272536") AnnotationAssertion(Annotation( "BIRNLEX:1749") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=1027") AnnotationAssertion(Annotation( "BIRNLEX:1749") "B09-18") AnnotationAssertion(Annotation( ) "BA18") AnnotationAssertion(Annotation( "BIRNLEX:1749") "Brodmann (1909) area 18") AnnotationAssertion(Annotation( "FMA:68615") "Brodmann area 18") AnnotationAssertion(Annotation( "BIRNLEX:1749") "Brodmann area 18, parastriate") AnnotationAssertion(Annotation( "FMA:68615") "Brodmann's area 18") AnnotationAssertion(Annotation( "FMA:68615") "area 18 of Brodmann") AnnotationAssertion(Annotation( "BIRNLEX:1749") "area 18 of Brodmann-1909") AnnotationAssertion(Annotation( ) Annotation( ) "area parastriata") AnnotationAssertion(Annotation( "BIRNLEX:1749") "area parastriata") AnnotationAssertion(Annotation( "FMA:68615") "parastriate area 18") AnnotationAssertion(Annotation( "FMA:68615") "secondary visual area") AnnotationAssertion(Annotation( "FMA:68615") "visual area II") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "V2") AnnotationAssertion(Annotation( "NeuroNames:1027") "area 18 of Brodmann (guenon)") AnnotationAssertion(Annotation( "NeuroNames:1027") Annotation( ) "area occipitalis") AnnotationAssertion(Annotation( "NeuroNames:1027") "occipital area") AnnotationAssertion(Annotation( ) "visual area two") AnnotationAssertion( "UBERON:0006473") AnnotationAssertion(rdfs:label "Brodmann (1909) area 18") SubClassOf( ) SubClassOf(Annotation( "WP"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (Brodmann (1909) area 30) AnnotationAssertion(Annotation( ) "Brodmann area 30, also known as agranular retrolimbic area 30, is a subdivision of the cytoarchitecturally defined retrosplenial region of the cerebral cortex. In the human it is located in the isthmus of cingulate gyrus. Cytoarchitecturally it is bounded internally by the granular retrolimbic area 29, dorsally by the ventral posterior cingulate area 23 and ventrolaterally by the ectorhinal area 36 (Brodmann-1909).") AnnotationAssertion(Annotation( "BIRNLEX:1764") Annotation( "NIFSTD:SumsDB_abbrevSource"^^xsd:string) Annotation( ) "B09-30") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:1764") AnnotationAssertion( "FMA:68627") AnnotationAssertion(Annotation( "BIRNLEX:1764") "UMLS:C1272491") AnnotationAssertion(Annotation( "BIRNLEX:1764") "B09-30") AnnotationAssertion(Annotation( ) "BA30") AnnotationAssertion(Annotation( "BIRNLEX:1764") "Brodmann (1909) area 30") AnnotationAssertion(Annotation( "FMA:68627") "Brodmann area 30") AnnotationAssertion(Annotation( "BIRNLEX:1764") "Brodmann area 30, agranular retrolimbic") AnnotationAssertion(Annotation( "FMA:68627") "Brodmann's area 30") AnnotationAssertion(Annotation( "FMA:68627") "agranular retrolimbic area 30") AnnotationAssertion(Annotation( "FMA:68627") "area 30 of Brodmann") AnnotationAssertion(Annotation( "BIRNLEX:1764") "area 30 of Brodmann-1909") AnnotationAssertion(Annotation( "BIRNLEX:1764") "area retrolimbica agranularis") AnnotationAssertion(Annotation( ) Annotation( ) "area retrosplenialis agranularis") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006474") AnnotationAssertion(rdfs:label "Brodmann (1909) area 30") SubClassOf( ) # Class: (Brodmann (1909) area 31) AnnotationAssertion(Annotation( ) "Brodmann area 31, also known as dorsal posterior cingulate area 31, is a subdivision of the cytoarchitecturally defined cingulate region of the cerebral cortex. In the human it occupies portions of the posterior cingulate gyrus and medial aspect of the parietal lobe. Approximate boundaries are the cingulate sulcus dorsally and the parieto-occipital sulcus caudally. It partially surrounds the subparietal sulcus, the ventral continuation of the cingulate sulcus in the parietal lobe. Cytoarchitecturally it is bounded rostrally by the ventral anterior cingulate area 24, ventrally by the ventral posterior cingulate area 23, dorsally by the gigantopyramidal area 4 and preparietal area 5 and caudally by the superior parietal area 7 (H) (Brodmann-1909).") AnnotationAssertion(Annotation( "BIRNLEX:1765") Annotation( "NIFSTD:SumsDB_abbrevSource"^^xsd:string) Annotation( ) "B09-31") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:1765") AnnotationAssertion( "FMA:68628") AnnotationAssertion(Annotation( "BIRNLEX:1765") "UMLS:C1272492") AnnotationAssertion(Annotation( "BIRNLEX:1765") "B09-31") AnnotationAssertion(Annotation( ) "BA31") AnnotationAssertion(Annotation( "BIRNLEX:1765") "Brodmann (1909) area 31") AnnotationAssertion(Annotation( "FMA:68628") "Brodmann area 31") AnnotationAssertion(Annotation( "BIRNLEX:1765") "Brodmann area 31, dorsal posterior cingulate") AnnotationAssertion(Annotation( "FMA:68628") "Brodmann's area 31") AnnotationAssertion(Annotation( "FMA:68628") "area 31 of Brodmann") AnnotationAssertion(Annotation( "BIRNLEX:1765") "area 31 of Brodmann-1909") AnnotationAssertion(Annotation( ) Annotation( ) "area cingularis posterior dorsalis") AnnotationAssertion(Annotation( "BIRNLEX:1765") "area cingularis posterior dorsalis") AnnotationAssertion(Annotation( "FMA:68628") "cinguloparietal transition area") AnnotationAssertion(Annotation( "FMA:68628") "dorsal posterior cingulate area 31") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006475") AnnotationAssertion(rdfs:label "Brodmann (1909) area 31") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/e/ed/Brodmann_Cytoarchitectonics_31.png"^^xsd:anyURI) SubClassOf( ) # Class: (Brodmann (1909) area 33) AnnotationAssertion(Annotation( ) "Brodmann area 33, also known as pregenual area 33, is a subdivision of the cytoarchitecturally defined cingulate region of cerebral cortex. It is a narrow band located in the anterior cingulate gyrus adjacent to the supracallosal gyrus in the depth of the callosal sulcus, near the genu of the corpus callosum. Cytoarchitecturally it is bounded by the ventral anterior cingulate area 24 and the supracallosal gyrus (Brodmann-1909).") AnnotationAssertion(Annotation( "BIRNLEX:1766") Annotation( "NIFSTD:SumsDB_abbrevSource"^^xsd:string) Annotation( ) "B09-33") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:1766") AnnotationAssertion( "FMA:68630") AnnotationAssertion(Annotation( "BIRNLEX:1766") "UMLS:C1272494") AnnotationAssertion(Annotation( "BIRNLEX:1766") "B09-33") AnnotationAssertion(Annotation( ) "BA33") AnnotationAssertion(Annotation( "BIRNLEX:1766") "Brodmann (1909) area 33") AnnotationAssertion(Annotation( "FMA:68630") "Brodmann area 33") AnnotationAssertion(Annotation( "BIRNLEX:1766") "Brodmann area 33, pregenual") AnnotationAssertion(Annotation( "FMA:68630") "Brodmann's area 33") AnnotationAssertion(Annotation( "FMA:68630") "area 33 of Brodmann") AnnotationAssertion(Annotation( "BIRNLEX:1766") "area 33 of Brodmann-1909") AnnotationAssertion(Annotation( ) Annotation( ) "area praegenualis") AnnotationAssertion(Annotation( "BIRNLEX:1766") "area praegenualis") AnnotationAssertion(Annotation( "FMA:68630") "pregenual area 33") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006476") AnnotationAssertion(rdfs:label "Brodmann (1909) area 33") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (Brodmann (1909) area 34) AnnotationAssertion(Annotation( ) "Brodmann area 34 is a part of the brain. It has been described as part of the entorhinal area. It has been described as part of the superior temporal gyrus.") AnnotationAssertion(Annotation( "BIRNLEX:1767") Annotation( "NIFSTD:SumsDB_abbrevSource"^^xsd:string) Annotation( ) "B09-34") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:1767") AnnotationAssertion( "FMA:68631") AnnotationAssertion(Annotation( "BIRNLEX:1767") "UMLS:C1272495") AnnotationAssertion(Annotation( "BIRNLEX:1767") "B09-34") AnnotationAssertion(Annotation( ) "BA34") AnnotationAssertion(Annotation( "BIRNLEX:1767") "Brodmann (1909) area 34") AnnotationAssertion(Annotation( "FMA:68631") "Brodmann area 34") AnnotationAssertion(Annotation( "BIRNLEX:1767") "Brodmann area 34, dorsal entorhinal") AnnotationAssertion(Annotation( "FMA:68631") "area 34 of Brodmann") AnnotationAssertion(Annotation( "BIRNLEX:1767") "area 34 of Brodmann-1909") AnnotationAssertion(Annotation( ) Annotation( ) "area entorhinalis dorsalis") AnnotationAssertion(Annotation( "BIRNLEX:1767") "area entorhinalis dorsalis") AnnotationAssertion(Annotation( "FMA:68631") "dorsal entorhinal area 34") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006477") AnnotationAssertion(rdfs:label "Brodmann (1909) area 34") SubClassOf( ) # Class: (Brodmann (1909) area 37) AnnotationAssertion(Annotation( ) "Brodmann area 37, or BA37, is part of the temporal cortex in the human brain. This area is known as occipitotemporal area 37 (H). It is a subdivision of the cytoarchitecturally defined temporal region of cerebral cortex. It is located primarily in the caudal portions of the fusiform gyrus and inferior temporal gyrus on the mediobasal and lateral surfaces at the caudal extreme of the temporal lobe. Cytoarchitecturally it is bounded caudally by the peristriate Brodmann area 19, rostrally by the inferior temporal area 20 and middle temporal area 21 and dorsally on the lateral aspect of the hemisphere by the angular area 39 (H) (Brodmann-1909).") AnnotationAssertion(Annotation( "BIRNLEX:1770") Annotation( "NIFSTD:SumsDB_abbrevSource"^^xsd:string) Annotation( ) "B09-37") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:1770") AnnotationAssertion( "FMA:68634") AnnotationAssertion(Annotation( "BIRNLEX:1770") "UMLS:C1272498") AnnotationAssertion(Annotation( "BIRNLEX:1770") "B09-37") AnnotationAssertion(Annotation( ) "BA37") AnnotationAssertion(Annotation( "BIRNLEX:1770") "Brodmann (1909) area 37") AnnotationAssertion(Annotation( "FMA:68634") "Brodmann area 37") AnnotationAssertion(Annotation( "BIRNLEX:1770") "Brodmann area 37, occipitotemporal") AnnotationAssertion(Annotation( "FMA:68634") "area 37 0f brodmann") AnnotationAssertion(Annotation( "BIRNLEX:1770") "area 37 of Brodmann-1909") AnnotationAssertion(Annotation( ) Annotation( ) "area occipitotemporalis") AnnotationAssertion(Annotation( "BIRNLEX:1770") "area occipitotemporalis") AnnotationAssertion(Annotation( "FMA:68634") "occipitotemporal area 37") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006478") AnnotationAssertion(rdfs:label "Brodmann (1909) area 37") SubClassOf( ) # Class: (Brodmann (1909) area 38) AnnotationAssertion(Annotation( ) "Brodmann area 38, also BA38 or temporopolar area 38 (H), is part of the temporal cortex in the human brain. BA 38 is at the anterior end of the temporal lobe, known as the temporal pole. BA38 is a subdivision of the cytoarchitecturally defined temporal region of cerebral cortex. It is located primarily in the most rostral portions of the superior temporal gyrus and the middle temporal gyrus. Cytoarchitecturally it is bounded caudally by the inferior temporal area 20, the middle temporal area 21, the superior temporal area 22 and the ectorhinal area 36 (Brodmann-1909). Cytoarchitectonic and chemoarchitectonic studies find that it contains at least seven subareas, one of which, TG, is unique to humans. 'The functional significance of this area TG is not known, but it may bind complex, highly processed perceptual inputs to visceral emotional responses.' This area is among the earliest affected by Alzheimer's disease and the earliest involved at the start of temporal lobe seizures. [.") AnnotationAssertion(Annotation( "BIRNLEX:1771") Annotation( "NIFSTD:SumsDB_abbrevSource"^^xsd:string) Annotation( ) "B09-38") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:1771") AnnotationAssertion( "FMA:68635") AnnotationAssertion(Annotation( "BIRNLEX:1771") "UMLS:C1272499") AnnotationAssertion(Annotation( "BIRNLEX:1771") "B09-38") AnnotationAssertion(Annotation( ) "BA38") AnnotationAssertion(Annotation( "BIRNLEX:1771") "Brodmann (1909) area 38") AnnotationAssertion(Annotation( "FMA:68635") "Brodmann area 38") AnnotationAssertion(Annotation( "BIRNLEX:1771") "Brodmann area 38, temporopolar") AnnotationAssertion(Annotation( "FMA:68635") "area 38 of Brodmann") AnnotationAssertion(Annotation( "BIRNLEX:1771") "area 38 of Brodmann-1909") AnnotationAssertion(Annotation( "BIRNLEX:1771") "area temporopolaris") AnnotationAssertion(Annotation( "FMA:68635") "temporopolar area 38") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006479") AnnotationAssertion(rdfs:label "Brodmann (1909) area 38") SubClassOf( ) # Class: (Brodmann (1909) area 39) AnnotationAssertion(Annotation( "BIRNLEX:1772") Annotation( "NIFSTD:SumsDB_abbrevSource"^^xsd:string) Annotation( ) "B09-39") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:1772") AnnotationAssertion( "FMA:68636") AnnotationAssertion(Annotation( "BIRNLEX:1772") "UMLS:C1272500") AnnotationAssertion(Annotation( "BIRNLEX:1772") "B09-39") AnnotationAssertion(Annotation( ) "BA39") AnnotationAssertion(Annotation( "BIRNLEX:1772") "Brodmann (1909) area 39") AnnotationAssertion(Annotation( "FMA:68636") "Brodmann area 39") AnnotationAssertion(Annotation( "BIRNLEX:1772") "Brodmann area 39, angular") AnnotationAssertion(Annotation( "FMA:68636") "angular area 39") AnnotationAssertion(Annotation( "FMA:68636") "area 39 of Brodmann") AnnotationAssertion(Annotation( "BIRNLEX:1772") "area 39 of Brodmann-1909") AnnotationAssertion(Annotation( "BIRNLEX:1772") "area angularis") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006480") AnnotationAssertion(rdfs:label "Brodmann (1909) area 39") SubClassOf( ) # Class: (Brodmann (1909) area 44) AnnotationAssertion(Annotation( ) "Brodmann area 44, or BA44, is part of the frontal cortex in the human brain. Situated just anterior to premotor cortex and on the lateral surface, inferior to BA9. This area is also known as pars opercularis (of the inferior frontal gyrus), and it refers to a subdivision of the cytoarchitecturally defined frontal region of cerebral cortex. In the human it corresponds approximately to the opercular part of inferior frontal gyrus (H). Thus, it is bounded caudally by the inferior precentral sulcus (H) and rostrally by the anterior ascending limb of lateral sulcus (H). It surrounds the diagonal sulcus (H). In the depth of the lateral sulcus it borders on the insula. Cytoarchitectonically it is bounded caudally and dorsally by the agranular frontal area 6, dorsally by the granular frontal area 9 and rostrally by the triangular area 45 (Brodmann-1909).") AnnotationAssertion(Annotation( "BIRNLEX:1776") Annotation( "NIFSTD:SumsDB_abbrevSource"^^xsd:string) Annotation( ) "B09-44") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:1776") AnnotationAssertion( "FMA:68641") AnnotationAssertion(Annotation( "BIRNLEX:1776") "UMLS:C1272509") AnnotationAssertion(Annotation( "BIRNLEX:1776") "B09-44") AnnotationAssertion(Annotation( ) "BA44") AnnotationAssertion(Annotation( "BIRNLEX:1776") "Brodmann (1909) area 44") AnnotationAssertion(Annotation( "FMA:68641") "Brodmann area 44") AnnotationAssertion(Annotation( "BIRNLEX:1776") "Brodmann area 44, opercular") AnnotationAssertion(Annotation( "FMA:68641") "area 44 of Brodmann") AnnotationAssertion(Annotation( "BIRNLEX:1776") "area 44 of Brodmann-1909") AnnotationAssertion(Annotation( "BIRNLEX:1776") "area opercularis") AnnotationAssertion(Annotation( "FMA:68641") "opercular area 44") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006481") AnnotationAssertion(rdfs:label "Brodmann (1909) area 44") SubClassOf( ) # Class: (Brodmann (1909) area 45) AnnotationAssertion(Annotation( "BIRNLEX:1777") "Part of the cytoarchitecturally defined frontal region of cerebral cortex. In the human, it occupies the triangular part of the inferior frontal gyrus (human) and, surrounding the anterior horizontal limb of the lateral sulcus (human), a portion of the orbital part of the inferior frontal gyrus (human). Bounded caudally by the anterior ascending limb of the lateral sulcus (human), it borders on the insula in the depth of the lateral sulcus. Cytoarchitectonically it is bounded caudally by the opercular area 44, rostrodorsally by the area 46 of Brodmann (human) and ventrally by the area 47 of Brodmann (human) (Brodmann-1909) (Adapted from Brain Info).") AnnotationAssertion(Annotation( ) "Brodmann area 45 (BA45), is part of the frontal cortex in the human brain. Situated on the lateral surface, inferior to BA9 and adjacent to BA46. This area is also known as pars triangular (of the inferior frontal gyrus). In the human, it occupies the triangular part of inferior frontal gyrus (H) and, surrounding the anterior horizontal limb of lateral sulcus (H), a portion of the orbital part of inferior frontal gyrus (H). Bounded caudally by the anterior ascending limb of lateral sulcus (H), it borders on the insula in the depth of the lateral sulcus. In terms of cytoarchitecture, it is bounded caudally by the opercular area 44 (BA44), rostrodorsally by the middle frontal area 46 (BA46), and ventrally by the orbital area 47 (BA47) (Brodmann-1909)[Wikipedia:Brodmann_area_45].") AnnotationAssertion(Annotation( "BIRNLEX:1777") Annotation( "NIFSTD:SumsDB_abbrevSource"^^xsd:string) Annotation( ) "B09-45") AnnotationAssertion(Annotation( "BIRNLEX:1777") Annotation( "NIFSTD:SumsDB_abbrevSource"^^xsd:string) Annotation( ) "BA45") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:1777") AnnotationAssertion( "FMA:68642") AnnotationAssertion(Annotation( "BIRNLEX:1777") "UMLS:C1272511") AnnotationAssertion(Annotation( "BIRNLEX:1777") "B09-45") AnnotationAssertion(Annotation( ) "BA45") AnnotationAssertion(Annotation( "BIRNLEX:1777") "Brodmann (1909) area 45") AnnotationAssertion(Annotation( "FMA:68642") "Brodmann area 45") AnnotationAssertion(Annotation( "BIRNLEX:1777") "Brodmann area 45, triangular") AnnotationAssertion(Annotation( "FMA:68642") "area 45 of Brodmann") AnnotationAssertion(Annotation( "BIRNLEX:1777") "area 45 of Brodmann-1909") AnnotationAssertion(Annotation( ) Annotation( ) "area triangularis") AnnotationAssertion(Annotation( "BIRNLEX:1777") "area triangularis") AnnotationAssertion(Annotation( "FMA:68642") "triangular area 45") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006482") AnnotationAssertion(rdfs:label "Brodmann (1909) area 45") SubClassOf( ) SubClassOf(Annotation( "NIFSTD"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (Brodmann (1909) area 46) AnnotationAssertion(Annotation( ) "Brodmann area 46, or BA46, is part of the frontal cortex in the human brain. It is between BA10 and BA45. BA46 is known as middle frontal area 46. In the human it occupies approximately the middle third of the middle frontal gyrus and the most rostral portion of the inferior frontal gyrus. Brodmann area 46 roughly corresponds with the dorsolateral prefrontal cortex (DLPFC), although the borders of area 46 are based on cytoarchitecture rather than function. The DLPFC also encompasses part of granular frontal area 9, directly adjacent on the dorsal surface of the cortex. Cytoarchitecturally, BA46 is bounded dorsally by the granular frontal area 9, rostroventrally by the frontopolar area 10 and caudally by the triangular area 45 (Brodmann-1909). There is some discrepancy between the extent of BA8 (Brodmann-1905) and the same area as described by Walker (1940).") AnnotationAssertion(Annotation( "BIRNLEX:1778") Annotation( "NIFSTD:SumsDB_abbrevSource"^^xsd:string) Annotation( ) "B09-46") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:1778") AnnotationAssertion( "FMA:68643") AnnotationAssertion(Annotation( "BIRNLEX:1778") "UMLS:C1272512") AnnotationAssertion(Annotation( "BIRNLEX:1778") "B09-46") AnnotationAssertion(Annotation( ) "BA46") AnnotationAssertion(Annotation( "BIRNLEX:1778") "Brodmann (1909) area 46") AnnotationAssertion(Annotation( "FMA:68643") "Brodmann area 46") AnnotationAssertion(Annotation( "BIRNLEX:1778") "Brodmann area 46, middle frontal") AnnotationAssertion(Annotation( "FMA:68643") "area 46 of Brodmann") AnnotationAssertion(Annotation( "BIRNLEX:1778") "area 46 of Brodmann-1909") AnnotationAssertion(Annotation( "BIRNLEX:1778") "area frontalis media") AnnotationAssertion(Annotation( "FMA:68643") "middle frontal area 46") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:68643") "area 46") AnnotationAssertion(Annotation( ) "middle frontal area 46") AnnotationAssertion( "UBERON:0006483") AnnotationAssertion(rdfs:label "Brodmann (1909) area 46") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/c/cd/Brodmann_area_46.png"^^xsd:anyURI) SubClassOf( ) # Class: (Brodmann (1909) area 47) AnnotationAssertion(Annotation( ) "Brodmann area 47, or BA47, is part of the frontal cortex in the human brain. Curving from the lateral surface of the frontal lobe into the ventral (orbital) frontal cortex. It is below areas BA10 and BA45, and beside BA11. This area is also known as orbital area 47. In the human, on the orbital surface it surrounds the caudal portion of the orbital sulcus (H) from which it extends laterally into the orbital part of inferior frontal gyrus (H). Cytoarchitectonically it is bounded caudally by the triangular area 45, medially by the prefrontal area 11 of Brodmann-1909, and rostrally by the frontopolar area 10 (Brodmann-1909). It incorporates the region that Brodmann identified as 'Area 12' in the monkey, and therefore, following the suggestion of Michael Petrides, some contemporary neuroscientists refer to the region as 'BA47/12. ' BA47 has been implicated in the processing of syntax in spoken and signed languages, and more recently in musical syntax.") AnnotationAssertion(Annotation( "BIRNLEX:1779") Annotation( "NIFSTD:SumsDB_abbrevSource"^^xsd:string) Annotation( ) "B09-47") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:1779") AnnotationAssertion( "FMA:68644") AnnotationAssertion(Annotation( "BIRNLEX:1779") "UMLS:C1272513") AnnotationAssertion(Annotation( "BIRNLEX:1779") "B09-47") AnnotationAssertion(Annotation( ) "BA47") AnnotationAssertion(Annotation( "BIRNLEX:1779") "Brodmann (1909) area 47") AnnotationAssertion(Annotation( "FMA:68644") "Brodmann area 47") AnnotationAssertion(Annotation( "BIRNLEX:1779") "Brodmann area 47, orbital") AnnotationAssertion(Annotation( "FMA:68644") "area 47 of Brodmann") AnnotationAssertion(Annotation( "BIRNLEX:1779") "area 47 of Brodmann-1909") AnnotationAssertion(Annotation( ) Annotation( ) "area orbitalis") AnnotationAssertion(Annotation( "BIRNLEX:1779") "area orbitalis") AnnotationAssertion(Annotation( "FMA:68644") "orbital area 47") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006484") AnnotationAssertion(rdfs:label "Brodmann (1909) area 47") SubClassOf( ) # Class: (Brodmann (1909) area 48) AnnotationAssertion(Annotation( ) "Retrosubicular area 48 is a subdivision of the cytoarchitecturally defined hippocampal region of the cerebral cortex. In the human it is located on the medial surface of the temporal lobe. Cytoarchitectually it is bounded rostrally by the perirhinal area 35 and medially by the presubiculum. While described by Brodmann (Brodmann-1909), it was not included in his areal maps of human cortex (Brodmann-1909; Brodmann-1910).") AnnotationAssertion(Annotation( "BIRNLEX:1791") Annotation( "NIFSTD:SumsDB_abbrevSource"^^xsd:string) Annotation( ) "B09-48") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:1791") AnnotationAssertion( "FMA:81151") AnnotationAssertion(Annotation( "BIRNLEX:1791") "UMLS:C1272514") AnnotationAssertion(Annotation( "BIRNLEX:1791") "B09-48") AnnotationAssertion(Annotation( ) "BA48") AnnotationAssertion(Annotation( "BIRNLEX:1791") "Brodmann (1909) area 48") AnnotationAssertion(Annotation( "FMA:81151") "Brodmann area 48") AnnotationAssertion(Annotation( "BIRNLEX:1791") "Brodmann area 48, retrosubicular") AnnotationAssertion(Annotation( "FMA:81151") "Brodmann's area 48") AnnotationAssertion(Annotation( "FMA:81151") "area 48 of Brodmann") AnnotationAssertion(Annotation( "BIRNLEX:1791") "area retrosubicularis") AnnotationAssertion(Annotation( "FMA:81151") "retrosubicular area 48") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006485") AnnotationAssertion(rdfs:label "Brodmann (1909) area 48") SubClassOf( ) # Class: (Brodmann (1909) area 52) AnnotationAssertion(Annotation( ) "Parainsular area 52 (H) is a subdivision of the cytoarchitecturally defined temporal region of cerebral cortex. It is located in the bank of the lateral sulcus on the dorsal surface of the temporal lobe. Its medial boundary corresponds approximately to the junction between the temporal lobe and the insula. Cytoarchitecturally it is bounded laterally by the anterior transverse temporal area 42 (H) (Brodmann-1909).") AnnotationAssertion(Annotation( "BIRNLEX:1792") Annotation( "NIFSTD:SumsDB_abbrevSource"^^xsd:string) Annotation( ) "B09-52") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:1792") AnnotationAssertion( "FMA:81153") AnnotationAssertion(Annotation( "BIRNLEX:1792") "UMLS:C1272514") AnnotationAssertion(Annotation( "BIRNLEX:1792") "B09-52") AnnotationAssertion(Annotation( ) "BA52") AnnotationAssertion(Annotation( "BIRNLEX:1792") "Brodmann (1909) area 52") AnnotationAssertion(Annotation( "FMA:81153") "Brodmann area 52") AnnotationAssertion(Annotation( "BIRNLEX:1792") "Brodmann area 52, parainsular") AnnotationAssertion(Annotation( "FMA:81153") "area 52 of Brodmann") AnnotationAssertion(Annotation( "BIRNLEX:1792") "area parainsularis") AnnotationAssertion(Annotation( "FMA:81153") "parainsular area 52") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006486") AnnotationAssertion(rdfs:label "Brodmann (1909) area 52") SubClassOf( ) # Class: (Hadjikhani et al. (1998) visuotopic area V2d) AnnotationAssertion(Annotation( "BIRNLEX:4055") Annotation( "NIFSTD:SumsDB_abbrevSource"^^xsd:string) Annotation( ) "V2d") AnnotationAssertion( "BIRNLEX:4055") AnnotationAssertion(Annotation( "BIRNLEX:4055") "Hadjikhani et al. (1998) visuotopic area v2d") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006487") AnnotationAssertion(rdfs:label "Hadjikhani et al. (1998) visuotopic area V2d") SubClassOf( ) # Class: (C3 segment of cervical spinal cord) AnnotationAssertion(Annotation( ) "The segment of the spinal cord that corresponds to the third cervical vertebra in most mammals.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:744") AnnotationAssertion( "FMA:71181") AnnotationAssertion(Annotation( "BIRNLEX:744") "UMLS:C0457853") AnnotationAssertion(Annotation( "FMA:71181") "C3 segment") AnnotationAssertion(Annotation( "BIRNLEX:744") "C3 spinal cord segment") AnnotationAssertion(Annotation( "BIRNLEX:744") "third cervical spinal cord segment") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006488") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "C3 segment of cervical spinal cord") SubClassOf( ) # Class: (C2 segment of cervical spinal cord) AnnotationAssertion(Annotation( ) "The segment of the spinal cord that corresponds to the second cervical vertebra in most mammals.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:752") AnnotationAssertion( "FMA:71180") AnnotationAssertion(Annotation( "BIRNLEX:752") "UMLS:C0457852") AnnotationAssertion(Annotation( "FMA:71180") "C2 segment") AnnotationAssertion(Annotation( "BIRNLEX:752") "C2 spinal cord segment") AnnotationAssertion(Annotation( "BIRNLEX:752") "second cervical spinal cord segment") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006489") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "C2 segment of cervical spinal cord") SubClassOf( ) # Class: (C4 segment of cervical spinal cord) AnnotationAssertion(Annotation( ) "The segment of the spinal cord that corresponds to the fourth cervical vertebra in most mammals.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:753") AnnotationAssertion( "FMA:71182") AnnotationAssertion(Annotation( "BIRNLEX:753") "UMLS:C0457854") AnnotationAssertion(Annotation( "FMA:71182") "C4 segment") AnnotationAssertion(Annotation( "BIRNLEX:753") "C4 spinal cord segment") AnnotationAssertion(Annotation( "BIRNLEX:753") "forth cervical spinal cord segment") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006490") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "C4 segment of cervical spinal cord") SubClassOf( ) # Class: (C5 segment of cervical spinal cord) AnnotationAssertion(Annotation( ) "The segment of the spinal cord that corresponds to the fifth cervical vertebra in most mammals.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:760") AnnotationAssertion( "FMA:71183") AnnotationAssertion(Annotation( "BIRNLEX:760") "UMLS:C0457855") AnnotationAssertion(Annotation( "FMA:71183") "C5 segment") AnnotationAssertion(Annotation( "BIRNLEX:760") "C5 spinal cord segment") AnnotationAssertion(Annotation( "BIRNLEX:760") "fifth cervical spinal cord segment") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006491") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "C5 segment of cervical spinal cord") SubClassOf( ) # Class: (C6 segment of cervical spinal cord) AnnotationAssertion(Annotation( ) "The segment of the spinal cord that corresponds to the sixth cervical vertebra in most mammals.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:766") AnnotationAssertion( "FMA:71184") AnnotationAssertion(Annotation( "BIRNLEX:766") "UMLS:C0457856") AnnotationAssertion(Annotation( "FMA:71184") "C6 segment") AnnotationAssertion(Annotation( "BIRNLEX:766") "C6 spinal cord segment") AnnotationAssertion(Annotation( "BIRNLEX:766") "sixth cervical spinal cord segment") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006492") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "C6 segment of cervical spinal cord") SubClassOf( ) # Class: (C7 segment of cervical spinal cord) AnnotationAssertion(Annotation( ) "The segment of the spinal cord that corresponds to the seventh cervical vertebra in most mammals.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:773") AnnotationAssertion( "FMA:71185") AnnotationAssertion(Annotation( "BIRNLEX:773") "UMLS:C0457857") AnnotationAssertion(Annotation( "FMA:71185") "C7 segment") AnnotationAssertion(Annotation( "BIRNLEX:773") "C7 spinal cord segment") AnnotationAssertion(Annotation( "BIRNLEX:773") "seventh cervical spinal cord segment") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006493") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "C7 segment of cervical spinal cord") SubClassOf( ) # Class: (apex of arytenoid) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37423") AnnotationAssertion( "FMA:55348") AnnotationAssertion( "MA:0001760") AnnotationAssertion(Annotation( "FMA:55348") "apex of arytenoid cartilage") AnnotationAssertion(Annotation( "FMA:55348") "arytenoid cartilage apex") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006494") AnnotationAssertion(rdfs:label "apex of arytenoid") SubClassOf(Annotation( "MA"^^xsd:string) ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "MA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (osseus cochlear canal) AnnotationAssertion( "EMAPA:35621") AnnotationAssertion( "FMA:75666") AnnotationAssertion( "MA:0001183") AnnotationAssertion(Annotation( "FMA:75666") "osseous cochlear canal") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006495") AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "Design pattern note: check if conforms to foramen pattern") AnnotationAssertion(rdfs:label "osseus cochlear canal") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "MA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (external acoustic meatus osseus part) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37526") AnnotationAssertion( "FMA:61290") AnnotationAssertion( "MA:0001235") AnnotationAssertion( "osseous external acoustic meatus") AnnotationAssertion(Annotation( "FMA:61290") "osseous external acoustic tube") AnnotationAssertion(Annotation( "FMA:61290") "osseous part of external acoustic meatus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:61290") "bony external acoustic meatus") AnnotationAssertion( "UBERON:0006496") AnnotationAssertion(rdfs:label "external acoustic meatus osseus part") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (interosseous muscle of pes) AnnotationAssertion(Annotation( ) "Any of the interosseous muscles of the pes (foot). Includes the plantar and dorsal interossei.") AnnotationAssertion(Annotation( "MURDOCH:920") "Interroseous muscles are short digital muscles found together on the plantar aspect of the hindlimb. They act as shock absorbers for the pes, and closely resemble the interossei found in the forelimb. They originate from the proximal ends of all metatarsal bones and initially insert on the sesamoid bones at the metatarsophalangeal joints. The interosseous are then continued by distal sesamoidean ligaments which join the extensor tendons and attach to the phalanges[MURDOCH:920].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:36262") AnnotationAssertion( "FMA:37456") AnnotationAssertion( "MA:0002302") AnnotationAssertion( "NCIT:C53172") AnnotationAssertion(Annotation( "ncithesaurus:Foot_Interosseous_Muscle") "UMLS:C0448494") AnnotationAssertion(Annotation( "FMA:37456") "foot interosseous") AnnotationAssertion(Annotation( "MA:0002302") "foot interosseus muscle") AnnotationAssertion(Annotation( "FMA:37456") "interosseous of foot") AnnotationAssertion( "pes interosseous muscle") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:37456") "interosseous muscle of foot") AnnotationAssertion( "UBERON:0006497") AnnotationAssertion(rdfs:label "interosseous muscle of pes") SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (dorsal pes interosseous muscle) AnnotationAssertion(Annotation( ) "The most superior muscles in the sole of the foot that abduct the second to fourth toes. These four muscles also act through the dorsal expansions to resist extension of the metatarsophalangeal joints and flexion of the interphalangeal joints.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37517") AnnotationAssertion( "FMA:37457") AnnotationAssertion( "MA:0002303") AnnotationAssertion( "NCIT:C52701") AnnotationAssertion(Annotation( "ncithesaurus:Dorsal_Foot_Interosseous_Muscle") "UMLS:C1744541") AnnotationAssertion(Annotation( "MA:0002303") Annotation( ) "dorsal foot interosseus muscle") AnnotationAssertion(Annotation( "FMA:37457") "dorsal interosseous of foot") AnnotationAssertion( "musculi interossei dorsalis pedis") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:37457") "dorsal interosseous muscle of foot") AnnotationAssertion(Annotation( ) Annotation( ) "musculi interossei dorsalis pedis") AnnotationAssertion( "UBERON:0006499") AnnotationAssertion(rdfs:comment "Action: abducts toes") AnnotationAssertion(rdfs:label "dorsal pes interosseous muscle") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/5/57/Gray446.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (plantar interosseous muscle of pes) AnnotationAssertion(Annotation( ) "Any of three muscles with origin from the third, fourth, and fifth metatarsal bones, with insertion to the proximal phalanx of the same toes, with nerve supply from the lateral plantar nerve, and whose action adducts the three lateral toes.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37518") AnnotationAssertion( "FMA:37458") AnnotationAssertion( "MA:0002304") AnnotationAssertion( "NCIT:C52702") AnnotationAssertion(Annotation( "ncithesaurus:Plantar_Foot_Interosseus_Muscle") "UMLS:C1744540") AnnotationAssertion( "musculi interossei plantares") AnnotationAssertion(Annotation( "MA:0002304") Annotation( ) "plantar foot interosseus muscle") AnnotationAssertion(Annotation( "FMA:37458") "plantar interosseous of foot") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "musculi interosseus plantaris") AnnotationAssertion(Annotation( "FMA:37458") "plantar interosseous muscle of foot") AnnotationAssertion( "UBERON:0006502") AnnotationAssertion(rdfs:label "plantar interosseous muscle of pes") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/2/21/Gray447.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (palmar interosseous muscle of manus) AnnotationAssertion(Annotation( ) "Any of three muscles, the first with its origin from the second metacarpal, and the second and the third with origin from the fourth and fifth metacarpals; the first with insertion into the index finger, and the second and the third with insertion into the ring and little fingers; with nerve supply from the ulnar nerve, and whose action adducts the fingers toward the axis of the middle finger.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37520") AnnotationAssertion( "FMA:37419") AnnotationAssertion( "MA:0002315") AnnotationAssertion( "NCIT:C52704") AnnotationAssertion(Annotation( "ncithesaurus:Palmar_Hand_Interosseus_Muscle") "UMLS:C1709453") AnnotationAssertion( "musculi interossei palmares") AnnotationAssertion(Annotation( "MA:0002315") Annotation( ) "palmar hand interosseus muscle") AnnotationAssertion(Annotation( "FMA:37419") "palmar interosseous of hand") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "musculi interossei palmares") AnnotationAssertion(Annotation( "FMA:37419") "palmar interosseous muscle of hand") AnnotationAssertion( "UBERON:0006505") AnnotationAssertion(rdfs:label "palmar interosseous muscle of manus") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/3/39/Gray429.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (interosseous muscle of autopod) AnnotationAssertion(Annotation( ) Annotation( ) "Any of the muscles of the autopod region that lie between metacarpal or metatarsal bones.") AnnotationAssertion( "interosseous") AnnotationAssertion( ) AnnotationAssertion( "interosseus muscle") AnnotationAssertion( "m. interosseous") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "interossei") AnnotationAssertion( "UBERON:0006508") AnnotationAssertion(rdfs:label "interosseous muscle of autopod") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "cjm"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (pallidum) AnnotationAssertion(Annotation( ) "Part of what are called the basal ganglia of the brain which consist of the globus pallidus and the ventral pallidum.") AnnotationAssertion( ) AnnotationAssertion( "BAMS:PAL") AnnotationAssertion( "EMAPA:32780") AnnotationAssertion( "FMA:83684") AnnotationAssertion( "MA:0000889") AnnotationAssertion( "MBA:803") AnnotationAssertion(Annotation( "FMA:83684") "neuraxis pallidum") AnnotationAssertion(Annotation( "FMA:83684") "pallidum of neuraxis") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006514") AnnotationAssertion(rdfs:label "pallidum") SubClassOf( ) SubClassOf(Annotation( "MA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (dorsal pallidum) AnnotationAssertion(Annotation( "NeuroNames:1604") "The predominant portion of the globus pallidus in the striatopallidal system, which is defined by connectivity and neurochemical staining. The dorsal pallidum is distinguished from the ventral pallidum by a boundary that is partially defined by the anterior commissure. The remainder of the boundary is indistinct in sections stained for Nissl substance ( Heimer-1995 ).") AnnotationAssertion( ) AnnotationAssertion( "BAMS:PALd") AnnotationAssertion( "BTO:0004376") AnnotationAssertion( "FMA:77619") AnnotationAssertion( "MBA:818") AnnotationAssertion(Annotation( ) "globus pallidus dorsal part") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0004376") "dorsal globus pallidus") AnnotationAssertion(Annotation( "BAMS:PALd") "pallidum dorsal region") AnnotationAssertion( "UBERON:0006516") AnnotationAssertion(rdfs:label "dorsal pallidum") SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf(Annotation( "BTO"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (kidney calyx) AnnotationAssertion(Annotation( "MESH:A05.810.453.537.503") "Recesses of the kidney pelvis which divides into two wide, cup-shaped major renal calices, with each major calix subdivided into 7 to 14 minor calices. Urine empties into a minor calix from collecting tubules, then passes through the major calix, renal pelvis, and ureter to enter the urinary bladder. (From Moore, Clinically Oriented Anatomy, 3d ed, p211).") AnnotationAssertion( "calyceal") AnnotationAssertion(Annotation( "EMAPA:18676") "calyx") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:18676") AnnotationAssertion( "FMA:284558") AnnotationAssertion( "GAID:427") AnnotationAssertion( "MA:0000369") AnnotationAssertion( "MESH:D007670") AnnotationAssertion( "NCIT:C12927") AnnotationAssertion(Annotation( "ncithesaurus:Renal_Calyx") "UMLS:C0022651") AnnotationAssertion(Annotation( ) "calices renales") AnnotationAssertion( "renal calix") AnnotationAssertion(Annotation( "MA:0000369") "renal calyx") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "calices renales") AnnotationAssertion( "UBERON:0006517") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "kidney calyx") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (right lung lobe) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A lobe of lung that is part of a right lung.") AnnotationAssertion(Annotation( "ISBN:0123813611"^^xsd:string) "4 in mice, divided into 3 in human by two interlobal fissures") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:35155") AnnotationAssertion( "MA:0001791") AnnotationAssertion( "NCIT:C48944") AnnotationAssertion(Annotation( "ncithesaurus:Lobe_of_the_Right_Lung") "UMLS:C1285106") AnnotationAssertion( "lobe of right lung") AnnotationAssertion(Annotation( "ncithesaurus:Lobe_of_the_Right_Lung") "lobe of the right lung") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006518") AnnotationAssertion(rdfs:label "right lung lobe") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (alveolar system) AnnotationAssertion(Annotation( "BTO:0000136") "System pertaining to a bronchus and alveoli.") AnnotationAssertion( "BTO:0000136") AnnotationAssertion( "CALOHA:TS-1296") AnnotationAssertion( "EMAPA:32692") AnnotationAssertion( "MA:0000416") AnnotationAssertion(Annotation( "MP:0010899") "pulmonary alveolar system") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0000136") "bronchoalveolar system") AnnotationAssertion( "UBERON:0006524") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "alveolar system") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (left lung alveolar system) AnnotationAssertion( "EMAPA:19001") AnnotationAssertion( "MA:0001775") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006525") AnnotationAssertion(rdfs:label "left lung alveolar system") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (right lung alveolar system) AnnotationAssertion( "EMAPA:35717") AnnotationAssertion( "MA:0001784") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006526") AnnotationAssertion(rdfs:label "right lung alveolar system") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (seminal fluid) AnnotationAssertion(Annotation( ) "A substance formed from the secretion of one or more glands of the male genital tract in which sperm cells are suspended.") AnnotationAssertion( "this ontology contains a number of subtypes of seminal fluid, defined according to glands (which are more taxonomically restricted)") AnnotationAssertion( "we follow FMA and make this class a generic superclass of the secretions of different glands (prostate, bulbo-urethreal, seminal vesicle). MA (and ncit) follows a mixture model, where these secretions are part of the seminal fluid") AnnotationAssertion(Annotation( ) "This term covers a variety of species. Example: In D. melanogaster, seminal fluid proteins affect female receptivity, ovulation, oogenesis, sperm storage, sperm competition and mating plug formation") AnnotationAssertion( "seminal fluid may have a role in sperm capacitation, sperm motility") AnnotationAssertion( "BTO:0001232") AnnotationAssertion( "CALOHA:TS-0918") AnnotationAssertion( "EMAPA:36543") AnnotationAssertion( "FMA:62967") AnnotationAssertion( "MA:0002523") AnnotationAssertion( "MAT:0000057") AnnotationAssertion( "MIAA:0000057") AnnotationAssertion(Annotation( "BTO:0001232") "seminal plasma") AnnotationAssertion( "uberon") AnnotationAssertion( "male genital fluid") AnnotationAssertion( "male genital secretion") AnnotationAssertion(Annotation( "BTO:0001232") "seminal fluid") AnnotationAssertion( "UBERON:0006530") AnnotationAssertion(rdfs:label "seminal fluid") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (oculomotor muscle) AnnotationAssertion(Annotation( "MESH:A02.633.567.700") "The muscles that move the eye. Included in this group are the medial rectus, lateral rectus, superior rectus, inferior rectus, inferior oblique, superior oblique, musculus orbitalis, and levator palpebrae superioris.") AnnotationAssertion(Annotation( "MA"^^xsd:string) "we follow MA in making this a subclass of extra-ocular muscle but the distinction is not clear") AnnotationAssertion( ) AnnotationAssertion( "CALOHA:TS-0305") AnnotationAssertion( "MA:0002432") AnnotationAssertion( "MESH:D009801") AnnotationAssertion( "NCIT:C33199") AnnotationAssertion(Annotation( "ncithesaurus:Oculomotor_Muscle") "UMLS:C0028863") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006531") AnnotationAssertion(rdfs:label "oculomotor muscle") SubClassOf(Annotation( "MA"^^xsd:string) ) # Class: (oblique extraocular muscle) AnnotationAssertion( "FMA:312383") AnnotationAssertion( "MA:0001275") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006532") AnnotationAssertion(rdfs:label "oblique extraocular muscle") SubClassOf( ) # Class: (rectus extraocular muscle) AnnotationAssertion( "FMA:312408") AnnotationAssertion( "MA:0001278") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006533") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "rectus extraocular muscle") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (renal convoluted tubule) AnnotationAssertion(Annotation( ) "Any region of a nephron tubule that is convoluted. Examples: distal convoluted tubule, proximal convoluted tuble.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:35725") AnnotationAssertion( "MA:0001665") AnnotationAssertion( "NCIT:C49479") AnnotationAssertion(Annotation( "ncithesaurus:Convoluted_Tubule") "UMLS:C1707510") AnnotationAssertion( "convoluted tubule") AnnotationAssertion(Annotation( "MA:0001665") "kidney convoluted tubule") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006534") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "renal convoluted tubule") SubClassOf( ) # Class: (skin secretion) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A portion of organism substance that secreted_by a zone of skin.") AnnotationAssertion( "MA:0002537") AnnotationAssertion(Annotation( "MA:0002537") "skin fluid/secretion") AnnotationAssertion( "uberon") AnnotationAssertion( "skin fluid") AnnotationAssertion( "skin substance") AnnotationAssertion( "UBERON:0006535") AnnotationAssertion(rdfs:label "skin secretion") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (male reproductive gland secretion) AnnotationAssertion(Annotation( "UBERON:cjm"^^xsd:string) "A portion of organism substance that is secreted by a male reproductive gland.") AnnotationAssertion( "EMAPA:36541") AnnotationAssertion( "MA:0002521") AnnotationAssertion(Annotation( "MA:0002521") "male reproductive system fluid/secretion") AnnotationAssertion( "uberon") AnnotationAssertion( "male reproductive system fluid") AnnotationAssertion( "male reproductive system secretion") AnnotationAssertion( "UBERON:0006536") AnnotationAssertion(rdfs:label "male reproductive gland secretion") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (female reproductive gland secretion) AnnotationAssertion(Annotation( "UBERON:cjm"^^xsd:string) "A portion of organism substance that is secreted by a female reproductive gland.") AnnotationAssertion( "MA:0002510") AnnotationAssertion(Annotation( "MA:0002510") "female reproductive system fluid/secretion") AnnotationAssertion( "uberon") AnnotationAssertion( "female reproductive system fluid") AnnotationAssertion( "female reproductive system secretion") AnnotationAssertion( "UBERON:0006537") AnnotationAssertion(rdfs:label "female reproductive gland secretion") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (respiratory system fluid/secretion) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A portion of organism substance that secreted_by a respiratory system.") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:36550") AnnotationAssertion( "MA:0002533") AnnotationAssertion( "NCIT:C13722") AnnotationAssertion(Annotation( "ncithesaurus:Respiratory_System_Fluid_or_Secretion") "UMLS:C1514899") AnnotationAssertion( "uberon") AnnotationAssertion( "respiratory system fluid") AnnotationAssertion( "respiratory system secretion") AnnotationAssertion( "UBERON:0006538") AnnotationAssertion(rdfs:label "respiratory system fluid/secretion") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (mammary gland fluid/secretion) AnnotationAssertion(Annotation( ) "A substance that is secreted by a mammary gland. The substance may differ depending on phase, with colostrum produced during pregancy/early lactation, and milk produced afterwards.") AnnotationAssertion( "EMAPA:36538") AnnotationAssertion( "MA:0002505") AnnotationAssertion( "uberon") AnnotationAssertion( "lactiferous gland fluid") AnnotationAssertion( "lactiferous gland secretion") AnnotationAssertion( "mammary gland fluid") AnnotationAssertion( "mammary gland secreted fluid") AnnotationAssertion( "mammary gland secretion") AnnotationAssertion( "secretion of mammary gland") AnnotationAssertion( "UBERON:0006539") AnnotationAssertion(rdfs:label "mammary gland fluid/secretion") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (outer medulla inner stripe loop of Henle) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A loop of Henle that is part of a kidney outer medulla inner stripe.") AnnotationAssertion( "EMAPA:29679") AnnotationAssertion( "MA:0002627") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006541") AnnotationAssertion(rdfs:label "outer medulla inner stripe loop of Henle") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (outer medulla outer stripe loop of Henle) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A loop of Henle that is part of a kidney outer medulla outer stripe.") AnnotationAssertion( "EMAPA:29665") AnnotationAssertion( "MA:0002630") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006542") AnnotationAssertion(rdfs:label "outer medulla outer stripe loop of Henle") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (kidney vasculature) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A vasculature that is part of a kidney.") AnnotationAssertion( "EMAPA:28457") AnnotationAssertion( "TAO:0005305") AnnotationAssertion( "ZFA:0005305") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006544") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "kidney vasculature") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (renal duct) AnnotationAssertion(Annotation( "ZFIN:ZDB-PUB-071029-9") "A tube in the kidney that collect and transport urine.") AnnotationAssertion(Annotation( "ZFA"^^xsd:string) "in ZFA this is defined as part of mesonephros") AnnotationAssertion( "TAO:0005289") AnnotationAssertion( "ZFA:0005289") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006553") AnnotationAssertion(rdfs:label "renal duct") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete urinary system structure) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006554") AnnotationAssertion(rdfs:comment "Obsoleted because this ontology discusses part-wise grouping classes") AnnotationAssertion(rdfs:label "obsolete urinary system structure") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (excretory tube) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A tube that is part of a excretory system.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006555") AnnotationAssertion(rdfs:label "excretory tube") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lymphatic part of lymphoid system) AnnotationAssertion(Annotation( ) "An organ system subdivision that is a network of vessels capable of removing accumulating protein and fluid from the interstitial space and returning it to the vascular space. In some species, this network is connected to the immune system via lymph nodes and lymphocyte-producing organs, with the whole being the lymphoid system.") AnnotationAssertion( "consider merging with lymph vasculature") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0010522") Annotation( "AAO"^^xsd:string) Annotation( "AAO:BJB"^^xsd:string) "Part of the circulatory system which consists of a series of vessels which collect blood (exclusive of erythrocytes) which seep through capillary walls and return it to the veins.[AAO]") AnnotationAssertion( "lymporeticular") AnnotationAssertion(Annotation( "FMA"^^xsd:string) "in FMA this is part of the cardiovascular system, but here we treat the CV system as a separate component of the circulatory system from the lymphatic system") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010522") AnnotationAssertion( "CALOHA:TS-2024") AnnotationAssertion( "EFO:0000870") AnnotationAssertion( "EMAPA:18248") AnnotationAssertion( "FMA:7162") AnnotationAssertion( "MA:0002961") AnnotationAssertion( "MESH:D008208") AnnotationAssertion( "VHOG:0001761") AnnotationAssertion(Annotation( "FMA:7162") Annotation( "MA:0002435") "lymphatic system") AnnotationAssertion(Annotation( "FMA:7162") "lymphatic tree system") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "VHOG:0001761") "lymporeticular system") AnnotationAssertion( "UBERON:0006558") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "lymphatic part of lymphoid system") SubClassOf( ) SubClassOf(Annotation( "AAO"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA"^^xsd:string) Annotation( "MA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (non-lymphatic part of lymphoid system) AnnotationAssertion(Annotation( ) "An organ system subdivision that is the part of the lymphoid system that excludes the lymphatic vessels..") AnnotationAssertion( "FMA:74623") AnnotationAssertion(Annotation( "FMA:74623") "non-lymphatic lymphoid system") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006561") AnnotationAssertion(rdfs:label "non-lymphatic part of lymphoid system") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pharynx) AnnotationAssertion(Annotation( "GO:0060465") "The pharynx is the part of the digestive system immediately posterior to the mouth[GO].") AnnotationAssertion( "currently this is an extremely generic class, encompassing both protostomes and deuterostomes.") AnnotationAssertion( "branchial") AnnotationAssertion( "pharyngeal") AnnotationAssertion( "FBbt:00005380") AnnotationAssertion( "MAT:0000049") AnnotationAssertion( "MIAA:0000049") AnnotationAssertion( "uberon") AnnotationAssertion( "anterior part of foregut") AnnotationAssertion( "pharyngeal tube") AnnotationAssertion( "UBERON:0006562") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "pharynx") SubClassOf( ) # Class: (tunica media of pulmonary trunk) AnnotationAssertion(Annotation( "FMA:85030") Annotation( "FMA:FMA"^^xsd:string) "Tunica media of artery which is continuous with the myocardium of right ventricle.[FMA].") AnnotationAssertion( "FMA:85030") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006563") AnnotationAssertion(rdfs:label "tunica media of pulmonary trunk") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (superficial palmar arch) AnnotationAssertion(Annotation( ) "The superficial palmar arch is formed predominantly by the ulnar artery, with a contribution from the superficial palmar branch of the radial artery. However, in some individuals the contribution from the radial artery might be absent, and instead anastomoses with either the princeps pollicis artery, the radialis indicis artery, or the median artery, the former two of which are branches from the radial artery. Alternative names for this arterial arch are: superficial volar arch, superficial ulnar arch, arcus palmaris superficialis, or arcus volaris superficialis. The arch passes across the palm in a curve with its convexity downward. If one were to fully extend the thumb, the superficial palmar arch would lie approximately at the level of a line drawn from the distal border of the thumb across the palm. The superficial palmar arch is more distal than the deep palmar arch. Three common palmar digital arteries arise from the arch, proceeding down on the second, third, and fourth lumbrical muscles, respectively. They each receive a contribution from a palmar metacarpal artery. Near the level of the metacarpophalangeal joints, each common palmar digital artery divides into two proper palmar digital arteries.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37755") AnnotationAssertion( "FMA:22834") AnnotationAssertion( "MA:0002127") AnnotationAssertion( "NCIT:C33665") AnnotationAssertion(Annotation( "ncithesaurus:Superficial_Palmar_Arch") "UMLS:C0226433") AnnotationAssertion(Annotation( "FMA:22834") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "arcus palmaris superficialis") AnnotationAssertion(Annotation( "FMA:22834") "superficial palmar arch") AnnotationAssertion(Annotation( "FMA:22834") "superficial palmar arterial arch") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006564") AnnotationAssertion(rdfs:label "superficial palmar arch") SubClassOf(Annotation( "MA"^^xsd:string) ) # Class: (female urethral meatus) AnnotationAssertion(Annotation( ) Annotation( "OBOL:automatic"^^xsd:string) "A urethral meatus that is part of a female urethra[Automatically generated definition].") AnnotationAssertion(Annotation( ) "The external urethral orifice (urinary meatus) is the external opening of the urethra, from which urine is ejected during urination. It is placed about 2.5 cm behind the glans clitoridis and immediately in front of that of the vagina; it usually assumes the form of a short, sagittal cleft with slightly raised margins. To its left and right are the openings of the Skene's ducts.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:36453") AnnotationAssertion( "FMA:85266") AnnotationAssertion( "MA:0002639") AnnotationAssertion(Annotation( "FMA:85266") "external orifice of female urethra") AnnotationAssertion(Annotation( "FMA:85266") "external urethral orifice (female)") AnnotationAssertion(Annotation( "FMA:85266") "female urethral meatus") AnnotationAssertion(Annotation( "FMA:85266") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "ostium urethrae externum (urethra feminina)") AnnotationAssertion(Annotation( "EMAPA:36453") "urethral meatus of clitoral urethra") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "EMAPA:36453") "distal urethral opening of female") AnnotationAssertion(Annotation( "EMAPA:36453") "urethral opening of clitoral urethra") AnnotationAssertion( "UBERON:0006565") AnnotationAssertion(rdfs:label "female urethral meatus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (left ventricle myocardium) AnnotationAssertion(Annotation( ) "A myocardium that is part of a left ventricle of a heart.") AnnotationAssertion(Annotation( "FMA:9558") "Myocardium of ventricle which is continuous with the tunica media of aorta.") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:17339") AnnotationAssertion( "FMA:9558") AnnotationAssertion( "MA:0002983") AnnotationAssertion(Annotation( "FMA:9558") "left ventricular myocardium") AnnotationAssertion(Annotation( "FMA:9558") "myocardium of left ventricle") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006566") AnnotationAssertion(rdfs:label "left ventricle myocardium") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (right ventricle myocardium) AnnotationAssertion(Annotation( ) "A myocardium that is part of a right ventricle of a heart.") AnnotationAssertion(Annotation( "FMA:9535") "Myocardium of ventricle which is continuous with the tunica media of the pulmonary trunk.") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:17342") AnnotationAssertion( "FMA:9535") AnnotationAssertion( "MA:0002984") AnnotationAssertion(Annotation( "FMA:9535") "myocardium of right ventricle") AnnotationAssertion(Annotation( "FMA:9535") "right ventricular myocardium") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006567") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "right ventricle myocardium") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (hypothalamic nucleus) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A nucleus of brain that is part of a hypothalamus.") AnnotationAssertion( ) AnnotationAssertion( "BTO:0002449") AnnotationAssertion( "EMAPA:35417") AnnotationAssertion( "FMA:258762") AnnotationAssertion( "MA:0002426") AnnotationAssertion(Annotation( "FMA:258762") "nucleus of hypothalamus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006568") AnnotationAssertion(rdfs:label "hypothalamic nucleus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (diencephalic nucleus) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A nucleus of brain that is part of a diencephalon.") AnnotationAssertion( "TAO:0002191") AnnotationAssertion( "ZFA:0001659") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006569") AnnotationAssertion(rdfs:label "diencephalic nucleus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (trabecula carnea of right ventricle) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A trabecula carnea that is part of a heart right ventricle.") AnnotationAssertion( ) AnnotationAssertion( "FMA:7270") AnnotationAssertion(Annotation( "FMA:7270") "trabeculae carneae (ventriculus dexter)") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006570") AnnotationAssertion(rdfs:label "trabecula carnea of right ventricle") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (trabecula carnea of left ventricle) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A trabecula carnea that is part of a heart left ventricle.") AnnotationAssertion( ) AnnotationAssertion( "FMA:7271") AnnotationAssertion(Annotation( "FMA:7271") "trabeculae carneae (ventriculus sinister)") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006571") AnnotationAssertion(rdfs:label "trabecula carnea of left ventricle") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pectinate line) AnnotationAssertion(Annotation( ) "The pectinate line (anocutaneous line, dentate line, anorectal junction) is a line which divides the upper 2/3rds and lower 1/3rd of the anal canal. Developmentally, this line represents the hindgut-proctodeum junction. It is an important anatomical landmark, and several distinctions can be made based upon the location of a structure relative to this line:.") AnnotationAssertion(Annotation( "FMA"^^xsd:string) "FMA also has FMA:29321 but it's not clear how this differs") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:19159") AnnotationAssertion( "FMA:75383") AnnotationAssertion( "NCIT:C34245") AnnotationAssertion(Annotation( "ncithesaurus:Pectinate_Line") "UMLS:C0821671") AnnotationAssertion(Annotation( "FMA:75383") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "linea pectinata canalis analis") AnnotationAssertion(Annotation( "FMA:75383") "pectinate line of anal canal") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "EMAPA:19159") "Hilton's 'white line'") AnnotationAssertion(Annotation( ) "dentate line") AnnotationAssertion(Annotation( ) Annotation( ) "linea anocutanea") AnnotationAssertion(Annotation( ) "recto-anal junction") AnnotationAssertion(Annotation( "EMAPA:19159") "site of anal membrane") AnnotationAssertion( "UBERON:0006574") AnnotationAssertion(rdfs:label "pectinate line") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/7/7b/Hemorrhoid.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (vestibular organ) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An organ that is part of a vestibular system.") AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:2519") AnnotationAssertion(Annotation( "BIRNLEX:2519") "UMLS:C0682674") AnnotationAssertion(Annotation( ) "balance organ") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006585") AnnotationAssertion(rdfs:label "vestibular organ") SubClassOf( ) SubClassOf(Annotation( "NIFSTD"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (otolymph) AnnotationAssertion(Annotation( ) "Transudate located within the osseus labyrinth. Otolymph can be further classified with respect to whether it is within the membranous labyrinth (endolymph) or outside the mebranous labyrinth (perilymph).") AnnotationAssertion(Annotation( "MESH:A12.207.571") "Fluids found within the osseous labyrinth (PERILYMPH) and the membranous labyrinth (ENDOLYMPH) of the inner ear. (From Gray's Anatomy, 30th American ed, p1328, 1332[MESH:A12.207.571])") AnnotationAssertion( "UBERON:0007793") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:36547") AnnotationAssertion( "GAID:1183") AnnotationAssertion( "MA:0002527") AnnotationAssertion( "MESH:A12.207.571") AnnotationAssertion( "NCIT:C33231") AnnotationAssertion(Annotation( "ncithesaurus:Otolymph") "UMLS:C1518679") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "MESH:A12.207.571") "labyrinthine fluid") AnnotationAssertion( "UBERON:0006586") AnnotationAssertion(rdfs:label "otolymph") SubClassOf(Annotation( "FMA-abduced") ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (ligamentum venosum) AnnotationAssertion(Annotation( ) "The ligamentum venosum is the fibrous remnant of the ductus venosus of the fetal circulation. Usually, it is attached to the left branch of the portal vein within the porta hepatis (gateway to the liver). It may be continuous with the round ligament of liver (ligamentum teres hepatis). It is invested by the peritoneal folds of the lesser omentum within a fissure on the inferior surface of the liver between the caudate and main parts of the left lobe.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:14080") AnnotationAssertion(Annotation( "FMA:14080") "ligament of arantius") AnnotationAssertion(Annotation( "FMA:14080") "ligamentum venosum (ductus venosus)") AnnotationAssertion(Annotation( "FMA:14080") "ligamentum venosum of liver") AnnotationAssertion(Annotation( ) "ligamentum venosus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006587") AnnotationAssertion(rdfs:label "ligamentum venosum") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/a/a3/Gray1087-liver.png"^^xsd:anyURI) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (round ligament of liver) AnnotationAssertion(Annotation( ) "A degenerative string of tissue that exists in the free edge of the falciform ligament of the liver. Anatomically, the round ligament divides the left part of the liver into medial and lateral sections. The round ligament represents the remnant of the fetal left umbilical vein. The round ligament therefore only exists in mammals. Prenatally and for a month or two after birth, the left umbilical vein is patent, subsequently degenerating to fibrous tissue, the round ligament. The umbilical vein/round ligament inserts around the umbilicus and is an important landmark of the inner surface of the anterior abdominal wall[WP].") AnnotationAssertion(Annotation( ) "ligamentum teres") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:14079") AnnotationAssertion( "NCIT:C34008") AnnotationAssertion(Annotation( "ncithesaurus:Round_Ligament_of_the_Liver") "UMLS:C0230247") AnnotationAssertion(Annotation( "FMA:14079") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "ligamentum teres hepatis") AnnotationAssertion(Annotation( ) "ligamentum teres hepatitis") AnnotationAssertion(Annotation( "FMA:14079") "ligamentum teres of liver") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006588") AnnotationAssertion(rdfs:label "round ligament of liver") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses( ) # Class: (round ligament of uterus) AnnotationAssertion(Annotation( ) Annotation( "MESH:A02.513.803") "The round ligament of the uterus originates at the uterine horns, in the parametrium. It leaves the pelvis via the deep inguinal ring, passes through the inguinal canal and continues on to the labia majora where its fibers spread and mix with the tissue of the mons pubis[WP]. A fibromuscular band that attaches to the uterus and then passes along the broad ligament, out through the inguinal ring, and into the labium majus[MESH].") AnnotationAssertion(Annotation( "GAID:130") "round ligament") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:20420") AnnotationAssertion( "GAID:130") AnnotationAssertion( "NCIT:C34009") AnnotationAssertion(Annotation( "ncithesaurus:Round_Ligament_of_the_Uterus") "UMLS:C0035877") AnnotationAssertion(Annotation( "FMA:20420") "Hunter's ligament") AnnotationAssertion( "ligamentum teres of uterus") AnnotationAssertion(Annotation( ) "ligamentum teres uteri") AnnotationAssertion(Annotation( ) "round ligament of the uterus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "ligamentum teres uteri") AnnotationAssertion( "UBERON:0006589") AnnotationAssertion(rdfs:label "round ligament of uterus") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/7/76/Gray1138.png"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf(Annotation( "lower gubernaculum") Annotation( "Wikipedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (remnant of embryonic structure) AnnotationAssertion(Annotation( ) Annotation( "FMA:16558") "A vestigial structure that is a remnant of an embryonic structure that remains in the adult organism.") AnnotationAssertion(Annotation( "FMA:16558, FMA:FMA") "Anatomical structure which is a remnant of an embryonic structure in the postnatal period. Examples: median umbilical ligament, paroohoron, prostatic utricle, ligamentum arteriosum.[FMA]") AnnotationAssertion( "FMA:16558") AnnotationAssertion(Annotation( "FMA:16558") "vestigial embryonic structure") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006590") AnnotationAssertion(rdfs:label "remnant of embryonic structure") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (transformed artery) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A remnant of embryonic structure that develops_from a artery.") AnnotationAssertion( "FMA:14076") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006591") AnnotationAssertion(rdfs:label "transformed artery") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (transformed vein) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A remnant of embryonic structure that develops_from a vein.") AnnotationAssertion( "FMA:14078") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006592") AnnotationAssertion(rdfs:label "transformed vein") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (gubernacular cord) AnnotationAssertion(Annotation( ) Annotation( "ISBN:0123971756") "The cranial, thin portion of the gubernaculum.") AnnotationAssertion( ) AnnotationAssertion( "BTO:0002814") AnnotationAssertion(Annotation( "BTO:0002814") "chorda gubernaculum") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "genitoinguinal ligament") AnnotationAssertion( "gubernacular cord") AnnotationAssertion(Annotation( ) Annotation( ) "ligamentum genitoinguinale") AnnotationAssertion(Annotation( ) "plica gubernaculi") AnnotationAssertion( "plica gubernaculum") AnnotationAssertion(Annotation( ) "plica gubernatrix") AnnotationAssertion(Annotation( ) "plicae gubernaculi") AnnotationAssertion(Annotation( ) "plicae gubernaculum") AnnotationAssertion(Annotation( ) Annotation( ) "plicae gubernatrix") AnnotationAssertion( "UBERON:0006594") AnnotationAssertion(rdfs:comment "Attaches to mesonephric-gonadal complex[DOI:10.1046/j.1469-7580.2002.00087.x]") AnnotationAssertion(rdfs:label "gubernacular cord") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (presumptive endoderm) AnnotationAssertion(Annotation( ) "Presumptive structure of the blastula that will develop into endoderm.") AnnotationAssertion( "AAO:0000471") AnnotationAssertion( "EFO:0003437") AnnotationAssertion( "TAO:0000416") AnnotationAssertion( "ZFA:0000416") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006595") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "presumptive endoderm") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (presumptive blood) AnnotationAssertion( "AAO:0000468") AnnotationAssertion( "EFO:0003439") AnnotationAssertion( "TAO:0000568") AnnotationAssertion( "ZFA:0000568") AnnotationAssertion( "future blood") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006596") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "presumptive blood") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (presumptive structure) AnnotationAssertion(Annotation( "GOC:CVS") Annotation( "GOC:YMB") Annotation( "ZFA:0001116") "Portion of embryonic tissue determined by fate mapping to become a structure.") AnnotationAssertion( "Consider merging with anlage") AnnotationAssertion( "AAO:0000479") AnnotationAssertion( "TAO:0001116") AnnotationAssertion( "ZFA:0001116") AnnotationAssertion( "future structure") AnnotationAssertion(Annotation( "ZFA:0001116") "presumptive structures") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006598") AnnotationAssertion(rdfs:label "presumptive structure") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (presumptive hypochord) AnnotationAssertion(Annotation( ) Annotation( "ZFA:0001217") "Tissue is fated to develop into the hypochord.") AnnotationAssertion(Annotation( "ZFA:0001217, ZFA:curator") "Tissue along the lateral edges of the shield that is fated to develop into the hypochord[ZFA:curator].") AnnotationAssertion( "Unlike in frogs and axolotl, the hypochord does not appear to be endodermally derived[ZFA]") AnnotationAssertion( "AAO:0000474") AnnotationAssertion( "AAO:0010625") AnnotationAssertion( "EFO:0003453") AnnotationAssertion( "TAO:0001217") AnnotationAssertion( "ZFA:0001217") AnnotationAssertion( "future hypochord") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006599") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "presumptive hypochord") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (presumptive enteric nervous system) AnnotationAssertion( "AAO:0000472") AnnotationAssertion( "EFO:0003462") AnnotationAssertion( "TAO:0001334") AnnotationAssertion( "ZFA:0001334") AnnotationAssertion( "future enteric nervous system") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006600") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "presumptive enteric nervous system") SubClassOf( ) SubClassOf(Annotation( "NCBIBook:NBK10065") ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (presumptive ectoderm) AnnotationAssertion(Annotation( ) "Presumptive structure of the blastula that will develop into ectoderm.") AnnotationAssertion( "AAO:0000470") AnnotationAssertion( "EFO:0003466") AnnotationAssertion( "TAO:0001376") AnnotationAssertion( "XAO:0004132") AnnotationAssertion( "ZFA:0001376") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "ZFA:0001376") "presumptive epidermis") AnnotationAssertion( "UBERON:0006601") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "presumptive ectoderm") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (presumptive mesoderm) AnnotationAssertion(Annotation( ) "Presumptive structure of the blastula that will develop into mesoderm.") AnnotationAssertion( "AAO:0000476") AnnotationAssertion( "EFO:0003467") AnnotationAssertion( "TAO:0001377") AnnotationAssertion( "ZFA:0001377") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006603") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "presumptive mesoderm") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lamina orbitonasalis) AnnotationAssertion(Annotation( "ZFA:0001503") "Cranial cartilage which is bilaterally paired and develops as a dorsal plate-like projection of the anterolateral ethmoid plate, which are oriented perpendicular to the ethmoid plate. It fuses dorsally to the taenia marginalis anterior, and it joins the ethmoid cartilage medially.") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0000262") Annotation( "AAO"^^xsd:string) Annotation( "AAO:LAP"^^xsd:string) "In the larva, structure that is fused to the wall of the braincase, lateral to the olfactory foramen, and separates the nasal capsule and orbit. In the adult frog it constitutes the ventral part of postnasal wall.[AAO]") AnnotationAssertion( "AAO:0000262") AnnotationAssertion( "TAO:0001503") AnnotationAssertion( "ZFA:0001503") AnnotationAssertion(Annotation( "ZFA:0001503") "laminas orbitonasalis") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006604") AnnotationAssertion(rdfs:label "lamina orbitonasalis") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (tectum synoticum) AnnotationAssertion(Annotation( "ZFA:0001506") "Unpaired thin dorsal sheet of cartilage that partially covers the posterior chondrocranium.") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0010129") Annotation( "AAO"^^xsd:string) Annotation( "AAO:EJS"^^xsd:string) "Roof between frontoparietal foramen and otic capsules, confluent with taenia tecti marginales.[AAO]") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0010129") Annotation( "AAO"^^xsd:string) "relationship loss: part_of braincase and otic capsule skeleton (AAO:0000052)[AAO]") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0010129") Annotation( "AAO"^^xsd:string) "relationship loss: part_of otic and occipital (AAO:0000993)[AAO]") AnnotationAssertion(Annotation( "PMC1259625") "posterior tectum synoticum in humans - a skull roof element of the chondrocranium - temporarily exists in the territory of the interparietal during fetal life, and may be resposible for the sutura mendosa") AnnotationAssertion(Annotation( "AAO"^^xsd:string) "In AAO the def is 'Roof between frontoparietal foramen and otic capsules, confluent with taenia tecti marginales.', In TAO/ZFA this gives rise to supraoccipital and sphenotic.") AnnotationAssertion( "AAO:0010129") AnnotationAssertion( "TAO:0001506") AnnotationAssertion( "ZFA:0001506") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006605") AnnotationAssertion(rdfs:label "tectum synoticum") SubClassOf(Annotation( "ZFA"^^xsd:string) ) SubClassOf( ) SubClassOf(Annotation( "ZFA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (mandibular symphysis) AnnotationAssertion(Annotation( ) Annotation( "TAO:wd"^^xsd:string) Annotation( "ZFA:0005488") "A cartilaginous joint that connects left and right mandibles/dentary bones. Mandibular symphysis is unpaired[TAO,modified].") AnnotationAssertion( "this is placed as part of lower jaw region, as in this ontology the skeleton does not include joints") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0001851") Annotation( "TAO"^^xsd:string) Annotation( "TAO:wd"^^xsd:string) "Joint that articulates the left and right dentary bones. Mandibular symphysis is unpaired.[TAO]") AnnotationAssertion(Annotation( "ISBN:0073040584"^^xsd:string) "in snakes, the mandibular symphysis is composed of soft tissues, allowing independent movement of each mandible") AnnotationAssertion( ) AnnotationAssertion( "AAO:0000277") AnnotationAssertion( "FMA:75779") AnnotationAssertion( "MA:0001490") AnnotationAssertion( "TAO:0001851") AnnotationAssertion( "ZFA:0005488") AnnotationAssertion(Annotation( "TAO:0001851") "dentary symphysis") AnnotationAssertion(Annotation( "TAO:0001851") "inter-dentary joint") AnnotationAssertion(Annotation( "TAO:0001851") "inter-mandibular joint") AnnotationAssertion(Annotation( "MA:0001490") "symphysis menti") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "mental symphysis") AnnotationAssertion(Annotation( ) Annotation( ) "symphysis mandibulae") AnnotationAssertion( "UBERON:0006606") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "mandibular symphysis") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/6/64/Gray176.png"^^xsd:anyURI) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "connects adjacent mandibles") ObjectSomeValuesFrom( )) # Class: (medial umbilical ligament) AnnotationAssertion(Annotation( ) "The medial umbilical ligament is a paired structure found in human anatomy. It is on the deep surface of the anterior abdominal wall, and is covered by the medial umbilical folds.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:14077") AnnotationAssertion(Annotation( "FMA:14077") "ligamentum umbilicale mediale") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "chorda arteria umbilicalis") AnnotationAssertion(Annotation( ) "cord of umbilical artery") AnnotationAssertion(Annotation( ) Annotation( ) "ligamentum umbilicale mediale") AnnotationAssertion(Annotation( ) "medial umbilical fold") AnnotationAssertion(Annotation( ) "medial umbilical ligaments") AnnotationAssertion( "UBERON:0006607") AnnotationAssertion(rdfs:label "medial umbilical ligament") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/1/1e/Gray1037.png"^^xsd:anyURI) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses( ) # Class: (corpus cavernosum clitoridis) AnnotationAssertion(Annotation( ) "The corpus cavernosum clitoridis is one of a pair of sponge-like regions of erectile tissue which contain most of the blood in the clitoris during clitoral erection. This is homologous to the corpus cavernosum penis in the male; the body of the clitoris contains erectile tissue in a pair of corpora cavernosa (literally 'cave-like bodies'), with a recognisably similar structure.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0002018") AnnotationAssertion( "FMA:20172") AnnotationAssertion(Annotation( "FMA:20172") "corpus cavernosum of clitoris") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0002018") "cavernous body of clitoris") AnnotationAssertion(Annotation( "BTO:0002018") "clitoral corpus cavernosum") AnnotationAssertion(Annotation( "BTO:0002018") "corpus cavernosum") AnnotationAssertion(Annotation( ) Annotation( ) "corpus cavernosum clitoridis") AnnotationAssertion( "UBERON:0006608") AnnotationAssertion(rdfs:label "corpus cavernosum clitoridis") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/8/8c/Clitoris_inner_anatomy.gif"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (corpus cavernosum) AnnotationAssertion( ) AnnotationAssertion( "BTO:0005454") AnnotationAssertion( "FMA:321004") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006609") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "corpus cavernosum") SubClassOf( ) # Class: (tunica albuginea) AnnotationAssertion(Annotation( ) "Denser fibrous covering over one of: penis, testicles or ovaries.") AnnotationAssertion( ) AnnotationAssertion( "FMA:19631") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "tunica albuginea corporis spongiosi") AnnotationAssertion(Annotation( ) Annotation( ) "tunica albuginea corporum cavernosorum") AnnotationAssertion( "UBERON:0006610") AnnotationAssertion(rdfs:label "tunica albuginea") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (exoskeleton) AnnotationAssertion(Annotation( ) "Exoskeleton or shell, including those of mollusks, turtles, insects and crustaceans.") AnnotationAssertion( "not to be confused with dermal skeleton") AnnotationAssertion( "exoskeletal") AnnotationAssertion( ) AnnotationAssertion( "BTO:0004659") AnnotationAssertion(Annotation( ) "lorica") AnnotationAssertion( "test") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0004659") "shell") AnnotationAssertion( "UBERON:0006611") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "exoskeleton") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (aponeurosis) AnnotationAssertion(Annotation( ) Annotation( "AEO:0000092") "A sheet of extracellular matrix.") AnnotationAssertion(Annotation( ) "Aponeuroses are layers of flat broad tendons. They have a shiny, whitish-silvery color, and are histologically similar to tendons, but are very sparingly supplied with blood vessels and nerves. When dissected, aponeuroses are papery, and peel off by sections. The primary regions with thick aponeurosis is in the ventral abdominal region, the dorsal lumbar region, and in the palmar region. Their primary function is to join muscles and the body parts the muscles act upon[Wikipedia:Aponeurosis].") AnnotationAssertion(Annotation( "ZFA"^^xsd:string) "in ZFA, aponeuroses are subtypes of tendons, but this is inconsistent with tendons being muscle-bone connections") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AEO:0000092") AnnotationAssertion( "EHDAA2:0003092") AnnotationAssertion( "FMA:9722") AnnotationAssertion( "NCIT:C32133") AnnotationAssertion(Annotation( "ncithesaurus:Aponeurosis") "UMLS:C0225205") AnnotationAssertion( "ZFA:0005652") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "aponeuroses") AnnotationAssertion(Annotation( ) "aponeurotic") AnnotationAssertion( "UBERON:0006614") AnnotationAssertion(rdfs:label "aponeurosis") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/e/e6/Aponeurosis.png"^^xsd:anyURI) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "AEO"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (venous sinus) AnnotationAssertion(Annotation( ) "A large vein or channel for the circulation of venous blood.") AnnotationAssertion( "check if it is valid to group ZFA class here.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "MA:0000070") AnnotationAssertion( "NCIT:C12877") AnnotationAssertion(Annotation( "ncithesaurus:Venous_Sinus") "UMLS:C0226504") AnnotationAssertion( "ZFA:0007072") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "ZFA:0007072") "blood sinus") AnnotationAssertion( "UBERON:0006615") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "venous sinus") SubClassOf( ) # Class: (right external ear) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An external ear that is in the right side of a multicellular organism.") AnnotationAssertion( "https://github.com/obophenotype/uberon/wiki/Modeling-paired-structures-Design-Pattern"^^xsd:anyURI) AnnotationAssertion(Annotation( "FMA:53643") "right auricular region") AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37361") AnnotationAssertion( "FMA:53643") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006616") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "right external ear") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (left external ear) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An external ear that is in the left side of a multicellular organism.") AnnotationAssertion( "https://github.com/obophenotype/uberon/wiki/Modeling-paired-structures-Design-Pattern"^^xsd:anyURI) AnnotationAssertion(Annotation( "FMA:53644") "left auricular region") AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37360") AnnotationAssertion( "FMA:53644") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006617") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "left external ear") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (atrium auricular region) AnnotationAssertion(Annotation( ) Annotation( "MP:0010489") "A small conical pouch projections located on the upper anterior portion of each atrium of the heart.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0002485") AnnotationAssertion( "EMAPA:36055") AnnotationAssertion( "FMA:77110") AnnotationAssertion( "MA:0002955") AnnotationAssertion( "atrial appendage") AnnotationAssertion(Annotation( "MP:0010489") "atrial auricle") AnnotationAssertion( "atrium appendage") AnnotationAssertion(Annotation( "FMA:77110") "auricle of atrium") AnnotationAssertion(Annotation( "FMA:77110") "auricle of heart") AnnotationAssertion(Annotation( "FMA:77110") "auricula (cor)") AnnotationAssertion(Annotation( "FMA:77110") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "auricula atrii") AnnotationAssertion( "auricular appendage") AnnotationAssertion(Annotation( "FMA:77110") "cardiac auricle") AnnotationAssertion( "heart atrial appendage") AnnotationAssertion(Annotation( "MP:0010489") "heart atrium auriclular region") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006618") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "atrium auricular region") SubClassOf(Annotation( "EHDAA2"^^xsd:string) ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (left atrium auricular region) AnnotationAssertion(Annotation( ) "A muscular pouch connected to the left atrium of the heart.") AnnotationAssertion(Annotation( "EMAPA:16816") "left auricular region") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0000276") AnnotationAssertion( "EHDAA:5343") AnnotationAssertion( "EMAPA:16816") AnnotationAssertion( "EMAPA:17316") AnnotationAssertion( "FMA:7219") AnnotationAssertion( "MA:0001869") AnnotationAssertion( "VHOG:0001229") AnnotationAssertion(Annotation( ) "auricula sinistra") AnnotationAssertion( "heart left atrial appendage") AnnotationAssertion(Annotation( "FMA:7219") "left auricle") AnnotationAssertion(Annotation( ) "left auricula") AnnotationAssertion(Annotation( ) "left auricular appendix") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "auricula sinistra") AnnotationAssertion(Annotation( "MA:0001869") "left atrial appendage") AnnotationAssertion( "left atrium appendage") AnnotationAssertion(Annotation( "FMA:7219") "left auricular appendage") AnnotationAssertion( "UBERON:0006630") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "left atrium auricular region") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/b/b7/Gray494.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (right atrium auricular region) AnnotationAssertion(Annotation( ) "A small conical muscular pouch attached to the right atrium of the heart.") AnnotationAssertion(Annotation( "EMAPA:16824") "right auricular region") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0000291") AnnotationAssertion( "EHDAA:5352") AnnotationAssertion( "EMAPA:16824") AnnotationAssertion( "EMAPA:17322") AnnotationAssertion( "FMA:7218") AnnotationAssertion( "MA:0001870") AnnotationAssertion( "VHOG:0001232") AnnotationAssertion(Annotation( ) "auricula dextra") AnnotationAssertion(Annotation( "FMA:7218") "right auricle") AnnotationAssertion(Annotation( ) "right auricula") AnnotationAssertion(Annotation( ) "right auriculur appendix") AnnotationAssertion( "uberon") AnnotationAssertion( "heart right atrial appendage") AnnotationAssertion(Annotation( "MA:0001870") "right atrial appendage") AnnotationAssertion( "right atrium appendage") AnnotationAssertion(Annotation( "FMA:7218") "right auricular appendage") AnnotationAssertion( "UBERON:0006631") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "right atrium auricular region") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (musculo-phrenic artery) AnnotationAssertion(Annotation( ) "An artery with its origin in the lateral terminal branch of the internal thoracic artery, with distribution to the diaphragm and the intercostal muscles, and with anastomoses to the branches of the pericardiacophrenic and inferior phrenic.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:19215") AnnotationAssertion( "FMA:10645") AnnotationAssertion(Annotation( "FMA:10645") "musculophrenic artery") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006632") AnnotationAssertion(rdfs:label "musculo-phrenic artery") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (coracoid process of scapula) AnnotationAssertion(Annotation( ) Annotation( "PHENOSCAPE:ad"^^xsd:string) "A process of the scapula in most mammals representing the remnant of the coracoid bone of lower vertebrates thas has become fused with the scapula.") AnnotationAssertion(Annotation( ) "The coracoid process is a small hook-like structure on the lateral edge of the superior anterior portion of the scapula. Pointing laterally forward, it, together with the acromion, serves to stabilize the shoulder joint. It is palpable in the deltopectoral groove between the deltoid and pectoralis major muscles. It is the site of attachment for several structures: * The pectoralis minor muscle - to 3rd to 5th ribs. * The short head of biceps brachii muscle - to Radial tuberosity. * The coracobrachialis muscle - to medial humerus. * The coracoclavicular ligament - to the clavicle. (The ligament is formed by the conoid ligament and trapezoid ligament.) * The coracoacromial ligament - to the acromion[WP][Wikipedia:Coracoid_process].") AnnotationAssertion( "In humans is situated on its superior border and serves for the attachment of various muscles") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:25121") AnnotationAssertion( "FMA:13455") AnnotationAssertion(Annotation( ) "coracoid process") AnnotationAssertion(Annotation( ) "coracoid process of the scapula") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "processus coracoideus") AnnotationAssertion( "UBERON:0006633") AnnotationAssertion(rdfs:label "coracoid process of scapula") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/a/a6/Gray205_left_scapula_lateral_view.png"^^xsd:anyURI) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf(Annotation( "EMAPA"^^xsd:string) Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (lingual vein) AnnotationAssertion(Annotation( ) "The lingual veins begin on the dorsum, sides, and under surface of the tongue, and, passing backward along the course of the lingual artery, end in the internal jugular vein. The vena comitans of the hypoglossal nerve (ranine vein), a branch of considerable size, begins below the tip of the tongue, and may join the lingual; generally, however, it passes backward on the Hyoglossus, and joins the common facial.") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0010514") Annotation( "AAO"^^xsd:string) Annotation( "AAO:BJB"^^xsd:string) "Vein which collects blood from the tongue and drains into the external jugular vein.[AAO]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010514") AnnotationAssertion( "EMAPA:19312") AnnotationAssertion( "FMA:14326") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "deep lingual veins") AnnotationAssertion(Annotation( ) "lingual vein") AnnotationAssertion(Annotation( ) "ranine") AnnotationAssertion(Annotation( ) "ranine vein") AnnotationAssertion(Annotation( ) Annotation( ) "vena lingualis") AnnotationAssertion( "UBERON:0006634") AnnotationAssertion(rdfs:label "lingual vein") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/7/7a/Gray559.png"^^xsd:anyURI) SubClassOf( ) # Class: (anterior abdominal wall) AnnotationAssertion(Annotation( ) "The abdominal wall represents the boundaries of the abdominal cavity. The abdominal wall is split into the posterior (back), lateral (sides) and anterior (front) walls. There is a common set of layers covering and forming all the walls: the deepest being the extraperitoneal fat, the parietal peritoneum, and a layer of fascia which has different names over where it covers (eg transversalis, psoas fascia). Superficial to these, but not present in the posterior wall are the three layers of muscle, the transversus abdominis (transverse abdominal muscle), the internal (obliquus internus) and the external oblique (obliquus externus).") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EHDAA:5976") AnnotationAssertion( "EMAPA:17744") AnnotationAssertion( "FMA:14627") AnnotationAssertion( "VHOG:0000764") AnnotationAssertion( "ventral abdominal wall") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006635") AnnotationAssertion(rdfs:label "anterior abdominal wall") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lumbar artery) AnnotationAssertion(Annotation( ) "The lumbar arteries are in series with the intercostals. They are usually four in number on either side, and arise from the back of the aorta, opposite the bodies of the upper four lumbar vertebrC&. A fifth pair, small in size, is occasionally present: they arise from the middle sacral artery. They run lateralward and backward on the bodies of the lumbar vertebrC&, behind the sympathetic trunk, to the intervals between the adjacent transverse processes, and are then continued into the abdominal wall. The arteries of the right side pass behind the inferior vena cava, and the upper two on each side run behind the corresponding crus of the diaphragm. The arteries of both sides pass beneath the tendinous arches which give origin to the Psoas major, and are then continued behind this muscle and the lumbar plexus. They now cross the Quadratus lumborum, the upper three arteries running behind, the last usually in front of the muscle. At the lateral border of the Quadratus lumborum they pierce the posterior aponeurosis of the Transversus abdominis and are carried forward between this muscle and the Obliquus internus. They anastomose with the lower intercostal, the subcostal, the iliolumbar, the deep iliac circumflex, and the inferior epigastric arteries.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:19096") AnnotationAssertion( "FMA:14735") AnnotationAssertion( "NCIT:C33013") AnnotationAssertion(Annotation( "ncithesaurus:Lumbar_Artery") "UMLS:C0226408") AnnotationAssertion(Annotation( "FMA:14735") "lumbar arterial tree") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "arteria lumbalis") AnnotationAssertion(Annotation( ) Annotation( ) "arteriae lumbales") AnnotationAssertion(Annotation( ) "lumbar artery") AnnotationAssertion( "UBERON:0006636") AnnotationAssertion(rdfs:label "lumbar artery") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/b/bd/Gray585.png"^^xsd:anyURI) SubClassOf( ) # Class: (celiac trunk) AnnotationAssertion( "EHDAA2:0004519") AnnotationAssertion( "EMAPA:19212") AnnotationAssertion( "FMA:14812") AnnotationAssertion( "galen:CeliacTrunk") AnnotationAssertion(Annotation( "FMA:14812") "Haller's tripus") AnnotationAssertion(Annotation( "EHDAA2:0004519") "coeliac trunk") AnnotationAssertion(Annotation( "FMA:14812") "coeliac trunk") AnnotationAssertion(Annotation( "FMA:14812") "coeliaco-mesenteric trunk") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "truncus coeliacus") AnnotationAssertion( "UBERON:0006637") AnnotationAssertion(rdfs:label "celiac trunk") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (remnant of urachus) AnnotationAssertion(Annotation( ) "The median umbilical ligament is a structure in human anatomy. It is a shrivelled piece of tissue that represents the remnant of the embryonic urachus. It extends from the apex of the bladder to the umbilicus, on the deep surface of the anterior abdominal wall. It is unpaired. It is covered by the median umbilical fold Lateral to this structure are the medial umbilical ligament (which is a different structure, not to be confused) and the lateral umbilical ligament.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:29637") AnnotationAssertion( "FMA:16568") AnnotationAssertion(Annotation( "FMA:16568") "median umbilical ligament") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "ligamentum umbilicale medianum") AnnotationAssertion(Annotation( ) "median umbilical fold") AnnotationAssertion(Annotation( ) "middle umbilical ligament") AnnotationAssertion( "UBERON:0006638") AnnotationAssertion(rdfs:label "remnant of urachus") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/e/ef/Gray1036.png"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (crus of penis) AnnotationAssertion(Annotation( ) "The continuation of each corpus cavernosum of the penis, diverging posteriorly to be attached to the pubic arch.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:19294") AnnotationAssertion( "FMA:18248") AnnotationAssertion( "MA:0003255") AnnotationAssertion(Annotation( "FMA:18248") "crus of penis") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "crura of penis") AnnotationAssertion(Annotation( ) Annotation( ) "crus penis") AnnotationAssertion( "UBERON:0006639") AnnotationAssertion(rdfs:label "crus of penis") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/e/ef/Gray1154.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (crus of clitoris) AnnotationAssertion(Annotation( ) "The continuation of the clitoris on each side of the corpus cavernosum, diverging from the body posteriorly and attached to the pubic arch.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:30821") AnnotationAssertion( "FMA:20175") AnnotationAssertion(Annotation( "FMA:20175") "clitoris crus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "clitoral crura") AnnotationAssertion(Annotation( ) "crura of clitoris") AnnotationAssertion(Annotation( ) "crus clitoridis") AnnotationAssertion(Annotation( ) "crus clitoris") AnnotationAssertion(Annotation( ) "crus of clitoris") AnnotationAssertion( "UBERON:0006640") AnnotationAssertion(rdfs:label "crus of clitoris") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/8/8c/Clitoris_inner_anatomy.gif"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (appendix epididymis) AnnotationAssertion(Annotation( ) "On the head of the epididymis is a small stalked appendage (sometimes duplicated). It is named the appendix of the epididymis (or pedunculated hydatid), and is usually regarded as a detached efferent duct. This structure is derived from the Wolffian duct as opposed to the appendix testis which is derived from the mullerian duct remnant.") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:19086") AnnotationAssertion( "FMA:18268") AnnotationAssertion( "MA:0003245") AnnotationAssertion(Annotation( "FMA:18268") "appendix of epididymis") AnnotationAssertion(Annotation( "FMA:18268") "epididymal appendix") AnnotationAssertion(Annotation( "FMA:18268") "epididymis appendix") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "appendix epididymidis") AnnotationAssertion(Annotation( ) "appendix epididymis") AnnotationAssertion(Annotation( ) "appendix of the epididymis") AnnotationAssertion( "UBERON:0006641") AnnotationAssertion(rdfs:label "appendix epididymis") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/4/4d/Gray1148.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (muscle layer of oviduct) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A muscle layer that is part of a fallopian tube.") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:29046") AnnotationAssertion( "FMA:18318") AnnotationAssertion(Annotation( "FMA:18318") "muscle layer of fallopian tube") AnnotationAssertion(Annotation( "FMA:18318") "muscle layer of oviduct") AnnotationAssertion(Annotation( "FMA:18318") "muscle layer of uterine tube") AnnotationAssertion(Annotation( "FMA:18318") "muscular coat of uterine tube") AnnotationAssertion(Annotation( "FMA:18318") "muscular layer of uterine tube") AnnotationAssertion(Annotation( "FMA:18318") "muscularis of uterine tube") AnnotationAssertion(Annotation( "FMA:18318") "tunica muscularis (Tuba uterina)") AnnotationAssertion(Annotation( "FMA:18318") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "tunica muscularis tubae uterinae") AnnotationAssertion(Annotation( "FMA:18318") "uterine tubal muscularis") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006642") AnnotationAssertion(rdfs:label "muscle layer of oviduct") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (tunica albuginea of testis) AnnotationAssertion(Annotation( "MP:0013738") "The dense fibrous connective tissue layer that covers the testis.") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000801") Annotation( "VHOG"^^xsd:string) Annotation( ) "The layer of connective tissue covering the testicles. [Wikipedia_(15/09/09)][VHOG]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000801") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "DOI:10.1387/ijdb.072470fc The spatio-temporal pattern of testis organogenesis in mammals - insights from the mole. The International Journal of Developmental Biology (2009)") "The tunica albuginea testis is the major component of the capsule of mammalian testes. (...) Our results from studying the mole provide evidence that the spatio-temporal pattern of testis development is not perfectly conserved in mammals, since we found differences with respect to the mouse testis organogenesis. This fact is even more significant when we consider that, apart from the mouse, the mole is probably the one of the best-known mammalian species in terms of the genetic control of testis development, implying that more peculiarities would be found if more species were investigated.[uncertain][VHOG]") AnnotationAssertion(Annotation( "EHDAA2:0002096") Annotation( "VHOG:0000801") Annotation( "ncithesaurus:Tunica_Albuginea") "tunica albuginea") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0002096") AnnotationAssertion( "EHDAA:9388") AnnotationAssertion( "EMAPA:19289") AnnotationAssertion( "FMA:19843") AnnotationAssertion( "MA:0003254") AnnotationAssertion( "NCIT:C33819") AnnotationAssertion(Annotation( "ncithesaurus:Tunica_Albuginea") "UMLS:C0227999") AnnotationAssertion( "VHOG:0000801") AnnotationAssertion(Annotation( "MP:0013738") "testis tunica albuginea") AnnotationAssertion(Annotation( "FMA:19843") "tunica albuginea (testis)") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "tunica albuginea (testicles)") AnnotationAssertion(Annotation( ) Annotation( ) "tunica albuginea testis") AnnotationAssertion( "UBERON:0006643") AnnotationAssertion(rdfs:label "tunica albuginea of testis") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (tunica albuginea of ovary) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:30522") AnnotationAssertion( "FMA:18630") AnnotationAssertion( "overay tunica albuginea") AnnotationAssertion(Annotation( "FMA:18630") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "tunica albuginea ovarii") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006644") AnnotationAssertion(rdfs:label "tunica albuginea of ovary") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (adventitia of epididymis) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An adventitia that is part of a epididymis.") AnnotationAssertion( "EMAPA:30443") AnnotationAssertion( "FMA:19136") AnnotationAssertion(Annotation( "FMA:19136") "epididymis adventitia") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006645") AnnotationAssertion(rdfs:label "adventitia of epididymis") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (muscle layer of epididymis) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A muscle layer that is part of a epididymis.") AnnotationAssertion( "EMAPA:30747") AnnotationAssertion( "FMA:19149") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006646") AnnotationAssertion(rdfs:label "muscle layer of epididymis") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (adventitia of ductus deferens) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An adventitia that is part of a vas deferens.") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:29767") AnnotationAssertion( "FMA:19238") AnnotationAssertion(Annotation( "FMA:19238") "adventitia of deferent duct") AnnotationAssertion(Annotation( "FMA:19238") "adventitia of ductus deferens") AnnotationAssertion(Annotation( "FMA:19238") "adventitia of vas deferens") AnnotationAssertion(Annotation( "FMA:19238") "deferent ductal adventitia") AnnotationAssertion(Annotation( "FMA:19238") "tunica adventitia (ductus deferens)") AnnotationAssertion(Annotation( "FMA:19238") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "tunica adventitia ductus deferentis") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006647") AnnotationAssertion(rdfs:label "adventitia of ductus deferens") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (adventitia of seminal vesicle) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An adventitia that is part of a seminal vesicle.") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:29775") AnnotationAssertion( "FMA:19403") AnnotationAssertion(Annotation( "FMA:19403") "adventitia of seminal gland") AnnotationAssertion(Annotation( "FMA:19403") "seminal vesicle adventitia") AnnotationAssertion(Annotation( "FMA:19403") "tunica adventitia (vesicula seminalis)") AnnotationAssertion(Annotation( "FMA:19403") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "tunica adventitia glandulae vesiculosae") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006648") AnnotationAssertion(rdfs:label "adventitia of seminal vesicle") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (suspensory ligament of ovary) AnnotationAssertion(Annotation( ) "A fold of peritoneum that extends out from the ovary to the wall of the pelvis.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:19085") AnnotationAssertion( "FMA:19822") AnnotationAssertion( "MA:0003244") AnnotationAssertion(Annotation( "FMA:19822") "infundibulopelvic fold") AnnotationAssertion(Annotation( "FMA:19822") "infundibulopelvic ligament") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006649") AnnotationAssertion(rdfs:comment "Some sources consider it a part of the broad ligament of uterus[2] while other sources just consider it a \"termination\" of the ligament.[3]") AnnotationAssertion(rdfs:label "suspensory ligament of ovary") SubClassOf( ) SubClassOf(Annotation( "Obol") ) SubClassOf(Annotation( "FMA-modified") ObjectSomeValuesFrom( )) SubClassOf(Annotation( "Wikipedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "Wikipedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses( ) # Class: (tunica vaginalis testis) AnnotationAssertion(Annotation( "MP:0013739") "The outer coelomic epithelial covering of the testis; a sac of serous tissue covering the testis and the epididymis within which the testis can move about; it covers the tunica albuginea.") AnnotationAssertion(Annotation( ) "The tunica vaginalis is the serous covering of the testis. It is a pouch of serous membrane, derived from the saccus vaginalis of the peritoneum, which in the fetus preceded the descent of the testis from the abdomen into the scrotum. After its descent, that portion of the pouch which extends from the abdominal inguinal ring to near the upper part of the gland becomes obliterated; the lower portion remains as a shut sac, which invests the surface of the testis, and is reflected on to the internal surface of the scrotum; hence it may be described as consisting of a visceral and a parietal lamina.") AnnotationAssertion( "tunica vaginalis testis has two layers: visceral and parietal; the visceral layer lies on the anterolateral surface of the testis and epididymis; the parietal layer lines the inner surface of the scrotal sac") AnnotationAssertion(Annotation( "FMA"^^xsd:string) "we follow FMA is classifying as membranous layer - but this does not account for relationship to mesolthelium (subclass or has part?). The FMA also has 'sac of tunica vaginalis', which is a serous sac.[FMA]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:19179") AnnotationAssertion( "FMA:15863") AnnotationAssertion( "FMA:19844") AnnotationAssertion( "MA:0003253") AnnotationAssertion( "NCIT:C33822") AnnotationAssertion(Annotation( "MP:0013739") "testis tunica vaginalis") AnnotationAssertion(Annotation( "FMA:19844") "tunica vaginalis of testis") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "lamina parietalis") AnnotationAssertion(Annotation( ) "lamina visceralis") AnnotationAssertion(Annotation( ) "processus vaginalis testis") AnnotationAssertion( "tunica vaginalis") AnnotationAssertion(Annotation( ) "tunica vaginalis testis") AnnotationAssertion(Annotation( ) Annotation( ) "tunica vaginalis testis") AnnotationAssertion( "UBERON:0006650") AnnotationAssertion(rdfs:label "tunica vaginalis testis") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/4/4d/Gray1148.png"^^xsd:anyURI) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "EMAPA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "Wikipedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (appendix testis) AnnotationAssertion(Annotation( ) "The appendix testis is a vestigial remnant of the Mullerian duct, present on the upper pole of the testis and attached to the tunica vaginalis. It is present about 90% of the time.") AnnotationAssertion(Annotation( "sic") "the label hydatid of morgagni is ambiguous w.r.t male vs female. The ncita structure 'hydatic of morgani' is male and thus belongs here.") AnnotationAssertion(Annotation( ) "a cystlike remnant of the müllerian duct on the upper end of the testis; corresponding female structure: one of the small pedunculated structures attached to the uterine tubes near their fimbriated end; remnants of the mesonephric ducts[http://medical-dictionary.thefreedictionary.com/].") AnnotationAssertion(Annotation( ) "hydatid of Morgagni") AnnotationAssertion( "hydatid of Morgani") AnnotationAssertion(Annotation( "FMA:18696") "hydatid of morgagni") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:19087") AnnotationAssertion( "EMAPA:29304") AnnotationAssertion( "FMA:19846") AnnotationAssertion( "MA:0003246") AnnotationAssertion( "NCIT:C32747") AnnotationAssertion(Annotation( "ncithesaurus:Hydatid_of_Morgani") "UMLS:C1512521") AnnotationAssertion(Annotation( "FMA:19846") "appendix of testis") AnnotationAssertion(Annotation( "FMA:19846") "testis appendix") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "appendices testis") AnnotationAssertion(Annotation( ) "appendix of the testis") AnnotationAssertion(Annotation( ) "appendix testis") AnnotationAssertion(Annotation( ) Annotation( ) "appendix testis") AnnotationAssertion(Annotation( "FMA:18696") "appendix vesiculosus") AnnotationAssertion( "UBERON:0006651") AnnotationAssertion(rdfs:comment "See also 'vesicular appendage of epoophoron'. TODO: check vesicular appendages") AnnotationAssertion(rdfs:label "appendix testis") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/4/4d/Gray1148.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "EMAPA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "cjm"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "Wikipedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (muscular layer of vagina) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:30997") AnnotationAssertion( "FMA:19976") AnnotationAssertion(Annotation( "FMA:19976") "muscular coat of vagina") AnnotationAssertion(Annotation( "FMA:19976") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "tunica muscularis vaginae") AnnotationAssertion( "vaginal muscularis") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006652") AnnotationAssertion(rdfs:label "muscular layer of vagina") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (glans clitoris) AnnotationAssertion(Annotation( ) Annotation( "BTO:0003117") "Erectile tissue at the end of the clitoris, which is continuous with the intermediate part of the vestibulovaginal bulbs[BTO]. The clitoral glans (glans clitoridis) is an external portion of the clitoris[WP].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0003117") AnnotationAssertion( "EMAPA:19170") AnnotationAssertion( "EMAPA:30829") AnnotationAssertion( "FMA:19999") AnnotationAssertion( "NCIT:C32681") AnnotationAssertion(Annotation( "ncithesaurus:Glans_Clitoris") "UMLS:C0227769") AnnotationAssertion(Annotation( "FMA:19999") "clitoris glans") AnnotationAssertion(Annotation( "FMA:19999") "glans of clitoris") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "glans clitoridis") AnnotationAssertion(Annotation( ) "glans clitoris") AnnotationAssertion( "UBERON:0006653") AnnotationAssertion(rdfs:label "glans clitoris") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/8/8c/Clitoris_inner_anatomy.gif"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "cjm"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (perineal body) AnnotationAssertion(Annotation( ) "The perineal body (or central tendon of perineum) is a pyramidal fibromuscular mass in the middle line of the perineum at the junction between the urogenital triangle and the anal triangle . It is found in both males and females. In males, it is found between the bulb of penis and the anus; in females, is found between the vagina and anus, and about 1.25 cm in front of the latter. The perineal body is essential for the integrity of the pelvic floor, particularly in females. Its rupture during delivery leads to widening of the gap between the anterior free borders of levator ani muscle of both sides, thus predisposing the woman to prolapse of the uterus, rectum, or even the urinary bladder.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:17892") AnnotationAssertion( "FMA:20274") AnnotationAssertion(Annotation( "FMA:20274") "central tendon of perineum") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "central tendinous point") AnnotationAssertion(Annotation( ) "central tendinous point of the perineum") AnnotationAssertion(Annotation( ) "central tendon of perineum") AnnotationAssertion(Annotation( ) Annotation( ) "centrum tendineum perinei") AnnotationAssertion(Annotation( ) Annotation( ) "corpus perineale") AnnotationAssertion( "UBERON:0006654") AnnotationAssertion(rdfs:label "perineal body") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/f/fb/Gray408.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (septum of scrotum) AnnotationAssertion(Annotation( ) "An incomplete wall of connective tissue and nonstriated muscle (dartos fascia) dividing the scrotum into two sacs, each containing a testis.") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:29745") AnnotationAssertion( "FMA:20729") AnnotationAssertion(Annotation( "FMA:20729") "scrotal septum") AnnotationAssertion(Annotation( ) "septum scroti") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006655") AnnotationAssertion(rdfs:label "septum of scrotum") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (deep dorsal vein of penis) AnnotationAssertion(Annotation( ) "The deep dorsal vein of the penis lies beneath the deep fascia of the penis; it receives the blood from the glans penis and corpora cavernosa penis and courses backward in the middle line between the dorsal arteries; near the root of the penis it passes between the two parts of the suspensory ligament and then through an aperture between the arcuate pubic ligament and the transverse ligament of the pelvis, and divides into two branches, which enter the pudendal plexus. The deep vein also communicates below the symphysis pubis with the internal pudendal vein.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:19219") AnnotationAssertion( "FMA:21354") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006656") AnnotationAssertion(rdfs:label "deep dorsal vein of penis") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA/obol"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (glenoid fossa) AnnotationAssertion(Annotation( "PHENOSCAPE:ad"^^xsd:string) "Anatomical cavity for the proximal articular surface of the proximal limb or fin element with the scapulocoracoid or equivalent structure.") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0000749") Annotation( "AAO"^^xsd:string) Annotation( "AAO:LAP"^^xsd:string) "Cavity for the articulation of the forelimb formed by the scapula, coracoid, and clavicle.[AAO]") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0000749") Annotation( "AAO"^^xsd:string) "relationship loss: part_of scapular area (AAO:0000935)[AAO]") AnnotationAssertion(Annotation( "ad") "The glenoid fossa can be associated with the metapterygium in sarcopterygians, or either the meso- or propterygium in basal gnathostomes such as Chondrichthyans") AnnotationAssertion(Annotation( "FMA"^^xsd:string) "FMA also has classes for the bony parts around the cavity - these may be more useful than the cavity term itself") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0000749") AnnotationAssertion( "EMAPA:25122") AnnotationAssertion( "FMA:23275") AnnotationAssertion( "NCIT:C32682") AnnotationAssertion(Annotation( "ncithesaurus:Glenoid_Fossa") "UMLS:C1261046") AnnotationAssertion(Annotation( "FMA:23275") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "cavitas glenoidalis scapulae") AnnotationAssertion(Annotation( "FMA:23275") "cavitus glenoidalis") AnnotationAssertion(Annotation( "FMA:23275") "glenoid cavity") AnnotationAssertion(Annotation( "FMA:23275") "glenoid cavity of scapula") AnnotationAssertion( "glenoid facet") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "cavitas glenoidalis") AnnotationAssertion(Annotation( "AAO:0000749") "glenoid cavity") AnnotationAssertion( "UBERON:0006657") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "glenoid fossa") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/e/ec/Gray328.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "to be revised after scapulocoracoid fixes") ObjectSomeValuesFrom( )) # Class: (interphalangeal joint) AnnotationAssertion(Annotation( ) "A joint that connects one phalanx to another along a proximodistal axis.") AnnotationAssertion(Annotation( "ncithesaurus:Interphalangeal_Joint") "Hinge joints between the phalanges of the hand or foot[ncithesaurus:Interphalangeal_Joint].") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37884") AnnotationAssertion( "FMA:42765") AnnotationAssertion( "NCIT:C101527") AnnotationAssertion( "galen:InterphalangealJoint") AnnotationAssertion(Annotation( "FMA:42765") "inter-phalangeal joint") AnnotationAssertion( "inter-phalanx joint") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006658") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "interphalangeal joint") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "cjm"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "two phalanges in series") ObjectSomeValuesFrom( )) # Class: (cruciate ligament of knee) AnnotationAssertion(Annotation( ) "One of a pair of ligaments arranged like a letter X.[1] They occur in several joints of the body, such as the knee. In a fashion similar to the cords in a toy Jacob's ladder, the crossed ligaments stabilize the joint while allowing a very large range of motion[WP].") AnnotationAssertion(Annotation( "FMA:44611") "cruciate ligament") AnnotationAssertion(Annotation( ) "cruciform ligament") AnnotationAssertion( ) AnnotationAssertion( "FMA:44611") AnnotationAssertion( "galen:CruciateLigament") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:44611") "intracapsular ligament") AnnotationAssertion( "UBERON:0006659") AnnotationAssertion(rdfs:label "cruciate ligament of knee") SubClassOf( ) DisjointClasses( ) # Class: (muscular coat) AnnotationAssertion(Annotation( ) "A region of muscle in many organs in the vertebrate body, adjacent to the submucosa membrane. It is responsible for gut movement such as peristalsis.") AnnotationAssertion( "currently this class conflates a generic layer of muscle and a specific layer found lining the digestive tract (the muscularis externa), typically composed of circular and longitudinal layers (although this varies)") AnnotationAssertion(Annotation( "BTO:0004838") "An outer layer of smooth muscle surrounding a hollow or tubular organ as the bladder, esophagus, large intestine, small intestine, stomach, ureter, uterus, and vagina that often consists of an inner layer of circular fibers serving to narrow the lumen of the organ and an outer layer of longitudinal fibers serving to shorten its length[BTO].") AnnotationAssertion( "typically smooth muscle, but there may be exceptions - in the upper esophagus, part of the externa is skeletal muscle, rather than smooth muscle.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0004838") AnnotationAssertion(Annotation( "ncithesaurus:Muscle_Layer") "UMLS:C0225358") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "muscular layer") AnnotationAssertion(Annotation( "FMA:45634") "muscularis layer") AnnotationAssertion(Annotation( "BTO:0004838") Annotation( ) "tunica muscularis") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "muscular coat") AnnotationAssertion( "muscularis") AnnotationAssertion(Annotation( "BTO:0004838") "muscularis externa") AnnotationAssertion(Annotation( ) "muscularis propria") AnnotationAssertion(Annotation( ) "transverse muscular fibers") AnnotationAssertion(Annotation( "BTO:0004838") "tunica externa") AnnotationAssertion(Annotation( ) "tunica muscularis") AnnotationAssertion( "UBERON:0006660") AnnotationAssertion(rdfs:label "muscular coat") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (epicranial aponeurosis) AnnotationAssertion(Annotation( ) "The galea aponeurotica (epicranial aponeurosis, aponeurosis epicranialis) is a tough layer of dense fibrous tissue which covers the upper part of the cranium; behind, it is attached, in the interval between its union with the Occipitales, to the external occipital protuberance and highest nuchal lines of the occipital bone; in front, it forms a short and narrow prolongation between its union with the Frontales. On either side it gives origin to the Auriculares anterior and superior; in this situation it loses its aponeurotic character, and is continued over the temporal fascia to the zygomatic arch as a layer of laminated areolar tissue. It is closely connected to the integument by the firm, dense, fibro-fatty layer which forms the superficial fascia of the scalp: it is attached to the pericranium by loose cellular tissue, which allows the aponeurosis, carrying with it the integument to move through a considerable distance.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:19210") AnnotationAssertion( "FMA:46768") AnnotationAssertion(Annotation( "FMA:46768") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "aponeurosis epicranialis") AnnotationAssertion(Annotation( "FMA:46768") "aponeurosis of epicranius") AnnotationAssertion(Annotation( "FMA:46768") "epicranial aponeurosis") AnnotationAssertion(Annotation( "FMA:46768") "epicranius aponeurosis") AnnotationAssertion(Annotation( "FMA:46768") "galea aponeurotica") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "cranial aponeurosis") AnnotationAssertion(Annotation( ) "epicranial aponeurosis") AnnotationAssertion(Annotation( ) "galea aponeurosis") AnnotationAssertion(Annotation( ) Annotation( ) "galea aponeurotica; aponeurosis epicranialis") AnnotationAssertion(Annotation( ) "galeal aponeurosis") AnnotationAssertion( "UBERON:0006661") AnnotationAssertion(rdfs:label "epicranial aponeurosis") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/f/fa/Gray378.png"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (musculo-phrenic vein) AnnotationAssertion(Annotation( ) "Any of the veins that accompany the musculophrenic artery and drain blood from the upper abdominal wall, the lower intercostal spaces, and the diaphragm.") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:19222") AnnotationAssertion( "FMA:4732") AnnotationAssertion(Annotation( "FMA:4732") "musculophrenic vein") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006662") AnnotationAssertion(rdfs:label "musculo-phrenic vein") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (hemiazygos vein) AnnotationAssertion(Annotation( ) "The hemiazygos vein (vena azygos minor inferior) is a vein running superiorly in the lower thoracic region, just to the left side of the vertebral column.") AnnotationAssertion( "The major anatomic variation between the pig and other mammalian species is the presence of the large left azygos vein, which enters the coronary sinus (Fig. 1). In other mammals, hemiazygos vein enters the pre- cava.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0004534") AnnotationAssertion( "EMAPA:18251") AnnotationAssertion( "FMA:4944") AnnotationAssertion(Annotation( "FMA:4944") "hemi-azygos vein") AnnotationAssertion(Annotation( "FMA:4944") "hemiazygous vein") AnnotationAssertion(Annotation( "FMA:4944") "inferior hemi-azygos vein") AnnotationAssertion(Annotation( ) Annotation( ) "vena hemiazygos") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "hemiazygos") AnnotationAssertion(Annotation( ) "hemiazygos veins") AnnotationAssertion(Annotation( ) "hemiazygous vein") AnnotationAssertion( "UBERON:0006663") AnnotationAssertion(rdfs:label "hemiazygos vein") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/3/3e/Gray480.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "ISBN:0443065837") ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA/obol"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (greater palatine artery) AnnotationAssertion(Annotation( ) "The greater palatine artery is a terminal branch of the maxillary artery. It branches off of the maxillary artery in the pterygopalatine fossa and descends through the greater palatine foramen along with the greater palatine nerve and supplies the hard palate. It also anastomosis through the incisive canal with the sphenopalatine artery to supply the nasal cavity.") AnnotationAssertion( "TODO - check for synonymy between greater and major; branching_part_of relation is made in FMA at level of descending GPA") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:18754") AnnotationAssertion( "FMA:49795") AnnotationAssertion( "MA:0001993") AnnotationAssertion(Annotation( "MA:0001993") "major palatine artery") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "arteria palatina major") AnnotationAssertion( "UBERON:0006664") AnnotationAssertion(rdfs:label "greater palatine artery") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (accessory hemiazygos vein) AnnotationAssertion(Annotation( ) "The accessory hemiazygos vein (vena azygos minor superior) is a vein on the left side of the vertebral column that generally drains the fifth through eighth intercostal spaces on the left side of the body[WP].") AnnotationAssertion( "TODO - add superclass") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:19217") AnnotationAssertion( "FMA:5011") AnnotationAssertion(Annotation( "FMA:5011") "accessory hemi-azygos vein") AnnotationAssertion(Annotation( "FMA:5011") "superior hemi-azygos vein") AnnotationAssertion(Annotation( "FMA:5011") "vena azygos accessoria") AnnotationAssertion(Annotation( "FMA:5011") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "vena hemiazygos accessoria") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "vena hemiazygos accessoria") AnnotationAssertion( "UBERON:0006665") AnnotationAssertion(rdfs:label "accessory hemiazygos vein") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/3/3e/Gray480.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA/obol"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (great cerebral vein) AnnotationAssertion(Annotation( ) "The great cerebral vein is one of the large blood vessels in the skull draining the cerebrum (brain)[WP,unvetted].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:19311") AnnotationAssertion( "FMA:50993") AnnotationAssertion( "NCIT:C33855") AnnotationAssertion(Annotation( "ncithesaurus:Great_Cerebral_Vein_of_Galen") "UMLS:C0042448") AnnotationAssertion(Annotation( "FMA:50993") "great cerebral vein") AnnotationAssertion(Annotation( "FMA:50993") "great cerebral vein of Galen") AnnotationAssertion(Annotation( "FMA:50993") "vein of Galen") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006666") AnnotationAssertion(rdfs:label "great cerebral vein") SubClassOf( ) # Class: (pituitary fossa) AnnotationAssertion(Annotation( ) "Anatomical cavity that is part of the sella turcica and contains the pituitary gland.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:19195") AnnotationAssertion( "FMA:54721") AnnotationAssertion(Annotation( ) "cavity of hypophyseal fossa") AnnotationAssertion(Annotation( ) "cavity of sella turcica") AnnotationAssertion(Annotation( "FMA:54721") "hypophyseal fossa") AnnotationAssertion(Annotation( "FMA:54721") "hypophysial fossa") AnnotationAssertion(Annotation( "FMA:54721") "pituitary fossa") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006667") AnnotationAssertion(rdfs:label "pituitary fossa") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (carotid canal) AnnotationAssertion(Annotation( ) "On the interior surface of the temporal bone, behind the rough surface of the apex, is the large circular aperture of the carotid canal, which ascends at first vertically, and then, making a bend, runs horizontally forward and medialward. It transmits into the cranium, the internal carotid artery, and the carotid plexus of nerves. Sympathetics to the head also pass through the carotid canal. They have several motor functions: raise the eyelid (superior tarsal muscle), dilate pupil, innervate sweat glands of face and scalp and constricts blood vessels in head[WP].") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:18707") AnnotationAssertion( "FMA:55805") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "canalis caroticus") AnnotationAssertion( "UBERON:0006668") AnnotationAssertion(rdfs:label "carotid canal") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/4/4c/Gray141.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (alveolar canal) AnnotationAssertion(Annotation( ) "The infratemporal surface of the maxilla is pierced about its center by the apertures of the alveolar canals, which transmit the posterior superior alveolar vessels and nerves[WP].") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:25099") AnnotationAssertion( "FMA:57743") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "canales alveolares maxillae") AnnotationAssertion( "UBERON:0006669") AnnotationAssertion(rdfs:comment "Desig pattern note: check design pattern") AnnotationAssertion(rdfs:label "alveolar canal") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/7/71/Gray157.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "EMAPA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (central tendon of diaphragm) AnnotationAssertion(Annotation( "MGI:csmith"^^xsd:string) Annotation( "MP:0012061") "The three-lobed cloverleaf-shaped aponeurosis situated at the center of the diaphragm; the central tendon is fused with the fibrous pericardium that provides attachment for the muscle fibers.") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001399") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( ) "In mammals, the diaphragm muscle divides the thoracoabdominal cavity into thorax and abdomen. In most mammals, the diaphragm is a flat sheet with muscle fibers radiating outward from a central tendon, and the diaphragm's apposition to the cranial surface of the liver gives it a dome-shape. Muscle fiber contraction reduces the curvature of the dome, thereby expanding the thoracic cavity and aspirating air into the lungs.[well established][VHOG]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:17702") AnnotationAssertion( "FMA:58279") AnnotationAssertion( "NCIT:C34119") AnnotationAssertion(Annotation( "ncithesaurus:Central_Tendon_of_the_Diaphragm") "UMLS:C0230162") AnnotationAssertion( "VHOG:0001399") AnnotationAssertion(Annotation( "FMA:58279") "central tendon") AnnotationAssertion(Annotation( "FMA:58279") "centrum tendineum") AnnotationAssertion(Annotation( "FMA:58279") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "centrum tendineum diaphragmatis") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006670") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "central tendon of diaphragm") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "VHOG"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "definitional"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (orbital fat pad) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A fat pad that is part of a orbital region.") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:19152") AnnotationAssertion( "FMA:59005") AnnotationAssertion(Annotation( "FMA:59005") "intraorbital fat pad") AnnotationAssertion(Annotation( "FMA:59005") "orbital fat") AnnotationAssertion(Annotation( "FMA:59005") "orbital fat body") AnnotationAssertion(Annotation( "FMA:59005") "retrobulbar fat") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006671") AnnotationAssertion(rdfs:label "orbital fat pad") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "inferred") ObjectSomeValuesFrom( )) # Class: (incisive canal) AnnotationAssertion(Annotation( ) "One of several bony canals leading from the floor of the nasal cavity into the incisive fossa on the palatal surface of the maxilla; they convey the nasopalatine nerves and branches of the greater palatine arteries that anastomose with the septal branch of the sphenopalatine artery.") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:19034") AnnotationAssertion( "FMA:59107") AnnotationAssertion(Annotation( ) Annotation( ) "canales incisivi") AnnotationAssertion(Annotation( ) Annotation( ) "canalis incisivus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006672") AnnotationAssertion(rdfs:comment "Design pattern notes: see also incisive duct and foramen") AnnotationAssertion(rdfs:label "incisive canal") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "EMAPA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (mandibular canal) AnnotationAssertion(Annotation( ) "A canal within the mandible that contains the inferior alveolar nerve, inferior alveolar artery, and inferior alveolar vein. It runs obliquely downward and forward in the ramus, and then horizontally forward in the body, where it is placed under the alveoli and communicates with them by small openings.") AnnotationAssertion(Annotation( "TAO") "TAO has mandibular sensory canal, which is part of the lateral line system") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:19161") AnnotationAssertion( "FMA:59473") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "EMAPA:19161") "inferior alveolar canal") AnnotationAssertion( "UBERON:0006673") AnnotationAssertion(rdfs:label "mandibular canal") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/6/6c/Gray1003.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (inguinal ring) AnnotationAssertion(Annotation( ) "An entrance or exit of the inguinal canal.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:29307") AnnotationAssertion( "FMA:65075") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006674") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "inguinal ring") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (venous valve) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A valve that is part of a vein.") AnnotationAssertion( "FMA:68095") AnnotationAssertion(Annotation( "FMA:68095") "valve of vein") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006675") AnnotationAssertion(rdfs:label "venous valve") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (muscularis mucosa) AnnotationAssertion(Annotation( ) "A thin layer of smooth muscle found in most parts of the gastrointestinal tract, located outside the lamina propria mucosae and separating it from the submucosa[WP].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0004839") AnnotationAssertion( "EMAPA:35385") AnnotationAssertion( "FMA:68413") AnnotationAssertion( "NCIT:C33149") AnnotationAssertion(Annotation( "ncithesaurus:Muscularis_Mucosa") "UMLS:C0225357") AnnotationAssertion( "galen:MuscularisMucosae") AnnotationAssertion(Annotation( "EMAPA:35385") "gut muscularis") AnnotationAssertion(Annotation( "FMA:68413") "muscularis mucosae") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0004839") "lamina muscularis mucosa") AnnotationAssertion(Annotation( ) "laminar muscularis mucosa") AnnotationAssertion( "UBERON:0006676") AnnotationAssertion(rdfs:label "muscularis mucosa") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/5/54/Gray1058.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (surface of epithelium) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An anatomical boundary that adjacent_to a epithelium.") AnnotationAssertion( "FMA:70997") AnnotationAssertion(Annotation( "FMA:70997") "epithelium surface") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006677") AnnotationAssertion(rdfs:label "surface of epithelium") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (foramen secundum) AnnotationAssertion(Annotation( ) "A foramen in the septum secundum.") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001471") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( ) "Second of the two openings to perforate the septum primum between the two atria of the embryonic heart. [TFD][VHOG]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001471") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0721676678 p.433") "The tetrapod clade develops a complete atrial septum and loses the fifth aortic arch altogether. [ISBN:978-0030223693 Liem KF, Bemis WE, Walker WF, Grande L, Functional Anatomy of the Vertebrates: An Evolutionary Perspective (2001) p.620]; [about heart development] In the various tetrapod classes ontogenetic events essentially recapitulate the phylogenetic stages.[well established][VHOG]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0001828") AnnotationAssertion( "EMAPA:17863") AnnotationAssertion( "FMA:71105") AnnotationAssertion( "NCIT:C34179") AnnotationAssertion(Annotation( "ncithesaurus:Foramen_Secundum") "UMLS:C1517293") AnnotationAssertion( "VHOG:0001471") AnnotationAssertion(Annotation( "VHOG:0001471") Annotation( ) "ostium secundum") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "foramen secundum") AnnotationAssertion( "UBERON:0006678") AnnotationAssertion(rdfs:label "foramen secundum") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (carina of trachea) AnnotationAssertion(Annotation( ) "A cartilaginous ridge within the trachea that runs anteroposteriorly between the two primary bronchi at the site of the tracheal bifurcation at the lower end of the trachea.") AnnotationAssertion(Annotation( "FMA:7465") "carina") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:18407") AnnotationAssertion( "FMA:7465") AnnotationAssertion( "NCIT:C25264") AnnotationAssertion(Annotation( "ncithesaurus:Carina") "UMLS:C0225594") AnnotationAssertion(Annotation( "EMAPA:18407") "carina tracheae") AnnotationAssertion(Annotation( "FMA:7465") "tracheal carina") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "bifurcation of the trachea") AnnotationAssertion(Annotation( ) "carina (anatomy)") AnnotationAssertion(Annotation( ) "carina of trachea") AnnotationAssertion(Annotation( ) Annotation( ) "carina tracheae") AnnotationAssertion( "UBERON:0006679") AnnotationAssertion(rdfs:label "carina of trachea") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/f/f2/Diagrama_de_los_pulmones-c.svg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (trachealis) AnnotationAssertion(Annotation( ) "A smooth muscle tissue that bridges the gap between free ends of C-shaped cartilages at the posterior border of the trachea, adjacent to the esophagus. A primary function of the trachealis is to constrict the windpipe, allowing for higher velocity of air in the windpipe during coughing[WP, modified].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:19193") AnnotationAssertion( "FMA:7466") AnnotationAssertion(Annotation( "FMA:7466") "tracheal muscle") AnnotationAssertion(Annotation( "FMA:7466") "trachealis muscle") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006680") AnnotationAssertion(rdfs:label "trachealis") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (interthalamic adhesion) AnnotationAssertion(Annotation( ) "The medial surface of the thalamus constitutes the upper part of the lateral wall of the third ventricle, and is connected to the corresponding surface of the opposite thalamus by a flattened gray band, the Interthalamic adhesion (massa intermedia, middle commissure, gray commissure). In non-human mammals it is a large structure. In humans this mass averages about 1 cm in length in its antero-posterior diameter. It sometimes consists of two parts and occasionally is absent. The interthalamic adhesion is found in 70-80% of humans. It is present more often in females and larger than in males by an average of 53 percent. When absent in development, no noticeable deficit has been observed. It contains nerve cells and nerve fibers; a few of the latter may cross the middle line, but most of them pass toward the middle line and then curve lateralward on the same side.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:InTrM") AnnotationAssertion( "BAMS:itha") AnnotationAssertion( "EMAPA:18546") AnnotationAssertion( "FMA:74869") AnnotationAssertion(Annotation( "FMA:74869") "interthalamic connection") AnnotationAssertion(Annotation( "FMA:74869") "middle commissure") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006681") AnnotationAssertion(rdfs:label "interthalamic adhesion") SubClassOf( ) # Class: (hypoglossal canal) AnnotationAssertion(Annotation( ) "The hypoglossal canal is a bony canal in the occipital bone of the skull.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:19012") AnnotationAssertion( "FMA:75370") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "EMAPA:19012") "anterior condylar canal") AnnotationAssertion(Annotation( ) Annotation( ) "canalis nervi hypoglossi") AnnotationAssertion(Annotation( ) "hyperglossal canal") AnnotationAssertion( "UBERON:0006682") AnnotationAssertion(rdfs:label "hypoglossal canal") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (posterior fontanelle) AnnotationAssertion(Annotation( ) "A gap between bones in the skull at the junction of the sagittal suture and lambdoidal suture.") AnnotationAssertion( "In humans it generally closes in 6-8 weeks from birth. A delay in closure is associated with congential hypothyroidism") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:19200") AnnotationAssertion( "FMA:75440") AnnotationAssertion(Annotation( ) "fonticulus posterior") AnnotationAssertion( "occipital fontanelle") AnnotationAssertion(Annotation( ) "posterior fontanelle of skull") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006683") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "posterior fontanelle") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/b/b3/Gray197.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (sphenoidal fontanelle) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:19229") AnnotationAssertion( "FMA:75441") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "sphenoidal fontanelle") AnnotationAssertion( "UBERON:0006684") AnnotationAssertion(rdfs:comment "See also FMA:264720") AnnotationAssertion(rdfs:label "sphenoidal fontanelle") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/6/6a/Pterion.PNG"^^xsd:anyURI) SubClassOf( ) # Class: (pharyngeal tubercle) AnnotationAssertion(Annotation( ) "On the lower surface of the basilar part of occipital bone, about 1 cm. in front of the foramen magnum, is the pharyngeal tubercle which gives attachment to the fibrous raphC) of the pharynx, also known as the pharyngeal raphe. This is the point of attachment for the superior pharyngeal constrictor muscle.") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:19250") AnnotationAssertion( "FMA:75746") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006685") AnnotationAssertion(rdfs:label "pharyngeal tubercle") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf(Annotation( "EMAPA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (spinal vein) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A vein that is part of a vertebral column.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:18255") AnnotationAssertion( "FMA:76735") AnnotationAssertion( "MA:0002108") AnnotationAssertion(Annotation( "FMA:76735") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "vena spinalis") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:76735") "spinal branch") AnnotationAssertion( "UBERON:0006686") AnnotationAssertion(rdfs:label "spinal vein") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (median sacral vein) AnnotationAssertion(Annotation( ) "The median sacral vein (or middle sacral veins) accompany the corresponding artery along the front of the sacrum, and join to form a single vein, which ends in the left common iliac vein; sometimes in the angle of junction of the two iliac veins.") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:26064") AnnotationAssertion( "FMA:77168") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006687") AnnotationAssertion(rdfs:label "median sacral vein") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA/obol"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (sublingual caruncle) AnnotationAssertion(Annotation( ) "The sublingual caruncle is a site on either side of the frenulum linguae on the sublingual surface of the tongue. There it denotes the site at which the submandibular gland empties into the oral cavity.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:18961") AnnotationAssertion( "FMA:77273") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "caruncula sublingualis") AnnotationAssertion( "UBERON:0006688") AnnotationAssertion(rdfs:label "sublingual caruncle") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/1/13/Gray1202.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (frenulum of tongue) AnnotationAssertion(Annotation( "MGI:anna"^^xsd:string) "A small fold of mucous membrane extending from the floor of the mouth to the midline of the underside of the tongue.") AnnotationAssertion( "frenulum") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:18656") AnnotationAssertion( "FMA:54659") AnnotationAssertion( "NCIT:C87076") AnnotationAssertion(Annotation( "ncithesaurus:Frenulum") "UMLS:C2339893") AnnotationAssertion(Annotation( ) "frenulum linguae") AnnotationAssertion(Annotation( ) Annotation( ) "frenulum linguae") AnnotationAssertion(Annotation( ) "frenulum linguæ") AnnotationAssertion(Annotation( ) "frenulum of the tongue") AnnotationAssertion(Annotation( ) "lingual frenulum") AnnotationAssertion(Annotation( "FMA:54659") "tongue frenulum") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "lingual frenum") AnnotationAssertion( "UBERON:0006689") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "frenulum of tongue") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/1/13/Gray1202.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (deep dorsal vein of clitoris) AnnotationAssertion(Annotation( ) "The deep dorsal vein of clitoris is a vein which drains to the vesical plexus.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:19218") AnnotationAssertion( "FMA:77504") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006690") AnnotationAssertion(rdfs:label "deep dorsal vein of clitoris") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA/obol"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (tentorium cerebelli) AnnotationAssertion(Annotation( ) "The tentorium cerebelli or cerebellar tentorium is an extension of the dura mater that separates the cerebellum from the inferior portion of the occipital lobes.") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001298") Annotation( "VHOG"^^xsd:string) Annotation( ) "The tentorium cerebelli or cerebellar tentorium (Latin: [][VHOG]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:18210") AnnotationAssertion( "FMA:83966") AnnotationAssertion( "NCIT:C33749") AnnotationAssertion(Annotation( "ncithesaurus:Tentorium_Cerebelli") "UMLS:C0228121") AnnotationAssertion( "VHOG:0001298") AnnotationAssertion(Annotation( "FMA:83966") "cerebellar tentorium") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006691") AnnotationAssertion(rdfs:label "tentorium cerebelli") AnnotationAssertion( "Illu:tentorium.jpg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (vertebral canal) AnnotationAssertion(Annotation( ) Annotation( ) "A conduit enclosed within the vertebral foramen of the vertebrae through which the spinal cord passes.") AnnotationAssertion( "TODO - check neural vs vertebral canal; embryonic vs adult?") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0000693") Annotation( "AAO"^^xsd:string) Annotation( "AAO:LAP"^^xsd:string) "Canal formed by the vertebral centra ventrally, the pedicels laterally, and the neural arches dorsally that encloses and protects the spinal cord.[AAO]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0000693") AnnotationAssertion( "FMA:9680") AnnotationAssertion( "GAID:242") AnnotationAssertion( "NCIT:C33869") AnnotationAssertion( "NCIT:C34221") AnnotationAssertion(Annotation( "ncithesaurus:Vertebral_Canal") "UMLS:C0037922") AnnotationAssertion(Annotation( "ncithesaurus:Neural_Canal") "UMLS:C1522467") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "c. vertebralis") AnnotationAssertion(Annotation( "AAO:0000693") "foramen vertebrale") AnnotationAssertion(Annotation( "AAO:0000693") "neural canal") AnnotationAssertion(Annotation( "AAO:0000693") "spinal canal") AnnotationAssertion(Annotation( ) "spinal cavity") AnnotationAssertion(Annotation( ) "vertebral canal") AnnotationAssertion( "UBERON:0006692") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "vertebral canal") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/3/30/Gray82.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete protein-based cuticle) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006693") AnnotationAssertion(rdfs:label "obsolete protein-based cuticle") AnnotationAssertion(rdfs:seeAlso "GO:0007592") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (cerebellum vasculature) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A vasculature that is part of a cerebellum.") AnnotationAssertion( "FMA:268519") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006694") AnnotationAssertion(rdfs:label "cerebellum vasculature") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (mammillary axonal complex) AnnotationAssertion(Annotation( "GO:0061373") "The mammillary axonal complex is formed by the axons from the lateral, medial mammillary and the dorsal premammillary nuclei which share a branching pattern. Every neuron gives off one axonal stem that bifurcates into 2 branches. One of the branches is directed dorsally to the thalamus and another caudally to the midbrain[GO].") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006695") AnnotationAssertion(rdfs:label "mammillary axonal complex") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (mammillothalamic axonal tract) AnnotationAssertion(Annotation( "NLXANAT:1010016") "A fiber pathway that originates from neurons in the posterior hypothalamic region and projects to various nuclei of the anterior nuclear group of the thalamus. It is a composite structure that consists of the mammillothalamic tract of the hypothalamus and the mammillothalamic tract of the thalamus (Carpenter-1983). (from Brain Info.org).") AnnotationAssertion(Annotation( "GO:0061374") "The mammillothalamic tract is the collection of axons that connects the two major subdivisions of the diencephalon (hypothalamus and thalamus) and closes the diencephalic circuit[GO][GO:0061374].") AnnotationAssertion( "UBERON:0009642") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:mt") AnnotationAssertion( "BAMS:mtt") AnnotationAssertion( "DHBA:10586") AnnotationAssertion( "DMBA:17782") AnnotationAssertion( "FMA:83849") AnnotationAssertion( "HBA:9266") AnnotationAssertion( "NLXANAT:1010016") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) Annotation( ) "fasciculus mammillothalamicus") AnnotationAssertion(Annotation( "FMA:83849") "mammillothalamic fasciculus") AnnotationAssertion(Annotation( "FMA:83849") "mammillothalamic tract") AnnotationAssertion(Annotation( "FMA:83849") "vicq d'azyr's bundle") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "bundle of vicq d%27azyr") AnnotationAssertion(Annotation( ) "bundle of vicq d%e2%80%99azyr") AnnotationAssertion(Annotation( ) Annotation( ) "fasciculus mammillothalamicus") AnnotationAssertion(Annotation( ) "mamillo-thalamic tract") AnnotationAssertion(Annotation( ) "mammillo-thalamic fasciculus") AnnotationAssertion(Annotation( "BAMS:mt") "mammillo-thalamic tract") AnnotationAssertion(Annotation( ) "mammillothalamic tract") AnnotationAssertion(Annotation( ) "thalamomammillary fasciculus") AnnotationAssertion( "UBERON:0006696") AnnotationAssertion(rdfs:comment "The mammillothalamic fasciculus arises from cells in both the medial and lateral nuclei of the mammillary body and by fibers that are directly continued from the fornix. The Mammillothalamic fasciculus then connects the mammillary body to the dorsal tegmental nuclei, the ventral tegmental nuclei, and the anterior thalamic nucleus [WP]") AnnotationAssertion(rdfs:label "mammillothalamic axonal tract") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (mammillotectal axonal tract) AnnotationAssertion(Annotation( "GO:0061375") "The mammillotectal tract is the collection of axons that connects the ventral diencephalon to the superior colliculus.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006697") AnnotationAssertion(rdfs:label "mammillotectal axonal tract") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (mammillotegmental axonal tract) AnnotationAssertion(Annotation( "GO:0061376") "The mammillotegmental tract is the collection of axons that connects the ventral diencephalon to the tegmentum and pons.") AnnotationAssertion( "UBERON:0002725") AnnotationAssertion(Annotation( "BIRNLEX:1497") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "MTG") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:mtg") AnnotationAssertion( "BIRNLEX:1497") AnnotationAssertion( "DHBA:12065") AnnotationAssertion( "DMBA:17781") AnnotationAssertion( "FMA:62058") AnnotationAssertion( "HBA:265505178") AnnotationAssertion( "MBA:681") AnnotationAssertion(Annotation( "BIRNLEX:1497") "UMLS:C0228376") AnnotationAssertion(Annotation( "BIRNLEX:1497") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=423") AnnotationAssertion(Annotation( "FMA:62058") "Gudden tract") AnnotationAssertion(Annotation( "FMA:62058") "mammillotegmental fasciculus") AnnotationAssertion(Annotation( "FMA:62058") "mammillotegmental tract") AnnotationAssertion(Annotation( "BIRNLEX:1497") "mammillotegmental tract of hypothalamus") AnnotationAssertion(Annotation( "FMA:62058") "von Gudden's tract") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:423") Annotation( ) "fasciculus mamillotegmentalis") AnnotationAssertion(Annotation( "NeuroNames:423") "mammillo-tegmental tract") AnnotationAssertion(Annotation( "NeuroNames:423") "mammillotegmental tract (Gudden)") AnnotationAssertion(Annotation( "BAMS:mtg") "medial tegmental tract") AnnotationAssertion(Annotation( "NeuroNames:423") Annotation( ) "tractus hypothalamicotegmentalis") AnnotationAssertion(Annotation( "NeuroNames:423") Annotation( ) "tractus hypothalamotegmentalis") AnnotationAssertion(Annotation( "NeuroNames:423") Annotation( ) "tractus mamillo-tegmentalis") AnnotationAssertion(Annotation( "NeuroNames:423") Annotation( ) "tractus mammillotegmentalis") AnnotationAssertion( "UBERON:0006698") AnnotationAssertion(rdfs:label "mammillotegmental axonal tract") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (foramen cecum of tongue) AnnotationAssertion(Annotation( ) Annotation( "MP:0013234") "The median pit on the dorsum of the posterior part of the tongue, from which the limbs of a V-shaped furrow run forward and outward; the foramen cecum is the point of attachment of the thyroglossal duct and is formed during the embryological descent of the thyroid gland.") AnnotationAssertion( "consider merging with FC of thyroid") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:17069") AnnotationAssertion( "FMA:54828") AnnotationAssertion( "MA:0000725") AnnotationAssertion(Annotation( "FMA:54828") "Morand's foramen") AnnotationAssertion(Annotation( "MP:0013234") "Morgagni foramen") AnnotationAssertion(Annotation( "MP:0013234") "blind foramen of tongue") AnnotationAssertion(Annotation( "MP:0013234") "cecal foramen of tongue") AnnotationAssertion(Annotation( "MP:0013234") "ductus lingualis") AnnotationAssertion(Annotation( ) Annotation( ) "foramen caecum linguae") AnnotationAssertion(Annotation( "FMA:54828") "foramen cecum of tongue") AnnotationAssertion(Annotation( "FMA:54828") "foramen of Morgagni") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "f. caecum linguae") AnnotationAssertion( "UBERON:0006699") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "foramen cecum of tongue") AnnotationAssertion( "Foramen:caecum.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses( ) # Class: (foramen cecum of frontal bone) AnnotationAssertion(Annotation( ) Annotation( ) "The frontal crest of the frontal bone ends below in a small notch which is converted into a foramen, the foramen cecum, by articulation with the ethmoid. This foramen varies in size in different subjects, and is frequently impervious; when open, it transmits a vein from the nose to the superior sagittal sinus. This has clinical importance in that infections of the nose and nearby areas can be transmitted to the meninges and brain from what is known as the danger triangle of the face.") AnnotationAssertion( "TODO - check if this is what the FMA ID really denotes") AnnotationAssertion( ) AnnotationAssertion( "FMA:57443") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "f. caecum ossis frontalis") AnnotationAssertion(Annotation( ) Annotation( ) "foramen caecum ossis frontalis") AnnotationAssertion( "UBERON:0006713") AnnotationAssertion(rdfs:label "foramen cecum of frontal bone") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/9/91/Gray135.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (tibiofibula) AnnotationAssertion(Annotation( "AAO:Maglia_et_al_2007") "Paired, endochondral bones formed by the fusion of the tibia and fibula. They form the shanks, extending from the knees to the ankles.") AnnotationAssertion( "AAO:0000902") AnnotationAssertion( "XAO:0003213") AnnotationAssertion(Annotation( "XAO:0003213") "tibia-fibula") AnnotationAssertion( "tibiofibula") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "AAO:0000902") "os cruris") AnnotationAssertion( "UBERON:0006714") AnnotationAssertion(rdfs:label "tibiofibula") SubClassOf( ) SubClassOf(Annotation( "AAO"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (radio-ulna) AnnotationAssertion(Annotation( "AAO:Maglia_et_al_2007") "Paired, long bones of endochondral origin formed by the fusion of the radius and ulna.") AnnotationAssertion( "AAO:0000901") AnnotationAssertion( "XAO:0003209") AnnotationAssertion(Annotation( "XAO:0003209") "radioulna") AnnotationAssertion( "radius+ulna") AnnotationAssertion(Annotation( "XAO:0003209") "radius-ulna") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006715") AnnotationAssertion(rdfs:label "radio-ulna") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (mesopodium region) AnnotationAssertion(Annotation( ) Annotation( ) Annotation( "MA:th"^^xsd:string) "The third segment of the limb, including either the wrist segment (carpus) or the ankle segment (tarsus).") AnnotationAssertion( "Naming conventions for pod terms under discussion within phenoscape group") AnnotationAssertion( ) AnnotationAssertion( "carpus/tarsus") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "mesopodial limb segment") AnnotationAssertion( "mesopodial segment") AnnotationAssertion( "uberon") AnnotationAssertion( "mesopod") AnnotationAssertion( "UBERON:0006716") AnnotationAssertion(rdfs:label "mesopodium region") SubClassOf( ) SubClassOf(Annotation( "MA:th"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (autopodial skeleton) AnnotationAssertion(Annotation( ) "The collection of all skeletal elements in an autopodium region.") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "VSAO:0005019") Annotation( "VSAO"^^xsd:string) Annotation( "VSAO:NI") "Distal section of the limb skeleton, consisting of the anterior autopodium or posterior autopodium.[VSAO]") AnnotationAssertion( "Naming conventions for pod terms under discussion within phenoscape group") AnnotationAssertion( "VSAO:0005019") AnnotationAssertion(Annotation( ) "autopod skeleton") AnnotationAssertion(Annotation( "VSAO:0005019") "autopodial skeleton") AnnotationAssertion(Annotation( ) "skeletal parts of autopod") AnnotationAssertion(Annotation( ) "skeleton of autopod") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "VSAO:0005019") Annotation( "VSAO:NI"^^xsd:string) "autopodium") AnnotationAssertion( "UBERON:0006717") AnnotationAssertion(rdfs:label "autopodial skeleton") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (medial pterygoid muscle) AnnotationAssertion(Annotation( "MFMO:0000083") "The medial pterygoid is a pharyngeal arch 1 muscle that participates in oral/pharyngeal behaviors and is innervated by the nerve to the medial pterygoid and attaches to the cranial base and the medial side of the mandibular angle.") AnnotationAssertion(Annotation( "2012-07-02"^^xsd:string) Annotation( "FEED"^^xsd:string) Annotation( "http://www.feedexp.org"^^xsd:string) "The medial pterygoid is a pharyngeal arch 1 muscle that participates in oral/pharyngeal behaviors and is innervated by the nerve to the medial pterygoid and attaches to the cranial base and the medial side of the mandibular angle.[FEED]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0005226") AnnotationAssertion( "EMAPA:25141") AnnotationAssertion( "FMA:49011") AnnotationAssertion( "MA:0002361") AnnotationAssertion( "MFMO:0000083") AnnotationAssertion( "NCIT:C32861") AnnotationAssertion(Annotation( "ncithesaurus:Internal_Pterygoid_Muscle") "UMLS:C1512882") AnnotationAssertion(Annotation( ) Annotation( ) "musculus pterygoideus internus") AnnotationAssertion(Annotation( ) Annotation( ) "musculus pterygoideus medialis") AnnotationAssertion(Annotation( "MA:0002361") "pterygoid medialis") AnnotationAssertion(Annotation( ) "pterygoideus medial") AnnotationAssertion(Annotation( ) "pterygoideus medialis") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "internal pterygoid") AnnotationAssertion( "internal pterygoid muscle") AnnotationAssertion(Annotation( ) "medial pterygoid") AnnotationAssertion(Annotation( ) "pterygoidei internus") AnnotationAssertion(Annotation( ) "pterygoideus internus") AnnotationAssertion( "UBERON:0006718") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "medial pterygoid muscle") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/e/ec/Musculuspterygoideusmedialis.png"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "MFMO") ObjectSomeValuesFrom( )) DisjointClasses(Annotation( "lexical"^^xsd:string) ) # Class: (lateral pterygoid muscle) AnnotationAssertion(Annotation( "MFMO:0000074") "Pharyngeal arch 1 muscle that participates in oral/pharyngeal behaviors, is innervated by the lateral pterygoid nerve branches, and attaches to the condylar process of the mandible and temporomandibular joint (TMJ) capsule, and the cranial base.") AnnotationAssertion(Annotation( "2012-07-02"^^xsd:string) Annotation( "FEED"^^xsd:string) Annotation( "http://www.feedexp.org"^^xsd:string) "Pharyngeal arch 1 muscle that participates in oral/pharyngeal behaviors, is innervated by the lateral pterygoid nerve branches, and attaches to the condylar process of the mandible and TMJ capsule, and the cranial base.[FEED]") AnnotationAssertion( "only masticatory muscle that depresses mandible (opens jaw)") AnnotationAssertion(Annotation( "FEED:rd") Annotation( "MA:0002360") "pterygoid lateralis") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:25140") AnnotationAssertion( "FMA:49015") AnnotationAssertion( "MA:0002360") AnnotationAssertion( "MFMO:0000074") AnnotationAssertion( "NCIT:C32570") AnnotationAssertion(Annotation( "ncithesaurus:External_Pterygoid_Muscle") "UMLS:C1517045") AnnotationAssertion(Annotation( "MFMO:0000074") "external pterygoid muscle") AnnotationAssertion(Annotation( ) Annotation( "FEED:rd") "lateral pteregoid") AnnotationAssertion(Annotation( ) Annotation( "FEED:rd") "lateral pteregoid muscle") AnnotationAssertion(Annotation( "FEED:rd") Annotation( "FMA:49015") "lateral pterygoid") AnnotationAssertion(Annotation( ) Annotation( "FEED:rd") Annotation( ) "m. pterygoideus externus") AnnotationAssertion(Annotation( ) Annotation( "FEED:rd") Annotation( ) "m. pterygoideus lateralis") AnnotationAssertion(Annotation( "FEED:rd") Annotation( "FMA:49015") "musculus pterygoides lateralis") AnnotationAssertion(Annotation( ) Annotation( "FEED:rd") Annotation( ) "musculus pterygoideus externus") AnnotationAssertion(Annotation( ) Annotation( "FEED:rd") Annotation( ) "musculus pterygoideus lateralis") AnnotationAssertion(Annotation( ) Annotation( "FEED:rd") "pterygoideus externus") AnnotationAssertion(Annotation( ) Annotation( "FEED:rd") "pterygoideus externus muscle") AnnotationAssertion(Annotation( ) Annotation( "FEED:rd") "pterygoideus lateral") AnnotationAssertion(Annotation( ) Annotation( "FEED:rd") "pterygoideus lateral muscle") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006719") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "lateral pterygoid muscle") AnnotationAssertion(rdfs:seeAlso "https://github.com/obophenotype/uberon/issues/539"^^xsd:anyURI) AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/b/bb/Musculuspterygoideuslateralis.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "Great wing of sphenoid and pterygoid plate") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (pterygoid muscle) AnnotationAssertion( "We use this class to group the medial and lateral pterygoids of mammals as well as the pterygoideus of amphibians and reptiles. Note that FEED includes a distinct class for the reptilian pterygoideus. In future, this branch of the ontology may be refined to include a more complete classification of jaw adductors across gnathostomes. See for example DOI:10.1134/S1062359010090050") AnnotationAssertion( ) AnnotationAssertion( "AAO:0010730") AnnotationAssertion( "EMAPA:25139") AnnotationAssertion( "GAID:147") AnnotationAssertion( "MESH:D011626") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "EMAPA:25139") Annotation( ) "pterygoid") AnnotationAssertion( "pterygoideus") AnnotationAssertion( "pterygoideus muscle") AnnotationAssertion( "UBERON:0006720") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "pterygoid muscle") SubClassOf( ) SubClassOf(Annotation( "generalized") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (alisphenoid bone) AnnotationAssertion(Annotation( "ISBN:0-683-40008-8"^^xsd:string) Annotation( "MGI:smb"^^xsd:string) Annotation( "MP:0003235") "Either of the broad curved wing like expanses on each side of the sphenoid bone in adults; may exist independently in the young.") AnnotationAssertion(Annotation( ) "The alisphenoid in mammals is part cartilage bone, part membrane bone[PMC1231738] In many mammals, e.g. the dog, the greater wing of the sphenoid bone stays through life a separate bone called the alisphenoid[WP].") AnnotationAssertion( "The mammalian alisphenoid forms the greater wing of the sphenoid bone, which contributes a small part of the skull vault just caudal to the orbit, and also underlies the basal part of the frontal and parietal bones in the fetus (Iseki et al. 1997)") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:36567") AnnotationAssertion( "FMA:52868") AnnotationAssertion( "MA:0002772") AnnotationAssertion(Annotation( "FMA:52868") "ala major (os sphenoidale)") AnnotationAssertion(Annotation( "MA:0002772") Annotation( ) "alisphenoid bone") AnnotationAssertion(Annotation( "FMA:52868") "greater wing of sphenoid") AnnotationAssertion(Annotation( "FMA:52868") "greater wing of sphenoidal bone") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "ala major ossis sphenoidalis") AnnotationAssertion(Annotation( ) Annotation( ) "epipterygoid") AnnotationAssertion(Annotation( ) Annotation( ) "epipterygoid bone") AnnotationAssertion(Annotation( "MA:0002772") "greater wing of sphenoid bone") AnnotationAssertion( "UBERON:0006721") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "alisphenoid bone") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/3/35/Gray145.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "MA"^^xsd:string) ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "MA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA-abduced-lr"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "ISBN:1588903958") ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (manubrium of malleus) AnnotationAssertion(Annotation( ) "The handle of the malleus; the portion that extends downward, inward, and backward from the neck of the malleus; it is embedded throughout its length in the tympanic membrane.") AnnotationAssertion(Annotation( ) "Conical in shape, with the cone extending inwards (e.g. mammals) or outwards (e.g. in birds)") AnnotationAssertion( ) AnnotationAssertion( "FMA:52760") AnnotationAssertion( "MA:0002985") AnnotationAssertion(Annotation( "FMA:52760") "malleus handle") AnnotationAssertion(Annotation( "FMA:52760") "manubrium of malleus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "MA:0002985") "handle of malleus") AnnotationAssertion(Annotation( "MA:0002985") "malleal manubrium") AnnotationAssertion(Annotation( "MA:0002985") "malleus handle") AnnotationAssertion(Annotation( "MA:0002985") "malleus manubrium") AnnotationAssertion(Annotation( "MA:0002985") "manubrium mallei") AnnotationAssertion(Annotation( "MA:0002985") "manubrium of malleus") AnnotationAssertion( "UBERON:0006722") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "manubrium of malleus") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "cjm"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (cochlear modiolus) AnnotationAssertion(Annotation( "ISBN:0-683-40008-8"^^xsd:string) Annotation( "MGI:anna"^^xsd:string) Annotation( "MP:0003309") "The central cone shaped core of spongy bone about which turns the spiral canal.") AnnotationAssertion(Annotation( "MA:0001182") "modiolus") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0001693") AnnotationAssertion( "EMAPA:35575") AnnotationAssertion( "FMA:61278") AnnotationAssertion( "MA:0001182") AnnotationAssertion( "NCIT:C33135") AnnotationAssertion(Annotation( "ncithesaurus:Modiolus") "UMLS:C0229503") AnnotationAssertion(Annotation( "FMA:61278") "cochlea modiolus") AnnotationAssertion(Annotation( "FMA:61278") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "modiolus cochleae") AnnotationAssertion(Annotation( "FMA:61278") "modiolus of cochlea") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0001693") "columella cochleae") AnnotationAssertion( "UBERON:0006723") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "cochlear modiolus") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/1/16/Gray921.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "MA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses( ) # Class: (osseus spiral lamina) AnnotationAssertion(Annotation( ) "The osseous spiral lamina is a bony shelf or ledge which projects from the modiolus into the interior of the canal, and, like the canal, takes two-and-three-quarter turns around the modiolus. It reaches about half-way toward the outer wall of the tube, and partially divides its cavity into two passages or scalae, of which the upper is named the scala vestibuli, while the lower is termed the scala tympani.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:35622") AnnotationAssertion( "FMA:77710") AnnotationAssertion( "MA:0001184") AnnotationAssertion( "MESH:D013137") AnnotationAssertion(Annotation( "FMA:77710") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "lamina modioli cochleae") AnnotationAssertion(Annotation( "FMA:77710") "lamina of modiolus cochleae") AnnotationAssertion(Annotation( "FMA:77710") "lamina of modiolus of cochlea") AnnotationAssertion( "osseous spiral lamina") AnnotationAssertion(Annotation( "FMA:77710") "osseous spiral lamina of cochlea") AnnotationAssertion( "spiral lamina of modiolus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "MESH:A09.246.631.246.930") "spiral lamina") AnnotationAssertion( "UBERON:0006724") AnnotationAssertion(rdfs:label "osseus spiral lamina") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (spiral ligament) AnnotationAssertion(Annotation( ) Annotation( ) "A spiral thickening of the fibrous lining of the cochlear wall. Spiral ligament secures the membranous cochlear duct to the bony spiral canal of the cochlea. Its spiral ligament fibrocytes function in conjunction with the stria vascularis to mediate cochlear ion homeostasis.") AnnotationAssertion(Annotation( "FMA"^^xsd:string) "this is not classified as a ligament in FMA") AnnotationAssertion( "UBERON:0028186") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:2524") AnnotationAssertion( "EMAPA:35798") AnnotationAssertion( "FMA:77834") AnnotationAssertion( "MA:0001192") AnnotationAssertion( "MESH:D055493") AnnotationAssertion(Annotation( ) Annotation( ) "ligamentum spirale ductus cochlearis") AnnotationAssertion(Annotation( ) "spiral cochlear ligament") AnnotationAssertion(Annotation( "BIRNLEX:2524") "spiral ligament of cochlea") AnnotationAssertion(Annotation( "FMA:77834") "spiral ligament of cochlear duct") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006725") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "spiral ligament") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "MESH-def") ObjectSomeValuesFrom( )) # Class: (outer canthus) AnnotationAssertion(Annotation( ) "A corner of the outer (lateral) part of an eye.") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001571") Annotation( "VHOG"^^xsd:string) Annotation( ) "The angle at the end of the palpebral fissure, the slit between the eyelids, close to the temporal region of the skull. [ISBN:0124020607, p.263][VHOG]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0000910") AnnotationAssertion( "EHDAA:9039") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37458") AnnotationAssertion( "FMA:59315") AnnotationAssertion( "MA:0001264") AnnotationAssertion( "NCIT:C49597") AnnotationAssertion(Annotation( "ncithesaurus:Outer_Canthus") "UMLS:C1711189") AnnotationAssertion( "VHOG:0001571") AnnotationAssertion(Annotation( "FMA:59321") "lateral canthus of eye") AnnotationAssertion(Annotation( "FMA:59315") "lateral palpebral commissure") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:59321") "lateral angle of eye") AnnotationAssertion(Annotation( "MA:0001264") "lateral canthus") AnnotationAssertion(Annotation( ) "outer canthi") AnnotationAssertion( "temporal canthus") AnnotationAssertion( "UBERON:0006726") AnnotationAssertion(rdfs:comment "see also FMA:59321") AnnotationAssertion(rdfs:label "outer canthus") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (liver left lateral lobe) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37644") AnnotationAssertion( "FMA:14501") AnnotationAssertion( "MA:0001641") AnnotationAssertion(Annotation( "FMA:14501") "lateral segment of left lobe of liver") AnnotationAssertion(Annotation( "FMA:14501") "lateral segment of liver") AnnotationAssertion(Annotation( "FMA:14501") "segmentum laterale (lobus hepatis sinister)") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:14501") "classical left lobe of liver") AnnotationAssertion(Annotation( "FMA:14501") "left lobe of liver (classical)") AnnotationAssertion( "UBERON:0006727") AnnotationAssertion(rdfs:label "liver left lateral lobe") SubClassOf( ) DisjointClasses(Annotation( "lexical"^^xsd:string) ) # Class: (liver left medial lobe) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37645") AnnotationAssertion( "FMA:14500") AnnotationAssertion( "MA:0001642") AnnotationAssertion(Annotation( "FMA:14500") "medial segment of left lobe of liver") AnnotationAssertion(Annotation( "FMA:14500") "medial segment of liver") AnnotationAssertion(Annotation( "FMA:14500") "segmentum mediale (lobus hepatis sinister)") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006728") AnnotationAssertion(rdfs:label "liver left medial lobe") SubClassOf( ) # Class: (liver perisinusoidal space) AnnotationAssertion(Annotation( "ISBN:0-683-40008-8"^^xsd:string) Annotation( "MP:0008988") "The extravascular space in the liver between the parenchymal cells and a sinusoid that contains the blood plasma.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:63162") AnnotationAssertion( "MA:0002497") AnnotationAssertion( "NCIT:C33309") AnnotationAssertion(Annotation( "ncithesaurus:Perisinusoidal_Space") "UMLS:C0227530") AnnotationAssertion(Annotation( "FMA:63162") "Disse's space") AnnotationAssertion(Annotation( "FMA:63162") "hepatic perisinusoidal space") AnnotationAssertion(Annotation( "FMA:63162") "perisinusoidal space of Disse") AnnotationAssertion(Annotation( "FMA:63162") "space of Disse") AnnotationAssertion(Annotation( ) Annotation( ) "spatium perisinusoideum") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "perisinusoidal space") AnnotationAssertion( "UBERON:0006729") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "liver perisinusoidal space") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (canthus) AnnotationAssertion(Annotation( ) "A canthus is a corner of the eye where the upper and lower eyelids meet. The bicanthal plane is the transversal plane linking both canthi and defines the upper boundary of the midface.") AnnotationAssertion( "canthal") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37457") AnnotationAssertion( "FMA:59222") AnnotationAssertion(Annotation( "FMA:59222") "palpebral commissure") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:59222") "angle of eye") AnnotationAssertion(Annotation( ) "bicanthal") AnnotationAssertion(Annotation( ) "bicanthal plane") AnnotationAssertion(Annotation( ) Annotation( ) "canthi") AnnotationAssertion(Annotation( ) "canthoplasty") AnnotationAssertion(Annotation( ) "canthorum") AnnotationAssertion(Annotation( ) "canthus (anatomy)") AnnotationAssertion(Annotation( "FMA:59222") "canthus of eye") AnnotationAssertion( "UBERON:0006742") AnnotationAssertion(rdfs:label "canthus") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/a/a9/Gray892.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (paleodentate of dentate nucleus) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:PDt") AnnotationAssertion( "BIRNLEX:1490") AnnotationAssertion( "FMA:72540") AnnotationAssertion(Annotation( "BIRNLEX:1490") "UMLS:C0175486") AnnotationAssertion(Annotation( "BIRNLEX:1490") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=685") AnnotationAssertion(Annotation( "BIRNLEX:1490") "PDT") AnnotationAssertion(Annotation( "BIRNLEX:1490") "paleodentate of dentate nucleus") AnnotationAssertion(Annotation( "FMA:72540") "paleodentate part of dentate nucleus") AnnotationAssertion(Annotation( "FMA:72540") "paleodentate portion of dentate nucleus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:685") "paleodentate part of the dentate nucleus") AnnotationAssertion(Annotation( "NeuroNames:685") Annotation( ) "pars paleodentata") AnnotationAssertion( "UBERON:0006743") AnnotationAssertion(rdfs:label "paleodentate of dentate nucleus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (superior parathyroid gland) AnnotationAssertion( ) AnnotationAssertion( "Mammals typically have four parathyroids, while other groups typically have six") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0001954") AnnotationAssertion( "EHDAA:3870") AnnotationAssertion( "EHDAA:9135") AnnotationAssertion( "FMA:55558") AnnotationAssertion( "NCIT:C33691") AnnotationAssertion(Annotation( "ncithesaurus:Superior_Parathyroid_Gland") "UMLS:C0447651") AnnotationAssertion(Annotation( ) "parathyroid 4") AnnotationAssertion(Annotation( ) "parathyroid IV") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006749") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "superior parathyroid gland") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "FMA-abduced-lr"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (inferior parathyroid gland) AnnotationAssertion( "Mammals typically have four parathyroids, while other groups typically have six") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0000821") AnnotationAssertion( "EHDAA:3864") AnnotationAssertion( "EHDAA:9127") AnnotationAssertion( "FMA:55559") AnnotationAssertion( "NCIT:C32787") AnnotationAssertion(Annotation( "ncithesaurus:Inferior_Parathyroid_Gland") "UMLS:C0447650") AnnotationAssertion(Annotation( "EHDAA2:0000821") "inferior parathyroid") AnnotationAssertion(Annotation( ) "parathyroid 3") AnnotationAssertion(Annotation( ) "parathyroid III") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006755") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "inferior parathyroid gland") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "FMA-abduced-lr"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "epithelium") Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (median lingual swelling) AnnotationAssertion(Annotation( ) "During the third week of embryological development there appears, immediately behind the ventral ends of the two halves of the mandibular arch, a rounded swelling named the tuberculum impar, which was described by His as undergoing enlargement to form the buccal part of the tongue. More recent researches, however, show that this part of the tongue is mainly, if not entirely, developed from a pair of lateral swellings which rise from the inner surface of the mandibular arch and meet in the middle line. The site of their meeting remains post-embryonically as the median sulcus of the tongue. The tuberculum impar is said to form the central part of the tongue immediately in front of the foramen cecum, but Hammar insists that it is purely a transitory structure and forms no part of the adult tongue[WP, Gray's].") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000730") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( ) "Most adult amphibians have a tongue, as do all known reptiles, birds and mammals. Thus it is likely that the tongue appeared with the establishment of tetrapods and this structure seems to be related, to some extant, to the terrestrial lifestyle.[well established][VHOG]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0001081") AnnotationAssertion( "EMAPA:17187") AnnotationAssertion( "FMA:312476") AnnotationAssertion( "VHOG:0000730") AnnotationAssertion(Annotation( "EHDAA2:0001081") "median lingual swelling") AnnotationAssertion(Annotation( ) "median tongue bud") AnnotationAssertion( "tuberculum impar") AnnotationAssertion(Annotation( ) "tuberculum linguale mediale") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006756") AnnotationAssertion(rdfs:comment "The thyroid initially develops caudal to the tuberculum impar . This embryonic swelling arises from the first pharyngeal arch and occurs midline on the floor of the developing pharynx, eventually helping form the tongue as the 2 lateral lingual swellings overgrow it. [http://emedicine.medscape.com/article/845125-overview]") AnnotationAssertion(rdfs:label "median lingual swelling") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/5/5c/Gray979.png"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lateral lingual swelling) AnnotationAssertion(Annotation( ) "During the third week there appears, immediately behind the ventral ends of the two halves of the mandibular arch, a rounded swelling named the tuberculum impar, which was described by His as undergoing enlargement to form the buccal part of the tongue. More recent researches, however, show that this part of the tongue is mainly, if not entirely, developed from a pair of lateral swellings (or distal tongue bud) which rise from the inner surface of the mandibular arch and meet in the middle line.") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000731") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "DOI:10.1046/j.1469-7580.2002.00073.x Iwasaki S, Evolution of the structure and function of the vertebrate tongue. J Anat (2002)") "Most adult amphibians have a tongue, as do all known reptiles, birds and mammals. Thus it is likely that the tongue appeared with the establishment of tetrapods and this structure seems to be related, to some extant, to the terrestrial lifestyle.[well established][VHOG]") AnnotationAssertion( "paired") AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0000911") AnnotationAssertion( "EMAPA:17189") AnnotationAssertion( "FMA:313628") AnnotationAssertion( "VHOG:0000731") AnnotationAssertion( "uberon") AnnotationAssertion( "lateral lingual prominence") AnnotationAssertion(Annotation( ) "lateral swellings") AnnotationAssertion(Annotation( ) "tuberculum laterale") AnnotationAssertion(Annotation( ) Annotation( ) "tuberculum linguale laterale") AnnotationAssertion( "UBERON:0006757") AnnotationAssertion(rdfs:label "lateral lingual swelling") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/5/5c/Gray979.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (corneo-scleral junction) AnnotationAssertion(Annotation( "MP:0013477") "The edge of the cornea where it joins the sclera; the limbus is a common site for the occurrence of corneal epithelial neoplasm.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EFO:0001403") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37835") AnnotationAssertion( "FMA:58342") AnnotationAssertion( "GAID:896") AnnotationAssertion( "MESH:D016850") AnnotationAssertion( "ZFA:0005570") AnnotationAssertion( "cornea limbus") AnnotationAssertion(Annotation( "FMA:58342") "corneal limbus") AnnotationAssertion(Annotation( "GAID:896") "corneal limbus") AnnotationAssertion(Annotation( ) "corneal-scleral limbus") AnnotationAssertion(Annotation( "GAID:896") "corneoscleral junction") AnnotationAssertion(Annotation( ) Annotation( ) "limbus corneae") AnnotationAssertion(Annotation( "FMA:58342") "sclerocorneal junction") AnnotationAssertion(Annotation( "GAID:896") "sclerocorneal limbus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "limbus corneae") AnnotationAssertion( "UBERON:0006761") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "This location has parts such as blood vessels etc. See PMC2868485, http://www.ncbi.nlm.nih.gov/pubmed/2695343") AnnotationAssertion(rdfs:label "corneo-scleral junction") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/3/3d/Limbus.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (suspensory ligament of lens) AnnotationAssertion(Annotation( ) "The zonule of Zinn (Zinn's membrane, ciliary zonule) is a ring of fibrous strands connecting the ciliary body with the crystalline lens of the eye. The zonule of Zinn is split into two layers: a thin layer, which lines the hyaloid fossa, and a thicker layer, which is a collection of zonular fibers. Together, the fibers are known as the suspensory ligament of the lens[WP]. Modified or toughened vitreous that suspend the lens at the equator to the non-pigmented epithelium of the ciliary zone. In zebrafish, dorsal zonules are thickened as compared to ventral zonules. In both dorsal and ventral regions, these fibers delimit the vitreous body aqueous humor boundary[ZFA].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:58838") AnnotationAssertion( "ZFA:0005573") AnnotationAssertion(Annotation( "FMA:58838") "Zinn's membrane") AnnotationAssertion(Annotation( "FMA:58838") "ciliary zonule") AnnotationAssertion(Annotation( "FMA:58838") "zonule of Zinn") AnnotationAssertion(Annotation( "ZFA:0005573") Annotation( ) "zonules") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "ciliary zonule") AnnotationAssertion(Annotation( ) "suspensory ligament of the lens") AnnotationAssertion(Annotation( ) "zonula") AnnotationAssertion(Annotation( ) "zonula ciliaris") AnnotationAssertion(Annotation( ) Annotation( ) "zonula ciliaris") AnnotationAssertion(Annotation( ) "zonular fiber") AnnotationAssertion(Annotation( ) "zonule") AnnotationAssertion( "UBERON:0006762") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "suspensory ligament of lens") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/1/1e/Schematic_diagram_of_the_human_eye_en.svg"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "Obol") ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "ZFA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (epithelium of conjunctiva) AnnotationAssertion(Annotation( ) "Layer of nonkeratinized squamous epithelium lining the conjunctiva, overlying scleral tissue.") AnnotationAssertion( ) AnnotationAssertion( "BTO:0005131") AnnotationAssertion( "EFO:0001916") AnnotationAssertion( "FMA:62131") AnnotationAssertion( "NCIT:C32365") AnnotationAssertion(Annotation( "ncithesaurus:Conjunctival_Epithelium") "UMLS:C1179037") AnnotationAssertion(Annotation( "FMA:62131") "conjunctiva epithelium") AnnotationAssertion(Annotation( "BTO:0005131") "conjunctival epithelium") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006763") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "epithelium of conjunctiva") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ) SubClassOf(Annotation( "BTO"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (anterior communicating artery) AnnotationAssertion(Annotation( ) "A blood vessel of the brain that connects the left and right anterior cerebral arteries. The anterior communicating artery connects the two anterior cerebral arteries across the commencement of the longitudinal fissure. Sometimes this vessel is wanting, the two arteries joining together to form a single trunk, which afterward divides; or it may be wholly, or partially, divided into two. Its length averages about 4 mm, but varies greatly. It gives off some of the anteromedial ganglionic vessels, but these are principally derived from the anterior cerebral artery. It is part of the cerebral arterial circle, also known as the circle of Willis.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0000586") AnnotationAssertion( "EMAPA:18599") AnnotationAssertion( "FMA:50169") AnnotationAssertion( "NCIT:C32087") AnnotationAssertion(Annotation( "ncithesaurus:Anterior_Communicating_Artery") "UMLS:C0149562") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "arteria communicans anterior") AnnotationAssertion( "UBERON:0006764") AnnotationAssertion(rdfs:label "anterior communicating artery") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/2/2e/Circle_of_Willis_en.svg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) # Class: (right anterior vena cava) AnnotationAssertion(Annotation( "FMA:4720") "Trunk of systemic vein which is formed by the union of the right and left brachiocephalic veins and terminates in the right atrium[FMA:4720].") AnnotationAssertion( "The mouse has both left and right anterior vena cava. adult humans only have a right.") AnnotationAssertion( "EMAPA:18419") AnnotationAssertion( "FMA:4720") AnnotationAssertion(Annotation( "EMAPA:18419") "right superior vena cava") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006766") AnnotationAssertion(rdfs:label "right anterior vena cava") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (head of femur) AnnotationAssertion(Annotation( ) Annotation( "MESH:A02.835.232.500.247.343") "The hemispheric articular surface at the upper extremity of the thigh bone[Stedman, 26th ed]. The femur head is the highest part of the thigh bone. It is supported by the neck of the femur. The head is globular and forms rather more than a hemisphere, is directed upward, medialward, and a little forward, the greater part of its convexity being above and in front. Its surface is smooth, coated with cartilage in the fresh state, except over an ovoid depression, the fovea capitis femoris, which is situated a little below and behind the center of the head, and gives attachment to the ligament of head of femur. If there is a fracture of the neck of the femur, the blood supply through the ligament becomes crucial. In orthopedic surgery, the head of the femur is important because it can undergo avascular necrosis and consequent osteochondritis dissecans. The head is removed in total hip replacement surgery [WP].") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0000892") Annotation( "AAO"^^xsd:string) Annotation( "AAO:LAP"^^xsd:string) "Proximal head of the femur, which articulates with the acetabulum.[AAO]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0000892") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37541") AnnotationAssertion( "FMA:32851") AnnotationAssertion( "MA:0003050") AnnotationAssertion( "MESH:A02.835.232.500.247.343") AnnotationAssertion( "NCIT:C32718") AnnotationAssertion(Annotation( "ncithesaurus:Head_of_the_Femur") "UMLS:C0015813") AnnotationAssertion( "galen:FemoralHead") AnnotationAssertion(Annotation( "AAO:0000892") "acetabular head") AnnotationAssertion(Annotation( "FMA:32851") "femoral head") AnnotationAssertion(Annotation( "FMA:32851") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "kopf des Schenkelbeins") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "capital femoral epiphysis") AnnotationAssertion(Annotation( ) Annotation( "AAO:0000892") "caput femoris") AnnotationAssertion(Annotation( ) Annotation( ) "caput femoris") AnnotationAssertion(Annotation( "MESH:A02.835.232.500.247.343") "femur head") AnnotationAssertion( "UBERON:0006767") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "head of femur") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/9/97/Gray243.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (epiphyseal line) AnnotationAssertion( ) AnnotationAssertion( "FMA:9918") AnnotationAssertion(Annotation( "FMA:9918") "epiphysial junction") AnnotationAssertion(Annotation( "FMA:9918") "line of bony union") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006768") AnnotationAssertion(rdfs:label "epiphyseal line") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (apophysis) AnnotationAssertion( ) AnnotationAssertion( "FMA:75428") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006770") AnnotationAssertion(rdfs:label "apophysis") SubClassOf( ) # Class: (long bone epiphyseal plate proliferative zone) AnnotationAssertion(Annotation( "MP:0003662") "Germinal layer of the epiphyseal plate where cells are actively dividing as well as producing extracellular matrix[MP].") AnnotationAssertion( "EMAPA:35507") AnnotationAssertion( "MA:0002976") AnnotationAssertion( "epiphyseal plate proliferative zone") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "MA:0002976") "zone of proliferation") AnnotationAssertion( "UBERON:0006771") AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "In this zone, chondrocytes undergo rapid mitosis, forming distinctive looking stacks[WP]") AnnotationAssertion(rdfs:label "long bone epiphyseal plate proliferative zone") SubClassOf( ) # Class: (long bone epiphyseal plate hypertrophic zone) AnnotationAssertion(Annotation( ) Annotation( "MP:0000165") "The layer of the epiphyseal plate of a long bone where chondrocytes mature and enlarge[MP].") AnnotationAssertion(Annotation( "MA"^^xsd:string) "there is also MA:0002849 ! hypertrophic cartilage zone") AnnotationAssertion( "EMAPA:35506") AnnotationAssertion( "MA:0002977") AnnotationAssertion( "epiphyseal plate hypertrophic zone") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "MP:0000165") "hypertrophic chondrocyte zone") AnnotationAssertion(Annotation( "MP:0000165") "long bone hypertrophic chondrocyte zone") AnnotationAssertion(Annotation( "MA:0002977") "maturation zone") AnnotationAssertion(Annotation( "MA:0002977") "zone of hypertrophic chondrocytes") AnnotationAssertion( "UBERON:0006772") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "long bone epiphyseal plate hypertrophic zone") SubClassOf( ) # Class: (long bone epiphyseal plate ossification zone) AnnotationAssertion(Annotation( "MP:0006399") "Layer of the epiphyseal plate where new bone matrix is deposited[MP].") AnnotationAssertion( "epiphyseal plate ossification zone") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006773") AnnotationAssertion(rdfs:label "long bone epiphyseal plate ossification zone") SubClassOf( ) # Class: (zone of epiphyseal plate) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006775") AnnotationAssertion(rdfs:label "zone of epiphyseal plate") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (annular epiphysis) AnnotationAssertion(Annotation( ) "Secondary growth centers occurring as rings at the periphery of the superior and inferior surfaces of the vertebral body.") AnnotationAssertion( "here epiphysis means deriving from a separate ossification center") AnnotationAssertion( "FMA:75792") AnnotationAssertion(Annotation( "FMA:75792") "anular epiphysis") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006776") AnnotationAssertion(rdfs:label "annular epiphysis") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (tectal plate) AnnotationAssertion(Annotation( ) "Embryologic structure that is formed by two longitudinal eminences, one on each alar plate of the midbrain. These eminences become the superior colliculus and inferior colliculus ( Carpenter-1983 )].") AnnotationAssertion( ) AnnotationAssertion( "FMA:77488") AnnotationAssertion(Annotation( "FMA:77488") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "lamina quadrigemina") AnnotationAssertion(Annotation( "FMA:77488") "quadrigeminal plate") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006777") AnnotationAssertion(rdfs:comment "The term \"tectal plate\" (or \"quadrigeminal plate\") is used to describe the junction of the gray and white matter in the embryo. (NeuroNames ancil-453)") AnnotationAssertion(rdfs:label "tectal plate") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (superficial white layer of superior colliculus) AnnotationAssertion(Annotation( ) "Superficial white matter layer of superior collilculus that consists mainly of axions from the optic nerve.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:SCop") AnnotationAssertion( "BAMS:SuWh") AnnotationAssertion( "BAMS:op") AnnotationAssertion( "DHBA:12296") AnnotationAssertion( "FMA:71112") AnnotationAssertion( "HBA:9122") AnnotationAssertion( "MBA:851") AnnotationAssertion(Annotation( ) "lamina III of superior colliculus") AnnotationAssertion(Annotation( "FMA:71112") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "lamina colliculi superioris iii") AnnotationAssertion(Annotation( "FMA:71112") "layer III of superior colliculus") AnnotationAssertion(Annotation( "FMA:71112") "optic layer") AnnotationAssertion(Annotation( "FMA:71112") "optic layer of superior colliculus") AnnotationAssertion(Annotation( "FMA:71112") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "stratum opticum colliculi superioris") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BAMS:op") "optic layer of the superior colliculus") AnnotationAssertion(Annotation( "BAMS:SCop") "superior colliculus optic layer") AnnotationAssertion( "UBERON:0006779") AnnotationAssertion(rdfs:label "superficial white layer of superior colliculus") SubClassOf( ) SubClassOf( ) # Class: (zonal layer of superior colliculus) AnnotationAssertion(Annotation( ) "A thin layer consisting of small myelinated axons together with marginal and horizontal cells.") AnnotationAssertion( "we follow FMA is making this gray matter, but this needs to be reconciled with the WP-derived definition") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:SCzo") AnnotationAssertion( "BAMS:Zo") AnnotationAssertion( "BAMS:zo") AnnotationAssertion( "DHBA:12297") AnnotationAssertion( "FMA:72406") AnnotationAssertion( "MBA:834") AnnotationAssertion(Annotation( ) "lamina I of superior colliculus") AnnotationAssertion(Annotation( "FMA:72406") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "lamina colliculi superioris I") AnnotationAssertion(Annotation( "FMA:72406") "layer I of superior colliculus") AnnotationAssertion(Annotation( "FMA:72406") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "stratum zonale colliculi superioris") AnnotationAssertion(Annotation( "FMA:72406") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "stratum zonale of midbrain") AnnotationAssertion(Annotation( "FMA:72406") "stratum zonale of superior colliculus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BAMS:SCzo") "superior colliculus zonal layer") AnnotationAssertion(Annotation( "BAMS:Zo") Annotation( "BAMS:zo") "zonal layer of the superior colliculus") AnnotationAssertion( "UBERON:0006780") AnnotationAssertion(rdfs:label "zonal layer of superior colliculus") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ) # Class: (stratum lemnisci of superior colliculus) AnnotationAssertion(Annotation( "NLX:144110") "Composite layer of the superior colliculus lying deep to the stratum opticum, that can be further subdivided into fiber and cell rich layers (Brodal, Neurological Anatomy, 2nd ed., 1981, pg 544).") AnnotationAssertion(Annotation( "NLX:144110") "stratum lemnisci") AnnotationAssertion( "BAMS:StL") AnnotationAssertion( "FMA:72408") AnnotationAssertion( "HBA:9116") AnnotationAssertion( "NLX:144110") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006782") AnnotationAssertion(rdfs:label "stratum lemnisci of superior colliculus") SubClassOf( ) # Class: (layer of superior colliculus) AnnotationAssertion(Annotation( ) "The microstructure of the optic tectum / superior colliculus varies across species. As a general rule, there is always a clear distinction between superficial layers, which receive input primarily from the visual system and show primarily visual responses, and deeper layers, which receive many types of input and project to numerous motor-related brain areas. The distinction between these two zones is so clear and consistent that some anatomists have suggested that they should be considered separate brain structures. In mammals, neuroanatomists conventionally identify seven layers[WP].") AnnotationAssertion( "The tectum in lampreys has more layers than the tectum in hagfishes, likely related to the fact that vision is less well developed in hagfishes. tectal lamination is almost identical in reptiles and birds and is more restricted in mammals[http://icb.oxfordjournals.org/content/42/4/743.full]") AnnotationAssertion( ) AnnotationAssertion( "BAMS:SC-layers") AnnotationAssertion( "NLXANAT:1005033") AnnotationAssertion(Annotation( "NLXANAT:1005033") "cytoarchitectural part of superior colliculus") AnnotationAssertion(Annotation( ) "layer of optic tectum") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "tectal layer") AnnotationAssertion( "UBERON:0006783") AnnotationAssertion(rdfs:label "layer of superior colliculus") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (gray matter layer of superior colliculus) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A central nervous system gray matter layer that is part of a superior colliculus.") AnnotationAssertion( "FMA:77870") AnnotationAssertion( "gray matter of superior colliculus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006785") AnnotationAssertion(rdfs:label "gray matter layer of superior colliculus") SubClassOf( ) SubClassOf( ) # Class: (white matter of superior colliculus) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A central nervous system white matter layer that is part of a superior colliculus.") AnnotationAssertion( "BIRNLEX:1023") AnnotationAssertion( "FMA:83899") AnnotationAssertion(Annotation( "BIRNLEX:1023") "predominantly white regional part of superior colliculus") AnnotationAssertion(Annotation( "FMA:83899") "white matter layer of superior colliculus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006786") AnnotationAssertion(rdfs:label "white matter of superior colliculus") SubClassOf( ) SubClassOf( ) # Class: (middle white layer of superior colliculus) AnnotationAssertion( "grouping teleost assuming homology of superior colliculus and optic tectum; however, this is dubious as tectal layers vary so widely. See: http://icb.oxfordjournals.org/content/42/4/743/T1.expansion.html") AnnotationAssertion( ) AnnotationAssertion( "BAMS:InWh") AnnotationAssertion( "BAMS:MWh") AnnotationAssertion( "BAMS:SCiw") AnnotationAssertion( "BAMS:iw") AnnotationAssertion( "DHBA:12300") AnnotationAssertion( "FMA:71113") AnnotationAssertion( "HBA:9120") AnnotationAssertion( "TAO:0001351") AnnotationAssertion( "ZFA:0001351") AnnotationAssertion(Annotation( "FMA:71113") "intermediate white layer") AnnotationAssertion(Annotation( "FMA:71113") "intermediate white layer of superior colliculus") AnnotationAssertion(Annotation( ) "lamina V of superior colliculus") AnnotationAssertion(Annotation( "FMA:71113") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "lamina colliculi superioris v") AnnotationAssertion(Annotation( "FMA:71113") "layer V of superior colliculus") AnnotationAssertion(Annotation( ) "stratum album intermediale of superior colliculus") AnnotationAssertion(Annotation( "FMA:71113") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "stratum medullare intermedium colliculi superioris") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BAMS:InWh") "intermediate white layer of the superior colliculus") AnnotationAssertion(Annotation( "BAMS:iw") "intermediate white layer of the superior colliculus") AnnotationAssertion(Annotation( "ZFA:0001351") Annotation( ) "strata album centrales") AnnotationAssertion(Annotation( "TAO:0001351") "stratum album centrale") AnnotationAssertion(Annotation( "BAMS:SCiw") "superior colliculus intermediate white layer") AnnotationAssertion( "UBERON:0006787") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "middle white layer of superior colliculus") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (middle gray layer of superior colliculus) AnnotationAssertion( "grouping teleost assuming homology of superior colliculus and optic tectum; however, this is dubious as tectal layers vary so widely. See: http://icb.oxfordjournals.org/content/42/4/743/T1.expansion.html") AnnotationAssertion( ) AnnotationAssertion( "BAMS:MGr") AnnotationAssertion( "BAMS:igr") AnnotationAssertion( "DHBA:12299") AnnotationAssertion( "FMA:72409") AnnotationAssertion( "HBA:9119") AnnotationAssertion( "TAO:0001350") AnnotationAssertion( "ZFA:0001350") AnnotationAssertion(Annotation( "FMA:72409") "intermediate gray layer") AnnotationAssertion(Annotation( "FMA:72409") "intermediate grey layer of superior colliculus") AnnotationAssertion(Annotation( ) "lamina IV of superior colliculus") AnnotationAssertion(Annotation( "FMA:72409") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "lamina colliculi superioris iv") AnnotationAssertion(Annotation( "FMA:72409") "layer IV of superior colliculus") AnnotationAssertion(Annotation( "FMA:72409") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "stratum griseum intermediale") AnnotationAssertion(Annotation( ) "stratum griseum intermediale of superior colliculus") AnnotationAssertion(Annotation( "FMA:72409") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "stratum griseum intermedium colliculi superioris") AnnotationAssertion(Annotation( "FMA:72409") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "stratum griseum mediale") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BAMS:igr") "intermediate grey layer of the superior colliculus") AnnotationAssertion(Annotation( "TAO:0001350") "stratum griseum centrale") AnnotationAssertion( "UBERON:0006788") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "middle gray layer of superior colliculus") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (deep gray layer of superior colliculus) AnnotationAssertion( ) AnnotationAssertion( "BAMS:DpG") AnnotationAssertion( "BAMS:SCdg") AnnotationAssertion( "BAMS:dgr") AnnotationAssertion( "DHBA:12302") AnnotationAssertion( "FMA:72410") AnnotationAssertion( "HBA:9117") AnnotationAssertion(Annotation( "FMA:72410") "deep grey layer of superior colliculus") AnnotationAssertion(Annotation( ) "lamina VI of superior colliculus") AnnotationAssertion(Annotation( "FMA:72410") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "lamina colliculi superioris vi") AnnotationAssertion(Annotation( "FMA:72410") "layer VI of superior colliculus") AnnotationAssertion(Annotation( "FMA:72410") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "stratum griseum profundum") AnnotationAssertion(Annotation( "FMA:72410") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "stratum griseum profundum colliculi superioris") AnnotationAssertion(Annotation( ) "stratum griseum profundum of superior colliculus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BAMS:DpG") "deep gray layer of the superior colliculus") AnnotationAssertion(Annotation( "BAMS:dgr") "deep grey layer of the superior colliculus") AnnotationAssertion(Annotation( "BAMS:SCdg") "superior colliculus deep gray layer") AnnotationAssertion(Annotation( "BAMS:SCdg") "superior colliculus intermediate deep gray layer") AnnotationAssertion( "UBERON:0006789") AnnotationAssertion(rdfs:label "deep gray layer of superior colliculus") SubClassOf( ) SubClassOf( ) # Class: (deep white layer of superior colliculus) AnnotationAssertion(Annotation( ) "Deep white matter layer of superior collilculus that consists entirely of fibers.") AnnotationAssertion( "grouping teleost assuming homology of superior colliculus and optic tectum; however, this is dubious as tectal layers vary so widely. See: http://icb.oxfordjournals.org/content/42/4/743/T1.expansion.html") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:DpWh") AnnotationAssertion( "BAMS:SCdw") AnnotationAssertion( "BAMS:dw") AnnotationAssertion( "DHBA:12303") AnnotationAssertion( "FMA:72416") AnnotationAssertion( "HBA:9118") AnnotationAssertion( "TAO:0000494") AnnotationAssertion( "ZFA:0000494") AnnotationAssertion(Annotation( ) "lamina VII of superior colliculus") AnnotationAssertion(Annotation( "FMA:72416") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "lamina colliculi superioris vii") AnnotationAssertion(Annotation( "FMA:72416") "layer VII of superior colliculus") AnnotationAssertion(Annotation( "FMA:72416") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "stratum album profundum") AnnotationAssertion(Annotation( ) "stratum album profundum of superior colliculus") AnnotationAssertion(Annotation( "FMA:72416") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "stratum medullare profundum colliculi superioris") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BAMS:DpWh") "deep white layer of the superior colliculus") AnnotationAssertion(Annotation( "BAMS:dw") "deep white layer of the superior colliculus") AnnotationAssertion(Annotation( "TAO:0000494") "deep white zone") AnnotationAssertion(Annotation( "ZFA:0000494") Annotation( ) "deep white zones") AnnotationAssertion(Annotation( "BAMS:SCdw") "superior colliculus deep white layer") AnnotationAssertion(Annotation( "BAMS:SCdw") "superior colliculus intermediate deep white layer") AnnotationAssertion( "UBERON:0006790") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "deep white layer of superior colliculus") SubClassOf( ) SubClassOf( ) # Class: (superficial layer of superior colliculus) AnnotationAssertion(Annotation( ) "The outermost layer of the superior colliculus.") AnnotationAssertion( "grouping teleost assuming homology of superior colliculus and optic tectum; however, this is dubious as tectal layers vary so widely. See: http://icb.oxfordjournals.org/content/42/4/743/T1.expansion.html") AnnotationAssertion( "BM:MB-Tec-SCS") AnnotationAssertion( "DHBA:12293") AnnotationAssertion( "TAO:0000686") AnnotationAssertion( "ZFA:0000686") AnnotationAssertion(Annotation( "ZFA:0000686") "superficial gray and white zone") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "TAO:0000686") "superficial grey and white zone") AnnotationAssertion(Annotation( "TAO:0000686") Annotation( ) "superficial grey and white zones") AnnotationAssertion(Annotation( "BAMS:SCS") "superior colliculus, superficial layer") AnnotationAssertion( "UBERON:0006791") AnnotationAssertion(rdfs:label "superficial layer of superior colliculus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (intermediate layer of superior colliculus) AnnotationAssertion(Annotation( ) "A layer of superior colliculus that lies between the superficial layer and the deep layer.") AnnotationAssertion( "grouping teleost assuming homology of superior colliculus and optic tectum; however, this is dubious as tectal layers vary so widely. See: http://icb.oxfordjournals.org/content/42/4/743/T1.expansion.html") AnnotationAssertion( "BAMS:SCI") AnnotationAssertion( "BM:MB-Tec-SCI") AnnotationAssertion( "DHBA:12298") AnnotationAssertion( "TAO:0000327") AnnotationAssertion( "ZFA:0000327") AnnotationAssertion(Annotation( "ZFA:0000327") "central zone of the optic tectum") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "TAO:0000327") "central zone") AnnotationAssertion( "superior colliculus, central layer") AnnotationAssertion(Annotation( "BAMS:SCI") "superior colliculus, intermediate layer") AnnotationAssertion( "UBERON:0006792") AnnotationAssertion(rdfs:label "intermediate layer of superior colliculus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (deep layer of superior colliculus) AnnotationAssertion(Annotation( ) "The innermost layer of the superior colliculus.") AnnotationAssertion( "grouping teleost assuming homology of superior colliculus and optic tectum; however, this is dubious as tectal layers vary so widely. See: http://icb.oxfordjournals.org/content/42/4/743/T1.expansion.html") AnnotationAssertion( "BAMS:SCD") AnnotationAssertion( "BM:MB-Tec-SCD") AnnotationAssertion( "DHBA:12301") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BAMS:SCD") "superior colliculus, deep layer") AnnotationAssertion( "UBERON:0006793") AnnotationAssertion(rdfs:label "deep layer of superior colliculus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (visual processing part of nervous system) AnnotationAssertion( "GAID:1233") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "GAID:1233") "optic lobe") AnnotationAssertion( "UBERON:0006794") AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "This grouping class is primarily to accommodate GO") AnnotationAssertion(rdfs:label "visual processing part of nervous system") SubClassOf(Annotation( "cjm"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (cephalopod optic lobe) AnnotationAssertion(Annotation( ) "Large lobes of the brain associated with the eyes. In octopods and some squids the optic lobes may be separated from the rest of the brain by an optic stalk of varying length. In Octopus the optic lobes contain 92 million cells compared with only 42 million in the main central mass of the brain (J. Young, 1963) .") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "optic lobe") AnnotationAssertion( "UBERON:0006796") AnnotationAssertion(rdfs:label "cephalopod optic lobe") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (efferent nerve) AnnotationAssertion(Annotation( "UBERON:cjm"^^xsd:string) "A nerve that transmits nerve impulses from the central nervous system to effectors such as muscles or glands.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AEO:0000202") AnnotationAssertion( "EHDAA2:0003231") AnnotationAssertion( "FMA:5867") AnnotationAssertion(Annotation( ) "nervus efferente") AnnotationAssertion( "uberon") AnnotationAssertion( "motor nerve") AnnotationAssertion(Annotation( "FMA:5867") Annotation( ) "nervus motorius") AnnotationAssertion(Annotation( ) "neurofibrae efferentes") AnnotationAssertion( "UBERON:0006798") AnnotationAssertion(rdfs:label "efferent nerve") SubClassOf( ) SubClassOf(Annotation( "AEO"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (glandular epithelium) AnnotationAssertion(Annotation( ) "An epithelium that is composed primarily of secretory cells.") AnnotationAssertion( "consider splitting epithelium from epithelial tissue") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0002991") AnnotationAssertion( "NCIT:C43370") AnnotationAssertion( "NCIT:C45715") AnnotationAssertion(Annotation( "ncithesaurus:Glandular_Epithelium") "UMLS:C0682578") AnnotationAssertion(Annotation( "ncithesaurus:Glandular_Epithelial_Tissue") "UMLS:C1708242") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006799") AnnotationAssertion(rdfs:label "glandular epithelium") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses( ) # Class: (anatomical line) AnnotationAssertion(Annotation( ) "Non-material anatomical entity of one dimension, which forms a boundary of an anatomical surface or is a modulation of an anatomical surface.") AnnotationAssertion( "AAO:0010267") AnnotationAssertion( "AEO:0000008") AnnotationAssertion( "BILA:0000008") AnnotationAssertion( "CARO:0000008") AnnotationAssertion( "EHDAA2:0003008") AnnotationAssertion( "FMA:9657") AnnotationAssertion( "HAO:0000008") AnnotationAssertion( "TAO:0001837") AnnotationAssertion( "TGMA:0001828") AnnotationAssertion( "XAO:0004003") AnnotationAssertion( "ZFA:0001689") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006800") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "anatomical line") SubClassOf( ) # Class: (proximal head of humerus) AnnotationAssertion(Annotation( ) "Hemispherical structure on proximal epiphysis of humerus that articulates with glenoid cavity[WP,modified].") AnnotationAssertion(Annotation( "AAO:0000835") Annotation( "AAO"^^xsd:string) Annotation( "AAO:LAP"^^xsd:string) "Hemispherical ball on the proximal end of the humerus that fits into the glenoid cavity of the pectoral girdle to form the shoulder joint[AAO].") AnnotationAssertion( "UBERON:3000835") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0000835") AnnotationAssertion( "EMAPA:25050") AnnotationAssertion( "FMA:13304") AnnotationAssertion( "NCIT:C32720") AnnotationAssertion(Annotation( "ncithesaurus:Head_of_the_Humerus") "UMLS:C0223683") AnnotationAssertion( "galen:HeadOfHumerus") AnnotationAssertion(Annotation( "FMA:13304") "head of humerus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( "AAO:0000835") "caput humeri") AnnotationAssertion(Annotation( "FMA:13304") Annotation( "PHENOSCAPE:curators"^^xsd:string) "humeral head") AnnotationAssertion( "UBERON:0006801") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "proximal head of humerus") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) SubClassOf( ObjectSomeValuesFrom( )) # Class: (acetabular rim) AnnotationAssertion(Annotation( ) "A prominent unever rim that bounds the acetabulum, serving as the attachment for the acetabular labrum, which reduces its opening, and deepens the surface for formation of the hip joint.") AnnotationAssertion( "FMA:16941") AnnotationAssertion( "uberon") AnnotationAssertion( "acetabular margin") AnnotationAssertion( "UBERON:0006802") AnnotationAssertion(rdfs:label "acetabular rim") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obturator foramen) AnnotationAssertion(Annotation( ) "The obturator foramen is the hole created by the ischium and pubis bones of the pelvis through which nerves and muscles pass.") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0000863") Annotation( "AAO"^^xsd:string) Annotation( "AAO:LAP"^^xsd:string) "Small opening for the passage of the obturatorius nerve that perforates the pubis.[AAO]") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0000863") Annotation( "AAO"^^xsd:string) "relationship loss: subclass pelvic girdle opening (AAO:0000767)[AAO]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0000863") AnnotationAssertion( "FMA:16999") AnnotationAssertion( "NCIT:C75332") AnnotationAssertion(Annotation( "ncithesaurus:Obturator_Foramen") "UMLS:C0223670") AnnotationAssertion(Annotation( "FMA:16999") Annotation( ) "foramen obturatorium") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "foramen obturatum") AnnotationAssertion( "UBERON:0006803") AnnotationAssertion(rdfs:label "obturator foramen") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/f/ff/Skeletpelvis-pubis.jpg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "AAO"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (reticular tissue) AnnotationAssertion(Annotation( ) Annotation( "FMA:20116") "Loose connective tissue which consists of an irregular network of cells and reticular fibers and is spatially associated with myeloid and lymphoid cells. Examples: stroma of bone marrow, stroma of spleen, stroma of lymph node.[FMA].") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0000542") Annotation( "AAO"^^xsd:string) Annotation( "AAO:LAP"^^xsd:string) "Network of reticular fibres (fine collagen) that form a soft skeleton to support the lymphoid organs (lymph nodes, bone marrow, and spleen).[AAO]") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0000542") Annotation( "AAO"^^xsd:string) "relationship loss: subclass connective tissue proper (AAO:0000099)[AAO]") AnnotationAssertion(Annotation( "FMA"^^xsd:string) "in FMA this is asserted as part of smooth muscle tissue") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0000542") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37846") AnnotationAssertion( "FMA:20116") AnnotationAssertion(Annotation( "FMA:20116") "reticular connective tissue") AnnotationAssertion(Annotation( "FMA:20116") Annotation( ) "textus connectivus reticularis") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006804") AnnotationAssertion(rdfs:label "reticular tissue") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (sternal end of clavicle) AnnotationAssertion(Annotation( "AAO:0000812") "Medial end of the clavicle, which usually lies on the ventral side of the epicoracoid cartilage, just posterior to the epicoracoid bridge.") AnnotationAssertion( ) AnnotationAssertion( "AAO:0000812") AnnotationAssertion( "FMA:23297") AnnotationAssertion(Annotation( "FMA:23297") "extremitas sternalis (clavicula)") AnnotationAssertion(Annotation( "FMA:23297") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "extremitas sternalis claviculae") AnnotationAssertion(Annotation( "FMA:23297") "medial end of clavicle") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "AAO:0000812") "extremitas medialis") AnnotationAssertion(Annotation( "AAO:0000812") "medial end") AnnotationAssertion(Annotation( "FMA:23297") "proximal epyphysis of clavicle") AnnotationAssertion( "UBERON:0006805") AnnotationAssertion(rdfs:label "sternal end of clavicle") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (entepicondyle of humerus) AnnotationAssertion(Annotation( ) Annotation( "PHENOSCAPE:ad"^^xsd:string) "A bony projection on the distal epiphysis of the humerus that is the attachment site for the flexor muscles of the manus. This condyle faces posteriorly (for sprawling tetrapods) or medially (for erect tetrapods).") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0000782") Annotation( "AAO"^^xsd:string) Annotation( "AAO:LAP"^^xsd:string) "Rounded projection at the distal head of the humerus and medial to the humeral head, which serves as a place of attachment for the flexor muscles antogonistic to those that attach to the lateral epicondyle.[AAO]") AnnotationAssertion( "entepicondylar") AnnotationAssertion(Annotation( "AAO:0000782") "medial epicondyle") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0000782") AnnotationAssertion( "FMA:23441") AnnotationAssertion( "galen:MedialHumeralEpicondyle") AnnotationAssertion(Annotation( "PHENOSCAPE:pm") "entepicondyle") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "e. medialis humeri") AnnotationAssertion(Annotation( ) "elbow pit") AnnotationAssertion(Annotation( "FMA:23441") "epicondylus medialis (humerus)") AnnotationAssertion(Annotation( "AAO:0000782") "epicondylus medialis humeri") AnnotationAssertion(Annotation( "FMA:23441") Annotation( ) "medial epicondyle of humerus") AnnotationAssertion(Annotation( ) Annotation( ) "ventral epicondyle of humerus") AnnotationAssertion( "UBERON:0006806") AnnotationAssertion(rdfs:label "entepicondyle of humerus") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/6/6c/Gray329-Medial_epicondyle_of_the_humerus.png"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (ectepicondyle of humerus) AnnotationAssertion(Annotation( ) Annotation( ) Annotation( ) Annotation( "PHENOSCAPE:ad"^^xsd:string) "A bony projection on the distal epiphysis of the humerus that is the attachment site for the extensor muscles of the distal parts of the forelimb. In humans, this is known as the lateral epicondyle, but the position varies across tetrapods.") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0000758") Annotation( "AAO"^^xsd:string) Annotation( "AAO:LAP"^^xsd:string) "Rounded projection at the distal head of the humerus (larger and more prominent than the lateral epicondyle) and lateral to the humeral head, which serves as a place of attachment for the mm extensor antebrachii et carpi radialis, extensor digitorum communis, and in part to the m extensor antebrachii et carpi ulnaris.[AAO]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( ) "ectepicondyle") AnnotationAssertion(Annotation( "AAO:0000758") "lateral epicondyle") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0000758") AnnotationAssertion( "FMA:23442") AnnotationAssertion( "galen:LateralHumeralEpicondyle") AnnotationAssertion(Annotation( "FMA:23442") "epicondylus lateralis (humerus)") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( "NCBITaxon:8782"^^xsd:string) "dorsal epicondyle of humerus") AnnotationAssertion(Annotation( ) Annotation( ) "dorsal epicondyle of the humerus") AnnotationAssertion(Annotation( ) Annotation( ) "e. lateralis humeri") AnnotationAssertion(Annotation( "AAO:0000758") "epicondylus lateralis humeri") AnnotationAssertion(Annotation( "FMA:23442") Annotation( ) "lateral epicondyle of humerus") AnnotationAssertion( "UBERON:0006807") AnnotationAssertion(rdfs:label "ectepicondyle of humerus") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/c/c6/Gray420.png"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (obsolete supporting connective tissue) AnnotationAssertion( "AAO:0000571") AnnotationAssertion( "FMA:37374") AnnotationAssertion(Annotation( "FMA:37374") "specialized connective tissue") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006809") AnnotationAssertion(rdfs:comment "made obsolete because FMA:37374 is a General anatomical term rather than a true class in the FMA") AnnotationAssertion(rdfs:label "obsolete supporting connective tissue") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (olecranon) AnnotationAssertion(Annotation( ) "The olecranon is a large, thick, curved bony eminence of the forearm that projects behind the elbow. It is situated at the upper (proximal) end of the ulna, one of the two bones in the forearm. When the hand faces forward the olecranon faces towards the back (posteriorly). It is bent forward at the summit so as to present a prominent lip which is received into the olecranon fossa of the humerus in extension of the forearm. Its base is contracted where it joins the body and the narrowest part of the upper end of the ulna. Its posterior surface, directed backward, is triangular, smooth, subcutaneous, and covered by a bursa. Its superior surface is of quadrilateral form, marked behind by a rough impression for the insertion of the Triceps brachii; and in front, near the margin, by a slight transverse groove for the attachment of part of the posterior ligament of the elbow-joint. Its anterior surface is smooth, concave, and forms the upper part of the semilunar notch. Its borders present continuations of the groove on the margin of the superior surface; they serve for the attachment of ligaments, viz. , the back part of the ulnar collateral ligament medially, and the posterior ligament laterally. From the medial border a part of the Flexor carpi ulnaris arises; while to the lateral border the anconeus muscle is attached.") AnnotationAssertion( "check AAO") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0000843") Annotation( "AAO"^^xsd:string) Annotation( "AAO:LAP"^^xsd:string) "Large and thick process situated at the proximal (upper) end of the ulna. Its inner face forms the medial articular surface that articulates with the humeral head.[AAO]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0000843") AnnotationAssertion( "FMA:39795") AnnotationAssertion( "NCIT:C33200") AnnotationAssertion(Annotation( "ncithesaurus:Olecranon") "UMLS:C0223710") AnnotationAssertion(Annotation( ) "olecranon process of ulna") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "olecranon process") AnnotationAssertion(Annotation( "AAO:0000843") "ulnar process") AnnotationAssertion( "UBERON:0006810") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "olecranon") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/6/60/Gray212.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (occipital condyle) AnnotationAssertion(Annotation( ) Annotation( ) "The occipital condyles are undersurface facets of the occipital bone in vertebrates, which function in articulation with the superior facets of the atlas vertebra. The condyles are oval or reniform (kidney-shaped) in shape, and their anterior extremities, directed forward and medialward, are closer together than their posterior, and encroach on the basilar portion of the bone; the posterior extremities extend back to the level of the middle of the foramen magnum. The articular surfaces of the condyles are convex from before backward and from side to side, and look downward and lateralward. To their margins are attached the capsules of the atlantoC6ccipital articulations, and on the medial side of each is a rough impression or tubercle for the alar ligament. At the base of either condyle the bone is tunnelled by a short canal, the hypoglossal canal.") AnnotationAssertion( ) AnnotationAssertion( "AAO:0000330") AnnotationAssertion( "FMA:52861") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "condylus occipitalis") AnnotationAssertion(Annotation( ) "exoccipital condyle") AnnotationAssertion( "UBERON:0006811") AnnotationAssertion(rdfs:comment "birds have a single occipital condyle, mammals have two[WP]") AnnotationAssertion(rdfs:label "occipital condyle") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/8/88/Gray129.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (mental foramen) AnnotationAssertion(Annotation( ) "The mental foramen is one of two holes ('foramina') located on the anterior surface of the mandible. It permits passage of the mental nerve and vessels. The mental foramen descends slightly in edentulous individuals.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0000298") AnnotationAssertion( "FMA:53171") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) Annotation( ) "mental foramina") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "foramen mentale") AnnotationAssertion(Annotation( ) "foramen mentalis") AnnotationAssertion( "UBERON:0006812") AnnotationAssertion(rdfs:label "mental foramen") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/6/64/Gray176.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (nasal skeleton) AnnotationAssertion(Annotation( "AAO:0000320") "Structural framework that provides support to the nasal sacs and ducts.") AnnotationAssertion( ) AnnotationAssertion( "AAO:0000320") AnnotationAssertion( "FMA:60116") AnnotationAssertion(Annotation( "FMA:60116") "skeleton of nose") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006813") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "nasal skeleton") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "facial series") Annotation( "Kardong-abduced") ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (areolar connective tissue) AnnotationAssertion(Annotation( "FMA:63897") "Loose connective tissue located at the outer and inner layers of organs. Examples: submucosal connective tissue, tunica adventitia of artery, papillary dermis, superficial fascia of dorsum of hand.") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0000027") Annotation( "AAO"^^xsd:string) Annotation( "AAO:LAP"^^xsd:string) "Also known as loose connective tissue. A pliable, mesh-like tissue with a fluid matrix that functions to cushion and protect body organs.[AAO]") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0000027") Annotation( "AAO"^^xsd:string) "relationship loss: subclass connective tissue proper (AAO:0000099)[AAO]") AnnotationAssertion(Annotation( "AAO"^^xsd:string) "cushions body organs") AnnotationAssertion( ) AnnotationAssertion( "AAO:0000027") AnnotationAssertion( "FMA:63897") AnnotationAssertion(Annotation( "FMA:63897") "loose areolar connective tissue") AnnotationAssertion( "uberon") AnnotationAssertion( "areolar tissue") AnnotationAssertion(Annotation( "AAO:0000027") "loose connective tissue") AnnotationAssertion( "UBERON:0006815") AnnotationAssertion(rdfs:label "areolar connective tissue") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (body of sternum) AnnotationAssertion(Annotation( ) Annotation( "MP:0012512") "The middle and longest portion of the sternum, lying between the manubrium superiorly and the xiphoid process inferiorly; it considerably lengthier, narrower, and thinner than the manubrium, attains its greatest breadth close to the lower end.") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0000939") Annotation( "AAO"^^xsd:string) Annotation( "AAO:LAP"^^xsd:string) "Proximal portion of the sternum, usually elaborated into a stylum that may be ossified.[AAO]") AnnotationAssertion(Annotation( "AAO"^^xsd:string) "AAO defines as 'Proximal portion of the sternum, usually elaborated into a stylum that may be ossified' [AAO:0000939]") AnnotationAssertion( "gladiolus") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0000939") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37443") AnnotationAssertion( "FMA:7487") AnnotationAssertion(Annotation( "FMA:7487") "gladiolus of sternum") AnnotationAssertion(Annotation( "FMA:7487") "mesosternum") AnnotationAssertion(Annotation( "FMA:7487") "sternal body") AnnotationAssertion( "sternum body") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "body of the sternum") AnnotationAssertion(Annotation( ) Annotation( ) "corpus sterni") AnnotationAssertion( "UBERON:0006820") AnnotationAssertion(rdfs:label "body of sternum") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/2/23/Gray116.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (cutaneous muscle) AnnotationAssertion( ) AnnotationAssertion( "AAO:0000119") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37500") AnnotationAssertion( "FMA:74996") AnnotationAssertion( "NCIT:C32419") AnnotationAssertion(Annotation( "ncithesaurus:Cutaneous_Muscle") "UMLS:C1184459") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006821") AnnotationAssertion(rdfs:label "cutaneous muscle") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (proximal epiphysis of ulna) AnnotationAssertion(Annotation( ) "The head of ulna presents an articular surface, part of which, of an oval or semilunar form, is directed downward, and articulates with the upper surface of the triangular articular disk which separates it from the wrist-joint; the remaining portion, directed lateralward, is narrow, convex, and received into the ulnar notch of the radius.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:33751") AnnotationAssertion( "galen:HeadOfUlna") AnnotationAssertion(Annotation( "FMA:33751") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "caput ulnae") AnnotationAssertion(Annotation( "FMA:33751") "head of ulna") AnnotationAssertion(Annotation( "FMA:33751") "proximal end of ulna") AnnotationAssertion(Annotation( "FMA:33751") "upper end of ulna") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "caput ulnae") AnnotationAssertion( "UBERON:0006822") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "proximal epiphysis of ulna") SubClassOf( ) SubClassOf( ) # Class: (trabecula carnea of atrium) AnnotationAssertion(Annotation( "MP:0010581") "The supporting bundles of muscular fibers lining the walls of the atria[MP].") AnnotationAssertion( "Not present in any AO. Note that WP states that trabecular carnea are ventricular and 'They should not be confused with the pectinate muscles, which are present in the right and left atria only'") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006828") AnnotationAssertion(rdfs:label "trabecula carnea of atrium") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pre-tracheal muscle) AnnotationAssertion( "EMAPA:19269") AnnotationAssertion( "MA:0001798") AnnotationAssertion(Annotation( "MA:0001798") "pretracheal muscle") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006831") AnnotationAssertion(rdfs:label "pre-tracheal muscle") SubClassOf( ) # Class: (lumen of trachea) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An anatomical space that surrounded_by a trachea.") AnnotationAssertion( ) AnnotationAssertion( "FMA:7469") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "lumen of cartilaginous trachea") AnnotationAssertion(Annotation( "FMA:7469") "tracheal lumen") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006833") AnnotationAssertion(rdfs:label "lumen of trachea") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (uterus or analog) AnnotationAssertion(Annotation( ) "A subdivision of a the reproductive tract in a female organism that is the site of embryo development.") AnnotationAssertion(Annotation( "FBbt:00004924") Annotation( ) "uterus") AnnotationAssertion( "FBbt:00004924") AnnotationAssertion( "TADS:0000421") AnnotationAssertion( "WBbt:0006760") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006834") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "uterus or analog") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete arthropod oviduct) AnnotationAssertion(Annotation( "TADS:0000415") "A tube that connects ovary to the uterus.") AnnotationAssertion( "to be ceded to ARTHRO") AnnotationAssertion( "FBbt:00004911") AnnotationAssertion( "TADS:0000415") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006835") AnnotationAssertion(rdfs:label "obsolete arthropod oviduct") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (medial tibial tarsal bone) AnnotationAssertion(Annotation( "VSAO:0005048") "Endochondral tarsal bone that is medially located and between the intermedium and centralia.") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0000912") Annotation( "AAO"^^xsd:string) Annotation( "AAO:LAP"^^xsd:string) "One of two element that constitute the basal row of tarsals. The tibiale constitutes the postaxial element. In salamanders this element is aproximatelly rounded, whereas in anurans it is an elongate, cylindrical bone with the proximal and distal heads fused to the heads of the fibulare.[AAO]") AnnotationAssertion( "AAO:0000912") AnnotationAssertion( "EMAPA:36179") AnnotationAssertion( "MA:0001350") AnnotationAssertion( "VSAO:0005048") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "AAO:0000912") Annotation( "MA:0001350") "tibiale") AnnotationAssertion( "UBERON:0006836") AnnotationAssertion(rdfs:label "medial tibial tarsal bone") SubClassOf( ) # Class: (tegmen tympani) AnnotationAssertion(Annotation( ) "The Tegmental Wall or Roof (paries tegmentalis) is formed by a thin plate of bone, the tegmen tympani, which separates the cranial and tympanic cavities. It is situated on the anterior surface of the petrous portion of the temporal bone close to its angle of junction with the squama temporalis; it is prolonged backward so as to roof in the tympanic antrum, and forward to cover in the semicanal for the Tensor tympani muscle. Its lateral edge corresponds with the remains of the petrosquamous suture[Grays] .") AnnotationAssertion(Annotation( ) "TODO - check AAO; grouping is made on basis of related synonym. Crista parotica: seems to be the same as the crista prootica. However, since this lateral ridge of the otic capsule is frequently formed by the opisthotic, rather than the prootic, this may be a better name.; Crista prootica: a ledge or ridge which elaborates the dorsal surface of the prootic or, more generally, the roof of the otic capsule, laterally. The crista may extend posteriorly & laterally, continuous with the paroccipital process, and/or anteriorly or anteroventrally to protect cranial nerve foramina and form part of the fenestra ovalis/vestibuli. In basal tetrapodomorphs and tetrapods, the crista prootica forms the floor of the posttemporal fenestra. See The Prootic. In many tetrapods, the crista prootica is not ossified, or incompletely ossified. However, in frogs, the crista is the main strut joining the skull roofing bones (frontoparietals) with the squamosals. The crista prootica has a similarly expanded role in mammals where it forms an important part of the epitympanic recess and anchors the tympanohyal.") AnnotationAssertion( ) AnnotationAssertion( "AAO:0000116") AnnotationAssertion( "FMA:56002") AnnotationAssertion(Annotation( "FMA:56002") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "paries tegmentalis cavi tympani") AnnotationAssertion(Annotation( "FMA:56002") "tegmental roof of tympanic cavity") AnnotationAssertion(Annotation( "FMA:56002") "tegmental wall of tympanic cavity") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "AAO:0000116") Annotation( ) "crista parotica") AnnotationAssertion(Annotation( ) Annotation( "AAO:0000116") Annotation( ) "crista prootica") AnnotationAssertion(Annotation( "AAO:0000116") "processus muscularis capsulae auditivae") AnnotationAssertion(Annotation( "AAO:0000116") Annotation( ) "processus squamosus") AnnotationAssertion( "UBERON:0006837") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "tegmen tympani") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (ventral ramus of spinal nerve) AnnotationAssertion(Annotation( ) Annotation( ) "Branch of spinal nerve that innervates the hypaxial muscles.") AnnotationAssertion(Annotation( "FMA:5982") "ramus anterior") AnnotationAssertion( "ventral ramus") AnnotationAssertion( ) AnnotationAssertion( "FMA:5982") AnnotationAssertion(Annotation( "FMA:5982") "anterior primary ramus of spinal nerve") AnnotationAssertion(Annotation( "FMA:5982") "anterior ramus of spinal nerve") AnnotationAssertion(Annotation( "FMA:5982") "ventral ramus of spinal nerve") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:5982") "anterior branch of spinal nerve") AnnotationAssertion(Annotation( ) Annotation( ) "ramus anterior nervi spinalis") AnnotationAssertion( "UBERON:0006838") AnnotationAssertion(rdfs:label "ventral ramus of spinal nerve") AnnotationAssertion( "Spinal:nerve.svg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses(Annotation( "lexical"^^xsd:string) ) # Class: (dorsal ramus of spinal nerve) AnnotationAssertion(Annotation( ) Annotation( ) "Branch of spinal nerve that innervates the epaxial muscles.") AnnotationAssertion(Annotation( "FMA:5983") "dorsal ramus") AnnotationAssertion(Annotation( "FMA:5983") "ramus posterior") AnnotationAssertion( ) AnnotationAssertion( "FMA:5983") AnnotationAssertion(Annotation( "FMA:5983") "posterior primary ramus") AnnotationAssertion(Annotation( "FMA:5983") "posterior ramus of spinal nerve") AnnotationAssertion(Annotation( ) Annotation( ) "ramus posterior nervi spinalis") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:5983") "posterior branch of spinal nerve") AnnotationAssertion( "UBERON:0006839") AnnotationAssertion(rdfs:label "dorsal ramus of spinal nerve") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/b/b1/Gray819.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (nucleus of lateral lemniscus) AnnotationAssertion(Annotation( "NLX:69745") "Groups of cells situated largely within the fiber bundles of the lateral lemniscus. Two nuclei are usually distinguished: a ventral group and a dorsal group (Brodal, Neurological Anatomy, 3rd ed., 1981, pg. 619).") AnnotationAssertion(Annotation( "ZFA"^^xsd:string) "not clear if the ZFA class denotes the same entity; check relationship to midbrain tegmentum - this leads to inconsistency with ABA. The FMA class should represnet the grouping, but there is no FMA class for the singular at the moment") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:NLL") AnnotationAssertion( "DHBA:12454") AnnotationAssertion( "EV:0100265") AnnotationAssertion( "FMA:84025") AnnotationAssertion( "MBA:612") AnnotationAssertion( "NLX:69745") AnnotationAssertion( "TAO:0000380") AnnotationAssertion( "ZFA:0000380") AnnotationAssertion(Annotation( "ZFA:0000380") "lateral lemniscus nuclei") AnnotationAssertion(Annotation( "TAO:0000380") "lateral lemniscus nucleus") AnnotationAssertion(Annotation( "FMA:84025") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "nuclei lemnisci lateralis") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:84025") "nuclei of lateral lemniscus") AnnotationAssertion(Annotation( "BAMS:NLL") "nucleus of the lateral lemniscus") AnnotationAssertion(Annotation( "FMA:84025") "set of nuclei of lateral lemniscus") AnnotationAssertion( "UBERON:0006840") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "nucleus of lateral lemniscus") SubClassOf( ) # Class: (central vein of liver) AnnotationAssertion(Annotation( "ZFA:0005168") "Vein that is central to a lobule in the liver.") AnnotationAssertion(Annotation( "ZFA:0005168") "central vein") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:17544") AnnotationAssertion( "NCIT:C32281") AnnotationAssertion( "TAO:0005168") AnnotationAssertion( "ZFA:0005168") AnnotationAssertion(Annotation( "FMA:17544") "terminal branch of hepatic vein") AnnotationAssertion(Annotation( "FMA:17544") "terminal hepatic venule") AnnotationAssertion(Annotation( "FMA:17544") "vena centralis (hepar)") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006841") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "central vein of liver") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lymphatic capillary) AnnotationAssertion(Annotation( "ZFA:0005252") "Microvessel of the lymphatic system lined with a single layer of overlapping endothelial cells. Joins to form the lymphatic vessels.") AnnotationAssertion( "TODO - check superclass") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0005252") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "Microvessel of the lymphatic system lined with a single layer of overlapping endothelial cells.[TAO]") AnnotationAssertion( ) AnnotationAssertion( "FMA:5028") AnnotationAssertion( "NCIT:C33037") AnnotationAssertion( "TAO:0005252") AnnotationAssertion(Annotation( "ncithesaurus:Lymphatic_Capillary") "UMLS:C0162405") AnnotationAssertion( "ZFA:0005252") AnnotationAssertion(Annotation( "FMA:5028") "lymph capillary") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006842") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "lymphatic capillary") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf(Annotation( "ZFA"^^xsd:string) ) # Class: (root of cranial nerve) AnnotationAssertion(Annotation( ) "The initial segment of a cranial nerve, leaving the central nervous system.") AnnotationAssertion( "recommend asserting under this class rather than relying on inference, as relations may change") AnnotationAssertion( ) AnnotationAssertion( "FMA:52609") AnnotationAssertion( "TAO:0002190") AnnotationAssertion( "ZFA:0001663") AnnotationAssertion(Annotation( "FMA:52609") "cranial nerve root") AnnotationAssertion(Annotation( "FMA:52609") "cranial neural root") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006843") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "root of cranial nerve") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (cusp of tooth) AnnotationAssertion(Annotation( "ncithesaurus:Tooth_Cusp") "A raised area of the biting surface of a tooth.") AnnotationAssertion( "this class may be obsoleted and split - the TAO class is generic, the mammalian class refers specifically to a molariform tooth") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0001973") Annotation( "TAO"^^xsd:string) Annotation( "TAO:wd"^^xsd:string) "Anatomical structure that is a natural outgrowth, prominence, or point that is part of the surface of a tooth.[TAO]") AnnotationAssertion(Annotation( "2012-09-28") Annotation( ) "the elevated, somewhat pointed portions of the chewing surfaces on premolar and molar teeth") AnnotationAssertion( "cusp") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:56481") AnnotationAssertion( "NCIT:C94568") AnnotationAssertion( "TAO:0001973") AnnotationAssertion(Annotation( "ncithesaurus:Tooth_Cusp") "UMLS:C0226994") AnnotationAssertion( "ZFA:0005434") AnnotationAssertion(Annotation( "FMA:56481") "tooth cusp") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "ISBN:0073040584"^^xsd:string) "tooth cone") AnnotationAssertion( "UBERON:0006844") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "cusp of tooth") SubClassOf(Annotation( "ZFA"^^xsd:string) ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (abductor muscle) AnnotationAssertion(Annotation( "ZFA:0005269") "A muscle that moves a body part away from the sagittal plane/midline of the body[ZFA]. For example, the abductor muscles of the legs spread the legs away from the midline and away from one another. An abductor muscle opposes an adductor muscle[BTO].") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0002135") Annotation( "TAO"^^xsd:string) Annotation( "ZFA:curator") "A muscle that moves a body part away from the sagittal plane of the body.[TAO]") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0002135") Annotation( "TAO"^^xsd:string) "relationship loss: subclass cranial muscle (TAO:0001953)[TAO]") AnnotationAssertion(Annotation( "FMA"^^xsd:string) "in FMA the Adbuctor muscle is a subclass of Relation. It's unclear what this actually means, we leave it here as a grouping for now") AnnotationAssertion( "BTO:0004642") AnnotationAssertion( "FMA:74997") AnnotationAssertion( "TAO:0002135") AnnotationAssertion( "ZFA:0005269") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006845") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "abductor muscle") SubClassOf( ) # Class: (surface groove) AnnotationAssertion(Annotation( ) Annotation( "AEO:0000161") Annotation( "AEO:JB"^^xsd:string) "A furrow or an incomplete tube.") AnnotationAssertion( "AEO:0000161") AnnotationAssertion( "EHDAA2_RETIRED:0003161") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "AEO:0000161") "groove") AnnotationAssertion( "UBERON:0006846") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "surface groove") SubClassOf( ) # Class: (cerebellar commissure) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A nervous system commissure that connects a left hemisphere of cerebellum and connects a right hemisphere of cerebellum.") AnnotationAssertion( ) AnnotationAssertion( "BAMS:cbc") AnnotationAssertion( "DMBA:17754") AnnotationAssertion( "FMA:77522") AnnotationAssertion( "MBA:744") AnnotationAssertion( "TAO:0000490") AnnotationAssertion( "ZFA:0000490") AnnotationAssertion(Annotation( "ZFA:0000490") "commissura cerebelli") AnnotationAssertion( "commissure of cerebellum") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006847") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "cerebellar commissure") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (posterior pretectal nucleus) AnnotationAssertion( ) AnnotationAssertion( "BAMS:PPT") AnnotationAssertion( "BAMS:PTP") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37922") AnnotationAssertion( "FMA:84355") AnnotationAssertion( "MBA:1061") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006848") AnnotationAssertion(rdfs:label "posterior pretectal nucleus") SubClassOf( ) DisjointClasses(Annotation( "lexical"^^xsd:string) ) # Class: (scapula) AnnotationAssertion(Annotation( ) Annotation( ) Annotation( "VSAO:0000157") "Endochondral bone that is dorsoventrally compressed and provides attachment site for muscles of the pectoral appendage.") AnnotationAssertion(Annotation( "TAO:0000583") "Endochondral bone that is located medial to the cleithrum, and articulates ventrally with the coracoid, medially with the mesocoracoid when the later is present and posteriorly with the upper one to three proximal radials. The scapula develops from the scapulocoracoid cartilage and belongs to the primary pectoral girdle. It may be perforated by the scapular foramen or it may be notched ventr and forms together with a similar notch of the coracoid the scapulocoracoid foramen[TAO:0000583].") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0000751") Annotation( "AAO"^^xsd:string) Annotation( "AAO:LAP"^^xsd:string) "Paired bony elements of endochondral origin. They are situated at the level of the jaw articulation, in a vertical position, with the suprascapular margin being dorsal and the glenoid end being ventral.[AAO]") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0000751") Annotation( "AAO"^^xsd:string) "relationship loss: has pars glenoidalis of scapula (AAO:0000753)[AAO]") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0000751") Annotation( "AAO"^^xsd:string) "relationship loss: part_of scapular area (AAO:0000935)[AAO]") AnnotationAssertion( "scapular") AnnotationAssertion(Annotation( "ISBN:978-0-12-319060-4") "present in all tetrapods with even vestiges of anterior limbs, e.g., turtles & birds & mammals.") AnnotationAssertion( "chick scapula is of dual origin and segmentally organized") AnnotationAssertion( "UBERON:0001124") AnnotationAssertion( "UBERON:0010904") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0000751") AnnotationAssertion( "BTO:0001218") AnnotationAssertion( "CALOHA:TS-0897") AnnotationAssertion( "EFO:0001400") AnnotationAssertion( "EMAPA:18722") AnnotationAssertion( "FMA:13394") AnnotationAssertion( "GAID:186") AnnotationAssertion( "MA:0001330") AnnotationAssertion( "MESH:D012540") AnnotationAssertion( "NCIT:C12783") AnnotationAssertion( "OpenCyc:Mx4rvVji0JwpEbGdrcN5Y29ycA") AnnotationAssertion( "TAO:0000583") AnnotationAssertion(Annotation( "ncithesaurus:Scapula") "UMLS:C0036277") AnnotationAssertion( "VHOG:0001398") AnnotationAssertion( "VSAO:0000157") AnnotationAssertion( "ZFA:0000583") AnnotationAssertion( "galen:Scapula") AnnotationAssertion(Annotation( "ZFA:0000583") Annotation( ) "scapulae") AnnotationAssertion( "shoulder blade") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0001218") "scapula bone") AnnotationAssertion(Annotation( "TAO:0000583") Annotation( ) "scapulas") AnnotationAssertion( "UBERON:0006849") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "scapula") AnnotationAssertion( "Pectoral:girdles-en.svg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "ZFA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "definitional"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete tetrapod pectoral girdle) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006850") AnnotationAssertion(rdfs:label "obsolete tetrapod pectoral girdle") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (renal cortex peritubular capillary) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A peritubular capillary that is part of a cortex of kidney.") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37488") AnnotationAssertion( "MA:0002590") AnnotationAssertion(Annotation( "MA:0002590") "kidney cortex peritubular capillary") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006851") AnnotationAssertion(rdfs:label "renal cortex peritubular capillary") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (glomerular visceral epithelium) AnnotationAssertion( "EMAPA:28254") AnnotationAssertion( "MA:0002607") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "MA:0002607") "podocyte layer") AnnotationAssertion( "UBERON:0006852") AnnotationAssertion(rdfs:label "glomerular visceral epithelium") SubClassOf( ) # Class: (renal cortex tubule) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A region of nephron tubule that is part of a cortex of kidney.") AnnotationAssertion( "EMAPA:18976") AnnotationAssertion( "MA:0002609") AnnotationAssertion(Annotation( "MA:0002609") "kidney cortex tubule") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "MA:0002609") "cortical tubule") AnnotationAssertion( "UBERON:0006853") AnnotationAssertion(rdfs:label "renal cortex tubule") SubClassOf( ) SubClassOf(Annotation( "MA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (distal straight tubule postmacula segment) AnnotationAssertion( "EMAPA:28402") AnnotationAssertion( "MA:0002615") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "cortical thick ascending limb of Henle's loop") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "kidney cortex loop of Henle ascending limb thick segment") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "renal cortex loop of Henle ascending limb thick segment") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "renal cortex thick ascending limb") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006854") AnnotationAssertion(rdfs:label "distal straight tubule postmacula segment") SubClassOf( ) SubClassOf(Annotation( "MA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "MA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (muscular coat of ureter) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A muscular coat that is part of a ureter.") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:28811") AnnotationAssertion( "FMA:15893") AnnotationAssertion( "MA:0002654") AnnotationAssertion(Annotation( "FMA:15893") "muscular coat of ureter") AnnotationAssertion(Annotation( "FMA:15893") "muscular layer of ureter") AnnotationAssertion(Annotation( "FMA:15893") "muscularis of ureter") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) Annotation( ) "tunica muscularis (ureter)") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) Annotation( ) "tunica muscularis ureteris") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "EMAPA:28567") "ureteral smooth muscle layer") AnnotationAssertion( "UBERON:0006855") AnnotationAssertion(rdfs:label "muscular coat of ureter") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (interrenal gland) AnnotationAssertion(Annotation( ) Annotation( "BTO:0000808") "Structures in fishes homologous to the cortical tissue of the mammalian adrenal gland; they are in close proximity to or imbedded in the head kidney.") AnnotationAssertion( "check isa - not a true gland? There are two types of interrenal cells identified (1) The noradrenaline type, which contain heterogeneous vesicles with electron-dense granules located asymmetrically within the vesicular membrane. (2) The adrenaline type, in which the vesicles are smaller and contain homogenous electron-lucent granules that are separated from the vesicular membrane by a visible -- halo http://dev.biologists.org/content/130/10/2107.full") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0001345") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "An epithelial structure consisting of steroid producing cells interposed with chromaffin cells embedded within the head kidney. The interrenal gland is thought to be the equivalent of the mammalian adrenal cortex in zebrafish. Hsu et al. 2003.[TAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001141") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0030223693 Liem KF, Bemis WE, Walker WF, Grande L, Functional Anatomy of the Vertebrates: An Evolutionary Perspective (2001) p.518 and Figure 15-9") "All craniates have groups of cells homologous to the mammalian adrenocortical and chromaffin tissues, but they are scattered in and near the kidneys in fishes. (...) The cortical and chromaffin tissues come together to form adrenal glands in tetrapods.[well established][VHOG]") AnnotationAssertion( "BTO:0000808") AnnotationAssertion( "GAID:1227") AnnotationAssertion( "MESH:D007401") AnnotationAssertion( "TAO:0001345") AnnotationAssertion( "VHOG:0001141") AnnotationAssertion( "ZFA:0001345") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "interrenal") AnnotationAssertion( "interrenal bodies") AnnotationAssertion(Annotation( "BTO:0000808") "interrenal body") AnnotationAssertion( "interrenal gland") AnnotationAssertion( "interrenal tissue") AnnotationAssertion( "UBERON:0006856") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "interrenal gland") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "ZFA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "ZFA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (interrenal primordium) AnnotationAssertion( "consider ceding to TAO/ZFA - however, structure also present in cyclostomes") AnnotationAssertion( "splanchnic mesoderm adjacent to urogenital ridge") AnnotationAssertion( "TAO:0001346") AnnotationAssertion( "ZFA:0001346") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006857") AnnotationAssertion(rdfs:label "interrenal primordium") SubClassOf(Annotation( "Obol") ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (adrenal/interrenal gland) AnnotationAssertion(Annotation( "GO:0030325") "This gland can either be a discrete structure located bilaterally above each kidney, or a cluster of cells in the head kidney that perform the functions of the adrenal gland. In either case, this organ consists of two cells types, aminergic chromaffin cells and steroidogenic cortical cells[GO].") AnnotationAssertion( "keep this grouping class so long as it is required for GO") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001141") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0030223693 Liem KF, Bemis WE, Walker WF, Grande L, Functional Anatomy of the Vertebrates: An Evolutionary Perspective (2001) p.518 and Figure 15-9") "All craniates have groups of cells homologous to the mammalian adrenocortical and chromaffin tissues, but they are scattered in and near the kidneys in fishes. (...) The cortical and chromaffin tissues come together to form adrenal glands in tetrapods.[well established][VHOG]") AnnotationAssertion( "VHOG:0001141") AnnotationAssertion(Annotation( "VHOG:0001141") "adrenal gland - interrenal gland") AnnotationAssertion( "adrenal gland/interrenal tissue") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "VHOG:0001141") "adrenal - interrenal gland") AnnotationAssertion(Annotation( "VHOG:0001141") "suprarenal gland - interrenal gland") AnnotationAssertion( "UBERON:0006858") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "adrenal/interrenal gland") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (diaphysis proper) AnnotationAssertion(Annotation( ) "Subdivision of long bone which forms the part of the bone between two metaphyses. Note that the diaphysis includes the metaphyses, but the diaphysis proper excludes these.") AnnotationAssertion(Annotation( "MA"^^xsd:string) "The MA class is associated with EMAPA:35505 but we associate this with the more precise concept of diaphyseal plate") AnnotationAssertion( "FMA:32688") AnnotationAssertion( "MA:0002803") AnnotationAssertion(Annotation( "FMA:32688") "body proper of long bone") AnnotationAssertion(Annotation( "FMA:32688") "shaft proper of long bone") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "MA:0002803") Annotation( ) "long bone diaphysis") AnnotationAssertion( "UBERON:0006861") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "diaphysis proper") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (diaphysis of femur) AnnotationAssertion(Annotation( ) Annotation( "OBOL:automatic"^^xsd:string) "A diaphysis that is part of a femur[Automatically generated definition].") AnnotationAssertion(Annotation( ) "The body of the femur (or shaft), almost cylindrical in form, is a little broader above than in the center, broadest and somewhat flattened from before backward below. It is slightly arched, so as to be convex in front, and concave behind, where it is strengthened by a prominent longitudinal ridge, the linea aspera. It presents for examination three borders, separating three surfaces. Of the borders, one, the linea aspera, is posterior, one is medial, and the other, lateral[Wikipedia:Body_of_femur].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37538") AnnotationAssertion( "FMA:32847") AnnotationAssertion( "MA:0003055") AnnotationAssertion( "NCIT:C96209") AnnotationAssertion(Annotation( "FMA:32847") "body of femur") AnnotationAssertion(Annotation( "FMA:32847") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "corpus femoris") AnnotationAssertion(Annotation( "FMA:32847") "femoral diaphysis") AnnotationAssertion( "femoral shaft") AnnotationAssertion(Annotation( "FMA:32847") "shaft of femur") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006862") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "diaphysis of femur") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/2/2b/Gray244.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (proximal metaphysis of femur) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A proximal metaphysis that is part of a femur.") AnnotationAssertion( "FMA:32878") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006863") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "proximal metaphysis of femur") SubClassOf( ) SubClassOf( ) # Class: (distal metaphysis of femur) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A distal metaphysis that is part of a femur.") AnnotationAssertion( "FMA:32881") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006864") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "distal metaphysis of femur") SubClassOf( ) SubClassOf( ) # Class: (metaphysis of femur) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A metaphysis that is part of a femur.") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37540") AnnotationAssertion( "FMA:32875") AnnotationAssertion( "MA:0003052") AnnotationAssertion(Annotation( "FMA:32875") "femoral metaphysis") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006865") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "metaphysis of femur") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (terminal part of digestive tract) AnnotationAssertion(Annotation( ) "The distalmost portion of the digestive tract, derived from the hindgut, and terminating with the anus.") AnnotationAssertion( "this class is the superclass of 'rectum', which is currently reserved for the vertebrate structure. May be merged in future.") AnnotationAssertion( "FBbt:00005756") AnnotationAssertion( "WBbt:0005773") AnnotationAssertion(Annotation( "FBbt:00005756") "rectum") AnnotationAssertion( "uberon") AnnotationAssertion( "rectal part of digestive tract") AnnotationAssertion( "terminal section of digestive tract") AnnotationAssertion( "UBERON:0006866") AnnotationAssertion(rdfs:label "terminal part of digestive tract") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (anal part of perineum) AnnotationAssertion(Annotation( ) "The anal triangle is the posterior part of the perineum. It contains the anal canal. [WP,unvetted].") AnnotationAssertion(Annotation( "FMA:20347") "anal region") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:20347") AnnotationAssertion(Annotation( "FMA:20347") "anal triangle") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "regio analis") AnnotationAssertion( "UBERON:0006867") AnnotationAssertion(rdfs:label "anal part of perineum") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/f/fb/Gray408.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (seminal fluid secreting gland) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A gland that secretes a seminal fluid.") AnnotationAssertion( "FBbt:00004958") AnnotationAssertion( "WBbt:0006870") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006868") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "seminal fluid secreting gland") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (embryonic footplate) AnnotationAssertion(Annotation( ) Annotation( "MGI:csmith"^^xsd:string) Annotation( "MP:0004576") Annotation( "UBERON:cjm"^^xsd:string) "The distal elements of the developing limb of vertebrates that will give rise to the pes (foot).") AnnotationAssertion(Annotation( "EHDAA2"^^xsd:string) "EHDAA2 does not have a single class for footplate, but includes epithelium, mesenchyme and AER") AnnotationAssertion( "UBERON:0004343") AnnotationAssertion( "foot plate") AnnotationAssertion( "footplate") AnnotationAssertion( ) AnnotationAssertion( "EHDAA:5143") AnnotationAssertion( "EHDAA:6096") AnnotationAssertion( "EMAPA:17249") AnnotationAssertion( "FMA:296800") AnnotationAssertion( "NCIT:C34177") AnnotationAssertion(Annotation( "ncithesaurus:Foot_Plate") "UMLS:C1517291") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "EMAPA:17249") "distal part of hindlimb bud") AnnotationAssertion( "foot disk") AnnotationAssertion( "UBERON:0006871") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "embryonic footplate") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (handplate apical ectodermal ridge) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An apical ectodermal ridge that is part of a handplate.") AnnotationAssertion( "EHDAA2:0000729") AnnotationAssertion( "EMAPA:17247") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006872") AnnotationAssertion(rdfs:label "handplate apical ectodermal ridge") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (embryonic handplate) AnnotationAssertion(Annotation( "MGI:csmith"^^xsd:string) Annotation( "MP:0004576") Annotation( "UBERON:cjm"^^xsd:string) "The distal elements of the developing limb of vertebrates that will give rise to the manus (hand).") AnnotationAssertion( ) AnnotationAssertion( "EHDAA:4194") AnnotationAssertion( "EHDAA:6242") AnnotationAssertion( "EMAPA:17245") AnnotationAssertion( "FMA:296794") AnnotationAssertion( "NCIT:C34185") AnnotationAssertion(Annotation( "ncithesaurus:Hand_Plate") "UMLS:C1512334") AnnotationAssertion( "hand plate") AnnotationAssertion( "handplate") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "EMAPA:17245") "distal part of forelimb bud") AnnotationAssertion( "UBERON:0006875") AnnotationAssertion(rdfs:label "embryonic handplate") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (vasculature of organ) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A vasculature that is part of a organ.") AnnotationAssertion( "FMA:74612") AnnotationAssertion(Annotation( "FMA:74612") "organ vasculature") AnnotationAssertion(Annotation( "FMA:74612") "set of blood vessels of organ") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006876") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "vasculature of organ") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (vasculature of liver) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A vasculature that is part of a liver.") AnnotationAssertion(Annotation( "EHDAA2"^^xsd:string) "the EHDAA2 term and the FMA term may not be exact equivalents - check") AnnotationAssertion( "EHDAA2:0003454") AnnotationAssertion( "EMAPA:35501") AnnotationAssertion( "FMA:73748") AnnotationAssertion(Annotation( "FMA:73748") "hepatic vasculature") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "EMAPA:35501") "hepatic vascular element") AnnotationAssertion(Annotation( "EMAPA:35501") "liver vascular element") AnnotationAssertion(Annotation( "EHDAA2:0003454") "liver vascular system") AnnotationAssertion( "UBERON:0006877") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "vasculature of liver") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (decidua parietalis) AnnotationAssertion(Annotation( ) "The part of the decidua in the pregnant human female lining the uterus.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0000334") AnnotationAssertion( "FMA:86479") AnnotationAssertion( "NCIT:C32428") AnnotationAssertion(Annotation( "ncithesaurus:Decidua_Parietalis") "UMLS:C0230963") AnnotationAssertion(Annotation( "FMA:86479") "decidual parietalis") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0000334") "decidua vera") AnnotationAssertion( "UBERON:0006878") AnnotationAssertion(rdfs:label "decidua parietalis") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (head mesenchyme from mesoderm) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A head mesenchyme that develops_from a mesoderm.") AnnotationAssertion( "merged in 'head mesoderm' from XAO/AAO and EFO here. Partially implements https://github.com/obophenotype/uberon/wiki/The-neural-crest NC meeting scheme") AnnotationAssertion( "AAO:0011051") AnnotationAssertion( "EFO:0003337") AnnotationAssertion( "EFO:0003603") AnnotationAssertion( "EHDAA2:0001118") AnnotationAssertion( "EHDAA:655") AnnotationAssertion( "EMAPA:16099") AnnotationAssertion( "EMAPA_RETIRED:16270") AnnotationAssertion( "FMA:293859") AnnotationAssertion( "TAO:0000998") AnnotationAssertion( "VHOG:0000185") AnnotationAssertion( "XAO:0000053") AnnotationAssertion( "ZFA:0000998") AnnotationAssertion( "head mesenchyme derived from mesoderm") AnnotationAssertion(Annotation( "EHDAA2:0001118") "head mesenchyme from head mesoderm") AnnotationAssertion( "head mesenchyme from mesoderm") AnnotationAssertion(Annotation( "EHDAA:1057") "mesenchyme derived from head mesoderm") AnnotationAssertion( "mesenchyme from head mesoderm") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "UBERON:0005280") "cranial mesoderm") AnnotationAssertion(Annotation( "AAO:0011051") Annotation( "UBERON:0005280") "head mesoderm") AnnotationAssertion( "UBERON:0006904") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "head mesenchyme from mesoderm") SubClassOf( ) SubClassOf(Annotation( "ZFA"^^xsd:string) ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) Annotation( "XAO"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (mandibular process mesenchyme) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "Mesenchyme that is part of a mandibular prominence.") AnnotationAssertion( "EHDAA2:0001062") AnnotationAssertion( "EHDAA:5861") AnnotationAssertion( "EHDAA:5873") AnnotationAssertion( "EMAPA:17357") AnnotationAssertion(Annotation( "EMAPA:17357") "mesenchyme of mandibular process") AnnotationAssertion(Annotation( ) "mesenchyme of mandibular prominence") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006905") AnnotationAssertion(rdfs:label "mandibular process mesenchyme") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (ala of nose) AnnotationAssertion(Annotation( ) Annotation( ) "The lateral surface parts of the external nose, inferiorly, surrounding the naris[EoM].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:59519") AnnotationAssertion(Annotation( "FMA:59519") "nasal ala") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "ala nasi") AnnotationAssertion(Annotation( ) Annotation( ) "ala nasi") AnnotationAssertion(Annotation( ) "ala of the nose") AnnotationAssertion(Annotation( ) "wing of nose") AnnotationAssertion(Annotation( ) "wing of the nose") AnnotationAssertion(Annotation( ) "wings of the nose") AnnotationAssertion( "UBERON:0006906") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "ala of nose") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/e/e1/Gray852.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA-abduced-lr"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (slow muscle tissue) AnnotationAssertion(Annotation( "BTO:0002317") "The darker-colored muscle tissue of some mammals, composed of slow twitch muscle fibers.") AnnotationAssertion( "check if relationship to cell types should be more specific type I cells") AnnotationAssertion( "The fast and slow skeletal muscles are different in terms of twitching speed (Fitts 1994), and they are believed to be derived from distinct myogenic precursors (Stockdale 1992)") AnnotationAssertion(Annotation( "CALOHA") "check if CALOHA term is for fiber or tissue.") AnnotationAssertion( ) AnnotationAssertion( "BTO:0002317") AnnotationAssertion( "CALOHA:TS-0940") AnnotationAssertion( "NCIT:C12614") AnnotationAssertion(Annotation( "ncithesaurus:Muscle_Fibers_Slow-Twitch") "UMLS:C0242874") AnnotationAssertion(Annotation( "BTO:0002317") "slow muscle") AnnotationAssertion( "slow skeletal muscle tissue") AnnotationAssertion(Annotation( "CALOHA:TS-0940") "slow-twitch skeletal muscle") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0002317") "red muscle") AnnotationAssertion( "UBERON:0006907") AnnotationAssertion(rdfs:label "slow muscle tissue") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (fast muscle tissue) AnnotationAssertion(Annotation( "BTO:0002318") "The paler-colored muscle tissue of some mammals, composed of fast twitch muscle fibers.") AnnotationAssertion( ) AnnotationAssertion( "BTO:0002318") AnnotationAssertion( "NCIT:C12613") AnnotationAssertion(Annotation( "ncithesaurus:Muscle_Fibers_Fast-Twitch") "UMLS:C0242873") AnnotationAssertion(Annotation( "BTO:0002318") "fast muscle") AnnotationAssertion( "fast skeletal muscle tissue") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0002318") "white muscle") AnnotationAssertion( "UBERON:0006908") AnnotationAssertion(rdfs:comment "The fast and slow skeletal muscles are different in terms of twitching speed (Fitts 1994), and they are believed to be derived from distinct myogenic precursors (Stockdale 1992)") AnnotationAssertion(rdfs:label "fast muscle tissue") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lumen of digestive tract) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An anatomical space that surrounded_by a digestive tract.") AnnotationAssertion( "BTO:0000349") AnnotationAssertion( "EMAPA:32908") AnnotationAssertion( "FMA:45677") AnnotationAssertion(Annotation( ) "digestive tract lumen") AnnotationAssertion(Annotation( "BTO:0000349") "gut cavity") AnnotationAssertion(Annotation( "FMA:45677") "gut lumen") AnnotationAssertion(Annotation( ) "lumen of alimentary tract") AnnotationAssertion(Annotation( ) "lumen of digestive tract") AnnotationAssertion(Annotation( "FMA:45677") "lumen of gut") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006909") AnnotationAssertion(rdfs:label "lumen of digestive tract") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (digestive system secreted substance) AnnotationAssertion( "BTO:0000346") AnnotationAssertion( "MA:0002512") AnnotationAssertion(Annotation( "MA:0002512") "digestive system fluid or secretion") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0000346") "digestive fluid") AnnotationAssertion(Annotation( "BTO:0000346") "digestive juice") AnnotationAssertion( "UBERON:0006911") AnnotationAssertion(rdfs:label "digestive system secreted substance") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (urinary bladder muscularis mucosa) AnnotationAssertion(Annotation( ) Annotation( "NCIT:C32207") "A thin layer of smooth muscle within the bladder lamina propria.") AnnotationAssertion( "One study observed that in humans this layer is frequently discontinuous, sparse or sometimes hyperplastic or absent[PMID:3631381]") AnnotationAssertion(Annotation( "EMAPA:28619") "muscularis mucosa of bladder") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:28619") AnnotationAssertion( "MA:0002490") AnnotationAssertion( "NCIT:C32207") AnnotationAssertion(Annotation( "ncithesaurus:Bladder_Muscularis_Mucosa") "UMLS:C1511195") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "muscularis mucosa of urinary bladder") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006912") AnnotationAssertion(rdfs:label "urinary bladder muscularis mucosa") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lip epithelium) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An epithelium that is part of a lip.") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0005334") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:ZDB-PUB-060921-12") "The thick, high squamous-stratified epithelium that covers the lips. It contains abundant melanocytes, many mucous cells and has well differentiated taste buds.[TAO]") AnnotationAssertion( "BTO:0004468") AnnotationAssertion( "TAO:0005334") AnnotationAssertion( "ZFA:0005334") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006913") AnnotationAssertion(rdfs:label "lip epithelium") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (squamous epithelium) AnnotationAssertion(Annotation( ) "An epithelium characterised by its most superficial layer consisting of squamous epithelial cells.") AnnotationAssertion(Annotation( "FBbt") "FBbt:00007028 (squamous epithelium) A type of epithelium that is made up of flattened cells which are arranged with their long axes in the plane of the epithelium") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0002072") AnnotationAssertion( "NCIT:C12848") AnnotationAssertion(Annotation( "ncithesaurus:Squamous_Epithelium") "UMLS:C0221909") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006914") AnnotationAssertion(rdfs:label "squamous epithelium") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (stratified squamous epithelium) AnnotationAssertion(Annotation( ) Annotation( "FMA:45563") "Multilaminar epithelium which consists of more than one layer of squamous cells only one layer of which is in contact with a basement membrane. Examples: keratinized stratified squamous epithelium, epithelium of wall of esophagus.[FMA].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:45563") AnnotationAssertion( "NCIT:C13180") AnnotationAssertion(Annotation( "ncithesaurus:Stratified_Squamous_Epithelium") "UMLS:C0836131") AnnotationAssertion(Annotation( "FMA:45563") "epithelium stratificatum squamosum") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006915") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "stratified squamous epithelium") SubClassOf( ) SubClassOf( ) # Class: (non-keratinized epithelium of tongue) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A non-keratinized stratified squamous epithelium that is part of a tongue.") AnnotationAssertion( "FMA:62130") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006916") AnnotationAssertion(rdfs:label "non-keratinized epithelium of tongue") SubClassOf( ) SubClassOf( ) # Class: (parakeratinized epithelium of tongue) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A parakeratinized epithelium that is part of a tongue.") AnnotationAssertion( "FMA:74908") AnnotationAssertion( "tongue parakeratinized epithelium") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006918") AnnotationAssertion(rdfs:label "parakeratinized epithelium of tongue") SubClassOf( ) SubClassOf( ) # Class: (tongue squamous epithelium) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A squamous epithelium that is part of a tongue.") AnnotationAssertion(Annotation( "MA"^^xsd:string) "this is a singleton subclass of tongue epithelium in MA") AnnotationAssertion( "MA:0002786") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "squamous epithelium of tongue") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006919") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "tongue squamous epithelium") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (esophagus squamous epithelium) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A squamous epithelium that is part of a esophagus.") AnnotationAssertion(Annotation( "MA"^^xsd:string) "MA introduces basal and squamous subtypes of esophagus epithelium; consider adding the FMA class 'epithelium of esophagus' here, because it is classified as squamous. BTO also has a singleton subclass") AnnotationAssertion( ) AnnotationAssertion( "BTO:0003635") AnnotationAssertion( "CALOHA:TS-1250") AnnotationAssertion( "EMAPA:35324") AnnotationAssertion( "MA:0001567") AnnotationAssertion( "NCIT:C49222") AnnotationAssertion(Annotation( "ncithesaurus:Esophageal_Squamous_Epithelium") "UMLS:C1707950") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "esophageal squamous epithelium") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "squamous epithelium of esophagus") AnnotationAssertion(Annotation( "MA:0001567") "squamous oesophageal epithelium") AnnotationAssertion( "UBERON:0006920") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "esophagus squamous epithelium") SubClassOf( ) SubClassOf( ) # Class: (stomach squamous epithelium) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A squamous epithelium that is part of a stomach.") AnnotationAssertion( "EMAPA:35824") AnnotationAssertion( "MA:0001611") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006921") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "stomach squamous epithelium") SubClassOf( ) SubClassOf( ) # Class: (cervix squamous epithelium) AnnotationAssertion(Annotation( ) "The squamous epithelium of the cervical portio is similar to that of the vagina, except that it is generally smooth and lacks rete pegs. Colposcopically, it appears featureless except for a fine network of vessels which is sometimes visible. The relative opacity and pale pink coloration of the squamous epithelium derives from its multi-layered histology and the location of its supporting vessels below the basement membrane.") AnnotationAssertion( ) AnnotationAssertion( "MA:0001725") AnnotationAssertion( "NCIT:C49219") AnnotationAssertion(Annotation( "ncithesaurus:Cervix_Squamous_Epithelium") "UMLS:C1707351") AnnotationAssertion( "cervical squamous epithelium") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006922") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "cervix squamous epithelium") SubClassOf( ) SubClassOf( ) # Class: (vagina squamous epithelium) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A squamous epithelium that is part of a vagina.") AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37794") AnnotationAssertion( "MA:0001731") AnnotationAssertion( "NCIT:C49314") AnnotationAssertion(Annotation( "ncithesaurus:Vaginal_Squamous_Epithelium") "UMLS:C1711259") AnnotationAssertion( "vaginal squamous epithelium") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006923") AnnotationAssertion(rdfs:label "vagina squamous epithelium") SubClassOf( ) SubClassOf( ) # Class: (stomach glandular epithelium) AnnotationAssertion(Annotation( "ISBN:0073040584"^^xsd:string) "A glandular epithelium that lines the stomach. The stomach's glandular epithelium is characterized by the presence of gastric glands.") AnnotationAssertion( "we follow Kardong in treating the glandular epithelium as a distinct entity, and thus as an epithelium which has glands; FMA has 'epithelium of gastric gland', which is part of the gastric gland.") AnnotationAssertion( "EMAPA:17623") AnnotationAssertion( "EMAPA:35814") AnnotationAssertion( "FMA:63458") AnnotationAssertion( "MA:0002784") AnnotationAssertion(Annotation( "FMA:63458") "epithelium of gastric gland") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:63458") "gastric gland epithelium") AnnotationAssertion( "UBERON:0006924") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "stomach glandular epithelium") SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (digestive system gland) AnnotationAssertion(Annotation( "UBERON:cjm"^^xsd:string) "Any gland that is part of the digestive system.") AnnotationAssertion( "AAO:0000130") AnnotationAssertion( "BTO:0000345") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0000345") "digestive gland") AnnotationAssertion( "UBERON:0006925") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "digestive system gland") SubClassOf( ) SubClassOf( ) # Class: (glandular columnar epithelium) AnnotationAssertion(Annotation( "FMA:64800") "Simple columnar epithelium that constitutes the secretory part of a gland. Examples: epithelium of stomach, luminal epithelium of lactiferous duct.[FMA].") AnnotationAssertion( ) AnnotationAssertion( "FMA:64800") AnnotationAssertion( "NCIT:C13182") AnnotationAssertion(Annotation( "ncithesaurus:Columnar_Epithelium") "UMLS:C0225337") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006929") AnnotationAssertion(rdfs:label "glandular columnar epithelium") SubClassOf( ) SubClassOf( ) # Class: (glandular cuboidal epithelium) AnnotationAssertion( "FMA:66809") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006930") AnnotationAssertion(rdfs:label "glandular cuboidal epithelium") SubClassOf( ) SubClassOf( ) # Class: (stomach glandular region mucosa) AnnotationAssertion(Annotation( ) "Stomach mucosa that is lined with glandular epithelium and part of a stomach glandular region.") AnnotationAssertion( "EMAPA:27167") AnnotationAssertion( "MA:0001614") AnnotationAssertion(Annotation( "EMAPA:27167") "stomach glandular region glandular mucous membrane") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006931") AnnotationAssertion(rdfs:label "stomach glandular region mucosa") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (vestibular epithelium) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An epithelium that is part of a vestibular labyrinth.") AnnotationAssertion( "BTO:0005581") AnnotationAssertion( "EMAPA:32884") AnnotationAssertion( "EMAPA:35921") AnnotationAssertion( "FMA:75606") AnnotationAssertion( "MA:0002892") AnnotationAssertion( "RETIRED_EHDAA2:0000834") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "epithelium of vestibular labyrinth") AnnotationAssertion(Annotation( "RETIRED_EHDAA2:0000834") "inner ear vestibular component epithelium") AnnotationAssertion(Annotation( "FMA:75606") "vestibular sensory epithelium") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006932") AnnotationAssertion(rdfs:label "vestibular epithelium") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (sensory epithelium) AnnotationAssertion(Annotation( "BTO:0000314") "Simple columnar epithelium made up of cells specialized to serve as sensory cells for the reception of external stimuli, as the sensory cells of the cochlea, vestibule, nasal mucosa, and tongue.") AnnotationAssertion(Annotation( "FMA"^^xsd:string) "note that the definition sourced from Dorlands say 'simple columnar', but FMA says atypical") AnnotationAssertion( ) AnnotationAssertion( "CALOHA:TS-0682") AnnotationAssertion( "FMA:62410") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0000314") Annotation( ) "neuroepithelium") AnnotationAssertion( "UBERON:0006934") AnnotationAssertion(rdfs:label "sensory epithelium") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (crista ampullaris neuroepithelium) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An epithelium that is part of a crista ampullaris.") AnnotationAssertion( "FMA:75636") AnnotationAssertion( "MA:0002870") AnnotationAssertion(Annotation( "FMA:75636") "epithelium of crista of ampulla of semicircular duct of membranous labyrinth") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "MA:0002870") "ampullary crest neuroepithelium") AnnotationAssertion( "UBERON:0006935") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "crista ampullaris neuroepithelium") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf(Annotation( "MA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (thymus subcapsular epithelium) AnnotationAssertion(Annotation( "ISBN:0-8153-1691-7") Annotation( "MGI:cwg"^^xsd:string) Annotation( "MP:0002369") "The epithelial cells lining the capsule and trabeculae of the thymus.") AnnotationAssertion( "TODO - check whether this is part of the thymus or borders it") AnnotationAssertion( "MA:0000769") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006936") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "thymus subcapsular epithelium") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (inner ear epithelium) AnnotationAssertion(Annotation( "MGI:csmith"^^xsd:string) Annotation( "MP:0003308") "The epithelial cell layer containing the sensory hair cells and their associated sensory nerve terminals.") AnnotationAssertion( "EMAPA:32883") AnnotationAssertion( "MA:0001189") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006937") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "inner ear epithelium") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pinna surface epithelium) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An epithelium that is part of a pinna.") AnnotationAssertion( "EHDAA2:0001470") AnnotationAssertion( "EHDAA:8983") AnnotationAssertion( "EMAPA:17592") AnnotationAssertion( "VHOG:0000632") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006938") AnnotationAssertion(rdfs:label "pinna surface epithelium") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (efferent duct) AnnotationAssertion(Annotation( ) "The efferent ducts (or efferent ductules or ductuli efferentes) connect the rete testis with the initial section of the epididymis. The ductuli are unilaminar and composed of columnar ciliated and non-ciliated (absorptive) cells. The ciliated cells serve to stir the luminal fluids, possibly to help ensure homogeneous absorption of water from the fluid produced by the testis, which results in an increase in the concentration of luminal sperm. The epithelium is surrounded by a band of smooth muscle that helps to propel the sperm toward the epididymis.") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0010532") Annotation( "AAO"^^xsd:string) Annotation( "AAO:BJB"^^xsd:string) "Any of a group ranging from one to twelve (varies in species) small seminal ducts per testis which transport sperm from the testes to the kidney.[AAO]") AnnotationAssertion( "There are two basic designs for efferent ductule structure: a) multiple entries into the epididymis, as seen in most large mammals. In humans and other large mammals, there are approximately 15-20 efferent ducts, which also occupy nearly one third of the head of the epididymis. b) single entry, as seen in most small animals such as rodents, whereby the 3-6 ductules merge into a single small ductule prior to entering the epididymis") AnnotationAssertion(Annotation( "EMAPA"^^xsd:string) "Check EMAPA") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010532") AnnotationAssertion( "EMAPA:18993") AnnotationAssertion( "FMA:19081") AnnotationAssertion( "MA:0000398") AnnotationAssertion( "NCIT:C32492") AnnotationAssertion(Annotation( "ncithesaurus:Efferent_Ductule") "UMLS:C0228013") AnnotationAssertion(Annotation( ) "efferent ductule") AnnotationAssertion(Annotation( "FMA:19081") "efferent ductule") AnnotationAssertion( "seminal duct") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "ductuli efferentes testis") AnnotationAssertion(Annotation( ) Annotation( ) "ductuli efferentes testis") AnnotationAssertion(Annotation( ) Annotation( "AAO:0010532") "vasa efferentia") AnnotationAssertion( "UBERON:0006946") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "efferent duct") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/b/b5/Hodenschema.svg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (male genital duct) AnnotationAssertion(Annotation( ) "A duct or series of ducts that transports sperm from the gonad. In mammals this is from the seminiferous tubules through rete testis, vas efferentia, epididymis, vas deferens, ejeculatory duct to the urethra.") AnnotationAssertion( "we use this as a generic grouping class for a number of taxa") AnnotationAssertion(Annotation( "FMA"^^xsd:string) "in FMA includes as parts: seminal vesicle, efferent ductule (vas efferentia), epididymis, deferent duct (vas deferens), ejaculatory duct") AnnotationAssertion( "UBERON:0010140") AnnotationAssertion( "FMA:55678") AnnotationAssertion( "TAO:0001268") AnnotationAssertion( "ZFA:0001268") AnnotationAssertion(Annotation( "ZFA:0001268") "sperm duct") AnnotationAssertion(Annotation( "TAO:0001268") Annotation( ) "sperm ducts") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006947") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "male genital duct") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA-abduced-lr"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (efferent duct epithelium) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An epithelium that is part of a efferent duct.") AnnotationAssertion( "EMAPA:29747") AnnotationAssertion( "FMA:19195") AnnotationAssertion( "MA:0001734") AnnotationAssertion(Annotation( "FMA:19195") "epithelium of efferent ductule of testis") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006948") AnnotationAssertion(rdfs:label "efferent duct epithelium") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (cervical loop) AnnotationAssertion(Annotation( ) "The cervical loop is the location on an enamel organ in a developing tooth where the outer enamel epithelium and the inner enamel epithelium join. The cervical loop is a histologic term indicating a specific epithelial structure at the apical side of the tooth germ, consisting of loosely aggregated stellate reticulum in the center surrounded by stratum intermedium. These tissues are enveloped by a basal layer of epithelium known on the outside of the tooth as outer enamel epithelium and on the inside as inner enamel epithelium. During root formation the inner layers of epithelium disappear and only the basal layers are left creating Hertwig's Epithelial Root Sheath (HERS). At this point it is usually referred to as HERS instead of the cervical loop to indicate the structural difference[WP].") AnnotationAssertion( ) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006949") AnnotationAssertion(rdfs:label "cervical loop") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (stellate reticulum) AnnotationAssertion(Annotation( ) "The stellate reticulum is a group of cells located in the center of the enamel organ of a developing tooth. These cells are star shaped and synthesize glycosaminoglycans. As glycosamingoglycans are produced, water is drawn in between the cells and stretch them apart. As they are moved further away from one another, the stellate reticulum maintain contact with one another through desmosomes, resulting in their unique appearance. stellate reticulum is lost after the first layer of dentin is laid down. this brings cells in inner enamel epithelium closer to blood vessels at the periphery[WP].") AnnotationAssertion( "UBERON:0007441") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0003910") AnnotationAssertion( "NCIT:C33613") AnnotationAssertion(Annotation( "ncithesaurus:Stellate_Reticulum") "UMLS:C1514963") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "reticulum stellatum") AnnotationAssertion( "UBERON:0006950") AnnotationAssertion(rdfs:label "stellate reticulum") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/e/e3/Cervical-loop.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (inner dental epithelium) AnnotationAssertion(Annotation( ) Annotation( "ZFA:0005136") "Inner layer of cells of the dental organ, nearest the odontogenic papilla, and composed of ameloblasts.") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0005136") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "Inner layer of the dental organ, composed of ameloblasts.[TAO]") AnnotationAssertion( "The location of the enamel organ where the outer and inner enamel epithelium join is called the cervical loop") AnnotationAssertion( "This layer is first seen during the bell stage") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0003463") AnnotationAssertion( "NCIT:C32804") AnnotationAssertion( "TAO:0005136") AnnotationAssertion(Annotation( "ncithesaurus:Inner_Enamel_Epithelium") "UMLS:C1512780") AnnotationAssertion( "ZFA:0005136") AnnotationAssertion(Annotation( ) Annotation( "ZFA:0005136") "inner enamel epithelium") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "epithelium enameleum internum") AnnotationAssertion(Annotation( "BTO:0003463") "internal enamel epithelium") AnnotationAssertion( "UBERON:0006951") AnnotationAssertion(rdfs:label "inner dental epithelium") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/e/e3/Cervical-loop.png"^^xsd:anyURI) SubClassOf(Annotation( "ZFA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (outer dental epithelium) AnnotationAssertion(Annotation( ) Annotation( "ZFA:0005137") "Outer layer of cells of the dental organ.") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0005137") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "Outer layer of the dental organ.[TAO]") AnnotationAssertion( "This layer is first seen during the bell stage") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0003462") AnnotationAssertion( "NCIT:C33232") AnnotationAssertion( "TAO:0005137") AnnotationAssertion(Annotation( "ncithesaurus:Outer_Enamel_Epithelium") "UMLS:C1518682") AnnotationAssertion( "ZFA:0005137") AnnotationAssertion(Annotation( "BTO:0003462") "external dental epithelium") AnnotationAssertion(Annotation( ) "external enamel epithelium") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "outer enamel epithelium") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "epithelium enameleum externum") AnnotationAssertion(Annotation( "TAO:0005137") "outer enamel epithilium") AnnotationAssertion( "UBERON:0006952") AnnotationAssertion(rdfs:label "outer dental epithelium") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/e/e3/Cervical-loop.png"^^xsd:anyURI) SubClassOf(Annotation( "ZFA"^^xsd:string) ) # Class: (ejaculatory duct epithelium) AnnotationAssertion(Annotation( ) "The ejaculatory duct epithelium is composed of cuboidal to columnar cells between or through which project the terminal parts of the ducts of the unicellular prostate glands.") AnnotationAssertion( "TODO - split off insect classes") AnnotationAssertion( "BTO:0002618") AnnotationAssertion( "EMAPA:29786") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006953") AnnotationAssertion(rdfs:label "ejaculatory duct epithelium") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (mammary gland myoepithelium) AnnotationAssertion(Annotation( "MGI:anna"^^xsd:string) "The outer cell layer of the mammary gland epithelium bilayer which is located basal to the luminal (secretory) cells and adjacent to the basement membrane.") AnnotationAssertion( "The cells of this structure are specialized epithelial cells that express smooth muscle-specific contractile and cytoskeletal properties; during lactation, MECs contract in response to oxytocin to generate the contractile force required for milk ejection; MECs are involved in all developmental stages of mammary gland morphogenesis, modulating proliferation and differentiation of luminal cells; they take part in the formation of extracellular matrix, synthesizing its components and secreting proteinases and their inhibitors; in addition, MECs are regarded as natural cancer suppressors: they secrete suppressor proteins limiting cancer growth, invasiveness, and neoangiogenesis; MECs are markedly resistant to malignant transformation and they are able to suppress the transformation of neighboring luminal cells[MP]") AnnotationAssertion( "BTO:0002310") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37903") AnnotationAssertion( "FMA:67798") AnnotationAssertion(Annotation( "FMA:67798") "lactiferous ductal myo-epithelium") AnnotationAssertion(Annotation( "BTO:0002310") "mammary myoepithelium") AnnotationAssertion(Annotation( "FMA:67798") "myo-epithelium of lactiferous duct") AnnotationAssertion(Annotation( "FMA:67798") "myoepithelium of lactiferous duct") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006954") AnnotationAssertion(rdfs:label "mammary gland myoepithelium") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (uterine epithelium) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An epithelium that is part of a uterus.") AnnotationAssertion( "BTO:0003082") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0003082") "uterus epithelium") AnnotationAssertion( "UBERON:0006955") AnnotationAssertion(rdfs:label "uterine epithelium") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (buccal mucosa) AnnotationAssertion(Annotation( ) "The inner lining of the cheeks and lips.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0003833") AnnotationAssertion( "CALOHA:TS-2349") AnnotationAssertion( "FMA:59785") AnnotationAssertion( "NCIT:C12505") AnnotationAssertion(Annotation( "ncithesaurus:Buccal_Mucosa") "UMLS:C1578559") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006956") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "buccal mucosa") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (submandibular gland primordium epithelium) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An epithelium that is part of a submandibular gland primordium.") AnnotationAssertion( "EHDAA2:0001940") AnnotationAssertion( "EHDAA:9257") AnnotationAssertion( "EMAPA:17756") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "EMAPA:17756") "submaxillary gland primordium epithelium") AnnotationAssertion( "UBERON:0006957") AnnotationAssertion(rdfs:label "submandibular gland primordium epithelium") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (great vein of heart) AnnotationAssertion(Annotation( ) "The Great Cardiac Vein (left coronary vein) begins at the apex of the heart and ascends along the anterior longitudinal sulcus to the base of the ventricles. It then curves to the left in the coronary sulcus, and reaching the back of the heart, opens into the left extremity of the coronary sinus. It receives tributaries from the left atrium and from both ventricles: one, the left marginal vein, is of considerable size, and ascends along the left margin of the heart.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0004508") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37225") AnnotationAssertion( "FMA:4707") AnnotationAssertion( "MA:0002131") AnnotationAssertion( "NCIT:C12879") AnnotationAssertion(Annotation( "ncithesaurus:Great_Cardiac_Vein") "UMLS:C0226659") AnnotationAssertion(Annotation( "FMA:4707") "great cardiac vein") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "vena cardiaca magna") AnnotationAssertion(Annotation( ) Annotation( ) "vena cordis magna") AnnotationAssertion( "UBERON:0006958") AnnotationAssertion(rdfs:label "great vein of heart") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/5/57/Gray556.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (mandible angular process) AnnotationAssertion(Annotation( ) "A process which protrudes from the ventral caudal angle of the mandible, and acts as the attachment of the digastric muscle.") AnnotationAssertion( "requires verification, coordinate with rd. Note in FEED the superficial messeter attaches to the angle of the mandible; in MD the mandicular angual process is attachment site for the digastric muscle") AnnotationAssertion( "FMA:294636") AnnotationAssertion( "MA:0002873") AnnotationAssertion( "MFMO:0000055") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:59459") "angle of mandible") AnnotationAssertion(Annotation( "MA:0002873") "mandibular angle") AnnotationAssertion( "UBERON:0006959") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "mandible angular process") AnnotationAssertion(rdfs:seeAlso ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (ovary stroma) AnnotationAssertion(Annotation( ) "The stroma of the ovary is a peculiar soft tissue, abundantly supplied with blood vessels, consisting for the most part of spindle-shaped cells with a small amount of ordinary connective tissue. These cells have been regarded by some anatomists as unstriped muscle cells, which, indeed, they most resemble; by others as connective-tissue cells. On the surface of the organ this tissue is much condensed, and forms a layer composed of short connective-tissue fibers, with fusiform cells between them. The stroma of the ovary may contain interstitial cells resembling those of the testis.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "CALOHA:TS-1246") AnnotationAssertion( "EMAPA:28880") AnnotationAssertion( "FMA:18626") AnnotationAssertion( "MA:0002991") AnnotationAssertion( "NCIT:C33638") AnnotationAssertion(Annotation( "ncithesaurus:Stroma_of_the_Ovarian_Cortex") "UMLS:C0737271") AnnotationAssertion(Annotation( "FMA:18626") "interstitial tissue of ovary") AnnotationAssertion(Annotation( "FMA:18626") "ovarian stroma") AnnotationAssertion(Annotation( "MA:0002991") "ovary stroma") AnnotationAssertion(Annotation( ) "stroma of the ovary") AnnotationAssertion(Annotation( "FMA:18626") "stroma ovarica") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "stroma ovarii") AnnotationAssertion( "UBERON:0006960") AnnotationAssertion(rdfs:label "ovary stroma") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (pars distalis of adenohypophysis) AnnotationAssertion(Annotation( ) Annotation( "Dorlands_Medical_Dictionary:MerckSource") "The distal part of adenohypophysis: the part that makes up the main body of the gland.") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0010542") Annotation( "AAO"^^xsd:string) Annotation( "AAO:BJB"^^xsd:string) "Region of the adenohypophysis which produces the follicle-stimulating hormone, luteinizing hormone, prolactin, thyrotropin, and adrenocorticotropin.[AAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000244") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( ) "The anterior part of the adenohypophysis. [TFD][VHOG]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000244") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0030223693 Liem KF, Bemis WE, Walker WF, Grande L, Functional Anatomy of the Vertebrates: An Evolutionary Perspective (2001) p.510 and Figure 15-5") "It (the hypophysis) develops embryonically in all vertebrates from two ectodermal evaginations that meet and unite. An infundibulum grows ventrally from the diencephalon of the brain, and Rathke's pouch extends dorsally from the roof of the developing mouth, or stomodaeum. The infundibulum remains connected to the floor of the diencephalon, which becomes the hypothalamus, and gives rise to the part of the gland known as the neurohypophysis. (...) Rathke's pouch loses its connection with the stomodaeum in most adult vertebrates and gives rise to the rest of the gland, the adenohypophysis. (...) A well-developed hypophyseal system with functional connections to the hypothalamus is unique to craniates.[well established][VHOG]") AnnotationAssertion(Annotation( "BIRNLEX:1022") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "DHP") AnnotationAssertion(Annotation( "EHDAA2:0001416") Annotation( "MA:0000854") Annotation( "ZFA:0001195") "pars anterior") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010542") AnnotationAssertion( "BAMS:DHP") AnnotationAssertion( "BIRNLEX:1022") AnnotationAssertion( "BTO:0001787") AnnotationAssertion( "EHDAA2:0001416") AnnotationAssertion( "EHDAA:7532") AnnotationAssertion( "EMAPA:17515") AnnotationAssertion( "FMA:74630") AnnotationAssertion( "MA:0000854") AnnotationAssertion( "TAO:0001195") AnnotationAssertion(Annotation( "BIRNLEX:1022") "UMLS:C0175322") AnnotationAssertion( "VHOG:0000244") AnnotationAssertion( "ZFA:0001195") AnnotationAssertion(Annotation( "BIRNLEX:1022") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=410") AnnotationAssertion(Annotation( "BIRNLEX:1022") "distal part of hypophysis") AnnotationAssertion(Annotation( "FMA:74630") "pars anterior of adenohypophysis") AnnotationAssertion(Annotation( "FMA:74630") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "pars distalis (glandula pituitaria)") AnnotationAssertion(Annotation( "FMA:74630") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "pars distalis adenohypophysis") AnnotationAssertion(Annotation( "FMA:74630") "pars distalis of anterior lobe of pituitary gland") AnnotationAssertion(Annotation( "FMA:74630") "pars glandularis of adenohypophysis") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "MA:0000854") "anterior lobe") AnnotationAssertion(Annotation( "NeuroNames:410") "distal part of the hypophysis") AnnotationAssertion(Annotation( "MA:0000854") "pars distalis") AnnotationAssertion(Annotation( "NeuroNames:410") Annotation( ) "pars distalis (hypophysis)") AnnotationAssertion(Annotation( "BTO:0001787") "pars distalis adenohypophyseos") AnnotationAssertion(Annotation( "BTO:0001787") "pars distalis lobi anterioris hypophyseos") AnnotationAssertion(Annotation( "MA:0000854") "pars glandularis") AnnotationAssertion( "UBERON:0006964") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "pars distalis of adenohypophysis") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "MA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (vascular cord) AnnotationAssertion(Annotation( "GO:0072360") Annotation( "ZFA:0005077") "The vascular cord is the primordial vasculature that will develop into blood vessels by the process of tubulogenesis[GO]. The vascular cord is composed of angioblast or vascular endothelial cells in a solid linear mass called a cord. The cord then undergoes tubulogenesis to form the lumen of the vessels[ZFA].") AnnotationAssertion( "EFO:0003709") AnnotationAssertion( "TAO:0005077") AnnotationAssertion( "ZFA:0005077") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006965") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "vascular cord") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (coronary capillary) AnnotationAssertion(Annotation( ) "A capillary that is part of the coronary system.") AnnotationAssertion( "ZFA:0005813") AnnotationAssertion(Annotation( "GO:0003248") "heart capillary") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006966") AnnotationAssertion(rdfs:label "coronary capillary") SubClassOf( ) SubClassOf( ) # Class: (cranial appendage) AnnotationAssertion(Annotation( ) "An anatomical projection that is part of and protrudes from the head.") AnnotationAssertion( "revisit after CARO2 appendage issue is sorted. Note that antennae are appendages that protrude from the head") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006969") AnnotationAssertion(rdfs:label "cranial appendage") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (nephridium) AnnotationAssertion(Annotation( ) "An exceretory tubule that usually opens to the exterior by a nephridiopore. The inner end of the tubule may be blind, ending in flame cells (protonephridium) or may open into the coelom through a ciliated funnel (metanephridium).") AnnotationAssertion( ) AnnotationAssertion( "BTO:0000923") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006972") AnnotationAssertion(rdfs:label "nephridium") SubClassOf( ) # Class: (protonephridium) AnnotationAssertion(Annotation( ) "A network of dead-end tubules lacking internal openings found in the Phylums Platyhelminthes, kinorhyncha and Rotifera.") AnnotationAssertion( ) AnnotationAssertion( "BILA:0000126") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006973") AnnotationAssertion(rdfs:comment "The ends are called flame cells (if cilliated) or solenocytes (if flagellated); they function in osmoregulation and ionoregulation. The terminal cells are located at the blind end of the protonephridium. Each cell has one or more cilia and their beating inside the protonephridial tube creates an outward going current and hence a partial pressurization in the blind of the tube. Because of this pressurization drives waste fluids from the inside of the animal, they are pulled through small perforations in the terminal cells and into the protonephridium. The perforations in the terminal cell are large enough for small molecules to pass, but larger proteins are retained within the animal. From the bottom of the protonephridium the solutes are led through the tube, formed by the canal cells, and exits the animal from a small opening formed by the nephridiopore. Selective reabsorption of useful molecules by the canal cells occurs as the solutes pass down the tubule. Protonephridia are generally found in basal organisms such as flatworms. Protonephridia likely first arose as a way to cope with a hypotonic environment by removing excess water from the organism (osmoregulation). Their use as excretory/ionoregulatory structures likely arose secondarily") AnnotationAssertion(rdfs:label "protonephridium") SubClassOf( ) # Class: (metanephridium) AnnotationAssertion(Annotation( ) "A type of excretory gland or nephridium found in many types of invertebrates such as Annelids, Arthropods and Molluscs. It typically consists of a ciliated funnel opening into the body cavity or coelom connected to a duct which may be variously glandularized, folded or expanded (vesiculate) and which typically opens to the organism's exterior. These ciliated tubules pump water carrying surplus ions, metabolic waste, toxins from food, and useless hormones out of the organism through openings known as nephrostomes. This waste is passed out of the body at the nephridiopore. The primary urine produced by filtration of blood (or a similar functioning fluid) is modified into secondary urine through selective reabsorption by the cells lining the metanephridium. In many earthworms the nephridial ducts open into the digestive tract instead, a condition known as enteronephry.") AnnotationAssertion( ) AnnotationAssertion( "BILA:0000127") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006974") AnnotationAssertion(rdfs:label "metanephridium") SubClassOf( ) # Class: (peptonephridium) AnnotationAssertion(Annotation( "BTO:0004280") "Organs opening into the buccal cavity of pharynx (supposedly modified nephridia) of invertebrates.") AnnotationAssertion( "BTO:0004280") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0004280") "esophageal appendage") AnnotationAssertion(Annotation( "BTO:0004280") "oesophageal appendage") AnnotationAssertion( "UBERON:0006976") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "peptonephridium") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (anatomical point) AnnotationAssertion(Annotation( ) Annotation( "FMA:9658") "Non-material anatomical entity of zero dimension, which forms a boundary of an anatomical line or surface.") AnnotationAssertion( "AAO:0010266") AnnotationAssertion( "AEO:0000009") AnnotationAssertion( "BILA:0000009") AnnotationAssertion( "CARO:0000009") AnnotationAssertion( "EHDAA2:0003009") AnnotationAssertion( "FMA:9658") AnnotationAssertion( "TAO:0001839") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006983") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "anatomical point") SubClassOf( ) # Class: (anatomical surface) AnnotationAssertion(Annotation( "CARO:0001002") "A two dimensional anatomical structure that is the boundary between an anatomical structure and an anatomical substance, an anatomical space or the organism's environment. Examples include the surface of your skin, the surface of the lining of your gut; the surface of the endothelium of you aorta that is in contact with blood.n.") AnnotationAssertion( ) AnnotationAssertion( "BILA:0000010") AnnotationAssertion( "CARO:0001002") AnnotationAssertion( "EHDAA2_RETIRED:0003192") AnnotationAssertion( "FMA:24137") AnnotationAssertion( "NCIT:C34022") AnnotationAssertion(Annotation( "ncithesaurus:Anatomic_Surface") "UMLS:C1515977") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0006984") AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "Old definition: 'Non-material anatomical entity of two dimensions, that is demarcated by anatomical lines or points on the external or internal surfaces of anatomical structures.' Note, in the new definition, the space referred to is not necessarily an anatomical space. It may be the outside of an organism.") AnnotationAssertion(rdfs:label "anatomical surface") SubClassOf(Annotation( "via morphological boundary in CARO") ) # Class: (cardiogenic splanchnic mesoderm) AnnotationAssertion(Annotation( ) Annotation( ) Annotation( "XAO:0000235") "The splanchnic mesoderm in the cardiogenic region where the heart develops; it gives rise to endocardial heart tubes that fuse to form the primordial cardiac tube, the heart primordium[web]. Two migratory heart primordia that move ventrally during the course of neurulation, and then fuse[XAO].") AnnotationAssertion( "consider FBbt:00005541 ! cardiogenic mesoderm") AnnotationAssertion( "review EHDAA2 placement") AnnotationAssertion( ) AnnotationAssertion( "AAO:0011021") AnnotationAssertion( "BILA:0000051") AnnotationAssertion( "EFO:0000315") AnnotationAssertion( "EHDAA2:0000214") AnnotationAssertion( "EHDAA:385") AnnotationAssertion( "FMA:293143") AnnotationAssertion( "VHOG:0001641") AnnotationAssertion( "XAO:0000235") AnnotationAssertion(Annotation( "EHDAA2:0000214") "cardiogenic splanchnopleure") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "XAO:0000235") "cardiac mesoderm") AnnotationAssertion(Annotation( ) "cardiogenic mesoderm") AnnotationAssertion(Annotation( ) "cardiogenic region") AnnotationAssertion(Annotation( "XAO:0000235") "heart primordia") AnnotationAssertion( "UBERON:0007005") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "cardiogenic splanchnic mesoderm") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete blastomere) AnnotationAssertion(Annotation( ) "A type of cell produced by division of the egg after fertilization.") AnnotationAssertion( "CL:0000353") AnnotationAssertion( "BILA:0000052") AnnotationAssertion( "FMA:72551") AnnotationAssertion( "VHOG:0001221") AnnotationAssertion( "XAO:0003016") AnnotationAssertion( "ZFA:0000093") AnnotationAssertion( ) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007006") AnnotationAssertion(rdfs:label "obsolete blastomere") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (cleaving embryo) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "Organism at the cleavage stage.") AnnotationAssertion( "BILA:0000058") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007010") AnnotationAssertion(rdfs:label "cleaving embryo") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (sexually immature organism) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A multicellular organism that is at the juvenile stage.") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0002047") Annotation( "TAO"^^xsd:string) Annotation( "TAO:wd"^^xsd:string) "Whole organism that is not fully grown or sexually mature.[TAO]") AnnotationAssertion( "juvenile") AnnotationAssertion( ) AnnotationAssertion( "BILA:0000076") AnnotationAssertion( "TAO:0002047") AnnotationAssertion(Annotation( "BILA:0000076") "juvenile organism") AnnotationAssertion(Annotation( "TAO:0002047") Annotation( ) "juveniles") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007021") AnnotationAssertion(rdfs:label "sexually immature organism") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (adult organism) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A multicellular organism that existence_ends_with a post-juvenile adult stage and existence_starts_with a post-juvenile adult stage.") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0002046") Annotation( "TAO"^^xsd:string) Annotation( "TAO:wd"^^xsd:string) "Whole organism that is fully grown or sexually mature.[TAO]") AnnotationAssertion( "adult") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BILA:0000078") AnnotationAssertion( "FBbt:00003004") AnnotationAssertion( "HAO:0000087") AnnotationAssertion( "NCIT:C17600") AnnotationAssertion( "TAO:0002046") AnnotationAssertion(Annotation( "ncithesaurus:Adult") "UMLS:C0001675") AnnotationAssertion( "galen:Adult") AnnotationAssertion(Annotation( "TAO:0002046") Annotation( ) "adults") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007023") AnnotationAssertion(rdfs:label "adult organism") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (presumptive gut) AnnotationAssertion(Annotation( "NCBIBook:NBK10107") "The endodermal cells generate only the lining of the digestive tube and its glands; mesodermal mesenchyme cells will surround this tube to provide the muscles for peristalsis") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BILA:0000084") AnnotationAssertion( "NCIT:C34268") AnnotationAssertion(Annotation( "ncithesaurus:Primordial_Gut") "UMLS:C1514442") AnnotationAssertion( "future digestive tract") AnnotationAssertion( "future digestive tube") AnnotationAssertion( "future gut") AnnotationAssertion( "primitive gut") AnnotationAssertion( "uberon") AnnotationAssertion( "embryonic digestive tube") AnnotationAssertion( "primordial digestive tube") AnnotationAssertion( "primordial gut") AnnotationAssertion( "UBERON:0007026") AnnotationAssertion(rdfs:label "presumptive gut") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (mechanosensory system) AnnotationAssertion( "BILA:0000142") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007037") AnnotationAssertion(rdfs:label "mechanosensory system") SubClassOf( ) # Class: (obsolete visceral musculature) AnnotationAssertion( "BILA:0000132") AnnotationAssertion( "UBERON:0001135") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007094") AnnotationAssertion(rdfs:comment "obsolete as it was not clear whether the class was intended in the insect or vertebrate sense of the term. For vertebrates consider the term smooth muscle [https://github.com/obophenotype/insect_neuroanatomy_ontology/issues/8]") AnnotationAssertion(rdfs:label "obsolete visceral musculature") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (somatic musculature) AnnotationAssertion( "BILA:0000133") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007095") AnnotationAssertion(rdfs:label "somatic musculature") SubClassOf( ) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (mandibular neural crest) AnnotationAssertion(Annotation( "ZFA:0007064") "Cranial neural crest that migrates into the mandibular arch.") AnnotationAssertion( "TAO:0007064") AnnotationAssertion( "XAO:0000024") AnnotationAssertion( "ZFA:0007064") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007098") AnnotationAssertion(rdfs:label "mandibular neural crest") SubClassOf(Annotation( "ZFA"^^xsd:string) ) SubClassOf(Annotation( "ZFA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (hyoid neural crest) AnnotationAssertion(Annotation( "ZFA:0007065") "Cranial neural crest that migrates into the hyoid arch.") AnnotationAssertion( "TAO:0007065") AnnotationAssertion( "XAO:0000025") AnnotationAssertion( "ZFA:0007065") AnnotationAssertion(Annotation( "XAO:0000025") "hyoid crest") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007099") AnnotationAssertion(rdfs:label "hyoid neural crest") SubClassOf(Annotation( "ZFA"^^xsd:string) ) SubClassOf(Annotation( "ZFA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (primary circulatory organ) AnnotationAssertion(Annotation( "GO:0007507") "A hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood or analogs[GO,modified].") AnnotationAssertion( "note we reserve the subclass 'heart' from the vertebrate multi-chambered heart. 'The first heart-like organ is believed to have appeared 500my ago in an ancestral bilaterian'. Amniotes: four-chambered heart. Amphibians: two atria, one ventricle, pulmonary; fish: single atrium and ventricle; amphioxus: tubular, non-striated, closed, unidirectional; ascidians: tubular, striated, open, bidirectional; arthropods: tubular, open; C elegans: contractile pharynx; Cnideria: striated muscle cells associated with gastrodermis") AnnotationAssertion( ) AnnotationAssertion( "FBbt:00003154") AnnotationAssertion( "SPD:0000130") AnnotationAssertion( "TADS:0000147") AnnotationAssertion(Annotation( ) "dorsal tube") AnnotationAssertion(Annotation( "GO:0007507") "heart") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FBbt:00003154") "adult heart") AnnotationAssertion( "UBERON:0007100") AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "Gene notes: Bmp, Nkx, Gata") AnnotationAssertion(rdfs:label "primary circulatory organ") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses( ) # Class: (vitelline duct) AnnotationAssertion(Annotation( ) "A long narrow tube that joins the yolk-sac to the midgut lumen of the developing fetus.") AnnotationAssertion( "In humans, it appears at the end of the fourth week, when the yolk-sac presents the appearance of a small pear-shaped vesicle (the umbilical vesicle). The vesicle can be seen in the afterbirth as a small, somewhat oval-shaped body whose diameter varies from 1 mm to 5 mm. It is situated between the amnion and the chorion and may lie on or at a varying distance from the placenta. Generally, the duct fully obliterates (narrows and disappears) during the seventh week, but a failure of the duct to close is termed a vitelline fistula. This results in discharge of meconium from the umbilicus. About two per cent of fetuses exhibit a type of vitelline fistula characterized by persistence of the proximal part of the vitelline duct as a diverticulum protruding from the small intestine, Meckel's diverticulum, which is situated about two feet above the ileocecal junction, and may be attached by a fibrous cord to the abdominal wall at the umbilicus. Sometimes a narrowing of the lumen of the ileum is seen opposite the site of attachment of the duct") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:26139") AnnotationAssertion( "GAID:1314") AnnotationAssertion( "MESH:A16.254.891") AnnotationAssertion( "uberon") AnnotationAssertion( "ductus vitellinus") AnnotationAssertion(Annotation( ) "embryonic yolk stalk") AnnotationAssertion(Annotation( ) "omphalomesenteric duct") AnnotationAssertion(Annotation( "MESH:A16.254.891") "omphalomesenteric duct") AnnotationAssertion(Annotation( ) "yolk duct") AnnotationAssertion(Annotation( ) "yolk-stalk") AnnotationAssertion( "UBERON:0007105") AnnotationAssertion(rdfs:label "vitelline duct") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/8/8c/Gray30.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (chorionic villus) AnnotationAssertion(Annotation( ) Annotation( "BTO:0001161") "One of the minute vascular projections of the fetal chorion that combines with maternal uterine tissue to form the placenta.") AnnotationAssertion( "The mouse and human placentas have labyrinthine and villous types of interdigitation between maternal and fetal tissues, respectively") AnnotationAssertion( "The bulk of the villi consist of connective tissues in which blood vessels are found. Most of the cells in the connective tissue core of the villi are fibroblasts. Macrophages known as Hofbauer cells are also present.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0001161") AnnotationAssertion( "EHDAA2:0004717") AnnotationAssertion( "MESH:A16.254.403.473.200") AnnotationAssertion( "NCIT:C34125") AnnotationAssertion(Annotation( "ncithesaurus:Chorionic_Villus") "UMLS:C0008508") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "MESH:A16.254.403.473.200") Annotation( ) "chorionic villi") AnnotationAssertion(Annotation( ) "chorionic villous") AnnotationAssertion(Annotation( "GAID:1300") "chorionic villus") AnnotationAssertion(Annotation( ) "embryonic part of placenta") AnnotationAssertion(Annotation( ) "embryonic placenta") AnnotationAssertion(Annotation( ) "fetal part of placenta") AnnotationAssertion(Annotation( ) "fetal placenta") AnnotationAssertion(Annotation( "GAID:1300") Annotation( ) "placental villi") AnnotationAssertion( "placental villous") AnnotationAssertion(Annotation( "GAID:1300") "placental villus") AnnotationAssertion( "villous chorion") AnnotationAssertion( "villous of placenta") AnnotationAssertion( "UBERON:0007106") AnnotationAssertion(rdfs:label "chorionic villus") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/1/1e/Gray29.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "BTO"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "MP-def") ObjectSomeValuesFrom( )) # Class: (vernix caseosa) AnnotationAssertion(Annotation( ) Annotation( "MESH:A12.200.946") "An unctuous substance composed of sebum and desquamated epithelial cells, which covers the skin of the fetus.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "GAID:1174") AnnotationAssertion( "MESH:D014708") AnnotationAssertion( "NCIT:C34328") AnnotationAssertion(Annotation( "ncithesaurus:Vernix_Caseosa") "UMLS:C0042541") AnnotationAssertion( "uberon") AnnotationAssertion( "vernix") AnnotationAssertion(Annotation( "MESH:A12.200.946") "vernix caseosa") AnnotationAssertion( "UBERON:0007108") AnnotationAssertion(rdfs:label "vernix caseosa") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "MP"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (meconium) AnnotationAssertion(Annotation( "BTO:0000838") "A dark greenish mass that accumulates in the bowel during fetal life and is discharged shortly after birth.") AnnotationAssertion( "BTO:0000838") AnnotationAssertion( "ncithesaurus:Meconium") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007109") AnnotationAssertion(rdfs:label "meconium") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (Douglas' pouch) AnnotationAssertion(Annotation( ) "The rectouterine pouch (or rectouterine excavation, rectovaginal, Ehrhardt-Cole Recess or Pouch of Douglas) is the extension of the peritoneal cavity between the rectum and back wall of the uterus in the female human body. The rectouterine pouch is used in the treatment of end-stage renal failure in patients who are treated by peritoneal dialysis. The tip of the dialysis catheter is placed into the deepest point of the pouch. In women it is the deepest point of the peritoneal cavity, posterior to (behind) the uterus and anterior to (in front of) rectum. (The pouch on the other side of the uterus is the vesicouterine excavation. ) It is near the posterior fornix of the vagina. In men, the region corresponding to the rectouterine pouch is the rectovesical excavation, which lies between the urinary bladder and rectum. (There is no equivalent to the vesicouterine excavation.).") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:14728") AnnotationAssertion( "GAID:20") AnnotationAssertion( "MESH:A01.047.025.600.225") AnnotationAssertion( "NCIT:C33447") AnnotationAssertion(Annotation( "ncithesaurus:Recto-Vaginal_Pouch") "UMLS:C1514801") AnnotationAssertion(Annotation( "FMA:14728") "excavatio recto-uterina") AnnotationAssertion(Annotation( "FMA:14728") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "excavatio rectouterina") AnnotationAssertion(Annotation( "FMA:14728") "pouch of douglas") AnnotationAssertion(Annotation( "FMA:14728") "recto-uterine pouch") AnnotationAssertion(Annotation( "FMA:14728") Annotation( "MESH:A01.047.025.600.225") "rectouterine pouch") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "cavum Douglassi") AnnotationAssertion(Annotation( "MESH:A01.047.025.600.225") "cul de sac of douglas") AnnotationAssertion(Annotation( "MESH:A01.047.025.600.225") "cul-de-sac of douglsa") AnnotationAssertion(Annotation( "MESH:A01.047.025.600.225") "douglas cul-de-sac") AnnotationAssertion(Annotation( "MESH:A01.047.025.600.225") "douglas pouch") AnnotationAssertion(Annotation( "MESH:A01.047.025.600.225") "douglas' cul de sac") AnnotationAssertion(Annotation( "MESH:A01.047.025.600.225") "douglas' cul-de-sac") AnnotationAssertion(Annotation( "MESH:A01.047.025.600.225") "douglas' pouch") AnnotationAssertion(Annotation( ) Annotation( ) "excavatio rectouterina") AnnotationAssertion(Annotation( ) Annotation( ) "fossa Douglasi") AnnotationAssertion(Annotation( ) "recto-uterine pouch") AnnotationAssertion(Annotation( ) "rectouterine excavation") AnnotationAssertion(Annotation( "FMA:14728") "rectouterine space") AnnotationAssertion( "UBERON:0007111") AnnotationAssertion(rdfs:label "Douglas' pouch") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/5/51/WeiblichesBeckenMedian.gif"^^xsd:anyURI) SubClassOf( ) # Class: (deciduous tooth) AnnotationAssertion(Annotation( ) "One of the first set of teeth in the growth development of humans and many other mammals[WP].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:55655") AnnotationAssertion( "GAID:1266") AnnotationAssertion( "MESH:A14.254.860.700") AnnotationAssertion( "NCIT:C33745") AnnotationAssertion(Annotation( "ncithesaurus:Temporary_Tooth") "UMLS:C0040455") AnnotationAssertion(Annotation( "FMA:55655") "primary tooth") AnnotationAssertion(Annotation( "FMA:55655") "temporary tooth") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "dentes decidui") AnnotationAssertion( "UBERON:0007115") AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "GAT in FMA.") AnnotationAssertion(rdfs:label "deciduous tooth") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/9/97/Deciduous_teeth_by_David_Shankbone.jpg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses( ) # Class: (primary dentition) AnnotationAssertion(Annotation( "MESH:A14.254.245") "The set of teeth first in order or time of development that will be replaced by permanent dentition upon their loss.") AnnotationAssertion( "FMA:75151") AnnotationAssertion( "GAID:1252") AnnotationAssertion( "MESH:A14.254.245") AnnotationAssertion(Annotation( "FMA:75151") "baby teeth") AnnotationAssertion(Annotation( "FMA:75151") "deciduous teeth") AnnotationAssertion(Annotation( "FMA:75151") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "dentes decidui") AnnotationAssertion(Annotation( "FMA:75151") "milk teeth") AnnotationAssertion(Annotation( "FMA:75151") "primary teeth") AnnotationAssertion(Annotation( "GAID:1266") "primary teeth") AnnotationAssertion(Annotation( "FMA:75151") "set of deciduous teeth") AnnotationAssertion(Annotation( "FMA:75151") "set of primary teeth") AnnotationAssertion( "tooth of primary dentition") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "GAID:1252") "deciduous dentition") AnnotationAssertion( "UBERON:0007116") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "primary dentition") SubClassOf( ) # Class: (umbilicus) AnnotationAssertion(Annotation( ) Annotation( "MESH:A01.047.849") "The pit in the center of the abdominal wall marking the point where the umbilical cord entered in the fetus.") AnnotationAssertion( "omphalo") AnnotationAssertion( "umbilical") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:61584") AnnotationAssertion( "GAID:29") AnnotationAssertion( "MESH:A01.047.849") AnnotationAssertion( "NCIT:C77533") AnnotationAssertion(Annotation( "ncithesaurus:Umbilicus") "UMLS:C0041638") AnnotationAssertion( "galen:Umbilicus") AnnotationAssertion(Annotation( "FMA:61584") "navel") AnnotationAssertion(Annotation( "FMA:61584") "umbilical part of abdomen") AnnotationAssertion(Annotation( "FMA:61584") "umbilical region") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007118") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "umbilicus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (neck of femur) AnnotationAssertion(Annotation( ) "The femur neck or neck of the femur is a flattened pyramidal process of bone, connecting the femoral head with the femoral shaft, and forming with the latter a wide angle opening medialward.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:42385") AnnotationAssertion( "GAID:201") AnnotationAssertion( "MESH:A02.835.232.500.247.510") AnnotationAssertion( "NCIT:C61563") AnnotationAssertion(Annotation( "ncithesaurus:Femoral_Neck") "UMLS:C0015815") AnnotationAssertion( "galen:NeckOfFemur") AnnotationAssertion(Annotation( "FMA:42385") "femoral neck") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "collum femoris") AnnotationAssertion(Annotation( ) "femur neck") AnnotationAssertion(Annotation( ) "neck of the femur") AnnotationAssertion( "UBERON:0007119") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "neck of femur") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/9/97/Gray243.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (premolar tooth) AnnotationAssertion(Annotation( ) "The premolar teeth or bicuspids are transitional teeth located between the canine and molar teeth.") AnnotationAssertion(Annotation( "Although there are a few exceptions, the dental formula for the great majority of cricetids is 1.0.0.3") Annotation( ) ) AnnotationAssertion( "In humans, there are two premolars per quadrant, making eight premolars total in the mouth. They have at least two cusps. Premolars can be considered as a 'transitional tooth' during chewing, or mastication. It has properties of both the anterior canines and posterior molars, and so food can be transferred from the canines to the premolars and finally to the molars for grinding, instead of directly from the canines to the molars. The premolars in humans are the maxillary first premolar, maxillary second premolar, mandibular first premolar, and the mandibular second premolar. There is always one large buccal cusp, especially so in the mandibular first premolar. The lower second premolar almost always presents with two lingual cusps. Premolar teeth by definition are permanent teeth distal to the canines preceded by deciduous molars. In primitive mammals there are four premolars per quadrant. The most mesial two have been lost in Catarrhines. Paleontologists refer to human premolars as Pm3 and Pm4") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:55637") AnnotationAssertion( "GAID:1261") AnnotationAssertion( "MESH:A14.254.860.150") AnnotationAssertion( "NCIT:C32201") AnnotationAssertion(Annotation( "ncithesaurus:Bicuspid_Tooth") "UMLS:C1704302") AnnotationAssertion(Annotation( "FMA:55637") "secondary premolar tooth") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "bicuspid") AnnotationAssertion(Annotation( ) "bicuspid teeth") AnnotationAssertion(Annotation( ) "bicuspid tooth") AnnotationAssertion(Annotation( ) "bicuspids") AnnotationAssertion(Annotation( ) "biscuspid") AnnotationAssertion(Annotation( ) "dens premolaris") AnnotationAssertion(Annotation( ) "dentes premolares") AnnotationAssertion(Annotation( ) Annotation( ) "dentes premolares") AnnotationAssertion(Annotation( ) "mandibular bicuspid") AnnotationAssertion(Annotation( ) "maxillary bicuspid") AnnotationAssertion(Annotation( ) "maxillary premolar") AnnotationAssertion(Annotation( ) "pm3 (dentistry)") AnnotationAssertion(Annotation( ) "praemolares") AnnotationAssertion(Annotation( ) "premolar") AnnotationAssertion(Annotation( ) "premolar teeth") AnnotationAssertion(Annotation( ) "premolar tooth") AnnotationAssertion(Annotation( ) "premolars") AnnotationAssertion(Annotation( ) "præmolares") AnnotationAssertion( "UBERON:0007120") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "premolar tooth") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/6/6c/Gray1003.png"^^xsd:anyURI) SubClassOf( ) # Class: (skin nerve field) AnnotationAssertion(Annotation( ) "A zone of skin that is mainly innervated by a single sensory nerve. A nerve field innervated by exactly one dorsal root is called a dermatome.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:80301") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "dermatome") AnnotationAssertion(Annotation( ) "dermatome segment of skin") AnnotationAssertion(Annotation( ) "dermatomic area") AnnotationAssertion(Annotation( ) "peripheral nerve field") AnnotationAssertion( "UBERON:0007121") AnnotationAssertion(rdfs:comment "Examples: V1, V2 and V3 distributions of the trigeminal nerve; the zone of skin innervated by S2") AnnotationAssertion(rdfs:label "skin nerve field") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/9/97/Dermatomes_and_cutaneous_nerves_-_posterior.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pharyngeal pouch 1) AnnotationAssertion(Annotation( ) Annotation( "ISBN:0124020607") Annotation( "VHOG:0000970") "A pharyngeal pouch that is between pharyngeal arches 1 and 2.") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000970") Annotation( "VHOG"^^xsd:string) Annotation( ) ". [][VHOG]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000970") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "DOI:10.1016/j.semcdb.2010.01.022 Grevellec A, Tucker AS, The pharyngeal pouches and clefts: development, evolution, structure and derivatives. Seminars in Cell and Developmental Biology (2010)") "In all jawed vertebrates the first arch forms the jaw, while the second arch forms the hyoid apparatus. These two arches are separated by the first pharyngeal pouch and cleft.[well established][VHOG]") AnnotationAssertion(Annotation( "WP"^^xsd:string) "The endoderm lines the future auditory tube (Pharyngotympanic Eustachian tube) , middle ear, mastoid antrum, and inner layer of the tympanic membrane. & origin of Mandibular nerve & Maxillary artery") AnnotationAssertion(Annotation( "EHDAA2"^^xsd:string) "we use adjacency relations rather than part_of, as in EHDAA2.") AnnotationAssertion( "UBERON:0005718") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0011114") AnnotationAssertion( "EFO:0003631") AnnotationAssertion( "EHDAA2:0000016") AnnotationAssertion( "EMAPA:16124") AnnotationAssertion( "EMAPA:16125") AnnotationAssertion( "FMA:295668") AnnotationAssertion( "NCIT:C34176") AnnotationAssertion( "TAO:0001128") AnnotationAssertion(Annotation( "ncithesaurus:First_Pharyngeal_Pouch") "UMLS:C0231068") AnnotationAssertion( "VHOG:0000555") AnnotationAssertion( "VHOG:0000970") AnnotationAssertion( "XAO:0000102") AnnotationAssertion( "ZFA:0001128") AnnotationAssertion(Annotation( "EHDAA2:0000013") "1st arch branchial pouch") AnnotationAssertion(Annotation( "EHDAA2:0000016") "1st arch branchial pouch endoderm") AnnotationAssertion(Annotation( "EHDAA2:0000016") "1st arch pouch endoderm") AnnotationAssertion( "1st branchial pouch") AnnotationAssertion(Annotation( "VHOG:0000555") "1st pharyngeal pouch endoderm") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "first arch pharyngeal pouch") AnnotationAssertion(Annotation( "XAO:0000102") "first visceral pouch") AnnotationAssertion( "hyomandibular pouch") AnnotationAssertion(Annotation( "ZFA:0001128") Annotation( ) "pharyngeal pouches 1") AnnotationAssertion(Annotation( "XAO:0000102") "visceral pouch 1") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "VHOG:0000970") "first pharyngeal pouch") AnnotationAssertion( "UBERON:0007122") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "pharyngeal pouch 1") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) # Class: (pharyngeal pouch 2) AnnotationAssertion(Annotation( ) Annotation( "ISBN:0124020607") "A pharyngeal puch that is between the pharyngeal arches 2 and 3.") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000967") Annotation( "VHOG"^^xsd:string) Annotation( ) "A pouch that is situated between the 2nd and 3rd pharyngeal arch. [ISBN:0124020607][VHOG]") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0011115") Annotation( "AAO"^^xsd:string) Annotation( "ISBN:0-226-55763-4") "Second of the pharyngeal (endodermal) evaginations between the visceral arches from which the Eustachian tube is derived; pouches 2-4 open as gill slits.[AAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000967") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "DOI:10.1111/j.1469-7580.2005.00472.x Graham A, Okabe M and Quinlan R, The role of the endoderm in the development and evolution of the pharyngeal arches. J Anat (2005)") "A conserved feature of all vertebrate embryos is the presence of a series of bulges on the lateral surface of the head, the pharyngeal arches; it is within these structures that the nerves, muscles and skeletal components of the pharyngeal apparatus are laid down. The pharyngeal arches are separated by endodermal outpocketings, the pharyngeal pouches.[well established][VHOG]") AnnotationAssertion( "the dorsal elongation of the second pouch endoderm of all mammals, with the exception of rodents, gives rise to the epithelial lining of palatine tonsils; in rodents, the ventral portion of the second pouch appears to degenerate whereas the remaining part is incorporated into the lateral border of the pharynx; it appears that rodents no longer require tonsils as their function is carried out by the NALT (Nose/Nasal-Associated Lymphoid Tissue) system in the upper respiratory tract.") AnnotationAssertion(Annotation( "WP"^^xsd:string) "Contributes to the middle ear, epithelial lining of Crypts (spaces) of the palatine tonsils, supplied by the facial nerve") AnnotationAssertion( "UBERON:0005715") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0011115") AnnotationAssertion( "EFO:0003633") AnnotationAssertion( "EHDAA2:0000058") AnnotationAssertion( "EMAPA:16275") AnnotationAssertion( "EMAPA:16276") AnnotationAssertion( "FMA:295676") AnnotationAssertion( "NCIT:C34289") AnnotationAssertion( "RETIRED_EHDAA2:0000060") AnnotationAssertion( "TAO:0001130") AnnotationAssertion(Annotation( "ncithesaurus:Second_Pharyngeal_Pouch") "UMLS:C0231069") AnnotationAssertion( "VHOG:0000561") AnnotationAssertion( "VHOG:0000967") AnnotationAssertion( "XAO:0000247") AnnotationAssertion( "ZFA:0001130") AnnotationAssertion(Annotation( "RETIRED_EHDAA2:0000060") "2nd arch branchial pouch") AnnotationAssertion(Annotation( "EHDAA2:0000061") "2nd arch branchial pouch endoderm") AnnotationAssertion(Annotation( "EHDAA2:0000058") "2nd arch pouch endoderm") AnnotationAssertion( "2nd branchial pouch") AnnotationAssertion(Annotation( "VHOG:0000561") "2nd pharyngeal pouch endoderm") AnnotationAssertion(Annotation( "ZFA:0001130") Annotation( ) "pharyngeal pouches 2") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "second arch pharyngeal pouch") AnnotationAssertion(Annotation( "XAO:0000247") "second visceral pouch") AnnotationAssertion(Annotation( "XAO:0000247") "visceral pouch 2") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "VHOG:0000967") "second pharyngeal pouch") AnnotationAssertion( "UBERON:0007123") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "pharyngeal pouch 2") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) # Class: (pharyngeal pouch 3) AnnotationAssertion(Annotation( ) Annotation( ) Annotation( "ISBN:0124020607") "A pharyngeal pouch that between pharyngeal arches 3 and 4.") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000966") Annotation( "VHOG"^^xsd:string) Annotation( ) "A pouch that is situated between the 3rd and 4th pharyngeal arch. [ISBN:0124020607][VHOG]") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0011116") Annotation( "AAO"^^xsd:string) Annotation( "ISBN:0-226-55763-4") "Third of the pharyngeal (endodermal) evaginations between the visceral arches from which the Eustachian tube is derived; pouches 2-4 open as gill slits.[AAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000966") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "DOI:10.1111/j.1469-7580.2005.00472.x Graham A, Okabe M and Quinlan R, The role of the endoderm in the development and evolution of the pharyngeal arches. J Anat (2005)") "A conserved feature of all vertebrate embryos is the presence of a series of bulges on the lateral surface of the head, the pharyngeal arches; it is within these structures that the nerves, muscles and skeletal components of the pharyngeal apparatus are laid down. The pharyngeal arches are separated by endodermal outpocketings, the pharyngeal pouches.[well established][VHOG]") AnnotationAssertion(Annotation( "WP"^^xsd:string) "The third pouch possesses Dorsal and Ventral wings. Derivatives of the dorsal wings include the inferior parathyroid glands, while the ventral wings fuse to form the cytoreticular cells of the thymus. The main nerve supply to the derivatives of this pouch is Cranial Nerve IX, glossopharyngeal nerve") AnnotationAssertion( "UBERON:0005716") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0011116") AnnotationAssertion( "EFO:0003634") AnnotationAssertion( "EHDAA2:0000077") AnnotationAssertion( "EMAPA:16586") AnnotationAssertion( "FMA:295682") AnnotationAssertion( "NCIT:C34311") AnnotationAssertion( "RETIRED_EHDAA2:0000076") AnnotationAssertion( "TAO:0001131") AnnotationAssertion(Annotation( "ncithesaurus:Third_Pharyngeal_Pouch") "UMLS:C0231070") AnnotationAssertion( "VHOG:0000966") AnnotationAssertion( "VHOG:0001030") AnnotationAssertion( "XAO:0000251") AnnotationAssertion( "ZFA:0001131") AnnotationAssertion(Annotation( "RETIRED_EHDAA2:0000076") "3rd arch branchial pouch") AnnotationAssertion(Annotation( "EHDAA2:0000077") "3rd arch branchial pouch endoderm") AnnotationAssertion( "3rd branchial pouch") AnnotationAssertion(Annotation( "VHOG:0001030") "3rd pharyngeal pouch endoderm") AnnotationAssertion(Annotation( "ZFA:0001131") Annotation( ) "pharyngeal pouches 3") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "third arch pharyngeal pouch") AnnotationAssertion(Annotation( "XAO:0000251") "third visceral pouch") AnnotationAssertion(Annotation( "XAO:0000251") "visceral pouch 3") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "VHOG:0000966") "third pharyngeal pouch") AnnotationAssertion( "UBERON:0007124") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "pharyngeal pouch 3") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) # Class: (pharyngeal pouch 4) AnnotationAssertion(Annotation( ) Annotation( ) Annotation( "ISBN:0124020607") "A pharyngeal pouch between pharyngeal arch 4 and arch 5 or 6 (a fifth arch never establishes in amniotes).") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000971") Annotation( "VHOG"^^xsd:string) Annotation( ) "A pouch that is situated between the 4th and 5th pharyngeal arch. [ISBN:0124020607][VHOG]") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0011117") Annotation( "AAO"^^xsd:string) Annotation( "ISBN:0-226-55763-4") "Fourth of the pharyngeal (endodermal) evaginations between the visceral arches from which the Eustachian tube is derived; pouches 2-4 open as gill slits.[AAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000971") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "DOI:10.1111/j.1469-7580.2005.00472.x Graham A, Okabe M and Quinlan R, The role of the endoderm in the development and evolution of the pharyngeal arches. J Anat (2005)") "A conserved feature of all vertebrate embryos is the presence of a series of bulges on the lateral surface of the head, the pharyngeal arches; it is within these structures that the nerves, muscles and skeletal components of the pharyngeal apparatus are laid down. The pharyngeal arches are separated by endodermal outpocketings, the pharyngeal pouches.[well established][VHOG]") AnnotationAssertion(Annotation( "MP"^^xsd:string) "Derivatives include: superior parathyroid glands and ultimobranchial body which forms the parafollicular C-Cells of the thyroid gland. Musculature and cartilage of larynx (along with the sixth pharyngeal pouch)[WP] in most mammals, excluding rodents, the dorsal part of each fourth pouch develops into a superior parathyroid gland (parathyroid IV), which lies on the dorsal surface of the thyroid gland (the parathyroid glands derived from the third pouches descend with the thymus and are carried to a more inferior position than the parathyroid glands that are derived from the fourth pouches); the elongated ventral part of each fourth pouch develops into the ultimopharyngeal body, which fuses with the thyroid gland, giving rise to the calcitonin-producing parafollicular or C-cells of the thyroid gland. In the mouse, but also in the rat and hamster, the dorsal fourth pouch does not generate a parathyroid. Thus, rodents develop only one pair of parathyroid glands.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0011117") AnnotationAssertion( "EFO:0003637") AnnotationAssertion( "EHDAA2:0000091") AnnotationAssertion( "EMAPA:16766") AnnotationAssertion( "FMA:295688") AnnotationAssertion( "NCIT:C34181") AnnotationAssertion( "RETIRED_EHDAA2:0000090") AnnotationAssertion( "TAO:0001134") AnnotationAssertion(Annotation( "ncithesaurus:Fourth_Pharyngeal_Pouch") "UMLS:C0231071") AnnotationAssertion( "VHOG:0000578") AnnotationAssertion( "VHOG:0000971") AnnotationAssertion( "XAO:0000254") AnnotationAssertion( "ZFA:0001134") AnnotationAssertion(Annotation( "RETIRED_EHDAA2:0000090") "4th arch branchial pouch") AnnotationAssertion(Annotation( "EHDAA2:0000091") "4th arch branchial pouch endoderm") AnnotationAssertion( "4th branchial pouch") AnnotationAssertion(Annotation( "VHOG:0000578") "4th pharyngeal pouch endoderm") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "fourth arch pharyngeal pouch") AnnotationAssertion( "fourth branchial pouch") AnnotationAssertion(Annotation( "XAO:0000254") "fourth visceral pouch") AnnotationAssertion(Annotation( "ZFA:0001134") Annotation( ) "pharyngeal pouches 4") AnnotationAssertion(Annotation( "XAO:0000254") "visceral pouch 4") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "VHOG:0000971") "fourth pharyngeal pouch") AnnotationAssertion( "UBERON:0007125") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "pharyngeal pouch 4") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) # Class: (pharyngeal pouch 5) AnnotationAssertion(Annotation( "ISBN:0124020607") "A pharyngeal pouch between pharyngeal arches 5 and 6.") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0011118") Annotation( "AAO"^^xsd:string) Annotation( "ISBN:0-226-55763-4") "Fifth of the pharyngeal (endodermal) evaginations between the visceral arches.[AAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001206") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "DOI:10.1111/j.1469-7580.2005.00472.x Graham A, Okabe M, Quinlan R, The role of the endoderm in the development and evolution of the pharyngeal arches. J Anat (2005)") "A conserved feature of all vertebrate embryos is the presence of a series of bulges on the lateral surface of the head, the pharyngeal arches; it is within these structures that the nerves, muscles and skeletal components of the pharyngeal apparatus are laid down. The pharyngeal arches are separated by endodermal outpocketings, the pharyngeal pouches.[well established][VHOG]") AnnotationAssertion(Annotation( "WP"^^xsd:string) "pouches 5 and 6 are hard to distinguish. Rudimentary structure, becomes part of the fourth pouch contributing to thyroid C-cells") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0011118") AnnotationAssertion( "EFO:0003636") AnnotationAssertion( "NCIT:C34174") AnnotationAssertion( "TAO:0001133") AnnotationAssertion(Annotation( "ncithesaurus:Fifth_Pharyngeal_Pouch") "UMLS:C1517185") AnnotationAssertion( "VHOG:0001206") AnnotationAssertion( "XAO:0000255") AnnotationAssertion( "ZFA:0001133") AnnotationAssertion( "5th branchial pouch") AnnotationAssertion(Annotation( "XAO:0000255") "fifth visceral pouch") AnnotationAssertion(Annotation( "ZFA:0001133") Annotation( ) "pharyngeal pouches 5") AnnotationAssertion(Annotation( "XAO:0000255") "visceral pouch 5") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "VHOG:0001206") "5th pharyngeal pouch") AnnotationAssertion(Annotation( "VHOG:0001206") "5th visceral pouch") AnnotationAssertion(Annotation( "VHOG:0001206") "fifth pharyngeal pouch") AnnotationAssertion(Annotation( "VHOG:0001206") "fifth visceral pouch") AnnotationAssertion( "UBERON:0007126") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "pharyngeal pouch 5") SubClassOf( ) # Class: (pharyngeal pouch 6) AnnotationAssertion(Annotation( ) "A pharyngeal pouch between pharyngeal arches 6 and 7.") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0011119") Annotation( "AAO"^^xsd:string) Annotation( "ISBN:0-226-55763-4") "Sixth of the pharyngeal (endodermal) evaginations between the visceral arches.[AAO]") AnnotationAssertion(Annotation( "WP"^^xsd:string) "in humans pouches 5 and 6 are hard to distinguish.") AnnotationAssertion( "Along with the fourth pouch, contributes to the formation of the musculature and cartilage of the larynx") AnnotationAssertion( ) AnnotationAssertion( "AAO:0011119") AnnotationAssertion( "EFO:0003635") AnnotationAssertion( "TAO:0001132") AnnotationAssertion( "XAO:0000265") AnnotationAssertion( "ZFA:0001132") AnnotationAssertion( "6th arch branchial pouch") AnnotationAssertion( "6th branchial pouch") AnnotationAssertion(Annotation( "ZFA:0001132") Annotation( ) "pharyngeal pouches 6") AnnotationAssertion(Annotation( "XAO:0000265") "sixth visceral pouch") AnnotationAssertion(Annotation( "XAO:0000265") "visceral pouch 6") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007127") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "pharyngeal pouch 6") SubClassOf( ) # Class: (glomeral mesenchyme) AnnotationAssertion(Annotation( "ISBN:0815318960") "Portion of tissue that consists of the precursors of the pronephric glomus or glomerulus; derived from the medial portion of the pronephric intermediate mesoderm.") AnnotationAssertion( "XAO:0000110") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "XAO:0000110") "corpuscle") AnnotationAssertion(Annotation( "XAO:0000110") "glomerulus") AnnotationAssertion( "UBERON:0007128") AnnotationAssertion(rdfs:label "glomeral mesenchyme") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (head kidney) AnnotationAssertion(Annotation( ) Annotation( "ZFIN:ZDB-PUB-040923-1") "Teleost head kidney consists of fused bilateral lobes located in the anterior part of the kidney. It is analogous to the mammalian bone marrow and the primary site of definitive hematopoiesis[ZFA,modified].") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0000669") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "The zebrafish head kidney consists of fused bilateral lobes located in the anterior part of the kidney. It is analogous to the mammalian bone marrow and the primary site of definitive hematopoiesis. Davidson and Zon 2004.[TAO]") AnnotationAssertion(Annotation( "GO") "in GO, head kidney isa pronephros. Modified the ZFA relationships - the HK is derived from the anterior part of the pronephros and persists until adulthood") AnnotationAssertion( "BTO:0005189") AnnotationAssertion( "TAO:0000669") AnnotationAssertion( "ZFA:0000669") AnnotationAssertion(Annotation( "ZFA:0000669") "anterior kidney") AnnotationAssertion(Annotation( "ZFA:0000669") "kidney marrow") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007132") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "head kidney") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "cjm"^^xsd:string) ObjectSomeValuesFrom( )) DisjointClasses(Annotation( "lexical"^^xsd:string) ) # Class: (trunk ganglion) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Ganglion which is located in the trunk.") AnnotationAssertion( "EFO:0000901") AnnotationAssertion( "MAT:0000344") AnnotationAssertion( "MIAA:0000344") AnnotationAssertion( "TAO:0001573") AnnotationAssertion( "ZFA:0001573") AnnotationAssertion(Annotation( "MAT:0000344") "body ganglion") AnnotationAssertion(Annotation( "ZFA:0001573") Annotation( ) "trunk ganglia") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007134") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "trunk ganglion") SubClassOf( ) SubClassOf( ) # Class: (neural keel) AnnotationAssertion(Annotation( "ZFIN:ZDB-PUB-961014-576"^^xsd:string) "An intermediate stage (between the neural plate and neural rod) during the early segmentation period in the morphogenesis of the central nervous system primordium; the keel is roughly triangular shaped in cross section.") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0000131") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "An intermediate stage (between the neural plate and neural rod) during the early segmentation period in the morphogenesis of the central nervous system primordium; the keel is roughly triangular shaped in cross section. Kimmel et al, 1995.[TAO]") AnnotationAssertion( "EFO:0003497") AnnotationAssertion( "TAO:0000131") AnnotationAssertion( "ZFA:0000131") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "ZFA:0000131") "presumptive central nervous system") AnnotationAssertion( "UBERON:0007135") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "neural keel") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (rectouterine fold) AnnotationAssertion(Annotation( ) "These folds of the rectouterine excavation are named the sacrogenital or rectouterine folds. They contain a considerable amount of fibrous tissue and non-striped muscular fibers which are attached to the front of the sacrum and constitute the uterosacral ligaments.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:16533") AnnotationAssertion(Annotation( "FMA:16533") "fold of Douglas") AnnotationAssertion(Annotation( "FMA:16533") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "plica rectouterina") AnnotationAssertion(Annotation( "FMA:16533") "posterior ligament of uterus") AnnotationAssertion(Annotation( "FMA:16533") "recto-uterine fold") AnnotationAssertion(Annotation( "FMA:16533") "rectovaginal fold") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "plica rectouterina") AnnotationAssertion( "UBERON:0007136") AnnotationAssertion(rdfs:label "rectouterine fold") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/b/b5/Gray1165.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (parietal mesothelium) AnnotationAssertion(Annotation( ) "Mesothelium overs the body walls is called the parietal mesothelium.") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37714") AnnotationAssertion( "MA:0000566") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007140") AnnotationAssertion(rdfs:label "parietal mesothelium") SubClassOf( ) # Class: (visceral mesothelium) AnnotationAssertion(Annotation( ) "Mesothelium that covers the internal organs is called visceral mesothelium.") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37804") AnnotationAssertion( "MA:0000567") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007141") AnnotationAssertion(rdfs:label "visceral mesothelium") SubClassOf( ) # Class: (left internal carotid artery) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An internal carotid artery that branching_part_of a left common carotid artery plus branches.") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:16329") AnnotationAssertion( "FMA:4062") AnnotationAssertion(Annotation( "FMA:4062") "arteria caritis interna sinistra") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007142") AnnotationAssertion(rdfs:label "left internal carotid artery") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (right internal carotid artery) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An internal carotid artery that branching_part_of a right common carotid artery plus branches.") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:16330") AnnotationAssertion( "FMA:3949") AnnotationAssertion(Annotation( "FMA:3949") "arteria carotis interna dextra") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007143") AnnotationAssertion(rdfs:label "right internal carotid artery") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (dome of diaphragm) AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000933") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "DOI:10.1016/j.resp.2006.06.003 Brainerd EL, Owerkowicz T, Functional morphology and evolution of aspiration breathing in tetrapods. Respiratory physiology and neurobiology (2006)") "In mammals, the diaphragm muscle divides the thoracoabdominal cavity into thorax and abdomen. In most mammals, the diaphragm is a flat sheet with muscle fibers radiating outward from a central tendon, and the diaphragm's apposition to the cranial surface of the liver gives it a dome-shape. Muscle fiber contraction reduces the curvature of the dome, thereby expanding the thoracic cavity and aspirating air into the lungs.[well established][VHOG]") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:18046") AnnotationAssertion( "FMA:13332") AnnotationAssertion( "VHOG:0000933") AnnotationAssertion(Annotation( "FMA:13332") "diaphragm dome") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007145") AnnotationAssertion(rdfs:label "dome of diaphragm") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (posterior spinal artery) AnnotationAssertion(Annotation( ) "A spinal artery that arises from the vertebral artery, adjacent to the medulla oblongata[WP,modified].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:18243") AnnotationAssertion( "FMA:50522") AnnotationAssertion( "NCIT:C12876") AnnotationAssertion(Annotation( "ncithesaurus:Posterior_Spinal_Artery") "UMLS:C0226233") AnnotationAssertion(Annotation( "FMA:50522") "dorsal spinal artery") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007146") AnnotationAssertion(rdfs:label "posterior spinal artery") SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (lumen of midgut) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An anatomical cavity that surrounded_by a midgut.") AnnotationAssertion( "EMAPA:18377") AnnotationAssertion( "FMA:54366") AnnotationAssertion(Annotation( "FMA:54366") "midgut lumen") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007147") AnnotationAssertion(rdfs:label "lumen of midgut") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lumen of hindgut) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An anatomical cavity that surrounded_by a hindgut.") AnnotationAssertion( "EMAPA:18396") AnnotationAssertion( "FMA:54367") AnnotationAssertion(Annotation( "FMA:54367") "hindgut lumen") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007148") AnnotationAssertion(rdfs:label "lumen of hindgut") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (inferior thyroid artery) AnnotationAssertion(Annotation( "ncithesaurus:Inferior_Thyroid_Artery") "One of the three branches of the thyroid axis that supplies the thyroid gland and branches to form the ascending cervical, esophageal, inferior laryngeal, muscular and tracheal arteries.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:18623") AnnotationAssertion( "FMA:10662") AnnotationAssertion( "NCIT:C53022") AnnotationAssertion(Annotation( "ncithesaurus:Inferior_Thyroid_Artery") "UMLS:C0226264") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "arteria thyreoidea inferior") AnnotationAssertion( "UBERON:0007149") AnnotationAssertion(rdfs:label "inferior thyroid artery") AnnotationAssertion( "Thyrocervical:trunk.png"^^xsd:anyURI) SubClassOf( ) # Class: (superior thyroid artery) AnnotationAssertion(Annotation( ) "The superior thyroid artery arises from the external carotid artery just below the level of the greater cornu of the hyoid bone and ends in the thyroid gland.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:18624") AnnotationAssertion( "FMA:49472") AnnotationAssertion( "NCIT:C53021") AnnotationAssertion(Annotation( "ncithesaurus:Superior_Thyroid_Artery") "UMLS:C0226093") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "arteria thyreoidea superior") AnnotationAssertion( "UBERON:0007150") AnnotationAssertion(rdfs:label "superior thyroid artery") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/5/5a/Plate_16_Zuckerkandl.jpg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) # Class: (mitral valve leaflet) AnnotationAssertion(Annotation( ) "A valve leafleft that is part of a mitral valve.") AnnotationAssertion(Annotation( "FMA:7241") "Leaf of cardiac valve which has as its parts the anterior, and posterior leaflets that is attached to the chorda tendinea of left ventricle and to the frbrous ring of mitral valve.") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000822") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "DOI:10.1161/CIRCRESAHA.109.201566 Combs MD, Yutzey KE, Heart valve development. Circulatory Research (2009)") "The mature AV (atrioventricular) valve of the adult zebrafish 2-chambered heart is structurally similar to the mammalian AV valves with stratified ECM (extracellular matrix) and supporting chordae tendineae. Therefore, the major cellular and molecular events of valve development are largely conserved among animals with hearts composed of multiple chambers.[uncertain][VHOG]") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:18628") AnnotationAssertion( "FMA:7241") AnnotationAssertion( "VHOG:0000822") AnnotationAssertion(Annotation( "FMA:7241") "leaflet of mitral valve") AnnotationAssertion(Annotation( "FMA:7241") "mitral valve leaflet") AnnotationAssertion(Annotation( "FMA:7241") "mitral valvular leaflet") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "VHOG:0000822") Annotation( ) "mitral valve leaflets") AnnotationAssertion( "UBERON:0007151") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "mitral valve leaflet") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA-abduced") ObjectSomeValuesFrom( )) # Class: (inferior sagittal sinus) AnnotationAssertion(Annotation( "ncithesaurus:Inferior_Sagittal_Sinus") "An intracranial venous sinus that lies in a midline location along the lower free border of the falx cerebri of the brain. The sinus receives blood from the great cerebral vein and joins the superior sagittal sinus posteriorly.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:18635") AnnotationAssertion( "FMA:50768") AnnotationAssertion( "NCIT:C12514") AnnotationAssertion(Annotation( "ncithesaurus:Inferior_Sagittal_Sinus") "UMLS:C0226861") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007152") AnnotationAssertion(rdfs:label "inferior sagittal sinus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (superior epigastric artery) AnnotationAssertion(Annotation( ) Annotation( ) "An artery that arises from the internal thoracic arteryand anastomoses with the inferior epigastric artery at the umbilicus and supplies the anterior part of the abdominal wall and some of the diaphragm.") AnnotationAssertion(Annotation( ) "superior epigastric") AnnotationAssertion(Annotation( ) "superior epigastric branch") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:18752") AnnotationAssertion( "FMA:10646") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "a. epigastrica superior") AnnotationAssertion( "UBERON:0007153") AnnotationAssertion(rdfs:label "superior epigastric artery") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (inferior epigastric vein) AnnotationAssertion(Annotation( "ncithesaurus:Deep_Epigastric_Vein") "The blood vessel carrying deoxygenated blood that arises from the superior epigastric vein and empties into the external iliac vein.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:18760") AnnotationAssertion( "FMA:21162") AnnotationAssertion( "NCIT:C32434") AnnotationAssertion(Annotation( "ncithesaurus:Deep_Epigastric_Vein") "UMLS:C0226762") AnnotationAssertion( "uberon") AnnotationAssertion( "deep epigastric vein") AnnotationAssertion(Annotation( ) "venae epigastricae inferiores") AnnotationAssertion( "UBERON:0007154") AnnotationAssertion(rdfs:label "inferior epigastric vein") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (superior epigastric vein) AnnotationAssertion(Annotation( ) Annotation( "UBERON:cjm"^^xsd:string) "A vein that drains into the internal thoracic vein, anastomosing with the inferior epigastric vein at the level of the umbilicus and drains the anterior part of the abdominal wall and some of the diaphragm. Along its course, it is accompanied by a similarly named artery, the superior epigastric artery.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:18761") AnnotationAssertion( "FMA:4731") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "venae epigastricae superiores") AnnotationAssertion( "UBERON:0007155") AnnotationAssertion(rdfs:label "superior epigastric vein") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA/obol"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (inferior thyroid vein) AnnotationAssertion(Annotation( ) "The inferior thyroid veins two, frequently three or four, in number, arise in the venous plexus on the thyroid gland, communicating with the middle and superior thyroid veins. They form a plexus in front of the trachea, behind the Sternothyreoidei. From this plexus, a left vein descends and joins the left innominate trunk, and a right vein passes obliquely downward and to the right across the innominate artery to open into the right innominate vein, just at its junction with the superior vena cava; sometimes the right and left veins open by a common trunk in the latter situation. These veins receive esophageal tracheal, and inferior laryngeal veins, and are provided with valves at their terminations in the innominate veins.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:18763") AnnotationAssertion( "FMA:4728") AnnotationAssertion(Annotation( "FMA:4728") "inferior thyroid venous tree") AnnotationAssertion(Annotation( "FMA:4728") "vena thyroidea inferioris") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007156") AnnotationAssertion(rdfs:label "inferior thyroid vein") SubClassOf( ) # Class: (superior thyroid vein) AnnotationAssertion(Annotation( ) "The superior thyroid vein begins in the substance and on the surface of the thyroid gland, by tributaries corresponding with the branches of the superior thyroid artery, and ends in the upper part of the internal jugular vein. It receives the superior laryngeal and cricothyroid veins.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:18764") AnnotationAssertion( "FMA:14323") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007157") AnnotationAssertion(rdfs:label "superior thyroid vein") SubClassOf( ) # Class: (lumen of anal canal) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An anatomical cavity that surrounded_by a anal canal.") AnnotationAssertion( "EMAPA:18836") AnnotationAssertion( "FMA:17357") AnnotationAssertion(Annotation( "FMA:17357") "anal canal lumen") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007158") AnnotationAssertion(rdfs:label "lumen of anal canal") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lumen of colon) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An anatomical cavity that surrounded_by a colon.") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:18945") AnnotationAssertion( "FMA:18374") AnnotationAssertion(Annotation( "FMA:18374") "colon lumen") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:18374") "colonic lumen") AnnotationAssertion( "UBERON:0007159") AnnotationAssertion(rdfs:label "lumen of colon") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (inferior petrosal sinus) AnnotationAssertion(Annotation( ) "The inferior petrosal sinus, within the human head, is an area beneath the brain, which allows blood veins to span the area, from the center of the head downward. It drains from the cavernous sinus (beneath the brain) to the sigmoid sinuses above the internal jugular vein.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:19234") AnnotationAssertion( "FMA:50770") AnnotationAssertion(Annotation( "FMA:50770") "sinus petrosal inferior") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007160") AnnotationAssertion(rdfs:label "inferior petrosal sinus") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (medial arcuate ligament) AnnotationAssertion(Annotation( ) "The medial arcuate ligament (also medial lumbocostal arch) is tendinous fascia that arches over the psoas major muscle as it passes through the diaphragm.") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:19237") AnnotationAssertion( "FMA:58282") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "internal arcuate ligament") AnnotationAssertion(Annotation( ) "medial lumbocostal arch") AnnotationAssertion(Annotation( ) "medial lumbocostal arches") AnnotationAssertion( "UBERON:0007161") AnnotationAssertion(rdfs:label "medial arcuate ligament") SubClassOf( ) DisjointClasses(Annotation( "lexical"^^xsd:string) ) # Class: (lateral arcuate ligament) AnnotationAssertion(Annotation( ) "The lateral arcuate ligament (also lateral lumbocostal arch) is a ligament under the diaphragm that arches across the upper part of the quadratus lumborum. It is traversed by the subcostal nerve, artery and vein.") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:19238") AnnotationAssertion( "FMA:58283") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "external arcuate ligament") AnnotationAssertion(Annotation( ) "lateral lumbocostal arch") AnnotationAssertion( "UBERON:0007162") AnnotationAssertion(rdfs:label "lateral arcuate ligament") SubClassOf( ) # Class: (superior nasal meatus) AnnotationAssertion(Annotation( ) "The superior meatus, the smallest of the three meatuses of the nose, occupies the middle third of the lateral wall of the nasal cavity. It lies between the superior nasal conchC& and middle nasal conchC&; the sphenopalatine foramen opens into it behind, and the posterior ethmoidal cells in front. The sphenoidal sinus opens into a recess, the sphenoethmoidal recess, which is placed above and behind the superior concha.") AnnotationAssertion( "TODO - check FMA") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:19276") AnnotationAssertion( "FMA:53138") AnnotationAssertion( "FMA:57480") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "meatus nasi superior") AnnotationAssertion(Annotation( ) "superior meatus") AnnotationAssertion( "UBERON:0007163") AnnotationAssertion(rdfs:label "superior nasal meatus") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/d/d6/Gray196.png"^^xsd:anyURI) SubClassOf( ) # Class: (distal radio-ulnar joint) AnnotationAssertion(Annotation( ) "The Distal Radioulnar Articulation (inferior radioulnar joint) is a pivot-joint formed between the head of the ulna and the ulnar notch on the distal radius.") AnnotationAssertion(Annotation( "MA:0000462") "radio-ulnar joint") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:19316") AnnotationAssertion( "FMA:35290") AnnotationAssertion( "MA:0000462") AnnotationAssertion(Annotation( "FMA:35290") "articulation radioulnaris distalis") AnnotationAssertion(Annotation( "FMA:35290") "distal radioulnar joint") AnnotationAssertion(Annotation( "FMA:35290") "inferior radioulnar joint") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007164") AnnotationAssertion(rdfs:label "distal radio-ulnar joint") SubClassOf( ) # Class: (proximal radio-ulnar joint) AnnotationAssertion(Annotation( ) "The proximal radioulnar articulation (superior radioulnar joint) is a trochoid or pivot joint between the circumference of the head of the radius and the ring formed by the radial notch of the ulna and the annular ligament.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:19317") AnnotationAssertion( "FMA:38860") AnnotationAssertion( "MA:0003146") AnnotationAssertion(Annotation( "FMA:38860") "superior radioulnar joint") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007165") AnnotationAssertion(rdfs:label "proximal radio-ulnar joint") SubClassOf( ) # Class: (left dome of diaphragm) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:25047") AnnotationAssertion( "FMA:13334") AnnotationAssertion(Annotation( "FMA:13334") "left dome of diaphragm viewed radiologically") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007166") AnnotationAssertion(rdfs:label "left dome of diaphragm") SubClassOf( ) # Class: (right dome of diaphragm) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:25048") AnnotationAssertion( "FMA:13333") AnnotationAssertion(Annotation( "FMA:13333") "right dome of diaphragm viewed radiologically") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007167") AnnotationAssertion(rdfs:label "right dome of diaphragm") SubClassOf( ) # Class: (long head of biceps brachii) AnnotationAssertion(Annotation( ) "The long head originates on the supraglenoid tubercle just above the shoulder joint from where its tendon passes down along the intertubercular groove of the humerus into the joint capsule of the shoulder joint. [1] When the humerus is in motion, the tendon of the long head is held firmly in place in the intertubercular groove by the greater and lesser tubercles and the overlying transverse humeral ligament. During the motion from external to internal rotation, the tendon is forced medially against the lesser tubercle and superiorly against the transverse ligament.") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:25054") AnnotationAssertion( "FMA:37683") AnnotationAssertion(Annotation( "FMA:37683") "caput longum (musculus biceps brachii)") AnnotationAssertion(Annotation( "FMA:37683") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "caput longum musculus bicipitis brachii") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "EMAPA:25054") "capus longum of biceps brachii") AnnotationAssertion(Annotation( "FMA:37683") "long head of biceps brachii muscle") AnnotationAssertion( "UBERON:0007168") AnnotationAssertion(rdfs:label "long head of biceps brachii") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (short head of biceps brachii) AnnotationAssertion(Annotation( ) "Proximally (towards the body), the short head of the biceps attaches to (originates from) the coracoid process at the top of the scapula.") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:25055") AnnotationAssertion( "FMA:37682") AnnotationAssertion(Annotation( "FMA:37682") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "caput breve (musculus biceps brachii)") AnnotationAssertion(Annotation( "FMA:37682") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "caput breve musculus bicipitis brachii") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "EMAPA:25055") "caput breve of biceps bracii") AnnotationAssertion(Annotation( "FMA:37682") "short head of biceps brachii muscle") AnnotationAssertion( "UBERON:0007169") AnnotationAssertion(rdfs:label "short head of biceps brachii") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (squamous part of occipital bone) AnnotationAssertion(Annotation( ) "The squama of the occipital bone, situated above and behind the foramen magnum, is curved from above downward and from side to side.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:25113") AnnotationAssertion( "FMA:52860") AnnotationAssertion(Annotation( ) "occipital squama") AnnotationAssertion(Annotation( "FMA:52860") "occipital squama") AnnotationAssertion(Annotation( ) "squama occipitalis") AnnotationAssertion(Annotation( "FMA:52860") "squama of occipital bone") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "squama occipitalis") AnnotationAssertion( "UBERON:0007170") AnnotationAssertion(rdfs:label "squamous part of occipital bone") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/b/bf/Gray131.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (border of scapula) AnnotationAssertion( "EMAPA:25124") AnnotationAssertion( "FMA:23797") AnnotationAssertion(Annotation( "FMA:23797") "scapular border") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007171") AnnotationAssertion(rdfs:label "border of scapula") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (angle of scapula) AnnotationAssertion( "EMAPA:25125") AnnotationAssertion( "FMA:23800") AnnotationAssertion(Annotation( "FMA:23800") "scapular angle") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007172") AnnotationAssertion(rdfs:label "angle of scapula") AnnotationAssertion(rdfs:seeAlso "https://github.com/obophenotype/uberon/issues/58"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lateral border of scapula) AnnotationAssertion(Annotation( ) "The lateral border (or axillary border, or margin) is the thickest of the three borders of the scapula. It begins above at the lower margin of the glenoid cavity, and inclines obliquely downward and backward to the inferior angle. Immediately below the glenoid cavity is a rough impression, the infraglenoid tuberosity, about 2.5 cm. in length, which gives origin to the long head of the Triceps brachii; in front of this is a longitudinal groove, which extends as far as the lower third of this border, and affords origin to part of the Subscapularis. The inferior third is thin and sharp, and serves for the attachment of a few fibers of the Teres major behind, and of the Subscapularis in front.") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:25126") AnnotationAssertion( "FMA:23239") AnnotationAssertion(Annotation( "FMA:23239") "axillary border of scapula") AnnotationAssertion(Annotation( "FMA:23239") "lateral border of scapula") AnnotationAssertion(Annotation( "FMA:23239") "margo lateralis (scapula)") AnnotationAssertion(Annotation( "FMA:23239") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "margo lateralis scapulae") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:23239") "lateral part of scapula") AnnotationAssertion( "UBERON:0007173") AnnotationAssertion(rdfs:label "lateral border of scapula") SubClassOf(Annotation( "EMAPA-modified") ) DisjointClasses(Annotation( "lexical"^^xsd:string) ) # Class: (medial border of scapula) AnnotationAssertion(Annotation( ) "The medial border of the scapula (vertebral border, medial margin) is the longest of the three borders, and extends from the medial to the inferior angle. It is arched, intermediate in thickness between the superior and the axillary borders, and the portion of it above the spine forms an obtuse angle with the part below. This border presents an anterior and a posterior lip, and an intermediate narrow area. The anterior lip affords attachment to the Serratus anterior; the posterior lip, to the Supraspinatus above the spine, the Infraspinatus below; the area between the two lips, to the Levator scapulC& above the triangular surface at the commencement of the spine, to the Rhomboideus minor on the edge of that surface, and to the Rhomboideus major below it; this last is attached by means of a fibrous arch, connected above to the lower part of the triangular surface at the base of the spine, and below to the lower part of the border.") AnnotationAssertion( "consider merging with UBERON:1500000 scapular blade, depending on https://github.com/obophenotype/uberon/issues/339. See also http://www.ncbi.nlm.nih.gov/pubmed/20136669") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:25127") AnnotationAssertion( "FMA:23242") AnnotationAssertion(Annotation( "FMA:23242") "margo medialis (scapula)") AnnotationAssertion(Annotation( "FMA:23242") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "margo medialis scapulae") AnnotationAssertion(Annotation( "FMA:23242") "medial part of scapula") AnnotationAssertion(Annotation( "FMA:23242") "vertebral border of scapula") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "medial border of the scapula") AnnotationAssertion(Annotation( ) "medial margin of the scapula") AnnotationAssertion(Annotation( ) "vertebral border") AnnotationAssertion(Annotation( ) "vertebral border of the scapula") AnnotationAssertion( "UBERON:0007174") AnnotationAssertion(rdfs:label "medial border of scapula") SubClassOf(Annotation( "EMAPA-modified") ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (inferior angle of scapula) AnnotationAssertion(Annotation( ) "An angle of the scapula formed by the union of the vertebral and axillary borders; its dorsal surface affords attachment to the Teres major and frequently to a few fibers of the Latissimus dorsi.[WP,unvetted].") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:25128") AnnotationAssertion( "FMA:13315") AnnotationAssertion(Annotation( "FMA:13315") "angulus inferior (scapula)") AnnotationAssertion(Annotation( ) Annotation( ) "angulus inferior scapulae") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007175") AnnotationAssertion(rdfs:label "inferior angle of scapula") SubClassOf(Annotation( "EMAPA-modified") ) # Class: (superior angle of scapula) AnnotationAssertion(Annotation( ) "An angle of the scapula formed by the junction of the superior and vertebral borders. It is thin, smooth, rounded, inclined somewhat lateralward, and gives attachment to a few fibers of the Levator scapulae[WP,unvetted].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:25129") AnnotationAssertion( "FMA:23248") AnnotationAssertion(Annotation( "FMA:23248") "angulus superior (scapula)") AnnotationAssertion(Annotation( ) Annotation( ) "angulus superior scapulae") AnnotationAssertion(Annotation( ) "medial angle of scapula") AnnotationAssertion(Annotation( ) "superior medial angle of scapula") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:23248") "superior angle zone of scapula") AnnotationAssertion( "UBERON:0007176") AnnotationAssertion(rdfs:label "superior angle of scapula") SubClassOf(Annotation( "EMAPA-modified") ) DisjointClasses(Annotation( "lexical"^^xsd:string) ) # Class: (lamina propria of mucosa of colon) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A lamina propria that is part of a colonic mucosa.") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:27395") AnnotationAssertion( "FMA:15657") AnnotationAssertion( "MA:0003196") AnnotationAssertion(Annotation( "FMA:15657") "colonic lamina propria") AnnotationAssertion(Annotation( "FMA:15657") "lamina propria mucosae of colon") AnnotationAssertion(Annotation( "FMA:15657") "lamina propria of colonic mucosa") AnnotationAssertion(Annotation( "FMA:15657") "lamina propria of colonic mucous membrane") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007177") AnnotationAssertion(rdfs:label "lamina propria of mucosa of colon") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (muscularis mucosae of colon) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A muscularis mucosa that is part of a colonic mucosa.") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:27399") AnnotationAssertion( "FMA:15656") AnnotationAssertion( "MA:0003197") AnnotationAssertion(Annotation( "FMA:15656") "lamina muscularis of colonic mucosa") AnnotationAssertion(Annotation( "FMA:15656") "lamina muscularis of colonic mucous membrane") AnnotationAssertion( "muscularis mucosa of colon") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007178") AnnotationAssertion(rdfs:label "muscularis mucosae of colon") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (basal cell layer of urothelium) AnnotationAssertion( "EMAPA:28806") AnnotationAssertion( "FMA:84154") AnnotationAssertion(Annotation( "FMA:84154") "basal cell layer of uroepithelium") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007179") AnnotationAssertion(rdfs:label "basal cell layer of urothelium") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (atretic follicle of ovary) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:29874") AnnotationAssertion( "FMA:18697") AnnotationAssertion(Annotation( "FMA:18697") "atretic follicle") AnnotationAssertion(Annotation( "FMA:18697") "folliculus atreticus (ovarium)") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007180") AnnotationAssertion(rdfs:label "atretic follicle of ovary") SubClassOf( ) # Class: (pericardio-peritoneal canal mesothelium) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A mesothelium that is part of a pericardio-peritoneal canal.") AnnotationAssertion( "EHDAA2:0001442") AnnotationAssertion( "EMAPA:16284") AnnotationAssertion( "VHOG:0000447") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "VHOG:0000447") "pericardio-peritoneal canal mehomhelium") AnnotationAssertion( "UBERON:0007185") AnnotationAssertion(rdfs:label "pericardio-peritoneal canal mesothelium") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pericardial visceral mesothelium) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A visceral mesothelium that is part of a pericardium.") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000778") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "DOI:10.1152/ajpheart.00967.2007 Jöbsis PD, Ashikaga H, Wen H, Rothstein EC, Horvath KA, McVeigh ER, Balaban RS, The visceral pericardium: macromolecular structure and contribution to passive mechanical properties of the left ventricle. American journal of physiology, Heart and circulatory physiology (2007)") "Found in all vertebrates, the VP (visceral pericardium) is also known as the cardiac epimysium. This outermost layer of the epicardium consists of a thin layer of mesothelial cells over a dense network of collagen and elastin fibers.[well established][VHOG]") AnnotationAssertion( "EMAPA:16589") AnnotationAssertion( "FMA:19741") AnnotationAssertion( "VHOG:0000778") AnnotationAssertion(Annotation( "FMA:19741") "mesothelium of visceral pericardium") AnnotationAssertion(Annotation( "FMA:19741") "mesothelium of visceral serous pericardium") AnnotationAssertion(Annotation( "FMA:19741") "visceral serous pericardium mesothelium") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "VHOG:0000778") "pericardial visceral mehomhelium") AnnotationAssertion(Annotation( "EMAPA:16589") "pericardium visceral mesothelium") AnnotationAssertion( "UBERON:0007186") AnnotationAssertion(rdfs:label "pericardial visceral mesothelium") SubClassOf( ) SubClassOf( ) # Class: (pericardial parietal mesothelium) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A parietal mesothelium that is part of a pericardium.") AnnotationAssertion(Annotation( "EMAPA"^^xsd:string) "EMAPA:16588 belongs here on the basis of exact synonym") AnnotationAssertion( "EMAPA:16588") AnnotationAssertion( "FMA:19742") AnnotationAssertion(Annotation( "FMA:19742") "mesothelium of parietal pericardium") AnnotationAssertion(Annotation( "FMA:19742") "mesothelium of parietal serous pericardium") AnnotationAssertion(Annotation( "FMA:19742") "parietal serous pericardium mesothelium") AnnotationAssertion(Annotation( "EMAPA:16588") "pericardium parietal mesothelium") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007187") AnnotationAssertion(rdfs:label "pericardial parietal mesothelium") SubClassOf( ) SubClassOf( ) # Class: (mesothelium of serous pericardium) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A mesothelium that is part of a serous pericardium.") AnnotationAssertion( ) AnnotationAssertion( "BTO:0003157") AnnotationAssertion( "EMAPA:16133") AnnotationAssertion( "FMA:18149") AnnotationAssertion(Annotation( "FMA:18149") "mesothelium of pericardium") AnnotationAssertion(Annotation( "FMA:18149") "pericardial mesothelium") AnnotationAssertion(Annotation( "FMA:18149") "serous pericardium mesothelium") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007188") AnnotationAssertion(rdfs:label "mesothelium of serous pericardium") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (paracentral gyrus) AnnotationAssertion( ) AnnotationAssertion( "FMA:77537") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007190") AnnotationAssertion(rdfs:label "paracentral gyrus") SubClassOf( ) # Class: (anterior paracentral gyrus) AnnotationAssertion( ) AnnotationAssertion( "BTO:0005602") AnnotationAssertion( "FMA:77537") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007191") AnnotationAssertion(rdfs:label "anterior paracentral gyrus") SubClassOf( ) DisjointClasses(Annotation( "lexical"^^xsd:string) ) # Class: (posterior paracentral gyrus) AnnotationAssertion( ) AnnotationAssertion( "BTO:0005603") AnnotationAssertion( "FMA:77538") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007192") AnnotationAssertion(rdfs:label "posterior paracentral gyrus") SubClassOf( ) # Class: (orbital gyrus) AnnotationAssertion(Annotation( ) "The inferior or orbital surface of the frontal lobe is concave, and rests on the orbital plate of the frontal bone. It is divided into four orbital gyri by a well-marked H-shaped orbital sulcus. These are named, from their position, the medial, anterior, lateral, and posterior orbital gyri. The medial orbital gyrus presents a well-marked antero-posterior sulcus, the olfactory sulcus, for the olfactory tract; the portion medial to this is named the straight gyrus, and is continuous with the superior frontal gyrus on the medial surface.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:OrG") AnnotationAssertion( "FMA:256194") AnnotationAssertion(Annotation( ) Annotation( ) "orbital gyri") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "gyrus orbitales") AnnotationAssertion( "UBERON:0007193") AnnotationAssertion(rdfs:label "orbital gyrus") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/b/b1/Human_brainstem_anterior_view_2_description.JPG"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (vesicular gland) AnnotationAssertion(Annotation( "BTO:0003717") "The vesicular gland is part of the male reproductive system. The vesicular gland contributes fluids, energy substrates, and buffers to semen. It can be found near the Coagulating gland, which also belongs to the reproductive system.") AnnotationAssertion( "TODO - check this against seminal vesicle") AnnotationAssertion(Annotation( "Lombardi") "bipartite seminal vesicles, with a seminal gland and vesicular gland sharing a common duct are found in lagomorphs") AnnotationAssertion( "BTO:0003717") AnnotationAssertion( "EMAPA:19180") AnnotationAssertion( "MA:0000405") AnnotationAssertion( "ncithesaurus:Vesicular_Gland") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007194") AnnotationAssertion(rdfs:label "vesicular gland") SubClassOf( ) # Class: (stroma of bone marrow) AnnotationAssertion(Annotation( ) "The stroma of the bone marrow is all tissue not directly involved in the primary function of hematopoiesis. The yellow bone marrow belongs here, and makes the majority of the bone marrow stroma, in addition to stromal cells located in the red bone marrow. Yellow bone marrow is found in the Medullary cavity. Still, the stroma is indirectly involved in hematopoiesis, since it provides the hematopoietic microenvironment that facilitates hematopoiesis by the parenchymal cells. For instance, they generate colony stimulating factors, affecting hematopoiesis.") AnnotationAssertion( ) AnnotationAssertion( "CALOHA:TS-0085") AnnotationAssertion( "FMA:21426") AnnotationAssertion(Annotation( "FMA:21426") "bone marrow stroma") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007195") AnnotationAssertion(rdfs:label "stroma of bone marrow") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (tracheobronchial tree) AnnotationAssertion(Annotation( ) "The structure from the trachea, bronchi, and bronchioles that forms the airways that supply air to the lungs. The lining of the tracheobronchial tree consists of ciliated columnar epithelial cells.") AnnotationAssertion( "UBERON:0004102") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:7393") AnnotationAssertion( "NCIT:C117875") AnnotationAssertion(Annotation( "FMA:7393") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "arbor tracheobronchialis") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "HP:0005607") "tracheobronchial system") AnnotationAssertion( "UBERON:0007196") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "tracheobronchial tree") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "Wikipedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (hermaphroditic organism) AnnotationAssertion(Annotation( ) "Multicellular organism that can produce both male and female gametes.") AnnotationAssertion( "AAO:0010035") AnnotationAssertion( "BILA:0000029") AnnotationAssertion( "CARO:0000029") AnnotationAssertion( "HAO:0000029") AnnotationAssertion( "TADS:0000601") AnnotationAssertion( "WBbt:0007849") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BILA:0000029") "dioecious organism") AnnotationAssertion(Annotation( "WBbt:0007849") "hermaphrodite") AnnotationAssertion( "UBERON:0007197") AnnotationAssertion(rdfs:label "hermaphroditic organism") SubClassOf( ) # Class: (hermaphrodite anatomical structure) AnnotationAssertion(Annotation( "JB:DEF") "An anatomical structure present only in hermaphrodites.") AnnotationAssertion( "AEO:0000177") AnnotationAssertion( "EHDAA2:0003177") AnnotationAssertion( "WBbt:0005758") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "WBbt:0005758") "hermaphrodite-specific") AnnotationAssertion( "UBERON:0007198") AnnotationAssertion(rdfs:label "hermaphrodite anatomical structure") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (brachiocephalic vasculature) AnnotationAssertion(Annotation( ) "The vasculature consisting of brachiocephalic arteries and veins.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007204") AnnotationAssertion(rdfs:label "brachiocephalic vasculature") SubClassOf( ) # Class: (mesenchyme derived from head neural crest) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "Mesenchyme that develops_from a cranial neural crest.") AnnotationAssertion( "EFO:0003572") AnnotationAssertion( "EHDAA2:0000735") AnnotationAssertion( "EMAPA:16169") AnnotationAssertion( "EMAPA:16271") AnnotationAssertion( "EMAPA_RETIRED:16271") AnnotationAssertion( "TAO:0000787") AnnotationAssertion( "ZFA:0000787") AnnotationAssertion( "head mesenchyme from cranial neural crest") AnnotationAssertion(Annotation( "EHDAA2:0000735") "head mesenchyme from neural crest") AnnotationAssertion( "head neural crest derived mesenchyme") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007213") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "mesenchyme derived from head neural crest") SubClassOf(Annotation( "ZFA"^^xsd:string) ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (mesenchyme derived from trunk neural crest) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "Mesenchyme that develops_from a trunk neural crest.") AnnotationAssertion( "EHDAA2:0002093") AnnotationAssertion( "EMAPA:16182") AnnotationAssertion( "TAO:0000999") AnnotationAssertion( "ZFA:0000999") AnnotationAssertion(Annotation( "EHDAA2:0002093") "trunk mesenchyme from neural crest") AnnotationAssertion( "trunk neural crest derived mesenchyme") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007214") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "mesenchyme derived from trunk neural crest") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (trabecula cranii) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Paired thin medially aligned bar of cartilage that extends from the anterior end of the chondrocranium to just anterior to the anterior end of the notochord. The posterior ends of the trabeculae cranii are continuous with the parachordal cartilages, and they enclose the hypophyseal fenestra.") AnnotationAssertion( "TAO:0001507") AnnotationAssertion( "ZFA:0001507") AnnotationAssertion(Annotation( "ZFA:0001507") Annotation( ) "trabeculae cranii") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007215") AnnotationAssertion(rdfs:comment "A paired cartilage element appearing in the preotic section of the head at the border between the brain and visceral structures (The Trabecula cranii: development and homology of an enigmatic vertebrate head structure - Cerny et al 2006)") AnnotationAssertion(rdfs:label "trabecula cranii") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (late embryonic stage) AnnotationAssertion(Annotation( "BGEE:ANiknejad") "An embryo stage that covers late steps of the embryogenesis with a fully formed embryo still developing before birth or egg hatching.") AnnotationAssertion( ) AnnotationAssertion( "EV:0300011") AnnotationAssertion( "EVM:2990031") AnnotationAssertion( "FBdv:00005333") AnnotationAssertion( "FMA:63631") AnnotationAssertion( "MIAA:0000399") AnnotationAssertion( "MmusDv:0000031") AnnotationAssertion( "OGES:000023") AnnotationAssertion(Annotation( "MIAA:0000399") "embryo late (growth) stage") AnnotationAssertion(Annotation( ) Annotation( ) "fetal stage") AnnotationAssertion(Annotation( "MIAA:0000399") "fetus") AnnotationAssertion(Annotation( ) Annotation( ) "fetus stage") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0000449") "embryo late growth stage") AnnotationAssertion(Annotation( "BTO:0000449") "embryo late stage") AnnotationAssertion( "UBERON:0007220") AnnotationAssertion(rdfs:label "late embryonic stage") AnnotationAssertion(rdfs:seeAlso "https://github.com/obophenotype/uberon/issues/355"^^xsd:anyURI) AnnotationAssertion(rdfs:seeAlso "https://github.com/obophenotype/uberon/issues/565"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (neonate stage) AnnotationAssertion(Annotation( ) Annotation( ) "Of or pertaining to the period of time immediately following birth, or to the newborn.") AnnotationAssertion( "consider splitting infant/newborn") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0001762") AnnotationAssertion( "EV:0300037") AnnotationAssertion( "HsapDv:0000082") AnnotationAssertion( "MmusDv:0000096") AnnotationAssertion( "NIF_Organism:birnlex_695") AnnotationAssertion( "OGES:000025") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "neonatal stage") AnnotationAssertion(Annotation( ) Annotation( ) "fledgling stage") AnnotationAssertion(Annotation( ) Annotation( ) "hatchling") AnnotationAssertion(Annotation( ) Annotation( ) "hatchling stage") AnnotationAssertion(Annotation( ) Annotation( ) "infant stage") AnnotationAssertion(Annotation( ) Annotation( ) "nestling stage") AnnotationAssertion(Annotation( "NCBITaxon:9263") Annotation( ) "pouch stage") AnnotationAssertion(Annotation( "NCBITaxon:189497") Annotation( ) "puggle") AnnotationAssertion(Annotation( "NCBITaxon:189497") Annotation( ) "puggle stage") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "newborn stage") AnnotationAssertion( "UBERON:0007221") AnnotationAssertion(rdfs:label "neonate stage") AnnotationAssertion(rdfs:seeAlso "https://github.com/obophenotype/uberon/issues/350"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (late adult stage) AnnotationAssertion( ) AnnotationAssertion( "EV:0300123") AnnotationAssertion( "HsapDv:0000093") AnnotationAssertion( "NCIT:C16268") AnnotationAssertion( "NIF_Organism:birnlex_691") AnnotationAssertion(Annotation( "ncithesaurus:Elderly") "UMLS:C0001792") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "EV:0300123") "elderly") AnnotationAssertion(Annotation( "EV:0300123") "elderly stage") AnnotationAssertion(Annotation( "EV:0300123") "geriatric") AnnotationAssertion(Annotation( "EV:0300123") "geriatric stage") AnnotationAssertion( "UBERON:0007222") AnnotationAssertion(rdfs:label "late adult stage") AnnotationAssertion(rdfs:seeAlso "https://github.com/obophenotype/uberon/issues/495"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (osseus cochlea) AnnotationAssertion(Annotation( ) "The osseous cochlea is the bony foundation that forms the small shell arrangement for the cochlear nerve.") AnnotationAssertion( "TODO - check this. in MA, cochlea is not part of the bony labyrinth") AnnotationAssertion( "EMAPA:35620") AnnotationAssertion( "MA:0000239") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007223") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "osseus cochlea") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (medial entorhinal cortex) AnnotationAssertion(Annotation( "NeuroNames:1113") Annotation( "UBERON:cjm"^^xsd:string) "One of two subdivisions of the entorhinal cortex, located medially.") AnnotationAssertion(Annotation( ) Annotation( ) "MEC") AnnotationAssertion( ) AnnotationAssertion( "BAMS:MEnt") AnnotationAssertion( "BTO:0004346") AnnotationAssertion( "DHBA:10319") AnnotationAssertion( "EMAPA:35545") AnnotationAssertion( "MA:0000922") AnnotationAssertion( "PBA:128011936") AnnotationAssertion( "entorhinal area, medial part") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007224") AnnotationAssertion(rdfs:comment "Connectivity notes: The medial entorhinal cortex preferentially connects with the postrhinal cortex, the presubiculum, visual association (occipital) and retrosplenial cortices[http://www.scholarpedia.org/article/Entorhinal_cortex]") AnnotationAssertion(rdfs:label "medial entorhinal cortex") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses(Annotation( "lexical"^^xsd:string) ) # Class: (lateral entorhinal cortex) AnnotationAssertion(Annotation( "NeuroNames:1113") Annotation( "UBERON:cjm"^^xsd:string) "One of two subdivisions of the entorhinal cortex, located laterally.") AnnotationAssertion(Annotation( ) Annotation( ) "LEC") AnnotationAssertion( ) AnnotationAssertion( "BAMS:ENTl") AnnotationAssertion( "BAMS:LEnt") AnnotationAssertion( "BTO:0004347") AnnotationAssertion( "DHBA:10318") AnnotationAssertion( "EMAPA:35477") AnnotationAssertion( "MA:0000911") AnnotationAssertion( "MBA:918") AnnotationAssertion( "PBA:128011876") AnnotationAssertion(Annotation( "ABA:ENTl") "entorhinal area, lateral part") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BAMS:ENTl") "entorhinal cortex lateral part") AnnotationAssertion( "UBERON:0007225") AnnotationAssertion(rdfs:comment "Connectivity notes: The lateral entorhinal cortex, for example, is strongly connected to the perirhinal cortex, olfactory and insular cortex and the amygdala.[http://www.scholarpedia.org/article/Entorhinal_cortex]") AnnotationAssertion(rdfs:label "lateral entorhinal cortex") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "MA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "MA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (superior vestibular nucleus) AnnotationAssertion(Annotation( ) "The superior vestibular nucleus is the dorso-lateral part of the vestibular nucleus and receives collaterals and terminals from the ascending branches of the vestibular nerve. Its axons terminate in much the same manner as do those from the lateral nucleus.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:SUV") AnnotationAssertion( "BAMS:SVN") AnnotationAssertion( "BAMS:SuVe") AnnotationAssertion( "BM:Me-VS-VSS") AnnotationAssertion( "BTO:0004372") AnnotationAssertion( "CALOHA:TS-2079") AnnotationAssertion( "DHBA:12452") AnnotationAssertion( "EV:0100257") AnnotationAssertion( "FMA:54617") AnnotationAssertion( "HBA:9701") AnnotationAssertion( "MBA:217") AnnotationAssertion( "NCIT:C33703") AnnotationAssertion(Annotation( "ncithesaurus:Superior_Vestibular_Nucleus") "UMLS:C0228757") AnnotationAssertion(Annotation( "FMA:54617") "nucleus of Bechterew") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "Bechterew's nucleus") AnnotationAssertion(Annotation( "BTO:0004372") "Bekhterevs nucleus") AnnotationAssertion(Annotation( ) Annotation( ) "nucleus vestibularis superior") AnnotationAssertion( "UBERON:0007227") AnnotationAssertion(rdfs:label "superior vestibular nucleus") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/f/f8/Gray761.png"^^xsd:anyURI) SubClassOf( ) # Class: (vestibular nucleus) AnnotationAssertion(Annotation( ) Annotation( ) Annotation( ) "A cranial nucleus for the vestibular nerve. [WP,unvetted].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "CALOHA:TS-2078") AnnotationAssertion( "EMAPA:35923") AnnotationAssertion( "EV:0100254") AnnotationAssertion( "FMA:54602") AnnotationAssertion( "MA:0001032") AnnotationAssertion( "NCIT:C12821") AnnotationAssertion(Annotation( "ncithesaurus:Vestibular_Nucleus") "UMLS:C0042600") AnnotationAssertion(Annotation( "MA:0001032") "vestibular VIII nucleus") AnnotationAssertion(Annotation( "FMA:54602") "vestibular nucleus of acoustic nerve") AnnotationAssertion(Annotation( "FMA:54602") "vestibular nucleus of eighth cranial nerve") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007228") AnnotationAssertion(rdfs:comment "See comments for 'vestibular nuclear complex.") AnnotationAssertion(rdfs:label "vestibular nucleus") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/5/52/Gray691.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lateral vestibular nucleus) AnnotationAssertion(Annotation( "NLX:144002") "One of the nuclei comprising the vestibular nuclear complex. In some mammals, e.g., primates, it is further subdivided into subnuclei. It therefore differs in appearance and topology in different mammals.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:LAV") AnnotationAssertion( "BAMS:LVN") AnnotationAssertion( "BAMS:LVe") AnnotationAssertion( "BM:Me-VS-VSL") AnnotationAssertion( "BTO:0004370") AnnotationAssertion( "DHBA:12449") AnnotationAssertion( "EMAPA:36643") AnnotationAssertion( "FMA:54614") AnnotationAssertion( "GAID:603") AnnotationAssertion( "HBA:9699") AnnotationAssertion( "MBA:209") AnnotationAssertion( "MESH:D003689") AnnotationAssertion( "NCIT:C32951") AnnotationAssertion( "NLX:144002") AnnotationAssertion(Annotation( "ncithesaurus:Lateral_Vestibular_Nucleus") "UMLS:C0011193") AnnotationAssertion(Annotation( "FMA:54614") "Deiter's nucleus") AnnotationAssertion(Annotation( "FMA:54614") "Deiters' nucleus") AnnotationAssertion(Annotation( "FMA:54614") "lateral nucleus of Deiters") AnnotationAssertion(Annotation( "FMA:54614") "nucleus of Deiters") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0004370") "Deiters nucleus") AnnotationAssertion(Annotation( ) Annotation( ) "nucleus vestibularis lateralis") AnnotationAssertion( "UBERON:0007230") AnnotationAssertion(rdfs:label "lateral vestibular nucleus") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/f/f8/Gray761.png"^^xsd:anyURI) SubClassOf( ) # Class: (2 cell stage) AnnotationAssertion( "XAO:1000011") AnnotationAssertion( "XtroDO:0000006") AnnotationAssertion( "ZFS:0000002") AnnotationAssertion(Annotation( "XAO:1000011") "2-cell stage") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "two-cell stage") AnnotationAssertion(Annotation( "ZFS:0000002") "Cleavage:2-cell") AnnotationAssertion(Annotation( "XAO:1000011") Annotation( ) "NF stage 2 (2-cell)") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007232") AnnotationAssertion(rdfs:label "2 cell stage") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (4 cell stage) AnnotationAssertion( "XAO:1000013") AnnotationAssertion( "XtroDO:0000007") AnnotationAssertion( "ZFS:0000003") AnnotationAssertion(Annotation( "XAO:1000013") "4-cell stage") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "four-cell stage") AnnotationAssertion(Annotation( "ZFS:0000003") "Cleavage:4-cell") AnnotationAssertion(Annotation( "XAO:1000013") Annotation( ) "NF stage 3 (4-cell)") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007233") AnnotationAssertion(rdfs:label "4 cell stage") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete 4-8 cell stage) AnnotationAssertion( "UBERON:0019250") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007234") AnnotationAssertion(rdfs:label "obsolete 4-8 cell stage") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (8 cell stage) AnnotationAssertion( "XAO:1000014") AnnotationAssertion( "XtroDO:0000008") AnnotationAssertion( "ZFS:0000004") AnnotationAssertion(Annotation( "XAO:1000014") "8-cell stage") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "eight-cell stage") AnnotationAssertion(Annotation( "ZFS:0000004") "Cleavage:8-cell") AnnotationAssertion(Annotation( "XAO:1000014") Annotation( ) "NF stage 4 (8-cell)") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007236") AnnotationAssertion(rdfs:label "8 cell stage") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (1st arch mandibular component) AnnotationAssertion( "relationship to Meckel's cartilage to be added") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000510") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "DOI:10.1046/j.1469-7580.2001.19910133.x Graham A. The development and evolution of the pharyngeal arches. J Anat (2001)"^^xsd:string) "Subsequent vertebrate evolution has also involved major alterations to the pharynx; perhaps the most notable occurred with the evolution of the gnathostomes. This involved substantial modifications to the most anterior pharyngeal segments, with the jaw forming from the first, anterior, pharyngeal segment, while the second formed its supporting apparatus, the hyoid.[well established][VHOG]") AnnotationAssertion( "EHDAA2:0000031") AnnotationAssertion( "EHDAA:583") AnnotationAssertion( "EMAPA:16382") AnnotationAssertion( "VHOG:0000510") AnnotationAssertion(Annotation( "VHOG:0000510") "ventral pharyngeal arch 1") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "VHOG:0000510") "ventral mandibular arch") AnnotationAssertion(Annotation( "VHOG:0000510") "ventral visceral arch 1") AnnotationAssertion( "UBERON:0007237") AnnotationAssertion(rdfs:label "1st arch mandibular component") SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (1st arch maxillary component) AnnotationAssertion( "relationship to palatoquadrate to be added") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000511") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "DOI:10.1046/j.1469-7580.2001.19910133.x Graham A. The development and evolution of the pharyngeal arches. J Anat (2001)"^^xsd:string) "Subsequent vertebrate evolution has also involved major alterations to the pharynx; perhaps the most notable occurred with the evolution of the gnathostomes. This involved substantial modifications to the most anterior pharyngeal segments, with the jaw forming from the first, anterior, pharyngeal segment, while the second formed its supporting apparatus, the hyoid.[well established][VHOG]") AnnotationAssertion( "EHDAA2:0000038") AnnotationAssertion( "EHDAA:595") AnnotationAssertion( "EMAPA:16388") AnnotationAssertion( "VHOG:0000511") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007238") AnnotationAssertion(rdfs:label "1st arch maxillary component") SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (tunica media of artery) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A tunica media that is part of a artery.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:36294") AnnotationAssertion( "EV:0100029") AnnotationAssertion( "FMA:14273") AnnotationAssertion( "NCIT:C49321") AnnotationAssertion(Annotation( "ncithesaurus:Venous_System_Smooth_Muscle_Tissue") "UMLS:C1710627") AnnotationAssertion(Annotation( "EV:0100029") "arterial media") AnnotationAssertion(Annotation( "FMA:14273") "tunica media (arteriae)") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007239") AnnotationAssertion(rdfs:label "tunica media of artery") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (tunica adventitia of artery) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A tunica adventitia that is part of a artery.") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:36295") AnnotationAssertion( "EV:0100030") AnnotationAssertion( "FMA:14274") AnnotationAssertion(Annotation( "EV:0100030") "arterial adventitia") AnnotationAssertion(Annotation( "FMA:14274") "tunica externa (adventitia)(arteriae)") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007240") AnnotationAssertion(rdfs:label "tunica adventitia of artery") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (tunica adventitia of vein) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A tunica adventitia that is part of a vein.") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:36310") AnnotationAssertion( "EV:0100034") AnnotationAssertion( "FMA:14355") AnnotationAssertion(Annotation( "FMA:14355") "tunica externa (adventitia)(venae)") AnnotationAssertion(Annotation( "EV:0100034") "venous adventitia") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007241") AnnotationAssertion(rdfs:label "tunica adventitia of vein") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (tunica intima of vein) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A tunica intima that is part of a vein.") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:36308") AnnotationAssertion( "EV:0100032") AnnotationAssertion( "FMA:14353") AnnotationAssertion(Annotation( "FMA:14353") "tunica interna (intima)(venae)") AnnotationAssertion(Annotation( "EV:0100032") "venous intima") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007242") AnnotationAssertion(rdfs:label "tunica intima of vein") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (tunica media of vein) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A tunica media that is part of a vein.") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:36309") AnnotationAssertion( "EV:0100033") AnnotationAssertion( "FMA:14354") AnnotationAssertion(Annotation( "FMA:14354") "tunica media (venae)") AnnotationAssertion(Annotation( "EV:0100033") "venous media") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007243") AnnotationAssertion(rdfs:label "tunica media of vein") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (inferior olivary nucleus) AnnotationAssertion(Annotation( ) "The inferior olivary nucleus is the largest nucleus situated in the olivary body, part of the medulla oblongata.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0003844") AnnotationAssertion( "CALOHA:TS-2383") AnnotationAssertion( "EMAPA:19241") AnnotationAssertion( "VHOG:0001380") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "inferior olive") AnnotationAssertion( "UBERON:0007244") AnnotationAssertion(rdfs:label "inferior olivary nucleus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (nuclear complex of neuraxis) AnnotationAssertion(Annotation( ) "Gray matter of the central nervous system which is a collection of clustered nuclei.") AnnotationAssertion( "FMA:256381") AnnotationAssertion( "FMA:84059") AnnotationAssertion( "uberon") AnnotationAssertion( "cluster of neural nuclei") AnnotationAssertion( "neural nuclei") AnnotationAssertion( "nuclear complex") AnnotationAssertion( "UBERON:0007245") AnnotationAssertion(rdfs:label "nuclear complex of neuraxis") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (nucleus of superior olivary complex) AnnotationAssertion(Annotation( ) "Any of the nuclei that comprise the superior olivary complex (superior olive). This includes both the primary nuclei such as the lateral and medial nuclei, as well as periolivary nuclei.") AnnotationAssertion( "this class exists largely for consistency with the FMA. It is defined trivially with respect to the SOC. The class may be removed in future.") AnnotationAssertion( ) AnnotationAssertion( "FMA:72246") AnnotationAssertion(Annotation( "FMA:72246") "superior olivary complex nucleus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007247") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "nucleus of superior olivary complex") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (dorsal accessory inferior olivary nucleus) AnnotationAssertion(Annotation( ) Annotation( ) "The inferior olivary nucleus that is the smallest, and appears on transverse section as a curved lamina behind the primary olivary nucleus.") AnnotationAssertion( "UBERON:0014288") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:DIO") AnnotationAssertion( "BAMS:IOD") AnnotationAssertion( "BAMS:IOda") AnnotationAssertion( "DHBA:12603") AnnotationAssertion( "FMA:72593") AnnotationAssertion( "HBA:9562") AnnotationAssertion( "NLXANAT:100310") AnnotationAssertion(Annotation( "NLXANAT:100310") Annotation( ) "DAO") AnnotationAssertion(Annotation( "FMA:72593") "dorsal accessory olivary nucleus") AnnotationAssertion(Annotation( "NLXANAT:100310") "dorsal accessory olive") AnnotationAssertion(Annotation( "FMA:72593") "inferior olivary complex, dorsal accessory olive") AnnotationAssertion(Annotation( "FMA:72593") "inferior olive, dorsal nucleus") AnnotationAssertion(Annotation( "FMA:72593") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "nucleus olivaris accessorius posterior") AnnotationAssertion(Annotation( "FMA:72593") "posterior accessory olivary nucleus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BAMS:IOda") "inferior olivary complex dorsalaccessory nucleus") AnnotationAssertion(Annotation( "BAMS:IOD") "inferior olive dorsal nucleus") AnnotationAssertion( "UBERON:0007249") AnnotationAssertion(rdfs:label "dorsal accessory inferior olivary nucleus") SubClassOf( ) # Class: (lingual tonsil) AnnotationAssertion(Annotation( "MGI:cwg"^^xsd:string) Annotation( "MP:0002385") "The lymph tissue on the floor of the oropharyngeal passage, near the root of the tongue.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:54836") AnnotationAssertion( "MA:0000773") AnnotationAssertion( "NCIT:C32988") AnnotationAssertion(Annotation( "ncithesaurus:Lingual_Tonsil") "UMLS:C0229871") AnnotationAssertion(Annotation( "MA:0000773") "lingual tonsillar tissue") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "tonsilla lingualis") AnnotationAssertion( "UBERON:0007250") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "lingual tonsil") AnnotationAssertion( "Illu04:tongue.jpg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA-abduced-lr"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (preoptic nucleus) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A nucleus of brain that is part of a preoptic area.") AnnotationAssertion(Annotation( "Hardisty, p. 320-1") ) AnnotationAssertion( "CALOHA:TS-0822") AnnotationAssertion( "EV:0100226") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007251") AnnotationAssertion(rdfs:label "preoptic nucleus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (intervertebral disk of cervical vertebra) AnnotationAssertion(Annotation( ) "An intervertebral disk that is part of a cervical region of vertebral column. A cervical intervertebral disk connects at least one cervical vertebra, either to another cervical vertebra, or at one point on the vertebral colummn, to a thoracic vertebra.") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:19415") AnnotationAssertion( "FMA:13895") AnnotationAssertion(Annotation( "FMA:13895") "cervical intervertebral disc") AnnotationAssertion(Annotation( "EMAPA:19415") "intervertebral disc of cervical region") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007252") AnnotationAssertion(rdfs:label "intervertebral disk of cervical vertebra") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (intervertebral disk of thoracic vertebra) AnnotationAssertion(Annotation( ) "An intervertebral disk that is part of a thoracic region of vertebral column. A thoracic intervertebral disk connects at least one thoracic vertebra, either to another thoracic vertebra, or at one point on the vertebral colummn, to a lumbar vertebra.") AnnotationAssertion( "EMAPA:19489") AnnotationAssertion( "FMA:10455") AnnotationAssertion(Annotation( "EMAPA:19489") "intervertebral disc of thoracic region") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007254") AnnotationAssertion(rdfs:label "intervertebral disk of thoracic vertebra") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (intervertebral disk of lumbar vertebra) AnnotationAssertion(Annotation( ) "An intervertebral disk that is part of a lumbar region of vertebral column. A lumbar intervertebral disk connects at least one lumbar vertebra, either to another thoracic vertebra, or at one point on the vertebral colummn, to a sacral vertebra.") AnnotationAssertion( "EMAPA:19468") AnnotationAssertion( "FMA:13894") AnnotationAssertion(Annotation( "EMAPA:19468") "intervertebral disc of lumbar region") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007255") AnnotationAssertion(rdfs:label "intervertebral disk of lumbar vertebra") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (intervertebral disk of sacral vertebra) AnnotationAssertion(Annotation( ) "An intervertebral disk that is part of a sacral region of vertebral column. A sacral intervertebral disk connects at least one sacral vertebra, either to another thoracic vertebra, or at one point on the vertebral colummn, to a sacral vertebra.") AnnotationAssertion( "EMAPA:19575") AnnotationAssertion( "FMA:268676") AnnotationAssertion(Annotation( "EMAPA:19575") "intervertebral disc of sacral region") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007257") AnnotationAssertion(rdfs:label "intervertebral disk of sacral vertebra") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (intervertebral disk of third cervical vertebra) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An intervertebral disk that connects a mammalian cervical vertebra 3 and connects a mammalian cervical vertebra 4.") AnnotationAssertion( "EMAPA:19422") AnnotationAssertion( "FMA:13896") AnnotationAssertion(Annotation( "FMA:13896") "C3 intervertebral disk") AnnotationAssertion(Annotation( "FMA:13896") "intervertebral disk, C3-C4") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007260") AnnotationAssertion(rdfs:label "intervertebral disk of third cervical vertebra") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (intervertebral disk of fourth cervical vertebra) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An intervertebral disk that connects a mammalian cervical vertebra 4 and connects a mammalian cervical vertebra 5.") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:19425") AnnotationAssertion( "FMA:13897") AnnotationAssertion(Annotation( "FMA:13897") "intervertebral disc of fourth cervical vertebra") AnnotationAssertion(Annotation( "FMA:13897") "intervertebral disk, C4-C5") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007261") AnnotationAssertion(rdfs:label "intervertebral disk of fourth cervical vertebra") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (intervertebral disk of fifth cervical vertebra) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An intervertebral disk that connects a mammalian cervical vertebra 5 and connects a mammalian cervical vertebra 6.") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:19428") AnnotationAssertion( "FMA:13898") AnnotationAssertion(Annotation( "FMA:13898") "intervertebral disc of fifth cervical vertebra") AnnotationAssertion(Annotation( "FMA:13898") "intervertebral disk, C5-C6") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007262") AnnotationAssertion(rdfs:label "intervertebral disk of fifth cervical vertebra") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (intervertebral disk of sixth cervical vertebra) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An intervertebral disk that connects a mammalian cervical vertebra 6 and connects a mammalian cervical vertebra 7.") AnnotationAssertion( "EMAPA:19460") AnnotationAssertion( "FMA:13899") AnnotationAssertion(Annotation( "FMA:13899") "intervertebral disk, C6-C7") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007263") AnnotationAssertion(rdfs:label "intervertebral disk of sixth cervical vertebra") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (intervertebral disk of seventh cervical vertebra) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An intervertebral disk that connects a thoracic vertebra and connects a mammalian cervical vertebra 7.") AnnotationAssertion( "EMAPA:19463") AnnotationAssertion( "FMA:13900") AnnotationAssertion(Annotation( "FMA:13900") "intervertebral disk, C7-T1") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007264") AnnotationAssertion(rdfs:label "intervertebral disk of seventh cervical vertebra") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (intervertebral disk of axis) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An intervertebral disk that connects a vertebral bone 2 and connects a mammalian cervical vertebra 3.") AnnotationAssertion( "EMAPA:19419") AnnotationAssertion( "FMA:25058") AnnotationAssertion(Annotation( "FMA:25058") "C2 disk") AnnotationAssertion(Annotation( "FMA:25058") "C2 intervertebral disk") AnnotationAssertion(Annotation( "FMA:25058") "intervertebral disc of cervical vertebra 2") AnnotationAssertion(Annotation( "FMA:25058") "intervertebral disc of second cervical vertebra") AnnotationAssertion(Annotation( "FMA:25058") "intervertebral disk of cervical vertebra 2") AnnotationAssertion(Annotation( "FMA:25058") "intervertebral disk of second cervical vertebra") AnnotationAssertion(Annotation( "FMA:25058") "intervertebral disk, C2-C3") AnnotationAssertion(Annotation( "FMA:25058") "second cervical intervertebral disk") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007265") AnnotationAssertion(rdfs:label "intervertebral disk of axis") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (intervertebral disk of atlas) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An intervertebral disk that connects a vertebral bone 1 and connects a vertebral bone 2.") AnnotationAssertion( "EMAPA:19416") AnnotationAssertion( "C1 disk") AnnotationAssertion( "C1 intervertebral disk") AnnotationAssertion( "first cervical intervertebral disk") AnnotationAssertion( "intervertebral disc of cervical vertebra 1") AnnotationAssertion( "intervertebral disc of first cervical vertebra") AnnotationAssertion( "intervertebral disk of cervical vertebra 1") AnnotationAssertion( "intervertebral disk of first cervical vertebra") AnnotationAssertion( "intervertebral disk, C1-C2") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007266") AnnotationAssertion(rdfs:label "intervertebral disk of atlas") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (trachea pre-cartilage rings) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A pre-cartilage condensation that is part of a trachea.") AnnotationAssertion( "EHDAA2:0002070") AnnotationAssertion( "EHDAA:7082") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007267") AnnotationAssertion(rdfs:label "trachea pre-cartilage rings") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (upper esophageal sphincter) AnnotationAssertion(Annotation( ) "The upper esophageal sphincter (UES) (also called the Pharyngoesophageal sphincter) refers to the superior portion of the esophagus. Unlike the lower esophageal sphincter, it consists of striated muscle and is under conscious control. The primary muscle of the UES is the cricopharyngeus portion of the inferior pharyngeal constrictor. During swallowing the upper esophageal sphincter opens so the bolus can pass into the esophagus. A secondary role of the UES is to reduce backflow from the esophagus into the pharynx.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:265203") AnnotationAssertion( "NCIT:C33836") AnnotationAssertion(Annotation( "ncithesaurus:Upper_Esophageal_Sphincter") "UMLS:C1451819") AnnotationAssertion(Annotation( ) "pharyngoesophageal sphincter") AnnotationAssertion( "upper esophageal sphincter muscle") AnnotationAssertion(Annotation( ) "upper oesophageal sphincter") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007268") AnnotationAssertion(rdfs:label "upper esophageal sphincter") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/2/22/Musculusconstrictorpharyngisinferior.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) # Class: (pectoral appendage musculature) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "Any collection of muscles that is part of a pectoral appendage.") AnnotationAssertion( "currently defined by location rather than attachment") AnnotationAssertion( "EFO:0003540") AnnotationAssertion( "TAO:0000563") AnnotationAssertion( "ZFA:0000563") AnnotationAssertion(Annotation( "ZFA:0000563") "pectoral fin muscle") AnnotationAssertion(Annotation( "ZFA:0000563") Annotation( ) "pectoral fin musculature") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007269") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "pectoral appendage musculature") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pelvic appendage musculature) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "Any collection of muscles that is part of a pelvic appendage.") AnnotationAssertion( "currently defined by location rather than attachment") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0000258") Annotation( "TAO"^^xsd:string) Annotation( "TAO:curator") "Musculature that is part of the pelvic fin.[TAO]") AnnotationAssertion( "TAO:0000258") AnnotationAssertion( "ZFA:0000258") AnnotationAssertion(Annotation( "ZFA:0000258") Annotation( ) "pelvic fin musculature") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007270") AnnotationAssertion(rdfs:label "pelvic appendage musculature") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (appendage musculature) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "Any collection of muscles that is part of an appendage.") AnnotationAssertion( "currently defined by location rather than attachment") AnnotationAssertion( "TAO:0000207") AnnotationAssertion( "ZFA:0000207") AnnotationAssertion(Annotation( "ZFA:0000207") Annotation( ) "fin musculature") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007271") AnnotationAssertion(rdfs:label "appendage musculature") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pectoral appendage skeleton) AnnotationAssertion(Annotation( "VSAO:0005000") Annotation( "VSAO:NI"^^xsd:string) "Skeletal subdivision consisting of the anterior appendicular limb skeleton, excluding the pectoral girdle.") AnnotationAssertion( "VSAO:0005000") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "VSAO:0005000") Annotation( "VSAO:NI"^^xsd:string) "cheiropterygium") AnnotationAssertion( "UBERON:0007272") AnnotationAssertion(rdfs:label "pectoral appendage skeleton") SubClassOf( ) SubClassOf(Annotation( "VSAO"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pelvic appendage skeleton) AnnotationAssertion(Annotation( ) "The collection of all skeletal elements in a pelvic appendage region.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007273") AnnotationAssertion(rdfs:label "pelvic appendage skeleton") SubClassOf( ) SubClassOf(Annotation( "VSAO"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (crista of ampulla of anterior semicircular duct of membranous laybrinth) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A crista ampullaris neuroepithelium that is part of a anterior semicircular duct.") AnnotationAssertion( "TODO - unvetted") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0000619") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "Patches of thickened, pseudostratified epithelium of the inner ear, consisting of regular arrays of sensory hair cells interspersed with supporting cells. Each patch has its own charcteristic shape and polarity pattern. (See Anatomical Atlas entry for sensory patches of the ear by T. Whitfield.)[TAO]") AnnotationAssertion( "FMA:75610") AnnotationAssertion( "TAO:0000619") AnnotationAssertion( "XAO:0004137") AnnotationAssertion( "ZFA:0000619") AnnotationAssertion(Annotation( "ZFA:0000619") "anterior crista ampullaris") AnnotationAssertion(Annotation( "ZFA:0000619") Annotation( ) "anterior cristae") AnnotationAssertion(Annotation( "ZFA:0000619") "anterior semicircular canal sensory patch") AnnotationAssertion(Annotation( "ZFA:0000619") Annotation( ) "anterior semicircular canal sensory patches") AnnotationAssertion(Annotation( "ZFA:0000619") "rostral crista") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "TAO:0000619") "AC") AnnotationAssertion(Annotation( "TAO:0000619") "anterior crista") AnnotationAssertion(Annotation( "TAO:0000619") "sensory patches") AnnotationAssertion( "UBERON:0007274") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "crista of ampulla of anterior semicircular duct of membranous laybrinth") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "Phenoscape") ObjectSomeValuesFrom( )) DisjointClasses(Annotation( "lexical"^^xsd:string) ) # Class: (crista of ampulla of posterior semicircular duct of membranous laybrinth) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A crista ampullaris neuroepithelium that is part of a posterior semicircular duct.") AnnotationAssertion( "TODO - unvetted") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0000566") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "Patches of thickened, pseudostratified epithelium of the inner ear, consisting of regular arrays of sensory hair cells interspersed with supporting cells. Each patch has its own charcteristic shape and polarity pattern. (See Anatomical Atlas entry for sensory patches of the ear by T. Whitfield.)[TAO]") AnnotationAssertion( "FMA:75611") AnnotationAssertion( "TAO:0000566") AnnotationAssertion( "XAO:0004133") AnnotationAssertion( "ZFA:0000566") AnnotationAssertion(Annotation( "ZFA:0000566") "caudal crista") AnnotationAssertion(Annotation( "ZFA:0000566") "posterior crista ampullaris") AnnotationAssertion(Annotation( "ZFA:0000566") Annotation( ) "posterior cristae") AnnotationAssertion(Annotation( "ZFA:0000566") "posterior semicircular canal sensory patch") AnnotationAssertion(Annotation( "ZFA:0000566") Annotation( ) "posterior semicircular canal sensory patches") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "TAO:0000566") "PC") AnnotationAssertion(Annotation( "TAO:0000566") "posterior crista") AnnotationAssertion(Annotation( "TAO:0000566") "sensory patches") AnnotationAssertion( "UBERON:0007275") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "crista of ampulla of posterior semicircular duct of membranous laybrinth") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (crista of ampulla of lateral semicircular duct of membranous laybrinth) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A crista ampullaris neuroepithelium that is part of a lateral semicircular duct.") AnnotationAssertion( "TODO - unvetted") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0000166") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "Patches of thickened, pseudostratified epithelium of the inner ear, consisting of regular arrays of sensory hair cells interspersed with supporting cells. Each patch has its own charcteristic shape and polarity pattern. (See Anatomical Atlas entry for sensory patches of the ear by T. Whitfield.)[TAO]") AnnotationAssertion( "FMA:75612") AnnotationAssertion( "TAO:0000166") AnnotationAssertion( "ZFA:0000166") AnnotationAssertion(Annotation( "ZFA:0000166") "lateral crista ampullaris") AnnotationAssertion(Annotation( "ZFA:0000166") Annotation( ) "lateral cristae") AnnotationAssertion(Annotation( "ZFA:0000166") "lateral semicircular canal sensory patch") AnnotationAssertion(Annotation( "ZFA:0000166") Annotation( ) "lateral semicircular canal sensory patches") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "TAO:0000166") "LC") AnnotationAssertion(Annotation( "TAO:0000166") "lateral crista") AnnotationAssertion(Annotation( "TAO:0000166") "sensory patches") AnnotationAssertion( "UBERON:0007276") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "crista of ampulla of lateral semicircular duct of membranous laybrinth") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (presumptive hindbrain) AnnotationAssertion(Annotation( ) "The rhombencephalon (or hindbrain) is a developmental categorization of portions of the central nervous system in vertebrates. The rhombencephalon can be subdivided in a variable number of transversal swellings called rhombomeres. In the human embryo eight rhombomeres can be distinguished, from caudal to rostral: Rh7-Rh1 and the isthmus (the most rostral rhombomere). A rare disease of the rhombencephalon, 'rhombencephalosynapsis' is characterized by a missing vermis resulting in a fused cerebellum. Patients generally present with cerebellar ataxia. The caudal rhombencephalon has been generally considered as the initiation site for neural tube closure.") AnnotationAssertion( "TODO - unify naming conventions") AnnotationAssertion(Annotation( "NPX:PDR") "The embryonic rhombencephalon can be subdivided in a variable number of transversal swellings called rhombomeres. Rhombomeres Rh7-Rh4 form the myelencephalon that will give the medulla oblongata. Rhombomeres Rh3-Rh1 form the metencephalon that will form the pons and the cerebellum[NPX:PDR].") AnnotationAssertion( ) AnnotationAssertion( "BAMS:HB") AnnotationAssertion( "CALOHA:TS-2118") AnnotationAssertion( "EFO:0003440") AnnotationAssertion( "EHDAA2:0001630") AnnotationAssertion( "FMA:295640") AnnotationAssertion( "TAO:0000569") AnnotationAssertion( "ZFA:0000569") AnnotationAssertion(Annotation( "ZFA:0000569") "presumptive rhombencephalon") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "CALOHA:TS-2118") "embryonic rhombencephalon") AnnotationAssertion(Annotation( ) "future hindbrain") AnnotationAssertion(Annotation( "EHDAA2:0001630") "rhombencephalon") AnnotationAssertion( "UBERON:0007277") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "presumptive hindbrain") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "XAO-abduced") ObjectSomeValuesFrom( )) SubClassOf(Annotation( "cjm"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (presumptive sinus venosus) AnnotationAssertion(Annotation( "ZFA:0001722") "Portion of tissue that is part of the heart tube and will become the sinus venosus.") AnnotationAssertion( "TAO:0002234") AnnotationAssertion( "ZFA:0001722") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007278") AnnotationAssertion(rdfs:label "presumptive sinus venosus") SubClassOf( ) SubClassOf(Annotation( "ZFA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (presumptive atrioventricular canal) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A presumptive structure that has the potential to develop into a atrioventricular canal.") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0002227") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "Portion of tissue that is part of the heart tube and will become the atrioventricular canal.[TAO]") AnnotationAssertion( "TAO:0002227") AnnotationAssertion( "ZFA:0001723") AnnotationAssertion( "future AV canal") AnnotationAssertion( "future atrioventricular canal") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007279") AnnotationAssertion(rdfs:label "presumptive atrioventricular canal") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (presumptive endocardium) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A presumptive structure that has the potential to develop into a endocardium.") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0002233") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "Portion of tissue that is part of the heart tube and will become the endocardium.[TAO]") AnnotationAssertion( "TAO:0002233") AnnotationAssertion( "ZFA:0001724") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007280") AnnotationAssertion(rdfs:label "presumptive endocardium") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (presumptive midbrain hindbrain boundary) AnnotationAssertion(Annotation( "ZFA:0001187") "Embryonic structure that gives rise to the midbrain hindbrain boundary.") AnnotationAssertion( "EFO:0003446") AnnotationAssertion( "TAO:0001187") AnnotationAssertion( "XAO:0004086") AnnotationAssertion( "ZFA:0001187") AnnotationAssertion(Annotation( ) "presumptive MHB") AnnotationAssertion(Annotation( "ZFA:0001187") "presumptive midbrain-hindbrain boundary") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007281") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "presumptive midbrain hindbrain boundary") SubClassOf( ) SubClassOf(Annotation( "ZFA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (presumptive segmental plate) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A presumptive structure that has the potential to develop into a presomitic mesoderm.") AnnotationAssertion( "EFO:0003421") AnnotationAssertion( "TAO:0000053") AnnotationAssertion( "ZFA:0000053") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "ZFA:0000053") Annotation( ) "presumptive segmental plates") AnnotationAssertion( "UBERON:0007282") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "presumptive segmental plate") SubClassOf( ) SubClassOf(Annotation( "https://github.com/obophenotype/uberon/wiki/The-neural-crest") Annotation( "EDHAA2") ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (presumptive shield) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A presumptive structure that has the potential to develop into a primitive knot.") AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Presumptive structure fated to become the shield. Defined by fate mapping[ZFIN:curator].") AnnotationAssertion( "EFO:0003444") AnnotationAssertion( "TAO:0001121") AnnotationAssertion( "ZFA:0001121") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007283") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "presumptive shield") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (presumptive neural plate) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A presumptive structure that has the potential to develop into a neural plate.") AnnotationAssertion( "consider merging") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0000063") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "Region of the gastrula which gives rise to the neural plate.[TAO]") AnnotationAssertion( "EFO:0003424") AnnotationAssertion( "TAO:0000063") AnnotationAssertion( "ZFA:0000063") AnnotationAssertion(Annotation( "ZFA:0000063") "prospective neuroectoderm") AnnotationAssertion(Annotation( "ZFA:0000063") "prospective vegetal ectoderm") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007284") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "presumptive neural plate") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (presumptive paraxial mesoderm) AnnotationAssertion(Annotation( ) Annotation( "UBERON:cjm"^^xsd:string) "The part of the blastula that has the potential to develop into a paraxial mesoderm.") AnnotationAssertion( "EFO:0003443") AnnotationAssertion( "TAO:0000591") AnnotationAssertion( "XAO:0004134") AnnotationAssertion( "ZFA:0000591") AnnotationAssertion(Annotation( "UBERON:cjm"^^xsd:string) "future paraxial mesenchyme") AnnotationAssertion( "future paraxial mesoderm") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007285") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "presumptive paraxial mesoderm") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (presumptive floor plate) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A presumptive structure that has the potential to develop into a floor plate.") AnnotationAssertion( "EFO:0003454") AnnotationAssertion( "TAO:0001218") AnnotationAssertion( "ZFA:0001218") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007286") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "presumptive floor plate") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (presumptive bulbus arteriosus) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A presumptive structure that has the potential to develop into a bulbus arteriosus.") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0002230") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "Portion of tissue that is part of the heart tube and will become the bulbus arteriosus.[TAO]") AnnotationAssertion( "TAO:0002230") AnnotationAssertion( "ZFA:0001712") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007287") AnnotationAssertion(rdfs:label "presumptive bulbus arteriosus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (presumptive forebrain midbrain boundary) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A presumptive structure that has the potential to develop into a forebrain-midbrain boundary.") AnnotationAssertion( "EFO:0003463") AnnotationAssertion( "TAO:0001368") AnnotationAssertion( "ZFA:0001368") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007288") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "presumptive forebrain midbrain boundary") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (presumptive rhombomere 1) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A presumptive structure that has the potential to develop into a rhombomere 1.") AnnotationAssertion( "TAO:0001207") AnnotationAssertion( "ZFA:0001207") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007289") AnnotationAssertion(rdfs:label "presumptive rhombomere 1") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (presumptive rhombomere 3) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A presumptive structure that has the potential to develop into a rhombomere 3.") AnnotationAssertion( "EFO:0003451") AnnotationAssertion( "TAO:0001213") AnnotationAssertion( "ZFA:0001213") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007290") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "presumptive rhombomere 3") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (presumptive rhombomere 4) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A presumptive structure that has the potential to develop into a rhombomere 4.") AnnotationAssertion( "EFO:0003450") AnnotationAssertion( "TAO:0001212") AnnotationAssertion( "ZFA:0001212") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007291") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "presumptive rhombomere 4") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (presumptive rhombomere 5) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A presumptive structure that has the potential to develop into a rhombomere 5.") AnnotationAssertion( "EFO:0003449") AnnotationAssertion( "TAO:0001211") AnnotationAssertion( "ZFA:0001211") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007292") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "presumptive rhombomere 5") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (presumptive rhombomere 6) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A presumptive structure that has the potential to develop into a rhombomere 6.") AnnotationAssertion( "EFO:0003448") AnnotationAssertion( "TAO:0001210") AnnotationAssertion( "ZFA:0001210") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007293") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "presumptive rhombomere 6") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (presumptive rhombomere 7) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A presumptive structure that has the potential to develop into a rhombomere 7.") AnnotationAssertion( "EFO:0003447") AnnotationAssertion( "TAO:0001209") AnnotationAssertion( "ZFA:0001209") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007294") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "presumptive rhombomere 7") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (presumptive rhombomere 8) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A presumptive structure that has the potential to develop into a rhombomere 8.") AnnotationAssertion( "EFO:0003452") AnnotationAssertion( "TAO:0001214") AnnotationAssertion( "ZFA:0001214") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007295") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "presumptive rhombomere 8") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (presumptive rhombomere 2) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A presumptive structure that has the potential to develop into a rhombomere 2.") AnnotationAssertion( "TAO:0001208") AnnotationAssertion( "ZFA:0001208") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007296") AnnotationAssertion(rdfs:label "presumptive rhombomere 2") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (presumptive pronephric mesoderm) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A presumptive structure that has the potential to develop into a pronephric mesoderm.") AnnotationAssertion( "EFO:0003619") AnnotationAssertion( "TAO:0001070") AnnotationAssertion( "ZFA:0001070") AnnotationAssertion(Annotation( "ZFA:0001070") "nephron primordium") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007297") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "presumptive pronephric mesoderm") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pronephric proximal convoluted tubule) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A proximal convoluted tubule that is part of a pronephros.") AnnotationAssertion( "TAO:0002238") AnnotationAssertion( "ZFA:0001620") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007298") AnnotationAssertion(rdfs:label "pronephric proximal convoluted tubule") SubClassOf( ) SubClassOf( ) # Class: (choroid plexus of tectal ventricle) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A choroid plexus that is part of a cerebral aqueduct.") AnnotationAssertion( "TAO:0001445") AnnotationAssertion( "ZFA:0001445") AnnotationAssertion(Annotation( "ZFA:0001445") "choroid plexus tectal ventricle") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "ZFA:0001445") Annotation( ) "choroid plexus tectal ventricles") AnnotationAssertion( "UBERON:0007299") AnnotationAssertion(rdfs:label "choroid plexus of tectal ventricle") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pectoral appendage blood vessel) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A blood vessel that is part of a pectoral appendage.") AnnotationAssertion( "TAO:0005301") AnnotationAssertion( "ZFA:0005301") AnnotationAssertion(Annotation( "ZFA:0005301") Annotation( ) "pectoral fin blood vessel") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007300") AnnotationAssertion(rdfs:label "pectoral appendage blood vessel") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (appendage blood vessel) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A blood vessel that is part of a limb/fin.") AnnotationAssertion( "TAO:0005299") AnnotationAssertion( "ZFA:0005299") AnnotationAssertion(Annotation( "ZFA:0005299") Annotation( ) "fin blood vessel") AnnotationAssertion(Annotation( ) "limb blood vessel") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007301") AnnotationAssertion(rdfs:label "appendage blood vessel") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pectoral appendage vasculature) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A vasculature that is part of a pectoral appendage.") AnnotationAssertion( "TAO:0005096") AnnotationAssertion( "ZFA:0005096") AnnotationAssertion(Annotation( "ZFA:0005096") Annotation( ) "pectoral fin vasculature") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007302") AnnotationAssertion(rdfs:label "pectoral appendage vasculature") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pharyngeal vasculature) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A vasculature that is part of a chordate pharynx.") AnnotationAssertion( "TAO:0005003") AnnotationAssertion( "ZFA:0005003") AnnotationAssertion(Annotation( "ZFA:0005003") "branchial vasculature") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007303") AnnotationAssertion(rdfs:label "pharyngeal vasculature") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (appendage vasculature) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A vasculature that is part of a limb/fin.") AnnotationAssertion( "TAO:0005095") AnnotationAssertion( "ZFA:0005095") AnnotationAssertion(Annotation( "ZFA:0005095") Annotation( ) "fin vasculature") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007304") AnnotationAssertion(rdfs:label "appendage vasculature") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pronephric glomerular capillary) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A glomerular capillary that is part of a pronephros.") AnnotationAssertion( "TAO:0005309") AnnotationAssertion( "ZFA:0005309") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007306") AnnotationAssertion(rdfs:label "pronephric glomerular capillary") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pronephric glomerular basement membrane) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A glomerular basement membrane that is part of a pronephros.") AnnotationAssertion( "TAO:0005313") AnnotationAssertion( "ZFA:0005313") AnnotationAssertion(Annotation( "ZFA:0005313") "pronephric glomerular filtration membrane") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007307") AnnotationAssertion(rdfs:label "pronephric glomerular basement membrane") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pronephric distal early tubule) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A distal early tubule that is part of a pronephros.") AnnotationAssertion( "TAO:0002236") AnnotationAssertion( "ZFA:0001622") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "ZFA:0001622") Annotation( ) "pronephric distal early tubules") AnnotationAssertion( "UBERON:0007308") AnnotationAssertion(rdfs:label "pronephric distal early tubule") SubClassOf( ) SubClassOf( ) # Class: (sputum) AnnotationAssertion(Annotation( "Dorlands_Medical_Dictionary:MerckSource") "Matter ejected from the lungs, bronchi, and trachea, through the mouth.") AnnotationAssertion( ) AnnotationAssertion( "BTO:0001297") AnnotationAssertion( "CALOHA:TS-0963") AnnotationAssertion( "EMAPA:36553") AnnotationAssertion( "FMA:312401") AnnotationAssertion( "GAID:1171") AnnotationAssertion( "MA:0002536") AnnotationAssertion( "MESH:D013183") AnnotationAssertion( "NCIT:C13278") AnnotationAssertion(Annotation( "ncithesaurus:Sputum") "UMLS:C0038056") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0001297") "expectoration") AnnotationAssertion( "UBERON:0007311") AnnotationAssertion(rdfs:label "sputum") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pudendal artery) AnnotationAssertion(Annotation( ) "Either the internal or external pudendal arteries.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37111") AnnotationAssertion( "MA:0002028") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007312") AnnotationAssertion(rdfs:label "pudendal artery") SubClassOf( ) # Class: (superior external pudendal artery) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37119") AnnotationAssertion( "MA:0002029") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007314") AnnotationAssertion(rdfs:label "superior external pudendal artery") SubClassOf( ) # Class: (internal pudendal artery) AnnotationAssertion(Annotation( ) "The internal pudendal artery is an artery that branches off the internal iliac artery, providing blood to the external genitalia. The internal pudendal artery is the terminal branch of the anterior trunk of the internal iliac artery. It is smaller in the female than in the male.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:18835") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "arteria pudenda interna") AnnotationAssertion(Annotation( ) "internal pudendal vessels") AnnotationAssertion(Annotation( ) "internal pudic artery") AnnotationAssertion( "UBERON:0007315") AnnotationAssertion(rdfs:label "internal pudendal artery") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/3/3a/Gray1244.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA-abduced-lr"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (deep external pudendal artery) AnnotationAssertion(Annotation( ) "The deep external pudendal artery (deep external pudic artery), more deeply seated than the superficial external pudendal artery, passes medialward across the Pectineus and the Adductor longus muscles; it is covered by the fascia lata, which it pierces at the medial side of the thigh, and is distributed, in the male, to the integument of the scrotum and perineum, in the female to the labium majus; its branches anastomose with the scrotal (or labial) branches of the perineal artery.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:20739") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "arteria pudenda externa profunda") AnnotationAssertion( "UBERON:0007316") AnnotationAssertion(rdfs:label "deep external pudendal artery") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/4/43/Gray549.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) # Class: (superficial external pudendal artery) AnnotationAssertion(Annotation( ) "An artery that arises from the medial side of the femoral artery, close to the superficial epigastric artery and superficial iliac circumflex artery.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:20738") AnnotationAssertion( "superficial external pudic artery") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "arteria pudenda externa superficialis") AnnotationAssertion( "UBERON:0007317") AnnotationAssertion(rdfs:comment "After piercing the femoral sheath and fascia cribrosa, it courses medialward, across the spermatic cord (or round ligament in the female), to be distributed to the integument on the lower part of the abdomen, the penis and scrotum in the male, and the labium majus in the female, anastomosing with branches of the internal pudendal artery. it crosses superficial to the inguinal ligament[WP]") AnnotationAssertion(rdfs:label "superficial external pudendal artery") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/4/43/Gray549.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (saphenous vein) AnnotationAssertion(Annotation( "BTO:0001808") "Either of two main superficial veins of the leg, one larger than the other, that begin at the foot.") AnnotationAssertion( ) AnnotationAssertion( "BTO:0001808") AnnotationAssertion( "CALOHA:TS-0893") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37186") AnnotationAssertion( "MA:0002215") AnnotationAssertion( "MESH:D012501") AnnotationAssertion( "NCIT:C33511") AnnotationAssertion(Annotation( "ncithesaurus:Saphenous_Vein") "UMLS:C0036186") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007318") AnnotationAssertion(rdfs:label "saphenous vein") SubClassOf( ) SubClassOf( ) # Class: (medial saphenous vein) AnnotationAssertion( "TODO - check") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37172") AnnotationAssertion( "FMA:44322") AnnotationAssertion( "MA:0002173") AnnotationAssertion(Annotation( "FMA:44322") "medial accessory saphenous vein") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007319") AnnotationAssertion(rdfs:label "medial saphenous vein") SubClassOf( ) DisjointClasses(Annotation( "lexical"^^xsd:string) ) # Class: (lateral saphenous vein) AnnotationAssertion( "TODO - check") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37162") AnnotationAssertion( "FMA:44321") AnnotationAssertion( "MA:0002161") AnnotationAssertion(Annotation( "FMA:44321") "lateral accessory saphenous vein") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007321") AnnotationAssertion(rdfs:label "lateral saphenous vein") SubClassOf( ) # Class: (pancreatic lobule) AnnotationAssertion(Annotation( "ISBN:0123813611"^^xsd:string) "A dense accumulation of exocrine glands in the pancreas often surrounding islets of Langerhans.") AnnotationAssertion( "TODO - check") AnnotationAssertion( "In mice many lobules lack islets, in contrast to other mammals including humans") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37710") AnnotationAssertion( "FMA:16012") AnnotationAssertion( "MA:0000721") AnnotationAssertion(Annotation( "FMA:16012") "lobulus pancreaticus") AnnotationAssertion(Annotation( "MA:0000721") "pancreas lobe") AnnotationAssertion(Annotation( "FMA:16012") "pancreatic lobule") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007324") AnnotationAssertion(rdfs:label "pancreatic lobule") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pancreatic duct) AnnotationAssertion(Annotation( ) Annotation( ) Annotation( ) Annotation( ) Annotation( ) Annotation( "GOC:cvs") Annotation( "GOC:ymb") "A duct that collects and carries secretions of the exocrine pancreas to the intestine.") AnnotationAssertion( "this class groups together accessory (dorsal) and main (ventral) pancreatic ducts") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000254") Annotation( "VHOG"^^xsd:string) Annotation( ) "Duct connecting the pancreas with the intestine. [Dorian_AF, Elsevier's_encyclopaedic_dictionary_of_medicine, Part_B:_Anatomy_(1988)_Amsterdam_etc.:_Elsevier][VHOG]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000254") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "DOI:10.1016/j.ydbio.2005.04.035 Yee NS, Lorent K, Pack M, Exocrine pancreas development in zebrafish. Developmental Biology (2005)") "These data show that ducts within the zebrafish pancreas originally arise in situ from isolated progenitor cells rather than arising from reiterative branching of the pancreatic epithelium. This process of pancreatic duct formation in zebrafish may be analogous to the mechanism of duct formation in the mammalian mammary and salivary glands. (...) A related mechanism of duct formation has also been proposed to occur within the mammalian pancreatic epithelium.[uncertain][VHOG]") AnnotationAssertion(Annotation( "EHDAA2"^^xsd:string) "in EHDAA2, the dorsal and ventral ducts are classified as epithelial sacs - review after overhaul of duct/epithelia terms") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EHDAA:9194") AnnotationAssertion( "EMAPA:32952") AnnotationAssertion( "FMA:10419") AnnotationAssertion( "MA:0000124") AnnotationAssertion( "TAO:0001372") AnnotationAssertion( "VHOG:0000254") AnnotationAssertion( "ZFA:0001372") AnnotationAssertion(Annotation( "OBOL:accepted"^^xsd:string) "duct of pancreas") AnnotationAssertion(Annotation( "OBOL:accepted"^^xsd:string) "pancreas duct") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "ductus pancreaticus") AnnotationAssertion( "UBERON:0007329") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "pancreatic duct") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/1/15/Gray1100.png"^^xsd:anyURI) SubClassOf(Annotation( "ZFA"^^xsd:string) ) SubClassOf( ) SubClassOf(Annotation( "MA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (mesopallium) AnnotationAssertion( "BTO:0003405") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0003405") "middle pallium") AnnotationAssertion( "UBERON:0007349") AnnotationAssertion(rdfs:label "mesopallium") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (stria vascularis vasculature) AnnotationAssertion(Annotation( "MP:0004368") "Blood vessels supplying the stria vascularis in the cochlea of the inner ear.") AnnotationAssertion( "stria vascularis blood vessels") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "MP:0004368") "stria vascularis blood vessel") AnnotationAssertion( "UBERON:0007352") AnnotationAssertion(rdfs:label "stria vascularis vasculature") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (cartilage of pharyngotympanic tube) AnnotationAssertion(Annotation( ) Annotation( ) "A triangular plate of elastic fibrocartilage that forms the cartilage component of the pharyngotympanic tube.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:60096") AnnotationAssertion(Annotation( "FMA:60096") "cartilage of auditory tube") AnnotationAssertion(Annotation( "FMA:60096") "cartilage of eustachian tube") AnnotationAssertion(Annotation( "FMA:60096") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "cartilago tubae auditivae") AnnotationAssertion(Annotation( "FMA:60096") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "cartilago tubae auditoriae") AnnotationAssertion(Annotation( "FMA:60096") "pharyngotympanic tube cartilage") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "cartilago tubae auditivae; cartilago tubae auditoriae") AnnotationAssertion( "UBERON:0007354") AnnotationAssertion(rdfs:label "cartilage of pharyngotympanic tube") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/b/b9/Gray915.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (bony part of pharyngotympanic tube) AnnotationAssertion(Annotation( ) "The bony part of pharyngotympanic tube is about 12 mm. in length. It begins in the carotid wall of the tympanic cavity, below the septum canalis musculotubarii, and, gradually narrowing, ends at the angle of junction of the squama and the petrous portion of the temporal bone, its extremity presenting a jagged margin which serves for the attachment of the cartilaginous portion.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:60057") AnnotationAssertion(Annotation( "FMA:60057") "bony part of auditory tube") AnnotationAssertion(Annotation( "FMA:60057") "bony part of eustachian tube") AnnotationAssertion(Annotation( "FMA:60057") "osseous portion of eustachian tube") AnnotationAssertion(Annotation( "FMA:60057") "pars ossea (tuba auditiva)") AnnotationAssertion(Annotation( "FMA:60057") "pars ossea (tuba auditoria)") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "osseous portion") AnnotationAssertion(Annotation( ) Annotation( ) "pars ossea tubae auditivae") AnnotationAssertion( "UBERON:0007355") AnnotationAssertion(rdfs:label "bony part of pharyngotympanic tube") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/9/9d/Gray911.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (surface of tongue) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An anatomical surface that is part of a tongue.") AnnotationAssertion( ) AnnotationAssertion( "FMA:54647") AnnotationAssertion(Annotation( "FMA:54647") "tongue surface") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007367") AnnotationAssertion(rdfs:label "surface of tongue") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (superior surface of tongue) AnnotationAssertion(Annotation( ) "The upper (superior) side of the tongue.") AnnotationAssertion( "check superior/dorsal") AnnotationAssertion( "FMA:54646") AnnotationAssertion(Annotation( "FMA:54646") "dorsal surface of tongue") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007371") AnnotationAssertion(rdfs:label "superior surface of tongue") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (inferior surface of tongue) AnnotationAssertion(Annotation( ) "The lower (inferior) side of the tongue.") AnnotationAssertion( "check inferior/ventral") AnnotationAssertion( ) AnnotationAssertion( "FMA:54648") AnnotationAssertion(Annotation( "FMA:54648") "ventral surface of tongue") AnnotationAssertion( "ventrum linguae") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007373") AnnotationAssertion(rdfs:label "inferior surface of tongue") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (incus cartilage element) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An incus endochondral element that is composed primarily of cartilage tissue.") AnnotationAssertion( "EMAPA:18228") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007374") AnnotationAssertion(rdfs:label "incus cartilage element") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (roof of mouth) AnnotationAssertion(Annotation( ) "A multi-tissue structure consisting of bone and soft tissue that forms a part of the roof of the oral cavity. In mammals this is the combination of the primary palate (premaxilla) and the secondary palate. In early tetrapods it consists of the vomer, pterygoid, parasphenoid, palatine and ectopterygoid bones.") AnnotationAssertion( "check subclasses to verify if they refer to a multi-tissue structure or a subdivision of the skeleton") AnnotationAssertion( ) AnnotationAssertion( "CALOHA:TS-2212") AnnotationAssertion( "roof of buccal cavity") AnnotationAssertion( "roof of oral cavity") AnnotationAssertion( "uberon") AnnotationAssertion( "palate") AnnotationAssertion(Annotation( ) "palatum") AnnotationAssertion( "primary or secondary palate") AnnotationAssertion( "UBERON:0007375") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "roof of mouth") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (outer epithelium) AnnotationAssertion(Annotation( "GO:0008544") "The epidermis is the entire outer epithelial layer of an animal, it may be a single layer that produces an extracellular material (e.g. the cuticle of arthropods) or a complex stratified squamous epithelium, as in the case of many vertebrate species[GO].") AnnotationAssertion( "this grouping class exists primarily to align with GO - see GO:0008544.") AnnotationAssertion( ) AnnotationAssertion( "BSA:0000073") AnnotationAssertion( "BTO:0000313") AnnotationAssertion( "FBbt:00004993") AnnotationAssertion( "HAO:0000298") AnnotationAssertion( "TADS:0000109") AnnotationAssertion( "WBbt:0005733") AnnotationAssertion(Annotation( "GO:0008544") "epidermis") AnnotationAssertion( "epidermis (sensu Metazoa)") AnnotationAssertion( "outer epidermal layer") AnnotationAssertion( "outer epithelial layer") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0000313") Annotation( ) "hypoderm") AnnotationAssertion(Annotation( "GO:0008544") Annotation( "WBbt:0005733") Annotation( ) "hypodermis") AnnotationAssertion( "UBERON:0007376") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "outer epithelium") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (stratum compactum of dermis) AnnotationAssertion(Annotation( "ISBN:0073040584"^^xsd:string) Annotation( "ZFIN:ZDB-PUB-040726-12") "Portion of the dermis characterized by a well-arranged, plywood-like, collagenous network.") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0001182") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "Portion of the dermis characterized by a well-arranged, plywood-like, collagenous network. Le Guellec et al, 2004.[TAO]") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0001182") Annotation( "TAO"^^xsd:string) "relationship loss: develops_from collagenous dermal stroma (TAO:0001186)[TAO]") AnnotationAssertion( "connective tissue in the skin is usually diffuse and irregular, although in some species collagen bundles are arranged in a distinct ordered layer in the dermis") AnnotationAssertion( "AAO:0010600") AnnotationAssertion( "TAO:0001182") AnnotationAssertion( "ZFA:0001182") AnnotationAssertion(Annotation( "ZFA:0001182") "dermal deep region") AnnotationAssertion(Annotation( "AAO:0010600") "stratum compactum") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007377") AnnotationAssertion(rdfs:label "stratum compactum of dermis") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (enveloping layer of ectoderm) AnnotationAssertion(Annotation( ) "Outermost layer of cells surrounding the embryo.") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0000086") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "Outermost monolayer of cells surrounding the embryo that become very flattened in the blastula and give rise to the periderm. Sometimes used synonymously with periderm. Kimmel et al, 1995.[TAO]") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0000086") Annotation( "TAO"^^xsd:string) "relationship loss: develops_from superficial blastomere (TAO:0001484)[TAO]") AnnotationAssertion( "Originally this tissue is one cell layer thick but in most vertebrates it soon becomes a two layered structure. The outer layer gives rise to the periderm.") AnnotationAssertion( "EFO:0003425") AnnotationAssertion( "TAO:0000086") AnnotationAssertion( "ZFA:0000086") AnnotationAssertion(Annotation( "ZFA:0000086") "EVL") AnnotationAssertion(Annotation( "ZFIN:ZDB-PUB-961014-576"^^xsd:string) "enveloping layer") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007383") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "enveloping layer of ectoderm") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (appendage lymph vessel) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A lymphatic vessel that is part of a limb/fin.") AnnotationAssertion( "TAO:0005300") AnnotationAssertion( "ZFA:0005300") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007384") AnnotationAssertion(rdfs:label "appendage lymph vessel") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pectoral appendage lymph vessel) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A lymphatic vessel that is part of a pectoral appendage.") AnnotationAssertion( "TAO:0005302") AnnotationAssertion( "ZFA:0005302") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007385") AnnotationAssertion(rdfs:label "pectoral appendage lymph vessel") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pelvic appendage lymph vessel) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A lymphatic vessel that is part of a pelvic appendage.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007386") AnnotationAssertion(rdfs:label "pelvic appendage lymph vessel") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (paired limb/fin cartilage) AnnotationAssertion(Annotation( ) "A cartilage tissue that is part of a paired limb or fin.") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0001543") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "Cartilage which is part of one of the paired fins.[TAO]") AnnotationAssertion( "TAO:0001543") AnnotationAssertion( "ZFA:0001543") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007389") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "paired limb/fin cartilage") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pectoral appendage cartilage tissue) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A cartilage tissue that is part of a pectoral appendage.") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0000257") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "Cartilage which is part of the pectoral fin.[TAO]") AnnotationAssertion( "TAO:0000257") AnnotationAssertion( "ZFA:0000257") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "TAO:0000257") "pectoral fin cartilage") AnnotationAssertion( "UBERON:0007390") AnnotationAssertion(rdfs:label "pectoral appendage cartilage tissue") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pelvic appendage cartilage tissue) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A cartilage tissue that is part of a pelvic appendage.") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0001459") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "Cartilage which is part of the pelvic fin.[TAO]") AnnotationAssertion( "TAO:0001459") AnnotationAssertion( "ZFA:0001459") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "TAO:0001459") "pelvic fin cartilage") AnnotationAssertion( "UBERON:0007391") AnnotationAssertion(rdfs:label "pelvic appendage cartilage tissue") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (midbrain raphe nuclei) AnnotationAssertion(Annotation( "BIRNLEX:1676") "Midline nuclei found in the midbrain, includes the dorsal raphe nucleus and the rostral linear nucleus of raphe.") AnnotationAssertion( "TODO - check. note BTO class is placed here as it is placed in hindbrain") AnnotationAssertion(Annotation( "BTO:0003387") "raphe nucleus") AnnotationAssertion( "BIRNLEX:1676") AnnotationAssertion( "BTO:0003387") AnnotationAssertion( "DHBA:12222") AnnotationAssertion( "EMAPA:35721") AnnotationAssertion( "FMA:77787") AnnotationAssertion( "HBA:9455") AnnotationAssertion( "MA:0003147") AnnotationAssertion( "MBA:165") AnnotationAssertion(Annotation( "BIRNLEX:1676") "midbrain raphe") AnnotationAssertion(Annotation( "BIRNLEX:1676") "midbrain raphe nuclei") AnnotationAssertion(Annotation( "FMA:77787") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "nuclei raphes tegmenti mesencephali") AnnotationAssertion(Annotation( "FMA:77787") "raphe nuclei of tegmentum of midbrain") AnnotationAssertion(Annotation( "FMA:77787") "set of raphe nuclei of tegmentum of midbrain") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007412") AnnotationAssertion(rdfs:label "midbrain raphe nuclei") SubClassOf( ) SubClassOf(Annotation( "NIFSTD"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "Wikipedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (nucleus of pontine reticular formation) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A nucleus of brain that is part of a pontine reticular formation.") AnnotationAssertion( "EMAPA:36642") AnnotationAssertion( "FMA:72245") AnnotationAssertion( "MBA:146") AnnotationAssertion(Annotation( "FMA:72245") "pontine reticular formation nucleus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007413") AnnotationAssertion(rdfs:label "nucleus of pontine reticular formation") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (nucleus of midbrain tegmentum) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A nucleus of brain that spans a midbrain tegmentum.") AnnotationAssertion( "this class groups together any nuclei in the tegmentum region, possibly including disparate structures across species") AnnotationAssertion( "UBERON:0012277") AnnotationAssertion( "FMA:258768") AnnotationAssertion( "ZFA:0005577") AnnotationAssertion(Annotation( ) "tegmental nuclei") AnnotationAssertion(Annotation( "ZFA:0005577") "tegmental nucleus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007414") AnnotationAssertion(rdfs:label "nucleus of midbrain tegmentum") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) # Class: (nucleus of midbrain reticular formation) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A nucleus of midbrain tegmentum that is part of a midbrain reticular formation.") AnnotationAssertion( ) AnnotationAssertion( "BAMS:MRN") AnnotationAssertion( "FMA:62443") AnnotationAssertion( "MBA:128") AnnotationAssertion(Annotation( "FMA:62443") "midbrain reticular formation nucleus") AnnotationAssertion(Annotation( "ABA:MRN") "midbrain reticular nucleus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BAMS:MRN") "mesencephalic reticular nucleus") AnnotationAssertion( "UBERON:0007415") AnnotationAssertion(rdfs:label "nucleus of midbrain reticular formation") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (cerebellar peduncle) AnnotationAssertion(Annotation( "MGI:csmith"^^xsd:string) Annotation( "MP:0009976") "Any of the three large paired bundles of nerve fibers that connect the cerebellum to the brain stem.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:cbp") AnnotationAssertion( "EMAPA:35213") AnnotationAssertion( "FMA:272298") AnnotationAssertion( "MA:0002742") AnnotationAssertion( "MBA:752") AnnotationAssertion( "NCIT:C88147") AnnotationAssertion(Annotation( "ncithesaurus:Cerebellar_Peduncle") "UMLS:C0228515") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "EMAPA:35213") "cerebellum peduncle") AnnotationAssertion( "UBERON:0007416") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "cerebellar peduncle") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (peduncle of neuraxis) AnnotationAssertion( "FMA:83860") AnnotationAssertion(Annotation( "FMA:83860") "neuraxis peduncle") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007417") AnnotationAssertion(rdfs:label "peduncle of neuraxis") SubClassOf( ) # Class: (neural decussation) AnnotationAssertion(Annotation( "NLX:144064") "Nerve fibers crossing the midline of the neuraxis relative to their point of origin, on a course to from one level of the nervous system to another. (CUMBO, Heimer, L. The Human Brain, 2nd ed., 1995, pg 6).") AnnotationAssertion( "chiasm") AnnotationAssertion( "chiasma") AnnotationAssertion( "decussation") AnnotationAssertion( "FMA:83858") AnnotationAssertion( "NCIT:C28351") AnnotationAssertion( "NLX:144064") AnnotationAssertion(Annotation( "FMA:83858") "decussation of neuraxis") AnnotationAssertion( "neuraxis chiasm") AnnotationAssertion( "neuraxis chiasma") AnnotationAssertion(Annotation( "FMA:83858") "neuraxis decussation") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007418") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "neural decussation") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (decussation of diencephalon) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A neural decussation that is part of a diencephalon.") AnnotationAssertion( "FMA:62446") AnnotationAssertion(Annotation( "FMA:62446") "diencephalon decussation") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007425") AnnotationAssertion(rdfs:label "decussation of diencephalon") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf(Annotation( "Obol") ObjectSomeValuesFrom( )) # Class: (stratum intermedium of tooth) AnnotationAssertion(Annotation( ) "The stratum intermedium in a developing tooth is a layer of two or three cells between the inner enamel epithelium and the newly forming cells of the stellate reticulum. It first appears during the early bell stage of tooth development, at around the 14th week of intrauterine life (in humans). The stratum intermedium has a notably high alkaline phosphatase activity. This layer, along with the inner enamel epithelium, is responsible for the tooth enamel formation. It is a part of the dental (enamel) organ.") AnnotationAssertion(Annotation( "BTO:0005009") "stratum intermedium") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0005009") AnnotationAssertion( "NCIT:C33628") AnnotationAssertion(Annotation( "ncithesaurus:Stratum_Intermedium") "UMLS:C1514987") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007440") AnnotationAssertion(rdfs:label "stratum intermedium of tooth") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "BTO"^^xsd:string) ObjectSomeValuesFrom( )) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (lumen of epithelial sac) AnnotationAssertion(Annotation( "AEO:JB"^^xsd:string) "The space within an epithelial sphere.") AnnotationAssertion( "EHDAA2:0003079") AnnotationAssertion( "AEO:0000079") AnnotationAssertion(Annotation( "AEO:0000079") "cavity of vesicle") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007473") AnnotationAssertion(rdfs:label "lumen of epithelial sac") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (matrix-based tissue) AnnotationAssertion(Annotation( "AEO:JB"^^xsd:string) "A tissue whose predominant feature is extracellular matrix which may or may not be highly hydrated or calcified.") AnnotationAssertion( "EHDAA2:0003081") AnnotationAssertion( "AEO:0000081") AnnotationAssertion( "EHDAA2:0003081") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007475") AnnotationAssertion(rdfs:label "matrix-based tissue") SubClassOf( ) # Class: (fluid-based anatomical entity) AnnotationAssertion(Annotation( "AEO:JB"^^xsd:string) "Fluid anatomical entity containing cells.") AnnotationAssertion( "EHDAA2:0003095") AnnotationAssertion( "AEO:0000095") AnnotationAssertion( "EHDAA2:0003095") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007486") AnnotationAssertion(rdfs:label "fluid-based anatomical entity") SubClassOf(Annotation( "AEO"^^xsd:string) ) # Class: (keratin-based acellular structure) AnnotationAssertion(Annotation( "AEO:JB"^^xsd:string) "Acellular anatomical structure whose predominant constituent is keratin.") AnnotationAssertion( "should all structures composed primarily of keratin be classified here? At what stage of cornification are keratin-filled cells no longer considered cells") AnnotationAssertion( "EHDAA2:0003099") AnnotationAssertion( "AEO:0000099") AnnotationAssertion( "EHDAA2:0003099") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "EHDAA2:0003099") "keratin-based structure") AnnotationAssertion( "UBERON:0007490") AnnotationAssertion(rdfs:label "keratin-based acellular structure") SubClassOf( ) # Class: (chitin-based acellular structure) AnnotationAssertion(Annotation( "AEO:JB"^^xsd:string) "Acellular anatomical structure whose predominant constituent is chitin.") AnnotationAssertion( "EHDAA2:0003100") AnnotationAssertion( "AEO:0000100") AnnotationAssertion( "EHDAA2:0003100") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007491") AnnotationAssertion(rdfs:label "chitin-based acellular structure") SubClassOf( ) # Class: (obsolete developing epithelial placode) AnnotationAssertion(Annotation( "AEO:0000218") Annotation( "JB:DEF") "OBSOLETE: A domain of columnar epithelium in an embryo that represents the early stage of the development of the epithelial component of a new anatomical structure.") AnnotationAssertion( "consider merging with ectodermal placode? In EHDAA2 this includes lens, nasal, otic epibranchial and trigeminal placodes") AnnotationAssertion( "UBERON:0005085") AnnotationAssertion( "EHDAA2:0003112") AnnotationAssertion( "AEO_RETIRED:0000112") AnnotationAssertion( "EHDAA2_RETIRED:0003112") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007497") AnnotationAssertion(rdfs:label "obsolete developing epithelial placode") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (epithelial sac) AnnotationAssertion(Annotation( "AEO:JB"^^xsd:string) Annotation( "UBERONREF:0000001") "An epithelial tube that is open at one end only.") AnnotationAssertion( "AEO:0000115") AnnotationAssertion( "EHDAA2:0003115") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007499") AnnotationAssertion(rdfs:label "epithelial sac") SubClassOf(Annotation( "AEO"^^xsd:string) ) SubClassOf( ) # Class: (epithelial tube open at both ends) AnnotationAssertion(Annotation( "AEO:JB"^^xsd:string) Annotation( "UBERONREF:0000001") "An epithelial tube open at both ends that allows fluid flow.") AnnotationAssertion( "AEO_RETIRED:0000116") AnnotationAssertion( "RETIRED_EHDAA2:0003116") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007500") AnnotationAssertion(rdfs:label "epithelial tube open at both ends") SubClassOf(Annotation( "AEO"^^xsd:string) ) # Class: (arborizing epithelial duct system) AnnotationAssertion(Annotation( "AEO:JB"^^xsd:string) Annotation( "UBERONREF:0000001") "A collection of connected epithelial tubes with a single portal.") AnnotationAssertion( "EHDAA2:0003117") AnnotationAssertion( "AEO:0000117") AnnotationAssertion( "EHDAA2:0003117") AnnotationAssertion(Annotation( "AEO:0000117") "arborising epithelial duct system") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007501") AnnotationAssertion(rdfs:label "arborizing epithelial duct system") SubClassOf(Annotation( "AEO"^^xsd:string) ) SubClassOf(Annotation( "AEO"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (epithelial plexus) AnnotationAssertion(Annotation( "AEO:JB"^^xsd:string) "A complex of interlinking epithelial tubules.") AnnotationAssertion( "EHDAA2:0003118") AnnotationAssertion( "AEO:0000118") AnnotationAssertion( "EHDAA2:0003118") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007502") AnnotationAssertion(rdfs:label "epithelial plexus") SubClassOf(Annotation( "AEO"^^xsd:string) ) SubClassOf(Annotation( "AEO"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (epithelial vesicle) AnnotationAssertion(Annotation( "AEO:JB"^^xsd:string) "A closed epithelium with a lumen.") AnnotationAssertion( "EHDAA2:0003119") AnnotationAssertion( "AEO:0000119") AnnotationAssertion( "EHDAA2:0003119") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007503") AnnotationAssertion(rdfs:label "epithelial vesicle") SubClassOf(Annotation( "AEO"^^xsd:string) ) # Class: (smooth muscle sphincter) AnnotationAssertion(Annotation( "AEO:JB"^^xsd:string) "A ring of smooth muscle cells whose contraction closes the opening of the ring.") AnnotationAssertion( ) AnnotationAssertion( "AEO:0000143") AnnotationAssertion( "EHDAA2:0003143") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007521") AnnotationAssertion(rdfs:label "smooth muscle sphincter") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (striated muscle sphincter) AnnotationAssertion(Annotation( "AEO:JB"^^xsd:string) "A ring of striated muscle cells whose contraction closes the opening of the ring.") AnnotationAssertion( "AEO:0000144") AnnotationAssertion( "EHDAA2:0003144") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007522") AnnotationAssertion(rdfs:label "striated muscle sphincter") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (dense mesenchyme tissue) AnnotationAssertion(Annotation( "AEO:JB"^^xsd:string) "Mesenchyme with little extracellular matrix.") AnnotationAssertion( "EHDAA2:0003146") AnnotationAssertion( "AEO:0000146") AnnotationAssertion( "EHDAA2:0003146") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007524") AnnotationAssertion(rdfs:label "dense mesenchyme tissue") SubClassOf(Annotation( "AEO"^^xsd:string) ) SubClassOf(Annotation( "AEO"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (loose mesenchyme tissue) AnnotationAssertion(Annotation( "AEO:JB"^^xsd:string) "Mesenchyme whose cells are embedded in obvious amounts of extracellular matrix.") AnnotationAssertion( "EHDAA2:0003151") AnnotationAssertion( "AEO:0000151") AnnotationAssertion( "EHDAA2:0003151") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007529") AnnotationAssertion(rdfs:label "loose mesenchyme tissue") SubClassOf(Annotation( "AEO"^^xsd:string) ) SubClassOf(Annotation( "AEO"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "AEO"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (migrating mesenchyme population) AnnotationAssertion(Annotation( "AEO:JB"^^xsd:string) "Mesenchymal cells that are migrating.") AnnotationAssertion( "this class will be an important part of the NC reorganization") AnnotationAssertion( "EHDAA2:0003152") AnnotationAssertion( "AEO:0000152") AnnotationAssertion( "EHDAA2:0003152") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007530") AnnotationAssertion(rdfs:label "migrating mesenchyme population") SubClassOf( ) # Class: (obsolete surface sense organ) AnnotationAssertion( "AEO:0000173") AnnotationAssertion( "EHDAA2:0003173") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007540") AnnotationAssertion(rdfs:comment "obsoleted due to incorrect logical definition. A new class with the same name may be created in the future.") AnnotationAssertion(rdfs:label "obsolete surface sense organ") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (regenerating anatomical structure) AnnotationAssertion(Annotation( ) "An anatomical structure that is undergoing regeneration.") AnnotationAssertion( "we define this in terms of active participation in regeneration, rather that capabilities. In this sense it is different from the AEO structure.") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0005147") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "A portion of tissue that is regrowing after damage or amputation.[TAO]") AnnotationAssertion( "EHDAA2:0003233") AnnotationAssertion( "AEO:0000200") AnnotationAssertion( "EHDAA2:0003233") AnnotationAssertion( "TAO:0005147") AnnotationAssertion( "XAO:0004059") AnnotationAssertion( "ZFA:0005147") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "ZFA:0005147") "regenerating tissue") AnnotationAssertion(Annotation( "ZFA:0005147") Annotation( ) "regenerating tissues") AnnotationAssertion( "regenerative tissue") AnnotationAssertion( "UBERON:0007567") AnnotationAssertion(rdfs:label "regenerating anatomical structure") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (migrating epithelium) AnnotationAssertion(Annotation( "AEO:JB"^^xsd:string) "An epithelium that extends its surface area by peripheral movement.") AnnotationAssertion( "EHDAA2:0003251") AnnotationAssertion( "AEO:0000206") AnnotationAssertion( "EHDAA2:0003251") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007573") AnnotationAssertion(rdfs:label "migrating epithelium") SubClassOf(Annotation( "AEO"^^xsd:string) ) # Class: (apical epidermal cap) AnnotationAssertion(Annotation( "Wikipedia"^^xsd:string) ) AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0005148") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "Part of the regeneration epithelium closest to the fin.[TAO]") AnnotationAssertion( "TAO:0005148") AnnotationAssertion( "ZFA:0005148") AnnotationAssertion(Annotation( "ZFA:0005148") Annotation( ) "apical epidermal caps") AnnotationAssertion(Annotation( ) "apical epithelial cap") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007574") AnnotationAssertion(rdfs:label "apical epidermal cap") SubClassOf(Annotation( "ZFA"^^xsd:string) ) SubClassOf(Annotation( "ZFA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (ciliated columnar oviduct epithelium) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A ciliated columnar epithelium that is part of a oviduct.") AnnotationAssertion(Annotation( "FMA"^^xsd:string) "in FMA, epithelium of uterine tube is a subclass of ciliated columnar epithelium. MA introduces subtypes: ciliated columnar and cuboidal. We map the FMA type according to its relationships, not its label") AnnotationAssertion( "FMA:62016") AnnotationAssertion( "MA:0001719") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:62016") "epithelium of uterine tube") AnnotationAssertion(Annotation( "FMA:62016") "uterine tube epithelium") AnnotationAssertion( "UBERON:0007589") AnnotationAssertion(rdfs:label "ciliated columnar oviduct epithelium") SubClassOf(Annotation( "MA"^^xsd:string) ) SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (cuboidal oviduct epithelium) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A cuboidal epithelium that is part of a oviduct.") AnnotationAssertion( "MA:0001720") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007590") AnnotationAssertion(rdfs:label "cuboidal oviduct epithelium") SubClassOf(Annotation( "MA"^^xsd:string) ) SubClassOf( ) # Class: (ciliated columnar epithelium) AnnotationAssertion(Annotation( "FMA:64798") "Simple columnar epithelium in which the luminal side of the cells bears cilia. Examples: epithelium of trachea, epithelium of uterine tube.[FMA].") AnnotationAssertion( "In humans, Ciliated columnar epithelial cells are found mainly in the tracheal and bronchial regions of the pulmonary system and also in the fallopian tubes of the female reproductive system") AnnotationAssertion( "Ciliated columnar epithelium in the pulmonary system is interspersed with goblet cells that secrete mucous to form a mucosal layer apical to the epithelial layer. The rowing-like action of epithelial cilia work in tandem with goblet cells to propel mucus away from the lungs, preventing particulate matter from causing infection[http://www.bio.davidson.edu/people/kabernd/berndcv/lab/epithelialinfoweb/ciliated%20columnar%20epithelium.html]") AnnotationAssertion( "FMA:64798") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007592") AnnotationAssertion(rdfs:label "ciliated columnar epithelium") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ) # Class: (ciliated epithelium) AnnotationAssertion(Annotation( ) "Epithelium bearing vibratile cilia on the free surface.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007601") AnnotationAssertion(rdfs:label "ciliated epithelium") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (stratified columnar epithelium) AnnotationAssertion(Annotation( ) "Stratified columnar epithelia is a rare type of epithelial tissue composed of column shaped cells arranged in multiple layers. Stratified columnar epithelia are found in the ocular conjunctiva of the eye, in parts of the pharynx and anus, the female's uterus, the male urethra and vas deferens. Also found in intralobular ducts in salivary glands.[WP].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:45564") AnnotationAssertion( "NCIT:C33620") AnnotationAssertion(Annotation( "ncithesaurus:Stratified_Columnar_Epithelium") "UMLS:C0836132") AnnotationAssertion(Annotation( "FMA:45564") "epithelium stratificatum columnare") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007602") AnnotationAssertion(rdfs:label "stratified columnar epithelium") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ) # Class: (stratified cuboidal epithelium) AnnotationAssertion(Annotation( ) "Stratified cuboidal epithelia is a rare type of epithelial tissue composed of cuboidally shaped cells arranged in multiple layers. They protect areas such as ducts of sweat glands, mammary glands, and salivary glands.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:63912") AnnotationAssertion( "NCIT:C33621") AnnotationAssertion(Annotation( "ncithesaurus:Stratified_Cuboidal_Epithelium") "UMLS:C0932055") AnnotationAssertion(Annotation( "FMA:63912") "epithelium stratificatum cuboideum") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007603") AnnotationAssertion(rdfs:label "stratified cuboidal epithelium") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/1/18/Gray940.png"^^xsd:anyURI) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ) # Class: (ciliated stratified columnar epithelium) AnnotationAssertion( "FMA:67521") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007606") AnnotationAssertion(rdfs:label "ciliated stratified columnar epithelium") SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (tibial artery) AnnotationAssertion(Annotation( "MESH:A07.231.114.895") "The anterior and posterior arteries created at the bifurcation of the popliteal artery. The anterior tibial artery begins at the lower border of the popliteus muscle and lies along the tibia at the distal part of the leg to surface superficially anterior to the ankle joint. Its branches are distributed throughout the leg, ankle, and pes. The posterior tibial artery begins at the lower border of the popliteus muscle, lies behind the tibia in the lower part of its course, and is found situated between the medial malleolus and the medial process of the calcaneal tuberosity. Its branches are distributed throughout the leg and foot.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:36530") AnnotationAssertion( "GAID:514") AnnotationAssertion( "MA:0002067") AnnotationAssertion( "MESH:D016909") AnnotationAssertion( "NCIT:C12824") AnnotationAssertion(Annotation( "ncithesaurus:Tibial_Artery") "UMLS:C0085427") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007610") AnnotationAssertion(rdfs:label "tibial artery") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (extensor digitorum communis) AnnotationAssertion(Annotation( ) Annotation( "BTO:0001343") "A muscle on the back of the forearm that extends the fingers and wrist.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0001343") AnnotationAssertion( "EMAPA:36191") AnnotationAssertion( "FMA:38500") AnnotationAssertion( "MA:0002293") AnnotationAssertion( "NCIT:C52916") AnnotationAssertion(Annotation( "ncithesaurus:Extensor_Digitorum_Communis") "UMLS:C1707982") AnnotationAssertion(Annotation( "FMA:38500") "extensor digitorum") AnnotationAssertion( "extensor digitorum communis muscle") AnnotationAssertion( "uberon") AnnotationAssertion( "extensor communis") AnnotationAssertion(Annotation( ) Annotation( ) "musculus extensor digitorum") AnnotationAssertion( "UBERON:0007612") AnnotationAssertion(rdfs:label "extensor digitorum communis") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/e/e9/Extensor_digitorum_muscle.png"^^xsd:anyURI) SubClassOf(Annotation( "Wikipedia"^^xsd:string) ) SubClassOf(Annotation( "extensor expansion of middle and distal phalanges of the 2nd 3rd 4th and 5th fingers") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (extensor digiti minimi muscle) AnnotationAssertion(Annotation( ) Annotation( ) "The extensor minimi digiti (extensor digiti quinti proprius) is a slender muscle of the forearm, placed on the ulnar side of the Extensor digitorum communis, with which it is generally connected. It arises from the common Extensor tendon by a thin tendinous slip, from the intermuscular septa between it and the adjacent muscles. Its tendon runs through a compartment of the dorsal carpal ligament behind the distal radio-ulnar joint, then divides into two as it crosses the manus, and finally joins the expansion of the Extensor digitorum communis tendon on the dorsum of the first phalanx of the little finger[WP].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:38503") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "extensor digiti minimi") AnnotationAssertion(Annotation( ) "extensor digiti minimi (hand)") AnnotationAssertion(Annotation( ) Annotation( ) "extensor digiti quinti proprius") AnnotationAssertion(Annotation( ) Annotation( ) "musculus extensor digiti minimi") AnnotationAssertion( "UBERON:0007614") AnnotationAssertion(rdfs:comment "The tendon of insertion is sometimes divided and gives a slip to the fourth digit. An ulnar slip has been observed to end on the base of the fifth metacarpal, thus exactly reproducing the arrangement of the serially homologous slip known as peroneus tertius in the leg. The muscle may be absent in rare cases, but fusion with extensor digitorum is frequent, in which case the tendon comes from the common extensor.") AnnotationAssertion(rdfs:label "extensor digiti minimi muscle") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/1/15/Gray424.png"^^xsd:anyURI) SubClassOf(Annotation( "Wikipedia"^^xsd:string) ) SubClassOf(Annotation( "the anterior portion of the lateral epicondyle of the humerus") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "at the extensor expansion located at the base of the proximal phalanx of digit V on the dorsal side") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (layer of synovial tissue) AnnotationAssertion(Annotation( ) Annotation( "BTO:0001338") "A thin, loose vascular connective tissue that makes up the membranes surrounding joints and the sheaths protecting tendons (particularly flexor tendons in the hands and feet) where they pass over bony prominences. Synovial tissue contains synovial cells, which secrete a viscous liquid called synovial fluid; this liquid contains protein and hyaluronic acid and serves as a lubricant and nutrient for the joint cartilage surfaces[BTO]. Synovial tissue can be found in tendons (tissues that connect muscle to bone), bursae (fluid-filled, cushioning sacs found in spaces between tendons, ligaments, and bones), and the cavity (hollow enclosed area) that separates the bones of a freely movable joint, such as the knee or elbow[BTO].") AnnotationAssertion( "BTO:0001338") AnnotationAssertion( "CALOHA:TS-0998") AnnotationAssertion( "FMA:66762") AnnotationAssertion(Annotation( "CALOHA:TS-0998") "synovium") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) "stratum synoviale") AnnotationAssertion(Annotation( "FMA:66762") "synovial layer") AnnotationAssertion(Annotation( "FMA:66762") "synovial membrane") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0001338") "synovial tissue") AnnotationAssertion( "UBERON:0007616") AnnotationAssertion(rdfs:label "layer of synovial tissue") SubClassOf( ) SubClassOf(Annotation( "BTO"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (synovial cavity of joint) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An anatomical cavity that surrounded_by a synovial joint.") AnnotationAssertion( "FMA:11356") AnnotationAssertion(Annotation( "FMA:11356") "articular cavity (synovial joint)") AnnotationAssertion(Annotation( "FMA:11356") "cavitas articularis (junctura synovialis)") AnnotationAssertion(Annotation( "FMA:11356") "cavity of synovial joint") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:11356") "joint cavity") AnnotationAssertion(Annotation( "FMA:11356") "synovial cavity") AnnotationAssertion( "UBERON:0007617") AnnotationAssertion(rdfs:label "synovial cavity of joint") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (synovial cavity of hip joint) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A synovial cavity of joint that is part of a hip joint.") AnnotationAssertion( "EMAPA:19021") AnnotationAssertion( "FMA:9701") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007618") AnnotationAssertion(rdfs:label "synovial cavity of hip joint") SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (limiting membrane of retina) AnnotationAssertion(Annotation( "MA"^^xsd:string) "MA does treat internal/external limiting membranes as layers - these are classified as laminae. We do not follow this convention. However, we do following MA is grouping these terms together") AnnotationAssertion( ) AnnotationAssertion( "MA:0001318") AnnotationAssertion(Annotation( ) Annotation( "MA:0001318") "retina lamina") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007619") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "limiting membrane of retina") SubClassOf(Annotation( "UBERON") ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pigment epithelium of eye) AnnotationAssertion(Annotation( "MP:0005200") "Epithelial layer of the retina, ciliary body, or iris composed of cells containing pigment granules.") AnnotationAssertion( "GAID:907") AnnotationAssertion( "MESH:D010857") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "MESH:A09.371.670") "eye pigment epithelium") AnnotationAssertion( "UBERON:0007625") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "pigment epithelium of eye") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (subparaventricular zone) AnnotationAssertion( ) AnnotationAssertion( "BAMS:SBPV") AnnotationAssertion( "BAMS:SPZ") AnnotationAssertion( "DHBA:266441555") AnnotationAssertion( "HBA:4574") AnnotationAssertion( "MA:0000842") AnnotationAssertion( "MBA:347") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007626") AnnotationAssertion(rdfs:label "subparaventricular zone") SubClassOf( ) SubClassOf(Annotation( "MA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (magnocellular nucleus of stria terminalis) AnnotationAssertion( ) AnnotationAssertion( "BAMS:MA") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37666") AnnotationAssertion( "MA:0000928") AnnotationAssertion( "MBA:521") AnnotationAssertion(Annotation( "MA:0000928") "magnocellular nucleus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007627") AnnotationAssertion(rdfs:comment "the magnocellular nucleus projects to virtually all known major parts of the brain network that controls pelvic functions, including micturition, defecation, and penile erection, as well as to brain networks controlling nutrient and body water homeostasis. This and other evidence suggests that the magnocellular nucleus is part of a corticostriatopallidal differentiation modulating and coordinating pelvic functions with the maintenance of nutrient and body water homeostasis[PMID:16304682]") AnnotationAssertion(rdfs:label "magnocellular nucleus of stria terminalis") SubClassOf( ) SubClassOf(Annotation( "MA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (lateral septal complex) AnnotationAssertion(Annotation( ) Annotation( "BTO:0003937") "The lateral septal area; largest nuclear mass in this region, plays a pivotal role in various physiological processes, such as aggression, emotion, thermoregulation, water and food intake and sexual behaviour.") AnnotationAssertion( ) AnnotationAssertion( "BAMS:LSX") AnnotationAssertion( "BTO:0003937") AnnotationAssertion( "EMAPA:35485") AnnotationAssertion( "MA:0000933") AnnotationAssertion( "MBA:275") AnnotationAssertion(Annotation( "BTO:0003937") "lateral septal area") AnnotationAssertion( "uberon") AnnotationAssertion( "lateral septum") AnnotationAssertion(Annotation( "BAMS:LSX") "lateral septum complex") AnnotationAssertion( "UBERON:0007628") AnnotationAssertion(rdfs:label "lateral septal complex") SubClassOf(Annotation( "MA"^^xsd:string) ) SubClassOf(Annotation( "ABA"^^xsd:string) ObjectSomeValuesFrom( )) DisjointClasses(Annotation( "lexical"^^xsd:string) ) # Class: (medial septal complex) AnnotationAssertion(Annotation( ) "A septal nuclear complex that consists of the nucleus of the diagonal bands and the septal medial nuclei.") AnnotationAssertion( ) AnnotationAssertion( "BAMS:MSC") AnnotationAssertion( "BAMS:MSX") AnnotationAssertion( "EMAPA:35552") AnnotationAssertion( "MA:0000934") AnnotationAssertion( "MBA:904") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BAMS:MSX") "medial septum complex") AnnotationAssertion( "UBERON:0007629") AnnotationAssertion(rdfs:label "medial septal complex") SubClassOf(Annotation( "MA"^^xsd:string) ) # Class: (septohippocampal nucleus) AnnotationAssertion(Annotation( "NLX:60880") "Part of septal nuclear complex. In the human, it refers to the most caudal of scattered clusters of neurons in the septum pellucidum that extend, on the underside of the corpus callosum, from the level of the medial septal nucleus to the CA fields ( Crosby-1962 ). In the rat it is associated with the lateral septal nucleus throughout its rostro-caudal course toward the CA fields ( Swanson-1998. Adapted from Brain Info.") AnnotationAssertion( ) AnnotationAssertion( "BAMS:SH") AnnotationAssertion( "BAMS:SHi") AnnotationAssertion( "DMBA:16204") AnnotationAssertion( "EMAPA:35768") AnnotationAssertion( "MA:0000939") AnnotationAssertion( "MBA:333") AnnotationAssertion( "NLX:60880") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007630") AnnotationAssertion(rdfs:label "septohippocampal nucleus") SubClassOf( ) SubClassOf(Annotation( "MA-modified"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (accessory olfactory bulb glomerular layer) AnnotationAssertion( ) AnnotationAssertion( "BAMS:AOBgl") AnnotationAssertion( "BAMS:GlA") AnnotationAssertion( "BAMS:gl") AnnotationAssertion( "DMBA:15967") AnnotationAssertion( "EMAPA:35108") AnnotationAssertion( "MA:0000967") AnnotationAssertion( "MBA:188") AnnotationAssertion(Annotation( "DMBA:AGlom") "AOB, glomerular layer") AnnotationAssertion(Annotation( "ABA:AOBgl") "accessory olfactory bulb, glomerular layer") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BAMS:GlA") "glomerular layer of the accessory olfactory bulb") AnnotationAssertion( "UBERON:0007631") AnnotationAssertion(rdfs:label "accessory olfactory bulb glomerular layer") SubClassOf( ) SubClassOf(Annotation( "ABA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (Barrington's nucleus) AnnotationAssertion( ) AnnotationAssertion( "BAMS:B") AnnotationAssertion( "DHBA:12506") AnnotationAssertion( "DMBA:16973") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37436") AnnotationAssertion( "MA:0001011") AnnotationAssertion( "MBA:280") AnnotationAssertion(Annotation( "DMBA:Bar") "nucleus of Barrington") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BAMS:B") "Barrington nucleus") AnnotationAssertion( "UBERON:0007632") AnnotationAssertion(rdfs:label "Barrington's nucleus") SubClassOf(Annotation( "MA"^^xsd:string) ) SubClassOf( ) SubClassOf(Annotation( "MA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (nucleus of trapezoid body) AnnotationAssertion(Annotation( ) Annotation( ) "A nucleus embedded within the fibers of the trapezoid body.") AnnotationAssertion(Annotation( "BIRNLEX:745") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "Tz") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:NTB") AnnotationAssertion( "BAMS:Tz") AnnotationAssertion( "BIRNLEX:745") AnnotationAssertion( "BM:NTB") AnnotationAssertion( "DHBA:12458") AnnotationAssertion( "EMAPA:35600") AnnotationAssertion( "FMA:84023") AnnotationAssertion( "HBA:9185") AnnotationAssertion( "MA:0001018") AnnotationAssertion( "MBA:642") AnnotationAssertion(Annotation( "BIRNLEX:745") "UMLS:C0228436") AnnotationAssertion(Annotation( "BIRNLEX:745") "UMLS:C1289449") AnnotationAssertion(Annotation( "BIRNLEX:745") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=576") AnnotationAssertion(Annotation( "BIRNLEX:745") "trapezoid nuclear complex") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:84023") "nuclei of trapezoid body") AnnotationAssertion(Annotation( "NeuroNames:576") Annotation( ) "nucleus corporis trapezoidei") AnnotationAssertion(Annotation( "BAMS:NTB") "nucleus of the trapezoid body") AnnotationAssertion(Annotation( "BAMS:Tz") "nucleus of the trapezoid body") AnnotationAssertion(Annotation( "NeuroNames:576") Annotation( ) "nucleus trapezoidalis") AnnotationAssertion(Annotation( "FMA:84023") "set of nuclei of trapezoid body") AnnotationAssertion(Annotation( "BIRNLEX:745") "trapezoid gray") AnnotationAssertion(Annotation( "BIRNLEX:745") "trapezoid nuclei") AnnotationAssertion( "UBERON:0007633") AnnotationAssertion(rdfs:label "nucleus of trapezoid body") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (parabrachial nucleus) AnnotationAssertion(Annotation( ) "A nucleus of the parabrachial area, which in the human brain is a horseshoe-shaped strip of gray matter comprising the Kölliker-Fuse nucleus, the lateral parabrachial nucleus and the medial parabrachial nucleus.") AnnotationAssertion(Annotation( "Butler, 1995") ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:PB") AnnotationAssertion( "BM:PB") AnnotationAssertion( "DHBA:12481") AnnotationAssertion( "DMBA:16844") AnnotationAssertion( "EMAPA:35657") AnnotationAssertion( "MA:0001019") AnnotationAssertion( "MBA:867") AnnotationAssertion( "NLX:23647") AnnotationAssertion( "uberon") AnnotationAssertion( "parabrachial area") AnnotationAssertion( "parabrachial complex") AnnotationAssertion( "parabrachial nuclei") AnnotationAssertion( "UBERON:0007634") AnnotationAssertion(rdfs:label "parabrachial nucleus") SubClassOf(Annotation( "MA"^^xsd:string) ) SubClassOf( ) SubClassOf(Annotation( "MA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (nucleus of medulla oblongata) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A neural nucleus that is part of a medulla oblongata.") AnnotationAssertion( ) AnnotationAssertion( "FMA:258772") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007635") AnnotationAssertion(rdfs:label "nucleus of medulla oblongata") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (hippocampus stratum lucidum) AnnotationAssertion(Annotation( "BIRNLEX:4108") "Layer of hippocampus area CA3 lying superficial to the pyramidal cell layer that contains mossy fiber axons projecting from the dentate gyrus. A slight thickening in this layer marks the border in some species between areas CA2 and CA3. dapted from Paxinos, G. The rat central nervous system, 2nd ed, Academic Press, San Diego, 1995, pg. 460).") AnnotationAssertion(Annotation( "BIRNLEX:4108") "stratum lucidum") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:SLu") AnnotationAssertion( "BIRNLEX:4108") AnnotationAssertion( "EMAPA:35411") AnnotationAssertion( "NCIT:C33629") AnnotationAssertion(Annotation( "BIRNLEX:4108") "OldNeuroNames:-975815906") AnnotationAssertion(Annotation( "ncithesaurus:Stratum_Lucidum") "UMLS:C0221922") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "stratum lucidum hippocampi") AnnotationAssertion(Annotation( "BAMS:SLu") "stratum lucidum hippocampus") AnnotationAssertion( "UBERON:0007637") AnnotationAssertion(rdfs:label "hippocampus stratum lucidum") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (hippocampus alveus) AnnotationAssertion(Annotation( "BIRNLEX:1510") "Regional part of fornix consisting of a thin layer of white matter on the surface of the hippocampal formation, bordering the wall of the lateral ventricle and composed of white, myelinated fibers. The alveus arises from cell bodies in the subiculum and hippocampus, and eventually merges with the fimbria of the hippocampus. The fimbria goes on to become the fornix (MM: 2006-10-26).") AnnotationAssertion( "TODO - check xref: NCIT:C32058 ! Alveus") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:Alv") AnnotationAssertion( "BAMS:alv") AnnotationAssertion( "BIRNLEX:1510") AnnotationAssertion( "DHBA:10570") AnnotationAssertion( "FMA:83867") AnnotationAssertion( "HBA:9234") AnnotationAssertion( "MBA:466") AnnotationAssertion( "NCIT:C32058") AnnotationAssertion(Annotation( "BIRNLEX:1510") "UMLS:C0228247") AnnotationAssertion(Annotation( "ncithesaurus:Alveus") "UMLS:C0228247") AnnotationAssertion(Annotation( "BIRNLEX:1510") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=186") AnnotationAssertion(Annotation( "BIRNLEX:1510") "alveus") AnnotationAssertion(Annotation( "FMA:83867") "alveus of hippocampus") AnnotationAssertion(Annotation( "FMA:83867") "neuraxis alveus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BAMS:alv") "CA2 alveus") AnnotationAssertion(Annotation( "NeuroNames:186") Annotation( ) "alveus hippocampi") AnnotationAssertion(Annotation( "BAMS:alv") "alveus of fornix") AnnotationAssertion(Annotation( "BAMS:alv") "alveus of the hippocampus") AnnotationAssertion( "UBERON:0007639") AnnotationAssertion(rdfs:label "hippocampus alveus") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "NIFSTD"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (hippocampus stratum lacunosum moleculare) AnnotationAssertion(Annotation( "BIRNLEX:1359") "Layer of the hippocampus lying just superficial to the stratum radiatum and bounded by the pial surface of the hippocampus. The fibers of the perforant pathway fibers from entorhinal cortex and several other brain areas terminate in this layer. Adapted from Paxinos, G. The rat central nervous system, 2nd ed, Academic Press, San Diego, 1995, pg. 460).") AnnotationAssertion( "Here the perforant path fibers form synapses onto the distal, apical dendrites of pyramidal cells.[WP]") AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:1359") AnnotationAssertion( "FMA:83149") AnnotationAssertion(Annotation( ) "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=2456") AnnotationAssertion(Annotation( "FMA:83149") "lacunar-molecular layer of hippocampus") AnnotationAssertion(Annotation( "FMA:83149") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "stratum hippocampi moleculare et substratum lacunosum") AnnotationAssertion(Annotation( ) Annotation( "BIRNLEX:1359") "stratum lacunosum moleculare") AnnotationAssertion(Annotation( "ABA:ABA") "stratum lacunosum-moleculare") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007640") AnnotationAssertion(rdfs:label "hippocampus stratum lacunosum moleculare") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (trigeminal nuclear complex) AnnotationAssertion(Annotation( ) "The sensory trigeminal nerve nuclei are the largest of the cranial nerve nuclei, and extend through the whole of the midbrain, pons and medulla. There is also a distinct trigeminal motor nucleus that is medial to the chief sensory nucleus[WP].") AnnotationAssertion(Annotation( "MA"^^xsd:string) "in MA and FMA this is part of the pons / pontime tegmentum. We weaken this to overlaps to avoid inconsistency. In NIF this is a composite structure spanning multiple regions, which is more appropriate.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:4096") AnnotationAssertion( "BM:V") AnnotationAssertion( "CALOHA:TS-2077") AnnotationAssertion( "DHBA:266441713") AnnotationAssertion( "FMA:71248") AnnotationAssertion( "HBA:9203") AnnotationAssertion(Annotation( "BIRNLEX:4096") "UMLS:C0040999") AnnotationAssertion(Annotation( "FMA:71248") "trigeminal nuclei") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "nuclei trigemini") AnnotationAssertion( "UBERON:0007641") AnnotationAssertion(rdfs:label "trigeminal nuclear complex") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/3/30/Gray696.png"^^xsd:anyURI) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) SubClassOf( ObjectSomeValuesFrom( )) # Class: (ligamentum arteriosum) AnnotationAssertion(Annotation( ) "A small ligament attached to the superior surface of the pulmonary trunk and the inferior surface of the aortic arch. It is a nonfunctional vestige of the ductus arteriosus, and is formed within three weeks of birth. The ligamentum arteriosum is closely related to the left recurrent laryngeal nerve, a branch of the left vagus nerve. After splitting from the left vagus nerve, the left recurrent laryngeal loops around the aortic arch posterior to the ligamentum arteriosum, after which it ascends to the larynx[WP].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:13421") AnnotationAssertion(Annotation( "FMA:13421") "Botallo's duct") AnnotationAssertion(Annotation( "FMA:13421") "Botallo's ligament") AnnotationAssertion(Annotation( "FMA:13421") "Harvey's ligament") AnnotationAssertion(Annotation( "FMA:13421") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "ligamentum arteriosum (ductus arteriosus)") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "arterial ligament") AnnotationAssertion( "UBERON:0007642") AnnotationAssertion(rdfs:label "ligamentum arteriosum") AnnotationAssertion(rdfs:seeAlso ) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (node of ligamentum arteriosum) AnnotationAssertion(Annotation( ) "An inconstant lymph node of the anterior mediastinal group located adjacent to the ligamentum arteriosum.") AnnotationAssertion( "FMA:74033") AnnotationAssertion(Annotation( "FMA:74033") "Botallo's node") AnnotationAssertion(Annotation( "FMA:74033") "ligamentum arteriosum node") AnnotationAssertion(Annotation( ) "lymph node of ligamentum arteriosum") AnnotationAssertion(Annotation( ) "nodus ligamenti arteriosi") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007643") AnnotationAssertion(rdfs:label "node of ligamentum arteriosum") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (thoracic lymph node) AnnotationAssertion(Annotation( ) Annotation( "OBOL:automatic"^^xsd:string) "A lymph node that is part of a thorax. Includes lymph nodes of the lungs and mediastinal lymph nodes.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:12772") AnnotationAssertion( "NCIT:C33769") AnnotationAssertion(Annotation( "ncithesaurus:Thoracic_Lymph_Node") "UMLS:C0229745") AnnotationAssertion(Annotation( "FMA:12772") "lymph node of thorax") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:12772") "deep thoracic lymph node") AnnotationAssertion( "UBERON:0007644") AnnotationAssertion(rdfs:label "thoracic lymph node") SubClassOf( ) SubClassOf( ) # Class: (future meninx) AnnotationAssertion(Annotation( ) "A developing mesenchymal capsule that covers the developing brain and spinal cord and is the precursor of the meningeal cluster. In mammals this gives rise to the arachnoid mater, pia mater and dura mater. In cyclostomes and fishes, the future meninx gives rise to a single meningeal layer, the primitive meninx.") AnnotationAssertion( "decide whether to treat the endo and ecto meninx as subtypes or parts of the future meninx") AnnotationAssertion(Annotation( "MP:0009726") "the outermost mesenchymal covering of the developing brain and spinal cord that is composed of tough fibrous connective tissue from which the arachnoid mater, pia mater and dura mater are formed[MP:0009726]d") AnnotationAssertion( "UBERON:0004065") AnnotationAssertion( "EHDAA2:0004453") AnnotationAssertion(Annotation( "EHDAA2:0004453") "primary meninx") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "MP:0009726") "meninx primitiva") AnnotationAssertion( "primitive meninx") AnnotationAssertion( "primordial meninx") AnnotationAssertion( "UBERON:0007645") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "future meninx") SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "ISBN:0073040584"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (endomeninx) AnnotationAssertion(Annotation( "ISBN:9781607950325") "The innermost layer of the mesenchymal capsule that surrounds the developing brain, primarily of neural crest origin. The endomeninx forms the leptomeninx.") AnnotationAssertion( "future leptomeninges") AnnotationAssertion( "future leptomeninx") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007646") AnnotationAssertion(rdfs:label "endomeninx") SubClassOf( ) SubClassOf(Annotation( "ISBN:9781607950325") ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (ectomeninx) AnnotationAssertion(Annotation( "ISBN:9781607950325") "The outermost layer of the mesenchymal capsule that surrounds the developing brain, of mixed paraxial mesoderm and neural crest origin. The ectomeninx forms the dura mater (both inner layer and outer chondrogenic layer).") AnnotationAssertion( "UBERON:0010115") AnnotationAssertion( "EHDAA2:0004317") AnnotationAssertion(Annotation( "EHDAA2:0004317") "future dura mater") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007647") AnnotationAssertion(rdfs:label "ectomeninx") SubClassOf( ) SubClassOf(Annotation( "ISBN:9781607950325") ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (esophagogastric junction) AnnotationAssertion(Annotation( ) "The junction between the esophagus and the stomach epithelium.") AnnotationAssertion( "compare with gastroesophageal sphincter") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0004364") AnnotationAssertion( "FMA:9434") AnnotationAssertion( "GAID:292") AnnotationAssertion( "MESH:A03.365.414") AnnotationAssertion( "NCIT:C32668") AnnotationAssertion(Annotation( "ncithesaurus:Gastroesophageal_Junction") "UMLS:C0014871") AnnotationAssertion(Annotation( "FMA:9434") "cardioesophageal junction") AnnotationAssertion(Annotation( "FMA:9434") "gastroesophageal junction") AnnotationAssertion( "uberon") AnnotationAssertion( "GEJ") AnnotationAssertion(Annotation( "MESH:A03.365.414") "esophageal sphincter") AnnotationAssertion(Annotation( "MESH:A03.365.414") "esophagogastric junction") AnnotationAssertion( "squamocolumnar junction between esophagus and stomach") AnnotationAssertion( "UBERON:0007650") AnnotationAssertion(rdfs:label "esophagogastric junction") SubClassOf( ) SubClassOf(Annotation( "MESH"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "tFD") ObjectSomeValuesFrom( )) # Class: (anatomical junction) AnnotationAssertion(Annotation( ) "An anatomical structure that connects two structures.") AnnotationAssertion( "junction") AnnotationAssertion( ) AnnotationAssertion( "FMA:5898") AnnotationAssertion( "anatomical junction") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007651") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "anatomical junction") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ObjectMinCardinality(2 )) # Class: (esophageal sphincter) AnnotationAssertion(Annotation( ) "A sphincter that is part of an esophagus.") AnnotationAssertion( "check for specific subtypes across species. Note mammals have upper and lower, but lower is really part of cardia and thus is not classified under here") AnnotationAssertion( ) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007652") AnnotationAssertion(rdfs:label "esophageal sphincter") SubClassOf( ) SubClassOf( ) # Class: (capillary loop nephron) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Developing nephron where the developing glomerular capsule has been invaded by a glomerular capillary loop called the glomerular tuft.") AnnotationAssertion( "TODO") AnnotationAssertion( "EMAPA:28506") AnnotationAssertion( "ZFA:0005590") AnnotationAssertion(Annotation( "EMAPA:28506") "developing capillary loop stage nephron") AnnotationAssertion(Annotation( ) "stage III nephron") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007653") AnnotationAssertion(rdfs:label "capillary loop nephron") SubClassOf(Annotation( "cjm"^^xsd:string) ) SubClassOf(Annotation( "ZFA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (maturing nephron) AnnotationAssertion( "TODO") AnnotationAssertion( "EMAPA:28485") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "EMAPA:28485") "stage IV nephron") AnnotationAssertion( "UBERON:0007654") AnnotationAssertion(rdfs:label "maturing nephron") SubClassOf(Annotation( "cjm"^^xsd:string) ) SubClassOf(Annotation( "EMAPA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lateral recess of fourth ventricle) AnnotationAssertion(Annotation( ) "The lateral recess is a projection of the fourth ventricle which extends into the inferior cerebellar peduncle of the brainstem. The lateral aperture, an opening in each extremity of the lateral recess, provides a conduit for cerebrospinal fluid to flow from the brain's ventricular system into the subarachnoid space.") AnnotationAssertion(Annotation( "EMAPA:17257") Annotation( "MBA:153") "lateral recess") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:LR4V") AnnotationAssertion( "BAMS:V4r") AnnotationAssertion( "DHBA:12810") AnnotationAssertion( "EMAPA:17257") AnnotationAssertion( "FMA:78470") AnnotationAssertion( "MBA:153") AnnotationAssertion(Annotation( "FMA:78470") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "recessus lateralis (ventriculi quarti)") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BAMS:V4r") "fourth ventricle lateral recess") AnnotationAssertion(Annotation( "BAMS:LR4V") "lateral recess of the 4th ventricle") AnnotationAssertion(Annotation( ) Annotation( ) "recessus lateralis ventriculi quarti") AnnotationAssertion( "UBERON:0007656") AnnotationAssertion(rdfs:label "lateral recess of fourth ventricle") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/3/36/Gray768.png"^^xsd:anyURI) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf(Annotation( "EMAPA"^^xsd:string) ObjectSomeValuesFrom( )) DisjointClasses( ) # Class: (anular ligament of radius) AnnotationAssertion(Annotation( ) "The anular ligament (orbicular ligament) is a strong band of fibers, which encircles the head of the radius (bone), and retains it in contact with the radial notch of the ulna.") AnnotationAssertion(Annotation( "EMAPA:19322") "anular ligament") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:19322") AnnotationAssertion( "FMA:38872") AnnotationAssertion(Annotation( "FMA:38872") "annular ligament of radius") AnnotationAssertion(Annotation( "FMA:38872") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "ligamentum anulare radii") AnnotationAssertion(Annotation( "FMA:38872") "orbicular ligament of radius") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007657") AnnotationAssertion(rdfs:label "anular ligament of radius") SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (intersomitic vein) AnnotationAssertion(Annotation( "MGI:anna"^^xsd:string) "The vein that sprouts from the posterior cardinal vein, growing dorsally between the somites, and then joining, and draining the dorsal longitudinal anastomosing vessel.") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0001057") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "Primary intersegmental vessels that are contacted by secondary angiogenic sprouts from the posterior cardinal vein and take on the characteristics of veins. These eventually link with other secondary sprouts from the posterior cardinal vein to form the parachordal vessel. Isogai et al. 2003.[TAO]") AnnotationAssertion(Annotation( "ZFA:0001057") "ISV") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:26056") AnnotationAssertion( "TAO:0001057") AnnotationAssertion( "ZFA:0001057") AnnotationAssertion(Annotation( "ZFA:0001057") "intersegmental vein") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "EMAPA:26056") "segmental vein") AnnotationAssertion( "UBERON:0007679") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "intersomitic vein") SubClassOf( ) SubClassOf( ) # Class: (facial neural crest) AnnotationAssertion(Annotation( "ZFA:0000875") "Cranial neural crest that is part of the facial region.") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001209") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0030223693 Liem KF, Bemis WE, Walker WF, Grande L, Functional Anatomy of the Vertebrates: An Evolutionary Perspective (2001) p.43") "We conclude this section by listing some of the many synapomorphies of craniates, including (1) the neural crest (...).[well established][VHOG]") AnnotationAssertion( "EMAPA:16311") AnnotationAssertion( "TAO:0000875") AnnotationAssertion( "VHOG:0001209") AnnotationAssertion( "ZFA:0000875") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007681") AnnotationAssertion(rdfs:label "facial neural crest") SubClassOf(Annotation( "ZFA"^^xsd:string) ) SubClassOf( ) SubClassOf(Annotation( "EMAPA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (lateral mesenchyme derived from mesoderm) AnnotationAssertion( "EFO:0003590") AnnotationAssertion( "EMAPA:16409") AnnotationAssertion( "TAO:0000905") AnnotationAssertion( "ZFA:0000905") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007683") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "lateral mesenchyme derived from mesoderm") SubClassOf(Annotation( "ZFA"^^xsd:string) ) # Class: (uriniferous tubule) AnnotationAssertion(Annotation( "ISBN:0073040584"^^xsd:string) "Functional unit of the kidney that forms urine, consisting of two parts, the nephron and the collecting tubule.") AnnotationAssertion( "FMA:17691") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007684") AnnotationAssertion(rdfs:label "uriniferous tubule") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (region of nephron tubule) AnnotationAssertion(Annotation( "MA"^^xsd:string) "consider moving MA:0000377 renal tubule here, as it includes the various segments (proximal etc) as subclasses, not parts") AnnotationAssertion( "FMA:17692") AnnotationAssertion(Annotation( "FMA:17692") "renal tubule region") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:17692") "region of renal tubule") AnnotationAssertion( "UBERON:0007685") AnnotationAssertion(rdfs:label "region of nephron tubule") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete Hatschek's pit/nephridium) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007686") AnnotationAssertion(rdfs:label "obsolete Hatschek's pit/nephridium") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (kidney field) AnnotationAssertion(Annotation( ) Annotation( "GO:0072004") Annotation( "GOC:mtg_kidney_jan10") "Region of the embryo into the area in which the kidney rudiment will develop.") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "GOC:mtg_kidney_jan10") "kidney anlage") AnnotationAssertion( "UBERON:0007687") AnnotationAssertion(rdfs:label "kidney field") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (anlage) AnnotationAssertion(Annotation( ) Annotation( "FBbt:00005426") Annotation( "JB:DEF") "Anlagen are populations of contiguous cells, typically arranged in one plane, that are morphologically indistinct, but that already correspond in extent to a later organ/tissue.") AnnotationAssertion( "field") AnnotationAssertion( ) AnnotationAssertion( "AEO:0000170") AnnotationAssertion( "EFO:0001649") AnnotationAssertion( "EHDAA2:0003170") AnnotationAssertion( "FBbt:00005426") AnnotationAssertion( "developmental field") AnnotationAssertion( "uberon") AnnotationAssertion( "future organ") AnnotationAssertion( "organ field") AnnotationAssertion( "UBERON:0007688") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "anlage") SubClassOf(Annotation( "FBbt") ) SubClassOf(Annotation( "AEO"^^xsd:string) Annotation( "FBbt") ) # Class: (thyroid diverticulum) AnnotationAssertion(Annotation( ) Annotation( "MP:0004662") "Endodermal bud derived from the endodermal epithelium of the embryonic pharyngeal floor[MP]. The thyroid diverticulum is the embryological structure from which thyroid follicular cells derive. It grows from the floor of the pharnyx[WP].") AnnotationAssertion( ) AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "diverticulum thyroideum") AnnotationAssertion(Annotation( ) Annotation( ) "saccus thyroideus") AnnotationAssertion( "UBERON:0007689") AnnotationAssertion(rdfs:label "thyroid diverticulum") SubClassOf( ) SubClassOf(Annotation( "VHOG"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (early pharyngeal endoderm) AnnotationAssertion( "EFO:0003626") AnnotationAssertion( "EHDAA2:0001457") AnnotationAssertion( "EHDAA:962") AnnotationAssertion( "EMAPA:32754") AnnotationAssertion( "FMA:293087") AnnotationAssertion( "TAO:0001104") AnnotationAssertion( "ZFA:0001104") AnnotationAssertion(Annotation( "EHDAA2:0001457") "early pharyngeal arch endoderm") AnnotationAssertion( "uberon") AnnotationAssertion( "pharyngeal arch endoderm") AnnotationAssertion(Annotation( "ZFA:0001104") "pharyngeal endoderm") AnnotationAssertion(Annotation( "EHDAA2:0001456") "pharyngeal region endoderm") AnnotationAssertion( "UBERON:0007690") AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "relation conflict: ZFA vs EHDAA2. Note EHDAA2 term renamed to 'early PA endoderm'") AnnotationAssertion(rdfs:label "early pharyngeal endoderm") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "cjm"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (gustatory pore) AnnotationAssertion(Annotation( ) "The minute opening of a taste bud on the surface of the oral mucosa through which the gustatory hairs of the specialised neuroepithelial gustatory cells project.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:63589") AnnotationAssertion( "NCIT:C33738") AnnotationAssertion(Annotation( "ncithesaurus:Taste_Pore") "UMLS:C0226971") AnnotationAssertion(Annotation( ) "porus gustatorius") AnnotationAssertion(Annotation( "FMA:63589") "taste pore") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007691") AnnotationAssertion(rdfs:label "gustatory pore") AnnotationAssertion( "Taste:bud.svg"^^xsd:anyURI) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (nucleus of thalamus) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A nucleus of brain that is part of a thalamus.") AnnotationAssertion( "TODO - consider splitting nucleus and complex") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0002452") AnnotationAssertion( "EMAPA:35859") AnnotationAssertion( "FMA:256693") AnnotationAssertion( "MA:0002992") AnnotationAssertion(Annotation( "MA:0002992") "thalamic nucleus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:256693") "nuclear complex of thalamus") AnnotationAssertion( "UBERON:0007692") AnnotationAssertion(rdfs:label "nucleus of thalamus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (caroticotympanic artery) AnnotationAssertion(Annotation( ) "The caroticotympanic branch (tympanic branch) is small; it enters the tympanic cavity through a minute foramen in the carotid canal, and anastomoses with the anterior tympanic branch of the internal maxillary, and with the stylomastoid artery.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:49828") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "arteriae caroticotympanicae") AnnotationAssertion(Annotation( ) "caroticotympanic branch") AnnotationAssertion(Annotation( ) Annotation( ) "ramus caroticotympanicus") AnnotationAssertion( "UBERON:0007693") AnnotationAssertion(rdfs:label "caroticotympanic artery") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (tract of spinal cord) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An axon tract that is part of a spinal cord.") AnnotationAssertion( ) AnnotationAssertion( "FMA:75683") AnnotationAssertion( "NCIT:C12995") AnnotationAssertion(Annotation( "ncithesaurus:Spinal_Cord_Tract") "UMLS:C1519456") AnnotationAssertion(Annotation( "FMA:75683") "spinal cord tract") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007699") AnnotationAssertion(rdfs:label "tract of spinal cord") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "cjm"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (tract of brain) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An axon tract that is part of a brain.") AnnotationAssertion( "the NIFSTD class 'nerve tract' is classified under 'regional part of brain', so it may seem like it belongs here, but actually includes spinal cord tracts") AnnotationAssertion( "FMA:83848") AnnotationAssertion(Annotation( "FMA:83848") "brain tract") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "DMBA:tracts") "landmark tracts") AnnotationAssertion( "UBERON:0007702") AnnotationAssertion(rdfs:label "tract of brain") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "cjm"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (spinothalamic tract) AnnotationAssertion(Annotation( "NLXANAT:1010017") "A tract that originates from neurons in the spinal central gray and projects to various somatosensory nuclei of the thalamus. It is formed in the medulla by merger of the anterior spinothalamic tract and lateral spinothalamic tract (adapted from Braininfo.org).") AnnotationAssertion(Annotation( "GO:0021963") "a long process of a CNS neuron, that carries efferent (outgoing) action potentials from the cell body in the spinal cord towards target cells in the thalamus. This axonal process is a member of those that make up the spinothalamic tract, one of the major routes of nociceptive signaling[GO][GO:0021963].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:spth") AnnotationAssertion( "BAMS:stt") AnnotationAssertion( "DHBA:12789") AnnotationAssertion( "MBA:871") AnnotationAssertion( "NLXANAT:1010017") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007703") AnnotationAssertion(rdfs:label "spinothalamic tract") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/b/b2/Spinal_cord_tracts_-_English.svg"^^xsd:anyURI) SubClassOf( ) # Class: (superior cerebellar peduncle of midbrain) AnnotationAssertion(Annotation( "BIRNLEX:1162") "Regional part of superior cerebellar peduncle, located in the midbrain, consisting of a large bundle of fibers largely projecting from the deep cerebellar nuclei to the midbrain and thalamus. It is continuous with the superior cerebellar peduncle of the pons. (MM).") AnnotationAssertion(Annotation( "BIRNLEX:1162") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "SCPMB") AnnotationAssertion( ) AnnotationAssertion( "BAMS:scpmb") AnnotationAssertion( "BIRNLEX:1162") AnnotationAssertion(Annotation( "BIRNLEX:1162") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=820") AnnotationAssertion(Annotation( "BIRNLEX:1162") "SCPMB") AnnotationAssertion(Annotation( "BIRNLEX:1162") "superior cerebellar peduncle of midbrain") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:820") Annotation( ) "pedunculus cerebellaris superior (mesencephalon)") AnnotationAssertion(Annotation( "NeuroNames:820") "superior cerebellar peduncle of the midbrain") AnnotationAssertion( "UBERON:0007707") AnnotationAssertion(rdfs:label "superior cerebellar peduncle of midbrain") SubClassOf( ) SubClassOf(Annotation( "NIF"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (superior cerebellar peduncle of pons) AnnotationAssertion(Annotation( "FMA"^^xsd:string) "FMA:72495 most likely denotes this class rather than the more generic parent, due to the part of relationship to pontine tegmentum.") AnnotationAssertion(Annotation( "BIRNLEX:1726") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "SCPP") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:scpp") AnnotationAssertion( "BIRNLEX:1726") AnnotationAssertion( "FMA:72495") AnnotationAssertion(Annotation( "BIRNLEX:1726") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=833") AnnotationAssertion(Annotation( "BIRNLEX:1726") "SCPP") AnnotationAssertion(Annotation( "BIRNLEX:1726") "superior cerebellar peduncle of pons") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:833") Annotation( ) "pedunculus cerebellaris superior (pontis)") AnnotationAssertion(Annotation( "NeuroNames:833") "superior cerebellar peduncle of the pons") AnnotationAssertion( "UBERON:0007709") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "superior cerebellar peduncle of pons") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (intermediate nucleus of lateral lemniscus) AnnotationAssertion( "TODO - check") AnnotationAssertion( ) AnnotationAssertion( "BAMS:ILL") AnnotationAssertion( "BAMS:NLLh") AnnotationAssertion( "BAMS:Nllh") AnnotationAssertion( "DHBA:12456") AnnotationAssertion( "FMA:77485") AnnotationAssertion( "HBA:265504888") AnnotationAssertion( "MBA:90") AnnotationAssertion(Annotation( "ABA:NLLh") "nucleus of the lateral lemniscus, horizontal part") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BAMS:ILL") "intermediate nucleus of the lateral lemniscus") AnnotationAssertion(Annotation( "BAMS:NLLh") Annotation( "BAMS:Nllh") "nucleus of the lateral lemniscus horizontal part") AnnotationAssertion( "UBERON:0007710") AnnotationAssertion(rdfs:label "intermediate nucleus of lateral lemniscus") SubClassOf( ) # Class: (sixth cervical dorsal root ganglion) AnnotationAssertion( "BIRNLEX:2608") AnnotationAssertion( "EMAPA:25159") AnnotationAssertion( "FMA:6319") AnnotationAssertion(Annotation( "EMAPA:25159") "C6 dorsal root ganglion") AnnotationAssertion(Annotation( "FMA:6319") "sixth cervical dorsal root ganglia") AnnotationAssertion(Annotation( "BIRNLEX:2608") "sixth cervical dorsal root ganglion") AnnotationAssertion(Annotation( "FMA:6319") "sixth cervical spinal ganglion") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007711") AnnotationAssertion(rdfs:label "sixth cervical dorsal root ganglion") SubClassOf(Annotation( "NIFSTD"^^xsd:string) ) # Class: (fourth thoracic spinal ganglion) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:2614") AnnotationAssertion( "EMAPA:25177") AnnotationAssertion( "FMA:6324") AnnotationAssertion(Annotation( "BIRNLEX:2614") "UMLS:C0501702") AnnotationAssertion(Annotation( ) Annotation( "BIRNLEX:2614") Annotation( "FMA:6324") "fourth thoracic dorsal root ganglion") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007712") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "fourth thoracic spinal ganglion") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (fourth sacral spinal ganglion) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:2631") AnnotationAssertion( "EMAPA:25173") AnnotationAssertion( "FMA:6345") AnnotationAssertion(Annotation( "BIRNLEX:2631") "UMLS:C0501723") AnnotationAssertion(Annotation( "BIRNLEX:2631") "forth sacral dorsal root ganglion") AnnotationAssertion(Annotation( ) "fourth sacral dorsal root ganglion") AnnotationAssertion(Annotation( "FMA:6345") "fourth sacral dorsal root ganglion") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007713") AnnotationAssertion(rdfs:label "fourth sacral spinal ganglion") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (cervical subsegment of spinal cord) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:1688") AnnotationAssertion( "FMA:256653") AnnotationAssertion(Annotation( "BIRNLEX:1688") "segment part of cervical spinal cord") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007714") AnnotationAssertion(rdfs:label "cervical subsegment of spinal cord") SubClassOf(Annotation( "FMA"^^xsd:string) Annotation( "NIF"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (thoracic subsegment of spinal cord) AnnotationAssertion( "BIRNLEX:892") AnnotationAssertion( "FMA:256655") AnnotationAssertion(Annotation( "BIRNLEX:892") "segment part of thoracic spinal cord") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007715") AnnotationAssertion(rdfs:label "thoracic subsegment of spinal cord") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lumbar subsegment of spinal cord) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:1652") AnnotationAssertion( "FMA:256657") AnnotationAssertion(Annotation( "BIRNLEX:1652") "segment part of lumbar spinal cord") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007716") AnnotationAssertion(rdfs:label "lumbar subsegment of spinal cord") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses(Annotation( "NIFSTD"^^xsd:string) ) DisjointClasses(Annotation( "NIFSTD"^^xsd:string) ) # Class: (sacral subsegment of spinal cord) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:1512") AnnotationAssertion( "FMA:256659") AnnotationAssertion(Annotation( "BIRNLEX:1512") "segment part of sacral spinal cord") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007717") AnnotationAssertion(rdfs:label "sacral subsegment of spinal cord") SubClassOf(Annotation( "FMA"^^xsd:string) Annotation( "NIF"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses(Annotation( "NIFSTD"^^xsd:string) ) # Class: (principal artery to limb) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007718") AnnotationAssertion(rdfs:label "principal artery to limb") SubClassOf(Annotation( "MA"^^xsd:string) ) # Class: (interphalangeal joint of pes) AnnotationAssertion(Annotation( ) "The interphalangeal articulations of the foot (articulations of the phalanges) are ginglymoid joints, and each has a plantar and two collateral ligaments. The arrangement of these ligaments is similar to that in the metatarsophalangeal articulations: the Extensor tendons supply the places of dorsal ligaments.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:36337") AnnotationAssertion( "FMA:35225") AnnotationAssertion( "MESH:D014033") AnnotationAssertion( "NCIT:C32867") AnnotationAssertion( "NCIT:C33789") AnnotationAssertion(Annotation( "ncithesaurus:Interphalangeal_Joint_of_the_Foot") "UMLS:C0040356") AnnotationAssertion(Annotation( "MESH:A02.835.583.378.900") "foot interphalangeal joint") AnnotationAssertion(Annotation( "EMAPA:36337") "hindlimb digit inter-phalangeal joint") AnnotationAssertion(Annotation( "FMA:35225") "interphalangeal joint of foot") AnnotationAssertion(Annotation( "FMA:35225") Annotation( "NCBITaxon:9606"^^xsd:string) Annotation( ) "interphalangeal joint of toe") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "MESH:A02.835.583.378.900") "toe joint") AnnotationAssertion( "UBERON:0007721") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "interphalangeal joint of pes") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectIntersectionOf(ObjectMinCardinality(2 ) ObjectMaxCardinality(2 ))) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "two in series") ObjectSomeValuesFrom( )) # Class: (interphalangeal joint of manus) AnnotationAssertion(Annotation( ) "The interphalangeal articulations of hand are hinge-joints of the phalanges of the hand. There are two sets (except in the thumb): 'proximal interphalangeal joints' (PIP), those between the first (also called proximal) and second (intermediate) phalanges 'distal interphalangeal joints' (DIP), those between the second and third (distal) phalanges A similar group of articulations also function in the toes.") AnnotationAssertion( "consider renaming: 'finger' is ambiguous as the term in some usages excludes the thumb (we include it)") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:36336") AnnotationAssertion( "FMA:35285") AnnotationAssertion( "NCIT:C32868") AnnotationAssertion(Annotation( "ncithesaurus:Interphalangeal_Joint_of_the_Hand") "UMLS:C0016125") AnnotationAssertion(Annotation( ) "articulationes digitorum manus") AnnotationAssertion(Annotation( ) "articulationes interphalangeae manus") AnnotationAssertion(Annotation( "FMA:35285") "interphalangeal joint of hand") AnnotationAssertion(Annotation( "FMA:35285") Annotation( "NCBITaxon:9606"^^xsd:string) Annotation( ) "interphalangeal joint of finger") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:35285") "IP joint") AnnotationAssertion(Annotation( ) "articulations of the digits") AnnotationAssertion(Annotation( ) "interphalangeal articulations of hand") AnnotationAssertion(Annotation( ) "interphalangeal joints of hand") AnnotationAssertion( "UBERON:0007722") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "interphalangeal joint of manus") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectIntersectionOf(ObjectMinCardinality(2 ) ObjectMaxCardinality(2 ))) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "two in series") ObjectSomeValuesFrom( )) # Class: (interphalangeal joint of manual digit 1) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An interphalangeal joint of manus that is part of a manual digit 1.") AnnotationAssertion( "in humans, this connects proximal and distal phalanges of the thumb, so there is only a single inter-phalangeal joint - i.e. there is no distinct proximal and distal joints") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:25058") AnnotationAssertion( "FMA:35312") AnnotationAssertion( "NCIT:C102306") AnnotationAssertion(Annotation( "FMA:35312") "interphalangeal joint of first digit of hand") AnnotationAssertion( "interphalangeal joint of hand digit 1") AnnotationAssertion( "interphalangeal joint of manual digit 1") AnnotationAssertion(Annotation( ) Annotation( ) "interphalangeal joint of manual digit I") AnnotationAssertion( "interphalangeal joint of pollex") AnnotationAssertion(Annotation( "FMA:35312") Annotation( "NCBITaxon:9606"^^xsd:string) Annotation( ) "interphalangeal joint of thumb") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007723") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "interphalangeal joint of manual digit 1") SubClassOf( ) SubClassOf( ObjectIntersectionOf(ObjectMinCardinality(2 ) ObjectMaxCardinality(2 ))) SubClassOf( ObjectSomeValuesFrom( )) # Class: (interphalangeal joint of pedal digit 1) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An interphalangeal joint of pes that is part of a pedal digit 1.") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:26430") AnnotationAssertion( "FMA:35353") AnnotationAssertion(Annotation( "FMA:35353") "interphalangeal joint of first digit of foot") AnnotationAssertion(Annotation( "FMA:35353") "interphalangeal joint of first digit of pes") AnnotationAssertion( "interphalangeal joint of foot digit 1") AnnotationAssertion(Annotation( "FMA:35353") "interphalangeal joint of great toe") AnnotationAssertion( "interphalangeal joint of hallux") AnnotationAssertion( "interphalangeal joint of pedal digit 1") AnnotationAssertion(Annotation( ) Annotation( ) "interphalangeal joint of pedal digit I") AnnotationAssertion(Annotation( "FMA:35353") Annotation( "NCBITaxon:9606"^^xsd:string) Annotation( ) "interphalangeal joint of big toe") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:35353") "interphalangeal joint of first toe") AnnotationAssertion( "UBERON:0007724") AnnotationAssertion(rdfs:label "interphalangeal joint of pedal digit 1") SubClassOf( ) SubClassOf( ObjectIntersectionOf(ObjectMinCardinality(2 ) ObjectMaxCardinality(2 ))) SubClassOf( ObjectSomeValuesFrom( )) # Class: (interphalangeal joint of pedal digit 2) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An interphalangeal joint of pes that is part of a pedal digit 2.") AnnotationAssertion( "EMAPA:26448") AnnotationAssertion( "FMA:35356") AnnotationAssertion(Annotation( ) Annotation( ) "interphalangeal joint of pedal digit II") AnnotationAssertion(Annotation( "FMA:35356") "interphalangeal joint of second digit of foot") AnnotationAssertion(Annotation( "FMA:35356") Annotation( "NCBITaxon:9606"^^xsd:string) Annotation( ) "interphalangeal joint of second toe") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007725") AnnotationAssertion(rdfs:label "interphalangeal joint of pedal digit 2") SubClassOf( ) SubClassOf( ObjectIntersectionOf(ObjectMinCardinality(2 ) ObjectMaxCardinality(2 ))) SubClassOf( ObjectSomeValuesFrom( )) # Class: (interphalangeal joint of pedal digit 3) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An interphalangeal joint of pes that is part of a pedal digit 3.") AnnotationAssertion( "EMAPA:26454") AnnotationAssertion( "FMA:35359") AnnotationAssertion(Annotation( ) Annotation( ) "interphalangeal joint of pedal digit III") AnnotationAssertion(Annotation( "FMA:35359") "interphalangeal joint of third digit of foot") AnnotationAssertion(Annotation( "FMA:35359") Annotation( "NCBITaxon:9606"^^xsd:string) Annotation( ) "interphalangeal joint of third toe") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007726") AnnotationAssertion(rdfs:label "interphalangeal joint of pedal digit 3") SubClassOf( ) SubClassOf( ObjectIntersectionOf(ObjectMinCardinality(2 ) ObjectMaxCardinality(2 ))) SubClassOf( ObjectSomeValuesFrom( )) # Class: (interphalangeal joint of pedal digit 4) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An interphalangeal joint of pes that is part of a pedal digit 4.") AnnotationAssertion( "EMAPA:26466") AnnotationAssertion( "FMA:35362") AnnotationAssertion(Annotation( "FMA:35362") "interphalangeal joint of fourth digit of foot") AnnotationAssertion(Annotation( ) Annotation( ) "interphalangeal joint of pedal digit IV") AnnotationAssertion(Annotation( "FMA:35362") Annotation( "NCBITaxon:9606"^^xsd:string) Annotation( ) "interphalangeal joint of fourth toe") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007727") AnnotationAssertion(rdfs:label "interphalangeal joint of pedal digit 4") SubClassOf( ) SubClassOf( ObjectIntersectionOf(ObjectMinCardinality(2 ) ObjectMaxCardinality(2 ))) SubClassOf( ObjectSomeValuesFrom( )) # Class: (interphalangeal joint of pedal digit 5) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An interphalangeal joint of pes that is part of a pedal digit 5.") AnnotationAssertion( "EMAPA:26478") AnnotationAssertion( "FMA:35365") AnnotationAssertion(Annotation( "FMA:35365") "interphalangeal joint of fifth digit of foot") AnnotationAssertion(Annotation( "FMA:35365") "interphalangeal joint of fifth toe") AnnotationAssertion(Annotation( ) Annotation( ) "interphalangeal joint of pedal digit V") AnnotationAssertion(Annotation( "FMA:35365") Annotation( "NCBITaxon:9606"^^xsd:string) Annotation( ) "interphalangeal joint of little toe") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007728") AnnotationAssertion(rdfs:label "interphalangeal joint of pedal digit 5") SubClassOf( ) SubClassOf( ObjectIntersectionOf(ObjectMinCardinality(2 ) ObjectMaxCardinality(2 ))) SubClassOf( ObjectSomeValuesFrom( )) # Class: (interphalangeal joint of manual digit 2) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An interphalangeal joint of manus that is part of a manual digit 2.") AnnotationAssertion( "EMAPA:25061") AnnotationAssertion( "FMA:35397") AnnotationAssertion(Annotation( ) Annotation( ) "interphalangeal joint of manual digit II") AnnotationAssertion(Annotation( "FMA:35397") "interphalangeal joint of second digit of hand") AnnotationAssertion(Annotation( "FMA:35397") "interphalangeal joint of second finger") AnnotationAssertion(Annotation( "FMA:35397") Annotation( "NCBITaxon:9606"^^xsd:string) Annotation( ) "interphalangeal joint of index finger") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007729") AnnotationAssertion(rdfs:label "interphalangeal joint of manual digit 2") SubClassOf( ) SubClassOf( ObjectIntersectionOf(ObjectMinCardinality(2 ) ObjectMaxCardinality(2 ))) SubClassOf(Annotation( "EMAPA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (interphalangeal joint of manual digit 3) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An interphalangeal joint of manus that is part of a manual digit 3.") AnnotationAssertion( "EMAPA:25064") AnnotationAssertion( "FMA:35400") AnnotationAssertion(Annotation( ) Annotation( ) "interphalangeal joint of manual digit III") AnnotationAssertion(Annotation( "FMA:35400") "interphalangeal joint of third digit of hand") AnnotationAssertion(Annotation( "FMA:35400") "interphalangeal joint of third finger") AnnotationAssertion(Annotation( "FMA:35400") Annotation( "NCBITaxon:9606"^^xsd:string) Annotation( ) "interphalangeal joint of middle finger") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007730") AnnotationAssertion(rdfs:label "interphalangeal joint of manual digit 3") SubClassOf( ) SubClassOf( ObjectIntersectionOf(ObjectMinCardinality(2 ) ObjectMaxCardinality(2 ))) SubClassOf( ObjectSomeValuesFrom( )) # Class: (interphalangeal joint of manual digit 4) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An interphalangeal joint of manus that is part of a manual digit 4.") AnnotationAssertion( "EMAPA:25067") AnnotationAssertion( "FMA:35403") AnnotationAssertion(Annotation( "FMA:35403") "interphalangeal joint of fourth digit of hand") AnnotationAssertion(Annotation( "FMA:35403") "interphalangeal joint of fourth finger") AnnotationAssertion(Annotation( ) Annotation( ) "interphalangeal joint of manual digit IV") AnnotationAssertion(Annotation( "FMA:35403") Annotation( "NCBITaxon:9606"^^xsd:string) Annotation( ) "interphalangeal joint of ring finger") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007731") AnnotationAssertion(rdfs:label "interphalangeal joint of manual digit 4") SubClassOf( ) SubClassOf( ObjectIntersectionOf(ObjectMinCardinality(2 ) ObjectMaxCardinality(2 ))) SubClassOf( ObjectSomeValuesFrom( )) # Class: (interphalangeal joint of manual digit 5) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An interphalangeal joint of manus that is part of a manual digit 5.") AnnotationAssertion( "EMAPA:25070") AnnotationAssertion( "FMA:35407") AnnotationAssertion(Annotation( "FMA:35407") "interphalangeal joint of fifth digit of hand") AnnotationAssertion(Annotation( "FMA:35407") "interphalangeal joint of fifth finger") AnnotationAssertion(Annotation( ) Annotation( ) "interphalangeal joint of manual digit V") AnnotationAssertion(Annotation( "FMA:35407") Annotation( "NCBITaxon:9606"^^xsd:string) Annotation( ) "interphalangeal joint of little finger") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007732") AnnotationAssertion(rdfs:label "interphalangeal joint of manual digit 5") SubClassOf( ) SubClassOf( ObjectIntersectionOf(ObjectMinCardinality(2 ) ObjectMaxCardinality(2 ))) SubClassOf( ObjectSomeValuesFrom( )) # Class: (metacarpophalangeal joint of manual digit 1) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A skeletal joint that connects a metacarpal bone and connects a proximal phalanx of manual digit 1.") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:25057") AnnotationAssertion( "FMA:35249") AnnotationAssertion( "metacarpophalangeal joint of digit 1") AnnotationAssertion(Annotation( "FMA:35249") "metacarpophalangeal joint of first digit of hand") AnnotationAssertion(Annotation( ) Annotation( ) "metacarpophalangeal joint of manual digit I") AnnotationAssertion(Annotation( "EMAPA:25057") "metacarpo-phalangeal joint of digit 1 of fore-paw") AnnotationAssertion(Annotation( "FMA:35249") Annotation( "NCBITaxon:9606"^^xsd:string) Annotation( ) "metacarpophalangeal joint of thumb") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007735") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "metacarpophalangeal joint of manual digit 1") SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (metacarpophalangeal joint of manual digit 2) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A skeletal joint that connects a metacarpal bone and connects a proximal phalanx of manual digit 2.") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:25060") AnnotationAssertion( "FMA:35252") AnnotationAssertion( "metacarpophalangeal joint of digit 2") AnnotationAssertion(Annotation( ) Annotation( ) "metacarpophalangeal joint of manual digit II") AnnotationAssertion(Annotation( "FMA:35252") "metacarpophalangeal joint of second digit of hand") AnnotationAssertion(Annotation( "FMA:35252") "metacarpophalangeal joint of second finger") AnnotationAssertion(Annotation( "EMAPA:25060") "metacarpo-phalangeal joint of digit 2 of fore-paw") AnnotationAssertion(Annotation( "FMA:35252") Annotation( "NCBITaxon:9606"^^xsd:string) Annotation( ) "metacarpophalangeal joint of index finger") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007738") AnnotationAssertion(rdfs:label "metacarpophalangeal joint of manual digit 2") SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (metacarpophalangeal joint of manual digit 3) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A skeletal joint that connects a metacarpal bone and connects a proximal phalanx of manual digit 3.") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:25063") AnnotationAssertion( "FMA:35255") AnnotationAssertion( "metacarpophalangeal joint of digit 3") AnnotationAssertion(Annotation( ) Annotation( ) "metacarpophalangeal joint of manual digit III") AnnotationAssertion(Annotation( "FMA:35255") "metacarpophalangeal joint of third digit of hand") AnnotationAssertion(Annotation( "FMA:35255") "metacarpophalangeal joint of third finger") AnnotationAssertion(Annotation( "NCBITaxon:8782"^^xsd:string) Annotation( ) "carpometacarpophalangeal joint of third digit") AnnotationAssertion(Annotation( "EMAPA:25063") "metacarpo-phalangeal joint of digit 3 of fore-paw") AnnotationAssertion(Annotation( "FMA:35255") Annotation( "NCBITaxon:9606"^^xsd:string) Annotation( ) "metacarpophalangeal joint of middle finger") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007741") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "metacarpophalangeal joint of manual digit 3") SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (metacarpophalangeal joint of manual digit 4) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A skeletal joint that connects a metacarpal bone and connects a proximal phalanx of manual digit 4.") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:25066") AnnotationAssertion( "FMA:35258") AnnotationAssertion( "metacarpophalangeal joint of digit 4") AnnotationAssertion(Annotation( "FMA:35258") "metacarpophalangeal joint of fourth digit of hand") AnnotationAssertion(Annotation( "FMA:35258") "metacarpophalangeal joint of fourth finger") AnnotationAssertion(Annotation( ) Annotation( ) "metacarpophalangeal joint of manual digit IV") AnnotationAssertion(Annotation( "NCBITaxon:8782"^^xsd:string) Annotation( ) "carpometacarpophalangeal joint of fourth digit") AnnotationAssertion(Annotation( "EMAPA:25066") "metacarpo-phalangeal joint of digit 4 of fore-paw") AnnotationAssertion(Annotation( "FMA:35258") Annotation( "NCBITaxon:9606"^^xsd:string) Annotation( ) "metacarpophalangeal joint of ring finger") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007744") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "metacarpophalangeal joint of manual digit 4") SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (metacarpophalangeal joint of manual digit 5) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A skeletal joint that connects a metacarpal bone and connects a proximal phalanx of manual digit 5.") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:25069") AnnotationAssertion( "FMA:35261") AnnotationAssertion( "metacarpophalangeal joint of digit 5") AnnotationAssertion(Annotation( "FMA:35261") "metacarpophalangeal joint of fifth digit of hand") AnnotationAssertion(Annotation( "FMA:35261") "metacarpophalangeal joint of fifth finger") AnnotationAssertion(Annotation( ) Annotation( ) "metacarpophalangeal joint of manual digit V") AnnotationAssertion(Annotation( "EMAPA:25069") "metacarpo-phalangeal joint of digit 5 of fore-paw") AnnotationAssertion(Annotation( "FMA:35261") Annotation( "NCBITaxon:9606"^^xsd:string) Annotation( ) "metacarpophalangeal joint of little finger") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007747") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "metacarpophalangeal joint of manual digit 5") SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (metatarsophalangeal joint of pedal digit 1) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A skeletal joint that connects a metatarsal bone and connects a distal phalanx of pedal digit 1.") AnnotationAssertion(Annotation( "EMAPA"^^xsd:string) "the name of the structure in EMAPA is incorrect") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:26436") AnnotationAssertion( "FMA:35228") AnnotationAssertion( "NCIT:C102321") AnnotationAssertion( "first metatarsophalangeal joint") AnnotationAssertion(Annotation( "FMA:35228") "metatarsophalangeal joint of first digit of foot") AnnotationAssertion(Annotation( "FMA:35228") "metatarsophalangeal joint of great toe") AnnotationAssertion(Annotation( ) Annotation( ) "metatarsophalangeal joint of pedal digit I") AnnotationAssertion(Annotation( "FMA:35228") Annotation( "NCBITaxon:9606"^^xsd:string) Annotation( ) "metatarsophalangeal joint of big toe") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:35228") "metatarsophalangeal joint of first toe") AnnotationAssertion( "UBERON:0007750") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "metatarsophalangeal joint of pedal digit 1") SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (metatarsophalangeal joint of pedal digit 2) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A skeletal joint that connects a metatarsal bone and connects a distal phalanx of pedal digit 2.") AnnotationAssertion(Annotation( "EMAPA"^^xsd:string) "the name of the structure in EMAPA is incorrect") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:26442") AnnotationAssertion( "FMA:35231") AnnotationAssertion(Annotation( ) Annotation( ) "metatarsophalangeal joint of pedal digit II") AnnotationAssertion(Annotation( "FMA:35231") "metatarsophalangeal joint of second digit of foot") AnnotationAssertion(Annotation( "FMA:35231") Annotation( "NCBITaxon:9606"^^xsd:string) Annotation( ) "metatarsophalangeal joint of second toe") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007753") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "metatarsophalangeal joint of pedal digit 2") SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (metatarsophalangeal joint of pedal digit 3) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A skeletal joint that connects a metatarsal bone and connects a distal phalanx of pedal digit 3.") AnnotationAssertion(Annotation( "EMAPA"^^xsd:string) "the name of the structure in EMAPA is incorrect") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:26460") AnnotationAssertion( "FMA:35234") AnnotationAssertion(Annotation( ) Annotation( ) "metatarsophalangeal joint of pedal digit III") AnnotationAssertion(Annotation( "FMA:35234") "metatarsophalangeal joint of third digit of foot") AnnotationAssertion(Annotation( "FMA:35234") Annotation( "NCBITaxon:9606"^^xsd:string) Annotation( ) "metatarsophalangeal joint of third toe") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007756") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "metatarsophalangeal joint of pedal digit 3") SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (metatarsophalangeal joint of pedal digit 4) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A skeletal joint that connects a metatarsal bone and connects a distal phalanx of pedal digit 4.") AnnotationAssertion(Annotation( "EMAPA"^^xsd:string) "the name of the structure in EMAPA is incorrect") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:26472") AnnotationAssertion( "FMA:35237") AnnotationAssertion(Annotation( "FMA:35237") "metatarsophalangeal joint of fourth digit of foot") AnnotationAssertion(Annotation( ) Annotation( ) "metatarsophalangeal joint of pedal digit IV") AnnotationAssertion(Annotation( "FMA:35237") Annotation( "NCBITaxon:9606"^^xsd:string) Annotation( ) "metatarsophalangeal joint of fourth toe") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007759") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "metatarsophalangeal joint of pedal digit 4") SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (metatarsophalangeal joint of pedal digit 5) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A skeletal joint that connects a metatarsal bone and connects a distal phalanx of pedal digit 5.") AnnotationAssertion(Annotation( "EMAPA"^^xsd:string) "the name of the structure in EMAPA is incorrect") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:26484") AnnotationAssertion( "FMA:35240") AnnotationAssertion(Annotation( "FMA:35240") "metatarsophalangeal joint of fifth digit of foot") AnnotationAssertion(Annotation( "FMA:35240") "metatarsophalangeal joint of fifth toe") AnnotationAssertion(Annotation( ) Annotation( ) "metatarsophalangeal joint of pedal digit V") AnnotationAssertion(Annotation( "FMA:35240") Annotation( "NCBITaxon:9606"^^xsd:string) Annotation( ) "metatarsophalangeal joint of little toe") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007762") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "metatarsophalangeal joint of pedal digit 5") SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (cerebellum vermis culmen) AnnotationAssertion(Annotation( ) "The culmen is the portion of the anterior vermis adjacent to the primary fissure of cerebellum. The culmen and the anterior parts of the quadrangular lobules form the lobus culminis[WP].") AnnotationAssertion( "The culmen lobule (lobules IV/V) is a single structure in humans, but it is divided by the intraculminate fissure in many rodents. In some mouse strains such as SLJ/J, the intraculminate fissure is absent, in some strains such as DBA/2J it is present, and other strains (C57BL/10J and BALB/cJ) exhibit considerable variablility (PMID: 1953602).[MP]") AnnotationAssertion(Annotation( "ABA") "ABA splits culmen into IV and V and IV-V") AnnotationAssertion(Annotation( "BIRNLEX:926") Annotation( "MA:0001001") "culmen") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:CUL") AnnotationAssertion( "BAMS:Cul") AnnotationAssertion( "BIRNLEX:926") AnnotationAssertion( "FMA:83886") AnnotationAssertion( "MBA:928") AnnotationAssertion(Annotation( "UBERON:cjm"^^xsd:string) "cerebellum culmen") AnnotationAssertion(Annotation( "UBERON:cjm"^^xsd:string) "culmen lobule") AnnotationAssertion(Annotation( "FMA:83886") "neuraxis culmen") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:83886") "culmen of vermis") AnnotationAssertion(Annotation( "FMA:83886") "lobule IV and V of vermis") AnnotationAssertion( "UBERON:0007763") AnnotationAssertion(rdfs:label "cerebellum vermis culmen") SubClassOf(Annotation( "ABA"^^xsd:string) ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (paramedian reticular nucleus) AnnotationAssertion(Annotation( ) "A medullary nucleus that sends its connections to the spinal cord in a mostly ipsilateral manner.") AnnotationAssertion( "TODO - check") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:PMR") AnnotationAssertion( "BAMS:PMn") AnnotationAssertion( "BAMS:VPRt") AnnotationAssertion( "DHBA:12496") AnnotationAssertion( "FMA:72583") AnnotationAssertion( "MBA:995") AnnotationAssertion( "NLX:151902") AnnotationAssertion(Annotation( "FMA:72583") "ventral paramedian reticular nucleus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "nucleus reticularis paramedianus") AnnotationAssertion(Annotation( ) Annotation( ) "paramedian nucleus reticularis") AnnotationAssertion( "UBERON:0007764") AnnotationAssertion(rdfs:comment "A medullary nucleus that sends its connections to the spinal cord in a mostly ipsilateral manner, although there is some decussation. It projects to the vermis in the anterior lobe, the pyramis and the uvula. The paramedian nucleus also projects to the contralateral PRN, the gigantocellular nucleus, and the nucleus ambiguous. The paramedian reticular formation is adjacent to the abducens (VI)nucleus in the pons and adjacent to the oculomotor nucleus(III) in the midbrain. The paramedian nucleus receives afferents mostly from the fastigial nucleus in the cerebellum and the cerebral cortex; however, the projections from the spinal cord are very sparse. The descending afferent connections come mostly from the frontal and parietal lobes; however the pontine reticular formation also sends projections to the paramedian reticular nucleus. There are also very sparse innervations from the superior colliculus. Lesions in the paramedian reticular nucleus have been shown to cause a stereotyped increase in the random patterns of motion in rats. The paramedian nuclei on either side of the brain stem have been shown to mediate the horizontal eye movements on their ipsilateral sides. It seems possible that that the random motion patterns of the above rats were caused by an inability to mediate their horizontal eye movements") AnnotationAssertion(rdfs:label "paramedian reticular nucleus") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (dorsal premammillary nucleus) AnnotationAssertion( ) AnnotationAssertion( "BAMS:PMd") AnnotationAssertion( "DMBA:15719") AnnotationAssertion( "FMA:77006") AnnotationAssertion( "HBA:4677") AnnotationAssertion( "MBA:980") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BAMS:PMd") "premammillary nucleus dorsal part") AnnotationAssertion( "UBERON:0007767") AnnotationAssertion(rdfs:label "dorsal premammillary nucleus") SubClassOf( ) # Class: (ventral premammillary nucleus) AnnotationAssertion( ) AnnotationAssertion( "BAMS:PMv") AnnotationAssertion( "FMA:77007") AnnotationAssertion( "HBA:4678") AnnotationAssertion( "MBA:1004") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BAMS:PMv") "premammillary nucleus ventral part") AnnotationAssertion( "UBERON:0007768") AnnotationAssertion(rdfs:label "ventral premammillary nucleus") SubClassOf( ) # Class: (medial preoptic region) AnnotationAssertion( "BAMS:MPA") AnnotationAssertion( "BAMS:MPO") AnnotationAssertion( "DHBA:266441547") AnnotationAssertion( "EMAPA:35550") AnnotationAssertion( "HBA:4543") AnnotationAssertion( "MA:0000839") AnnotationAssertion( "MBA:523") AnnotationAssertion(Annotation( "ABA:MPO") "medial preoptic area") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BAMS:MPO") "medial preopticarea") AnnotationAssertion( "UBERON:0007769") AnnotationAssertion(rdfs:label "medial preoptic region") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "MA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (epidermis gland) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A gland that is part of a epidermis.") AnnotationAssertion( "FMA:59153") AnnotationAssertion( "epidermal gland") AnnotationAssertion(Annotation( "FMA:59153") "gland of epidermis") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007771") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "epidermis gland") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (scrotal sweat) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "Any portion of sweat that is produced by a sweat gland of the scrotum.") AnnotationAssertion( "FMA:73266") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "scrotum sweat") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "sweat of scrotal sac") AnnotationAssertion(Annotation( "FMA:73266") "sweat of scrotum") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007772") AnnotationAssertion(rdfs:label "scrotal sweat") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (scrotal sweat gland) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "Any sweat gland that is part of a scrotum.") AnnotationAssertion( "EMAPA:29743") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007773") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "scrotal sweat gland") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (secondary dentition) AnnotationAssertion(Annotation( "MESH:A14.254.237") "The teeth of adulthood that either replace or are added to the complement of deciduous teeth. (Boucher's Clinical Dental Terminology, 4th ed).") AnnotationAssertion( "FMA:75152") AnnotationAssertion( "GAID:1251") AnnotationAssertion( "MESH:A14.254.237") AnnotationAssertion(Annotation( "FMA:75152") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "dentes permanentes") AnnotationAssertion(Annotation( "GAID:1251") "permanent dentition") AnnotationAssertion(Annotation( "FMA:75152") "permanent teeth") AnnotationAssertion(Annotation( "FMA:75152") "set of permanent teeth") AnnotationAssertion(Annotation( "FMA:75152") "set of secondary teeth") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "GAID:1251") "adult dentition") AnnotationAssertion(Annotation( "GAID:1251") "secondary dentition") AnnotationAssertion( "UBERON:0007774") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "secondary dentition") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (secondary tooth) AnnotationAssertion(Annotation( ) "A tooth that forms after a primary tooth.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:55654") AnnotationAssertion( "NCIT:C33313") AnnotationAssertion(Annotation( "ncithesaurus:Permanent_Tooth") "UMLS:C0348070") AnnotationAssertion(Annotation( "FMA:55654") "permanent tooth") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "dentes permanentes") AnnotationAssertion( "UBERON:0007775") AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "GAT in FMA") AnnotationAssertion(rdfs:label "secondary tooth") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/1/14/Teeth_by_David_Shankbone.jpg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (unerupted tooth) AnnotationAssertion(Annotation( "MESH:A14.254.860.715") "A normal developing tooth which has not yet perforated the oral mucosa or one that fails to erupt in the normal sequence or time interval expected for the type of tooth in a given gender, age, or population group.") AnnotationAssertion( "GAID:1268") AnnotationAssertion( "MESH:A14.254.860.715") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "GAID:1268") "unerupted teeth") AnnotationAssertion( "UBERON:0007776") AnnotationAssertion(rdfs:label "unerupted tooth") SubClassOf( ) # Class: (umbilical vein endothelium) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An endothelium that is part of a umbilical vein.") AnnotationAssertion( "BTO:0001416") AnnotationAssertion( "CALOHA:TS-1081") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007777") AnnotationAssertion(rdfs:label "umbilical vein endothelium") SubClassOf( ) SubClassOf(Annotation( "BTO"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (umbilical artery endothelium) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An endothelium that is part of a umbilical artery.") AnnotationAssertion( "BTO:0000857") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007778") AnnotationAssertion(rdfs:label "umbilical artery endothelium") SubClassOf( ) SubClassOf(Annotation( "BTO"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (transudate) AnnotationAssertion(Annotation( ) "Any bodily fluid that has passed through a membrane such as the capillary wall, as a result of unbalanced hydrostatic and osmotic forces.") AnnotationAssertion( "transudative") AnnotationAssertion( "characteristically low in protein and cellular content (unless there has been secondary concentration)") AnnotationAssertion( "FMA:12276") AnnotationAssertion( "GAID:1195") AnnotationAssertion( "MESH:D005122") AnnotationAssertion( "ncithesaurus:Transudate") AnnotationAssertion( "uberon") AnnotationAssertion( "plasma ultrafiltrate") AnnotationAssertion( "UBERON:0007779") AnnotationAssertion(rdfs:label "transudate") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses( ) # Class: (exudate) AnnotationAssertion(Annotation( "MESH:A12.383") "Fluids that is discharged from blood vessels usually arising from inflammation or injury.") AnnotationAssertion( "MESH:D005122") AnnotationAssertion( "ncithesaurus:Exudate") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007780") AnnotationAssertion(rdfs:comment "Some sources include transudate that has been mixed with cells etc") AnnotationAssertion(rdfs:label "exudate") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (secretion of serous gland) AnnotationAssertion(Annotation( "UBERON:cjm"^^xsd:string) "Any fluid produced by a serous gland.") AnnotationAssertion( "serous fluid") AnnotationAssertion( ) AnnotationAssertion(Annotation( ) "serosal fluid") AnnotationAssertion( "serous gland fluid") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007794") AnnotationAssertion(rdfs:label "secretion of serous gland") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (ascitic fluid) AnnotationAssertion(Annotation( "MESH:A12.207.119") "The serous fluid which accumulates in the peritoneal cavity in ascites.") AnnotationAssertion( "TODO - move to pathological anatomical entity ontology") AnnotationAssertion( "BTO:0000091") AnnotationAssertion( "GAID:1175") AnnotationAssertion( "MESH:D001202") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0000091") "ascites") AnnotationAssertion(Annotation( "BTO:0000091") "ascites fluid") AnnotationAssertion( "UBERON:0007795") AnnotationAssertion(rdfs:label "ascitic fluid") SubClassOf( ) SubClassOf(Annotation( "BTO"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (vascular system) AnnotationAssertion(Annotation( ) "Anatomical system that consists of all blood and lymph vessels.") AnnotationAssertion( "consider merging with vasculature") AnnotationAssertion(Annotation( "ncithesaurus:Vascular_System") "The cardiovascular and lymphatic systems, collectively[ncithesaurus:Vascular_System].") AnnotationAssertion(Annotation( "MA"^^xsd:string) "in both MA and BTO, the arterial system and venous sytem are subtypes of the vascular system") AnnotationAssertion( ) AnnotationAssertion( "BTO:0001085") AnnotationAssertion( "CALOHA:TS-2053") AnnotationAssertion( "EHDAA2:0004520") AnnotationAssertion( "EMAPA:35905") AnnotationAssertion( "MA:0002718") AnnotationAssertion( "NCIT:C33854") AnnotationAssertion(Annotation( "ncithesaurus:Vascular_System") "UMLS:C0489903") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007798") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "vascular system") SubClassOf( ) SubClassOf(Annotation( "MA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (mixed dentition) AnnotationAssertion(Annotation( "MESH:A14.254.229") "The complement of teeth in the jaws after the eruption of some of the permanent teeth but before all the deciduous teeth are absent. (Boucher's Clinical Dental Terminology, 4th ed).") AnnotationAssertion( ) AnnotationAssertion( "GAID:1250") AnnotationAssertion( "MESH:A14.254.229") AnnotationAssertion(Annotation( "GAID:1250") "transitional dentition") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007799") AnnotationAssertion(rdfs:label "mixed dentition") SubClassOf(Annotation( "GAID") ) # Class: (proatlas) AnnotationAssertion(Annotation( ) "A small, paired bony element (more rarely, having fused parts) located between the skull and the atlas in tuataras, crocodiles, chameleons, and many fossil reptiles; it is uncommon in turtles and mammals (hedgehog). The proatlas apparently develops from the ossified neural part of the sclerotome. Externally it resembles the neural arch of the vertebra, since it articulates anteriorly with the lateral occipital bone and posteriorly with the anterior articular process of the atlas.") AnnotationAssertion( "sometimes seen in humans as an anomaly.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007800") AnnotationAssertion(rdfs:label "proatlas") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (synsacrum) AnnotationAssertion(Annotation( ) "A region of the lower vertebral column formed from the fusion of vertebrae.") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0000740") Annotation( "AAO"^^xsd:string) Annotation( "AAO:Pugener_2002") "Complex of synostotically fused vertebrae supporting the pelvic girdle. In anurans, the synsacrum is formed by two vertebrae and the urostyle is fused to its posterior end.[AAO]") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0000740") Annotation( "AAO"^^xsd:string) "relationship loss: subclass portion of (AAO:0010428)[AAO]") AnnotationAssertion( "In amphibians, a complex of synostotically fused vertebrae supporting the pelvic girdle. In anurans, the synsacrum is formed by two vertebrae and the urostyle is fused to its posterior end[AAO:Pugener_2002]") AnnotationAssertion( "In birds and dinosaurs, the sacrum is extended by incorporation of additional fused or partially-fused caudal or lumbar vertebrae. The ilium of the pelvis is attached to the synsacrum and, in some species, may also be fused to it. Together with the pelvis this forms a rigid structure which carries the weight of the hind end of the animal. In living and some prehistoric birds, posterior to the synsacrum there are usually only a few free caudal vertebrae, on the end of which lies the pygostyle[Wikipedia:Synsacrum]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0000740") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007805") AnnotationAssertion(rdfs:comment "produced by fusion of last thoracics, all lumbars, all sacrals, & first few caudals;") AnnotationAssertion(rdfs:label "synsacrum") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) SubClassOf( ObjectSomeValuesFrom( )) # Class: (connecting stalk) AnnotationAssertion(Annotation( ) "A bridge of mesoderm connecting the caudal end of the young embryo with the trophoblastic tissues; the precursor of the umbilical cord.") AnnotationAssertion( "TODO - this is currently defined as a bridge of mesoderm, but in EHDAA2 is extraembryonic structure split into mesoderm and blood vessels") AnnotationAssertion( ) AnnotationAssertion( "BTO:0004705") AnnotationAssertion( "NCIT:C34132") AnnotationAssertion(Annotation( "ncithesaurus:Connecting_Stalk") "UMLS:C1516792") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007806") AnnotationAssertion(rdfs:label "connecting stalk") SubClassOf(Annotation( "EHDAA2"^^xsd:string) ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (connecting stalk vasculature) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A vasculature that is part of a connecting stalk.") AnnotationAssertion( "EHDAA2:0000313") AnnotationAssertion(Annotation( "EHDAA2:0000313") "connecting stalk blood vessels") AnnotationAssertion( "uberon") AnnotationAssertion( "connecting stalk blood vessel") AnnotationAssertion( "vasculature of connecting stalk") AnnotationAssertion( "UBERON:0007807") AnnotationAssertion(rdfs:label "connecting stalk vasculature") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (adipose tissue of abdominal region) AnnotationAssertion(Annotation( ) Annotation( ) Annotation( "CALOHA:paula") Annotation( "MGI:csmith"^^xsd:string) "Adipose tissue that is located in the abdominal region. This includes any subcutaneous fat, visceral fat or encapsulated adipose tissue depots.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "CALOHA:TS-0002") AnnotationAssertion( "EFO:0003771") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0004041") "abdominal adipose tissue") AnnotationAssertion(Annotation( "BTO:0004041") "abdominal fat") AnnotationAssertion(Annotation( "BTO:0004041") "intra-abdominal fat") AnnotationAssertion( "UBERON:0007808") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "adipose tissue of abdominal region") SubClassOf( ) SubClassOf( ) # Class: (fascia of Camper) AnnotationAssertion(Annotation( ) "The superficial layer (fascia of Camper) is a thick superficial layer of the anterior abdominal wall. It is areolar in texture, and contains in its meshes a varying quantity of adipose tissue. It is found superficial to Scarpa's fascia.") AnnotationAssertion( ) AnnotationAssertion( "FMA:19922") AnnotationAssertion(Annotation( ) "Camper's fascia") AnnotationAssertion(Annotation( "FMA:19922") "adipose layer of superficial fascia of abdomen") AnnotationAssertion(Annotation( "FMA:19922") "camper's fascia") AnnotationAssertion(Annotation( "FMA:19922") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "fascia investiens intermedia abdominis") AnnotationAssertion(Annotation( "FMA:19922") "fatty layer of subcutaneous tissue of abdomen") AnnotationAssertion(Annotation( "FMA:19922") "fatty layer of superficial fascia of abdomen") AnnotationAssertion(Annotation( "FMA:19922") "intermediate investing fascia of abdomen") AnnotationAssertion(Annotation( "FMA:19922") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "panniculus adiposus telae subcutaneae abdominis") AnnotationAssertion(Annotation( "FMA:19922") "superficial layer of superficial fascia of abdomen") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "panniculus adiposus abdominis") AnnotationAssertion( "UBERON:0007809") AnnotationAssertion(rdfs:label "fascia of Camper") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/2/28/Gray393.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "Wikipedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "Wikipedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (craniocervical region) AnnotationAssertion(Annotation( ) "The anteriormost subdivision of the body that includes the head, jaws, pharyngeal region and the neck (if present). In vertebrates this is the subdivision that includes the cervical vertebrae.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "CALOHA:TS-2356") AnnotationAssertion( "EV:0100009") AnnotationAssertion( "FMA:280881") AnnotationAssertion( "MA:0000006") AnnotationAssertion( "NCIT:C12418") AnnotationAssertion(Annotation( "ncithesaurus:Head_and_Neck") "UMLS:C0460004") AnnotationAssertion( "WikipediaCategory:Head_and_neck") AnnotationAssertion( "galen:HeadAndNeck") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "cephalic area") AnnotationAssertion(Annotation( ) "cephalic part of animal") AnnotationAssertion(Annotation( ) "cephalic region") AnnotationAssertion(Annotation( "FMA:280881") "head and neck") AnnotationAssertion( "head or neck") AnnotationAssertion( "UBERON:0007811") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "craniocervical region") SubClassOf(Annotation( "MA"^^xsd:string) ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (major alar cartilage) AnnotationAssertion(Annotation( ) "The greater alar cartilage (lower lateral cartilage) is a thin, flexible plate, situated immediately below the preceding, and bent upon itself in such a manner as to form the medial wall and lateral wall of the naris of its own side. The portion which forms the medial wall (crus mediale) is loosely connected with the corresponding portion of the opposite cartilage, the two forming, together with the thickened integument and subjacent tissue, the septum mobile nasi. The part which forms the lateral wall (crus laterale) is curved to correspond with the ala of the nose; it is oval and flattened, narrow behind, where it is connected with the frontal process of the maxilla by a tough fibrous membrane, in which are found three or four small cartilaginous plates, the lesser alar cartilages (cartilagines alares minores; sesamoid cartilages). Above, it is connected by fibrous tissue to the lateral cartilage and front part of the cartilage of the septum; below, it falls short of the margin of the naris, the ala being completed by fatty and fibrous tissue covered by skin. In front, the greater alar cartilages are separated by a notch which corresponds with the apex of the nose.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:59504") AnnotationAssertion(Annotation( "FMA:59504") "cartilago alaris major") AnnotationAssertion(Annotation( "FMA:59504") "greater alar cartilage") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "cartilago alaris major") AnnotationAssertion( "UBERON:0007818") AnnotationAssertion(rdfs:label "major alar cartilage") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/e/e1/Gray852.png"^^xsd:anyURI) SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (minor alar cartilage) AnnotationAssertion(Annotation( ) "The part which forms the lateral wall is curved to correspond with the ala of the nose; it is oval and flattened, narrow behind, where it is connected with the frontal process of the maxilla by a tough fibrous membrane, in which are found three or four small cartilaginous plates, the lesser alar cartilages.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:59507") AnnotationAssertion(Annotation( "FMA:59507") "lesser alar cartilage") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "cartilago alaris minor") AnnotationAssertion(Annotation( ) "lesser alar cartilages") AnnotationAssertion( "UBERON:0007819") AnnotationAssertion(rdfs:label "minor alar cartilage") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/e/e1/Gray852.png"^^xsd:anyURI) SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (accessory nasal cartilage) AnnotationAssertion(Annotation( ) "Small cartilages of the nose connecting the greater alar cartilage and lateral nasal cartilage.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:59510") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "cartilago nasi accessoriae") AnnotationAssertion( "UBERON:0007820") AnnotationAssertion(rdfs:label "accessory nasal cartilage") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (lateral nasal cartilage) AnnotationAssertion(Annotation( ) "The lateral cartilage (upper lateral cartilage) is situated below the inferior margin of the nasal bone, and is flattened, and triangular in shape.[WP].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:59511") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "cartilago nasi lateralis") AnnotationAssertion( "UBERON:0007821") AnnotationAssertion(rdfs:label "lateral nasal cartilage") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/e/e1/Gray852.png"^^xsd:anyURI) SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (vomeronasal cartilage) AnnotationAssertion(Annotation( ) "The vomeronasal cartilage (or Jacobson's cartilage) is a narrow strip of cartilage, low on the medial wall of the nasal cavity. It lies between the cartilaginous nasal septum and the vomer. The cartilage lies below, but is not connected to, the rudimentary vomeronasal organ of Jacobson[WP].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:59514") AnnotationAssertion(Annotation( "FMA:59514") "Huschke's cartilage") AnnotationAssertion(Annotation( "FMA:59514") "Jacobson's cartilage") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "cartilago vomeronasalis") AnnotationAssertion( "UBERON:0007822") AnnotationAssertion(rdfs:label "vomeronasal cartilage") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/8/84/Gray51.png"^^xsd:anyURI) SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (appendage girdle region) AnnotationAssertion(Annotation( ) Annotation( "UBERONREF:0000003"^^xsd:string) "An organism subdivision that encompasses the region containing the pectoral or pelvic girdle. Note that this includes both the skeletal elements and associated tissues (integument, muscle, etc).") AnnotationAssertion( "this encompasses non-skeletal tissue") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "VSAO:0000303") Annotation( "VSAO"^^xsd:string) Annotation( ) "An organism subdivision that encompasses the region containing the pectoral or pelvic girdle. Note that this includes both the skeletal elements and associated tissues (integument, muscle, etc). There are only two instances of appendage girdle regions per organism.[VSAO]") AnnotationAssertion( "UBERON:0007824") AnnotationAssertion( "girdle") AnnotationAssertion( "girdle region") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37854") AnnotationAssertion( "FMA:24874") AnnotationAssertion( "VSAO:0000303") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "fin girdle") AnnotationAssertion(Annotation( ) "fin girdle region") AnnotationAssertion(Annotation( ) "limb girdle") AnnotationAssertion(Annotation( ) "limb girdle region") AnnotationAssertion( "UBERON:0007823") AnnotationAssertion(rdfs:label "appendage girdle region") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (reticular membrane of spiral organ) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A reticular lamina of epithelium that is part of a spiral organ of cochlea.") AnnotationAssertion(Annotation( "MA:0001194") "reticular lamina") AnnotationAssertion( "EMAPA:35735") AnnotationAssertion( "FMA:77849") AnnotationAssertion( "MA:0001194") AnnotationAssertion(Annotation( "FMA:77849") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "membrana reticularis organi spiralis") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "reticular lamina of spiral organ") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "reticular lamina of spiral organ of cochlea") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007825") AnnotationAssertion(rdfs:label "reticular membrane of spiral organ") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (peritoneal mesentery) AnnotationAssertion(Annotation( "UBERON:cjm"^^xsd:string) "Mesentery that is located in the peritoneum.") AnnotationAssertion( "FMA:20570") AnnotationAssertion( "TAO:0005129") AnnotationAssertion( "XAO:0000138") AnnotationAssertion( "ZFA:0005129") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007826") AnnotationAssertion(rdfs:label "peritoneal mesentery") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (external nose) AnnotationAssertion(Annotation( ) "External part of the nose containing the external nares.") AnnotationAssertion(Annotation( "FMA:59515") "Subdivision of face, the exterior of the nose, which consists of a root, dorsum, tip, columella, and right and left alae[FMA:59515].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37831") AnnotationAssertion( "FMA:59515") AnnotationAssertion( "NCIT:C32566") AnnotationAssertion(Annotation( "ncithesaurus:External_Nose") "UMLS:C0458561") AnnotationAssertion( "uberon") AnnotationAssertion( "nose") AnnotationAssertion( "UBERON:0007827") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "external nose") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (girdle bone/zone) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A bone that is part of a appendage girdle region.") AnnotationAssertion( "EMAPA:35379") AnnotationAssertion( "MA:0000291") AnnotationAssertion(Annotation( "MA:0000291") "girdle bone") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007828") AnnotationAssertion(rdfs:label "girdle bone/zone") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pectoral girdle bone) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A bone that is part of a pectoral girdle region.") AnnotationAssertion( "EMAPA:35669") AnnotationAssertion( "MA:0000292") AnnotationAssertion( "bone of pectoral girdle") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007829") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "pectoral girdle bone") SubClassOf(Annotation( "MA"^^xsd:string) ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pelvic girdle bone/zone) AnnotationAssertion(Annotation( ) "A bone element or fused bone that is part of pelvic girdle.") AnnotationAssertion( "check sacrum, coccyx (MA does NOT include these)") AnnotationAssertion( "typically the ilium, ischium and pubis. These can alternately be considered individual bones, or zones of a single fused bone") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:18028") AnnotationAssertion( "MA:0000293") AnnotationAssertion( "NCIT:C33287") AnnotationAssertion(Annotation( "ncithesaurus:Pelvic_Bone") "UMLS:C0030786") AnnotationAssertion( "bone of pelvic girdle") AnnotationAssertion(Annotation( "MA:0000293") "pelvic girdle bone") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007830") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "pelvic girdle bone/zone") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "MA"^^xsd:string) ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pectoral girdle skeleton) AnnotationAssertion(Annotation( ) "A subdivision of a limb or fin skeleton consisting of bones which connects the upper limb or fin to the axial skeleton on each side. It consists of the clavicle and scapula in humans and, in those species with three bones in the pectoral girdle, the coracoid. Some mammalian species (e.g. the dog and the horse) have only the scapula. In humans, the only joints between the shoulder girdle and axial skeleton are the sternoclavicular joints on each side. No joint exists between each scapula and the rib cage; instead the muscular connection between the two permits relatively great mobility of the shoulder girdle in relation to the pelvic girdle. In those species having only the scapula, no joint exists between the forelimb and the thorax, the only attachment being muscular[WP]. Examples: There are only two instances, right and left pectoral girdle skeletons.") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0000407") Annotation( "TAO"^^xsd:string) Annotation( "TAO:wd"^^xsd:string) "Anatomical cluster of paired dermal and endochondral bones that attaches to the dorso-posterior part of the cranium, and support the radials and pectoral fin. It consists of two components: the primary pectoral girdle consisting of the endochondral coracoid, scapula and mesocoracoid bones, and the secondary pectoral girdle consisting of the dermal posttemporal, supracleithrum, cleithrum and poscleithrum(thra) bones.[TAO]") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "VSAO:0000156") Annotation( "VSAO"^^xsd:string) Annotation( ) "Girdle skeleton consisting of a set of bones linking the axial series to the forelimb/fin skeleton and offering anchoring areas for forelimb/fin and caudal musculature.[VSAO]") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0000422") Annotation( "AAO"^^xsd:string) Annotation( "AAO:LAP"^^xsd:string) "Skeletal structure immediately behind the head attached to the vertebral column by muscles and supporting the forelimbs.[AAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001156") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0072528305 Kardong KV, Vertebrates: Comparative Anatomy, Function, Evolution (2006) p.336 and Figure 9.18") "The pectoral girdle is clearly of dual origin, composed of dermal as well as endochondral bones. The endochondral component, the scapulocoracoid, evolved by fusion or enlargment of several basal fin elements. (...) The dermal component of the shoulder girdle evolved from dermal bones of the body's surface. (...) Like endochondral bones, these dermal bones were passed along to tetrapods (...).[well established][VHOG]") AnnotationAssertion(Annotation( "VSAO") "Note that the VSAO and many ontologies use the label 'pectoral girdle' to denote the skeletal region specifically.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0000422") AnnotationAssertion( "AAO:0000754") AnnotationAssertion( "EFO:0000946") AnnotationAssertion( "EHDAA2:0001420") AnnotationAssertion( "FMA:24141") AnnotationAssertion( "MAT:0000181") AnnotationAssertion( "MIAA:0000181") AnnotationAssertion( "NCIT:C33547") AnnotationAssertion( "TAO:0000407") AnnotationAssertion(Annotation( "ncithesaurus:Shoulder_Girdle") "UMLS:C0427245") AnnotationAssertion( "VHOG:0001156") AnnotationAssertion( "VSAO:0000156") AnnotationAssertion( "XAO:0003063") AnnotationAssertion( "ZFA:0000407") AnnotationAssertion(Annotation( ) "skeletal parts of pectoral girdle") AnnotationAssertion(Annotation( ) "skeleton of pectoral girdle") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "cingulum pectorale") AnnotationAssertion(Annotation( "VSAO:0000156") Annotation( ) "pectoral girdle") AnnotationAssertion(Annotation( "TAO:0000407") "scapular girdle") AnnotationAssertion( "UBERON:0007831") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "pectoral girdle skeleton") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/2/22/Pectoral_girdle_front_diagram.svg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pelvic girdle skeleton) AnnotationAssertion(Annotation( ) Annotation( "VSAO:0000155") "Skeletal subdivision consisting of a set of bones linking the axial series to the hindlimb zeugopodium and offering anchoring areas for hindlimb and caudal musculature.") AnnotationAssertion( "need to resolve whether this is a paired structure or a single belt (Paired in FMA - implicitly paired in VSAO)") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0000426") Annotation( "AAO"^^xsd:string) Annotation( "AAO:LAP"^^xsd:string) "Anatomical cluster by which the hind limbs are supported and attached to the vertebral column.[AAO]") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0000565") Annotation( "TAO"^^xsd:string) Annotation( "TAO:wd"^^xsd:string) "Anatomical cluster that consists of the paired basipterygia which support the pelvic fin.[TAO]") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "VSAO:0000155") Annotation( "VSAO"^^xsd:string) Annotation( ) "Girdle skeleton consisting of a set of bones linking the axial series to the hindlimb/fin skeleton and offering anchoring areas for hindlimb/fin and caudal musculature.[VSAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000305") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0072528305 Kardong KV, Vertebrates: Comparative Anatomy, Function, Evolution (2006) p.333") "The pelvic girdle is never joined by contributions of dermal bone. From its first appearance in placoderms, the pelvic girdle is exclusively endoskeletal. It arose from pterygiophores, perhaps several times, in support of the fin.[well established][VHOG]") AnnotationAssertion(Annotation( "VSAO") "Note that the VSAO and many ontologies use the label 'pelvic girdle' to denote the skeletal region specifically. We place the EHDAA2 class here, note that this includes the pre-cartilage condensation as parts") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0000426") AnnotationAssertion( "AAO:0000768") AnnotationAssertion( "EFO:0000947") AnnotationAssertion( "EHDAA2:0001426") AnnotationAssertion( "EHDAA:7149") AnnotationAssertion( "EHDAA:8324") AnnotationAssertion( "EMAPA:18028") AnnotationAssertion( "FMA:87592") AnnotationAssertion( "MAT:0000182") AnnotationAssertion( "MIAA:0000182") AnnotationAssertion( "TAO:0000565") AnnotationAssertion( "VHOG:0000305") AnnotationAssertion( "VSAO:0000155") AnnotationAssertion( "XAO:0003064") AnnotationAssertion( "ZFA:0000565") AnnotationAssertion( "galen:PelvicGirdle") AnnotationAssertion(Annotation( "VSAO:0000155") "pelvic girdle skeleton") AnnotationAssertion(Annotation( ) "skeletal parts of pelvic girdle") AnnotationAssertion(Annotation( ) "skeleton of pelvic girdle") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "VSAO:0000155") Annotation( ) "pelvic girdle") AnnotationAssertion( "UBERON:0007832") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "pelvic girdle skeleton") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/f/fe/Gray242.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (osseus semicircular canal) AnnotationAssertion(Annotation( "MESH:A09.246.631.663") Annotation( "MGI:cwg"^^xsd:string) Annotation( "MP:0002428") "The organ of balance composed of three long bony tubes of the labyrinth.") AnnotationAssertion( "consider adding FMA:60186 ! Semicircular canal here, as it is part of the bony labyrinth") AnnotationAssertion( "MA:0000250") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "osseous semicircular canal") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007833") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "osseus semicircular canal") SubClassOf( ) SubClassOf(Annotation( "checkme") ) SubClassOf( ) SubClassOf(Annotation( "MA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "MA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (lumbar spinal cord ventral commissure) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A spinal cord ventral commissure that is part of a lumbar spinal cord.") AnnotationAssertion( "BIRNLEX:1326") AnnotationAssertion(Annotation( "BIRNLEX:1326") "lumbar spinal cord anterior commissure") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007834") AnnotationAssertion(rdfs:label "lumbar spinal cord ventral commissure") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (sacral spinal cord ventral commissure) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A spinal cord ventral commissure that is part of a sacral spinal cord.") AnnotationAssertion( "BIRNLEX:1528") AnnotationAssertion(Annotation( "BIRNLEX:1528") "sacral spinal cord anterior commissure") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007835") AnnotationAssertion(rdfs:label "sacral spinal cord ventral commissure") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (cervical spinal cord ventral commissure) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A spinal cord ventral commissure that is part of a cervical spinal cord.") AnnotationAssertion( "BIRNLEX:1552") AnnotationAssertion(Annotation( "BIRNLEX:1552") "cervical spinal cord anterior commissure") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007836") AnnotationAssertion(rdfs:label "cervical spinal cord ventral commissure") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (thoracic spinal cord ventral commissure) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A spinal cord ventral commissure that is part of a thoracic spinal cord.") AnnotationAssertion( "BIRNLEX:1556") AnnotationAssertion(Annotation( "BIRNLEX:1556") "thoracic spinal cord anterior commissure") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007837") AnnotationAssertion(rdfs:label "thoracic spinal cord ventral commissure") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (spinal cord white commissure) AnnotationAssertion( ) AnnotationAssertion( "FMA:77033") AnnotationAssertion(Annotation( "FMA:77033") "white commissure of spinal cord") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007838") AnnotationAssertion(rdfs:label "spinal cord white commissure") SubClassOf( ) # Class: (spinal cord dorsal white commissure) AnnotationAssertion( ) AnnotationAssertion( "FMA:77034") AnnotationAssertion(Annotation( "FMA:77034") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "commissura alba posterior medullae spinalis") AnnotationAssertion(Annotation( "FMA:77034") "dorsal white commissure of spinal cord") AnnotationAssertion(Annotation( "FMA:77034") "posterior white commissure of spinal cord") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007840") AnnotationAssertion(rdfs:label "spinal cord dorsal white commissure") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (membrane bone) AnnotationAssertion(Annotation( ) Annotation( ) Annotation( "GO_REF:0000034"^^xsd:string) Annotation( "VSAO:0000023") "Bone element that arises as a result of intramembranous ossification.") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "VSAO:0000023") Annotation( "VSAO"^^xsd:string) Annotation( "GO_REF:0000034, http://dx.plos.org/10.1371/journal.pone.0051070") Annotation( "PSPUB:0000170"^^xsd:string) "Bone element that arises as a result of intramembranous ossification.[VSAO]") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0001645") Annotation( "TAO"^^xsd:string) Annotation( "TAO:wd"^^xsd:string) "Intramembranous bone that forms deep in the organism.[TAO]") AnnotationAssertion( "AEO:0000085") AnnotationAssertion( "EHDAA2:0003085") AnnotationAssertion( "TAO:0001645") AnnotationAssertion( "VSAO:0000023") AnnotationAssertion( "XAO:0004014") AnnotationAssertion( "ZFA:0001636") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "ZFA:0001636") Annotation( ) "membrane bones") AnnotationAssertion( "UBERON:0007842") AnnotationAssertion(rdfs:label "membrane bone") SubClassOf(Annotation( "VSAO"^^xsd:string) ) # Class: (uncinate process of ribs) AnnotationAssertion(Annotation( ) Annotation( "ISBN:0073040584"^^xsd:string) Annotation( "PHENOSCAPE:ad"^^xsd:string) "A posterior projection from proximal rib segments. Offers attachment sites for respiratory and shoulder muscles as well as adding structural support to the trunk skeleton[Kardong 2012].") AnnotationAssertion(Annotation( ) ) AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0000741") Annotation( "AAO"^^xsd:string) Annotation( "AAO:Pugener_2002") "Posteriorly directed process (occasionally directed anteriorly) usually associated with the rib (sometimes with the transverse process) of the third vertebra; they provide the origin of the mm serratus superior, medius, and inferior.[AAO]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "AAO:0000741") Annotation( ) "uncinate process") AnnotationAssertion( ) AnnotationAssertion( "AAO:0000741") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007843") AnnotationAssertion(rdfs:comment "WP: Although bony uncinate processes are unique to birds, cartilaginous uncinate processes are present in crocodiles. The uncinate process has also been reported in Sphenodon, Caudipteryx, oviraptorids, Confuciusornis and Chaoyangia however it does not occur in Archaeopteryx") AnnotationAssertion(rdfs:label "uncinate process of ribs") SubClassOf( ) SubClassOf(Annotation( "ISBN:0073040584"^^xsd:string) ObjectSomeValuesFrom( )) DisjointClasses( ) DisjointClasses( ) # Class: (cartilage element) AnnotationAssertion(Annotation( ) Annotation( "GO_REF:0000034"^^xsd:string) Annotation( "PSPUB:0000170"^^xsd:string) Annotation( "VSAO:0000000") "Skeletal element that is composed of cartilage tissue and may be permanent or transient.") AnnotationAssertion(Annotation( "TAO") "TAO still mixes tissue and element") AnnotationAssertion( "AAO:0011130") AnnotationAssertion( "CALOHA:TS-0118") AnnotationAssertion( "EMAPA:32730") AnnotationAssertion( "FMA:55107") AnnotationAssertion( "VSAO:0000000") AnnotationAssertion( "XAO:0004013") AnnotationAssertion( "ZFA:0001501") AnnotationAssertion(Annotation( "FMA:55107") "cartilage organ") AnnotationAssertion(Annotation( ) "cartilaginous element") AnnotationAssertion(Annotation( "VSAO:0000000") "chondrogenic element") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "VSAO:0000000") "cartilage") AnnotationAssertion( "UBERON:0007844") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "cartilage element") SubClassOf(Annotation( "VSAO"^^xsd:string) ) SubClassOf(Annotation( "VSAO"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "VSAO"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (regular connective tissue) AnnotationAssertion(Annotation( "FMA:20103") "Connective tissue, which consists of fibroblasts, the intercellular matrix of which contains a regular network of collagen and elastic fiber bundles. Examples: bone (tissue), cartilage (tissue), dense regular connective tissue.") AnnotationAssertion( "the connective tissue hierarchy largely follows FMA with definitions from VSAO. Note that in FMA, loose-CT is irregular-CT. This means regular-CT is necessarily equivalent to dense-regular-CT (assuming a JEPD classification).") AnnotationAssertion( "FMA:20103") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007845") AnnotationAssertion(rdfs:label "regular connective tissue") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses( ) # Class: (dense regular connective tissue) AnnotationAssertion(Annotation( ) Annotation( "GO_REF:0000034"^^xsd:string) Annotation( "PSPUB:0000170"^^xsd:string) Annotation( "VSAO:0000050") "Connective tissue that is dominated by collagen fibres organized into a definitive pattern (e.g., parallel to one another), with comparatively fewer cells (mostly fibroblasts).") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "VSAO:0000050") Annotation( "VSAO"^^xsd:string) Annotation( "GO_REF:0000034, http://dx.plos.org/10.1371/journal.pone.0051070") Annotation( "PSPUB:0000170"^^xsd:string) "Connective tissue that is dominated by collagen fibres organized into a definitive pattern (e.g., parallel to one another), with comparatively fewer cells (mostly fibroblasts).[VSAO]") AnnotationAssertion(Annotation( "2012-08-29") Annotation( "FMA:64781") Annotation( "FMA") "Regular connective tissue, the intercellular matrix of which consists predominantly of collagen fiber bundles arranged in parallel arrays.[FMA]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:64781") AnnotationAssertion( "NCIT:C33453") AnnotationAssertion(Annotation( "ncithesaurus:Regular_Dense_Connective_Tissue") "UMLS:C0225333") AnnotationAssertion( "VSAO:0000050") AnnotationAssertion( "XAO:0004030") AnnotationAssertion(Annotation( "FMA:64781") "dense fibrous connective tissue") AnnotationAssertion(Annotation( "FMA:64781") "dense regular collagenous connective tissue") AnnotationAssertion(Annotation( "FMA:64781") "dense regular collagenous tissue") AnnotationAssertion( "regular dense connective tissue") AnnotationAssertion(Annotation( "FMA:64781") "typus regularis (textus connectivus collagenosus compactus)") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007846") AnnotationAssertion(rdfs:label "dense regular connective tissue") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf(Annotation( "ncithesaurus"^^xsd:string) ) # Class: (perichordal tissue) AnnotationAssertion(Annotation( ) Annotation( "GO_REF:0000034"^^xsd:string) Annotation( "PSPUB:0000170"^^xsd:string) Annotation( "VSAO:0000054") "Fibrous connective tissue that surrounds the notochord; includes a layer of elastin.") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0001642") Annotation( "TAO"^^xsd:string) Annotation( "TAO:wd"^^xsd:string) "Portion of connective tissue which surrounds the notochord.[TAO]") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "VSAO:0000054") Annotation( "VSAO"^^xsd:string) "relationship type change: part_of notochord (VSAO:0000032) CHANGED TO: surrounds notochord (UBERON:0002328)[VSAO]") AnnotationAssertion( "AAO:0000737") AnnotationAssertion( "AAO:0010446") AnnotationAssertion( "TAO:0001642") AnnotationAssertion( "VSAO:0000054") AnnotationAssertion( "XAO:0004050") AnnotationAssertion( "ZFA:0001633") AnnotationAssertion(Annotation( "ZFA:0001633") "perichordal connective tissue") AnnotationAssertion(Annotation( "VSAO:curator"^^xsd:string) "perichordal sheath") AnnotationAssertion(Annotation( "VSAO:curator"^^xsd:string) "perichordal sheath tissue") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "VSAO:curator"^^xsd:string) "notochord") AnnotationAssertion(Annotation( "ISBN:0073040584"^^xsd:string) "perichordal tube") AnnotationAssertion( "UBERON:0007862") AnnotationAssertion(rdfs:comment "Derived from cells surrounding the notochord (possibly the slerotome). Disparate from (not derived from) notochord.") AnnotationAssertion(rdfs:label "perichordal tissue") SubClassOf(Annotation( "VSAO"^^xsd:string) ) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "VSAO-modified") ObjectSomeValuesFrom( )) SubClassOf(Annotation( "ISBN:0073040584"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (bone of craniocervical region) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A bone that is part of a craniocervical region.") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37245") AnnotationAssertion( "MA:0000569") AnnotationAssertion(Annotation( "MA:0000569") "head or neck bone") AnnotationAssertion( "uberon") AnnotationAssertion( "cranial bone") AnnotationAssertion( "UBERON:0007914") AnnotationAssertion(rdfs:label "bone of craniocervical region") SubClassOf(Annotation( "MA"^^xsd:string) ) SubClassOf(Annotation( "MA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (central carpal bone) AnnotationAssertion(Annotation( ) "A small bone occasionally found at the dorsal aspect of the wrist between the scaphoid, capitate, and trapezoid; it is developed as an independent cartilage in early foetal life but usually becomes fused with the scaphoid; it occurs normally in most monkeys.") AnnotationAssertion(Annotation( ) "central bone") AnnotationAssertion(Annotation( "MA:0001344") "centrale") AnnotationAssertion( "os centrale") AnnotationAssertion( ) AnnotationAssertion( "FMA:321692") AnnotationAssertion( "MA:0001344") AnnotationAssertion( "central carpals") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "os carpi centrale") AnnotationAssertion( "os centrale carpi") AnnotationAssertion( "UBERON:0007958") AnnotationAssertion(rdfs:label "central carpal bone") SubClassOf(Annotation( "MA"^^xsd:string) ) SubClassOf( ) # Class: (falciform carpal bone) AnnotationAssertion( "TODO - check relationship to radial sesamoid") AnnotationAssertion( "EMAPA:36171") AnnotationAssertion( "MA:0001345") AnnotationAssertion(Annotation( ) "os falciform") AnnotationAssertion(Annotation( ) "os falciforme") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007959") AnnotationAssertion(rdfs:label "falciform carpal bone") SubClassOf(Annotation( "MA"^^xsd:string) ) # Class: (scapholunate) AnnotationAssertion(Annotation( ) "The combined scaphoid and lunate bones.") AnnotationAssertion(Annotation( "WP"^^xsd:string) "present in mouse[based on MA], carnivora[Websters] and macropods") AnnotationAssertion( "EMAPA:36166") AnnotationAssertion( "MA:0001346") AnnotationAssertion(Annotation( ) "scapholunate bone") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "MA:0001346") "intermedioradial carpal bone") AnnotationAssertion(Annotation( ) "scapholunatum") AnnotationAssertion( "UBERON:0007960") AnnotationAssertion(rdfs:label "scapholunate") SubClassOf(Annotation( "MA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (proximal sesamoid bone of pes) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37728") AnnotationAssertion( "MA:0001376") AnnotationAssertion(Annotation( "MA:0001376") "proximal sesamoid bone of foot") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007990") AnnotationAssertion(rdfs:label "proximal sesamoid bone of pes") SubClassOf( ) SubClassOf( ) # Class: (proximal sesamoid bone of manus) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37729") AnnotationAssertion( "MA:0001377") AnnotationAssertion(Annotation( "MA:0001377") "proximal sesamoid bone of hand") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007991") AnnotationAssertion(rdfs:label "proximal sesamoid bone of manus") SubClassOf( ) SubClassOf( ) # Class: (ulnar sesamoid bone) AnnotationAssertion( "compare with pisiform") AnnotationAssertion( "EMAPA:36621") AnnotationAssertion( "MA:0001379") AnnotationAssertion( "ulnar sesamoid") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007993") AnnotationAssertion(rdfs:label "ulnar sesamoid bone") SubClassOf(Annotation( "MA"^^xsd:string) ) SubClassOf( ) SubClassOf( ) # Class: (sesamoid bone of manus) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A sesamoid bone that is part of a manus.") AnnotationAssertion( ) AnnotationAssertion( "FMA:42353") AnnotationAssertion(Annotation( "FMA:42353") "sesamoid bone of hand") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0007997") AnnotationAssertion(rdfs:label "sesamoid bone of manus") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ) SubClassOf( ) # Class: (sesamoid bone of pes) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A sesamoid bone that is part of a pes.") AnnotationAssertion( ) AnnotationAssertion( "FMA:45096") AnnotationAssertion(Annotation( "FMA:45096") "sesamoid bone of foot") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0008000") AnnotationAssertion(rdfs:label "sesamoid bone of pes") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ) SubClassOf( ) # Class: (irregular bone) AnnotationAssertion(Annotation( ) "The irregular bones are bones which, from their peculiar form, cannot be grouped as long bone, short bone, flat bone or sesamoid bone. Irregular bones serve various purposes in the body, such as protection of nervous tissue, affording multiple anchor points for skeletal muscle attachment (as with the sacrum), and maintaining pharynx and trachea support, and tongue attachment (such as the hyoid bone). They consist of cancellous tissue enclosed within a thin layer of compact bone. The irregular bones are: the vertebrC&, sacrum, coccyx, temporal, sphenoid, ethmoid, zygomatic, maxilla, mandible, palatine, inferior nasal concha, and hyoid.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:7477") AnnotationAssertion( "NCIT:C32881") AnnotationAssertion(Annotation( "ncithesaurus:Irregular_Bone") "UMLS:C0502414") AnnotationAssertion( "os irregulare") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "os irregulare") AnnotationAssertion( "UBERON:0008001") AnnotationAssertion(rdfs:label "irregular bone") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (joint of girdle) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A skeletal joint that is part of a appendage girdle region.") AnnotationAssertion( "MA:0001505") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "girdle joint") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0008114") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "joint of girdle") SubClassOf(Annotation( "MA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (surface of cartilage) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An anatomical surface that is part of a cartilage element.") AnnotationAssertion( "FMA:76668") AnnotationAssertion(Annotation( "FMA:76668") "cartilage surface") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0008115") AnnotationAssertion(rdfs:label "surface of cartilage") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (joint articular surface) AnnotationAssertion(Annotation( "FMA"^^xsd:string) "FMA has multiple 'Articular surface of X' classes, with no way to group them") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37620") AnnotationAssertion( "MA:0001518") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0008124") AnnotationAssertion(rdfs:label "joint articular surface") SubClassOf( ) SubClassOf(Annotation( "MA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (hypertrophic cartilage zone) AnnotationAssertion( "EMAPA:35415") AnnotationAssertion( "MA:0002849") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0008187") AnnotationAssertion(rdfs:comment "see also VSAO:0000098") AnnotationAssertion(rdfs:label "hypertrophic cartilage zone") SubClassOf( ) SubClassOf(Annotation( "MA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (tendon of biceps brachii) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A tendon that attaches_to a biceps brachii.") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:25053") AnnotationAssertion( "FMA:38152") AnnotationAssertion(Annotation( "FMA:38152") "biceps brachii tendon") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:38152") "tendon of biceps brachii muscle") AnnotationAssertion( "UBERON:0008188") AnnotationAssertion(rdfs:label "tendon of biceps brachii") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (tendon of triceps brachii) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A tendon that attaches_to a triceps brachii.") AnnotationAssertion( ) AnnotationAssertion( "FMA:38380") AnnotationAssertion(Annotation( "FMA:38380") "triceps brachii tendon") AnnotationAssertion( "triceps tendon") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:38380") "tendon of triceps brachii muscle") AnnotationAssertion( "UBERON:0008192") AnnotationAssertion(rdfs:label "tendon of triceps brachii") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pneumatized bone) AnnotationAssertion(Annotation( ) "A bone that is hollow or contains many air cells, such as the mastoid process of the temporal bone[TMD].") AnnotationAssertion( "subclasses of this should be checked for taxonomic consistency") AnnotationAssertion( "Skeletal pneumaticity is the presence of air spaces within bones. Skeletal pneumaticity exists only in synapsids and archosaurs. It is generally produced during development by excavation of bone by pneumatic diverticula (air sacs) from an air-filled space such as the lungs or nasal cavity. Pneumatization is highly variable between individuals, and bones not normally pneumatized can become pneumatized in pathological development. Pneumatization occurs in the skulls of mammals, crocodilians and birds among extant groups, as well as extinct archosaurs including the dinosaurs and pterosaurs. Pneumatic spaces include the paranasal sinuses and some of the mastoid cells[WP]. [Wikipedia:Skeletal_pneumaticity]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:7478") AnnotationAssertion( "galen:PneumaticBone") AnnotationAssertion(Annotation( "FMA:7478") "os pneumaticum") AnnotationAssertion(Annotation( "FMA:7478") "pneumatic bone") AnnotationAssertion( "uberon") AnnotationAssertion( "hollow bone") AnnotationAssertion( "UBERON:0008193") AnnotationAssertion(rdfs:label "pneumatized bone") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (muscle of pectoral girdle) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "Any muscle organ that is part of a pectoral girdle region.") AnnotationAssertion(Annotation( "EMAPA"^^xsd:string) "EMAPA has both non-skeletal and skeletal types, with the non-skeletal also including a chest muscle, so we place the skeletal class here as the most accurate") AnnotationAssertion( "EMAPA:17748") AnnotationAssertion( "FMA:37347") AnnotationAssertion(Annotation( "FMA:37347") "muscle of shoulder girdle") AnnotationAssertion(Annotation( "FMA:37347") "pectoral girdle muscle") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0008196") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "muscle of pectoral girdle") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (nail plate) AnnotationAssertion(Annotation( ) Annotation( ) Annotation( ) "The nail plate is the hard and translucent portion of the nail, composed of keratin.") AnnotationAssertion(Annotation( "FMA"^^xsd:string) "in FMA, the nail is the nail plate") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:35583") AnnotationAssertion( "MA:0002708") AnnotationAssertion( "NCIT:C34216") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "lamina unguis") AnnotationAssertion( "UBERON:0008198") AnnotationAssertion(rdfs:label "nail plate") AnnotationAssertion( "Fingernail:label.jpg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "MA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (chin) AnnotationAssertion(Annotation( ) Annotation( "TAO:0002254") "A subdivision of the face that is the anteriormost part of the lower jaw region.") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0002254") Annotation( "TAO"^^xsd:string) Annotation( "TAO:wd"^^xsd:string) "Surface structure that is the anteriormost region of the lower jaw.[TAO]") AnnotationAssertion( "mental") AnnotationAssertion( "In humans, the chin is the lowermost part of the face. It is formed by the lower front of the mandible. The chin developed as a point of muscular attachment facilitating minute movements of the lips associated with speech. In human evolution, the chin is a cladistic apomorphy, partially defining anatomically modern Humans as distinct from archaic forms") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37827") AnnotationAssertion( "FMA:46495") AnnotationAssertion( "GAID:67") AnnotationAssertion( "MESH:D002680") AnnotationAssertion( "NCIT:C81169") AnnotationAssertion( "TAO:0002254") AnnotationAssertion( "galen:Chin") AnnotationAssertion(Annotation( "FMA:46495") "mental part of face") AnnotationAssertion(Annotation( "FMA:46495") "mental region") AnnotationAssertion(Annotation( "FMA:46495") "mental region of face") AnnotationAssertion(Annotation( "FMA:46495") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "regio mentalis") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "mentum") AnnotationAssertion( "UBERON:0008199") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "chin") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/6/60/Gray1195.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "MESH"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (forehead) AnnotationAssertion(Annotation( ) Annotation( "MESH:A01.456.505.580") "The part of the face above the eyes[MESH]. In human anatomy, the forehead is the fore part of the head. It is, formally, an area of the head bounded by three features, two of the skull and one of the scalp. The top of the forehead is marked by the hairline, the edge of the area where hair on the scalp grows. The bottom of the forehead is marked by the supraorbital ridge, the bone feature of the skull above the eyes. The two sides of the forehead are marked by the temporal ridge, a bone feature that links the supraorbital ridge to the coronal suture line and beyond[WP].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37869") AnnotationAssertion( "FMA:63864") AnnotationAssertion( "GAID:74") AnnotationAssertion( "MESH:D005546") AnnotationAssertion( "NCIT:C89803") AnnotationAssertion(Annotation( "ncithesaurus:Forehead") "UMLS:C0016540") AnnotationAssertion( "galen:Forehead") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "fore head") AnnotationAssertion(Annotation( ) Annotation( ) "sinciput") AnnotationAssertion( "UBERON:0008200") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "forehead") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/8/83/Forhead_01_ies.jpg"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (bone of hip region) AnnotationAssertion( "todo - consider obsoletion") AnnotationAssertion(Annotation( "MA"^^xsd:string) "in MA, this includes the femur. i.e. pelvic girdle bone or femur; note that this makes the ilium etc in MA hindlimb bones. in MA this is a hindlimb bone") AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37308") AnnotationAssertion( "FMA:42854") AnnotationAssertion( "MA:0000655") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0008202") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "bone of hip region") SubClassOf( ) SubClassOf(Annotation( "MA"^^xsd:string) ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) # Class: (pelvic cavity) AnnotationAssertion(Annotation( "UBERON:cjm"^^xsd:string) "The part of the ventral body cavity that is within the pelvis.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37235") AnnotationAssertion( "FMA:9738") AnnotationAssertion( "MA:0003089") AnnotationAssertion(Annotation( "FMA:9738") "space of pelvic compartment") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "cavitas pelvis") AnnotationAssertion( "UBERON:0008203") AnnotationAssertion(rdfs:label "pelvic cavity") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/e/ee/Scheme_body_cavities-en.svg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (craniocervical region musculature) AnnotationAssertion(Annotation( "ZFA:0000328") Annotation( "ZFA:curator") "Musculature system of the pharyngeal and head regions.") AnnotationAssertion(Annotation( "MA"^^xsd:string) "in MA this is restricted to skeletal muscles") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37259") AnnotationAssertion( "MA:0000571") AnnotationAssertion( "TAO:0000328") AnnotationAssertion( "ZFA:0000328") AnnotationAssertion(Annotation( "MA:0000571") "head or neck muscle") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "ZFA:0000328") "head muscles") AnnotationAssertion(Annotation( "MA:0000571") "head or neck muscle") AnnotationAssertion( "UBERON:0008229") AnnotationAssertion(rdfs:label "craniocervical region musculature") SubClassOf(Annotation( "MA"^^xsd:string) ) SubClassOf(Annotation( "MA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (tibialis) AnnotationAssertion(Annotation( "Fast_Health_Medical_Dictionary:http://www.fasthealth.com/dictionary/") "Either of two muscles of the calf of the leg.") AnnotationAssertion( ) AnnotationAssertion( "BTO:0000864") AnnotationAssertion( "EMAPA:35867") AnnotationAssertion( "MA:0002425") AnnotationAssertion( "NCIT:C53076") AnnotationAssertion(Annotation( "ncithesaurus:Tibialis") "UMLS:C1710422") AnnotationAssertion(Annotation( "MA:0002425") "tibialis muscle") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0008230") AnnotationAssertion(rdfs:label "tibialis") SubClassOf(Annotation( "BTO"^^xsd:string) ) SubClassOf( ) # Class: (dorsal thoracic segment of trunk) AnnotationAssertion(Annotation( "FMA:24217") "Subdivision of thorax, which in humans is the posterior part of the thorax and is demarcated from the chest by the external surface of the posterolateral part of the rib cage and the anterior surface of the thoracic vertebral column; together with the chest, it constitutes the thorax.") AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37234") AnnotationAssertion( "FMA:24217") AnnotationAssertion( "MA:0000028") AnnotationAssertion(Annotation( "FMA:24217") "dorsum of thorax") AnnotationAssertion(Annotation( "FMA:24217") "posterior part of thorax") AnnotationAssertion(Annotation( "FMA:24217") "thoracic back") AnnotationAssertion(Annotation( "FMA:24217") "thoracic part of back") AnnotationAssertion(Annotation( "MA:0000028") "upper back") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:24217") "back of thorax") AnnotationAssertion( "UBERON:0008231") AnnotationAssertion(rdfs:label "dorsal thoracic segment of trunk") SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "MA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (lower back muscle) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A muscle of back that is part of a lower back.") AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37262") AnnotationAssertion( "MA:0000502") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0008242") AnnotationAssertion(rdfs:label "lower back muscle") SubClassOf( ) SubClassOf(Annotation( "MA"^^xsd:string) ) SubClassOf(Annotation( "MA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (upper back muscle) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A muscle of back that is part of a dorsal thoracic segment of trunk.") AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37261") AnnotationAssertion( "MA:0000508") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0008243") AnnotationAssertion(rdfs:label "upper back muscle") SubClassOf( ) SubClassOf(Annotation( "MA"^^xsd:string) ) SubClassOf(Annotation( "MA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (pennate muscle) AnnotationAssertion(Annotation( ) "A pennate muscle (also called a penniform muscle) is a muscle with fascicles that attach obliquely (in a slanting position) to its tendon. These types of muscles generally allow better stabilization and force production but less flexibility. Individual muscle fibers are formed into bundles of fasciculi and these bundles of fasciculi are formed into bundles of fascicles which compose the entire muscle itself. In a pennate muscle, the fascicles will form an angle with its central tendon. If all the fascicles are on the same side of the tendon, the pennate muscle is called unipennate. Examples of this include certain muscles in the manus. If there are fascicles on both sides of the central tendon, the pennate muscle is called bipennate. The rectus femoris, a large muscle in the quadriceps, is typical. If the central tendon branches within a pennate muscle, the muscle is called multipennate, as seen in the deltoid muscle in the shoulder.") AnnotationAssertion( "TODO add child classes") AnnotationAssertion(Annotation( "FMA"^^xsd:string) "the FMA class does not denote a muscle organ.") AnnotationAssertion( ) AnnotationAssertion( "FMA:74993") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "penniform muscle") AnnotationAssertion( "UBERON:0008245") AnnotationAssertion(rdfs:label "pennate muscle") AnnotationAssertion( "Rectus:femoris.png"^^xsd:anyURI) SubClassOf( ) # Class: (styliform cartilage) AnnotationAssertion(Annotation( ) "A styloform element in a cartilaginous state.") AnnotationAssertion(Annotation( "ISBN:0226313379") "shaft of skeletal tissue that articulates with the lateral border of the carpus.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0008254") AnnotationAssertion(rdfs:label "styliform cartilage") SubClassOf( ) SubClassOf( ) # Class: (right clavicle) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A clavicle that is in the right side of a entire appendicular skeleton.") AnnotationAssertion( "https://github.com/obophenotype/uberon/wiki/Modeling-paired-structures-Design-Pattern"^^xsd:anyURI) AnnotationAssertion( "FMA:13322") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0008255") AnnotationAssertion(rdfs:label "right clavicle") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (left clavicle) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A clavicle that is in the left side of a entire appendicular skeleton.") AnnotationAssertion( "https://github.com/obophenotype/uberon/wiki/Modeling-paired-structures-Design-Pattern"^^xsd:anyURI) AnnotationAssertion( "FMA:13323") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0008256") AnnotationAssertion(rdfs:label "left clavicle") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (radial sesamoid) AnnotationAssertion(Annotation( "ISBN:0226313379") "In the giant panda, a large digitlike preaxial element that articulates with the scapholunatum and the medial border of the first metacarpal.") AnnotationAssertion(Annotation( "ISBN:0226313379") "os sesamoideum radiale") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0008257") AnnotationAssertion(rdfs:label "radial sesamoid") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (echinopluteus larval stage) AnnotationAssertion(Annotation( ) "Larval stage in echinoderms characterized by a planktonic and feeding larval form that possesses limb-like outgrowths bearing ciliated bands.") AnnotationAssertion( "pluteus larval stage") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0008264") AnnotationAssertion(rdfs:label "echinopluteus larval stage") SubClassOf( ) # Class: (periodontal ligament) AnnotationAssertion(Annotation( ) Annotation( ) Annotation( ) Annotation( "BTO:0001020") "The fibrous connective tissue that surrounds the root of a tooth, separating it from and attaching it to the alveolar bone. It extends from the base of the gingival mucosa to the fundus of the bony socket, and its main function is to hold the tooth in its socket[BTO].") AnnotationAssertion(Annotation( ) "The collagen fibers, running from the cementum to the alveolar bone, that suspend a tooth in its socket; they include apical, oblique, horizontal, and alveolar crest fibers, indicating that the orientation of the fibers varies at different levels[http://www.drugs.com/dict/desmodentium.html].") AnnotationAssertion(Annotation( ) "The fibrous connective tissue that surrounds the root of a tooth, separating it from and attaching it to the alveolar bone. It extends from the base of the gingival mucosa to the fundus of the bony socket, and its main function is to hold the tooth in its socket[BTO]. It consist of cells, extracellular compartment of fibers. The cells are fibroblast, epithelial, undifferentiated mesenchymal cells, bone and cementum cells. The extracellular compartment consists of collagen fibers bundles embedded in ground substance. The PDL substance has been estimated to be 70% water and is thought to have a significant effect on the tooth's ability to withstand stress loads[WP][BTO:0001020, Wikipedia:Periodontal_fiber, https://github.com/obophenotype/uberon/issues/21].") AnnotationAssertion(Annotation( "FMA"^^xsd:string) "FMA treats periodontium and periodontal ligament as the same; it has a separate class desmodentium, which we place here even though it is classified as fetal in FMA") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0001020") AnnotationAssertion( "CALOHA:TS-0763") AnnotationAssertion( "EMAPA:35679") AnnotationAssertion( "FMA:56665") AnnotationAssertion( "GAID:1259") AnnotationAssertion( "MA:0002467") AnnotationAssertion(Annotation( ) Annotation( ) "fibra periodontalis") AnnotationAssertion(Annotation( ) Annotation( ) "periodontal fiber") AnnotationAssertion(Annotation( ) Annotation( ) "periodontal fibre") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "PDL") AnnotationAssertion(Annotation( "BTO:0001020") "alveolar periosteum") AnnotationAssertion(Annotation( "BTO:0001020") "alveolodental ligament") AnnotationAssertion(Annotation( "BTO:0001020") "alveolodental membrane") AnnotationAssertion(Annotation( ) Annotation( "BTO:0001020") "desmodontium") AnnotationAssertion(Annotation( "BTO:0001020") "odontoperiosteum") AnnotationAssertion(Annotation( "BTO:0001020") "paradentium") AnnotationAssertion(Annotation( "BTO:0001020") "peridental membrane") AnnotationAssertion(Annotation( ) "peridontal fiber") AnnotationAssertion(Annotation( ) "peridontal fibre") AnnotationAssertion( "peridontal ligament") AnnotationAssertion(Annotation( ) "peridontal ligament fiber") AnnotationAssertion(Annotation( ) "peridontal ligament fibre") AnnotationAssertion(Annotation( "BTO:0001020") "peridontal membrane") AnnotationAssertion(Annotation( "BTO:0001020") "peridontium") AnnotationAssertion(Annotation( "FMA:56665") Annotation( ) "periodontium") AnnotationAssertion( "UBERON:0008266") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "periodontal ligament") AnnotationAssertion(rdfs:seeAlso ) AnnotationAssertion( "The:Periodontium.jpg"^^xsd:anyURI) SubClassOf(Annotation( "FMA-moved") ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "BTO"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (left supracardinal vein) AnnotationAssertion(Annotation( "ISBN:0443065837") "The left thoracic supracardinal vein loses its connection with the left posterior cardinal veins and left sinus horn and subsequently drains into the right supracardinal system.") AnnotationAssertion( ) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0008267") AnnotationAssertion(rdfs:label "left supracardinal vein") SubClassOf( ) # Class: (right supracardinal vein) AnnotationAssertion(Annotation( "ISBN:0443065837") "The right supracardinal vein loses its connection with the posterior cardinal vein and makes a new anastomosis with the segments of the superior vena cava derived from the anterior cardinal vein, becoming the azygos vein.") AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0004539") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0008268") AnnotationAssertion(rdfs:label "right supracardinal vein") SubClassOf( ) # Class: (obsolete cnida) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0008277") AnnotationAssertion(rdfs:comment "See https://github.com/geneontology/go-ontology/issues/13341") AnnotationAssertion(rdfs:label "obsolete cnida") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete nematocyst) AnnotationAssertion(Annotation( ) Annotation( ) "A cnida that is harpoon-like in structure and is capable of penetrating prey.") AnnotationAssertion( "BTO:0000918") AnnotationAssertion(Annotation( ) "penetrant cnida") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0008278") AnnotationAssertion(rdfs:comment "This should be added to GO") AnnotationAssertion(rdfs:label "obsolete nematocyst") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete spirocyst) AnnotationAssertion(Annotation( ) Annotation( ) "A cnida that is adhesive and lasso-like in structure and is capable of being projected at and wrapping around prey.") AnnotationAssertion(Annotation( ) "volvent cnida") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0008279") AnnotationAssertion(rdfs:comment "Will be added to GO or a cnidarian ontology") AnnotationAssertion(rdfs:label "obsolete spirocyst") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (tooth bud) AnnotationAssertion(Annotation( ) Annotation( "UBERON:cjm"^^xsd:string) "A knoblike tooth primordium that develops into the mature tooth and consists of enamel organ, dental papilla, and dental sac enclosing them.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0001838") AnnotationAssertion( "FMA:306006") AnnotationAssertion( "MESH:A14.254.900.720") AnnotationAssertion( "NCIT:C34313") AnnotationAssertion(Annotation( "ncithesaurus:Tooth_Bud") "UMLS:C0040442") AnnotationAssertion(Annotation( "FMA:306006") "dental bud") AnnotationAssertion(Annotation( ) "dental germ") AnnotationAssertion(Annotation( ) "tooth germ") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0008281") AnnotationAssertion(rdfs:label "tooth bud") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete femoral muscle) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0008296") AnnotationAssertion(rdfs:label "obsolete femoral muscle") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (inner chondrogenic layer of perichondrium) AnnotationAssertion(Annotation( ) "The perichondrium consists of two separate layers: an outer fibrous layer and inner chondrogenic layer. The chondrogenic layer remains undifferentiated and can form chondroblasts or chondrocytes.") AnnotationAssertion( ) AnnotationAssertion( "BTO:0005090") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0008304") AnnotationAssertion(rdfs:label "inner chondrogenic layer of perichondrium") SubClassOf( ) SubClassOf(Annotation( "BTO"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (outer fibrous layer of perichondrium) AnnotationAssertion(Annotation( ) "The perichondrium consists of two separate layers: an outer fibrous layer and inner chondrogenic layer. The fibrous layer contains fibroblasts, which produce collagenous fibers.") AnnotationAssertion( ) AnnotationAssertion( "BTO:0005091") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0008305") AnnotationAssertion(rdfs:label "outer fibrous layer of perichondrium") SubClassOf( ) SubClassOf(Annotation( "BTO"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (heart endothelium) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An endothelium that is part of a heart [Automatically generated definition].") AnnotationAssertion( "this class includes any endothelia that are part of the heart. This might include the endocardial epithelia, as well as endothelia of vessels that are considered strictly part of the heart (e.g. outflow tract). As a grouping class, this may lack utility, and pending review this class may be obsoleted. For annotation consider a more specific class.") AnnotationAssertion( "BTO:0004293") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0004293") "cardiac endothelium") AnnotationAssertion( "UBERON:0008307") AnnotationAssertion(rdfs:label "heart endothelium") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (nasopharyngeal gland) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A gland that is part of a nasopharynx.") AnnotationAssertion( ) AnnotationAssertion( "FMA:55076") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0008310") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "nasopharyngeal gland") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (penile bulb artery) AnnotationAssertion(Annotation( ) "A short vessel of large caliber which arises from the internal pudendal between the two layers of fascia of the urogenital diaphragm; it passes medialward, pierces the inferior fascia of the urogenital diaphragm, and gives off branches which ramify in the bulb of the urethra and in the posterior part of the corpus spongiosum. It gives off a small branch to the bulbo-urethral gland.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0005087") AnnotationAssertion( "FMA:20864") AnnotationAssertion(Annotation( "BTO:0005087") "arteria bulbi penis") AnnotationAssertion(Annotation( "FMA:20864") "artery of bulb of penis") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0005087") "bulbourethral artery") AnnotationAssertion( "UBERON:0008311") AnnotationAssertion(rdfs:label "penile bulb artery") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "BTO"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (common penile artery) AnnotationAssertion(Annotation( ) "The artery that serves blood to the penis. It subdivides into three arteries, the bulbourethral artery, the dorsal artery of the penis and the cavernosal artery.") AnnotationAssertion( "TODO - split generic structure from arterial tree") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0005085") AnnotationAssertion( "FMA:66318") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:66318") "artery of penis") AnnotationAssertion(Annotation( "BTO:0005085") "penile artery") AnnotationAssertion( "UBERON:0008320") AnnotationAssertion(rdfs:label "common penile artery") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "BTO"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (deep artery of penis) AnnotationAssertion(Annotation( ) "The deep artery of the penis (artery to the corpus cavernosum), one of the terminal branches of the internal pudendal, arises from that vessel while it is situated between the two fascia of the urogenital diaphragm (deep perineal pouch). It pierces the inferior fascia, and, entering the crus penis obliquely, runs forward in the center of the corpus cavernosum penis, to which its branches are distributed.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0005086") AnnotationAssertion( "FMA:19794") AnnotationAssertion(Annotation( "BTO:0005086") "arteria profunda penis") AnnotationAssertion(Annotation( "FMA:19794") "deep penile artery") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0005086") "arteria cavernosa penis") AnnotationAssertion(Annotation( ) Annotation( ) "arteria profunda penis") AnnotationAssertion(Annotation( "BTO:0005086") "cavernosal artery") AnnotationAssertion( "UBERON:0008321") AnnotationAssertion(rdfs:label "deep artery of penis") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/2/2b/Gray543.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "BTO"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (deep artery of clitoris) AnnotationAssertion(Annotation( ) "The deep artery of clitoris is a branch of the internal pudendal artery.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:20870") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "arteria profunda clitoridis") AnnotationAssertion( "UBERON:0008322") AnnotationAssertion(rdfs:label "deep artery of clitoris") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (dorsal artery of clitoris) AnnotationAssertion(Annotation( ) "The dorsal artery of clitoris is a branch of the internal pudendal artery.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:20867") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0008323") AnnotationAssertion(rdfs:label "dorsal artery of clitoris") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (erectile tissue) AnnotationAssertion(Annotation( ) "With numerous vascular spaces that may become engorged with blood.") AnnotationAssertion( ) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0008324") AnnotationAssertion(rdfs:comment "Examples: corpus cavernosum or penis or clitoris") AnnotationAssertion(rdfs:label "erectile tissue") SubClassOf( ) # Class: (vestibule of vagina) AnnotationAssertion(Annotation( "MGI:anna"^^xsd:string) Annotation( "MP:0011848") "The space posterior to the glans clitoridis, between the labia minora; located within the vestibule are the openings of the vagina, the urethra, and the ducts of the lesser vestibular glands, the greater vestibular (Bartholin's) glands, and the paraurethral (Skene's) glands, which release mucus into the vestibule to maintain a moist, lubricated vestibular environment; the vestibule is also moistened by secretions from the cervical mucus glands located in the inferior region of the uterus.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0003145") AnnotationAssertion( "FMA:19970") AnnotationAssertion(Annotation( "MP:0011848") "vagina vestibule") AnnotationAssertion(Annotation( "FMA:19970") Annotation( "MP:0011848") "vaginal vestibule") AnnotationAssertion(Annotation( "FMA:19970") Annotation( "MP:0011848") "vestibule of vagina") AnnotationAssertion(Annotation( "MP:0011848") "vestibulum pudendi") AnnotationAssertion(Annotation( ) Annotation( "MP:0011848") Annotation( ) "vestibulum vaginae") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:19984") "introitus") AnnotationAssertion(Annotation( "BTO:0003145") "vaginal introitus") AnnotationAssertion(Annotation( "BTO:0003145") "vestibule of vagina") AnnotationAssertion(Annotation( "BTO:0003145") "vestibulum pudendi") AnnotationAssertion( "UBERON:0008330") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "vestibule of vagina") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/f/f3/Scheidenvorhof.jpg"^^xsd:anyURI) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf(Annotation( "BTO"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (clitoral smooth muscle) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A smooth muscle tissue that is part of a clitoris.") AnnotationAssertion( "BTO:0005000") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0005000") "clitoris smooth muscle") AnnotationAssertion( "UBERON:0008331") AnnotationAssertion(rdfs:label "clitoral smooth muscle") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (hilum of neuraxis) AnnotationAssertion( "FMA:83871") AnnotationAssertion(Annotation( "FMA:83871") "neuraxis hilum") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0008332") AnnotationAssertion(rdfs:label "hilum of neuraxis") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (hilum of inferior olivary complex) AnnotationAssertion(Annotation( "Dorlands_Medical_Dictionary:MerckSource") "The white core of the inferior olivary nucleus of the medulla oblongata, most prominent medially.") AnnotationAssertion( ) AnnotationAssertion( "BAMS:hio") AnnotationAssertion( "BTO:0002300") AnnotationAssertion( "FMA:72612") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) Annotation( ) "hilum nuclei olivaris inferioris") AnnotationAssertion(Annotation( "FMA:72612") "hilum of inferior olivary nucleus") AnnotationAssertion(Annotation( "FMA:72612") "inferior olivary hilum") AnnotationAssertion(Annotation( "FMA:72612") "inferior olive hilum") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0002300") "hilum nuclei olivaris caudalis") AnnotationAssertion(Annotation( "BTO:0002300") "hilum of caudal olivary nucleus") AnnotationAssertion(Annotation( "BTO:0002300") "hilum of inferior olivary nucleus") AnnotationAssertion(Annotation( "BAMS:hio") "hilum of inferior olive") AnnotationAssertion( "UBERON:0008333") AnnotationAssertion(rdfs:label "hilum of inferior olivary complex") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf(Annotation( "BTO"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (subarachnoid sulcus) AnnotationAssertion( "FMA:75759") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0008334") AnnotationAssertion(rdfs:label "subarachnoid sulcus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (ventrolateral sulcus of medulla oblongata) AnnotationAssertion(Annotation( "BTO:0002777") "A longitudinal sulcus on the anterior surface of the medulla oblongata, lateral to the pyramid, from which emerge the fibers of the hypoglossal nerve.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:vls") AnnotationAssertion( "BTO:0002777") AnnotationAssertion( "DHBA:12873") AnnotationAssertion( "FMA:83797") AnnotationAssertion(Annotation( "FMA:83797") "anterolateral sulcus of medulla") AnnotationAssertion(Annotation( "FMA:83797") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "sulcus anterolateralis") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) Annotation( ) "sulcus anterolateralis medullae oblongatae") AnnotationAssertion(Annotation( "FMA:83797") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "sulcus ventrolateralis") AnnotationAssertion(Annotation( "FMA:83797") "ventrolateral fissure of medulla") AnnotationAssertion(Annotation( "FMA:83797") "ventrolateral sulcus") AnnotationAssertion(Annotation( "FMA:83797") "ventrolateral sulcus of medulla") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0002777") "anterolateral groove of medulla oblongata") AnnotationAssertion(Annotation( "BTO:0002777") "sulcus anterolateralis medullae oblongatae") AnnotationAssertion(Annotation( "BTO:0002777") "sulcus ventrolateralis medullae spinalis") AnnotationAssertion(Annotation( "BTO:0002777") "ventrolateral sulcus of spinal cord") AnnotationAssertion( "UBERON:0008335") AnnotationAssertion(rdfs:label "ventrolateral sulcus of medulla oblongata") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf(Annotation( "BTO"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (inguinal part of abdomen) AnnotationAssertion(Annotation( "MESH:A01.047.365") "The external junctural region between the lower part of the abdomen and the thigh.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0003358") AnnotationAssertion( "CALOHA:TS-2339") AnnotationAssertion( "EFO:0001397") AnnotationAssertion( "FMA:24040") AnnotationAssertion( "GAID:27") AnnotationAssertion( "MESH:A01.047.365") AnnotationAssertion( "NCIT:C12726") AnnotationAssertion(Annotation( "ncithesaurus:Inguinal_Region") "UMLS:C0018246") AnnotationAssertion( "galen:InguinalRegion") AnnotationAssertion(Annotation( "FMA:24040") "groin") AnnotationAssertion( "groin area") AnnotationAssertion( "groin region") AnnotationAssertion(Annotation( "FMA:24040") "iliac fossa viewed surgically") AnnotationAssertion(Annotation( "FMA:24040") "iliac region") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) Annotation( ) "inguen") AnnotationAssertion(Annotation( "FMA:24040") "inguinal region") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0003358") "iliac region") AnnotationAssertion(Annotation( "BTO:0003358") "inguen") AnnotationAssertion(Annotation( "BTO:0003358") "inguinal region") AnnotationAssertion( "UBERON:0008337") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "inguinal part of abdomen") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (plantar part of pes) AnnotationAssertion(Annotation( ) "The sole is the bottom of the foot.") AnnotationAssertion( "In humans is the sole of the foot anatomically referred to as the plantar aspect. The equivalent surface in ungulates is the hoof") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0005078") AnnotationAssertion( "CALOHA:TS-0379") AnnotationAssertion( "FMA:25000") AnnotationAssertion( "NCIT:C33326") AnnotationAssertion(Annotation( "ncithesaurus:Plantar_Region") "UMLS:C0230463") AnnotationAssertion( "galen:SoleOfFoot") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) Annotation( ) "planta") AnnotationAssertion(Annotation( "FMA:25000") "plantar part of foot") AnnotationAssertion(Annotation( "FMA:25000") "plantar region") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) Annotation( ) "regio plantaris") AnnotationAssertion(Annotation( "FMA:25000") "sole") AnnotationAssertion(Annotation( "FMA:25000") "sole of foot") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "pelma") AnnotationAssertion(Annotation( ) Annotation( ) "planta") AnnotationAssertion(Annotation( ) "sole of foot") AnnotationAssertion(Annotation( ) "sole of the foot") AnnotationAssertion(Annotation( ) "soles of the feet") AnnotationAssertion( "UBERON:0008338") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "plantar part of pes") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/4/41/Soles2.jpg"^^xsd:anyURI) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ) # Class: (microvascular endothelium) AnnotationAssertion( "BTO:0003122") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0008339") AnnotationAssertion(rdfs:label "microvascular endothelium") SubClassOf(Annotation( "BTO"^^xsd:string) ) # Class: (nasal bridge) AnnotationAssertion(Annotation( ) Annotation( ) "A saddle-shaped area that includes the nasal root and the lateral aspects of the nose. It lies between the glabella and the inferior boundary of the nasal bone, and extends laterally to the inner canth[WP].") AnnotationAssertion( ) AnnotationAssertion( "MA:0002874") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0008340") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "nasal bridge") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "MA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (columella nasi) AnnotationAssertion(Annotation( ) "The tissue that links the nasal tip to the nasal base, and separates the nares. It is the inferior margin of the nasal septum[EoM].") AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37832") AnnotationAssertion( "FMA:59725") AnnotationAssertion( "columella of nose") AnnotationAssertion( "nasal columella") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:59725") "columella") AnnotationAssertion( "UBERON:0008341") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "columella nasi") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (intestinal villus of duodenum) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An intestinal villus in the duodenum.") AnnotationAssertion( "FMA:63300") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0008342") AnnotationAssertion(rdfs:label "intestinal villus of duodenum") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (intestinal villus of jejunum) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An intestinal villus in the jejunum.") AnnotationAssertion( "FMA:63301") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0008343") AnnotationAssertion(rdfs:label "intestinal villus of jejunum") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (intestinal villus of ileum) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An intestinal villus in the ileum.") AnnotationAssertion( "FMA:63302") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0008344") AnnotationAssertion(rdfs:label "intestinal villus of ileum") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (ileal epithelium) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An epithelium that is part of a ileum.") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:35423") AnnotationAssertion( "FMA:17233") AnnotationAssertion( "MA:0003217") AnnotationAssertion(Annotation( "FMA:17233") "epithelium of ileum") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0008345") AnnotationAssertion(rdfs:label "ileal epithelium") SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (duodenal epithelium) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An epithelium that is part of a duodenum.") AnnotationAssertion( ) AnnotationAssertion( "CALOHA:TS-2087") AnnotationAssertion( "EMAPA:19078") AnnotationAssertion( "FMA:17231") AnnotationAssertion( "MA:0003208") AnnotationAssertion(Annotation( "FMA:17231") "epithelium of duodenum") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0008346") AnnotationAssertion(rdfs:label "duodenal epithelium") SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (breast epithelium) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An epithelium that is part of a breast.") AnnotationAssertion( "BTO:0001428") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0008367") AnnotationAssertion(rdfs:label "breast epithelium") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (tracheobronchial epithelium) AnnotationAssertion(Annotation( "Dorlands_Medical_Dictionary:MerckMedicus") "Epithelium pertaining to the trachea and bronchi.") AnnotationAssertion( "BTO:0002925") AnnotationAssertion( "CALOHA:TS-1063") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0002925") "bronchotracheal epithelium") AnnotationAssertion( "UBERON:0008397") AnnotationAssertion(rdfs:label "tracheobronchial epithelium") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (proximal tubular epithelium) AnnotationAssertion(Annotation( "Renal_Physiology:Section_7") Annotation( "_Chapter_3") "The cells lining the proximal tubule are cuboidal epithelial cells with deep basal membrane invaginations that provide a large basal surface area. The long microvilli (the brush border) lining the tubule lumen, maximize luminal surface area and make these cells ideally suited for both reabsorptive and secretory functions.") AnnotationAssertion( "See https://github.com/obophenotype/uberon/issues/1305") AnnotationAssertion( "BTO:0003576") AnnotationAssertion( "FMA:64808") AnnotationAssertion(Annotation( "FMA:64808") "epithelium of proximal convoluted tubule") AnnotationAssertion(Annotation( "FMA:64808") "epithelium of proximal renal tubule") AnnotationAssertion(Annotation( "FMA:64808") "proximal renal tubule epithelium") AnnotationAssertion(Annotation( "BTO:0003576") "proximale tubular epithelium") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0003576") "proximal tubule epithelium") AnnotationAssertion( "UBERON:0008404") AnnotationAssertion(rdfs:label "proximal tubular epithelium") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (distal tubular epithelium) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An epithelium that is part of a distal tubule.") AnnotationAssertion( "See https://github.com/obophenotype/uberon/issues/1305") AnnotationAssertion( "BTO:0003948") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0003948") "distal tubule epithelium") AnnotationAssertion( "UBERON:0008408") AnnotationAssertion(rdfs:label "distal tubular epithelium") SubClassOf( ) SubClassOf(Annotation( "BTO"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (buccal epithelium) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An epithelium that is part of a buccal mucosa.") AnnotationAssertion( "BTO:0004803") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0008420") AnnotationAssertion(rdfs:label "buccal epithelium") SubClassOf( ) SubClassOf(Annotation( "BTO"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (inguinal mammary gland) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A mammary gland that is part of a inguinal part of abdomen.") AnnotationAssertion( ) AnnotationAssertion( "MA:0000790") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0008424") AnnotationAssertion(rdfs:label "inguinal mammary gland") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (mammary ridge) AnnotationAssertion(Annotation( "GOC:dph") "A ridge of epidermal cells that will form the mammary placodes.") AnnotationAssertion( "consider splitting ridge (precursor) and milk line") AnnotationAssertion( "These buds are either located in the thoracic region in primates, in the inguinal area in ungulates or along the entire length of the trunk in rodents and pigs. In humans, milk lines appear in the seventh week of embryonic development") AnnotationAssertion( "The first manifestation of the mammary gland in many mammals is an elevated ridge or milk line, which then fragments into individual buds in specific regions lateral of the dorsal midline. After initial development of the milk lines they go into remission.") AnnotationAssertion( "in mouse, mammary gland development begins shortly after mid-gestation (about E10.5); epidermal cells within the milk line become columnar and multilayered, defining a ridge that protrudes above and below the plane of the single-layered primitive epidermis or periderm; by E11.5, five pairs of lens-shaped placodes form along the mammary line at the site of each future nipple.[MP]") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:18541") AnnotationAssertion(Annotation( ) "mammary fold") AnnotationAssertion(Annotation( "EMAPA:18541") "mammary gland ridge") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "mammary line") AnnotationAssertion(Annotation( ) "milk line") AnnotationAssertion( "UBERON:0008425") AnnotationAssertion(rdfs:label "mammary ridge") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (transverse foramen of atlas) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A transverse foramen that is part of a vertebral bone 1.") AnnotationAssertion( ) AnnotationAssertion( "FMA:23998") AnnotationAssertion(Annotation( "FMA:23998") "foramen transversarium of atlas") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0008426") AnnotationAssertion(rdfs:label "transverse foramen of atlas") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (transverse foramen of axis) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A transverse foramen that is part of a vertebral bone 2.") AnnotationAssertion( ) AnnotationAssertion( "FMA:23999") AnnotationAssertion(Annotation( "FMA:23999") "foramen transversarium of axis") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0008427") AnnotationAssertion(rdfs:label "transverse foramen of axis") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA-abduced-lr"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (ceratoglossus) AnnotationAssertion(Annotation( ) "Main, posterior part of hyoglossus muscle (vs. chondroglossus) arising from the greater horn of the hyoid bone.") AnnotationAssertion( "FMA:46720") AnnotationAssertion(Annotation( ) "ceratoglossus muscle") AnnotationAssertion(Annotation( ) "musculus ceratoglossus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0008428") AnnotationAssertion(rdfs:label "ceratoglossus") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (cervical vertebral foramen) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A vertebral foramen that is part of a cervical vertebra.") AnnotationAssertion( ) AnnotationAssertion( "FMA:13480") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0008429") AnnotationAssertion(rdfs:label "cervical vertebral foramen") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lumbar vertebral foramen) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A vertebral foramen that is part of a lumbar vertebra.") AnnotationAssertion( ) AnnotationAssertion( "FMA:24826") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0008430") AnnotationAssertion(rdfs:label "lumbar vertebral foramen") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (sacral foramen) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A vertebral foramen that is part of a sacral vertebra.") AnnotationAssertion( "FMA:31749") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0008431") AnnotationAssertion(rdfs:label "sacral foramen") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (thoracic vertebral foramen) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A vertebral foramen that is part of a thoracic vertebra.") AnnotationAssertion( ) AnnotationAssertion( "FMA:9143") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0008432") AnnotationAssertion(rdfs:label "thoracic vertebral foramen") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lumbar vertebral arch) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A neural arch that is part of a lumbar vertebra.") AnnotationAssertion( ) AnnotationAssertion( "FMA:16076") AnnotationAssertion(Annotation( "FMA:16076") "arch of lumbar vertebra") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0008433") AnnotationAssertion(rdfs:label "lumbar vertebral arch") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (cervical vertebral arch) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A neural arch that is part of a cervical vertebra.") AnnotationAssertion( ) AnnotationAssertion( "FMA:23893") AnnotationAssertion(Annotation( "FMA:23893") "arch of cervical vertebra") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0008434") AnnotationAssertion(rdfs:label "cervical vertebral arch") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (vertebral arch of sacral segment) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A neural arch that is part of a sacral vertebra.") AnnotationAssertion( "FMA:32401") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0008435") AnnotationAssertion(rdfs:label "vertebral arch of sacral segment") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (thoracic vertebral arch) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A neural arch that is part of a thoracic vertebra.") AnnotationAssertion( ) AnnotationAssertion( "FMA:9151") AnnotationAssertion(Annotation( "FMA:9151") "arch of thoracic vertebra") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0008436") AnnotationAssertion(rdfs:label "thoracic vertebral arch") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (posterior arch of atlas) AnnotationAssertion(Annotation( ) "In a cervical vertebra, the posterior arch forms about two-fifths of the circumference of the ring: it ends behind in the posterior tubercle, which is the rudiment of a spinous process and gives origin to the Recti capitis posteriores minores.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:23977") AnnotationAssertion(Annotation( "FMA:23977") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "arcus posterior atlantis") AnnotationAssertion( "uberon") AnnotationAssertion( "arcus posterior") AnnotationAssertion(Annotation( ) "posterior arch") AnnotationAssertion( "UBERON:0008437") AnnotationAssertion(rdfs:label "posterior arch of atlas") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/6/6b/Arcusposterioratlantis.png"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (webbed interdigital region between manual digits) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A webbed interdigital region that is part of a manus.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0008438") AnnotationAssertion(rdfs:label "webbed interdigital region between manual digits") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (webbed interdigital region between pedal digits) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A webbed interdigital region that is part of a pes.") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "toe web") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0008439") AnnotationAssertion(rdfs:label "webbed interdigital region between pedal digits") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (webbed autopod) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An autopod region that has_part a webbed interdigital region.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0008440") AnnotationAssertion(rdfs:label "webbed autopod") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (webbed manus) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A manus that has_part a webbed interdigital region.") AnnotationAssertion( "AAO:0010120") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "AAO:0010120") "hand webbing") AnnotationAssertion( "webbed hand") AnnotationAssertion( "UBERON:0008441") AnnotationAssertion(rdfs:label "webbed manus") SubClassOf( ) SubClassOf( ) # Class: (webbed pes) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A pes that has_part a webbed interdigital region.") AnnotationAssertion( "AAO:0010121") AnnotationAssertion( "webbed foot") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "AAO:0010121") "foot webbing") AnnotationAssertion( "UBERON:0008442") AnnotationAssertion(rdfs:label "webbed pes") SubClassOf( ) SubClassOf( ) # Class: (webbed digit) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A digit that is part of a webbed autopod.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0008443") AnnotationAssertion(rdfs:label "webbed digit") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (webbed manual digit) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A digit that is part of a webbed manus.") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "digit of webbed hand") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "digit of webbed manus") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "webbed finger") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0008444") AnnotationAssertion(rdfs:label "webbed manual digit") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (webbed pedal digit) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A digit that is part of a webbed pes.") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "digit of webbed foot") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "digit of webbed pes") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "webbed toe") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0008445") AnnotationAssertion(rdfs:label "webbed pedal digit") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (flexor pollicis longus muscle) AnnotationAssertion(Annotation( ) "A muscle in the forearm and hand that flexes the thumb. It lies in the same plane as the flexor digitorum profundus.") AnnotationAssertion(Annotation( "WP"^^xsd:string) "Modern humans are unique among hominids in having a flexor pollicis longus (FPL) muscle belly that is separate from that of the flexor digitorum profundus (FDP). While the FPL is not a separate muscle belly in extant great apes, a distinct tendon from the FDP belly might be present. In some individuals this tendon tend to act more like a ligament which restricts extension of the interphalangeal joint of the thumb. In orangutans there is a tendon similar in insertion and function to the FPL in humans, but which has an intrinsic origin on the oblique head of the adductor pollicis") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:38481") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "flexor pollicis") AnnotationAssertion(Annotation( ) "flexor pollicis longus") AnnotationAssertion(Annotation( ) "flexor pollicis muscle") AnnotationAssertion(Annotation( ) "musculus flexor pollicis longus") AnnotationAssertion(Annotation( ) Annotation( ) "musculus flexor pollicis longus") AnnotationAssertion( "UBERON:0008446") AnnotationAssertion(rdfs:label "flexor pollicis longus muscle") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/7/72/FPL.png"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "The middle 2/4 of the volar surface of the radius and the adjacent interosseus membrane.") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "The base of the distal phalanx of the thumb") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (intertarsal joint) AnnotationAssertion(Annotation( ) "Intertarsal articulations are the joints of the tarsus. The specific intertarsal articulations are: Talocalcaneal articulation Talocalcaneonavicular articulation Calcaneocuboid articulation Cuneonavicular articulation Cuboideonavicular articulation Intercuneiform articulation Cuneocuboid articulation.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37762") AnnotationAssertion( "FMA:44281") AnnotationAssertion( "GAID:259") AnnotationAssertion( "MA:0003112") AnnotationAssertion( "MESH:D013640") AnnotationAssertion( "NCIT:C33735") AnnotationAssertion(Annotation( "ncithesaurus:Tarsal_Joint") "UMLS:C1527245") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "MESH:A02.835.583.378.831") "articulationes intertarsale") AnnotationAssertion(Annotation( ) Annotation( ) "articulationes intertarsales") AnnotationAssertion(Annotation( "MESH:A02.835.583.378.831") "articulationes intertarseae") AnnotationAssertion(Annotation( "MESH:A02.835.583.378.831") "intermetatarsal joint") AnnotationAssertion(Annotation( ) "intertarsal") AnnotationAssertion(Annotation( ) "intertarsal articulation") AnnotationAssertion(Annotation( "MESH:A02.835.583.378.831") "intertarsal joint") AnnotationAssertion(Annotation( "MESH:A02.835.583.378.831") "tarsal joint") AnnotationAssertion(Annotation( ) "tarsal joints") AnnotationAssertion( "UBERON:0008447") AnnotationAssertion(rdfs:label "intertarsal joint") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/5/5f/Gray360.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "two adjacent tarsals") ObjectSomeValuesFrom( )) # Class: (trochlear notch) AnnotationAssertion(Annotation( ) "The semilunar notch of the ulna (trochlear notch of ulna, greater sigmoid cavity) is a large depression, formed by the olecranon and the coronoid process, and serving for articulation with the trochlea of the humerus. About the middle of either side of this notch is an indentation, which contracts it somewhat, and indicates the junction of the olecranon and the coronoid process. The notch is concave from above downward, and divided into a medial and a lateral portion by a smooth ridge running from the summit of the olecranon to the tip of the coronoid process. The medial portion is the larger, and is slightly concave transversely; the lateral is convex above, slightly concave below.") AnnotationAssertion( ) AnnotationAssertion( "FMA:23619") AnnotationAssertion(Annotation( "FMA:23619") "semilunar notch of ulna") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "incisura semilunaris ulnae") AnnotationAssertion(Annotation( ) "incisura trochlearis") AnnotationAssertion(Annotation( ) Annotation( ) "incisura trochlearis ulnae") AnnotationAssertion(Annotation( ) "semilunar notch") AnnotationAssertion( "UBERON:0008449") AnnotationAssertion(rdfs:label "trochlear notch") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/6/60/Gray212.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (psoas muscle) AnnotationAssertion(Annotation( ) Annotation( "MESH:A02.633.567.825") "A powerful flexor of the thigh at the hip joint (psoas major) and a weak flexor of the trunk and lumbar spinal column (psoas minor). Psoas is derived from the Greek 'psoa', the plural meaning 'muscles of the loin'. It is a common site of infection manifesting as abscess (PSOAS ABSCESS). The psoas muscles and their fibers are also used frequently in experiments in muscle physiology.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0001140") AnnotationAssertion( "EMAPA:36157") AnnotationAssertion( "MA:0002553") AnnotationAssertion( "MESH:D016658") AnnotationAssertion( "NCIT:C33422") AnnotationAssertion(Annotation( "ncithesaurus:Psoas_Muscle") "UMLS:C0085221") AnnotationAssertion( "galen:Psoas") AnnotationAssertion(Annotation( "BTO:0001140") "psoas") AnnotationAssertion(Annotation( "MA:0002553") "psoas") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0008450") AnnotationAssertion(rdfs:label "psoas muscle") SubClassOf(Annotation( "FMA-abduced") ) SubClassOf(Annotation( "dbpedia-abduced") ObjectSomeValuesFrom( )) SubClassOf(Annotation( "dbpedia-abduced") ObjectSomeValuesFrom( )) # Class: (rectus capitis anterior) AnnotationAssertion(Annotation( ) "A muscle situated immediately behind the upper part of the Longus capitis that arises from the anterior surface of the lateral mass of the atlas, and from the root of its transverse process that inserts into the inferior surface of the basilar part of the occipital bone immediately in front of the foramen magnum.") AnnotationAssertion( "Flexion of neck at atlanto-occipital joint") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:46312") AnnotationAssertion(Annotation( "FMA:46312") "anterior rectus capitis") AnnotationAssertion(Annotation( ) "rectus capitis anterior muscle") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "anterior rectus capitis muscle") AnnotationAssertion(Annotation( ) "anterior vertebral muscle") AnnotationAssertion(Annotation( ) Annotation( ) "musculus rectus capitis anterior") AnnotationAssertion(Annotation( ) "recti capitis anteriores") AnnotationAssertion(Annotation( ) "rectus capitis") AnnotationAssertion(Annotation( ) "rectus capitis anterior") AnnotationAssertion(Annotation( ) "rectus capitus anterior") AnnotationAssertion(Annotation( ) "rectus capitus anterior muscle") AnnotationAssertion( "UBERON:0008453") AnnotationAssertion(rdfs:label "rectus capitis anterior") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/6/6f/Rectus_capitis_anterior_muscle.PNG"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "basilar part") Annotation( "Wikipedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (rectus capitis posterior major) AnnotationAssertion(Annotation( ) "A muscle that arises by a pointed tendon from the spinous process of the axis and inserts into the lateral part of the inferior nuchal line of the occipital bone and the surface of the bone immediately below the line.") AnnotationAssertion( "extend and rotate the atlanto-occipital joint") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:32525") AnnotationAssertion(Annotation( "FMA:32525") "greater posterior rectus capitis") AnnotationAssertion(Annotation( ) "rectus capitis posterior major muscle") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "musculus rectus capitis posterior major") AnnotationAssertion(Annotation( ) "recti capitis posteriores major") AnnotationAssertion(Annotation( ) "rectus capitis posterior major") AnnotationAssertion(Annotation( ) "rectus capitus posterior major") AnnotationAssertion(Annotation( ) "rectus capitus posterior major muscle") AnnotationAssertion(Annotation( ) "rectus posterior major") AnnotationAssertion( "UBERON:0008454") AnnotationAssertion(rdfs:label "rectus capitis posterior major") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/d/dd/Rectus_capitis_posterior_major_muscle.PNG"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf(Annotation( "Dorsal ramus of C1") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "Spinous process of the axis") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "Inferior nuchal line of the occipital bone") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (rectus capitis posterior minor) AnnotationAssertion(Annotation( ) "A muscle that arise from the tubercle on the posterior arch of the and is inserted into the medial part of the inferior nuchal line of the occipital bone and the surface between it and the foramen magnum, and also takes some attachment to the spinal dura.") AnnotationAssertion( "extends the head at the neck") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:32526") AnnotationAssertion(Annotation( "FMA:32526") "lesser posterior rectus capitis") AnnotationAssertion(Annotation( ) "rectus capitis posterior minor muscle") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "musculus rectus capitis posterior minor") AnnotationAssertion(Annotation( ) "recti capitis posteriores minores") AnnotationAssertion(Annotation( ) "rectus capitis posterior minor") AnnotationAssertion(Annotation( ) "rectus capitus posterior minor") AnnotationAssertion(Annotation( ) "rectus capitus posterior minor muscle") AnnotationAssertion(Annotation( ) "rectus posterior minor") AnnotationAssertion( "UBERON:0008455") AnnotationAssertion(rdfs:label "rectus capitis posterior minor") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/e/ed/Rectus_capitis_posterior_minor.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf(Annotation( "suboccpital nerve") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "the tubercle on the posterior arch of the atlas") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "the medial part of the inferior nuchal line of the occipital bone and the surface between it and the foramen magnum") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (prezygapophysis of lumbar vertebra) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A prezygapophysis that is part of a lumbar vertebra.") AnnotationAssertion( ) AnnotationAssertion( "FMA:16126") AnnotationAssertion(Annotation( "FMA:16126") "cranial articular process of lumbar vertebra") AnnotationAssertion(Annotation( "FMA:16126") Annotation( ) "superior articular process of lumbar vertebra") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0008456") AnnotationAssertion(rdfs:label "prezygapophysis of lumbar vertebra") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (prezygapophysis of sacral vertebra) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A prezygapophysis that is part of a sacral vertebra.") AnnotationAssertion( "FMA:16215") AnnotationAssertion(Annotation( "FMA:16215") "articular process of sacral segment") AnnotationAssertion(Annotation( "FMA:16215") "processus articularis superior (os sacrum)") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) Annotation( ) "processus articularis superior ossis sacri") AnnotationAssertion(Annotation( "FMA:16215") "superior articular process of sacral segment") AnnotationAssertion(Annotation( "FMA:16215") Annotation( ) "superior articular process of sacral vertebra") AnnotationAssertion(Annotation( "FMA:16215") "superior articular process of sacrum") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0008457") AnnotationAssertion(rdfs:label "prezygapophysis of sacral vertebra") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (prezygapophysis of cervical vertebra) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A prezygapophysis that is part of a cervical vertebra.") AnnotationAssertion( ) AnnotationAssertion( "FMA:23969") AnnotationAssertion( "superior articular process of cervical segment") AnnotationAssertion(Annotation( "FMA:23969") Annotation( ) "superior articular process of cervical vertebra") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0008459") AnnotationAssertion(rdfs:label "prezygapophysis of cervical vertebra") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (prezygapophysis of thoracic vertebra) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A prezygapophysis that is part of a thoracic vertebra.") AnnotationAssertion( ) AnnotationAssertion( "FMA:9155") AnnotationAssertion(Annotation( "FMA:9155") "cranial articular process of thoracic vertebra") AnnotationAssertion(Annotation( "FMA:9155") "processus articularis (zygapophysis) thoracicus superior") AnnotationAssertion(Annotation( "FMA:9155") "superior apophyseal process") AnnotationAssertion(Annotation( "FMA:9155") Annotation( ) "superior articular process of thoracic vertebra") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:9155") "superior zygapophysis") AnnotationAssertion( "UBERON:0008460") AnnotationAssertion(rdfs:label "prezygapophysis of thoracic vertebra") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (postzygapophysis of lumbar vertebra) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An postzygapophysis that is part of a lumbar vertebra.") AnnotationAssertion( ) AnnotationAssertion( "FMA:16127") AnnotationAssertion(Annotation( "FMA:16127") "caudal articular process of lumbar vertebra") AnnotationAssertion(Annotation( "FMA:16127") Annotation( ) "inferior articular process of lumbar vertebra") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0008461") AnnotationAssertion(rdfs:label "postzygapophysis of lumbar vertebra") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (postzygapophysis of cervical vertebra) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An postzygapophysis that is part of a cervical vertebra.") AnnotationAssertion( ) AnnotationAssertion( "FMA:23970") AnnotationAssertion(Annotation( "FMA:23970") Annotation( ) "inferior articular process of cervical vertebra") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0008462") AnnotationAssertion(rdfs:label "postzygapophysis of cervical vertebra") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (postzygapophysis of thoracic vertebra) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An postzygapophysis that is part of a thoracic vertebra.") AnnotationAssertion( ) AnnotationAssertion( "FMA:9156") AnnotationAssertion(Annotation( "FMA:9156") "caudal articular process of thoracic vertebra") AnnotationAssertion(Annotation( "FMA:9156") "inferior apophyseal process") AnnotationAssertion(Annotation( "FMA:9156") Annotation( ) "inferior articular process of thoracic vertebra") AnnotationAssertion(Annotation( "FMA:9156") "inferior zygapophysis") AnnotationAssertion(Annotation( "FMA:9156") "processus articularis (zygapophysis) thoracicus inferior") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0008463") AnnotationAssertion(rdfs:label "postzygapophysis of thoracic vertebra") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (abductor hallucis muscle) AnnotationAssertion(Annotation( ) "The Abductor hallucis lies along the medial border of the pes and covers the origins of the plantar vessels and nerves. It arises from the medial process of the tuberosity of the calcaneus, from the laciniate ligament, from the plantar aponeurosis, and from the intermuscular septum between it and the Flexor digitorum brevis. The fibers end in a tendon, which is inserted, together with the medial tendon of the Flexor hallucis brevis, into the tibial side of the base of the first phalanx of the great toe.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:37448") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "abductor hallucis") AnnotationAssertion(Annotation( ) Annotation( ) "musculus abductor hallucis") AnnotationAssertion( "UBERON:0008464") AnnotationAssertion(rdfs:label "abductor hallucis muscle") AnnotationAssertion( "Abductor:hallucis.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "tuberosity of the calcaneus") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (abductor pollicis brevis muscle) AnnotationAssertion(Annotation( ) "The abductor pollicis brevis is a muscle in the manus that functions as an abductor of the thumb.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:37373") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "abductor brevis") AnnotationAssertion(Annotation( ) "abductor pollicis brevis") AnnotationAssertion(Annotation( ) Annotation( ) "musculus abductor pollicis brevis") AnnotationAssertion( "UBERON:0008465") AnnotationAssertion(rdfs:label "abductor pollicis brevis muscle") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/7/77/Musculusabductorpollicisbrevis.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "Transverse carpal ligament the scaphoid and trapezium") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "Transverse carpal ligament the scaphoid and trapezium") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "Radial base of proximal phalanx of thumb and the thumb extensors") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (cremaster muscle) AnnotationAssertion(Annotation( ) Annotation( "MGI:anna"^^xsd:string) Annotation( "MP:0011833") "A thin layer of skeletal muscle that envelops the spermatic cord and testis of most male mammals in a series of loops; it is a continuation of the obliquus internus, arising from the inguinal ligament and inserting into the crest of the pubis and into the sheath of the rectus abdominis; it is innervated by the genital branch of the genitofemoral nerve and functions to draw the testis up toward the superficial inguinal ring in response to cold or to stimulation of the nerve;.") AnnotationAssertion( "in females it is represented by only a few muscle loops that envelop the round ligament of the uterus. This class represents the male structure") AnnotationAssertion( "cremasteric") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:31250") AnnotationAssertion( "FMA:21531") AnnotationAssertion( "NCIT:C32396") AnnotationAssertion(Annotation( "ncithesaurus:Cremaster_Muscle") "UMLS:C0224377") AnnotationAssertion(Annotation( "FMA:21531") "cremaster") AnnotationAssertion(Annotation( "FMA:21531") "muscle of Riolan (cremaster)") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) Annotation( ) "musculus cremaster ") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "cremaster muscle") AnnotationAssertion(Annotation( ) "cremasteric muscle") AnnotationAssertion( "muscle of Riolan") AnnotationAssertion(Annotation( ) Annotation( ) "musculus cremaster") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) Annotation( ) "musculus cremaster") AnnotationAssertion( "UBERON:0008488") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "cremaster muscle") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/6/67/Gray1143.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (gluteus minimus) AnnotationAssertion(Annotation( ) "The smallest of the three gluteal muscles, situated immediately beneath the gluteus medius.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:36230") AnnotationAssertion( "FMA:22317") AnnotationAssertion( "gluteus minimus muscle") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "glutaeus minimus") AnnotationAssertion(Annotation( ) "gluteus minimus") AnnotationAssertion(Annotation( "EMAPA:36230") "gluteus profundus") AnnotationAssertion(Annotation( ) "glutæus minimus") AnnotationAssertion(Annotation( ) Annotation( ) "musculus gluteus minimus") AnnotationAssertion( "UBERON:0008521") AnnotationAssertion(rdfs:label "gluteus minimus") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/5/55/Posterior_Hip_Muscles_1.PNG"^^xsd:anyURI) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "Gluteal surface of ilium under gluteus medius.") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "Greater trochanter of the femur") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (nasal muscle) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "Any muscle organ that is part of an nose.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:73758") AnnotationAssertion( "NCIT:C33158") AnnotationAssertion(Annotation( "ncithesaurus:Nasal_Muscle") "UMLS:C0224219") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "muscle of nose") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0008522") AnnotationAssertion(rdfs:label "nasal muscle") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (infrahyoid muscle) AnnotationAssertion(Annotation( ) "The infrahyoid muscles are a group of four pairs of muscles in the anterior part of the neck. (The term infrahyoid refers to the region below to the hyoid bone in the neck. ) Collectively, they are referred to as the strap muscles, because the muscles are long and flat much like a strap.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:13338") AnnotationAssertion(Annotation( "FMA:13338") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "musculus infrahyoideus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "infrahyoid") AnnotationAssertion(Annotation( ) "infrahyoid muscle") AnnotationAssertion(Annotation( ) "infrahyoidala") AnnotationAssertion(Annotation( ) Annotation( ) "musculi infrahyoidei") AnnotationAssertion(Annotation( ) "strap muscle") AnnotationAssertion(Annotation( ) "strap muscles") AnnotationAssertion( "UBERON:0008523") AnnotationAssertion(rdfs:label "infrahyoid muscle") AnnotationAssertion( "Infrahyoid:muscles.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (piriformis muscle) AnnotationAssertion(Annotation( ) "The piriformis is a muscle in the gluteal region that originates from the anterior (front) part of the sacrum, the part of the spine in the gluteal region, and from the superior margin of the greater sciatic notch (as well as the sacroiliac joint capsule and the sacrotuberous ligament). It exits the pelvis through the greater sciatic foramen to insert on the greater trochanter of the femur. Its tendon often joins with the tendons of the superior gemellus, inferior gemellus, and obturator internus muscles prior to insertion[WP,modified].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:36239") AnnotationAssertion( "FMA:19082") AnnotationAssertion(Annotation( "FMA:19082") "m.piriformis") AnnotationAssertion(Annotation( "FMA:19082") "piriformis") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "musculus piriformis") AnnotationAssertion(Annotation( ) Annotation( ) "musculus piriformis") AnnotationAssertion(Annotation( ) "piriform muscle") AnnotationAssertion(Annotation( ) "piriformis muscle") AnnotationAssertion( "UBERON:0008529") AnnotationAssertion(rdfs:label "piriformis muscle") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/5/55/Posterior_Hip_Muscles_1.PNG"^^xsd:anyURI) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ) SubClassOf(Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (quadratus femoris) AnnotationAssertion(Annotation( ) "The quadratus femoris is, as its name implies, a flat, quadrilateral skeletal muscle. Located on the posterior side of the hip joint, it is a strong lateral rotator and adductor of the thigh, but also acts to stabilize the femoral head in the Acetabulum.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:36241") AnnotationAssertion( "FMA:22321") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "musculus quadratus femoris") AnnotationAssertion(Annotation( ) "quadratus femoris muscle") AnnotationAssertion( "UBERON:0008537") AnnotationAssertion(rdfs:label "quadratus femoris") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/5/55/Posterior_Hip_Muscles_1.PNG"^^xsd:anyURI) SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (splenius cervicis) AnnotationAssertion(Annotation( ) "A muscle that arises from the spinous processes of the third to the sixth thoracic vertebrae and inserts into the posterior tubercles of the transverse processes of the upper two or three cervical vertebrae[WP,modified].") AnnotationAssertion( "Bilaterally: Extend the head & neck, Unilaterally: Lateral flexion to the same side, Rotation to the same side.") AnnotationAssertion( ) AnnotationAssertion( "FMA:22681") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "musculus splenius cervicis") AnnotationAssertion(Annotation( ) "splenius cervicis muscle") AnnotationAssertion( "UBERON:0008544") AnnotationAssertion(rdfs:label "splenius cervicis") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/2/26/Musculus_splenius_cervicis.PNG"^^xsd:anyURI) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "transverse processes of C1-C3") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (iliocostalis cervicis muscle) AnnotationAssertion(Annotation( ) "The iliocostalis cervicis (cervicalis ascendens) arises from the angles of the third, fourth, fifth, and sixth ribs, and is inserted into the posterior tubercles of the transverse processes of the fourth, fifth, and sixth cervical vertebrae..") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:22704") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "cervicalis ascendens") AnnotationAssertion(Annotation( ) "cervicalis ascendens muscle") AnnotationAssertion(Annotation( ) "iliocostalis cervicis") AnnotationAssertion( "UBERON:0008546") AnnotationAssertion(rdfs:label "iliocostalis cervicis muscle") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (prevertebral muscle) AnnotationAssertion(Annotation( ) "One of the muscles deep to the prevertebral fascia on the anterior surface of the cervical and superior three thoracic vertebrae, symmetrically placed on each side of the median plane, including the longus colli, longus capitis, rectus capitis anterior, and rectus capitis lateralis muscles. innervated by anterior rami of cervical spinal nerves.") AnnotationAssertion( ) AnnotationAssertion( "FMA:32514") AnnotationAssertion(Annotation( "FMA:32514") "flexor muscle of vertebral column") AnnotationAssertion(Annotation( "FMA:32514") "prevertebral muscle") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0008549") AnnotationAssertion(rdfs:comment "some authorities define the group as medial to the plane of the cervicobrachial plexus, and thus also include the anterior scalene muscle. Action notes: flexors of the head and neck") AnnotationAssertion(rdfs:label "prevertebral muscle") AnnotationAssertion( "Prevertebral:muscles.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (suprahyoid muscle) AnnotationAssertion(Annotation( ) "A muscle in the region above the hyoid bone in the neck. The suprahyoid muscles include digastric, stylohyoid, geniohyoid, and mylohyoid.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:46290") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "musculi suprahyoidei") AnnotationAssertion(Annotation( ) "suprahyoid") AnnotationAssertion(Annotation( ) "suprahyoidala") AnnotationAssertion( "UBERON:0008571") AnnotationAssertion(rdfs:label "suprahyoid muscle") AnnotationAssertion(rdfs:seeAlso "https://github.com/obophenotype/uberon/issues/697"^^xsd:anyURI) AnnotationAssertion( "Suprahyoid:muscles.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (posterior crico-arytenoid) AnnotationAssertion(Annotation( ) "The posterior cricoarytenoid muscles are extremely small, paired muscles that extend from the posterior cricoid cartilage to the arytenoid cartilages in the larynx. By rotating the arytenoid cartilages laterally, these muscles abduct the vocal cords and thereby open the rima glottidis. Their action opposes the lateral cricoarytenoid muscles. The posterior cricoarytenoid muscles receive innervation from the recurrent laryngeal branch of the vagus nerve (CN X). Paralysis of the posterior cricoarytenoid muscles may lead to asphyxiation as they are the only laryngeal muscles to open the true vocal folds, allowing inspiration and expiration.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:46576") AnnotationAssertion(Annotation( "FMA:46576") "posterior cricoarytenoid") AnnotationAssertion(Annotation( ) "posterior cricoarytenoid muscle") AnnotationAssertion(Annotation( "FMA:46576") "posterior cricoarytenoideus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "cricoarytaenoideus posterior") AnnotationAssertion(Annotation( ) "cricoarytænoideus posterior") AnnotationAssertion(Annotation( ) Annotation( ) "musculus cricoarytenoideus posterior") AnnotationAssertion( "UBERON:0008572") AnnotationAssertion(rdfs:label "posterior crico-arytenoid") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/9/9d/Musculuscricoarytenoideusposterior.png"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (lateral crico-arytenoid) AnnotationAssertion(Annotation( ) "The lateral cricoarytenoid (also anterior cricoarytenoid) muscles extend from the lateral cricoid cartilage to the ipsilateral arytenoid cartilage. By rotating the arytenoid cartilages medially, these muscles adduct the vocal cords and thereby close the rima glottidis, protecting the airway. (Their action is antagonistic to that of the posterior cricoarytenoid muscles. ) The lateral cricoarytenoid muscles receive innervation from the recurrent laryngeal branch of the vagus nerve (CN X).") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:46579") AnnotationAssertion(Annotation( "FMA:46579") "lateral cricoarytenoid") AnnotationAssertion(Annotation( ) "lateral cricoarytenoid muscle") AnnotationAssertion(Annotation( "FMA:46579") "lateral cricoarytenoideus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "cricoarytaenoideus lateralis") AnnotationAssertion(Annotation( ) "cricoarytaenoideus lateralis muscle") AnnotationAssertion(Annotation( ) "cricoarytænoideus lateralis") AnnotationAssertion(Annotation( ) "cricoarytænoideus lateralis muscle") AnnotationAssertion(Annotation( ) Annotation( ) "musculus cricoarytenoideus lateralis") AnnotationAssertion( "UBERON:0008573") AnnotationAssertion(rdfs:label "lateral crico-arytenoid") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/3/34/Musculuscricoarytenoideuslateralis.png"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (transverse arytenoid) AnnotationAssertion(Annotation( ) "The tranverse arytenoid crosses transversely between the two cartilages. It is an unpaired muscle running from one arytenoid to another to pull the arytenoids together.") AnnotationAssertion( ) AnnotationAssertion( "FMA:46582") AnnotationAssertion( "uberon") AnnotationAssertion( "arytenoid transversus") AnnotationAssertion(Annotation( ) "tranverse arytenoid muscle") AnnotationAssertion( "UBERON:0008574") AnnotationAssertion(rdfs:label "transverse arytenoid") SubClassOf( ) # Class: (oblique arytenoid) AnnotationAssertion(Annotation( ) "The oblique arytenoid, the more superficial Arytenoid muscle, forms two fasciculi, which pass from the base of one cartilage to the apex of the opposite one, and therefore cross each other like the limbs of the letter X; a few fibers are continued around the lateral margin of the cartilage, and are prolonged into the aryepiglottic fold; they are sometimes described as a separate muscle, the Aryepiglotticus. The aryepiglottic muscle together with the transverse arytenoid and the thyroarytenoid work as a sphincter and close the larynx as we swallow or cough. Its innervation is by the recurrent laryngeal nerve (from vagus) just like all the intrinsic muscles of the larynx except the cricothyroid muscle.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:46583") AnnotationAssertion( "uberon") AnnotationAssertion( "arytenoid obliquus") AnnotationAssertion(Annotation( ) "oblique arytenoid muscle") AnnotationAssertion( "UBERON:0008575") AnnotationAssertion(rdfs:label "oblique arytenoid") SubClassOf( ) # Class: (thyro-arytenoid) AnnotationAssertion(Annotation( ) "The Thyroarytenoid is a broad, thin, muscle which lies parallel with and lateral to the vocal fold, and supports the wall of the ventricle and its appendix. It functions in fine tonal control of the vocal cords.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:46588") AnnotationAssertion( "NCIT:C33776") AnnotationAssertion(Annotation( "ncithesaurus:Thyroarytenoid_Muscle") "UMLS:C0224183") AnnotationAssertion(Annotation( ) "thyroarytenoid") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "musculus thyroarytenoideus") AnnotationAssertion(Annotation( ) "thyreoarytaenoideus") AnnotationAssertion(Annotation( ) "thyreoarytaenoideus muscle") AnnotationAssertion(Annotation( ) "thyreoarytænoideus") AnnotationAssertion(Annotation( ) "thyreoarytænoideus muscle") AnnotationAssertion(Annotation( ) "thyreoepiglotticus") AnnotationAssertion(Annotation( ) "thyro-arytenoid %26 vocalis") AnnotationAssertion(Annotation( ) "thyro-arytenoid muscle") AnnotationAssertion(Annotation( ) "thyroarytenoid muscle") AnnotationAssertion(Annotation( ) "thyroarytænoideus") AnnotationAssertion(Annotation( ) "ventricularis") AnnotationAssertion(Annotation( ) "ventricularis muscle") AnnotationAssertion( "UBERON:0008576") AnnotationAssertion(rdfs:label "thyro-arytenoid") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/6/64/Musculusthyreoarytenoideus.png"^^xsd:anyURI) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf(Annotation( "recurrent laryngeal branch of the vagus") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "Inner surface of the thyroid cartilage") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "Anterior surface of arytenoid cartilage") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (vocalis muscle) AnnotationAssertion(Annotation( ) "The vocal muscle is the upper portion of the thyroarytenoid muscle which is primarily involved in producing speech.") AnnotationAssertion(Annotation( "FMA"^^xsd:string) "in FMA this is not placed under thyro-arytenoid but almost all sources consider this to be the case (confirmed with FEED:rd)") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:46591") AnnotationAssertion( "NCIT:C33886") AnnotationAssertion(Annotation( "ncithesaurus:Vocalis_Muscle") "UMLS:C0224181") AnnotationAssertion(Annotation( "FMA:46591") "vocal muscle") AnnotationAssertion( "vocalis") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "musculus vocalis") AnnotationAssertion( "UBERON:0008577") AnnotationAssertion(rdfs:label "vocalis muscle") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/6/64/Musculusthyreoarytenoideus.png"^^xsd:anyURI) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ) SubClassOf(Annotation( "FEED:rd") Annotation( "Wikipedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (superior longitudinal muscle of tongue) AnnotationAssertion(Annotation( ) "A muscle of the tongue that consists of a thin stratum of oblique and longitudinal fibers immediately underlying the mucous membrane on the dorsum of the tongue.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:46693") AnnotationAssertion(Annotation( "FMA:46693") "musculus longitudinalis superior") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "longitudinalis linguae superior") AnnotationAssertion(Annotation( ) "longitudinalis linguæ superior") AnnotationAssertion(Annotation( ) Annotation( ) "musculus longitudinalis superior linguae") AnnotationAssertion(Annotation( ) "superior lingualis") AnnotationAssertion(Annotation( ) "superior longitudinal muscle") AnnotationAssertion( "UBERON:0008582") AnnotationAssertion(rdfs:label "superior longitudinal muscle of tongue") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/3/30/Musculuslongitudinalissuperiorlinguae.png"^^xsd:anyURI) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ) SubClassOf(Annotation( "Wikipedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "edges of the tongue") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (transverse muscle of tongue) AnnotationAssertion(Annotation( ) "A muscle of the tongue that consists of fibers which arise from the median fibrous septum and pass lateralward to be inserted into the submucous fibrous tissue at the sides of the tongue.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:18281") AnnotationAssertion( "FMA:46695") AnnotationAssertion( "MA:0002328") AnnotationAssertion( "NCIT:C52706") AnnotationAssertion(Annotation( "ncithesaurus:Intrinsic_Tongue_Muscle_Transverse_Component") "UMLS:C1708561") AnnotationAssertion(Annotation( "MA:0002328") "intrinsic tongue muscle transverse component") AnnotationAssertion(Annotation( "FMA:46695") "transverse lingual muscle") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "musculus transversus linguae") AnnotationAssertion(Annotation( ) "transverse muscle") AnnotationAssertion(Annotation( ) "transversus linguae") AnnotationAssertion(Annotation( ) "transversus linguæ") AnnotationAssertion(Annotation( ) "transversus muscle") AnnotationAssertion( "UBERON:0008583") AnnotationAssertion(rdfs:label "transverse muscle of tongue") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/1/14/Musculustransversuslinguae.png"^^xsd:anyURI) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf(Annotation( "Wikipedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "sides of the tongue") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (vertical muscle of tongue) AnnotationAssertion(Annotation( ) "A muscle of the tongue that is found only at the borders of the forepart of the tongue. Its fibers extend from the upper to the under surface of the organ.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:18282") AnnotationAssertion( "FMA:46696") AnnotationAssertion( "MA:0002329") AnnotationAssertion( "NCIT:C52708") AnnotationAssertion(Annotation( "ncithesaurus:Intrinsic_Tongue_Muscle_Vertical_Component") "UMLS:C1708562") AnnotationAssertion(Annotation( "MA:0002329") "intrinsic tongue muscle vertical component") AnnotationAssertion(Annotation( "FMA:46696") "vertical lingual muscle") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "musculus verticalis linguae") AnnotationAssertion(Annotation( ) "vertical muscle") AnnotationAssertion(Annotation( ) "verticalis linguae") AnnotationAssertion(Annotation( ) "verticalis linguae muscle") AnnotationAssertion(Annotation( ) "verticalis linguæ") AnnotationAssertion(Annotation( ) "verticalis linguæ muscle") AnnotationAssertion(Annotation( ) "verticalis muscle") AnnotationAssertion( "UBERON:0008584") AnnotationAssertion(rdfs:label "vertical muscle of tongue") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/d/d8/Gray1020.png"^^xsd:anyURI) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf(Annotation( "Submucosal fibrous layer of dorsum of tongue") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "Inferior surface borders of tongue") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (levator veli palatini) AnnotationAssertion(Annotation( ) "The levator veli palatini is the elevator muscle of the velum palatinum in the human body. During swallowing, it contracts, elevating the soft palate to help prevent food from entering the nasopharynx. It is innervated via the pharyngeal plexus, primarily by the vagus nerve (CN X). The levator veli palatini (Levator palati) is a thick, rounded muscle situated lateral to the choanC&. It arises from the under surface of the apex of the petrous part of the temporal bone and from the medial lamina of the cartilage of the auditory tube. After passing above the upper concave margin of the Constrictor pharyngis superior it spreads out in the palatine velum, its fibers extending obliquely downward and medially to the middle line, where they blend with those of the opposite side.") AnnotationAssertion(Annotation( "2012-07-02"^^xsd:string) Annotation( "FEED"^^xsd:string) Annotation( "http://www.feedexp.org"^^xsd:string) "The levator veli palatini is part of the soft palate that attaches to the cranial base, pharyngotympanic tube and the soft palate and is innervated by Cranial Nerve X via the pharyngeal plexus.[FEED]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:46727") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "levator palati") AnnotationAssertion(Annotation( ) "levator veli") AnnotationAssertion(Annotation( ) "levator veli palatini muscle") AnnotationAssertion(Annotation( ) "levator velum palatini muscle") AnnotationAssertion(Annotation( ) Annotation( ) "musculus levator veli palatini") AnnotationAssertion( "UBERON:0008585") AnnotationAssertion(rdfs:label "levator veli palatini") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/a/a5/Musculuslevatorvelipalatini.png"^^xsd:anyURI) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf(Annotation( "FMA-abduced-lr"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "Pharyngeal Branch of Vagus") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (tensor veli palatini) AnnotationAssertion(Annotation( ) "The tensor veli palatini (tensor palati) is a broad, thin, ribbon-like muscle in the head that tenses the soft palate.") AnnotationAssertion(Annotation( "2012-07-02"^^xsd:string) Annotation( "FEED"^^xsd:string) Annotation( "http://www.feedexp.org"^^xsd:string) "The tensor veli palatini is a muscle of the soft palate that attaches to the cranial base and pharyngotympanic tube, wraps around the pterygoid hamulus and then attaches to the midline palatal raphe of the soft palate that is innervated by cranial nerve V3.[FEED]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:46730") AnnotationAssertion( "tensor veli palatini muscle") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "musculus tensor veli palatini") AnnotationAssertion(Annotation( ) "tensor palati") AnnotationAssertion(Annotation( ) "tensor palati muscle") AnnotationAssertion(Annotation( ) "tensor veli palatini") AnnotationAssertion( "UBERON:0008586") AnnotationAssertion(rdfs:label "tensor veli palatini") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/3/30/Musculustensorvelipalatini.png"^^xsd:anyURI) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ) SubClassOf(Annotation( "FMA-abduced-lr"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "medial pterygoid of mandibular nerve") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (procerus) AnnotationAssertion(Annotation( ) "The Procerus is a small pyramidal slip of muscle deep to the superior orbital nerve, artery and vein.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:46769") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "depressor glabellae") AnnotationAssertion(Annotation( ) Annotation( ) "depressor glabellae") AnnotationAssertion(Annotation( ) Annotation( ) "musculus procerus glabellae") AnnotationAssertion(Annotation( ) "procerus muscle") AnnotationAssertion(Annotation( ) "pyramidalis nasi") AnnotationAssertion(Annotation( ) Annotation( ) "pyramidalis nasi") AnnotationAssertion( "UBERON:0008588") AnnotationAssertion(rdfs:label "procerus") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/7/76/Procerus.png"^^xsd:anyURI) SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (depressor septi nasi) AnnotationAssertion(Annotation( ) "The depressor septi (Depressor alE nasi) arises from the incisive fossa of the maxilla. Its fibers ascend to be inserted into the nasal septum and back part of the alar part of nasalis muscle. It lies between the mucous membrane and muscular structure of the lip.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:46777") AnnotationAssertion(Annotation( ) "depressor septi") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "depressor alae nasi") AnnotationAssertion(Annotation( ) "depressor alæ nasi") AnnotationAssertion(Annotation( ) "depressor septi nasi muscle") AnnotationAssertion(Annotation( ) Annotation( ) "musculus depressor septi nasi") AnnotationAssertion( "UBERON:0008589") AnnotationAssertion(rdfs:label "depressor septi nasi") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/6/6c/Musculusdepressorseptinasi.PNG"^^xsd:anyURI) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf(Annotation( "incisive fossa of the maxilla") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (depressor supercilii) AnnotationAssertion(Annotation( ) "The Depressor Supercilii is an eye muscle of the human body. The nature of this muscle is in some dispute. Few printed anatomies include it (Netter, et al. ) and many authorities consider it to be part of the orbicularis oculi muscle . On the other hand, many dermatologists, ophthalmologists and plastic surgeons hold that the depressor supercilli is a distinct muscle and has a definite, individual effect on the movement of the eybrow and skin of the glabella.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:46798") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "depressor supercilii muscle") AnnotationAssertion(Annotation( ) Annotation( ) "musculus depressor supercilii") AnnotationAssertion( "UBERON:0008591") AnnotationAssertion(rdfs:label "depressor supercilii") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/e/e2/Gray379.png"^^xsd:anyURI) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf(Annotation( "Medial aspect of bony orbit") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (levator labii superioris alaeque nasi) AnnotationAssertion(Annotation( ) "The levator labii superioris alaeque nasi muscle is, translated from Latin, the 'lifter of the upper lip and of the wing of the nose'. It has the longest name of any muscle in an animal.") AnnotationAssertion( ) AnnotationAssertion( "FMA:46802") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "alaeque") AnnotationAssertion(Annotation( ) "elvis muscle") AnnotationAssertion(Annotation( ) "levator labii superioris alaequae nasi muscle") AnnotationAssertion(Annotation( ) "levator labii superioris alaeque nasi") AnnotationAssertion(Annotation( ) Annotation( ) "musculus levator labii superioris alaequae nasi") AnnotationAssertion( "UBERON:0008592") AnnotationAssertion(rdfs:label "levator labii superioris alaeque nasi") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/1/1c/Musculuslevatorlabiisuperiorisalaequenasi.png"^^xsd:anyURI) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf(Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "nostril and upper lip") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (zygomaticus major muscle) AnnotationAssertion(Annotation( "MFMO:0000138") "Facial muscle attached to the modiolus, corner (angle) of the mouth, and zygomatic bone. See Diogo 2008; Diogo et al., 2009; Burrows et al.., 2011., also DuBrul, 1980.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:46810") AnnotationAssertion( "MFMO:0000138") AnnotationAssertion( "NCIT:C53183") AnnotationAssertion(Annotation( "ncithesaurus:Zygomaticus_Major") "UMLS:C0224115") AnnotationAssertion(Annotation( "MFMO:0000138") "zygomatic muscle") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "MFMO:0000138") "auriculolabialis superior") AnnotationAssertion(Annotation( ) Annotation( ) "musculus zygomaticus major") AnnotationAssertion(Annotation( ) "zygomatic major") AnnotationAssertion(Annotation( ) "zygomatic major muscle") AnnotationAssertion(Annotation( ) "zygomaticcus major") AnnotationAssertion(Annotation( ) "zygomaticus major") AnnotationAssertion( "UBERON:0008593") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "zygomaticus major muscle") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/7/7e/Zygomaticus.png"^^xsd:anyURI) SubClassOf(Annotation( "true"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (zygomaticus minor muscle) AnnotationAssertion(Annotation( "MFMO:0000138") "Facial muscle attached to the modiolus, corner (angle) of the mouth, and zygomatic bone. This muscle is ventral to the zygomaticus minor and dorsal to the platysma muscle. In many mammals this muscle also has an attachment to the cartilage of the external ear, in which case it is called the auriculolabialis inferior. See Diogo 2008; Diogo et al., 2009; Burrows et al.., 2011., also DuBrul, 1980.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:46811") AnnotationAssertion( "MFMO:0000137") AnnotationAssertion( "NCIT:C53184") AnnotationAssertion(Annotation( "ncithesaurus:Zygomaticus_Minor") "UMLS:C0224116") AnnotationAssertion(Annotation( "MFMO:0000137") "musculus quadratus labii superioris, zygomatic head") AnnotationAssertion(Annotation( "MFMO:0000137") "musculus zygomaticus minor") AnnotationAssertion(Annotation( "MFMO:0000137") "square muscle of the upper lip, zygomatic head") AnnotationAssertion( "auriculolabialis superior") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "MFMO:0000137") "auriculolabialis superior") AnnotationAssertion( "UBERON:0008594") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "zygomaticus minor muscle") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/4/46/Musculuszygomaticusminor.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (levator anguli oris) AnnotationAssertion(Annotation( ) "The levator anguli oris (caninus) is a facial muscle of the mouth arising from the canine fossa, immediately below the infraorbital foramen. Its fibers are inserted into the angle of the mouth, intermingling with those of the Zygomaticus, Triangularis, and Orbicularis oris.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:46822") AnnotationAssertion(Annotation( ) "levator anguli oris muscle") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "caninus") AnnotationAssertion(Annotation( ) "caninus muscle") AnnotationAssertion(Annotation( ) "levator anguli oris") AnnotationAssertion(Annotation( ) "musculus levator anguli oris") AnnotationAssertion( "UBERON:0008595") AnnotationAssertion(rdfs:label "levator anguli oris") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf(Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (mentalis muscle) AnnotationAssertion(Annotation( "MFMO:0000122") "A muscle of facial expression, innervated by the facial nerve, attached to the skin of the lower lip and inferior to the lower lip (in humans this region is called the chin or mental region), the orbicularis oris muscle, and the mandible in the symphyseal region. See Diogo et al., 2009; Burrows et al., 2011).") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:46825") AnnotationAssertion( "MFMO:0000122") AnnotationAssertion(Annotation( "MFMO:0000122") "mentalis") AnnotationAssertion(Annotation( ) Annotation( ) "musculus mentalis") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0008596") AnnotationAssertion(rdfs:label "mentalis muscle") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/3/37/Mentalis.png"^^xsd:anyURI) SubClassOf(Annotation( "MFMO") ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA-abduced-lr"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (depressor anguli oris muscle) AnnotationAssertion(Annotation( ) "The Depressor anguli oris (Triangularis) arises from the oblique line of the mandible, whence its fibers converge, to be inserted, by a narrow fasciculus, into the angle of the mouth.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37842") AnnotationAssertion( "FMA:46828") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "depressor anguli oris") AnnotationAssertion(Annotation( ) Annotation( ) "musculus depressor anguli oris") AnnotationAssertion(Annotation( ) "triangularis") AnnotationAssertion(Annotation( ) "triangularis muscle") AnnotationAssertion( "UBERON:0008597") AnnotationAssertion(rdfs:label "depressor anguli oris muscle") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/3/36/Gray381.png"^^xsd:anyURI) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf(Annotation( "tubercle of mandible") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "modiolus of mouth") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (risorius muscle) AnnotationAssertion(Annotation( "MFMO:0000141") "Facial muscle that attaches to the fascia of the masseter muscle and the facia of the skin in the region of the corner (angle) of the mouth. Even in species in which this muscle is present, it is highly variable. A true risorius muscle may only be present in Hominins (humans and great apes). See Diogo 2008; Diogo et al., 2009; Burrows et al.., 2011., also DuBrul, 1980.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:46838") AnnotationAssertion( "MFMO:0000141") AnnotationAssertion(Annotation( ) Annotation( ) "musculus risorius") AnnotationAssertion(Annotation( "MFMO:0000141") "risorius") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0008598") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "risorius muscle") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/a/af/Musculusrisorius.png"^^xsd:anyURI) SubClassOf(Annotation( "MFMO") ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (helicis major) AnnotationAssertion(Annotation( ) "The Helicis major is a narrow vertical band situated upon the anterior margin of the helix. It arises below, from the spina helicis, and is inserted into the anterior border of the helix, just where it is about to curve backward.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:48968") AnnotationAssertion(Annotation( ) Annotation( ) "musculus helicis major") AnnotationAssertion( "uberon") AnnotationAssertion( "helicis major muscle") AnnotationAssertion( "UBERON:0008603") AnnotationAssertion(rdfs:label "helicis major") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/d/d2/Gray906.png"^^xsd:anyURI) SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (helicis minor) AnnotationAssertion(Annotation( ) "The Helicis minor is an oblique fasciculus, covering the crus helicis.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:48971") AnnotationAssertion( "uberon") AnnotationAssertion( "helicis minor muscle") AnnotationAssertion(Annotation( ) Annotation( ) "musculus helicis minor") AnnotationAssertion( "UBERON:0008604") AnnotationAssertion(rdfs:label "helicis minor") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/d/d2/Gray906.png"^^xsd:anyURI) SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (tragicus muscle) AnnotationAssertion(Annotation( ) "The Tragicus is a short, flattened vertical band on the lateral surface of the tragus.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:48974") AnnotationAssertion(Annotation( "FMA:48974") "tragicus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "musculus tragicus") AnnotationAssertion( "tragicus muscle") AnnotationAssertion( "UBERON:0008605") AnnotationAssertion(rdfs:label "tragicus muscle") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/d/d2/Gray906.png"^^xsd:anyURI) SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (antitragicus muscle) AnnotationAssertion(Annotation( ) "The Antitragicus arises from the outer part of the antitragus, and is inserted into the cauda helicis and antihelix.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:48980") AnnotationAssertion(Annotation( "FMA:48980") "antitragicus") AnnotationAssertion( "uberon") AnnotationAssertion( "antitragicus muscle") AnnotationAssertion(Annotation( ) Annotation( ) "musculus antitragicus") AnnotationAssertion( "UBERON:0008606") AnnotationAssertion(rdfs:label "antitragicus muscle") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/5/58/Musculusantitragicus.png"^^xsd:anyURI) SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (transverse muscle of auricle) AnnotationAssertion(Annotation( ) "The transverse muscle of auricle is placed on the cranial surface of the pinna. It consists of scattered fibers, partly tendinous and partly muscular, extending from the eminentia conchae to the prominence corresponding with the scapha.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:48983") AnnotationAssertion(Annotation( "FMA:48983") "transverse muscle of pinna") AnnotationAssertion(Annotation( ) "transversus auriculae") AnnotationAssertion(Annotation( "FMA:48983") "transversus auricularis") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "musculus transversus auriculae") AnnotationAssertion( "UBERON:0008607") AnnotationAssertion(rdfs:label "transverse muscle of auricle") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/d/d2/Gray906.png"^^xsd:anyURI) SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (oblique muscle of auricle) AnnotationAssertion(Annotation( ) "The oblique muscle of auricle, on the cranial surface, consists of a few fibers extending from the upper and back part of the concha to the convexity immediately above it.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:48986") AnnotationAssertion(Annotation( "FMA:48986") "oblique muscle of pinna") AnnotationAssertion(Annotation( ) "obliquus auriculae") AnnotationAssertion(Annotation( "FMA:48986") "obliquus auricularis muscle") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "musculus obliquus auriculae") AnnotationAssertion(Annotation( ) "obliquus auriculæ") AnnotationAssertion( "UBERON:0008608") AnnotationAssertion(rdfs:label "oblique muscle of auricle") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/d/d2/Gray906.png"^^xsd:anyURI) SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (transversus menti muscle) AnnotationAssertion(Annotation( ) "The transversus menti, or transverse muscle of the chin, is a facial muscle that is often considered to be the superficial fibers of the depressor anguli oris muscle which cross to the other side of the face.") AnnotationAssertion( ) AnnotationAssertion( "FMA:49080") AnnotationAssertion(Annotation( "FMA:49080") "transverse menti") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "musculus transversus menti") AnnotationAssertion(Annotation( ) "transversus menti") AnnotationAssertion( "UBERON:0008609") AnnotationAssertion(rdfs:label "transversus menti muscle") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/3/36/Gray381.png"^^xsd:anyURI) SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (scalene muscle) AnnotationAssertion(Annotation( ) "Any of the three pairs of muscles in the lateral neck, namely the scalenus anterior, scalenus medius, and scalenus posterior. They are innervated by the spinal nerves C4-C8[WP].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:64829") AnnotationAssertion( "NCIT:C33517") AnnotationAssertion(Annotation( "ncithesaurus:Scalene_Muscle") "UMLS:C0448350") AnnotationAssertion(Annotation( ) "scalene muscles") AnnotationAssertion(Annotation( "FMA:64829") "scalenus muscle") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "lateral cervical muscle") AnnotationAssertion(Annotation( ) "lateral cervical muscles") AnnotationAssertion(Annotation( ) "lateral vertebral muscle") AnnotationAssertion(Annotation( ) "m scalenus") AnnotationAssertion(Annotation( ) "scalene muscle") AnnotationAssertion(Annotation( ) "scalenes") AnnotationAssertion(Annotation( ) "scaleneus") AnnotationAssertion(Annotation( ) "scaleni") AnnotationAssertion(Annotation( ) "scalenus") AnnotationAssertion( "UBERON:0008611") AnnotationAssertion(rdfs:label "scalene muscle") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/6/6e/Scalenus.png"^^xsd:anyURI) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "first and second ribs") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "first and second ribs") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (muscle of pelvic diaphragm) AnnotationAssertion(Annotation( ) "A muscular partition formed by the levatores ani and coccygei, with which may be included the parietal pelvic fascia on their upper and lower aspects. It separates the pelvic cavity above from the perineal region below.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:64856") AnnotationAssertion( "NCIT:C33290") AnnotationAssertion(Annotation( "ncithesaurus:Pelvic_Floor_Muscle") "UMLS:C0932441") AnnotationAssertion(Annotation( "FMA:64856") "muscle of pelvic floor") AnnotationAssertion(Annotation( "FMA:64856") "pelvic diaphragm muscle") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "diaphragm of the pelvis") AnnotationAssertion(Annotation( ) Annotation( ) "diaphragma pelvis") AnnotationAssertion(Annotation( ) "pelvic diaphragm") AnnotationAssertion(Annotation( ) "pelvic floor muscles") AnnotationAssertion(Annotation( ) "pelvic muscles") AnnotationAssertion( "UBERON:0008612") AnnotationAssertion(rdfs:label "muscle of pelvic diaphragm") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/6/63/Gray404.png"^^xsd:anyURI) SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (innermost intercostal muscle) AnnotationAssertion(Annotation( ) "The Innermost intercostal muscle is a layer of intercostal muscle beneath the intercostal nerves and internal intercostal muscles. These are divided into transversus thoracis anteriorly, lateral muscle slips laterally and subcostalis posteriorly.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:9758") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "musculus intercostalis intimus") AnnotationAssertion(Annotation( ) Annotation( ) "musculus intercostalis intimus") AnnotationAssertion( "UBERON:0008617") AnnotationAssertion(rdfs:label "innermost intercostal muscle") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (subcostal muscle) AnnotationAssertion(Annotation( ) "The Subcostales (Infracostales) consist of muscular and aponeurotic fasciculi, which are usually well-developed only in the lower part of the thorax; each originates from the inner surface of one rib, and is inserted into the inner surface of the second or third rib above, near its angle. Their fibers run in the same direction as those of the Intercostales interni.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:9759") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "musculus subcostalis") AnnotationAssertion(Annotation( ) "subcostal muscles") AnnotationAssertion(Annotation( ) "subcostales") AnnotationAssertion(Annotation( ) "subcostales muscle") AnnotationAssertion(Annotation( ) "subcostales muscles") AnnotationAssertion(Annotation( ) "subcostalis") AnnotationAssertion( "UBERON:0008618") AnnotationAssertion(rdfs:label "subcostal muscle") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ) SubClassOf(Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "inner surface of one rib") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "inner surface of the second or third rib below near its angle") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (scalenus anterior) AnnotationAssertion(Annotation( ) "The Scalenus anterior (Scalenus anticus), also known as anterior scalene muscle, lies deeply at the side of the neck, behind the Sternocleidomastoideus. It arises from the anterior tubercles of the transverse processes of the third, fourth, fifth, and sixth cervical vertebrC&, and descending, almost vertically, is inserted by a narrow, flat tendon into the scalene tubercle on the inner border of the first rib, and into the ridge on the upper surface of the rib in front of the subclavian groove.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:13385") AnnotationAssertion(Annotation( ) "anterior scalene") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "musculus scalenus anterior") AnnotationAssertion(Annotation( ) "scalenus anterior muscle") AnnotationAssertion(Annotation( ) "scalenus anticus") AnnotationAssertion( "UBERON:0008622") AnnotationAssertion(rdfs:label "scalenus anterior") AnnotationAssertion( "Scalenus:anterior.png"^^xsd:anyURI) SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (stylohyoid muscle) AnnotationAssertion(Annotation( "MFMO:0000061") "The stylohyoid is a pharyngeal arch II muscle that participates in oral/pharygeal behaviors and is innervated by the stylohoid branch of the facial nerve and attaches to the stylohyal and the non-stylohyal part of the hyoid apparatus.") AnnotationAssertion(Annotation( "2012-07-02"^^xsd:string) Annotation( "FEED"^^xsd:string) Annotation( "http://www.feedexp.org"^^xsd:string) "The stylohyoid is a pharyngeal arch II muscle that participates in oral/pharygeal behaviors and is innervated by the stylohoid branch of the facial nerve and attaches to the stylohyal.[FEED]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:9625") AnnotationAssertion( "MFMO:0000061") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "musculus stylohyoideus") AnnotationAssertion(Annotation( ) "stylohyoid") AnnotationAssertion(Annotation( ) "stylohyoideus") AnnotationAssertion(Annotation( ) "stylohyoideus muscle") AnnotationAssertion(Annotation( ) "stylohyoideus muscles") AnnotationAssertion( "UBERON:0008712") AnnotationAssertion(rdfs:label "stylohyoid muscle") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/9/94/Musculi_colli_stylohyoideus.svg"^^xsd:anyURI) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf(Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "greater cornu of hyoid bone") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (pectoral girdle and thoracic body wall skeletal muscle) AnnotationAssertion( "EHDAA2:0001421") AnnotationAssertion( "EMAPA:17748") AnnotationAssertion( "RETIRED_EHDAA2:0001422") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0008713") AnnotationAssertion(rdfs:label "pectoral girdle and thoracic body wall skeletal muscle") SubClassOf( ) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (muscle tissue of prostate) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A muscle tissue that is part of a prostate gland.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "NCIT:C13100") AnnotationAssertion(Annotation( "ncithesaurus:Prostatic_Muscular_Tissue") "UMLS:C1183911") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "prostate gland muscle tissue") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "prostate muscle tissue") AnnotationAssertion( "prostatic muscle") AnnotationAssertion( "prostatic musclular tissue") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0008715") AnnotationAssertion(rdfs:label "muscle tissue of prostate") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (hilum of kidney) AnnotationAssertion(Annotation( ) "An opening on medial margin of the kidney leading into the renal sinus. he renal vessels enter/leave the kidney at the hilum; the renal pelvis leaves the kidney at the hilum.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:15610") AnnotationAssertion( "NCIT:C32740") AnnotationAssertion(Annotation( "ncithesaurus:Hilar_Area_of_the_Kidney") "UMLS:C0227608") AnnotationAssertion( "galen:HilumOfKidney") AnnotationAssertion( "hilar area of the kidney") AnnotationAssertion(Annotation( "FMA:15610") "renal hilum") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0008716") AnnotationAssertion(rdfs:label "hilum of kidney") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (proximal epiphysis of tibia) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A proximal epiphysis that is part of a tibia.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:33113") AnnotationAssertion( "NCIT:C32722") AnnotationAssertion(Annotation( "ncithesaurus:Head_of_the_Tibia") "UMLS:C0932431") AnnotationAssertion(Annotation( "FMA:33113") "head of tibia") AnnotationAssertion(Annotation( "FMA:33113") "proximal end of tibia") AnnotationAssertion( "proximal tibial epiphysis") AnnotationAssertion(Annotation( "FMA:33113") "upper end of tibia") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0008772") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "proximal epiphysis of tibia") SubClassOf( ) SubClassOf( ) # Class: (proximal epiphysis of fibula) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A proximal epiphysis that is part of a fibula.") AnnotationAssertion(Annotation( ) "The upper extremity or head of the fibula is of an irregular quadrate form, presenting above a flattened articular surface, directed upward, forward, and medialward, for articulation with a corresponding surface on the lateral condyle of the tibia. On the lateral side is a thick and rough prominence continued behind into a pointed eminence, the apex, which projects upward from the posterior part of the head. The prominence, at its upper and lateral part, gives attachment to the tendon of the Biceps femoris and to the fibular collateral ligament of the knee-joint, the ligament dividing the tendon into two parts. The remaining part of the circumference of the head is rough, for the attachment of muscles and ligaments. It presents in front a tubercle for the origin of the upper and anterior fibers of the Peronæus longus, and a surface for the attachment of the anterior ligament of the head; and behind, another tubercle, for the attachment of the posterior ligament of the head and the origin of the upper fibers of the Soleus[Wikipedia:Head_of_fibula].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37890") AnnotationAssertion( "FMA:33729") AnnotationAssertion( "NCIT:C32719") AnnotationAssertion(Annotation( "ncithesaurus:Head_of_the_Fibula") "UMLS:C0223908") AnnotationAssertion( "galen:HeadOfFibula") AnnotationAssertion(Annotation( ) Annotation( ) "caput fibulae") AnnotationAssertion(Annotation( "FMA:33729") "head of fibula") AnnotationAssertion(Annotation( "FMA:33729") "proximal end of fibula") AnnotationAssertion(Annotation( "FMA:33729") "upper end of fibula") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:33729") "fibular head") AnnotationAssertion( "UBERON:0008775") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "proximal epiphysis of fibula") SubClassOf( ) SubClassOf( ) # Class: (inner cell mass derived hypoblast) AnnotationAssertion(Annotation( "MP:0011183") "A thin monolayer of small cuboidal cells that make up the lower layer of the bilaminar embryonic disc, beneath the epiblast.") AnnotationAssertion(Annotation( "MP:0011183") "This layer can be distinguished from the overlying epiblast in the mouse embryo as early as day 4.5, and day 7 in human). The cells of the hypoblast are not thought to contribute to the developing embryo proper, but contribute to several extraembryonic structures. In rodents, the hypoblast cells form the parietal endoderm, parietal and visceral yolk sac as well as extraembryonic membranes, such as the extraembryonic endoderm, the yolk sac and the stalk that links it to the endodermal digestive tube. In human embryos, hypoblast cells migrate and line the blastocoelic cavity of the blastocyst, forming the primary yolk sac and Heuser's membrane. Although both the murine parietal yolk sac and the human primary yolk sac are transient structures, they are not developmental equivalents. A second wave of hypoblast cells migrates to form the definitive yolk sac which displaces the primary yolk sac and is equivalent to the murine visceral yolk sac. The primary yolk sac breaks up into small vesicles that can persist at the mural (abembryonic) pole.") AnnotationAssertion( "UBERON:0000417") AnnotationAssertion( "UBERON:0003225") AnnotationAssertion( "UBERON:0003226") AnnotationAssertion( ) AnnotationAssertion( "BTO:0002123") AnnotationAssertion( "EHDAA2:0000796") AnnotationAssertion( "EHDAA:44") AnnotationAssertion( "EHDAA:79") AnnotationAssertion( "EMAPA:16051") AnnotationAssertion( "FMA:85520") AnnotationAssertion(Annotation( "ISBN:9780878932504") Annotation( "MP:0011185") "primitive endoderm") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "GO:0090008") Annotation( "ISBN:9780878932504") Annotation( "VHOG:0001222") Annotation( ) "hypoblast") AnnotationAssertion(Annotation( "MP:0011185") "primary endoderm") AnnotationAssertion(Annotation( "EMAPA:16051") "proximal endoderm") AnnotationAssertion(Annotation( "ISBN:9780878932504") "visceral endoderm") AnnotationAssertion( "UBERON:0008776") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "inner cell mass derived hypoblast") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "Wikipedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (hypaxial musculature) AnnotationAssertion(Annotation( ) "Musculature that is derived from the hypaxial myotome region, trunk muscles that lie ventral to the horizontal septum of the vertebrae. Hypaxial muscles include some vertebral muscles, the diaphragm, the abdominal muscles, and all limb muscles.") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0000228") Annotation( "AAO"^^xsd:string) Annotation( "UBERON:0008777") "Trunk muscle that lies ventral to the horizontal septum of the vertebrae.[AAO]") AnnotationAssertion(Annotation( "WP"^^xsd:string) "The hypaxial muscles are located on the lower side of the body, often below the horizontal septum in many species (primarily fish and amphibians). In amniotes, the positional distinctions have been lost as the body's muscles have changed through evolution, but in all species, the hypaxial muscles are innervated by the ventral ramus of the spinal nerves, while the epaxial muscles are innervated by the dorsal ramus.") AnnotationAssertion( ) AnnotationAssertion( "AAO:0000228") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37852") AnnotationAssertion( "XAO:0003228") AnnotationAssertion(Annotation( ) "hypaxial muscles") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "XAO:0003228") "hypaxial muscle") AnnotationAssertion( "UBERON:0008777") AnnotationAssertion(rdfs:label "hypaxial musculature") AnnotationAssertion(rdfs:seeAlso "https://github.com/obophenotype/uberon/issues/686"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "XAO"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (epaxial musculature) AnnotationAssertion(Annotation( ) Annotation( ) "Musculature that is derived from the epaxial myotome region, ventral to the horizontal septum of the vertebrae. Epaxial muscles include other (dorsal) muscles associated with the vertebrae, ribs, and base of the skull.") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0000142") Annotation( "AAO"^^xsd:string) Annotation( "XAO:curator") "Trunk muscles that lies dorsal to the horizontal septum.[AAO]") AnnotationAssertion(Annotation( "MP:0004248,PMID:1591996") "the muscles derived from the medial myotome; includes the intrinsic back muscles") AnnotationAssertion( "In humans, the erector spinae, the transversospinal muscles (including the multifidus, semispinalis and rotatores), the splenius and suboccipital muscles are the only epaxial muscles") AnnotationAssertion(Annotation( "WP"^^xsd:string) "The hypaxial muscles are located on the lower side of the body, often below the horizontal septum in many species (primarily fish and amphibians). In amniotes, the positional distinctions have been lost as the body's muscles have changed through evolution, but in all species, the hypaxial muscles are innervated by the ventral ramus of the spinal nerves, while the epaxial muscles are innervated by the dorsal ramus.") AnnotationAssertion( "AAO:0000142") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37851") AnnotationAssertion( "XAO:0003229") AnnotationAssertion(Annotation( ) "epaxial muscles") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "XAO:0003229") "epaxial muscle") AnnotationAssertion( "UBERON:0008778") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "epaxial musculature") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "XAO"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (subclavius) AnnotationAssertion(Annotation( ) "The Subclavius is a small triangular muscle, placed between the clavicle and the first rib. Along with the pectoralis major and pectoralis minor muscles, the subclavius muscle makes up the anterior wall of the axilla.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:13410") AnnotationAssertion( "NCIT:C33644") AnnotationAssertion(Annotation( "ncithesaurus:Subclavius") "UMLS:C0224348") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "musculus subclavius") AnnotationAssertion(Annotation( ) "subclavicular muscle") AnnotationAssertion( "UBERON:0008779") AnnotationAssertion(rdfs:label "subclavius") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/a/a2/Gray411subclavius.png"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ) SubClassOf(Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "subclavian groove of clavicle") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (inner cell mass derived epiblast) AnnotationAssertion(Annotation( "MP:0003886") "An embryonic structure that is derived from the inner cell mass and lies above the hypoblast and gives rise to the three primary germ layers.") AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0000444") AnnotationAssertion( "EHDAA:42") AnnotationAssertion( "EHDAA:75") AnnotationAssertion( "EMAPA:16050") AnnotationAssertion( "NCIT:C34164") AnnotationAssertion(Annotation( "ncithesaurus:Epiblast") "UMLS:C1516906") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "MP:0003886") "embryonic epiblast") AnnotationAssertion( "UBERON:0008780") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "The epiblast cells (appearing on day 8 of human embryonic development) make up a columnar epithelium with dense microvilli on the apical surface. During gastrulation, the epiblast cells undergo epithelial-to-mesenchymal transition and delaminate to become the loose mesenchyme of the primitive streak. The epiblast is present in postimplantation mouse embryos between E5.5-E7.5.") AnnotationAssertion(rdfs:label "inner cell mass derived epiblast") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "Wikipedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (blastodisc derived epiblast) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An epiblast (generic) that develops_from a blastodisc.") AnnotationAssertion( ) AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0000018") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "The outer of the two layers of the blastoderm that form during gastrulation, corresponding to primitive ectoderm during gastrulation and to the definitive ectoderm after gastrulation. Kimmel et al, 1995.[TAO]") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0000018") Annotation( "TAO"^^xsd:string) "relationship type change: subclass embryonic structure (VSAO:0000178) CHANGED TO: develops_from embryonic structure (UBERON:0002050)[TAO]") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0000018") Annotation( "TAO"^^xsd:string) "relationship type change: subclass embryonic structure (VSAO:0000178) CHANGED TO: part_of embryonic structure (UBERON:0002050)[TAO]") AnnotationAssertion(Annotation( "BTO"^^xsd:string) "part of blastodisc in BTO; indirect development in ZFA: df DEL df deep blastomere isa blastomere po blastodisc") AnnotationAssertion( "TAO:0000018") AnnotationAssertion( "ZFA:0000018") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0008781") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "blastodisc derived epiblast") SubClassOf( ) SubClassOf(Annotation( "ZFA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "Wikipedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (dorsal venous arch) AnnotationAssertion(Annotation( ) "The dorsal venous arch of the foot is a superficial vein that connects the small saphenous vein and the great saphenous vein. Anatomically, it is defined by where the dorsal veins of the first and fifth digit, respectively, meet the great saphenous vein and small saphenous vein.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37521") AnnotationAssertion( "FMA:44356") AnnotationAssertion( "MA:0002110") AnnotationAssertion(Annotation( ) "arcus venosus dorsalis pedis") AnnotationAssertion(Annotation( "FMA:44356") "dorsal venous arch of foot") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "arcus venosus dorsalis pedis") AnnotationAssertion( "UBERON:0008783") AnnotationAssertion(rdfs:label "dorsal venous arch") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/4/4e/Gray581.png"^^xsd:anyURI) SubClassOf(Annotation( "MA"^^xsd:string) ) # Class: (lower limb segment) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A limb segment that is part of a hindlimb.") AnnotationAssertion( "FMA:24877") AnnotationAssertion(Annotation( "FMA:24877") "free lower limb segment") AnnotationAssertion(Annotation( "FMA:24877") "free lower limb subdivision") AnnotationAssertion(Annotation( "FMA:24877") "segment of free lower limb") AnnotationAssertion(Annotation( "FMA:24877") "subdivision of free lower limb") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0008784") AnnotationAssertion(rdfs:label "lower limb segment") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (upper limb segment) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A limb segment that is part of a forelimb.") AnnotationAssertion( "FMA:24876") AnnotationAssertion(Annotation( "FMA:24876") "free upper limb segment") AnnotationAssertion(Annotation( "FMA:24876") "free upper limb subdivision") AnnotationAssertion(Annotation( "FMA:24876") "segment of free upper limb") AnnotationAssertion(Annotation( "FMA:24876") "subdivision of free upper limb") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0008785") AnnotationAssertion(rdfs:label "upper limb segment") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (third trochanter) AnnotationAssertion(Annotation( ) "The upper part of the gluteal tuberosity is often elongated into a roughened crest, on which a more or less well-marked, rounded tubercle, the third trochanter, is occasionally developed.") AnnotationAssertion( "underdeveloped / not present in humans") AnnotationAssertion( ) AnnotationAssertion( "FMA:75824") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "trochanter tertius") AnnotationAssertion( "UBERON:0008786") AnnotationAssertion(rdfs:label "third trochanter") AnnotationAssertion( "Third:trochanter-tweaked.png"^^xsd:anyURI) SubClassOf(Annotation( "Wikipedia"^^xsd:string) ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (posterior cranial fossa) AnnotationAssertion(Annotation( ) Annotation( "MESH:A01.456.830.200") "The infratentorial compartment that contains the CEREBELLUM and BRAIN STEM. It is formed by the posterior third of the superior surface of the body of the sphenoid (SPHENOID BONE), by the occipital, the petrous, and mastoid portions of the TEMPORAL BONE, and the posterior inferior angle of the PARIETAL BONE.") AnnotationAssertion(Annotation( "ncithesaurus:Posterior") "posterior fossa") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "CALOHA:TS-2354") AnnotationAssertion( "FMA:54368") AnnotationAssertion( "GAID:85") AnnotationAssertion( "MESH:D003388") AnnotationAssertion( "NCIT:C33361") AnnotationAssertion(Annotation( "ncithesaurus:Posterior_Fossa") "UMLS:C0010265") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "fossa cranii posterior") AnnotationAssertion( "UBERON:0008788") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "posterior cranial fossa") AnnotationAssertion( "Posterior:fossa.png"^^xsd:anyURI) SubClassOf( ) # Class: (cranial fossa) AnnotationAssertion(Annotation( ) "Any of the three large depressions in the posterior, middle, and anterior aspects of the floor of the cranial cavity.") AnnotationAssertion( "todo - review the relationships for this and its subclasses; the relation should be bounded rather than part of, and contains should be used for the brain parts contained by the fossae") AnnotationAssertion( "FMA:321144") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0008789") AnnotationAssertion(rdfs:label "cranial fossa") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (rugal fold) AnnotationAssertion(Annotation( ) Annotation( ) "A ridge or fold, such as the rugae of the stomach, which are large folds in the mucous membrane of that organ.") AnnotationAssertion( "As currently defined this encompasses only mucuous membranes, and not for example rugal folds of skin such as the scrotal rugae") AnnotationAssertion( ) AnnotationAssertion(Annotation( ) "ruga") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "rugae") AnnotationAssertion( "UBERON:0008790") AnnotationAssertion(rdfs:label "rugal fold") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (rugal fold of stomach) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A rugal fold that is part of a stomach.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:15106") AnnotationAssertion( "NCIT:C32660") AnnotationAssertion(Annotation( "ncithesaurus:Gastric_Rugae") "UMLS:C0227199") AnnotationAssertion(Annotation( "FMA:15106") "gastric ruga") AnnotationAssertion(Annotation( "FMA:15106") Annotation( ) "gastric rugae") AnnotationAssertion(Annotation( "FMA:15106") "ruga of stomach") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:15106") "gastric ruga(e)") AnnotationAssertion( "UBERON:0008791") AnnotationAssertion(rdfs:label "rugal fold of stomach") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (rugal fold of vagina) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A rugal fold that is part of a vagina.") AnnotationAssertion( "FMA:19991") AnnotationAssertion(Annotation( "FMA:19991") "ruga of vagina") AnnotationAssertion(Annotation( "FMA:19991") "vaginal ruga") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0008798") AnnotationAssertion(rdfs:label "rugal fold of vagina") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (transverse palatine fold) AnnotationAssertion(Annotation( "MP:0009652") "Any of the the series of transverse folds (ridges) of the mucosa located on the anterior third part of the secondary (hard) palate of most mammalian species.") AnnotationAssertion(Annotation( ) "A masticatory vestige on the hard palate; one of several irregular, sometimes branching, crests of soft tissue that radiate from the region of the incisive papillae at their most anterior parts and extend a slight distance backward, crossing the hard palate and reaching laterally for variable distances.") AnnotationAssertion( "rugae are present on each side of the median palatal raphe and behind the incisive papillae, but their number and arrangement are species specific; together with the teeth and the tongue, rugae take part in mastication by helping to sense, hold and mash the food; rugae harbor various types of intraepithelial sensory structures (such as Merckel cells, corpuscular endings and free nerve endings), and play a sensory role when the food is pressed by the tongue against the hard palate[MP]") AnnotationAssertion(Annotation( "FMA"^^xsd:string) "this class refers to the singular and the FMA class refers to the set. In future this class may be split.") AnnotationAssertion( "EMAPA:35638") AnnotationAssertion( "FMA:75652") AnnotationAssertion(Annotation( "EMAPA:35638") Annotation( ) "hard palate palatal rugae") AnnotationAssertion( "hard palate ruga") AnnotationAssertion(Annotation( ) Annotation( ) "impressiones rugales") AnnotationAssertion(Annotation( "MP:0009652") "palatal rugae") AnnotationAssertion(Annotation( "FMA:75652") "palatine fold") AnnotationAssertion(Annotation( "FMA:75652") Annotation( ) "palatine rugae") AnnotationAssertion(Annotation( ) "plica palatina transversa") AnnotationAssertion(Annotation( "FMA:75652") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "plicae palatinae transversae") AnnotationAssertion(Annotation( ) "ruga of palate") AnnotationAssertion(Annotation( ) "ruga palatina") AnnotationAssertion(Annotation( ) Annotation( ) "rugae of palate") AnnotationAssertion(Annotation( "FMA:75652") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "rugae palatinae") AnnotationAssertion(Annotation( "FMA:75652") Annotation( ) "transverse palatine folds") AnnotationAssertion(Annotation( "FMA:75652") Annotation( ) "transverse palatine folds set") AnnotationAssertion(Annotation( ) "transverse palatine ridge") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:75652") "set of transverse palatine folds") AnnotationAssertion( "UBERON:0008799") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "transverse palatine fold") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (parietal endoderm) AnnotationAssertion(Annotation( ) Annotation( "MP:0011187") "Primitive endoderm-derived tissue that lines the luminal surface of the mural trophectoderm[MP].") AnnotationAssertion( "EMAPA:16053") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "EMAPA:16053") "distal endoderm") AnnotationAssertion( "UBERON:0008800") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "parietal endoderm") SubClassOf( ) SubClassOf(Annotation( "cjm"^^xsd:string) ) SubClassOf(Annotation( "MP"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (parotid gland primordium) AnnotationAssertion( "EHDAA2:0001413") AnnotationAssertion( "EHDAA:9246") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0008801") AnnotationAssertion(rdfs:label "parotid gland primordium") SubClassOf(Annotation( "Obol") ) # Class: (cheek pouch) AnnotationAssertion(Annotation( "BTO:0002224") "A pocketlike fold of skin in the cheeks of various animals, such as squirrels, gophers, and monkeys, that functions as a means of carrying food.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0002224") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37452") AnnotationAssertion( "MA:0003059") AnnotationAssertion( "NCIT:C111156") AnnotationAssertion( "buccal pouch") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0008802") AnnotationAssertion(rdfs:label "cheek pouch") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (skin of cheek) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A zone of skin that is part of a cheek.") AnnotationAssertion( ) AnnotationAssertion( "FMA:24759") AnnotationAssertion(Annotation( "FMA:24759") "cheek skin") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0008803") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "skin of cheek") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (stylopharyngeus muscle) AnnotationAssertion(Annotation( ) "The stylopharyngeus is a muscle in the head that stretches between the styloid process and the pharynx.") AnnotationAssertion(Annotation( "2012-07-02"^^xsd:string) Annotation( "FEED"^^xsd:string) Annotation( "http://www.feedexp.org"^^xsd:string) "The stylopharyngeus is a pharyngeal arch III muscle that participates in oral/pharyngeal behaviors and is innervated by the n. to stylopharyngeus branch of the glossopharyngeal n. and attaches to the hyoid apparatus and the pharynx.[FEED]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:46664") AnnotationAssertion( "NCIT:C33639") AnnotationAssertion(Annotation( "ncithesaurus:Stylopharyngeus") "UMLS:C1522014") AnnotationAssertion(Annotation( ) "stylopharyngeus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "M. stylopharyngeus") AnnotationAssertion(Annotation( ) "musculus stylopharyngeus") AnnotationAssertion(Annotation( ) Annotation( ) "musculus stylopharyngeus") AnnotationAssertion( "UBERON:0008804") AnnotationAssertion(rdfs:label "stylopharyngeus muscle") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/5/59/Musculusstylopharyngeus.png"^^xsd:anyURI) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA-abduced-lr"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "Wikipedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "thyroid cartilage") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (gingival groove) AnnotationAssertion(Annotation( ) "The gingival sulcus is an area of potential space between a tooth and the surrounding gingival tissue and is lined by sulcular epithelium. The depth of the sulcus (Latin for groove) is bounded by two entities: apically by the gingival fibers of the connective tissue attachment and coronally by the free gingival margin.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:74580") AnnotationAssertion( "NCIT:C114645") AnnotationAssertion(Annotation( "FMA:74580") "gingival sulcus") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) Annotation( ) "sulcus gingivalis") AnnotationAssertion( "tooth-gingiva interface") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "sulcus gingivalis") AnnotationAssertion( "UBERON:0008805") AnnotationAssertion(rdfs:label "gingival groove") AnnotationAssertion( "Gingival:sulcus.PNG"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (coagulating gland) AnnotationAssertion(Annotation( ) Annotation( ) Annotation( ) Annotation( "MP:0002771") "A lobe of the prostate in rodents that is thin and tubular and is attached to the lesser curvature of the paired seminal vesicles. Secretes substances that contribute to the formation of the copulatory plug.") AnnotationAssertion( "In rodents, the prostate gland consists of three lobes, the anterior prostate (AP; also known as the coagulating gland), the dorsolateral prostate (DLP), and the ventral prostate (VP). These lobes are arranged circumferentially around the urethra and display characteristic patterns of ductal branching and protein secretion (PMID:3308446). In contrast, the adult human prostate lacks discernible lobular organization and, instead, completely envelops the urethra at the base of the bladder (PMID:3308446).[MP]") AnnotationAssertion( ) AnnotationAssertion( "BTO:0000265") AnnotationAssertion( "EMAPA:29794") AnnotationAssertion( "MA:0000402") AnnotationAssertion( "NCIT:C77618") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "EMAPA:29794") "anterior prostate gland") AnnotationAssertion(Annotation( "MA:0000402") Annotation( "MP:0002771") "prostate gland anterior lobe") AnnotationAssertion( "UBERON:0008807") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "coagulating gland") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "MA") Annotation( "EMAPA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (prostate gland dorsolateral lobe) AnnotationAssertion(Annotation( ) Annotation( ) Annotation( "MP:0009381") "The rodent prostate lobe that lies in the triangular area between urethra and seminal vesicle.") AnnotationAssertion( "BTO:0000541") AnnotationAssertion( "EMAPA:35710") AnnotationAssertion( "MA:0001739") AnnotationAssertion( "uberon") AnnotationAssertion( "dorsolateral prostate") AnnotationAssertion( "UBERON:0008808") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "prostate gland dorsolateral lobe") SubClassOf(Annotation( "MA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (foramina of scarpa) AnnotationAssertion(Annotation( ) "In the maxilla, occasionally two additional canals are present in the middle line of the palatine process; they are termed the foramina of Scarpa, and when present transmit the nasopalatine nerves, the left passing through the anterior, and the right through the posterior canal.") AnnotationAssertion( ) AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "foramina of scarpa") AnnotationAssertion( "UBERON:0008809") AnnotationAssertion(rdfs:label "foramina of scarpa") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/4/4a/Gray160.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (nasopalatine nerve) AnnotationAssertion(Annotation( ) Annotation( "UBERON:cjm"^^xsd:string) "A branch of that maxillary nerve that innervates the mucous membrane of the hard palate.") AnnotationAssertion( ) AnnotationAssertion( "BAMS:npal") AnnotationAssertion( "FMA:52797") AnnotationAssertion(Annotation( "FMA:52797") "Scarpa's nerve") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "naso-palatine nerve") AnnotationAssertion(Annotation( ) "nasopalatine") AnnotationAssertion(Annotation( ) "nasopalatine nerves") AnnotationAssertion(Annotation( ) Annotation( ) "nervus nasopalatinus") AnnotationAssertion( "UBERON:0008810") AnnotationAssertion(rdfs:label "nasopalatine nerve") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/d/d1/Gray858.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (intromittent organ) AnnotationAssertion(Annotation( ) "An external organ of a male organism that is specialized to deliver sperm during copulation. Intromittent organs are found most often in terrestrial species, as most aquatic species fertilize their eggs externally, although there are exceptions[WP].") AnnotationAssertion( "this is a broad grouping class connecting a number of different analagous organs by their function. We place the insect aedeagus here rather than penis, although this is somewhat arbitrary given the broadness of the current definition") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0002036") Annotation( "TAO"^^xsd:string) Annotation( "TAO:wd"^^xsd:string) "Surface structure that is an external structure of a male organism through which sperm is transferred to a female organism during mating.[TAO]") AnnotationAssertion( ) AnnotationAssertion( "AAO:0010255") AnnotationAssertion( "FBbt:00004850") AnnotationAssertion( "HAO:0000091") AnnotationAssertion( "TAO:0002036") AnnotationAssertion( "TGMA:0000585") AnnotationAssertion(Annotation( "FBbt:00004850") Annotation( ) "aedeagus") AnnotationAssertion( "penis") AnnotationAssertion( "uberon") AnnotationAssertion( "copulatory organ") AnnotationAssertion( "UBERON:0008811") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "intromittent organ") SubClassOf( ) # Class: (helicotrema) AnnotationAssertion(Annotation( ) "The part of the cochlear labyrinth where the scala tympani and the scala vestibuli meet. It is the main component of the cochlear apex. The hair cells in this area best detect low frequency sounds.") AnnotationAssertion(Annotation( ) "apex of cochlea") AnnotationAssertion(Annotation( ) "cochlear apex") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:61275") AnnotationAssertion( "NCIT:C32723") AnnotationAssertion(Annotation( "ncithesaurus:Helicotrema") "UMLS:C0229512") AnnotationAssertion(Annotation( "FMA:61275") "Scarpa's orifice") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0008813") AnnotationAssertion(rdfs:label "helicotrema") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/1/19/Gray923.png"^^xsd:anyURI) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "Wikipedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (pharyngeal arch system) AnnotationAssertion(Annotation( "GO:0060037") Annotation( "GOC:dph") "A transient embryonic complex that comprises the pharyngeal arches, bulges of tissues of mesoderm and neural crest derivation through which pass nerves and pharyngeal arch arteries. The arches are separated internally by pharyngeal pouches, evaginations of foregut endoderm, and externally by pharyngeal clefts, invaginations of surface ectoderm. The development of the system ends when the stucture it contributes to are forming, which may include (depending on species) the thymus, thyroid, parathyroids, maxilla, mandible, aortic arch, cardiac outflow tract, external and middle ear[GO,modified].") AnnotationAssertion( "Currently defined in a vertebrate specific manner. The arch system has origins in basal deuterostomes, consider generalizing") AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0000187") AnnotationAssertion( "FMA:293041") AnnotationAssertion( "NCIT:C34248") AnnotationAssertion(Annotation( "ncithesaurus:Pharyngeal_Apparatus") "UMLS:C1519038") AnnotationAssertion( "embryonic pharyngeal complex") AnnotationAssertion( "pharyngeal apparatus") AnnotationAssertion(Annotation( "GO:0060037") "pharyngeal system") AnnotationAssertion( "uberon") AnnotationAssertion( "pharyngeal arch complex") AnnotationAssertion(Annotation( "EHDAA2:0000187") "pharyngeal arch region") AnnotationAssertion( "pharyngeal arches and clefts") AnnotationAssertion( "pharyngeal complex") AnnotationAssertion( "UBERON:0008814") AnnotationAssertion(rdfs:label "pharyngeal arch system") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (embryonic head) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A head that is part of a embryo.") AnnotationAssertion( "CALOHA:TS-0246") AnnotationAssertion( "FBbt:00000155") AnnotationAssertion( "FMA:293011") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0008816") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "embryonic head") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (thymus primordium endoderm) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An endoderm that is part of a thymus primordium.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0008817") AnnotationAssertion(rdfs:label "thymus primordium endoderm") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (superior mediastinum) AnnotationAssertion(Annotation( ) "The superior mediastinum is that portion of the interpleural space which lies between the manubrium sterni in front, and the upper thoracic vertebrae behind.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:9827") AnnotationAssertion( "NCIT:C33684") AnnotationAssertion(Annotation( "ncithesaurus:Superior_Mediastinum") "UMLS:C0230147") AnnotationAssertion(Annotation( "FMA:9827") "superior mediastinal part of chest") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "mediastinum superius") AnnotationAssertion( "UBERON:0008818") AnnotationAssertion(rdfs:label "superior mediastinum") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/a/ab/Mediastinum.png"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (inferior mediastinum) AnnotationAssertion(Annotation( ) "Anterior, middle and posterior mediastinum.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:9828") AnnotationAssertion(Annotation( "FMA:9828") "inferior mediastinal part of chest") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0008819") AnnotationAssertion(rdfs:label "inferior mediastinum") SubClassOf( ) SubClassOf(Annotation( "FMA-propagated") ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (anterior mediastinum) AnnotationAssertion(Annotation( ) "The anterior mediastinum exists only on the left side where the left pleura diverges from the mid-sternal line. It is narrow, above, but widens out a little below.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:9838") AnnotationAssertion( "NCIT:C32098") AnnotationAssertion(Annotation( "ncithesaurus:Anterior_Mediastinum") "UMLS:C0230148") AnnotationAssertion(Annotation( "FMA:9838") "anterior mediastinal part of chest") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "mediastinum anterius") AnnotationAssertion( "UBERON:0008820") AnnotationAssertion(rdfs:label "anterior mediastinum") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/a/ab/Mediastinum.png"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) DisjointClasses(Annotation( "lexical"^^xsd:string) ) # Class: (middle mediastinum) AnnotationAssertion(Annotation( ) "The middle mediastinum is the broadest part of the interpleural space. It is made up of the pericardial sac and its contents.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:9839") AnnotationAssertion( "NCIT:C33123") AnnotationAssertion(Annotation( "ncithesaurus:Middle_Mediastinum") "UMLS:C0230149") AnnotationAssertion(Annotation( "FMA:9839") "middle mediastinal part of chest") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "mediastinum medium") AnnotationAssertion( "UBERON:0008821") AnnotationAssertion(rdfs:label "middle mediastinum") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/a/ab/Mediastinum.png"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (posterior mediastinum) AnnotationAssertion(Annotation( ) "The posterior mediastinum is an irregular triangular space running parallel with the vertebral column.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:9840") AnnotationAssertion( "NCIT:C33368") AnnotationAssertion(Annotation( "ncithesaurus:Posterior_Mediastinum") "UMLS:C0230150") AnnotationAssertion(Annotation( "FMA:9840") "posterior mediastinal part of chest") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "mediastinum posterius") AnnotationAssertion( "UBERON:0008822") AnnotationAssertion(rdfs:label "posterior mediastinum") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/a/ab/Mediastinum.png"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (neural tube derived brain) AnnotationAssertion(Annotation( ) Annotation( "OBOL:automatic"^^xsd:string) "A brain that develops_from a neural tube.") AnnotationAssertion( "a reasoner should automatically classify all the vertebrate ontology brain classes here") AnnotationAssertion( "vertebrate brain") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0008823") AnnotationAssertion(rdfs:label "neural tube derived brain") AnnotationAssertion(rdfs:seeAlso "https://github.com/obophenotype/uberon/issues/338"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (duct of epididymis) AnnotationAssertion(Annotation( ) "Any duct branching of of the main epididymis duct.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:36525") AnnotationAssertion( "FMA:18297") AnnotationAssertion( "MA:0001735") AnnotationAssertion( "NCIT:C32484") AnnotationAssertion(Annotation( "ncithesaurus:Duct_of_the_Epididymis") "UMLS:C0458632") AnnotationAssertion(Annotation( "MA:0001735") "epididymal duct") AnnotationAssertion(Annotation( "FMA:18297") "epididymis duct") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0008824") AnnotationAssertion(rdfs:label "duct of epididymis") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pulmonary surfactant) AnnotationAssertion(Annotation( ) "A substance formed by type II alveolar cells composed of surface-active lipoprotein complex (phospholipoprotein).") AnnotationAssertion( "surfactant") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:36551") AnnotationAssertion( "FMA:62780") AnnotationAssertion( "MA:0002534") AnnotationAssertion( "NCIT:C13273") AnnotationAssertion(Annotation( "ncithesaurus:Lung_Surfactant") "UMLS:C0034085") AnnotationAssertion(Annotation( "FMA:62780") "alveolar surfactant") AnnotationAssertion(Annotation( "MA:0002534") "lung surfactant") AnnotationAssertion( "type II pneumocyte secretion") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0008826") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "pulmonary surfactant") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (murine forestomach) AnnotationAssertion(Annotation( "MGI:anna"^^xsd:string) Annotation( "MP:0010784") "A distinct rodent non-glandular region of the stomach which is demarcated from the glandular stomach by the limiting ridge (margo plicatus).") AnnotationAssertion( "consider merging with stomach non-glandular region") AnnotationAssertion( "Non-glandular portion of the stomach of some mammals that is connected to the esophagus. It is utilized as a holding chamber during digestion for un-digested and partially digested food.") AnnotationAssertion(Annotation( ) "The mouse stomach contains two well-defined areas, a (nonglandular) forestomach and a glandular stomach, which are separated by the limiting ridge (margo plicatus)[http://ctrgenpath.net/static/atlas/mousehistology/Windows/digestive/forestomach.html].") AnnotationAssertion( "This class is based on the murine structure. Other groups, such as cetaceans, also have a forestomach (which is essentially an enlargement of the esophagus)") AnnotationAssertion( "the forestomach accounts for about 60% (rat) and 70% (mouse) of the stomach volume and receives the esophagus at the cardiac antrum; the wall of the forestomach consists of, from inside to outside, stratified squamous epithelium, the lamina propria (epithelium and lamina propria form the mucosa), the muscularis mucosae, the submucosa, the muscularis interna and externa (inner circular and outer longitudinal layers of smooth muscle), and the serosa") AnnotationAssertion( "forestomach") AnnotationAssertion(Annotation( "MGI:anna"^^xsd:string) "stomach non-glandular region") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:17627") AnnotationAssertion( "MA:0001606") AnnotationAssertion( "NCIT:C77956") AnnotationAssertion(Annotation( "ncithesaurus:Forestomach") "UMLS:C0033745") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "MGI:anna"^^xsd:string) "anterior stomach") AnnotationAssertion(Annotation( "MGI:anna"^^xsd:string) Annotation( ) "antrum cardiacum") AnnotationAssertion(Annotation( "MGI:anna"^^xsd:string) "proximal stomach") AnnotationAssertion( "UBERON:0008827") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "murine forestomach") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (presphenoid bone) AnnotationAssertion(Annotation( ) Annotation( ) "The anterior part of the body of the sphenoid bone in front of the basisphenoid. It is usually a separate bone in the young or fetus, but becomes a part of the sphenoid in the adult.") AnnotationAssertion( "TODO - account for developmental change") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:36616") AnnotationAssertion( "FMA:321632") AnnotationAssertion( "MA:0001470") AnnotationAssertion( "presphenoidal bone") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0008828") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "presphenoid bone") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "MA"^^xsd:string) ) SubClassOf(Annotation( "MA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "ISBN:0073040584"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (cerebellum external granule cell layer) AnnotationAssertion(Annotation( ) Annotation( "MP:0000874") "Transient layer of the cerebellar cortex present during development which is composed of dividing and migrating granule cells[MP].") AnnotationAssertion(Annotation( "MGI:tc") "The transient layer of the cerebellar cortex present during development which is composed of the dividing and migrating granule cell[MGI:tc]") AnnotationAssertion( "The granule neurons migrate from the exterior layer to form an inner layer known as the internal granule layer. The external granular layer ceases to exist in the mature cerebellum, leaving only granule cells in the internal granule layer[WP]") AnnotationAssertion( "external granule layer") AnnotationAssertion(Annotation( "MP:0000872") "granule cell layer") AnnotationAssertion(Annotation( "MP:0000872") "granule layer") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:797") AnnotationAssertion( "EMAPA:35216") AnnotationAssertion( "MA:0000994") AnnotationAssertion(Annotation( "BIRNLEX:797") "UMLS:C0228473") AnnotationAssertion(Annotation( "BIRNLEX:797") "UMLS:C1289480") AnnotationAssertion(Annotation( "BIRNLEX:797") "outer granular layer of cerebellar cortex") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0008829") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "cerebellum external granule cell layer") SubClassOf(Annotation( "MA"^^xsd:string) ) # Class: (cerebellum internal granule cell layer) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:790") AnnotationAssertion( "EMAPA:35219") AnnotationAssertion( "MA:0000995") AnnotationAssertion( "NCIT:C49141") AnnotationAssertion(Annotation( "BIRNLEX:790") "UMLS:C0228471") AnnotationAssertion(Annotation( "BIRNLEX:790") "UMLS:C1289476") AnnotationAssertion(Annotation( "ncithesaurus:Internal_Granular_Layer_of_the_Cerebellum") "UMLS:C1708540") AnnotationAssertion(Annotation( "BIRNLEX:790") "inner granular layer of cerebellar cortex") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0008830") AnnotationAssertion(rdfs:label "cerebellum internal granule cell layer") SubClassOf(Annotation( "MA"^^xsd:string) ) # Class: (inner spiral sulcus) AnnotationAssertion(Annotation( ) "A concavity in the floor of the cochlear duct formed by the overhanging vestibular lip.") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:35438") AnnotationAssertion( "FMA:77850") AnnotationAssertion( "MA:0001197") AnnotationAssertion(Annotation( "MA:0001197") "internal spiral sulcus") AnnotationAssertion(Annotation( ) "sulcus spiralis internus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0008831") AnnotationAssertion(rdfs:comment "part_of spiral sulcus in MA") AnnotationAssertion(rdfs:label "inner spiral sulcus") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (outer spiral sulcus) AnnotationAssertion(Annotation( ) "A concavity in the outer wall of the cochlear duct between the spiral prominence and the spiral organ.") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:35332") AnnotationAssertion( "FMA:77851") AnnotationAssertion( "MA:0001196") AnnotationAssertion(Annotation( "MA:0001196") "external spiral sulcus") AnnotationAssertion(Annotation( ) "sulcus spiralis externus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0008832") AnnotationAssertion(rdfs:comment "part_of spiral sulcus in MA") AnnotationAssertion(rdfs:label "outer spiral sulcus") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (great auricular nerve) AnnotationAssertion(Annotation( ) Annotation( ) "A nerve arising from the second and third cervical nerves from the cervical plexus and innervating the skin over the parotid gland, the skin of part of the ear, the adjacent portion of the scalp, cheek, and angle of the jaw.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:6872") AnnotationAssertion(Annotation( ) Annotation( ) "nervus auricularis magnus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "great auricular") AnnotationAssertion(Annotation( ) "greater auricular nerve") AnnotationAssertion( "UBERON:0008833") AnnotationAssertion(rdfs:label "great auricular nerve") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/d/dc/Gray805.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA"^^xsd:string) Annotation( "Wikipedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (hepatic diverticulum) AnnotationAssertion(Annotation( ) Annotation( "MP:MP"^^xsd:string) "An out-pocket of thickened ventral foregut epithelium adjacent to the developing heart. Constitutes the first morphological sign of the embryonic liver. The anterior portion of the hepatic diverticulum gives rise to the liver and intrahepatic biliary tree, while the posterior portion forms the gall bladder and extrahepatic bile ducts.") AnnotationAssertion( "in mice, the hepatic diverticulum forms by E9 and expands into an obvious liver bud by E10") AnnotationAssertion( "The caudal part of the septum transversum is invaded by the hepatic diverticulum which divides within it to form the liver and thus gives rise to the ventral mesentery of the foregut.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0011057") AnnotationAssertion( "EHDAA2:0000740") AnnotationAssertion( "EHDAA:1530") AnnotationAssertion( "NCIT:C34187") AnnotationAssertion(Annotation( "ncithesaurus:Hepatic_Diverticulum") "UMLS:C1512407") AnnotationAssertion( "XAO:0000101") AnnotationAssertion(Annotation( "XAO:0000101") "liver diverticulum") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "diverticulum hepaticum") AnnotationAssertion( "UBERON:0008835") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "hepatic diverticulum") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/4/4f/Gray1088.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "caudal part") Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (liver bud) AnnotationAssertion( "BTO:0001642") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0008836") AnnotationAssertion(rdfs:label "liver bud") SubClassOf( ) SubClassOf(Annotation( "cjm"^^xsd:string) ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (palmar/plantar part of autopod) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0008837") AnnotationAssertion(rdfs:label "palmar/plantar part of autopod") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (metapodial pad) AnnotationAssertion(Annotation( "ncithesaurus:Footpad") "A thick, spongy layer of tissue located under the metacarpal and metatarsal joints of the autopod.") AnnotationAssertion( "check synonyms - re footpad") AnnotationAssertion( "MA:0003010") AnnotationAssertion( "NCIT:C92654") AnnotationAssertion( "uberon") AnnotationAssertion( "foot pad") AnnotationAssertion(Annotation( "MA:0003010") "footpad") AnnotationAssertion( "metapodium pad") AnnotationAssertion( "UBERON:0008838") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "metapodial pad") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (palmar pad) AnnotationAssertion(Annotation( ) "An autopod pad that is in the metacarpal region.") AnnotationAssertion(Annotation( "EMAPA"^^xsd:string) "the EMAPA term refers to the plural") AnnotationAssertion( "EMAPA:18489") AnnotationAssertion( "uberon") AnnotationAssertion( "hind foot pad") AnnotationAssertion( "metacarpal foot pad") AnnotationAssertion( "metacarpal pad") AnnotationAssertion(Annotation( "EMAPA:18489") Annotation( ) "palmar pads") AnnotationAssertion( "UBERON:0008839") AnnotationAssertion(rdfs:label "palmar pad") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (plantar pad) AnnotationAssertion(Annotation( ) "An autopod pad that is in the metatarsal region.") AnnotationAssertion(Annotation( "MURDOCH:1334") "The canine metatarsal pad is large and heart-shaped, and functions to cushion the foot. The pad is covered by a naked, densely cornified epidermis, which is usually highly pigmented and is the toughest region of the canine skin. The digital cushion or bulk of the foot pad is composed of a subcutaneous adipose tissue, partitioned by reticular, collagenous and elastic fibres. The subcutis of the canine footpads contains sweat glands embedded in the adipose tissue. The ducts of these glands channel through the thick epidermis of the foot pad. The secretions from these glands function as territorial or trail markers[MURDOCH:1334].") AnnotationAssertion( "EMAPA:18507") AnnotationAssertion( "uberon") AnnotationAssertion( "fore foot pad") AnnotationAssertion( "metatarsal foot pad") AnnotationAssertion( "metatarsal pad") AnnotationAssertion(Annotation( "EMAPA:18507") Annotation( ) "plantar pads") AnnotationAssertion( "UBERON:0008840") AnnotationAssertion(rdfs:label "plantar pad") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EMAPA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (suspensory ligament) AnnotationAssertion(Annotation( ) "A ligament that supports a body part, especially an organ.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0008841") AnnotationAssertion(rdfs:label "suspensory ligament") SubClassOf( ) # Class: (suspensory ligament of testis) AnnotationAssertion(Annotation( ) Annotation( ) "The cranial atrophic portion of the urogenital ridge attached to the cranial pole of the intraabdominal embryonic testis.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "scrotal ligament") AnnotationAssertion( "UBERON:0008842") AnnotationAssertion(rdfs:label "suspensory ligament of testis") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "Obol") ) SubClassOf(Annotation( "Obol") ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (gubernaculum testis) AnnotationAssertion(Annotation( "BTO:0002813") "The fetal ligament attached to the inferior end of the epididymis and testis and, at its other end, to the bottom of the scrotum; it is present during, and is thought to guide, the descent of the testis into the scrotum and then atrophies.") AnnotationAssertion( "The upper part of the gubernaculum degenerates; The lower part persists as the gubernaculum testis ('scrotal ligament'). This ligament secures the testis to the most inferior portion of the scrotum, tethering it in place and limiting the degree to which the testis can move within the scrotum[WP]") AnnotationAssertion(Annotation( "MA:0003248") "gubernaculum") AnnotationAssertion( ) AnnotationAssertion( "BTO:0002813") AnnotationAssertion( "EMAPA:19089") AnnotationAssertion( "FMA:20421") AnnotationAssertion( "MA:0003248") AnnotationAssertion( "male gubernaculum") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0002813") "Hunter's gubernaculum") AnnotationAssertion( "UBERON:0008843") AnnotationAssertion(rdfs:label "gubernaculum testis") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (gubernaculum (female)) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A gubernaculum that is part of a female reproductive system.") AnnotationAssertion( "female gubernaculum") AnnotationAssertion( "uberon") AnnotationAssertion( "gubernaculum ovarii") AnnotationAssertion( "UBERON:0008844") AnnotationAssertion(rdfs:comment "The upper part of the gubernaculum, together with the ovarian artery and vein form the suspensory ligament of the ovary,[1] which suspends the ovary from the pelvic wall.; The lower gubernaculum has two vestigial remnants in females, the ovarian ligament and the round ligament of the uterus (ligamentum teres uteri) which respectively serve to support the ovaries and uterus in the pelvis") AnnotationAssertion(rdfs:label "gubernaculum (female)") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (nonskeletal ligament) AnnotationAssertion(Annotation( ) "A ligament that does not connect two skeletal elements.") AnnotationAssertion(Annotation( "FMA:25625") "Ligament organ that primarily consists of dense connective tissue aggregated into fasciculi which may be admixed with smooth muscle. Examples: ligament of liver, ovarian ligament[FMA:25625].") AnnotationAssertion(Annotation( "FMA"^^xsd:string) "this class is used more generally than the FMA class, to include for example folds of mesentery such as the broad ligament of the uterus.") AnnotationAssertion( ) AnnotationAssertion( "FMA:25625") AnnotationAssertion( "MA:0003004") AnnotationAssertion( "non-skeletal ligament") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "fibrous ligament") AnnotationAssertion( "UBERON:0008845") AnnotationAssertion(rdfs:label "nonskeletal ligament") SubClassOf(Annotation( "cjm"^^xsd:string) ) DisjointClasses( ) # Class: (skeletal ligament) AnnotationAssertion(Annotation( ) Annotation( ) Annotation( "GO_REF:0000034"^^xsd:string) "Dense regular connective tissue connecting two or more adjacent skeletal elements[VSAO,modified].") AnnotationAssertion( "logical definition deliberately made strict to avoid classifying MA:spiral ligament as both nonskeletal and skeletal. see https://github.com/obophenotype/mouse-anatomy-ontology/issues/71") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "VSAO:0000072") Annotation( "VSAO"^^xsd:string) Annotation( "PSPUB:0000170"^^xsd:string) "Dense regular connective tissue connecting two or more adjacent skeletal elements or supporting an organ.[VSAO]") AnnotationAssertion(Annotation( "FMA:25624") "Ligament organ that primarily consists of regular dense connective tissue aggregated into fasciculi; connects bone and cartilage organs. Examples: sutural ligament, ligament of pinna, tarsal ligament[FMA:25624].") AnnotationAssertion(Annotation( "VSAO:0000072") Annotation( "ZFA:0001675") "ligament") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010444") AnnotationAssertion( "AEO:0000090") AnnotationAssertion( "CALOHA:TS-2146") AnnotationAssertion( "EHDAA2:0003232") AnnotationAssertion( "EV:0100144") AnnotationAssertion( "FMA:25624") AnnotationAssertion( "GAID:118") AnnotationAssertion( "MA:0003005") AnnotationAssertion( "VSAO:0000072") AnnotationAssertion(Annotation( ) "articular larua") AnnotationAssertion(Annotation( ) "articular ligament") AnnotationAssertion(Annotation( ) "true ligament") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0008846") AnnotationAssertion(rdfs:label "skeletal ligament") AnnotationAssertion( "Knee:diagram.svg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "AEO"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "AEO"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "bones or cartilage organs") ObjectSomeValuesFrom( )) SubClassOf(Annotation( "VSAO"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (ovarian ligament) AnnotationAssertion(Annotation( ) "A fibrous ligament that connects the ovary to the lateral surface of the uterus.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:55422") AnnotationAssertion(Annotation( "FMA:55422") "ligament of ovary") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) Annotation( ) "ligamentum ovarii proprium") AnnotationAssertion(Annotation( "FMA:55422") "proper ovarian ligament") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0008847") AnnotationAssertion(rdfs:comment "The ligament runs in the broad ligament of the uterus, which is a fold of peritoneum rather than a fibrous ligament. Specifically, it is located in the parametrium") AnnotationAssertion(rdfs:label "ovarian ligament") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "lower gubernaculum") Annotation( "Wikipedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (cranial suspensory ligament) AnnotationAssertion(Annotation( ) "Connects the cranial tip of the future gonad to the dorsocranial abdominal cavity.") AnnotationAssertion( "TODO - check - add cranial ovarian susp ligaments") AnnotationAssertion( "EMAPA:30068") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0008848") AnnotationAssertion(rdfs:label "cranial suspensory ligament") SubClassOf( ) SubClassOf(Annotation( "Obol") ) SubClassOf(Annotation( "EMAPA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (ectoplacental cavity) AnnotationAssertion(Annotation( ) Annotation( "MP:0011207") "Closed space within the ectoplacental cone, formed by the fusion of the parts of the amniotic fold that separate it from the amniotic cavity[MP]. a developmental cavity that exists in some mammals and is derived by division of the proamniotic space; it is further removed from the embryo than the amniotic cavity in some mammals.") AnnotationAssertion( "EMAPA:16080") AnnotationAssertion(Annotation( ) "epamniotic cavity") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "MP:0011207") "epamniotic cavity") AnnotationAssertion( "UBERON:0008851") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "ectoplacental cavity") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (visceral yolk sac) AnnotationAssertion(Annotation( "MP:0001718") "Extraembryonic tissue membrane, formed from the visceral endoderm and the extraembryonic mesoderm, which is located ventral to the embryonic disc and is connected to the presumptive midgut of the embryo; the yolk that it contains is the site of embryonic hematopoiesis and vitelline circulation is involved in early embryonic circulation; it is the origin of the primordial germ cells.") AnnotationAssertion(Annotation( "MP:0001718") "yolk sac") AnnotationAssertion( "FMA:296715") AnnotationAssertion(Annotation( "MP:0001718") "secondary yolk sac") AnnotationAssertion(Annotation( "MP:0001718") "umbilical vesicle") AnnotationAssertion(Annotation( "MP:0001718") "vitelline sac") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0008852") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "visceral yolk sac") SubClassOf( ) # Class: (parietal yolk sac) AnnotationAssertion(Annotation( ) Annotation( ) Annotation( "MP:0011203") "Tissue that consists of two cellular layers (parietal endoderm and trophoblast) separated by a relatively thick nonvascular basement membrane (Reichert's membrane), and acts as a protective layer to supports and facilitates transport of nutrients between the uterine tissue and the yolk sac cavity.") AnnotationAssertion( "EHDAA2:0003237") AnnotationAssertion( "FMA:296713") AnnotationAssertion(Annotation( "MP:0011203") "primary yolk sac") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0008853") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "parietal yolk sac") SubClassOf( ) # Class: (root of molar tooth) AnnotationAssertion(Annotation( "MP:0011165") "The part of a molar tooth that is implanted in the gum; mandibular and maxillary molars usually have two and three roots, respectively.") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37948") AnnotationAssertion( "FMA:85302") AnnotationAssertion(Annotation( "MP:0011166") "molar root") AnnotationAssertion(Annotation( "FMA:85302") "molar tooth root") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0008854") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "root of molar tooth") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (stomach muscularis externa) AnnotationAssertion(Annotation( "MP:0010779") "The smooth muscle layer of the stomach wall that functions to churn and mix food and gastric secretions as well as to move food along the digestive tract to the intestines.") AnnotationAssertion(Annotation( "WP"^^xsd:string) "the muscularis externa in the stomach differs from that of other GI organs in that it has three layers of smooth muscle instead of two") AnnotationAssertion( ) AnnotationAssertion( "FMA:14909") AnnotationAssertion(Annotation( "FMA:14909") "gastric muscularis") AnnotationAssertion(Annotation( "FMA:14909") "muscle layer of stomach") AnnotationAssertion(Annotation( "FMA:14909") "muscularis externa of stomach") AnnotationAssertion(Annotation( "FMA:14909") "tunica muscularis (gaster)") AnnotationAssertion( "tunica muscularis gastris") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0008856") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "stomach muscularis externa") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "MA-abduced") ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (stomach smooth muscle circular layer) AnnotationAssertion(Annotation( "MP:0010780") "The middle layer of the muscularis; it is continuous with the circular layer of the esophagus, but is absent in the fundus and lies concentric to the longitudinal axis of the stomach; the circular layer is normally tonically constricted forming a functional pyloric sphincter, which controls the movement of chyme into the duodenum.") AnnotationAssertion( "This layer wraps in a circular orientation around the pylorus, and is held in a constricted state normally. The normal constriction of this muscle is what creates the pyloric sphincter, which controls the movement of chyme into the duodenum. This layer is concentric to the longitudinal axis of the stomach. (note: chyme is a thick and acidic mixture of acidic digestive fluids and partially digested food, which moves from the stomach to the small intestine as digestion moves along the digestive tract.)") AnnotationAssertion(Annotation( "FMA"^^xsd:string) "FMA and MP disagree as to whether the circular layer is middle or innermost") AnnotationAssertion( ) AnnotationAssertion( "FMA:14911") AnnotationAssertion( "MA:0001628") AnnotationAssertion(Annotation( "FMA:14911") "circular layer of gastric muscularis") AnnotationAssertion(Annotation( "FMA:14911") "circular muscle layer of stomach") AnnotationAssertion( "middle circular muscle layer of stomach") AnnotationAssertion(Annotation( "FMA:14911") "stratum circulare (tunica muscularis)(gaster)") AnnotationAssertion( "stratum circulare gastris") AnnotationAssertion(Annotation( "FMA:14911") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "stratum circulare tunicae muscularis gastricae") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0008857") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "stomach smooth muscle circular layer") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pyloric canal) AnnotationAssertion(Annotation( ) Annotation( "MP:0010791") "The short narrow part of the stomach extending from the pyloric antrum to the pyloric sphincter.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37944") AnnotationAssertion( "FMA:14580") AnnotationAssertion(Annotation( ) "canalis pyloricus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "canalis pyloricus") AnnotationAssertion( "UBERON:0008858") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "pyloric canal") AnnotationAssertion( "Illu:stomach.jpg"^^xsd:anyURI) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf(Annotation( "Wikipedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (cardiac gastric gland) AnnotationAssertion(Annotation( ) Annotation( "MP:0010795") "A gastric gland in the cardiac region of the stomach; cardiac glands are fewer in number than in the fundus and body, and secrete mucin which coats the stomach and protects it[MP].") AnnotationAssertion(Annotation( ) "The cardiac glands of the stomach secrete primarily mucus. They are few in number and occur close to the cardiac orifice where the esophagus joins the stomach. In general, they are more shallow than those in the other parts of the stomach. They are of two kinds: (1) simple tubular glands resembling those of the pyloric end of the stomach, but with short ducts. (2) compound racemose glands resembling the duodenal glands. The cardiac gland is both innervated by the parasympathetic and symapthetic nerve fibres of the autonomic nervous system[Wikipedia:Cardiac_glands].") AnnotationAssertion(Annotation( "FMA"^^xsd:string) "Kardong places this in the glandular epithelium, FMA more generally in the mucosa") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37459") AnnotationAssertion( "FMA:14920") AnnotationAssertion(Annotation( "ISBN:0073040584"^^xsd:string) "gardiac gland") AnnotationAssertion(Annotation( "FMA:14920") "gastric cardiac gland") AnnotationAssertion( "gastric cardiac mucuous gland") AnnotationAssertion(Annotation( "FMA:14920") "gastric gland of cardia") AnnotationAssertion(Annotation( "FMA:14920") "glandula cardiaca (gaster)") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:14920") "cardiac gland") AnnotationAssertion( "UBERON:0008859") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "cardiac gastric gland") SubClassOf( ) SubClassOf(Annotation( "MP"^^xsd:string) ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (intermediate gastric gland) AnnotationAssertion(Annotation( "MP:0010796") "Any of the branched tubular glands in the mucosa of the fundus and body of the stomach that secrete most of the digestive substances secreted by the stomach.") AnnotationAssertion( "todo, check this class") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0008860") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "intermediate gastric gland") SubClassOf( ) # Class: (pyloric gastric gland) AnnotationAssertion(Annotation( ) Annotation( "MP:0010797") "The gastric glands in the pyloric region of the stomach; the pyloric glands secrete mucin, which coats the stomach and protects it, and hormones such as gastrin and enkephalin[MP].") AnnotationAssertion( "check relationship to pylorus vs antrum") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:27211") AnnotationAssertion( "FMA:14922") AnnotationAssertion( "NCIT:C33431") AnnotationAssertion(Annotation( "ncithesaurus:Pyloric_Gland") "UMLS:C0227239") AnnotationAssertion(Annotation( "FMA:14922") "glandula pylorica") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "pyloric antrum gland") AnnotationAssertion(Annotation( "FMA:14922") "pyloric gland") AnnotationAssertion( "pyloric mucuous gland") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0008861") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "pyloric gastric gland") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/b/bf/Gray1054.png"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "MP"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (stomach smooth muscle inner oblique layer) AnnotationAssertion(Annotation( "MP:0010804") "The innermost layer of the muscularis; it is not present in all sections of the stomach but is clearly seen in the fundus and near the lesser curvature of the corpus; the oblique fibers disappear distally (towards the pyloric antrum); the oblique layer is responsible for creating the motion that churns and physically breaks down the food.") AnnotationAssertion( "This layer is responsible for creating the motion that churns and physically breaks down the food. It is the only layer of the three which is not seen in other parts of the digestive system. The antrum has thicker skin cells in its walls and performs more forceful contractions than the fundus") AnnotationAssertion(Annotation( "FMA"^^xsd:string) "FMA and MP disagree as to whether the oblique layer is middle or innermost. WP seems to agree that the oblique is inner") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37965") AnnotationAssertion( "FMA:14912") AnnotationAssertion( "inner oblique muscle layer of stomach") AnnotationAssertion(Annotation( "FMA:14912") "oblique fiber layer of gastric muscularis") AnnotationAssertion(Annotation( "FMA:14912") "oblique muscle layer of stomach") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0008862") AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "The only layer of the three which is not seen in other parts of the digestive system[WP].") AnnotationAssertion(rdfs:label "stomach smooth muscle inner oblique layer") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "MP"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (stomach smooth muscle outer longitudinal layer) AnnotationAssertion(Annotation( ) Annotation( "MP:0010805") "The most superficial layer of the muscularis; it has two sections, a longitudinal layer that is common with the esophagus and ends in the corpus, and a longitudinal layer that originates in the corpus and spreads into the duodenum.") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37966") AnnotationAssertion( "FMA:14910") AnnotationAssertion(Annotation( "FMA:14910") "longitudinal layer of gastric muscularis") AnnotationAssertion( "muscle layer 1 of stomach") AnnotationAssertion( "outer longitudinal muscle layer of stomach") AnnotationAssertion(Annotation( "FMA:14910") Annotation( ) "stratum longitudinale (tunica muscularis)(gaster)") AnnotationAssertion(Annotation( "FMA:14910") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "stratum longitudinale tunicae muscularis gastricae") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0008863") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "stomach smooth muscle outer longitudinal layer") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (enamel knot) AnnotationAssertion(Annotation( "MP:0010864") "A transient cluster of cells in the central part of the dental epithelium facing the dental mesenchyme, which acts as an organizing center, providing positional information for tooth morphogenesis and regulating the growth of tooth cusps.") AnnotationAssertion( "BTO:0005791") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0008866") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "enamel knot") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (trabecular network of bone) AnnotationAssertion(Annotation( "MP:0010867") "The network of intersecting plates and spicules in cancellous bone which form a meshwork of intercommunicating spaces filled with blood vessels and marrow; in mature bone, the trabeculae are aligned in parallel with the lines of major compressive or tensile force.") AnnotationAssertion( "consider revision - we have 3 classes, the tissue itself, the network, and the spaces.") AnnotationAssertion( ) AnnotationAssertion( "NCIT:C82999") AnnotationAssertion(Annotation( "ncithesaurus:Bone_Trabeculae") "UMLS:C2826619") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "MP:0010867") "bone trabecula") AnnotationAssertion(Annotation( "MP:0010867") "bone trabeculae") AnnotationAssertion( "UBERON:0008867") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "trabecular network of bone") SubClassOf( ) SubClassOf(Annotation( "MP"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pulmonary alveolar parenchyma) AnnotationAssertion(Annotation( "MP:0010901") "The distinguishing cell types of the lung alveolar tissue, including pulmonary epithelial cells (pneumocytes), alveolar capillary endothelial cells, interstitial cells (fibroblasts) and alveolar macrophages.") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37942") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0008870") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "pulmonary alveolar parenchyma") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (alveolar pore) AnnotationAssertion(Annotation( "MP:0010904") "The openings in the alveolar septum that permit air flow between adjacent alveoli.") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37391") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0008873") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "alveolar pore") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pulmonary acinus) AnnotationAssertion(Annotation( ) Annotation( "MP:0010911") "The part of the airway consisting of a respiratory bronchiole and all of its branches.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37941") AnnotationAssertion( "FMA:7313") AnnotationAssertion( "NCIT:C33426") AnnotationAssertion(Annotation( "ncithesaurus:Pulmonary_Acinus") "UMLS:C0225696") AnnotationAssertion(Annotation( "FMA:7313") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "acinus pulmonaris") AnnotationAssertion(Annotation( "FMA:7313") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "arbor alveolaris") AnnotationAssertion(Annotation( "FMA:7313") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "lobulus pulmonis primarius") AnnotationAssertion(Annotation( "FMA:7313") "primary pulmonary lobule") AnnotationAssertion( "respiratory lobule") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0008874") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "pulmonary acinus") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (hypodermis skeletal muscle layer) AnnotationAssertion(Annotation( "ISBN:0123813611"^^xsd:string) Annotation( "MP:0011157") "Any skeletal muscle organ in the hypodermis / superficial fascia.") AnnotationAssertion( "We follow MP and treat this as part of the hypodermis, although some sources may consider the hypodermis to be superficial to this") AnnotationAssertion( "UBERON:0010934") AnnotationAssertion( "EMAPA:18188") AnnotationAssertion( "MA:0003140") AnnotationAssertion(Annotation( "MP:0011157") "hypodermal muscle layer") AnnotationAssertion(Annotation( "MP:0011157") "hypodermis muscle layer") AnnotationAssertion( "superficial fascia muscular layer") AnnotationAssertion(Annotation( "MP:0011157") "panniculus carnosus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0008876") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "hypodermis skeletal muscle layer") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "MP-def") ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (epidermal-dermal junction) AnnotationAssertion(Annotation( "MP:0011159") "The multi-layer basement membrane between the dermis and epidermis that serves to adhere the dermis and epidermis, provide mechanical support for the epidermis, and forms a barrier to cells and large molecules across the junction.") AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37866") AnnotationAssertion( "FMA:70963") AnnotationAssertion( "NCIT:C62356") AnnotationAssertion(Annotation( "FMA:70963") "dermal-epidermal junction") AnnotationAssertion( "dermo-epidermal junction") AnnotationAssertion(Annotation( "FMA:70963") "dermoepidermal junction") AnnotationAssertion( "epidermal dermol junction") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0008877") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "epidermal-dermal junction") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "MP"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (palmar part of manus) AnnotationAssertion( ) AnnotationAssertion( "FMA:24920") AnnotationAssertion( "NCIT:C33252") AnnotationAssertion(Annotation( "ncithesaurus:Palmar_Region") "UMLS:C0931849") AnnotationAssertion( "galen:Palm") AnnotationAssertion(Annotation( "FMA:24920") "front of hand") AnnotationAssertion(Annotation( "FMA:24920") "palm") AnnotationAssertion(Annotation( "FMA:24920") "palm of hand") AnnotationAssertion(Annotation( "FMA:24920") "palmar region") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) Annotation( ) "regio palmaris") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0008878") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "palmar part of manus") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ) # Class: (ligament of pinna) AnnotationAssertion( "subclasses (anterior, superior, posterior) can be added on request") AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37434") AnnotationAssertion( "FMA:61035") AnnotationAssertion( "MA:0001228") AnnotationAssertion(Annotation( "MA:0001228") "auricular ligament") AnnotationAssertion(Annotation( "FMA:61035") "ligament of auricle") AnnotationAssertion(Annotation( "FMA:61035") "pinna ligament") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0008879") AnnotationAssertion(rdfs:label "ligament of pinna") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ) SubClassOf(Annotation( "MA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (rostral migratory stream) AnnotationAssertion(Annotation( ) Annotation( "BIRNLEX:1702") "Unique telencephalic subventricular zones that extend from the lateral ventricles into the olfactory bulbs. Newly produced GABAergic interneurons migrate along the RMS and settle in the bulb.") AnnotationAssertion(Annotation( ) "The rostral migratory stream (RMS) or rostral migratory pathway is a pathway, found in the brain of some animals, along which neuronal precursors that originated in the subventricular zone (SVZ) of the brain migrate to reach the main olfactory bulb, where they differentiate into interneurons. Neurogenesis has been shown to occur in the SVZ into adulthood[WP]") AnnotationAssertion(Annotation( "MP:0004279") "The transient structure formed by neurons migrating from the subventricular zone into the olfactory bulb[MP:0004279]s") AnnotationAssertion(Annotation( "BTO"^^xsd:string) "In rodents, the anterior region of the SVZ produces neuroblasts that migrate in chain toward the olfactory bulb along the so-called rostral migratory stream (RMS)") AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:1702") AnnotationAssertion( "BTO:0003412") AnnotationAssertion( "DHBA:10556") AnnotationAssertion( "PBA:128012584") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0003412") Annotation( ) "RMS") AnnotationAssertion(Annotation( ) "rostral migratory pathway") AnnotationAssertion( "UBERON:0008881") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "rostral migratory stream") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "BTO-modified") ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) SubClassOf(Annotation( "MP-modified") ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (spinal cord commissure) AnnotationAssertion(Annotation( "MP:0009694") "The nerve fiber tracts that span the midline of the spinal cord.") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37955") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0008882") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "spinal cord commissure") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (osteoid) AnnotationAssertion(Annotation( ) Annotation( "GO_REF:0000034"^^xsd:string) Annotation( "VSAO:0000046") "Bone tissue that is an unmineralized bone matrix deposited by osteoblasts prior to the mineralization of bone tissue.") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "VSAO:0000046") Annotation( "VSAO"^^xsd:string) Annotation( "GO_REF:0000034, http://dx.plos.org/10.1371/journal.pone.0051070") Annotation( "PSPUB:0000170"^^xsd:string) "Bone tissue that is an unmineralized bone matrix deposited by osteoblasts prior to the mineralization of bone tissue.[VSAO]") AnnotationAssertion(Annotation( "ISBN:0-683-40008-8") Annotation( "MP:0010924") "Newly formed organic bone matrix secreted by osteoblasts, that exists prior to calcification; it is comprised mainly of type I collagen fibers, chondroitin sulfate and osteocalci[ISBN:0-683-40008-8]n") AnnotationAssertion(Annotation( "VSAO") "Note that in VSAO this was classified both as tissue and acellular extracellular matrix. Consider also the AEO class 'bone condensation'. is_a intercellular matrix in FMA.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37923") AnnotationAssertion( "FMA:66830") AnnotationAssertion( "NCIT:C33228") AnnotationAssertion(Annotation( "ncithesaurus:Osteoid") "UMLS:C0682561") AnnotationAssertion( "VSAO:0000046") AnnotationAssertion( "XAO:0004035") AnnotationAssertion( "galen:Osteoid") AnnotationAssertion(Annotation( ) "osteoid tissue") AnnotationAssertion(Annotation( "PSPUB:0000170"^^xsd:string) "pre-bone") AnnotationAssertion(Annotation( "VSAO:curator"^^xsd:string) "prebone") AnnotationAssertion(Annotation( "FMA:66830") Annotation( "MP:0002113") "prebone tissue") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0008883") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "osteoid") AnnotationAssertion( "Active:osteoblasts.jpg"^^xsd:anyURI) SubClassOf(Annotation( "VSAO"^^xsd:string) ) # Class: (left putamen) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A putamen that is part of a left cerebral hemisphere.") AnnotationAssertion( "FMA:72829") AnnotationAssertion( "HBA:4288") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0008884") AnnotationAssertion(rdfs:label "left putamen") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (right putamen) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A putamen that is part of a right cerebral hemisphere.") AnnotationAssertion( "FMA:72828") AnnotationAssertion( "HBA:4289") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0008885") AnnotationAssertion(rdfs:label "right putamen") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pulmonary vascular system) AnnotationAssertion(Annotation( ) Annotation( "ISBN:0073040584"^^xsd:string) "The part of the cardiovascular system consisting of all pulmonary arteries and all pulmonary veins.") AnnotationAssertion(Annotation( "FMA") Annotation( "FMA:45621") "Subdivision of cardiovascular system which has as its parts the pulmonary arterial and venous tree organs.[FMA]") AnnotationAssertion( ) AnnotationAssertion( "FMA:45621") AnnotationAssertion(Annotation( "FMA:45621") "pulmonary circulatory system") AnnotationAssertion(Annotation( "ISBN:0073040584"^^xsd:string) "pulmonary system") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0008886") AnnotationAssertion(rdfs:label "pulmonary vascular system") SubClassOf(Annotation( "Obol") ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (rectal venous plexus) AnnotationAssertion(Annotation( ) "The hemorrhoidal plexus (or rectal venous plexus) surrounds the rectum, and communicates in front with the vesical venous plexus in the male, and the uterovaginal plexus in the female. A free communication between the portal and systemic venous systems is established through the hemorrhoidal plexus.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:18933") AnnotationAssertion( "NCIT:C32728") AnnotationAssertion(Annotation( "ncithesaurus:Hemorrhoidal_Plexus") "UMLS:C0226766") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "haemorrhoidal plexus") AnnotationAssertion(Annotation( ) "hemorrhoidal plexus") AnnotationAssertion(Annotation( ) Annotation( ) "plexus haemorrhoidalis") AnnotationAssertion(Annotation( ) Annotation( ) "plexus venosus rectalis") AnnotationAssertion( "UBERON:0008887") AnnotationAssertion(rdfs:label "rectal venous plexus") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/6/69/Gray587.png"^^xsd:anyURI) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (vesical venous plexus) AnnotationAssertion(Annotation( ) "The vesical plexus envelops the lower part of the bladder and the base of the prostate and communicates with the pudendal and prostatic plexuses. It is drained, by means of several vesical veins, into the hypogastric veins.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:18934") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "plexus venosus vesicalis") AnnotationAssertion( "UBERON:0008888") AnnotationAssertion(rdfs:label "vesical venous plexus") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/b/bd/Gray585.png"^^xsd:anyURI) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (uterine venous plexus) AnnotationAssertion(Annotation( ) "The uterine plexuses lie along the sides and superior angles of the uterus between the two layers of the broad ligament, and communicate with the ovarian and vaginal plexuses. They are drained by a pair of uterine veins on either side: these arise from the lower part of the plexuses, opposite the external orifice of the uterus, and open into the corresponding hypogastric vein.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:29712") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "plexus venosus uterinus") AnnotationAssertion(Annotation( ) "uterine plexus") AnnotationAssertion( "UBERON:0008889") AnnotationAssertion(rdfs:label "uterine venous plexus") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/d/d4/Gray589.png"^^xsd:anyURI) SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (pharyngeal gill precursor) AnnotationAssertion(Annotation( ) "A primordium or bud that develops into a gill.") AnnotationAssertion( "TAO:0001107") AnnotationAssertion( "XAO:0000448") AnnotationAssertion( "ZFA:0001107") AnnotationAssertion(Annotation( "XAO:0000448") "gill primordium") AnnotationAssertion(Annotation( "ZFA:0001107") "internal gill bud") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "XAO:0000448") "external gill anlage") AnnotationAssertion(Annotation( "ZFA:0001107") Annotation( ) "internal gill buds") AnnotationAssertion( "UBERON:0008894") AnnotationAssertion(rdfs:label "pharyngeal gill precursor") SubClassOf(Annotation( "XAO"^^xsd:string) ) SubClassOf(Annotation( "XAO"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "XAO"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "ZFA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (splanchnocranium) AnnotationAssertion(Annotation( ) Annotation( ) Annotation( "ISBN:0073040584"^^xsd:string) "Subdivision of endoskeleton derived from pharyngeal arches.") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0001216") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "Anatomical cluster that is part of the cranium and consists of the jaws, hyoid and branchial arches.[TAO]") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0010157") Annotation( "AAO"^^xsd:string) Annotation( "AAO:EJS"^^xsd:string) "Anatomical cluster that is part of the cranium and consists of the jaws, hyoid, and branchial arches.[AAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000315") Annotation( "VHOG"^^xsd:string) Annotation( ) "The part of the skull derived from the embryonic pharyngeal arches. [Biology_Online][VHOG]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000315") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0030223693 Liem KF, Bemis WE, Walker WF, Grande L, Functional Anatomy of the Vertebrates: An Evolutionary Perspective (2001) p.242, ISBN:978-0072528305 Kardong KV, Vertebrates: Comparative Anatomy, Function, Evolution (2006) p.235") "The skull of ancestral tetrapods has the three basic components that we have been considering: (1) chondrocranium, (2) splanchnocranium, and (3) dermatocranium (reference 1); Each part of the skull arises from a separate phylogenetic source. The most ancient part is the splanchnocranium (visceral cranium), which first arose to support pharyngeal slits in protochordates (reference 2).[well established][VHOG]") AnnotationAssertion(Annotation( "VSAO") "VSAO labels this term 'pharyngeal arch' (2012-06-01) - however, it clearly means pharyngeal arch skeleton.") AnnotationAssertion( "many sources define this as the part of the endoskeletal that is from pharyngeal arches - this would make it part-disjoint from dermatocranium. However, there are many bones in AOs that have part-paths to both") AnnotationAssertion( ) AnnotationAssertion( "AAO:0010157") AnnotationAssertion( "TAO:0001216") AnnotationAssertion( "VHOG:0000315") AnnotationAssertion( "VSAO:0000149") AnnotationAssertion( "XAO:0003176") AnnotationAssertion( "ZFA:0001216") AnnotationAssertion(Annotation( ) "pharyngeal endoskeleton") AnnotationAssertion(Annotation( ) Annotation( "VHOG:0000315") Annotation( "ZFA:0001216") Annotation( ) "viscerocranium") AnnotationAssertion( "uberon") AnnotationAssertion( "branchial arch skeleton") AnnotationAssertion( "gill arch skeleton") AnnotationAssertion(Annotation( "VSAO:0000149") Annotation( ) "pharyngeal arch") AnnotationAssertion(Annotation( "ZFA:0001216") "pharyngeal arch skeleton") AnnotationAssertion(Annotation( "ZFA:0001216") "pharyngeal skeleton") AnnotationAssertion(Annotation( ) "visceral cranium") AnnotationAssertion(Annotation( ) "visceral skeletal system") AnnotationAssertion(Annotation( "UBERONREF:0000007") "visceral skeleton") AnnotationAssertion( "UBERON:0008895") AnnotationAssertion(rdfs:label "splanchnocranium") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/7/77/Illu_facial_bones.jpg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses( ) # Class: (post-hyoid pharyngeal arch) AnnotationAssertion(Annotation( ) "A pharyngeal arch that is posterior to the hyoid arch. i.e. any pharyngeal arch with a number 3 or higher.") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0010362") Annotation( "AAO"^^xsd:string) Annotation( "AAO:EJS"^^xsd:string) "Posterior-most stream of cranial neural crest, which sub-divides during migration.[AAO]") AnnotationAssertion( ) AnnotationAssertion( "AAO:0010362") AnnotationAssertion( "BTO:0002152") AnnotationAssertion( "EFO:0003694") AnnotationAssertion( "TAO:0001597") AnnotationAssertion( "XAO:0000099") AnnotationAssertion( "ZFA:0001613") AnnotationAssertion(Annotation( "ZFA:0001613") "branchial arch") AnnotationAssertion(Annotation( "ZFA:0001613") Annotation( ) "branchial arches") AnnotationAssertion(Annotation( "ZFA:0001613") "branchial bar") AnnotationAssertion(Annotation( "ZFA:0001613") Annotation( ) "branchial bars") AnnotationAssertion(Annotation( "ZFA:0001613") "gill arch") AnnotationAssertion(Annotation( "ZFA:0001613") "gill arches 1-5") AnnotationAssertion(Annotation( "ZFA:0001613") "pharyngeal arch 3-7") AnnotationAssertion(Annotation( "ZFA:0001613") "visceral arches 3-7") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "gill bar") AnnotationAssertion( "UBERON:0008896") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "post-hyoid pharyngeal arch") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lateral recess of third ventricle) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Lateral protrusion of the third ventricle.") AnnotationAssertion(Annotation( "ZFA:0000231") Annotation( ) "lateral recess") AnnotationAssertion( "TAO:0000231") AnnotationAssertion( "ZFA:0000231") AnnotationAssertion(Annotation( "ZFIN:ZDB-PUB-091221-27") "lateral recess of diencephalic ventricle") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "ZFA:0000231") Annotation( ) "lateral recesses") AnnotationAssertion( "UBERON:0008902") AnnotationAssertion(rdfs:label "lateral recess of third ventricle") SubClassOf(Annotation( "ZFA"^^xsd:string) ) SubClassOf(Annotation( "ZFA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (dermal bone) AnnotationAssertion(Annotation( ) Annotation( ) Annotation( "GO_REF:0000034"^^xsd:string) Annotation( "VSAO:0000130") "Skeletal element that forms superficially in the organism, usually in association with the ectoderm[VSAO].") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0001590") Annotation( "TAO"^^xsd:string) Annotation( "TAO:wd"^^xsd:string) "Intramembranous bone that forms superficially in the organism.[TAO]") AnnotationAssertion( "other AOs are not yet in sync with this classification") AnnotationAssertion( ) AnnotationAssertion( "AAO:0010769") AnnotationAssertion( "TAO:0001590") AnnotationAssertion( "VSAO:0000130") AnnotationAssertion( "XAO:0004015") AnnotationAssertion( "ZFA:0001590") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "ZFA:0001590") Annotation( ) "dermal bones") AnnotationAssertion( "UBERON:0008907") AnnotationAssertion(rdfs:label "dermal bone") SubClassOf(Annotation( "wd") ) SubClassOf(Annotation( "VSAO"^^xsd:string) ) SubClassOf(Annotation( "VSAO"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (perichordal bone) AnnotationAssertion(Annotation( ) Annotation( "GO_REF:0000034"^^xsd:string) Annotation( "VSAO:0000307") "Bone element that is adjacent to the notochord.") AnnotationAssertion( "We go with the latest VSAO in making this a subtype of bone, and add a logical definition based on the textual definition in VSAO. We also include the subtyping under 'replacement bone', for consistency with ZFA") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0001639") Annotation( "TAO"^^xsd:string) Annotation( "TAO:wd"^^xsd:string) "Replacement bone that forms within the connective tissue surrounding the notochord.[TAO]") AnnotationAssertion( "AAO:0010777") AnnotationAssertion( "TAO:0001639") AnnotationAssertion( "VSAO:0000307") AnnotationAssertion( "ZFA:0001629") AnnotationAssertion(Annotation( "ZFA:0001629") Annotation( ) "perichordal bones") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "ZFA:0001629") "perichordal bone") AnnotationAssertion( "UBERON:0008909") AnnotationAssertion(rdfs:label "perichordal bone") SubClassOf(Annotation( "not in VSAO") Annotation( "ZFA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses( ) # Class: (chondral bone) AnnotationAssertion(Annotation( ) Annotation( "zfin:curator") "Replacement bone that forms within or surrounding a cartilaginous skeletal element.") AnnotationAssertion(Annotation( "ZFA"^^xsd:string) "This class was introduced to be consistent with the ZFA hierarchy. The term was never introduced into VSAO.") AnnotationAssertion( "AAO:0010774") AnnotationAssertion( "ZFA:0001693") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0008911") AnnotationAssertion(rdfs:label "chondral bone") SubClassOf(Annotation( "ZFA"^^xsd:string) ) # Class: (perichondral bone) AnnotationAssertion(Annotation( ) Annotation( "GO_REF:0000034"^^xsd:string) Annotation( "VSAO:0000308") "Bone element that is located on the surface of a cartilage element.") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0001638") Annotation( "TAO"^^xsd:string) Annotation( "TAO:wd"^^xsd:string) "Replacement bone that forms within the connective tissue surrounding cartilage.[TAO]") AnnotationAssertion( "AAO:0010779") AnnotationAssertion( "TAO:0001638") AnnotationAssertion( "VSAO:0000308") AnnotationAssertion( "ZFA:0001630") AnnotationAssertion(Annotation( "ZFA:0001630") Annotation( ) "perichondral bones") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "ZFA:0001630") "perichondral bone") AnnotationAssertion( "UBERON:0008913") AnnotationAssertion(rdfs:comment "include the subtyping under 'replacement bone', for consistency with ZFA, but VSAO does not include this intermediate class") AnnotationAssertion(rdfs:label "perichondral bone") SubClassOf( ) SubClassOf(Annotation( "VSAO"^^xsd:string) ) SubClassOf(Annotation( "ZFA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (pore) AnnotationAssertion(Annotation( "TAO:curator") "An anatomical space that is an opening, usually at the end of a canal or duct, on the surface of the integument or the lining of an internal anatomical space.") AnnotationAssertion( ) AnnotationAssertion( "AAO:0010441") AnnotationAssertion( "NCIT:C70672") AnnotationAssertion( "TAO:0001791") AnnotationAssertion(Annotation( "ncithesaurus:Pore") "UMLS:C1325742") AnnotationAssertion( "ZFA:0005449") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0008915") AnnotationAssertion(rdfs:label "pore") SubClassOf(Annotation( "ZFA"^^xsd:string) ) # Class: (obsolete mesenchyme from somatopleure) AnnotationAssertion( "UBERON:0010377") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0008919") AnnotationAssertion(rdfs:label "obsolete mesenchyme from somatopleure") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete mesenchyme from splanchnopleure) AnnotationAssertion( "UBERON:0010378") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0008920") AnnotationAssertion(rdfs:label "obsolete mesenchyme from splanchnopleure") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (substratum of layer of retina) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0008921") AnnotationAssertion(rdfs:label "substratum of layer of retina") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (sublaminar layer S1) AnnotationAssertion(Annotation( "GOC:tfm"^^xsd:string) "A retinal neural layer that is immediately adjacent to the inner nuclear layer and comprises 20 percent of the inner plexiform layer of retina.") AnnotationAssertion( "CP:0000113") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0008922") AnnotationAssertion(rdfs:label "sublaminar layer S1") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (sublaminar layer S2) AnnotationAssertion(Annotation( "GOC:tfm"^^xsd:string) "A retinal neural layer that is immediately adjacent to the S1 and S3 layers and comprises 20 percent of the inner plexiform layer of retina.") AnnotationAssertion( "CP:0000114") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0008923") AnnotationAssertion(rdfs:label "sublaminar layer S2") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (sublaminar layer S3) AnnotationAssertion(Annotation( "GOC:tfm"^^xsd:string) "A retinal neural layer that is immediately adjacent to the S2 and S4 layers and comprises 20 percent of the inner plexiform layer of retina.") AnnotationAssertion( "CP:0000115") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0008924") AnnotationAssertion(rdfs:label "sublaminar layer S3") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (sublaminar layer S4) AnnotationAssertion(Annotation( "GOC:tfm"^^xsd:string) "A retinal neural layer that is immediately adjacent to the S3 and S5 layer and comprises 20 percent of the inner plexiform layer of retina.") AnnotationAssertion( "CP:0000116") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0008925") AnnotationAssertion(rdfs:label "sublaminar layer S4") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (sublaminar layer S5) AnnotationAssertion(Annotation( "GOC:tfm"^^xsd:string) "A retinal neural layer that is immediately adjacent to the retinal ganglion cell layer and comprises 20 percent of the ganglion plexiform layer of retina.") AnnotationAssertion( "CP:0000117") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0008926") AnnotationAssertion(rdfs:label "sublaminar layer S5") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (sublaminar layers S1 or S2) AnnotationAssertion(Annotation( ) Annotation( "GOC:tfm"^^xsd:string) "One of sublaminar layers S1 or S2.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "CP:0000118") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0008927") AnnotationAssertion(rdfs:label "sublaminar layers S1 or S2") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (sublaminar layers S2 or S3) AnnotationAssertion(Annotation( ) Annotation( "GOC:tfm"^^xsd:string) "One of sublaminar layers S2 or S3.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "CP:0000119") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0008928") AnnotationAssertion(rdfs:label "sublaminar layers S2 or S3") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (sublaminar layers S4 or S5) AnnotationAssertion(Annotation( ) Annotation( "GOC:tfm"^^xsd:string) "One of sublaminar layers S4 or S5.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "CP:0000120") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0008929") AnnotationAssertion(rdfs:label "sublaminar layers S4 or S5") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (somatosensory cortex) AnnotationAssertion(Annotation( "MESH:A08.186.211.730.885.213.670.675") "Area of the parietal lobe concerned with receiving general sensations. It lies posterior to the central sulcus.") AnnotationAssertion( "TODO - add layers") AnnotationAssertion( "TODO - add relationship to system (not part of, as sensory systems are peripheral)") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:SS") AnnotationAssertion( "BTO:0004353") AnnotationAssertion( "EFO:0001391") AnnotationAssertion( "FMA:242642") AnnotationAssertion( "GAID:681") AnnotationAssertion( "MBA:453") AnnotationAssertion( "MESH:A08.186.211.730.885.213.670.675") AnnotationAssertion(Annotation( "FMA:242642") "somatic sensory cortex") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:242642") "primary somatic sensory cortex") AnnotationAssertion(Annotation( "BTO:0004353") "somatic sensory cortex") AnnotationAssertion(Annotation( "BTO:0004353") "somatosensory area") AnnotationAssertion(Annotation( "BAMS:SS") "somatosensory areas") AnnotationAssertion(Annotation( "BTO:0004353") "somesthetic area") AnnotationAssertion( "UBERON:0008930") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "somatosensory cortex") SubClassOf( ) SubClassOf(Annotation( "NIFSTD"^^xsd:string) ) SubClassOf(Annotation( "BTO"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (primary somatosensory cortex) AnnotationAssertion(Annotation( "NLX:143551") "(Chapin & Lin, 1984, rat): the region considered as the SI cortex is not a cytoarchitecturally homogeneous structure but consists instead of a patchwork array of areas containing dense aggregations of layer IV granule cells, surrounded by granule-cell-sparse regions. As was shown by Welker (b71,b76), and in our own mapping studies (see Fig. 3), this discontinuous pattern of granular, or koniocortical, zones contains within itself a map of the ratbs cutaneous periphery. There are clear subtypes within this cytoarchitectural subregion, notably including the bgranular aggregateb type of cytoarchitecture characteristic of the paw, limb, and mystacial vibrissae areas, and the bbarrel-fieldb type (originally described by Woolsey and Van der Loos, b70) seen in the nose and perioral regions. In the mouse, but not the rat, such barrels also cover the whole whisker representation (Welker and Woolsey, b74).") AnnotationAssertion(Annotation( "ABA") "ABA disjointness - Removed relationship: part_of UBERON:0001870 frontal cortex") AnnotationAssertion(Annotation( ) "S1") AnnotationAssertion( ) AnnotationAssertion( "BAMS:S1") AnnotationAssertion( "BAMS:SSp") AnnotationAssertion( "DHBA:10209") AnnotationAssertion( "EMAPA:35706") AnnotationAssertion( "MA:0000908") AnnotationAssertion( "MBA:322") AnnotationAssertion( "NLX:143551") AnnotationAssertion(Annotation( "DHBA:10209") "primary somatosensory cortex (area S1, areas 3,1,2)") AnnotationAssertion(Annotation( ) "somatosensory area 1") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "DHBA:10209") Annotation( ) "S1C") AnnotationAssertion(Annotation( ) "postcentral gyrus") AnnotationAssertion(Annotation( "BAMS:SSp") "primary somatosensory area") AnnotationAssertion( "UBERON:0008933") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "primary somatosensory cortex") SubClassOf( ) SubClassOf(Annotation( "DHBA"^^xsd:string) Annotation( "MA"^^xsd:string) Annotation( "NIFSTD"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (secondary somatosensory cortex) AnnotationAssertion(Annotation( "ISBN:0838580343") Annotation( "MP:0000863") "The area of the upper bank of the lateral sulcus that is involved in somatic sensation.") AnnotationAssertion( "TODO - check brodmann") AnnotationAssertion(Annotation( ) "S2") AnnotationAssertion( ) AnnotationAssertion( "BAMS:S2") AnnotationAssertion( "BAMS:SSs") AnnotationAssertion( "EMAPA:35756") AnnotationAssertion( "MA:0000918") AnnotationAssertion( "MBA:378") AnnotationAssertion(Annotation( ) "somatosensory area 2") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BAMS:SSs") "supplemental somatosensory area") AnnotationAssertion( "UBERON:0008934") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "secondary somatosensory cortex") SubClassOf( ) SubClassOf(Annotation( "WP"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (gastropod cerebral ganglion) AnnotationAssertion(Annotation( "BTO:0001843") "The cerebral ganglia are primarily sensual centres, that compute information from the eyes as well as from the tactile and position sensors (statocystes). Besides coordination they also serve the locational memory of a snail.") AnnotationAssertion( "consider merging into brain") AnnotationAssertion( "BTO:0001843") AnnotationAssertion(Annotation( "BTO:0001843") "cerebral ganglion") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0008942") AnnotationAssertion(rdfs:label "gastropod cerebral ganglion") SubClassOf(Annotation( "BTO"^^xsd:string) ) # Class: (extraembryonic endoderm) AnnotationAssertion(Annotation( ) Annotation( ) Annotation( "ISBN:9780878932504") "An extraembryonic epithelium that is formed by the delaminated cells of the primitive endoderm (hypoblast) that goes on to form the yolk sac. In mammals, as in avians, these cells do not produce any part of the newborn organism (i.e. they are extraembryonic).") AnnotationAssertion( "The origin of extraembryonic endoderm is a highly controversial issue") AnnotationAssertion( "forms the yolk sac (Gilbert)") AnnotationAssertion( "EHDAA2:0000473") AnnotationAssertion( "EHDAA:105") AnnotationAssertion( "EMAPA:16052") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0008945") AnnotationAssertion(rdfs:label "extraembryonic endoderm") SubClassOf(Annotation( "EHDAA2"^^xsd:string) ) SubClassOf( ) # Class: (lung parenchyma) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A parenchyma that is part of a lung.") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:35522") AnnotationAssertion( "FMA:27360") AnnotationAssertion( "MA:0003168") AnnotationAssertion(Annotation( "FMA:27360") "respiratory portion of lung") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0000763") "parenchyma of lung") AnnotationAssertion(Annotation( "EMAPA:35522") "pulmonary parenchyma") AnnotationAssertion( "UBERON:0008946") AnnotationAssertion(rdfs:label "lung parenchyma") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (respiratory primordium) AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0004069") AnnotationAssertion( "NCIT:C34283") AnnotationAssertion(Annotation( "ncithesaurus:Respiratory_Primordium") "UMLS:C1514898") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0008947") AnnotationAssertion(rdfs:label "respiratory primordium") SubClassOf(Annotation( "Obol") ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (upper lobe of lung) AnnotationAssertion(Annotation( ) "A lobe of the lung that is closest to the head.") AnnotationAssertion( "the logical definition must have a clause stating position relative to a lower lobe, otherwise a single lobed side (such as the left lobe in the mouse) trivially classifies as an upper lobe") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:7334") AnnotationAssertion( "NCIT:C12285") AnnotationAssertion(Annotation( "ncithesaurus:Lung_Upper_Lobe") "UMLS:C0225756") AnnotationAssertion( "galen:UpperLobeOfLung") AnnotationAssertion(Annotation( ) "cranial lobe of lung") AnnotationAssertion(Annotation( "FMA:7334") "lobus superior") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) Annotation( ) "lobus superior pulmonis") AnnotationAssertion(Annotation( "FMA:7334") "superior lobe of lung") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0008948") AnnotationAssertion(rdfs:label "upper lobe of lung") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses( ) # Class: (lower lobe of lung) AnnotationAssertion(Annotation( "ncithesaurus:Lung_Lower_Lobe") "The bottom most subdivision of either the right or left lung.") AnnotationAssertion( "defining lobes spatially across species") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:7335") AnnotationAssertion( "NCIT:C12287") AnnotationAssertion(Annotation( "ncithesaurus:Lung_Lower_Lobe") "UMLS:C0225758") AnnotationAssertion( "galen:LowerLobeOfLung") AnnotationAssertion(Annotation( ) "inferior lobe of lung") AnnotationAssertion(Annotation( ) "lobus inferior") AnnotationAssertion(Annotation( ) "lobus inferior pulmonis") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0008949") AnnotationAssertion(rdfs:label "lower lobe of lung") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses( ) # Class: (azygous lobe of lung) AnnotationAssertion(Annotation( ) Annotation( ) "The azygous lobe of the lung is an accessory lobe of the right lung. It is rare and usually associated with an abnormality of the azygous vein. It is produced by an aberrant position of the azygous vein near the hilum of the lung. It divides the right superior lobe near the apex of the lung down to the hilum in roughly the median plane. The fissure created, the meso-azygous fissure, is lined by both visceral and parietal pleura. The lobe lies superomedial to the fissure.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0008950") AnnotationAssertion(rdfs:label "azygous lobe of lung") SubClassOf( ) # Class: (left lung lobe) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A lobe of lung that is part of a left lung.") AnnotationAssertion(Annotation( "ISBN:0123813611"^^xsd:string) "1 in mice, divided into 2 in human by a single interlobar fissure, the oblqiue fissure") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EHDAA:2981") AnnotationAssertion( "NCIT:C48945") AnnotationAssertion(Annotation( "ncithesaurus:Lobe_of_the_Left_Lung") "UMLS:C1285107") AnnotationAssertion( "lobe of left lung") AnnotationAssertion( "lobe of the left lung") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0008951") AnnotationAssertion(rdfs:label "left lung lobe") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (upper lobe of left lung) AnnotationAssertion(Annotation( ) "The lobe of the left lung that is closest to the head.") AnnotationAssertion(Annotation( "ISBN:0123813611"^^xsd:string) ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0000953") AnnotationAssertion( "EHDAA:4957") AnnotationAssertion( "FMA:7370") AnnotationAssertion( "NCIT:C33021") AnnotationAssertion(Annotation( "ncithesaurus:Upper_Lobe_of_the_Left_Lung") "UMLS:C1261076") AnnotationAssertion( "galen:UpperLobeOfLeftLung") AnnotationAssertion(Annotation( "EHDAA2:0000953") "left lung cranial lobe") AnnotationAssertion(Annotation( "FMA:7370") "left upper lobe") AnnotationAssertion(Annotation( "FMA:7370") "left upper lobe of lung") AnnotationAssertion(Annotation( "FMA:7370") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "lobus superior (pulmo sinister)") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) Annotation( ) "lobus superior pulmonis sinistri") AnnotationAssertion(Annotation( "FMA:7370") "superior lobe of left lung") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0008952") AnnotationAssertion(rdfs:label "upper lobe of left lung") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ) # Class: (lower lobe of left lung) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A lower lobe of lung that is part of a left lung.") AnnotationAssertion(Annotation( "ISBN:0123813611"^^xsd:string) ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0000945") AnnotationAssertion( "EHDAA:4949") AnnotationAssertion( "FMA:7371") AnnotationAssertion( "NCIT:C33020") AnnotationAssertion(Annotation( "ncithesaurus:Lower_Lobe_of_the_Left_Lung") "UMLS:C1261077") AnnotationAssertion( "galen:LowerLobeOfLeftLung") AnnotationAssertion(Annotation( "FMA:7371") "inferior lobe of left lung") AnnotationAssertion(Annotation( "FMA:7371") "left lower lobe") AnnotationAssertion(Annotation( "FMA:7371") "left lower lobe of lung") AnnotationAssertion(Annotation( "EHDAA2:0000945") "left lung caudal lobe") AnnotationAssertion(Annotation( "FMA:7371") "lobus inferior (pulmo sinister)") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) Annotation( ) "lobus inferior pulmonis sinistri") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0008953") AnnotationAssertion(rdfs:label "lower lobe of left lung") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ) # Class: (lingula of left lung) AnnotationAssertion(Annotation( ) Annotation( "ISBN:0123813611"^^xsd:string) "Anterioinferior portion of left upper lung lobe.") AnnotationAssertion(Annotation( "ISBN:0123813611"^^xsd:string) ) AnnotationAssertion(Annotation( "https://github.com/obophenotype/uberon/issues/79") "the lingula of the left lung in humans is not normally considered a true lobe") AnnotationAssertion( "in Galen, it is a middle lobe") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:7433") AnnotationAssertion( "NCIT:C40373") AnnotationAssertion(Annotation( "ncithesaurus:Lingula") "UMLS:C0225740") AnnotationAssertion( "galen:MiddleLobeOfLeftLung") AnnotationAssertion(Annotation( "FMA:7433") "left pulmonary lingula") AnnotationAssertion(Annotation( "FMA:7433") "lingula of lung") AnnotationAssertion( "lingula of the lung") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "galen:MiddleLobeOfLeftLung") "middle lobe of left lung") AnnotationAssertion( "UBERON:0008954") AnnotationAssertion(rdfs:label "lingula of left lung") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ) SubClassOf(Annotation( "ISBN:0123813611"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (middle lobe of lung) AnnotationAssertion(Annotation( ) "A lobe of the lung that is situated somewhere between an upper lobe and lower lobe.") AnnotationAssertion( "mice have 4 right lobes (5 in some schemes), humans have 2, and thus no middle lobe (the lingula is not a lobe)") AnnotationAssertion( ) AnnotationAssertion( "galen:MiddleLobeOfLung") AnnotationAssertion( "lung middle lobe") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0008955") AnnotationAssertion(rdfs:label "middle lobe of lung") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (involucrum) AnnotationAssertion(Annotation( ) "A layer of new bone growth outside existing bone seen in pyogenic osteomyelitis. It results from the stripping off of the periosteum by the accumulation of pus within the bone, and new bone growing from the periosteum.") AnnotationAssertion( ) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0008956") AnnotationAssertion(rdfs:label "involucrum") SubClassOf( ) SubClassOf(Annotation( "Wikipedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (sequestrum) AnnotationAssertion(Annotation( ) "A piece of dead bone that has become separated during the process of necrosis from normal/sound bone..") AnnotationAssertion( ) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0008957") AnnotationAssertion(rdfs:label "sequestrum") SubClassOf( ) SubClassOf(Annotation( "Wikipedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (auditory bulla) AnnotationAssertion(Annotation( ) "A hollow bony structure on the ventral, posterior portion of the skull of placental mammals that encloses parts of the middle and inner ear. In most species, it is formed by the tympanic part of the temporal bone.") AnnotationAssertion(Annotation( "Rose") "In extant primates, the structure is found in tarsiers, lemurs, and lorises[WP]. When present in marsupials, it usually forms the alisphenoid; in placentals variously constructed of ectotympanic, entotympanic, petrosal, or a combination of these and others") AnnotationAssertion( "may be formed from entotympanic and ectotympanic") AnnotationAssertion( "bulla") AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37433") AnnotationAssertion( "NCIT:C112425") AnnotationAssertion( "sigmoid process") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "auditory bullae") AnnotationAssertion(Annotation( ) Annotation( ) "bulla tympanica") AnnotationAssertion( "tympanic bulla") AnnotationAssertion( "UBERON:0008959") AnnotationAssertion(rdfs:label "auditory bulla") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/a/af/Toothed_whale_sound_production.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "ISBN:0073040584"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "Rose") ObjectSomeValuesFrom( )) # Class: (forelimb bone) AnnotationAssertion(Annotation( ) "A bone that is part of a forelimb region. Examples: humerus, any of the phalanges. Counter-example: scapula (a bone of the pectoral girdle). Note that we consider the forelimb to end at the shoulder.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "GAID:178") AnnotationAssertion( "MESH:D001133") AnnotationAssertion( "NCIT:C12983") AnnotationAssertion(Annotation( "ncithesaurus:Bone_of_the_Upper_Extremity") "UMLS:C0003793") AnnotationAssertion(Annotation( ) Annotation( "UBERONREF:0000003"^^xsd:string) "free forelimb bone") AnnotationAssertion(Annotation( "Geisha:syn") Annotation( "NCBITaxon:8782"^^xsd:string) Annotation( ) "wing bone") AnnotationAssertion(Annotation( "NCBITaxon:8782"^^xsd:string) Annotation( "OBOL:automatic"^^xsd:string) Annotation( ) "wing bone") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0008962") AnnotationAssertion(rdfs:label "forelimb bone") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (centrum semiovale) AnnotationAssertion(Annotation( ) "The semioval center is the white matter found underneath the grey matter on the surface of the cerebrum. The term is synonymous with cerebral white matter. The white matter, located in each hemisphere between the cerebral cortex and nuclei, as a whole has a semioval shape. It consists of cortical projection fibers, association fibers and cortical fibers.") AnnotationAssertion( "WP suggests a merge with cerebral white matter") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:cw") AnnotationAssertion( "BAMS:sovc") AnnotationAssertion( "BTO:0000229") AnnotationAssertion( "FMA:61939") AnnotationAssertion(Annotation( "FMA:61939") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "centrum ovale") AnnotationAssertion(Annotation( "FMA:61939") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "corpus medullare cerebri") AnnotationAssertion(Annotation( "FMA:61939") "medullary center") AnnotationAssertion(Annotation( "FMA:61939") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "substantia centralis medullaris cerebri") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "centrum semiovale") AnnotationAssertion( "cerebral white matter") AnnotationAssertion(Annotation( "BTO:0000229") "semioval center") AnnotationAssertion(Annotation( "FMA:61939") "white matter of cerebrum") AnnotationAssertion( "UBERON:0008967") AnnotationAssertion(rdfs:label "centrum semiovale") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/9/95/Gray752.png"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (dental follicle) AnnotationAssertion(Annotation( ) "A sac containing the developing tooth and its odontogenic organ. The dental follicle (DF) differentiates into the periodontal ligament. In addition, it may be the precursor of other cells of the periodontium, including osteoblasts, cementoblasts and fibroblasts. They develop into the alveolar bone, the cementum with Sharpey's fibers and the periodontal ligament fibers respectively.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0000337") AnnotationAssertion( "EMAPA:35275") AnnotationAssertion( "MA:0003121") AnnotationAssertion( "NCIT:C34138") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( "MA:0003121") "dental sac") AnnotationAssertion(Annotation( "BTO:0000337") "tooth follicle") AnnotationAssertion( "UBERON:0008969") AnnotationAssertion(rdfs:label "dental follicle") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (left colon) AnnotationAssertion(Annotation( "BTO:0000646") "The distal portion of the colon; it develops embryonically from the hindgut and functions in the storage and elimination of waste.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0000646") AnnotationAssertion( "CALOHA:TS-0202") AnnotationAssertion( "NCIT:C33929") AnnotationAssertion(Annotation( "ncithesaurus:Left_Colon") "UMLS:C0227388") AnnotationAssertion( "galen:LeftColon") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0000646") "distal colon") AnnotationAssertion( "UBERON:0008971") AnnotationAssertion(rdfs:label "left colon") SubClassOf( ) SubClassOf(Annotation( "BTO"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "BTO"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (right colon) AnnotationAssertion(Annotation( "BTO:0000649") "The proximal portion of the colon, extending from the ileocecal valve usually to a point proximal to the left colic flexure; it develops embryonically from the terminal portion of the midgut and functions in absorption.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0000649") AnnotationAssertion( "NCIT:C12383") AnnotationAssertion(Annotation( "ncithesaurus:Right_Colon") "UMLS:C1305188") AnnotationAssertion( "galen:RightColon") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0000649") "proximal colon") AnnotationAssertion( "UBERON:0008972") AnnotationAssertion(rdfs:label "right colon") SubClassOf( ) SubClassOf(Annotation( "BTO"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "BTO"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (apocrine gland) AnnotationAssertion(Annotation( "MGI:anna"^^xsd:string) "Any exocrine gland whose cells bud their secretions off through the plasma membrane producing membrane-bound vesicles in the lumen; the apical portion of the secretory cell of the gland pinches off and enters the lumen; it loses part of its cytoplasm in their secretions; apocrine secretion is functional during hormonal stress or puberty; an example of true apocrine glands are mammary glands, responsible for secreting breast milk.") AnnotationAssertion( "apocrine") AnnotationAssertion( "Mammary glands are modified apocrine glands present in both humans and mice; unlike humans, mice do not have axillary apocrine sweat glands[MGI:anna]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0001162") AnnotationAssertion( "EMAPA:35141") AnnotationAssertion( "MA:0003040") AnnotationAssertion( "true apocrine gland") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0008974") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "apocrine gland") SubClassOf( ) DisjointClasses(Annotation( "cjm"^^xsd:string) ) # Class: (oviduct shell gland) AnnotationAssertion(Annotation( "ISBN:978-0226870137") "A gland in the posterior expansion of the oviduct that secretes the calcareous surroundings of the egg shell.") AnnotationAssertion( ) AnnotationAssertion( "BTO:0001241") AnnotationAssertion(Annotation( "BTO:0001241") "shell gland") AnnotationAssertion( "uberon") AnnotationAssertion( "nidamental gland") AnnotationAssertion( "UBERON:0008975") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "oviduct shell gland") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pes anserinus of tibia) AnnotationAssertion(Annotation( ) "The pes anserinus is the insertion of the conjoined tendons of three muscles onto the anteromedial (front and inside) surface of the proximal extremity of the tibia.") AnnotationAssertion( "Consider adding muscle insertion site class") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0001507") AnnotationAssertion( "FMA:311256") AnnotationAssertion(Annotation( "BTO:0001507") "pes anserinus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "pes anserine") AnnotationAssertion(Annotation( ) "pes anserinus of leg") AnnotationAssertion( "UBERON:0008977") AnnotationAssertion(rdfs:label "pes anserinus of tibia") AnnotationAssertion( "Pes:anserinus.png"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "BTO"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (anal sac) AnnotationAssertion(Annotation( ) Annotation( "BTO:0001681") "In carnivores, either of two sacs found between the internal and external anal sphincters, lined with sebaceous glands and in some species with apocrine glands.") AnnotationAssertion( ) AnnotationAssertion( "BTO:0001681") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37395") AnnotationAssertion( "MA:0003058") AnnotationAssertion( "MESH:D000695") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0008978") AnnotationAssertion(rdfs:label "anal sac") SubClassOf( ) SubClassOf( ) # Class: (carcass) AnnotationAssertion(Annotation( "UBERON:cjm"^^xsd:string) "A body of a multi-cellular organism that is no longer living.") AnnotationAssertion( ) AnnotationAssertion( "BTO:0001965") AnnotationAssertion( "NCIT:C113674") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0001965") "cadaver") AnnotationAssertion(Annotation( "BTO:0001965") "dead body") AnnotationAssertion( "UBERON:0008979") AnnotationAssertion(rdfs:label "carcass") SubClassOf( ) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete rhinencephalon) AnnotationAssertion(Annotation( "BTO:0002785") "The olfactory region of the brain, located in the cerebrum.") AnnotationAssertion( "BTO:0002785") AnnotationAssertion( "SCTID:361576004") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0002785") "olfactory brain") AnnotationAssertion( "UBERON:0008981") AnnotationAssertion(rdfs:comment "Obsoleted because The term rhinencephalon has been used to describe different structures at different points in time.[ISBN 0-8493-8631-4]. May refer to: a specific structure in aves; a part of the brain involved with olfaction;") AnnotationAssertion(rdfs:label "obsolete rhinencephalon") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (fascia) AnnotationAssertion(Annotation( ) "A dense regular connective tissue that that connects muscles together[WP, modified].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0002930") AnnotationAssertion( "EV:0100150") AnnotationAssertion( "FMA:30318") AnnotationAssertion( "MESH:D005205") AnnotationAssertion( "NCIT:C13108") AnnotationAssertion(Annotation( "ncithesaurus:Fascia") "UMLS:C0015641") AnnotationAssertion(Annotation( "FMA:30318") "fascia cluster") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0008982") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "fascia") SubClassOf(Annotation( "Wikipedia"^^xsd:string) ) SubClassOf( ObjectIntersectionOf(ObjectMinCardinality(2 ) ObjectMaxCardinality(2 ))) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "fasciae connect muscles to other muscles") ObjectSomeValuesFrom( )) # Class: (renal parenchyma) AnnotationAssertion(Annotation( "BTO:0003604") "The functional tissue of the kidney, consisting of the nephrons.") AnnotationAssertion( ) AnnotationAssertion( "BTO:0003604") AnnotationAssertion( "FMA:15574") AnnotationAssertion(Annotation( "FMA:15574") "parenchyma of kidney") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0003604") "kidney parenchyma") AnnotationAssertion( "UBERON:0008987") AnnotationAssertion(rdfs:label "renal parenchyma") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (submucosal esophageal gland) AnnotationAssertion(Annotation( ) Annotation( "BTO:0003634") "One of the racemose glands in the walls of the esophagus that in humans are small and serve principally to lubricate the food but in some birds secrete a milky fluid on which the young are fed.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0003634") AnnotationAssertion( "FMA:9404") AnnotationAssertion( "NCIT:C32536") AnnotationAssertion(Annotation( "ncithesaurus:Esophageal_Gland") "UMLS:C0227178") AnnotationAssertion(Annotation( "FMA:9404") "esophageal gland") AnnotationAssertion(Annotation( ) "glandulae oesophageae") AnnotationAssertion(Annotation( "FMA:9404") "mucous gland of submucosa of esophagus") AnnotationAssertion( "uberon") AnnotationAssertion( "submocosal esophageal gland") AnnotationAssertion( "UBERON:0008989") AnnotationAssertion(rdfs:label "submucosal esophageal gland") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/e/e8/Illu_esophageal_layers.jpg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (chorion frondosum) AnnotationAssertion(Annotation( "BTO:0003677") "The part of the chorion where the villi persist, forming the foetal part of the placenta.") AnnotationAssertion( ) AnnotationAssertion( "BTO:0003677") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0003677") "shaggy chorion") AnnotationAssertion( "UBERON:0008992") AnnotationAssertion(rdfs:label "chorion frondosum") SubClassOf(Annotation( "BTO"^^xsd:string) ) SubClassOf(Annotation( "BTO"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (habenular nucleus) AnnotationAssertion(Annotation( ) "Either of the two neural nuclei within the habenula.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:N.Hb") AnnotationAssertion( "BTO:0003685") AnnotationAssertion( "DHBA:10452") AnnotationAssertion( "EHDAA2:0004710") AnnotationAssertion( "HBA:4521") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0003685") "ganglion habenulae") AnnotationAssertion(Annotation( "DHBA:HN") Annotation( ) "habenular nuclei") AnnotationAssertion(Annotation( "BTO:0003685") "nucleus habenulae") AnnotationAssertion( "UBERON:0008993") AnnotationAssertion(rdfs:label "habenular nucleus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (equine glandular stomach) AnnotationAssertion(Annotation( "BTO:0003791") "Stomach found in horses; includes cardiac, proper gastric and pyloric glandular zones.") AnnotationAssertion( "We have a distinct class for 'glandular region of stomach'. We may want to merge into this class, even though this is not considered a distinct stomach.") AnnotationAssertion( "BTO:0003791") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0003791") "stomachus glandularis") AnnotationAssertion( "UBERON:0008994") AnnotationAssertion(rdfs:label "equine glandular stomach") SubClassOf(Annotation( "BTO"^^xsd:string) ) # Class: (nucleus of cerebellar nuclear complex) AnnotationAssertion(Annotation( "BTO:0003835") "Four accumulations of gray substance embedded in the white substance of the cerebellum, comprising the nucleus dentatus, nucleus emboliformis, nucleus globosus, and nucleus fastigii.") AnnotationAssertion(Annotation( "ISBN:0471888893"^^xsd:string) ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "One or more deep cerebellar nuclei appear in agnathans, sharks, ropefishes, lungfishes, Latimeria, and amphibians. Reptiles have two nuclei (a medial and a lateral), and birds and mammals have three nuclei (a medial, a lateral, and an interposed nucleus). The medial nucleus of mammals is known as the fastigial nucleus, and the lateral nucleus is known as the dentate nucleus.[BgeeDb][ISBN:0471888893]") AnnotationAssertion( ) AnnotationAssertion( "BTO:0003835") AnnotationAssertion( "EMAPA:35272") AnnotationAssertion( "FMA:321695") AnnotationAssertion( "MA:0000203") AnnotationAssertion(Annotation( "BTO:0003835") "cerebellar nucleus") AnnotationAssertion( "deep cerebellar nucleus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0008995") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "nucleus of cerebellar nuclear complex") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (vasculature of brain) AnnotationAssertion(Annotation( "BTO:0003840") "System pertaining to blood vessels in the brain.") AnnotationAssertion( "UBERON:0005284") AnnotationAssertion( ) AnnotationAssertion( "BTO:0003840") AnnotationAssertion( "EFO:0003491") AnnotationAssertion( "EMAPA:35186") AnnotationAssertion( "FMA:242007") AnnotationAssertion( "FMA:61935") AnnotationAssertion( "TAO:0000099") AnnotationAssertion( "ZFA:0000099") AnnotationAssertion( "brain vasculature") AnnotationAssertion(Annotation( "BTO:0003840") "cerebrovascular system") AnnotationAssertion(Annotation( "FMA:61935") "intracerebral vasculature") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0008998") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "vasculature of brain") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (ischial spine) AnnotationAssertion(Annotation( "BTO:0004149") "A bony process projecting backward and medialward from the posterior border of the ischium.") AnnotationAssertion(Annotation( ) "From the posterior border of the body of the Ischium there extends backward a thin and pointed triangular eminence, the ischial spine, more or less elongated in different subjects. It can serve as a landmark in pudendal anesthesia[Wikipedia:Ischial_spine].") AnnotationAssertion(Annotation( "BTO"^^xsd:string) "BTO places this in the vertebral column") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0004149") AnnotationAssertion( "FMA:17028") AnnotationAssertion(Annotation( "FMA:17028") "spina ischialis") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "spine of ischium") AnnotationAssertion(Annotation( ) "spine of the ischium") AnnotationAssertion(Annotation( ) "the ischial spines") AnnotationAssertion( "UBERON:0009000") AnnotationAssertion(rdfs:label "ischial spine") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (placental membrane) AnnotationAssertion(Annotation( "BTO:0004196") "The membrane separating the fetal from the maternal blood in the placenta.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0004196") AnnotationAssertion( "NCIT:C34253") AnnotationAssertion(Annotation( "ncithesaurus:Placental_Membrane") "UMLS:C0230984") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0004196") "placental barrier") AnnotationAssertion( "UBERON:0009002") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "placental membrane") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "BTO"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (femorotibial joint) AnnotationAssertion(Annotation( "BTO:0004396") "One of the two primary bendings of a typical leg, pertains to the femur and the tibia.") AnnotationAssertion( "proposed OWL definition: skeletal join that connects ONLY tibia and femur") AnnotationAssertion( ) AnnotationAssertion( "BTO:0004396") AnnotationAssertion( "FMA:43571") AnnotationAssertion( "femoratibial joint") AnnotationAssertion(Annotation( "FMA:43571") "tibiofemoral joint") AnnotationAssertion( "uberon") AnnotationAssertion( "knee") AnnotationAssertion( "UBERON:0009005") AnnotationAssertion(rdfs:label "femorotibial joint") SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (deep inguinal lymph node) AnnotationAssertion(Annotation( "BTO:0004548") "One of several small inconstant lymph nodes, proximal, intermediate and distal deep to the fascia lata and medial to the femoral vein; they receive lymph from the deep structures of the lower limb, from the glans penis and from superficial inguinal nodes; efferents pass to the external iliac nodes.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0004548") AnnotationAssertion( "FMA:44225") AnnotationAssertion(Annotation( "FMA:44225") "deep inguinal node") AnnotationAssertion(Annotation( "FMA:44225") Annotation( ) "nodus lymphaticus inguinalis profundus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0004548") Annotation( ) "nodi lymphatici inguinales profundi") AnnotationAssertion( "UBERON:0009006") AnnotationAssertion(rdfs:label "deep inguinal lymph node") SubClassOf(Annotation( "Wikipedia"^^xsd:string) ) # Class: (superficial inguinal lymph node) AnnotationAssertion(Annotation( "BTO:0004549") "A group of 12-20 lymph nodes that lie in the subcutaneous tissue below the inguinal ligament and along the terminal part of the great saphenous vein; they drain the skin and subcutaneous tissue of the lower abdominal wall, perineum, buttocks, external genitalia, and lower limbs.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0004549") AnnotationAssertion( "FMA:5036") AnnotationAssertion(Annotation( "FMA:5036") "lymph node of Cloquet") AnnotationAssertion(Annotation( "FMA:5036") "lymph node of Rosenmuller") AnnotationAssertion(Annotation( "FMA:5036") Annotation( ) "nodus lymphaticus inguinalis superficialis") AnnotationAssertion(Annotation( "FMA:5036") "superficial inguinal node") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "nodi lymphatici inguinales superficiali") AnnotationAssertion( "UBERON:0009007") AnnotationAssertion(rdfs:label "superficial inguinal lymph node") SubClassOf(Annotation( "Wikipedia"^^xsd:string) ) SubClassOf( ) # Class: (carotid sinus nerve) AnnotationAssertion(Annotation( ) "A sensory branch of the glossopharyngeal nerve (CN IX) carrying signals from the baroceptors (blood pressure receptors) in the bifurcation of the carotid artery to the nucleus of the solitary tract (nucleus solitarius).") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0004978") AnnotationAssertion( "FMA:53488") AnnotationAssertion(Annotation( ) "Hering sinus nerve") AnnotationAssertion(Annotation( "FMA:53488") "carotid branch of glossopharyngeal nerve") AnnotationAssertion(Annotation( "FMA:53488") Annotation( ) "ramus sinus carotici") AnnotationAssertion(Annotation( ) "ramus sinus carotici nervi glossopharyngei") AnnotationAssertion(Annotation( "FMA:53488") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "ramus sinus carotici nervus glossopharyngei") AnnotationAssertion(Annotation( ) "sinus nerve of Hering") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009009") AnnotationAssertion(rdfs:label "carotid sinus nerve") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (periurethral tissue) AnnotationAssertion(Annotation( "UBERON:cjm"^^xsd:string) "Any portion of tissue that surrounds a urethra.") AnnotationAssertion( ) AnnotationAssertion( "BTO:0005081") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009010") AnnotationAssertion(rdfs:label "periurethral tissue") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (white fibrocartilage) AnnotationAssertion(Annotation( ) "Fibrocartilage in which strong bundles of white fibrous tissue predominate.") AnnotationAssertion( "consider merging with fibrocartilage") AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37806") AnnotationAssertion( "MA:0000486") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009013") AnnotationAssertion(rdfs:label "white fibrocartilage") SubClassOf(Annotation( "cjm"^^xsd:string) ) # Class: (lower back skin) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A zone of skin that is part of a lower back.") AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37281") AnnotationAssertion( "MA:0000504") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009014") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "lower back skin") SubClassOf( ) SubClassOf(Annotation( "MA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (upper back skin) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A zone of skin that is part of a dorsal thoracic segment of trunk.") AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37280") AnnotationAssertion( "MA:0000510") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009015") AnnotationAssertion(rdfs:label "upper back skin") SubClassOf( ) SubClassOf(Annotation( "MA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (ciliary stroma) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:35241") AnnotationAssertion( "FMA:312260") AnnotationAssertion( "MA:0001239") AnnotationAssertion( "ocular ciliary stroma") AnnotationAssertion( "stroma of ciliary body") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009016") AnnotationAssertion(rdfs:label "ciliary stroma") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "MA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (left uterine horn) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An uterine horn that is in the left side of a uterus.") AnnotationAssertion( "https://github.com/obophenotype/uberon/wiki/Modeling-paired-structures-Design-Pattern"^^xsd:anyURI) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37374") AnnotationAssertion( "MA:0001727") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009020") AnnotationAssertion(rdfs:label "left uterine horn") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (right uterine horn) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An uterine horn that is in the right side of a uterus.") AnnotationAssertion( "https://github.com/obophenotype/uberon/wiki/Modeling-paired-structures-Design-Pattern"^^xsd:anyURI) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37375") AnnotationAssertion( "MA:0001728") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009022") AnnotationAssertion(rdfs:label "right uterine horn") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (gastroepiploic artery) AnnotationAssertion(Annotation( "NCIT:C52857") "One of two (right and left) arteries along the greater curvature of the stomach that supply blood to the greater omentum and stomach.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37082") AnnotationAssertion( "MA:0001962") AnnotationAssertion( "MESH:D024405") AnnotationAssertion( "NCIT:C52857") AnnotationAssertion(Annotation( "ncithesaurus:Gastroepiploic_Artery") "UMLS:C0447070") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009025") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "gastroepiploic artery") SubClassOf(Annotation( "MA"^^xsd:string) ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (iliac circumflex artery) AnnotationAssertion(Annotation( "ncithesaurus:Circumflex_Iliac_Artery") "One of two (deep circumflex and superficial circumflex) iliac arteries that supply the lower abdomen, inguinal lymph nodes, sartorius, and tensor fasciae latae.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37084") AnnotationAssertion( "MA:0001975") AnnotationAssertion( "NCIT:C52863") AnnotationAssertion(Annotation( "ncithesaurus:Circumflex_Iliac_Artery") "UMLS:C0447101") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009026") AnnotationAssertion(rdfs:label "iliac circumflex artery") SubClassOf(Annotation( "MA"^^xsd:string) ) # Class: (vesical artery) AnnotationAssertion(Annotation( ) "An artery that supplies blood to the urinary bladder.") AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37131") AnnotationAssertion( "MA:0002078") AnnotationAssertion(Annotation( ) "arteria vesicali") AnnotationAssertion(Annotation( ) "vesical arteries") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009027") AnnotationAssertion(rdfs:label "vesical artery") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pudendal vein) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37184") AnnotationAssertion( "MA:0002202") AnnotationAssertion( "uberon") AnnotationAssertion( "pudic vein") AnnotationAssertion( "UBERON:0009029") AnnotationAssertion(rdfs:label "pudendal vein") SubClassOf(Annotation( "MA"^^xsd:string) ) SubClassOf( ) # Class: (left pulmonary vein) AnnotationAssertion(Annotation( ) "Vein that drains left lung and returns blood to the heart.") AnnotationAssertion(Annotation( "ncithesaurus:Left_Pulmonary_Vein") "A vein that returns oxygenated blood from the left lung to the left atrium of the heart[ncithesaurus:Left_Pulmonary_Vein].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37165") AnnotationAssertion( "MA:0002207") AnnotationAssertion( "NCIT:C48946") AnnotationAssertion(Annotation( "ncithesaurus:Left_Pulmonary_Vein") "UMLS:C0226670") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009030") AnnotationAssertion(rdfs:label "left pulmonary vein") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (right pulmonary vein) AnnotationAssertion(Annotation( ) "Vein that drains right lung and returns blood to the heart.") AnnotationAssertion(Annotation( "ncithesaurus:Right_Pulmonary_Vein") "A vein that returns oxygenated blood from the right lung to the left atrium of the heart[ncithesaurus:Right_Pulmonary_Vein].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37379") AnnotationAssertion( "MA:0002208") AnnotationAssertion( "NCIT:C48947") AnnotationAssertion(Annotation( "ncithesaurus:Right_Pulmonary_Vein") "UMLS:C0226669") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009032") AnnotationAssertion(rdfs:label "right pulmonary vein") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (renal straight tubule) AnnotationAssertion(Annotation( ) "Any region of a nephron tubule that is straight. Examples: distal convoluted tubule, proximal convoluted tuble.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37489") AnnotationAssertion( "MA:0002634") AnnotationAssertion(Annotation( "MA:0002634") "kidney straight tubule") AnnotationAssertion( "straight tubule") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009035") AnnotationAssertion(rdfs:label "renal straight tubule") SubClassOf( ) # Class: (sulcus ampullaris) AnnotationAssertion(Annotation( ) "The groove on the external surface of the ampulla of each semicircular duct where the nerve enters the ampullary crest.") AnnotationAssertion( ) AnnotationAssertion( "FMA:74584") AnnotationAssertion( "MA:0002835") AnnotationAssertion(Annotation( "FMA:74584") "ampullary groove") AnnotationAssertion( "ampullary sulcus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009038") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "sulcus ampullaris") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf(Annotation( "MA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lymph node germinal center) AnnotationAssertion(Annotation( "CL:tm") "A germinal center that is located in a lymph node.") AnnotationAssertion(Annotation( "BTO:0003671") "germinal center") AnnotationAssertion( ) AnnotationAssertion( "BTO:0003671") AnnotationAssertion( "CALOHA:TS-1269") AnnotationAssertion( "EMAPA:35528") AnnotationAssertion( "MA:0002989") AnnotationAssertion( "NCIT:C49757") AnnotationAssertion( "lymph node light zone") AnnotationAssertion( "uberon") AnnotationAssertion( "lymph node activated zone") AnnotationAssertion( "lymph node central zone") AnnotationAssertion( "lymph node nodule") AnnotationAssertion( "UBERON:0009039") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "lymph node germinal center") SubClassOf( ) SubClassOf(Annotation( "MA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (deep circumflex iliac artery) AnnotationAssertion(Annotation( ) "The deep circumflex iliac artery (or deep iliac circumflex artery) is an artery in the pelvis that travels along the iliac crest of the pelvic bone.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:20687") AnnotationAssertion( "NCIT:C32432") AnnotationAssertion(Annotation( "ncithesaurus:Deep_Circumflex_Iliac_Artery") "UMLS:C0226405") AnnotationAssertion(Annotation( ) "arteria circumflexa ilium profunda") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "arteria circumflexa ilium profunda") AnnotationAssertion(Annotation( ) "deep iliac circumflex") AnnotationAssertion(Annotation( ) "deep iliac circumflex artery") AnnotationAssertion( "UBERON:0009040") AnnotationAssertion(rdfs:label "deep circumflex iliac artery") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/0/07/Gray586.png"^^xsd:anyURI) AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/7/74/Gray586.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (superficial circumflex iliac artery) AnnotationAssertion(Annotation( ) "The superficial iliac circumflex artery (or superficial circumflex iliac), the smallest of the cutaneous branches of the femoral artery, arises close to the superficial epigastric artery, and, piercing the fascia lata, runs lateralward, parallel with the inguinal ligament, as far as the crest of the ilium. It divides into branches which supply the integument of the groin, the superficial fascia, and the superficial subinguinal lymph glands, anastomosing with the deep iliac circumflex, the superior gluteal and lateral femoral circumflex arteries.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:20737") AnnotationAssertion( "NCIT:C52864") AnnotationAssertion(Annotation( "ncithesaurus:Superficial_Circumflex_Iliac_Artery") "UMLS:C0738891") AnnotationAssertion(Annotation( ) "arteria circumflexa ilium superficialis") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "iliac circumflex artery") AnnotationAssertion(Annotation( ) "superficial circumflex iliac artery") AnnotationAssertion( "UBERON:0009041") AnnotationAssertion(rdfs:label "superficial circumflex iliac artery") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/8/8b/Gray548.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (prostatic venous plexus) AnnotationAssertion(Annotation( ) "The prostatic veins form a well-marked prostatic plexus which lies partly in the fascial sheath of the prostate and partly between the sheath and the prostatic capsule. It communicates with the pudendal and vesical plexuses.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:29711") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "plexus venosus prostaticus") AnnotationAssertion(Annotation( "FMA:29711") "pudendal venous plexus") AnnotationAssertion( "UBERON:0009042") AnnotationAssertion(rdfs:label "prostatic venous plexus") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/b/bd/Gray585.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pudendal venous plexus) AnnotationAssertion(Annotation( ) "The pudendal plexus (vesicoprostatic plexus) lies behind the arcuate pubic ligament and the lower part of the pubic symphysis, and in front of the bladder and prostate. Its chief tributary is the deep dorsal vein of the penis, but it also receives branches from the front of the bladder and prostate. It communicates with the vesical plexus and with the internal pudendal vein and drains into the vesical and hypogastric veins.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009044") AnnotationAssertion(rdfs:label "pudendal venous plexus") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (inferior external pudendal vein) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37155") AnnotationAssertion( "MA:0002203") AnnotationAssertion( "uberon") AnnotationAssertion( "inferior external pudic vein") AnnotationAssertion( "UBERON:0009046") AnnotationAssertion(rdfs:label "inferior external pudendal vein") SubClassOf( ) # Class: (superior external pudendal vein) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37192") AnnotationAssertion( "MA:0002204") AnnotationAssertion( "uberon") AnnotationAssertion( "superior external pudic vein") AnnotationAssertion( "UBERON:0009047") AnnotationAssertion(rdfs:label "superior external pudendal vein") SubClassOf( ) # Class: (deep external pudendal vein) AnnotationAssertion( "FMA:44488") AnnotationAssertion( "uberon") AnnotationAssertion( "deep external pudic vein") AnnotationAssertion( "UBERON:0009048") AnnotationAssertion(rdfs:label "deep external pudendal vein") SubClassOf( ) SubClassOf( ) # Class: (superficial external pudendal vein) AnnotationAssertion( "FMA:21377") AnnotationAssertion( "uberon") AnnotationAssertion( "superficial external pudic vein") AnnotationAssertion( "UBERON:0009049") AnnotationAssertion(rdfs:label "superficial external pudendal vein") SubClassOf( ) SubClassOf( ) # Class: (nucleus of solitary tract) AnnotationAssertion(Annotation( ) Annotation( "OBOL:automatic"^^xsd:string) "A neural nucleus that is part of the solitary tract nuclear complex. The solitary tract and nucleus are structures in the brainstem that carry and receive visceral sensation and taste from the facial (VII), glossopharyngeal (IX) and vagus (X) cranial nerves. [WP,unvetted].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:NTS") AnnotationAssertion( "BAMS:Sol") AnnotationAssertion( "BIRNLEX:1429") AnnotationAssertion( "BM:Me-NS") AnnotationAssertion( "BTO:0003963") AnnotationAssertion( "DHBA:12557") AnnotationAssertion( "EMAPA:35787") AnnotationAssertion( "EV:0100288") AnnotationAssertion( "FMA:256691") AnnotationAssertion( "GAID:593") AnnotationAssertion( "HBA:9653") AnnotationAssertion( "MA:0001052") AnnotationAssertion( "MBA:651") AnnotationAssertion( "MESH:D017552") AnnotationAssertion( "NCIT:C13067") AnnotationAssertion(Annotation( "BIRNLEX:1429") "UMLS:C0175518") AnnotationAssertion(Annotation( "ncithesaurus:Solitary_Nucleus") "UMLS:C0175518") AnnotationAssertion(Annotation( "BIRNLEX:1429") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=742") AnnotationAssertion( "ncithesaurus:Nucleus_of_the_Solitary_Tract") AnnotationAssertion(Annotation( "BIRNLEX:1429") "nucleus of the tractus solitarius") AnnotationAssertion(Annotation( ) "nucleus of tractus solitarius") AnnotationAssertion(Annotation( ) Annotation( ) "nucleus tractus solitarii medullae oblongatae") AnnotationAssertion( "solitary nucleus") AnnotationAssertion( "solitary tract nucleus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:742") Annotation( ) "nuclei tractus solitarii") AnnotationAssertion(Annotation( "BIRNLEX:1429") "nucleus of the solitary tract") AnnotationAssertion(Annotation( "NeuroNames:742") Annotation( ) "nucleus solitarius") AnnotationAssertion(Annotation( "NeuroNames:742") Annotation( ) "nucleus tracti solitarii") AnnotationAssertion(Annotation( "BTO:0003963") Annotation( ) "nucleus tractus solitarii") AnnotationAssertion(Annotation( "NeuroNames:742") "solitary nuclear complex") AnnotationAssertion(Annotation( "BTO:0003963") "solitary nucleus") AnnotationAssertion( "UBERON:0009050") AnnotationAssertion(rdfs:label "nucleus of solitary tract") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/3/30/Gray696.png"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "Wikipedia"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (gelatinous nucleus of solitary tract) AnnotationAssertion( "FMA:77463") AnnotationAssertion( "MBA:674") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009051") AnnotationAssertion(rdfs:label "gelatinous nucleus of solitary tract") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (medial nucleus of solitary tract) AnnotationAssertion( "FMA:229585") AnnotationAssertion( "MBA:691") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009052") AnnotationAssertion(rdfs:label "medial nucleus of solitary tract") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (dorsal nucleus of trapezoid body) AnnotationAssertion( "merge with SOC? See https://github.com/obophenotype/uberon/issues/631#issuecomment-67754754") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:2575") AnnotationAssertion(Annotation( "BIRNLEX:2575") "UMLS:C0228438") AnnotationAssertion(Annotation( "BIRNLEX:2575") "UMLS:C1289450") AnnotationAssertion(Annotation( "BIRNLEX:2575") "dorsal nucleus of trapezoid body") AnnotationAssertion(Annotation( ) "nucleus dorsalis corporis trapezoidei") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009053") AnnotationAssertion(rdfs:label "dorsal nucleus of trapezoid body") SubClassOf( ) # Class: (open circulatory system) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009054") AnnotationAssertion(rdfs:comment "The Open Circulatory System is a system in which fluid (called hemolymph) in a cavity called the hemocoel bathes the organs directly with oxygen and nutrients and there is no distinction between blood and interstitial fluid; this combined fluid is called hemolymph or haemolymph") AnnotationAssertion(rdfs:label "open circulatory system") SubClassOf(Annotation( "GO"^^xsd:string) ) # Class: (closed circulatory system) AnnotationAssertion( "consider merging with cardiovascular system?") AnnotationAssertion( "The circulatory systems of all vertebrates, as well as of annelids (for example, earthworms) and cephalopods (squid and octopus) are closed, just as in humans. Still, the systems of fish, amphibians, reptiles, and birds show various stages of the evolution of the circulatory system") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009055") AnnotationAssertion(rdfs:label "closed circulatory system") SubClassOf(Annotation( "GO"^^xsd:string) ) # Class: (two-pass circulatory system) AnnotationAssertion(Annotation( ) Annotation( "GO:0035905") "A closed circulatory system in which blood passes twice through the heart to supply the body once.") AnnotationAssertion( ) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009056") AnnotationAssertion(rdfs:label "two-pass circulatory system") SubClassOf( ) # Class: (one-pass circulatory system) AnnotationAssertion(Annotation( "GO:0035907") "A closed circulatory system in which blood passes once through the heart to supply the body once.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009057") AnnotationAssertion(rdfs:label "one-pass circulatory system") SubClassOf( ) # Class: (faveolus) AnnotationAssertion(Annotation( ) "A bellows-shaped respiratory unit extending from the outer wall of the lung into a central air space.") AnnotationAssertion( "lung faveolus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "edicula") AnnotationAssertion(Annotation( ) "faveoli") AnnotationAssertion( "UBERON:0009058") AnnotationAssertion(rdfs:comment "Dunker (1978) coined the terms ediculae or faveoli to describe the unit structure of the reptilian parenchymal, which are analogous to mammalian alveoli, but are up to 1,000 times larger than alveoli of similar sized mammals[PMID:12625309]") AnnotationAssertion(rdfs:label "faveolus") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (inner medulla vasa recta descending limb) AnnotationAssertion(Annotation( "CL") "This class was created in order to align KUPO with CL. The original class was undefined, and the intended meaning is not clear, may be obsoleted in future. The vasa recta is parallel to the loop of Henles, this may refer to the portion of the vasa recta in the inner medullar parallel to the descending limb") AnnotationAssertion( "KUPO:0001003") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009089") AnnotationAssertion(rdfs:label "inner medulla vasa recta descending limb") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "KUPO") ObjectSomeValuesFrom( )) # Class: (outer medulla vasa recta descending limb) AnnotationAssertion(Annotation( "CL") "This class was created in order to align KUPO with CL. The original class was undefined, and the intended meaning is not clear, may be obsoleted in future. The vasa recta is parallel to the loop of Henles, this may refer to the portion of the vasa recta in the outer medullar parallel to the descending limb") AnnotationAssertion( "KUPO:0001004") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009090") AnnotationAssertion(rdfs:label "outer medulla vasa recta descending limb") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "KUPO") ObjectSomeValuesFrom( )) # Class: (vasa recta ascending limb) AnnotationAssertion(Annotation( "CL") "This class was created in order to align KUPO with CL. The original class was undefined, and the intended meaning is not clear, may be obsoleted in future. The vasa recta is parallel to the loop of Henles, this may refer to the portion of the vasa recta parallel to the ascending limb") AnnotationAssertion( "KUPO:0001005") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009091") AnnotationAssertion(rdfs:label "vasa recta ascending limb") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "KUPO") ObjectSomeValuesFrom( )) # Class: (inner medulla vasa recta ascending limb) AnnotationAssertion(Annotation( "CL") "This class was created in order to align KUPO with CL. The original class was undefined, and the intended meaning is not clear, may be obsoleted in future. The vasa recta is parallel to the loop of Henles, this may refer to the portion of the vasa recta in the inner medulla parallel to the ascending limb") AnnotationAssertion( "KUPO:0001006") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009092") AnnotationAssertion(rdfs:label "inner medulla vasa recta ascending limb") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "KUPO") ObjectSomeValuesFrom( )) # Class: (outer medulla vasa recta ascending limb) AnnotationAssertion(Annotation( "CL") "This class was created in order to align KUPO with CL. The original class was undefined, and the intended meaning is not clear, may be obsoleted in future. The vasa recta is parallel to the loop of Henles, this may refer to the portion of the vasa recta in the outer medulla parallel to the ascending limb") AnnotationAssertion( "KUPO:0001007") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009093") AnnotationAssertion(rdfs:label "outer medulla vasa recta ascending limb") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "KUPO") ObjectSomeValuesFrom( )) # Class: (tip of renal papilla) AnnotationAssertion( "KUPO:0001009") AnnotationAssertion(Annotation( "KUPO:0001009") "papillary tip") AnnotationAssertion(Annotation( "KUPO:0001009") Annotation( ) "papillary tips") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009095") AnnotationAssertion(rdfs:label "tip of renal papilla") SubClassOf( ) SubClassOf(Annotation( "KUPO") ObjectSomeValuesFrom( )) # Class: (obsolete gravid stage) AnnotationAssertion( "UBERON:0009097") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009096") AnnotationAssertion(rdfs:comment "Obsoleted as the gravid stage is not a life cycle stage. A similar term may be recreated when we have stages specific to structures such as the uterus") AnnotationAssertion(rdfs:label "obsolete gravid stage") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (gravid organism) AnnotationAssertion(Annotation( "BTO:0004733") "An organism containing a developing embryo, fetus, or unborn offspring within the body.") AnnotationAssertion( "BTO:0004733") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0004733") "gravid") AnnotationAssertion(Annotation( "BTO:0004733") "pregnant adult") AnnotationAssertion(Annotation( "BTO:0004733") "pregnant adult stage") AnnotationAssertion( "pregnant organism") AnnotationAssertion(Annotation( "BTO:0004733") "pregnant stage") AnnotationAssertion( "UBERON:0009097") AnnotationAssertion(rdfs:label "gravid organism") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (gravid uterus) AnnotationAssertion(Annotation( ) "The uterus in pregnancy.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "NCIT:C12406") AnnotationAssertion(Annotation( "ncithesaurus:Pregnant_Uterus") "UMLS:C1514389") AnnotationAssertion( "ncithesaurus:Gravid_Uterus") AnnotationAssertion( "uberon") AnnotationAssertion( "womb") AnnotationAssertion( "UBERON:0009098") AnnotationAssertion(rdfs:label "gravid uterus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete thymic region) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009113") AnnotationAssertion(rdfs:label "obsolete thymic region") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (cervical thymus) AnnotationAssertion(Annotation( ) "A mature thymus that is entirely part of the cervical region.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "A cervical thymus is a pathological structure in a human - it can form during the migration of the thymus to its location in the mediastinum. Some mice have a cervical thymus. There are examples of cervical thymi in marsupials and prosimians[ISBN:0781714125]") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009114") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "cervical thymus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (thoracic thymus) AnnotationAssertion(Annotation( ) "A mature thymus that is entirely part of thoracic region.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009115") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "thoracic thymus") SubClassOf( ) SubClassOf( ) # Class: (indifferent gonad) AnnotationAssertion(Annotation( ) "A gonad prior to differentiating into a definitive testis or ovary.") AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0000716") AnnotationAssertion( "NCIT:C34192") AnnotationAssertion(Annotation( "ncithesaurus:Indifferent_Gonad") "UMLS:C1512703") AnnotationAssertion( "uberon") AnnotationAssertion( "gonad rudiment") AnnotationAssertion( "UBERON:0009117") AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "typically part of the embryo - however, in male tammar wallabies the gonads are indifferent at the neonatal stage[8827321]") AnnotationAssertion(rdfs:label "indifferent gonad") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (vomeronasal nerve) AnnotationAssertion(Annotation( ) Annotation( "AAO:DSM") Annotation( "ISBN:0471888893"^^xsd:string) "Nerve carrying fibers from the vomeronasal organ epithelium to the accessory olfactory bulb.") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0010608") Annotation( "AAO"^^xsd:string) Annotation( "AAO:DSM") "Nerve carrying fibers from the vomeronasal organ to the accessory olfactory bulb.[AAO]") AnnotationAssertion( "In the human this disappears before birth") AnnotationAssertion( ) AnnotationAssertion( "AAO:0010608") AnnotationAssertion( "BAMS:vn") AnnotationAssertion( "BAMS:von") AnnotationAssertion( "BTO:0001351") AnnotationAssertion( "MBA:949") AnnotationAssertion( "NLXANAT:1005018") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BAMS:vn") "accessory olfactory bulb vomeronasal nerve") AnnotationAssertion( "UBERON:0009121") AnnotationAssertion(rdfs:label "vomeronasal nerve") SubClassOf(Annotation( "NIFSTD"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "ISBN:0471888893"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (adenohypophyseal placode) AnnotationAssertion(Annotation( ) "The adenohypophyseal placode forms the anterior lobe of the pituitary gland and gives rise to the endocrine secretory cells of the pituitary.") AnnotationAssertion( "consider adding more detailed spatial placement - e.g. oral ectoderm and/or rostal ectoderm") AnnotationAssertion( "Fate-mapping studies in amphibian, chick and mouse embryos (Eagleson et al., 1986; 1995; Couly and Le Douarin, 1985; Cobos et al., 2001; Osumi-Yamachita et al., 1994; Kawamura et al., 2002) have shown that the cells contributing to the adenohypophysis develop at the midline of the anterior neural ridge, which delineates the rostral boundary of the neural plate, a region devoid of neural crest. The anterior neural ridge also gives rise to the olfactory placodes and some forebrain tissues including the olfactory bulbs (reviewed in Papalopulu, 1995). Ablation of this region in chick embryos at the 2-4 somite stage confirmed these lineage analyses as it prevented formation of Rathke's pouch and any further pituitary development (elAmraoui and Dubois, 1993). Upon head folding, the oral ectoderm cells of the adenohypophyseal placode invaginate towards the prospective ventral diencephalon to form Rathke's pouch, the anlage of the adenohypophysis. Rathke's pouch starts as an invagination of the oral ectoderm in response to inductive signals from the prospective diencephalon. The region of the diencephalon above the pouch is known as the infundibulum and forms the posterior lobe of the pituitary or neurohypohysis (Figure 3). While in most basal fish and tetrapods the adenohypophyseal anlagen invaginates to form Rathke's pouch, in teleost fish the adenohypophyseal placode does not invaginate but rather maintains its initial organization forming a solid structure in the head (reviewed in Pogoda and Hammerschmidt; 2009)") AnnotationAssertion( "EFO:0000229") AnnotationAssertion( "TAO:0001198") AnnotationAssertion( "XAO:0004208") AnnotationAssertion( "ZFA:0001198") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "ZFA:0001198") "pituitary placode") AnnotationAssertion( "UBERON:0009122") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "adenohypophyseal placode") SubClassOf( ) SubClassOf(Annotation( "NCBIBook:NBK53175"^^xsd:string) ) SubClassOf(Annotation( "ZFA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (geniculate placode) AnnotationAssertion(Annotation( "NCBIBook:NBK53175") "Rostralmost epibranchial placode. Associated with 1st branchial cleft.") AnnotationAssertion( "EHDAA2:0004206") AnnotationAssertion( "TAO:0001295") AnnotationAssertion( "XAO:0004211") AnnotationAssertion( "ZFA:0001295") AnnotationAssertion(Annotation( "EHDAA2:0004206") "epibranchial placode 1") AnnotationAssertion(Annotation( "XAO:0004211") "facial epibranchial placode") AnnotationAssertion(Annotation( "ZFA:0001295") "facial placode") AnnotationAssertion( "uberon") AnnotationAssertion( "facial VII placode") AnnotationAssertion(Annotation( "ISBN:0471888893"^^xsd:string) "hyoid VII placode") AnnotationAssertion(Annotation( "ISBN:0471888893"^^xsd:string) "hyoid placode") AnnotationAssertion( "UBERON:0009124") AnnotationAssertion(rdfs:comment "Taxonomic equivalence to EHDAA2 class made on basis of shared development: gives rise to geniculate ganglion") AnnotationAssertion(rdfs:label "geniculate placode") SubClassOf(Annotation( "ZFA"^^xsd:string) ) # Class: (petrosal placode) AnnotationAssertion(Annotation( "NCBIBook:NBK53175") "Epibranchial placode between geniculate and nodose. Associated with 2nd branchial cleft.") AnnotationAssertion( "EHDAA2:0004207") AnnotationAssertion( "TAO:0001296") AnnotationAssertion( "XAO:0004212") AnnotationAssertion( "ZFA:0001296") AnnotationAssertion(Annotation( "EHDAA2:0004207") "epibranchial placode 2") AnnotationAssertion(Annotation( "ISBN:0471888893"^^xsd:string) "glossopharyngeal IX placode") AnnotationAssertion(Annotation( "XAO:0004212") "glossopharyngeal epibranchial placode") AnnotationAssertion(Annotation( "ISBN:0471888893"^^xsd:string) Annotation( "ZFA:0001296") "glossopharyngeal placode") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009125") AnnotationAssertion(rdfs:comment "Taxonomic equivalence to EHDAA2 class made on basis of shared development: gives rise to glossopharyngeal ganglion") AnnotationAssertion(rdfs:label "petrosal placode") SubClassOf(Annotation( "ZFA"^^xsd:string) ) # Class: (nodosal placode) AnnotationAssertion(Annotation( "NCBIBook:NBK53175") "Caudalmost epibranchial placode. Associated with 3rd branchial cleft.") AnnotationAssertion( "EHDAA2:0004208") AnnotationAssertion( "XAO:0004213") AnnotationAssertion(Annotation( "EHDAA2:0004208") "epibranchial placode 3") AnnotationAssertion(Annotation( "XAO:0004213") "nodose placode") AnnotationAssertion(Annotation( "XAO:0004213") Annotation( ) "nodose placodes") AnnotationAssertion(Annotation( "XAO:0004213") "vagal epibranchial placode") AnnotationAssertion(Annotation( "XAO:0004213") Annotation( ) "vagal epibranchial placodes") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "ISBN:0471888893"^^xsd:string) "vagal X placode") AnnotationAssertion(Annotation( "ISBN:0471888893"^^xsd:string) "vagal placode") AnnotationAssertion( "UBERON:0009126") AnnotationAssertion(rdfs:comment "Taxonomic equivalence to EHDAA2 class made on basis of shared development: Gives rise to inferior vagus ganglion. Note that ZFA has 4 vagal placodes") AnnotationAssertion(rdfs:label "nodosal placode") SubClassOf(Annotation( "NCBIBook:NBK53175"^^xsd:string) ) # Class: (epibranchial ganglion) AnnotationAssertion(Annotation( ) Annotation( "ZFIN:curator"^^xsd:string) "Cranial ganglion which develops from an epibranchial placode.") AnnotationAssertion( "TAO:0001555") AnnotationAssertion( "ZFA:0001555") AnnotationAssertion(Annotation( "ZFA:0001555") Annotation( ) "epibranchial ganglia") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009127") AnnotationAssertion(rdfs:comment "Epibranchial ganglia orchestrate the development of the cranial neurogenic crest") AnnotationAssertion(rdfs:label "epibranchial ganglion") SubClassOf(Annotation( "ZFA"^^xsd:string) ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "NCBIBook:NBK53175"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (right atrium endocardium) AnnotationAssertion(Annotation( ) "Endocardium that is part of the right atrium.") AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0000274") AnnotationAssertion( "FMA:7281") AnnotationAssertion( "NCIT:C102339") AnnotationAssertion( "VHOG:0001228") AnnotationAssertion(Annotation( "FMA:7281") "endocardium of right atrium") AnnotationAssertion(Annotation( "FMA:7281") "right atrial endocardium") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "VHOG:0001228") "right atrium endocardial tissue") AnnotationAssertion( "UBERON:0009129") AnnotationAssertion(rdfs:label "right atrium endocardium") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (dorsal meso-duodenum) AnnotationAssertion( ) AnnotationAssertion( "RETIRED_EHDAA2:0000411") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009130") AnnotationAssertion(rdfs:label "dorsal meso-duodenum") SubClassOf(Annotation( "EHDAA2"^^xsd:string) ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (obsolete midbrain vesicle) AnnotationAssertion( "EHDAA2:0001103") AnnotationAssertion( "SCTID:361481005") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009131") AnnotationAssertion(rdfs:comment "Obsoleted as the meaning of the class was unclear in earlier versions of EHDAA2") AnnotationAssertion(rdfs:label "obsolete midbrain vesicle") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (peroneus) AnnotationAssertion(Annotation( ) "One of a group of three muscles fibularis (peronæus) longus, brevis, and tertius originating on the fibula and inserting on the metatarsals.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0001450") AnnotationAssertion( "EHDAA:8297") AnnotationAssertion( "EMAPA:36251") AnnotationAssertion( "fibularis") AnnotationAssertion( "fibularis muscle") AnnotationAssertion( "peroneal muscle") AnnotationAssertion( "peroneal muscle group") AnnotationAssertion( "peroneal muscles") AnnotationAssertion( "peroneus muscle") AnnotationAssertion( "peronæus muscle") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009132") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "peroneus") SubClassOf( ) SubClassOf(Annotation( "wikipedia") ObjectSomeValuesFrom( )) SubClassOf(Annotation( "wikipedia") ObjectSomeValuesFrom( )) # Class: (pleuroperitoneal membrane) AnnotationAssertion(Annotation( ) Annotation( ) "A fold of tissue which extends into the peritoneal cavity of the developing embryo and participates in the separation of the pleural and peritoneal cavities.") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000757") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0471090588 Hildebrand M, Analysis of vertebrate structure (1983) p.205-206") "In hagfishes a transverse septum extends upward from the ventral body wall posterior to the heart, partly separating an anterior pericardial cavity from a larger peritoneal cavity. (...) These basic relationships have not been modified by urodeles. The small pericardial cavity remains far forward where it is separated by a transverse septum from the principal coelom, which may now be called a pleuroperitoneal cavity because slender lungs are present. (...) The heart [of other tetrapods] is separated from the lungs (and liver if present) by more or less horizontal partitions that have their origin in the embryo as folds on the serous membrane of the right and left lateral body walls. These grow out to join in the midline of the body. They are called lateral mesocardia (birds) or pleuropericardial membranes. Posteriorly they join the transverse septum to form the adult pericardial membrane, or pericardium. (...) In their partitioning of their coelom, embryonic mammals resemble first early fishes (incomplete partition, posterior to heart, consisting of the transverse septum) and then reptiles (pericardium derived from transverse septum and pleuropericardial membranes). Mammals then separate paired pleural cavities from the peritoneal cavity by a diaphragm. The ventral portion of this organ comes from the transverse septum. The dorsal portion is derived from the dorsal mesentery and from still another pair of outgrowths from the lateral body wall, the pleuroperitoneal membranes.[well established][VHOG]") AnnotationAssertion( "UBERON:0009146") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0001483") AnnotationAssertion( "EMAPA:17709") AnnotationAssertion( "NCIT:C34256") AnnotationAssertion(Annotation( "ncithesaurus:Pleuroperitoneal_Membrane") "UMLS:C1283968") AnnotationAssertion( "VHOG:0000757") AnnotationAssertion(Annotation( "VHOG:0000757") "pleuroperitoneal fold") AnnotationAssertion(Annotation( "EHDAA2:0001483") Annotation( ) "pleuroperitoneal membranes") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009133") AnnotationAssertion(rdfs:label "pleuroperitoneal membrane") SubClassOf(Annotation( "EHDAA2"^^xsd:string) ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (right common cardinal vein) AnnotationAssertion( "only a vestige of the right duct in the adult hagfish (21)[PMID:20959416, S1]") AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0004535") AnnotationAssertion( "FMA:70310") AnnotationAssertion(Annotation( "EHDAA2:0004535") "common cardinal vein right") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009138") AnnotationAssertion(rdfs:label "right common cardinal vein") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (right posterior cardinal vein) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A posterior cardinal vein that is in_the_right_side_of a multicellular organism.") AnnotationAssertion( "https://github.com/obophenotype/uberon/wiki/Modeling-paired-structures-Design-Pattern"^^xsd:anyURI) AnnotationAssertion( "UBERON:0013123") AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0004536") AnnotationAssertion( "FMA:70315") AnnotationAssertion(Annotation( "EHDAA2:0004536") "posterior cardinal vein right") AnnotationAssertion(Annotation( "FMA:70315") "right postcardinal vein") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009139") AnnotationAssertion(rdfs:label "right posterior cardinal vein") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (right subcardinal vein) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A subcardinal vein that is in_the_right_side_of a multicellular organism.") AnnotationAssertion( "https://github.com/obophenotype/uberon/wiki/Modeling-paired-structures-Design-Pattern"^^xsd:anyURI) AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0004538") AnnotationAssertion(Annotation( "EHDAA2:0004538") "subcardinal vein right") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009140") AnnotationAssertion(rdfs:label "right subcardinal vein") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (craniocervical region vein) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A vein that is part of a craniocervical region.") AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0004542") AnnotationAssertion( "craniocervical vein") AnnotationAssertion(Annotation( "EHDAA2:0004542") "head and neck veins") AnnotationAssertion( "vein of head and neck") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009141") AnnotationAssertion(rdfs:label "craniocervical region vein") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (entire embryonic mesenchyme) AnnotationAssertion(Annotation( ) "Sum total of mesenchyme in the embryo.") AnnotationAssertion( "consider adding new class (EMAPA:16097) for mesenchyme of embryo (some mesenchyme is extraembryonic - e.g. amnion mesoderm)") AnnotationAssertion( "UBERON:0003313") AnnotationAssertion( "EHDAA2:0001113") AnnotationAssertion( "EHDAA:177") AnnotationAssertion( "EMAPA:16097") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009142") AnnotationAssertion(rdfs:label "entire embryonic mesenchyme") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete developing esophageal region) AnnotationAssertion( "UBERON:0001043") AnnotationAssertion(Annotation( "EMAPA:16700") "oesophageal region") AnnotationAssertion(Annotation( "RETIRED_EHDAA2:0000654") "oesophageal region") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009143") AnnotationAssertion(rdfs:label "obsolete developing esophageal region") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (pharyngeal region of foregut) AnnotationAssertion( "EMAPA:16549") AnnotationAssertion( "RETIRED_EHDAA2:0001454") AnnotationAssertion(Annotation( "EMAPA:16549") "pharyngeal region") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009145") AnnotationAssertion(rdfs:label "pharyngeal region of foregut") SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (foramen primum) AnnotationAssertion(Annotation( ) Annotation( ) "Opening in the septum primum between the two atria of the embryonic heart[TMD].") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001470") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( ) "First of the two openings to perforate the septum primum between the two atria of the embryonic heart. [TFD][VHOG]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001470") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0721676678 p.433") "The tetrapod clade develops a complete atrial septum and loses the fifth aortic arch altogether. [ISBN:978-0030223693 Liem KF, Bemis WE, Walker WF, Grande L, Functional Anatomy of the Vertebrates: An Evolutionary Perspective (2001) p.620]; [about heart development] In the various tetrapod classes ontogenetic events essentially recapitulate the phylogenetic stages.[well established][VHOG]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0001826") AnnotationAssertion( "EMAPA:17012") AnnotationAssertion( "NCIT:C34178") AnnotationAssertion(Annotation( "ncithesaurus:Foramen_Primum") "UMLS:C1517292") AnnotationAssertion( "VHOG:0001470") AnnotationAssertion(Annotation( ) "interatrial foramen primum") AnnotationAssertion(Annotation( ) "ostium primum") AnnotationAssertion(Annotation( ) "primary interatrial foramen") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009149") AnnotationAssertion(rdfs:label "foramen primum") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (sphenoid bone pre-cartilage condensation) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A sphenoid endochondral element that is composed primarily of a pre-cartilage condensation.") AnnotationAssertion( "EHDAA2:0003446") AnnotationAssertion( "EMAPA:18015") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009191") AnnotationAssertion(rdfs:label "sphenoid bone pre-cartilage condensation") SubClassOf(Annotation( "EHDAA2"^^xsd:string) ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (basisphenoid pre-cartilage condensation) AnnotationAssertion( "EHDAA2:0003447") AnnotationAssertion( "EMAPA:18013") AnnotationAssertion(Annotation( "EHDAA2:0003447") "basi-sphenoid pre-cartilage condensation") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009192") AnnotationAssertion(rdfs:label "basisphenoid pre-cartilage condensation") SubClassOf(Annotation( "EHDAA2"^^xsd:string) ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (sphenoid cartilage element) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A sphenoid endochondral element that is composed primarily of cartilage tissue.") AnnotationAssertion( "EHDAA2:0001888") AnnotationAssertion(Annotation( "EHDAA2:0001888") "sphenoid bone cartilage condensation") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009193") AnnotationAssertion(rdfs:label "sphenoid cartilage element") SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (basisphenoid cartilage condenstion) AnnotationAssertion( "EHDAA2:0000166") AnnotationAssertion( "EMAPA:18338") AnnotationAssertion( "VHOG:0001338") AnnotationAssertion(Annotation( "VHOG:0001338") "basisphenoid cartilage condensation") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009194") AnnotationAssertion(rdfs:label "basisphenoid cartilage condenstion") SubClassOf(Annotation( "EHDAA2"^^xsd:string) ) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (anal membrane) AnnotationAssertion(Annotation( "ncithesaurus:Anal_Membrane") "The dorsal part of the cloacal membrane following its partition by the urorectal septum.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0004018") AnnotationAssertion( "NCIT:C34105") AnnotationAssertion(Annotation( "ncithesaurus:Anal_Membrane") "UMLS:C1288337") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009195") AnnotationAssertion(rdfs:comment "During the 7th week the urorectal septum divides the cloacal membrane into a urogenital membrane (ventrally) and an anal membrane (dorsally) [http://www.embryology.ch/anglais/ugenital/genitexterne01.html]") AnnotationAssertion(rdfs:label "anal membrane") SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (indifferent external genitalia) AnnotationAssertion( "EHDAA2:0004021") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009196") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "indifferent external genitalia") SubClassOf(Annotation( "cjm"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (basioccipital pre-cartilage condensation) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A basioccipital endochondral element that is composed primarily of a pre-cartilage condensation.") AnnotationAssertion( "EHDAA2:0000165") AnnotationAssertion( "EHDAA:6033") AnnotationAssertion( "EMAPA:18012") AnnotationAssertion( "VHOG:0000959") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009197") AnnotationAssertion(rdfs:label "basioccipital pre-cartilage condensation") SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ) SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (craniofacial suture) AnnotationAssertion(Annotation( "GO:0097094") "Any suture between cranial and/or facial bones.") AnnotationAssertion( "we follow GO in dividing sutures into cranial and facial and making a grouping class, but this is not consistent with FMA") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "joint of the skull bones") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "articulation of skull bones") AnnotationAssertion( "UBERON:0009198") AnnotationAssertion(rdfs:label "craniofacial suture") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (facial suture) AnnotationAssertion(Annotation( "GO:0097096") "Any suture between facial bones.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009199") AnnotationAssertion(rdfs:label "facial suture") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "between two adjacent facial bones") ObjectSomeValuesFrom( )) # Class: (limb epidermis) AnnotationAssertion(Annotation( "GOC:dph") Annotation( "GOC:sdb_2009") Annotation( "GOC:tb") "The limb epidermis is the outer epithelial layer of the limb, it is a complex stratified squamous epithelium.") AnnotationAssertion( "EMAPA:32728") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009200") AnnotationAssertion(rdfs:label "limb epidermis") SubClassOf( ) SubClassOf( ) # Class: (nephric duct) AnnotationAssertion(Annotation( "GO:0072176") "A nephric duct is a tube that drains a primitive kidney[GO].") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:16577") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009201") AnnotationAssertion(rdfs:comment "pronephric duct or mesonephric duct") AnnotationAssertion(rdfs:label "nephric duct") SubClassOf(Annotation( "EHDAA2"^^xsd:string) ) SubClassOf( ) SubClassOf( ) SubClassOf( ) # Class: (vasa recta descending limb) AnnotationAssertion(Annotation( "CL") "This class was created in order to align KUPO with CL. The original class was undefined, and the intended meaning is not clear, may be obsoleted in future. The vasa recta is parallel to the loop of Henles, this may refer to the portion of the vasa recta parallel to the descending limb") AnnotationAssertion( "KUPO:0001002") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009202") AnnotationAssertion(rdfs:label "vasa recta descending limb") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "KUPO") ObjectSomeValuesFrom( )) # Class: (internasal suture) AnnotationAssertion(Annotation( ) "A suture joining the nasal bones.") AnnotationAssertion(Annotation( "GO:0097097") "nasal suture") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:52959") AnnotationAssertion( "inter-nasal suture") AnnotationAssertion(Annotation( "FMA:52959") "internasal suture of skull") AnnotationAssertion(Annotation( ) "sutura internasalis") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "sutura internasalis") AnnotationAssertion( "UBERON:0009203") AnnotationAssertion(rdfs:label "internasal suture") SubClassOf( ) # Class: (medial nasal process mesenchyme) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "Mesenchyme that is part of a medial nasal prominence.") AnnotationAssertion( "EHDAA2:0001077") AnnotationAssertion( "EMAPA:16810") AnnotationAssertion( "FMA:312659") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009204") AnnotationAssertion(rdfs:label "medial nasal process mesenchyme") SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) DisjointClasses(Annotation( "lexical"^^xsd:string) ) # Class: (lateral nasal process mesenchyme) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "Mesenchyme that is part of a lateral nasal prominence.") AnnotationAssertion( "EHDAA2:0000917") AnnotationAssertion( "EMAPA:16807") AnnotationAssertion( "FMA:312665") AnnotationAssertion(Annotation( "EMAPA:16807") "mesenchyme of latero-nasal process") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009205") AnnotationAssertion(rdfs:label "lateral nasal process mesenchyme") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lateral nasal process surface ectoderm) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An ectoderm that is part of a lateral nasal prominence.") AnnotationAssertion( "EHDAA2:0000918") AnnotationAssertion( "EMAPA:16806") AnnotationAssertion(Annotation( "EMAPA:16806") "ectoderm of latero-nasal process") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009206") AnnotationAssertion(rdfs:label "lateral nasal process surface ectoderm") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (geschmacksstreifen) AnnotationAssertion(Annotation( ) "Area on the rostral portion of the soft palate rich in tastebuds (Miller and Spangler 1982).") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009207") AnnotationAssertion(rdfs:label "geschmacksstreifen") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pharyngeal membrane) AnnotationAssertion(Annotation( ) "A thin fold of ectoderm and endoderm that separates the pharyngeal pouches from the pharyngeal clefts in a developing embryo.") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001427") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0124020603 Kaufman MH, Bard JBL, The anatomical basis of mouse development (1999) p.72") "In all vertebrates, the endodermal epithelium lining each pouch contacts the surface ectoderm of the clefts to form a series of bilayered branchial membranes, that break down in fish to form the gill openings.[well established][VHOG]") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:32749") AnnotationAssertion( "FMA:295758") AnnotationAssertion( "NCIT:C34251") AnnotationAssertion(Annotation( "ncithesaurus:Pharyngeal_Membrane") "UMLS:C1519040") AnnotationAssertion(Annotation( "EMAPA:32749") "branchial arch membrane") AnnotationAssertion( "branchial membrane") AnnotationAssertion( "pharyngeal membrane") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009210") AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "each membrane is initially composed of an inner layer formed by the endodermal lining of a branchial pouch and an outer layer formed by the ectodermal lining of the branchial groove; later, these two layers become separated by a thin layer of mesoderm; only the first branchial membrane contributes to the formation of an adult structure, i.e. the tympanic membrane (aka eardrum); the second, third, and fourth membranes are obliterated[MP]") AnnotationAssertion(rdfs:label "pharyngeal membrane") SubClassOf( ) SubClassOf(Annotation( "EMAPA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) # Class: (pharyngeal membrane of 1st arch) AnnotationAssertion(Annotation( ) "A pharyngeal membrane that separates the first pharyngeal cleft from the first pharyngeal pouch.") AnnotationAssertion( "check EMAPA - 3 terms appear to match. We follow EMAPA in making each membrane part of the arch with the same number, though in fact it is between these arches") AnnotationAssertion( "EHDAA:3788") AnnotationAssertion( "EMAPA:16121") AnnotationAssertion( "EMAPA:16992") AnnotationAssertion( "EMAPA:17281") AnnotationAssertion( "VHOG:0001427") AnnotationAssertion(Annotation( "EMAPA:16992") "1st branchial membrane") AnnotationAssertion(Annotation( "VHOG:0001427") "1st pharyngeal membrane") AnnotationAssertion(Annotation( "EMAPA:17281") "future tympanic membrane") AnnotationAssertion(Annotation( "ISBN:1416037055") "tympanic membrane primordium") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009213") AnnotationAssertion(rdfs:label "pharyngeal membrane of 1st arch") SubClassOf( ) SubClassOf(Annotation( "EMAPA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) # Class: (pharyngeal membrane of 2nd arch) AnnotationAssertion(Annotation( ) "A pharyngeal membrane that separates the second pharyngeal cleft from the second pharyngeal pouch.") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000877") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0124020603 Kaufman MH and Bard JBL, The anatomical basis of mouse development (1999) p.72") "In all vertebrates, the endodermal epithelium lining each pouch contacts the surface ectoderm of the clefts to form a series of bilayered branchial membranes, that break down in fish to form the gill openings.[well established][VHOG]") AnnotationAssertion( "EMAPA:16273") AnnotationAssertion( "VHOG:0000877") AnnotationAssertion(Annotation( "VHOG:0000877") "2nd pharyngeal membrane") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009215") AnnotationAssertion(rdfs:label "pharyngeal membrane of 2nd arch") SubClassOf( ) SubClassOf(Annotation( "EMAPA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) # Class: (pharyngeal membrane of 3rd arch) AnnotationAssertion(Annotation( ) "A pharyngeal membrane that separates the third pharyngeal cleft from the third pharyngeal pouch.") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000876") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0124020603 Kaufman MH and Bard JBL, The anatomical basis of mouse development (1999) p.72") "In all vertebrates, the endodermal epithelium lining each pouch contacts the surface ectoderm of the clefts to form a series of bilayered branchial membranes, that break down in fish to form the gill openings.[well established][VHOG]") AnnotationAssertion( "EMAPA:16583") AnnotationAssertion( "VHOG:0000876") AnnotationAssertion(Annotation( "VHOG:0000876") "3rd pharyngeal membrane") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009216") AnnotationAssertion(rdfs:label "pharyngeal membrane of 3rd arch") SubClassOf( ) SubClassOf(Annotation( "EMAPA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) # Class: (pharyngeal membrane of 4th arch) AnnotationAssertion(Annotation( ) "A pharyngeal membrane that separates the fourth pharyngeal cleft from the fourth pharyngeal pouch.") AnnotationAssertion( "EMAPA:16763") AnnotationAssertion(Annotation( ) "4th pharyngeal membrane") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009217") AnnotationAssertion(rdfs:label "pharyngeal membrane of 4th arch") SubClassOf( ) SubClassOf(Annotation( "EMAPA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) # Class: (cartilaginous vertebral centrum) AnnotationAssertion(Annotation( ) Annotation( "VSAO:0000183") Annotation( "VSAO:curator"^^xsd:string) "Cartilaginous form of a vertebral centrum, a skeletal element that functionally replaces the notochord[VSAP,modified].") AnnotationAssertion( ) AnnotationAssertion( "cartilaginous centrum of vertebra") AnnotationAssertion(Annotation( ) "postcaudal cartilaginous centrum") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009291") AnnotationAssertion(rdfs:comment "cartilaginous centrum of vertebra[PMID:11746457]") AnnotationAssertion(rdfs:label "cartilaginous vertebral centrum") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (embryonic nasal process) AnnotationAssertion(Annotation( "EHDAA2"^^xsd:string) "medial or lateral; in EHDAA2 also frontonasal or intermaxillary") AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0000581") AnnotationAssertion( "EHDAA:4776") AnnotationAssertion( "EMAPA:16680") AnnotationAssertion( "FMA:293971") AnnotationAssertion( "uberon") AnnotationAssertion( "nasal placode") AnnotationAssertion( "UBERON:0009292") AnnotationAssertion(rdfs:label "embryonic nasal process") SubClassOf( ) # Class: (embryonic frontal process) AnnotationAssertion( ) AnnotationAssertion( "EHDAA:4780") AnnotationAssertion( "EMAPA:16802") AnnotationAssertion( "FMA:313738") AnnotationAssertion( "VHOG:0001323") AnnotationAssertion(Annotation( "VHOG:0001323") "frontal process") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009293") AnnotationAssertion(rdfs:label "embryonic frontal process") SubClassOf( ) SubClassOf(Annotation( "EMAPA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (basiotic bone) AnnotationAssertion(Annotation( ) "A small bone in the fetus between the basilar process and the basisphenoid.") AnnotationAssertion( ) AnnotationAssertion( "FMA:321631") AnnotationAssertion( "basiotic") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009468") AnnotationAssertion(rdfs:label "basiotic bone") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (postsphenoidal bone) AnnotationAssertion(Annotation( ) Annotation( ) "The posterior portion of the sphenoid bone developed in five separate parts consisting of a central basisphenoid, the two alisphenoids, and the two medial pterygoid laminae.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:321633") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009470") AnnotationAssertion(rdfs:label "postsphenoidal bone") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "MA"^^xsd:string) ) SubClassOf(Annotation( "cjm"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (dorsum of tongue) AnnotationAssertion(Annotation( ) "The superior surface of the tongue divided by the sulcus terminalis into an anterior two-thirds, the presulcal part (pars presulcalis). and a posterior one-third, the postsulcal part (pars postsulcalis).") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:54651") AnnotationAssertion( "NCIT:C32482") AnnotationAssertion(Annotation( "ncithesaurus:Dorsum_of_the_Tongue") "UMLS:C0226952") AnnotationAssertion(Annotation( "FMA:54651") "dorsal tongue") AnnotationAssertion(Annotation( ) "dorsum linguae") AnnotationAssertion(Annotation( "FMA:54651") "tongue dorsum") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009471") AnnotationAssertion(rdfs:label "dorsum of tongue") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (axilla) AnnotationAssertion(Annotation( ) "The axilla is the area directly under the joint where the forelimb connects to the shoulder.") AnnotationAssertion( "axillary") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "CALOHA:TS-2208") AnnotationAssertion( "EFO:0001395") AnnotationAssertion( "FMA:24864") AnnotationAssertion( "MESH:D001365") AnnotationAssertion( "NCIT:C12674") AnnotationAssertion(Annotation( "ncithesaurus:Axilla") "UMLS:C0004454") AnnotationAssertion( "galen:Axilla") AnnotationAssertion(Annotation( ) "arm pit") AnnotationAssertion(Annotation( ) "armpit") AnnotationAssertion(Annotation( "FMA:24864") "axillary region") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) Annotation( ) "regio axillaris") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "armpits") AnnotationAssertion(Annotation( ) Annotation( ) "axilla") AnnotationAssertion(Annotation( ) "axillae") AnnotationAssertion(Annotation( ) "axillary region") AnnotationAssertion(Annotation( ) "oxter") AnnotationAssertion(Annotation( ) "underarm") AnnotationAssertion( "UBERON:0009472") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "axilla") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/f/f2/Gray411.png"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (associated mesenchyme of otic placode) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "Mesenchyme that is part of a otic placode.") AnnotationAssertion( "EHDAA2:0001340") AnnotationAssertion( "EMAPA:16196") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009477") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "associated mesenchyme of otic placode") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (associated mesenchyme of midgut) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "Mesenchyme that is part of a developing midgut.") AnnotationAssertion( "previously logically defined as mesenchyme of midgut, but this caused disjointness violations between dense and loose mesenchyme") AnnotationAssertion( "EHDAA2:0001186") AnnotationAssertion( "EMAPA:16256") AnnotationAssertion(Annotation( "EHDAA2:0001186") "early midgut associated mesenchyme") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009478") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "associated mesenchyme of midgut") SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (ectoderm of buccopharyngeal membrane) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An ectoderm that is part of a buccopharyngeal membrane.") AnnotationAssertion( "EHDAA2:0000190") AnnotationAssertion( "EMAPA:16260") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009479") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "ectoderm of buccopharyngeal membrane") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (endoderm of buccopharyngeal membrane) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An endoderm that is part of a buccopharyngeal membrane.") AnnotationAssertion( "EHDAA2:0000191") AnnotationAssertion( "EMAPA:16261") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009480") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "endoderm of buccopharyngeal membrane") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (cavity of pericardio-peritoneal canal) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A tube lumen that is part of a pericardio-peritoneal canal.") AnnotationAssertion( "EHDAA2:0001441") AnnotationAssertion( "EMAPA:16283") AnnotationAssertion( "VHOG:0000564") AnnotationAssertion(Annotation( "VHOG:0000564") "cavity of the pericardio-peritoneal canal") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009481") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "cavity of pericardio-peritoneal canal") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (associated mesenchyme of foregut-midgut junction) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "Mesenchyme that is part of a foregut-midgut junction.") AnnotationAssertion( "EHDAA2:0000570") AnnotationAssertion( "EMAPA:16364") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009482") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "associated mesenchyme of foregut-midgut junction") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (mesentery of foregut-midgut junction) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A mesentery that is part of a foregut-midgut junction.") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000430") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0521617147 Stevens CE and Hume ID, Comparative physiology of the vertebrate digestive system (2004) p.11") "Although all vertebrates have a digestive tract and accessory glands, various parts of this system are not necessarily homologous, analogous, or even present in all species. Therefore, broad comparisons can be best made under the listings of headgut, foregut, midgut, pancreas and biliary system, hindgut.[uncertain][VHOG]") AnnotationAssertion( "EHDAA2:0000575") AnnotationAssertion( "EMAPA:16365") AnnotationAssertion( "VHOG:0000430") AnnotationAssertion(Annotation( "VHOG:0000430") "foregut-midgut junction mesentery") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009483") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "mesentery of foregut-midgut junction") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (dorsal mesentery of mesentery of foregut-midgut junction) AnnotationAssertion( "EHDAA2:0000571") AnnotationAssertion( "EMAPA:16366") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009484") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "dorsal mesentery of mesentery of foregut-midgut junction") SubClassOf( ) # Class: (pharyngeal arch mesenchymal region) AnnotationAssertion(Annotation( ) "A portion of mesenchymal tissue associated with an individual pharyngeal arch.") AnnotationAssertion(Annotation( "MP:0011262") "this represents a part of the entire arch mesenchyme (UBERON:0010046), and is therefore a superclass of the individual arch mesenchyme classes. Alternate definition: primordial embryonic connective tissue associated with the branchial arches, consisting of mesenchymal cells supported in interlaminar jelly, that derive mostly from the mesoderm and contribute to facial and cranial nerve-associated structures.") AnnotationAssertion( "EMAPA:32755") AnnotationAssertion( "FMA:295694") AnnotationAssertion(Annotation( "MP:0011262") "branchial arch mesenchyme") AnnotationAssertion(Annotation( ) "pharyngeal arch mesenchyme") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009494") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "pharyngeal arch mesenchymal region") SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "cjm"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (extrahepatic part of biliary bud) AnnotationAssertion( "EHDAA2:0000172") AnnotationAssertion( "EMAPA:16562") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009495") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "extrahepatic part of biliary bud") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (intrahepatic part of biliary bud) AnnotationAssertion( "EHDAA2:0000173") AnnotationAssertion( "EMAPA:16563") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009496") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "intrahepatic part of biliary bud") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (epithelium of foregut-midgut junction) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An epithelium that is part of a foregut-midgut junction.") AnnotationAssertion( "EHDAA2:0000573") AnnotationAssertion( "EMAPA:16564") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009497") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "epithelium of foregut-midgut junction") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (parietal of mesothelium of pericardio-peritoneal canal) AnnotationAssertion( "EHDAA2:0001409") AnnotationAssertion( "EMAPA:16590") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009499") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "parietal of mesothelium of pericardio-peritoneal canal") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (periotic mesenchyme) AnnotationAssertion(Annotation( ) Annotation( "XAO:0004474") Annotation( "XAO:curators") "Anatomical region that surrounds the otic vesicle.") AnnotationAssertion( "EHDAA2:0001343") AnnotationAssertion( "EMAPA:16670") AnnotationAssertion( "XAO:0004474") AnnotationAssertion(Annotation( "EHDAA2:0001343") "otocyst associated mesenchyme") AnnotationAssertion(Annotation( "EMAPA:16670") "otocyst mesenchyme") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "XAO:0004474") "periotic region") AnnotationAssertion( "UBERON:0009500") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "periotic mesenchyme") SubClassOf( ) SubClassOf(Annotation( "XAO"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (mesenchyme of fronto-nasal process) AnnotationAssertion(Annotation( "MP:0011266") "The embryonic connective tissue made up of loosely aggregated mesenchymal cells, supported by interlaminar jelly, that gives rise to the frontonasal region of the head.") AnnotationAssertion( "EHDAA2:0004109") AnnotationAssertion( "EMAPA:16683") AnnotationAssertion( "FMA:295821") AnnotationAssertion(Annotation( "MP:0011266") "frontonasal mesenchyme") AnnotationAssertion(Annotation( "MP:0011266") "naso-frontal mesenchyme") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009501") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "mesenchyme of fronto-nasal process") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (ventral mesentery of mesentery of foregut-midgut junction) AnnotationAssertion( "EMAPA:16714") AnnotationAssertion( "RETIRED_EHDAA2:0000576") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009502") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "ventral mesentery of mesentery of foregut-midgut junction") SubClassOf( ) # Class: (mesenchyme of hindgut) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "Mesenchyme that is part of a developing hindgut.") AnnotationAssertion( "EHDAA2:0000780") AnnotationAssertion( "EMAPA:16716") AnnotationAssertion(Annotation( "EHDAA2:0000780") "hindgut associated mesenchyme") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009503") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "mesenchyme of hindgut") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (mesenchyme of main bronchus) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "Mesenchyme that is part of a developing main bronchus.") AnnotationAssertion( "EHDAA2:0001045") AnnotationAssertion( "EMAPA:16850") AnnotationAssertion(Annotation( "EHDAA2:0001045") "main bronchus associated mesenchyme") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "EMAPA:16850") "primary bronchus mesenchyme") AnnotationAssertion(Annotation( "EMAPA:16850") "principal bronchus mesenchyme") AnnotationAssertion( "UBERON:0009504") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "mesenchyme of main bronchus") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (mesenchyme of trachea) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "Mesenchyme that is part of a developing trachea.") AnnotationAssertion( "EHDAA2:0002067") AnnotationAssertion( "EMAPA:16854") AnnotationAssertion(Annotation( "EHDAA2:0002067") "trachea associated mesenchyme") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009505") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "mesenchyme of trachea") SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (mesenchyme of middle ear) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "Mesenchyme that is part of a developing middle ear.") AnnotationAssertion(Annotation( "EHDAA2"^^xsd:string) "Also 1st arch maxillary mesenchyme in EHDAA2") AnnotationAssertion( "otic mesenchyme") AnnotationAssertion( "EHDAA2:0001182") AnnotationAssertion( "EMAPA:17001") AnnotationAssertion(Annotation( "EHDAA2:0001182") "middle ear associated mesenchyme") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009506") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "mesenchyme of middle ear") SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (anal membrane endodermal component) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An endoderm that is part of a anal region.") AnnotationAssertion( "EHDAA2:0004020") AnnotationAssertion( "EMAPA:17177") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009521") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "anal membrane endodermal component") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lateral lingual swelling epithelium) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An epithelium that is part of a lateral lingual swelling.") AnnotationAssertion( "EHDAA2:0000913") AnnotationAssertion( "EMAPA:17190") AnnotationAssertion( "FMA:313717") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009522") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "lateral lingual swelling epithelium") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (mesenchyme of handplate) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "Mesenchyme that is part of a handplate.") AnnotationAssertion(Annotation( "EMAPA"^^xsd:string) "We group two EMAPA classes here but these may need to be separated") AnnotationAssertion( "EHDAA2:0000731") AnnotationAssertion( "EMAPA:17248") AnnotationAssertion( "EMAPA:17457") AnnotationAssertion( "hand plate mesenchyme") AnnotationAssertion(Annotation( "EHDAA2:0000731") "handplate mesenchyme") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009523") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "mesenchyme of handplate") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (maxillary process mesenchyme) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "Mesenchyme that is part of a maxillary prominence.") AnnotationAssertion( "EHDAA2:0001071") AnnotationAssertion( "EMAPA:17361") AnnotationAssertion( "FMA:312691") AnnotationAssertion(Annotation( "EMAPA:17361") "mesenchyme of maxillary process") AnnotationAssertion(Annotation( ) "mesenchyme of maxillary prominence") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009526") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "maxillary process mesenchyme") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (vascular element of left lung) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A vascular plexus that is part of a left lung.") AnnotationAssertion( "EHDAA2:0000963") AnnotationAssertion( "EMAPA:17660") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009536") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "vascular element of left lung") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (vascular element of right lung) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A vascular plexus that is part of a right lung.") AnnotationAssertion( "EHDAA2:0001757") AnnotationAssertion( "EMAPA:17668") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009537") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "vascular element of right lung") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (mesenchyme of sublingual gland primordium) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "Mesenchyme that is part of a sublingual gland primordium.") AnnotationAssertion( "EHDAA2:0001937") AnnotationAssertion( "EMAPA:17754") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009538") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "mesenchyme of sublingual gland primordium") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (mesenchyme of submandibular gland primordium) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "Mesenchyme that is part of a submandibular gland primordium.") AnnotationAssertion( "EHDAA2:0001941") AnnotationAssertion( "EMAPA:17757") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "EMAPA:17757") "submaxillary gland primordium mesenchyme") AnnotationAssertion( "UBERON:0009539") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "mesenchyme of submandibular gland primordium") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (hepatic sinusoid of left of lobe of liver) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A hepatic sinusoid that is part of a left lobe of liver.") AnnotationAssertion( "EHDAA2:0001001") AnnotationAssertion( "EMAPA:18309") AnnotationAssertion( "VHOG:0000709") AnnotationAssertion(Annotation( "VHOG:0000709") "left lobe hepatic sinusoids") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009548") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "hepatic sinusoid of left of lobe of liver") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (hepatic sinusoid of right of lobe of liver) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A hepatic sinusoid that is part of a right lobe of liver.") AnnotationAssertion( "EHDAA2:0001009") AnnotationAssertion( "EMAPA:18316") AnnotationAssertion( "VHOG:0000710") AnnotationAssertion(Annotation( "VHOG:0000710") "right lobe hepatic sinusoids") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009549") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "hepatic sinusoid of right of lobe of liver") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (endoderm of foregut-midgut junction) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An endoderm that is part of a foregut-midgut junction.") AnnotationAssertion( "EHDAA2:0000572") AnnotationAssertion( "EMAPA:18403") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009550") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "endoderm of foregut-midgut junction") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (distal segment of digit) AnnotationAssertion(Annotation( ) "A segment of a digit containing the distal phalanx, and overlapping the distal interphalangeal joint[CJM]. The digit tip is derived from multiple and distinct embryonic origins, and includes the distal bone with associated marrow cavity and haematopoietic cells, ventral (flexor) and dorsal (extensor) tendons, sweat glands with myoepithelial and luminal secreting cells and associated neurons for innervation, dermis with resident melanocytes and dendritic cells, mesenchyme with resident fibroblasts, skin epidermis with hair follicles, a nail organ composed of six specific parts (the root, nail bed, nail plate, eponychium (cuticle), perionychium and hyponychium).") AnnotationAssertion( "Newborn and adult mice are able to regrow forelimb (finger) and hindlimb (toe) digit tips after their amputation through the distal interphalangeal joint. Regeneration of the digit tip involves the integrated regrowth of multiple tissues within 2-3 months, reaching an external morphology that is cosmetically and functionally similar to normal digits. Most importantly, regeneration of the mouse distal digit shares morphological similarities with clinical cases documenting regrowth of missing distal portions of fingers in both children and adults") AnnotationAssertion(Annotation( ) "digit tip") AnnotationAssertion(Annotation( ) "distal digit segment") AnnotationAssertion(Annotation( ) "tip of digit") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009551") AnnotationAssertion(rdfs:label "distal segment of digit") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) # Class: (distal segment of manual digit) AnnotationAssertion(Annotation( ) "A segment of the manual digit containing the distal phalanx.") AnnotationAssertion( "UBERON:0004093") AnnotationAssertion( ) AnnotationAssertion( "OpenCyc:Mx4rvVjpf5wpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( ) "finger digit tip") AnnotationAssertion(Annotation( ) "finger distal segment") AnnotationAssertion(Annotation( ) "finger tip") AnnotationAssertion(Annotation( "HP:0001211") "fingertip") AnnotationAssertion(Annotation( ) "forelimb digit tip") AnnotationAssertion( "tip of finger") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009552") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "distal segment of manual digit") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (distal segment of pedal digit) AnnotationAssertion(Annotation( ) "A segment of the pedal digit containing the distal phalanx. Note this class represents a digit segment and thus includes tissues in addition to bone.") AnnotationAssertion(Annotation( ) "hindlimb digit tip") AnnotationAssertion(Annotation( ) "tip of toe") AnnotationAssertion(Annotation( ) "toe digit tip") AnnotationAssertion(Annotation( ) "toe distal segment") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "P3 segment of pedal digit") AnnotationAssertion(Annotation( ) "distalmost part of toe") AnnotationAssertion( "UBERON:0009553") AnnotationAssertion(rdfs:label "distal segment of pedal digit") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete coffin bone) AnnotationAssertion(Annotation( ) "The bottommost bone in the equine leg and is encased by the hoof capsule. The distal phalanx articulates with both the middle phalanx and the distal sesamoid, forming the distal interphalangeal joint.") AnnotationAssertion( "UBERON:0014485") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009554") AnnotationAssertion(rdfs:comment "Was made obsolete in favor of the more generic grouping") AnnotationAssertion(rdfs:label "obsolete coffin bone") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (short pastern bone) AnnotationAssertion(Annotation( ) Annotation( ) "The middle phalanx of digit 3 in a horse.") AnnotationAssertion( "in future this may be merged into a species-neutral phalanx 2 digit III") AnnotationAssertion( ) AnnotationAssertion(Annotation( ) "equine middle phalanx") AnnotationAssertion(Annotation( ) "equine phalanx 2") AnnotationAssertion(Annotation( ) "equine phalanx 2 of digit III") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009555") AnnotationAssertion(rdfs:label "short pastern bone") SubClassOf( ) SubClassOf( ) # Class: (long pastern bone) AnnotationAssertion(Annotation( ) Annotation( ) "The proximal phalanx of digit 3 in a horse.") AnnotationAssertion( "in future this may be merged into a species-neutral phalanx 1 digit III") AnnotationAssertion( ) AnnotationAssertion(Annotation( ) "equine phalanx 1 of digit III") AnnotationAssertion(Annotation( ) "equine proximal phalanx") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009556") AnnotationAssertion(rdfs:label "long pastern bone") SubClassOf( ) SubClassOf( ) # Class: (obsolete coffin joint) AnnotationAssertion( "UBERON:0009768") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009557") AnnotationAssertion(rdfs:label "obsolete coffin joint") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (pastern bone) AnnotationAssertion(Annotation( ) Annotation( ) "A bone that is part of the pastern region of a horse limb. i.e. proximal or middle (P1 or P2) phalanges in digit 3.") AnnotationAssertion( "in future this may be merged into a more species-neutral class") AnnotationAssertion( ) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009558") AnnotationAssertion(rdfs:label "pastern bone") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/5/56/Equine-dist-forelimb-bones.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (metacarpal/tarsal-phalangeal joint) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A skeletal joint that connects a mesopodium bone and connects a proximal phalanx.") AnnotationAssertion( "We include these joints as being part of the digits; this is consistent with the FMA, and makes classification easier. Note that digit and metapodial regions are part-disjoint") AnnotationAssertion(Annotation( ) "metacarpo-tarsophalangeal joint") AnnotationAssertion(Annotation( ) "metapodial-phalangeal joint") AnnotationAssertion(Annotation( ) "metapodium-phalanx joint") AnnotationAssertion(Annotation( ) Annotation( ) Annotation( "NCBITaxon:9788"^^xsd:string) Annotation( ) "fetlock") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009559") AnnotationAssertion(rdfs:label "metacarpal/tarsal-phalangeal joint") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pastern region of limb) AnnotationAssertion(Annotation( ) "A part of the leg of a horse between the fetlock and the top of the hoof. It incorporates the long pastern bone (proximal phalanx) and the short pastern bone (middle phalanx), which are held together by two sets of paired ligaments to form the pastern joint (proximal interphalangeal joint).") AnnotationAssertion( "in future this may be merged into a more species-neutral class for the distal and medial segments of a digit.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009563") AnnotationAssertion(rdfs:label "pastern region of limb") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (distal limb integumentary appendage) AnnotationAssertion(Annotation( ) "A nail, hoof or claw.") AnnotationAssertion( "MESH:D006724") AnnotationAssertion( "uberon") AnnotationAssertion( "hoof or claw") AnnotationAssertion( "hoof, claw or nail") AnnotationAssertion( "keratin plate") AnnotationAssertion( "keratin sheath") AnnotationAssertion( "unguis") AnnotationAssertion( "UBERON:0009564") AnnotationAssertion(rdfs:label "distal limb integumentary appendage") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "cjm"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "Wikipathways:WP2062") ObjectSomeValuesFrom( )) # Class: (nail of manual digit) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A nail that is part of a manual digit.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:35349") AnnotationAssertion( "FMA:54327") AnnotationAssertion( "NCIT:C32609") AnnotationAssertion(Annotation( "ncithesaurus:Fingernail") "UMLS:C0222001") AnnotationAssertion(Annotation( "FMA:54327") "finger nail") AnnotationAssertion(Annotation( "FMA:54327") "fingernail") AnnotationAssertion(Annotation( "FMA:54327") "nail of finger") AnnotationAssertion(Annotation( ) "claw of hand") AnnotationAssertion(Annotation( ) "claw of manus") AnnotationAssertion(Annotation( "EMAPA:35349") Annotation( ) "forelimb digit claw") AnnotationAssertion(Annotation( ) "manual claw") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:54327") "nail plate of finger") AnnotationAssertion( "UBERON:0009565") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "nail of manual digit") SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (intestinal submucosa) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A submucosa that is part of a intestine.") AnnotationAssertion( "FMA:15696") AnnotationAssertion(Annotation( "FMA:15696") "submucosa of intestine") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009566") AnnotationAssertion(rdfs:label "intestinal submucosa") SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (nail of pedal digit) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A nail that is part of a pedal digit.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:36457") AnnotationAssertion( "FMA:54328") AnnotationAssertion( "NCIT:C33790") AnnotationAssertion(Annotation( "ncithesaurus:Toe_Nail") "UMLS:C0222007") AnnotationAssertion( "XAO:0003103") AnnotationAssertion( "nail of pes") AnnotationAssertion(Annotation( "FMA:54328") "nail of toe") AnnotationAssertion(Annotation( "FMA:54328") "toe nail") AnnotationAssertion(Annotation( "FMA:54328") "toenail") AnnotationAssertion(Annotation( ) "claw of foot") AnnotationAssertion(Annotation( ) "claw of pes") AnnotationAssertion(Annotation( ) "claw of toe") AnnotationAssertion(Annotation( "EMAPA:36457") Annotation( ) "hindlimb claw") AnnotationAssertion(Annotation( ) "hindlimb digit claw") AnnotationAssertion(Annotation( ) "pedal claw") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:54328") "nail plate of toe") AnnotationAssertion( "UBERON:0009567") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "nail of pedal digit") SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (trunk region of vertebral column) AnnotationAssertion(Annotation( "UBERONREF:0000006") "Subdivision of vertebral column that corresponds to the trunk of the body, containing the trunk/presacral vertebrae. In organisms that have a thoracic and lumbar distinction, this corresponds to the sum of both of these regions.") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0000612") Annotation( "AAO"^^xsd:string) Annotation( "AAO:Duellman_and_Trueb_1994"^^xsd:string) "Region of the vertebral column between the atlas and the sacrum consisting of seven to 285 vertebrae.[AAO]") AnnotationAssertion( ) AnnotationAssertion( "AAO:0000612") AnnotationAssertion( "FMA:72066") AnnotationAssertion( "NCIT:C92597") AnnotationAssertion( "thoracolumbar column") AnnotationAssertion( "thoracolumbar region of vertebral column") AnnotationAssertion(Annotation( "FMA:72066") "thoracolumbar vertebrae set") AnnotationAssertion( "thoracolumbar vertebral column") AnnotationAssertion( "trunk vertebrae series") AnnotationAssertion( "trunk vertebral column") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "AAO:0000612") "presacral region") AnnotationAssertion(Annotation( "AAO:0000612") "thoracolumbar region") AnnotationAssertion(Annotation( "AAO:0000612") "trunk region") AnnotationAssertion( "trunk skeleton") AnnotationAssertion( "trunk spine") AnnotationAssertion( "UBERON:0009568") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "trunk region of vertebral column") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (subdivision of trunk) AnnotationAssertion( ) AnnotationAssertion( "FMA:25054") AnnotationAssertion(Annotation( "FMA:25054") "region of trunk") AnnotationAssertion(Annotation( "FMA:25054") "trunk subdivision") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009569") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "subdivision of trunk") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (spinal cord sulcus limitans) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A sulcus limitans of neural tube that is part of a future spinal cord.") AnnotationAssertion( "EHDAA2:0001265") AnnotationAssertion( "EMAPA:17584") AnnotationAssertion( "VHOG:0001548") AnnotationAssertion(Annotation( "EHDAA2:0001265") "spinal cord lateral wall sulcus limitans") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009570") AnnotationAssertion(rdfs:label "spinal cord sulcus limitans") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (ventral midline) AnnotationAssertion(Annotation( ) Annotation( "GOC:bf") Annotation( "GOC:go_curators") "In protostomes (such as insects, snails and worms) as well as deuterostomes (vertebrates), the midline is an embryonic region that functions in patterning of the adjacent nervous tissue. The ventral midline in insects is a cell population extending along the ventral surface of the embryo and is the region from which cells detach to form the ventrally located nerve cords. In vertebrates, the midline is originally located dorsally. During development, it folds inwards and becomes the ventral part of the dorsally located neural tube and is then called the ventral midline, or floor plate.") AnnotationAssertion( "FBbt:00000093") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009571") AnnotationAssertion(rdfs:label "ventral midline") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lumen of central canal of spinal cord) AnnotationAssertion(Annotation( ) "A cerebrospinal fluid-filled space that runs longitudinally through the length of the entire spinal cord. The central canal is contiguous with the ventricular system of the brain. The central canal represents the adult remainder of the neural tube.") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:25042") AnnotationAssertion( "FMA:242845") AnnotationAssertion(Annotation( "FMA:242845") "cavity of central canal of spinal cord") AnnotationAssertion(Annotation( ) "central canal lumen") AnnotationAssertion(Annotation( "EMAPA:25042") "spinal cord lumen") AnnotationAssertion( "uberon") AnnotationAssertion( "neural lumen") AnnotationAssertion( "UBERON:0009572") AnnotationAssertion(rdfs:label "lumen of central canal of spinal cord") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (sulcus limitans of fourth ventricle) AnnotationAssertion(Annotation( ) "In the floor of the fourth ventricle, the sulcus limitans separates the cranial nerve motor nuclei (medial) from the sensory nuclei (lateral). In the superior part of the rhomboid fossa, it corresponds with the lateral limit of the fossa and presents a bluish-gray area, the locus ceruleus (which owes its color to an underlying patch of deeply pigmented nerve cells, termed the substantia ferruginea). [WP].") AnnotationAssertion(Annotation( "FMA:78496") "sulcus limitans") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:slim") AnnotationAssertion( "BAMS:slm") AnnotationAssertion( "DHBA:12823") AnnotationAssertion( "FMA:78496") AnnotationAssertion( "NCIT:C33656") AnnotationAssertion(Annotation( "ncithesaurus:Sulcus_Limitans") "UMLS:C0262332") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "s. limitans fossae rhomboideae") AnnotationAssertion( "UBERON:0009573") AnnotationAssertion(rdfs:label "sulcus limitans of fourth ventricle") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/7/77/Gray709.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (medulla oblongata sulcus limitans) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A sulcus limitans of neural tube that is part of a future medulla oblongata.") AnnotationAssertion( "EHDAA2:0001100") AnnotationAssertion( "EMAPA:17561") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009576") AnnotationAssertion(rdfs:label "medulla oblongata sulcus limitans") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (metencephalon sulcus limitans) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A sulcus limitans of neural tube that is part of a future metencephalon.") AnnotationAssertion( "EHDAA2:0001161") AnnotationAssertion( "EMAPA:17567") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009577") AnnotationAssertion(rdfs:label "metencephalon sulcus limitans") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (myelencephalon sulcus limitans) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A sulcus limitans of neural tube that is part of a future myelencephalon.") AnnotationAssertion( "EHDAA2:0001945") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009578") AnnotationAssertion(rdfs:label "myelencephalon sulcus limitans") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (myelencephalon basal plate) AnnotationAssertion( "TODO - check EHDAA2 post-CNS-revision") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000322") Annotation( "VHOG"^^xsd:string) Annotation( ) "The ventral half of the developing neural tube that is the myelencephalon. [Chordate_evolution_and_the_origin_of_craniates:_An_old_brain_in_a_new_head._AnaT_Rec_(New_Anat)_(2000)_261(3):_111-125, See_Butler_AB][VHOG]") AnnotationAssertion( "EHDAA2:0000646") AnnotationAssertion( "EMAPA:17088") AnnotationAssertion( "VHOG:0000322") AnnotationAssertion(Annotation( "VHOG:0000322") "basal plate myelencephalon") AnnotationAssertion(Annotation( "EHDAA2:0000646") "future myelencephalon basal plate") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009579") AnnotationAssertion(rdfs:label "myelencephalon basal plate") SubClassOf( ) # Class: (diencephalon mantle layer) AnnotationAssertion( "EHDAA2:0000397") AnnotationAssertion( "EMAPA:16906") AnnotationAssertion( "VHOG:0000912") AnnotationAssertion( "diencephalon lateral wall mantle layer") AnnotationAssertion(Annotation( "VHOG:0000912") "mantle layer lateral wall diencephalon") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009580") AnnotationAssertion(rdfs:label "diencephalon mantle layer") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (midbrain mantle layer) AnnotationAssertion( "EHDAA2:0001172") AnnotationAssertion( "EMAPA:16977") AnnotationAssertion( "VHOG:0000910") AnnotationAssertion(Annotation( "VHOG:0000910") "mantle layer lateral wall midbrain") AnnotationAssertion( "midbrain lateral wall mantle layer") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "VHOG:0000910") "mantle layer lateral wall mesencephalon") AnnotationAssertion( "UBERON:0009581") AnnotationAssertion(rdfs:label "midbrain mantle layer") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (spinal cord lateral wall) AnnotationAssertion( "EFO:0003602") AnnotationAssertion( "EMAPA:17579") AnnotationAssertion( "MA:0003192") AnnotationAssertion( "TAO:0000996") AnnotationAssertion( "ZFA:0000996") AnnotationAssertion(Annotation( "ZFA:0000996") "lateral wall spinal cord") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009582") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "spinal cord lateral wall") SubClassOf( ) SubClassOf(Annotation( "EMAPA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (spinal cord mantle layer) AnnotationAssertion( "EMAPA:17580") AnnotationAssertion( "VHOG:0000911") AnnotationAssertion(Annotation( "VHOG:0000911") "mantle layer lateral wall spinal cord") AnnotationAssertion( "spinal cord lateral wall mantle layer") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009583") AnnotationAssertion(rdfs:label "spinal cord mantle layer") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (1st arch mandibular mesenchyme) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "Mesenchyme that is part of a 1st arch mandibular component.") AnnotationAssertion( "UBERON:0010043") AnnotationAssertion( "EHDAA2:0000034") AnnotationAssertion( "EMAPA:16385") AnnotationAssertion(Annotation( ) "mesenchymal region of mandibular component of first pharyngeal arch") AnnotationAssertion(Annotation( "EMAPA:16385") "mesenchyme of mandibular component") AnnotationAssertion( "uberon") AnnotationAssertion( "mandibular component mesenchyme") AnnotationAssertion( "mandibular mesenchyme") AnnotationAssertion( "UBERON:0009584") AnnotationAssertion(rdfs:label "1st arch mandibular mesenchyme") SubClassOf( ) SubClassOf(Annotation( "EMAPA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (interdigital region mesenchyme) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "Mesenchyme that is part of a developing interdigital region.") AnnotationAssertion( "EMAPA:32609") AnnotationAssertion( "interdigital mesenchyme") AnnotationAssertion( "mesenchyme of interdigital region") AnnotationAssertion( "uberon") AnnotationAssertion( "interdigit mesenchyme") AnnotationAssertion( "UBERON:0009585") AnnotationAssertion(rdfs:comment "influences identity of anterior digit[Dahn and Fallon 2000], likely via BMP4") AnnotationAssertion(rdfs:label "interdigital region mesenchyme") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (mesenchyme of interdigital region between manual digits 1 and 2) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An interdigital region mesenchyme that is part of a interdigital region between manual digits 1 and 2.") AnnotationAssertion( "EHDAA2:0000846") AnnotationAssertion( "EMAPA:17447") AnnotationAssertion(Annotation( "EHDAA2:0000846") "interdigital region between fingers 1 and 2 mesenchyme") AnnotationAssertion(Annotation( ) Annotation( ) "mesenchyme of interdigital region between manual digits I and II") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009586") AnnotationAssertion(rdfs:label "mesenchyme of interdigital region between manual digits 1 and 2") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "EMAPA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (mesenchyme of interdigital region between manual digits 2 and 3) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An interdigital region mesenchyme that is part of a interdigital region between manual digits 2 and 3.") AnnotationAssertion( "EHDAA2:0000849") AnnotationAssertion( "EMAPA:17450") AnnotationAssertion(Annotation( "EHDAA2:0000849") "interdigital region between fingers 2 and 3 mesenchyme") AnnotationAssertion(Annotation( ) Annotation( ) "mesenchyme of interdigital region between manual digits II and III") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009587") AnnotationAssertion(rdfs:label "mesenchyme of interdigital region between manual digits 2 and 3") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "EMAPA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (mesenchyme of interdigital region between manual digits 3 and 4) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An interdigital region mesenchyme that is part of a interdigital region between manual digits 3 and 4.") AnnotationAssertion( "EHDAA2:0000852") AnnotationAssertion( "EMAPA:17453") AnnotationAssertion(Annotation( "EHDAA2:0000852") "interdigital region between fingers 3 and 4 mesenchyme") AnnotationAssertion(Annotation( ) Annotation( ) "mesenchyme of interdigital region between manual digits III and IV") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009588") AnnotationAssertion(rdfs:label "mesenchyme of interdigital region between manual digits 3 and 4") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "EMAPA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (mesenchyme of interdigital region between manual digits 4 and 5) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An interdigital region mesenchyme that is part of a interdigital region between manual digits 4 and 5.") AnnotationAssertion( "EHDAA2:0000855") AnnotationAssertion( "EMAPA:17456") AnnotationAssertion(Annotation( "EHDAA2:0000855") "interdigital region between fingers 4 and 5 mesenchyme") AnnotationAssertion(Annotation( ) Annotation( ) "mesenchyme of interdigital region between manual digits IV and V") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009589") AnnotationAssertion(rdfs:label "mesenchyme of interdigital region between manual digits 4 and 5") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "EMAPA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (mesenchyme of interdigital region between pedal digits 1 and 2) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An interdigital region mesenchyme that is part of a interdigital region between pedal digits 1 and 2.") AnnotationAssertion( "EHDAA2:0000858") AnnotationAssertion( "EMAPA:17478") AnnotationAssertion(Annotation( "EHDAA2:0000858") "interdigital region between toes 1 and 2 mesenchyme") AnnotationAssertion(Annotation( ) Annotation( ) "mesenchyme of interdigital region between pedal digits I and II") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009590") AnnotationAssertion(rdfs:label "mesenchyme of interdigital region between pedal digits 1 and 2") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "EMAPA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (mesenchyme of interdigital region between pedal digits 2 and 3) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An interdigital region mesenchyme that is part of a interdigital region between pedal digits 2 and 3.") AnnotationAssertion( "EHDAA2:0000861") AnnotationAssertion( "EMAPA:17481") AnnotationAssertion(Annotation( "EHDAA2:0000861") "interdigital region between toes 2 and 3 mesenchyme") AnnotationAssertion(Annotation( ) Annotation( ) "mesenchyme of interdigital region between pedal digits II and III") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009591") AnnotationAssertion(rdfs:label "mesenchyme of interdigital region between pedal digits 2 and 3") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "EMAPA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (mesenchyme of interdigital region between pedal digits 3 and 4) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An interdigital region mesenchyme that is part of a interdigital region between pedal digits 3 and 4.") AnnotationAssertion( "EHDAA2:0000864") AnnotationAssertion( "EMAPA:17484") AnnotationAssertion(Annotation( "EHDAA2:0000864") "interdigital region between toes 3 and 4 mesenchyme") AnnotationAssertion(Annotation( ) Annotation( ) "mesenchyme of interdigital region between pedal digits III and IV") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009592") AnnotationAssertion(rdfs:label "mesenchyme of interdigital region between pedal digits 3 and 4") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "EMAPA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (mesenchyme of interdigital region between pedal digits 4 and 5) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An interdigital region mesenchyme that is part of a interdigital region between pedal digits 4 and 5.") AnnotationAssertion( "EHDAA2:0000867") AnnotationAssertion( "EMAPA:17487") AnnotationAssertion(Annotation( "EHDAA2:0000867") "interdigital region between toes 4 and 5 mesenchyme") AnnotationAssertion(Annotation( ) Annotation( ) "mesenchyme of interdigital region between pedal digits IV and V") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009593") AnnotationAssertion(rdfs:label "mesenchyme of interdigital region between pedal digits 4 and 5") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "EMAPA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (mesenchyme of interdigital region between digits 1 and 2) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An interdigital region mesenchyme that is part of a interdigital region between digits 1 and 2.") AnnotationAssertion(Annotation( ) Annotation( ) "mesenchyme of interdigital region between digits I and II") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009596") AnnotationAssertion(rdfs:label "mesenchyme of interdigital region between digits 1 and 2") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (mesenchyme of interdigital region between digits 2 and 3) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An interdigital region mesenchyme that is part of a interdigital region between digits 2 and 3.") AnnotationAssertion(Annotation( ) Annotation( ) "mesenchyme of interdigital region between digits II and III") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009597") AnnotationAssertion(rdfs:label "mesenchyme of interdigital region between digits 2 and 3") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (mesenchyme of interdigital region between digits 3 and 4) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An interdigital region mesenchyme that is part of a interdigital region between digits 3 and 4.") AnnotationAssertion(Annotation( ) Annotation( ) "mesenchyme of interdigital region between digits III and IV") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009598") AnnotationAssertion(rdfs:label "mesenchyme of interdigital region between digits 3 and 4") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (mesenchyme of interdigital region between digits 4 and 5) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An interdigital region mesenchyme that is part of a interdigital region between digits 4 and 5.") AnnotationAssertion(Annotation( ) Annotation( ) "mesenchyme of interdigital region between digits IV and V") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009599") AnnotationAssertion(rdfs:label "mesenchyme of interdigital region between digits 4 and 5") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (mesenchyme of interdigital region of manus) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An interdigital region mesenchyme that is part of a manus.") AnnotationAssertion( "EMAPA:32653") AnnotationAssertion( "mesenchyme of interdigital region of forelimb") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009600") AnnotationAssertion(rdfs:label "mesenchyme of interdigital region of manus") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (mesenchyme of interdigital region of pes) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An interdigital region mesenchyme that is part of a pes.") AnnotationAssertion( "EMAPA:32955") AnnotationAssertion( "mesenchyme of interdigital region of hindlimb") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009601") AnnotationAssertion(rdfs:label "mesenchyme of interdigital region of pes") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (left lung associated mesenchyme) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "Mesenchyme that is part of a developing left lung.") AnnotationAssertion( "EHDAA2:0000944") AnnotationAssertion( "EMAPA:16730") AnnotationAssertion( "EMAPA:17654") AnnotationAssertion(Annotation( "EMAPA:17654") "left lung mesenchyme") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009602") AnnotationAssertion(rdfs:label "left lung associated mesenchyme") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (right lung associated mesenchyme) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "Mesenchyme that is part of a developing right lung.") AnnotationAssertion( "EHDAA2:0001739") AnnotationAssertion( "EMAPA:17662") AnnotationAssertion(Annotation( "EMAPA:17662") "right lung mesenchyme") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009603") AnnotationAssertion(rdfs:label "right lung associated mesenchyme") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (forebrain neural plate) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A neural plate that develops_from a future forebrain.") AnnotationAssertion( "TAO:0007018") AnnotationAssertion( "ZFA:0007018") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009610") AnnotationAssertion(rdfs:label "forebrain neural plate") SubClassOf( ) SubClassOf(Annotation( "ZFA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (midbrain neural plate) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A neural plate that develops_from a presumptive midbrain.") AnnotationAssertion( "TAO:0007019") AnnotationAssertion( "ZFA:0007019") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009611") AnnotationAssertion(rdfs:label "midbrain neural plate") SubClassOf( ) SubClassOf(Annotation( "ZFA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (forebrain midbrain boundary neural plate) AnnotationAssertion( "TAO:0007020") AnnotationAssertion( "ZFA:0007020") AnnotationAssertion(Annotation( "ZFA:0007020") "diencephalic-mesencephalic boundary neural plate") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009612") AnnotationAssertion(rdfs:label "forebrain midbrain boundary neural plate") SubClassOf(Annotation( "ZFA"^^xsd:string) ) SubClassOf(Annotation( "ZFA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "ZFA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (hindbrain neural plate) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A neural plate that develops_from a presumptive hindbrain.") AnnotationAssertion( "TAO:0007022") AnnotationAssertion( "ZFA:0007022") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009614") AnnotationAssertion(rdfs:label "hindbrain neural plate") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "ZFA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (midbrain hindbrain boundary neural plate) AnnotationAssertion( "TODO - developmental relationships for lines") AnnotationAssertion( "TAO:0007044") AnnotationAssertion( "ZFA:0007044") AnnotationAssertion(Annotation( ) "MHB neural plate") AnnotationAssertion(Annotation( "ZFA:0007044") "midbrain-hindbrain boundary neural plate") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009615") AnnotationAssertion(rdfs:label "midbrain hindbrain boundary neural plate") SubClassOf( ) SubClassOf(Annotation( "ZFA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "https://github.com/obophenotype/uberon/issues/438") Annotation( "Bgee:AN"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (presumptive midbrain) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A presumptive structure that has the potential to develop into a midbrain.") AnnotationAssertion( "TODO - unify naming conventions") AnnotationAssertion( ) AnnotationAssertion( "BAMS:MES") AnnotationAssertion( "EFO:0003432") AnnotationAssertion( "EHDAA2:0000615") AnnotationAssertion( "EMAPA:16140") AnnotationAssertion( "TAO:0000148") AnnotationAssertion( "ZFA:0000148") AnnotationAssertion(Annotation( "ZFA:0000148") "presumptive mesencephalon") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "early midbrain") AnnotationAssertion(Annotation( ) "future midbrain") AnnotationAssertion(Annotation( "EHDAA2:0000615") "mesencephalon") AnnotationAssertion( "UBERON:0009616") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "presumptive midbrain") SubClassOf( ) SubClassOf(Annotation( "ZFA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "ZFA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (head paraxial mesoderm) AnnotationAssertion(Annotation( ) "Bilateral mesenchymal mesoderm parallel and immediately adjacent to the neural tube/notochord; it generates a subset of extra-ocular, and other head, muscles.") AnnotationAssertion( "A major contributor to neurocranium [PMID:16313393]") AnnotationAssertion( "EHDAA2:0000736") AnnotationAssertion( "EHDAA:364") AnnotationAssertion( "EMAPA:16171") AnnotationAssertion(Annotation( ) "cephalic paraxial mesenchyme") AnnotationAssertion(Annotation( ) "cephalic paraxial mesoderm") AnnotationAssertion(Annotation( ) "cranial paraxial mesenchyme") AnnotationAssertion(Annotation( ) "cranial paraxial mesoderm") AnnotationAssertion(Annotation( ) Annotation( "EHDAA2:0000736") "head paraxial mesenchyme") AnnotationAssertion( "uberon") AnnotationAssertion( "somitomere") AnnotationAssertion( "somitomeric mesoderm") AnnotationAssertion( "UBERON:0009617") AnnotationAssertion(rdfs:label "head paraxial mesoderm") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (trunk paraxial mesoderm) AnnotationAssertion( "EHDAA2:0002094") AnnotationAssertion(Annotation( "EHDAA2:0002094") "trunk and cervical paraxial mesenchyme") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "trunk paraxial mesenchyme") AnnotationAssertion( "UBERON:0009618") AnnotationAssertion(rdfs:label "trunk paraxial mesoderm") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (pronephric proximal straight tubule) AnnotationAssertion(Annotation( "ZFIN:ZDB-PUB-071029-9") "A proximal straight tubule that is part of a pronephros.") AnnotationAssertion( "TAO:0002239") AnnotationAssertion( "ZFA:0001621") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "TAO:0002239") Annotation( ) "proximal straight tubules") AnnotationAssertion( "UBERON:0009622") AnnotationAssertion(rdfs:label "pronephric proximal straight tubule") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (spinal nerve root) AnnotationAssertion(Annotation( "MESH:A08.800.800.720.725") "The paired bundles of nerve fibers entering and leaving the spinal cord at each segment. The dorsal and ventral nerve roots join to form the mixed segmental spinal nerves. The dorsal roots are generally afferent, formed by the central projections of the spinal (dorsal root) ganglia sensory cells, and the ventral roots efferent, comprising the axons of spinal motor and autonomic preganglionic neurons. There are, however, some exceptions to this afferent/efferent rule.") AnnotationAssertion(Annotation( "ZFA"^^xsd:string) "ZFA has part_of to spinal cord but this causes spatial disjointness violations (CNS/PNS)") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0000883") AnnotationAssertion( "DHBA:146035120") AnnotationAssertion( "FMA:14060") AnnotationAssertion( "GAID:717") AnnotationAssertion( "MESH:D013126") AnnotationAssertion( "NCIT:C12791") AnnotationAssertion(Annotation( "ncithesaurus:Spinal_Nerve_Root") "UMLS:C0037940") AnnotationAssertion( "ZFA:0005578") AnnotationAssertion(Annotation( "FMA:14060") "root of spinal nerve") AnnotationAssertion(Annotation( "FMA:14060") "spinal neural root") AnnotationAssertion(Annotation( "BTO:0000883") "spinal root") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009623") AnnotationAssertion(rdfs:label "spinal nerve root") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lumbar nerve) AnnotationAssertion(Annotation( ) "The lumbar nerves are the five spinal nerves emerging from the lumbar vertebrae. They are divided into posterior and anterior divisions.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:5861") AnnotationAssertion( "NCIT:C33015") AnnotationAssertion(Annotation( "ncithesaurus:Lumbar_Nerve") "UMLS:C0228897") AnnotationAssertion(Annotation( "FMA:5861") "lumbar spinal nerve") AnnotationAssertion(Annotation( "FMA:5861") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "nervus lumbalis") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "nervi lumbales") AnnotationAssertion( "UBERON:0009624") AnnotationAssertion(rdfs:label "lumbar nerve") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/d/d1/Gray802.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (sacral nerve) AnnotationAssertion(Annotation( ) "The five sacral nerves emerge from the sacrum. Although the vertebral components of the sacrum are fused into a single bone, the sacral vertebrae are still used to number the sacral nerves. Posteriorly, they emerge from the posterior sacral foramina, and form the posterior branches of sacral nerves. Anteriorly, they emerge from the anterior sacral foramina, and contribute to the sacral plexus (S1-S4) and coccygeal plexus.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:5862") AnnotationAssertion( "NCIT:C33505") AnnotationAssertion(Annotation( "ncithesaurus:Sacral_Nerve") "UMLS:C0228922") AnnotationAssertion(Annotation( "FMA:5862") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "nervus sacralis") AnnotationAssertion(Annotation( "FMA:5862") "sacral spinal nerve") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "nervi sacrales") AnnotationAssertion( "UBERON:0009625") AnnotationAssertion(rdfs:label "sacral nerve") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/d/d1/Gray802.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (coccygeal nerve) AnnotationAssertion(Annotation( ) "The coccygeal nerve is the spinal nerve that corresponds to the coccyx bone.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:5863") AnnotationAssertion( "NCIT:C32333") AnnotationAssertion(Annotation( "ncithesaurus:Coccygeal_Nerve") "UMLS:C0228967") AnnotationAssertion(Annotation( "FMA:5863") "coccygeal spinal nerve") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "nervus coccygeus") AnnotationAssertion( "UBERON:0009629") AnnotationAssertion(rdfs:label "coccygeal nerve") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/d/d1/Gray802.png"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "FMA-abduced-lr"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (root of thoracic nerve) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A spinal nerve root that is part of a thoracic nerve.") AnnotationAssertion( "BIRNLEX:836") AnnotationAssertion( "FMA:14064") AnnotationAssertion(Annotation( "NIF:NIF") "nerve root part of thoracic spinal cord") AnnotationAssertion(Annotation( "FMA:14064") "thoracic nerve root") AnnotationAssertion(Annotation( "FMA:14064") "thoracic neural root") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009630") AnnotationAssertion(rdfs:label "root of thoracic nerve") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (root of lumbar spinal nerve) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A spinal nerve root that is part of a lumbar nerve.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:1613") AnnotationAssertion( "FMA:16421") AnnotationAssertion( "NCIT:C12924") AnnotationAssertion(Annotation( "ncithesaurus:Lumbar_Spinal_Nerve_Root") "UMLS:C0581666") AnnotationAssertion(Annotation( "FMA:16421") "lumbar spinal nerve root") AnnotationAssertion(Annotation( "FMA:16421") "lumbar spinal neural root") AnnotationAssertion(Annotation( "NIF:NIF") "nerve root part of lumbar spinal cord") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009631") AnnotationAssertion(rdfs:label "root of lumbar spinal nerve") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (root of cervical nerve) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:955") AnnotationAssertion( "FMA:16422") AnnotationAssertion( "NCIT:C12893") AnnotationAssertion(Annotation( "ncithesaurus:Cervical_Spinal_Nerve_Root") "UMLS:C0581631") AnnotationAssertion(Annotation( "FMA:16422") "cervical neural root") AnnotationAssertion(Annotation( "FMA:16422") "cervical spinal root") AnnotationAssertion(Annotation( "NIF:NIF") "nerve root part of cervical spinal cord") AnnotationAssertion(Annotation( "FMA:16422") "root of cervical spinal nerve") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009632") AnnotationAssertion(rdfs:label "root of cervical nerve") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (root of sacral nerve) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A spinal nerve root that is part of a sacral nerve.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:1518") AnnotationAssertion( "FMA:18028") AnnotationAssertion( "NCIT:C12925") AnnotationAssertion(Annotation( "ncithesaurus:Sacral_Spinal_Nerve_Root") "UMLS:C0581672") AnnotationAssertion(Annotation( "NIF:NIF") "nerve root part of sacral spinal cord") AnnotationAssertion(Annotation( "FMA:18028") "root of sacral spinal nerve") AnnotationAssertion(Annotation( "FMA:18028") "sacral neural root") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009633") AnnotationAssertion(rdfs:label "root of sacral nerve") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses(Annotation( "NIFSTD"^^xsd:string) ) # Class: (root of coccygeal nerve) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A spinal nerve root that is part of a coccygeal nerve.") AnnotationAssertion( "FMA:18131") AnnotationAssertion(Annotation( "FMA:18131") "coccygeal neural root") AnnotationAssertion(Annotation( "FMA:18131") "coccygeal spinal nerve root") AnnotationAssertion(Annotation( "FMA:18131") "root of coccygeal spinal nerve") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009634") AnnotationAssertion(rdfs:label "root of coccygeal nerve") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (parachordal cartilage) AnnotationAssertion(Annotation( ) Annotation( "ISBN:1588903958") "Chondrocranium chondrification center that fuses with cartilages derived from sclerotome region of occipital somites forming occipital bone, hypoglossal canals and foramen magnum.") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0001423") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "Rod-shaped paired cartilages on either side of the notochord. They unite, forming the base of the chondrocranium and are replaced by the prootic bones.[TAO]") AnnotationAssertion( ) AnnotationAssertion( "NCIT:C34243") AnnotationAssertion( "TAO:0001423") AnnotationAssertion(Annotation( "ncithesaurus:Parachordal_Cartilage") "UMLS:C1518887") AnnotationAssertion( "ZFA:0001423") AnnotationAssertion(Annotation( "ZFA:0001423") Annotation( ) "parachordal cartilages") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009635") AnnotationAssertion(rdfs:label "parachordal cartilage") SubClassOf(Annotation( "ZFA"^^xsd:string) ) SubClassOf( ) SubClassOf(Annotation( "ZFA"^^xsd:string) ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) SubClassOf(Annotation( "ZFA"^^xsd:string) ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) # Class: (prechordal cartilage) AnnotationAssertion(Annotation( ) Annotation( "ISBN:1588903958") "Chondrocranium chondrification center that that forms anterior body of sphenoid, containing the sella turcica and posterior body of sphenoid.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009636") AnnotationAssertion(rdfs:comment "classified as part of chondrocranium based on developmental relationships") AnnotationAssertion(rdfs:label "prechordal cartilage") SubClassOf( ) # Class: (alisphenoid ossification center) AnnotationAssertion( "uberon") AnnotationAssertion( "alisphenoid center") AnnotationAssertion( "UBERON:0009637") AnnotationAssertion(rdfs:label "alisphenoid ossification center") SubClassOf( ) # Class: (orbitosphenoid ossification center) AnnotationAssertion( "uberon") AnnotationAssertion( "orbitosphenoid center") AnnotationAssertion( "UBERON:0009638") AnnotationAssertion(rdfs:comment "merge with sphenoid lesser wing cartilage element?") AnnotationAssertion(rdfs:label "orbitosphenoid ossification center") SubClassOf( ) # Class: (body of sphenoid) AnnotationAssertion(Annotation( ) "The body of the sphenoid bone, more or less cubical in shape, is hollowed out in its interior to form two large cavities, the sphenoidal air sinuses, which are separated from each other by a septum.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:52867") AnnotationAssertion( "Entire body of sphenoid bone") AnnotationAssertion(Annotation( "FMA:52867") "body of sphenoidal bone") AnnotationAssertion(Annotation( "FMA:52867") "central body of sphenoid") AnnotationAssertion(Annotation( "FMA:52867") "corpus (os sphenoidale)") AnnotationAssertion(Annotation( "FMA:52867") "sphenoid body") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "corpus ossis sphenoidalis") AnnotationAssertion( "UBERON:0009639") AnnotationAssertion(rdfs:label "body of sphenoid") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/d/d5/Gray146.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "ISBN:1588903958") ObjectSomeValuesFrom( )) SubClassOf(Annotation( "ISBN:1588903958") ObjectSomeValuesFrom( )) # Class: (hypophyseal cartilage) AnnotationAssertion(Annotation( "ISBN:1588903958") "Forms around the developing pituitary, and together with prechordal cartilages creates body of sphenoid bone.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009640") AnnotationAssertion(rdfs:comment "classified as part of chondrocranium based on developmental relationships") AnnotationAssertion(rdfs:label "hypophyseal cartilage") SubClassOf( ) # Class: (ansa lenticularis) AnnotationAssertion(Annotation( ) "The ansa lenticularis (ansa lentiformis in older texts) is a part of the brain, making up the superior layer of the substantia innominata of Meynert. Its fibers, derived from the medullary lamina of the lentiform nucleus, pass medially to end in the thalamus and subthalamic region, while others are said to end in the tegmentum and red nucleus. It is classified by NeuroNames as part of the subthalamus.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:al") AnnotationAssertion( "DHBA:10571") AnnotationAssertion( "FMA:62070") AnnotationAssertion( "HBA:9237") AnnotationAssertion( "NLXANAT:1010011") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) Annotation( ) "ansa lenticularis in thalamo") AnnotationAssertion(Annotation( "FMA:62070") "ansa lenticularis in thalamus") AnnotationAssertion(Annotation( "FMA:62070") "ventral peduncle of lateral forebrain bundle") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009641") AnnotationAssertion(rdfs:label "ansa lenticularis") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/9/94/DA-loops_in_PD.jpg"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (central tegmental tract) AnnotationAssertion(Annotation( "NLXANAT:1010012") "A pathway containing fibers from midbrain nuclei that project to the inferior olivary complex, as well as fibers originating in the pontine reticular formation and the medullary reticular formation that project to several nuclei of the thalamus. It can be identified in the midbrain and the pons (Adapted from Brain Info).") AnnotationAssertion(Annotation( ) "The central tegmental tract is a structure in the midbrain and pons. The central tegmental tract includes ascending axonal fibers which arise from the rostral nucleus solitarius and terminate in the ventral posteromedial nucleus (VPM) of thalamus. Information from the thalamus will go to cortical taste area, namely the insula and frontal operculum. It also contains descending axonal fibers from the parvocellular red nucleus. The descending axons will project to the inferior olivary nucleus. This latter pathway will be used to connect the contralateral cerebellum[Wikipedia:Central_tegmental_tract].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:ctg") AnnotationAssertion( "DHBA:12730") AnnotationAssertion( "FMA:83850") AnnotationAssertion( "HBA:12952") AnnotationAssertion( "NLXANAT:1010012") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009643") AnnotationAssertion(rdfs:label "central tegmental tract") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/f/f7/Midbrainsuperiorcolliculus.png"^^xsd:anyURI) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf(Annotation( "NIFSTD"^^xsd:string) ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) SubClassOf(Annotation( "NIFSTD"^^xsd:string) ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) # Class: (trachea non-cartilage connective tissue) AnnotationAssertion( "EMAPA:35878") AnnotationAssertion( "MA:0001859") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009644") AnnotationAssertion(rdfs:label "trachea non-cartilage connective tissue") SubClassOf(Annotation( "MA"^^xsd:string) ) # Class: (lumbar sympathetic nerve trunk) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A sympathetic nerve trunk that is part of a lower back.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37655") AnnotationAssertion( "FMA:6263") AnnotationAssertion( "MA:0001163") AnnotationAssertion( "NCIT:C52828") AnnotationAssertion(Annotation( "ncithesaurus:Lumbar_Sympathetic_Nerve_Trunk") "UMLS:C1708762") AnnotationAssertion(Annotation( "FMA:6263") "lumbar sympathetic trunk") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:6263") "lumbar part of sympathetic trunk") AnnotationAssertion(Annotation( "FMA:6263") "lumbar sympathetic chain") AnnotationAssertion( "UBERON:0009646") AnnotationAssertion(rdfs:label "lumbar sympathetic nerve trunk") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (tympanic membrane epithelium) AnnotationAssertion(Annotation( ) Annotation( ) "One of the two epithelia which make up the tympanic membrane (along with the fibrous layer).") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:19064") AnnotationAssertion( "MA:0001224") AnnotationAssertion( "NCIT:C49308") AnnotationAssertion(Annotation( "ncithesaurus:Tympanic_Epithelium") "UMLS:C1711401") AnnotationAssertion(Annotation( "MA:0001224") "tympanic epithelium") AnnotationAssertion( "tympanic membrane epithelial layer") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009647") AnnotationAssertion(rdfs:label "tympanic membrane epithelium") SubClassOf( ) SubClassOf( ) DisjointClasses( ) # Class: (eyelid subcutaneous connective tissue) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An eyelid connective tissue that is part of a hypodermis.") AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37533") AnnotationAssertion( "FMA:63975") AnnotationAssertion( "MA:0001252") AnnotationAssertion( "NCIT:C49226") AnnotationAssertion(Annotation( "ncithesaurus:Eyelid_Subcutaneous_Connective_Tissue") "UMLS:C1707991") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:63975") "superficial fascia of eyelid") AnnotationAssertion( "UBERON:0009648") AnnotationAssertion(rdfs:label "eyelid subcutaneous connective tissue") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (cortical arch of kidney) AnnotationAssertion(Annotation( ) "The portions of renal substance (cortex) intervening between the bases of the pyramids and the capsule of the kidney.") AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37486") AnnotationAssertion( "FMA:17876") AnnotationAssertion( "MA:0001650") AnnotationAssertion( "NCIT:C32385") AnnotationAssertion(Annotation( "ncithesaurus:Cortical_Arch") "UMLS:C1511525") AnnotationAssertion(Annotation( "FMA:17876") "renal cortex proper") AnnotationAssertion(Annotation( "FMA:17876") "renal cortical arch") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:17876") "cortex proper of kidney") AnnotationAssertion(Annotation( ) "cortical arches of kidney") AnnotationAssertion( "UBERON:0009650") AnnotationAssertion(rdfs:label "cortical arch of kidney") SubClassOf( ) SubClassOf(Annotation( "MA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (nephron tubule basement membrane) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A basement membrane that is part of a nephron tubule.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37490") AnnotationAssertion( "MA:0001680") AnnotationAssertion( "NCIT:C49273") AnnotationAssertion(Annotation( "ncithesaurus:Renal_Tubule_Basement_Membrane") "UMLS:C1709901") AnnotationAssertion(Annotation( "MA:0001680") "kidney tubule basement membrane") AnnotationAssertion( "renal tubular basement membrane") AnnotationAssertion(Annotation( "MA:0001680") "renal tubule basement membrane") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009651") AnnotationAssertion(rdfs:label "nephron tubule basement membrane") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (bronchus basement membrane) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A basement membrane that is part of a bronchus.") AnnotationAssertion(Annotation( "MA"^^xsd:string) "MA classifies as type of connective tissue: https://github.com/obophenotype/mouse-anatomy-ontology/issues/108") AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37809") AnnotationAssertion( "MA:0001832") AnnotationAssertion( "NCIT:C49208") AnnotationAssertion(Annotation( "ncithesaurus:Bronchus_Basement_Membrane") "UMLS:C1707051") AnnotationAssertion(Annotation( ) "bronchial basement membrane") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009652") AnnotationAssertion(rdfs:label "bronchus basement membrane") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (trachea basement membrane) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A basement membrane that is part of a trachea.") AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37552") AnnotationAssertion( "MA:0001854") AnnotationAssertion( "NCIT:C49302") AnnotationAssertion(Annotation( "ncithesaurus:Trachea_Basement_Membrane") "UMLS:C1710455") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009653") AnnotationAssertion(rdfs:label "trachea basement membrane") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "MA-modified"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (alveolar artery) AnnotationAssertion(Annotation( "ncithesaurus:Alveolar_Artery") "A branch of the maxillary artery that is found in the gingiva, premolars, and molars.") AnnotationAssertion( "add child terms") AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37069") AnnotationAssertion( "MA:0001913") AnnotationAssertion( "NCIT:C52848") AnnotationAssertion(Annotation( "ncithesaurus:Alveolar_Artery") "UMLS:C1706783") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009654") AnnotationAssertion(rdfs:label "alveolar artery") SubClassOf(Annotation( "MA"^^xsd:string) ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (auricular artery) AnnotationAssertion(Annotation( "ncithesaurus:Auricular_Artery") "An artery that supplies oxygenated blood to the ear.") AnnotationAssertion( "add child terms") AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37072") AnnotationAssertion( "MA:0001918") AnnotationAssertion( "NCIT:C52849") AnnotationAssertion(Annotation( "ncithesaurus:Auricular_Artery") "UMLS:C1706858") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009655") AnnotationAssertion(rdfs:label "auricular artery") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete frontal artery) AnnotationAssertion( "MA:0001960") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009656") AnnotationAssertion(rdfs:comment "insufficiently defined") AnnotationAssertion(rdfs:label "obsolete frontal artery") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (artery of lip) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37092") AnnotationAssertion( "MA:0001987") AnnotationAssertion( "NCIT:C52947") AnnotationAssertion(Annotation( "ncithesaurus:Labial_Artery") "UMLS:C1708633") AnnotationAssertion(Annotation( "MA:0001987") "labial artery") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009657") AnnotationAssertion(rdfs:label "artery of lip") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pancreaticoduodenal artery) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:36529") AnnotationAssertion( "MA:0002013") AnnotationAssertion( "NCIT:C52992") AnnotationAssertion(Annotation( "ncithesaurus:Pancreatico-Duodenal_Artery") "UMLS:C1709455") AnnotationAssertion(Annotation( ) "arteriae pancreaticoduodenales") AnnotationAssertion(Annotation( "MA:0002013") "pancreatico-duodenal artery") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009658") AnnotationAssertion(rdfs:label "pancreaticoduodenal artery") SubClassOf(Annotation( "MA"^^xsd:string) ) # Class: (spermatic artery) AnnotationAssertion(Annotation( "ncithesaurus:Spermatic_Artery") "A branch of the abdominal aorta that supplies oxygenated blood to the testis.") AnnotationAssertion( "add child terms; consider merging with testicular artery") AnnotationAssertion( ) AnnotationAssertion( "MA:0002040") AnnotationAssertion( "NCIT:C33581") AnnotationAssertion(Annotation( "ncithesaurus:Spermatic_Artery") "UMLS:C0226409") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009659") AnnotationAssertion(rdfs:label "spermatic artery") SubClassOf( ) # Class: (obsolete adrenal vein) AnnotationAssertion( "UBERON:0001146") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009660") AnnotationAssertion(rdfs:label "obsolete adrenal vein") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (midbrain nucleus) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Nucleus located in the midbrain.") AnnotationAssertion( ) AnnotationAssertion( "TAO:0002209") AnnotationAssertion( "ZFA:0001665") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009661") AnnotationAssertion(rdfs:label "midbrain nucleus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (hindbrain nucleus) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Nucleus located within the hindbrain.") AnnotationAssertion( "TAO:0002177") AnnotationAssertion( "ZFA:0001658") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009662") AnnotationAssertion(rdfs:label "hindbrain nucleus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (telencephalic nucleus) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A nucleus of brain that is part of a telencephalon.") AnnotationAssertion( "TAO:0002178") AnnotationAssertion( "ZFA:0001660") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009663") AnnotationAssertion(rdfs:label "telencephalic nucleus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (gut mesentery) AnnotationAssertion( "EHDAA2:0004566") AnnotationAssertion( "EMAPA:32911") AnnotationAssertion( "MA:0003203") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "peritoneal cavity mesentary") AnnotationAssertion(Annotation( ) "peritoneal mesentary") AnnotationAssertion( "UBERON:0009664") AnnotationAssertion(rdfs:label "gut mesentery") AnnotationAssertion(rdfs:seeAlso "https://github.com/obophenotype/uberon/issues/509"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (ventral mesentery) AnnotationAssertion(Annotation( ) "Ventral mesentery is the part of the peritoneum closest to the navel.") AnnotationAssertion( "degenerates during development except foregut portion") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0004569") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009668") AnnotationAssertion(rdfs:label "ventral mesentery") SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (embryonic cloacal lumen) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An anatomical space that surrounded_by a embryonic cloaca.") AnnotationAssertion( "EHDAA2:0004586") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009669") AnnotationAssertion(rdfs:label "embryonic cloacal lumen") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (rectal lumen) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An anatomical space that surrounded_by a rectum.") AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0004587") AnnotationAssertion( "EMAPA:18388") AnnotationAssertion( "FMA:14598") AnnotationAssertion(Annotation( "FMA:14598") "lumen of rectum") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009670") AnnotationAssertion(rdfs:label "rectal lumen") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "cjm"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (nasal fin) AnnotationAssertion(Annotation( ) "The nasal fin is an epithelial seam that develops by fusion between the epithelial linings of the medial and lateral nasal swellings. Shortly after its formation the nasal fin regresses and is replaced by mesenchyme, with exception of its most posterior portion which remains as the bucconasal membrane.") AnnotationAssertion( "EHDAA2:0004548") AnnotationAssertion( "FMA:295940") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009671") AnnotationAssertion(rdfs:label "nasal fin") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (oronasal membrane) AnnotationAssertion(Annotation( ) "The oronasal membrane separates the oral cavity and nasal cavity.") AnnotationAssertion( "split into two?") AnnotationAssertion( "In humans, the oronasal membrane ruptures during the seventh week, producing a single, large oronasal cavity") AnnotationAssertion( "EHDAA2:0000188") AnnotationAssertion( "EHDAA:7840") AnnotationAssertion( "EHDAA:7984") AnnotationAssertion( "FMA:295942") AnnotationAssertion(Annotation( "EHDAA:7840") "bucconasal membrane") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009672") AnnotationAssertion(rdfs:label "oronasal membrane") SubClassOf(Annotation( "EHDAA2"^^xsd:string) ) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "posterior portion") Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (accessory XI nerve cranial component) AnnotationAssertion( "May be obsoleted in future. WP states: Traditional descriptions of the accessory nerve divide it into two parts: a spinal part and a cranial part.[1] But because the cranial component rapidly joins the vagus nerve and serves the same function as other vagal nerve fibers, modern descriptions often consider the cranial component part of the vagus nerve and not part of the accessory nerve proper.") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001174") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( ) "Cranial nerves XI and XII evolved in the common ancestor to amniotes (non-amphibian tetrapods) thus totalling twelve pairs.[well established][VHOG]") AnnotationAssertion( "EHDAA2:0000107") AnnotationAssertion( "EHDAA:5574") AnnotationAssertion( "EMAPA:17266") AnnotationAssertion( "MA:0001089") AnnotationAssertion( "VHOG:0001174") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009673") AnnotationAssertion(rdfs:comment "Thus in contemporary discussions of the accessory nerve, the common practice is to dismiss the cranial part altogether, referring to the accessory nerve specifically as the spinal accessory nerve.") AnnotationAssertion(rdfs:label "accessory XI nerve cranial component") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "MA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (accessory XI nerve spinal component) AnnotationAssertion(Annotation( ) "The spinal root of accessory nerve (or part) is firm in texture, and its fibers arise from the motor cells in the lateral part of the anterior column of the gray substance of the medulla spinalis as low as the fifth cervical nerve. Passing through the lateral funiculus of the medulla spinalis, they emerge on its surface and unite to form a single trunk, which ascends between the ligamentum denticulatum and the posterior roots of the spinal nerves; enters the skull through the foramen magnum, and is then directed to the jugular foramen, through which it passes, lying in the same sheath of dura mater as the vagus, but separated from it by a fold of the arachnoid. In the jugular foramen, it receives one or two filaments from the cranial part of the nerve, or else joins it for a short distance and then separates from it again. As its exit from the jugular foramen, it runs backward in front of the internal jugular vein in 66.6 per cent. of cases, and behind in it 33.3 per cent. The nerve then descends obliquely behind the Digastricus and Stylohyoideus to the upper part of the Sternocleidomastoideus; it pierces this muscle, and courses obliquely across the posterior triangle of the neck, to end in the deep surface of the Trapezius. As it traverses the Sternocleidomastoideus it gives several filaments to the muscle, and joins with branches from the second cervical nerve. In the posterior triangle it unites with the second and third cervical nerves, while beneath the Trapezius it forms a plexus with the third and fourth cervical nerves, and from this plexus fibers are distributed to the muscle.") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001115") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( ) "Cranial nerves XI and XII evolved in the common ancestor to amniotes (non-amphibian tetrapods) thus totalling twelve pairs.[well established][VHOG]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0000108") AnnotationAssertion( "EHDAA:5576") AnnotationAssertion( "EMAPA:17267") AnnotationAssertion( "MA:0001090") AnnotationAssertion( "VHOG:0001115") AnnotationAssertion(Annotation( "NeuroNames:1709") "spinal part of the accessory nerve") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009674") AnnotationAssertion(rdfs:label "accessory XI nerve spinal component") SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (chorda tympani branch of facial nerve) AnnotationAssertion(Annotation( ) "The chorda tympani is a nerve that branches from the facial nerve (cranial nerve VII) inside the facial canal, just before the facial nerve exits the skull via the stylomastoid foramen. Chorda tympani is a branch of the facial nerve (the seventh cranial nerve) that serves the taste buds in the front of the tongue, runs through the middle ear, and carries taste messages to the brain. The chorda tympani is part of one of three cranial nerves that are involved in taste. The taste system involves a complicated feedback loop, with each nerve acting to inhibit the signals of other nerves. The chorda tympani appears to exert a particularly strong inhibitory influence on other taste nerves, as well as on pain fibers in the tongue. When the chorda tympani is damaged, its inhibitory function is disrupted, leading to less inhibited activity in the other nerves.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0000490") AnnotationAssertion( "EHDAA:3719") AnnotationAssertion( "EMAPA:18217") AnnotationAssertion( "FMA:53228") AnnotationAssertion( "MA:0001092") AnnotationAssertion( "VHOG:0001343") AnnotationAssertion(Annotation( "FMA:53228") "chorda tympani") AnnotationAssertion(Annotation( "MA:0001092") "facial VII nerve chorda tympani branch") AnnotationAssertion(Annotation( "FMA:53228") "parasympathetic root of submandibular ganglion") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) "radix parasympathica ganglii submandibularis") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "chorda tympani nerve") AnnotationAssertion(Annotation( ) "corda tympani nerve") AnnotationAssertion(Annotation( ) "nervus corda tympani") AnnotationAssertion(Annotation( ) "tympanic cord") AnnotationAssertion( "UBERON:0009675") AnnotationAssertion(rdfs:label "chorda tympani branch of facial nerve") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (early telencephalic vesicle) AnnotationAssertion( "EFO:0003562") AnnotationAssertion( "EHDAA2:0001981") AnnotationAssertion( "EHDAA:1993") AnnotationAssertion( "EHDAA:2671") AnnotationAssertion( "EMAPA:16914") AnnotationAssertion(Annotation( "EHDAA2:0001981") "early telencephalic vesicle") AnnotationAssertion( "uberon") AnnotationAssertion( "early telencephalic ventricle") AnnotationAssertion( "UBERON:0009676") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "early telencephalic vesicle") SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (tooth row) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Anatomical cluster consisting of adjacent teeth constituting a row.") AnnotationAssertion( "FMA:59415") AnnotationAssertion( "TAO:0001667") AnnotationAssertion( "ZFA:0001642") AnnotationAssertion(Annotation( "FMA:59415") "dental arcade") AnnotationAssertion(Annotation( ) "row of teeth") AnnotationAssertion(Annotation( "ZFA:0001642") Annotation( ) "tooth rows") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009678") AnnotationAssertion(rdfs:label "tooth row") SubClassOf( ) SubClassOf( ) # Class: (set of lower jaw teeth) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A tooth row that is part of a skeleton of lower jaw.") AnnotationAssertion( "EHDAA2:0001029") AnnotationAssertion( "FMA:55635") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) Annotation( ) "arcus dentalis inferior") AnnotationAssertion(Annotation( "FMA:55635") "lower dental arcade") AnnotationAssertion(Annotation( "EHDAA2:0001029") "lower jaw teeth") AnnotationAssertion(Annotation( "FMA:55635") "set of all lower teeth") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:55635") "mandibular dental arcade") AnnotationAssertion( "UBERON:0009679") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "set of lower jaw teeth") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (set of upper jaw teeth) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A tooth row that is part of a skeleton of upper jaw.") AnnotationAssertion( "EHDAA2:0002129") AnnotationAssertion( "FMA:55634") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) Annotation( ) "arcus dentalis superior") AnnotationAssertion(Annotation( "FMA:55634") "set of all upper teeth") AnnotationAssertion(Annotation( "FMA:55634") "upper dental arcade") AnnotationAssertion(Annotation( "EHDAA2:0002129") "upper jaw teeth") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:55634") "maxillary dental arcade") AnnotationAssertion( "UBERON:0009680") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "set of upper jaw teeth") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (middle cardiac vein) AnnotationAssertion(Annotation( ) "The middle cardiac vein commences at the apex of the heart, ascends in the posterior longitudinal sulcus, and ends in the coronary sinus near its right extremity.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0004509") AnnotationAssertion( "FMA:4713") AnnotationAssertion( "NCIT:C12880") AnnotationAssertion(Annotation( "ncithesaurus:Middle_Cardiac_Vein") "UMLS:C0226660") AnnotationAssertion(Annotation( "FMA:4713") "lesser cardiac vein") AnnotationAssertion(Annotation( "FMA:4713") "posterior interventricular vein") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "vena cardiaca media") AnnotationAssertion( "UBERON:0009687") AnnotationAssertion(rdfs:label "middle cardiac vein") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (posterior inferior cerebellar artery) AnnotationAssertion(Annotation( ) "The posterior inferior cerebellar artery (PICA), the largest branch of the vertebral, is one of the three main arterial blood supplies for the cerebellum.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0000660") AnnotationAssertion( "FMA:50518") AnnotationAssertion( "NCIT:C33362") AnnotationAssertion(Annotation( "ncithesaurus:Posterior_Inferior_Cerebellar_Artery") "UMLS:C0149573") AnnotationAssertion(Annotation( "EHDAA2:0000660") "posterior inferior cerebellar artery") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009688") AnnotationAssertion(rdfs:label "posterior inferior cerebellar artery") SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) DisjointClasses(Annotation( "lexical"^^xsd:string) ) # Class: (anterior inferior cerebellar artery) AnnotationAssertion(Annotation( "ncithesaurus:Anterior_Inferior_Cerebellar_Artery") "A basilar artery branch that supplies the anterior portion of the inferior surface of the cerebellum.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0000587") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37070") AnnotationAssertion( "FMA:50544") AnnotationAssertion( "NCIT:C32091") AnnotationAssertion(Annotation( "ncithesaurus:Anterior_Inferior_Cerebellar_Artery") "UMLS:C0226245") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009689") AnnotationAssertion(rdfs:label "anterior inferior cerebellar artery") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (lumen of pharyngotympanic tube) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An organ cavity that is part of a pharyngotympanic tube.") AnnotationAssertion( "Check relationships for conformance with AAO and XAO") AnnotationAssertion( "EHDAA2:0004118") AnnotationAssertion( "FMA:60079") AnnotationAssertion(Annotation( "EHDAA2:0004118") "auditory tube lumen") AnnotationAssertion(Annotation( "FMA:60079") "lumen of auditory tube") AnnotationAssertion(Annotation( "FMA:60079") "lumen of eustachian tube") AnnotationAssertion(Annotation( "FMA:60079") "pharyngotympanic tube lumen") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009692") AnnotationAssertion(rdfs:label "lumen of pharyngotympanic tube") SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "cjm"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2/Kardong") ObjectSomeValuesFrom( )) # Class: (epithelium of laryngopharynx) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An epithelium that is part of a hypopharynx.") AnnotationAssertion( "EHDAA2:0004575") AnnotationAssertion( "FMA:62454") AnnotationAssertion(Annotation( "FMA:62454") "epithelium of laryngeal pharynx") AnnotationAssertion(Annotation( "FMA:62454") "laryngopharynx epithelium") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009695") AnnotationAssertion(rdfs:label "epithelium of laryngopharynx") SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (epithelium of appendix) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An epithelium that is part of a vermiform appendix.") AnnotationAssertion( "CALOHA:TS-2062") AnnotationAssertion( "EHDAA2:0004561") AnnotationAssertion( "FMA:63581") AnnotationAssertion(Annotation( "FMA:63581") "appendix epithelium") AnnotationAssertion(Annotation( "FMA:63581") "epithelium of vermiform appendix") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009697") AnnotationAssertion(rdfs:label "epithelium of appendix") SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (dorsal pancreas) AnnotationAssertion( "EHDAA2:0001371") AnnotationAssertion( "uberon") AnnotationAssertion( "pancreatis dorsalis") AnnotationAssertion( "UBERON:0009708") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "dorsal pancreas") SubClassOf(Annotation( "EHDAA2"^^xsd:string) ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "cjm"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (ventral pancreas) AnnotationAssertion( "EHDAA2:0001393") AnnotationAssertion( "uberon") AnnotationAssertion( "pancreatis ventralis") AnnotationAssertion( "UBERON:0009709") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "ventral pancreas") SubClassOf(Annotation( "EHDAA2"^^xsd:string) ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "cjm"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (endocardium of right ventricle) AnnotationAssertion(Annotation( ) "Any endocardium that is part of the right ventricle of the heart.") AnnotationAssertion(Annotation( "FMA:9536") "Endocardium of ventricle which is continuous tricuspid valve, pulmonary valve and with the tunica intima of the pulmonary trunk.") AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0002188") AnnotationAssertion( "EMAPA:17341") AnnotationAssertion( "FMA:9536") AnnotationAssertion( "NCIT:C102343") AnnotationAssertion( "VHOG:0001235") AnnotationAssertion(Annotation( "VHOG:0001235") "right ventricle endocardium") AnnotationAssertion(Annotation( "FMA:9536") "right ventricular endocardium") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "EMAPA:17341") "endocardial lining of right ventricle") AnnotationAssertion(Annotation( "VHOG:0001235") "right ventricle endocardial tissue") AnnotationAssertion( "UBERON:0009712") AnnotationAssertion(rdfs:label "endocardium of right ventricle") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (endocardium of left ventricle) AnnotationAssertion(Annotation( ) "Any endocardium that is part of the left ventricle of the heart.") AnnotationAssertion(Annotation( "FMA:9559") "Endocardium of ventricle which is continuous with mitral valve, aortic valve, atrioventricular septum and the tunica intima of the aorta.") AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0002182") AnnotationAssertion( "EMAPA:17338") AnnotationAssertion( "FMA:9559") AnnotationAssertion( "VHOG:0001233") AnnotationAssertion(Annotation( "VHOG:0001233") "left ventricle endocardium") AnnotationAssertion(Annotation( "FMA:9559") "left ventricular endocardium") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "EMAPA:17338") "endocardial lining of left ventricle") AnnotationAssertion(Annotation( "VHOG:0001233") "left ventricle endocardial tissue") AnnotationAssertion( "UBERON:0009713") AnnotationAssertion(rdfs:label "endocardium of left ventricle") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (intermaxillary process) AnnotationAssertion(Annotation( ) "The primordial mass of tissue formed by the merging of the medial nasal prominences of the embryo; it contributes to the intermaxillary portion of the upper jaw, the prolabial portion of the upper lip, and the primary palate.") AnnotationAssertion( "requires verification. Note EHDAA2 has this as coming from both lateral and medial prominences. See also: median cleft lip") AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0000868") AnnotationAssertion( "EHDAA:7856") AnnotationAssertion( "FMA:295872") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "globular process") AnnotationAssertion(Annotation( ) Annotation( ) "globular processes of his") AnnotationAssertion(Annotation( ) "intermaxillary segment") AnnotationAssertion( "UBERON:0009714") AnnotationAssertion(rdfs:label "intermaxillary process") SubClassOf(Annotation( "EHDAA2-modified") ) SubClassOf(Annotation( "inconsistent") Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (stomodeal lumen) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An anatomical cavity that surrounded_by a stomodeum.") AnnotationAssertion( "lumen of stomatodaeum") AnnotationAssertion( "lumen of stomodeum") AnnotationAssertion( "stomatodeal cavity") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009715") AnnotationAssertion(rdfs:label "stomodeal lumen") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (entire pharyngeal arch endoderm) AnnotationAssertion( "EHDAA2:0004621") AnnotationAssertion( "EMAPA:32754") AnnotationAssertion( "FMA:293087") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "EHDAA2:0004621") "pharyngeal arch endoderm") AnnotationAssertion( "UBERON:0009722") AnnotationAssertion(rdfs:label "entire pharyngeal arch endoderm") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (sublaminar layers S3 or S4) AnnotationAssertion(Annotation( ) Annotation( "GOC:plr") "One of sublaminar layers S3 or S4.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "CP:0001040") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009731") AnnotationAssertion(rdfs:label "sublaminar layers S3 or S4") SubClassOf( ) # Class: (sublaminar layers S1 or S2 or S5) AnnotationAssertion(Annotation( ) Annotation( "GOC:plr") "One of sublaminar layers S1, S2, or S5.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "CP:0001041") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009732") AnnotationAssertion(rdfs:label "sublaminar layers S1 or S2 or S5") SubClassOf( ) # Class: (sublaminar layers S1 or S2 or S3) AnnotationAssertion(Annotation( ) Annotation( "GOC:plr") "One of sublaminar layers S1, S2, or S3.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "CP:0001042") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009733") AnnotationAssertion(rdfs:label "sublaminar layers S1 or S2 or S3") SubClassOf( ) # Class: (sublaminar layers S2 or S3 or S4) AnnotationAssertion(Annotation( ) Annotation( "GOC:plr") "One of sublaminar layers S2, S3, or S4.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "CP:0001043") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009734") AnnotationAssertion(rdfs:label "sublaminar layers S2 or S3 or S4") SubClassOf( ) # Class: (sublaminar layers S1 or S3 or S4) AnnotationAssertion(Annotation( ) Annotation( "GOC:plr") "One of sublaminar layers S1, S3, or S4.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "CP:0001044") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009735") AnnotationAssertion(rdfs:label "sublaminar layers S1 or S3 or S4") SubClassOf( ) # Class: (sublaminar layers S3 or S4 or S5) AnnotationAssertion(Annotation( ) Annotation( "GOC:plr") "One of sublaminar layers S3, S4, or S5.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "CP:0001045") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009736") AnnotationAssertion(rdfs:label "sublaminar layers S3 or S4 or S5") SubClassOf( ) # Class: (sublaminar layers S1 or S2 or S3 or S4) AnnotationAssertion(Annotation( ) Annotation( "GOC:plr") "One of sublaminar layers S1, S2, S3, or S4.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "CP:0001046") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009737") AnnotationAssertion(rdfs:label "sublaminar layers S1 or S2 or S3 or S4") SubClassOf( ) # Class: (border of sublaminar layers S1 and S2) AnnotationAssertion(Annotation( ) Annotation( ) Annotation( "GOC:plr") "The region extending out from the boundary between layers S1 and S2.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "CP:0001038") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009738") AnnotationAssertion(rdfs:label "border of sublaminar layers S1 and S2") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) # Class: (border of sublaminar layers S3 and S4) AnnotationAssertion(Annotation( ) Annotation( ) Annotation( "GOC:plr") "The region extending out from the boundary between sublaminar layers S3 and S4.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "CP:0001039") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009739") AnnotationAssertion(rdfs:label "border of sublaminar layers S3 and S4") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) # Class: (border between sublaminar layers) AnnotationAssertion(Annotation( ) "A region of the retina corresponding to a portion of two adjacent substratum layers.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009740") AnnotationAssertion(rdfs:label "border between sublaminar layers") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) # Class: (obsolete tailbud stage) AnnotationAssertion( "XAO:1000007") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009741") AnnotationAssertion(rdfs:comment "Was made obsolete as it was xenopus specific") AnnotationAssertion(rdfs:label "obsolete tailbud stage") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (proamniotic cavity) AnnotationAssertion(Annotation( "MP:0011197") "The cavity of the developing embryo that is formed within the epiblast tissue prior to the closing of the proamniotic canal by the amniotic folds.") AnnotationAssertion( "EMAPA:36038") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009742") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "proamniotic cavity") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (visceral yolk sac cavity) AnnotationAssertion(Annotation( "MP:0011201") "The closed space containing the yolk, formed by the fusion of the edges of the embryonic epiblast (hypoblast) and later surrounded by the visceral yolk sac (hypoblast and visceral yolk sac mesoderm).") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009743") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "visceral yolk sac cavity") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lymph node medullary sinus) AnnotationAssertion(Annotation( "MP:0011222") "The channels in the lymph node medulla that separate the medullary cords and are crossed by a reticulum of cells and fibers and bounded by littoral cells; lymph flows through the medullary sinus from the cortical sinuses and into the efferent lymphatic vessels.") AnnotationAssertion( "medullary sinus") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37898") AnnotationAssertion( "FMA:312359") AnnotationAssertion( "uberon") AnnotationAssertion( "lymph node medullary sinusoid") AnnotationAssertion( "UBERON:0009744") AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "Lymph flows into the medullary sinuses from cortical sinuses, and into efferent lymphatic vessels. Medullary sinuses contain histiocytes (immobile macrophages) and reticular cells.[WP]") AnnotationAssertion(rdfs:label "lymph node medullary sinus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lymph node medullary cord) AnnotationAssertion(Annotation( "MP:0011224") "The dense rope-like structures of lymphatic tissue located between the medullary sinuses in the medulla of a lymph node.") AnnotationAssertion( "medullary cord") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37897") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009745") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "lymph node medullary cord") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (head fold of embryonic disc) AnnotationAssertion(Annotation( "MP:0011257") "The crescent-shaped, ventrally located fold of the embryonic disc at the future cephalic end of the developing embryo.") AnnotationAssertion( ) AnnotationAssertion( "FMA:295585") AnnotationAssertion( "head fold") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009746") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "head fold of embryonic disc") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (tail fold of embryonic disc) AnnotationAssertion(Annotation( "MP:0011258") "The crescent-shaped, ventrally located fold of the embryonic disc at the future caudal end of the developing embryo.") AnnotationAssertion( ) AnnotationAssertion( "FMA:295589") AnnotationAssertion( "tail fold") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009747") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "tail fold of embryonic disc") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (cephalic neural fold) AnnotationAssertion(Annotation( "MP:0011259") "The elevated margins of the neural groove that are located in the future cephalic region of the embryo.") AnnotationAssertion( "EMAPA:16090") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009748") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "cephalic neural fold") SubClassOf( ) # Class: (limb mesenchyme) AnnotationAssertion(Annotation( "MP:0011261") "The primordial embryonic connective tissue of the developing limbs, autopods and digits, consisting of mesenchymal cells supported in interlaminar jelly, that derive mostly from the mesoderm and contribute to limb connective tissue, bone and musculature in conjunction with myotome cells.") AnnotationAssertion(Annotation( "EMAPA"^^xsd:string) "EMAPA mapping from TH") AnnotationAssertion( "EMAPA:32705") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "Geisha:syn") Annotation( "NCBITaxon:8782"^^xsd:string) "limb mesoderm") AnnotationAssertion( "UBERON:0009749") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "limb mesenchyme") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (cardiac mesenchyme) AnnotationAssertion(Annotation( "MP:0011264") "The embryonic connective tissue made up of loosely aggregated mesenchymal cells, supported by interlaminar jelly, that gives rise to the developing cardiac structures.") AnnotationAssertion( "decide whether to merge with cardiac mesoderm. In EHDAA2 this lasts CS12->unbounded, includes mesenchyme of individual components as parts") AnnotationAssertion( "EHDAA2:0004162") AnnotationAssertion( "EMAPA:36438") AnnotationAssertion(Annotation( "EMAPA:36438") "heart mesenchyme") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009751") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "cardiac mesenchyme") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pancreas mesenchyme) AnnotationAssertion(Annotation( "MP:0011265") "The embryonic connective tissue made up of loosely aggregated mesenchymal cells, supported by interlaminar jelly, that gives rise to the developing pancreas.") AnnotationAssertion( "EFO:0002557") AnnotationAssertion( "EMAPA:26220") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009752") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "pancreas mesenchyme") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (adrenal gland cortex zone) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:35113") AnnotationAssertion( "FMA:69086") AnnotationAssertion( "MA:0001887") AnnotationAssertion(Annotation( "FMA:69086") "adrenal cortical region") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:69086") "region of adrenal cortex") AnnotationAssertion( "UBERON:0009753") AnnotationAssertion(rdfs:label "adrenal gland cortex zone") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "MA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (blubber) AnnotationAssertion(Annotation( ) "A thick layer of vascularized adipose tissue found under the skin of all cetaceans, pinnipeds and sirenians.") AnnotationAssertion( "Lipid-rich, collagen fiber-laced blubber comprises the hypodermis and covers the whole body, except for parts of the appendages, strongly attached to the musculature and skeleton by highly organized, fan-shaped networks of tendons and ligaments. It can comprise up to 50% of the body mass of some marine mammals during some points in their lives, and can range from two inches (5 cm) thick in dolphins and smaller whales, to more than 12 inches (30 cm)thick in some bigger whales, such as right and bowhead whales") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009754") AnnotationAssertion(rdfs:label "blubber") SubClassOf(Annotation( "Wikipedia"^^xsd:string) ) # Class: (abdominal ganglion) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A ganglion that is part of a abdominal segment of trunk.") AnnotationAssertion( ) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009758") AnnotationAssertion(rdfs:label "abdominal ganglion") SubClassOf( ) SubClassOf( ) # Class: (proximal interphalangeal joint) AnnotationAssertion(Annotation( ) "An inter-phalangeal joint that connects a proximal phalanx to either a medial or distal phalanx.") AnnotationAssertion( "FMA:65022") AnnotationAssertion( "NCIT:C101528") AnnotationAssertion(Annotation( ) "PIJ joint") AnnotationAssertion(Annotation( ) "PIP joint") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009767") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "proximal interphalangeal joint") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (distal interphalangeal joint) AnnotationAssertion(Annotation( ) "An inter-phalangeal joint that connects a distal phalanx to either a medial or proximal phalanx.") AnnotationAssertion( "FMA:65024") AnnotationAssertion( "NCIT:C101529") AnnotationAssertion(Annotation( ) "DIJ joint") AnnotationAssertion(Annotation( ) "DIP joint") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009768") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "distal interphalangeal joint") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (left common cardinal vein) AnnotationAssertion( "the left duct atrophies at metamorphosis in the lamprey (22)[PMID:20959416, S1]") AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0000304") AnnotationAssertion( "FMA:70311") AnnotationAssertion(Annotation( "EHDAA2:0000304") "common cardinal vein left") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009769") AnnotationAssertion(rdfs:label "left common cardinal vein") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (left anterior cardinal vein) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An anterior cardinal vein that is in_the_left_side_of a multicellular organism.") AnnotationAssertion( "https://github.com/obophenotype/uberon/wiki/Modeling-paired-structures-Design-Pattern"^^xsd:anyURI) AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0000127") AnnotationAssertion( "FMA:70313") AnnotationAssertion(Annotation( "FMA:70313") "left precardinal vein") AnnotationAssertion(Annotation( "EHDAA2:0000127") "precardinal vein left") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009771") AnnotationAssertion(rdfs:label "left anterior cardinal vein") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (right anterior cardinal vein) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An anterior cardinal vein that is in_the_right_side_of a multicellular organism.") AnnotationAssertion( "https://github.com/obophenotype/uberon/wiki/Modeling-paired-structures-Design-Pattern"^^xsd:anyURI) AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0004537") AnnotationAssertion( "FMA:70312") AnnotationAssertion(Annotation( "EHDAA2:0004537") "precardinal vein right") AnnotationAssertion(Annotation( "FMA:70312") "right precardinal vein") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009772") AnnotationAssertion(rdfs:label "right anterior cardinal vein") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (renal tubule) AnnotationAssertion(Annotation( ) Annotation( "GO:0061333") Annotation( "GOC:dph") Annotation( "GOC:mtg_kidney_jan10") "A renal tubule is a tube that filters, re-absorbs and secretes substances to rid an organism of waste and to play a role in fluid homeostasis.") AnnotationAssertion( "this class groups vertebrate nephron tubules with analagous structures such as insect Malpighian tubules") AnnotationAssertion(Annotation( ) "renal tubule (generic)") AnnotationAssertion(Annotation( ) Annotation( "OBOL:automatic"^^xsd:string) "tubule of excretory system") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009773") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "renal tubule") SubClassOf( ) SubClassOf( ) # Class: (obsolete embryonic midbrain hindbrain boundary) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009774") AnnotationAssertion(rdfs:label "obsolete embryonic midbrain hindbrain boundary") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (lateral medullary reticular complex) AnnotationAssertion(Annotation( ) "A nuclear complex of the medullary reticular formation that can be divided into three subnuclei: the parvocellular, magnocellular and the subtrigeminal[WP,modified].") AnnotationAssertion( ) AnnotationAssertion( "BAMS:LMRt") AnnotationAssertion( "FMA:72573") AnnotationAssertion( "HBA:9613") AnnotationAssertion(Annotation( "FMA:72573") "lateral group of medullary reticular formation") AnnotationAssertion(Annotation( "FMA:72573") "lateral medullary reticular group") AnnotationAssertion(Annotation( "FMA:72573") "lateral reticular formation of the medulla oblongata") AnnotationAssertion(Annotation( "FMA:72573") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "nuclei laterales myelencephali") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009775") AnnotationAssertion(rdfs:comment "The lateral reticular nucleus, of the funiculus, can be divided into three subnuclei, the parvocellular, magnocellular and the subtrigeminal. As is typical of the reticular formation, none of these are very distinct subnuclei, but rather blurred distinctions between cell types and location. The lateral reticular nucleus sends all of its projections to the cerebellum. The parvocellular portion of the LRN and the immediately adjacent magnocellular portion send most their projections to the vermis of the cerebellum. The rest of the magnocellular subnucleus sends its projections to the hemisphere regions of the cerebellum. The subtrigeminal nucleus sends its projections to the flocculonodular lobe. All of these efferent pathways are projected in an ipsilateral manner to the cerebellum, the most abundant of which are those to the vermis. This nucleus is also involved in the mediation of inspiration (in-breathing) with a part of the ventral r. nucleus. The afferent pathways to the LRN come from the spinal cord and higher brain structures. Most of the afferents come from the ipsilateral dorsal horn of the spinal cord and project exclusively to the parts of the LRN that do not receive input from the cortex. The spinal cord projections terminate mostly in the parvocellular region along with the adjacent magnocellular cells. This implies that most input from the spinal cord is relayed into the vermis[WP]") AnnotationAssertion(rdfs:label "lateral medullary reticular complex") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (intermediate reticular formation) AnnotationAssertion( "TAO:0000219") AnnotationAssertion( "ZFA:0000219") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "ZFA:0000219") Annotation( ) "intermediate reticular formations") AnnotationAssertion( "UBERON:0009776") AnnotationAssertion(rdfs:label "intermediate reticular formation") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "GOC:pr") Annotation( "brainspan.org") ObjectSomeValuesFrom( )) # Class: (intermediate reticular nucleus) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A nucleus of brain that is part of a intermediate reticular formation.") AnnotationAssertion( ) AnnotationAssertion( "BAMS:IRN") AnnotationAssertion( "BAMS:IRt") AnnotationAssertion( "DHBA:12620") AnnotationAssertion( "FMA:84336") AnnotationAssertion( "MBA:136") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009777") AnnotationAssertion(rdfs:label "intermediate reticular nucleus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pleural sac) AnnotationAssertion(Annotation( ) "A serous sac that has the pleura and the pleural cavity as parts.") AnnotationAssertion(Annotation( "EHDAA2"^^xsd:string) "despite its name the class EHDAA2:0004737 is not a true cavity, it corresponds to what we call the sac") AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0004737") AnnotationAssertion( "FMA:9690") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009778") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "pleural sac") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA-abduced-lr"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (cardiac muscle tissue of right auricle) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A cardiac muscle tissue that is part of a right atrium auricular region.") AnnotationAssertion( "EHDAA2:0004169") AnnotationAssertion( "EMAPA:16826") AnnotationAssertion( "EMAPA:17324") AnnotationAssertion( "FMA:84280") AnnotationAssertion( "VHOG:0000611") AnnotationAssertion(Annotation( "EMAPA:16826") "cardiac muscle of right auricular region") AnnotationAssertion(Annotation( "EHDAA2:0004169") "right atrium auricular region heart muscle") AnnotationAssertion(Annotation( "VHOG:0000611") "right auricular region myocardium") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "VHOG:0000611") "right auricular region cardiac muscle") AnnotationAssertion( "UBERON:0009779") AnnotationAssertion(rdfs:label "cardiac muscle tissue of right auricle") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (cardiac muscle tissue of left auricle) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A cardiac muscle tissue that is part of a left atrium auricular region.") AnnotationAssertion( "EHDAA2:0004168") AnnotationAssertion( "EMAPA:16818") AnnotationAssertion( "EMAPA:17318") AnnotationAssertion( "FMA:84281") AnnotationAssertion(Annotation( "EMAPA:16818") "cardiac muscle of left auricular region") AnnotationAssertion(Annotation( "EHDAA2:0004168") "left atrium auricular region heart muscle") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009780") AnnotationAssertion(rdfs:label "cardiac muscle tissue of left auricle") AnnotationAssertion(rdfs:seeAlso "https://github.com/obophenotype/uberon/issues/321"^^xsd:anyURI) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (dorsolateral prefrontal cortex) AnnotationAssertion(Annotation( ) "The dorsolateral prefrontal cortex (DL-PFC or DLPFC), according to a more restricted definition, is roughly equivalent to Brodmann areas 9 and 46.[1] According to a broader definition DL-PFC consists of the lateral portions of Brodmann areas 9 - 12, of areas 45, 46, and the superior part of area 47.[2] These regions mainly receive their blood supply from the middle cerebral artery. With respect to neurotransmitter systems, there is evidence that dopamine plays a particularly important role in DL-PFC.[2]DL-PFC is connected to the orbitofrontal cortex, and to a variety of brain areas, which include the thalamus, parts of the basal ganglia (the dorsal caudate nucleus), the hippocampus, and primary and secondary association areas of neocortex, including posterior temporal, parietal, and occipital areas.") AnnotationAssertion( "check dorsolateral prefrontal neocortex") AnnotationAssertion( ) AnnotationAssertion( "DHBA:10173") AnnotationAssertion( "FMA:276189") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009834") AnnotationAssertion(rdfs:label "dorsolateral prefrontal cortex") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) # Class: (anterior cingulate cortex) AnnotationAssertion(Annotation( "BIRNLEX:936") "The frontal part of the cingulate cortex that resembles a collar form around the corpus callosum. It includes both the ventral and dorsal areas of the cingulate cortex. Wikipedia:File:Gray727.svg.") AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:936") AnnotationAssertion( "BTO:0004249") AnnotationAssertion( "FMA:271599") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0004249") Annotation( ) "ACC") AnnotationAssertion( "UBERON:0009835") AnnotationAssertion(rdfs:label "anterior cingulate cortex") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/2/22/Gray727_anterior_cingulate_cortex.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "BTO"^^xsd:string) ObjectSomeValuesFrom( )) DisjointClasses(Annotation( "lexical"^^xsd:string) ) # Class: (fronto-orbital gyrus) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:FOG") AnnotationAssertion( "BAMS:OFG") AnnotationAssertion( "BIRNLEX:1243") AnnotationAssertion(Annotation( "BIRNLEX:1243") "UMLS:C0262239") AnnotationAssertion(Annotation( "BIRNLEX:1243") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=90") AnnotationAssertion(Annotation( "BIRNLEX:1243") "fronto-orbital gyrus") AnnotationAssertion( "orbito-frontal gyrus") AnnotationAssertion( "orbitofrontal gyrus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:90") Annotation( ) "gyrus fronto-orbitalis") AnnotationAssertion( "UBERON:0009836") AnnotationAssertion(rdfs:label "fronto-orbital gyrus") SubClassOf(Annotation( "NIF"^^xsd:string) ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lower rhombic lip) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Posterior portion of the rhombic lip contained within rhombomeres 2-8. Gives rise to several brainstem nuclei and choroid plexus.") AnnotationAssertion( "DHBA:10666") AnnotationAssertion( "TAO:0001441") AnnotationAssertion( "ZFA:0001441") AnnotationAssertion(Annotation( ) "caudal rhombic lip") AnnotationAssertion( "lower (caudal) rhombic lip") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009840") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "lower rhombic lip") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "ZFA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "ZFA"^^xsd:string) ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) SubClassOf(Annotation( "ZFA"^^xsd:string) ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) SubClassOf(Annotation( "ZFA"^^xsd:string) ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) SubClassOf(Annotation( "ZFA"^^xsd:string) ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) SubClassOf(Annotation( "ZFA"^^xsd:string) ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) SubClassOf(Annotation( "ZFA"^^xsd:string) ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) SubClassOf(Annotation( "ZFA"^^xsd:string) ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) # Class: (upper rhombic lip) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Anterior-most region of dorsal hindbrain within rhombomere 1, adjacent the midbrain-hindbrain boundary.") AnnotationAssertion( "DHBA:10665") AnnotationAssertion( "EHDAA2:0000229") AnnotationAssertion( "TAO:0001442") AnnotationAssertion( "ZFA:0001442") AnnotationAssertion(Annotation( "ZFA:0001442") "cerebellar anlage") AnnotationAssertion(Annotation( "ZFA:0001442") "presumptive cerebellum") AnnotationAssertion(Annotation( "DHB:URL") "rostral rhombic lip") AnnotationAssertion( "upper (rostral) rhombic lip") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "EHDAA2:0000229") "rhombomere 01 cerebellum primordium") AnnotationAssertion( "UBERON:0009841") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "upper rhombic lip") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "ZFA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "ZFA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "ZFA-def") ObjectSomeValuesFrom( )) # Class: (glandular acinus) AnnotationAssertion(Annotation( ) "The many-lobed berry cluster of cells that is the terminous of a gland where the secretion is produced is acinar in form.") AnnotationAssertion( "acinar") AnnotationAssertion(Annotation( "FMA:55588") "acinus") AnnotationAssertion( ) AnnotationAssertion( "FMA:55588") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "acini") AnnotationAssertion( "UBERON:0009842") AnnotationAssertion(rdfs:label "glandular acinus") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/9/99/Gray1105.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (prostate epithelial cord) AnnotationAssertion(Annotation( ) Annotation( "GO:0060527") Annotation( "OBOL:automatic"^^xsd:string) "A solid cord of prostate epithelium.") AnnotationAssertion(Annotation( ) "cord of prostate epithelium") AnnotationAssertion( "epithelial cord of prostate") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009843") AnnotationAssertion(rdfs:comment "Complexity is conferred on the prostate during a postnatal development phase known as branching morphogenesis. Solid cords of prostate epithelium formed in utero elongate postnatally and their tips are bifurcated into primary, secondary, and tertiary branches in a pattern that is unique for each prostate lobe. Branching morphogenesis proceeds differentially for each of the three mouse prostate lobes (ventral, dorsolateral, and anterior) and is completed by about postnatal day 20 in mice, providing each lobe with unique glandular architecture [5]. It is important to note that the developing human prostate undergoes a similar series of morphogenetic events especially during prostatic bud formation, but gives rise to a mature glandular prostate that is unique from the rodent and features peripheral, central, and transitional zones[PMID:18977204]") AnnotationAssertion(rdfs:label "prostate epithelial cord") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (urogenital sinus lumen) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An anatomical space that surrounded_by a primitive urogenital sinus.") AnnotationAssertion( "EHDAA2:0002142") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009844") AnnotationAssertion(rdfs:label "urogenital sinus lumen") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (urogenital sinus mesenchyme) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "Mesenchyme that surrounds primitive urogenital sinus.") AnnotationAssertion( "Androgen receptor (AR) activation releases instructive signals from UGM that acts on UGS epithelium (UGE) to stimulate cell proliferation, form prostate ductal progenitors (prostatic buds), and regulate cell adhesion dynamics to permit prostatic bud outgrowth") AnnotationAssertion( "EMAPA:31500") AnnotationAssertion(Annotation( ) Annotation( ) "UGM") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009845") AnnotationAssertion(rdfs:label "urogenital sinus mesenchyme") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (embryonic cloacal epithelium) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An epithelium that is part of a embryonic cloaca.") AnnotationAssertion(Annotation( "EHDAA2:0004585") "cloacal epithelium") AnnotationAssertion( "EHDAA2:0004585") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009846") AnnotationAssertion(rdfs:label "embryonic cloacal epithelium") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (prostate field) AnnotationAssertion(Annotation( ) Annotation( "GO:0060515") Annotation( "GOC:dph") "A specific region of the urogenital sinus epithelium into the area in which the prostate gland will develop.") AnnotationAssertion( "uberon") AnnotationAssertion( "prostate primordium") AnnotationAssertion( "UBERON:0009847") AnnotationAssertion(rdfs:label "prostate field") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (zona limitans intrathalamica) AnnotationAssertion(Annotation( ) Annotation( ) Annotation( ) Annotation( "GO:0022006") Annotation( "GOC:cls") Annotation( "GOC:dgh") Annotation( "GOC:dph") Annotation( "GOC:jid") Annotation( "GOC:mtg_15jun06") Annotation( "GO_REF:0000021") "A narrow stripe of cells that lies between the prospective dorsal and ventral thalami. This boundary contains signals that pattern the prethalamic and thalamic territories of the future mid-diencephalon.") AnnotationAssertion( "Modeling this as a line may not be correct - see http://code.google.com/p/caro2/issues/detail?id=17") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0001344") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "The border between the dorsal and ventral thalamus.[TAO]") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:36604") AnnotationAssertion( "TAO:0001344") AnnotationAssertion( "XAO:0004305") AnnotationAssertion( "ZFA:0001344") AnnotationAssertion(Annotation( "GO:0022006") Annotation( ) "ZLI") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "MDO") AnnotationAssertion(Annotation( ) "ZLI organizer") AnnotationAssertion(Annotation( ) "mid-diencephalic organizer") AnnotationAssertion( "UBERON:0009848") AnnotationAssertion(rdfs:label "zona limitans intrathalamica") SubClassOf( ) SubClassOf(Annotation( "ZFA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (tadpole stage) AnnotationAssertion(Annotation( ) Annotation( "ISBN:0471209627") Annotation( "ISSN:0003-276X") "Wholly aquatic larval stage in the life cycle of an amphibian, particularly of a frog or toad[WP]. XAO: The stages from feeding to the end of metamorphosis. Encompasses Weisz's first-form tadpole (equivalent to NF stages 45 to 49), second-form tadpole (NF 49 to 56) and third-form tadpole (NF 56 to 60-plus) stages.") AnnotationAssertion( ) AnnotationAssertion( "XAO:1000008") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009849") AnnotationAssertion(rdfs:label "tadpole stage") SubClassOf( ) # Class: (border of sublaminar layers S4 and S5) AnnotationAssertion(Annotation( ) Annotation( "GOC:tfm"^^xsd:string) "The intersection of sublaminar layers S4 and S5.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009851") AnnotationAssertion(rdfs:label "border of sublaminar layers S4 and S5") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) # Class: (border of sublaminar layers S2 and S3) AnnotationAssertion(Annotation( ) Annotation( "GOC:tfm"^^xsd:string) "The intersection of sublaminar layers S2 and S3.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009852") AnnotationAssertion(rdfs:label "border of sublaminar layers S2 and S3") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) # Class: (body of uterus) AnnotationAssertion(Annotation( ) "The part of the uterus above the isthmus and below the orifices of the uterine tubes.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "CALOHA:TS-1265") AnnotationAssertion( "EFO:0000382") AnnotationAssertion( "FMA:17739") AnnotationAssertion( "NCIT:C12316") AnnotationAssertion(Annotation( "ncithesaurus:Corpus_Uteri") "UMLS:C0227813") AnnotationAssertion(Annotation( ) "corpus uteri") AnnotationAssertion(Annotation( "FMA:17739") "uterine body") AnnotationAssertion(Annotation( "FMA:17739") "uterine corpus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009853") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "body of uterus") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (digestive tract diverticulum) AnnotationAssertion(Annotation( ) "Branch or outpocketing of the digestive tract.") AnnotationAssertion( "FBbt:00100316") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FBbt:00100316") "diverticulum of gut") AnnotationAssertion( "intestinal pouch") AnnotationAssertion( "UBERON:0009854") AnnotationAssertion(rdfs:label "digestive tract diverticulum") SubClassOf( ) SubClassOf( ) # Class: (sac) AnnotationAssertion( "galen:Diverticulum") AnnotationAssertion( "pouch") AnnotationAssertion( "uberon") AnnotationAssertion( "diverticulum") AnnotationAssertion( "UBERON:0009856") AnnotationAssertion(rdfs:label "sac") SubClassOf( ) # Class: (cavum septum pellucidum) AnnotationAssertion(Annotation( ) Annotation( "BTO:0003447") "A space enclosed within the laminae of the septum pelludicum, the membranous partition that seperates the frontal horns of the ventricle. contains cerebrospinal fluid (CSF) that filters from the ventricles through the septal laminae. bounded anteriorly by the genu of the corpus callosum; superiorly by the body of the corpus callosum; posteriorly by the anterior limb and pillars of the fornix; inferiorly by the anterior commissure and the rostrum of the corpus callosum; and laterally by the leaflets of the septum pellucidum.") AnnotationAssertion( "In humans, present in 100% of fetuses, but over 85% of them fuse by 3-6 months after birth") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:CSP") AnnotationAssertion( "BTO:0003447") AnnotationAssertion( "DHBA:12099") AnnotationAssertion( "FMA:61874") AnnotationAssertion( "NCIT:C32602") AnnotationAssertion(Annotation( "ncithesaurus:Fifth_Ventricle") "UMLS:C0228158") AnnotationAssertion(Annotation( "FMA:61874") "cave of septum pellucidum") AnnotationAssertion(Annotation( "FMA:61874") "cavum of septum pellucidum") AnnotationAssertion(Annotation( "FMA:61874") "septum pellucidum cave") AnnotationAssertion(Annotation( "FMA:61874") "ventriculus septi pellucidi") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "cavum septi pellucidi") AnnotationAssertion(Annotation( ) Annotation( ) "cavum septi pellucidi") AnnotationAssertion(Annotation( ) Annotation( "FMA:61874") "fifth ventricle") AnnotationAssertion( "UBERON:0009857") AnnotationAssertion(rdfs:label "cavum septum pellucidum") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/7/7d/CavumSeptumPellucidumDiagram.jpg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (outer fibrous layer of periosteum) AnnotationAssertion( "FMA:234354") AnnotationAssertion(Annotation( "FMA:234354") "capsular layer of periosteum") AnnotationAssertion( "external layer of periosteum") AnnotationAssertion( "external periosteum") AnnotationAssertion(Annotation( "FMA:234354") "fibrous layer of periosteum") AnnotationAssertion(Annotation( "FMA:234354") "outer fibrous layer of periosteum") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009858") AnnotationAssertion(rdfs:label "outer fibrous layer of periosteum") SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "Wikipedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (endosteum) AnnotationAssertion(Annotation( ) "A thin layer of connective tissue that lines the surface of the bony tissue that forms the medullary cavity of long bones.") AnnotationAssertion( "endosteal") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:32692") AnnotationAssertion( "NCIT:C13183") AnnotationAssertion(Annotation( "ncithesaurus:Endosteum") "UMLS:C0222658") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009859") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "endosteum") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/9/94/Illu_long_bone.jpg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (zone of stomach) AnnotationAssertion(Annotation( ) Annotation( "ISBN:0073040584"^^xsd:string) "A division of the stomach. The stomach can be divided based on mucosal histology (glandular epithelium and gastric glands) and the relative position and type of gastric gland.") AnnotationAssertion( "We follow Kardong in defining stomach regions by gland, but we also include 'body of stomach'. In future we may want to have different partitions of the stomach") AnnotationAssertion( "UBERON:0009034") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:35821") AnnotationAssertion( "FMA:14558") AnnotationAssertion( "MA:0002561") AnnotationAssertion(Annotation( "FMA:14558") "gastric zone") AnnotationAssertion( "region of stomach") AnnotationAssertion( "section of stomach") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009870") AnnotationAssertion(rdfs:label "zone of stomach") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/2/29/Regions_of_stomach.svg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (nephrogenic zone) AnnotationAssertion(Annotation( ) "Outer portion of the renal cortex. Site of formation of medullary and cortical elements.") AnnotationAssertion( "see http://www.ncbi.nlm.nih.gov/pubmed/12761251 for description of nephrogenic zone in dogfish.") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:27721") AnnotationAssertion( "MA:0002996") AnnotationAssertion(Annotation( ) "cortical nephrogenic niche") AnnotationAssertion(Annotation( ) "cortical nephrogenic zone") AnnotationAssertion( "uberon") AnnotationAssertion( "nephrogenic tissue") AnnotationAssertion( "UBERON:0009871") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "nephrogenic zone") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (metapodium region) AnnotationAssertion(Annotation( ) Annotation( "MA:th"^^xsd:string) "Intermediate segment of the autopod, between the mesopodial region and and acropodial region. Examples: metacarpal region, metatarsal region.") AnnotationAssertion( "considering adding 'acropodial region'") AnnotationAssertion( "Naming conventions for pod terms under discussion within phenoscape group") AnnotationAssertion( ) AnnotationAssertion( "metacarpal or metatarsal part of limb") AnnotationAssertion( "metacarpus/metatarsus region") AnnotationAssertion( "metapodial segment") AnnotationAssertion(Annotation( ) Annotation( "NCBITaxon:9788"^^xsd:string) "cannon region") AnnotationAssertion(Annotation( ) Annotation( "NCBITaxon:9788"^^xsd:string) "equine cannon region") AnnotationAssertion( "uberon") AnnotationAssertion( "metacarpus/metatarsus") AnnotationAssertion( "metapodium") AnnotationAssertion( "UBERON:0009877") AnnotationAssertion(rdfs:label "metapodium region") SubClassOf( ) SubClassOf(Annotation( "PHENOSCAPE:ni"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (mesopodial skeleton) AnnotationAssertion(Annotation( ) "The collection of all skeletal elements in a mesopodium. Examples: the tarsal skeleton, the carpal skeleton.") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "VSAO:0005022") Annotation( "VSAO"^^xsd:string) Annotation( "VSAO:NI") "Limb skeleton subdivision consisting of endochondral bones increasing the freedom of movement of the autopodia, and located between zeugopodia and autopodia.[VSAO]") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "VSAO:0005022") Annotation( "VSAO"^^xsd:string) "relationship type change: subclass skeletal subdivision (VSAO:0000042) CHANGED TO: distally_connected_to subdivision of skeleton (UBERON:0010912)[VSAO]") AnnotationAssertion( "VSAO:0005022") AnnotationAssertion(Annotation( "VSAO:0005022") Annotation( "VSAO:NI"^^xsd:string) "basipodium skeleton") AnnotationAssertion( "carpal/tarsal skeleton") AnnotationAssertion(Annotation( "VSAO:0005022") "mesopodial skeleton") AnnotationAssertion(Annotation( ) "mesopodium skeleton") AnnotationAssertion(Annotation( ) "skeletal parts of mesopodium") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "VSAO:0005022") Annotation( "VSAO:NI"^^xsd:string) "basipodium") AnnotationAssertion(Annotation( "VSAO:0005022") Annotation( "VSAO:NI"^^xsd:string) "mesopodium") AnnotationAssertion( "UBERON:0009878") AnnotationAssertion(rdfs:label "mesopodial skeleton") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (tarsal skeleton) AnnotationAssertion(Annotation( ) Annotation( "PHENOSCAPE:ad"^^xsd:string) Annotation( "VSAO:0005024") "Subdivision of skeleton that consists of endochondral elements distal to the zeugopodial skeletal elements which constitute the proximal region of the posterior autopod skeleton[PHENOSCAPE:ad].") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0000220") Annotation( "AAO"^^xsd:string) Annotation( "AAO:LAP"^^xsd:string) "Segment of the leg corresponding to the tarsus. It consists of several elements that articulate with the tibia and fibula at one end and the metatarsals at the other end.[AAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001160") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "DOI:10.1002/jez.1100 Wagner GP, Chiu C, The tetrapod limb: A hypothesis on its origin. J Exp Zool (Mol Dev Evol) (2001)") "The three main outgroup taxa of tetrapods, panderichthyids, osteolepiforms, and rhizodontids, have endoskeletal elements corresponding to the stylo- and zeugopodial elements in a tetrapod limb. In addition, there are elements that share the position and possibly the developmental derivation of the ulnare and the intermedium. From these observations, most authors have concluded that the stylo- and zeugopodial elements as well as the proximal mesopodial elements have counterparts in the fins of tetrapod ancestors, but there are no indications of wrist or ankle joints.[well established][VHOG]") AnnotationAssertion(Annotation( "PHENOSCAPE:ad") "Not always associated with digits, in sarcopterygians the ulnare is present without true digits being formed, though their homologous radial elements are present") AnnotationAssertion(Annotation( "MA"^^xsd:string) "we assume MA:tarsus belongs here, as there is a distinct class MA:ankle, with the tarsal bone being part of the former. XAO:tarsus is part of the hindlimb skeleton. FMA set-of class lacks definition but we assume this to be equivalent.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0000220") AnnotationAssertion( "EMAPA:19133") AnnotationAssertion( "FMA:71339") AnnotationAssertion( "GAID:1223") AnnotationAssertion( "MA:0000050") AnnotationAssertion( "VHOG:0001160") AnnotationAssertion( "VSAO:0005024") AnnotationAssertion( "XAO:0003211") AnnotationAssertion( "hind mesopodial skeleton") AnnotationAssertion( "hind mesopodium") AnnotationAssertion( "hind mesopodium skeleton") AnnotationAssertion(Annotation( "FMA:71339") "set of tarsal bones") AnnotationAssertion( "skeletal parts of hind mesopodium") AnnotationAssertion(Annotation( "FMA:71339") "tarsal bones set") AnnotationAssertion(Annotation( "XAO:0003211") "tarsalia") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "VSAO:0005024") "basipodium") AnnotationAssertion(Annotation( "VSAO:0005024") "mesopodium") AnnotationAssertion( "tarsal bones") AnnotationAssertion(Annotation( "XAO:0003211") "tarsus") AnnotationAssertion( "UBERON:0009879") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "tarsal skeleton") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (carpal skeleton) AnnotationAssertion(Annotation( ) Annotation( "PHENOSCAPE:ad"^^xsd:string) "Subdivision of skeleton that consists of the endochondral elements distal to the anterior limb/fin zeugopodial skeletal elements which constitute the proximal region of the anterior autopod skeleton[PHENOSCAPE:ad].") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0000201") Annotation( "AAO"^^xsd:string) Annotation( "AAO:LAP"^^xsd:string) "Segment of the forearm corresponding to the carpus. It consists of several elements that articulate with the radius and ulna at one end and the metacarpals at the other end.[AAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001161") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "DOI:10.1002/jez.1100 Wagner GP, Chiu C, The tetrapod limb: A hypothesis on its origin. J Exp Zool (Mol Dev Evol) (2001)") "The three main outgroup taxa of tetrapods, panderichthyids, osteolepiforms, and rhizodontids, have endoskeletal elements corresponding to the stylo- and zeugopodial elements in a tetrapod limb. In addition, there are elements that share the position and possibly the developmental derivation of the ulnare and the intermedium. From these observations, most authors have concluded that the stylo- and zeugopodial elements as well as the proximal mesopodial elements have counterparts in the fins of tetrapod ancestors, but there are no indications of wrist or ankle joints.[well established][VHOG]") AnnotationAssertion(Annotation( ) "Not always associated with digits, in sarcopterygians the ulnare is present without true digits being formed, though their homologous radial elements are present[PHENOSCAPE:ad].") AnnotationAssertion( "The structure of the carpus varies widely between different groups of tetrapods, even among those that retain the full set of five digits. In primitive fossil amphibians, such as Eryops, the carpus consists of three rows of bones; a proximal row of three carpals, a second row of four bones, and a distal row of five bones. The proximal carpals are referred to as the radiale, intermediale, and ulnare, after their proximal articulations, and are homologous with the scaphoid, lunate, and triquetal bones respectively. The remaining bones are simply numbered, as the first to fourth centralia (singular: centrale), and the first to fifth distal carpals. Primitively, each of the distal bones appears to have articulated with a single metacarpal. However, the vast majority of later vertebrates, including modern amphibians, have undergone varying degrees of loss and fusion of these primitive bones, resulting in a smaller number of carpals. Almost all mammals and reptiles, for example, have lost the fifth distal carpal, and have only a single centrale - and even this is missing in humans. The pisiform bone is somewhat unusual, in that it first appears in primitive reptiles, and is never found in amphibians. Because many tetrapods have less than five digits on the forelimb, even greater degrees of fusion are common, and a huge array of different possible combinations are found. The wing of a modern bird, for example, has only two remaining carpals; the radiale (the scaphoid of mammals) and a bone formed from the fusion of four of the distal carpals. In some macropods, the scaphoid and lunar bones are fused into the scaphollunar bone") AnnotationAssertion(Annotation( "MA"^^xsd:string) "we assume MA:carpus belongs here, as there is a distinct class MA:wrist, with the carpal bone being part of the former. XAO:carpus is part of the forelimb skeleton. FMA set-of class lacks definition but we assume this to be equivalent.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0000201") AnnotationAssertion( "FMA:71335") AnnotationAssertion( "MA:0000040") AnnotationAssertion( "VHOG:0001161") AnnotationAssertion( "VSAO:0005023") AnnotationAssertion( "XAO:0003207") AnnotationAssertion(Annotation( "EMAPA:25056") Annotation( "FMA:71335") "carpal bones") AnnotationAssertion(Annotation( "FMA:71335") "carpal bones set") AnnotationAssertion( "fore mesopodial skeleton") AnnotationAssertion( "fore mesopodium skeleton") AnnotationAssertion( "ossa carpi") AnnotationAssertion( "skeletal parts of fore mesopodium") AnnotationAssertion( "skeleton of carpus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "MA:0000040") Annotation( "XAO:0003207") "carpus") AnnotationAssertion(Annotation( "AAO:0000201") "fore mesopodium") AnnotationAssertion(Annotation( ) Annotation( ) "ossa carpi") AnnotationAssertion(Annotation( "FMA:71335") "set of carpal bones") AnnotationAssertion( "UBERON:0009880") AnnotationAssertion(rdfs:label "carpal skeleton") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/5/58/Carpus.svg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (anterior lateral plate mesoderm) AnnotationAssertion( "EFO:0003704") AnnotationAssertion( "TAO:0005041") AnnotationAssertion( "ZFA:0005041") AnnotationAssertion(Annotation( "ZFA:0005041") "ALPM") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009881") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "anterior lateral plate mesoderm") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "ZFA"^^xsd:string) ObjectSomeValuesFrom( )) DisjointClasses(Annotation( "lexical"^^xsd:string) ) # Class: (anal column) AnnotationAssertion(Annotation( ) "One of a number of vertical folds, produced by an infolding of the mucous membrane and some of the muscular tissue in the upper half of the lumen of the anal canal[WP].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:15713") AnnotationAssertion( "NCIT:C32067") AnnotationAssertion(Annotation( "ncithesaurus:Anal_Column") "UMLS:C0227428") AnnotationAssertion(Annotation( "FMA:15713") "column of Morgagni") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "columnae anales") AnnotationAssertion( "UBERON:0009882") AnnotationAssertion(rdfs:label "anal column") AnnotationAssertion( "https://upload.wikimedia.org/wikipedia/commons/0/01/Gray1078.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (medullary ray) AnnotationAssertion(Annotation( ) Annotation( "MP:0011347") "A renal, cortical lobule, consisting of the ascending or descending limbs of the loop of Henle or of the collecting tubules; medullary rays are regions where parallel arrays of straight tubules travel perpendicular to the capsule and extend from the cortex to the medulla.") AnnotationAssertion(Annotation( "FMA"^^xsd:string) "FMA says parenchyma, MP says cortex") AnnotationAssertion( "Their name is potentially misleading -- the 'medullary' refers to their destination, not their location. They are located only in the renal cortex, and not in the renal medulla") AnnotationAssertion( ) AnnotationAssertion( "BTO:0001155") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37906") AnnotationAssertion( "FMA:74299") AnnotationAssertion(Annotation( "MP:0011347") "Ferrein's pyramid") AnnotationAssertion(Annotation( "MP:0011347") "kidney medullary ray") AnnotationAssertion(Annotation( "MP:0011347") "renal medullary ray") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009883") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "medullary ray") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf(Annotation( "MP"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) SubClassOf( ObjectSomeValuesFrom( )) # Class: (interlobar artery) AnnotationAssertion(Annotation( ) Annotation( ) "An artery that supplies a renal lobe.") AnnotationAssertion(Annotation( "FMA"^^xsd:string) "FMA only has the set term") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37091") AnnotationAssertion( "FMA:71637") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) Annotation( ) "arteriae interlobares renis") AnnotationAssertion(Annotation( "FMA:71637") "interlobar artery of kidney") AnnotationAssertion( "kidney interlobar artery") AnnotationAssertion(Annotation( "MP:0011355") "renal interlobar artery") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "arteriae interlobares renis") AnnotationAssertion(Annotation( "FMA:71637") "interlobar arteries of kidney") AnnotationAssertion(Annotation( "FMA:71637") "set of interlobar arteries of kidney") AnnotationAssertion( "UBERON:0009885") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "interlobar artery") AnnotationAssertion( "Kidney:PioM.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (interlobar vein) AnnotationAssertion(Annotation( ) "The interlobar veins are veins of the renal circulation which drain the renal lobes.") AnnotationAssertion(Annotation( "FMA"^^xsd:string) "FMA only has the set term") AnnotationAssertion( ) AnnotationAssertion( "FMA:71631") AnnotationAssertion(Annotation( "FMA:71631") "interlobar vein of kidney") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) Annotation( ) "venae interlobares renis") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:71631") "interlobar veins of kidney") AnnotationAssertion(Annotation( "FMA:71631") "set of interlobar veins of kidney") AnnotationAssertion(Annotation( ) Annotation( ) "venae interlobares renis") AnnotationAssertion( "UBERON:0009887") AnnotationAssertion(rdfs:label "interlobar vein") AnnotationAssertion( "Kidney:PioM.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (Koller's sickle) AnnotationAssertion(Annotation( ) Annotation( ) "A local thickening of cells that acts as a margin separating sheets of cells from posterior margin of avian blastoderms from hypoblasts as they migrate anteriorly to push primary hypoblast cells anteriorly to form a secondary hypoblast known as the endoblast.") AnnotationAssertion( ) AnnotationAssertion( "Kohler's sickle") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009888") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "Koller's sickle") SubClassOf( ) # Class: (secondary heart field) AnnotationAssertion(Annotation( "GO:0003139") Annotation( "GOC:mtg_heart") Annotation( "GOC:rl") "A specific region of the lateral mesoderm that will form the majority of the mesodermal component of the right ventricle, arterial pole (outflow tract) and venous pole (inflow tract).") AnnotationAssertion(Annotation( ) "extra-cardiac population of mesodermal progenitors that gives rise to the right ventricle and outflow tract[PMID:17276708].") AnnotationAssertion(Annotation( ) "In general, the two studies in chick concluded that the contribution of the SHF was to the outflow tract, whereas the mouse work suggested that the second lineage contributed more broadly to the heart, including the outflow tract and much or all of the right ventricle [11-14]. These different conclusions may represent differences in the experimental approaches used or may represent bona fide differences in the contribution of the second lineage to the hearts of birds compared to mammals [11]. Alternatively, the secondary/anterior heart fields described in the chick may represent a subset of a broader field that makes a more substantial contribution to the heart, as the mouse studies suggested") AnnotationAssertion( "in mouse has left ventricular identity[PMID:22855565]") AnnotationAssertion( "XAO:0004186") AnnotationAssertion(Annotation( ) "anterior heart field") AnnotationAssertion(Annotation( "Geisha:syn") Annotation( "NCBITaxon:8782"^^xsd:string) "anterior/second heart field") AnnotationAssertion(Annotation( "XAO:0004186") "second heart field") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "XAO:0004186") "SHF") AnnotationAssertion( "UBERON:0009889") AnnotationAssertion(rdfs:label "secondary heart field") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "GO:0003129") ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (anterior intestinal portal) AnnotationAssertion(Annotation( ) "Opening of the foregut into the midgut.") AnnotationAssertion(Annotation( ) "fovea cardiaca") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009890") AnnotationAssertion(rdfs:label "anterior intestinal portal") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (facial mesenchyme) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "Mesenchyme that is part of a developing face.") AnnotationAssertion( "EMAPA:35337") AnnotationAssertion( "FMA:302884") AnnotationAssertion( "face mesenchyme") AnnotationAssertion( "mesenchyme of face") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009891") AnnotationAssertion(rdfs:label "facial mesenchyme") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (siphon primordium) AnnotationAssertion( "ANISEED:1210451") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009894") AnnotationAssertion(rdfs:label "siphon primordium") SubClassOf( ) # Class: (atrial siphon primordia) AnnotationAssertion( "ANISEED:1210456") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009895") AnnotationAssertion(rdfs:label "atrial siphon primordia") SubClassOf( ) # Class: (oral siphon primordia) AnnotationAssertion( "ANISEED:1225922") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009896") AnnotationAssertion(rdfs:label "oral siphon primordia") SubClassOf( ) # Class: (right auditory cortex) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An auditory cortex that is in the left side of a brain.") AnnotationAssertion( "https://github.com/obophenotype/uberon/wiki/Modeling-paired-structures-Design-Pattern"^^xsd:anyURI) AnnotationAssertion( "FMA:242654") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009897") AnnotationAssertion(rdfs:label "right auditory cortex") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (left auditory cortex) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An auditory cortex that is in the right side of a brain.") AnnotationAssertion( "https://github.com/obophenotype/uberon/wiki/Modeling-paired-structures-Design-Pattern"^^xsd:anyURI) AnnotationAssertion( "FMA:242656") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009898") AnnotationAssertion(rdfs:label "left auditory cortex") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pole of cerebral hemisphere) AnnotationAssertion(Annotation( ) "The anterior end of the hemisphere is named the frontal pole. The posterior end is named the occipital pole. The anterior end of the temporal lobe, the temporal pole.") AnnotationAssertion( ) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009899") AnnotationAssertion(rdfs:label "pole of cerebral hemisphere") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/e/e3/Human_brain_lateral_view_description.JPG"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (root of optic nerve) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A nerve root that extends_fibers_into a nerve connecting eye with brain.") AnnotationAssertion( "TODO - check. See comments for optic tract. FMA also has medial root.") AnnotationAssertion( "BIRNLEX:1328") AnnotationAssertion( "FMA:84573") AnnotationAssertion(Annotation( "BIRNLEX:1328") "optic nerve root") AnnotationAssertion(Annotation( "FMA:84573") "optic tract root") AnnotationAssertion(Annotation( "FMA:84573") "root of optic tract") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009906") AnnotationAssertion(rdfs:label "root of optic nerve") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (sensory root of trigeminal nerve) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:s5") AnnotationAssertion( "BAMS:sV") AnnotationAssertion( "DHBA:12867") AnnotationAssertion( "FMA:52611") AnnotationAssertion( "MBA:229") AnnotationAssertion(Annotation( "FMA:52611") "radix sensoria (nervus trigeminus [v])") AnnotationAssertion(Annotation( "FMA:52611") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "radix sensoria nervus trigemini") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BAMS:s5") "sensory root of the trigeminal nerve") AnnotationAssertion(Annotation( "BAMS:sV") "sensory root of the trigeminal nerve") AnnotationAssertion( "UBERON:0009907") AnnotationAssertion(rdfs:label "sensory root of trigeminal nerve") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf(Annotation( "Wikipedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (caudal root of abducens nerve) AnnotationAssertion( "TAO:0000179") AnnotationAssertion( "ZFA:0000179") AnnotationAssertion(Annotation( "ZFA:0000179") "radix caudalis nervi abducentis") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009908") AnnotationAssertion(rdfs:label "caudal root of abducens nerve") SubClassOf( ) # Class: (rostral root of abducens nerve) AnnotationAssertion( "TAO:0000665") AnnotationAssertion( "ZFA:0000665") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009909") AnnotationAssertion(rdfs:label "rostral root of abducens nerve") SubClassOf( ) # Class: (posterior lateral plate mesoderm) AnnotationAssertion( "EFO:0003705") AnnotationAssertion( "TAO:0005042") AnnotationAssertion( "ZFA:0005042") AnnotationAssertion(Annotation( "ZFA:0005042") "PLPM") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009910") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "posterior lateral plate mesoderm") SubClassOf(Annotation( "ZFA"^^xsd:string) ) SubClassOf( ) SubClassOf(Annotation( "ZFA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (lobule) AnnotationAssertion( "todo - provide definition. Clearly distinguish between lobules, lobes and acinar parts of glands (see for example lobule of mammary gland)") AnnotationAssertion( ) AnnotationAssertion( "FMA:45737") AnnotationAssertion( "NCIT:C12990") AnnotationAssertion(Annotation( "ncithesaurus:Lobule") "UMLS:C0921005") AnnotationAssertion(Annotation( "FMA:45737") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "lobulus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009911") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "lobule") SubClassOf(Annotation( "cjm"^^xsd:string) ) # Class: (anatomical lobe) AnnotationAssertion(Annotation( "ncithesaurus:Lobe") "A portion of an organ, such as the liver, lung, breast, or brain.") AnnotationAssertion( ) AnnotationAssertion( "FMA:45728") AnnotationAssertion( "NCIT:C13393") AnnotationAssertion(Annotation( "FMA:45728") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "lobus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009912") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "anatomical lobe") SubClassOf(Annotation( "cjm"^^xsd:string) ) # Class: (renal lobe) AnnotationAssertion(Annotation( ) Annotation( "MP:0011381") "The portion of a kidney consisting of a renal medullary pyramid and the renal cortex above it[MP]. It is composed of many renal lobules[WP].") AnnotationAssertion( "todo - add has_part relationships.") AnnotationAssertion(Annotation( "MP"^^xsd:string) "human kidneys have multilobar (multipyramidal) architecture while mice and rats have unilobar (unipyramidal) kidneys") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:17881") AnnotationAssertion( "NCIT:C32894") AnnotationAssertion(Annotation( "ncithesaurus:Kidney_Lower_Lobe") "UMLS:C0736382") AnnotationAssertion(Annotation( "MP:0011381") "kidney lobe") AnnotationAssertion(Annotation( ) Annotation( ) "lobi renalis") AnnotationAssertion(Annotation( ) "lobus renalis") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "lobi renales") AnnotationAssertion( "UBERON:0009913") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "renal lobe") AnnotationAssertion( "Kidney:PioM.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (renal lobule) AnnotationAssertion(Annotation( ) Annotation( "MP:0011382") "The portion of a renal lobe consisting of nephrons grouped around a single medullary ray and draining into a single collecting duct; human kidneys have multilobular, multipapillary architecture while mice and rats have unilobular, unipapillary kidneys.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:17670") AnnotationAssertion(Annotation( "MP:0011382") "kidney lobule") AnnotationAssertion( "lobulus renalis") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( "MP:0011382") "cortical lobule") AnnotationAssertion(Annotation( ) "cortical lobule of kidney") AnnotationAssertion(Annotation( ) Annotation( ) "lobuli corticales renis") AnnotationAssertion(Annotation( ) "lobulus corticalis renalis") AnnotationAssertion(Annotation( ) "renal cortical lobule") AnnotationAssertion(Annotation( ) "renculus") AnnotationAssertion(Annotation( ) "reniculus") AnnotationAssertion(Annotation( ) "renunculus") AnnotationAssertion( "UBERON:0009914") AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "Alternate definition: One of the subdivisions of the kidney, consisting of a medullary ray and that portion of the convoluted port (renal corpuscles and convoluted tubules) associated with its collecting duct. -http://www.mondofacto.com/facts/dictionary?lobulus+corticalis+renalis") AnnotationAssertion(rdfs:label "renal lobule") SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (wall of ureter) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An anatomical wall that is part of a ureter.") AnnotationAssertion( ) AnnotationAssertion( "FMA:15888") AnnotationAssertion(Annotation( "FMA:15888") "ureteral wall") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009916") AnnotationAssertion(rdfs:label "wall of ureter") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (kidney corticomedullary boundary) AnnotationAssertion(Annotation( "MP:0011376") "The region demarcating the renal medulla from the surrounding cortex; end-stage renal failure may be associated with loss of the normal corticomedullary boundary.") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37886") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009917") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "kidney corticomedullary boundary") SubClassOf( ) SubClassOf(Annotation( "MP"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (retrotrapezoid nucleus) AnnotationAssertion(Annotation( "MP:0011406") "The loose collection of neurons that reside in the rostral medulla close to the medullary surface, ventral and immediately caudal of nVII, that are crucial for CO2 sensing in the brain.") AnnotationAssertion( "DHBA:12531") AnnotationAssertion( "DMBA:17327") AnnotationAssertion( "MA:0003022") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009918") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "retrotrapezoid nucleus") SubClassOf( ) # Class: (ureter smooth muscle) AnnotationAssertion(Annotation( "MP:0011426") "The smooth muscle tissue surrounding the epithelium of the ureter.") AnnotationAssertion( "EMAPA:28811") AnnotationAssertion(Annotation( "MP:0011426") "ureteral smooth muscle") AnnotationAssertion(Annotation( "EMAPA:28844") "ureteral smooth muscle layer") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009919") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "ureter smooth muscle") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (optic neural crest) AnnotationAssertion( "EHDAA2:0001315") AnnotationAssertion( "EHDAA:1122") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009920") AnnotationAssertion(rdfs:label "optic neural crest") SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (olfactory bulb plexiform layer) AnnotationAssertion( "check if the NIF class is actually a grouping class") AnnotationAssertion(Annotation( "NLXANAT:20090405") "plexiform layer") AnnotationAssertion( "NLXANAT:20090405") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009950") AnnotationAssertion(rdfs:label "olfactory bulb plexiform layer") SubClassOf(Annotation( "NIFSTD"^^xsd:string) ) # Class: (main olfactory bulb) AnnotationAssertion(Annotation( ) "The main olfactory bulb has a multi-layered cellular architecture. In order from surface to the center the layers are: Glomerular layer, External plexiform layer, Mitral cell layer, Internal plexiform layer, Granule cell layer[WP].") AnnotationAssertion( "the structure in many ontologies called simply 'olfactory bulb' may in fact belong here") AnnotationAssertion( ) AnnotationAssertion( "BAMS:MOB") AnnotationAssertion( "MBA:507") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009951") AnnotationAssertion(rdfs:label "main olfactory bulb") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "cjm"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (dentate gyrus subgranular zone) AnnotationAssertion(Annotation( ) "A narrow layer of cells located between the granule cell layer and hilus of the dentate gyrus, where adult neurogenesis occurs.") AnnotationAssertion(Annotation( ) "SGZ") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:35831") AnnotationAssertion( "MA:0003149") AnnotationAssertion( "MBA:10702") AnnotationAssertion( "subgranular zone") AnnotationAssertion( "subgranular zone of dentate gyrus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009952") AnnotationAssertion(rdfs:label "dentate gyrus subgranular zone") AnnotationAssertion( "Doublecortin:expression-2.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (post-embryonic organism) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A multicellular organism that existence_starts_with a post-embryonic stage.") AnnotationAssertion( "MA:0002405") AnnotationAssertion( "postnatal organism") AnnotationAssertion(Annotation( "MA:0002405") "TS28 mouse") AnnotationAssertion(Annotation( ) "post-hatching organism") AnnotationAssertion(Annotation( ) "post-natal organism") AnnotationAssertion(Annotation( "MA:0002405") "postnatal mouse") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009953") AnnotationAssertion(rdfs:label "post-embryonic organism") AnnotationAssertion(rdfs:seeAlso "https://github.com/obophenotype/uberon/issues/667"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (vomeronasal system) AnnotationAssertion(Annotation( ) "A vertebrate nasal chemosensory system that is responsible for detecting intraspecific pheromonal cues as well as environmental odorants.") AnnotationAssertion( "check relationship to olfactory system. Evolution: The morphological components of the VNS are found only in tetrapods, but the genetic components of the system have been found in teleost fish, in addition to tetrapods. In tetrapods, the VNS was thought to be the olfactory system for detecting pheromones, while the main olfactory system detected general odorants (Scalia and Winans 1975). However, experimental evidence suggests that there is not such a clear functional distinction (Restrepo et al. 2004; Baxi, Dorries, and Eisthen 2006; Spehr et al. 2006; Kelliher 2007). Sea lampreys produce unique bile acids which act as pheromones both in migration and mate finding (Li, Sorensen, and Gallaher 1995; Li et al. 2002; Siefkes and Li 2004). However, bile acids in teleost fish are known to require components of the main olfactory signal transduction pathway (Hansen et al. 2003), and interruption of the VNS signal transduction pathway had no effect on bile acid olfactory response (Hansen et al. 2003)[Grus - EVOLUTION OF THE VOMERONASAL SYSTEM VIEWED THROUGH SYSTEM-SPECIFIC GENES]") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009954") AnnotationAssertion(rdfs:label "vomeronasal system") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (neurogenic placode) AnnotationAssertion(Annotation( ) Annotation( ) "Cranial ectodermal placode with potential to develop into a component of the nervous system, such as nerves or ganglia.") AnnotationAssertion( "Includes: trigeminal, otic, lateral line and epibranchial placodes.") AnnotationAssertion(Annotation( "NCBIBook:NBK53171") "While some sensory placodes (otic and olfactory) may have homologues in basal chordates (Wada et al., 1998), the so-called neurogenenic placodes (trigeminal, otic, lateral line and epibranchial placodes) appear to have emerged at a later time (Shimeld and Holland, 2000)") AnnotationAssertion( ) AnnotationAssertion( "EFO:0003460") AnnotationAssertion( "TAO:0001309") AnnotationAssertion( "XAO:0004620") AnnotationAssertion( "ZFA:0001309") AnnotationAssertion(Annotation( "ZFA:0001309") Annotation( ) "neurogenic placodes") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "placodae neurogenicae") AnnotationAssertion( "UBERON:0009955") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "neurogenic placode") SubClassOf(Annotation( "cjm"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses( ) # Class: (bladder lumen) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An anatomical space that is enclosed by a urinary bladder.") AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0004058") AnnotationAssertion( "FMA:15924") AnnotationAssertion( "galen:UrinaryBladderCavity") AnnotationAssertion(Annotation( "FMA:15924") "bladder cavity") AnnotationAssertion(Annotation( "FMA:15924") "cavity of urinary bladder") AnnotationAssertion(Annotation( "FMA:15924") "lumen of urinary bladder") AnnotationAssertion(Annotation( "FMA:15924") "urinary bladder lumen") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009958") AnnotationAssertion(rdfs:label "bladder lumen") SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lumen of oropharynx) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An anatomical space that is enclosed by a oropharynx.") AnnotationAssertion( "EHDAA2:0004556") AnnotationAssertion( "FMA:55095") AnnotationAssertion(Annotation( "EHDAA2:0004556") "oropharyngeal cavity") AnnotationAssertion(Annotation( "FMA:55095") "oropharynx lumen") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009959") AnnotationAssertion(rdfs:label "lumen of oropharynx") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (esophagus smooth muscle circular layer) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A circular muscle layer of muscular coat that is part of a esophagus.") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37523") AnnotationAssertion( "FMA:67605") AnnotationAssertion( "MA:0001574") AnnotationAssertion(Annotation( "FMA:67605") "circular muscle layer of esophagus") AnnotationAssertion(Annotation( "FMA:67605") "inner circular muscle layer of esophagus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "MA:0001574") "esophagus smooth muscle circular layer") AnnotationAssertion( "UBERON:0009960") AnnotationAssertion(rdfs:label "esophagus smooth muscle circular layer") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "MA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (esophagus smooth muscle longitudinal layer) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37524") AnnotationAssertion( "FMA:63573") AnnotationAssertion( "MA:0001575") AnnotationAssertion(Annotation( "FMA:63573") "longitudinal muscle layer of esophagus") AnnotationAssertion(Annotation( "FMA:63573") "outer longitudinal muscle layer of esophagus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "MA:0001575") "esophagus smooth muscle longitudinal layer") AnnotationAssertion( "UBERON:0009961") AnnotationAssertion(rdfs:label "esophagus smooth muscle longitudinal layer") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "MA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (excretory gland) AnnotationAssertion(Annotation( "Dorlands_Medical_Dictionary:MerckSource") "A gland that discharges its secretion through a duct opening on an internal or external surface of the body, as a lacrimal gland.") AnnotationAssertion( "TODO - child terms") AnnotationAssertion( "BTO:0000431") AnnotationAssertion(Annotation( ) "renal gland") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009962") AnnotationAssertion(rdfs:label "excretory gland") SubClassOf(Annotation( "BTO"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (internodal tract) AnnotationAssertion(Annotation( ) "A conducting pathway in the conducting tissue of heart through which electrical activity spreads from the SA node to the AV node.") AnnotationAssertion( "include 3 subtypes?") AnnotationAssertion(Annotation( ) "evidence is sparse [http://www.gpnotebook.co.uk/simplepage.cfm?ID=-483065798] There is some functional evidence for the existence of specialized conducting pathways within the atria (termed internodal tracts), although this is controversial") AnnotationAssertion( "FMA:9479") AnnotationAssertion( "interatrial conduction tract") AnnotationAssertion( "internodal conduction tract") AnnotationAssertion(Annotation( "FMA:9479") "internodal fasciculus") AnnotationAssertion(Annotation( "FMA:9479") "internodal tract muscle tissue") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009966") AnnotationAssertion(rdfs:label "internodal tract") SubClassOf( ) SubClassOf(Annotation( "cjm"^^xsd:string) ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (spleen venous sinus) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37751") AnnotationAssertion( "FMA:62815") AnnotationAssertion( "MA:0000761") AnnotationAssertion( "NCIT:C33605") AnnotationAssertion(Annotation( "ncithesaurus:Splenic_Sinus") "UMLS:C1179415") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) Annotation( ) "sinus lienalis") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) Annotation( ) "sinus splenicus") AnnotationAssertion(Annotation( "FMA:62815") "splenic sinus") AnnotationAssertion(Annotation( "FMA:62815") "venous sinus of red pulp of spleen") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009967") AnnotationAssertion(rdfs:label "spleen venous sinus") AnnotationAssertion(rdfs:seeAlso ) SubClassOf( ) SubClassOf(Annotation( "cjm"^^xsd:string) ) SubClassOf(Annotation( "MA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (primitive superior sagittal sinus) AnnotationAssertion( "consider merging into developed structure") AnnotationAssertion( "EHDAA2:0001527") AnnotationAssertion( "EHDAA:9876") AnnotationAssertion( "EMAPA:18636") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009968") AnnotationAssertion(rdfs:label "primitive superior sagittal sinus") SubClassOf( ) SubClassOf(Annotation( "cjm"^^xsd:string) ) SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (statoacoustic epithelium) AnnotationAssertion( "FMA:64804") AnnotationAssertion(Annotation( "FMA:64804") "stato-acoustic epithelium") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009969") AnnotationAssertion(rdfs:label "statoacoustic epithelium") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (epithelium of pancreatic duct) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An epithelium that is part of a pancreatic duct.") AnnotationAssertion( "in EHDAA2, the embryonic pancreatic ducts (dorsal, ventral) are classified as eithelial sacs, which would render them subclasses of this") AnnotationAssertion( "EFO:0002556") AnnotationAssertion( "FMA:67681") AnnotationAssertion(Annotation( "FMA:67681") "pancreatic duct epithelium") AnnotationAssertion(Annotation( "FMA:67681") "pancreatic ductal epithelium") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009970") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "epithelium of pancreatic duct") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (principal gastric gland) AnnotationAssertion(Annotation( ) Annotation( "MP:0003892") "One of the gastric glands that secretes the hydrochloric acid of the gastric juice[Stedman's].") AnnotationAssertion(Annotation( "FMA"^^xsd:string) "FMA has this as part of both the fundus and the body, but these are largely spatially disjoint.") AnnotationAssertion(Annotation( "MP:0003892") "gastric gland") AnnotationAssertion( "FMA:14921") AnnotationAssertion( "FMA:14923") AnnotationAssertion(Annotation( ) "acid gland") AnnotationAssertion(Annotation( "FMA:14921") "glandula gastrica propria") AnnotationAssertion(Annotation( "FMA:14921") "main gastric gland") AnnotationAssertion(Annotation( "FMA:14921") "oxyntic gland") AnnotationAssertion(Annotation( "FMA:14923") "principal gland of fundus of stomach") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "MP:0003892") "Wassman gland") AnnotationAssertion(Annotation( "MP:0003892") "gastric follicle") AnnotationAssertion( "UBERON:0009971") AnnotationAssertion(rdfs:label "principal gastric gland") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (ureteropelvic junction) AnnotationAssertion(Annotation( "MP:0011487") "The junction between the ureter and the renal pelvis of the kidney.") AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37782") AnnotationAssertion( "FMA:15898") AnnotationAssertion( "MA:0003021") AnnotationAssertion( "NCIT:C106203") AnnotationAssertion(Annotation( "FMA:15898") "pelviureteric junction") AnnotationAssertion( "pelvoureteric junction") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009972") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "ureteropelvic junction") SubClassOf( ) SubClassOf(Annotation( "MP"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (ureterovesical junction) AnnotationAssertion(Annotation( "MP:0011488") "The valve-like structure found at the site of entry of the ureter into the urinary bladder, normally displays an oblique angulation through the detrusor to avoid reflux of urine up the ureters and the kidney.") AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37783") AnnotationAssertion( "FMA:15899") AnnotationAssertion( "MA:0003020") AnnotationAssertion( "NCIT:C106202") AnnotationAssertion(Annotation( "MA:0003020") "vesico-ureteral junction") AnnotationAssertion( "vesico-ureteric junction") AnnotationAssertion( "vesicoureteric junction") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009973") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "ureterovesical junction") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "MP"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lumen of Rathke's pouch) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An anatomical cavity that surrounded_by a Rathke's pouch.") AnnotationAssertion( "EHDAA2:0004138") AnnotationAssertion( "EMAPA:25037") AnnotationAssertion(Annotation( "EHDAA2:0004138") "Rathkes pouch invagination") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009974") AnnotationAssertion(rdfs:label "lumen of Rathke's pouch") SubClassOf(Annotation( "EHDAA2"^^xsd:string) ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2-modified") ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (remnant of lumen of Rathke's pouch) AnnotationAssertion( "requires review") AnnotationAssertion( "EHDAA2:0004139") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "EHDAA2:0004139") "adenohypophysis invagination") AnnotationAssertion( "UBERON:0009975") AnnotationAssertion(rdfs:label "remnant of lumen of Rathke's pouch") SubClassOf(Annotation( "EHDAA2"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (hypothalamo-hypophyseal system) AnnotationAssertion(Annotation( ) Annotation( "ISBN:0471888893"^^xsd:string) "An intrinsic circulatory network that transports hormones from the median eminence of the hypothalamus to the adenohypophysis.") AnnotationAssertion( "we represent this structure strictly as a system of blood vessels (presumably in line with the FMA). It could also be extended to include neurons and fiber tracts, as per the MESH definition") AnnotationAssertion(Annotation( "ISBN:0471888893"^^xsd:string) ) AnnotationAssertion(Annotation( "WP"^^xsd:string) "in lampreys and teleost hormones enter the adenohypophysis by diffusion.") AnnotationAssertion( "One of the most important functions of the hypothalamus is to link the nervous system to the endocrine system via the pituitary gland (hypophysis). The hypothalamus is responsible for certain metabolic processes and other activities of the autonomic nervous system. It synthesizes and secretes certain neurohormones, often called hypothalamic-releasing hormones, and these in turn stimulate or inhibit the secretion of pituitary hormones. The hypothalamus controls body temperature, hunger, thirst, fatigue, sleep, and circadian cycles") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:70860") AnnotationAssertion( "MESH:A06.407.747.357") AnnotationAssertion( "NCIT:C32759") AnnotationAssertion(Annotation( "ncithesaurus:Hypothalamohypophyseal_Portal_System") "UMLS:C1512570") AnnotationAssertion(Annotation( ) "hypophyseal portal system") AnnotationAssertion(Annotation( "ISBN:0471888893"^^xsd:string) "hypothalamic hypophyseal portal system") AnnotationAssertion( "hypothalamohypophyseal portal system") AnnotationAssertion(Annotation( ) "venae portales hypophysiales") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "MESH:A06.407.747.357") "hypothalamo hypophyseal system") AnnotationAssertion(Annotation( "MESH:A06.407.747.357") "hypothalamo-hypophyseal system") AnnotationAssertion(Annotation( "FMA:70860") "portal veins of hypophysis") AnnotationAssertion(Annotation( "FMA:70860") "set of portal veins of hypophysis") AnnotationAssertion(Annotation( ) Annotation( ) "venae portales hypophysiales") AnnotationAssertion( "UBERON:0009976") AnnotationAssertion(rdfs:label "hypothalamo-hypophyseal system") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (natal tooth) AnnotationAssertion(Annotation( "MESH:A14.254.860.700.500") "Predeciduous teeth present at birth. They may be well formed and normal or may represent hornified epithelial structures without roots. They are found on the gingivae over the crest of the ridge and arise from accessory buds of the dental lamina ahead of the deciduous buds or from buds of the accessory dental lamina. (From Jablonski, Dictionary of Dentistry, 1992).") AnnotationAssertion( "GAID:1267") AnnotationAssertion( "MESH:A14.254.860.700.500") AnnotationAssertion(Annotation( "GAID:1267") Annotation( ) "natal teeth") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "GAID:1267") "natal tooth") AnnotationAssertion( "UBERON:0009977") AnnotationAssertion(rdfs:label "natal tooth") SubClassOf(Annotation( "GAID") ) # Class: (epicondyle) AnnotationAssertion( "epicondylar") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:75435") AnnotationAssertion( "NCIT:C69300") AnnotationAssertion(Annotation( "ncithesaurus:Epicondyle") "UMLS:C0222681") AnnotationAssertion( "galen:Epicondyle") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "epicondylus") AnnotationAssertion( "UBERON:0009978") AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "grouping class that collected the entepicondyles and epicondyles icondyles of humerus and femur") AnnotationAssertion(rdfs:label "epicondyle") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (condyle) AnnotationAssertion(Annotation( ) Annotation( "PHENOSCAPE:ad"^^xsd:string) "An articular prominence of a bone, typically present in pairs, resembling a pair of knuckles. Examples: Condyle of humerus, condyle of femur.") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0002259") Annotation( "TAO"^^xsd:string) Annotation( "TAO:wd"^^xsd:string) "Protuberance on a bone that participates in a joint with another bone.[TAO]") AnnotationAssertion(Annotation( ) "the round prominence at the end of a bone, most often part of a joint - an articulation with another bone[WP][Wikipedia:Condyle_(anatomy)].") AnnotationAssertion( "condylar") AnnotationAssertion( "condyloid") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:75434") AnnotationAssertion( "NCIT:C83002") AnnotationAssertion( "TAO:0002259") AnnotationAssertion(Annotation( "ncithesaurus:Condyle") "UMLS:C0524414") AnnotationAssertion( "galen:Condyle") AnnotationAssertion(Annotation( ) Annotation( ) "condylus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009979") AnnotationAssertion(rdfs:label "condyle") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (condyle of femur) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A condyle that is part of a distal epiphysis of femur.") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0000900") Annotation( "AAO"^^xsd:string) Annotation( "AAO:LAP"^^xsd:string) "Convex articular facet of the distal head of the femur that articulates with the proximal head of the fibula.[AAO]") AnnotationAssertion( ) AnnotationAssertion( "AAO:0000900") AnnotationAssertion( "FMA:32855") AnnotationAssertion( "NCIT:C114186") AnnotationAssertion( "galen:FemoralCondyle") AnnotationAssertion( "condylus femoralis") AnnotationAssertion( "condylus femoris") AnnotationAssertion( "femoral condyle") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "AAO:0000900") "fibular condyle") AnnotationAssertion( "UBERON:0009980") AnnotationAssertion(rdfs:label "condyle of femur") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (medial condyle of femur) AnnotationAssertion(Annotation( ) "The medial condyle is one of the two projections on the lower extremity of femur. The medial condyle is larger than the lateral (outer) condyle due to more weight bearing caused by the center of gravity being medial to the knee. On the posterior surface of the condyle the linea aspera (a ridge running down the posterior shaft of the femur) turns into the medial supracondylar ridge. The outermost protrusion on the medial surface of the medial condyle is referred to as the 'medial epicondyle' and can be palpated by running fingers medially from the patella with the knee in flexion.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:32858") AnnotationAssertion(Annotation( "FMA:32858") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "condylus medialis femoris") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "c. medialis femoris") AnnotationAssertion(Annotation( ) Annotation( ) "c. medialis femoris") AnnotationAssertion(Annotation( ) "medial condyle of the femur") AnnotationAssertion(Annotation( "FMA:32858") "medial femoral condyle") AnnotationAssertion( "UBERON:0009984") AnnotationAssertion(rdfs:label "medial condyle of femur") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/5/53/Gray246.png"^^xsd:anyURI) SubClassOf( ) DisjointClasses(Annotation( "lexical"^^xsd:string) ) # Class: (lateral condyle of femur) AnnotationAssertion(Annotation( ) "The lateral condyle is one of the two projections on the lower extremity of femur. It is the more prominent and is the broader both in its antero-posterior and transverse diameters.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:32859") AnnotationAssertion(Annotation( "FMA:32859") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "condylus lateralis femoris") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "c. lateralis femoris") AnnotationAssertion(Annotation( ) Annotation( ) "c. lateralis femoris") AnnotationAssertion(Annotation( ) "lateral condyle of the femur") AnnotationAssertion(Annotation( "FMA:32859") "lateral femoral condyle") AnnotationAssertion( "UBERON:0009985") AnnotationAssertion(rdfs:label "lateral condyle of femur") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/5/53/Gray246.png"^^xsd:anyURI) SubClassOf( ) # Class: (lateral epicondyle of femur) AnnotationAssertion(Annotation( ) "The lateral epicondyle of the femur, smaller and less prominent than the medial epicondyle, gives attachment to the fibular collateral ligament of the knee-joint. Directly below it is a small depression from which a smooth well-marked groove curves obliquely upward and backward to the posterior extremity of the condyle.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:32867") AnnotationAssertion( "galen:LateralFemoralEpicondyle") AnnotationAssertion(Annotation( "FMA:32867") "epicondylus lateralis (femur)") AnnotationAssertion(Annotation( "FMA:32867") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "epicondylus lateralis femoris") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "e. lateralis femoris") AnnotationAssertion(Annotation( ) "lateral femoral epicondyle") AnnotationAssertion( "UBERON:0009986") AnnotationAssertion(rdfs:label "lateral epicondyle of femur") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/5/53/Gray246.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) DisjointClasses(Annotation( "lexical"^^xsd:string) ) # Class: (medial epicondyle of femur) AnnotationAssertion(Annotation( ) "The medial epicondyle of the femur is a bony protrusion located on the medial side of the bone's distal end. Located above the medial condyle, it bears an elevation, the adductor tubercle, which serves for the attachment of the superficial part, or 'tendinous insertion', of the adductor magnus. This tendinous part here forms an intermuscular septum which forms the medial separation between the thigh's flexors and extensors. Behind it, and proximally to the medial condyle is a rough impression which gives origin to the medial head of the Gastrocnemius.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:32864") AnnotationAssertion( "galen:MedialFemoralEpicondyle") AnnotationAssertion(Annotation( "FMA:32864") "epicondylus medialis (femur)") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "epicondylus medialis femoris") AnnotationAssertion(Annotation( ) "medial femoral epicondyle") AnnotationAssertion( "UBERON:0009987") AnnotationAssertion(rdfs:label "medial epicondyle of femur") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/e/e0/Gray345.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (condyle of humerus) AnnotationAssertion(Annotation( ) "The distal end of the humerus, including the trochlea, capitulum and the olecranon, coronoid and radial fossae.") AnnotationAssertion( "As in the N.A., the Condylus humeri is the whole distal end of the bone except the epicondyles. The Capitulum humeri is present in Carnivora, more distinctly in the cat than in the dog. The Fossa coronoidea, present in the cat is medial to the Fossa radialis and accommodates the Processus coronoideus medialis ulnae when the elbow is flexed. A Foramen supratrochleare occurs in carnivora and occasionally in pig.[NOMINA ANATOMICA VETERINARIA (2005)]") AnnotationAssertion( ) AnnotationAssertion( "FMA:23377") AnnotationAssertion(Annotation( ) "condylus humeri") AnnotationAssertion(Annotation( "FMA:23377") "humeral condyle") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009988") AnnotationAssertion(rdfs:label "condyle of humerus") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (condyle of tibia) AnnotationAssertion(Annotation( ) "One of the lateral or medial condyles of the tibia.") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0000899") Annotation( "AAO"^^xsd:string) Annotation( "AAO:LAP"^^xsd:string) "Convex articular facet of the distal head of the femur that articulates with the proximal head of the tibia.[AAO]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0000899") AnnotationAssertion(Annotation( "AAO:0000899") "tibial condyle") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009989") AnnotationAssertion(rdfs:label "condyle of tibia") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (medial condyle of tibia) AnnotationAssertion(Annotation( ) "The medial condyle is the medial portion of the upper extremity of tibia. It is the site of insertion for the Semimembranosus muscle[WP].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:35445") AnnotationAssertion( "galen:MedialTibialCondyle") AnnotationAssertion(Annotation( "FMA:35445") "condylus medialis (tibia)") AnnotationAssertion(Annotation( "FMA:35445") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "condylus medialis tibiae") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "c. medialis tibiae") AnnotationAssertion(Annotation( ) "medial condyle of the tibia") AnnotationAssertion(Annotation( ) "medial tibial condyle") AnnotationAssertion( "UBERON:0009990") AnnotationAssertion(rdfs:label "medial condyle of tibia") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/8/8b/Gray257.png"^^xsd:anyURI) SubClassOf( ) DisjointClasses(Annotation( "lexical"^^xsd:string) ) # Class: (lateral condyle of tibia) AnnotationAssertion(Annotation( ) "The lateral condyle is the lateral portion of the upper extremity of tibia. It serves as the insertion for the Biceps femoris muscle[WP].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:35448") AnnotationAssertion(Annotation( "FMA:35448") "condylus lateralis (tibia)") AnnotationAssertion(Annotation( "FMA:35448") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "condylus lateralis tibiae") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "c. lateralis tibiae") AnnotationAssertion( "UBERON:0009991") AnnotationAssertion(rdfs:label "lateral condyle of tibia") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/8/8b/Gray257.png"^^xsd:anyURI) SubClassOf( ) # Class: (cranial sensory ganglion) AnnotationAssertion(Annotation( ) "The ganglion found on the root of each cranial nerve, containing the cell bodies of afferent (sensory) neurons.") AnnotationAssertion( "FMA:5887") AnnotationAssertion(Annotation( "FMA:5887") "cranial nerve sensory ganglion") AnnotationAssertion(Annotation( "FMA:5887") "ganglion sensorium cranialium") AnnotationAssertion(Annotation( "FMA:5887") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "ganglion sensorium nervi cranialis") AnnotationAssertion(Annotation( "FMA:5887") "sensory ganglion of cranial nerve") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009992") AnnotationAssertion(rdfs:comment "ontology notes: has no subtypes in FMA") AnnotationAssertion(rdfs:label "cranial sensory ganglion") SubClassOf(Annotation( "cjm"^^xsd:string) ) SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (primary chorionic villus) AnnotationAssertion(Annotation( ) "A chorionic villus that is a solid outgrowth of the cytotrophoblast that protrudes into the syncytiotrophoblast.") AnnotationAssertion( ) AnnotationAssertion( "NCIT:C34261") AnnotationAssertion(Annotation( "ncithesaurus:Primary_Chorionic_Villus") "UMLS:C1514421") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009993") AnnotationAssertion(rdfs:label "primary chorionic villus") SubClassOf(Annotation( "ncithesaurus"^^xsd:string) ) # Class: (secondary chorionic villus) AnnotationAssertion(Annotation( ) "A chorionic villus that is has a core of loose connective tissue, which in humans grows into the primary villi about the third week of development.") AnnotationAssertion( ) AnnotationAssertion( "NCIT:C34291") AnnotationAssertion(Annotation( "ncithesaurus:Secondary_Chorionic_Villus") "UMLS:C1519213") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009994") AnnotationAssertion(rdfs:label "secondary chorionic villus") SubClassOf(Annotation( "ncithesaurus"^^xsd:string) ) # Class: (tertiary chorionic villus) AnnotationAssertion(Annotation( ) "Tertiary chorionic villi contain embryonic blood vessels that develop from mesenchymal cells in the loose connective tissue core. These blood vessels connect up with vessels that develop in the chorion and connecting stalk and begin to circulate embryonic blood about the third week of development in humans.") AnnotationAssertion( ) AnnotationAssertion( "NCIT:C34310") AnnotationAssertion(Annotation( "ncithesaurus:Tertiary_Chorionic_Villus") "UMLS:C1515280") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0009995") AnnotationAssertion(rdfs:label "tertiary chorionic villus") SubClassOf(Annotation( "ncithesaurus"^^xsd:string) ) # Class: (multicellular anatomical structure) AnnotationAssertion(Annotation( "CARO:0010000") "An anatomical structure that has more than one cell as a part.") AnnotationAssertion( "CARO:0010000") AnnotationAssertion( "FBbt:00100313") AnnotationAssertion(Annotation( "FBbt:00100313") "multicellular structure") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010000") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "multicellular anatomical structure") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (cell cluster organ) AnnotationAssertion(Annotation( "CARO:0010001") "A small cluster of cells of various types which form a discrete structure, largely delimited by a morphological boundary and whose components work together to make the whole structure capable of a specific function.") AnnotationAssertion( "CARO:0010001") AnnotationAssertion( "FBbt:00007229") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010001") AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "Examples include arthropod sensilla.") AnnotationAssertion(rdfs:label "cell cluster organ") SubClassOf(Annotation( "CARO"^^xsd:string) ) SubClassOf(Annotation( "CARO"^^xsd:string) ) DisjointClasses(Annotation( "FBbt") ) DisjointClasses(Annotation( "CARO"^^xsd:string) ) # Class: (pulmonary neuroendocrine body) AnnotationAssertion(Annotation( "MP:0010921") "Corpuscular, organoid structures composed of PNECs, found as distinctive innervated clusters only within intrapulmonary airways, where they appear concentrated at airway branch points; NEBs reach from the basement membrane to the airway lumen and are thought to function as oxygen sensors.") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37943") AnnotationAssertion(Annotation( "MP:0010921") "NEB") AnnotationAssertion(Annotation( "MP:0010921") "pulmonary neuroepithelial body") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010002") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "pulmonary neuroendocrine body") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (placental cotyledon) AnnotationAssertion(Annotation( ) Annotation( ) "Round structure consisting of chorionic villi[PMID]. A separation of the decidua basalis of the placenta, separated by placental septa. Each cotyledon consists of a main stem of a chorionic villus as well as its branches and subbranches. The cotyledons receive fetal blood from chorionic vessels, which branch off cotyledon vessels into the cotyledons, which, in turn, branch into capillaries. The cotyledons are surrounded by maternal blood, which can exchange oxygen and nutrients with the fetal blood in the capillaries[WP].") AnnotationAssertion( "Rodents have a single cotyledon (called a discoid placenta), whereas humans have multiple cotyledons, although they are consolidated into a cluster that resembles a single disc[PMID:19829370]") AnnotationAssertion( "in ruminants, this is") AnnotationAssertion( "cotyledon") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "NCIT:C34135") AnnotationAssertion(Annotation( "ncithesaurus:Cotyledon") "UMLS:C0242769") AnnotationAssertion( "placenta cotyledon") AnnotationAssertion( "uberon") AnnotationAssertion( "discoid placenta") AnnotationAssertion( "UBERON:0010008") AnnotationAssertion(rdfs:label "placental cotyledon") AnnotationAssertion( "Placental:cotyledon.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (aggregate regional part of brain) AnnotationAssertion(Annotation( "NLXANAT:20090509") "A regional part of brain consisting of multiple brain regions that are not related through a simple volummetric part of hierarchy, e.g., basal ganglia[NIF].") AnnotationAssertion( "May be obsoleted.") AnnotationAssertion( "FMA:256381") AnnotationAssertion( "NLXANAT:20090509") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:256381") "set of nuclei of neuraxis") AnnotationAssertion( "UBERON:0010009") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "aggregate regional part of brain") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (basal nucleus of telencephalon) AnnotationAssertion(Annotation( "BTO:0001480") "A group of neurons in the basal forebrain that has wide projections to the neocortex and is rich in acetylcholine and choline acetyltransferase. It undergoes degeneration in paralysis agitans and Alzheimer's disease.") AnnotationAssertion(Annotation( "WP"^^xsd:string) "rich in acetylcholine and choline acetyltransferase") AnnotationAssertion(Annotation( "MA"^^xsd:string) "MA has basal nucleus as synonym for BG.") AnnotationAssertion( "The NBM is inferior to the globus pallidus and within an area known as the substantia innominata") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:MA") AnnotationAssertion( "BAMS:MCPO") AnnotationAssertion( "BIRNLEX:1107") AnnotationAssertion( "BTO:0001480") AnnotationAssertion( "DHBA:10353") AnnotationAssertion( "FMA:61887") AnnotationAssertion( "HBA:4308") AnnotationAssertion( "MESH:A08.186.211.730.885.105.880.100") AnnotationAssertion( "PBA:10141") AnnotationAssertion(Annotation( "BIRNLEX:1107") "UMLS:C0004788") AnnotationAssertion(Annotation( "BIRNLEX:1107") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=275") AnnotationAssertion(Annotation( "FMA:61887") "Meynert's nucleus") AnnotationAssertion(Annotation( "FMA:61887") "basal magnocellular nucleus (substantia innominata)") AnnotationAssertion(Annotation( "FMA:61887") "basal nuclei of Meynert") AnnotationAssertion(Annotation( "BIRNLEX:1107") "basal nucleus") AnnotationAssertion(Annotation( "FMA:61887") "basal nucleus of Meynert") AnnotationAssertion(Annotation( "FMA:61887") "basal substance of telencephalon") AnnotationAssertion(Annotation( "FMA:61887") "ganglion of Meynert") AnnotationAssertion(Annotation( "BIRNLEX:1107") "nucleus basalis") AnnotationAssertion(Annotation( "BIRNLEX:1107") "nucleus basalis of Meynert") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) Annotation( ) "substantia basalis telencephali") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:275") "basal forebrain nucleus") AnnotationAssertion(Annotation( "NeuroNames:275") "basal magnocellular nucleus") AnnotationAssertion(Annotation( "BAMS:B") "basal nucleus (Meynert)") AnnotationAssertion(Annotation( "NeuroNames:275") "magnocellular nucleus of the pallidum") AnnotationAssertion(Annotation( "NeuroNames:275") "magnocellular preoptic nucleus") AnnotationAssertion(Annotation( "NeuroNames:275") Annotation( ) "nucleus basalis (Meynert)") AnnotationAssertion(Annotation( "NeuroNames:275") Annotation( ) "nucleus basalis Meynert") AnnotationAssertion(Annotation( ) Annotation( ) "nucleus basalis telencephali") AnnotationAssertion(Annotation( "NeuroNames:275") "nucleus of the horizontal limb of the diagonal band (Price-Powell)") AnnotationAssertion( "UBERON:0010010") AnnotationAssertion(rdfs:label "basal nucleus of telencephalon") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/3/36/Substantia_innominata_MRI.PNG"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "WP"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (collection of basal ganglia) AnnotationAssertion(Annotation( "BIRNLEX:826") "Subcortical masses of gray matter in the forebrain and midbrain that are richly interconnected and so viewed as a functional system. The nuclei usually included are the caudate nucleus (caudoputamen in rodents), putamen, globus pallidus, substantia nigra (pars compacta and pars reticulata) and the subthalamic nucleus. Some also include the nucleus accumbens and ventral pallidum.") AnnotationAssertion( "it is necessary to introduce two classes, one representing an individual basal ganglion, another representing the aggregate structure, in order to have consistent classification amongst AOs (e.g. in MA the aygdala is part of the BG, in FMA and BTO it is a subclass). Apart from achieving this consistency, the value of having two distinct classes is questionable, since the BG-plural is trivially the collection of all BGs-singular. it would be better for all AOs to decide on one single way of doing this. Do not merge until this is done.") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001696") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "DOI:10.1016/j.cub.2011.05.001 Stephenson-Jones M, Samuelsson E, Ericsson J, Robertson B, Grillner S, Evolutionary conservation of the basal ganglia as a common vertebrate mechanism for action selection. Current Biology (2011)") "All nuclei of the mammalian basal ganglia are also present in the oldest vertebrates.[well established][VHOG]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:BG") AnnotationAssertion( "BIRNLEX:826") AnnotationAssertion( "BM:Tel-BG") AnnotationAssertion( "DHBA:10331") AnnotationAssertion( "EMAPA:32673") AnnotationAssertion( "FMA:84013") AnnotationAssertion( "GAID:617") AnnotationAssertion( "HBA:4275") AnnotationAssertion( "HBA:4276") AnnotationAssertion( "MA:0000184") AnnotationAssertion( "MBA:623") AnnotationAssertion( "MESH:A08.186.211.730.885.105") AnnotationAssertion( "NCIT:C12447") AnnotationAssertion( "PBA:128012596") AnnotationAssertion( "PBA:4001") AnnotationAssertion(Annotation( "ncithesaurus:Basal_Ganglia") "UMLS:C0004781") AnnotationAssertion( "VHOG:0001696") AnnotationAssertion(Annotation( "FMA:84013") "basal ganglia") AnnotationAssertion(Annotation( "FMA:84013") "basal ganglia set") AnnotationAssertion(Annotation( "PBA:BN") "basal nuclei (basal ganglia)") AnnotationAssertion(Annotation( "FMA:84013") "set of basal ganglia") AnnotationAssertion( "uberon") AnnotationAssertion( "basal nuclei") AnnotationAssertion(Annotation( "NeuroNames:2677") "cerebral nuclei") AnnotationAssertion(Annotation( "FMA:84013") "set of basal nuclei") AnnotationAssertion(Annotation( "NeuroNames:2677") "subcortical nuclei") AnnotationAssertion( "UBERON:0010011") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "collection of basal ganglia") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) SubClassOf(Annotation( "MA"^^xsd:string) Annotation( "NIF"^^xsd:string) ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) # Class: (spiral valve of cystic duct) AnnotationAssertion(Annotation( ) Annotation( ) "A series of crescentic folds of mucous membrane somewhat spirally arranged on the interior of the gallbladder and continuing into the cystic duct.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:15855") AnnotationAssertion(Annotation( "FMA:15855") "Heister's valve") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) Annotation( ) "plica spiralis") AnnotationAssertion(Annotation( "FMA:15855") "plica spiralis (ductus cysticus)") AnnotationAssertion(Annotation( "FMA:15855") "spiral fold of cystic duct") AnnotationAssertion( "valve of Heister") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010017") AnnotationAssertion(rdfs:label "spiral valve of cystic duct") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (tubotympanic recess epithelium) AnnotationAssertion(Annotation( "ISBN:0124020607") Annotation( "VHOG:0001297") "The dorsal portion of the embryonic first endodermal pharyngeal pouch; it develops into the middle ear cavity.") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001297") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0030223693 Liem KF, Bemis WE, Walker WF, Grande L, Functional Anatomy of the Vertebrates: An Evolutionary Perspective (2001) p.417") "The tympanic cavity and auditory tube of an amniote develop from the first embryonic pharyngeal pouch, so they are homologous to the first gill pouch, or spiracle, of a fish. We are uncertain whether this homology strictly applies to the middle ear cavity and auditory tube of lissamphibians, which show certain peculiarities in their development.[well established][VHOG]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0004115") AnnotationAssertion( "EHDAA:6772") AnnotationAssertion( "EMAPA:17002") AnnotationAssertion( "FMA:312393") AnnotationAssertion( "MA:0001218") AnnotationAssertion( "NCIT:C34318") AnnotationAssertion(Annotation( "ncithesaurus:Tubotympanic_Recess") "UMLS:C1284046") AnnotationAssertion( "VHOG:0001297") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "VHOG:0001297") "tubotympanic recess") AnnotationAssertion( "UBERON:0010020") AnnotationAssertion(rdfs:label "tubotympanic recess epithelium") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (dorsal part of pharyngeal pouch 1) AnnotationAssertion(Annotation( "ISBN:1607950324") "in humans, dorsal diverticulum deepens as the tubotympanic recess to form the auditory tube") AnnotationAssertion( "dorsal 1st branchial pouch") AnnotationAssertion( "dorsal pharyngeal pouch 1") AnnotationAssertion( "uberon") AnnotationAssertion( "dorsal branchial pouch 1 endoderm") AnnotationAssertion( "dorsal elongation of first pouch endoderm") AnnotationAssertion( "dorsal pharyngeal pouch 1 endoderm") AnnotationAssertion( "UBERON:0010021") AnnotationAssertion(rdfs:label "dorsal part of pharyngeal pouch 1") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (ventral part of pharyngeal pouch 1) AnnotationAssertion(Annotation( "ISBN:1607950324") "in humans, the ventral portion of pouches 1 and 2 are obliterated by the developing tongue") AnnotationAssertion( "ventral 1st branchial pouch") AnnotationAssertion( "ventral pharyngeal pouch 1") AnnotationAssertion( "uberon") AnnotationAssertion( "ventral branchial pouch 1 endoderm") AnnotationAssertion( "ventral elongation of first pouch endoderm") AnnotationAssertion( "ventral pharyngeal pouch 1 endoderm") AnnotationAssertion( "UBERON:0010022") AnnotationAssertion(rdfs:label "ventral part of pharyngeal pouch 1") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (dorsal part of pharyngeal pouch 2) AnnotationAssertion(Annotation( "MP"^^xsd:string) "in humans, persists as the tonsillar fossa - the endodermal lining covers the mesodermal lymphatic tissue to form the palatine tonsil[ISBN:1607950324]. the dorsal elongation of the second pouch endoderm of all mammals, with the exception of rodents, gives rise to the epithelial lining of palatine tonsils; in rodents, the ventral portion of the second pouch appears to degenerate whereas the remaining part is incorporated into the lateral border of the pharynx; it appears that rodents no longer require tonsils as their function is carried out by the NALT (Nose/Nasal-Associated Lymphoid Tissue) system in the upper respiratory tract") AnnotationAssertion( "dorsal 2nd branchial pouch") AnnotationAssertion( "dorsal pharyngeal pouch 2") AnnotationAssertion( "uberon") AnnotationAssertion( "dorsal branchial pouch 2 endoderm") AnnotationAssertion( "dorsal elongation of second pouch endoderm") AnnotationAssertion( "dorsal pharyngeal pouch 2 endoderm") AnnotationAssertion( "UBERON:0010023") AnnotationAssertion(rdfs:label "dorsal part of pharyngeal pouch 2") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (ventral part of pharyngeal pouch 2) AnnotationAssertion(Annotation( "ISBN:1607950324") "in humans, the ventral portion of pouches 1 and 2 are obliterated by the developing tongue") AnnotationAssertion( "ventral 2nd branchial pouch") AnnotationAssertion( "ventral pharyngeal pouch 2") AnnotationAssertion( "uberon") AnnotationAssertion( "ventral branchial pouch 2 endoderm") AnnotationAssertion( "ventral elongation of second pouch endoderm") AnnotationAssertion( "ventral pharyngeal pouch 2 endoderm") AnnotationAssertion( "UBERON:0010024") AnnotationAssertion(rdfs:label "ventral part of pharyngeal pouch 2") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (dorsal part of pharyngeal pouch 3) AnnotationAssertion(Annotation( "MP"^^xsd:string) "Derivatives of the dorsal wings include the inferior parathyroid glands[WP] in mammals, the cranial dorsal aspect of the third pouch generates the inferior parathyroids (or parathyroid III)") AnnotationAssertion( "EHDAA2:0000409") AnnotationAssertion( "EMAPA:16758") AnnotationAssertion(Annotation( "EHDAA2:0000409") "dorsal 3rd arch pharyngeal pouch endoderm") AnnotationAssertion( "dorsal 3rd branchial pouch") AnnotationAssertion( "dorsal pharyngeal pouch 3") AnnotationAssertion(Annotation( ) "dorsal wing of pharyngeal pouch 3") AnnotationAssertion( "uberon") AnnotationAssertion( "cranial dorsal aspect of third dorsal pharyngeal pouch") AnnotationAssertion( "dorsal branchial pouch 3 endoderm") AnnotationAssertion( "dorsal pharyngeal pouch 3 endoderm") AnnotationAssertion( "UBERON:0010025") AnnotationAssertion(rdfs:label "dorsal part of pharyngeal pouch 3") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (ventral part of pharyngeal pouch 3) AnnotationAssertion(Annotation( "MP"^^xsd:string) "The ventral wings fuse to form the cytoreticular cells of the thymus[WP] the caudal ventral part of the pouch gives rise to the thymus epithelium") AnnotationAssertion( "EHDAA2:0002173") AnnotationAssertion( "EMAPA:16759") AnnotationAssertion(Annotation( "EHDAA2:0002173") "ventral 3rd arch pharyngeal pouch endoderm") AnnotationAssertion( "ventral 3rd branchial pouch") AnnotationAssertion( "ventral pharyngeal pouch 3") AnnotationAssertion(Annotation( ) "ventral wing of pharyngeal pouch 3") AnnotationAssertion( "uberon") AnnotationAssertion( "caudal ventral aspect of third dorsal pharyngeal pouch") AnnotationAssertion( "ventral branchial pouch 3 endoderm") AnnotationAssertion( "ventral pharyngeal pouch 3 endoderm") AnnotationAssertion( "UBERON:0010026") AnnotationAssertion(rdfs:label "ventral part of pharyngeal pouch 3") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (dorsal part of pharyngeal pouch 4) AnnotationAssertion( "dorsal 4th branchial pouch") AnnotationAssertion( "dorsal pharyngeal pouch 4") AnnotationAssertion( "uberon") AnnotationAssertion( "dorsal branchial pouch 4 endoderm") AnnotationAssertion( "dorsal pharyngeal pouch 4 endoderm") AnnotationAssertion( "UBERON:0010027") AnnotationAssertion(rdfs:label "dorsal part of pharyngeal pouch 4") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (ventral part of pharyngeal pouch 4) AnnotationAssertion( "ventral 4th branchial pouch") AnnotationAssertion( "ventral pharyngeal pouch 4") AnnotationAssertion( "uberon") AnnotationAssertion( "ventral branchial pouch 4 endoderm") AnnotationAssertion( "ventral pharyngeal pouch 4 endoderm") AnnotationAssertion( "UBERON:0010028") AnnotationAssertion(rdfs:label "ventral part of pharyngeal pouch 4") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (dorsal part of pharyngeal pouch 5) AnnotationAssertion( "dorsal 5th branchial pouch") AnnotationAssertion( "dorsal pharyngeal pouch 5") AnnotationAssertion( "uberon") AnnotationAssertion( "dorsal branchial pouch 5 endoderm") AnnotationAssertion( "dorsal pharyngeal pouch 5 endoderm") AnnotationAssertion( "UBERON:0010029") AnnotationAssertion(rdfs:label "dorsal part of pharyngeal pouch 5") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (ventral part of pharyngeal pouch 5) AnnotationAssertion( "ventral 5th branchial pouch") AnnotationAssertion( "ventral pharyngeal pouch 5") AnnotationAssertion( "uberon") AnnotationAssertion( "ventral branchial pouch 5 endoderm") AnnotationAssertion( "ventral pharyngeal pouch 5 endoderm") AnnotationAssertion( "UBERON:0010030") AnnotationAssertion(rdfs:label "ventral part of pharyngeal pouch 5") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (6th arch mesenchyme) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "Mesenchyme that is part of a pharyngeal arch 6.") AnnotationAssertion( "EHDAA2:0004076") AnnotationAssertion( "EMAPA:32765") AnnotationAssertion( "FMA:318209") AnnotationAssertion( "6th pharyngeal arch mesenchyme") AnnotationAssertion( "uberon") AnnotationAssertion( "6th branchial arch mesenchyme") AnnotationAssertion( "pharyngeal arch 6 mesenchyme") AnnotationAssertion( "UBERON:0010031") AnnotationAssertion(rdfs:label "6th arch mesenchyme") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (anterior part of tongue) AnnotationAssertion(Annotation( ) "The portion of the tongue in front of the terminal sulcus. At the apex, thin and narrow, it is directed forward against the lingual surfaces of the lower incisor teeth. It is derived primarily from the first pharyngeal arch.") AnnotationAssertion( "The lateral lingual swellings grow and fuse with eachother, encompassing the tuberculum impar to provide the ectodermally derived mucosa of the anterior 2/3 of the tongue") AnnotationAssertion(Annotation( "NCIT") "check NCIT") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37437") AnnotationAssertion( "FMA:229084") AnnotationAssertion( "NCIT:C32130") AnnotationAssertion(Annotation( "ncithesaurus:Apex_of_the_Tongue") "UMLS:C0226946") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "anterior 2/3 of the tongue") AnnotationAssertion(Annotation( ) "anterior 2/3 of tongue") AnnotationAssertion(Annotation( ) "anterior two thirds of the tongue") AnnotationAssertion(Annotation( ) "apex linguae") AnnotationAssertion(Annotation( ) "apex of the tongue") AnnotationAssertion(Annotation( ) "buccal part of the tongue") AnnotationAssertion(Annotation( ) "front of the tongue") AnnotationAssertion(Annotation( ) "oral part of the tongue") AnnotationAssertion(Annotation( ) Annotation( ) "pars anterior dorsi linguae") AnnotationAssertion( "UBERON:0010032") AnnotationAssertion(rdfs:label "anterior part of tongue") AnnotationAssertion( "Illu04:tongue.jpg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses(Annotation( "lexical"^^xsd:string) ) # Class: (posterior part of tongue) AnnotationAssertion(Annotation( ) "The Posterior tongue, or pharyngeal part, is the part of the tongue behind the terminal sulcus. At its root, it is directed backward, and connected with the hyoid bone by the Hyoglossi and Genioglossi muscles and the hyoglossal membrane; with the epiglottis by three folds (glossoepiglottic) of mucous membrane; with the soft palate by the glossopalatine arches; and with the pharynx by the Constrictores pharyngis superiores and the mucous membrane. It is derived primarily from the third pharyngeal arch. (The second arch has a substantial contribution during fetal development, but this later atrophies. The fourth arch may also contribute, depending upon how the boundaries of the tongue are defined.).") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37438") AnnotationAssertion( "FMA:54645") AnnotationAssertion( "MA:0003031") AnnotationAssertion( "NCIT:C12228") AnnotationAssertion(Annotation( "ncithesaurus:Base_of_the_Tongue") "UMLS:C0226958") AnnotationAssertion(Annotation( ) "base of tongue") AnnotationAssertion(Annotation( "FMA:54645") "pars posterior (dorsum linguae)") AnnotationAssertion(Annotation( ) Annotation( ) "pars posterior dorsi linguae") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) Annotation( ) "pars posterior linguae") AnnotationAssertion(Annotation( "FMA:54645") "pars postsulcalis (dorsum linguae)") AnnotationAssertion(Annotation( "FMA:54645") "pharyngeal part of tongue") AnnotationAssertion(Annotation( "FMA:54645") "pharyngeal portion of dorsum of tongue") AnnotationAssertion(Annotation( "FMA:54645") "posterior part of dorsum of tongue") AnnotationAssertion(Annotation( "FMA:54645") "postsulcal part of dorsum of tongue") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "base of the tongue") AnnotationAssertion(Annotation( ) "pharyngeal part of the tongue") AnnotationAssertion(Annotation( ) "posterior 1/3 of the tongue") AnnotationAssertion(Annotation( ) "posterior third of tongue") AnnotationAssertion(Annotation( ) "radix linguae") AnnotationAssertion( "UBERON:0010033") AnnotationAssertion(rdfs:label "posterior part of tongue") AnnotationAssertion( "Illu04:tongue.jpg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "Wikipedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (copula linguae) AnnotationAssertion(Annotation( ) "A single midventral prominence deriving from the ventral bases of pharyngeal arches 2, 3 and 4 - provides the covering of the posterior of the tongue //The furcula is at first separated from the tuberculum impar by a depression, but later by a ridge, the copula, formed by the forward growth and fusion of the ventral ends of the second, third, and part of the fourth branchial arches[WP].") AnnotationAssertion( "add new term for Hypobranchial_eminence?") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0004611") AnnotationAssertion(Annotation( "EHDAA2:0004611") "copula") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "copula linguae") AnnotationAssertion( "UBERON:0010034") AnnotationAssertion(rdfs:label "copula linguae") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/8/85/Gray980.png"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ) SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (fundic gastric gland) AnnotationAssertion(Annotation( ) "The fundus glands (or fundic glands, or gastric glands) are found in the body and fundus of the stomach. They are simple tubes, two or more of which open into a single duct.") AnnotationAssertion( "Consider FMA:14923 ! Principal gland of fundus of stomach. Added part_of to mucosa to be consistent with FMA pattern (note that Kardong places this in the glandular epithelium)") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:27161") AnnotationAssertion( "NCIT:C32643") AnnotationAssertion(Annotation( "ncithesaurus:Fundic_Gland") "UMLS:C0017130") AnnotationAssertion( "fundal gland") AnnotationAssertion( "fundus gland") AnnotationAssertion( "gastric fundal gland") AnnotationAssertion( "gastric fundus gland") AnnotationAssertion( "gastric gland of fundus of stomach") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "glandulae gastricae") AnnotationAssertion( "UBERON:0010038") AnnotationAssertion(rdfs:label "fundic gastric gland") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/d/d7/Fundic_gland_polyp_%281%29.jpg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "ISBN:0073040584"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "ISBN:0073040584"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (food storage organ) AnnotationAssertion(Annotation( ) "An organ of the digestive tract that is capable of retaining and storing food.") AnnotationAssertion( "This is a very broad functionally defined grouping class that collects disparate structures from insects to vertebrates") AnnotationAssertion( "BSA:0000123") AnnotationAssertion( "TADS:0000172") AnnotationAssertion( "TGMA:0001041") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010039") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "food storage organ") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (stomach non-glandular epithelium) AnnotationAssertion(Annotation( "ISBN:0073040584"^^xsd:string) "Am epithelium that lines the stomach which lacks glands. In addition to a glandular epithelium, the stomachs of some vertebrates also has a second region characterized by a nonglandular epithelium, devoid of gastric glands.") AnnotationAssertion( "OWL definition to be added later") AnnotationAssertion( "todo - clarify if mucus glands are also excluded, in addition to gastric glands. See notes for rumen.") AnnotationAssertion( "this region may develop from the base of the esophagus (some herbivores) - in rodents, loss of the gastric glands in the mucosa leavea a nonglandular epithelial stomach in which smooth muscle contractions knead and mix digesta. This can be keratinized.") AnnotationAssertion( "stomach aglandular epithelium") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "ISBN:0123813611"^^xsd:string) "stomach squamous epithelium") AnnotationAssertion( "UBERON:0010040") AnnotationAssertion(rdfs:label "stomach non-glandular epithelium") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/b/b9/Mammalian_Stomachs_remake.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) # Class: (median ovary) AnnotationAssertion(Annotation( ) "In the primitive jawless fish, and some teleosts, there is only one ovary, formed by the fusion of the paired organs in the embryo") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010041") AnnotationAssertion(rdfs:label "median ovary") SubClassOf( ) # Class: (1st arch mesenchyme) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "Mesenchyme that is part of a pharyngeal arch 1.") AnnotationAssertion( "EMAPA:16128") AnnotationAssertion(Annotation( "EMAPA:16128") "mesenchyme of 1st arch") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010042") AnnotationAssertion(rdfs:label "1st arch mesenchyme") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (1st arch maxillary mesenchyme) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "Mesenchyme that is part of a 1st arch maxillary component.") AnnotationAssertion( "EHDAA2:0000041") AnnotationAssertion( "EMAPA:16391") AnnotationAssertion(Annotation( "EMAPA:16391") "mesenchyme of maxillary component") AnnotationAssertion( "uberon") AnnotationAssertion( "maxillary component mesenchyme") AnnotationAssertion( "maxillary mesenchyme") AnnotationAssertion( "UBERON:0010045") AnnotationAssertion(rdfs:label "1st arch maxillary mesenchyme") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (entire pharyngeal arch associated mesenchyme) AnnotationAssertion(Annotation( ) Annotation( "XAO:0004524") "The sum total of mesenchymal tissue in the pharyngeal arch region. Pharyngeal mesenchyme is undifferentiated, loose connective tissue derived mostly from mesoderm, and also contains ectodermally derived neural crest cells.") AnnotationAssertion( "EHDAA2:0001459") AnnotationAssertion( "EMAPA:16550") AnnotationAssertion( "XAO:0004524") AnnotationAssertion(Annotation( "EMAPA:16550") "associated mesenchyme of pharyngeal region") AnnotationAssertion(Annotation( ) "entire branchial arch associated mesenchyme") AnnotationAssertion(Annotation( "EHDAA2:0001459") "pharyngeal arch associated mesenchyme") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010046") AnnotationAssertion(rdfs:label "entire pharyngeal arch associated mesenchyme") SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ) SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "cjm"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (oral gland) AnnotationAssertion(Annotation( "ISBN:0073040584"^^xsd:string) "Gland of the epithelium lining the oral cavity. The most common are the salivary glands.") AnnotationAssertion(Annotation( "EHDAA2"^^xsd:string) "Note that Kardong classifies lacrimal glands here. EHDAA2 includes pituitary primordium, as this develops from oral mucosa") AnnotationAssertion( "UBERON:0003293") AnnotationAssertion( "EHDAA2:0001327") AnnotationAssertion( "EHDAA:2181") AnnotationAssertion( "EMAPA:16572") AnnotationAssertion( "EMAPA:16723") AnnotationAssertion( "VHOG:0000652") AnnotationAssertion( "buccal gland") AnnotationAssertion( "uberon") AnnotationAssertion( "gland of oral opening") AnnotationAssertion( "gland of oral region") AnnotationAssertion( "mouth gland") AnnotationAssertion( "oral cavity gland") AnnotationAssertion( "oral region gland") AnnotationAssertion( "UBERON:0010047") AnnotationAssertion(rdfs:label "oral gland") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (mucosa of dorsum of tongue) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A mucosa that is part of a dorsum of tongue.") AnnotationAssertion( "check surface terms") AnnotationAssertion( "develops fungiform papillae by WNT induction at 11 weeks pc in human. Filiform papillae develop later. ISBN:1607950324") AnnotationAssertion( ) AnnotationAssertion( "FMA:74871") AnnotationAssertion( "mucosa of dorsal surface of tongue") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010052") AnnotationAssertion(rdfs:label "mucosa of dorsum of tongue") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (echolocation organ) AnnotationAssertion(Annotation( ) "Any organ that plays a role in the process of echolocation.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010053") AnnotationAssertion(rdfs:label "echolocation organ") SubClassOf( ) # Class: (malleus cartilage element) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A malleus endochondral element that is composed primarily of cartilage tissue.") AnnotationAssertion( "EMAPA:18229") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010054") AnnotationAssertion(rdfs:label "malleus cartilage element") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (stapes cartilage element) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A stapes endochondral element that is composed primarily of cartilage tissue.") AnnotationAssertion( "TODO - check relationship to Recihert's") AnnotationAssertion( "The stapes is homologous to the hyomandibula. In this ontology, we use the class 'hyomandibular cartilage' generally to include the future stapes, the future hyomandibular bone of teleosts and the unossified cartilage in sharks.") AnnotationAssertion( "EMAPA:18230") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010055") AnnotationAssertion(rdfs:label "stapes cartilage element") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (future tongue) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A compound organ that has the potential to develop into a tongue.") AnnotationAssertion( "EHDAA2:0000696") AnnotationAssertion( "EHDAA:2951") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010056") AnnotationAssertion(rdfs:label "future tongue") SubClassOf(Annotation( "EHDAA2"^^xsd:string) ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (hypopharyngeal eminence) AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0000799") AnnotationAssertion( "EMAPA:17352") AnnotationAssertion(Annotation( "EMAPA:17352") Annotation( "OBOL:automatic"^^xsd:string) "hypobranchial eminence") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010057") AnnotationAssertion(rdfs:label "hypopharyngeal eminence") SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (hypoglossal cord) AnnotationAssertion( "EHDAA2:0004610") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010059") AnnotationAssertion(rdfs:label "hypoglossal cord") SubClassOf(Annotation( "EHDAA2"^^xsd:string) ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (pharyngeal opening of pharyngotympanic tube) AnnotationAssertion(Annotation( ) "On the lateral wall of the nasal part of the pharynx is the pharyngeal opening of auditory tube (pharyngeal ostium), somewhat triangular in shape, and bounded behind by a firm prominence, the torus or cushion, caused by the medial end of the cartilage of the tube which elevates the mucous membrane.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:54979") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) Annotation( ) "ostium pharyngeum tubae auditivae") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) Annotation( ) "ostium pharyngeum tubae auditoriae") AnnotationAssertion(Annotation( "FMA:54979") "pharyngeal opening of auditory tube") AnnotationAssertion(Annotation( "FMA:54979") "pharyngeal opening of eustachian tube") AnnotationAssertion(Annotation( "FMA:54979") "pharyngeal orifice of auditory tube") AnnotationAssertion(Annotation( "FMA:54979") "pharyngeal orifice of eustachian tube") AnnotationAssertion(Annotation( "FMA:54979") "pharyngeal orifice of pharyngotympanic tube") AnnotationAssertion(Annotation( "FMA:54979") "pharyngeal ostium of auditory tube") AnnotationAssertion(Annotation( "FMA:54979") "pharyngeal ostium of eustachian tube") AnnotationAssertion(Annotation( "FMA:54979") "pharyngeal ostium of pharyngotympanic tube") AnnotationAssertion(Annotation( "FMA:54979") "pharyngeal tubal ostium") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "ostium pharyngeum tubae auditivae") AnnotationAssertion(Annotation( ) "pharyngeal ostium") AnnotationAssertion( "UBERON:0010060") AnnotationAssertion(rdfs:label "pharyngeal opening of pharyngotympanic tube") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/1/1b/Gray1029.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lumen of nasopharynx) AnnotationAssertion( "FMA:55094") AnnotationAssertion( "nasopharyngeal luman") AnnotationAssertion( "nasopharynx cavity") AnnotationAssertion(Annotation( "FMA:55094") "nasopharynx lumen") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010061") AnnotationAssertion(rdfs:label "lumen of nasopharynx") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pharyngotympanic tube epithelium) AnnotationAssertion( "EHDAA2:0004117") AnnotationAssertion( "EMAPA:32801") AnnotationAssertion( "FMA:285217") AnnotationAssertion( "MA:0003142") AnnotationAssertion(Annotation( "EHDAA2:0004117") "auditory tube epithelium") AnnotationAssertion(Annotation( ) "eustachian tube epithelium") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010062") AnnotationAssertion(rdfs:label "pharyngotympanic tube epithelium") SubClassOf(Annotation( "EHDAA2"^^xsd:string) ) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "cjm"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (tympanic cavity epithelium) AnnotationAssertion( "EHDAA2:0004116") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010063") AnnotationAssertion(rdfs:label "tympanic cavity epithelium") SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (open anatomical space) AnnotationAssertion(Annotation( "AEO:0000221") "An anatomical space with at least one opening to another space or the exterior.") AnnotationAssertion( "AEO:0000221") AnnotationAssertion( "EHDAA2:0004616") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010064") AnnotationAssertion(rdfs:label "open anatomical space") SubClassOf( ) SubClassOf(Annotation( "cjm"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (auditory meatus epithelium) AnnotationAssertion( "EHDAA2:0004114") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010065") AnnotationAssertion(rdfs:label "auditory meatus epithelium") SubClassOf(Annotation( "EHDAA2"^^xsd:string) ) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (tympanic plate) AnnotationAssertion(Annotation( ) "The tympanic part of the temporal bone is a curved plate of bone lying below the squama and in front of the mastoid process.") AnnotationAssertion( "TODO distinguish ecto- and ento- tympanics") AnnotationAssertion( "consider merging with tympanic ring. See discussion page on wikipedia page for ectotympanic") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:52880") AnnotationAssertion(Annotation( "FMA:52880") "pars tympanica (os temporale)") AnnotationAssertion(Annotation( "FMA:52880") "tympanic part of temporal bone") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "ectotympanic") AnnotationAssertion(Annotation( ) "ectotympanic bone") AnnotationAssertion(Annotation( ) "pars tympanica") AnnotationAssertion(Annotation( ) Annotation( ) "pars tympanica ossis temporalis") AnnotationAssertion(Annotation( ) "tympanic bone") AnnotationAssertion(Annotation( ) "tympanic part") AnnotationAssertion( "UBERON:0010066") AnnotationAssertion(rdfs:label "tympanic plate") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/9/96/Gray137.png"^^xsd:anyURI) SubClassOf(Annotation( "cjm"^^xsd:string) ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (outer epithelial layer of tympanic membrane) AnnotationAssertion(Annotation( ) Annotation( ) "A portion of the external acoustic meatus epithelium which makes up the outer (cuticular) layer of the tympanic membrane.") AnnotationAssertion( ) AnnotationAssertion( "FMA:56819") AnnotationAssertion(Annotation( "FMA:56819") "cuticular layer of tympanic membrane") AnnotationAssertion(Annotation( "FMA:56819") "cuticular stratum of tympanic membrane") AnnotationAssertion(Annotation( "FMA:56819") "outer cuticular layer of tympanic membrane") AnnotationAssertion( "outer layer of tympanic membrane") AnnotationAssertion(Annotation( ) "tympanic membrane external acoustic meatus epithelial component") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010069") AnnotationAssertion(rdfs:label "outer epithelial layer of tympanic membrane") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (intermediate layer of tympanic membrane) AnnotationAssertion(Annotation( ) Annotation( ) "The intermediate fibrous layer of the tympanic membrane.") AnnotationAssertion(Annotation( "MA"^^xsd:string) "check MA") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:19063") AnnotationAssertion( "FMA:56830") AnnotationAssertion( "MA:0001223") AnnotationAssertion(Annotation( "FMA:56830") "connective tissue layer of tympanic membrane") AnnotationAssertion(Annotation( "FMA:56830") "fibrous layer of tympanic membrane") AnnotationAssertion(Annotation( "FMA:56830") "fibrous stratum of tympanic membrane") AnnotationAssertion(Annotation( "FMA:56830") "intermediate fibrous layer of tympanic membrane") AnnotationAssertion(Annotation( "MA:0001223") "tympanic endothelium") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010070") AnnotationAssertion(rdfs:label "intermediate layer of tympanic membrane") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (layer of tympanic membrane) AnnotationAssertion( "In mammals, this class groups together the two epithelial layers plus the intermediate fibrous layer") AnnotationAssertion( "FMA:56732") AnnotationAssertion(Annotation( "FMA:56732") "tympanic membrane layer") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010071") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "layer of tympanic membrane") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (chromaffin system) AnnotationAssertion(Annotation( ) "Organ system subdivision that consists primarily of chromaffin cells and their supporting structures.") AnnotationAssertion( "in adult cylostomes and teleosts, the interrenal bodies are separate from chromaffin bodies") AnnotationAssertion( "FMA:79645") AnnotationAssertion( "MESH:D002838") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "MESH:A06.224") "argentaffin system") AnnotationAssertion( "chromaffin tissue") AnnotationAssertion( "UBERON:0010074") AnnotationAssertion(rdfs:label "chromaffin system") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "cjm"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (sacral neural crest) AnnotationAssertion(Annotation( ) Annotation( "XB:curator") "One of the 5 distinct and partially overlapping functional domains of the premigratory neural crest. The vagal and sacral neural crest cells develop into the ganglia of the enteric nervous system, also known as the parasympathetic ganglia.") AnnotationAssertion( "XAO:0004192") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010075") AnnotationAssertion(rdfs:label "sacral neural crest") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (network of trabecular spaces in bone tissue) AnnotationAssertion(Annotation( "FMA:259332") "Tissue cavity consisting of intercommunicating trabecular spaces in the cancellous bone.") AnnotationAssertion( "FMA:259332") AnnotationAssertion(Annotation( "FMA:259332") "trabecular network of bone tissue") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:259332") "trabecular space network") AnnotationAssertion( "UBERON:0010076") AnnotationAssertion(rdfs:label "network of trabecular spaces in bone tissue") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (cuboidal epithelium) AnnotationAssertion(Annotation( ) "An epithelium consisting of cuboidal epithelial cells.") AnnotationAssertion( "TODO - coordinate with CL, add cuboidal cell") AnnotationAssertion(Annotation( "NCIT") "in NCIT this is glandular") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "NCIT:C32415") AnnotationAssertion(Annotation( "ncithesaurus:Cuboidal_Epithelium") "UMLS:C0682577") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010077") AnnotationAssertion(rdfs:label "cuboidal epithelium") SubClassOf( ) # Class: (optic choroid vascular plexus) AnnotationAssertion( "Consider merging with capillary layer. Consider choriocapillaris complex") AnnotationAssertion(Annotation( "XAO:0004176") "A plexus of capillaries that is located anteromedial to the eye. It is a capillary layer in the choroid. It is in contact with the basal surface of the retinal pigmented epithelium and supplies the photoreceptors with oxygen and nutrients. The fused basement membrane of this capillary layer and the pigmented epithelium is called Bruchs's membrane.[XAO:0004176].") AnnotationAssertion(Annotation( "ZFA:0005094") "Is an ocular vasculature that develops adjacent to the pigment epithelium of the eye. The optic choroid vascular plexus develops from the primitive mesencephalic artery. Initially blood enters from the mesencephalic central artery, and the dorsal ciliary vein. The plexus drains via the ophthalmic vein. The plexus supplies blood to the retina[ZFA:0005094].") AnnotationAssertion(Annotation( ) "The choroid of teleosts is a connective tissue layer rich in blood vessels, and one or two choroidal glands.") AnnotationAssertion( "ZFA:0005228") AnnotationAssertion( "TAO:0005094") AnnotationAssertion( "XAO:0004176") AnnotationAssertion( "ZFA:0005094") AnnotationAssertion(Annotation( "ZFA:0005094") Annotation( ) "CVP") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "XAO:0004176") "capillary lamina of choroid") AnnotationAssertion(Annotation( "XAO:0004176") "choriocapillaris") AnnotationAssertion( "choroid vascular plexus") AnnotationAssertion(Annotation( "ZFA:0005094") "choroid vasculature") AnnotationAssertion(Annotation( "TAO:0005094") "choroidal vascular plexus") AnnotationAssertion(Annotation( "XAO:0004176") "optic choroid vascular plexus") AnnotationAssertion( "UBERON:0010078") AnnotationAssertion(rdfs:label "optic choroid vascular plexus") SubClassOf(Annotation( "ZFA"^^xsd:string) ) SubClassOf(Annotation( "XAO"^^xsd:string) ) SubClassOf(Annotation( "ZFA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (future common hepatic duct) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An extrahepatic bile duct that has the potential to develop into a common hepatic duct.") AnnotationAssertion( "EHDAA2:0000595") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010081") AnnotationAssertion(rdfs:label "future common hepatic duct") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (future dermis) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "Mesenchyme that has the potential to develop into a dermis.") AnnotationAssertion( "check development") AnnotationAssertion( "EHDAA2:0000598") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010083") AnnotationAssertion(rdfs:label "future dermis") SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "XAO"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (future diaphragm) AnnotationAssertion(Annotation( ) "A structure that will develop into a diaphragm.") AnnotationAssertion( "EHDAA2:0000599") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010084") AnnotationAssertion(rdfs:label "future diaphragm") SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (future falx cerebri) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A developing anatomical structure that has the potential to develop into a falx cerebri.") AnnotationAssertion( "EHDAA2:0000608") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010090") AnnotationAssertion(rdfs:label "future falx cerebri") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (future hindbrain meninx) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A multi-tissue structure that has the potential to develop into a meninx of hindbrain.") AnnotationAssertion( "EHDAA2:0000610") AnnotationAssertion(Annotation( "EHDAA2:0000610") "future hindbrain meninges") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010091") AnnotationAssertion(rdfs:label "future hindbrain meninx") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (future metencephalon) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A developing anatomical structure that has the potential to develop into a metencephalon.") AnnotationAssertion( "EHDAA2:0000623") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010092") AnnotationAssertion(rdfs:label "future metencephalon") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (future myelencephalon) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A developing anatomical structure that has the potential to develop into a myelencephalon.") AnnotationAssertion( "EHDAA2:0000640") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010096") AnnotationAssertion(rdfs:label "future myelencephalon") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (future facial nucleus) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A gray matter that has the potential to develop into a facial nucleus.") AnnotationAssertion( "EHDAA2:0004639") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010123") AnnotationAssertion(rdfs:label "future facial nucleus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (future inferior salivatory nucleus) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A gray matter that has the potential to develop into a inferior salivatory nucleus.") AnnotationAssertion( "TODO - devfrom") AnnotationAssertion( "EHDAA2:0004643") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010124") AnnotationAssertion(rdfs:label "future inferior salivatory nucleus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (future superior salivatory nucleus) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A gray matter that has the potential to develop into a superior salivatory nucleus.") AnnotationAssertion( "EHDAA2:0004644") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010125") AnnotationAssertion(rdfs:label "future superior salivatory nucleus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (future nucleus ambiguus) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A gray matter that has the potential to develop into a nucleus ambiguus.") AnnotationAssertion( "EHDAA2:0004647") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010126") AnnotationAssertion(rdfs:label "future nucleus ambiguus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (future dorsal motor nucleus of vagus) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A gray matter that has the potential to develop into a dorsal motor nucleus of vagus nerve.") AnnotationAssertion( "EHDAA2:0004650") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010127") AnnotationAssertion(rdfs:label "future dorsal motor nucleus of vagus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (future pterygopalatine ganglion) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A ganglion that has the potential to develop into a pterygopalatine ganglion.") AnnotationAssertion( "EHDAA2:0000673") AnnotationAssertion(Annotation( "MP:0008314") Annotation( "OBOL:automatic"^^xsd:string) "future Meckel ganglion") AnnotationAssertion(Annotation( "FMA:6965") Annotation( "OBOL:automatic"^^xsd:string) "future Meckel's ganglion") AnnotationAssertion(Annotation( "MP:0008314") Annotation( "OBOL:automatic"^^xsd:string) "future nasal ganglion") AnnotationAssertion(Annotation( "MP:0008314") Annotation( "OBOL:automatic"^^xsd:string) "future palatine ganglion") AnnotationAssertion(Annotation( "MP:0008314") Annotation( "OBOL:automatic"^^xsd:string) "future pterygopalatine ganglia") AnnotationAssertion(Annotation( "MP:0008314") Annotation( "OBOL:automatic"^^xsd:string) "future sphenopalatine ganglion") AnnotationAssertion(Annotation( "EHDAA2:0000673") "future sphenopalatine parasympathetic ganglion") AnnotationAssertion(Annotation( "EHDAA2:0001889") Annotation( "OBOL:automatic"^^xsd:string) "future sphenopalatine parasympathetic ganglion") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010128") AnnotationAssertion(rdfs:label "future pterygopalatine ganglion") SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (femur cartilage element) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A femur endochondral element that is composed primarily of cartilage tissue.") AnnotationAssertion( "TODO - request EHDAA2") AnnotationAssertion( "EMAPA:17742") AnnotationAssertion(Annotation( "EMAPA:17742") "femoral cartilage condensation") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010129") AnnotationAssertion(rdfs:label "femur cartilage element") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "EMAPA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (embryonic autopod plate) AnnotationAssertion(Annotation( ) Annotation( "MP:0004576") Annotation( "UBERON:cjm"^^xsd:string) "The distal elements of the developing limb of vertebrates that will give rise to the autopod (e.g. manus, pes, paw).") AnnotationAssertion( "autopod plate") AnnotationAssertion( "limb plate") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010130") AnnotationAssertion(rdfs:label "embryonic autopod plate") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (conducting tissue of heart) AnnotationAssertion(Annotation( ) "Any portion of cardiac muscle tissue that is part of the conducting system of heart or the Purkinje fibers.") AnnotationAssertion( "EHDAA2:0004528") AnnotationAssertion( "FMA:83378") AnnotationAssertion(Annotation( "FMA:83378") "specialized conducting tissue of heart") AnnotationAssertion(Annotation( "FMA:83378") "specialized muscle tissue of heart") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010131") AnnotationAssertion(rdfs:label "conducting tissue of heart") SubClassOf( ) # Class: (gastroduodenal artery) AnnotationAssertion(Annotation( ) "A small blood vessel in the abdomen that supplies blood directly to the pylorus (distal part of the stomach) and proximal part of the duodenum, and indirectly to the pancreatic head (via the anterior and posterior superior pancreaticoduodenal arteries).") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0000310") AnnotationAssertion( "EHDAA:8574") AnnotationAssertion( "FMA:14775") AnnotationAssertion( "galen:GastroduodenalArtery") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "arteria gastroduodenalis") AnnotationAssertion( "UBERON:0010132") AnnotationAssertion(rdfs:label "gastroduodenal artery") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/6/65/Gray532.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (neuroendocrine gland) AnnotationAssertion(Annotation( "ISBN:0-683-40008-8"^^xsd:string) Annotation( "MP:0000631") "Any of the organized aggregations of cells that function as secretory or excretory organs and that release hormones in response to neural stimuli.") AnnotationAssertion( "MA:0000720") AnnotationAssertion( "neuroendocrine system gland") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010133") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "neuroendocrine gland") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (secretory circumventricular organ) AnnotationAssertion(Annotation( ) "A circumventricular organ that is capable of secreting substances into the cerebrospinal fluid.") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:35759") AnnotationAssertion( "MA:0002943") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010134") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "secretory circumventricular organ") SubClassOf(Annotation( "MA"^^xsd:string) ) SubClassOf(Annotation( "MA"^^xsd:string) ) # Class: (sensory circumventricular organ) AnnotationAssertion(Annotation( ) "A circumventricular organ that is capable of monitoring the levels of substances to the cerebrospinal fluid.") AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37741") AnnotationAssertion( "MA:0002944") AnnotationAssertion( "uberon") AnnotationAssertion( "humerosensory circumventricular organ") AnnotationAssertion(Annotation( "NeuroNames:2856") Annotation( ) "humerosensory system") AnnotationAssertion( "humerosensory system organ") AnnotationAssertion(Annotation( "NeuroNames:2856") Annotation( ) "sensitive circumventricular organs") AnnotationAssertion(Annotation( "NeuroNames:2856") Annotation( ) "sensitive organs") AnnotationAssertion(Annotation( "NeuroNames:2856") Annotation( ) "sensory CVOs") AnnotationAssertion(Annotation( "NeuroNames:2856") "sensory circumventricular organs") AnnotationAssertion( "UBERON:0010135") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "sensory circumventricular organ") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (epithelial sheet) AnnotationAssertion(Annotation( "GO:0002011") "An epithelial sheet is a flat surface consisting of closely packed epithelial cells.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010136") AnnotationAssertion(rdfs:label "epithelial sheet") SubClassOf( ) # Class: (polarized epithelium) AnnotationAssertion(Annotation( "GO:0001738") "A polarized epithelium is an epithelium where the epithelial sheet is oriented with respect to the planar axis.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010137") AnnotationAssertion(rdfs:label "polarized epithelium") AnnotationAssertion(rdfs:seeAlso "https://github.com/obophenotype/uberon/wiki/Epithelial-configurations"^^xsd:anyURI) SubClassOf( ) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (primitive sex cord of indifferent gonad) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A sex cord that is part of a indifferent gonad.") AnnotationAssertion( "note that this represents the indifferent structure.") AnnotationAssertion( "EHDAA2:0004051") AnnotationAssertion( "indifferent sex cord") AnnotationAssertion(Annotation( "EHDAA2:0004051") "primitive sex cords") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010141") AnnotationAssertion(rdfs:label "primitive sex cord of indifferent gonad") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (seminal vesicle fluid) AnnotationAssertion(Annotation( ) "A bodily secretion that is produced by a seminal vesicle.") AnnotationAssertion( "constitutes 60-70 % of the ejaculate in humans[MP]") AnnotationAssertion( "important for semen coagulation, sperm motility, and stability of sperm chromatin and suppression of the immune activity in the female reproductive tract[MP]") AnnotationAssertion(Annotation( "ncit"^^xsd:string) "in ncit, seminal fluid is a subtype of seminal vesicle secretion") AnnotationAssertion( "vesicular fluid") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0002053") AnnotationAssertion( "FMA:62969") AnnotationAssertion( "MA:0002526") AnnotationAssertion( "NCIT:C33529") AnnotationAssertion( "NCIT:C52552") AnnotationAssertion(Annotation( "ncithesaurus:Seminal_Fluid") "UMLS:C0036614") AnnotationAssertion(Annotation( "ncithesaurus:Seminal_Vesicle_Secretion") "UMLS:C0227987") AnnotationAssertion(Annotation( "FMA:62969") "secretion of seminal vesicle") AnnotationAssertion(Annotation( "FMA:62969") "seminal vesicle secretion") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "seminal fluid") AnnotationAssertion( "UBERON:0010143") AnnotationAssertion(rdfs:label "seminal vesicle fluid") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (paraurethral gland) AnnotationAssertion(Annotation( "MGI:anna"^^xsd:string) Annotation( "MP:0011793") "The numerous mucous-secreting glands found in several female mammalian species (including rodents and humans) on the anterior wall of the vagina, around the lower end of the urethra, and possessing a common paraurethral duct which opens (on each side) near the external urethral orifice; they are homologous with the prostate gland in males, have highly variable anatomy, and are believed to be the source of the female ejaculate, a lubricating fluid with a similar consistency to male prostatic fluid that is expelled through the urethra during sexual stimulation; like the male prostate, these glands are susceptible to infection (skenitis), cyst development, and cancer.") AnnotationAssertion(Annotation( "MP") "in MP female urethral gland, Skene gland and paraurethral gland are exact syns. Note that NCITA seems to use the term in a more generic way, as a parent for skene gland, cowper gland (which may be the same as the male bulbo-urethral gland)") AnnotationAssertion(Annotation( "EMAPA:29653") Annotation( "MP:0011793") "female urethral gland") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:36133") AnnotationAssertion( "EMAPA:36134") AnnotationAssertion( "FMA:20083") AnnotationAssertion( "NCIT:C12339") AnnotationAssertion(Annotation( "ncithesaurus:Paraurethral_Gland") "UMLS:C0221315") AnnotationAssertion(Annotation( "MP:0011793") "Skene gland") AnnotationAssertion(Annotation( "FMA:20083") Annotation( "MP:0011793") "Skene's gland") AnnotationAssertion(Annotation( ) Annotation( ) Annotation( "MP:0011793") "female prostate") AnnotationAssertion(Annotation( "FMA:20083") Annotation( "MP:0011793") "para-urethral gland") AnnotationAssertion(Annotation( ) "periurethral gland") AnnotationAssertion(Annotation( "EMAPA:36134") "urethral gland of clitoral urethra") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "MP:0011793") "Guerin's gland") AnnotationAssertion(Annotation( "MP:0011793") "Schueller's gland") AnnotationAssertion(Annotation( "EMAPA:36133") "Skene's gland of clitoral urethra") AnnotationAssertion(Annotation( ) Annotation( "MP:0011793") "U-spot") AnnotationAssertion(Annotation( ) "female urethral gland") AnnotationAssertion(Annotation( "MP:0011793") Annotation( ) "glandula vestibulares minor") AnnotationAssertion(Annotation( ) Annotation( ) "glandulae vestibulares minores") AnnotationAssertion( "UBERON:0010145") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "paraurethral gland") AnnotationAssertion( "Skenes:gland.jpg"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (paraurethral duct) AnnotationAssertion(Annotation( ) "The Skene's ducts are a pair of ducts leading from the Skene's glands to the surface of the vulva, to the left and right of the urethral opening.") AnnotationAssertion(Annotation( "FMA"^^xsd:string) "FMA has two classes that may be equivalent here") AnnotationAssertion( "UBERON:0035064") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:21445") AnnotationAssertion( "FMA:21860") AnnotationAssertion(Annotation( "FMA:21445") "Skene's duct") AnnotationAssertion(Annotation( "FMA:21860") "duct of Skene's gland") AnnotationAssertion(Annotation( "FMA:21860") "duct of paraurethral gland") AnnotationAssertion(Annotation( ) "female prostate duct") AnnotationAssertion(Annotation( "FMA:21860") "paraurethral gland duct") AnnotationAssertion( "periurethral duct") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "ductus paraurethrales urethrae femininae") AnnotationAssertion( "UBERON:0010146") AnnotationAssertion(rdfs:label "paraurethral duct") AnnotationAssertion( "Skenes:gland.jpg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (male accessory sex gland) AnnotationAssertion(Annotation( "BTO:0004798") "Any gland, other than the gonad, associated with the genital tract, such as the ampulla of the ductus deferens and the bulbourethral, prostate and vesicular glands of the male.") AnnotationAssertion( "BTO:0004798") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0004798") "male accessory gland") AnnotationAssertion( "male accessory reproductive gland") AnnotationAssertion( "UBERON:0010147") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "male accessory sex gland") SubClassOf(Annotation( "BTO"^^xsd:string) ) # Class: (mating plug) AnnotationAssertion(Annotation( ) "A gelatinous secretion used in the mating of some species. It is deposited by a male into a female genital tract and later hardens into a plug or glues the tract together.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "SPD:0000547") AnnotationAssertion(Annotation( ) "copulation plug") AnnotationAssertion(Annotation( "SPD:0000547") "copulatory plug") AnnotationAssertion(Annotation( ) "sperm plug") AnnotationAssertion(Annotation( ) "vaginal plug") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "sement") AnnotationAssertion(Annotation( ) "sphragis") AnnotationAssertion( "UBERON:0010148") AnnotationAssertion(rdfs:label "mating plug") SubClassOf( ) # Class: (duct of major vestibular gland) AnnotationAssertion(Annotation( ) "One of a pair of ducts leading from the Bartholin's glands to the surface of the vulva.") AnnotationAssertion( ) AnnotationAssertion( "FMA:20088") AnnotationAssertion(Annotation( "FMA:20088") "duct of greater vestibular gland") AnnotationAssertion(Annotation( "FMA:20088") "greater vestibular gland duct") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "Bartholin's duct") AnnotationAssertion( "UBERON:0010150") AnnotationAssertion(rdfs:label "duct of major vestibular gland") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (duct of bulbourethral gland) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A duct that is part of a bulbo-urethral gland.") AnnotationAssertion( ) AnnotationAssertion( "FMA:20091") AnnotationAssertion(Annotation( "FMA:20091") "bulbourethral gland duct") AnnotationAssertion(Annotation( "FMA:20091") "duct of bulbo-urethral gland") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) Annotation( ) "ductus glandulae bulbourethralis") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010151") AnnotationAssertion(rdfs:label "duct of bulbourethral gland") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (skin mucus) AnnotationAssertion(Annotation( ) "A mucous secretion that is produced by glands in the epidermis.") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0005082") "epidermal mucus") AnnotationAssertion( "skin mucous") AnnotationAssertion( "UBERON:0010152") AnnotationAssertion(rdfs:label "skin mucus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (parietomastoid suture) AnnotationAssertion(Annotation( ) "Unites the mastoid process of the temporal with the region of the mastoid angle of the parietal[WP:Squamosal_suture].") AnnotationAssertion( ) AnnotationAssertion( "FMA:52947") AnnotationAssertion( "parieto-mastoid suture of skull") AnnotationAssertion(Annotation( "FMA:52947") "parietomastoid suture of skull") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010155") AnnotationAssertion(rdfs:label "parietomastoid suture") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (sphenofrontal suture) AnnotationAssertion(Annotation( ) "The Sphenofrontal suture is the cranial suture between the sphenoid bone and the frontal bone.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:52938") AnnotationAssertion(Annotation( "FMA:52938") "frontosphenoid suture") AnnotationAssertion(Annotation( "FMA:52938") "sphenofrontal suture of skull") AnnotationAssertion( "uberon") AnnotationAssertion( "spheno-frontal suture") AnnotationAssertion(Annotation( ) "sphenofrontal") AnnotationAssertion(Annotation( ) "sutura sphenofrontalis") AnnotationAssertion(Annotation( ) Annotation( ) "sutura sphenofrontalis") AnnotationAssertion( "UBERON:0010156") AnnotationAssertion(rdfs:label "sphenofrontal suture") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/2/2d/Gray164.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (sphenoparietal suture) AnnotationAssertion(Annotation( ) "The Sphenoparietal suture is the cranial suture between the sphenoid bone and the parietal bone.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:52945") AnnotationAssertion( "spheno-parietal suture") AnnotationAssertion(Annotation( "FMA:52945") "sphenoparietal suture of skull") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "sutura sphenoparietalis") AnnotationAssertion( "UBERON:0010157") AnnotationAssertion(rdfs:label "sphenoparietal suture") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/2/2d/Gray164.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (sphenozygomatic suture) AnnotationAssertion(Annotation( ) "The Sphenozygomatic suture is the cranial suture between the sphenoid bone and the zygomatic bone.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:52956") AnnotationAssertion(Annotation( "FMA:52956") "sphenozygomatica suture of skull") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "sutura sphenozygomatica") AnnotationAssertion( "UBERON:0010158") AnnotationAssertion(rdfs:label "sphenozygomatic suture") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/a/a7/Gray189.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (occipitomastoid suture) AnnotationAssertion(Annotation( ) "The occipitomastoid suture is the cranial suture between the occipital bone and the mastoid portion of the temporal bone. It is continuous with the lambdoidal suture.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:52934") AnnotationAssertion(Annotation( "FMA:52934") "occipitomastoid suture of skull") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "occipito-mastoid suture") AnnotationAssertion(Annotation( ) "sutura occipitomastoidea") AnnotationAssertion(Annotation( ) Annotation( ) "sutura occipitomastoidea") AnnotationAssertion( "UBERON:0010159") AnnotationAssertion(rdfs:label "occipitomastoid suture") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/d/df/Occipitomastoideus.PNG"^^xsd:anyURI) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lumen of lymphatic vessel) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An anatomical cavity that surrounded_by a lymphatic vessel.") AnnotationAssertion( "FMA:59681") AnnotationAssertion(Annotation( "FMA:59681") "lumen of lymphatic duct") AnnotationAssertion(Annotation( "FMA:59681") "lymphatic vessel lumen") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010160") AnnotationAssertion(rdfs:label "lumen of lymphatic vessel") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lumen of blood vessel) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An anatomical cavity that surrounded_by a blood vessel.") AnnotationAssertion( ) AnnotationAssertion( "FMA:312610") AnnotationAssertion( "blood vessel lumen") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010161") AnnotationAssertion(rdfs:label "lumen of blood vessel") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (eyebrow) AnnotationAssertion(Annotation( ) "The eyebrow is an area of thick, delicate hairs above the eye that follows the shape of the lower margin of the brow ridges. Their main function is to protect the eye, but they are also important to human communication and facial expression. It is not uncommon for people to modify their eyebrows by means of hair addition or removal, make up, or piercings.") AnnotationAssertion(Annotation( "ncit"^^xsd:string) "in NCIT, this is an 'eye appendage'") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:54237") AnnotationAssertion( "MESH:D005138") AnnotationAssertion( "NCIT:C32575") AnnotationAssertion(Annotation( "ncithesaurus:Eyebrow") "UMLS:C0015420") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "supercilium") AnnotationAssertion( "UBERON:0010163") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "eyebrow") AnnotationAssertion( "Eyes:chris.jpg"^^xsd:anyURI) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (collection of hairs) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An anatomical cluster that composed_primarily_of a strand of hair.") AnnotationAssertion( "FMA:70752") AnnotationAssertion(Annotation( "FMA:70752") "hairs") AnnotationAssertion(Annotation( "FMA:70752") "hairs set") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) Annotation( ) "pili") AnnotationAssertion(Annotation( "FMA:70752") "set of hairs") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010164") AnnotationAssertion(rdfs:label "collection of hairs") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (collection of hair on face) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A collection of hairs that is part of a face.") AnnotationAssertion( "FMA:70741") AnnotationAssertion(Annotation( "FMA:70741") "facial hairs set") AnnotationAssertion(Annotation( "FMA:70741") "set of facial hairs") AnnotationAssertion( "uberon") AnnotationAssertion( "facial hair") AnnotationAssertion( "UBERON:0010165") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "collection of hair on face") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (coat of hair) AnnotationAssertion( "coat") AnnotationAssertion( "fleece") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:36485") AnnotationAssertion( "NCIT:C88212") AnnotationAssertion( "hair coat") AnnotationAssertion( "set of coat hairs") AnnotationAssertion( "fur coat") AnnotationAssertion( "lanugo") AnnotationAssertion( "mane") AnnotationAssertion( "velli") AnnotationAssertion( "wool coat") AnnotationAssertion( "wooly coat") AnnotationAssertion( "uberon") AnnotationAssertion( "coat pelt") AnnotationAssertion( "pelage") AnnotationAssertion( "pelt") AnnotationAssertion( "UBERON:0010166") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "coat of hair") SubClassOf( ) # Class: (beard) AnnotationAssertion(Annotation( ) "The collection of hair that grows on the chin, cheeks and neck of human beings. Usually, only pubescent or adult males are able to grow beards. However, women with hirsutism may develop a beard. When differentiating between upper and lower facial hair, a beard specifically includes the moustache, which refers to hair above the upper lip and around it.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:54240") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010167") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "beard") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (collection of eyelashes) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A collection of hair on face that is part of a eyelash.") AnnotationAssertion( ) AnnotationAssertion( "FMA:70742") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) Annotation( ) "cilia") AnnotationAssertion(Annotation( "FMA:70742") "eyelashes") AnnotationAssertion(Annotation( "FMA:70742") "eyelashes set") AnnotationAssertion(Annotation( "FMA:70742") "set of eyelashes") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010168") AnnotationAssertion(rdfs:label "collection of eyelashes") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (moustache) AnnotationAssertion(Annotation( ) "Facial hair grown on the outer surface of the upper lip. It may or may not be accompanied by a type of beard, a facial hair style grown and cropped to cover most of the lower half of the face.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:59652") AnnotationAssertion( "mustache") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:59652") "set of hair of upper lip proper") AnnotationAssertion( "UBERON:0010169") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "moustache") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (region of neural crest) AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0000045") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "A cell population arising from the dorsolateral aspect of the central nervous system primordium during the segmentation period, and later migrating along stereotyped pathways to give rise to a diverse and well-defined set of cell types including pigment cells, peripheral neurons and glia, and head cartilage. Kimmel et al, 1995.[TAO]") AnnotationAssertion( "EMAPA:32737") AnnotationAssertion( "TAO:0000045") AnnotationAssertion( "ZFA:0000045") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010170") AnnotationAssertion(rdfs:label "region of neural crest") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (strand of hair of face) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A strand of hair that is part of a face.") AnnotationAssertion( ) AnnotationAssertion( "FMA:54360") AnnotationAssertion(Annotation( "FMA:54360") "face hair") AnnotationAssertion( "face hair strand") AnnotationAssertion(Annotation( "FMA:54360") "hair of face") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:54360") "facial hair") AnnotationAssertion( "UBERON:0010171") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "strand of hair of face") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (bulb of aorta) AnnotationAssertion(Annotation( "MP:0011572") "The portion of the left ventricular outflow tract delineated by the sinotubular ridge superiorly and the bases of the valve leaflets inferiorly; it comprises the aortic sinuses, the aortic valve leaflets, the commissures, and the interleaflet triangles.") AnnotationAssertion(Annotation( ) "The dilated first part of the aorta containing the aortic semilunar valves and the aortic sinuses.") AnnotationAssertion( ) AnnotationAssertion( "BTO:0004695") AnnotationAssertion( "FMA:3740") AnnotationAssertion(Annotation( "MP:0011575") "aorta bulb") AnnotationAssertion(Annotation( "FMA:3740") "aortic bulb") AnnotationAssertion(Annotation( "MP:0011572") "aortic root") AnnotationAssertion(Annotation( "FMA:3740") "bulb of ascending aorta") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) Annotation( ) "bulbus aortae") AnnotationAssertion(Annotation( "FMA:3740") "root of aorta") AnnotationAssertion(Annotation( "FMA:3740") "supraaortic valve area") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010172") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "bulb of aorta") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (sinotubular junction) AnnotationAssertion(Annotation( "MP:0011572") "The point in the ascending aorta where the aortic sinuses end and the aorta becomes a tubular structure.") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37951") AnnotationAssertion(Annotation( "MP:0011572") "sinotubular ridge") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010173") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "sinotubular junction") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "MP"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (Schweigger-Seidel sheath) AnnotationAssertion(Annotation( ) Annotation( "PMCID:PMC3204613") "A phagocytic sleeve that is part of a sheathed arteriole of the spleen, and is sometimes referred to as a splenic ellipsoid. It is a spindle-shaped thickening in the walls of the second part of the arterial branches forming the penicilli in the spleen.") AnnotationAssertion( ) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010174") AnnotationAssertion(rdfs:label "Schweigger-Seidel sheath") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (nutrient foramen vein) AnnotationAssertion(Annotation( ) "A vein or veins draining a bone and emerging from a nutrient foramen.") AnnotationAssertion( "FMA:50780") AnnotationAssertion(Annotation( "FMA:50780") "nutrient vein") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "vena nutricia") AnnotationAssertion( "UBERON:0010175") AnnotationAssertion(rdfs:label "nutrient foramen vein") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) SubClassOf( ObjectSomeValuesFrom( )) # Class: (nutrient foramen artery) AnnotationAssertion(Annotation( ) "The medullary or nutrient artery, usually accompanied by one or two veins, sends branches upward and downward to the bone marrow, which ramify in the medullary membrane, and give twigs to the adjoining canals.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:50779") AnnotationAssertion( "NCIT:C33189") AnnotationAssertion(Annotation( "ncithesaurus:Nutrient_Artery") "UMLS:C0278431") AnnotationAssertion(Annotation( "FMA:50779") "nutrient artery") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "a. nutricia") AnnotationAssertion(Annotation( ) Annotation( ) "a. nutriens") AnnotationAssertion(Annotation( ) "aretria nutricia") AnnotationAssertion( "UBERON:0010176") AnnotationAssertion(rdfs:label "nutrient foramen artery") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) SubClassOf( ObjectSomeValuesFrom( )) # Class: (straight venules of kidney) AnnotationAssertion(Annotation( ) "The straight venules of kidney are branches from the plexuses at the apices of the medullary pyramids, formed by the terminations of the arteriae rectae. They run outward in a straight course between the tubes of the medullary substance, and joining, as above stated, the interlobular veins, form venous arcades; these in turn unite and form veins which pass along the sides of the pyramids. Contains fenestrated capillaries.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:72007") AnnotationAssertion(Annotation( "FMA:72007") "set of straight venules of kidney") AnnotationAssertion(Annotation( "FMA:72007") "venulae rectae of kidney") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) Annotation( ) "venulae rectae renis") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "venae rectae") AnnotationAssertion(Annotation( ) "venulae rectae") AnnotationAssertion(Annotation( ) Annotation( ) "venulae rectae renis") AnnotationAssertion(Annotation( ) "venulae recti") AnnotationAssertion( "UBERON:0010181") AnnotationAssertion(rdfs:label "straight venules of kidney") SubClassOf( ) SubClassOf( ) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (liver trabecula) AnnotationAssertion(Annotation( "GO:0060344") Annotation( "OBOL:automatic"^^xsd:string) "A trabecula that is part of a liver.") AnnotationAssertion( "uberon") AnnotationAssertion( "hepatic trabecula") AnnotationAssertion( "UBERON:0010183") AnnotationAssertion(rdfs:label "liver trabecula") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (rete ovarii) AnnotationAssertion(Annotation( ) "A structure formed from the primary sex cords in females, counterpart of the rete testis in males.") AnnotationAssertion( "todo") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:17966") AnnotationAssertion( "MA:0003237") AnnotationAssertion( "NCIT:C61561") AnnotationAssertion(Annotation( "ncithesaurus:Rete_Ovarii") "UMLS:C0227880") AnnotationAssertion(Annotation( "MA:0003237") "rete ovarii of ovary") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010185") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "rete ovarii") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (male urethral gland) AnnotationAssertion(Annotation( "MGI:anna"^^xsd:string) Annotation( "MP:0011794") "Any of the numerous small mucous-secreting glands located in the wall of the penile urethra.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:29645") AnnotationAssertion( "FMA:21443") AnnotationAssertion( "NCIT:C49311") AnnotationAssertion(Annotation( "ncithesaurus:Urethral_Gland") "UMLS:C1314737") AnnotationAssertion(Annotation( "FMA:21443") "Littre's gland") AnnotationAssertion( "gland of Littre") AnnotationAssertion( "gland of male urethra") AnnotationAssertion( "male urethra gland") AnnotationAssertion(Annotation( "FMA:21443") "urethral gland (male)") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "glandulae urethrales urethrae masculinae") AnnotationAssertion( "UBERON:0010186") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "male urethral gland") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (female urethral gland) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An urethral gland that is part of a female urethra.") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:29653") AnnotationAssertion( "FMA:21444") AnnotationAssertion( "female urethra gland") AnnotationAssertion( "gland of female urethra") AnnotationAssertion(Annotation( "FMA:21444") "urethral gland (female)") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010187") AnnotationAssertion(rdfs:label "female urethral gland") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (protuberance) AnnotationAssertion(Annotation( "EHDAA2:0003250") "A roughly circular bulge in a surface.") AnnotationAssertion( "requires review") AnnotationAssertion( "AEO:0000205") AnnotationAssertion( "EHDAA2:0003250") AnnotationAssertion( "FMA:82506") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010188") AnnotationAssertion(rdfs:label "protuberance") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (right atrium venous valve) AnnotationAssertion(Annotation( "EHDAA2"^^xsd:string) "part_of in EHDAA2. Only child in MA.") AnnotationAssertion( "EHDAA2:0001762") AnnotationAssertion( "EMAPA:17010") AnnotationAssertion( "EMAPA:17328") AnnotationAssertion( "MA:0001872") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "EHDAA2:0001762") "right venous valve") AnnotationAssertion( "UBERON:0010189") AnnotationAssertion(rdfs:label "right atrium venous valve") SubClassOf( ) SubClassOf( ) # Class: (pair of dorsal aortae) AnnotationAssertion(Annotation( "ISBN:0-914294-08-3") Annotation( "MP:0004787") "The paired arterial structures of the embryo that supplies each developing somite via efferent segmental arteries; the dorsal aortae articulate with the umbilical arteries, which return mixed blood to the villi of the chorion for reoxygenation.") AnnotationAssertion( "EHDAA2:0000410") AnnotationAssertion( "EMAPA:18606") AnnotationAssertion( "MA:0000476") AnnotationAssertion(Annotation( "EHDAA2:0000410") "paired dorsal aortae") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010190") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "pair of dorsal aortae") SubClassOf(Annotation( "EHDAA2"^^xsd:string) ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (aortic system) AnnotationAssertion( "EHDAA2:0004512") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010191") AnnotationAssertion(rdfs:label "aortic system") SubClassOf( ) SubClassOf(Annotation( "Wikipedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (genital artery) AnnotationAssertion(Annotation( ) Annotation( "ISBN:0073040584"^^xsd:string) "One of the laterally paired arteries that supply the gonads.") AnnotationAssertion( ) AnnotationAssertion( "gonadal artery") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010192") AnnotationAssertion(rdfs:label "genital artery") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (renal portal vein) AnnotationAssertion(Annotation( "ISBN:0073040584"^^xsd:string) "A portal vein that empties into capillaries within the kidneys.") AnnotationAssertion(Annotation( "ISBN:0073040584"^^xsd:string) "function not well understood.") AnnotationAssertion( "TAO:0000577") AnnotationAssertion( "ZFA:0000577") AnnotationAssertion(Annotation( "ZFA:0000577") Annotation( ) "renal portal veins") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010193") AnnotationAssertion(rdfs:label "renal portal vein") SubClassOf(Annotation( "ZFA"^^xsd:string) ) SubClassOf( ) SubClassOf(Annotation( "ZFA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (hepatic portal system) AnnotationAssertion(Annotation( "ISBN:0073040584"^^xsd:string) "A portal system that begins in capillaries in the wall of the digestive tract and and runs as the hepatic portal vein to the liver.") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0010225") Annotation( "AAO"^^xsd:string) Annotation( "AAO:BJB"^^xsd:string) "Part of the circulatory system which includes the ventral abdominal vein, pelvic veins, and portal vein and collects blood from the pelvic region, liver, gall bladder and stomach.[AAO]") AnnotationAssertion( "AAO:0010225") AnnotationAssertion(Annotation( "AAO:0010225") "hepatic-portal system") AnnotationAssertion( "portal system of liver") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010194") AnnotationAssertion(rdfs:label "hepatic portal system") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (trunk of common carotid artery) AnnotationAssertion(Annotation( ) "The initial part of the entire common carotid artery ending with the point where the artery bifurcates into an external carotid artery and an internal carotid artery.") AnnotationAssertion( "EHDAA2:0000306") AnnotationAssertion( "EMAPA:17855") AnnotationAssertion( "FMA:69323") AnnotationAssertion(Annotation( "FMA:69323") "common carotid arterial trunk") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "EHDAA2:0000306") Annotation( ) "common carotid artery") AnnotationAssertion( "UBERON:0010197") AnnotationAssertion(rdfs:label "trunk of common carotid artery") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (carotid duct) AnnotationAssertion(Annotation( ) Annotation( "MP:MP"^^xsd:string) "A segment of the embryonic dorsal aorta between points of juncture with the third and fourth arch arteries; it regresses early in development to allow the carotid axis to take its definitive appearance.") AnnotationAssertion(Annotation( "ISBN:0073040584"^^xsd:string) "In amphibians, closes at metamorphosis") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:17006") AnnotationAssertion(Annotation( "EMAPA:17006") "ductus caroticus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010198") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "carotid duct") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (bona-fide anatomical boundary) AnnotationAssertion(Annotation( "CARO:0001004") "An anatomical boundary that corresponds to some physical discontinuity.") AnnotationAssertion( "CARO:0001004") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010199") AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "One might argue that all boundaries are actually fiat in the sense that there must be some fiat element at a fine enough scale of granularity. This ontology choses to ignore this issue as below the level of granularity relevant to anatomy. (DOS121102)") AnnotationAssertion(rdfs:label "bona-fide anatomical boundary") SubClassOf(Annotation( "CARO"^^xsd:string) ) # Class: (mesencephalic vein) AnnotationAssertion(Annotation( ) Annotation( "XAO:0004174") "One of the several veins that drain the mesencephalon; the posterior ones are tributaries to the great cerebral vein; the lateral ones are tributaries to the basal vein. The main veins are: pontomesencephalic vein [TA] (vena pontomesencephalica [TA]), interpeduncular veins [TA] (venae interpedunculares [TA]), intercollicular vein [TA] (vena intercollicularis [TA]), and lateral mesencephalic vein [TA] (vena mesencephalica lateralis [TA])[MedLex]. The major vein of the midbrain, which crosses the midbrain medially to meet it's partner the mesencephalic artery[XAO].") AnnotationAssertion( "review this term, check taxon scope; note FMA has specific subtypes") AnnotationAssertion( ) AnnotationAssertion( "TAO:0005092") AnnotationAssertion( "XAO:0004174") AnnotationAssertion( "ZFA:0005092") AnnotationAssertion(Annotation( ) "vena mesencephalica") AnnotationAssertion(Annotation( ) Annotation( ) "venae mesencephalicae") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "TAO:0005092") "msv") AnnotationAssertion( "UBERON:0010205") AnnotationAssertion(rdfs:label "mesencephalic vein") SubClassOf(Annotation( "XAO"^^xsd:string) ) # Class: (plica semilunaris of conjunctiva) AnnotationAssertion(Annotation( ) "The plica semilunaris is a small fold of bulbar conjunctiva on the medial canthus of the eye. It is loose, so that eye movements are not restricted.") AnnotationAssertion( "It is the vestigial remnant of the nictitating membrane") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:59045") AnnotationAssertion(Annotation( "FMA:59045") "plica semilunaris (conjunctiva)") AnnotationAssertion(Annotation( "FMA:59045") "semilunar fold of conjunctiva") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "plica semilunaris conjunctivae") AnnotationAssertion(Annotation( ) "plica semilunaris of the conjunctiva") AnnotationAssertion( "UBERON:0010209") AnnotationAssertion(rdfs:label "plica semilunaris of conjunctiva") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/1/1e/Gray1205.png"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "Wikipedia"^^xsd:string) ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (blood clot) AnnotationAssertion(Annotation( ) Annotation( "BTO:0000102") "A semisolid gelatinous mass of coagulated blood that consists of red blood cells, white blood cells, and platelets entrapped in a fibrin network.") AnnotationAssertion( ) AnnotationAssertion( "BTO:0000102") AnnotationAssertion( "galen:BloodClot") AnnotationAssertion( "coagulated blood") AnnotationAssertion( "fibrin clot") AnnotationAssertion(Annotation( ) "hemostatic plug") AnnotationAssertion(Annotation( "BTO:0000102") "thrombus") AnnotationAssertion( "clot") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010210") AnnotationAssertion(rdfs:label "blood clot") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "BTO"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (granulation tissue) AnnotationAssertion(Annotation( "BTO:0003257") "Highly vascularized tissue that replaces the initial fibrin clot in a wound. Vascularization is by ingrowth of capillary endothelium from the surrounding vasculature. The tissue is also rich in fibroblasts (that will eventually produce the fibrous tissue) and leucocytes.") AnnotationAssertion( "BTO:0003257") AnnotationAssertion( "MESH:D006097") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010211") AnnotationAssertion(rdfs:label "granulation tissue") SubClassOf(Annotation( "BTO"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (laryngeal apparatus) AnnotationAssertion(Annotation( "AAO:0000267") "Apparatus located between the lungs and the buccal cavity. This apparatus is composed of a pair of arytenoid cartilages that are supported by the cricoid ring.") AnnotationAssertion( "check this. See also https://github.com/obophenotype/uberon/wiki/The-axial-skeleton") AnnotationAssertion( "AAO:0000267") AnnotationAssertion( "EHDAA2:0000904") AnnotationAssertion(Annotation( "EHDAA2:0000904") "laryngeal cartilage system") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010212") AnnotationAssertion(rdfs:label "laryngeal apparatus") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (laryngeal pre-cartilage condensation) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010213") AnnotationAssertion(rdfs:label "laryngeal pre-cartilage condensation") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "EHDAA2-abstracted") ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2-abstracted") ObjectSomeValuesFrom( )) # Class: (cricoid pre-cartilage condensation) AnnotationAssertion( "EHDAA2:0000327") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010214") AnnotationAssertion(rdfs:label "cricoid pre-cartilage condensation") SubClassOf( ) # Class: (arytenoid swellings) AnnotationAssertion(Annotation( ) "Paired primordial elevations, on either side of the embryonic larynx, within which the arytenoid cartilages are formed.") AnnotationAssertion(Annotation( "EHDAA2"^^xsd:string) "EHDAA2 and EMAPA appear to be inconsistent") AnnotationAssertion( "EHDAA2:0000146") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010215") AnnotationAssertion(rdfs:label "arytenoid swellings") SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ) SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (thyroid pre-cartilage condensation) AnnotationAssertion( "EHDAA2:0004088") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010219") AnnotationAssertion(rdfs:label "thyroid pre-cartilage condensation") SubClassOf( ) # Class: (arytenoid pre-cartilage condensation) AnnotationAssertion( "EHDAA2:0000144") AnnotationAssertion( "EMAPA:17387") AnnotationAssertion( "VHOG:0000998") AnnotationAssertion(Annotation( "EMAPA:17387") "arytenoid swelling pre-cartilage condensation") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010220") AnnotationAssertion(rdfs:label "arytenoid pre-cartilage condensation") SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (laryngeal associated mesenchyme) AnnotationAssertion( "EHDAA2:0004085") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010221") AnnotationAssertion(rdfs:comment "Many sources say: thyroid cartilage from arch 4 other laryngeal cartilage (cricoid/arytenoid) from 6?") AnnotationAssertion(rdfs:label "laryngeal associated mesenchyme") SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ) SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "Wikipedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "Wikipedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "Wikipedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (anatomical line between pupils) AnnotationAssertion( "inter-pupillary line") AnnotationAssertion( "interpupillary line") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010222") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "anatomical line between pupils") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (left pupil) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A pupil that is part of a left eye.") AnnotationAssertion( ) AnnotationAssertion( "FMA:58254") AnnotationAssertion(Annotation( "FMA:58254") "pupil of left eye") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010223") AnnotationAssertion(rdfs:label "left pupil") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (right pupil) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A pupil that is part of a right eye.") AnnotationAssertion( ) AnnotationAssertion( "FMA:58253") AnnotationAssertion(Annotation( "FMA:58253") "pupil of right eye") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010224") AnnotationAssertion(rdfs:label "right pupil") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (thalamic complex) AnnotationAssertion(Annotation( ) "A nuclear complex which in mammals consists of four parts, the hypothalamus, epithalamus, ventral thalamus, and dorsal thalamus[WP,modified].") AnnotationAssertion( "EHDAA2:0004469") AnnotationAssertion( "FMA:258745") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010225") AnnotationAssertion(rdfs:label "thalamic complex") SubClassOf( ) SubClassOf( ) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (future cardiac atrium) AnnotationAssertion(Annotation( "ZFA:0001718") "Multi-tissue structure that is part of the heart tube and will become the cardiac atrium.") AnnotationAssertion( "FMA:71005") AnnotationAssertion( "TAO:0002228") AnnotationAssertion( "ZFA:0001718") AnnotationAssertion(Annotation( "ZFA:0001718") "presumptive atrium heart tube") AnnotationAssertion(Annotation( "FMA:71005") "primordial atrium") AnnotationAssertion(Annotation( "FMA:71005") "primordial cardiac atrium") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010227") AnnotationAssertion(rdfs:label "future cardiac atrium") SubClassOf( ) SubClassOf(Annotation( "ZFA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (eyeball of camera-type eye) AnnotationAssertion(Annotation( "UBERON:cjm"^^xsd:string) "The core globe-shaped component of the camera-type eye.") AnnotationAssertion( "See notes for camera-type eye") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:12513") AnnotationAssertion( "MIAA:0000283") AnnotationAssertion( "VHOG:0001616") AnnotationAssertion( "bulbus oculi") AnnotationAssertion(Annotation( "VHOG:0001616") "eye globe") AnnotationAssertion(Annotation( "FMA:12513") "eyeball") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "eye") AnnotationAssertion(Annotation( "HP:0100886") Annotation( "MIAA:0000283") "globe") AnnotationAssertion( "UBERON:0010230") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "eyeball of camera-type eye") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (anatomical line between outer ears) AnnotationAssertion( "uberon") AnnotationAssertion( "inter-otic line") AnnotationAssertion( "inter-pinna line") AnnotationAssertion( "otic line") AnnotationAssertion( "UBERON:0010231") AnnotationAssertion(rdfs:label "anatomical line between outer ears") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (placodal ectoderm) AnnotationAssertion( "FMA:293966") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010232") AnnotationAssertion(rdfs:label "placodal ectoderm") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (stroma of thyroid gland) AnnotationAssertion(Annotation( ) "The connective tissue that supports the lobules and follicles of the thyroid gland.") AnnotationAssertion( ) AnnotationAssertion( "FMA:86304") AnnotationAssertion(Annotation( "FMA:86304") "thyroid gland stroma") AnnotationAssertion( "thyroid stroma") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010233") AnnotationAssertion(rdfs:label "stroma of thyroid gland") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (palatopharyngeus muscle) AnnotationAssertion(Annotation( ) "The palatopharyngeus or palatopharyngeal or pharyngopalatinus muscle is a long, fleshy fasciculus, narrower in the middle than at either end, forming, with the mucous membrane covering its surface, the palatopharyngeal arch.") AnnotationAssertion(Annotation( "2012-07-02"^^xsd:string) Annotation( "FEED"^^xsd:string) Annotation( "http://www.feedexp.org"^^xsd:string) "Palatopharyngeus is a muscle that attaches to the palatine bones, soft palate, and pharynx and is innervated by Cranial Nerve X via the pharyngeal plexus.[FEED]") AnnotationAssertion( "It is separated from the palatoglossus muscle by an angular interval, in which the palatine tonsil is lodged. It arises from the soft palate, where it is divided into two fasciculi by the levator veli palatini and musculus uvulae") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:46666") AnnotationAssertion( "palatopharyngeal muscle") AnnotationAssertion(Annotation( "FMA:46666") "palatopharyngeus") AnnotationAssertion(Annotation( ) "pharyngopalatinus muscle") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "musculus palatopharyngeus") AnnotationAssertion(Annotation( ) "pharyngopalatinus") AnnotationAssertion( "UBERON:0010234") AnnotationAssertion(rdfs:label "palatopharyngeus muscle") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/1/1b/Musculuspalatopharyngeus.png"^^xsd:anyURI) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf(Annotation( "Wikipedia"^^xsd:string) ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA-abduced-lr"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "vagus nerve and cranial accessory nerve") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "vagus nerve and cranial accessory nerve") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "palatine aponeurosis and hard palate") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "Upper border of thyroid cartilage") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (uvular muscle) AnnotationAssertion(Annotation( ) "The musculus uvulae (azygos uvulae) is a muscle of the soft palate. It arises from the posterior nasal spine of the palatine bones and from the palatine aponeurosis. It descends to be inserted into the uvula and functions to move and shape it. It is innervated by the pharyngeal branch of the vagus nerve via the pharyngeal plexus[WP].") AnnotationAssertion(Annotation( "2012-07-02"^^xsd:string) Annotation( "FEED"^^xsd:string) Annotation( "http://www.feedexp.org"^^xsd:string) "The muscle of the uvuli is an integral part of the soft palate and is innervated by Cranial Nerve X .[FEED]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:46733") AnnotationAssertion(Annotation( "FMA:46733") "uvular muscle") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "azygos uvulae") AnnotationAssertion(Annotation( ) "m. uvulae") AnnotationAssertion(Annotation( ) "musculus uvulae") AnnotationAssertion(Annotation( ) "musculus uvulae muscle") AnnotationAssertion(Annotation( ) "uvulae muscle") AnnotationAssertion( "UBERON:0010235") AnnotationAssertion(rdfs:label "uvular muscle") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/b/b7/Gray169.png"^^xsd:anyURI) SubClassOf(Annotation( "Wikipedia"^^xsd:string) ) SubClassOf(Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (molar gland) AnnotationAssertion( ) AnnotationAssertion( "FMA:59794") AnnotationAssertion(Annotation( "FMA:59794") "molar salivary gland") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010241") AnnotationAssertion(rdfs:comment "a variety of mammals have salivary glands variously terms upper molar/buccal gland - this class groups all of these") AnnotationAssertion(rdfs:label "molar gland") SubClassOf( ) # Class: (anterior buccal gland) AnnotationAssertion(Annotation( "ISBN:0-683-40008-8"^^xsd:string) Annotation( "MP:0009519") "The racemose, mucous or serous glands in the submucous tissue of the cheeks.") AnnotationAssertion( "MA:0002700") AnnotationAssertion( "uberon") AnnotationAssertion( "anterior buccal salivary gland") AnnotationAssertion( "UBERON:0010242") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "anterior buccal gland") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (merocrine gland) AnnotationAssertion(Annotation( ) Annotation( "MGI:anna"^^xsd:string) Annotation( "MP:0013544") "An exocrine gland whose secretions are excreted via exocytosis from secretory cells into an epithelial-walled duct or ducts and thence onto a bodily surface or into the lumen; the gland releases its product and no part of the gland is lost or damaged.") AnnotationAssertion( "merocrine") AnnotationAssertion( ) AnnotationAssertion( "BTO:0002324") AnnotationAssertion( "MA:0003041") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010243") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "merocrine gland") SubClassOf( ) # Class: (posterior meningeal artery) AnnotationAssertion(Annotation( ) "The posterior meningeal artery are small vessels which are branches of the ascending pharyngeal artery which supply the dura mater. It passes through the mastoid foramen before entering the cranium via the jugular foramen.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:49503") AnnotationAssertion( "NCIT:C33369") AnnotationAssertion(Annotation( "ncithesaurus:Posterior_Meningeal_Artery") "UMLS:C0221310") AnnotationAssertion(Annotation( "FMA:49503") "terminal branch of ascending pharyngeal artery") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "arteria meningea posterior") AnnotationAssertion(Annotation( ) "meningeal branches of the ascending pharyngeal artery") AnnotationAssertion(Annotation( ) Annotation( ) "posterior meningeal arteries") AnnotationAssertion( "UBERON:0010249") AnnotationAssertion(rdfs:label "posterior meningeal artery") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/8/81/Gray193.png"^^xsd:anyURI) SubClassOf( ) DisjointClasses(Annotation( "lexical"^^xsd:string) ) # Class: (middle meningeal artery) AnnotationAssertion(Annotation( ) "The middle meningeal artery is typically the third branch of the first part (retromandibular part) of the maxillary artery; one of the two terminal branches of the external carotid artery. After branching off the maxillary artery in the infratemporal fossa, it runs through the foramen spinosum to supply the dura mater and the calvaria. The middle meningeal artery is the largest of the three (paired) arteries which supply the meninges, the others being the anterior meningeal artery and the posterior meningeal artery. In approximately half of subjects it branches into an accessory meningeal artery. The middle meningeal artery runs beneath the pterion. It is vulnerable to injury at this point, where the skull is thin. Rupture of the artery may give rise to an epidural hematoma.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:49711") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "arteria meningea media") AnnotationAssertion(Annotation( ) Annotation( ) "arteria meningea media") AnnotationAssertion( "UBERON:0010250") AnnotationAssertion(rdfs:label "middle meningeal artery") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/1/1e/Middle_meningeal_artery.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (anterior meningeal artery) AnnotationAssertion(Annotation( ) "A meningeal branch to the dura mater arising from the anterior ethmoidal artery.") AnnotationAssertion( "this needs checking as part of a general revision of the blood vessels and their branches - unclear if the anterior meningeal artery should be treated separately from the anterior ethmoidal artery (ie as a branch) or the same thing") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:49993") AnnotationAssertion( "NCIT:C32099") AnnotationAssertion(Annotation( "ncithesaurus:Anterior_Meningeal_Artery") "UMLS:C0226187") AnnotationAssertion(Annotation( "FMA:49993") "anterior meningeal branch of anterior ethmoidal artery") AnnotationAssertion(Annotation( "FMA:49993") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "ramus meningeus anterior (arteria ethmoidalis anterioris)") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "a. ethmoidalis anterior") AnnotationAssertion(Annotation( ) "anterior ethmoid arteries") AnnotationAssertion(Annotation( ) "anterior ethmoid artery") AnnotationAssertion(Annotation( ) "anterior meningeal arteries") AnnotationAssertion(Annotation( ) "anterior meningeal artery") AnnotationAssertion(Annotation( ) Annotation( ) "arteria ethmoidalis anterior") AnnotationAssertion( "UBERON:0010251") AnnotationAssertion(rdfs:label "anterior meningeal artery") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/c/ce/Gray514.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "Wikipedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (1st arch mandibular mesenchyme from neural crest) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "Mesenchyme that develops_from a neural crest and is part of a 1st arch mandibular mesenchyme.") AnnotationAssertion( "EHDAA2:0000037") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010252") AnnotationAssertion(rdfs:label "1st arch mandibular mesenchyme from neural crest") SubClassOf( ) SubClassOf(Annotation( "inferred") ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (1st arch maxillary mesenchyme from neural crest) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "Mesenchyme that develops_from a neural crest and is part of a 1st arch maxillary mesenchyme.") AnnotationAssertion( "EHDAA2:0000044") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010253") AnnotationAssertion(rdfs:label "1st arch maxillary mesenchyme from neural crest") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (2nd arch mesenchyme from neural crest) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "Mesenchyme that develops_from a neural crest and is part of a 2nd arch mesenchyme.") AnnotationAssertion( "EHDAA2:0000068") AnnotationAssertion( "EMAPA:16281") AnnotationAssertion( "neural crest derived arch 2 mesenchyme") AnnotationAssertion( "pharyngeal arch 2 mesenchyme from neural crest") AnnotationAssertion( "uberon") AnnotationAssertion( "branchial arch 2 mesenchyme from neural crest") AnnotationAssertion( "UBERON:0010254") AnnotationAssertion(rdfs:label "2nd arch mesenchyme from neural crest") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (3rd arch mesenchyme from neural crest) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "Mesenchyme that develops_from a neural crest and is part of a 3rd arch mesenchyme.") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000571") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "DOI:10.1046/j.1469-7580.2001.19910133.x Graham A. The development and evolution of the pharyngeal arches. J Anat (2001)"^^xsd:string) "In all vertebrates, the pharyngeal apparatus develops from a series of bulges found on the lateral surface of the head, the pharyngeal arches, which consist of a number of different embryonic cell types. Each arch has an external covering of ectoderm and inner covering of endoderm, and between these a mesenchymal filling of neural crest with a central core of mesoderm.[well established][VHOG]") AnnotationAssertion( "EHDAA2:0000083") AnnotationAssertion( "EMAPA:16404") AnnotationAssertion( "VHOG:0000571") AnnotationAssertion(Annotation( "VHOG:0000571") "3rd pharyngeal arch mesenchyme derived from neural crest") AnnotationAssertion(Annotation( "EMAPA:16404") "mesenchyme derived from neural crest of mesenchyme of 3rd arch") AnnotationAssertion( "neural crest derived arch 3 mesenchyme") AnnotationAssertion( "pharyngeal arch 3 mesenchyme from neural crest") AnnotationAssertion( "uberon") AnnotationAssertion( "branchial arch 3 mesenchyme from neural crest") AnnotationAssertion( "UBERON:0010255") AnnotationAssertion(rdfs:label "3rd arch mesenchyme from neural crest") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (4th arch mesenchyme from neural crest) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "Mesenchyme that develops_from a neural crest and is part of a 4th arch mesenchyme.") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000580") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "DOI:10.1046/j.1469-7580.2001.19910133.x Graham A. The development and evolution of the pharyngeal arches. J Anat (2001)"^^xsd:string) "In all vertebrates, the pharyngeal apparatus develops from a series of bulges found on the lateral surface of the head, the pharyngeal arches, which consist of a number of different embryonic cell types. Each arch has an external covering of ectoderm and inner covering of endoderm, and between these a mesenchymal filling of neural crest with a central core of mesoderm.[well established][VHOG]") AnnotationAssertion( "EHDAA2:0000098") AnnotationAssertion( "EMAPA:16772") AnnotationAssertion( "VHOG:0000580") AnnotationAssertion(Annotation( "VHOG:0000580") "4th pharyngeal arch mesenchyme derived from neural crest") AnnotationAssertion(Annotation( "EMAPA:16772") "mesenchyme derived from neural crest of mesenchyme of 4th arch") AnnotationAssertion( "neural crest derived arch 4 mesenchyme") AnnotationAssertion( "pharyngeal arch 4 mesenchyme from neural crest") AnnotationAssertion( "uberon") AnnotationAssertion( "branchial arch 4 mesenchyme from neural crest") AnnotationAssertion( "UBERON:0010256") AnnotationAssertion(rdfs:label "4th arch mesenchyme from neural crest") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (6th arch mesenchyme from neural crest) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "Mesenchyme that develops_from a neural crest and is part of a 6th arch mesenchyme.") AnnotationAssertion( "EHDAA2:0004077") AnnotationAssertion( "neural crest derived arch 6 mesenchyme") AnnotationAssertion( "pharyngeal arch 6 mesenchyme from neural crest") AnnotationAssertion( "uberon") AnnotationAssertion( "branchial arch 6 mesenchyme from neural crest") AnnotationAssertion( "UBERON:0010257") AnnotationAssertion(rdfs:label "6th arch mesenchyme from neural crest") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (mesenchyme from rhombencephalic neural crest) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "Mesenchyme that develops_from a rhombencephalon neural crest.") AnnotationAssertion( "EHDAA2:0004423") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010258") AnnotationAssertion(rdfs:label "mesenchyme from rhombencephalic neural crest") SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (1st arch mesenchyme from neural crest) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "Mesenchyme that develops_from a neural crest and is part of a 1st arch mesenchyme.") AnnotationAssertion( "EMAPA:16129") AnnotationAssertion(Annotation( "EMAPA:16129") "mesenchyme derived from neural crest of mesenchyme of 1st arch") AnnotationAssertion( "neural crest derived arch 1 mesenchyme") AnnotationAssertion( "pharyngeal arch 1 mesenchyme from neural crest") AnnotationAssertion( "uberon") AnnotationAssertion( "branchial arch 1 mesenchyme from neural crest") AnnotationAssertion( "UBERON:0010259") AnnotationAssertion(rdfs:label "1st arch mesenchyme from neural crest") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (umbilical blood vessel) AnnotationAssertion(Annotation( "MP:0003230") "One of the three blood vessels, usually one large umbilical vein and two small umbilical arteries, buried within Wharton's jelly, that transport blood to and from the placenta, where exchange between the mother and fetus takes place; the umbilical vein carries oxygenated, nutrient-rich blood from the placenta to the fetus, and the umbilical arteries carry deoxygenated, nutrient-depleted blood from the fetus to the placenta.") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:36493") AnnotationAssertion(Annotation( "Hymans:Hymans") "allantoic vessel") AnnotationAssertion( "umbilical cord blood vessel") AnnotationAssertion( "umbilical vessel") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "umbilical cord blood vessels") AnnotationAssertion( "umbilical vasculature") AnnotationAssertion( "UBERON:0010260") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "umbilical blood vessel") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) SubClassOf( ObjectSomeValuesFrom( )) # Class: (operculum of brain) AnnotationAssertion(Annotation( ) "The most posterior portion of the inferior frontal gyrus of the frontal lobe in the brain. In an axial plane, the Sylvian fissure extends from the operculum posteriorly to divide the frontal from the temporal lobe. Broca's area is a notable part of the operculum, which plays a key role in conversation or speech production, reading and writing. Its vascular supply comes from the M3 branches of the middle cerebral artery[WP].") AnnotationAssertion(Annotation( "HP:0100954") "operculum") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010262") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "operculum of brain") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/b/b3/Operculum.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete embryoid body) AnnotationAssertion(Annotation( ) Annotation( "BTO:0001718") "Embryoid bodies are structures resembling embryos, occurring in several types of germ cell tumors.") AnnotationAssertion( "BTO:0001718") AnnotationAssertion( ) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010263") AnnotationAssertion(rdfs:comment "Obsoled, as does not cover naturally occurring entity") AnnotationAssertion(rdfs:label "obsolete embryoid body") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete inferior reticular formation) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010267") AnnotationAssertion(rdfs:label "obsolete inferior reticular formation") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete superior reticular formation) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010268") AnnotationAssertion(rdfs:label "obsolete superior reticular formation") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (filum terminale internum) AnnotationAssertion( ) AnnotationAssertion( "FMA:256524") AnnotationAssertion(Annotation( "FMA:256524") "internal part of filum terminale") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010269") AnnotationAssertion(rdfs:label "filum terminale internum") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (filum terminale externum) AnnotationAssertion( ) AnnotationAssertion( "FMA:256526") AnnotationAssertion(Annotation( "FMA:256526") "external part of filum terminale") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010270") AnnotationAssertion(rdfs:label "filum terminale externum") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (hyoid apparatus) AnnotationAssertion(Annotation( ) "A group of bones comprised of hyoid body and two pairs of cornua (i.e. greater cornua and lesser cornua), and lies just below the tongue, above the thyroid cartilage.") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0000225") Annotation( "AAO"^^xsd:string) Annotation( "AAO:LAP"^^xsd:string) "Apparatus located in the floor of the mouth, under the mandibular arcade. The apparatus consists of a central corpus and four pairs of processes. This apparatus serves as the site of insertion for a variety of muscles associated with movements of the tongue and as the origin of the m. hyoglossus.[AAO]") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0000225") Annotation( "AAO"^^xsd:string) "relationship loss: part_of hyolaryngeal complex (AAO:0000226)[AAO]") AnnotationAssertion( "In most mammals, including humans, the hyoid apparatus is shaped like a horseshoe. However, in humans, some of the bones of the hyoid apparatus are fused into a single bone called os hyoideum. In other animals such as frogs, the hyoid apparatus has a hyoid body that is chiefly comprised of hyaline cartilage and two pairs of processes (i.e. alary process and the posteriolateral process).") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0000225") AnnotationAssertion( "AAO:0000682") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37600") AnnotationAssertion( "MA:0003037") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "apparatus hyobranchialis") AnnotationAssertion(Annotation( ) "apparatus hyoideus") AnnotationAssertion(Annotation( "AAO:0000225") "hyobranchial apparatus") AnnotationAssertion(Annotation( "AAO:0000225") "hyolingual system") AnnotationAssertion( "UBERON:0010272") AnnotationAssertion(rdfs:label "hyoid apparatus") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "AAO"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (zone of hyoid bone) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A zone of bone organ that is part of a hyoid bone.") AnnotationAssertion( ) AnnotationAssertion( "FMA:59494") AnnotationAssertion(Annotation( "FMA:59494") "hyoid bone zone") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010273") AnnotationAssertion(rdfs:label "zone of hyoid bone") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (space in vertebral column) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "Any anatomical space that is part of a vertebral column.") AnnotationAssertion( "AAO:0000700") AnnotationAssertion(Annotation( "AAO:0000700") "vertebral column opening") AnnotationAssertion( "vertebral conduit") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010276") AnnotationAssertion(rdfs:label "space in vertebral column") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (mesocardium) AnnotationAssertion(Annotation( ) "The part of the embryonic mesentery which connects the embryonic heart with the body wall in front and the foregut behind.") AnnotationAssertion( "consider merging with heart mesentery") AnnotationAssertion( "mesocardial") AnnotationAssertion( "EMAPA:16212") AnnotationAssertion( "MA:0000098") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "EMAPA:16212") "cardiac mesentery") AnnotationAssertion( "UBERON:0010277") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "mesocardium") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pericardial sinus) AnnotationAssertion(Annotation( ) "There are two Pericardial sinuses: transverse and oblique. The cul-de-sac enclosed between the limbs of the inverted U of the venous mesocardium lies behind the left atrium and is known as the oblique sinus. The passage between the venous and arterial mesocardiabi.e. , between the aorta and pulmonary artery in front and the superior vena cava behindbis termed the transverse sinus. Also, the sinus that forms in the pericardial cavity where the dorso-mesentary pericardium reside. Can be used to pass ligature during cardiac surgery.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "oblique pericardial") AnnotationAssertion(Annotation( ) "oblique pericardial sinus") AnnotationAssertion(Annotation( ) "oblique sinus") AnnotationAssertion(Annotation( ) "pericardial sinuses") AnnotationAssertion(Annotation( ) "transverse pericardial") AnnotationAssertion(Annotation( ) "transverse pericardial sinus") AnnotationAssertion( "UBERON:0010279") AnnotationAssertion(rdfs:label "pericardial sinus") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/7/7e/Gray489.png"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "FMA-abduced") ObjectSomeValuesFrom( )) SubClassOf(Annotation( "MA-abduced") ObjectSomeValuesFrom( )) # Class: (oblique pericardial sinus) AnnotationAssertion(Annotation( ) "The cul-de-sac enclosed between the limbs of the inverted U of the venous mesocardium lies behind the left atrium.[WP,unvetted].") AnnotationAssertion( ) AnnotationAssertion( "FMA:77133") AnnotationAssertion(Annotation( "FMA:77133") "oblique sinus of pericardial cavity") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010283") AnnotationAssertion(rdfs:label "oblique pericardial sinus") SubClassOf( ) # Class: (lacrimal punctum) AnnotationAssertion(Annotation( ) "A minute orifice on the summit of the papillae lacrimales, which is the commencement point of the lacrimal canaliculi.") AnnotationAssertion( "collect tears produced by the lacrimal glands") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:59365") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "lacrimal point") AnnotationAssertion(Annotation( ) Annotation( ) "lacrimal puncta") AnnotationAssertion(Annotation( ) Annotation( ) "puncta lacrimalia") AnnotationAssertion( "UBERON:0010284") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "lacrimal punctum") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/5/53/Gray895.png"^^xsd:anyURI) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (midbrain basal plate) AnnotationAssertion(Annotation( "ZFA:0000761") "Portion of tissue that is dorsolateral to the floor plate and part of the midbrain.") AnnotationAssertion( "DHBA:12322") AnnotationAssertion( "EFO:0003567") AnnotationAssertion( "EHDAA2:0004375") AnnotationAssertion( "TAO:0000761") AnnotationAssertion( "ZFA:0000761") AnnotationAssertion(Annotation( "TAO:0000761") "basal plate midbrain") AnnotationAssertion(Annotation( "ZFA:0000761") "basal plate midbrain region") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010285") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "midbrain basal plate") SubClassOf(Annotation( "EHDAA2"^^xsd:string) ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "ZFA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (midbrain neural tube) AnnotationAssertion(Annotation( "ZFA:0007039") "Portion of neural tube that gives rise to the midbrain.") AnnotationAssertion( "we follow ZFA in temporally dividing midbrain NT from presumptive midbrain, but in future this may be collapsed") AnnotationAssertion( "TAO:0007039") AnnotationAssertion( "ZFA:0007039") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010286") AnnotationAssertion(rdfs:label "midbrain neural tube") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "ZFA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (motor root of facial nerve) AnnotationAssertion( ) AnnotationAssertion( "DHBA:12863") AnnotationAssertion( "FMA:53419") AnnotationAssertion(Annotation( "FMA:53419") "facial nerve motor root") AnnotationAssertion( "motor component of the VIIth (facial) nerve") AnnotationAssertion(Annotation( "FMA:53419") "seventh cranial nerve motor root") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010287") AnnotationAssertion(rdfs:label "motor root of facial nerve") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf(Annotation( "Wikipedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (obsolete future medulla oblongata) AnnotationAssertion( "UBERON:0001896") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010288") AnnotationAssertion(rdfs:label "obsolete future medulla oblongata") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (layer of sclera) AnnotationAssertion( ) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010291") AnnotationAssertion(rdfs:label "layer of sclera") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "cjm"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (episcleral layer of eyeball) AnnotationAssertion(Annotation( ) "The episclera is the outermost layer of the sclera. It is composed of loose, fibrous, elastic tissue and attaches to Tenon's capsule. A vascular plexus is found between the conjunctiva and the sclera consisting of two layers of vessels, the superficial episcleral vessels and the deep episcleral vessels.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:58362") AnnotationAssertion( "NCIT:C12989") AnnotationAssertion(Annotation( "ncithesaurus:Episclera") "UMLS:C0229109") AnnotationAssertion(Annotation( "FMA:58362") "episclera") AnnotationAssertion(Annotation( "FMA:58362") "episcleral layer") AnnotationAssertion(Annotation( ) Annotation( ) "lamina episcleralis") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010292") AnnotationAssertion(rdfs:label "episcleral layer of eyeball") SubClassOf(Annotation( "Wikipedia"^^xsd:string) ) # Class: (suprachoroid lamina) AnnotationAssertion(Annotation( ) "On the external surface of the optic choroid is a thin membrane, the suprachoroid lamina, composed of delicate non-vascular lamellae-each lamella consisting of a network of fine elastic fibers among which are branched pigment cells.") AnnotationAssertion( "The spaces between the lamellae are lined by endothelium, and open freely into the perichoroidal lymph space, which, in its turn, communicates with the periscleral space by the perforations in the sclera through which the vessels and nerves are transmitted.") AnnotationAssertion(Annotation( "FMA"^^xsd:string) "FMA treats this as part of the sclera") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:58368") AnnotationAssertion(Annotation( ) Annotation( ) "lamina suprachorioidea") AnnotationAssertion(Annotation( ) Annotation( ) "lamina suprachoroidea") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "fusca sclerae") AnnotationAssertion(Annotation( "FMA:58368") "lamina fusca of sclera") AnnotationAssertion(Annotation( ) "lamina fusca sclerae") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) Annotation( ) "lamina fusca sclerae") AnnotationAssertion(Annotation( ) "lamina fusca scletae") AnnotationAssertion(Annotation( ) Annotation( ) "lamina suprachorioidea") AnnotationAssertion(Annotation( "FMA:58368") "suprachoroid lamina of sclera") AnnotationAssertion( "UBERON:0010293") AnnotationAssertion(rdfs:label "suprachoroid lamina") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (scleral endothelium) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An endothelium that is part of a sclera.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010294") AnnotationAssertion(rdfs:label "scleral endothelium") SubClassOf( ) SubClassOf(Annotation( "Wikipedia"^^xsd:string) ) SubClassOf( ) # Class: (substantia propria of sclera) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A stroma that is part of a sclera.") AnnotationAssertion( "subsantia propria") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:58365") AnnotationAssertion( "NCIT:C33652") AnnotationAssertion(Annotation( "ncithesaurus:Substantia_Propria") "UMLS:C1704397") AnnotationAssertion(Annotation( "FMA:58365") "scleral stroma") AnnotationAssertion(Annotation( "FMA:58365") "stroma of sclera") AnnotationAssertion(Annotation( "FMA:58365") "subsantia propria sclerae") AnnotationAssertion(Annotation( "FMA:58365") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "substantia propria sclerae") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010295") AnnotationAssertion(rdfs:label "substantia propria of sclera") SubClassOf( ) SubClassOf(Annotation( "Wikipedia"^^xsd:string) ) # Class: (scleral mesenchyme) AnnotationAssertion(Annotation( ) Annotation( ) "Mesenchyme surrounding the developing optic cup which develops into the sclera.") AnnotationAssertion( "The mesenchyme surrounding the developing optic cup differentiates into the sclera, the dense fibrous coat of the eye.. http://www.ncbi.nlm.nih.gov/pubmed/16496288") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010299") AnnotationAssertion(rdfs:label "scleral mesenchyme") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (epithelial scleral papilla layer) AnnotationAssertion( "Scleral papillae (which induce scleral ossicles in birds) have not been reported in teleosts, but evidence for their presence may not have been sought") AnnotationAssertion( "The scleral ossicles are of dermal (neural crest) origin, develop intramembranously within the scleral mesenchyme, and are induced to form by overlying (transient) epithelial scleral papillae (Nelson, 1942; Murray, 1943; Fyfe and Hall, 1981, 1983; Hall, 1981, 2005; Pinto and Hall, 1991)") AnnotationAssertion( "scleral papillae") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010300") AnnotationAssertion(rdfs:label "epithelial scleral papilla layer") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (extraembryonic epithelium) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An epithelium that is part of a extraembryonic structure.") AnnotationAssertion( "extra-embryonic epithelium") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010303") AnnotationAssertion(rdfs:label "extraembryonic epithelium") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (non-keratinized stratified squamous epithelium) AnnotationAssertion(Annotation( ) Annotation( "FMA:45569") "Stratified squamous epithelium is a stratified squamous epithelium, the cells of which synthesizes but does not accumulate keratin. Examples: epithelium of vagina, epithelium of wall of esophagus.") AnnotationAssertion( ) AnnotationAssertion( "FMA:45569") AnnotationAssertion(Annotation( "FMA:45569") "epithelium stratificatum squamosum noncornificatum") AnnotationAssertion(Annotation( "FMA:45569") "nonkeratinizing stratified squamous epithelium") AnnotationAssertion(Annotation( ) "stratified squamous non-keratinized epithelium") AnnotationAssertion(Annotation( ) "stratified squamous nonkeratinizing epithelium") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010304") AnnotationAssertion(rdfs:label "non-keratinized stratified squamous epithelium") SubClassOf(Annotation( "FMA"^^xsd:string) ) DisjointClasses( ) # Class: (subdivision of conjunctiva) AnnotationAssertion(Annotation( ) "One of the three major regions of the conjunctiva.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:59023") AnnotationAssertion( "conjunctiva region") AnnotationAssertion(Annotation( "FMA:59023") "region of conjunctiva") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010305") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "subdivision of conjunctiva") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (bulbar conjunctiva) AnnotationAssertion(Annotation( "MP:0013402") "The conjunctiva covering the anterior surface of the sclera and the surface epithelium of the cornea.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:59024") AnnotationAssertion( "NCIT:C12902") AnnotationAssertion(Annotation( "ncithesaurus:Bulbar_Conjunctiva") "UMLS:C0229275") AnnotationAssertion(Annotation( ) "ocular conjunctiva") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010306") AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "covers the eyeball, over the sclera. This region of the conjunctiva is tightly bound to the underlying sclera by Tenon's capsule and moves with the eyeball movements.") AnnotationAssertion(rdfs:label "bulbar conjunctiva") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (conjunctival fornix) AnnotationAssertion(Annotation( "MGI:anna"^^xsd:string) "The space formed by the junction of the bulbar and palpebral portions of the conjunctiva, that of the upper lid being the superior conjunctival fornix (fornix conjunctivae superior) and that of the lower lid, the inferior conjunctival fornix (fornix conjunctivae inferior); the fornix is loose and flexible, allowing the free movement of the lids and eyeball.") AnnotationAssertion( "It is loose and flexible, allowing the free movement of the lids and eyeball") AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37834") AnnotationAssertion( "FMA:59016") AnnotationAssertion(Annotation( "MGI:anna"^^xsd:string) "conjunctiva fornix") AnnotationAssertion(Annotation( "MGI:anna"^^xsd:string) "forniceal conjunctiva") AnnotationAssertion(Annotation( ) Annotation( ) "fornix conjunctiva") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010307") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "conjunctival fornix") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (immature eye) AnnotationAssertion(Annotation( "ZFA:0001678") "Developing anatomical structure that develops into the eyeball and associated structures.") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0002201") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "Multi-tissue structure that consists of the structures that develop into the retina and lens.[TAO]") AnnotationAssertion( "TAO:0002201") AnnotationAssertion( "ZFA:0001678") AnnotationAssertion( "future eye") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010312") AnnotationAssertion(rdfs:label "immature eye") SubClassOf( ) SubClassOf(Annotation( "definitional"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (neural crest-derived structure) AnnotationAssertion(Annotation( ) "An anatomical structure that develops from the neural crest.") AnnotationAssertion( "Grouping term for query purposes") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010313") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "neural crest-derived structure") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (structure with developmental contribution from neural crest) AnnotationAssertion(Annotation( ) "An anatomical structure that has some part that develops from the neural crest.") AnnotationAssertion( "Grouping term for query purposes") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010314") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "structure with developmental contribution from neural crest") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (germ layer / neural crest) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010316") AnnotationAssertion(rdfs:label "germ layer / neural crest") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete germ layer / neural crest derived structure) AnnotationAssertion( "UBERON:0000923") AnnotationAssertion( "UBERON:0010313") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010317") AnnotationAssertion(rdfs:comment "Grouping term for query purposes") AnnotationAssertion(rdfs:label "obsolete germ layer / neural crest derived structure") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (skeletal element of eye region) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A skeletal element that is part of a orbital region.") AnnotationAssertion( "uberon") AnnotationAssertion( "eye skeleton") AnnotationAssertion( "ocular skeleton") AnnotationAssertion( "skeletal element of orbital region") AnnotationAssertion( "UBERON:0010321") AnnotationAssertion(rdfs:label "skeletal element of eye region") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (cranial skeletal system) AnnotationAssertion(Annotation( ) Annotation( "GO_REF:0000034"^^xsd:string) Annotation( "PSPUB:0000170"^^xsd:string) Annotation( "VSAO:0000049") "Skeletal subdivision of the head including skull (cranium plus mandible), pharyngeal and/or hyoid apparatus.") AnnotationAssertion( "we use 'cranial skeletal system', so that we can include the skull, which has joints/sutures as parts (recall, we follow FMA in distinguishing between the skeleton and skeletal system - only the latter includes joints)") AnnotationAssertion( "that the cranial skeleton includes the pharyngeal arch skeleton. It is thus more inclusive that the cranium itself, and extends beyond the head in tetrapods. The AAO class called 'skull' belongs here, as it includes the whole splanchnocranium") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0000109") Annotation( "AAO"^^xsd:string) Annotation( "AAO:LAP"^^xsd:string) "Bony structure that encases the central nervous system and the primary sense organs of sight, olfaction, hearing, and equilibrium.[AAO]") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0000737") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "Skeletal system which is part of the skull, including the splanchnocranium, chondrocranium, and dermatocranium.[TAO]") AnnotationAssertion( "AAO:0000109") AnnotationAssertion( "AAO:0000971") AnnotationAssertion( "AAO:0010185") AnnotationAssertion( "TAO:0000737") AnnotationAssertion( "VSAO:0000049") AnnotationAssertion( "XAO:0003075") AnnotationAssertion( "ZFA:0000737") AnnotationAssertion( "cranial skeleton") AnnotationAssertion( "osteocranium") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "ZFA:0000737") Annotation( ) "cranium") AnnotationAssertion( "UBERON:0010323") AnnotationAssertion(rdfs:label "cranial skeletal system") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete craniofacial region) AnnotationAssertion( "UBERON:0001456") AnnotationAssertion( "VSAO:0000083") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010324") AnnotationAssertion(rdfs:label "obsolete craniofacial region") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete craniofacial skeleton) AnnotationAssertion(Annotation( "VSAO:0000082") "Cranial skeleton derived from neural crest cells.") AnnotationAssertion( "UBERON:0011156") AnnotationAssertion( "VSAO:0000082") AnnotationAssertion(Annotation( "VSAO:curator"^^xsd:string) "Cranio-facial skeleton") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010325") AnnotationAssertion(rdfs:label "obsolete craniofacial skeleton") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete early digestive tract associated mesenchyme) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010327") AnnotationAssertion(rdfs:label "obsolete early digestive tract associated mesenchyme") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (limb bud mesenchyme) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "Mesenchyme that is part of a limb bud.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010328") AnnotationAssertion(rdfs:label "limb bud mesenchyme") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (paired limb/fin bud mesenchyme) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "Mesenchyme that is part of a limb/fin bud.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010329") AnnotationAssertion(rdfs:label "paired limb/fin bud mesenchyme") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2-abduced") ObjectSomeValuesFrom( )) # Class: (eyelid mesenchyme) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "Mesenchyme that is part of a developing eyelid.") AnnotationAssertion( "EMAPA:32759") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010330") AnnotationAssertion(rdfs:label "eyelid mesenchyme") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (epithelium of handplate) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An epithelium that is part of a handplate.") AnnotationAssertion( "EHDAA2:0000730") AnnotationAssertion( "EMAPA:32630") AnnotationAssertion(Annotation( "EHDAA2:0000730") "handplate epithelium") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010332") AnnotationAssertion(rdfs:label "epithelium of handplate") SubClassOf(Annotation( "EHDAA2"^^xsd:string) ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (extraembryonic membrane mesenchyme) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "Mesenchyme that is part of a extraembryonic membrane.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010333") AnnotationAssertion(rdfs:label "extraembryonic membrane mesenchyme") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2-abduced") ObjectSomeValuesFrom( )) # Class: (maxillary process mesenchyme from neural crest) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "Mesenchyme that develops_from a neural crest and is part of a maxillary process mesenchyme.") AnnotationAssertion( "EHDAA2:0004601") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010334") AnnotationAssertion(rdfs:label "maxillary process mesenchyme from neural crest") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (maxillary process mesenchyme from head mesenchyme) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "Mesenchyme that develops_from a head mesenchyme from mesoderm and is part of a maxillary process mesenchyme.") AnnotationAssertion( "EHDAA2:0004602") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010335") AnnotationAssertion(rdfs:label "maxillary process mesenchyme from head mesenchyme") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (mandibular process mesenchyme from neural crest) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "Mesenchyme that develops_from a neural crest and is part of a mandibular process mesenchyme.") AnnotationAssertion( "EHDAA2:0004603") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010336") AnnotationAssertion(rdfs:label "mandibular process mesenchyme from neural crest") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (mandibular process mesenchyme from head mesenchyme) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "Mesenchyme that develops_from a head mesenchyme from mesoderm and is part of a mandibular process mesenchyme.") AnnotationAssertion( "EHDAA2:0004604") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010337") AnnotationAssertion(rdfs:label "mandibular process mesenchyme from head mesenchyme") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (1st arch maxillary mesenchyme from head mesenchyme) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "Mesenchyme that develops_from a head mesenchyme from mesoderm and is part of a 1st arch maxillary mesenchyme.") AnnotationAssertion( "EHDAA2:0000043") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010338") AnnotationAssertion(rdfs:label "1st arch maxillary mesenchyme from head mesenchyme") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (1st arch mandibular mesenchyme from head mesenchyme) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "Mesenchyme that develops_from a head mesenchyme from mesoderm and is part of a 1st arch mandibular mesenchyme.") AnnotationAssertion( "EHDAA2:0000036") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010339") AnnotationAssertion(rdfs:label "1st arch mandibular mesenchyme from head mesenchyme") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (1st arch mesenchyme from head mesenchyme) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "Mesenchyme that develops_from a head mesenchyme from mesoderm and is part of a 1st arch mesenchyme.") AnnotationAssertion( "EMAPA:16130") AnnotationAssertion(Annotation( "EMAPA:16130") "mesenchyme derived from head mesoderm of mesenchyme of 1st arch") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010341") AnnotationAssertion(rdfs:label "1st arch mesenchyme from head mesenchyme") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "EMAPA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (2nd arch mesenchyme from head mesenchyme) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "Mesenchyme that develops_from a head mesenchyme from mesoderm and is part of a 2nd arch mesenchyme.") AnnotationAssertion( "EHDAA2:0000067") AnnotationAssertion( "EMAPA:16280") AnnotationAssertion( "head mesenchyme derived arch 2 mesenchyme") AnnotationAssertion(Annotation( "EMAPA:16280") "mesenchyme derived from head mesoderm of mesenchyme of 2nd arch") AnnotationAssertion( "pharyngeal arch 2 mesenchyme from head mesenchyme") AnnotationAssertion( "uberon") AnnotationAssertion( "branchial arch 2 mesenchyme from head mesenchyme") AnnotationAssertion( "UBERON:0010343") AnnotationAssertion(rdfs:label "2nd arch mesenchyme from head mesenchyme") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (3rd arch mesenchyme from head mesenchyme) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "Mesenchyme that develops_from a head mesenchyme from mesoderm and is part of a 3rd arch mesenchyme.") AnnotationAssertion( "EHDAA2:0000082") AnnotationAssertion( "EMAPA:16403") AnnotationAssertion( "head mesenchyme derived arch 3 mesenchyme") AnnotationAssertion(Annotation( "EMAPA:16403") "mesenchyme derived from head mesoderm of mesenchyme of 3rd arch") AnnotationAssertion( "pharyngeal arch 3 mesenchyme from head mesenchyme") AnnotationAssertion( "uberon") AnnotationAssertion( "branchial arch 3 mesenchyme from head mesenchyme") AnnotationAssertion( "UBERON:0010344") AnnotationAssertion(rdfs:label "3rd arch mesenchyme from head mesenchyme") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (4th arch mesenchyme from head mesenchyme) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "Mesenchyme that develops_from a head mesenchyme from mesoderm and is part of a 4th arch mesenchyme.") AnnotationAssertion( "EHDAA2:0000097") AnnotationAssertion( "EMAPA:16771") AnnotationAssertion( "head mesenchyme derived arch 4 mesenchyme") AnnotationAssertion(Annotation( "EMAPA:16771") "mesenchyme derived from head mesoderm of mesenchyme of 4th arch") AnnotationAssertion( "pharyngeal arch 4 mesenchyme from head mesenchyme") AnnotationAssertion( "uberon") AnnotationAssertion( "branchial arch 4 mesenchyme from head mesenchyme") AnnotationAssertion( "UBERON:0010345") AnnotationAssertion(rdfs:label "4th arch mesenchyme from head mesenchyme") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (6th arch mesenchyme from head mesenchyme) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "Mesenchyme that develops_from a head mesenchyme from mesoderm and is part of a 6th arch mesenchyme.") AnnotationAssertion( "EHDAA2:0004078") AnnotationAssertion( "head mesenchyme derived arch 6 mesenchyme") AnnotationAssertion( "pharyngeal arch 6 mesenchyme from head mesenchyme") AnnotationAssertion( "uberon") AnnotationAssertion( "branchial arch 6 mesenchyme from head mesenchyme") AnnotationAssertion( "UBERON:0010347") AnnotationAssertion(rdfs:label "6th arch mesenchyme from head mesenchyme") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (hyoid pre-muscle mass) AnnotationAssertion( "EHDAA2:0000795") AnnotationAssertion( "uberon") AnnotationAssertion( "hyoid muscle plate") AnnotationAssertion( "UBERON:0010348") AnnotationAssertion(rdfs:label "hyoid pre-muscle mass") SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ) SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (otic capsule pre-cartilage condensation) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An otic capsule endochondral element that is composed primarily of a pre-cartilage condensation.") AnnotationAssertion( "EHDAA2:0000833") AnnotationAssertion( "otic capsule anlage") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010349") AnnotationAssertion(rdfs:label "otic capsule pre-cartilage condensation") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (Reichert's cartilage pre-cartilage condensation) AnnotationAssertion( "EMAPA:17351") AnnotationAssertion( "future Reichert's cartilage") AnnotationAssertion(Annotation( "EMAPA:17351") "hyoid cartilage pre-cartilage condensation") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010354") AnnotationAssertion(rdfs:label "Reichert's cartilage pre-cartilage condensation") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (ossification center) AnnotationAssertion(Annotation( ) "The first step in ossification of the cartilage is that the cartilage cells, at the point where ossification is commencing and which is termed a ossification center, enlarge and arrange themselves in rows. The matrix in which they are imbedded increases in quantity, so that the cells become further separated from each other. A deposit of calcareous material now takes place in this matrix, between the rows of cells, so that they become separated from each other by longitudinal columns of calcified matrix, presenting a granular and opaque appearance. Here and there the matrix between two cells of the same row also becomes calcified, and transverse bars of calcified substance stretch across from one calcareous column to another. Thus there are longitudinal groups of the cartilage cells enclosed in oblong cavities, the walls of which are formed of calcified matrix which cuts off all nutrition from the cells; the cells, in consequence, atrophy, leaving spaces called the primary areolC&.") AnnotationAssertion( "currently classified as a zone of a bone organ, but exists prior to bone ossifying") AnnotationAssertion( ) AnnotationAssertion( "FMA:75436") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) Annotation( ) "centrum ossificationis") AnnotationAssertion(Annotation( "FMA:75436") "ossification centre") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "center of ossification") AnnotationAssertion(Annotation( ) Annotation( ) "centrum ossificationis") AnnotationAssertion( "UBERON:0010355") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "ossification center") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/f/fd/Gray79.png"^^xsd:anyURI) SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (primary ossification center) AnnotationAssertion(Annotation( ) "A primary ossification center is the first area of a bone to start ossifying. It usually appears during prenatal development in the central part of each developing bone. In long bones the primary centers occur in the diaphysis/shaft and in irregular bones the primary centers occur usually in the body of the bone. Most bones have only one primary center (e.g. all long bones) but some irregular bones such as the os coxa (hip) and vertebrae have multiple primary centers.") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) "primarium") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:75447") AnnotationAssertion( "NCIT:C34263") AnnotationAssertion(Annotation( "ncithesaurus:Primary_Ossification_Center") "UMLS:C1184750") AnnotationAssertion(Annotation( "NominaAnatomica:NA") Annotation( ) "centrum ossificationis primarium") AnnotationAssertion(Annotation( "FMA:75447") "primary ossification centre") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010356") AnnotationAssertion(rdfs:label "primary ossification center") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (secondary ossification center) AnnotationAssertion(Annotation( ) "A secondary ossification center is the area of ossification that appears after the primary ossification center has already appeared - most of which appear during the postnatal and adolescent years. Most bones have more than one secondary ossification center. In long bones, the secondary centres appear in the epiphyses.") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) "secundarium") AnnotationAssertion( ) AnnotationAssertion( "FMA:75448") AnnotationAssertion(Annotation( "NominaAnatomica:NA") Annotation( ) "centrum ossificationis secundarium") AnnotationAssertion(Annotation( "FMA:75448") "secondary ossification centre") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010357") AnnotationAssertion(rdfs:label "secondary ossification center") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (arch of centrum of vertebra) AnnotationAssertion(Annotation( ) "An arch-shaped structure of the vertebra that extends dorsally (neural arch) or ventrally (hemal arch) from the vertebral centrum.") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001670") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0030223693 Liem KF, Bemis WE, Walker WF, Grande L, Functional Anatomy of the Vertebrates: An Evolutionary Perspective (2001) p.270") "(...) certain common components [of vertebral structure] are found in nearly all vertebrate. A representative vertebra has a vertebral arch or neural arch, which extends dorsally around the spinal cord.[well established][VHOG]") AnnotationAssertion(Annotation( "FMA"^^xsd:string) "Note that humans do not have hemal arches, so VA=NA for FMA") AnnotationAssertion( "EMAPA:36614") AnnotationAssertion( "FMA:11946") AnnotationAssertion(Annotation( "FMA:11946") "arch of vertebra") AnnotationAssertion(Annotation( "FMA:11946") "arcus vertebrae (vertebralis)") AnnotationAssertion(Annotation( "MA:0001453") "vertebra arch") AnnotationAssertion(Annotation( "FMA:11946") "vertebral arch") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010358") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "arch of centrum of vertebra") SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (pharyngeal arch mesenchyme from neural crest) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "Mesenchyme that develops_from a neural crest and is part of a entire pharyngeal arch associated mesenchyme.") AnnotationAssertion( "arch mesenchyme from neural crest") AnnotationAssertion( "branchial arch mesenchyme from neural crest") AnnotationAssertion( "neural crest derived arch mesenchyme") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010359") AnnotationAssertion(rdfs:comment "Partially implements https://github.com/obophenotype/uberon/wiki/The-neural-crest NC meeting scheme") AnnotationAssertion(rdfs:label "pharyngeal arch mesenchyme from neural crest") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pharyngeal arch mesenchyme from head mesenchyme) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "Mesenchyme that develops_from a head mesenchyme from mesoderm and is part of a entire pharyngeal arch associated mesenchyme.") AnnotationAssertion( "arch mesenchyme from head mesenchyme") AnnotationAssertion( "branchial arch mesenchyme from head mesenchyme") AnnotationAssertion( "head mesenchyme derived arch mesenchyme") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010360") AnnotationAssertion(rdfs:comment "Partially implements https://github.com/obophenotype/uberon/wiki/The-neural-crest NC meeting scheme") AnnotationAssertion(rdfs:label "pharyngeal arch mesenchyme from head mesenchyme") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (synostosis) AnnotationAssertion(Annotation( "FMA:7499") "Nonsynovial joint in which the articulating bones are connected by bone. Examples: epiphyseal junction, manubriosternal synostosis.") AnnotationAssertion( ) AnnotationAssertion( "FMA:7499") AnnotationAssertion( "ZFA:0005610") AnnotationAssertion(Annotation( "FMA:7499") "bony union") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) Annotation( ) "junctura ossea") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010361") AnnotationAssertion(rdfs:label "synostosis") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (endoskeleton) AnnotationAssertion(Annotation( ) Annotation( "GO_REF:0000034"^^xsd:string) Annotation( "PSPUB:0000170"^^xsd:string) Annotation( "VSAO:0000037") "Skeletal subdivision that undergoes indirect development and includes elements that develop as a replacement or substitution of other elements or tissues.") AnnotationAssertion(Annotation( ) "An endoskeleton is an internal support structure of an animal, composed of mineralized tissue. Endoskeleton develops within the skin or in the deeper body tissues. The vertebrate is basically an endoskeleton made up of two types of tissues (bone and cartilage). During early embryonic development the endoskeleton is composed of notochord and cartilage. The notochord in most vertebrates is replaced by vertebral column and cartilage is replaced by bone in most adults. In three phyla and one subclass of animals, endoskeletons of various complexity are found: Chordata, Echinodermata, Porifera, and Coleoidea. An endoskeleton may function purely for support (as in the case of sponges), but often serves as an attachment site for muscle and a mechanism for transmitting muscular forces. A true endoskeleton is derived from mesodermal tissue. Such a skeleton is present in echinoderms and chordates. The poriferan 'skeleton' consists of microscopic calcareous or siliceous spicules or a spongin network. The Coleoidae do not have a true endoskeleton in the evolutionary sense; here, a mollusk exoskeleton evolved into several sorts of internal structure, the 'cuttlebone' of cuttlefish being the best-known version. Yet they do have cartilaginous tissue in their body, even if it is not mineralized, especially in the head, where it forms a primitive cranium. The endoskeleton gives shape,support and protection to the body and provides a mean of locomotion.[Wikipedia:Endoskeleton]t") AnnotationAssertion( ) AnnotationAssertion( "VSAO:0000037") AnnotationAssertion( "XAO:0004026") AnnotationAssertion(Annotation( "VSAO:curator"^^xsd:string) "replacement skeleton") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010362") AnnotationAssertion(rdfs:label "endoskeleton") SubClassOf(Annotation( "VSAO"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (endochondral element) AnnotationAssertion(Annotation( ) Annotation( "GO_REF:0000034"^^xsd:string) Annotation( "PSPUB:0000170"^^xsd:string) Annotation( "VSAO:0000139") "A skeletal element that has the potential to participate in endochondral ossification, and may participate in intramembranous ossification.") AnnotationAssertion( "VSAO:0000139") AnnotationAssertion( "XAO:0004017") AnnotationAssertion( "ZFA:0005620") AnnotationAssertion(Annotation( "VSAO:0000139") "endochondral replacement element") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010363") AnnotationAssertion(rdfs:label "endochondral element") AnnotationAssertion(rdfs:seeAlso "https://github.com/obophenotype/uberon/wiki/Modeling-endochondral-elements-Design-Pattern"^^xsd:anyURI) SubClassOf(Annotation( "VSAO"^^xsd:string) ) # Class: (dermal skeleton) AnnotationAssertion(Annotation( ) Annotation( "GO_REF:0000034"^^xsd:string) Annotation( "PSPUB:0000170"^^xsd:string) Annotation( "VSAO:0000035") "Skeletal subdivision that undergoes direct development and includes elements that either develop in association with the basement membrane of the ectoderm or are homologous with such elements; includes dermatocranium, components of the appendicular skeleton, teeth and tooth-like elements of the oropharynx, and integumentary elements.") AnnotationAssertion(Annotation( "VSAO:curator"^^xsd:string) Annotation( ) "exoskeleton") AnnotationAssertion( "VSAO:0000035") AnnotationAssertion( "XAO:0004025") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "VSAO:curator"^^xsd:string) "dermal skeletal system") AnnotationAssertion(Annotation( "VSAO:curator"^^xsd:string) "dermoskeleton") AnnotationAssertion(Annotation( "VSAO:curator"^^xsd:string) "desmoskeleton") AnnotationAssertion( "UBERON:0010364") AnnotationAssertion(rdfs:comment "This ontology covers metazoa, so we do not use exoskeleton as primary label, as in VSAO") AnnotationAssertion(rdfs:label "dermal skeleton") SubClassOf(Annotation( "VSAO"^^xsd:string) ) # Class: (odontoid tissue) AnnotationAssertion(Annotation( ) Annotation( "GO_REF:0000034"^^xsd:string) Annotation( "PSPUB:0000170"^^xsd:string) Annotation( "VSAO:0000063") "Skeletal tissue that is part of the exoskeleton and derived from an odontogenic papilla.") AnnotationAssertion( "in many vertebrates, odontoid tissue is not restricted to the teeth") AnnotationAssertion(Annotation( "FMA"^^xsd:string) "Classified as a portion of organism substance in FMA") AnnotationAssertion( "UBERON:0001973") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:35872") AnnotationAssertion( "FMA:63001") AnnotationAssertion( "MA:0002540") AnnotationAssertion( "NCIT:C33794") AnnotationAssertion(Annotation( "ncithesaurus:Tooth_Tissue") "UMLS:C1519551") AnnotationAssertion( "VSAO:0000063") AnnotationAssertion( "XAO:0004046") AnnotationAssertion( "ZFA:0005623") AnnotationAssertion(Annotation( "VSAO:curator"^^xsd:string) "odontogenic tissue") AnnotationAssertion(Annotation( "FMA:63001") "portion of substance of tooth") AnnotationAssertion(Annotation( "FMA:63001") "substance of tooth") AnnotationAssertion(Annotation( "MA:0002540") "tooth substance") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "VSAO:curator"^^xsd:string) "dental tissue") AnnotationAssertion(Annotation( "VT:0003930") "tooth hard tissue") AnnotationAssertion( "tooth tissue") AnnotationAssertion( "UBERON:0010365") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "odontoid tissue") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (conjunctival vasculature) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A vasculature that is part of a conjunctiva.") AnnotationAssertion( "FMA:70887") AnnotationAssertion(Annotation( "FMA:70887") "conjunctival veins") AnnotationAssertion(Annotation( "FMA:70887") "conjunctival veins set") AnnotationAssertion(Annotation( "FMA:70887") "set of conjunctival veins") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) Annotation( ) "venae conjunctivales") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010366") AnnotationAssertion(rdfs:label "conjunctival vasculature") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (conjunctival vein) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A vein that is part of a conjunctiva.") AnnotationAssertion( "conjunctival blood vessel") AnnotationAssertion( ) AnnotationAssertion( "FMA:70887") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010367") AnnotationAssertion(rdfs:label "conjunctival vein") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pulmonary lobule) AnnotationAssertion(Annotation( "ncithesaurus:Pulmonary_Lobule") "The smallest anatomical unit of the lung, measuring 0.50 to 2.00 cm in diameter. Each lobule is composed of 4-8 terminal bronchioles and their distal alveolar ducts and sacs. The lobules are separated by fibrous interlobular septa.") AnnotationAssertion( "FMA:75739") AnnotationAssertion( "NCIT:C33428") AnnotationAssertion(Annotation( "FMA:75739") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "lobulus pulmonis") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010368") AnnotationAssertion(rdfs:label "pulmonary lobule") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (secondary pulmonary lobule) AnnotationAssertion(Annotation( ) "A unit of lung supplied by three to five terminal bronchioles and contained by fibrous septa.") AnnotationAssertion(Annotation( ) "a pyramidal mass of lung tissue with sides that are bounded by the incomplete interlobular connective tissue septa and with a base, which is 1-2 cm in diameter, which usually faces the pleural surface of the lung; lobules that occupy a more central position in the lung are not well defined and are considered to consist of three to five pulmonary acini with proximate terminal bronchioles.") AnnotationAssertion( "FMA:7414") AnnotationAssertion(Annotation( "FMA:7414") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "lobulus pulmonis secondarius") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010369") AnnotationAssertion(rdfs:label "secondary pulmonary lobule") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (tibial vein) AnnotationAssertion(Annotation( ) "One of the veins of the lower leg; empty into the popliteal vein.") AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37199") AnnotationAssertion( "MA:0002243") AnnotationAssertion( "NCIT:C33787") AnnotationAssertion(Annotation( "ncithesaurus:Tibial_Vein") "UMLS:C0447138") AnnotationAssertion( "vena tibialis") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010370") AnnotationAssertion(rdfs:label "tibial vein") SubClassOf(Annotation( "MA"^^xsd:string) ) SubClassOf( ) # Class: (ecto-epithelium) AnnotationAssertion(Annotation( "FMA:69064") "Epithelium composed of cells that develops from the ectoderm[FMA,modified].") AnnotationAssertion( "FMA:69064") AnnotationAssertion( "ectoderm-derived epithelium") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010371") AnnotationAssertion(rdfs:label "ecto-epithelium") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (uncinate process of ethmoid) AnnotationAssertion(Annotation( ) "In the ethmoid bone, a curved lamina, the uncinate process, projects downward and backward from this part of the labyrinth; it forms a small part of the medial wall of the maxillary sinus, and articulates with the ethmoidal process of the inferior nasal concha.") AnnotationAssertion(Annotation( ) "uncinate process") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:57455") AnnotationAssertion(Annotation( ) "uncinate process of the ethmoid") AnnotationAssertion(Annotation( ) "uncinate process of the ethmoid bone") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "processus uncinatus") AnnotationAssertion(Annotation( ) Annotation( ) "processus uncinatus ossis ethmoidalis") AnnotationAssertion( "UBERON:0010372") AnnotationAssertion(rdfs:label "uncinate process of ethmoid") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/c/ce/Processus_uncinatus_ossis_ethmoidalis.PNG"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses( ) # Class: (uncinate process of pancreas) AnnotationAssertion(Annotation( ) "In the head of the pancreas, the angle of junction of the lower and left lateral borders forms a prolongation, termed the uncinate process. During the embryonic development of the distal foregut, the duodenum c-shape is formed while rotating the ventral pancreatic bud into the dorsal bud. The dorsal and ventral pancreatic buds fuse. The dorsal pancreatic bud becomes the body, tail, and isthmus of the pancreas and the ventral pancreatic bud forms the pancreatic head and uncinate process[WP].") AnnotationAssertion(Annotation( ) "processus uncinatus") AnnotationAssertion(Annotation( "EMAPA:17509") "uncinate process") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:17509") AnnotationAssertion( "FMA:15857") AnnotationAssertion( "NCIT:C62432") AnnotationAssertion(Annotation( "ncithesaurus:Uncinate_Pancreas") "UMLS:C0227580") AnnotationAssertion(Annotation( "FMA:15857") "Winslow's pancreas") AnnotationAssertion(Annotation( "FMA:15857") "lesser pancreas") AnnotationAssertion(Annotation( "FMA:15857") "processus uncinatus (pancreas)") AnnotationAssertion(Annotation( ) Annotation( ) "processus uncinatus pancreatis") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010373") AnnotationAssertion(rdfs:label "uncinate process of pancreas") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/f/fe/Illu_pancreas_duodenum.jpg"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "Wikipedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (pancreas dorsal primordium) AnnotationAssertion( "consider merging with dorsal pancreatic bud. Starts at CS12 in human (EHDAA2, embryology.ch 'bud anlagen')") AnnotationAssertion( "EHDAA2:0001384") AnnotationAssertion( "FMA:79793") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:79793") Annotation( ) "dorsal pancreas") AnnotationAssertion( "UBERON:0010375") AnnotationAssertion(rdfs:label "pancreas dorsal primordium") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pancreas ventral primordium) AnnotationAssertion( "Starts at CS14 in human (EHDAA2) or CS13-14 (embryology.ch 'bud anlagen')") AnnotationAssertion( "EHDAA2:0001387") AnnotationAssertion( "FMA:79794") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:79794") Annotation( ) "ventral pancreas") AnnotationAssertion( "UBERON:0010376") AnnotationAssertion(rdfs:label "pancreas ventral primordium") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (mesenchyme from somatopleure) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "Mesenchyme that develops_from a somatopleure.") AnnotationAssertion( "the way this class is defined also includes extraembryonic mesenchyme such as the amniotic mesenchyme; in future this may be restricted to embryonic derivatives") AnnotationAssertion( "EHDAA2:0001120") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010377") AnnotationAssertion(rdfs:label "mesenchyme from somatopleure") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (mesenchyme from splanchnopleure) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "Mesenchyme that develops_from a splanchnopleure.") AnnotationAssertion( "EHDAA2:0001122") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010378") AnnotationAssertion(rdfs:label "mesenchyme from splanchnopleure") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (superior tarsal muscle) AnnotationAssertion(Annotation( ) "The superior tarsal muscle is a smooth muscle adjoining the levator palpebrae superioris muscle that helps to raise the upper eyelid.") AnnotationAssertion( "declaring this to be both smooth muscle and part of the LPS leads to a disjointness violation (smooth muscle and striated muscle)") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:49058") AnnotationAssertion(Annotation( "FMA:49058") "Mueller's muscle") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "Muller's muscle") AnnotationAssertion(Annotation( ) "Müller's muscle") AnnotationAssertion(Annotation( ) "mueller muscle") AnnotationAssertion(Annotation( ) Annotation( ) "musculus tarsalis superior") AnnotationAssertion(Annotation( ) "the superior tarsal muscle") AnnotationAssertion( "UBERON:0010379") AnnotationAssertion(rdfs:label "superior tarsal muscle") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/6/6f/Gray894.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "underside of levator palpebrae superioris") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (enteric nerve) AnnotationAssertion(Annotation( "MGI:csmith"^^xsd:string) Annotation( "MP:0001046") "The neurons that innervate the esophagus, stomach, small and large bowel.") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37479") AnnotationAssertion( "MA:0001145") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010380") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "enteric nerve") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lumen of laryngopharynx) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An anatomical space that is enclosed by a hypopharynx.") AnnotationAssertion( "FMA:55096") AnnotationAssertion(Annotation( "FMA:55096") "laryngopharynx lumen") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010384") AnnotationAssertion(rdfs:label "lumen of laryngopharynx") SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (Peyer's patch follicle) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A lymphoid follicle that is part of a Peyer's patch.") AnnotationAssertion( "MA:0000732") AnnotationAssertion(Annotation( "MA:0000732") "Peyer's patch follicle") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010386") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "Peyer's patch follicle") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (Peyer's patch T cell area) AnnotationAssertion(Annotation( "MP:0002392") "The Peyer's patch area normally occupied by T lymphocytes.") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37939") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010387") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "Peyer's patch T cell area") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (proximal segment of rib) AnnotationAssertion(Annotation( ) Annotation( "MP:0000152") "The segment of the rib that connects to a vertebra[MP]. a small part of the rib composed of the head, neck, tuberculum and a short proximal part of the body[PMID].") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37495") AnnotationAssertion( "MA:0001400") AnnotationAssertion( "MA:0001414") AnnotationAssertion(Annotation( ) "proximal part of rib") AnnotationAssertion(Annotation( "MA:0001400") "proximal rib") AnnotationAssertion( "proximal rib segment") AnnotationAssertion( "uberon") AnnotationAssertion( "costal part of rib") AnnotationAssertion( "vertebral part of rib") AnnotationAssertion( "UBERON:0010388") AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "The proximal rib derives from the caudal half of somite[PMID:15906248]") AnnotationAssertion(rdfs:label "proximal segment of rib") SubClassOf( ) SubClassOf(Annotation( "MA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lumen of urethra) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An organ cavity that is part of a urethra.") AnnotationAssertion( ) AnnotationAssertion( "FMA:19709") AnnotationAssertion(Annotation( "FMA:19709") "urethral lumen") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010390") AnnotationAssertion(rdfs:label "lumen of urethra") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (parametrium) AnnotationAssertion(Annotation( "ncithesaurus:Parametrium") "The subserous connective tissue of the pelvic floor of the supracervical portion of the uterus. The parametrium extends laterally between the layers of the broad ligament.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0005627") AnnotationAssertion( "FMA:77061") AnnotationAssertion( "NCIT:C12320") AnnotationAssertion(Annotation( "ncithesaurus:Parametrium") "UMLS:C0227822") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010391") AnnotationAssertion(rdfs:comment "subserous coat of the uterus laterally between the layers of the broad ligament[MP] - todo - check relationships") AnnotationAssertion(rdfs:label "parametrium") SubClassOf( ) # Class: (B cell domain) AnnotationAssertion( "TODO - check") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010392") AnnotationAssertion(rdfs:label "B cell domain") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (T cell domain) AnnotationAssertion( "TODO - check") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010393") AnnotationAssertion(rdfs:label "T cell domain") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lymphocyte domain) AnnotationAssertion( "TODO - check") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010394") AnnotationAssertion(rdfs:label "lymphocyte domain") AnnotationAssertion(rdfs:seeAlso "https://github.com/obophenotype/uberon/issues/513"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lymph node primary follicle) AnnotationAssertion(Annotation( ) Annotation( "MP:0002345") "An unstimulated network of follicular dendritic cells and small resting B cells in the lymph node cortex.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:35530") AnnotationAssertion( "FMA:312350") AnnotationAssertion( "MA:0000743") AnnotationAssertion( "primary follicle of lymph node") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010395") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "lymph node primary follicle") SubClassOf( ) SubClassOf( ) # Class: (afferent lymphatic vessel) AnnotationAssertion(Annotation( "MP:MP"^^xsd:string) "Lymphatic vessel that enters the lymph node. The afferent lymph vessels enter at all parts of the periphery of the lymph node, and after branching and forming a dense plexus in the substance of the capsule, open into the lymph sinuses of the cortical part. In doing this they lose all their coats except their endothelial lining, which is continuous with a layer of similar cells lining the lymph paths.") AnnotationAssertion( ) AnnotationAssertion( "MA:0000748") AnnotationAssertion(Annotation( ) "vasa afferentia lymphoglandula") AnnotationAssertion(Annotation( ) "vasa afferentia lymphoglandulae") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010396") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "afferent lymphatic vessel") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (efferent lymphatic vessel) AnnotationAssertion(Annotation( "MP:MP"^^xsd:string) "Lymphatic vessel that exits the lymph node. The efferent lymphatic vessel commences from the lymph sinuses of the medullary portion of the lymph nodes and leave the lymph nodes either to veins or greater nodes. Efferent lymphatic vessels are also found in the thymus and spleen. This is in contrast to afferent lymphatic vessels, which are found only in lymph nodes.") AnnotationAssertion( ) AnnotationAssertion( "MA:0000749") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "efferent lymphatic vessel") AnnotationAssertion(Annotation( ) "efferent lymphatic vessels") AnnotationAssertion( "UBERON:0010397") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "efferent lymphatic vessel") SubClassOf( ) # Class: (spleen trabecular artery) AnnotationAssertion(Annotation( ) Annotation( "MP:0002354") "One of the branches of the splenic artery[MP].") AnnotationAssertion(Annotation( "Wikipedia") Annotation( ) "When the splenic artery passes into the trabecula of the spleen and branches, they become known as the trabecular arteries. When these arteries then reach the white pulp, and become covered with Periarteriolar lymphoid sheaths, the name changes again to central arteries (or central arterioles). Branches of the central arteries are given to the red pulp, and these are called penicillar arteries).[Wikipedia]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "MA:0000759") AnnotationAssertion( "NCIT:C49775") AnnotationAssertion(Annotation( "ncithesaurus:Splenic_Trabecular_Artery") "UMLS:C1710159") AnnotationAssertion( "uberon") AnnotationAssertion( "trabecular artery") AnnotationAssertion( "UBERON:0010399") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "spleen trabecular artery") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "MP"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (spleen trabecular vein) AnnotationAssertion(Annotation( ) Annotation( "MP:0002228") "One of the veins that feed the splenic vein.") AnnotationAssertion(Annotation( "Wikipedia") Annotation( ) "The trabecular veins are the largest veins inside the spleen. It drains the blood collected in the sinuses of the pulp.[Wikipedia]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "MA:0000760") AnnotationAssertion( "NCIT:C49779") AnnotationAssertion(Annotation( "ncithesaurus:Splenic_Trabecular_Vein") "UMLS:C1710160") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "trabecular vein") AnnotationAssertion( "UBERON:0010400") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "spleen trabecular vein") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (spleen central arteriole) AnnotationAssertion(Annotation( "MP:MP"^^xsd:string) "A blood vessel surrounded by the periarteriolar lymphoid sheath that connects the trabecular artery to the trabecular vein.") AnnotationAssertion( "central arteriole") AnnotationAssertion( "splenic arteriole") AnnotationAssertion( "MA:0000763") AnnotationAssertion(Annotation( "MP:0002361") "follicular arteriole") AnnotationAssertion(Annotation( "MP:0002361") "splenic central arteriole") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010401") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "spleen central arteriole") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (epidermis suprabasal layer) AnnotationAssertion(Annotation( ) Annotation( ) Annotation( "MP:0001233") "Any layer of the epidermis that is superior to the stratum basale.") AnnotationAssertion(Annotation( "MP:0001233") "suprabasal layer") AnnotationAssertion( "EMAPA:35315") AnnotationAssertion( "MA:0000808") AnnotationAssertion( "suprabasal cell layer of skin") AnnotationAssertion( "suprabasal layer of epidermis") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010402") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "epidermis suprabasal layer") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (brain marginal zone) AnnotationAssertion(Annotation( ) "The part of the future brain that is derived from the mantle layer of the neural tube.") AnnotationAssertion(Annotation( "MA"^^xsd:string) "not clear if the MA/EMAPA classes refer specifically to the cortical subset. DHBA class incldues non-neocortex derivatives so it belongs here") AnnotationAssertion(Annotation( "MA:0000812") "brain marginal zone") AnnotationAssertion( "DHBA:10508") AnnotationAssertion( "EMAPA:32680") AnnotationAssertion( "MA:0000812") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010403") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "brain marginal zone") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lateral ventricle subependymal layer) AnnotationAssertion(Annotation( ) "A cell layer below the ependyma in the lateral ventricles of the brain. This region contains adult neural stem cells which have the potential to generate new neurons and glial cells via neurogenesis. It is an adult version of the embryonic forebrain germinal zone.") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:35489") AnnotationAssertion( "MA:0000965") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010404") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "lateral ventricle subependymal layer") SubClassOf(Annotation( "cjm"^^xsd:string) ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "MA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "Wikipedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (spinal cord lateral motor column) AnnotationAssertion(Annotation( "MP:MP"^^xsd:string) "Column of motor neurons which innervate muscles in the limb; motor neurons in the lateral motor column are further organized into pools, each of which innervates a specific muscle in the limb.") AnnotationAssertion( "MA:0001129") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010405") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "spinal cord lateral motor column") SubClassOf( ) SubClassOf( ) # Class: (cholinergic enteric nerve) AnnotationAssertion(Annotation( "MP:0001049") "Nerve fibers that utilize acetylcholine as a neurotransmitter to the intestinal system.") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37480") AnnotationAssertion( "MA:0001146") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010406") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "cholinergic enteric nerve") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) # Class: (ocular angle artery) AnnotationAssertion(Annotation( "MP:MP"^^xsd:string) "The angular artery is the terminal part of the facial artery; it ascends to the medial angle of the eye's orbit, imbedded in the fibers of the angular head of the Quadratus labii superioris, and accompanied by the angular vein.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37673") AnnotationAssertion( "FMA:49583") AnnotationAssertion( "MA:0002010") AnnotationAssertion( "NCIT:C32076") AnnotationAssertion(Annotation( "ncithesaurus:Angular_Artery") "UMLS:C0226116") AnnotationAssertion(Annotation( "FMA:49583") "angular artery") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010408") AnnotationAssertion(rdfs:label "ocular angle artery") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (ocular surface region) AnnotationAssertion(Annotation( "MP:0013754") "The integrated unit (of the eye) that consists of the conjunctiva, the corneal surface, and the ocular mucosal adnexa including the lid margins and the meibomian gland openings, the lacrimal glands and the lacrimal drainage system, all which are critical to maintain ocular surface integrity and provide protection from external antigens and pathogenic microorganisms.") AnnotationAssertion( "EMAPA:35336") AnnotationAssertion( "MA:0002486") AnnotationAssertion(Annotation( "MA:0002486") "eye surface") AnnotationAssertion( "eye surface region") AnnotationAssertion( "ocular surface") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010409") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "ocular surface region") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (inguinal fat pad) AnnotationAssertion(Annotation( "MGI:csmith"^^xsd:string) "Encapsulated adipose tissue found in the groin.") AnnotationAssertion( "MA:0002548") AnnotationAssertion( "fat depot of inguinal region") AnnotationAssertion( "inguinal fat depot") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010410") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "inguinal fat pad") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (retroperitoneal fat pad) AnnotationAssertion(Annotation( "MGI:csmith"^^xsd:string) Annotation( "MP:0005337") "Encapsulated adipose tissue found on the dorsal side of the peritoneum.") AnnotationAssertion( "MA:0002549") AnnotationAssertion( "retroperitoneal fat depot") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010411") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "retroperitoneal fat pad") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (epididymal fat pad) AnnotationAssertion(Annotation( "MGI:csmith"^^xsd:string) Annotation( "MGI:rbabiuk") "Encapsulated adipose tissue associated with the epididymis.") AnnotationAssertion( "EMAPA:35316") AnnotationAssertion( "MA:0002550") AnnotationAssertion(Annotation( "MP:0009288") "periepididymal fat pad") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010412") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "epididymal fat pad") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (parametrial fat pad) AnnotationAssertion(Annotation( "MGI:csmith"^^xsd:string) "Encapsulated adipose tissue associated with the extension of the subserous coat of the uterus laterally between the layers of the broad ligament.") AnnotationAssertion( "BTO:0005628") AnnotationAssertion( "MA:0002953") AnnotationAssertion(Annotation( "MP:0009301") "parametrial fat depot") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0005628") "parametrial adipose tissue") AnnotationAssertion(Annotation( "BTO:0005628") "parametrial fat") AnnotationAssertion( "UBERON:0010413") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "parametrial fat pad") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (omental fat pad) AnnotationAssertion(Annotation( "MP:MP"^^xsd:string) "Encapsulated adipose tissue associated with the fold of peritoneal tissue that extends from the stomach to the posterior abdominal wall after associating with the transverse colon.") AnnotationAssertion( "MA:0002956") AnnotationAssertion(Annotation( "MP:0010044") "omental fat depot") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010414") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "omental fat pad") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lymph node B cell domain) AnnotationAssertion(Annotation( "MP:MP"^^xsd:string) "A part of the lymph node cortex in which B lymphocytes home to primary follicles to survey follicular dendritic cells (FDCs); antigen stimulated B cells proliferate and differentiate within the follicles forming distinctive germinal centers.") AnnotationAssertion( "MA:0002851") AnnotationAssertion(Annotation( "MP:0002344") "lymph node B cell dependent cortex") AnnotationAssertion(Annotation( "MP:0002344") "lymph node B-cell domain") AnnotationAssertion(Annotation( "MP:0002344") "nodular lymph node cortex") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010416") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "lymph node B cell domain") SubClassOf( ) SubClassOf(Annotation( "MP"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (lymph node T cell domain) AnnotationAssertion(Annotation( "MP:0002347") "The paracortex and interfollicular cortex of the lymph node in which T lymphocytes home to survey dendritic cells.") AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37663") AnnotationAssertion( "MA:0002852") AnnotationAssertion( "T cell zone of lymph node") AnnotationAssertion( "T zone of lymph node") AnnotationAssertion(Annotation( "MP:0002347") "lymph node T cell dependent paracortex") AnnotationAssertion( "lymph node T zone") AnnotationAssertion(Annotation( "MP:0002347") "lymph node T-cell domain") AnnotationAssertion(Annotation( "MP:0002347") "lymph node deep cortex") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010417") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "lymph node T cell domain") SubClassOf( ) SubClassOf(Annotation( "MP"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (urethral opening) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An orifice that is part of a lower urinary tract.") AnnotationAssertion( "EMAPA:35965") AnnotationAssertion( "MA:0002867") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "urethral orifice") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010418") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "urethral opening") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lymph node germinal center mantle zone) AnnotationAssertion(Annotation( ) Annotation( ) Annotation( ) Annotation( ) Annotation( "MP:MP"^^xsd:string) "A part of the secondary follicle in which naive B cells reside along with some helper T cells, macrophages and follicular dendritic cells; these are displaced by the expanding germinal centre and form a 'mantle' around it.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "germinal center mantle zone") AnnotationAssertion( "mantle zone of germinal center") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37661") AnnotationAssertion( "MA:0002990") AnnotationAssertion(Annotation( "CL:tm") "lymph node B cell corona") AnnotationAssertion( "lymph node follicular corona") AnnotationAssertion(Annotation( "MA:0002990") "lymph node follicular mantle") AnnotationAssertion(Annotation( "CL:tm") "lymph node inactive zone") AnnotationAssertion(Annotation( "CL:tm") "lymph node peripheral zone") AnnotationAssertion( "mantle zone of lymph node germinal center") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "CL:tm") "lymph node dark zone") AnnotationAssertion( "UBERON:0010420") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "lymph node germinal center mantle zone") SubClassOf( ) SubClassOf(Annotation( "MA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (spleen B cell corona) AnnotationAssertion(Annotation( ) Annotation( ) Annotation( "CL:tm") "The area of the (spleen) secondary B follicle that surrounds the germinal center and harbors the small recirculating B lymphocytes.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MP:0002360") "B cell domain of the spleen") AnnotationAssertion( "B lymphocyte domain of the spleen") AnnotationAssertion(Annotation( "CL:tm") Annotation( "MP:0002360") "lymphocytic corona") AnnotationAssertion(Annotation( "CL:tm") "splenic corona") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37962") AnnotationAssertion(Annotation( "MP:0002360") "follicle mantle") AnnotationAssertion(Annotation( "MP:0002360") "spleen B cell corona") AnnotationAssertion(Annotation( "MP:0002360") "spleen B-cell corona") AnnotationAssertion(Annotation( "CL:tm") Annotation( "MP:0002360") "spleen lymphocytic corona") AnnotationAssertion(Annotation( "MP:0002360") "splenic B cell corona") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "CL:tm") Annotation( "MP:0002360") "spleen mantle zone") AnnotationAssertion( "UBERON:0010421") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "spleen B cell corona") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "CL:tm") ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (primary nodular lymphoid tissue) AnnotationAssertion(Annotation( "CL:tm") "A lymphoid follicle containing naive B cells.") AnnotationAssertion( "The cortex of lymph nodes, the white pulp of spleen, and mucosa associated lymphoid tissue all have these primary follicles") AnnotationAssertion( "FMA:55223") AnnotationAssertion( "primary lymphoid follicle") AnnotationAssertion(Annotation( "FMA:55223") "primary lymphoid nodule") AnnotationAssertion( "uberon") AnnotationAssertion( "primary follicle") AnnotationAssertion( "UBERON:0010422") AnnotationAssertion(rdfs:label "primary nodular lymphoid tissue") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf(Annotation( "CL:tm") ObjectSomeValuesFrom( )) # Class: (primary lymphoid nodule of tonsil) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A primary nodular lymphoid tissue that is part of a tonsil.") AnnotationAssertion( "FMA:86018") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:86018") "lymphoid nodule of tonsil") AnnotationAssertion( "UBERON:0010423") AnnotationAssertion(rdfs:label "primary lymphoid nodule of tonsil") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (distal segment of rib) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37492") AnnotationAssertion( "MA:0001397") AnnotationAssertion( "MA:0001418") AnnotationAssertion(Annotation( ) "distal part of rib") AnnotationAssertion(Annotation( "MA:0001397") "distal rib") AnnotationAssertion( "distal rib segment") AnnotationAssertion( "sternal rib") AnnotationAssertion( "vertical segment of rib") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010424") AnnotationAssertion(rdfs:comment "The distal rib derives from both somite halves[PMID:15906248]") AnnotationAssertion(rdfs:label "distal segment of rib") SubClassOf( ) SubClassOf(Annotation( "MA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (internal naris) AnnotationAssertion(Annotation( ) "A naris that is located inside the nasal cavity and connects to the pharynx.") AnnotationAssertion( "choanal") AnnotationAssertion( "In humans the only internal naris is the posterior nasal aperture, which connects to the nasopharynx") AnnotationAssertion( ) AnnotationAssertion( "NCIT:C32856") AnnotationAssertion( "choana") AnnotationAssertion( "internal choana") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "choanae") AnnotationAssertion(Annotation( ) "internal nares") AnnotationAssertion( "internal nostril") AnnotationAssertion( "UBERON:0010425") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "internal naris") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (ciliary processes) AnnotationAssertion(Annotation( ) "The ciliary processes are formed by the inward folding of the various layers of the choroid, i.e. , the choroid proper and the lamina basalis, and are received between corresponding foldings of the suspensory ligament of the lens.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:76551") AnnotationAssertion(Annotation( "FMA:76551") "ciliary processes") AnnotationAssertion(Annotation( "FMA:76551") "ciliary processes set") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) Annotation( ) "processus ciliares") AnnotationAssertion(Annotation( "FMA:76551") "set of ciliary processes") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "ciliary process") AnnotationAssertion(Annotation( ) Annotation( ) "processus ciliares") AnnotationAssertion( "UBERON:0010427") AnnotationAssertion(rdfs:label "ciliary processes") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/b/b2/Gray875.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (flat bone) AnnotationAssertion(Annotation( ) "A bone that is shaped as a broad flat plate and composed of two thin layers of compact tissue enclosing between them a variable quantity of cancellous tissue, which is the location of red bone marrow.") AnnotationAssertion( "In an adult mammal, most red blood cells are formed in flat bones") AnnotationAssertion( "Flat bones are those bones which are found where the principal requirement is either extensive protection or the provision of broad surfaces for muscular attachment") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:7476") AnnotationAssertion( "NCIT:C32616") AnnotationAssertion(Annotation( "ncithesaurus:Flat_Bone") "UMLS:C0222649") AnnotationAssertion( "galen:FlatBone") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "os planum") AnnotationAssertion( "UBERON:0010428") AnnotationAssertion(rdfs:comment "Examples: cranium, the ilium, sternum, rib cage, the sacrum and the scapula; the occipital, parietal, frontal, nasal, lacrimal, vomer, scapula, os coxC&, sternum, and ribs") AnnotationAssertion(rdfs:label "flat bone") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (zygomaticus muscle) AnnotationAssertion(Annotation( ) "One of: zygomaticus major, zygomaticus minor.") AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37703") AnnotationAssertion( "MA:0002404") AnnotationAssertion( "NCIT:C53182") AnnotationAssertion(Annotation( "ncithesaurus:Zygomaticus") "UMLS:C1710708") AnnotationAssertion( "m. zygomaticus") AnnotationAssertion(Annotation( "MA:0002404") "zygomaticus") AnnotationAssertion( "uberon") AnnotationAssertion( "m. levator nasii") AnnotationAssertion( "UBERON:0010437") AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "origin: posterior braincase") AnnotationAssertion(rdfs:label "zygomaticus muscle") SubClassOf(Annotation( "MFMO-abduced") ) SubClassOf(Annotation( "Wikipedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (teres muscle) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:36155") AnnotationAssertion( "NCIT:C33752") AnnotationAssertion(Annotation( "ncithesaurus:Teres_Muscle") "UMLS:C1515272") AnnotationAssertion( "teres") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010467") AnnotationAssertion(rdfs:label "teres muscle") SubClassOf( ) # Class: (teres minor muscle) AnnotationAssertion(Annotation( ) "A narrow, elongated muscle of the rotator cuff.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:36156") AnnotationAssertion( "FMA:32550") AnnotationAssertion( "NCIT:C33751") AnnotationAssertion(Annotation( "ncithesaurus:Teres_Minor_Muscle") "UMLS:C0224231") AnnotationAssertion(Annotation( "FMA:32550") "teres minor") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "musculus teres minor") AnnotationAssertion( "UBERON:0010496") AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "Dorsal group[Kardong]") AnnotationAssertion(rdfs:label "teres minor muscle") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/c/c4/Gray810.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "Wikipedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "lateral border of the scapula") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "inferior facet of greater tubercle of the humerus") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (pseudostratified columnar epithelium) AnnotationAssertion(Annotation( ) Annotation( ) "A simple columnar epithelium that looks stratified but is not, because its cells are arranged with their nuclei at different levels.") AnnotationAssertion( "Pseudostratified epithelia function in secretion or absorption. If a specimen looks stratified but has cilia, then it is a pseudostratified ciliated epithelium, since stratified epithelia do not have cilia.") AnnotationAssertion(Annotation( "NCIT") "glandular in NCIT; we consider the two NCIT terms synonymous") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:45572") AnnotationAssertion( "NCIT:C33419") AnnotationAssertion( "NCIT:C49316") AnnotationAssertion(Annotation( "ncithesaurus:Pseudostratified_Columnar_Epithelium") "UMLS:C0836138") AnnotationAssertion(Annotation( "ncithesaurus:Pseudostratified_Epithelium") "UMLS:C1514590") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010498") AnnotationAssertion(rdfs:label "pseudostratified columnar epithelium") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (pseudostratified ciliated columnar epithelium) AnnotationAssertion(Annotation( "NCIT:NCIT") "Epithelium composed of a single layer of cells, appearing as layered because the column-shaped cells vary in height so the nuclei are at different levels. The basal portions of all the cells are in contact with the basement membrane. It lines the respiratory system and the male reproductive tract. The cilia in the respiratory tract are motile, while the stereocilia in the male reproductive tract are immobile.") AnnotationAssertion( ) AnnotationAssertion( "FMA:13146") AnnotationAssertion( "NCIT:C13181") AnnotationAssertion(Annotation( "ncithesaurus:Pseudostratified_Columnar_Ciliated_Epithelium") "UMLS:C0506992") AnnotationAssertion(Annotation( "FMA:13146") "epithelium pseudostratificatum columnare ciliatum (trachea et bronchi)") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010499") AnnotationAssertion(rdfs:label "pseudostratified ciliated columnar epithelium") SubClassOf( ) SubClassOf( ) DisjointClasses( ) # Class: (pseudostratified smooth columnar epithelium) AnnotationAssertion( "FMA:72059") AnnotationAssertion( "uberon") AnnotationAssertion( "non-ciliated pseudostratified columnar epithelia") AnnotationAssertion( "UBERON:0010501") AnnotationAssertion(rdfs:label "pseudostratified smooth columnar epithelium") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (obsolete round ligament) AnnotationAssertion( "NCIT:C12319") AnnotationAssertion( "UBERON:0006588") AnnotationAssertion( "UBERON:0006589") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010504") AnnotationAssertion(rdfs:label "obsolete round ligament") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (periosteal dura mater) AnnotationAssertion(Annotation( ) "The outermost of the two layers of the cranial dura mater which normally always adheres to the periosteum of the bones of the cranial vault.") AnnotationAssertion( ) AnnotationAssertion( "FMA:231547") AnnotationAssertion( "NCIT:C33306") AnnotationAssertion(Annotation( "ncithesaurus:Periosteal_Layer_of_the_Dura_Mater") "UMLS:C1518991") AnnotationAssertion(Annotation( "FMA:231547") "outer layer of dura mater") AnnotationAssertion( "outer periosteal layer of dura mater") AnnotationAssertion(Annotation( "FMA:231547") "periosteal dura") AnnotationAssertion(Annotation( "FMA:231547") "periosteal layer of dura mater") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:231547") "endosteal layer of dura mater") AnnotationAssertion( "UBERON:0010505") AnnotationAssertion(rdfs:label "periosteal dura mater") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (meningeal dura mater) AnnotationAssertion(Annotation( "ncithesaurus:Meningeal_Layer_of_the_Dura_Mater") "The inner layer of the dura mater surrounding the brain. It is mostly fused with the outer layer, the endocranium that is adherent to the inner aspect of the cranial bones. These two layers form the dura mater. The latter covers and protects the brain and the spinal cord.") AnnotationAssertion( "not clear whether this should be classified as part of cranial dura mater, as the division only makes sense in this area") AnnotationAssertion( ) AnnotationAssertion( "FMA:231549") AnnotationAssertion( "NCIT:C33093") AnnotationAssertion(Annotation( "ncithesaurus:Meningeal_Layer_of_the_Dura_Mater") "UMLS:C1513121") AnnotationAssertion(Annotation( "FMA:231549") "inner layer of dura mater") AnnotationAssertion(Annotation( "FMA:231549") "meningeal dura") AnnotationAssertion(Annotation( "FMA:231549") "meningeal layer of dura mater") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010506") AnnotationAssertion(rdfs:label "meningeal dura mater") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (layer of dura mater) AnnotationAssertion(Annotation( ) "The intracranial dura mater, consisting of two layers: the outer periosteal layer which normally always adheres to the periosteum of the bones of the cranial vault; and the inner meningeal layer which in most places is fused with the outer. The two layers separate to accommodate meningeal vessels and large venous (dural) sinuses. The meningeal layer is also involved in the formation of the various dural folds, such as the falx cerebri and tentorium cerebelli and is comparable to and continuous with the dural mater of the spinal cord. The cranial epidural space is then a potential space between the bone and the combined periosteum/periosteal layer of the dura mater realised only pathologically and is neither continuous with or comparable to the vertebral epidural space.") AnnotationAssertion( "not clear whether this should be classified as part of cranial dura mater, as the division only makes sense in this area") AnnotationAssertion( "FMA:231545") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010507") AnnotationAssertion(rdfs:label "layer of dura mater") SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (strand of pelage hair) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A strand of hair that is part of a coat of hair.") AnnotationAssertion( "EMAPA:36485") AnnotationAssertion( "MA:0001897") AnnotationAssertion(Annotation( "MA:0001897") "pelage hair") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010509") AnnotationAssertion(rdfs:label "strand of pelage hair") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (strand of auchene hair) AnnotationAssertion(Annotation( "MP:0000405") "A truncal hair that has a single constriction and bend about midway along the hair shaft, and contains two or more air cells in the medulla.") AnnotationAssertion( "EMAPA:36527") AnnotationAssertion( "MA:0001893") AnnotationAssertion(Annotation( "MA:0001893") "auchene hair") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010510") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "strand of auchene hair") SubClassOf(Annotation( "MA"^^xsd:string) ) # Class: (strand of awl hair) AnnotationAssertion(Annotation( ) Annotation( "MP:0000400") "A truncal hairs that is straight, but shorter than a guard hair, and contain two or more air cells in the medulla.") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:36639") AnnotationAssertion( "MA:0001894") AnnotationAssertion(Annotation( "MA:0001894") "awl hair") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010511") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "strand of awl hair") SubClassOf(Annotation( "MA"^^xsd:string) ) # Class: (strand of guard hair) AnnotationAssertion(Annotation( ) Annotation( "MP:0006365") "A long, straight truncal hair that contains two air cells in the medulla[MP]. A strand of hair from the top layer consisting of longer, often coarser, straight shafts of hair that stick out through the underfur. This is usually the visible layer for most mammals and contains most of the pigmentation.") AnnotationAssertion( "It protects the underfur from outside factors, such as rain, and is thus often water-repellent") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:36528") AnnotationAssertion( "MA:0001896") AnnotationAssertion(Annotation( "MA:0001896") "guard hair") AnnotationAssertion( "guardhair") AnnotationAssertion(Annotation( ) "monotrich hair") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010512") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "strand of guard hair") SubClassOf(Annotation( "MA"^^xsd:string) ) # Class: (strand of zigzag hair) AnnotationAssertion(Annotation( "MP:0006366") "A truncal hair that has two or more sharp bends with diameter constrictions at the bends, and contain one air cell in the medulla.") AnnotationAssertion( "EMAPA:36640") AnnotationAssertion( "MA:0001898") AnnotationAssertion(Annotation( "MA:0001898") "zigzag hair") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010513") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "strand of zigzag hair") SubClassOf(Annotation( "MA"^^xsd:string) ) SubClassOf( ) # Class: (strand of duvet hair) AnnotationAssertion(Annotation( "MP:0000408") "A strand of hair from the fine underhair of the coat.") AnnotationAssertion(Annotation( "MA"^^xsd:string) "not a pelage hair in MA, but is in MP") AnnotationAssertion( "MA:0001895") AnnotationAssertion(Annotation( "MA:0001895") "duvet hair") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010514") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "strand of duvet hair") SubClassOf(Annotation( "MA"^^xsd:string) ) # Class: (electroreceptor organ) AnnotationAssertion(Annotation( ) "An organ that is capable of detecting electrical stimulus.") AnnotationAssertion( "electric sense organ") AnnotationAssertion( "electroreception organ") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010521") AnnotationAssertion(rdfs:label "electroreceptor organ") SubClassOf( ) # Class: (replacement element) AnnotationAssertion(Annotation( ) Annotation( "GO_REF:0000034"^^xsd:string) Annotation( "PSPUB:0000170"^^xsd:string) Annotation( "VSAO:0000135") "Skeletal element that forms as a replacement or substitution of another element or tissue.") AnnotationAssertion( "VSAO:0000135") AnnotationAssertion( "XAO:0004016") AnnotationAssertion( "ZFA:0005624") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010522") AnnotationAssertion(rdfs:label "replacement element") SubClassOf(Annotation( "VSAO"^^xsd:string) ) SubClassOf(Annotation( "cjm"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (microcirculatory vessel) AnnotationAssertion(Annotation( ) Annotation( "MESH:A07.231.432") Annotation( "ZFA:0005251") "A vessel of the microcirculature, lying between the arterioles and venules; includes capillaries (blood and lymphatic), metarterioles and arteriovenous anastomoses.") AnnotationAssertion( "MESH:A07.231.432") AnnotationAssertion( "TAO:0005251") AnnotationAssertion( "ZFA:0005251") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "TAO:0005251") Annotation( ) "microcirculatory vessels") AnnotationAssertion( "UBERON:0010523") AnnotationAssertion(rdfs:label "microcirculatory vessel") SubClassOf( ) SubClassOf(Annotation( "ZFA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (fibularis tertius) AnnotationAssertion(Annotation( ) Annotation( ) "A muscle located in the lower limb that arises from the lower third of the anterior surface of the fibula; from the lower part of the interosseous membrane; and from an intermuscular septum between it and the peroneus brevis and inserted into the dorsal surface of the base of the metatarsal bone of the 5th digit. It is innervated by the deep fibular nerve. Its action is that of weak dorsiflexion of the ankle joint and to evert the foot at the ankle joint.") AnnotationAssertion( "The fibularis tertius, commonly associated with human bipedalism (e.g., Lewis, 1989, see above), was present in almost half (3/7) of the dissected bonobos (in the fetus, infant Etje, and adolescent Jasiri), going to metatarsal V-exactly as it normally does in humans-in the fetus and infant, and to the proximal phalanx of digit 5 in the adolescent [DOI:10.3389/fevo.2018.00053]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:36261") AnnotationAssertion( "FMA:22538") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) Annotation( ) "musculus peroneus tertius") AnnotationAssertion(Annotation( "EMAPA:36261") "peroneus digiti quinti") AnnotationAssertion(Annotation( ) "peroneus tertius") AnnotationAssertion(Annotation( "FMA:22538") "peroneus tertius") AnnotationAssertion(Annotation( ) "peroneus tertius muscle") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "fibularis tertius") AnnotationAssertion(Annotation( ) "fibularis tertius muscle") AnnotationAssertion(Annotation( ) "peronaeus tertius") AnnotationAssertion(Annotation( "EMAPA:36261") "peroneus digit V") AnnotationAssertion(Annotation( "EMAPA:36261") "peroneus digiti minimi") AnnotationAssertion( "UBERON:0010524") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "fibularis tertius") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (fibularis brevis) AnnotationAssertion(Annotation( ) "The peroneus brevis muscle (or fibularis brevis) lies under cover of the peroneus longus, and is a shorter and smaller muscle.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:36252") AnnotationAssertion( "FMA:22540") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) Annotation( ) "musculus peroneus brevis") AnnotationAssertion(Annotation( ) "peronaeus brevis") AnnotationAssertion(Annotation( "FMA:22540") "peroneus brevis") AnnotationAssertion(Annotation( ) "peroneus brevis muscle") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "fibularis brevis") AnnotationAssertion(Annotation( ) "peronius brevis") AnnotationAssertion( "UBERON:0010526") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "fibularis brevis") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/3/3d/Gray357.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (cavity of bone organ) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An organ cavity that surrounded_by a bone.") AnnotationAssertion( "FMA:24021") AnnotationAssertion(Annotation( "FMA:24021") "bone organ cavity") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010527") AnnotationAssertion(rdfs:label "cavity of bone organ") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pneumatic cavity of bone) AnnotationAssertion( "FMA:24028") AnnotationAssertion(Annotation( "FMA:24028") "air space of bone") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010528") AnnotationAssertion(rdfs:label "pneumatic cavity of bone") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (metanephros induced blastemal cells) AnnotationAssertion(Annotation( "EMAPA"^^xsd:string) "different versions of EMAPA have different labels for the same classes. In vHOG this is part of metanephros cortex but this leads to a cycle in basic.") AnnotationAssertion( "EHDAA2:0001143") AnnotationAssertion( "EHDAA:7007") AnnotationAssertion( "EHDAA:8105") AnnotationAssertion( "EMAPA:17953") AnnotationAssertion( "EMAPA:27621") AnnotationAssertion( "MA:0002998") AnnotationAssertion( "VHOG:0001241") AnnotationAssertion(Annotation( "VHOG:0001241") "induced blastemal cells") AnnotationAssertion(Annotation( "EMAPA:17953") "nephrogenic interstitium of nephrogenic zone") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "EMAPA:17645") "cap mesenchyme of metanephros of urinary system") AnnotationAssertion( "nephrogenic interstitium") AnnotationAssertion(Annotation( "EMAPA:17953") "peripheral blastema") AnnotationAssertion( "UBERON:0010531") AnnotationAssertion(rdfs:label "metanephros induced blastemal cells") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (primitive nephron) AnnotationAssertion(Annotation( ) "An epithelial tube that is fated to become a nephron.") AnnotationAssertion(Annotation( "EHDAA2"^^xsd:string) "EHDAA2 treats this as already having a tubular structure, but in the ZFA representation this is a cluster of cells") AnnotationAssertion( "developing nephron") AnnotationAssertion( "primitive nephron") AnnotationAssertion( "future nephron") AnnotationAssertion( "presumptive nephron") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010532") AnnotationAssertion(rdfs:label "primitive nephron") SubClassOf(Annotation( "EHDAA2-inferred") ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (metanephros cortex) AnnotationAssertion(Annotation( "GO:0072214") "The metanephric cortex is the outer region of the metanephros[GO].") AnnotationAssertion( "VHOG:0000714") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010533") AnnotationAssertion(rdfs:label "metanephros cortex") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "VHOG"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (primitive mesonephric nephron) AnnotationAssertion(Annotation( ) Annotation( "GOC:cvs") Annotation( "ZFA:0005584") "Anatomical cluster which give rise to mature mesonephric nephrons. Zebrafish continously generate new mesonephric nephrons.") AnnotationAssertion( "ZFA:0005584") AnnotationAssertion(Annotation( "ZFA:0005584") "developing mesonephric nephron") AnnotationAssertion( "primitive mesonephric nephron") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010534") AnnotationAssertion(rdfs:label "primitive mesonephric nephron") SubClassOf( ) SubClassOf( ) # Class: (primitive metanephric nephron) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A primitive nephron that is part of a metanephros.") AnnotationAssertion(Annotation( "EHDAA2:0001516") "primitive nephron") AnnotationAssertion( "EHDAA2:0001516") AnnotationAssertion( "developing metanephric nephron") AnnotationAssertion( "primitive metanephric nephron") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010535") AnnotationAssertion(rdfs:label "primitive metanephric nephron") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (nephron progenitor) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010536") AnnotationAssertion(rdfs:label "nephron progenitor") SubClassOf(Annotation( "ZFA"^^xsd:string) ) SubClassOf(Annotation( "cjm"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (mesonephric nephron progenitor) AnnotationAssertion(Annotation( "ZFA:0005587") "Cluster of cells comprising a portion of tissue which gives rise to new mesonephric nephrons. The cluster contains self-renewing stem cells.") AnnotationAssertion( "ZFA:0005587") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010537") AnnotationAssertion(rdfs:label "mesonephric nephron progenitor") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (paired limb/fin segment) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An appendage segment that is part of a limb/fin.") AnnotationAssertion( "limb/fin segment") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010538") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "paired limb/fin segment") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses( ) # Class: (tarsus pre-cartilage condensation) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A pre-cartilage condensation that has the potential to develop into a tarsal bone.") AnnotationAssertion( "EHDAA2:0001978") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010540") AnnotationAssertion(rdfs:label "tarsus pre-cartilage condensation") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (tarsus cartilage element) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A cartilaginous condensation that has the potential to develop into a tarsal bone.") AnnotationAssertion( "EHDAA2:0001977") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010541") AnnotationAssertion(rdfs:label "tarsus cartilage element") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (acropodial skeleton) AnnotationAssertion(Annotation( ) Annotation( "VSAO:0005028") Annotation( "VSAO:NI"^^xsd:string) "The subdivision of the skeleton that consists of all the skeletal elements at the distalmost end of the autopodium - i.e. the bones of the digits or their cartilaginous precursors[VSAO,modified].") AnnotationAssertion( "FMA:231315") AnnotationAssertion( "VSAO:0005028") AnnotationAssertion( "acropodial skeleton") AnnotationAssertion( "acropodium skeleton") AnnotationAssertion(Annotation( "FMA:231315") "set of phalanges") AnnotationAssertion( "skeletal parts of acropodial region") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "VSAO:0005028") Annotation( "VSAO:NI"^^xsd:string) "acropodium") AnnotationAssertion( "digital skeleton") AnnotationAssertion( "digits skeleton") AnnotationAssertion( "phalangeal skeleton") AnnotationAssertion( "skeletal parts of acropodium") AnnotationAssertion( "skeleton of digits") AnnotationAssertion( "UBERON:0010543") AnnotationAssertion(rdfs:label "acropodial skeleton") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "PHENOSCAPE:ni"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (metacarpus skeleton) AnnotationAssertion(Annotation( ) "The metacarpus is the intermediate part of the manus skeleton that is located between the phalanges (bones of the fingers) distally and the carpus which forms the connection to the forearm. The metacarpus consists of metacarpal bones. The metacarpals form a transverse arch to which the rigid row of distal carpal bones are fixed. The peripheral metacarpals (those of the thumb and little finger) form the sides of the cup of the palmar gutter and as they are brought together they deepen this concavity. The index metacarpal is the most firmly fixed, while the thumb metacarpal articulates with the trapezium and acts independently from the others. The middle metacarpals are tightly united to the carpus by intrinsic interlocking bone elements at their bases. The ring metacarpal forms a transitional element of the semi-independent last metacarpal. [WP,unvetted].") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0000946") Annotation( "AAO"^^xsd:string) Annotation( "AAO:LAP"^^xsd:string) "Segment of the forearm corresponding to the metacarpus, which articulates with the carpals at one end and with the phalanges at the other end.[AAO]") AnnotationAssertion( ) AnnotationAssertion( "AAO:0000946") AnnotationAssertion( "EMAPA:36158") AnnotationAssertion( "FMA:71336") AnnotationAssertion( "MESH:A02.835.232.087.535") AnnotationAssertion( "VSAO:0005026") AnnotationAssertion( "XAO:0003208") AnnotationAssertion( "anterior metapodial skeleton") AnnotationAssertion(Annotation( "FMA:71336") "metacarpal bones") AnnotationAssertion( "metacarpal skeleton") AnnotationAssertion(Annotation( "FMA:71336") "metacarpals [I-V]") AnnotationAssertion(Annotation( "FMA:71336") "metacarpals set") AnnotationAssertion(Annotation( "FMA:71336") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "ossa metacarpalia [I-V]") AnnotationAssertion(Annotation( "FMA:71336") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "ossa metacarpi [I-V]") AnnotationAssertion(Annotation( "FMA:71336") "set of metacarpal bones") AnnotationAssertion(Annotation( "FMA:71336") "set of metacarpals") AnnotationAssertion(Annotation( "FMA:71336") "set of metacarpals [I-V]") AnnotationAssertion( "skeleton of metacarpus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "VSAO:0005026") Annotation( "VSAO:NI"^^xsd:string) "anterior metapodium") AnnotationAssertion( "fore metapodial skeleton") AnnotationAssertion(Annotation( ) Annotation( "AAO:0000946") Annotation( "MA:th"^^xsd:string) "fore metapodium") AnnotationAssertion(Annotation( ) Annotation( ) "metacarpalia") AnnotationAssertion( "UBERON:0010544") AnnotationAssertion(rdfs:label "metacarpus skeleton") AnnotationAssertion( "Metacarpals:numbered-en.svg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "many to one") ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses(Annotation( "lexical"^^xsd:string) ) # Class: (metatarsus skeleton) AnnotationAssertion(Annotation( ) "Limb segment that consists of the long bones of the pes. The metatarsals are analogous to the metacarpal bones of the manus.") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0000221") Annotation( "AAO"^^xsd:string) Annotation( "AAO:LAP"^^xsd:string) "Segment of the leg corresponding to the metatarsus, which articulates with the carpals at one end and with the phalanges at the other end.[AAO]") AnnotationAssertion( ) AnnotationAssertion( "AAO:0000221") AnnotationAssertion( "FMA:71340") AnnotationAssertion( "MESH:D008684") AnnotationAssertion( "OpenCyc:Mx4rva_rBJwpEbGdrcN5Y29ycA") AnnotationAssertion( "VSAO:0005027") AnnotationAssertion( "XAO:0003212") AnnotationAssertion(Annotation( "FMA:71340") "metatarsal bones set") AnnotationAssertion( "metatarsal skeleton") AnnotationAssertion(Annotation( "FMA:71340") "metatarsals [I-V]") AnnotationAssertion(Annotation( "FMA:71340") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "ossa metatarsalia [I-V]") AnnotationAssertion(Annotation( "FMA:71340") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "ossa metatarsi[I-V]") AnnotationAssertion( "posterior metapodial skeleton") AnnotationAssertion(Annotation( "FMA:71340") "set of metatarsal bones") AnnotationAssertion(Annotation( "FMA:71340") "set of metatarsals [I-V]") AnnotationAssertion( "skeleton of metatarsus") AnnotationAssertion( "uberon") AnnotationAssertion( "metatarsalia") AnnotationAssertion(Annotation( ) Annotation( ) "ossa metatarsalia") AnnotationAssertion(Annotation( "VSAO:0005027") Annotation( "VSAO:NI"^^xsd:string) "posterior metapodium") AnnotationAssertion( "UBERON:0010545") AnnotationAssertion(rdfs:label "metatarsus skeleton") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/5/52/Gray291.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "many to one") ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (metapodial skeleton) AnnotationAssertion(Annotation( ) "Subdivision of skeleton that corresponds to metapodium region, between acropodial skeleton and mesopdoial skeleton.") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "VSAO:0005025") Annotation( "VSAO"^^xsd:string) Annotation( "VSAO:NI") "Endochondral bone complex located between the mesopodium and the acropodium and consisting of the metacarpals or metatarsals.[VSAO]") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "VSAO:0005025") Annotation( "VSAO"^^xsd:string) "relationship type change: subclass skeletal subdivision (VSAO:0000042) CHANGED TO: connected_to subdivision of skeleton (UBERON:0010912)[VSAO]") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "VSAO:0005025") Annotation( "VSAO"^^xsd:string) "relationship type change: subclass skeletal subdivision (VSAO:0000042) CHANGED TO: distally_connected_to subdivision of skeleton (UBERON:0010912)[VSAO]") AnnotationAssertion( "VSAO:0005025") AnnotationAssertion( "metacarpal/metatarsal skeleton") AnnotationAssertion(Annotation( "VSAO:0005025") "metapodial skeleton") AnnotationAssertion(Annotation( ) "metapodium skeleton") AnnotationAssertion(Annotation( ) "skeletal parts of metapodium") AnnotationAssertion( "skeleton of metapodium") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "VSAO:0005025") Annotation( "VSAO:NI"^^xsd:string) "metapodium") AnnotationAssertion( "UBERON:0010546") AnnotationAssertion(rdfs:label "metapodial skeleton") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "PHENOSCAPE:ni"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pedal digit 1 metatarsal pre-cartilage condensation) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A pedal digit metatarsal pre-cartilage condensation that is part of a pedal digit 1 mesenchyme.") AnnotationAssertion( "EHDAA2:0002040") AnnotationAssertion( "EMAPA:17725") AnnotationAssertion(Annotation( "OBOL:accepted"^^xsd:string) "hind limb digit 1 metatarsal pre-cartilage condensation") AnnotationAssertion(Annotation( ) Annotation( ) "pedal digit I metatarsal pre-cartilage condensation") AnnotationAssertion(Annotation( "EHDAA2:0002040") "toe 1 metatarsal pre-cartilage condensation") AnnotationAssertion(Annotation( "NCBITaxon:9606"^^xsd:string) Annotation( "OBOL:accepted"^^xsd:string) Annotation( ) "foot digit 1 metatarsal pre-cartilage condensation") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010547") AnnotationAssertion(rdfs:label "pedal digit 1 metatarsal pre-cartilage condensation") SubClassOf( ) SubClassOf( ) # Class: (pedal digit 2 metatarsal pre-cartilage condensation) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A pedal digit metatarsal pre-cartilage condensation that is part of a pedal digit 2 mesenchyme.") AnnotationAssertion( "EHDAA2:0002045") AnnotationAssertion( "EMAPA:17727") AnnotationAssertion(Annotation( "OBOL:accepted"^^xsd:string) "hind limb digit 2 metatarsal pre-cartilage condensation") AnnotationAssertion(Annotation( ) Annotation( ) "pedal digit II metatarsal pre-cartilage condensation") AnnotationAssertion(Annotation( "EHDAA2:0002045") "toe 2 metatarsal pre-cartilage condensation") AnnotationAssertion(Annotation( "NCBITaxon:9606"^^xsd:string) Annotation( "OBOL:accepted"^^xsd:string) Annotation( ) "foot digit 2 metatarsal pre-cartilage condensation") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010548") AnnotationAssertion(rdfs:label "pedal digit 2 metatarsal pre-cartilage condensation") SubClassOf( ) SubClassOf( ) # Class: (pedal digit 3 metatarsal pre-cartilage condensation) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A pedal digit metatarsal pre-cartilage condensation that is part of a pedal digit 3 mesenchyme.") AnnotationAssertion( "EHDAA2:0002050") AnnotationAssertion( "EMAPA:17729") AnnotationAssertion(Annotation( "OBOL:accepted"^^xsd:string) "hind limb digit 3 metatarsal pre-cartilage condensation") AnnotationAssertion(Annotation( ) Annotation( ) "pedal digit III metatarsal pre-cartilage condensation") AnnotationAssertion(Annotation( "EHDAA2:0002050") "toe 3 metatarsal pre-cartilage condensation") AnnotationAssertion(Annotation( "NCBITaxon:9606"^^xsd:string) Annotation( "OBOL:accepted"^^xsd:string) Annotation( ) "foot digit 3 metatarsal pre-cartilage condensation") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010549") AnnotationAssertion(rdfs:label "pedal digit 3 metatarsal pre-cartilage condensation") SubClassOf( ) SubClassOf( ) # Class: (pedal digit 4 metatarsal pre-cartilage condensation) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A pedal digit metatarsal pre-cartilage condensation that is part of a pedal digit 4 mesenchyme.") AnnotationAssertion( "EHDAA2:0002055") AnnotationAssertion( "EMAPA:17731") AnnotationAssertion(Annotation( "OBOL:accepted"^^xsd:string) "hind limb digit 4 metatarsal pre-cartilage condensation") AnnotationAssertion(Annotation( ) Annotation( ) "pedal digit IV metatarsal pre-cartilage condensation") AnnotationAssertion(Annotation( "EHDAA2:0002055") "toe 4 metatarsal pre-cartilage condensation") AnnotationAssertion(Annotation( "NCBITaxon:9606"^^xsd:string) Annotation( "OBOL:accepted"^^xsd:string) Annotation( ) "foot digit 4 metatarsal pre-cartilage condensation") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010550") AnnotationAssertion(rdfs:label "pedal digit 4 metatarsal pre-cartilage condensation") SubClassOf( ) SubClassOf( ) # Class: (pedal digit 5 metatarsal pre-cartilage condensation) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A pedal digit metatarsal pre-cartilage condensation that is part of a pedal digit 5 mesenchyme.") AnnotationAssertion( "EHDAA2:0002060") AnnotationAssertion( "EMAPA:17733") AnnotationAssertion(Annotation( "OBOL:accepted"^^xsd:string) "hind limb digit 5 metatarsal pre-cartilage condensation") AnnotationAssertion(Annotation( ) Annotation( ) "pedal digit V metatarsal pre-cartilage condensation") AnnotationAssertion(Annotation( "EHDAA2:0002060") "toe 5 metatarsal pre-cartilage condensation") AnnotationAssertion(Annotation( "NCBITaxon:9606"^^xsd:string) Annotation( "OBOL:accepted"^^xsd:string) Annotation( ) "foot digit 5 metatarsal pre-cartilage condensation") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010551") AnnotationAssertion(rdfs:label "pedal digit 5 metatarsal pre-cartilage condensation") SubClassOf( ) SubClassOf( ) # Class: (pedal digit 1 metatarsal cartilage element) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A pedal digit metatarsal cartilage condensation that is part of a pedal digit 1 mesenchyme.") AnnotationAssertion( "EMAPA:18106") AnnotationAssertion(Annotation( "OBOL:accepted"^^xsd:string) "hind limb digit 1 metatarsal cartilage condensation") AnnotationAssertion(Annotation( ) Annotation( ) "pedal digit I metatarsal cartilage element") AnnotationAssertion( "toe 1 metatarsal cartilage condensation") AnnotationAssertion(Annotation( "NCBITaxon:9606"^^xsd:string) Annotation( "OBOL:accepted"^^xsd:string) Annotation( ) "foot digit 1 metatarsal cartilage element") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010557") AnnotationAssertion(rdfs:label "pedal digit 1 metatarsal cartilage element") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pedal digit 2 metatarsal cartilage element) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A pedal digit metatarsal cartilage element that is part of a pedal digit 2 mesenchyme.") AnnotationAssertion( "EMAPA:18111") AnnotationAssertion(Annotation( "OBOL:accepted"^^xsd:string) "hind limb digit 2 metatarsal cartilage condensation") AnnotationAssertion(Annotation( ) Annotation( ) "pedal digit II metatarsal cartilage element") AnnotationAssertion( "toe 2 metatarsal cartilage element") AnnotationAssertion(Annotation( "NCBITaxon:9606"^^xsd:string) Annotation( "OBOL:accepted"^^xsd:string) Annotation( ) "foot digit 2 metatarsal cartilage element") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010558") AnnotationAssertion(rdfs:label "pedal digit 2 metatarsal cartilage element") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pedal digit 3 metatarsal cartilage element) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A pedal digit metatarsal cartilage element that is part of a pedal digit 3 mesenchyme.") AnnotationAssertion( "EMAPA:18116") AnnotationAssertion(Annotation( "OBOL:accepted"^^xsd:string) "hind limb digit 3 metatarsal cartilage condensation") AnnotationAssertion(Annotation( ) Annotation( ) "pedal digit III metatarsal cartilage element") AnnotationAssertion( "toe 3 metatarsal cartilage element") AnnotationAssertion(Annotation( "NCBITaxon:9606"^^xsd:string) Annotation( "OBOL:accepted"^^xsd:string) Annotation( ) "foot digit 3 metatarsal cartilage element") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010559") AnnotationAssertion(rdfs:label "pedal digit 3 metatarsal cartilage element") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pedal digit 4 metatarsal cartilage element) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A pedal digit metatarsal cartilage element that is part of a pedal digit 4 mesenchyme.") AnnotationAssertion( "EMAPA:18121") AnnotationAssertion(Annotation( "OBOL:accepted"^^xsd:string) "hind limb digit 4 metatarsal cartilage condensation") AnnotationAssertion(Annotation( ) Annotation( ) "pedal digit IV metatarsal cartilage element") AnnotationAssertion( "toe 4 metatarsal cartilage element") AnnotationAssertion(Annotation( "NCBITaxon:9606"^^xsd:string) Annotation( "OBOL:accepted"^^xsd:string) Annotation( ) "foot digit 4 metatarsal cartilage element") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010560") AnnotationAssertion(rdfs:label "pedal digit 4 metatarsal cartilage element") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pedal digit 5 metatarsal cartilage element) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A pedal digit metatarsal cartilage element that is part of a pedal digit 5 mesenchyme.") AnnotationAssertion( "EMAPA:18126") AnnotationAssertion(Annotation( "OBOL:accepted"^^xsd:string) "hind limb digit 5 metatarsal cartilage element") AnnotationAssertion(Annotation( ) Annotation( ) "pedal digit V metatarsal cartilage element") AnnotationAssertion( "toe 5 metatarsal cartilage element") AnnotationAssertion(Annotation( "NCBITaxon:9606"^^xsd:string) Annotation( "OBOL:accepted"^^xsd:string) Annotation( ) "foot digit 5 metatarsal cartilage element") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010561") AnnotationAssertion(rdfs:label "pedal digit 5 metatarsal cartilage element") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pedal digit 1 mesenchyme) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "Mesenchyme that is part of a developing pedal digit 1.") AnnotationAssertion( "EHDAA2:0002039") AnnotationAssertion( "EMAPA:17462") AnnotationAssertion(Annotation( "OBOL:accepted"^^xsd:string) "hind limb digit 1 mesenchyme") AnnotationAssertion(Annotation( ) Annotation( ) "pedal digit I mesenchyme") AnnotationAssertion(Annotation( "NCBITaxon:9606"^^xsd:string) Annotation( "OBOL:accepted"^^xsd:string) Annotation( ) "foot digit 1 mesenchyme") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010562") AnnotationAssertion(rdfs:label "pedal digit 1 mesenchyme") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (manual digit 1 mesenchyme) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "Mesenchyme that is part of a developing manual digit 1.") AnnotationAssertion( "EHDAA2:0000513") AnnotationAssertion( "EMAPA:17431") AnnotationAssertion(Annotation( "OBOL:accepted"^^xsd:string) "fore limb digit 1 mesenchyme") AnnotationAssertion(Annotation( ) Annotation( ) "manual digit I mesenchyme") AnnotationAssertion(Annotation( "NCBITaxon:9606"^^xsd:string) Annotation( "OBOL:accepted"^^xsd:string) Annotation( ) "hand digit 1 mesenchyme") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010564") AnnotationAssertion(rdfs:label "manual digit 1 mesenchyme") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (manual digit 1 metacarpus pre-cartilage condensation) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A manual digit metacarpus pre-cartilage condensation that is part of a manual digit 1 mesenchyme.") AnnotationAssertion( "EHDAA2:0000515") AnnotationAssertion( "EMAPA:17714") AnnotationAssertion(Annotation( "EHDAA2:0000515") "finger 1 metacarpus pre-cartilage condensation") AnnotationAssertion(Annotation( "OBOL:accepted"^^xsd:string) "fore limb digit 1 metacarpus pre-cartilage condensation") AnnotationAssertion(Annotation( ) Annotation( ) "manual digit I metacarpus pre-cartilage condensation") AnnotationAssertion( "metacarpal 1 pre-cartilage condensation") AnnotationAssertion(Annotation( "NCBITaxon:9606"^^xsd:string) Annotation( "OBOL:accepted"^^xsd:string) Annotation( ) "hand digit 1 metacarpus pre-cartilage condensation") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010565") AnnotationAssertion(rdfs:label "manual digit 1 metacarpus pre-cartilage condensation") SubClassOf( ) SubClassOf( ) # Class: (manual digit 2 metacarpus pre-cartilage condensation) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A manual digit metacarpus pre-cartilage condensation that is part of a manual digit 2 mesenchyme.") AnnotationAssertion( "EHDAA2:0000521") AnnotationAssertion( "EMAPA:17716") AnnotationAssertion(Annotation( "EHDAA2:0000521") "finger 2 metacarpus pre-cartilage condensation") AnnotationAssertion(Annotation( "OBOL:accepted"^^xsd:string) "fore limb digit 2 metacarpus pre-cartilage condensation") AnnotationAssertion(Annotation( ) Annotation( ) "manual digit II metacarpus pre-cartilage condensation") AnnotationAssertion( "metacarpal 2 pre-cartilage condensation") AnnotationAssertion(Annotation( "NCBITaxon:9606"^^xsd:string) Annotation( "OBOL:accepted"^^xsd:string) Annotation( ) "hand digit 2 metacarpus pre-cartilage condensation") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010566") AnnotationAssertion(rdfs:label "manual digit 2 metacarpus pre-cartilage condensation") SubClassOf( ) SubClassOf( ) # Class: (manual digit 3 metacarpus pre-cartilage condensation) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A manual digit metacarpus pre-cartilage condensation that is part of a manual digit 3 mesenchyme.") AnnotationAssertion( "EHDAA2:0000527") AnnotationAssertion( "EMAPA:17718") AnnotationAssertion(Annotation( "EHDAA2:0000527") "finger 3 metacarpus pre-cartilage condensation") AnnotationAssertion(Annotation( "OBOL:accepted"^^xsd:string) "fore limb digit 3 metacarpus pre-cartilage condensation") AnnotationAssertion(Annotation( ) Annotation( ) "manual digit III metacarpus pre-cartilage condensation") AnnotationAssertion( "metacarpal 3 pre-cartilage condensation") AnnotationAssertion(Annotation( "NCBITaxon:9606"^^xsd:string) Annotation( "OBOL:accepted"^^xsd:string) Annotation( ) "hand digit 3 metacarpus pre-cartilage condensation") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010567") AnnotationAssertion(rdfs:label "manual digit 3 metacarpus pre-cartilage condensation") SubClassOf( ) SubClassOf( ) # Class: (manual digit 4 metacarpus pre-cartilage condensation) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A manual digit metacarpus pre-cartilage condensation that is part of a manual digit 4 mesenchyme.") AnnotationAssertion( "EHDAA2:0000533") AnnotationAssertion( "EMAPA:17720") AnnotationAssertion(Annotation( "EHDAA2:0000533") "finger 4 metacarpus pre-cartilage condensation") AnnotationAssertion(Annotation( "OBOL:accepted"^^xsd:string) "fore limb digit 4 metacarpus pre-cartilage condensation") AnnotationAssertion(Annotation( ) Annotation( ) "manual digit IV metacarpus pre-cartilage condensation") AnnotationAssertion( "metacarpal 4 pre-cartilage condensation") AnnotationAssertion(Annotation( "NCBITaxon:9606"^^xsd:string) Annotation( "OBOL:accepted"^^xsd:string) Annotation( ) "hand digit 4 metacarpus pre-cartilage condensation") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010568") AnnotationAssertion(rdfs:label "manual digit 4 metacarpus pre-cartilage condensation") SubClassOf( ) SubClassOf( ) # Class: (manual digit 5 metacarpus pre-cartilage condensation) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A manual digit metacarpus pre-cartilage condensation that is part of a manual digit 5 mesenchyme.") AnnotationAssertion( "EHDAA2:0000539") AnnotationAssertion( "EMAPA:17722") AnnotationAssertion(Annotation( "EHDAA2:0000539") "finger 5 metacarpus pre-cartilage condensation") AnnotationAssertion(Annotation( "OBOL:accepted"^^xsd:string) "fore limb digit 5 metacarpus pre-cartilage condensation") AnnotationAssertion(Annotation( ) Annotation( ) "manual digit V metacarpus pre-cartilage condensation") AnnotationAssertion( "metacarpal 5 pre-cartilage condensation") AnnotationAssertion(Annotation( "NCBITaxon:9606"^^xsd:string) Annotation( "OBOL:accepted"^^xsd:string) Annotation( ) "hand digit 5 metacarpus pre-cartilage condensation") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010569") AnnotationAssertion(rdfs:label "manual digit 5 metacarpus pre-cartilage condensation") SubClassOf( ) SubClassOf( ) # Class: (manual digit 1 metacarpus cartilage element) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A manual digit metacarpus cartilage element that is part of a manual digit 1 mesenchyme.") AnnotationAssertion( "EHDAA2:0000514") AnnotationAssertion( "EMAPA:18065") AnnotationAssertion(Annotation( "EHDAA2:0000514") "finger 1 metacarpus cartilage element") AnnotationAssertion(Annotation( "OBOL:accepted"^^xsd:string) "fore limb digit 1 metacarpus cartilage element") AnnotationAssertion(Annotation( ) Annotation( ) "manual digit I metacarpus cartilage element") AnnotationAssertion( "metacarpus 1 cartilage element") AnnotationAssertion(Annotation( "NCBITaxon:9606"^^xsd:string) Annotation( "OBOL:accepted"^^xsd:string) Annotation( ) "hand digit 1 metacarpus cartilage element") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010570") AnnotationAssertion(rdfs:label "manual digit 1 metacarpus cartilage element") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (manual digit 2 metacarpus cartilage element) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A manual digit metacarpus cartilage element that is part of a manual digit 2 mesenchyme.") AnnotationAssertion( "EHDAA2:0000520") AnnotationAssertion( "EMAPA:18070") AnnotationAssertion(Annotation( "EHDAA2:0000520") "finger 2 metacarpus cartilage element") AnnotationAssertion(Annotation( "OBOL:accepted"^^xsd:string) "fore limb digit 2 metacarpus cartilage element") AnnotationAssertion(Annotation( ) Annotation( ) "manual digit II metacarpus cartilage element") AnnotationAssertion( "metacarpus 2 cartilage element") AnnotationAssertion(Annotation( "NCBITaxon:9606"^^xsd:string) Annotation( "OBOL:accepted"^^xsd:string) Annotation( ) "hand digit 2 metacarpus cartilage element") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010571") AnnotationAssertion(rdfs:label "manual digit 2 metacarpus cartilage element") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (manual digit 3 metacarpus cartilage element) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A manual digit metacarpus cartilage element that is part of a manual digit 3 mesenchyme.") AnnotationAssertion( "EHDAA2:0000526") AnnotationAssertion( "EMAPA:18075") AnnotationAssertion(Annotation( "EHDAA2:0000526") "finger 3 metacarpus cartilage element") AnnotationAssertion(Annotation( "OBOL:accepted"^^xsd:string) "fore limb digit 3 metacarpus cartilage element") AnnotationAssertion(Annotation( ) Annotation( ) "manual digit III metacarpus cartilage element") AnnotationAssertion( "metacarpus 3 cartilage element") AnnotationAssertion(Annotation( "NCBITaxon:9606"^^xsd:string) Annotation( "OBOL:accepted"^^xsd:string) Annotation( ) "hand digit 3 metacarpus cartilage element") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010572") AnnotationAssertion(rdfs:label "manual digit 3 metacarpus cartilage element") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (manual digit 4 metacarpus cartilage element) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A manual digit metacarpus cartilage element that is part of a manual digit 4 mesenchyme.") AnnotationAssertion( "EHDAA2:0000532") AnnotationAssertion( "EMAPA:18080") AnnotationAssertion(Annotation( "EHDAA2:0000532") "finger 4 metacarpus cartilage condensation") AnnotationAssertion(Annotation( "OBOL:accepted"^^xsd:string) "fore limb digit 4 metacarpus cartilage element") AnnotationAssertion(Annotation( ) Annotation( ) "manual digit IV metacarpus cartilage element") AnnotationAssertion( "metacarpus 4 cartilage element") AnnotationAssertion(Annotation( "NCBITaxon:9606"^^xsd:string) Annotation( "OBOL:accepted"^^xsd:string) Annotation( ) "hand digit 4 metacarpus cartilage element") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010573") AnnotationAssertion(rdfs:label "manual digit 4 metacarpus cartilage element") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (manual digit 5 metacarpus cartilage element) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A manual digit metacarpus cartilage element that is part of a manual digit 5 mesenchyme.") AnnotationAssertion( "EHDAA2:0000538") AnnotationAssertion( "EMAPA:18085") AnnotationAssertion(Annotation( "EHDAA2:0000538") "finger 5 metacarpus cartilage condensation") AnnotationAssertion(Annotation( "OBOL:accepted"^^xsd:string) "fore limb digit 5 metacarpus cartilage element") AnnotationAssertion(Annotation( ) Annotation( ) "manual digit V metacarpus cartilage element") AnnotationAssertion( "metacarpus 5 cartilage element") AnnotationAssertion(Annotation( "NCBITaxon:9606"^^xsd:string) Annotation( "OBOL:accepted"^^xsd:string) Annotation( ) "hand digit 5 metacarpus cartilage element") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010574") AnnotationAssertion(rdfs:label "manual digit 5 metacarpus cartilage element") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (manual digit 1 phalanx pre-cartilage condensation) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A pre-cartilage condensation that is part of a manual digit 1 mesenchyme.") AnnotationAssertion( "EHDAA2:0000516") AnnotationAssertion( "EMAPA:17715") AnnotationAssertion(Annotation( "OBOL:accepted"^^xsd:string) "fore limb digit 1 phalanx pre-cartilage condensation") AnnotationAssertion(Annotation( ) Annotation( ) "manual digit I phalanx pre-cartilage condensation") AnnotationAssertion(Annotation( "NCBITaxon:9606"^^xsd:string) Annotation( "OBOL:accepted"^^xsd:string) Annotation( ) "hand digit 1 phalanx pre-cartilage condensation") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010575") AnnotationAssertion(rdfs:label "manual digit 1 phalanx pre-cartilage condensation") SubClassOf( ) SubClassOf( ) # Class: (manual digit 2 phalanx pre-cartilage condensation) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A pre-cartilage condensation that is part of a manual digit 2 mesenchyme.") AnnotationAssertion( "EHDAA2:0000522") AnnotationAssertion( "EMAPA:17717") AnnotationAssertion(Annotation( "OBOL:accepted"^^xsd:string) "fore limb digit 2 phalanx pre-cartilage condensation") AnnotationAssertion(Annotation( ) Annotation( ) "manual digit II phalanx pre-cartilage condensation") AnnotationAssertion(Annotation( "NCBITaxon:9606"^^xsd:string) Annotation( "OBOL:accepted"^^xsd:string) Annotation( ) "hand digit 2 phalanx pre-cartilage condensation") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010576") AnnotationAssertion(rdfs:label "manual digit 2 phalanx pre-cartilage condensation") SubClassOf( ) SubClassOf( ) # Class: (manual digit 3 phalanx pre-cartilage condensation) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A pre-cartilage condensation that is part of a manual digit 3 mesenchyme.") AnnotationAssertion( "EHDAA2:0000528") AnnotationAssertion( "EMAPA:17719") AnnotationAssertion(Annotation( "OBOL:accepted"^^xsd:string) "fore limb digit 3 phalanx pre-cartilage condensation") AnnotationAssertion(Annotation( ) Annotation( ) "manual digit III phalanx pre-cartilage condensation") AnnotationAssertion(Annotation( "NCBITaxon:9606"^^xsd:string) Annotation( "OBOL:accepted"^^xsd:string) Annotation( ) "hand digit 3 phalanx pre-cartilage condensation") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010577") AnnotationAssertion(rdfs:label "manual digit 3 phalanx pre-cartilage condensation") SubClassOf( ) SubClassOf( ) # Class: (manual digit 4 phalanx pre-cartilage condensation) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A pre-cartilage condensation that is part of a manual digit 4 mesenchyme.") AnnotationAssertion( "EHDAA2:0000534") AnnotationAssertion( "EMAPA:17721") AnnotationAssertion(Annotation( "OBOL:accepted"^^xsd:string) "fore limb digit 4 phalanx pre-cartilage condensation") AnnotationAssertion(Annotation( ) Annotation( ) "manual digit IV phalanx pre-cartilage condensation") AnnotationAssertion(Annotation( "NCBITaxon:9606"^^xsd:string) Annotation( "OBOL:accepted"^^xsd:string) Annotation( ) "hand digit 4 phalanx pre-cartilage condensation") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010578") AnnotationAssertion(rdfs:label "manual digit 4 phalanx pre-cartilage condensation") SubClassOf( ) SubClassOf( ) # Class: (manual digit 5 phalanx pre-cartilage condensation) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A pre-cartilage condensation that is part of a manual digit 5 mesenchyme.") AnnotationAssertion( "EHDAA2:0000540") AnnotationAssertion( "EMAPA:17723") AnnotationAssertion(Annotation( "OBOL:accepted"^^xsd:string) "fore limb digit 5 phalanx pre-cartilage condensation") AnnotationAssertion(Annotation( ) Annotation( ) "manual digit V phalanx pre-cartilage condensation") AnnotationAssertion(Annotation( "NCBITaxon:9606"^^xsd:string) Annotation( "OBOL:accepted"^^xsd:string) Annotation( ) "hand digit 5 phalanx pre-cartilage condensation") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010579") AnnotationAssertion(rdfs:label "manual digit 5 phalanx pre-cartilage condensation") SubClassOf( ) SubClassOf( ) # Class: (pedal digit 1 phalanx pre-cartilage condensation) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A pre-cartilage condensation that is part of a pedal digit 1 mesenchyme.") AnnotationAssertion( "EHDAA2:0002041") AnnotationAssertion( "EMAPA:17726") AnnotationAssertion(Annotation( "OBOL:accepted"^^xsd:string) "hind limb digit 1 phalanx pre-cartilage condensation") AnnotationAssertion(Annotation( ) Annotation( ) "pedal digit I phalanx pre-cartilage condensation") AnnotationAssertion(Annotation( "NCBITaxon:9606"^^xsd:string) Annotation( "OBOL:accepted"^^xsd:string) Annotation( ) "foot digit 1 phalanx pre-cartilage condensation") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010580") AnnotationAssertion(rdfs:label "pedal digit 1 phalanx pre-cartilage condensation") SubClassOf( ) SubClassOf( ) # Class: (pedal digit 2 phalanx pre-cartilage condensation) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A pre-cartilage condensation that is part of a pedal digit 2 mesenchyme.") AnnotationAssertion( "EHDAA2:0002046") AnnotationAssertion( "EMAPA:17728") AnnotationAssertion(Annotation( "OBOL:accepted"^^xsd:string) "hind limb digit 2 phalanx pre-cartilage condensation") AnnotationAssertion(Annotation( ) Annotation( ) "pedal digit II phalanx pre-cartilage condensation") AnnotationAssertion(Annotation( "NCBITaxon:9606"^^xsd:string) Annotation( "OBOL:accepted"^^xsd:string) Annotation( ) "foot digit 2 phalanx pre-cartilage condensation") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010581") AnnotationAssertion(rdfs:label "pedal digit 2 phalanx pre-cartilage condensation") SubClassOf( ) SubClassOf( ) # Class: (pedal digit 3 phalanx pre-cartilage condensation) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A pre-cartilage condensation that is part of a pedal digit 3 mesenchyme.") AnnotationAssertion( "EHDAA2:0002051") AnnotationAssertion( "EMAPA:17730") AnnotationAssertion(Annotation( "OBOL:accepted"^^xsd:string) "hind limb digit 3 phalanx pre-cartilage condensation") AnnotationAssertion(Annotation( ) Annotation( ) "pedal digit III phalanx pre-cartilage condensation") AnnotationAssertion(Annotation( "NCBITaxon:9606"^^xsd:string) Annotation( "OBOL:accepted"^^xsd:string) Annotation( ) "foot digit 3 phalanx pre-cartilage condensation") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010582") AnnotationAssertion(rdfs:label "pedal digit 3 phalanx pre-cartilage condensation") SubClassOf( ) SubClassOf( ) # Class: (pedal digit 4 phalanx pre-cartilage condensation) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A pre-cartilage condensation that is part of a pedal digit 4 mesenchyme.") AnnotationAssertion( "EHDAA2:0002056") AnnotationAssertion( "EMAPA:17732") AnnotationAssertion(Annotation( "OBOL:accepted"^^xsd:string) "hind limb digit 4 phalanx pre-cartilage condensation") AnnotationAssertion(Annotation( ) Annotation( ) "pedal digit IV phalanx pre-cartilage condensation") AnnotationAssertion(Annotation( "NCBITaxon:9606"^^xsd:string) Annotation( "OBOL:accepted"^^xsd:string) Annotation( ) "foot digit 4 phalanx pre-cartilage condensation") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010583") AnnotationAssertion(rdfs:label "pedal digit 4 phalanx pre-cartilage condensation") SubClassOf( ) SubClassOf( ) # Class: (pedal digit 5 phalanx pre-cartilage condensation) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A pre-cartilage condensation that is part of a pedal digit 5 mesenchyme.") AnnotationAssertion( "EHDAA2:0002061") AnnotationAssertion( "EMAPA:17734") AnnotationAssertion(Annotation( "OBOL:accepted"^^xsd:string) "hind limb digit 5 phalanx pre-cartilage condensation") AnnotationAssertion(Annotation( ) Annotation( ) "pedal digit V phalanx pre-cartilage condensation") AnnotationAssertion(Annotation( "NCBITaxon:9606"^^xsd:string) Annotation( "OBOL:accepted"^^xsd:string) Annotation( ) "foot digit 5 phalanx pre-cartilage condensation") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010584") AnnotationAssertion(rdfs:label "pedal digit 5 phalanx pre-cartilage condensation") SubClassOf( ) SubClassOf( ) # Class: (pedal digit phalanx pre-cartilage condensation) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A pre-cartilage condensation that is part of a pedal digit mesenchyme.") AnnotationAssertion( "EMAPA:32950") AnnotationAssertion( "VHOG:0000952") AnnotationAssertion(Annotation( "VHOG:0000952") "foot phalanx pre-cartilage condensation") AnnotationAssertion(Annotation( "OBOL:accepted"^^xsd:string) "hind limb digit phalanx pre-cartilage condensation") AnnotationAssertion( "hindlimb phalanx pre-cartilage condensation") AnnotationAssertion( "pes phalanx pre-cartilage condensation") AnnotationAssertion(Annotation( "NCBITaxon:9606"^^xsd:string) Annotation( "OBOL:accepted"^^xsd:string) Annotation( ) "foot digit phalanx pre-cartilage condensation") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010585") AnnotationAssertion(rdfs:label "pedal digit phalanx pre-cartilage condensation") SubClassOf( ) SubClassOf( ) SubClassOf( ) # Class: (manual digit phalanx pre-cartilage condensation) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A pre-cartilage condensation that is part of a manual digit mesenchyme.") AnnotationAssertion( "EMAPA:32639") AnnotationAssertion( "VHOG:0000954") AnnotationAssertion(Annotation( "OBOL:accepted"^^xsd:string) "fore limb digit phalanx pre-cartilage condensation") AnnotationAssertion( "forelimb phalanx pre-cartilage condensation") AnnotationAssertion(Annotation( "VHOG:0000954") "hand phalanx pre-cartilage condensation") AnnotationAssertion( "manus phalanx pre-cartilage condensation") AnnotationAssertion(Annotation( "NCBITaxon:9606"^^xsd:string) Annotation( "OBOL:accepted"^^xsd:string) Annotation( ) "hand digit phalanx pre-cartilage condensation") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010586") AnnotationAssertion(rdfs:label "manual digit phalanx pre-cartilage condensation") SubClassOf( ) SubClassOf( ) SubClassOf( ) # Class: (manual digit 1 phalanx cartilage element) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A cartilage element that is part of a manual digit 1 mesenchyme.") AnnotationAssertion( "EMAPA:18066") AnnotationAssertion(Annotation( "OBOL:accepted"^^xsd:string) "fore limb digit 1 phalanx cartilage condensation") AnnotationAssertion(Annotation( ) Annotation( ) "manual digit I phalanx cartilage element") AnnotationAssertion(Annotation( "NCBITaxon:9606"^^xsd:string) Annotation( "OBOL:accepted"^^xsd:string) Annotation( ) "hand digit 1 phalanx cartilage element") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010675") AnnotationAssertion(rdfs:label "manual digit 1 phalanx cartilage element") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (manual digit 2 phalanx cartilage element) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A cartilage element that is part of a manual digit 2 mesenchyme.") AnnotationAssertion( "EMAPA:18071") AnnotationAssertion(Annotation( "OBOL:accepted"^^xsd:string) "fore limb digit 2 phalanx cartilage condensation") AnnotationAssertion(Annotation( ) Annotation( ) "manual digit II phalanx cartilage element") AnnotationAssertion(Annotation( "NCBITaxon:9606"^^xsd:string) Annotation( "OBOL:accepted"^^xsd:string) Annotation( ) "hand digit 2 phalanx cartilage element") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010676") AnnotationAssertion(rdfs:label "manual digit 2 phalanx cartilage element") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (manual digit 3 phalanx cartilage element) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A cartilage element that is part of a manual digit 3 mesenchyme.") AnnotationAssertion( "EMAPA:18076") AnnotationAssertion(Annotation( "OBOL:accepted"^^xsd:string) "fore limb digit 3 phalanx cartilage condensation") AnnotationAssertion(Annotation( ) Annotation( ) "manual digit III phalanx cartilage element") AnnotationAssertion(Annotation( "NCBITaxon:9606"^^xsd:string) Annotation( "OBOL:accepted"^^xsd:string) Annotation( ) "hand digit 3 phalanx cartilage element") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010677") AnnotationAssertion(rdfs:label "manual digit 3 phalanx cartilage element") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (manual digit 4 phalanx cartilage element) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A cartilage element that is part of a manual digit 4 mesenchyme.") AnnotationAssertion( "EMAPA:18081") AnnotationAssertion(Annotation( "OBOL:accepted"^^xsd:string) "fore limb digit 4 phalanx cartilage condensation") AnnotationAssertion(Annotation( ) Annotation( ) "manual digit IV phalanx cartilage element") AnnotationAssertion(Annotation( "NCBITaxon:9606"^^xsd:string) Annotation( "OBOL:accepted"^^xsd:string) Annotation( ) "hand digit 4 phalanx cartilage element") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010678") AnnotationAssertion(rdfs:label "manual digit 4 phalanx cartilage element") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (manual digit 5 phalanx cartilage element) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A cartilage element that is part of a manual digit 5 mesenchyme.") AnnotationAssertion( "EMAPA:18086") AnnotationAssertion(Annotation( "OBOL:accepted"^^xsd:string) "fore limb digit 5 phalanx cartilage condensation") AnnotationAssertion(Annotation( ) Annotation( ) "manual digit V phalanx cartilage element") AnnotationAssertion(Annotation( "NCBITaxon:9606"^^xsd:string) Annotation( "OBOL:accepted"^^xsd:string) Annotation( ) "hand digit 5 phalanx cartilage element") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010679") AnnotationAssertion(rdfs:label "manual digit 5 phalanx cartilage element") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pedal digit 1 phalanx cartilage element) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A cartilage element that is part of a pedal digit 1 mesenchyme.") AnnotationAssertion( "EMAPA:18107") AnnotationAssertion(Annotation( "OBOL:accepted"^^xsd:string) "hind limb digit 1 phalanx cartilage condensation") AnnotationAssertion(Annotation( ) Annotation( ) "pedal digit I phalanx cartilage element") AnnotationAssertion(Annotation( "NCBITaxon:9606"^^xsd:string) Annotation( "OBOL:accepted"^^xsd:string) Annotation( ) "foot digit 1 phalanx cartilage element") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010680") AnnotationAssertion(rdfs:label "pedal digit 1 phalanx cartilage element") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pedal digit 2 phalanx cartilage element) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A cartilage element that is part of a pedal digit 2 mesenchyme.") AnnotationAssertion( "EMAPA:18112") AnnotationAssertion(Annotation( "OBOL:accepted"^^xsd:string) "hind limb digit 2 phalanx cartilage condensation") AnnotationAssertion(Annotation( ) Annotation( ) "pedal digit II phalanx cartilage element") AnnotationAssertion(Annotation( "NCBITaxon:9606"^^xsd:string) Annotation( "OBOL:accepted"^^xsd:string) Annotation( ) "foot digit 2 phalanx cartilage element") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010681") AnnotationAssertion(rdfs:label "pedal digit 2 phalanx cartilage element") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pedal digit 3 phalanx cartilage element) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A cartilage element that is part of a pedal digit 3 mesenchyme.") AnnotationAssertion( "EMAPA:18117") AnnotationAssertion(Annotation( "OBOL:accepted"^^xsd:string) "hind limb digit 3 phalanx cartilage condensation") AnnotationAssertion(Annotation( ) Annotation( ) "pedal digit III phalanx cartilage element") AnnotationAssertion(Annotation( "NCBITaxon:9606"^^xsd:string) Annotation( "OBOL:accepted"^^xsd:string) Annotation( ) "foot digit 3 phalanx cartilage element") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010682") AnnotationAssertion(rdfs:label "pedal digit 3 phalanx cartilage element") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pedal digit 4 phalanx cartilage element) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A cartilage element that is part of a pedal digit 4 mesenchyme.") AnnotationAssertion( "EMAPA:18122") AnnotationAssertion(Annotation( "OBOL:accepted"^^xsd:string) "hind limb digit 4 phalanx cartilage condensation") AnnotationAssertion(Annotation( ) Annotation( ) "pedal digit IV phalanx cartilage element") AnnotationAssertion(Annotation( "NCBITaxon:9606"^^xsd:string) Annotation( "OBOL:accepted"^^xsd:string) Annotation( ) "foot digit 4 phalanx cartilage element") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010683") AnnotationAssertion(rdfs:label "pedal digit 4 phalanx cartilage element") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pedal digit 5 phalanx cartilage element) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A cartilage element that is part of a pedal digit 5 mesenchyme.") AnnotationAssertion( "EMAPA:18127") AnnotationAssertion(Annotation( "OBOL:accepted"^^xsd:string) "hind limb digit 5 phalanx cartilage condensation") AnnotationAssertion(Annotation( ) Annotation( ) "pedal digit V phalanx cartilage element") AnnotationAssertion(Annotation( "NCBITaxon:9606"^^xsd:string) Annotation( "OBOL:accepted"^^xsd:string) Annotation( ) "foot digit 5 phalanx cartilage element") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010684") AnnotationAssertion(rdfs:label "pedal digit 5 phalanx cartilage element") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pedal digit phalanx cartilage element) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A cartilage element that is part of a pedal digit mesenchyme.") AnnotationAssertion( "EMAPA:32948") AnnotationAssertion(Annotation( "OBOL:accepted"^^xsd:string) "hind limb digit phalanx cartilage condensation") AnnotationAssertion(Annotation( "NCBITaxon:9606"^^xsd:string) Annotation( "OBOL:accepted"^^xsd:string) Annotation( ) "foot digit phalanx cartilage element") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010685") AnnotationAssertion(rdfs:label "pedal digit phalanx cartilage element") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (manual digit phalanx cartilage element) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A cartilage element that is part of a manual digit mesenchyme.") AnnotationAssertion( "EMAPA:32658") AnnotationAssertion(Annotation( "OBOL:accepted"^^xsd:string) "fore limb digit phalanx cartilage condensation") AnnotationAssertion(Annotation( "NCBITaxon:9606"^^xsd:string) Annotation( "OBOL:accepted"^^xsd:string) Annotation( ) "hand digit phalanx cartilage condensation") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010686") AnnotationAssertion(rdfs:label "manual digit phalanx cartilage element") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pedal digit metatarsal pre-cartilage condensation) AnnotationAssertion( "EMAPA:32956") AnnotationAssertion( "EMAPA:35568") AnnotationAssertion( "VHOG:0000948") AnnotationAssertion(Annotation( "OBOL:accepted"^^xsd:string) "hind limb digit metatarsal pre-cartilage condensation") AnnotationAssertion( "metatarsal bone pre-cartilage condensation") AnnotationAssertion(Annotation( "VHOG:0000948") "metatarsus pre-cartilage condensation") AnnotationAssertion(Annotation( "NCBITaxon:9606"^^xsd:string) Annotation( "OBOL:accepted"^^xsd:string) Annotation( ) "foot digit metatarsal pre-cartilage condensation") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "EMAPA:32956") "metatarsal pre-cartilage condensation") AnnotationAssertion( "UBERON:0010687") AnnotationAssertion(rdfs:label "pedal digit metatarsal pre-cartilage condensation") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ) # Class: (skeleton of manual acropodium) AnnotationAssertion(Annotation( ) Annotation( "VSAO:0005029") Annotation( "VSAO:NI"^^xsd:string) "The subdivision of the skeleton that consists of all the skeletal elements at the distalmost end of the manual autopodium - i.e. the bones of the hands or their cartilaginous precursors[VSAO,modified].") AnnotationAssertion( ) AnnotationAssertion( "FMA:71337") AnnotationAssertion( "VSAO:0005029") AnnotationAssertion( "all phalanges in forelimb autopod") AnnotationAssertion( "anterior acropodium skeleton") AnnotationAssertion( "fore acropodium skeleton") AnnotationAssertion( "hand digit skeleton") AnnotationAssertion( "manual digit skeleton") AnnotationAssertion(Annotation( "VSAO:0005029") Annotation( "VSAO:NI"^^xsd:string) Annotation( ) "manual phalanges") AnnotationAssertion(Annotation( "FMA:71337") "phalanges of hand") AnnotationAssertion( "phalanges of manus") AnnotationAssertion( "set of manual phalanges") AnnotationAssertion(Annotation( "FMA:71337") "set of phalanges of hand") AnnotationAssertion( "set of phalanges of manus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "VSAO:0005029") Annotation( "VSAO:NI"^^xsd:string) "anterior acropodium") AnnotationAssertion( "UBERON:0010688") AnnotationAssertion(rdfs:label "skeleton of manual acropodium") SubClassOf( ) SubClassOf(Annotation( "PHENOSCAPE:ni"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses(Annotation( "lexical"^^xsd:string) ) # Class: (manual digit 1 epithelium) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An epithelium that is part of a manual digit 1.") AnnotationAssertion( "EHDAA2:0000512") AnnotationAssertion( "EMAPA:17430") AnnotationAssertion(Annotation( "OBOL:accepted"^^xsd:string) "fore limb digit 1 epithelium") AnnotationAssertion(Annotation( ) Annotation( ) "manual digit I epithelium") AnnotationAssertion(Annotation( "NCBITaxon:9606"^^xsd:string) Annotation( "OBOL:accepted"^^xsd:string) Annotation( ) "hand digit 1 epithelium") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010690") AnnotationAssertion(rdfs:label "manual digit 1 epithelium") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pedal digit 1 epithelium) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An epithelium that is part of a pedal digit 1.") AnnotationAssertion( "EHDAA2:0002038") AnnotationAssertion( "EMAPA:17461") AnnotationAssertion(Annotation( "OBOL:accepted"^^xsd:string) "hind limb digit 1 epithelium") AnnotationAssertion(Annotation( ) Annotation( ) "pedal digit I epithelium") AnnotationAssertion(Annotation( "NCBITaxon:9606"^^xsd:string) Annotation( "OBOL:accepted"^^xsd:string) Annotation( ) "foot digit 1 epithelium") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010693") AnnotationAssertion(rdfs:label "pedal digit 1 epithelium") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (mesenchyme of tarsal region) AnnotationAssertion(Annotation( ) "Mesenchyme of the carpal region that contributes to the tarsal skeleton.") AnnotationAssertion( "EMAPA:18502") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010695") AnnotationAssertion(rdfs:label "mesenchyme of tarsal region") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (skeleton of pedal acropodium) AnnotationAssertion(Annotation( ) "The subdivision of the skeleton that consists of all the skeletal elements at the distalmost end of the pedal autopodium - i.e. the bones of the foot or their cartilaginous precursors[cjm].") AnnotationAssertion( ) AnnotationAssertion( "FMA:78512") AnnotationAssertion( "VSAO:0005030") AnnotationAssertion( "all phalanges in hindlimb autopod") AnnotationAssertion( "foot digit skeleton") AnnotationAssertion( "hind acropodium skeleton") AnnotationAssertion(Annotation( "VSAO:0005030") Annotation( "VSAO:NI"^^xsd:string) "pedal phalanges") AnnotationAssertion(Annotation( "FMA:78512") "phalanges of foot") AnnotationAssertion( "phalanges of pes") AnnotationAssertion( "posterior acropodium skeleton") AnnotationAssertion( "set of pedal phalanges") AnnotationAssertion(Annotation( "FMA:78512") "set of phalanges of foot") AnnotationAssertion( "set of phalanges of pes") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "VSAO:0005030") Annotation( "VSAO:NI"^^xsd:string) "posterior acropodium") AnnotationAssertion( "UBERON:0010696") AnnotationAssertion(rdfs:label "skeleton of pedal acropodium") SubClassOf( ) SubClassOf(Annotation( "PHENOSCAPE:ni"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pedal digit metatarsal cartilage element) AnnotationAssertion( "EMAPA represents the specific child classes as being part of the digit mesenchyme - we follow this although for the fully formed structure we represent the metatarsals as adjoining rather than being part of the digit skeleton") AnnotationAssertion( "EMAPA:32951") AnnotationAssertion(Annotation( "OBOL:accepted"^^xsd:string) "hind limb digit metatarsal cartilage condensation") AnnotationAssertion(Annotation( "NCBITaxon:9606"^^xsd:string) Annotation( "OBOL:accepted"^^xsd:string) Annotation( ) "foot digit metatarsal cartilage condensation") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "EMAPA:32951") "metatarsal cartilage condensation") AnnotationAssertion( "UBERON:0010697") AnnotationAssertion(rdfs:label "pedal digit metatarsal cartilage element") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (manual digit metacarpus pre-cartilage condensation) AnnotationAssertion( "EMAPA:32850") AnnotationAssertion( "VHOG:0000953") AnnotationAssertion(Annotation( "OBOL:accepted"^^xsd:string) "fore limb digit metacarpus pre-cartilage condensation") AnnotationAssertion(Annotation( "VHOG:0000953") "metacarpal bone pre-cartilage condensation") AnnotationAssertion( "metacarpal pre-cartilage condensation") AnnotationAssertion(Annotation( "VHOG:0000953") "metacarpus pre-cartilage condensation") AnnotationAssertion(Annotation( "NCBITaxon:9606"^^xsd:string) Annotation( "OBOL:accepted"^^xsd:string) Annotation( ) "hand digit metacarpus pre-cartilage condensation") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010698") AnnotationAssertion(rdfs:label "manual digit metacarpus pre-cartilage condensation") SubClassOf( ) SubClassOf( ) # Class: (manual digit metacarpus cartilage element) AnnotationAssertion( "EMAPA:32849") AnnotationAssertion( "finger metacarpus cartilage element") AnnotationAssertion(Annotation( "OBOL:accepted"^^xsd:string) "fore limb digit metacarpus cartilage element") AnnotationAssertion( "metacarpal cartilage element") AnnotationAssertion( "metacarpus cartilage element") AnnotationAssertion(Annotation( "NCBITaxon:9606"^^xsd:string) Annotation( "OBOL:accepted"^^xsd:string) Annotation( ) "hand digit metacarpus cartilage element") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "EMAPA:32849") "metacarpal cartilage condensation") AnnotationAssertion( "UBERON:0010699") AnnotationAssertion(rdfs:label "manual digit metacarpus cartilage element") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (phalanx pre-cartilage condensation) AnnotationAssertion( "EMAPA:32720") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010700") AnnotationAssertion(rdfs:label "phalanx pre-cartilage condensation") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "EMAPA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (phalanx cartilage element) AnnotationAssertion( "EMAPA:32721") AnnotationAssertion(Annotation( "EMAPA:32721") "phalanx cartilage condensation") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010701") AnnotationAssertion(rdfs:label "phalanx cartilage element") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (digit mesenchyme) AnnotationAssertion(Annotation( ) "Mesenchyme of the digit region.") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:32719") AnnotationAssertion( "NCIT:C34141") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NCIT:C34141") "digital ray") AnnotationAssertion( "UBERON:0010702") AnnotationAssertion(rdfs:label "digit mesenchyme") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (forelimb zeugopod skeleton) AnnotationAssertion(Annotation( ) "The collection of all skeletal elements in an forelimb zeugopod region.") AnnotationAssertion( "adding proxinally_connected_to humerus causes inconsistencies - requires investigation") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0000200") Annotation( "AAO"^^xsd:string) Annotation( "AAO:LAP"^^xsd:string) "Segment of the forearm corresponding to the radius and ulna.[AAO]") AnnotationAssertion( "AAO:0000200") AnnotationAssertion( "FMA:71199") AnnotationAssertion( "VSAO:0005011") AnnotationAssertion( "antebrachial skeleton") AnnotationAssertion(Annotation( "PHENOSCAPE:ni") "antebrachium skeleton") AnnotationAssertion(Annotation( "VSAO:0005011") Annotation( "VSAO:NI"^^xsd:string) "anterior zeugopodium skeleton") AnnotationAssertion( "fore epipodium skeleton") AnnotationAssertion(Annotation( "FMA:71199") "forearm skeleton") AnnotationAssertion(Annotation( "FMA:71199") Annotation( ) "skeleton of forearm") AnnotationAssertion(Annotation( "NCBITaxon:8782"^^xsd:string) Annotation( "OBOL:automatic"^^xsd:string) Annotation( ) "wing zeugopod skeleton") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "VSAO:0005011") Annotation( "VSAO:NI"^^xsd:string) "anterior zeugopodium") AnnotationAssertion(Annotation( "AAO:0000200") "fore epipodium") AnnotationAssertion(Annotation( "VSAO:0005011") Annotation( "VSAO:NI"^^xsd:string) "forelimb epipodium") AnnotationAssertion( "forelimb epipodium skeleton") AnnotationAssertion(Annotation( "ISBN:0226313409") Annotation( ) "mesomere 2 of pectoral appendage") AnnotationAssertion( "radius and ulna") AnnotationAssertion( "UBERON:0010703") AnnotationAssertion(rdfs:label "forelimb zeugopod skeleton") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses(Annotation( "lexical"^^xsd:string) ) # Class: (parenchyma of quadrate lobe of liver) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A liver parenchyma that is part of a quadrate lobe of liver.") AnnotationAssertion( "EHDAA2:0001014") AnnotationAssertion( "EMAPA:18320") AnnotationAssertion( "FMA:71676") AnnotationAssertion(Annotation( "EHDAA2:0001014") "liver right quadrate lobe parenchyma") AnnotationAssertion(Annotation( "EMAPA:18320") "parenchyma of quadrate lobe") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010704") AnnotationAssertion(rdfs:label "parenchyma of quadrate lobe of liver") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (parenchyma of caudate lobe of liver) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A liver parenchyma that is part of a caudate lobe of liver.") AnnotationAssertion( "EHDAA2:0001007") AnnotationAssertion( "EMAPA:18315") AnnotationAssertion( "FMA:71659") AnnotationAssertion(Annotation( "EHDAA2:0001007") "liver right caudate lobe parenchyma") AnnotationAssertion(Annotation( "EMAPA:18315") "parenchyma of caudate lobe") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010706") AnnotationAssertion(rdfs:label "parenchyma of caudate lobe of liver") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (appendage girdle complex) AnnotationAssertion(Annotation( ) Annotation( ) "An organism subdivision that includes both an appendage and its associated girdle region. Note that this includes both the skeletal elements and associated tissues (integument, muscle, etc).") AnnotationAssertion( "It is still called a complex when one of the two parts is missing (?) There are fossil fishes with only an outgrowth (no record of a girdle), including thelodonts (which have a suprabranchial fin) as well as some anaspids which have a distinctive 'paired fin' (with differing published assertions on whether it's homologous to a pec fin or pelvic fin or both or neither). There are many fishes and other vertebrates with only a girdle and no outgrowth.[VSAO]") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "VSAO:0000214") Annotation( "VSAO"^^xsd:string) Annotation( "GO_REF:0000034, http://dx.plos.org/10.1371/journal.pone.0051070") "Anatomical group that consists of the soft and skeletal tissues of the appendicular region of the body and the appendage proper.[VSAO]") AnnotationAssertion(Annotation( "2012-09-06"^^xsd:string) Annotation( "VSAO:0000214") Annotation( "VSAO"^^xsd:string) Annotation( "Curator"^^xsd:string) "It is still called a complex when one of the two parts is missing (?) There are fossil fishes with only an outgrowth (no record of a girdle), including thelodonts (which have a suprabranchial fin) as well as some anaspids which have a distinctive 'paired fin' (with differing published assertions on whether it's homologous to a pec fin or pelvic fin or both or neither). There are many fishes and other vertebrates with only a girdle and no outgrowth.[VSAO]") AnnotationAssertion(Annotation( "FMA"^^xsd:string) "note that the FMA uses the term 'limb' to refer to the entire appendage complex (free limb plus girdle region)") AnnotationAssertion( "haendel") AnnotationAssertion( "2012-04-23T10:46:51Z") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37858") AnnotationAssertion( "FMA:7182") AnnotationAssertion( "VSAO:0000214") AnnotationAssertion(Annotation( ) "appendage complex") AnnotationAssertion(Annotation( ) "appendage-girdle complex") AnnotationAssertion(Annotation( "VSAO:0000214") "appendage/girdle complex") AnnotationAssertion(Annotation( ) "girdle plus limb or fin") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:7182") Annotation( ) "limb") AnnotationAssertion( "UBERON:0010707") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "appendage girdle complex") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pectoral complex) AnnotationAssertion(Annotation( "VSAO:0000213") "Appendage girdle complex that when present, encompasses the pectoral appendicular skeleton and the pectoral girdle.") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "VSAO:0000213") Annotation( "VSAO"^^xsd:string) Annotation( "VSAO:MAH") "Appendage girdle complex that when present, encompasses the pectoral appendage and half of the pectoral girdle.[VSAO]") AnnotationAssertion(Annotation( "FMA"^^xsd:string) "note that the FMA uses the terms 'upper limb' and 'lower limb' to refer to the entire appendage complex (free limb plus girdle region)") AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37860") AnnotationAssertion( "FMA:7183") AnnotationAssertion( "VSAO:0000213") AnnotationAssertion(Annotation( "VSAO:0000213") "pectoral appendage/girdle complex") AnnotationAssertion(Annotation( ) "pectoral girdle plus anterior limb or fin") AnnotationAssertion(Annotation( ) "pectoral girdle plus pectoral limb or fin") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:7183") Annotation( ) "upper limb") AnnotationAssertion(Annotation( ) Annotation( ) "upper limb and pectoral girdle") AnnotationAssertion(Annotation( ) "upper limb and shoulder") AnnotationAssertion( "UBERON:0010708") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "pectoral complex") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pelvic complex) AnnotationAssertion(Annotation( "VSAO:0000215") "Appendage girdle complex that when present, encompasses the pelvic appendicular skeleton and the pelvic girdle.") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "VSAO:0000215") Annotation( "VSAO"^^xsd:string) Annotation( "VSAO:MAH") "Appendage girdle complex that when present, encompasses the pelvic appendage and the pelvic girdle.[VSAO]") AnnotationAssertion(Annotation( "FMA"^^xsd:string) "note that the FMA uses the terms 'upper limb' and 'lower limb' to refer to the entire appendage complex (free limb plus girdle region). Note the MA class 'hindlimb' may also belong here") AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37863") AnnotationAssertion( "FMA:7184") AnnotationAssertion( "VSAO:0000215") AnnotationAssertion(Annotation( "VSAO:0000215") "pelvic appendage/girdle complex") AnnotationAssertion(Annotation( ) "pelvic girdle plus pelvic limb or fin") AnnotationAssertion(Annotation( ) "pelvic girdle plus posterior limb or fin") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:7184") Annotation( ) "lower limb") AnnotationAssertion(Annotation( ) Annotation( ) "lower limb and pelvic girdle") AnnotationAssertion(Annotation( ) "lower limb and pelvis") AnnotationAssertion( "UBERON:0010709") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "pelvic complex") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (limb skeleton subdivision) AnnotationAssertion(Annotation( "VSAO:0005018") Annotation( "VSAO:NI"^^xsd:string) "Skeletal subdivision that is a segment of the limb skeleton.") AnnotationAssertion( "note the distinction between this and skeleton of limb") AnnotationAssertion( "VSAO:0005018") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010712") AnnotationAssertion(rdfs:label "limb skeleton subdivision") SubClassOf( ) SubClassOf(Annotation( "VSAO"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (iliac cartilage element) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An iliac endochondral element that is composed primarily of cartilage tissue.") AnnotationAssertion( "EHDAA2:0000808") AnnotationAssertion( "EMAPA:18347") AnnotationAssertion( "VHOG:0001126") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "EMAPA:18347") "iliac cartilage condensation") AnnotationAssertion( "UBERON:0010714") AnnotationAssertion(rdfs:label "iliac cartilage element") SubClassOf(Annotation( "EHDAA2"^^xsd:string) ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (pubic cartilage element) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A pubic endochondral element that is composed primarily of cartilage tissue.") AnnotationAssertion( "EHDAA2:0001573") AnnotationAssertion( "EMAPA:26928") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "EMAPA:26928") "pubic cartilage condensation") AnnotationAssertion( "UBERON:0010718") AnnotationAssertion(rdfs:label "pubic cartilage element") SubClassOf(Annotation( "EHDAA2"^^xsd:string) ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (girdle skeleton) AnnotationAssertion(Annotation( ) "The subdivision of the skeleton of either the pectoral or pelvic girdle.") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "VSAO:0000302") Annotation( "VSAO"^^xsd:string) Annotation( "GO_REF:0000034, http://dx.plos.org/10.1371/journal.pone.0051070") "Skeletal subdivision that is part of the appendage girdle region.[VSAO]") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "VSAO:0000302") Annotation( "VSAO"^^xsd:string) "relationship type change: subclass skeletal subdivision (VSAO:0000042) CHANGED TO: part_of subdivision of skeleton (UBERON:0010912)[VSAO]") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "VSAO:0000302") Annotation( "VSAO"^^xsd:string) "relationship type change: subclass skeletal subdivision (VSAO:0000042) CHANGED TO: proximally_connected_to subdivision of skeleton (UBERON:0010912)[VSAO]") AnnotationAssertion( "AAO:0010686") AnnotationAssertion( "VSAO:0000302") AnnotationAssertion( "skeleton of girdle") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010719") AnnotationAssertion(rdfs:label "girdle skeleton") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (hindlimb zeugopod skeleton) AnnotationAssertion(Annotation( ) "Subdivision of skeleton consisting of all skeletal elements in an hindlimb zeugopod region. Typically consists of the tibia and the fibula.") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0000216") Annotation( "AAO"^^xsd:string) Annotation( "AAO:LAP"^^xsd:string) "Segment of the leg corresponding to the tibia and fibula.[AAO]") AnnotationAssertion( "AAO:0000216") AnnotationAssertion( "VSAO:0005014") AnnotationAssertion(Annotation( ) "crural skeleton") AnnotationAssertion(Annotation( "PHENOSCAPE:ni") "crus skeleton") AnnotationAssertion( "hindlimb zygopod skeleton") AnnotationAssertion( "posterior zeugopodium skeleton") AnnotationAssertion(Annotation( "NominaAnatomicaVeterinaria:2005"^^xsd:string) Annotation( ) "skeleton cruris") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "AAO:0000216") "hind epipodium") AnnotationAssertion(Annotation( "VSAO:0005014") Annotation( "VSAO:NI"^^xsd:string) "hindlimb epipodium") AnnotationAssertion(Annotation( "ISBN:0226313409") Annotation( ) "mesomere 2 of pelvic appendage") AnnotationAssertion(Annotation( "VSAO:0005014") Annotation( ) "posterior zeugopodium") AnnotationAssertion( "UBERON:0010720") AnnotationAssertion(rdfs:label "hindlimb zeugopod skeleton") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (distal tarsal bone) AnnotationAssertion(Annotation( ) "There are three cuneiform bones in the human foot: the medial cuneiform the intermediate cuneiform also known as the middle the lateral cuneiform. They are located between the navicular bone and the first, second and third metatarsal bones and are medial to the cuboid bone[WP, unvetted, human specific].") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0000914") Annotation( "AAO"^^xsd:string) Annotation( "AAO:LAP"^^xsd:string) "Series of elements that articulate with the metatarsals.[AAO]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0000914") AnnotationAssertion( "FMA:24517") AnnotationAssertion( "NCIT:C32416") AnnotationAssertion(Annotation( "ncithesaurus:Cuneiform_Bone_of_the_Foot") "UMLS:C1511560") AnnotationAssertion(Annotation( "FMA:24517") "cuneiform bone") AnnotationAssertion(Annotation( "AAO:0000914") "distal tarsal") AnnotationAssertion( "distal tarsal bone") AnnotationAssertion( "os cuneiform") AnnotationAssertion( "os cuneiforme") AnnotationAssertion( "uberon") AnnotationAssertion( "cuneiform") AnnotationAssertion( "UBERON:0010721") AnnotationAssertion(rdfs:label "distal tarsal bone") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/9/9e/Gray268.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (accessory bone) AnnotationAssertion(Annotation( ) "A bone which does not occur frequently in the body but is still present in a significantly large number of organisms.") AnnotationAssertion( ) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010722") AnnotationAssertion(rdfs:label "accessory bone") SubClassOf( ) # Class: (os vesalianum pedis) AnnotationAssertion(Annotation( ) "An accessory bone located proximal to the base of the fifth metatarsal. Its prevalence has been reported to be from 0.1% to 1.0%. This bone is found within the peroneus brevis tendon and is considered to be asymptomatic in the majority of people.") AnnotationAssertion( "vesalian bone") AnnotationAssertion( ) AnnotationAssertion(Annotation( ) "pedal vesalian bone") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010723") AnnotationAssertion(rdfs:label "os vesalianum pedis") SubClassOf(Annotation( "cjm"^^xsd:string) ) SubClassOf( ) # Class: (lateral tubercle of talus) AnnotationAssertion(Annotation( ) "An accessory bone tubercle which if present lies posterior to the talus.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:33655") AnnotationAssertion(Annotation( ) "accessory talus") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) Annotation( ) "os trigonum") AnnotationAssertion(Annotation( "FMA:33655") "os trigonum of talus") AnnotationAssertion(Annotation( "FMA:33655") "tuberculum laterale (talus)") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010724") AnnotationAssertion(rdfs:label "lateral tubercle of talus") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (accessory navicular bone) AnnotationAssertion(Annotation( ) "An accessory bone of the pes that occasionally develops abnormally in front of the ankle towards the inside of the pes. This bone may be present in approximately 2.5% of the general population and is usually asymptomatic.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010725") AnnotationAssertion(rdfs:label "accessory navicular bone") SubClassOf( ) SubClassOf( ) # Class: (os vesalianum manus) AnnotationAssertion( ) AnnotationAssertion(Annotation( ) "manual vesalian bone") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010726") AnnotationAssertion(rdfs:label "os vesalianum manus") SubClassOf(Annotation( "cjm"^^xsd:string) ) SubClassOf( ) # Class: (sutural bone) AnnotationAssertion(Annotation( ) "A piece of bone that is located within a suture in the cranium.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:59327") AnnotationAssertion(Annotation( "FMA:59327") "Wormian bone") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010727") AnnotationAssertion(rdfs:label "sutural bone") SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (sphenoid lesser wing pre-cartilage condensation) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An orbitosphenoid endochondral element that is composed primarily of a pre-cartilage condensation.") AnnotationAssertion( "EHDAA2:0003449") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010728") AnnotationAssertion(rdfs:label "sphenoid lesser wing pre-cartilage condensation") SubClassOf(Annotation( "EHDAA2"^^xsd:string) ) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (alisphenoid pre-cartilage condensation) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An alisphenoid endochondral element that is composed primarily of a pre-cartilage condensation.") AnnotationAssertion( "EHDAA2:0003448") AnnotationAssertion(Annotation( "EHDAA2:0003448") "sphenoid greater wing pre-cartilage condensation") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010732") AnnotationAssertion(rdfs:label "alisphenoid pre-cartilage condensation") SubClassOf(Annotation( "EHDAA2"^^xsd:string) ) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (alisphenoid cartilage element) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An alisphenoid endochondral element that is composed primarily of cartilage tissue.") AnnotationAssertion( "EHDAA2:0003450") AnnotationAssertion(Annotation( "EHDAA2:0003450") "sphenoid greater wing cartilage condensation") AnnotationAssertion( "uberon") AnnotationAssertion( "alisphenoid cartilage") AnnotationAssertion( "UBERON:0010733") AnnotationAssertion(rdfs:label "alisphenoid cartilage element") SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (distal tarsal bone 4) AnnotationAssertion(Annotation( "VSAO:0005055") "Endochondral tarsal bone articulating with centralia and metatarsal 4.") AnnotationAssertion( "We need to restrict the logical definition such that it is *only* connecting to metatarsal 4") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0000932") Annotation( "AAO"^^xsd:string) Annotation( "AAO:LAP"^^xsd:string) "Small element that articulates anteriorly with metatarsal IV. It may be absent in some taxa.[AAO]") AnnotationAssertion( "NominaAnatomicaVeterinaria uses os cuboideum as an official synonym for distal tarsal IV, but some sources also use this as the label for the human cuboid bone which is regarded to be formed from tarsals IV and V. We therefore decline to use exact syns in either case.") AnnotationAssertion(Annotation( "VSAO:0005055") "distal tarsal 4") AnnotationAssertion(Annotation( "AAO:0000932") "tarsal 4") AnnotationAssertion( "AAO:0000932") AnnotationAssertion( "VSAO:0005055") AnnotationAssertion(Annotation( "NominaAnatomicaVeterinaria:2005"^^xsd:string) Annotation( ) "os tarsale IV") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "VSAO:0005055") "cuboideum") AnnotationAssertion(Annotation( "NominaAnatomicaVeterinaria:2005"^^xsd:string) Annotation( ) "os cuboideum") AnnotationAssertion( "UBERON:0010737") AnnotationAssertion(rdfs:label "distal tarsal bone 4") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (distal tarsal bone 5) AnnotationAssertion(Annotation( "VSAO:0005056") "Endochondral tarsal bone articulating with centralia and metatarsal 5.") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0000933") Annotation( "AAO"^^xsd:string) Annotation( "AAO:Francis_1934") "Small element that articulates anteriorly with metatarsal V. It may be absent in some taxa.[AAO]") AnnotationAssertion( "AAO:0000933") AnnotationAssertion( "VSAO:0005056") AnnotationAssertion(Annotation( "VSAO:0005056") "distal tarsal 5") AnnotationAssertion(Annotation( "AAO:0000933") "tarsal 5") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "VSAO:0005056") "cuboideum") AnnotationAssertion( "UBERON:0010738") AnnotationAssertion(rdfs:comment "We need to restrict the logical definition such that it is *only* connecting to metatarsal 5") AnnotationAssertion(rdfs:label "distal tarsal bone 5") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (distal carpal bone 5) AnnotationAssertion(Annotation( "VSAO:0005047") "Endochondral carpal bone similar to distal carpal 4, but lost in most reptiles and mammals.") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0000851") Annotation( "AAO"^^xsd:string) Annotation( "AAO:LAP"^^xsd:string) "Small element that articulates anteriorly with metacarpal IV(V). It may be fused to carpal 4(3), 5(4), the ulnare, radiale, or other elements.[AAO]") AnnotationAssertion(Annotation( "AAO"^^xsd:string) "lost in most reptiles and mammals[VSAO]. Small element that articulates anteriorly with metacarpal IV(V). It may be fused to carpal 4(3), 5(4), the ulnare, radiale, or other elements") AnnotationAssertion( "AAO:0000851") AnnotationAssertion( "VSAO:0005047") AnnotationAssertion(Annotation( "VSAO:0005047") "distal carpal 5") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "AAO:0000851") "carpal 5") AnnotationAssertion(Annotation( "VSAO:0005047") "hamate") AnnotationAssertion(Annotation( "VSAO:0005047") "os hamatum") AnnotationAssertion(Annotation( "VSAO:0005047") "unciform") AnnotationAssertion(Annotation( "VSAO:0005047") "uncinate") AnnotationAssertion( "UBERON:0010739") AnnotationAssertion(rdfs:label "distal carpal bone 5") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (bone of appendage girdle complex) AnnotationAssertion(Annotation( ) Annotation( "UBERONREF:0000003"^^xsd:string) "A bone that is part of an appendage girdle complex (i.e. any bone in a limb, fin or girdle).") AnnotationAssertion( "EMAPA:35494") AnnotationAssertion( "MA:0000688") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( "UBERONREF:0000003"^^xsd:string) "bone of extended limb/fin region") AnnotationAssertion(Annotation( "MA:0000688") Annotation( "UBERONREF:0000003"^^xsd:string) "limb bone") AnnotationAssertion( "UBERON:0010740") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "bone of appendage girdle complex") SubClassOf( ) SubClassOf(Annotation( "UBERONREF:0000003") ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (bone of pectoral complex) AnnotationAssertion(Annotation( ) Annotation( "UBERONREF:0000003"^^xsd:string) "A bone that is part of a pectoral complex. Examples: scapula, manus phalanx, any carpal bone, any bone of the pectoral fin.") AnnotationAssertion( "considering adding pectoral and pelvic complex skeleton classes") AnnotationAssertion(Annotation( "MA"^^xsd:string) "note that the MA class includes girdle parts so it belongs here;") AnnotationAssertion( "EMAPA:32623") AnnotationAssertion( "EMAPA:35933") AnnotationAssertion( "MA:0000612") AnnotationAssertion(Annotation( "UBERONREF:0000003"^^xsd:string) Annotation( ) "wing bone") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( "UBERONREF:0000003"^^xsd:string) "bone of forelimb or pectoral fin or pectoral girdle") AnnotationAssertion(Annotation( "MA:0000612") Annotation( "UBERONREF:0000003"^^xsd:string) "forelimb bone") AnnotationAssertion( "UBERON:0010741") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "bone of pectoral complex") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (bone of pelvic complex) AnnotationAssertion(Annotation( ) Annotation( "UBERONREF:0000003"^^xsd:string) "A bone that is part of a pelvic complex. Examples: pubis, ischium, fot phalanx, any tarsal bone, any bone of the pelvic fin or girdle.") AnnotationAssertion(Annotation( "MA"^^xsd:string) "the MA class called 'hindlimb bone' belongs here, as it includes bones in the pelvic girdle") AnnotationAssertion( "EMAPA:32633") AnnotationAssertion( "EMAPA:35934") AnnotationAssertion( "MA:0000660") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "MA:0000660") Annotation( "UBERONREF:0000003"^^xsd:string) "hindlimb bone") AnnotationAssertion( "UBERON:0010742") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "bone of pelvic complex") SubClassOf(Annotation( "MA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (meningeal cluster) AnnotationAssertion(Annotation( ) "The collection of all meningeal layers that line a central nervous system.") AnnotationAssertion( "meningeal") AnnotationAssertion( "In some primitive organisms, the meningeal cluster includes only the primitive meninx") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0004661") AnnotationAssertion( "EMAPA:32660") AnnotationAssertion( "FMA:231572") AnnotationAssertion( "NCIT:C12349") AnnotationAssertion( "cerebral meninges") AnnotationAssertion(Annotation( "FMA:231572") "cluster of meninges") AnnotationAssertion(Annotation( "FMA:231572") "meninges") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010743") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "meningeal cluster") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (sacral vertebra pre-cartilage condensation) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A sacral vertebra endochondral element that is composed primarily of a pre-cartilage condensation.") AnnotationAssertion( "EHDAA2:0001774") AnnotationAssertion( "EMAPA:17677") AnnotationAssertion(Annotation( "EHDAA2:0001774") "sacral vertebral pre-cartilage condensation group") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010744") AnnotationAssertion(rdfs:label "sacral vertebra pre-cartilage condensation") SubClassOf( ) SubClassOf( ) # Class: (sacral vertebra cartilage element) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A sacral vertebra endochondral element that is composed primarily of cartilage tissue.") AnnotationAssertion( "EHDAA2:0001773") AnnotationAssertion( "EMAPA:18009") AnnotationAssertion( "sacral vertebral cartilage condensation") AnnotationAssertion(Annotation( "EHDAA2:0001773") "sacral vertebral cartilage condensation group") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010745") AnnotationAssertion(rdfs:label "sacral vertebra cartilage element") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (iliac blade) AnnotationAssertion(Annotation( ) Annotation( "PHENOSCAPE:ad"^^xsd:string) "The extension of the ilium above the level of the acetabulum. Attachment site for both hindlimb and caudal musculature. Medially is the site of attachment of the sacral ribs, where these exist[PHENOSCAPE:ad].") AnnotationAssertion(Annotation( "ad") "Often dorsally expanded in amniotes") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:42826") AnnotationAssertion(Annotation( ) Annotation( ) "a. ossis ilii") AnnotationAssertion(Annotation( "FMA:42826") "ala of ilium") AnnotationAssertion(Annotation( ) Annotation( "FMA:TA"^^xsd:string) Annotation( ) "ala ossis ilii") AnnotationAssertion(Annotation( "FMA:42826") "ilium ala") AnnotationAssertion( "wing of ilium") AnnotationAssertion(Annotation( ) "wing of the ilium") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010746") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "iliac blade") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/a/a1/Gray235.png"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (body of ilium) AnnotationAssertion(Annotation( ) "The body of ilium enters into the formation of the acetabulum, of which it forms rather less than two-fifths. Its external surface is partly articular, partly non-articular; the articular segment forms part of the lunate surface of the acetabulum, the non-articular portion contributes to the acetabular fossa. The internal surface of the body is part of the wall of the lesser pelvis and gives origin to some fibers of the Obturator internus. Below, it is continuous with the pelvic surfaces of the ischium and pubis, only a faint line indicating the place of union.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:42825") AnnotationAssertion(Annotation( "FMA:42825") "ilium body") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "corpus ossis ilii") AnnotationAssertion( "UBERON:0010747") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "body of ilium") SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lymph node follicle) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A lymphoid follicle that is part of a lymph node.") AnnotationAssertion( "EMAPA:35527") AnnotationAssertion( "MA:0000742") AnnotationAssertion( "follicle of lymph node") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010748") AnnotationAssertion(rdfs:label "lymph node follicle") SubClassOf( ) SubClassOf(Annotation( "issues/7") Annotation( "MP-def") ObjectSomeValuesFrom( )) # Class: (middle pharyngeal constrictor) AnnotationAssertion(Annotation( ) "The middle pharyngeal constrictor is a fanshaped muscle, smaller than the Inferior pharyngeal constrictor muscle.") AnnotationAssertion(Annotation( "2012-07-02"^^xsd:string) Annotation( "FEED"^^xsd:string) Annotation( "http://www.feedexp.org"^^xsd:string) "The middle constrictor is a pharyngeal arches 4/6 muscle that participates in oral/pharyngeal behaviors and is innervated by the pharyngeal plexus of Vagus and attaches to the hyoid apparatus and the midline raphe.[FEED]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:46622") AnnotationAssertion( "NCIT:C33115") AnnotationAssertion(Annotation( "ncithesaurus:Middle_Constrictor_Muscle") "UMLS:C1513291") AnnotationAssertion(Annotation( "FMA:46622") "middle constrictor") AnnotationAssertion(Annotation( "FMA:46622") "middle constrictor of pharynx") AnnotationAssertion(Annotation( "FMA:46622") "middle constrictor pharyngeus") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) Annotation( ) "musculus constrictor pharyngis medius") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "constrictor medius") AnnotationAssertion(Annotation( ) "constrictor pharyngis medius") AnnotationAssertion(Annotation( ) "constrictores pharyngis medius") AnnotationAssertion( "hyopharyngeus") AnnotationAssertion(Annotation( ) "middle constrictor") AnnotationAssertion( "middle constrictor muscle") AnnotationAssertion(Annotation( ) "middle pharyngeal constrictor") AnnotationAssertion(Annotation( ) Annotation( ) "musculus constrictor pharyngis medius") AnnotationAssertion( "UBERON:0010749") AnnotationAssertion(rdfs:label "middle pharyngeal constrictor") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/8/8f/Musculusconstrictorpharyngismedius.png"^^xsd:anyURI) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf(Annotation( "pharyngeal plexus") Annotation( "Wikipedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (squamous part of temporal bone primordium) AnnotationAssertion( "EHDAA2:0001907") AnnotationAssertion( "EHDAA:9536") AnnotationAssertion( "squamosal bone primordium") AnnotationAssertion( "squamosal primordium") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010751") AnnotationAssertion(rdfs:label "squamous part of temporal bone primordium") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (exoccipital cartilage element) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An exoccipital endochondral element that is composed primarily of cartilage tissue.") AnnotationAssertion( "EMAPA:18339") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010752") AnnotationAssertion(rdfs:label "exoccipital cartilage element") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lymph node secondary follicle) AnnotationAssertion(Annotation( "CL:tm") "A secondary follicle that is located in a lymph node.") AnnotationAssertion( "EMAPA:35531") AnnotationAssertion( "FMA:312352") AnnotationAssertion( "MA:0000744") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010753") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "lymph node secondary follicle") SubClassOf( ) SubClassOf(Annotation( "MA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (germinal center) AnnotationAssertion(Annotation( ) Annotation( ) Annotation( "CL:tm") "A collection of activated B cells at the center of a secondary follicle, formed after B cells become activated and migrate to the center.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0003671") AnnotationAssertion( "EV:0100051") AnnotationAssertion( "MESH:D018858") AnnotationAssertion( "NCIT:C13337") AnnotationAssertion(Annotation( "ncithesaurus:Germinal_Center") "UMLS:C0282491") AnnotationAssertion(Annotation( "CL:tm") "central zone of follice") AnnotationAssertion(Annotation( "CL:tm") "reaction center of follicle") AnnotationAssertion(Annotation( "CL:tm") "light zone of follicle") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "CL:tm") "lymhpoid nodule") AnnotationAssertion(Annotation( "CL:tm") "nodule") AnnotationAssertion( "UBERON:0010754") AnnotationAssertion(rdfs:comment "A germinal center is a specialized microenvironment formed when activated B cells enter lymphoid follicles. Germinal centers are the foci for B cell proliferation and somatic hypermutation.[GO]") AnnotationAssertion(rdfs:label "germinal center") AnnotationAssertion( "Germinal:center.svg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (secondary follicle corona) AnnotationAssertion(Annotation( ) Annotation( "CL:tm") "The part of the secondary follicle that surrounds the germinal center.") AnnotationAssertion( "consider making terminology consistent amongst subclasses - see https://github.com/obophenotype/uberon/issues/7") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "NCIT:C33053") AnnotationAssertion(Annotation( "ncithesaurus:Mantle_Zone") "UMLS:C1512987") AnnotationAssertion(Annotation( "CL:tm") "inactive zone of follicle") AnnotationAssertion(Annotation( "CL:tm") "peripheral zone of follicle") AnnotationAssertion( "uberon") AnnotationAssertion( "B cell corona") AnnotationAssertion(Annotation( "CL:tm") "dark zone of follicle") AnnotationAssertion( "mantle zone") AnnotationAssertion( "UBERON:0010755") AnnotationAssertion(rdfs:label "secondary follicle corona") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (spleen follicular dendritic cell network) AnnotationAssertion(Annotation( "MP:0008473") "The enmeshed group of antigen presenting cells with extensive dendritic processes in the spleen B cell follicle that present antigen to B cells during an immune response.") AnnotationAssertion(Annotation( "MP:0008473") "FDC network") AnnotationAssertion(Annotation( "MP:0008473") "FDCN") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37963") AnnotationAssertion(Annotation( "MP:0008473") "spleen FDC network") AnnotationAssertion(Annotation( "MP:0008473") "splenic follicular dendritic cell network") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010756") AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "The follicular dendritic cell network is often visualized by using the monoclonal antibody FDC-M2.") AnnotationAssertion(rdfs:label "spleen follicular dendritic cell network") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (rib 8) AnnotationAssertion(Annotation( ) Annotation( "ncithesaurus:Rib_8") "The eighth rib counting from the top of the rib cage down. Note that members of this class are not necessarily homologous[ncit,modified].") AnnotationAssertion( "elements are to be defined spatially/topologically") AnnotationAssertion(Annotation( "PMC1327870") "Typically a false rib in humans but may sometimes be a true one due to sternal attachment") AnnotationAssertion( "8"^^xsd:nonNegativeInteger) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:19536") AnnotationAssertion( "FMA:8120") AnnotationAssertion( "MA:0001408") AnnotationAssertion( "NCIT:C52760") AnnotationAssertion(Annotation( "ncithesaurus:Rib_8") "UMLS:C1709954") AnnotationAssertion(Annotation( ) "costa VIII") AnnotationAssertion(Annotation( "FMA:8120") "eighth rib") AnnotationAssertion(Annotation( "NCBITaxon:9606"^^xsd:string) Annotation( "PMCID:PMC1327870") "upper false rib") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010757") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "rib 8") SubClassOf( ) # Class: (subdivision of organism along appendicular axis) AnnotationAssertion(Annotation( ) "A major subdivision of an organism that divides an organism along an axis perpedicular to the main body anterior-posterior axis. In vertebrates, this is typically a fin or limb segment. In insects, this includes segments of appendages such as antennae, as well as segments of the insect leg.") AnnotationAssertion( "FBbt:00007018") AnnotationAssertion(Annotation( "FBbt:00007018") "appendage segment") AnnotationAssertion( "appendicular segment") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010758") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "subdivision of organism along appendicular axis") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (supraglenoid tubercle) AnnotationAssertion(Annotation( ) "The supraglenoid tubercle is a region of the scapula to which the long head of the biceps brachii muscle attaches.") AnnotationAssertion( ) AnnotationAssertion( "FMA:23263") AnnotationAssertion(Annotation( "FMA:23263") "supraglenoid tuberosity") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "tuberculum supraglenoidale") AnnotationAssertion( "UBERON:0010760") AnnotationAssertion(rdfs:label "supraglenoid tubercle") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/a/a6/Gray205_left_scapula_lateral_view.png"^^xsd:anyURI) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (calcaneum pre-cartilage condensation) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A calcaneum endochondral element that is composed primarily of a pre-cartilage condensation.") AnnotationAssertion( "EMAPA:17736") AnnotationAssertion( "calcaneous pre-cartilage condensation") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010801") AnnotationAssertion(rdfs:label "calcaneum pre-cartilage condensation") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ) # Class: (calcaneum cartilage element) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A calcaneum endochondral element that is composed primarily of cartilage tissue.") AnnotationAssertion( "EMAPA:18143") AnnotationAssertion( "calcaneous cartilage element") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010842") AnnotationAssertion(rdfs:label "calcaneum cartilage element") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (clavicle cartilage element) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A cartilaginous condensation that has the potential to develop into a clavicle.") AnnotationAssertion(Annotation( "ISBN:978-0-12-319060-4") "In most birds and mammals the clavicles are the only dermal elements in the trunk, and is the only membrane bone associated with the pectoral girdle in these taxa. However, there can be secondary cartilage, or subsequent endochondral ossification, or fusion with endochondral elements. In rodents, the lateral ends of the clavicle are endochondral but the main portion is dermal.") AnnotationAssertion( "EMAPA:18342") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010843") AnnotationAssertion(rdfs:label "clavicle cartilage element") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (clavicle pre-cartilage condensation) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A pre-cartilage condensation that has the potential to develop into a clavicle.") AnnotationAssertion(Annotation( "ISBN:978-0-12-319060-4") "In most birds and mammals the clavicles are the only dermal elements in the trunk, and is the only membrane bone associated with the pectoral girdle in these taxa. However, there can be secondary cartilage, or subsequent endochondral ossification, or fusion with endochondral elements. In rodents, the lateral ends of the clavicle are endochondral but the main portion is dermal.") AnnotationAssertion( "EMAPA:18026") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010844") AnnotationAssertion(rdfs:label "clavicle pre-cartilage condensation") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (radius pre-cartilage condensation) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A pre-cartilage condensation that has the potential to develop into a radius bone.") AnnotationAssertion( "still to decide whether this is a distinct pre-cartilage condensation") AnnotationAssertion( "EHDAA2:0001586") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010846") AnnotationAssertion(rdfs:label "radius pre-cartilage condensation") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (ulna pre-cartilage condensation) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A pre-cartilage condensation that has the potential to develop into a ulna.") AnnotationAssertion( "EHDAA2:0002100") AnnotationAssertion( "EHDAA:6226") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010847") AnnotationAssertion(rdfs:label "ulna pre-cartilage condensation") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (radius-ulna cartilage element) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A radius-ulna endochondral element that is composed primarily of cartilage tissue.") AnnotationAssertion(Annotation( "EHDAA2"^^xsd:string) "note that this is not represented as a single unit in EHDAA2") AnnotationAssertion( "EMAPA:17711") AnnotationAssertion(Annotation( "EMAPA:17711") "radio-ulna cartilage condensation") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010848") AnnotationAssertion(rdfs:label "radius-ulna cartilage element") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "EMAPA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (tibia cartilage element) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A cartilaginous condensation that has the potential to develop into a tibia.") AnnotationAssertion( "EMAPA:18155") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010849") AnnotationAssertion(rdfs:label "tibia cartilage element") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "EMAPA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (tibia pre-cartilage condensation) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A pre-cartilage condensation that has the potential to develop into a tibia.") AnnotationAssertion( "EHDAA2:0002036") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010850") AnnotationAssertion(rdfs:label "tibia pre-cartilage condensation") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (fibula cartilage element) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A cartilaginous condensation that has the potential to develop into a fibula.") AnnotationAssertion( "EMAPA:18154") AnnotationAssertion(Annotation( "EMAPA:18154") "fibulal cartilage condensation") AnnotationAssertion(Annotation( "EMAPA:18154") "fibular cartilage condensation") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "EMAPA:18154") "fibulra cartilage condensation") AnnotationAssertion( "UBERON:0010851") AnnotationAssertion(rdfs:label "fibula cartilage element") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "EMAPA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (fibula pre-cartilage condensation) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A pre-cartilage condensation that has the potential to develop into a fibula.") AnnotationAssertion( "EHDAA2:0000509") AnnotationAssertion( "EHDAA:6196") AnnotationAssertion( "fibulal pre-cartilage condensation") AnnotationAssertion( "fibular pre-cartilage condensation") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010852") AnnotationAssertion(rdfs:label "fibula pre-cartilage condensation") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (capitulum of humerus) AnnotationAssertion(Annotation( ) "A smooth, rounded eminence on the lateral portion of the articular surface of the humerus. It articulates with the cupshaped depression on the head of the radius, and is limited to the front and lower part of the bone.") AnnotationAssertion(Annotation( "WP"^^xsd:string) "TODO - check AAO.") AnnotationAssertion( "In birds, where forelimb anatomy has adaptation for flight, its functional if not ontogenetic equivalent is the dorsal condyle of the humerus") AnnotationAssertion( "The Capitulum humeri is present in Carnivora, more distinctly in the cat than in the dog. The Fossa coronoidea, present in the cat is medial to the Fossa radialis and accommodates the Processus coronoideus medialis ulnae when the elbow is flexed. A Foramen supratrochleare occurs in carnivora and occasionally in pig.[NOMINA ANATOMICA VETERINARIA (2005)]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:23373") AnnotationAssertion(Annotation( "FMA:23373") "humeral capitulum") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "capitellum") AnnotationAssertion(Annotation( ) Annotation( ) "capitulum humeri") AnnotationAssertion(Annotation( ) "capitulum of humerus") AnnotationAssertion(Annotation( ) Annotation( ) "dorsal condyle of the humerus") AnnotationAssertion( "UBERON:0010853") AnnotationAssertion(rdfs:label "capitulum of humerus") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/b/b9/Capitulumhumeri.PNG"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (skin of front of neck) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A skin of neck that is part of a throat.") AnnotationAssertion( ) AnnotationAssertion( "FMA:23023") AnnotationAssertion(Annotation( "FMA:23023") "skin of anterior neck") AnnotationAssertion(Annotation( "FMA:23023") "skin of anterior part of neck") AnnotationAssertion(Annotation( "FMA:23023") "skin of anterior portion of neck") AnnotationAssertion( "skin of throat") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010854") AnnotationAssertion(rdfs:label "skin of front of neck") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (inter limb-segment region) AnnotationAssertion( "uberon") AnnotationAssertion( "interlimb") AnnotationAssertion( "UBERON:0010858") AnnotationAssertion(rdfs:comment "Examples - region between digits in a human embryo; segments of a bat's patagium") AnnotationAssertion(rdfs:label "inter limb-segment region") SubClassOf( ) SubClassOf( ObjectIntersectionOf(ObjectMinCardinality(2 ) ObjectMaxCardinality(2 ))) # Class: (tusk) AnnotationAssertion(Annotation( ) "A calcareous tooth that is elongated and protrudes from the mouth.") AnnotationAssertion(Annotation( ) "Elongated, continuously growing front teeth, usually but not always in pairs, that protrude well beyond the mouth of certain mammal species. They are most commonly canines, as with warthogs, pig, and walruses, or, in the case of elephants and narwhals, elongated incisors. In most tusked species both the males and the females have tusks although the males are larger. Tusks are generally curved, though the narwhal's sole tusk is straight and has a helical structure. In the elephant, the tusks were originally second incisors. Continuous growth is enabled by formative tissues in the apical oproperty_value external_definitionof the roots of the teeth") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010879") AnnotationAssertion(rdfs:label "tusk") SubClassOf( ) # Class: (gular fold) AnnotationAssertion(Annotation( ) Annotation( ) "A transverse fold of skin across the throat (Peters 1964).") AnnotationAssertion(Annotation( "gular sac") Annotation( ) ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010238") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "gular sac") AnnotationAssertion(Annotation( ) "gular skin") AnnotationAssertion(Annotation( ) "throat sac") AnnotationAssertion( "UBERON:0010880") AnnotationAssertion(rdfs:label "gular fold") SubClassOf( ) # Class: (limb cartilage element) AnnotationAssertion(Annotation( ) "A skeletal element that is part of a limb and composed of cartilage tissue.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010881") AnnotationAssertion(rdfs:label "limb cartilage element") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (limb bone pre-cartilage condensation) AnnotationAssertion(Annotation( ) "A skeletal element that is part of a limb and composed of pre-cartilage tissue.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010882") AnnotationAssertion(rdfs:label "limb bone pre-cartilage condensation") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (forelimb cartilage element) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A cartilaginous condensation that has the potential to develop into a forelimb bone.") AnnotationAssertion( "EMAPA:32626") AnnotationAssertion(Annotation( "NCBITaxon:8782"^^xsd:string) Annotation( "OBOL:automatic"^^xsd:string) Annotation( ) "forelimb wing cartilaginous condensation") AnnotationAssertion(Annotation( "NCBITaxon:8782"^^xsd:string) Annotation( "OBOL:automatic"^^xsd:string) Annotation( ) "wing cartilaginous condensation") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010883") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "forelimb cartilage element") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (forelimb bone pre-cartilage condensation) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A pre-cartilage condensation that has the potential to develop into a forelimb bone.") AnnotationAssertion( "EMAPA:32625") AnnotationAssertion(Annotation( "NCBITaxon:8782"^^xsd:string) Annotation( "OBOL:automatic"^^xsd:string) Annotation( ) "wing bone pre-cartilage condensation") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010884") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "forelimb bone pre-cartilage condensation") SubClassOf( ) SubClassOf( ) # Class: (hindlimb cartilage element) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A cartilaginous condensation that has the potential to develop into a hindlimb bone.") AnnotationAssertion( "EMAPA:32632") AnnotationAssertion(Annotation( "EMAPA:32632") "hindlimb cartilage condensation") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010885") AnnotationAssertion(rdfs:label "hindlimb cartilage element") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (hindlimb pre-cartilage condensation) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A pre-cartilage condensation that has the potential to develop into a hindlimb bone.") AnnotationAssertion( "EMAPA:32638") AnnotationAssertion(Annotation( "EMAPA:32638") "hindlimb pre-cartilage condensation") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010886") AnnotationAssertion(rdfs:label "hindlimb pre-cartilage condensation") SubClassOf( ) SubClassOf( ) # Class: (tragus) AnnotationAssertion(Annotation( ) "A small pointed eminence of the external ear, situated in front of the concha, and projecting backward over the meatus.") AnnotationAssertion( "The tragus is generally believed to play a role in vertical sound localization in bats") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:60998") AnnotationAssertion( "NCIT:C33801") AnnotationAssertion(Annotation( "ncithesaurus:Tragus") "UMLS:C0229312") AnnotationAssertion(Annotation( "FMA:60998") "tragal part of pinna") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010887") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "tragus") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "Wikipedia-uncited") ObjectSomeValuesFrom( )) # Class: (obsolete seta) AnnotationAssertion(Annotation( "BTO:0004212") "A hair-like unicellular external process of the body wall or any derivative of the latter; a hair; a bristle.") AnnotationAssertion( "BTO:0004212") AnnotationAssertion( "INSECT:0000114") AnnotationAssertion( "MIAA:0000152") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0004212") "bristle") AnnotationAssertion(Annotation( "MIAA:0000152") "chaeta") AnnotationAssertion(Annotation( "MIAA:0000152") "sensory bristle") AnnotationAssertion( "UBERON:0010888") AnnotationAssertion(rdfs:comment "Obsoleted as the term 'seta' refers to a variety of different structures. For insect chaetae, consider the arthropod anatomy ontology.") AnnotationAssertion(rdfs:label "obsolete seta") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (ectethmoid) AnnotationAssertion(Annotation( ) "Either of two lateral parts of the ethmoid bone that form part of the anterior wall of the orbit.") AnnotationAssertion( "In avians, the mesethmoid supports upper beak formation") AnnotationAssertion(Annotation( ) "dorsal nasal capsule") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010889") AnnotationAssertion(rdfs:label "ectethmoid") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pelvic complex muscle) AnnotationAssertion(Annotation( ) "Muscles of the pelvic girdle, hindlimb or pelvic fin.") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0000218") Annotation( "AAO"^^xsd:string) Annotation( "AAO:EJS"^^xsd:string) "Muscles of the pelvic girdle, thigh, leg (crus), and foot (pes).[AAO]") AnnotationAssertion( "AAO:0000218") AnnotationAssertion( "EMAPA:32634") AnnotationAssertion( "FMA:9622") AnnotationAssertion( "MA:0000663") AnnotationAssertion(Annotation( "AAO:0000218") "pelvic girdle and hind limb muscles") AnnotationAssertion(Annotation( ) "pelvic girdle or hind limb muscle") AnnotationAssertion(Annotation( ) "pelvic girdle or posterior limb muscle") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:9622") Annotation( ) "lower limb muscle") AnnotationAssertion(Annotation( "FMA:9622") Annotation( ) "muscle of lower limb") AnnotationAssertion( "muscle of pelvic girdle and leg") AnnotationAssertion( "UBERON:0010890") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "pelvic complex muscle") SubClassOf( ) SubClassOf(Annotation( "prolog"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (pectoral complex muscle) AnnotationAssertion(Annotation( ) "A muscle of a pectoral girdle, pectoral fin or anterior limb.") AnnotationAssertion( "the MA class belongs here, based on its current child classes") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0010687") Annotation( "AAO"^^xsd:string) Annotation( "AAO:EJS"^^xsd:string) "Muscles of the pectoral girdle, arm, forearm, and hand (brachium, antebrachium, manus respectively).[AAO]") AnnotationAssertion( "AAO:0010687") AnnotationAssertion( "EMAPA:32624") AnnotationAssertion( "FMA:9621") AnnotationAssertion( "MA:0000615") AnnotationAssertion(Annotation( "AAO:0010687") "pectoral girdle and fore limb muscles") AnnotationAssertion(Annotation( "NCBITaxon:8782"^^xsd:string) Annotation( ) "muscle of pectoral girdle and wing") AnnotationAssertion(Annotation( "FMA:9621") Annotation( ) "muscle of upper limb") AnnotationAssertion(Annotation( "FMA:9621") Annotation( ) "upper limb muscle") AnnotationAssertion( "uberon") AnnotationAssertion( "muscle of pectoral girdle and limb") AnnotationAssertion( "UBERON:0010891") AnnotationAssertion(rdfs:label "pectoral complex muscle") SubClassOf( ) SubClassOf(Annotation( "prolog"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (mesethmoid element) AnnotationAssertion(Annotation( "ISBN:0073040584"^^xsd:string) "An endochondral element of the nasal capsule that forms septum between nasal capsules and usually remains unossified in mammals.") AnnotationAssertion( ) AnnotationAssertion(Annotation( "check AAO") ) AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0000303") Annotation( "AAO"^^xsd:string) Annotation( "AAO:LAP"^^xsd:string) "Endochondral ossification of the anteromedial portion of the braincase.[AAO]") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0000303") Annotation( "AAO"^^xsd:string) "relationship loss: part_of braincase and otic capsule skeleton (AAO:0000052)[AAO]") AnnotationAssertion(Annotation( "ISBN:0073040584"^^xsd:string) "absent in primitive mammals, ungulates, amphibians, reptiles/birds") AnnotationAssertion( "AAO:0000303") AnnotationAssertion(Annotation( ) "ventral nasal capsule") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "AAO:0000303") "mesethmoid") AnnotationAssertion( "UBERON:0010892") AnnotationAssertion(rdfs:label "mesethmoid element") SubClassOf( ) SubClassOf(Annotation( "TAO"^^xsd:string) ) SubClassOf(Annotation( "ISBN:0073040584"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "TAO"^^xsd:string) ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) SubClassOf(Annotation( "TAO"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (keratinous tooth) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( ) "horny denticle") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010894") AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "The hagfish's jawless mouth contains two parallel rows of pointed keratinous teeth") AnnotationAssertion(rdfs:label "keratinous tooth") SubClassOf( ) # Class: (sequential hermaphroditic organism) AnnotationAssertion(Annotation( "CARO:0000045") "Hermaphroditic organism that produces gametes first of one sex, and then later of the other sex.") AnnotationAssertion( "AAO:0010037") AnnotationAssertion( "BILA:0000045") AnnotationAssertion( "CARO:0000045") AnnotationAssertion( "HAO:0000045") AnnotationAssertion( "TADS:0000608") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "CARO:0000045") "consecutive hermaphroditic organism") AnnotationAssertion( "UBERON:0010895") AnnotationAssertion(rdfs:label "sequential hermaphroditic organism") SubClassOf(Annotation( "CARO"^^xsd:string) ) # Class: (synchronous hermaphroditic organism) AnnotationAssertion(Annotation( "CARO:0000046") "Hermaphroditic organism that produces both male and female gametes at the same time.") AnnotationAssertion( "AAO:0010046") AnnotationAssertion( "BILA:0000046") AnnotationAssertion( "CARO:0000046") AnnotationAssertion( "HAO:0000046") AnnotationAssertion( "TADS:0000609") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "CARO:0000046") "serially hermaphroditic organism") AnnotationAssertion(Annotation( ) "simultaneous hermaphroditic organism") AnnotationAssertion( "UBERON:0010899") AnnotationAssertion(rdfs:label "synchronous hermaphroditic organism") SubClassOf(Annotation( "CARO"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (clavicle bone primordium) AnnotationAssertion(Annotation( ) "A primordium that develops into a clavicle bone.") AnnotationAssertion( "EHDAA2:0000254") AnnotationAssertion( "clavicle primordium") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010905") AnnotationAssertion(rdfs:comment "lateral part derives from a fish dermal bone while the medial part comes from a spur off the manubrium endochondral bone[JB]") AnnotationAssertion(rdfs:label "clavicle bone primordium") SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "mah") Annotation( "shown in mouse") Annotation( "PMC1352163") ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (parafibula) AnnotationAssertion(Annotation( ) "Third bone of the lower leg, normally restricted to the area of the knee, in multuberculates, monotremes and some therians.") AnnotationAssertion( ) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010907") AnnotationAssertion(rdfs:label "parafibula") SubClassOf( ) # Class: (opisthotic) AnnotationAssertion(Annotation( ) Annotation( "AAO:0010835") "Posterior ossification of the otic capsule.") AnnotationAssertion(Annotation( "palaeos") "teleost fishes have a bone which is called the opisthotic. However, it is not homologous to the tetrapod opisthotic and the teleost otic capsule is all of a piece") AnnotationAssertion( "AAO:0010835") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010910") AnnotationAssertion(rdfs:comment "see TAO:0000474 - intercalar \"Small membrane bone homologous with a cartilage bone in more basal fishes (Patterson, 1977). Situated between the exoccipital and the pterotic at point of attachment of short ligament that originates on the ventral arm of the posttemporal.\"") AnnotationAssertion(rdfs:label "opisthotic") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "AAO"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (ossicle) AnnotationAssertion(Annotation( "PSPUB:0000169") Annotation( "VSAO:0000132") "Skeletal element that is often isolated, small, and variable in composition.") AnnotationAssertion( ) AnnotationAssertion( "VSAO:0000132") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010911") AnnotationAssertion(rdfs:comment "Ossicles are composed of a combination skeletal tissues, including bone, calcified cartilage, hyaline cartilage, etc, and exhibit variable development across species. Ossicles are not necessarily jointed, and examples include the menisci of synovial joints, 'Panda's thumb' (radial sesamoid), cardiac skeletal elements, sclerotic bones, middle ear ossicles, and sesamoids.") AnnotationAssertion(rdfs:label "ossicle") SubClassOf(Annotation( "VSAO"^^xsd:string) ) # Class: (subdivision of skeleton) AnnotationAssertion(Annotation( ) Annotation( "UBERONREF:0000003"^^xsd:string) "Anatomical cluster consisting of the skeletal elements (i.e. bone elements, cartilage elements, cartilage condensations) that are part of an individual subdivision of the organism. Excludes joints.") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "VSAO:0000042") Annotation( "incorrect") Annotation( "VSAO"^^xsd:string) Annotation( "VSAO:curator") "Anatomical cluster consisting of the skeletal elements that are part of the skeleton.[VSAO]") AnnotationAssertion( ) AnnotationAssertion( "FMA:23879") AnnotationAssertion( "VSAO:0000042") AnnotationAssertion(Annotation( "VSAO:0000042") "skeletal subdivision") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:23879") "subdivision of skeleton (in vivo)") AnnotationAssertion( "UBERON:0010912") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "subdivision of skeleton") SubClassOf(Annotation( "cjm"^^xsd:string) ) SubClassOf(Annotation( "UBERONREF:0000003") ObjectSomeValuesFrom( )) SubClassOf(Annotation( "VSAO"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (vertebral element) AnnotationAssertion(Annotation( ) Annotation( ) Annotation( "GO_REF:0000034"^^xsd:string) Annotation( "VSAO:0000184") "Skeletal element that forms around the notochord and is part of the vertebral column.") AnnotationAssertion( "we include a distinct subclass for bony vertebra") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001143") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "DOI:10.1016/j.cub.2011.07.014 Janvier P, Comparative anatomy: all vertebrates do have vertebrae. Current Biology (2011)") "In contrast to lampreys and jawed vertebrates, hagfishes were thought to lack vertebrae. Now, long overlooked vertebral rudiments have been analysed in hagfish, suggesting that vertebrae existed in the last common ancestor of all vertebrates.[well established][VHOG]") AnnotationAssertion( "vertebral") AnnotationAssertion( "Typically an endochondral element, in salamanders there is an argument that vertebral development is perichondral and not preformed in cartilage") AnnotationAssertion( "UBERON:0015005") AnnotationAssertion(Annotation( ) "vertebra skeletal element") AnnotationAssertion( "VHOG:0001143") AnnotationAssertion( "VSAO:0000184") AnnotationAssertion(Annotation( ) "vertebra element") AnnotationAssertion(Annotation( ) "vertebra endochondral element") AnnotationAssertion(Annotation( ) "vertebral endochondral element") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010913") AnnotationAssertion(rdfs:label "vertebral element") SubClassOf( ) SubClassOf(Annotation( "VSAO"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "cjm"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (thyrohyoid ligament) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:55135") AnnotationAssertion( "NCIT:C33779") AnnotationAssertion(Annotation( "ncithesaurus:Thyrohyoid_Ligament") "UMLS:C0225534") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010921") AnnotationAssertion(rdfs:label "thyrohyoid ligament") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (median thyrohyoid ligament) AnnotationAssertion(Annotation( ) "The middle thicker part of the thyrohyoid membrane is termed the median thyrohyoid ligament (middle hyothyroid ligament, middle thyrohyoid ligament), its lateral thinner portions are pierced by the superior laryngeal vessels and the internal branch of the superior laryngeal nerve. Its anterior surface is in relation with the Thyreohyoideus, Sternohyoideus, and Omohyoideus, and with the body of the hyoid bone.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:55138") AnnotationAssertion( "NCIT:C33128") AnnotationAssertion(Annotation( "ncithesaurus:Middle_Thyrohyoid_Ligament") "UMLS:C0225535") AnnotationAssertion( "ligamentum thyrohyoideum medianum") AnnotationAssertion(Annotation( "FMA:55138") "middle thyrohyoid ligament") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010925") AnnotationAssertion(rdfs:label "median thyrohyoid ligament") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (lateral thyrohyoid ligament) AnnotationAssertion(Annotation( ) "The lateral thyrohyoid ligament (lateral hyothyroid ligament) is a round elastic cord, which forms the posterior border of the hyothyroid membrane and passes between the tip of the superior cornu of the thyroid cartilage and the extremity of the greater cornu of the hyoid bone. The recurrent laryngeal nerve typical lies lateral to this ligament.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:55139") AnnotationAssertion( "NCIT:C32950") AnnotationAssertion(Annotation( "ncithesaurus:Lateral_Thyrohyoid_Ligament") "UMLS:C0458565") AnnotationAssertion( "ligamentum hyothyreoideum laterale") AnnotationAssertion( "ligamentum thyrohyoideum laterale") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010926") AnnotationAssertion(rdfs:label "lateral thyrohyoid ligament") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (thyroepiglotticus muscle) AnnotationAssertion(Annotation( ) Annotation( ) "Fibers of the thyroarytenoid muscle that continue to the margin of the epiglottis; it closes the inlet to the larynx.") AnnotationAssertion(Annotation( "2012-07-02"^^xsd:string) Annotation( "FEED"^^xsd:string) Annotation( "http://www.feedexp.org"^^xsd:string) "Thexton, see notes from WG2.[FEED]") AnnotationAssertion(Annotation( "FMA"^^xsd:string) "not a distinct muscle in FMA") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:46594") AnnotationAssertion( "NCIT:C33778") AnnotationAssertion(Annotation( "ncithesaurus:Thyroepiglottic_Muscle") "UMLS:C0224182") AnnotationAssertion(Annotation( "FMA:46594") "pars thyroepiglottica (musculus thyroarytenoideus)") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) Annotation( ) "pars thyroepiglottica musculus thyroarytenoidei") AnnotationAssertion(Annotation( "FMA:46594") "thyro-epiglottic part of thyro-arytenoid") AnnotationAssertion( "thyroepiglottic") AnnotationAssertion(Annotation( "FMA:46594") "thyroepiglottic muscle") AnnotationAssertion(Annotation( "FMA:46594") "thyroepiglotticus") AnnotationAssertion( "thyroepiglottus") AnnotationAssertion( "thyroepiglottus muscle") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "pars thyroepiglottica musculi thyroarytenoidei") AnnotationAssertion( "UBERON:0010927") AnnotationAssertion(rdfs:label "thyroepiglotticus muscle") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/6/64/Musculusthyreoarytenoideus.png"^^xsd:anyURI) SubClassOf(Annotation( "ncithesaurus"^^xsd:string) ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (cricopharyngeus muscle) AnnotationAssertion(Annotation( "MFMO:0000009") "The cricopharyngeus is a pharyngeal arch 4/6 muscle that participates in oral/pharyngeal behaviors and is innervated by the pharyngeal plexus and the recurrent laryngeal n. (from Vagus, CN X), and is an integral part of the pharyngeal tube, and attaches to the cricoid cartilage and the midline raphe. It acts as a sphincter between the pharynx and esophagus.") AnnotationAssertion(Annotation( "2012-07-02"^^xsd:string) Annotation( "FEED"^^xsd:string) Annotation( "http://www.feedexp.org"^^xsd:string) "The cricopharyngeus is a pharyngeal arch 4/6 muscle that participates in oral/pharyngeal behaviors and is innervated by the pharyngeal plexus and the recurrent laryngeal n. , and is an integral part of the pharyngeal tube, and attaches to the cricoid cartilage and the midline raphe. It acts as a sphincter between the pharynx and esophagus.[FEED]") AnnotationAssertion( "cricopharyngeal part") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:46661") AnnotationAssertion( "MFMO:0000009") AnnotationAssertion( "NCIT:C32401") AnnotationAssertion(Annotation( "ncithesaurus:Cricopharyngeus_Muscle") "UMLS:C0224214") AnnotationAssertion(Annotation( "FMA:46661") "cricopharyngeal part of inferior constrictor pharyngeus") AnnotationAssertion(Annotation( "FMA:46661") "cricopharyngeal part of inferior pharyngeal constrictor") AnnotationAssertion( "cricopharyngeal part of inferior pharyngeal constrictor muscle") AnnotationAssertion(Annotation( "FMA:46661") "cricopharyngeus") AnnotationAssertion( "cricopharyngeus portion of the inferior pharyngeal constrictor") AnnotationAssertion(Annotation( "FMA:46661") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "musculus cricopharyngeus") AnnotationAssertion(Annotation( "FMA:46661") "pars cricopharyngea (musculus constrictor pharyngis inferior)") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) Annotation( ) "pars cricopharyngea musculus constrictoris pharyngis inferioris") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010928") AnnotationAssertion(rdfs:comment "muscle belly") AnnotationAssertion(rdfs:label "cricopharyngeus muscle") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "Wikipedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (stapedius pre-muscle condensation) AnnotationAssertion( "EHDAA2:0001909") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010929") AnnotationAssertion(rdfs:label "stapedius pre-muscle condensation") SubClassOf(Annotation( "EHDAA2"^^xsd:string) ) SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (interhyoideus) AnnotationAssertion( "may be obsoleted. Muscle between hyoid arches in fish;") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0010649") Annotation( "AAO"^^xsd:string) Annotation( "AAO:BMZ") "One of the principal muscles used in swallowing.[AAO]") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0010649") Annotation( "AAO"^^xsd:string) "relationship loss: subclass hyobranchial muscles (AAO:0000224)[AAO]") AnnotationAssertion( "most extant actinopterygians part of the interhyoideus separates into a distinct muscle during development, the hyohyoideus - http://www.biomedcentral.com/1471-213X/8/24/") AnnotationAssertion( "the [mammalian] interhyoideus is homologous with the simple interhyoideus of early stages of amphibia[Edgeworth, 1935]") AnnotationAssertion( "AAO:0010649") AnnotationAssertion( "interhyoideus muscle") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010930") AnnotationAssertion(rdfs:label "interhyoideus") SubClassOf( ) # Class: (intermandibularis) AnnotationAssertion(Annotation( "ZFA:0000369") "Is a mandibular muscle that develops into the ventral intermandibularis anterior and posterior muscles.") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0010647") Annotation( "AAO"^^xsd:string) Annotation( "AAO:BMZ") "One of the principal muscles used in swallowing.[AAO]") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0010647") Annotation( "AAO"^^xsd:string) "relationship loss: subclass hyobranchial muscles (AAO:0000224)[AAO]") AnnotationAssertion( "AAO:0010647") AnnotationAssertion( "TAO:0000369") AnnotationAssertion( "ZFA:0000369") AnnotationAssertion( "intermandibularis muscle") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "ZFIN:ZDB-PUB-060921-12") "intermandibular muscle") AnnotationAssertion( "UBERON:0010931") AnnotationAssertion(rdfs:label "intermandibularis") SubClassOf( ) # Class: (crico-arytenoid muscle) AnnotationAssertion(Annotation( ) "Cricoarytenoid muscles are muscles that connect the cricoid cartilage and arytenoid cartilage. More specifically, it can refer to: Posterior cricoarytenoid muscle Lateral cricoarytenoid muscle.") AnnotationAssertion( "candidate for obsoletion. See https://github.com/obophenotype/uberon/issues/530") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37498") AnnotationAssertion( "MA:0002283") AnnotationAssertion( "NCIT:C32398") AnnotationAssertion(Annotation( "ncithesaurus:Cricoarytenoid_Muscle") "UMLS:C0448336") AnnotationAssertion(Annotation( ) "crico-arytenoid") AnnotationAssertion(Annotation( ) "cricoarytenoid") AnnotationAssertion(Annotation( ) "cricoarytenoid muscle") AnnotationAssertion( "cricoarytenoideus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010932") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "crico-arytenoid muscle") AnnotationAssertion(rdfs:seeAlso "https://github.com/obophenotype/uberon/issues/530"^^xsd:anyURI) AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/9/96/Gray959.png"^^xsd:anyURI) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf(Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (orbicularis oris muscle) AnnotationAssertion(Annotation( ) Annotation( ) Annotation( ) Annotation( "FEED:rd") Annotation( "MFMO:0000058") "The orbicularis oris is a superficial facial muscle with fibers that encircle the opening of the oral cavity that attaches to the maxilla, mandible, skin and modiolus, and that participates in oral/pharyngeal behaviors, and is innervated by the facial nerve (CN VII).") AnnotationAssertion(Annotation( "2012-07-02"^^xsd:string) Annotation( "FEED"^^xsd:string) Annotation( "http://www.feedexp.org"^^xsd:string) "The orbicularis oris is a superficial facial muscle that attaches to the skin and modiolus, and that participates in oral/pharyngeal behaviors, and is innervated by the facial nerve .[FEED]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:46841") AnnotationAssertion( "MFMO:0000058") AnnotationAssertion(Annotation( "FMA:46841") "orbicularis oris") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "incisivii labii inferioris") AnnotationAssertion(Annotation( ) "incisivii labii superioris") AnnotationAssertion(Annotation( ) Annotation( ) "musculus orbicularis oris") AnnotationAssertion(Annotation( ) "nasolabialis muscle") AnnotationAssertion(Annotation( ) "orbicularis oris") AnnotationAssertion( "UBERON:0010933") AnnotationAssertion(rdfs:label "orbicularis oris muscle") AnnotationAssertion(rdfs:seeAlso "https://github.com/obophenotype/uberon/issues/473"^^xsd:anyURI) AnnotationAssertion( "Orbicularis:oris.jpg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "Maxilla and mandible") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "Maxilla and mandible") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "Skin around the lips") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) DisjointClasses( ) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (tensor tympani pre-muscle condensation) AnnotationAssertion( "EHDAA2:0002002") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010935") AnnotationAssertion(rdfs:label "tensor tympani pre-muscle condensation") SubClassOf(Annotation( "EHDAA2"^^xsd:string) ) SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (thyropharyngeus muscle) AnnotationAssertion( ) AnnotationAssertion( "FMA:46658") AnnotationAssertion(Annotation( "FMA:46658") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "musculus thyropharyngeus") AnnotationAssertion(Annotation( "FMA:46658") "pars thyropharyngea (musculus constrictor pharyngis inferior)") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) Annotation( ) "pars thyropharyngea musculus constrictoris pharyngis inferioris") AnnotationAssertion(Annotation( "FMA:46658") "thyropharyngeal part of inferior constrictor pharyngeus") AnnotationAssertion( "thyropharyngeal part of inferior constrictor pharyngeus muscle") AnnotationAssertion(Annotation( "FMA:46658") "thyropharyngeal part of inferior pharyngeal constrictor") AnnotationAssertion(Annotation( "FMA:46658") "thyropharyngeus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010936") AnnotationAssertion(rdfs:comment "muscle belly") AnnotationAssertion(rdfs:label "thyropharyngeus muscle") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (salpingopharyngeus muscle) AnnotationAssertion(Annotation( ) "The salpingopharyngeus muscle arises from the inferior part of the cartilage of the pharyngotympanic tube (Eustachian tube) in the nasal cavity; it passes downward and blends with the posterior fasciculus of the palatopharyngeus muscle. The salpingopharyngeus is known to raise the pharynx and larynx during deglutition (swallowing) and laterally draws the pharyngeal walls up. In addition, it opens the pharyngeal orifice of the pharyngotympanic tube during swallowing. This allows for the equalization of pressure between the auditory canal and the pharynx. The salpingopharyngeus is innervated by the vagus nerve (CN X) via the pharyngeal plexus.") AnnotationAssertion(Annotation( "2012-07-02"^^xsd:string) Annotation( "FEED"^^xsd:string) Annotation( "http://www.feedexp.org"^^xsd:string) "Salpingopharyngeus is a muscle that attaches to pharyngotympanic tube and the pharynx and is innervated by pharyngeal plexus of CN X and participates in oral/pharyngeal behaviors.[FEED]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:46665") AnnotationAssertion( "NCIT:C33510") AnnotationAssertion(Annotation( "ncithesaurus:Salpingopharyngeus") "UMLS:C1521985") AnnotationAssertion(Annotation( ) "salpingopharyngeus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "musculus salpingopharyngeus") AnnotationAssertion( "UBERON:0010937") AnnotationAssertion(rdfs:label "salpingopharyngeus muscle") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/e/e3/Salpingopharyngeus.png"^^xsd:anyURI) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA-abduced-lr"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "vagus nerve and cranial accessory nerve") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "vagus nerve and cranial accessory nerve") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "lower part of the cartilage of the auditory tube") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "fibers pass downward and blend with the palatopharyngeus muscle to the upper border thyroid cartilage blending with constrictor fibers") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "fibers pass downward and blend with the palatopharyngeus muscle to the upper border thyroid cartilage blending with constrictor fibers") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (muscle belly) AnnotationAssertion(Annotation( "FMA:9719") "belly") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) Annotation( ) "venter") AnnotationAssertion( "FMA:9719") AnnotationAssertion( "STID:29823001") AnnotationAssertion( "belly of muscle") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010938") AnnotationAssertion(rdfs:label "muscle belly") SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (zygomaticomandibularis muscle) AnnotationAssertion(Annotation( "2012-07-02"^^xsd:string) Annotation( "FEED"^^xsd:string) Annotation( "http://www.feedexp.org"^^xsd:string) "The deep masseter is a separable part of the masseter muscle that attaches to lateral surface and/or ventral border of zygomatic arch.[FEED]") AnnotationAssertion(Annotation( "2012-07-02"^^xsd:string) Annotation( "FEED"^^xsd:string) Annotation( "http://www.feedexp.org"^^xsd:string) "The zygomaticomandibularis is a separable part of the masseter muscle that attaches to the medial surface of the zygomatic arch.[FEED]") AnnotationAssertion(Annotation( "FEED:FEED"^^xsd:string) "zygomaticomandibularis") AnnotationAssertion( "zygomaticomandibularis muscle") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FEED:FEED"^^xsd:string) "masseter, deep") AnnotationAssertion( "UBERON:0010939") AnnotationAssertion(rdfs:label "zygomaticomandibularis muscle") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (muscle of digastric group) AnnotationAssertion(Annotation( ) "Either of the two muscles that comprise the digastric group (anterior or posterior).") AnnotationAssertion(Annotation( "FMA"^^xsd:string) "FMA represents this as a muscle belly, but this classification does not work well across mammals (pers. comm., FEED:rd), so we classify this is a distinct muscle organ here.") AnnotationAssertion( ) AnnotationAssertion( "FMA:46297") AnnotationAssertion(Annotation( "FMA:46297") "belly of digastric") AnnotationAssertion(Annotation( "FMA:46297") "digastric belly") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:46297") "belly of digastric muscle") AnnotationAssertion(Annotation( "FMA:46291") "digastric") AnnotationAssertion(Annotation( ) "digastric muscle") AnnotationAssertion(Annotation( ) "digastricus") AnnotationAssertion(Annotation( "FMA:46297") "muscle body proper of digastric") AnnotationAssertion(Annotation( ) Annotation( ) "musculus digastricus") AnnotationAssertion( "UBERON:0010940") AnnotationAssertion(rdfs:label "muscle of digastric group") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (anterior digastric muscle) AnnotationAssertion(Annotation( ) Annotation( "MFMO:0000073") "The anterior digastric is a pharyngeal arch I muscle that participates in oral/pharygeal behaviors and is innervated by the nerve to mylohyoid (a branch of the third division of the trigeminal nerve), is attached to the mandible and to the hyoid apparatus, and it is superficial to mylohyoid muscle.") AnnotationAssertion( ) AnnotationAssertion(Annotation( "2012-07-02"^^xsd:string) Annotation( "FEED"^^xsd:string) Annotation( "http://www.feedexp.org"^^xsd:string) "The anterior digastric is a pharyngeal arch I muscle that participates in oral/pharygeal behaviors and is innervated by the nerve to mylohyoid and superficial to mylohyoid muscle, and lacks the midline raphe.[FEED]") AnnotationAssertion(Annotation( ) "absent in orangutans") AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37405") AnnotationAssertion( "FMA:46302") AnnotationAssertion(Annotation( "FMA:46302") "anterior belly of digastric") AnnotationAssertion( "anterior belly of digastric muscle") AnnotationAssertion( "anterior digastric") AnnotationAssertion( "anterior digastric muscle") AnnotationAssertion(Annotation( "FEED:FEED"^^xsd:string) "digastric, anterior") AnnotationAssertion( "digastricus anterior") AnnotationAssertion( "digastricus anterior belly") AnnotationAssertion( "digastricus, venter rostralis") AnnotationAssertion(Annotation( "FMA:46302") "venter anterior (musculus digastricus)") AnnotationAssertion(Annotation( "FMA:46302") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "venter posterior musculus digastrici anterior") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010943") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "anterior digastric muscle") AnnotationAssertion(rdfs:seeAlso "https://github.com/obophenotype/uberon/issues/538"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "mandibular division (V3) of the trigeminal (CN V) via the mylohyoid nerve") Annotation( "Wikipedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses(Annotation( "lexical"^^xsd:string) ) # Class: (posterior digastric muscle) AnnotationAssertion(Annotation( "MFMO:0000060") "The posterior digastric is a pharyngeal arch II muscle that participates in oral pharyngeal behavior, is innervated by the digastric branch of facial nerve and attaches to the posterior cranial base and the hyoid apparatus. It is found superficial to the mylohyoid muscle.") AnnotationAssertion(Annotation( "2012-07-02"^^xsd:string) Annotation( "FEED"^^xsd:string) Annotation( "http://www.feedexp.org"^^xsd:string) "The posterior digastric is a pharyngeal arch II muscle that participates in oral pharyngeal behavior, is innervated by the digastric branchi of facial nerve and attaches to the posterior cranial base.[FEED]") AnnotationAssertion(Annotation( ) "in orangutans, this muscle attaches to the mandible rather than the hyoid") AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37406") AnnotationAssertion( "FMA:46303") AnnotationAssertion( "MFMO:0000060") AnnotationAssertion(Annotation( "FEED:FEED"^^xsd:string) "digastric, posterior") AnnotationAssertion( "digastricus posterior") AnnotationAssertion( "digastricus posterior belly") AnnotationAssertion( "digastricus, venter caudalis") AnnotationAssertion( "m. digastricus posterior") AnnotationAssertion(Annotation( "FMA:46303") "posterior belly of digastric") AnnotationAssertion( "posterior belly of digastric muscle") AnnotationAssertion( "posterior digastric muscle") AnnotationAssertion(Annotation( "FMA:46303") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "venter posterior musculus digastrici") AnnotationAssertion( "uberon") AnnotationAssertion( "posterior digastric") AnnotationAssertion( "UBERON:0010944") AnnotationAssertion(rdfs:label "posterior digastric muscle") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "digastric branch") Annotation( "FEED"^^xsd:string) Annotation( "Wikipedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (jugulohyoideus muscle) AnnotationAssertion(Annotation( ) "Runs from the processus jugularis to the os stylohyoideum; innervated with the ramus jugulohyoideus from the nervus facialis.") AnnotationAssertion( "uberon") AnnotationAssertion( "jugulohyoid") AnnotationAssertion( "jugulohyoideus") AnnotationAssertion( "musculus jugulohyoideus") AnnotationAssertion( "musculus occipitohyoideus") AnnotationAssertion( "occipitohyoid") AnnotationAssertion( "occipitohyoideus") AnnotationAssertion( "UBERON:0010945") AnnotationAssertion(rdfs:comment "See also: stylohyoid muscle") AnnotationAssertion(rdfs:label "jugulohyoideus muscle") SubClassOf( ) # Class: (occipitofrontalis muscle) AnnotationAssertion(Annotation( ) "The occipitofrontalis or epicranius is a muscle which covers parts of the skull. It consists of two parts or bellies: The occipital belly, near the occipital bone, and the frontal belly, near the frontal bone.") AnnotationAssertion(Annotation( "FMA"^^xsd:string) "A zone of muscle in FMA") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:9624") AnnotationAssertion( "NCIT:C33198") AnnotationAssertion(Annotation( "ncithesaurus:Occipito-frontalis_Muscle") "UMLS:C1518531") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "epicranius") AnnotationAssertion(Annotation( ) Annotation( ) "musculus occipitofrontalis") AnnotationAssertion( "occipito-frontalis") AnnotationAssertion(Annotation( ) "occipitofrontalis") AnnotationAssertion( "UBERON:0010946") AnnotationAssertion(rdfs:label "occipitofrontalis muscle") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/f/fa/Gray378.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (occipitalis) AnnotationAssertion(Annotation( ) "A belly of the occipitofrontalis muscle that is near the occipital bone.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:46758") AnnotationAssertion(Annotation( "FMA:46758") "occipital belly of occipitofrontalis") AnnotationAssertion(Annotation( "FMA:46758") "occipital part of occipitofrontalis") AnnotationAssertion(Annotation( "FMA:46758") "venter occipitalis (musculus occipitofrontalis)") AnnotationAssertion(Annotation( "FMA:46758") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "venter transversa musculi occipitofrontalis occipitalis") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) Annotation( ) "venter transversa musculus occipitofrontalis occipitalis") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010947") AnnotationAssertion(rdfs:label "occipitalis") SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (cleidooccipital muscle) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A muscle organ that attaches_to a clavicle and attaches_to a occipital bone.") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37688") AnnotationAssertion( "MA:0002276") AnnotationAssertion( "NCIT:C52895") AnnotationAssertion( "cleido-occipitalis") AnnotationAssertion( "cleido-occipitalis muscle") AnnotationAssertion(Annotation( "MA:0002276") "cleidooccipital") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010948") AnnotationAssertion(rdfs:comment "Some studies have indicated a supernumerary cleido-occipital muscle more or less separate from the sterno-cleido-mastoid muscle; The frequency of cleido-occipital muscle occurrence has been reported up to 33%") AnnotationAssertion(rdfs:label "cleidooccipital muscle") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (sternooccipital muscle) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A muscle organ that has_muscle_insertion a occipital bone and has_muscle_origin a sternum.") AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37702") AnnotationAssertion( "MA:0002385") AnnotationAssertion( "NCIT:C53069") AnnotationAssertion(Annotation( "ncithesaurus:Sternooccipital") "UMLS:C1710196") AnnotationAssertion(Annotation( "MA:0002385") "sternooccipital") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010949") AnnotationAssertion(rdfs:label "sternooccipital muscle") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (styloauricular muscle) AnnotationAssertion(Annotation( ) "An occasional small muscle extending from the root of the styloid process to the cartilage of the meatus of the ear.") AnnotationAssertion( "mandibulo-auricularis") AnnotationAssertion( "mandibulo-auricularis muscle") AnnotationAssertion( "stylo-auricularis") AnnotationAssertion( "stylo-auricularis muscle") AnnotationAssertion( "styloauricularis") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010950") AnnotationAssertion(rdfs:label "styloauricular muscle") SubClassOf( ) # Class: (interscutular muscle) AnnotationAssertion(Annotation( ) "A muscle that attaches to the base of the ear and to the middle of the skull.") AnnotationAssertion( "interscutularis") AnnotationAssertion( "musculus interscutularis") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010951") AnnotationAssertion(rdfs:label "interscutular muscle") SubClassOf( ) # Class: (frontalis muscle belly) AnnotationAssertion(Annotation( ) "A belly of the occipitofrontalis muscle that is near the frontal bone.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:46757") AnnotationAssertion(Annotation( "FMA:46757") "frontal belly of occipitofrontalis") AnnotationAssertion(Annotation( "FMA:46757") "frontal part of occipitofrontalis") AnnotationAssertion(Annotation( "FMA:46757") "frontalis") AnnotationAssertion(Annotation( ) "frontalis muscke") AnnotationAssertion(Annotation( ) "orbito-temporo-auricularis") AnnotationAssertion(Annotation( "FMA:46757") "venter frontalis (musculus occipitofrontalis)") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) Annotation( ) "venter frontalis musculus occipitofrontalis") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "frontal belly of occipitofrontalis muscle") AnnotationAssertion(Annotation( ) Annotation( ) "venter frontalis musculi occipitofrontalis") AnnotationAssertion( "UBERON:0010952") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "frontalis muscle belly") AnnotationAssertion( "Musculus:frontalis.png"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (nasalis muscle) AnnotationAssertion(Annotation( ) "The nasalis (compressor naris) is a sphincter-like muscle of the nose whose function is to compress the nasal cartilage. It consists of two parts, transverse and alar: The transverse part arises from the maxilla, above and lateral to the incisive fossa; its fibers proceed upward and medially, expanding into a thin aponeurosis which is continuous on the bridge of the nose with that of the muscle of the opposite side, and with the aponeurosis of the Procerus. The alar part is attached at one end to the greater alar cartilage, and at the other to the integument at the point of the nose. Other sources divide it into 'Compressor nasalis' and 'Dilator nasalis'.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:46770") AnnotationAssertion(Annotation( "FMA:46770") "nasalis") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "compressor naris") AnnotationAssertion(Annotation( ) "compressor narium minor") AnnotationAssertion(Annotation( ) "compressor nasi") AnnotationAssertion(Annotation( ) Annotation( ) "musculus nasalis") AnnotationAssertion( "UBERON:0010953") AnnotationAssertion(rdfs:label "nasalis muscle") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/b/bb/Nasalis.png"^^xsd:anyURI) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ) SubClassOf(Annotation( "FMA-abduced-lr"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (ceratohyoideus muscle) AnnotationAssertion(Annotation( ) "The ceratohyoideus is a muscle of Pharyngeal Arch III that participates in oral/pharyngeal behaviors and is innervated by the glossopharyngeal n. , and attaches to the ceratohyal part of the hyoid apparatus and also to a non-ceratohyal part of the hyoid apparatus.[FEED].") AnnotationAssertion(Annotation( "2012-07-02"^^xsd:string) Annotation( "FEED"^^xsd:string) Annotation( "http://www.feedexp.org"^^xsd:string) "The ceratohyoideus is a muscle of Pharyngeal Arch III that participates in oral/pharyngeal behaviors and is innervated by the glossopharyngeal n. , and attaches to the ceratohyal part of the hyoid apparatus and also to a non-ceratohyal part of the hyoid apparatus.[FEED]") AnnotationAssertion( "MFMO:0000006") AnnotationAssertion(Annotation( "FEED:FEED"^^xsd:string) "ceratohyoideus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010954") AnnotationAssertion(rdfs:label "ceratohyoideus muscle") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (trapezius pre-muscle mass) AnnotationAssertion( "EHDAA2:0002079") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010955") AnnotationAssertion(rdfs:label "trapezius pre-muscle mass") SubClassOf(Annotation( "EHDAA2"^^xsd:string) ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (pterygopharyngeal part of superior pharyngeal constrictor) AnnotationAssertion( "FMA:46638") AnnotationAssertion(Annotation( "FMA:46638") "pars pterygopharyngea (musculus constrictor pharyngis superior)") AnnotationAssertion(Annotation( "FMA:46638") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "pars pterygopharyngea musculus constrictoris pharyngis superioris") AnnotationAssertion(Annotation( "FMA:46638") "pterygopharyngeal part of superior constrictor pharyngeus") AnnotationAssertion( "uberon") AnnotationAssertion( "pterygopharyngeus") AnnotationAssertion( "UBERON:0010956") AnnotationAssertion(rdfs:label "pterygopharyngeal part of superior pharyngeal constrictor") SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (arytenoid muscle) AnnotationAssertion(Annotation( ) "A single muscle, filling up the posterior concave surfaces of the arytenoid cartilages. It arises from the posterior surface and lateral border of one arytenoid cartilage, and is inserted into the corresponding parts of the opposite cartilage. It consists of oblique and transverse parts.") AnnotationAssertion( "TODO - check child relationships") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "NCIT:C32149") AnnotationAssertion(Annotation( "ncithesaurus:Arytenoid_Muscle") "UMLS:C1510945") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "aryepiglotticus muscle") AnnotationAssertion(Annotation( ) "arytaenoideus") AnnotationAssertion(Annotation( ) Annotation( ) "arytaenoideus") AnnotationAssertion(Annotation( ) "arytaenoideus muscle") AnnotationAssertion( "UBERON:0010958") AnnotationAssertion(rdfs:label "arytenoid muscle") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/5/52/Musculusarytenoideus.png"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "recurrent laryngeal branch of the vagus") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "Arytenoid cartilage on one side") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "Arytenoid cartilage on opposite side") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (craniocervical muscle) AnnotationAssertion(Annotation( ) "Any muscle organ that is part of either the head or the neck.") AnnotationAssertion( ) AnnotationAssertion( "NCIT:C32716") AnnotationAssertion(Annotation( "ncithesaurus:Head_and_Neck_Muscle") "UMLS:C0448281") AnnotationAssertion( "muscle of head or neck") AnnotationAssertion( "uberon") AnnotationAssertion( "muscle of head and neck") AnnotationAssertion( "UBERON:0010959") AnnotationAssertion(rdfs:label "craniocervical muscle") SubClassOf( ) SubClassOf(Annotation( "prolog"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (erector spinae pre-muscle mass) AnnotationAssertion( "EHDAA2:0000455") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010961") AnnotationAssertion(rdfs:label "erector spinae pre-muscle mass") SubClassOf(Annotation( "EHDAA2"^^xsd:string) ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (extensor pre-muscle mass) AnnotationAssertion( "EHDAA2:0000459") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010962") AnnotationAssertion(rdfs:label "extensor pre-muscle mass") SubClassOf(Annotation( "EHDAA2"^^xsd:string) ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (trunk and cervical myotome group) AnnotationAssertion( "EHDAA2:0003425") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010963") AnnotationAssertion(rdfs:comment "isa row in EHDAA2") AnnotationAssertion(rdfs:label "trunk and cervical myotome group") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (intercostal pre-muscle mass) AnnotationAssertion( "EHDAA2:0000843") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010970") AnnotationAssertion(rdfs:label "intercostal pre-muscle mass") SubClassOf(Annotation( "EHDAA2"^^xsd:string) ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "cjm"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (external intercostal pre-muscle mass) AnnotationAssertion( "EHDAA2:0000467") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010974") AnnotationAssertion(rdfs:label "external intercostal pre-muscle mass") SubClassOf(Annotation( "EHDAA2"^^xsd:string) ) # Class: (external oblique pre-muscle mass) AnnotationAssertion( "EHDAA2:0000470") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010975") AnnotationAssertion(rdfs:label "external oblique pre-muscle mass") SubClassOf(Annotation( "EHDAA2"^^xsd:string) ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (flexor pre-muscle mass) AnnotationAssertion( "EHDAA2:0000543") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010977") AnnotationAssertion(rdfs:label "flexor pre-muscle mass") SubClassOf(Annotation( "EHDAA2"^^xsd:string) ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (internal intercostal pre-muscle mass) AnnotationAssertion( "EHDAA2:0000876") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010981") AnnotationAssertion(rdfs:label "internal intercostal pre-muscle mass") SubClassOf(Annotation( "EHDAA2"^^xsd:string) ) # Class: (latissimus dorsi pre-muscle mass) AnnotationAssertion( "EHDAA2:0000933") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010982") AnnotationAssertion(rdfs:label "latissimus dorsi pre-muscle mass") SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (levator scapulae pre-muscle mass) AnnotationAssertion( "EHDAA2:0000993") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010983") AnnotationAssertion(rdfs:label "levator scapulae pre-muscle mass") SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (pectoral pre-muscle mass) AnnotationAssertion( "EHDAA2:0001423") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010984") AnnotationAssertion(rdfs:label "pectoral pre-muscle mass") SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (rhomboid pre-muscle mass) AnnotationAssertion( "EHDAA2:0001636") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010985") AnnotationAssertion(rdfs:label "rhomboid pre-muscle mass") SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (serratus ventralis pre-muscle mass) AnnotationAssertion( "EHDAA2:0001833") AnnotationAssertion( "EHDAA:5992") AnnotationAssertion(Annotation( "EHDAA2:0001833") "serratus anterior pre-muscle mass") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010986") AnnotationAssertion(rdfs:label "serratus ventralis pre-muscle mass") SubClassOf(Annotation( "EHDAA2"^^xsd:string) ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (sterno-mastoid pre-muscle mass) AnnotationAssertion( "EHDAA2:0001913") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010987") AnnotationAssertion(rdfs:label "sterno-mastoid pre-muscle mass") SubClassOf(Annotation( "EHDAA2"^^xsd:string) ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (teres major pre-muscle mass) AnnotationAssertion( "EHDAA2:0002005") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010988") AnnotationAssertion(rdfs:label "teres major pre-muscle mass") SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (transverospinalis pre-muscle mass) AnnotationAssertion(Annotation( ) "A pre-muscle condensation that will develop into a transverospinalis muscle.") AnnotationAssertion( "EHDAA2:0002076") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010989") AnnotationAssertion(rdfs:label "transverospinalis pre-muscle mass") SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (transversospinales muscle) AnnotationAssertion(Annotation( ) "The transversospinal muscles are a group of muscles of the human back. Their combined action is rotation and extension of the vertebral column. They include: semispinalis, spanning 4-6 vertebral segments semispinalis dorsi semispinalis cervicis semispinalis capitis multifidus, spanning 2-4 vertebral segments rotatores, spanning 1-2 vertebral segments rotatores cervicis rotatores thoracis rotatores lumborum.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0002075") AnnotationAssertion( "EHDAA:9465") AnnotationAssertion( "FMA:71304") AnnotationAssertion(Annotation( "EHDAA2:0002075") "transverospinalis") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "deep dorsal muscles") AnnotationAssertion(Annotation( ) Annotation( "FMA:TA"^^xsd:string) Annotation( ) "musculi transversospinales") AnnotationAssertion(Annotation( ) "transversospinal group of muscles") AnnotationAssertion(Annotation( "FMA:71304") "transversospinales") AnnotationAssertion(Annotation( "FMA:71304") "transversospinales muscle group") AnnotationAssertion( "UBERON:0010990") AnnotationAssertion(rdfs:label "transversospinales muscle") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/7/7f/Gray384.png"^^xsd:anyURI) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (subscapularis pre-muscle mass) AnnotationAssertion( "EMAPA:17750") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010993") AnnotationAssertion(rdfs:label "subscapularis pre-muscle mass") SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (coronoid process of ulna) AnnotationAssertion(Annotation( ) "A triangular eminence projecting forward from the proximal epiphysis of the ulna[WP,modified].") AnnotationAssertion(Annotation( "FMA:23616") "coronoid process") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:23616") AnnotationAssertion(Annotation( ) "coronoid process of the ulna") AnnotationAssertion(Annotation( "FMA:23616") "processus coronoideus") AnnotationAssertion( "ulnar coronoid process") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "processus coronoideus ulnae") AnnotationAssertion( "UBERON:0010994") AnnotationAssertion(rdfs:label "coronoid process of ulna") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/6/60/Gray212.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (deep part of masseter muscle) AnnotationAssertion( ) AnnotationAssertion( "FMA:49003") AnnotationAssertion(Annotation( "FMA:49003") "deep layer of masseter") AnnotationAssertion(Annotation( "FMA:49003") "deep part of masseter") AnnotationAssertion( "masseter, deep") AnnotationAssertion(Annotation( "FEED:FEED"^^xsd:string) "masseter, profundus") AnnotationAssertion(Annotation( "FMA:49003") "pars profunda (musculus masseter)") AnnotationAssertion(Annotation( "FMA:49003") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "pars profunda musculus masseterica") AnnotationAssertion( "pars profunda of masseter muscle") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0010995") AnnotationAssertion(rdfs:label "deep part of masseter muscle") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (articular cartilage of joint) AnnotationAssertion(Annotation( "BTO:0001572") "A thin layer of cartilage, usually hyaline, on the articular surface of bones in synovial joints.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AEO:0000179") AnnotationAssertion( "BTO:0001572") AnnotationAssertion( "CALOHA:TS-0055") AnnotationAssertion( "EFO:0001902") AnnotationAssertion( "EMAPA:35149") AnnotationAssertion( "FMA:12264") AnnotationAssertion( "GAID:101") AnnotationAssertion( "MA:0000487") AnnotationAssertion( "MESH:A02.165.165") AnnotationAssertion( "NCIT:C32144") AnnotationAssertion(Annotation( "ncithesaurus:Articular_Cartilage") "UMLS:C0007303") AnnotationAssertion( "galen:ArticularCartilage") AnnotationAssertion(Annotation( "MA:0000487") "articular cartilage") AnnotationAssertion(Annotation( "FMA:12264") "cartilago articularis") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0001572") "hyaline cartilage") AnnotationAssertion(Annotation( "AEO:0000179") "joint-associated cartilage") AnnotationAssertion( "UBERON:0010996") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "articular cartilage of joint") SubClassOf(Annotation( "MA"^^xsd:string) ) SubClassOf(Annotation( "Wikipedia"^^xsd:string) ObjectSomeValuesFrom( )) DisjointClasses( ) # Class: (articular cartilage element) AnnotationAssertion(Annotation( "ZFA:0001644") "Cartilage of the lower jaw that give rise to a portion of the anguloarticular compound bone.") AnnotationAssertion(Annotation( "ZFA:0001644") Annotation( ) "articular cartilages") AnnotationAssertion( "TAO:0001670") AnnotationAssertion( "ZFA:0001644") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011002") AnnotationAssertion(rdfs:label "articular cartilage element") SubClassOf(Annotation( "ZFA"^^xsd:string) ) # Class: (pharyngeal arch cartilage) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A cartilage element that is part of a splanchnocranium.") AnnotationAssertion( "EFO:0003689") AnnotationAssertion( "TAO:0001460") AnnotationAssertion( "ZFA:0001460") AnnotationAssertion(Annotation( "ZFA:0001460") Annotation( ) "pharyngeal arch cartilages") AnnotationAssertion(Annotation( "ZFA:0001460") "splanchnocranium cartilage") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011004") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "pharyngeal arch cartilage") SubClassOf(Annotation( "ZFA"^^xsd:string) ) SubClassOf( ) SubClassOf(Annotation( "ZFA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (endocardium of auricle) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An endocardium that is part of a atrium auricular region.") AnnotationAssertion(Annotation( "EHDAA2"^^xsd:string) "EHDAA2 this is an epithelium that is part of the endocardium") AnnotationAssertion( "FMA:13234") AnnotationAssertion(Annotation( "FMA:13234") "auricle endocardium") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011005") AnnotationAssertion(rdfs:label "endocardium of auricle") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (endocardium of left auricle) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An endocardium that is part of a left atrium auricular region.") AnnotationAssertion( "EHDAA2:0000277") AnnotationAssertion( "FMA:13236") AnnotationAssertion( "VHOG:0001231") AnnotationAssertion(Annotation( "EHDAA2:0000277") "left atrium auricular region endocardium") AnnotationAssertion(Annotation( "FMA:13236") "left auricle endocardium") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "VHOG:0001231") "left auricle endocardial tissue") AnnotationAssertion( "UBERON:0011006") AnnotationAssertion(rdfs:label "endocardium of left auricle") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (endocardium of right auricle) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An endocardium that is part of a right atrium auricular region.") AnnotationAssertion( "EHDAA2:0000292") AnnotationAssertion( "FMA:13235") AnnotationAssertion(Annotation( "FMA:13235") "right auricle endocardium") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011007") AnnotationAssertion(rdfs:label "endocardium of right auricle") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (brachioradialis) AnnotationAssertion(Annotation( ) "Brachioradialis is a muscle of the forearm that acts to flex the forearm at the elbow. It is also capable of both pronation and supination, depending on the position of the forearm. It is attached to the distal styloid process of the radius by way of the brachioradialis tendon, and to the lateral supracondylar ridge of the humerus.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:38485") AnnotationAssertion(Annotation( ) "brachioradialis muscle") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "musculus brachioradialis") AnnotationAssertion( "UBERON:0011011") AnnotationAssertion(rdfs:label "brachioradialis") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/9/92/Brachioradialis.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "Lateral supracondylar ridge of the humerus") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "Distal radius") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (flexor pollicis brevis muscle) AnnotationAssertion(Annotation( ) "The flexor pollicis brevis is a muscle in the hand that flexes the thumb. It is one of three thenar muscles. It has both a superficial part and a deep part.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:37378") AnnotationAssertion(Annotation( "FMA:37378") "flexor pollicis brevis") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "musculus flexor pollicis brevis") AnnotationAssertion( "UBERON:0011012") AnnotationAssertion(rdfs:label "flexor pollicis brevis muscle") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/c/ca/Musculusflexorpollicisbrevis.png"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "Extensor pollicis longus and brevis") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (spinalis muscle) AnnotationAssertion(Annotation( ) "The spinalis is the portion of the erector spinae, a bundle of muscles and tendons, located nearest to the spine. It is divided into three parts. [WP,unvetted].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0002621") AnnotationAssertion( "FMA:77179") AnnotationAssertion(Annotation( "BTO:0002621") "spinal muscle") AnnotationAssertion(Annotation( "FMA:77179") "spinalis") AnnotationAssertion( "uberon") AnnotationAssertion( "medial column of erector spinae") AnnotationAssertion(Annotation( ) "musculus spinalis") AnnotationAssertion(Annotation( ) Annotation( ) "musculus spinalis") AnnotationAssertion(Annotation( ) "spinalis muscle") AnnotationAssertion( "UBERON:0011013") AnnotationAssertion(rdfs:label "spinalis muscle") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/a/a4/Spinalis.png"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf(Annotation( "BTO"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "spinous process Thoracis: Upper lumbar and lower thoracic vertebrae. Cervicis: Ligamentum nuchae and spinous process of C7.") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "spinous process Thoracis: Upper lumbar and lower thoracic vertebrae. Cervicis: Ligamentum nuchae and spinous process of C7.") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "spinous process Thoracis: SP of upper thoracic vertebrae. Cervicis: SP of cervical vertebrae except C1.") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "spinous process Thoracis: SP of upper thoracic vertebrae. Cervicis: SP of cervical vertebrae except C1.") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (spinalis capitis muscle) AnnotationAssertion(Annotation( "BTO:0002622") "Origin: spines of upper thoracic and lower cervical vertebrae; insertion: occipital bone; innervation: spinal nerves; action, extends head.") AnnotationAssertion( ) AnnotationAssertion( "BTO:0002622") AnnotationAssertion( "FMA:22775") AnnotationAssertion(Annotation( "BTO:0002622") "spinal muscle of head") AnnotationAssertion(Annotation( "FMA:22775") "spinalis capitis") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0002622") "musculus spinalis capitis") AnnotationAssertion( "UBERON:0011014") AnnotationAssertion(rdfs:label "spinalis capitis muscle") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (iliac fossa) AnnotationAssertion( ) AnnotationAssertion( "FMA:75316") AnnotationAssertion( "NCIT:C103454") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011015") AnnotationAssertion(rdfs:label "iliac fossa") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pyramidalis) AnnotationAssertion(Annotation( ) "The pyramidalis is a small and triangular muscle, anterior to the Rectus abdominis, and contained in the rectus sheath.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:15568") AnnotationAssertion( "NCIT:C33438") AnnotationAssertion(Annotation( "ncithesaurus:Pyramidalis") "UMLS:C0224374") AnnotationAssertion(Annotation( "FMA:15568") "pyramidalis muscle") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "musculus pyramidalis") AnnotationAssertion(Annotation( ) "pyramidalis") AnnotationAssertion( "UBERON:0011016") AnnotationAssertion(rdfs:label "pyramidalis") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/9/91/Gray397.png"^^xsd:anyURI) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf(Annotation( "pubic symphysis and pubic crest") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (semispinalis muscle) AnnotationAssertion(Annotation( ) "A transversospinalis muscle of the human body.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:22823") AnnotationAssertion(Annotation( ) "semispinalis") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011017") AnnotationAssertion(rdfs:label "semispinalis muscle") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (flexor hallucis brevis muscle) AnnotationAssertion(Annotation( ) "A muscle that originates from the cuboid bone and divides into two portions, which are inserted into the medial and lateral sides of the base of the first phalanx of the great toe, a sesamoid bone being present in each tendon at its insertion.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:36259") AnnotationAssertion( "FMA:37449") AnnotationAssertion(Annotation( "FMA:37449") "flexor hallucis brevis") AnnotationAssertion(Annotation( ) "flexor hallucis brevis muscle") AnnotationAssertion(Annotation( "FMA:37449") "m.flexor hallucis brevis") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "EMAPA:36259") "flexor digit I brevis") AnnotationAssertion(Annotation( ) Annotation( ) "musculus flexor hallucis brevis") AnnotationAssertion( "UBERON:0011022") AnnotationAssertion(rdfs:label "flexor hallucis brevis muscle") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/5/58/Musculus_flexor_hallucis_brevis.png"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf(Annotation( "plantar surface of cuneiform bones") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "medial and lateral sesamoid bones of first metatarsal") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "medial and lateral sesamoid bones of first metatarsal") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (extrinsic extensor muscle of manus) AnnotationAssertion(Annotation( ) "The extrinsic extensor muscles of the hand are located in the back of the forearm and have long tendons connecting them to bones in the hand, where they exert their action.") AnnotationAssertion( ) AnnotationAssertion(Annotation( ) "extrinsic extensor muscle of hand") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011024") AnnotationAssertion(rdfs:label "extrinsic extensor muscle of manus") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (aryepiglotticus muscle) AnnotationAssertion(Annotation( ) "The aryepiglotticus is a muscle of the larynx running in the aryepiglottic fold from the arytenoid cartilage to the epiglottis.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:46602") AnnotationAssertion( "NCIT:C32146") AnnotationAssertion(Annotation( "ncithesaurus:Aryepiglottic_Muscle") "UMLS:C0224177") AnnotationAssertion(Annotation( "FMA:46602") "ary-epiglottic part of oblique arytenoid") AnnotationAssertion( "aryepiglottic") AnnotationAssertion(Annotation( "FMA:46602") "aryepiglottic muscle") AnnotationAssertion(Annotation( ) "aryepiglotticus") AnnotationAssertion(Annotation( "FEED:FEED"^^xsd:string) "aryepiglottus") AnnotationAssertion(Annotation( "FEED:FEED"^^xsd:string) "aryepiglottus muscle") AnnotationAssertion(Annotation( "FMA:46602") "pars aryepiglottica (musculus arytenoideus obliquus)") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) Annotation( ) "pars aryepiglottica musculus arytenoidei obliqui") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "musculus aryepiglotticus") AnnotationAssertion(Annotation( ) Annotation( ) "pars aryepiglottica musculi arytenoidei obliqui") AnnotationAssertion( "UBERON:0011025") AnnotationAssertion(rdfs:label "aryepiglotticus muscle") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/5/52/Musculusarytenoideus.png"^^xsd:anyURI) SubClassOf(Annotation( "ncithesaurus"^^xsd:string) ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obturator muscle) AnnotationAssertion(Annotation( ) "One of: obturator externus or obturator internus.") AnnotationAssertion( "obturator") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:36235") AnnotationAssertion( "FMA:19083") AnnotationAssertion( "NCIT:C33193") AnnotationAssertion(Annotation( "ncithesaurus:Obturator_Muscle") "UMLS:C0224421") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011043") AnnotationAssertion(rdfs:label "obturator muscle") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (obturator internus) AnnotationAssertion(Annotation( ) "The obturator internus muscle originates on the medial surface of the obturator membrane, the ischium near the membrane, and the rim of the pubis. It exits the pelvic cavity through the lesser sciatic foramen. The obturator internus is situated partly within the lesser pelvis, and partly at the back of the hip-joint. It functions to help laterally rotate extended thigh and abduct flexed thigh, as well as to steady the femoral head in the acetabulum.") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0010052") Annotation( "AAO"^^xsd:string) Annotation( "AAO:EJS"^^xsd:string) "Originates on the entire lateral surface of the pelvic rim. Dorsal fibers insert distally to the dorso-medial surface of the caput femoris and ventral fibers extend around the acetabulum to insert on the tendon of the caput femoris.[AAO]") AnnotationAssertion(Annotation( "AAO"^^xsd:string) "Definition generalized to accommodate AAO class - 'Originates on the entire lateral surface of the pelvic rim. Dorsal fibers insert distally to the dorso-medial surface of the caput femoris and ventral fibers extend around the acetabulum to insert on the tendon of the caput femoris.' [AAO:0010052]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010052") AnnotationAssertion( "EMAPA:36237") AnnotationAssertion( "FMA:22298") AnnotationAssertion( "NCIT:C33192") AnnotationAssertion(Annotation( "ncithesaurus:Obturator_Internus_Muscle") "UMLS:C1518529") AnnotationAssertion(Annotation( "FMA:22298") "internal obturator") AnnotationAssertion(Annotation( "FMA:22298") "musculus obturator internus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "internus obturator") AnnotationAssertion(Annotation( ) Annotation( ) "musculus obturatorius internus") AnnotationAssertion(Annotation( ) "obturator internus muscle") AnnotationAssertion(Annotation( ) "obturatorius internus") AnnotationAssertion( "UBERON:0011048") AnnotationAssertion(rdfs:label "obturator internus") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/5/55/Posterior_Hip_Muscles_1.PNG"^^xsd:anyURI) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "medial aspect of the Greater trochanter") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (uterovesical pouch) AnnotationAssertion(Annotation( ) "The peritoneum over the rectum and the bladder is continued over the intestinal surface and fundus of the uterus on to its vesical surface, which it covers as far as the junction of the body and cervix uteri, and then to the bladder, forming here a second, but shallower, pouch, the vesicouterine excavation (or uterovesical pouch). The vesicouterine excavation is close to the anterior fornix of the vagina.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:14729") AnnotationAssertion( "NCIT:C33843") AnnotationAssertion(Annotation( "ncithesaurus:Utero-Vesical_Pouch") "UMLS:C1519874") AnnotationAssertion(Annotation( "FMA:14729") "excavatio vesico-uterina") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) Annotation( ) "excavatio vesicouterina") AnnotationAssertion(Annotation( "FMA:14729") "vesico-uterine pouch") AnnotationAssertion(Annotation( "FMA:14729") "vesicouterine pouch") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "excavatio vesicouterina") AnnotationAssertion(Annotation( ) "excavatio vesiocuterina") AnnotationAssertion(Annotation( ) "vesicouterine") AnnotationAssertion(Annotation( ) "vesicouterine excavation") AnnotationAssertion(Annotation( ) "vesicouterine pouch") AnnotationAssertion( "UBERON:0011049") AnnotationAssertion(rdfs:label "uterovesical pouch") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/5/51/WeiblichesBeckenMedian.gif"^^xsd:anyURI) SubClassOf( ) # Class: (thoracic vertebra 8) AnnotationAssertion(Annotation( ) Annotation( "ncithesaurus:T8_Vertebra") "The eighth thoracic vertebra counting from the top down. Note that members of this class are not necessarily homologous[ncit,modified].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:19549") AnnotationAssertion( "FMA:9991") AnnotationAssertion( "MA:0001445") AnnotationAssertion( "NCIT:C33730") AnnotationAssertion(Annotation( "ncithesaurus:T8_Vertebra") "UMLS:C0459953") AnnotationAssertion(Annotation( "FMA:9991") "T8 vertebra") AnnotationAssertion(Annotation( "FMA:9991") "eighth dorsal vertebra") AnnotationAssertion(Annotation( "FMA:9991") "eighth thoracic vertebra") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011050") AnnotationAssertion(rdfs:label "thoracic vertebra 8") SubClassOf(Annotation( "MA"^^xsd:string) ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (perilymphatic channel) AnnotationAssertion(Annotation( ) Annotation( "MESH:A09.246.631.246.280") "A channel containing perilymph passing through the temporal bone, connecting the scala tympani of the cochlea to the subarachnoid space.") AnnotationAssertion( "relationship to FMA class unclear") AnnotationAssertion(Annotation( "ZFA:0005461, ZFIN:curator") "Duct that contains perilymph[ZFA:0005461, ZFIN:curator].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0000136") AnnotationAssertion( "EMAPA:35677") AnnotationAssertion( "FMA:77822") AnnotationAssertion( "MA:0000248") AnnotationAssertion( "ZFA:0005461") AnnotationAssertion(Annotation( "AAO:0000136") "ductus perilymphaticus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:77822") Annotation( "MESH:A09.246.631.246.280") "cochlear aqueduct") AnnotationAssertion(Annotation( "MESH:A09.246.631.246.280") "perilymphatic duct") AnnotationAssertion(Annotation( "MA:0000248") "perilymphatic space") AnnotationAssertion( "UBERON:0011060") AnnotationAssertion(rdfs:label "perilymphatic channel") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "MA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (endolymphatic space) AnnotationAssertion(Annotation( ) "Endolymph-filled space contained by the membranous labyrinth.") AnnotationAssertion( "endolymphatic") AnnotationAssertion( ) AnnotationAssertion( "FMA:77823") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011078") AnnotationAssertion(rdfs:label "endolymphatic space") SubClassOf( ) SubClassOf(Annotation( "Wikipedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (angular bone) AnnotationAssertion(Annotation( ) Annotation( "TAO:0001669") "Dermal bone that is located posterior to the dentary and lateral to the articular and retroarticular bones of the lower jaw. The angular forms the outer dermal sheet of the posterior part of the lower jaw. The angular bears a portion of the mandibular sensory canal. The angular is a paired bone.") AnnotationAssertion( "The angular fuses with the articular bone in clupeocephalans forming the anguloarticular.") AnnotationAssertion(Annotation( "AAO:0000010") "angular") AnnotationAssertion( ) AnnotationAssertion( "AAO:0000010") AnnotationAssertion( "TAO:0001669") AnnotationAssertion( "ZFA:0001645") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "ZFA:0001645") Annotation( ) "angular bones") AnnotationAssertion(Annotation( "AAO:0000010") "postoperculare") AnnotationAssertion(Annotation( "AAO:0000010") "praearticulare") AnnotationAssertion( "UBERON:0011079") AnnotationAssertion(rdfs:label "angular bone") SubClassOf( ) SubClassOf(Annotation( "TAO"^^xsd:string) ) SubClassOf( ) SubClassOf(Annotation( "mandibular series") Annotation( "ISBN:0073040584"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "AAO"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (palatoquadrate arch) AnnotationAssertion(Annotation( ) Annotation( "VHOG:0000511") "The dorsal portion of the first pharyngeal arch, comprising the upper jaw[ZFIN,VHOG].") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000511") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "DOI:10.1046/j.1469-7580.2001.19910133.x Graham A. The development and evolution of the pharyngeal arches. J Anat (2001)"^^xsd:string) "Subsequent vertebrate evolution has also involved major alterations to the pharynx; perhaps the most notable occurred with the evolution of the gnathostomes. This involved substantial modifications to the most anterior pharyngeal segments, with the jaw forming from the first, anterior, pharyngeal segment, while the second formed its supporting apparatus, the hyoid.[well established][VHOG]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EFO:0003659") AnnotationAssertion( "TAO:0001272") AnnotationAssertion( "VHOG:0000511") AnnotationAssertion( "ZFA:0001272") AnnotationAssertion(Annotation( "ZFA:0001272") "dorsal visceral arch 1") AnnotationAssertion(Annotation( "ZFA:0001272") "upper pharyngeal jaw") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "VHOG:0000511") "dorsal mandibular arch") AnnotationAssertion(Annotation( "VHOG:0000511") "dorsal pharyngeal arch 1") AnnotationAssertion(Annotation( "VHOG:0000511") "dorsal visceral arch 1") AnnotationAssertion(Annotation( "VHOG:0000511") "palatoquadrate arch") AnnotationAssertion(Annotation( "VHOG:0000511") "upper jaw") AnnotationAssertion(Annotation( "VHOG:0000511") "upper pharyngeal jaw") AnnotationAssertion( "UBERON:0011085") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "palatoquadrate arch") SubClassOf( ) SubClassOf(Annotation( "cjm"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "VHOG"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pharyngeal arch 7) AnnotationAssertion( "7"^^xsd:nonNegativeInteger) AnnotationAssertion( "TAO:0001602") AnnotationAssertion( "ZFA:0001610") AnnotationAssertion(Annotation( "ZFA:0001610") "gill arch 5") AnnotationAssertion(Annotation( "ZFA:0001610") "visceral arch 7") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "ZFA:0001610") "branchial arch 5") AnnotationAssertion( "UBERON:0011087") AnnotationAssertion(rdfs:label "pharyngeal arch 7") SubClassOf(Annotation( "ZFA"^^xsd:string) ) # Class: (ligament of knee joint) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A ligament that is part of a knee joint.") AnnotationAssertion( ) AnnotationAssertion( "FMA:44580") AnnotationAssertion(Annotation( "FMA:44580") "knee joint ligament") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011088") AnnotationAssertion(rdfs:label "ligament of knee joint") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (skeleton of right pelvic girdle) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A skeleton of pelvic girdle that is part of a right pelvic girdle region.") AnnotationAssertion( "FMA:87593") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011090") AnnotationAssertion(rdfs:label "skeleton of right pelvic girdle") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (skeleton of left pelvic girdle) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A skeleton of pelvic girdle that is part of a left pelvic girdle region.") AnnotationAssertion( "FMA:87594") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011091") AnnotationAssertion(rdfs:label "skeleton of left pelvic girdle") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (right pelvic girdle region) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A pelvic girdle region that is in the right side of a multicellular organism.") AnnotationAssertion( "https://github.com/obophenotype/uberon/wiki/Modeling-paired-structures-Design-Pattern"^^xsd:anyURI) AnnotationAssertion( "FMA:16582") AnnotationAssertion(Annotation( "FMA:16582") Annotation( ) "right pelvic girdle") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011092") AnnotationAssertion(rdfs:label "right pelvic girdle region") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (left pelvic girdle region) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A pelvic girdle region that is in the left side of a multicellular organism.") AnnotationAssertion( "https://github.com/obophenotype/uberon/wiki/Modeling-paired-structures-Design-Pattern"^^xsd:anyURI) AnnotationAssertion( "FMA:16583") AnnotationAssertion(Annotation( "FMA:16583") Annotation( ) "left pelvic girdle") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011093") AnnotationAssertion(rdfs:label "left pelvic girdle region") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (vertebra cartilage element) AnnotationAssertion(Annotation( ) Annotation( ) Annotation( "GO_REF:0000034"^^xsd:string) Annotation( "VSAO:0000184") "The cartilaginous form of a vertebral element, a skeletal element that forms around the notochord and is part of the vertebral column.") AnnotationAssertion(Annotation( "vertebra-like cartilage in hagfish are homologous to gnathostome vertebrae. mesenchymal cells express Pax1/9 and Twist") Annotation( "PMC3157150") ) AnnotationAssertion(Annotation( "EHDAA2"^^xsd:string) "This class is a superclass of individual vertebral cartilage condensations. Note that EHDAA2 represents these as condensation groups") AnnotationAssertion( "EMAPA:32669") AnnotationAssertion( "VHOG:0000584") AnnotationAssertion(Annotation( "VHOG:0000584") "vertebral cartilage condensation") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011094") AnnotationAssertion(rdfs:label "vertebra cartilage element") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (vertebra pre-cartilage condensation) AnnotationAssertion(Annotation( ) Annotation( ) Annotation( "GO_REF:0000034"^^xsd:string) Annotation( "VSAO:0000184") "The pre-cartilaginous form of a vertebral element, a skeletal element that forms around the notochord and is part of the vertebral column.") AnnotationAssertion( "EMAPA:32671") AnnotationAssertion( "VHOG:0000582") AnnotationAssertion(Annotation( "VHOG:0000582") "vertebral pre-cartilage condensation") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011095") AnnotationAssertion(rdfs:label "vertebra pre-cartilage condensation") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lacrimal nerve) AnnotationAssertion(Annotation( ) "The lacrimal nerve is the smallest of the three branches of the ophthalmic division of the trigeminal nerve.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:52628") AnnotationAssertion( "NCIT:C32908") AnnotationAssertion(Annotation( ) Annotation( ) "nervus lacrimalis") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011096") AnnotationAssertion(rdfs:label "lacrimal nerve") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (epiphysis of fifth metacarpal bone) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An epiphysis that is part of a metacarpal bone of digit 5.") AnnotationAssertion( "FMA:86330") AnnotationAssertion(Annotation( "FMA:86330") "fifth metacarpal bone epiphysis") AnnotationAssertion( "metacarpal 5 epiphysis") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011104") AnnotationAssertion(rdfs:label "epiphysis of fifth metacarpal bone") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (cruciate ligament of atlas) AnnotationAssertion(Annotation( ) "A cruciate ligament in the neck forming part of the atlanto-axial joint. It consists of the transverse ligament of the atlas, along with additional fibers above and below.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:19010") AnnotationAssertion( "FMA:25018") AnnotationAssertion(Annotation( ) "cruciate ligament of dens") AnnotationAssertion(Annotation( "FMA:25018") "cruciform ligament of atlas") AnnotationAssertion(Annotation( ) "cruciform ligament of dens") AnnotationAssertion(Annotation( ) Annotation( ) "ligamentum cruciforme atlantis") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "EMAPA:19010") "triradiate ligament") AnnotationAssertion( "UBERON:0011106") AnnotationAssertion(rdfs:label "cruciate ligament of atlas") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "Wikipedia") Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (synovial joint of pelvic girdle) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A synovial joint that is part of a pelvic girdle region.") AnnotationAssertion( ) AnnotationAssertion( "FMA:35173") AnnotationAssertion( "NCIT:C32890") AnnotationAssertion(Annotation( "ncithesaurus:Joint_of_the_Pelvic_Girdle") "UMLS:C0827002") AnnotationAssertion( "joint of pelvic girdle") AnnotationAssertion(Annotation( "FMA:35173") "pelvic girdle joint") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011107") AnnotationAssertion(rdfs:label "synovial joint of pelvic girdle") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (synovial joint of pectoral girdle) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A synovial joint that is part of a pectoral girdle region.") AnnotationAssertion(Annotation( "FMA"^^xsd:string) "in FMA, these are part of the bony pectoral girdle") AnnotationAssertion( ) AnnotationAssertion( "FMA:35243") AnnotationAssertion( "joint of shoulder girdle") AnnotationAssertion(Annotation( "FMA:35243") "pectoral girdle joint") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011108") AnnotationAssertion(rdfs:label "synovial joint of pectoral girdle") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (humeroulnar joint) AnnotationAssertion(Annotation( ) "The humeroulnar joint, is part of the elbow-joint or the Olecron Joint, between the ulna and humerus bones is the simple hinge-joint, which allows for movements of flexion, extension and circumduction. The Humero-Ulnar Joint is the junction of trochlear notch of the ulna and the trochlea of the humerus. Owing to the obliquity of the trochlea of the humerus, this movement does not take place in the antero-posterior plane of the body of the humerus. When the forearm is extended and supinated, the axis of the arm and forearm are not in the same line; the arm forms an obtuse angle with the forearm. During flexion, however, the forearm and the hand tend to approach the middle line of the body, and thus enable the hand to be easily carried to the face. The accurate adaptation of the trochlea of the humerus, with its prominences and depressions, to the semilunar notch of the ulna, prevents any lateral movement. Flexion is produced by the action of the Biceps brachii and Brachialis, assisted by the Brachioradialis, with a tiny contribution from the muscles arising from the medial epicondyle of the humerus. Extension is produced by the Triceps brachii and AnconC&us, with a tiny contribution from the muscles arising from the lateral epicondyle of the humerus, such as the Extensor digitorum communis.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:38854") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) Annotation( ) "articulatio humeroulnaris") AnnotationAssertion(Annotation( "FMA:38854") "humero-ulnar joint") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011110") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "humeroulnar joint") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/9/97/Gray329.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (humeroradial joint) AnnotationAssertion(Annotation( ) Annotation( ) "A hinge joint between the head of the radius and the capitulum of the humerus.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:38855") AnnotationAssertion(Annotation( ) Annotation( ) "articulatio humeroradialis") AnnotationAssertion( "humero-radial joint") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011111") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "humeroradial joint") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/9/97/Gray329.png"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (tibiofibular joint) AnnotationAssertion(Annotation( ) Annotation( ) "A joint that connects the tibia and the fibula.") AnnotationAssertion( "we include location as part of the logical definition to prevent accidental classification of ankle joints as tibiofibular joints") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:35181") AnnotationAssertion( "fibulatibial joint") AnnotationAssertion( "fibulotibial joint") AnnotationAssertion( "tibiafibular joint") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011112") AnnotationAssertion(rdfs:label "tibiofibular joint") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (inferior tibiofibular joint) AnnotationAssertion(Annotation( ) "The inferior tibiofibular articulation (tibiofibular syndesmosis) is formed by the rough, convex surface of the medial side of the lower end of the fibula, and a rough concave surface on the lateral side of the tibia. Below, to the extent of about 4 mm. these surfaces are smooth, and covered with cartilage, which is continuous with that of the ankle-joint. The ligaments are: Anterior ligament of the lateral malleolus, Posterior ligament of the lateral malleolus, Inferior transverse ligament of the tibiofibular syndesmosis, Interosseous ligament.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:10465") AnnotationAssertion(Annotation( "FMA:10465") "distal tibiofibular joint") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) Annotation( ) "syndesmosis tibiofibularis") AnnotationAssertion(Annotation( "FMA:10465") "tibiofibular syndesmosis") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "inferior tibiofibular articulation") AnnotationAssertion( "UBERON:0011113") AnnotationAssertion(rdfs:label "inferior tibiofibular joint") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (superior tibiofibular joint) AnnotationAssertion(Annotation( ) "The superior tibiofibular articulation is an arthrodial joint between the lateral condyle of the tibia and the head of the fibula. The contiguous surfaces of the bones present flat, oval facets covered with cartilage and connected together by an articular capsule and by anterior and posterior ligaments. When the term 'tibiofibular articulation' is used without a modifier, it refers to the superior, and not the inferior tibiofibular articulation.") AnnotationAssertion(Annotation( ) "tibiofibular joint") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:35184") AnnotationAssertion(Annotation( "FMA:35184") "proximal tibiofibular joint") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "articulatio tibiofibularis") AnnotationAssertion(Annotation( ) "proximal tibiofibular joint") AnnotationAssertion(Annotation( "FMA:35184") "proximal tibiofibular syndesmosis") AnnotationAssertion(Annotation( ) "superior tibiofibular articulation") AnnotationAssertion( "UBERON:0011117") AnnotationAssertion(rdfs:label "superior tibiofibular joint") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/a/a8/Gray347.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (tarsometatarsal joint) AnnotationAssertion(Annotation( ) "The tarsometatarsal articulations are arthrodial joints in the pes.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:35216") AnnotationAssertion( "tarso-metatarsal join") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "Lisfranc joint") AnnotationAssertion(Annotation( ) Annotation( ) "articulationes tarsometatarsales") AnnotationAssertion(Annotation( ) "cuboideometatarsal") AnnotationAssertion(Annotation( ) "tarsometatarsal") AnnotationAssertion(Annotation( ) "tarsometatarsal articulation") AnnotationAssertion( "UBERON:0011118") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "tarsometatarsal joint") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/8/8e/Gray355.png"^^xsd:anyURI) AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/d/dc/Gray358.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (carpometacarpal joint) AnnotationAssertion(Annotation( ) "The carpometacarpal joints (CMC) are joints in the wrist that articulates the distal row of carpal bones and the proximal bases of the metacarpal bones.") AnnotationAssertion(Annotation( ) "CMJ") AnnotationAssertion(Annotation( ) "carpometacarpal") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:35287") AnnotationAssertion( "NCIT:C32265") AnnotationAssertion(Annotation( "ncithesaurus:Carpometacarpal_Joint") "UMLS:C0224620") AnnotationAssertion(Annotation( ) Annotation( ) "articulationes carpometacarpeæ") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "carpometacarpal articulation") AnnotationAssertion( "UBERON:0011119") AnnotationAssertion(rdfs:label "carpometacarpal joint") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/7/7c/Gray335.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (laryngeal joint) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A skeletal joint that connects a laryngeal cartilage.") AnnotationAssertion( "FMA:55100") AnnotationAssertion(Annotation( "FMA:55100") "joint of larynx") AnnotationAssertion(Annotation( "FMA:55100") "laryngeal articulation") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011120") AnnotationAssertion(rdfs:label "laryngeal joint") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (cricothyroid joint) AnnotationAssertion(Annotation( ) "The cricoarytenoid articulation (or joint) is a joint connecting the cricoid cartilage and the thyroid cartilage.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:55101") AnnotationAssertion( "NCIT:C32402") AnnotationAssertion(Annotation( "ncithesaurus:Cricothyroid_Joint") "UMLS:C0225540") AnnotationAssertion(Annotation( "FMA:55101") "cricothyroid articulation") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "crico-thyroid joint") AnnotationAssertion( "UBERON:0011121") AnnotationAssertion(rdfs:label "cricothyroid joint") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/8/8a/Larynx_external_en.svg"^^xsd:anyURI) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (cricoarytenoid joint) AnnotationAssertion(Annotation( ) "The cricoarytenoid articulation (or joint) is a joint connecting the cricoid cartilage and the arytenoid cartilage.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:55102") AnnotationAssertion( "NCIT:C32397") AnnotationAssertion(Annotation( "ncithesaurus:Cricoarytenoid_Joint") "UMLS:C0225555") AnnotationAssertion(Annotation( "FMA:55102") "crico-arytenoid joint") AnnotationAssertion(Annotation( "FMA:55102") "cricoarytenoid articulation") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "crico-arytenoid joint") AnnotationAssertion( "UBERON:0011122") AnnotationAssertion(rdfs:label "cricoarytenoid joint") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/d/dc/Gray960.png"^^xsd:anyURI) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (xiphisternal joint) AnnotationAssertion(Annotation( ) "The xiphisternal joint (or xiphisternal synchondrosis) is a location near the bottom of the sternum, where the body of the sternum and the xiphoid process.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:7503") AnnotationAssertion(Annotation( "FMA:7503") "synchondrosis xiphisternalis") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "xiphisternal junction") AnnotationAssertion(Annotation( ) "xiphisternal synchdrondosis") AnnotationAssertion( "UBERON:0011124") AnnotationAssertion(rdfs:label "xiphisternal joint") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/2/23/Gray116.png"^^xsd:anyURI) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (temporomandibular joint primordium) AnnotationAssertion( "EMAPA:18714") AnnotationAssertion(Annotation( "EMAPA:18714") "temporo-mandibular joint primordium") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011130") AnnotationAssertion(rdfs:label "temporomandibular joint primordium") SubClassOf( ) SubClassOf(Annotation( "EMAPA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (intermetacarpal joint) AnnotationAssertion(Annotation( "FMA:35288") "A skeletal joint that connects two adjacent metacarpals[FMA,modified].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:35288") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "intermetacarpal") AnnotationAssertion(Annotation( ) "intermetacarpal articulation") AnnotationAssertion( "UBERON:0011131") AnnotationAssertion(rdfs:label "intermetacarpal joint") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "two adjacent metacarpals") ObjectSomeValuesFrom( )) # Class: (intercarpal joint) AnnotationAssertion(Annotation( ) "A skeletal joint that connects two carpal bones.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:35292") AnnotationAssertion( "NCIT:C32264") AnnotationAssertion(Annotation( "ncithesaurus:Carpal_Joint") "UMLS:C1262468") AnnotationAssertion(Annotation( "FMA:35292") "carpal joint") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "intercarpal") AnnotationAssertion(Annotation( ) "intercarpal articulation") AnnotationAssertion(Annotation( ) "midcarpal articulation") AnnotationAssertion( "UBERON:0011132") AnnotationAssertion(rdfs:label "intercarpal joint") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/3/37/Gray336.png"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "two adjacent carpals") ObjectSomeValuesFrom( )) # Class: (intermetatarsal joint) AnnotationAssertion(Annotation( ) "A joint that connects two adjacent metatarsals.") AnnotationAssertion(Annotation( "WP"^^xsd:string) "In humans: The base of the first metatarsal is not connected with that of the second by any ligaments; in this respect the great toe resembles the thumb") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:35219") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011133") AnnotationAssertion(rdfs:label "intermetatarsal joint") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/d/dc/Gray358.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "two adjacent metatarsals") ObjectSomeValuesFrom( )) # Class: (nonsynovial joint) AnnotationAssertion(Annotation( "FMA:7491") "Joint in which the articulating bones or cartilages are connected by ligaments or fibrocartilage without an intervening synovial cavity. Examples: sagittal suture, inferior tibiofibular syndesmosis, costochondral joint, pubic symphysis.") AnnotationAssertion( "FMA:7491") AnnotationAssertion(Annotation( "FMA:7491") "solid joint") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011134") AnnotationAssertion(rdfs:label "nonsynovial joint") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (intervertebral cartilage) AnnotationAssertion(Annotation( "ISBN:0073040584"^^xsd:string) "A cartilage element that lies between two successive vertebral centra.") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0000795") Annotation( "AAO"^^xsd:string) Annotation( "AAO:Trueb_1973") "Block of cartilage, which usually ossifies, that lies between successive vertebral centra.[AAO]") AnnotationAssertion( "AAO:0000795") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011135") AnnotationAssertion(rdfs:label "intervertebral cartilage") SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) Annotation( "MA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "between two centra") ObjectSomeValuesFrom( )) # Class: (ligament of vertebral column) AnnotationAssertion(Annotation( "ISBN:0073040584"^^xsd:string) "Ligament that joins successive centra. Important in controlling the stiffness of the vertebral column when it flexes.") AnnotationAssertion( "intervertebral ligament") AnnotationAssertion( "vertebral centrum ligament") AnnotationAssertion( ) AnnotationAssertion( "FMA:31892") AnnotationAssertion(Annotation( "FMA:31892") "vertebral column ligament") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011136") AnnotationAssertion(rdfs:label "ligament of vertebral column") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (axial skeletal system) AnnotationAssertion(Annotation( ) "Subdivision of the skeletal system which consists of the axial skeleton plus associated joints.") AnnotationAssertion( "FMA:7483") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011137") AnnotationAssertion(rdfs:label "axial skeletal system") AnnotationAssertion(rdfs:seeAlso "http://purl.obolibrary.org/obo/uberon/docs/The-axial-skeleton"^^xsd:anyURI) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (postcranial axial skeletal system) AnnotationAssertion(Annotation( ) Annotation( ) "Subdivision of the skeletal system which consists of the postcranial axial skeleton plus associated joints.") AnnotationAssertion( ) AnnotationAssertion(Annotation( ) "axial skeletal system") AnnotationAssertion( "FMA:302077") AnnotationAssertion( "post-cranial axial skeletal system") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011138") AnnotationAssertion(rdfs:label "postcranial axial skeletal system") AnnotationAssertion(rdfs:seeAlso "http://purl.obolibrary.org/obo/uberon/docs/The-axial-skeleton"^^xsd:anyURI) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf(Annotation( "cjm"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (synovial limb joint) AnnotationAssertion(Annotation( ) "Any synovial joint that is part of a (free) limb.") AnnotationAssertion( "FMA:258776") AnnotationAssertion(Annotation( "FMA:258776") "synovial joint of free limb segment") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011139") AnnotationAssertion(rdfs:comment "Most limb joints are synovial, but a few such as the tibiofibular joints are syndesmoses.") AnnotationAssertion(rdfs:label "synovial limb joint") SubClassOf( ) SubClassOf( ) # Class: (superficial part of masseter muscle) AnnotationAssertion(Annotation( "2012-07-02"^^xsd:string) Annotation( "FEED"^^xsd:string) Annotation( "http://www.feedexp.org"^^xsd:string) "The superficial masseter is a separable part of the masseter muscle, is superficial to all other masseter muscle parts, and attaches to the mandibular angle.[FEED]") AnnotationAssertion( ) AnnotationAssertion( "FMA:49000") AnnotationAssertion(Annotation( "FEED:FEED"^^xsd:string) "masseter, superficial") AnnotationAssertion(Annotation( "FMA:49000") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "pars profunda musculus masseterica superficialis") AnnotationAssertion(Annotation( "FMA:49000") "pars superficialis (musculus masseter)") AnnotationAssertion( "pars superficialis of masseter muscle") AnnotationAssertion(Annotation( "FMA:49000") "superficial layer of masseter") AnnotationAssertion(Annotation( "FMA:49000") "superficial part of masseter") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011140") AnnotationAssertion(rdfs:label "superficial part of masseter muscle") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (appendicular ossicle) AnnotationAssertion(Annotation( "PSPUB:0000169") Annotation( "VSAO:0000131") "Ossicle that is part of the appendicular skeleton.") AnnotationAssertion( "VSAO:0000131") AnnotationAssertion( "XAO:0004194") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "ossicle of appendicular skeleton") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011141") AnnotationAssertion(rdfs:comment "Examples of appendicular ossicles include the patella and meniscus of the knee joint.") AnnotationAssertion(rdfs:label "appendicular ossicle") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (axial ossicle) AnnotationAssertion(Annotation( "PSPUB:0000169") Annotation( "VSAO:0000133") "Ossicle that is part of the axial skeleton.") AnnotationAssertion( "VSAO:0000133") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "ossicle of axial skeleton") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "ossicle of postcranial-axial skeleton") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "vertebral ossicle") AnnotationAssertion( "UBERON:0011142") AnnotationAssertion(rdfs:comment "Examples of axial ossicles include the ossified tendons adjacent to the neural spines of the vertebral column.") AnnotationAssertion(rdfs:label "axial ossicle") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (upper urinary tract) AnnotationAssertion(Annotation( "FMA:45658") "Subdivision of urinary system which consists of the kidney and the ureters.") AnnotationAssertion( ) AnnotationAssertion( "FMA:45658") AnnotationAssertion( "NCIT:C61107") AnnotationAssertion( "galen:UpperUrinaryTract") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011143") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "upper urinary tract") SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA-abduced-lr"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (adductor muscle of hip) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0000030") AnnotationAssertion( "EMAPA:19166") AnnotationAssertion( "MA:0002267") AnnotationAssertion(Annotation( "MA:0002267") "adductor group (leg)") AnnotationAssertion( "uberon") AnnotationAssertion( "muscle of adductor group") AnnotationAssertion( "UBERON:0011144") AnnotationAssertion(rdfs:label "adductor muscle of hip") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/e/e2/Anterior_Hip_Muscles_2.PNG"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "a small part of adductor magnus is innervated by the tibial nerve") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (adductor muscle) AnnotationAssertion(Annotation( ) Annotation( ) "A muscle capable of adduction. Adduction is a movement which brings a part of the anatomy closer to the middle sagittal plane of the body. It is opposed to abduction.") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0002136") Annotation( "TAO"^^xsd:string) Annotation( "ZFA:curator") "A muscle that brings a body part closer to the sagittal plane of the body.[TAO]") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0002136") Annotation( "TAO"^^xsd:string) "relationship loss: subclass cranial muscle (TAO:0001953)[TAO]") AnnotationAssertion(Annotation( "TAO") "we place the TAO class here even though it is a cranial muscle; it is defined functionally") AnnotationAssertion( ) AnnotationAssertion( "FMA:74998") AnnotationAssertion( "TAO:0002136") AnnotationAssertion( "ZFA:0005268") AnnotationAssertion( "uberon") AnnotationAssertion( "adductor") AnnotationAssertion( "UBERON:0011145") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "adductor muscle") SubClassOf( ) # Class: (submucosal gland) AnnotationAssertion(Annotation( ) Annotation( "BTO:0003751") "Gland of the lamina epithelialis mucosae which perforate the lamina muscularis, with their adenomeres located in the submucosal connective tissue.") AnnotationAssertion( ) AnnotationAssertion( "BTO:0003751") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37970") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011148") AnnotationAssertion(rdfs:label "submucosal gland") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "perforates") ObjectSomeValuesFrom( )) # Class: (jaw depressor muscle) AnnotationAssertion(Annotation( ) Annotation( ) "A muscle whose action is to depress the lower jaw.") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0000612") Annotation( "TAO"^^xsd:string) Annotation( "TAO:wd"^^xsd:string) "Muscle located on ventral side of the head, linking the ventral hyoid arch to the dentary. Innervated by ramus mandibularis V and ramus hyoides VII.[TAO]") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0010655") Annotation( "AAO"^^xsd:string) Annotation( "AAO:BMZ") "Muscle that pulls the hyoid apparatus forward and depresses the lower jaw.[AAO]") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0010655") Annotation( "AAO"^^xsd:string) "relationship loss: subclass hyobranchial muscles (AAO:0000224)[AAO]") AnnotationAssertion(Annotation( "2012-09-06"^^xsd:string) Annotation( "TAO:0000612") Annotation( "TAO"^^xsd:string) Annotation( "Curator"^^xsd:string) "Source: Winterbottom, R. 1973. A Descriptive Synonymy of the Striated Muscles of the Teleostei. Proceedings of the Academy of Natural Sciences of Philadelphia, Vol. 125 (1973), pp. 225-317.[TAO]") AnnotationAssertion(Annotation( ) "In amphibians, 'Muscle that pulls the hyoid apparatus forward and depresses the lower jaw.' [AAO:0010655]. 'The protractor hyoideus muscle in teleosts is commonly, albeit mistakenly, referred to as the geniohyoideus muscle, which is involved in the coracomandibularis coupling. According to Edgeworth (1935) and Winterbottom (1974), the protractor hyoideus is composed of a fusion of the intermandibularis posterior and the interhyoideus muscles which resulted in the protractor hyoideus which spans the hyoid and mandible. The intermandibularis spans the mandible while the closely apposed interhyoideus spans the hyoid in other fishes. Furthermore, they concluded that any muscle that is homologous to the geniohyoideus (coracomandibularis coupling) in other lower vertebrates has been lost in teleosts, as well as gars. However, the protractor hyoideus muscle is functionally analogous to the coracomandibularis coupling of other vertebrates and so we use it in our discussion to show the phylogenetically broad roles of these couplings in jaw mechanics.'") AnnotationAssertion( "AAO:0010655") AnnotationAssertion( "TAO:0000612") AnnotationAssertion( "XAO:0004127") AnnotationAssertion(Annotation( ) Annotation( ) "branchiomandibularis") AnnotationAssertion(Annotation( ) Annotation( ) "coracomandibularis") AnnotationAssertion(Annotation( ) Annotation( ) "depressor gnathalis") AnnotationAssertion(Annotation( ) Annotation( "TAO:0000612") Annotation( ) "geniohyoideus") AnnotationAssertion(Annotation( ) Annotation( ) "geniohyoideus muscle") AnnotationAssertion(Annotation( ) Annotation( ) "geniothoracis") AnnotationAssertion(Annotation( "TAO:0000612") Annotation( ) "protractor hyoidei") AnnotationAssertion(Annotation( ) Annotation( ) "protractor hyoideus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011151") AnnotationAssertion(rdfs:label "jaw depressor muscle") SubClassOf( ) # Class: (dorsal hyoid arch skeleton) AnnotationAssertion( "AAO:0010371") AnnotationAssertion( "TAO:0001401") AnnotationAssertion( "XAO:0003178") AnnotationAssertion( "ZFA:0001401") AnnotationAssertion(Annotation( "ZFA:0001401") "dorsal hyoid arch") AnnotationAssertion( "dorsal pharyngeal arch 2 skeleton") AnnotationAssertion(Annotation( "ZFA:0001401") "dorsal visceral arch 2") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011152") AnnotationAssertion(rdfs:label "dorsal hyoid arch skeleton") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "AAO"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (ventral hyoid arch skeleton) AnnotationAssertion( "AAO:0010372") AnnotationAssertion( "EFO:0003684") AnnotationAssertion( "TAO:0001402") AnnotationAssertion( "XAO:0003179") AnnotationAssertion( "ZFA:0001402") AnnotationAssertion(Annotation( "ZFA:0001402") "ventral hyoid arch") AnnotationAssertion( "ventral pharyngeal arch 2 skeleton") AnnotationAssertion(Annotation( "ZFA:0001402") "ventral visceral arch 2") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011153") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "ventral hyoid arch skeleton") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "AAO"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (gular region) AnnotationAssertion(Annotation( ) "Surface structure that extends from the chin covering pharynx and larynx.") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0002286") Annotation( "TAO"^^xsd:string) Annotation( "TAO:wd"^^xsd:string) "Surface structure that is the region between the chin and the isthmus. (from http://www.briancoad.com/Dictionary/introduction.htm).[TAO]") AnnotationAssertion( "TAO:0002286") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011154") AnnotationAssertion(rdfs:label "gular region") SubClassOf(Annotation( "TAO"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (Sylvian cistern) AnnotationAssertion(Annotation( ) "The subarachnoid space associated with the lateral cerebral sulcus (Sylvian fissure); contains the M1 segment of the middle cerebral artery and the origin of lenticulostriate arteries, and proximal parts of the middle cerebral artery.") AnnotationAssertion( ) AnnotationAssertion( "NCIT:C33714") AnnotationAssertion(Annotation( "ncithesaurus:Sylvian_Cistern") "UMLS:C1515104") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011155") AnnotationAssertion(rdfs:label "Sylvian cistern") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (facial skeleton) AnnotationAssertion(Annotation( ) Annotation( ) Annotation( ) Annotation( "MP:0005274") "Subdivision of skull that consists of the facial bones.") AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0002206") AnnotationAssertion( "EHDAA:8361") AnnotationAssertion( "EMAPA:18022") AnnotationAssertion( "FMA:53673") AnnotationAssertion( "MA:0000318") AnnotationAssertion(Annotation( "FMA:53673") "facial skeleton") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "MA:0000318") "facial bone") AnnotationAssertion(Annotation( ) Annotation( ) "ossa facialia") AnnotationAssertion(Annotation( ) Annotation( ) "ossa faciei") AnnotationAssertion(Annotation( "MA:0000318") Annotation( ) "viscerocranium") AnnotationAssertion( "UBERON:0011156") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "facial skeleton") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/7/77/Illu_facial_bones.jpg"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (cuneiform cartilage) AnnotationAssertion(Annotation( ) "The cuneiform cartilages of the larynx are two small, elongated pieces of yellow elastic cartilage, placed one on either side, in the aryepiglottic fold, where they give rise to small whitish elevations on the surface of the mucous membrane, just in front of the arytenoid cartilages.") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0000690") Annotation( "AAO"^^xsd:string) Annotation( "AAO:LAP"^^xsd:string) "Independent cartilage that may occur dorsal or anterior to the prominentiae apicales dorsales of the arytenoid cartilages.[AAO]") AnnotationAssertion(Annotation( "AAO"^^xsd:string) "compare with AAO def, 'Independent cartilage that may occur dorsal or anterior to the prominentiae apicales dorsales of the arytenoid cartilages.'") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0000690") AnnotationAssertion( "FMA:55111") AnnotationAssertion( "NCIT:C32417") AnnotationAssertion(Annotation( "AAO:0000690") "Wrisbergi cartilage") AnnotationAssertion(Annotation( "FMA:55111") "cartilage of Morgagni") AnnotationAssertion(Annotation( "FMA:55111") "cartilage of Wrisberg") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "cartilagines cuneiformes") AnnotationAssertion(Annotation( "AAO:0000690") "cartilago apicalis intermedia") AnnotationAssertion(Annotation( "AAO:0000690") "cartilago apicalis seu cartilago Santoriniana") AnnotationAssertion( "UBERON:0011157") AnnotationAssertion(rdfs:label "cuneiform cartilage") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/5/50/Gray956.png"^^xsd:anyURI) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf(Annotation( "Wikipedia"^^xsd:string) ) SubClassOf( ) # Class: (primary subdivision of skull) AnnotationAssertion(Annotation( ) "The skull can be divided into two: the neurocranium and the facial skeleton.") AnnotationAssertion( "FMA:54964") AnnotationAssertion(Annotation( "FMA:54964") "skull subdivision") AnnotationAssertion(Annotation( "FMA:54964") "subdivision of skull") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011158") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "primary subdivision of skull") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (primary subdivision of cranial skeletal system) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011159") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "primary subdivision of cranial skeletal system") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (nasal suture) AnnotationAssertion(Annotation( ) "A suture joining a nasal bone to another bone.") AnnotationAssertion( ) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011160") AnnotationAssertion(rdfs:label "nasal suture") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (spheno-occipital synchondrosis) AnnotationAssertion(Annotation( ) "The cartilaginous junction between the basisphenoid and basioccipital bones of the mammalian skull.") AnnotationAssertion( "in humans, usually closed by the age of 25") AnnotationAssertion( ) AnnotationAssertion( "FMA:54818") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011161") AnnotationAssertion(rdfs:label "spheno-occipital synchondrosis") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (supraoccipital cartilage element) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A cartilaginous condensation that has the potential to develop into a supraoccipital bone.") AnnotationAssertion( "EMAPA:18341") AnnotationAssertion( "supra-occipital cartilage condensation") AnnotationAssertion(Annotation( "EMAPA:18341") "supraoccipital cartilage condensation") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "EMAPA:18341") "non-squamous part of supraoccipital bone") AnnotationAssertion( "UBERON:0011162") AnnotationAssertion(rdfs:label "supraoccipital cartilage element") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (supraoccipital pre-cartilage condensation) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A pre-cartilage condensation that has the potential to develop into a supraoccipital bone.") AnnotationAssertion( "EHDAA2:0001963") AnnotationAssertion( "EHDAA:9534") AnnotationAssertion(Annotation( "EHDAA2:0001963") "supra-occipital pre-cartilage condensation") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011163") AnnotationAssertion(rdfs:label "supraoccipital pre-cartilage condensation") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "EHDAA2-inferred") ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (neurocranium bone) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A bone that is part of a neurocranium [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:35238") AnnotationAssertion( "MA:0001478") AnnotationAssertion(Annotation( "MA:0001478") "chondrocranium bone") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011164") AnnotationAssertion(rdfs:label "neurocranium bone") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (crico-esophageal tendon) AnnotationAssertion(Annotation( ) "Longitudinal fibers of the esophagus that attaches to the posterior aspect of the cricoid cartilage of the larynx.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:76887") AnnotationAssertion( "NCIT:C32399") AnnotationAssertion(Annotation( "ncithesaurus:Cricoesophageal_Tendon") "UMLS:C0227182") AnnotationAssertion( "crico-oesophageal tendon") AnnotationAssertion( "cricoesophageal tendon") AnnotationAssertion(Annotation( ) "tendo cricoesophageus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "Gillette suspensory ligament") AnnotationAssertion(Annotation( ) "suspensory ligament of esophagus") AnnotationAssertion( "UBERON:0011165") AnnotationAssertion(rdfs:label "crico-esophageal tendon") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (patellofemoral joint) AnnotationAssertion( ) AnnotationAssertion( "FMA:43574") AnnotationAssertion( "galen:PatelloFemoralJoint") AnnotationAssertion( "femorapatellar joint") AnnotationAssertion( "femoropatellar joint") AnnotationAssertion(Annotation( "galen:PatelloFemoralJoint") "patello femoral joint") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011166") AnnotationAssertion(rdfs:label "patellofemoral joint") SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (septomaxilla bone) AnnotationAssertion(Annotation( ) Annotation( "AAO:0000556") "Paired, intramembranous bones located within the nasal capsules and embedded in the nasal cartilages; it is pierced by the ductus nasolacrimalis.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0000556") AnnotationAssertion(Annotation( "AAO:0000556") "septomaxilla") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "AAO:0000556") "internasale") AnnotationAssertion(Annotation( "AAO:0000556") "intranasal") AnnotationAssertion(Annotation( "AAO:0000556") "lacrimale") AnnotationAssertion(Annotation( "AAO:0000556") "le cornet") AnnotationAssertion(Annotation( "AAO:0000556") "nariale") AnnotationAssertion(Annotation( "AAO:0000556") "nasale") AnnotationAssertion(Annotation( "AAO:0000556") "os internasale") AnnotationAssertion(Annotation( "AAO:0000556") "os nariale") AnnotationAssertion(Annotation( "AAO:0000556") "septomaxillary") AnnotationAssertion(Annotation( "AAO:0000556") "turbinale") AnnotationAssertion( "UBERON:0011167") AnnotationAssertion(rdfs:comment "A small dermal bone of the facial series that is often absent; when present it is usually sunken beneath the surface bones and aids in forming the nasal cavity") AnnotationAssertion(rdfs:label "septomaxilla bone") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "AAO"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (postfrontal bone) AnnotationAssertion(Annotation( ) "A bone behind and above the orbit of which it commonly forms part of the border that is present in many vertebrates and corresponds to the postorbital process of the frontal bone of various birds and mammals.") AnnotationAssertion(Annotation( "Wikipedia"^^xsd:string) ) AnnotationAssertion( "postfrontal") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011168") AnnotationAssertion(rdfs:label "postfrontal bone") SubClassOf( ) SubClassOf(Annotation( "ISBN:0073040584"^^xsd:string) ) SubClassOf(Annotation( "orbital series"^^xsd:string) Annotation( "ISBN:0073040584"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "ISBN:0073040584"^^xsd:string) ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) # Class: (postorbital bone) AnnotationAssertion(Annotation( ) "The postorbital is one of the bones in vertebrate skulls which forms a portion of the dermal skull roof and, sometimes, a ring about the orbit. Generally, it is located behind the postfrontal and posteriorly to the orbital fenestra. In some vertebrates, the postorbital is fused with the postfrontal to create a postorbitofrontal.") AnnotationAssertion( "postorbital") AnnotationAssertion( ) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011169") AnnotationAssertion(rdfs:label "postorbital bone") SubClassOf( ) SubClassOf(Annotation( "ISBN:0073040584"^^xsd:string) ) SubClassOf(Annotation( "orbital series"^^xsd:string) Annotation( "ISBN:0073040584"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "ISBN:0073040584"^^xsd:string) ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) # Class: (joint connecting upper and lower jaws) AnnotationAssertion(Annotation( ) Annotation( ) "Synovial joint that articulates bones of upper and lower jaw.") AnnotationAssertion(Annotation( ) "Some synapsids retained two pairs of jaw joints - quadrate-articular and tempero-mandibular, but this unusual paired condition did not last long") AnnotationAssertion( "jaw joint") AnnotationAssertion( "NCIT:C32888") AnnotationAssertion( "craniomandibular joint") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011171") AnnotationAssertion(rdfs:label "joint connecting upper and lower jaws") SubClassOf(Annotation( "abduced") ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (retrorubral area of midbrain reticular nucleus) AnnotationAssertion(Annotation( "NLXANAT:20090301") "The term retrorubral area of the midbrain reticular nucleus refers to a region of the rat brain caudal and dorsal to the ventral tegmental area. It is one of three parts of the midbrain reticular nucleus; the other two are the magnocellular part of the midbrain reticular nucleus and the parvicellular part of the midbrain reticular nucleus (Swanson-2004). BrainInfo distinguishes between the Retrorubral area of the midbrain reticular formation and the retrorubral nucleus.") AnnotationAssertion(Annotation( "NLXANAT:20090301") "A8") AnnotationAssertion(Annotation( ) "retrorubal field") AnnotationAssertion( ) AnnotationAssertion( "BAMS:RR") AnnotationAssertion( "DHBA:12289") AnnotationAssertion( "DMBA:16884") AnnotationAssertion( "MBA:246") AnnotationAssertion( "NLXANAT:20090301") AnnotationAssertion(Annotation( "NLXANAT:20090301") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=1036") AnnotationAssertion(Annotation( "ABA:RR") "midbrain reticular nucleus, retrorubral area") AnnotationAssertion(Annotation( "NLXANAT:20090301") "retrorubral area") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:1036") "area 11 of Brodmann (guenon)") AnnotationAssertion(Annotation( "NeuroNames:1036") Annotation( ) "area orbitalis interna") AnnotationAssertion(Annotation( "NeuroNames:1036") "brodmann's area 11") AnnotationAssertion(Annotation( "BAMS:RR") "midbraiin reticular nucleus, retrorubral area") AnnotationAssertion(Annotation( "BAMS:RR") "retrorubral field") AnnotationAssertion(Annotation( "BAMS:RR") "retrorubral nucleus") AnnotationAssertion( "UBERON:0011172") AnnotationAssertion(rdfs:label "retrorubral area of midbrain reticular nucleus") SubClassOf( ) SubClassOf(Annotation( "Obol") ObjectSomeValuesFrom( )) # Class: (anterior division of bed nuclei of stria terminalis) AnnotationAssertion(Annotation( ) "One of two divisions of the nuclei of stria terminalis based on topology, connectivity and multiple stains in the rat ( Swanson-2004 ) and the mouse ( Dong-2004 ). The other division consists of the posterior nuclei of stria terminalis. The anterior division includes the anterolateral area of stria terminalis, anteromedial area of stria terminalis, oval nucleus of stria terminalis, juxtacapsular nucleus of stria terminalis, rhomboid nucleus of stria terminalis, dorsomedial nucleus of stria terminalis, fusiform nucleus of stria terminalis, ventral nucleus of stria terminalis, and the magnocellular nucleus of stria terminalis.") AnnotationAssertion(Annotation( "MA:0000926") "anterior division") AnnotationAssertion( ) AnnotationAssertion( "BAMS:BSTa") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37407") AnnotationAssertion( "MA:0000926") AnnotationAssertion( "MBA:359") AnnotationAssertion(Annotation( ) "anterior nuclei of stria terminalis") AnnotationAssertion(Annotation( "ABA:BSTa") "bed nuclei of the stria terminalis, anterior division") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BAMS:BSTa") "anterior part of the bed nucleus of the stria terminalis") AnnotationAssertion(Annotation( "BAMS:BSTa") "bed nuclei of the stria terminalis anterior division") AnnotationAssertion(Annotation( "BAMS:BSTa") "bed nuclei of the stria terminals anterior division") AnnotationAssertion(Annotation( "BAMS:BSTa") "bed nucleus of the stria terminalis anterior division") AnnotationAssertion(Annotation( "BAMS:BSTa") "bed nucleus of the stria terminalis anterior part") AnnotationAssertion(Annotation( "BAMS:BSTa") "bed nucleus of thestria terminalis anterior division") AnnotationAssertion( "UBERON:0011173") AnnotationAssertion(rdfs:label "anterior division of bed nuclei of stria terminalis") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "MA"^^xsd:string) ObjectSomeValuesFrom( )) DisjointClasses(Annotation( "lexical"^^xsd:string) ) # Class: (fusiform nucleus of stria terminalis) AnnotationAssertion(Annotation( "MA:0000927") "fusiform nucleus") AnnotationAssertion( ) AnnotationAssertion( "BAMS:BSTfu") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37591") AnnotationAssertion( "MA:0000927") AnnotationAssertion( "MBA:513") AnnotationAssertion(Annotation( "ABA:BSTfu") "bed nuclei of the stria terminalis, anterior division, fusiform nucleus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BAMS:BSTfu") "bed nuclei of the stria terminalis anterior division fusiform nucleus") AnnotationAssertion(Annotation( "BAMS:BSTfu") "bed nuclei of the stria terminalis fusiform nucleus") AnnotationAssertion(Annotation( "BAMS:BSTfu") "bed nuclei of the stria terminals anterior division fusiform nucleus") AnnotationAssertion(Annotation( "BAMS:BSTfu") "bed nucleus of the stria terminalis fusiform nucleus") AnnotationAssertion(Annotation( "BAMS:BSTfu") "bed nucleus of the stria terminalis fusiform part") AnnotationAssertion( "UBERON:0011175") AnnotationAssertion(rdfs:label "fusiform nucleus of stria terminalis") SubClassOf( ) SubClassOf(Annotation( "MA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (oval nucleus of stria terminalis) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37667") AnnotationAssertion( "MA:0000929") AnnotationAssertion( "MBA:554") AnnotationAssertion( "NLX:77783") AnnotationAssertion(Annotation( "ABA:BSTov") "bed nuclei of the stria terminalis, anterior division, oval nucleus") AnnotationAssertion(Annotation( "MA:0000929") "oval nucleus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011176") AnnotationAssertion(rdfs:label "oval nucleus of stria terminalis") SubClassOf( ) SubClassOf(Annotation( "MA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (posterior division of bed nuclei of stria terminalis) AnnotationAssertion(Annotation( ) "One of two divisions of the nuclei of stria terminalis based on topology, connectivity and multiple stains in the rat ( Swanson-2004 ) and the mouse ( Dong-2004 ). The other division consists of the anterior nuclei of stria terminalis. The posterior division includes the principal nucleus of stria terminalis, interfascicular nucleus of stria terminalis, transverse nucleus of stria terminalis, premedullary nucleus of stria terminalis, dorsal nucleus of stria terminalis, the strial extension of stria terminalis, and the cell sparse zone of stria terminalis.") AnnotationAssertion(Annotation( "MA:0000930") "posterior division") AnnotationAssertion( ) AnnotationAssertion( "BAMS:BSTp") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37408") AnnotationAssertion( "MA:0000930") AnnotationAssertion( "MBA:367") AnnotationAssertion(Annotation( "ABA:BSTp") "bed nuclei of the stria terminalis, posterior division") AnnotationAssertion(Annotation( ) "posterior nuclei of stria terminalis") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BAMS:BSTp") "bed nuclei of the stria terminalis posterior division") AnnotationAssertion(Annotation( "BAMS:BSTp") "bed nucleus of stria terminalis posterior part") AnnotationAssertion(Annotation( "BAMS:BSTp") "bed nucleus of the stria terminalis posterior division") AnnotationAssertion(Annotation( "BAMS:BSTp") "posterior part of the bed nucleus of the stria terminalis") AnnotationAssertion( "UBERON:0011177") AnnotationAssertion(rdfs:label "posterior division of bed nuclei of stria terminalis") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "MA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (principal nucleus of stria terminalis) AnnotationAssertion(Annotation( "MA:0000931") "principal nucleus") AnnotationAssertion( ) AnnotationAssertion( "BAMS:BSTpr") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37726") AnnotationAssertion( "MA:0000931") AnnotationAssertion( "MBA:578") AnnotationAssertion(Annotation( "ABA:BSTpr") "bed nuclei of the stria terminalis, posterior division, principal nucleus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BAMS:BSTpr") "bed nuclei of the stria terminalis posterior division principal nucleus") AnnotationAssertion(Annotation( "BAMS:BSTpr") "bed nuclei of the stria terminalis principal nucleus") AnnotationAssertion(Annotation( "BAMS:BSTpr") "bed nucleus of the stria terminalis principal (encapsulated) nucleus") AnnotationAssertion( "UBERON:0011178") AnnotationAssertion(rdfs:label "principal nucleus of stria terminalis") SubClassOf( ) SubClassOf(Annotation( "MA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (transverse nucleus of stria terminalis) AnnotationAssertion(Annotation( "MA:0000932") "transverse nucleus") AnnotationAssertion( ) AnnotationAssertion( "BAMS:BSTtr") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37727") AnnotationAssertion( "MA:0000932") AnnotationAssertion( "MBA:594") AnnotationAssertion(Annotation( "ABA:BSTtr") "bed nuclei of the stria terminalis, posterior division, transverse nucleus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BAMS:BSTtr") "bed nuclei of the stria terminalis posterior division transverse nucleus") AnnotationAssertion(Annotation( "BAMS:BSTtr") "bed nuclei of the stria terminalis transverse nucleus") AnnotationAssertion(Annotation( "BAMS:BSTtr") "bed nucleus of the stria terminalis transverse nucleus") AnnotationAssertion( "UBERON:0011179") AnnotationAssertion(rdfs:label "transverse nucleus of stria terminalis") SubClassOf( ) SubClassOf(Annotation( "MA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (corpus spongiosum of penis) AnnotationAssertion(Annotation( ) "Corpus spongiosum (also known as corpus cavernosum urethrae in older texts) is the mass of spongy tissue surrounding the male urethra within the penis.") AnnotationAssertion(Annotation( "WP"^^xsd:string) "The function of the corpus spongiosum in erection is to prevent the urethra from pinching closed, thereby maintaining the urethra as a viable channel for ejaculation. To do this, the corpus spongiosum remains pliable during erection while the corpora cavernosum penis becomes engorged with blood.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:29850") AnnotationAssertion( "EMAPA:29856") AnnotationAssertion( "FMA:19617") AnnotationAssertion( "NCIT:C32384") AnnotationAssertion(Annotation( "ncithesaurus:Corpus_Spongiosum") "UMLS:C1522442") AnnotationAssertion(Annotation( "FMA:19617") "spongiose body of penis") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "corpus cavernosum urethra") AnnotationAssertion(Annotation( ) Annotation( ) "corpus cavernosum urethrae") AnnotationAssertion(Annotation( ) "corpus spongiosum") AnnotationAssertion( "UBERON:0011183") AnnotationAssertion(rdfs:label "corpus spongiosum of penis") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/f/f6/Gray1155.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (epithelium of crypt of Lieberkuhn) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An epithelium that is part of a crypt of Lieberkuhn.") AnnotationAssertion(Annotation( "FMA"^^xsd:string) "FMA has classes for subdivisions of this epithelium") AnnotationAssertion( "crypt epithelium") AnnotationAssertion( ) AnnotationAssertion( "NCIT:C83191") AnnotationAssertion(Annotation( "ncithesaurus:Crypt_Epithelium") "UMLS:C2826787") AnnotationAssertion( "intestinal crypt epithelium") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011184") AnnotationAssertion(rdfs:label "epithelium of crypt of Lieberkuhn") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (gastrointestinal sphincter) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A sphincter muscle that is part of the gastrointestinal system.") AnnotationAssertion( ) AnnotationAssertion( "NCIT:C32669") AnnotationAssertion(Annotation( "ncithesaurus:Gastrointestinal_Sphincter") "UMLS:C1517464") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011185") AnnotationAssertion(rdfs:label "gastrointestinal sphincter") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (Krause's gland) AnnotationAssertion(Annotation( ) "Small, mucous accessory lacrimal glands that are found underneath the eyelid where the upper and lower conjuctivae meet. Their ducts unite into a rather long sinus which open into the fornix conjunctiva. There are approximately forty Krause glands in the region of the upper eyelid, and around 6 to 8 in the region of the lower lid. The function of these glands are to produce tears which are secreted onto the surface of the conjuctiva.") AnnotationAssertion(Annotation( "FMA:59056") "accessory lacrimal gland") AnnotationAssertion(Annotation( "FMA:59056") "conjunctival gland") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:59056") AnnotationAssertion( "NCIT:C32678") AnnotationAssertion(Annotation( "ncithesaurus:Gland_of_Krause") "UMLS:C1306642") AnnotationAssertion(Annotation( "FMA:59056") "Krause gland") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011186") AnnotationAssertion(rdfs:label "Krause's gland") SubClassOf( ) SubClassOf(Annotation( "ncithesaurus"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (ventral tubercle of humerus) AnnotationAssertion(Annotation( ) "The greater tubercle of the humerus is situated lateral to the head of the humerus and posteriolateral to the lesser tubercle. Its upper surface is rounded and marked by three flat impressions. the highest of these gives ('superior facet') insertion to the Supraspinatus the middle ('middle facet') to the Infraspinatus. the lowest one ('inferior facet'), and the body of the bone for about 2.5 cm. below it, to the Teres minor. The lateral surface of the greater tubercle is convex, rough, and continuous with the lateral surface of the body. Between the greater tubercle and the lesser tubercle is the intertubercular sulcus (bicipital groove).") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:23390") AnnotationAssertion( "NCIT:C32700") AnnotationAssertion(Annotation( "ncithesaurus:Greater_Tuberosity") "UMLS:C1512275") AnnotationAssertion(Annotation( "FMA:23390") "greater tubercle") AnnotationAssertion(Annotation( "FMA:23390") "greater tubercle of humerus") AnnotationAssertion(Annotation( "FMA:23390") "greater tuberosity of humerus") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) Annotation( ) "tuberculum majus") AnnotationAssertion(Annotation( ) "tuberculum majus humeri") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "greater tubercle of the humerus") AnnotationAssertion(Annotation( ) "greater tuberosity") AnnotationAssertion( "UBERON:0011187") AnnotationAssertion(rdfs:label "ventral tubercle of humerus") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/3/3b/Gray326.png"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (lesser tubercle of humerus) AnnotationAssertion(Annotation( ) "The lesser tubercle of the humerus, although smaller, is more prominent than the greater tubercle: it is situated in front, and is directed medially and anteriorly. Above and in front it presents an impression for the insertion of the tendon of the Subscapularis.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:23393") AnnotationAssertion( "NCIT:C32983") AnnotationAssertion(Annotation( "ncithesaurus:Lesser_Tuberosity") "UMLS:C0223687") AnnotationAssertion(Annotation( "FMA:23393") "lesser tubercle") AnnotationAssertion(Annotation( "FMA:23393") "lesser tuberosity of humerus") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) Annotation( ) "tuberculum minus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "lesser tubercle of humerus") AnnotationAssertion(Annotation( ) "lesser tubercle of the humerus") AnnotationAssertion( "UBERON:0011188") AnnotationAssertion(rdfs:label "lesser tubercle of humerus") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/3/31/Tuberculumminushumeri.png"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (lamina propria of large intestine) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A lamina propria that is part of a large intestine.") AnnotationAssertion( ) AnnotationAssertion( "FMA:15654") AnnotationAssertion( "NCIT:C49298") AnnotationAssertion(Annotation( "ncithesaurus:Large_Intestinal_Lamina_Propria") "UMLS:C1708644") AnnotationAssertion(Annotation( "FMA:15654") "lamina propria of mucosa of large intestine") AnnotationAssertion( "large intestinal lamina propria") AnnotationAssertion(Annotation( "FMA:15654") "large intestine lamina propria") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011189") AnnotationAssertion(rdfs:label "lamina propria of large intestine") SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (lunule of nail) AnnotationAssertion(Annotation( ) "A crescent-shaped whitish area of the bed of a fingernail or toenail. The lunula is the visible part of the nail matrix (i.e. the root of the nail).") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:77858") AnnotationAssertion( "NCIT:C33025") AnnotationAssertion(Annotation( "ncithesaurus:Lunula") "UMLS:C0221991") AnnotationAssertion( "lunula") AnnotationAssertion(Annotation( "FMA:77858") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "lunula unguis") AnnotationAssertion(Annotation( "FMA:77858") "nail lunule") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011190") AnnotationAssertion(rdfs:label "lunule of nail") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (ophthalmic vein) AnnotationAssertion(Annotation( ) "Ophthalmic veins are veins which drain the eye. More specifically, they can refer to: Superior ophthalmic vein Inferior ophthalmic vein.") AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0004113") AnnotationAssertion( "EMAPA:19313") AnnotationAssertion( "XAO:0004169") AnnotationAssertion(Annotation( "EHDAA2:0004113") "opthalmic vein") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "vena ophthalmica") AnnotationAssertion( "UBERON:0011191") AnnotationAssertion(rdfs:label "ophthalmic vein") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/0/02/Gray572.png"^^xsd:anyURI) SubClassOf(Annotation( "EHDAA2-modified") ) # Class: (superior ophthalmic vein) AnnotationAssertion(Annotation( ) "The superior ophthalmic vein begins at the inner angle of the orbit in a vein named the nasofrontal which communicates anteriorly with the angular vein; it pursues the same course as the ophthalmic artery, and receives tributaries corresponding to the branches of that vessel. Forming a short single trunk, it passes between the two heads of the Rectus lateralis and through the medial part of the superior orbital fissure, and ends in the cavernous sinus. The ethmoidal veins drain into the superior ophthalmic vein. Vorticose veins also drain into the superior ophthalmic vein.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:51246") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "anterior ethmoidal vein") AnnotationAssertion(Annotation( ) "posterior ethmoidal vein") AnnotationAssertion(Annotation( ) "superior ophthalmic") AnnotationAssertion( "superior opthalmic vein") AnnotationAssertion( "UBERON:0011192") AnnotationAssertion(rdfs:label "superior ophthalmic vein") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/0/02/Gray572.png"^^xsd:anyURI) SubClassOf( ) # Class: (inferior ophthalmic vein) AnnotationAssertion(Annotation( ) "The inferior ophthalmic vein begins in a venous net-work at the forepart of the floor and medial wall of the orbit; it receives some vorticose veins and other veins from the Rectus inferior, Obliquus inferior, lacrimal sac and eyelids, runs backward in the lower part of the orbit and divides into two branches. One of these passes through the inferior orbital fissure and joins the pterygoid venous plexus, while the other enters the cranium through the superior orbital fissure and ends in the cavernous sinus, either by a separate opening, or more frequently in common with the superior ophthalmic vein.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:51247") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "inferior ophthalmic") AnnotationAssertion( "inferior opthalmic vein") AnnotationAssertion( "UBERON:0011193") AnnotationAssertion(rdfs:label "inferior ophthalmic vein") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/0/02/Gray572.png"^^xsd:anyURI) SubClassOf( ) # Class: (ophthalmic plexus) AnnotationAssertion(Annotation( ) "An autonomic plexus, entering the orbit in company with the ophthalmic artery, derived from the internal carotid plexus.") AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37704") AnnotationAssertion( "FMA:312377") AnnotationAssertion( "MA:0002185") AnnotationAssertion( "NCIT:C53057") AnnotationAssertion(Annotation( "ncithesaurus:Ophthalmic_Plexus") "UMLS:C1709326") AnnotationAssertion( "ophthalmic nerve plexus") AnnotationAssertion(Annotation( "MA:0002185") "ophthalmic plexus") AnnotationAssertion( "opthalmic plexus") AnnotationAssertion(Annotation( ) "plexus ophthalmicus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011194") AnnotationAssertion(rdfs:label "ophthalmic plexus") SubClassOf(Annotation( "ncithesaurus"^^xsd:string) ) # Class: (inferior parathyroid epithelium) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An epithelium that is part of a inferior parathyroid gland.") AnnotationAssertion( "EHDAA2:0000824") AnnotationAssertion( "EHDAA:3868") AnnotationAssertion(Annotation( ) "parathyroid III epithelium") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011195") AnnotationAssertion(rdfs:label "inferior parathyroid epithelium") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (superior parathyroid epithelium) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An epithelium that is part of a superior parathyroid gland.") AnnotationAssertion( "EHDAA2:0001957") AnnotationAssertion( "EHDAA:3874") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011196") AnnotationAssertion(rdfs:label "superior parathyroid epithelium") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (parathyroid epithelium) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An epithelium that is part of a parathyroid gland.") AnnotationAssertion( ) AnnotationAssertion( "CALOHA:TS-2141") AnnotationAssertion( "NCIT:C48258") AnnotationAssertion(Annotation( "ncithesaurus:Parathyroid_Gland_Epithelial_Tissue") "UMLS:C1709466") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011197") AnnotationAssertion(rdfs:label "parathyroid epithelium") SubClassOf(Annotation( "EHDAA2-abduced") ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (muscle layer of large intestine) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A muscle layer that is part of a large intestine.") AnnotationAssertion( ) AnnotationAssertion( "FMA:14971") AnnotationAssertion( "NCIT:C32927") AnnotationAssertion(Annotation( "ncithesaurus:Large_Intestinal_Muscular_Coat") "UMLS:C0734205") AnnotationAssertion(Annotation( "FMA:14971") "muscular coat of large intestine") AnnotationAssertion(Annotation( "FMA:14971") "muscular layer of large intestine") AnnotationAssertion(Annotation( "FMA:14971") "muscularis externa of large intestine") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) Annotation( ) "tunica muscularis intestini crassi") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011198") AnnotationAssertion(rdfs:label "muscle layer of large intestine") SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (prostatic utricle) AnnotationAssertion(Annotation( ) "A small indentation located in the prostatic urethra, at the apex of the urethral crest, on the seminal colliculus (verumontanum), laterally flanked by openings of the ejaculatory ducts.") AnnotationAssertion( "add df relations. Check mesopnephric duct") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:19702") AnnotationAssertion( "NCIT:C63862") AnnotationAssertion(Annotation( "ncithesaurus:Prostatic_Utricle") "UMLS:C0227736") AnnotationAssertion(Annotation( "FMA:19702") "sinus pocularis") AnnotationAssertion(Annotation( "FMA:19702") "uterus masculinus") AnnotationAssertion(Annotation( "FMA:19702") "utricle of prostate") AnnotationAssertion(Annotation( "FMA:19702") "utriculus of prostate") AnnotationAssertion(Annotation( ) Annotation( "FMA:19702") Annotation( ) "vagina masculina") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "uterus masculinus") AnnotationAssertion(Annotation( ) Annotation( ) "utriculus prostaticus") AnnotationAssertion(Annotation( ) "vagina masculina") AnnotationAssertion(Annotation( ) Annotation( ) "vesicula prostatica") AnnotationAssertion( "UBERON:0011199") AnnotationAssertion(rdfs:label "prostatic utricle") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/d/d4/Gray1153.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (muscle layer of small intestine) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A muscle layer that is part of a small intestine.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:14932") AnnotationAssertion( "NCIT:C33569") AnnotationAssertion(Annotation( "ncithesaurus:Small_Intestinal_Muscular_Coat") "UMLS:C0227269") AnnotationAssertion(Annotation( "FMA:14932") "muscular coat of small intestine") AnnotationAssertion(Annotation( "FMA:14932") "muscular layer of small intestine") AnnotationAssertion(Annotation( "FMA:14932") "muscularis externa of small intestine") AnnotationAssertion(Annotation( "FMA:14932") "small intestine muscularis propria") AnnotationAssertion(Annotation( "FMA:14932") "tunica muscularis (intestinum tenue)") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) Annotation( ) "tunica muscularis intestini tenuis") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011201") AnnotationAssertion(rdfs:label "muscle layer of small intestine") SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (urachus epithelium) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An epithelium that is part of a urachus.") AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0004725") AnnotationAssertion( "NCIT:C54210") AnnotationAssertion(Annotation( "ncithesaurus:Urachal_Epithelium") "UMLS:C1711256") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011202") AnnotationAssertion(rdfs:label "urachus epithelium") SubClassOf(Annotation( "EHDAA2"^^xsd:string) ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (urachus mesenchyme) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "Mesenchyme that is part of a developing urachus.") AnnotationAssertion( "EHDAA2:0004726") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011203") AnnotationAssertion(rdfs:label "urachus mesenchyme") SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (rectovesical pouch) AnnotationAssertion(Annotation( ) "Between the rectum and the bladder the peritoneal cavity forms, in the male, a pouch, the rectovesical excavation (or rectovesical pouch), the bottom of which is slightly below the level of the upper ends of the vesiculae seminalesbi. e. , about 7.5 cm. from the orifice of the anus. its lowest part membranous partition called Rectoprostatic fascia. The corresponding structure in women is the rectouterine pouch.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:14727") AnnotationAssertion( "NCIT:C33448") AnnotationAssertion(Annotation( "ncithesaurus:Recto-Vesical_Pouch") "UMLS:C0230301") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) Annotation( ) "excavatio rectovesicalis") AnnotationAssertion(Annotation( "FMA:14727") "recto-vesical pouch") AnnotationAssertion(Annotation( "FMA:14727") "rectovesical space") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "excavatio rectovesicalis") AnnotationAssertion(Annotation( ) "rectovesical") AnnotationAssertion(Annotation( ) "rectovesical excavation") AnnotationAssertion(Annotation( ) "rectovesical pouch") AnnotationAssertion(Annotation( ) "retrovesical excavation") AnnotationAssertion( "UBERON:0011204") AnnotationAssertion(rdfs:label "rectovesical pouch") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/4/45/Gray1228.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (hinge joint) AnnotationAssertion(Annotation( ) Annotation( "BTO:0004707") "A joint that allows motion around an axis.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0004707") AnnotationAssertion( "FMA:75296") AnnotationAssertion( "galen:HingeJoint") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0004707") "ginglymus") AnnotationAssertion( "UBERON:0011206") AnnotationAssertion(rdfs:label "hinge joint") AnnotationAssertion( "Gelenke:Zeichnung01.jpg"^^xsd:anyURI) SubClassOf(Annotation( "BTO"^^xsd:string) ) # Class: (iliocostalis lumborum) AnnotationAssertion(Annotation( ) "The iliocostalis lumborum (iliocostalis muscle; sacrolumbalis muscle) is inserted, by six or seven flattened tendons, into the inferior borders of the angles of the lower six or seven ribs.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:22702") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "sacrolumbalis") AnnotationAssertion(Annotation( ) "sacrolumbalis muscle") AnnotationAssertion( "UBERON:0011207") AnnotationAssertion(rdfs:label "iliocostalis lumborum") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (medial migration pathway NC-derived mesenchyme) AnnotationAssertion( "EHDAA2:0001075") AnnotationAssertion( "EHDAA:1747") AnnotationAssertion( "EMAPA:16597") AnnotationAssertion( "TAO:0000786") AnnotationAssertion( "ZFA:0000786") AnnotationAssertion(Annotation( "ZFA:0000786") "medial migration pathway mesenchyme") AnnotationAssertion( "uberon") AnnotationAssertion( "medial migration pathway") AnnotationAssertion( "UBERON:0011208") AnnotationAssertion(rdfs:label "medial migration pathway NC-derived mesenchyme") SubClassOf( ) DisjointClasses(Annotation( "lexical"^^xsd:string) ) # Class: (lateral migration pathway NC-derived mesenchyme) AnnotationAssertion( "EHDAA2:0000915") AnnotationAssertion( "EHDAA:1745") AnnotationAssertion( "EMAPA:16596") AnnotationAssertion( "TAO:0000992") AnnotationAssertion( "ZFA:0000992") AnnotationAssertion(Annotation( "ZFA:0000992") "lateral migration pathway mesenchyme") AnnotationAssertion( "uberon") AnnotationAssertion( "lateral migration pathway") AnnotationAssertion( "UBERON:0011209") AnnotationAssertion(rdfs:label "lateral migration pathway NC-derived mesenchyme") SubClassOf( ) # Class: (migration pathway NC-derived mesenchyme) AnnotationAssertion( "migration pathway mesenchyme") AnnotationAssertion( "uberon") AnnotationAssertion( "NC migration pathway") AnnotationAssertion( "UBERON:0011210") AnnotationAssertion(rdfs:label "migration pathway NC-derived mesenchyme") SubClassOf( ) SubClassOf(Annotation( "EHDAA2-abduced") ) SubClassOf(Annotation( "EHDAA2-abduced") ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2-abduced") Annotation( "ZFA-abduced") ObjectSomeValuesFrom( )) # Class: (root of vagus nerve) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A root of cranial nerve that is part of a vagus nerve.") AnnotationAssertion(Annotation( "FMA"^^xsd:string) "FMA distinguishes between roots and rootlets - we mix the two here") AnnotationAssertion(Annotation( "ZFA:0007011") "rX") AnnotationAssertion( "BIRNLEX:1456") AnnotationAssertion( "DHBA:12888") AnnotationAssertion( "DMBA:17748") AnnotationAssertion( "FMA:6213") AnnotationAssertion( "ZFA:0007011") AnnotationAssertion(Annotation( "FMA:6213") "rootlet of vagus nerve") AnnotationAssertion(Annotation( "ZFA:0007011") "vagal root") AnnotationAssertion(Annotation( "BIRNLEX:1456") "vagus nerve root") AnnotationAssertion(Annotation( "ZFA:0007011") "vagus root") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:6213") "vagus neural rootlet") AnnotationAssertion( "UBERON:0011213") AnnotationAssertion(rdfs:label "root of vagus nerve") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (nucleus of midbrain tectum) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A neural nucleus that is part of a midbrain tectum.") AnnotationAssertion( "tectal nucleus") AnnotationAssertion( "FMA:258766") AnnotationAssertion(Annotation( "FMA:258766") "nucleus of tectum") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011214") AnnotationAssertion(rdfs:label "nucleus of midbrain tectum") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (central nervous system cell part cluster) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A multi cell part structure that is part of a central nervous system.") AnnotationAssertion( "FMA:83143") AnnotationAssertion(Annotation( "FMA:83143") "cell part cluster of neuraxis") AnnotationAssertion(Annotation( "FMA:83143") "neuraxis layer") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011215") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "central nervous system cell part cluster") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (organ system subdivision) AnnotationAssertion(Annotation( ) "A subdivision of an anatomical system.") AnnotationAssertion( ) AnnotationAssertion( "FBbt:00007330") AnnotationAssertion( "FMA:67509") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011216") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "organ system subdivision") SubClassOf(Annotation( "FBbt") ) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses(Annotation( "FBbt") ) # Class: (serratus dorsalis muscle) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:36269") AnnotationAssertion( "FMA:13400") AnnotationAssertion( "serratus dorsalis") AnnotationAssertion(Annotation( "FMA:13400") "serratus posterior") AnnotationAssertion(Annotation( "FMA:13400") "serratus posterior muscle") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011217") AnnotationAssertion(rdfs:label "serratus dorsalis muscle") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf(Annotation( "dbpedia-abduced") ObjectSomeValuesFrom( )) SubClassOf(Annotation( "dbpedia-abduced") ObjectSomeValuesFrom( )) # Class: (spinalis cervicis muscle) AnnotationAssertion(Annotation( "BTO:0002623") "Origin: spinous processes of seventh cervical and sometimes two upper thoracic vertebrae; insertion: spinous processes of axis and sometimes of second to fourth cervical vertebrae; innervation: branches of cervical; action: extends vertebral column.") AnnotationAssertion( ) AnnotationAssertion( "BTO:0002623") AnnotationAssertion( "FMA:22770") AnnotationAssertion(Annotation( "BTO:0002623") "spinal muscle of neck") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0002623") "musculus spinalis cervicis") AnnotationAssertion( "UBERON:0011218") AnnotationAssertion(rdfs:comment "The Spinalis cervicis (Spinalis colli) is an inconstant muscle, which arises from the lower part of the ligamentum nuchæ, the spinous process of the seventh cervical, and sometimes from the spinous processes of the first and second thoracic vertebrae, and is inserted into the spinosus process of the axis, and occasionally into the spinous processes of the two vertebrae below it. [Wikipedia:Spinalis#Spinalis_cervivis]") AnnotationAssertion(rdfs:label "spinalis cervicis muscle") SubClassOf(Annotation( "BTO"^^xsd:string) ) SubClassOf(Annotation( "also spinous process of C7") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (longissimus lumborum muscle) AnnotationAssertion(Annotation( "BTO:0001925") "Lumbar muscle that extends and rotates the vertebral column.") AnnotationAssertion( ) AnnotationAssertion( "BTO:0001925") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37652") AnnotationAssertion( "MA:0002338") AnnotationAssertion( "NCIT:C52954") AnnotationAssertion(Annotation( "ncithesaurus:Longissimus_Lumborum") "UMLS:C1708736") AnnotationAssertion(Annotation( "MA:0002338") "longissimus lumborum") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0001925") "musculus longissimus lumborum") AnnotationAssertion( "UBERON:0011219") AnnotationAssertion(rdfs:label "longissimus lumborum muscle") SubClassOf( ) # Class: (mastoid process of temporal bone) AnnotationAssertion(Annotation( ) "The mastoid process is a conical prominence projecting from the undersurface of the mastoid portion of the temporal bone. It is located just behind the external acoustic meatus, and lateral to the styloid process. Its size and form vary somewhat; it is larger in the male than in the female. This process serves for the attachment of the posterior belly of the digastric, sternocleidomastoid, splenius capitis, and longissimus capitis muscles. The word is derived from the Greek 'masto-', alluding to its resemblance to the breast.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:52872") AnnotationAssertion( "NCIT:C12503") AnnotationAssertion(Annotation( "ncithesaurus:Mastoid_Process") "UMLS:C0446908") AnnotationAssertion(Annotation( "FMA:52872") "mastoid process") AnnotationAssertion( "mastoid process of skull") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "mastoid") AnnotationAssertion(Annotation( ) "processus mastoideus ossis temporalis") AnnotationAssertion( "UBERON:0011220") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "mastoid process of temporal bone") SubClassOf(Annotation( "ncithesaurus"^^xsd:string) ) SubClassOf(Annotation( "ncithesaurus"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (ora serrata of retina) AnnotationAssertion(Annotation( ) "The ora serrata is the serrated junction between the retina and the ciliary body. This junction marks the transition from the simple non-photosensitive area of the retina to the complex, multi-layered photosensitive region. In animals in which the region does not have a serrated appearance, it is called the ora ciliaris retinae.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:58600") AnnotationAssertion(Annotation( "FMA:58600") "ora serrata") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) Annotation( ) "ora serrata retinae") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "ora ciliaris retina") AnnotationAssertion(Annotation( ) "ora ciliaris retinae") AnnotationAssertion( "UBERON:0011221") AnnotationAssertion(rdfs:label "ora serrata of retina") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (intra-ocular muscle) AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0010038") Annotation( "AAO"^^xsd:string) Annotation( "AAO:EJS"^^xsd:string) "Muscles within the eye (bulbus oculi).[AAO]") AnnotationAssertion( "AAO:0010038") AnnotationAssertion( "EMAPA:18808") AnnotationAssertion( "FMA:49150") AnnotationAssertion( "intrinsic muscle of eyeball") AnnotationAssertion(Annotation( "EMAPA:18808") "intrinsic ocular muscle") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011222") AnnotationAssertion(rdfs:label "intra-ocular muscle") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "EMAPA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (synovial membrane of synovial tendon sheath) AnnotationAssertion(Annotation( ) Annotation( "FMA:45087") "Synovial sac which surrounds parts of one or more tendons. Examples: synovial tendon sheath of manual digit 2, radial bursa.") AnnotationAssertion(Annotation( "BTO:0001823") "synovium") AnnotationAssertion( ) AnnotationAssertion( "BTO:0001823") AnnotationAssertion( "FMA:40878") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011233") AnnotationAssertion(rdfs:comment "Alternate def: A synovial sheath is a layer of a tendon sheath containing tendons in the hand and foot. They lie internal to the fibrous tendon sheaths. An example is the common synovial sheath for the flexor tendons. [Wikipedia:Synovial_sheath]") AnnotationAssertion(rdfs:label "synovial membrane of synovial tendon sheath") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (fibrous membrane of synovial tendon sheath) AnnotationAssertion( "FMA:40877") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011234") AnnotationAssertion(rdfs:label "fibrous membrane of synovial tendon sheath") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (deep fascia) AnnotationAssertion(Annotation( ) "Deep fascia (or 'investing fascia') is a layer of fascia which can surround individual muscles, and divide groups of muscles into compartments. This is the dense fibrous connective tissue that interpenetrates and surrounds the muscles, bones, nerves and blood vessels of the body. It provides connection and communication in the form of aponeuroses, ligaments, tendons, retinacula, joint capsules, and septa. The deep fasciae envelop all bone; cartilage, and blood vessels and become specialized in muscles and nerves. The high density of collagen fibers is what gives the deep fascia its strength and integrity. The amount of elastin fiber determines how much extensibility and resilience it will have.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:27935") AnnotationAssertion( "NCIT:C32435") AnnotationAssertion(Annotation( "ncithesaurus:Deep_Fascia") "UMLS:C1511746") AnnotationAssertion(Annotation( ) Annotation( ) "fascia profunda") AnnotationAssertion(Annotation( ) "deep investing fascia") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "deep fasciae") AnnotationAssertion(Annotation( ) "fascia of muscles") AnnotationAssertion(Annotation( ) "investing fascia") AnnotationAssertion( "UBERON:0011236") AnnotationAssertion(rdfs:label "deep fascia") SubClassOf( ) # Class: (visceral fascia) AnnotationAssertion(Annotation( ) "Fascia that suspends a visceral organ.") AnnotationAssertion(Annotation( "FMA"^^xsd:string) "FMA considers parietal fascia a different class") AnnotationAssertion( ) AnnotationAssertion( "FMA:76754") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "parietal fascia") AnnotationAssertion( "UBERON:0011237") AnnotationAssertion(rdfs:comment "Visceral fascia suspends the organs within their cavities and wraps them in layers of connective tissue membranes. Each of the organs is covered in a double layer of fascia; these layers are separated by a thin serous membrane. The outermost wall of the organ is known as the parietal layer The skin of the organ is known as the visceral layer. The organs have specialized names for their visceral fasciae. In the brain, they are known as meninges; in the heart they are known as pericardia; in the lungs, they are known as pleura; and in the abdomen, they are known as peritonea. [Wikipedia:Visceral_fascia]") AnnotationAssertion(rdfs:label "visceral fascia") SubClassOf( ) # Class: (mesethmoid bone) AnnotationAssertion(Annotation( ) "An ossified mesethmoid element.") AnnotationAssertion(Annotation( "TAO:0000323") "Endochondral bone that extends forward from the frontal bones and articulates posterolaterally with the lateral ethmoids and the vomer and parasphenoid ventrally. The mesethmoid is an unpaired bone[TAO:0000323].") AnnotationAssertion( "TAO:0000323") AnnotationAssertion( "ZFA:0000323") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "TAO:0000323") "ethmoid") AnnotationAssertion( "UBERON:0011238") AnnotationAssertion(rdfs:label "mesethmoid bone") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "ZFA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "ZFA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (ethmoid region) AnnotationAssertion(Annotation( ) Annotation( "UBERONREF:0000007") "The most anterior region of the braincase. Provides structural support for peripheral olfactory organ.") AnnotationAssertion( "currently this is not restricted to skeletal elements, unlike UBERONREF:0000007") AnnotationAssertion( "AAO:0000986") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011241") AnnotationAssertion(rdfs:label "ethmoid region") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (ethmoid cartilage) AnnotationAssertion(Annotation( "ISBN:0073040584"^^xsd:string) "Region between capsules formed by anterior tips of neurocranial trabeculae.") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0010134") Annotation( "AAO"^^xsd:string) Annotation( "AAO:EJS"^^xsd:string) "Anterior wall of the braincase.[AAO]") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0001405") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "Chondrocranium cartilage that is initially plate-like and formed from the anterior fusion of the trabecula crani. The ethmoid cartilage is paired.[TAO]") AnnotationAssertion(Annotation( "AAO"^^xsd:string) "We assume the AAO structure is cartilage") AnnotationAssertion( "AAO:0010134") AnnotationAssertion( "EFO:0003685") AnnotationAssertion( "TAO:0001405") AnnotationAssertion( "ZFA:0001405") AnnotationAssertion(Annotation( "TAO:0001405") Annotation( ) "ethmoid cartilages") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "TAO:0001405") "ethmoid plate") AnnotationAssertion( "UBERON:0011242") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "ethmoid cartilage") SubClassOf(Annotation( "TAO"^^xsd:string) ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "AAO"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "TAO"^^xsd:string) ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) SubClassOf(Annotation( "ISBN:0073040584"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (perpendicular plate of ethmoid) AnnotationAssertion(Annotation( ) "The perpendicular plate of the ethmoid bone (vertical plate) is a thin, flattened lamina, polygonal in form, which descends from the under surface of the cribriform plate, and assists in forming the septum of the nose; it is generally deflected a little to one or other side. The anterior border articulates with the spine of the frontal bone and the crest of the nasal bones. The posterior border articulates by its upper half with the sphenoidal crest, by its lower with the vomer. The inferior border is thicker than the posterior, and serves for the attachment of the septal cartilage of the nose. The surfaces of the plate are smooth, except above, where numerous grooves and canals are seen; these lead from the medial foramina on the cribriform plate and lodge filaments of the olfactory nerves.") AnnotationAssertion(Annotation( "EMAPA:25114") "perpendicular plate") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:25114") AnnotationAssertion( "FMA:52891") AnnotationAssertion( "MA:0003126") AnnotationAssertion(Annotation( "FMA:52891") "lamina perpendicularis (os ethmoidale)") AnnotationAssertion(Annotation( "FMA:52891") "lamina perpendicularis of ethmoid bone") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "lamina perpendicularis ossis ethmoidalis") AnnotationAssertion(Annotation( ) "perpendicular plate of the ethmoid bone") AnnotationAssertion(Annotation( ) "vertical plate of the ethmoid bone") AnnotationAssertion( "UBERON:0011244") AnnotationAssertion(rdfs:label "perpendicular plate of ethmoid") SubClassOf(Annotation( "cjm"^^xsd:string) ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (infra-orbital canal of maxilla) AnnotationAssertion(Annotation( "UBERON:cjm"^^xsd:string) "A canal through the maxilla that is connects the infra-orbital groove and foramen and is the conduit for the passage of the infraorbital nerve and artery.") AnnotationAssertion(Annotation( "FMA:59048") "infra-orbital canal") AnnotationAssertion(Annotation( ) "infraorbital canal") AnnotationAssertion( ) AnnotationAssertion( "FMA:59048") AnnotationAssertion(Annotation( "FMA:59048") Annotation( ) "canalis infra-orbitalis") AnnotationAssertion(Annotation( "FMA:59048") Annotation( ) "canalis infraorbitalis") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011245") AnnotationAssertion(rdfs:label "infra-orbital canal of maxilla") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses( ) DisjointClasses( ) # Class: (procoracoid bone) AnnotationAssertion( "VSAO sais that the procoracoid+coracoid are homologous to the teleost coracoid. Consider adding a separate class for posterior coracoid.") AnnotationAssertion(Annotation( "UBERON:0004743") Annotation( "ISBN:0073040584"^^xsd:string) "Kardong states that the procoracoid (or the anterior part of the procoracoid) is homologous to the coracoid, but this is controversial") AnnotationAssertion( "In primitive synapsis 3 centers develop in the shoulder: the dorsal center gives rise to the scapula and the two ventral centers produce an anterior coracoid (procoracoid) and posterior coracoid (coracoid)") AnnotationAssertion( ) AnnotationAssertion( "procoracoid process") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "ISBN:0073040584"^^xsd:string) "anterior coracoid") AnnotationAssertion(Annotation( "ISBN:0073040584"^^xsd:string) "anterior coracoid bone") AnnotationAssertion( "precoracoid") AnnotationAssertion(Annotation( "ISBN:0073040584"^^xsd:string) "precoracoid bone") AnnotationAssertion( "procoracoid") AnnotationAssertion( "UBERON:0011246") AnnotationAssertion(rdfs:label "procoracoid bone") AnnotationAssertion( "P.gigas:forelimb.jpg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (procoracoid cartilage) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011247") AnnotationAssertion(rdfs:label "procoracoid cartilage") SubClassOf( ) SubClassOf( ) # Class: (procoracoid element) AnnotationAssertion(Annotation( ) "Endochondral element of pectoral girdle, positioned posterior to the clavicle and anterior to the coracoid.") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0000760") Annotation( "AAO"^^xsd:string) Annotation( "AAO:LAP"^^xsd:string) "Cartilaginous, paired structures located on the anterolateral portions of the zonal area of the pectoral girdle.[AAO]") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0000760") Annotation( "AAO"^^xsd:string) "relationship loss: part_of zonal element (AAO:0000936)[AAO]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0000760") AnnotationAssertion(Annotation( "AAO:0000760") "procoracoid") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "ISBN:0073040584"^^xsd:string) "anterior coracoid") AnnotationAssertion(Annotation( "AAO:0000760") "precoracoid") AnnotationAssertion(Annotation( "ISBN:0073040584"^^xsd:string) "precoracoid") AnnotationAssertion( "UBERON:0011248") AnnotationAssertion(rdfs:label "procoracoid element") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (appendicular skeletal system) AnnotationAssertion(Annotation( ) "Subdivision of the skeletal system which consists of the appendicular skeleton plus associated joints.") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "VSAO:0000306") Annotation( "VSAO"^^xsd:string) Annotation( ) "Skeletal system which consists of the appendicular skeleton plus associated joints.[VSAO]") AnnotationAssertion( "FMA:7484") AnnotationAssertion( "VHOG:0001666") AnnotationAssertion( "VSAO:0000306") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011249") AnnotationAssertion(rdfs:label "appendicular skeletal system") AnnotationAssertion(rdfs:seeAlso "https://github.com/obophenotype/uberon/wiki/Appendages-and-the-appendicular-skeleton"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (autopod bone) AnnotationAssertion(Annotation( ) "A bone that is part of a autopod region. Note that this incudes the carpal and tarsal bones.") AnnotationAssertion( "https://github.com/obophenotype/uberon/wiki/Skeleton-partonomy-Design-Pattern"^^xsd:anyURI) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011250") AnnotationAssertion(rdfs:label "autopod bone") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (levator claviculae muscle) AnnotationAssertion(Annotation( ) "A skeletal muscle in the posterior triangle of the neck. It originates on the transverse processes of the upper cervical vertebrae and is inserted in the lateral half of the clavicle.") AnnotationAssertion(Annotation( "MURDOCH:378") "Cleidocervicalis is one of two muscles, which make up the cleidocephalic component of the complex brachiocephalic muscle. It is a thin triangular muscle which has a broad origin on the median raphe of the mid dorsal aspect of the neck. The muscle is bounded caudally by the trapezius and cranially by the occipital component of the sternocephalicus . The cleidocervicalis tapers as it passes ventrally across the side of the neck to insert into the clavicular tendon. It is innervated by the accessory nerve. The brachiocephalic complex advances the limb, extends the shoulder joint and fixes the neck.") AnnotationAssertion(Annotation( "WP"^^xsd:string) "The levator claviculae is an infrequently recognized anatomical variant in humans, distinguished from, for example, cervical adenopathy or a thrombosed vein, but a normal muscle in lower mammals and anthropoids. In humans, when present, it often appears unilaterally, most commonly on the left side, or bilaterally.") AnnotationAssertion( ) AnnotationAssertion(Annotation( ) "cleidocervicalis") AnnotationAssertion(Annotation( ) "cleidocervicalis muscle") AnnotationAssertion(Annotation( ) "levator claviculae") AnnotationAssertion(Annotation( ) Annotation( ) "musculus levator claviculae") AnnotationAssertion(Annotation( ) "omocervicalis") AnnotationAssertion(Annotation( ) "tracheloacromial muscle") AnnotationAssertion( "uberon") AnnotationAssertion( "pars cervicalis") AnnotationAssertion( "UBERON:0011251") AnnotationAssertion(rdfs:label "levator claviculae muscle") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "nterior portion of transverse processes of C1 - C4 vertebrae") Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "lateral half") Annotation( "Wikipedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (scent gland) AnnotationAssertion(Annotation( ) "Scent glands are exocrine glands found in most mammals. They produce semi-viscous secretions which contain pheromones and other semiochemical compounds. These odor-messengers indicate information such as status, territory marking, mood, and sexual power. The odor may be subliminal-not consciously detectable. Though it is not their primary function, the salivary glands may also function as scent glands in some animals.") AnnotationAssertion(Annotation( "MESH:A13.820") "Exocrine glands in animals which secrete scents which either repel or attract other animals, e.g. perianal glands of skunks, anal glands of weasels, musk glands of foxes, ventral glands of wood rats, and dorsal glands of peccaries[MESH:A13.820].") AnnotationAssertion( ) AnnotationAssertion( "BTO:0002068") AnnotationAssertion( "MESH:D012543") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011252") AnnotationAssertion(rdfs:label "scent gland") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/8/85/Civetglands.png"^^xsd:anyURI) SubClassOf( ) # Class: (gland of anal sac) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "NCIT:C32068") AnnotationAssertion(Annotation( "ncithesaurus:Anal_Gland") "UMLS:C0162322") AnnotationAssertion( "anal sac gland") AnnotationAssertion(Annotation( "NCBITaxon:29132") Annotation( ) "castor sac") AnnotationAssertion( "uberon") AnnotationAssertion( "anal gland") AnnotationAssertion( "musk gland") AnnotationAssertion( "UBERON:0011253") AnnotationAssertion(rdfs:label "gland of anal sac") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (carpometacarpal joint of digit 1) AnnotationAssertion(Annotation( ) "A carpometacarpal joint that connects to metacarpal 1.") AnnotationAssertion(Annotation( "WP"^^xsd:string) "In humans it connects the trapezium to the first metacarpal bone, plays an irreplaceable role in the normal functioning of the thumb. The most important joint connecting the wrist to the metacarpus, osteoarthritis of the TMC is a severely disabling condition; up to twenty times more common among old women than in average") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:35421") AnnotationAssertion(Annotation( ) Annotation( ) "carpometacarpal joint of digit I") AnnotationAssertion(Annotation( "FMA:35421") "carpometacarpal joint of pollex") AnnotationAssertion(Annotation( "FMA:35421") "carpometacarpal joint of thumb") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "TMJ") AnnotationAssertion(Annotation( ) "carpometacarpal joint of the thumb") AnnotationAssertion(Annotation( ) "trapeziometacarpal joint") AnnotationAssertion( "UBERON:0011265") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "carpometacarpal joint of digit 1") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete tendon of auricularis superior) AnnotationAssertion( "FMA:53843") AnnotationAssertion(Annotation( "FMA:53843") "auricularis superior tendon") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011266") AnnotationAssertion(rdfs:comment "Made obsolete as the ear muscle inserts into cartilage and aponeurosis without any intervening tendon") AnnotationAssertion(rdfs:label "obsolete tendon of auricularis superior") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (dorsal trunk) AnnotationAssertion(Annotation( ) Annotation( "UBERONREF:0000006") "The part of the trunk that is in the dorsum[cjm].") AnnotationAssertion( "In humans, the subdivision of trunk which is demarcated from the trunk proper by the external surface of the posterolateral part of the rib cage, the anterior surface of the thoracic vertebral column and the posterior axillary lines, the external surface of the posterior abdominal wall; together with the trunk proper, it constitutes the trunk[FMA]") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:35162") AnnotationAssertion( "FMA:25056") AnnotationAssertion( "MA:0000020") AnnotationAssertion(Annotation( "FMA:25056") "back of trunk") AnnotationAssertion( "dorsal part of trunk") AnnotationAssertion(Annotation( "FMA:25056") "dorsum of trunk") AnnotationAssertion(Annotation( "FMA:25056") "trunk back") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011270") AnnotationAssertion(rdfs:label "dorsal trunk") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (caudal-sacral region of vertebral column) AnnotationAssertion(Annotation( "UBERONREF:0000006") "Subdivision of vertebral column that is posterior to the sacral region and anterior to the caudal region.") AnnotationAssertion( "Definition to be reviewed for generality across tetrapods. Typically we regard the caudal region as immediately following the sacral region, with the caudal (tail) region defined as post-anal.") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0000080") Annotation( "AAO"^^xsd:string) Annotation( "AAO:Duellman_and_Treub_1994") "Region of the vertebral column posterior to the sacrum consisting of two to four vertebrae. The last of these vertebrae is distinguished by the possession of a well-developed haemal arch; it supports the posterior part of the cloaca and marks the posterior limit of the trunk.[AAO]") AnnotationAssertion( "AAO:0000080") AnnotationAssertion( "caudal-sacral vertebrae series") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "cloacal vertebrae series") AnnotationAssertion( "UBERON:0011271") AnnotationAssertion(rdfs:label "caudal-sacral region of vertebral column") SubClassOf( ) # Class: (embryonic skin basal layer) AnnotationAssertion( "compare with 'stratum basale of epidermis'. This class is the source for many adult structures - see WP2062. See also: 'enveloping layer of ectoderm'") AnnotationAssertion( "EHDAA2:0001845") AnnotationAssertion( "uberon") AnnotationAssertion( "basal cell layer of skin") AnnotationAssertion(Annotation( "Wikipathways:WP2062") "outer epithelium of body") AnnotationAssertion( "UBERON:0011272") AnnotationAssertion(rdfs:label "embryonic skin basal layer") SubClassOf(Annotation( "EHDAA2"^^xsd:string) ) SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (nail of manual digit 1) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A nail that is part of a manual digit 1.") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:18734") AnnotationAssertion( "FMA:54329") AnnotationAssertion(Annotation( "EMAPA:18734") "claw of digit 1 of fore-paw") AnnotationAssertion(Annotation( ) Annotation( ) "nail of manual digit I") AnnotationAssertion(Annotation( "FMA:54329") "nail of thumb") AnnotationAssertion(Annotation( "FMA:54329") "nail plate of thumb") AnnotationAssertion(Annotation( "FMA:54329") "thumb nail") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011273") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "nail of manual digit 1") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (nail of manual digit 2) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A nail that is part of a manual digit 2.") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:18735") AnnotationAssertion( "FMA:54332") AnnotationAssertion(Annotation( "EMAPA:18735") "claw of digit 2 of fore-paw") AnnotationAssertion(Annotation( "FMA:54332") "index finger nail") AnnotationAssertion(Annotation( "FMA:54332") "nail of index finger") AnnotationAssertion(Annotation( ) Annotation( ) "nail of manual digit II") AnnotationAssertion(Annotation( "FMA:54332") "nail of second finger") AnnotationAssertion(Annotation( "FMA:54332") "nail plate of index finger") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011274") AnnotationAssertion(rdfs:label "nail of manual digit 2") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (nail of manual digit 3) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A nail that is part of a manual digit 3.") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:18736") AnnotationAssertion( "FMA:54335") AnnotationAssertion(Annotation( "EMAPA:18736") "claw of digit 3 of fore-paw") AnnotationAssertion(Annotation( "FMA:54335") "middle finger nail") AnnotationAssertion(Annotation( ) Annotation( ) "nail of manual digit III") AnnotationAssertion(Annotation( "FMA:54335") "nail of middle finger") AnnotationAssertion(Annotation( "FMA:54335") "nail of third finger") AnnotationAssertion(Annotation( "FMA:54335") "nail plate of middle finger") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011275") AnnotationAssertion(rdfs:label "nail of manual digit 3") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (nail of manual digit 4) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A nail that is part of a manual digit 4.") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:18737") AnnotationAssertion( "FMA:54338") AnnotationAssertion(Annotation( "EMAPA:18737") "claw of digit 4 of fore-paw") AnnotationAssertion(Annotation( "FMA:54338") "nail of fourth finger") AnnotationAssertion(Annotation( ) Annotation( ) "nail of manual digit IV") AnnotationAssertion(Annotation( "FMA:54338") "nail of ring finger") AnnotationAssertion(Annotation( "FMA:54338") "nail plate of ring finger") AnnotationAssertion(Annotation( "FMA:54338") "ring finger nail") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011276") AnnotationAssertion(rdfs:label "nail of manual digit 4") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (nail of manual digit 5) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A nail that is part of a manual digit 5.") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:18738") AnnotationAssertion( "FMA:54341") AnnotationAssertion(Annotation( "EMAPA:18738") "claw of digit 5 of fore-paw") AnnotationAssertion(Annotation( "FMA:54341") "little finger nail") AnnotationAssertion(Annotation( "FMA:54341") "nail of fifth finger") AnnotationAssertion(Annotation( ) Annotation( ) "nail of manual digit V") AnnotationAssertion(Annotation( "FMA:54341") "nail plate of little finger") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:54341") "nail of little finger") AnnotationAssertion( "UBERON:0011277") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "nail of manual digit 5") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (nail of pedal digit 1) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A nail that is part of a pedal digit 1.") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:18739") AnnotationAssertion( "FMA:54344") AnnotationAssertion(Annotation( "FMA:54344") "big toe nail") AnnotationAssertion(Annotation( "EMAPA:18739") "claw of digit 1 of hind-paw") AnnotationAssertion(Annotation( "FMA:54344") "nail of big toe") AnnotationAssertion(Annotation( "FMA:54344") "nail of great toe") AnnotationAssertion(Annotation( ) Annotation( ) "nail of pedal digit I") AnnotationAssertion(Annotation( "FMA:54344") "nail plate of big toe") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:54344") "nail of first toe") AnnotationAssertion( "UBERON:0011278") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "nail of pedal digit 1") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (nail of pedal digit 2) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A nail that is part of a pedal digit 2.") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:18740") AnnotationAssertion( "FMA:54347") AnnotationAssertion(Annotation( "EMAPA:18740") "claw of digit 2 of hind-paw") AnnotationAssertion(Annotation( ) Annotation( ) "nail of pedal digit II") AnnotationAssertion(Annotation( "FMA:54347") "nail of second toe") AnnotationAssertion(Annotation( "FMA:54347") "nail plate of second toe") AnnotationAssertion(Annotation( "FMA:54347") "second toe nail") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011279") AnnotationAssertion(rdfs:label "nail of pedal digit 2") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (nail of pedal digit 3) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A nail that is part of a pedal digit 3.") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:18741") AnnotationAssertion( "FMA:54350") AnnotationAssertion(Annotation( "EMAPA:18741") "claw of digit 3 of hind-paw") AnnotationAssertion(Annotation( ) Annotation( ) "nail of pedal digit III") AnnotationAssertion(Annotation( "FMA:54350") "nail of third toe") AnnotationAssertion(Annotation( "FMA:54350") "nail plate of third toe") AnnotationAssertion(Annotation( "FMA:54350") "third toe nail") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011280") AnnotationAssertion(rdfs:label "nail of pedal digit 3") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (nail of pedal digit 4) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A nail that is part of a pedal digit 4.") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:18742") AnnotationAssertion( "FMA:54353") AnnotationAssertion(Annotation( "EMAPA:18742") "claw of digit 4 of hind-paw") AnnotationAssertion(Annotation( "FMA:54353") "fourth toe nail") AnnotationAssertion(Annotation( "FMA:54353") "nail of fourth toe") AnnotationAssertion(Annotation( ) Annotation( ) "nail of pedal digit IV") AnnotationAssertion(Annotation( "FMA:54353") "nail plate of fourth toe") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011281") AnnotationAssertion(rdfs:label "nail of pedal digit 4") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (nail of pedal digit 5) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A nail that is part of a pedal digit 5.") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:18743") AnnotationAssertion( "FMA:54356") AnnotationAssertion(Annotation( "EMAPA:18743") "claw of digit 5 of hind-paw") AnnotationAssertion(Annotation( "FMA:54356") "little toe nail") AnnotationAssertion(Annotation( "FMA:54356") "nail of fifth toe") AnnotationAssertion(Annotation( "FMA:54356") "nail of little toe") AnnotationAssertion(Annotation( ) Annotation( ) "nail of pedal digit V") AnnotationAssertion(Annotation( "FMA:54356") "nail plate of little toe") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011282") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "nail of pedal digit 5") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (epoophoron) AnnotationAssertion(Annotation( ) "A remnant of the Mesonephric duct that can be found next to the ovary and fallopian tube.") AnnotationAssertion( ) AnnotationAssertion( "FMA:18691") AnnotationAssertion(Annotation( "FMA:18691") "organ of Rosenmuller") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "epooephoron") AnnotationAssertion(Annotation( ) "epoöphoron") AnnotationAssertion(Annotation( ) "organ of Rosenmüller") AnnotationAssertion(Annotation( ) "organ of rosenmueller") AnnotationAssertion(Annotation( ) "organ of rosenmuller") AnnotationAssertion(Annotation( ) "parovarium") AnnotationAssertion( "UBERON:0011283") AnnotationAssertion(rdfs:label "epoophoron") SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "Wikipedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "Wikipedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (pharyngobasilar fascia) AnnotationAssertion(Annotation( ) "The pharyngeal aponeurosis (or pharyngobasilar fascia, or fibrous coat), is situated between the mucous and muscular layers. It is thick above where the muscular fibers are wanting, and is firmly connected to the basilar portion of the occipital and the petrous portions of the temporal bones. As it descends it diminishes in thickness, and is gradually lost. It is strengthened posteriorly by a strong fibrous band, which is attached above to the pharyngeal spine on the under surface of the basilar portion of the occipital bone, and passes downward, forming a median raphe, which gives attachment to the Constrictores pharyngis.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:55074") AnnotationAssertion(Annotation( "FMA:55074") "pharyngeal aponeurosis") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "pharyngeal aponeurosis") AnnotationAssertion( "UBERON:0011289") AnnotationAssertion(rdfs:label "pharyngobasilar fascia") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (submucosa of uterine tube) AnnotationAssertion(Annotation( "BTO:0002116") "The submucous layer of the wall of the uterine tube.") AnnotationAssertion( ) AnnotationAssertion( "BTO:0002116") AnnotationAssertion( "submucosa of fallopian tube") AnnotationAssertion(Annotation( "BTO:0002116") Annotation( ) "tela submucosa tubae uterinae") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0002116") "submucous layer of uterine tube") AnnotationAssertion( "uterine submucosa") AnnotationAssertion( "UBERON:0011298") AnnotationAssertion(rdfs:label "submucosa of uterine tube") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (white matter of telencephalon) AnnotationAssertion(Annotation( ) "A partion of white matter that is part of a telencephalon. This can be further subdivided in some species, for example, into hemisphere white matter and the corpus callosum.") AnnotationAssertion(Annotation( "ZFA:0000597") "CNS white matter that is part of the telencephalon[ZFA:0000597].") AnnotationAssertion( "UBERON:0013202") AnnotationAssertion( "UBERON:0022550") AnnotationAssertion( "BIRNLEX:1075") AnnotationAssertion( "FMA:83930") AnnotationAssertion( "HBA:9219") AnnotationAssertion( "HBA:9230") AnnotationAssertion( "TAO:0000597") AnnotationAssertion( "ZFA:0000597") AnnotationAssertion(Annotation( "BIRNLEX:1075") "predominantly white regional part of telencephalon") AnnotationAssertion(Annotation( "ZFA:0000597") "telencephalic tract/commissure") AnnotationAssertion(Annotation( "HBA:TELWM") "telencephalic white matter") AnnotationAssertion(Annotation( "TAO:0000597") "telencephalic tracts") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011299") AnnotationAssertion(rdfs:label "white matter of telencephalon") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (gray matter of telencephalon) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A portion of gray matter that is part of a telencephalon.") AnnotationAssertion( "UBERON:0024186") AnnotationAssertion( "BIRNLEX:1067") AnnotationAssertion( "FMA:83911") AnnotationAssertion(Annotation( "BIRNLEX:1067") "predominantly gray regional part of telencephalon") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011300") AnnotationAssertion(rdfs:label "gray matter of telencephalon") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (manubrium sternum pre-cartilage condensation) AnnotationAssertion( "EHDAA2:0001063") AnnotationAssertion( "EHDAA:9563") AnnotationAssertion(Annotation( "EHDAA2:0001063") "manubrium sterni pre-cartilage condensation") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011301") AnnotationAssertion(rdfs:label "manubrium sternum pre-cartilage condensation") SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (superficial part of temporalis) AnnotationAssertion(Annotation( "MFMO:0000087") "The superficial temporalis muscle is a separable part of the temporalis muscle that attaches to the temporalis fascia.") AnnotationAssertion( "MFMO:0000087") AnnotationAssertion(Annotation( "MFMO:0000087") "anterior temporal") AnnotationAssertion(Annotation( "MFMO:0000087") "temporal muscle anterolateral part") AnnotationAssertion(Annotation( "MFMO:0000087") "temporales") AnnotationAssertion(Annotation( "MFMO:0000087") "temporalis anterior head") AnnotationAssertion(Annotation( "MFMO:0000087") "temporalis pars anterior") AnnotationAssertion(Annotation( "MFMO:0000087") "temporalis pars superficialis") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011305") AnnotationAssertion(rdfs:label "superficial part of temporalis") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "MFMO") ObjectSomeValuesFrom( )) DisjointClasses(Annotation( "lexical"^^xsd:string) ) # Class: (deep part of temporalis) AnnotationAssertion(Annotation( "MFMO:0000086") "The deep temporalis muscle is a separable part of the temporalis muscle that that attaches to the bony wall of the braincase and is deep to the superficial temporalis.") AnnotationAssertion( "MFMO:0000086") AnnotationAssertion(Annotation( "MFMO:0000086") "medial temporal") AnnotationAssertion(Annotation( "MFMO:0000086") "posterior temporal") AnnotationAssertion(Annotation( "MFMO:0000086") "temporal muscle posterior part") AnnotationAssertion(Annotation( "MFMO:0000086") "temporalis bbHauptmassebb") AnnotationAssertion(Annotation( "MFMO:0000086") "temporalis lamina profunda") AnnotationAssertion(Annotation( "MFMO:0000086") "temporalis pars posterior") AnnotationAssertion(Annotation( "MFMO:0000086") "temporalis pars profunda") AnnotationAssertion(Annotation( "MFMO:0000086") "temporalis posterior head") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011306") AnnotationAssertion(rdfs:label "deep part of temporalis") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (suprazygomatic part of temporalis) AnnotationAssertion(Annotation( "MFMO:0000088") "The suprazygomatic part of the temporalis muscle is a separable part of the deep temporalis that attaches to the superior surface of the temporal root of the zygomatic arch.") AnnotationAssertion( "MFMO:0000088") AnnotationAssertion(Annotation( "MFMO:0000088") "temporalis pars suprazygomatica") AnnotationAssertion(Annotation( "MFMO:0000088") "zygomatic temporalis") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011307") AnnotationAssertion(rdfs:label "suprazygomatic part of temporalis") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "FEED"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (pars reflexa of masseter) AnnotationAssertion(Annotation( "FEED:FEED"^^xsd:string) "The pars reflexa is a separable part of the superficial masseter muscle that attaches to the medial surface of the mandible.") AnnotationAssertion(Annotation( "2012-07-02"^^xsd:string) Annotation( "FEED"^^xsd:string) Annotation( "http://www.feedexp.org"^^xsd:string) "The pars reflexa is a separable part of the superficial masseter muscle that attaches to the medial surface of the mandible.[FEED]") AnnotationAssertion(Annotation( "FEED:FEED"^^xsd:string) "pars reflexa") AnnotationAssertion(Annotation( "FEED:FEED"^^xsd:string) "masseter, pars reflexa") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011308") AnnotationAssertion(rdfs:label "pars reflexa of masseter") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (body of mandible) AnnotationAssertion(Annotation( ) "The zone of the mandible that carries the teeth.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:52827") AnnotationAssertion(Annotation( ) Annotation( ) "corpus mandibulae") AnnotationAssertion(Annotation( "FMA:52827") "mandibular body") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "body of the mandible") AnnotationAssertion( "UBERON:0011309") AnnotationAssertion(rdfs:label "body of mandible") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (masseteric fossa) AnnotationAssertion(Annotation( ) ".The fossa for the masseter. In some therapsids, the coronoid process of the dentary bears a large external depression which accommodates the masseter -- an important muscle in closing and in grinding motions of the jaw.") AnnotationAssertion(Annotation( "2012-07-02"^^xsd:string) Annotation( "FEED"^^xsd:string) Annotation( "http://www.feedexp.org"^^xsd:string) "fossa on the lateral surface of the mandible, located in the superior part of the ascending process.[FEED]") AnnotationAssertion( "uberon") AnnotationAssertion( "masseteric cavity") AnnotationAssertion( "UBERON:0011310") AnnotationAssertion(rdfs:label "masseteric fossa") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (hyoepiglottic ligament) AnnotationAssertion(Annotation( ) "An elastic band connecting the anterior surface of the epiglottis to the upper border of the body of the hyoid bone.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:55227") AnnotationAssertion( "NCIT:C32751") AnnotationAssertion(Annotation( "ncithesaurus:Hyoepiglottic_Ligament") "UMLS:C0225515") AnnotationAssertion(Annotation( "FMA:55227") "hyo-epiglottic ligament") AnnotationAssertion(Annotation( ) Annotation( ) "igamentum hyoepiglotticum") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011311") AnnotationAssertion(rdfs:label "hyoepiglottic ligament") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (hyoepiglottic muscle) AnnotationAssertion( "hyo-epiglottic muscle") AnnotationAssertion( "hyoepiglotticus") AnnotationAssertion( "hyoepiglottus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011312") AnnotationAssertion(rdfs:comment "Developed in mammals other than human. EDITOR NOTE: TODO add relationship to hyoepiglottic ligament.") AnnotationAssertion(rdfs:label "hyoepiglottic muscle") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (posterior subdivision of masseter) AnnotationAssertion(Annotation( "2012-07-02"^^xsd:string) Annotation( "FEED"^^xsd:string) Annotation( "http://www.feedexp.org"^^xsd:string) "The posterior masseter is a separable part of the deep masseter muscle that attaches to the postero-ventral surface of the zygomatic arch.[FEED]") AnnotationAssertion(Annotation( "FEED:FEED"^^xsd:string) "masseter, posterior") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011313") AnnotationAssertion(rdfs:label "posterior subdivision of masseter") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses(Annotation( "lexical"^^xsd:string) ) # Class: (anterior subdivision of masseter) AnnotationAssertion(Annotation( "2012-07-02"^^xsd:string) Annotation( "FEED"^^xsd:string) Annotation( "http://www.feedexp.org"^^xsd:string) "The anterior masseter is a separable part of the masseter muscle that is attached to anterior root of zygomatic arch.[FEED]") AnnotationAssertion(Annotation( "FEED:FEED"^^xsd:string) "masseter, anterior") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011314") AnnotationAssertion(rdfs:label "anterior subdivision of masseter") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (digastric branch of facial nerve) AnnotationAssertion(Annotation( ) "The digastric branch of facial nerve arises close to the stylomastoid foramen, and divides into several filaments, which supply the posterior belly of the Digastricus; one of these filaments joins the glossopharyngeal nerve.") AnnotationAssertion(Annotation( ) "digastric branch") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:53288") AnnotationAssertion(Annotation( "FEED:FEED"^^xsd:string) "digastric branch of facial nerve (CN VII)") AnnotationAssertion( "facial nerve, digastric branch") AnnotationAssertion(Annotation( "FMA:53288") "nerve to posterior belly of digastric") AnnotationAssertion(Annotation( "FMA:53288") "ramus digastricus (nervus facialis)") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) Annotation( ) "ramus digastricus nervus facialis") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:53288") "branch of facial nerve to posterior belly of digastric") AnnotationAssertion( "UBERON:0011315") AnnotationAssertion(rdfs:label "digastric branch of facial nerve") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (nerve to stylohyoid from facial nerve) AnnotationAssertion(Annotation( ) "The stylohyoid branch of facial nerve frequently arises in conjunction with the digastric branch; it is long and slender, and enters the Stylohyoideus about its middle.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:53298") AnnotationAssertion(Annotation( "FMA:53298") "facial nerve stylohyoid branch") AnnotationAssertion(Annotation( "FMA:53298") "nerve to stylohyoid") AnnotationAssertion(Annotation( "FMA:53298") "ramus stylohyoideus") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) Annotation( ) "ramus stylohyoideus nervus facialis") AnnotationAssertion(Annotation( "FMA:53298") "stylodigastric nerve") AnnotationAssertion(Annotation( "FMA:53298") "stylohyoid branch of facial nerve") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "stylohyoid branch") AnnotationAssertion( "UBERON:0011316") AnnotationAssertion(rdfs:label "nerve to stylohyoid from facial nerve") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (nerve to stylopharyngeus from glossopharyngeal nerve) AnnotationAssertion(Annotation( ) "The stylopharyngeal branch of glossopharyngeal nerve is distributed to the Stylopharyngeus.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:53487") AnnotationAssertion(Annotation( "FMA:53487") "branch of glossopharyngeal nerve to stylopharyngeus") AnnotationAssertion(Annotation( "FMA:53487") "nerve to stylopharyngeus") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) Annotation( ) "ramus musculi stylopharyngei nervus glossopharyngei") AnnotationAssertion(Annotation( "FMA:53487") "stylopharyngeal branch of glossopharyngeal nerve") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011317") AnnotationAssertion(rdfs:label "nerve to stylopharyngeus from glossopharyngeal nerve") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (capsule of temporomandibular joint) AnnotationAssertion(Annotation( ) "The articular capsule (capsular ligament) is a thin, loose envelope, attached above to the circumference of the mandibular fossa and the articular tubercle immediately in front; below, to the neck of the condyle of the mandible.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:57050") AnnotationAssertion( "MFMO:0000046") AnnotationAssertion(Annotation( "FMA:57050") "articular capsule of temporomandibular joint") AnnotationAssertion(Annotation( ) Annotation( ) "capsula articularis articulationis temporomandibularis") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011318") AnnotationAssertion(rdfs:label "capsule of temporomandibular joint") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (disk of temporomandibular joint) AnnotationAssertion(Annotation( ) Annotation( "BTO:0003675") "The fibrocartilaginous plate that separates the joint into upper and lower cavities.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0003675") AnnotationAssertion( "FMA:57059") AnnotationAssertion( "MESH:D019224") AnnotationAssertion(Annotation( "FMA:57059") "articular disc of temporomandibular joint") AnnotationAssertion(Annotation( "FMA:57059") "articular disk of temporomandibular joint") AnnotationAssertion(Annotation( "FMA:57059") "discus articularis (articulatio temporomandibularis)") AnnotationAssertion(Annotation( ) Annotation( ) "discus articularis articulationis temporomandibularis") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) Annotation( ) "discus articularis articulationis temporomandibularis") AnnotationAssertion(Annotation( "BTO:0003675") "temporomandibular articular disk") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0003675") "articular disc of temporomandibular joint") AnnotationAssertion(Annotation( "BTO:0003675") "discus articularis temporomandibularis") AnnotationAssertion(Annotation( "BTO:0003675") "mandibular disk") AnnotationAssertion(Annotation( "GAID:273") "temporomandibular articular disk") AnnotationAssertion(Annotation( ) "temporomandibular joint disk") AnnotationAssertion( "UBERON:0011319") AnnotationAssertion(rdfs:label "disk of temporomandibular joint") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "BTO"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (ligament of temporomandibular joint) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:57070") AnnotationAssertion(Annotation( "FMA:57070") "temporomandibular joint ligament") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011320") AnnotationAssertion(rdfs:label "ligament of temporomandibular joint") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (masseteric nerve) AnnotationAssertion(Annotation( ) "A muscular branch of the mandibular nerve passing to the medial surface of the masseter muscle, which it innervates.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:53103") AnnotationAssertion(Annotation( ) Annotation( ) "nervus massetericus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011321") AnnotationAssertion(rdfs:label "masseteric nerve") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (mylohyoid nerve) AnnotationAssertion(Annotation( ) "A nerve that innervates the mylohyoid muscle and the anterior belly of the digastric muscle.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:myhy") AnnotationAssertion( "FMA:53247") AnnotationAssertion(Annotation( "FMA:53247") "branch of inferior alveolar nerve to mylohyoid") AnnotationAssertion(Annotation( "FMA:53247") "mylodigastric nerve") AnnotationAssertion(Annotation( "FMA:53247") "mylohyoid branch of inferior alveolar nerve") AnnotationAssertion(Annotation( "FMA:53247") "nerve to mylohyoid") AnnotationAssertion(Annotation( ) Annotation( ) "nervus mylohyoideus") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) Annotation( ) "nervus mylohyoideus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "nerve to mylohyoid") AnnotationAssertion( "UBERON:0011322") AnnotationAssertion(rdfs:label "mylohyoid nerve") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pharyngeal nerve plexus) AnnotationAssertion(Annotation( ) "The pharyngeal plexus is a network of nerve fibers innervating most of the palate, larynx, and pharynx. It is located on the surface of the middle pharyngeal constrictor muscle.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:82453") AnnotationAssertion(Annotation( "FMA:82453") "pharyngeal nerve plexus") AnnotationAssertion(Annotation( ) "pharyngeal plexus of vagus nerve") AnnotationAssertion(Annotation( ) Annotation( ) "plexus pharyngeus nervi vagi") AnnotationAssertion( "vagus nerve pharyngeal plexus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011325") AnnotationAssertion(rdfs:label "pharyngeal nerve plexus") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (superior laryngeal nerve) AnnotationAssertion(Annotation( ) "The superior laryngeal nerve is a branch of the vagus nerve. It arises from the middle of the ganglion nodosum and in its course receives a branch from the superior cervical ganglion of the sympathetic. It descends, by the side of the pharynx, behind the internal carotid artery, and divides into two branches: external laryngeal nerve internal laryngeal nerve A superior laryngeal nerve palsy changes the pitch of the voice and causes an inability to make explosive sounds. If no recovery is evident three months after the palsy initially presents, the damage is most likely to be permanent. A bilateral palsy presents as a tiring and hoarse voice.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:sln") AnnotationAssertion( "FMA:6239") AnnotationAssertion(Annotation( "FMA:6239") "nervus laryngealis superior") AnnotationAssertion(Annotation( ) Annotation( ) "nervus laryngeus superior") AnnotationAssertion(Annotation( "FMA:6239") "superior laryngeal branch of inferior vagal ganglion") AnnotationAssertion(Annotation( "FMA:6239") "superior laryngeal branch of vagus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011326") AnnotationAssertion(rdfs:label "superior laryngeal nerve") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "Wikipedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (deep temporal nerve) AnnotationAssertion(Annotation( ) "The deep temporal nerves, branches of the mandibular division of the trigeminal nerve, are two in number, anterior and posterior. They pass above the upper border of the pterygoideus externus and enter the deep surface of the temporalis.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:53187") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) Annotation( ) "nervi temporales profundi") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "deep temporal nerve") AnnotationAssertion( "UBERON:0011327") AnnotationAssertion(rdfs:label "deep temporal nerve") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (extrinsic tongue pre-muscle mass) AnnotationAssertion( "EMAPA:17884") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011332") AnnotationAssertion(rdfs:label "extrinsic tongue pre-muscle mass") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (surface of mandible) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An anatomical surface that is part of a mandible.") AnnotationAssertion( "FMA:57558") AnnotationAssertion(Annotation( "FMA:57558") "mandibular surface") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011342") AnnotationAssertion(rdfs:label "surface of mandible") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (medial surface of mandible) AnnotationAssertion( "FMA:59464") AnnotationAssertion(Annotation( "FMA:59464") "medial surface of ramus of mandible") AnnotationAssertion(Annotation( "FMA:59464") "medial surface of mandibular ramus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:59464") "internal surface of ramus of mandible") AnnotationAssertion( "UBERON:0011343") AnnotationAssertion(rdfs:label "medial surface of mandible") SubClassOf( ) DisjointClasses(Annotation( "lexical"^^xsd:string) ) # Class: (lateral surface of mandible) AnnotationAssertion(Annotation( "FMA:59463") "lateral surface of mandibular ramus") AnnotationAssertion( "FMA:59463") AnnotationAssertion(Annotation( "FMA:59463") "lateral surface of ramus of mandible") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:59463") "external surface of ramus of mandible") AnnotationAssertion( "UBERON:0011344") AnnotationAssertion(rdfs:label "lateral surface of mandible") SubClassOf( ) # Class: (pharyngeal raphe) AnnotationAssertion(Annotation( ) "The Pharyngeal raphe is a raphe that serves as the origin and insertion for several of the pharyngeal constrictors.") AnnotationAssertion(Annotation( "FMA"^^xsd:string) "isa anatomical line in FMA") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:55077") AnnotationAssertion(Annotation( ) "raphe pharyngis") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011345") AnnotationAssertion(rdfs:label "pharyngeal raphe") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses( ) # Class: (palatine raphe) AnnotationAssertion(Annotation( ) "A raphe running across the palate, from the palatine uvula to the incisive papilla.") AnnotationAssertion(Annotation( "FMA"^^xsd:string) "isa anatomical line in FMA") AnnotationAssertion( ) AnnotationAssertion( "FMA:75111") AnnotationAssertion(Annotation( ) "raphe palati") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011346") AnnotationAssertion(rdfs:label "palatine raphe") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (raphe of hard palate) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A palatine raphe that is part of a hard palate.") AnnotationAssertion( ) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011347") AnnotationAssertion(rdfs:label "raphe of hard palate") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (raphe of soft palate) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A palatine raphe that is part of a soft palate.") AnnotationAssertion( ) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011348") AnnotationAssertion(rdfs:label "raphe of soft palate") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pterygomandibular raphe) AnnotationAssertion(Annotation( ) "The pterygomandibular raphe (pterygomandibular ligament) is a tendinous band of the buccopharyngeal fascia, attached by one extremity to the hamulus of the medial pterygoid plate, and by the other to the posterior end of the mylohyoid line of the mandible. Its medial surface is covered by the mucous membrane of the mouth. Its lateral surface is separated from the ramus of the mandible by a quantity of adipose tissue. Its posterior border gives attachment to the superior pharyngeal constrictor muscle. Its anterior border attaches to the posterior edge of the buccinator.") AnnotationAssertion(Annotation( "FMA"^^xsd:string) "isa anatomical line in FMA") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:55618") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "pterygomandibular ligament") AnnotationAssertion(Annotation( ) "pterygomandibular raph%c3%a9") AnnotationAssertion( "UBERON:0011349") AnnotationAssertion(rdfs:label "pterygomandibular raphe") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (mylohyoid raphe) AnnotationAssertion( "uberon") AnnotationAssertion( "raphe of the mylohyoid") AnnotationAssertion( "UBERON:0011350") AnnotationAssertion(rdfs:label "mylohyoid raphe") SubClassOf( ) # Class: (Reissner's fiber) AnnotationAssertion(Annotation( ) Annotation( "ISBN:0471888893"^^xsd:string) "An acellular strand that runs from subcommissural organ caudally through the ventricular system and central canal to the ampulla caudalis. Develops from glycoproteins secreted into CSF.") AnnotationAssertion(Annotation( "ISBN:0471888893"^^xsd:string) ) AnnotationAssertion( "Reissner's fiber is present in the central canal of species in all chordate subphyla[Olsson R. (1993) Reissner's fiber mechanisms: some common denominators. In The Subcommissural Organ: An Ependymal Brain Gland ]") AnnotationAssertion( ) AnnotationAssertion( "NLX:151878") AnnotationAssertion( "Reissner's fibre") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011357") AnnotationAssertion(rdfs:label "Reissner's fiber") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (infundibular organ) AnnotationAssertion(Annotation( ) Annotation( "larval") ) AnnotationAssertion( "infundibular organ of Boeke") AnnotationAssertion( "ventral infundibular organ") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011358") AnnotationAssertion(rdfs:comment "Resembles the subcommisural organ structurally, ultrastructurally and immunochemically[Niewenhuys] Gives rise to Reissner's fiber; however secretions are not identical to those of SCO [PMID:9550137][DOI:10.1007/BF00303086]") AnnotationAssertion(rdfs:label "infundibular organ") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (ampulla caudalis) AnnotationAssertion(Annotation( "ISBN:0471888893"^^xsd:string) "A ventricle-like space at the end of the central canal.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011360") AnnotationAssertion(rdfs:label "ampulla caudalis") SubClassOf( ) SubClassOf(Annotation( "in caudal end of") ObjectSomeValuesFrom( )) # Class: (cranial blood vasculature) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A blood vasculature that is part of a head.") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0005297") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "Blood vessel part of cranial vasculature.[TAO]") AnnotationAssertion( "TAO:0005297") AnnotationAssertion( "ZFA:0005297") AnnotationAssertion(Annotation( "ZFA:0005297") "cranial blood vessel") AnnotationAssertion( "set of blood vessels of head") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "TAO:0005297") Annotation( ) "cranial blood vessels") AnnotationAssertion( "UBERON:0011362") AnnotationAssertion(rdfs:label "cranial blood vasculature") SubClassOf( ) SubClassOf( ) # Class: (cranial lymph vasculature) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A lymph vasculature that is part of a head.") AnnotationAssertion( "FMA:224562") AnnotationAssertion( "TAO:0005298") AnnotationAssertion( "ZFA:0005298") AnnotationAssertion(Annotation( "ZFA:0005298") "cranial lymph vessel") AnnotationAssertion(Annotation( "UBERON:cjm"^^xsd:string) "cranial lymphatics") AnnotationAssertion(Annotation( "FMA:224562") "set of lymphatic vessels of head") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "TAO:0005298") Annotation( ) "cranial lymph vessels") AnnotationAssertion(Annotation( "FMA:224562") "set of cranial lymphatic vessels") AnnotationAssertion( "UBERON:0011363") AnnotationAssertion(rdfs:label "cranial lymph vasculature") SubClassOf( ) SubClassOf( ) # Class: (cleidocephalicus muscle) AnnotationAssertion(Annotation( "MURDOCH:379") "The cleidomastoideus is a thick, strap-like muscle that together with the cleidocervicalis forms the proximal part of the brachiocephalicus. It lies beneath the cleidocervicalis. Its origin is the clavicular tendon with its insertion being at the mastoid process of the temporal bone. It is distinctly narrow and is united with the cleidocervicalis and cleidobrachialis by the clavicular tendon. Together with the other two components of the brachiocephalicus muscle, its primary function is to advance the free limb, however, it can also act as an shoulder extensor. Acting bilaterally, it fixes and depresses the neck, while by its unilateral action, it allows the head and neck to be drawn to the side. Its blood supply is the inferior cervical, carotid and vertebral arteries and its nerve supply is the spinal accessory, cervical and axillary nerves.") AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37687") AnnotationAssertion( "MA:0002275") AnnotationAssertion( "NCIT:C52893") AnnotationAssertion(Annotation( "ncithesaurus:Cleidocephalic") "UMLS:C1707412") AnnotationAssertion(Annotation( "MA:0002275") "cleidocephalic") AnnotationAssertion( "cleidocephalic muscle") AnnotationAssertion( "cleidocephalicus") AnnotationAssertion( "uberon") AnnotationAssertion( "cleidomastoid") AnnotationAssertion( "cleidomastoid muscle") AnnotationAssertion( "cleidomastoideus") AnnotationAssertion( "pars mastoideus") AnnotationAssertion( "UBERON:0011364") AnnotationAssertion(rdfs:comment "alt def: \"Combination of cleidomastoid and cleidocervical muscles\"") AnnotationAssertion(rdfs:label "cleidocephalicus muscle") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (cleidobrachialis muscle) AnnotationAssertion(Annotation( "MURDOCH:376") "This muscle makes up the distal segment of the brachiocephalicus. It originates at the clavicular tendon but functionally, from the head and neck through the cleidocervicalis. It inserts at the distal end of the cranial border of the humerus, where it lies between the biceps brachii medially and the brachialis laterally. The muscle partly covers the pectoral muscles at their insertions. In conjunction with the cleidocervicalis, it advances the limb, extends the shoulder and causes lateral movement of the head and neck.") AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37686") AnnotationAssertion( "MA:0002274") AnnotationAssertion( "NCIT:C52892") AnnotationAssertion(Annotation( "ncithesaurus:Cleidobrachial") "UMLS:C1707411") AnnotationAssertion(Annotation( "MA:0002274") "cleidobrachial") AnnotationAssertion( "cleidobrachial muscle") AnnotationAssertion( "cleidobrachialis") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011366") AnnotationAssertion(rdfs:label "cleidobrachialis muscle") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (brachiocephalic muscle) AnnotationAssertion(Annotation( ) "The brachiocephalicus is a long and flat, complex of muscles that extends from the lower half of the humeral shaft to the head and neck. The muscle divides into two parts at the clavicular intersection. This is also the point of origin for all the muscles that make up the brachiocephalicus. This point is situated just cranial to the shoulder. The two main sections are the cleidobrachialis which is distal to the clavicular intersection and the cleidocephalicus which extends proximally to the clavivular intersection. The cleidocephalicus can also be divided into the pars cervicalis, which inserts on the broad aponeurosis, over the fibrous raphe of the cranial half of the neck. The other part, the pars mastoideus inserts on the mastoid process of the temporal bone via a strong tendon. The cleidobrachialis extends distally from the clavicular intersection and inserts on the cranial edge of the distal half of the humerus. The tendon that inserts the cleidobrachialis lies between the brachialis muscle and the biceps brachii. As a result of the brachiocephalicus spanning a large region it has the ability to provide a number of actions. These include extending the shoulder joint, protracts the limb, provides lateral movement of the head and allows the neck to be depressed.") AnnotationAssertion( "brachiocephalicus") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37685") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011368") AnnotationAssertion(rdfs:comment "The brachiocephalicus is more complex than other muscles of the forelimb. It consists of 2 elements that unite at the clavicle in dogs. In dogs the caudal part, known as the cleidobrachialis, runs from the clavicle to the humerus and is closely associated with the deltoid. The cranial portion runs from the clavicle to various attachments via a broad aponeurosis on the upper part of the head and neck. It is called the cleidomastoideus in the dog because it inserts on the mastoid process of the temporal bone. It may have a different name, like cleido-occipitalis, in other mammals. The name brachiocephalicus signifies that this complex of muscles runs from the upper arm to the head and does not specify the details of muscle attachments because these vary so much from species to species. The brachiocephalicus advances the limb and may also extend the shoulder joint, but this depends on the cranial attachment being fixed and the limb being free to move. However, when the forelimb is firmly on the ground and the head is free to move, it forces the head and neck either ventrally or to one side depending on whether or not both muscles act in tandem") AnnotationAssertion(rdfs:label "brachiocephalic muscle") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (omotransversarius muscle) AnnotationAssertion(Annotation( "MURDOCH:1433") "The omotransversarius is a straplike muscle, which advances and adducts the forelimb, as well as flexes the neck laterally. It covers the transverse processes of the cervical vertebrae, lying to their side. The omotransversarius lies ventral to the trapezius, cranial to the deltoid muscle and is covered cranially by the cleidocervicalis. It extends from the atlas to the spine of the scapula, with its origin on the transverse process of the atlas and its insertion in the distal end of the spine of the scapula. Its name can be split into omo, which is Greek for shoulder, and tranversarius which relates to its attachment to the transverse process of the atlas. This muscle is innervated by the accessory nerve.") AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37690") AnnotationAssertion( "MA:0002349") AnnotationAssertion( "NCIT:C52972") AnnotationAssertion(Annotation( "ncithesaurus:Omotransverse") "UMLS:C1709311") AnnotationAssertion(Annotation( "MA:0002349") "omotransverse") AnnotationAssertion( "omotransverse muscle") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011369") AnnotationAssertion(rdfs:label "omotransversarius muscle") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (transverse process of atlas) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A transverse process of vertebra that is part of a vertebral bone 1.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:23981") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011370") AnnotationAssertion(rdfs:label "transverse process of atlas") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA-abduced-lr"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (sternocephalicus muscle) AnnotationAssertion(Annotation( "MURDOCH:1749") "The sternocephalicus is a flat muscle and its caudal border is adjacent to the ventral border of the brachiocephalicus. The lateral aspect of this muscle is crossed obliquely by the external jugular vein. It originates as a unit on the first sternebrae. The cranial portion of the muscle divides into two separate sections with different insertion points. These are the sternomastoideus and the sterno-occipitalis. The ventral portion, the sternomastiodeus is the stronger and main continuation of the sternocephalicus, which inserts on the mastoid part of the temporal bone. The thin but wide dorsal segment, the sterno-occipitalis attaches to the dorsal nuchal crest by a thin aponeurosis. The main action provided by the sternocephalicus is movement of the head and neck to the side. Ventral branches of the cervical nerves are attached to this muscle.") AnnotationAssertion( ) AnnotationAssertion( "NCIT:C117980") AnnotationAssertion( "sternocephalicus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011371") AnnotationAssertion(rdfs:label "sternocephalicus muscle") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "nuchal crest") ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (prepuce) AnnotationAssertion(Annotation( ) "A retractable double-layered fold of skin and mucous membrane that covers the glans penis or clitoris. Glands may also be present.") AnnotationAssertion( "this is a generic sex-neutral grouping class for the male and female prepuce. Note that this structure is a combination of skin and other tissue") AnnotationAssertion( "preputial") AnnotationAssertion( "NCIT:C12323") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011374") AnnotationAssertion(rdfs:label "prepuce") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (skin of prepuce of clitoris) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A zone of skin that is part of a prepuce of clitoris.") AnnotationAssertion( ) AnnotationAssertion( "FMA:27886") AnnotationAssertion(Annotation( "FMA:27886") "preputial skin of clitoris") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011375") AnnotationAssertion(rdfs:label "skin of prepuce of clitoris") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (iliothoracic muscle) AnnotationAssertion(Annotation( ) "The iliothoracic group is made up of the abdominal wall muscles: rectus abdominis, external abdominal oblique, internal abdominal obliquus, and the transversus abdominis.") AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37605") AnnotationAssertion( "MA:0002322") AnnotationAssertion( "NCIT:C52944") AnnotationAssertion(Annotation( "ncithesaurus:Iliothoracic") "UMLS:C1708463") AnnotationAssertion(Annotation( "MA:0002322") "iliothoracic") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011376") AnnotationAssertion(rdfs:label "iliothoracic muscle") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (femorothoracic muscle) AnnotationAssertion(Annotation( ) "The femorospinal group is made up of the psoas major and iliacus muscles.") AnnotationAssertion(Annotation( "MA:0002322") "femorothoracic") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011377") AnnotationAssertion(rdfs:label "femorothoracic muscle") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (male external urethral sphincter) AnnotationAssertion(Annotation( ) "The external sphincter muscle of urethra (or sphincter urethrae membranaceae) surrounds the whole length of the membranous portion of the urethra, and is enclosed in the fasciæ of the urogenital diaphragm. They arch across the front of the urethra and bulbourethral glands, pass around the urethra, and behind it unite with the muscle of the opposite side, by means of a tendinous raphé.") AnnotationAssertion(Annotation( "MA"^^xsd:string) "MA includes a term bulboglandular - some sources claim this as the muscles that are associated with the bulbourethral gland, so we place this here") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:19733") AnnotationAssertion( "MA:0002273") AnnotationAssertion( "NCIT:C52891") AnnotationAssertion(Annotation( "ncithesaurus:Bulboglandular") "UMLS:C1707060") AnnotationAssertion(Annotation( "FMA:19733") "external urethral sphincter of male urethra") AnnotationAssertion(Annotation( "FMA:19733") "male sphincter urethrae") AnnotationAssertion(Annotation( "FMA:19733") "male sphincter urethrae muscle") AnnotationAssertion(Annotation( "FMA:19733") "male urethral sphincter muscle") AnnotationAssertion(Annotation( "FMA:19733") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "musculus sphincter urethrae externus (urethra masculina)") AnnotationAssertion(Annotation( ) Annotation( ) "musculus sphincter urethrae externus urethrae masculinae") AnnotationAssertion(Annotation( ) Annotation( ) "musculus sphincter urethrae membranaceae") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "MA:0002273") "bulboglandular") AnnotationAssertion( "bulboglandular muscle") AnnotationAssertion( "UBERON:0011379") AnnotationAssertion(rdfs:label "male external urethral sphincter") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (female external urethral sphincter) AnnotationAssertion(Annotation( ) "The external sphincter muscle of female urethra is a muscle which controls urination.") AnnotationAssertion( ) AnnotationAssertion( "FMA:19778") AnnotationAssertion( "external urethral sphincter of female urethra") AnnotationAssertion(Annotation( "FMA:19778") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "musculus sphincter urethrae externus (urethra feminina)") AnnotationAssertion(Annotation( ) Annotation( ) "musculus sphincter urethrae externus urethrae femininae") AnnotationAssertion(Annotation( "FMA:19778") "outer muscle layer of female urethra") AnnotationAssertion(Annotation( "FMA:19778") "rhabdosphincter of female urethra") AnnotationAssertion(Annotation( "FMA:19778") "striated muscle layer of female urethra") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "compressor urethrae") AnnotationAssertion(Annotation( ) Annotation( ) "sphincter urethrovaginalis") AnnotationAssertion(Annotation( ) Annotation( ) "urethrovaginal sphincter") AnnotationAssertion( "UBERON:0011380") AnnotationAssertion(rdfs:label "female external urethral sphincter") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (inferior pancreaticoduodenal vein) AnnotationAssertion(Annotation( "ncithesaurus:Inferior_Pancreatico-Duodenal_Vein") "A blood vessel running parallel to the inferior pancreatico-duodenal artery that drains blood from the pancreas and duodenum into the splenic vein.") AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37616") AnnotationAssertion( "MA:0002191") AnnotationAssertion( "NCIT:C52692") AnnotationAssertion(Annotation( "ncithesaurus:Inferior_Pancreatico-Duodenal_Vein") "UMLS:C1711328") AnnotationAssertion(Annotation( "MA:0002191") "inferior pancreatico-duodenal vein") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011383") AnnotationAssertion(rdfs:label "inferior pancreaticoduodenal vein") SubClassOf( ) # Class: (superior pancreaticoduodenal vein) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37194") AnnotationAssertion( "MA:0002192") AnnotationAssertion(Annotation( "MA:0002192") "superior pancreatico-duodenal vein") AnnotationAssertion( "vena pancreaticoduodenalis superior") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011384") AnnotationAssertion(rdfs:label "superior pancreaticoduodenal vein") SubClassOf( ) # Class: (parotidoauricular muscle) AnnotationAssertion(Annotation( "MURDOCH:1519") "Is one of the numerus muscles of the external ear and is of importance since it is encountered in the operation for drainage of infections of the external ear of the dog. As its name suggests, it arises from the fascia over the parotid gland and approaches the auricle from the ventrolateral direction. This muscle is supplied by the facial nerve.The muscles of the external ear with their scattered origins and precisely located insertions provide for displacement and rotation of the ear in all directions. These muscles also have a collective function in communication both within and between species.") AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37692") AnnotationAssertion( "MA:0002352") AnnotationAssertion( "NCIT:C52976") AnnotationAssertion(Annotation( "ncithesaurus:Parotidoauricular") "UMLS:C1709470") AnnotationAssertion(Annotation( "MA:0002352") "parotidoauricular") AnnotationAssertion( "parotidoauricularis") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011385") AnnotationAssertion(rdfs:label "parotidoauricular muscle") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (facial modiolus) AnnotationAssertion(Annotation( ) "A chiasma of facial muscles held together by fibrous tissue, located lateral and slightly superior to each angle of the mouth. It is important in moving the mouth, facial expression and in dentistry. It derives its motor nerve supply from the facial nerve, and its blood supply from labial branches of the facial artery. It is contributed to by the following muscles: orbicularis oris, buccinator, levator anguli oris, depressor anguli oris, zygomaticus major, risorius quadratus labii superioris, quadratus labii inferioris.") AnnotationAssertion(Annotation( "MFMO:0000057") "modiolus") AnnotationAssertion( ) AnnotationAssertion( "FMA:46837") AnnotationAssertion( "MFMO:0000057") AnnotationAssertion(Annotation( "FMA:46837") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "modiolus anguli oris") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011386") AnnotationAssertion(rdfs:label "facial modiolus") AnnotationAssertion(rdfs:seeAlso "https://github.com/obophenotype/uberon/issues/471"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (constrictor vulvae muscle) AnnotationAssertion(Annotation( ) "The constrictor muscle of the labia is weakly developed in the female dog which blends dorsally with the external anal sphincter muscle and attaches to the coccygeal fascia at the level of the first and second coccygeal vertebrae. It encircles the vulva and vestibule for a distance of about 1 cm. caudal to the area where the urethra enters the vestibule. Its action is to lift the labia dorsally to facilitate intromission of the penis into the vagina. The constrictor vestibuli and vulvae are homologous to the bulbospogiosus (bulbocavernosus) muscle in the male.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37483") AnnotationAssertion( "MA:0002281") AnnotationAssertion( "NCIT:C52898") AnnotationAssertion(Annotation( "ncithesaurus:Constrictor_Vulvae") "UMLS:C1707495") AnnotationAssertion(Annotation( "MA:0002281") "constrictor vulvae") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "sphincter vaginae") AnnotationAssertion( "UBERON:0011387") AnnotationAssertion(rdfs:label "constrictor vulvae muscle") SubClassOf(Annotation( "unvetted") ) # Class: (male bulbospongiosus muscle) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A bulbospongiosus muscle that is part of a male reproductive system.") AnnotationAssertion( ) AnnotationAssertion( "bulbospongiosus of male") AnnotationAssertion( "male bulbospongiosus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011388") AnnotationAssertion(rdfs:label "male bulbospongiosus muscle") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/d/d7/Bulbospongiosus-Male.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (bulbospongiosus muscle) AnnotationAssertion(Annotation( ) Annotation( "MURDOCH:245") "The bulbospongiosus is the thick extrapelvic continuation of the urethralis. It originates from the perineal body (and midline raphe over corpus spongiosum in male) and inserts at the superficial perineal membrane and dorsal penile or clitoral aponeurosis. In males, the bulbospongiosus muscles are united and surround the base of the penis. They aid in emptying of urine and ejaculate from urethra. In females, these muscles are separated in the middle by the vagina and act to constrict the vaginal introitus. They can also stop the flow of blood into veins, which maintains an erection in the penis of the male and the clitoris of the female. Its nerve connection is the perineal branch of the pudendal nerve (S2, 3, 4).") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37454") AnnotationAssertion( "FMA:19729") AnnotationAssertion( "MA:0003116") AnnotationAssertion( "NCIT:C112234") AnnotationAssertion(Annotation( "FMA:19729") "bulbospongiosus") AnnotationAssertion(Annotation( ) Annotation( ) "musculus bulbospongiosus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "bulbocavernosus") AnnotationAssertion(Annotation( ) "bulbocavernosus muscle") AnnotationAssertion(Annotation( ) "bulbocavernous") AnnotationAssertion(Annotation( ) "bulbospongiosus") AnnotationAssertion( "UBERON:0011389") AnnotationAssertion(rdfs:label "bulbospongiosus muscle") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pudendal nerve) AnnotationAssertion(Annotation( ) "The pudendal nerve is a somatic nerve in the pelvic region that innervates the external genitalia of both sexes, as well as sphincters for the bladder and the rectum. It originates in Onuf's nucleus in the sacral region of the spinal cord.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:19037") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "internal pudendal nerve") AnnotationAssertion(Annotation( ) "pudenal nerve") AnnotationAssertion(Annotation( ) "pudendal") AnnotationAssertion( "UBERON:0011390") AnnotationAssertion(rdfs:label "pudendal nerve") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (perineal nerve) AnnotationAssertion(Annotation( ) "A nerve arising from the pudendal nerve that supplies the perineum.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:21866") AnnotationAssertion(Annotation( "FMA:21866") "perineal branch of pudendal nerve") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011391") AnnotationAssertion(rdfs:label "perineal nerve") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (blood vessel internal elastic membrane) AnnotationAssertion(Annotation( ) "A layer of elastic tissue that forms the outermost part of the tunica intima of blood vessels.") AnnotationAssertion(Annotation( "ncithesaurus:Internal_Elastic_Membrane") "A stretchable connective tissue membrane that is the outermost component of the tunica intima, delineating the border between the tunica media and the tunica intima.") AnnotationAssertion(Annotation( "FMA"^^xsd:string) "in FMA this is classified as an acellular membrane, which is inconsistent with our classification as a tissue layer. Requires further investigation") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:36301") AnnotationAssertion( "FMA:68205") AnnotationAssertion( "MA:0002863") AnnotationAssertion( "NCIT:C32842") AnnotationAssertion(Annotation( "ncithesaurus:Internal_Elastic_Membrane") "UMLS:C1512870") AnnotationAssertion(Annotation( "FMA:68205") "inner elastic lamina") AnnotationAssertion(Annotation( "FMA:68205") "internal elastic lamina") AnnotationAssertion(Annotation( "MA:0002863") "internal elastic membrane") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011392") AnnotationAssertion(rdfs:label "blood vessel internal elastic membrane") SubClassOf(Annotation( "MA"^^xsd:string) ) SubClassOf(Annotation( "MA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (cutaneous trunci muscle) AnnotationAssertion(Annotation( "MURDOCH:2210") "Lying just below the skin, cutaneus trunci is one of very few cutaneus muscles. It composes of a thin sheets of muscle that spred over the body in the superficial fasciae. Their role is to twich the skin to rid of pests etc. Cuteneus muscles are found in all domestic species.") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37501") AnnotationAssertion( "MA:0002285") AnnotationAssertion( "NCIT:C52901") AnnotationAssertion(Annotation( "MA:0002285") "cutaneous trunci") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011415") AnnotationAssertion(rdfs:comment "covers the entire body with a thin layer of muscle under the deepest layer of the skin. When an area of neuronal subluxation is stimulated with the activator, the cutaneous trunci muscle contracts and causes an involuntary reflexive spasm or \"twitch\" of the skin") AnnotationAssertion(rdfs:label "cutaneous trunci muscle") SubClassOf( ) # Class: (levator nasolabialis muscle) AnnotationAssertion(Annotation( "MURDOCH:1180") "Is a principal muscle of the lips which arises over the dorsum of the nose. It runs cranioventrally to insert partly on the wing of the nostril and partly into the lateral part of the upper lip. This muscles function includes dilation of the nostril, elevation and retraction of the upper lip. Branches of the facial nerve supply innervation to this muscle.") AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37502") AnnotationAssertion( "MA:0002334") AnnotationAssertion( "NCIT:C52950") AnnotationAssertion(Annotation( "ncithesaurus:Levator_Nasolabialis") "UMLS:C1708693") AnnotationAssertion(Annotation( "MA:0002334") "levator nasolabialis") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011464") AnnotationAssertion(rdfs:label "levator nasolabialis muscle") SubClassOf( ) # Class: (longissimus atlantis muscle) AnnotationAssertion(Annotation( ) "A muscle that runs beneath the longissimus capitis and inserts on the wing of the atlas.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "present in horses and dogs") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37649") AnnotationAssertion( "MA:0002335") AnnotationAssertion(Annotation( "MA:0002335") "longissimus atlantis") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011465") AnnotationAssertion(rdfs:label "longissimus atlantis muscle") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (rectus thoracis muscle) AnnotationAssertion(Annotation( "MURDOCH:2224") "Rectus thoracis is a very small quadrilateral muscle sheet from the lateral thorax runs from the 3rd-1st rib that is in continuation with rectus abdominis. Its functioning muscle in respiration.") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37709") AnnotationAssertion( "MA:0002366") AnnotationAssertion(Annotation( "MA:0002366") "rectus thoracis") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011495") AnnotationAssertion(rdfs:label "rectus thoracis muscle") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (sphincter colli superficialis muscle) AnnotationAssertion(Annotation( ) "The sphincter colli superficialis is composed of transverse muscle fibers, and covers the entire area between the lower jaw and chest. The muscle is used to tighten the skin on the underside of the throat.") AnnotationAssertion(Annotation( "Ryan 1989") Annotation( "Morphobank") ) AnnotationAssertion(Annotation( "Ryan 1989") Annotation( "Morphobank") ) AnnotationAssertion( "M. sphincter colli superficialis is present in Lagomorpha but absent in Rodentia (Meinertz, 1941, 1942; Ryan, 1989; Rinker, 1954). Some errouneous references of this muscle in rodents (e.g., Bezuidenhout and Evans, 2005) are due to decussating fibers of the deep sphincter, which creates a false superficial sphincter (Ryan, 1989)") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37699") AnnotationAssertion( "MA:0002380") AnnotationAssertion( "NCIT:C53016") AnnotationAssertion( "M. sphincter colli superficialis") AnnotationAssertion(Annotation( "MA:0002380") "sphincter colli superficialis") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011508") AnnotationAssertion(rdfs:label "sphincter colli superficialis muscle") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (sphincter colli profundus muscle) AnnotationAssertion(Annotation( ) "The sphincter colli profundus lies below the platysma in the area of the parotid gland (gland regions).") AnnotationAssertion( "M. sphincter colli profundus") AnnotationAssertion( "sphincter colli profundus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011509") AnnotationAssertion(rdfs:comment "The muscles of the mid and upper face derive from the embryonic sphincter colli profundus muscle") AnnotationAssertion(rdfs:label "sphincter colli profundus muscle") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (cloacal bursa) AnnotationAssertion(Annotation( ) Annotation( "UBERON:cjm"^^xsd:string) "An evagination of the cloaca. In Testudines these are hypothesized to function in different physiological roles, primarily in respiration.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011510") AnnotationAssertion(rdfs:comment "Taxon notes: in cryptodires, bursae apparently function primarily in buoyancy control and secondarily in ion transport and nesting, but several pleurodires have been shown recently to use them in aquatic respiration.[PMID:11479904]") AnnotationAssertion(rdfs:label "cloacal bursa") AnnotationAssertion( "https://upload.wikimedia.org/wikipedia/commons/d/d8/Turtle_Cloacal_Respiration.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (puborectalis muscle) AnnotationAssertion(Annotation( ) "The fibers which form a sling for the rectum are named the Puborectalis or Sphincter recti. They arise from the lower part of the symphysis pubis, and from the superior fascia of the urogenital diaphragm. They meet with the corresponding fibers of the opposite side around the lower part of the rectum, and form for it a strong sling. Relaxation reduces the angle between rectum and anus, allowing defecation in conjunction with relaxation of the internal and external sphincters. Puborectalis is part of the levator ani group of muscles.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:19091") AnnotationAssertion(Annotation( "FMA:19091") "puborectalis") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "puborectalis") AnnotationAssertion(Annotation( ) "sphincter recti") AnnotationAssertion( "UBERON:0011512") AnnotationAssertion(rdfs:label "puborectalis muscle") SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (abductor pollicis, radioulna-prepollox) AnnotationAssertion(Annotation( "AAO:0010805") "Originates on the distal radioulna and inserts on the palmar prepollex.") AnnotationAssertion( "AAO:0010805") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "AAO:0010805") "m. abductor pollicis") AnnotationAssertion( "UBERON:0011533") AnnotationAssertion(rdfs:label "abductor pollicis, radioulna-prepollox") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (abductor pollicis muscle) AnnotationAssertion( ) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011534") AnnotationAssertion(rdfs:label "abductor pollicis muscle") SubClassOf( ) SubClassOf( ) # Class: (chondroglossus muscle) AnnotationAssertion(Annotation( ) "The Chondroglossus is sometimes described as a part of the Hyoglossus, but is separated from it by fibers of the Genioglossus, which pass to the side of the pharynx. It is about 2 cm. long, and arises from the medial side and base of the lesser cornu and contiguous portion of the body of the hyoid bone, and passes directly upward to blend with the intrinsic muscular fibers of the tongue, between the Hyoglossus and Genioglossus.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:46700") AnnotationAssertion(Annotation( "FMA:46700") "chondroglossal") AnnotationAssertion(Annotation( "FMA:46700") "chondroglossus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "chondroglossal muscle") AnnotationAssertion(Annotation( "_muscle") Annotation( ) "musculus chondroglossus") AnnotationAssertion( "UBERON:0011535") AnnotationAssertion(rdfs:label "chondroglossus muscle") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (adductor pollicis muscle of prepollex) AnnotationAssertion(Annotation( "AAO:0010811") "Originates from the distal carpal 5-4-3 and inserts on the palmar prepollex.") AnnotationAssertion( "AAO:0010811") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "AAO:0010811") "m. adductor pollicis") AnnotationAssertion( "UBERON:0011564") AnnotationAssertion(rdfs:label "adductor pollicis muscle of prepollex") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lumen of gastrointestinal system) AnnotationAssertion( ) AnnotationAssertion( "FMA:54364") AnnotationAssertion( "cavity of digestive tract") AnnotationAssertion( "cavity of gastrointestinal tract") AnnotationAssertion(Annotation( "FMA:54364") "gastrointestinal tract lumen") AnnotationAssertion(Annotation( "FMA:54364") "lumen of gastrointestinal tract") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011565") AnnotationAssertion(rdfs:label "lumen of gastrointestinal system") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lumen of esophagus) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An anatomical cavity that is part of a esophagus.") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:18380") AnnotationAssertion( "FMA:9398") AnnotationAssertion( "cavity of eosophagus") AnnotationAssertion(Annotation( "FMA:9398") "cavity of esophagus") AnnotationAssertion( "eosophageal cavity") AnnotationAssertion( "eosophageal lumen") AnnotationAssertion( "eosophagus lumen") AnnotationAssertion(Annotation( "FMA:9398") "esophageal cavity") AnnotationAssertion(Annotation( "FMA:9398") "esophageal lumen") AnnotationAssertion(Annotation( "FMA:9398") "esophagus lumen") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011566") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "lumen of esophagus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (mesonephric duct lumen) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A tube lumen that is part of a mesonephric duct.") AnnotationAssertion( "EHDAA2:0001244") AnnotationAssertion(Annotation( "EHDAA2:0001244") "nephric duct lumen") AnnotationAssertion( "uberon") AnnotationAssertion( "cavity of nephric duct") AnnotationAssertion( "UBERON:0011574") AnnotationAssertion(rdfs:label "mesonephric duct lumen") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (styloid process of ulna) AnnotationAssertion(Annotation( ) "The styloid process of the ulna projects from the medial and back part of the bone; it descends a little lower than the head, and its rounded end affords attachment to the ulnar collateral ligament of the wrist[WP,unvetted].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:23628") AnnotationAssertion(Annotation( ) Annotation( ) "processus styloideus ulnae") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) Annotation( ) "processus styloideus ulnae") AnnotationAssertion(Annotation( "FMA:23628") "ulnar styloid process") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011575") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "styloid process of ulna") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (supraorbital ridge) AnnotationAssertion(Annotation( ) "The superior half of the orbital rim, which constitutes the curved superior border of the orbital opening, formed by the frontal bone.") AnnotationAssertion( ) AnnotationAssertion(Annotation( ) Annotation( "NCBITaxon:63221") "Neanderthals have a Supraorbital torus, a prominent, trabecular (spongy) brow ridge.") AnnotationAssertion(Annotation( "FMA"^^xsd:string) "see also: 'supraorbital flange'. FMA has 2 related classes, but these refer to the line and surface") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:317104") AnnotationAssertion( "NCIT:C82953") AnnotationAssertion(Annotation( "ncithesaurus:Orbital_Ridge") "UMLS:C2826587") AnnotationAssertion(Annotation( "FMA:53097") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "margo supraorbitalis") AnnotationAssertion( "superior orbital rim") AnnotationAssertion(Annotation( "FMA:317104") "supra-orbital margin") AnnotationAssertion( "supra-orbital ridge") AnnotationAssertion( "supraorbital margin") AnnotationAssertion(Annotation( ) Annotation( ) "frontal torus") AnnotationAssertion(Annotation( ) Annotation( "NCBITaxon:63221") Annotation( ) "supraorbital torus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "arcus superciliaris") AnnotationAssertion(Annotation( ) "eyebrow bone") AnnotationAssertion(Annotation( ) "frontal torus") AnnotationAssertion(Annotation( ) "margin of the orbit") AnnotationAssertion(Annotation( "FMA:53097") "margo supraorbitalis (os frontale)") AnnotationAssertion( "orbital ridge") AnnotationAssertion(Annotation( ) "superciliary ridge") AnnotationAssertion(Annotation( "FMA:53097") "supra-orbital border of frontal bone") AnnotationAssertion(Annotation( "FMA:53097") "supra-orbital margin of frontal bone") AnnotationAssertion(Annotation( ) "supraorbital arch") AnnotationAssertion(Annotation( ) "supraorbital margin") AnnotationAssertion(Annotation( "FMA:53097") "supraorbital margin of frontal bone") AnnotationAssertion(Annotation( "FMA:57137") "supraorbital surface of frontal bone") AnnotationAssertion(Annotation( ) "supraorbital torus") AnnotationAssertion( "UBERON:0011576") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "supraorbital ridge") AnnotationAssertion(rdfs:seeAlso ) AnnotationAssertion(rdfs:seeAlso ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses( ) # Class: (flexural organ) AnnotationAssertion(Annotation( ) Annotation( "ZFA:0007071") "A portion of tissue that is the most anterior portion of the notochord. The flexural organ secretes Reissner's fiber-related proteins, including F-spondin.") AnnotationAssertion( "we cannot classify as a secretory circumventricular organ, as this leads to unsatisfiability") AnnotationAssertion( ) AnnotationAssertion( "may be an ontogenetical remnant of the infundibular organ in cephalochordates") AnnotationAssertion( "ZFA:0007071") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011577") AnnotationAssertion(rdfs:label "flexural organ") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "ZFA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "unvetted") ObjectSomeValuesFrom( )) # Class: (platypus calcaneus spur) AnnotationAssertion( ) AnnotationAssertion( "The female platypus, in common with echidnas, has rudimentary spur buds which do not develop (dropping off before the end of their first year) and lack functional crural glands. Not to be confused with 'calcaneal spur', a small osteophyte (bone spur) located on the calcaneus (heel bone)") AnnotationAssertion( "uberon") AnnotationAssertion( "ankle spur") AnnotationAssertion( "calcaneus spur") AnnotationAssertion( "hind-leg spur") AnnotationAssertion( "poisonous ankle spur") AnnotationAssertion( "UBERON:0011581") AnnotationAssertion(rdfs:label "platypus calcaneus spur") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (paired limb/fin skeleton) AnnotationAssertion(Annotation( ) "The collection of all skeletal elements in an individual limb or fin.") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "VSAO:0000301") Annotation( "VSAO"^^xsd:string) Annotation( "GO_REF:0000034, http://dx.plos.org/10.1371/journal.pone.0051070") "Skeletal subdivision that is part of the paired limb/fin.[VSAO]") AnnotationAssertion( "VSAO:0000301") AnnotationAssertion(Annotation( "VSAO:0000301") "limb/fin skeleton") AnnotationAssertion( "skeletal parts of limb/fin") AnnotationAssertion( "skeleton of limb/fin") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011582") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "paired limb/fin skeleton") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "ISBN:9780878932504") ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (stylopodial skeleton) AnnotationAssertion(Annotation( "VSAO:0005007") "Proximal element of a free limb skeleton consisting of the femur and humerus in the forelimb stylopodium and hindlimb stylopodium respectively[VSAO, modified].") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "VSAO:0005007") Annotation( "VSAO"^^xsd:string) Annotation( "VSAO:NI") "Proximal element of the limb skeleton consisting of the femur and humerus in the forelimb stylopodium and hindlimb stylopodium respectively.[VSAO]") AnnotationAssertion( "propodial") AnnotationAssertion( "stylopodial") AnnotationAssertion( "VSAO:0005007") AnnotationAssertion( "stylopodium skeleton") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "ISBN:0226313409") Annotation( ) "mesomere 1") AnnotationAssertion( "propodial skeleton") AnnotationAssertion(Annotation( "VSAO:0005007") "propodium") AnnotationAssertion(Annotation( "ISBN:0226313409") Annotation( ) "proximal metapterygial mesomere") AnnotationAssertion(Annotation( "VSAO:0005007") "stylopod") AnnotationAssertion( "stylopodium") AnnotationAssertion( "UBERON:0011583") AnnotationAssertion(rdfs:label "stylopodial skeleton") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "VSAO"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (zeugopodial skeleton) AnnotationAssertion(Annotation( "VSAO:0005010") "Section of the forelimb skeleton located between the stylopodium and the autopodium.") AnnotationAssertion( "zeugopodial") AnnotationAssertion( "zygopodial") AnnotationAssertion( "VSAO:0005010") AnnotationAssertion( "epipodial skeleton") AnnotationAssertion(Annotation( ) "skeleton of zeugopod") AnnotationAssertion(Annotation( ) "zeugopod skeleton") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "VSAO:0005010") "epipodium") AnnotationAssertion(Annotation( "ISBN:0226313409") Annotation( ) "mesomere 2") AnnotationAssertion(Annotation( "ISBN:0226313409") Annotation( ) "mesomere 2 skeleton") AnnotationAssertion(Annotation( "VSAO:0005010") "zygopodium") AnnotationAssertion( "UBERON:0011584") AnnotationAssertion(rdfs:label "zeugopodial skeleton") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "VSAO"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (cell condensation) AnnotationAssertion(Annotation( ) Annotation( "GO_REF:0000034"^^xsd:string) Annotation( "PSPUB:0000170"^^xsd:string) Annotation( "VSAO:0000006") "Anatomical structure that is an aggregation of similar cells from which cartilages and bones form, and from which chondrogenesis and osteogenesis are initiated during repair and/or regeneration. (Hall and Miyake 1995).") AnnotationAssertion( "consider obsoleting, coordinate with VSAO") AnnotationAssertion( "VSAO:0000006") AnnotationAssertion( "XAO:0004021") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011585") AnnotationAssertion(rdfs:label "cell condensation") SubClassOf(Annotation( "VSAO"^^xsd:string) ) # Class: (obsolete proteinaceous extracellular matrix) AnnotationAssertion( "GO:0005578") AnnotationAssertion( "VSAO:0000021") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011586") AnnotationAssertion(rdfs:comment "obsoleted as it was already present in GO") AnnotationAssertion(rdfs:label "obsolete proteinaceous extracellular matrix") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (pre-dentine) AnnotationAssertion(Annotation( ) Annotation( "GO_REF:0000034"^^xsd:string) Annotation( "PSPUB:0000170"^^xsd:string) Annotation( "VSAO:0000071") "Odontogenic tissue that is collagen-rich and characteristic of vertebrate teeth and tooth-like structures (e.g., odontodes) deposited by preodontoblasts and odontoblasts that are typically excluded from the matrix.") AnnotationAssertion( "EMAPA:36439") AnnotationAssertion( "VSAO:0000071") AnnotationAssertion( "XAO:0004052") AnnotationAssertion(Annotation( "VSAO:curator"^^xsd:string) "pre-dentine tissue") AnnotationAssertion(Annotation( "PMCID:PMC3360947") "predentin") AnnotationAssertion(Annotation( "VSAO:curator"^^xsd:string) "predentine tissue") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011587") AnnotationAssertion(rdfs:label "pre-dentine") SubClassOf(Annotation( "VSAO"^^xsd:string) ) SubClassOf(Annotation( "text definition") ObjectSomeValuesFrom( )) # Class: (pre-enamel) AnnotationAssertion(Annotation( ) Annotation( "GO_REF:0000034"^^xsd:string) Annotation( "PSPUB:0000170"^^xsd:string) Annotation( "VSAO:0000066") "Odontogenic tissue that is avascular non-mineralized matrix that is deposited by preameloblast and ameloblasts that are excluded from the matrix.") AnnotationAssertion( "VSAO:0000066") AnnotationAssertion( "XAO:0004202") AnnotationAssertion(Annotation( "VSAO:curator"^^xsd:string) "pre-enamel tissue") AnnotationAssertion(Annotation( "VSAO:curator"^^xsd:string) "preenamel tissue") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011588") AnnotationAssertion(rdfs:label "pre-enamel") SubClassOf(Annotation( "VSAO"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (non-mineralized cartilage tissue) AnnotationAssertion(Annotation( ) Annotation( "GO_REF:0000034"^^xsd:string) Annotation( "PSPUB:0000170"^^xsd:string) Annotation( "VSAO:0000089") "Cartilage tissue that is not mineralized.") AnnotationAssertion( "add developmental relationships; add disjointness axiom") AnnotationAssertion( "VSAO:0000089") AnnotationAssertion( "XAO:0004044") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011589") AnnotationAssertion(rdfs:label "non-mineralized cartilage tissue") SubClassOf(Annotation( "VSAO"^^xsd:string) ) # Class: (commissure of diencephalon) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A commissure that is part of a diencephalon.") AnnotationAssertion( "FMA:62445") AnnotationAssertion(Annotation( "FMA:62445") "diencephalon commissure") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011590") AnnotationAssertion(rdfs:label "commissure of diencephalon") SubClassOf( ) SubClassOf( ) # Class: (tract of diencephalon) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An axon tract that is part of a diencephalon.") AnnotationAssertion( "FMA:62447") AnnotationAssertion(Annotation( "FMA:62447") "diencephalon tract") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011591") AnnotationAssertion(rdfs:label "tract of diencephalon") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (future upper lip) AnnotationAssertion( "EHDAA2:0002120") AnnotationAssertion(Annotation( "EHDAA2:0002120") "upper jaw future lip") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011592") AnnotationAssertion(rdfs:label "future upper lip") SubClassOf(Annotation( "EHDAA2"^^xsd:string) ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "fusion") ObjectSomeValuesFrom( )) SubClassOf(Annotation( "fusion") ObjectSomeValuesFrom( )) # Class: (maxillary tooth) AnnotationAssertion(Annotation( "TAO:0001627") "A tooth that is attached to a maxilla[TAO,modified].") AnnotationAssertion( "this ontology also contains a class for 'tooth of upper jaw'. This is not equivalent to 'maxillary tooth' in a multi-species context, because many vertebrates have other tooth-bearing bones in the upper jaw[http://orcid.org/0000-0002-6601-2165]") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0001627") Annotation( "TAO"^^xsd:string) Annotation( "TAO:wd"^^xsd:string) "Tooth that is attached to the maxilla.[TAO]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0000287") AnnotationAssertion( "FMA:321646") AnnotationAssertion( "TAO:0001627") AnnotationAssertion(Annotation( "AAO:0000287") Annotation( ) "maxillary teeth") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011593") AnnotationAssertion(rdfs:label "maxillary tooth") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (dentary tooth) AnnotationAssertion(Annotation( "TAO:0001628") "Tooth that is attached to a dentary/mandible[TAO,modified].") AnnotationAssertion( "Note that we treat dentary tooth and mandibular tooth as equivalent") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0001628") Annotation( "TAO"^^xsd:string) Annotation( "TAO:wd"^^xsd:string) "Tooth that is attached to the dentary.[TAO]") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0001628") Annotation( "TAO"^^xsd:string) "relationship loss: part_of dentary tooth row (TAO:0001952)[TAO]") AnnotationAssertion( ) AnnotationAssertion( "AAO:0000125") AnnotationAssertion( "AAO:0000641") AnnotationAssertion( "FMA:321647") AnnotationAssertion( "TAO:0001628") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "AAO:0000641") Annotation( ) "mandibular teeth") AnnotationAssertion( "mandibular tooth") AnnotationAssertion( "tooth of dentary") AnnotationAssertion( "UBERON:0011594") AnnotationAssertion(rdfs:label "dentary tooth") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (jaw region) AnnotationAssertion(Annotation( ) "A subdivision of the head that corresponds to the jaw skeleton, containing both soft tissue, skeleton and teeth (when present). The jaw region is divided into upper and lower regions.") AnnotationAssertion( "EMAPA:32905") AnnotationAssertion( "NCIT:C114916") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011595") AnnotationAssertion(rdfs:label "jaw region") AnnotationAssertion(rdfs:seeAlso "http://eol.org/collections/11578"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "EMAPA"^^xsd:string) Annotation( "FMA-abduced") Annotation( "ZFA-abduced") ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (future lower lip) AnnotationAssertion( "EHDAA2:0001020") AnnotationAssertion(Annotation( "EHDAA2:0001020") "lower jaw future lip") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011596") AnnotationAssertion(rdfs:label "future lower lip") SubClassOf(Annotation( "EHDAA2"^^xsd:string) ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (bone of upper jaw) AnnotationAssertion(Annotation( ) "Any bone that is part of the upper jaw skeleton. This includes (when present): the maxilla, the quadrate (in some species).") AnnotationAssertion( "Do not manually classify under here - bones are automatically classified") AnnotationAssertion( "upper jaw bone") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011597") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "bone of upper jaw") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (coronoid bone) AnnotationAssertion(Annotation( "TAO:0001673") "coronoid process") AnnotationAssertion( "AAO:0000103") AnnotationAssertion( "TAO:0001673") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011598") AnnotationAssertion(rdfs:label "coronoid bone") SubClassOf( ) SubClassOf(Annotation( "AAO"^^xsd:string) ) SubClassOf(Annotation( "mandibular series") Annotation( "ISBN:0073040584"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (lenticular process of incus bone) AnnotationAssertion(Annotation( ) "The long ventral process of the incus bone which articulates with the stapes.") AnnotationAssertion(Annotation( ) "the lenticular process may be homologous to the shaft of the stapes and result from fusion of the former quadrate- stapes articulation. This speculation is consistent with the observation that artiodactyls have a very short lenticular process (Thewissen & Hussain (1993)), with perhaps greater length to the corresponding process of the stapes") AnnotationAssertion( "lenticular process") AnnotationAssertion( "processus lenticularis") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:52775") AnnotationAssertion(Annotation( ) "incus crus longum") AnnotationAssertion(Annotation( "FMA:52775") "lenticular process of incus") AnnotationAssertion(Annotation( "FMA:52775") "processus lenticularis (incus)") AnnotationAssertion(Annotation( "FMA:52775") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "processus lenticularis incudis") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011599") AnnotationAssertion(rdfs:label "lenticular process of incus bone") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (gingiva of upper jaw) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A gingiva that is part of a upper jaw region.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:18970") AnnotationAssertion( "FMA:59763") AnnotationAssertion( "NCIT:C54205") AnnotationAssertion( "gum of maxilla") AnnotationAssertion(Annotation( "EMAPA:18970") "gum of upper jaw") AnnotationAssertion( "upper gingiva") AnnotationAssertion(Annotation( "FMA:59763") "upper jaw gingiva") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:59763") "maxillary gum") AnnotationAssertion( "upper gum") AnnotationAssertion( "UBERON:0011601") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "gingiva of upper jaw") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (gingiva of lower jaw) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A gingiva that is part of a lower jaw region.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:18967") AnnotationAssertion( "FMA:59764") AnnotationAssertion( "NCIT:C54204") AnnotationAssertion(Annotation( "EMAPA:18967") "gum of lower jaw") AnnotationAssertion( "gum of mandible") AnnotationAssertion( "lower gingiva") AnnotationAssertion(Annotation( "FMA:59764") "lower jaw gingiva") AnnotationAssertion( "uberon") AnnotationAssertion( "lower gum") AnnotationAssertion(Annotation( "FMA:59764") "lower jaw gum") AnnotationAssertion(Annotation( "FMA:59764") "mandibular gum") AnnotationAssertion( "UBERON:0011602") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "gingiva of lower jaw") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (coronoid tooth) AnnotationAssertion(Annotation( ) "Tooth that is attached to a coronoid bone.") AnnotationAssertion( "AAO:0000104") AnnotationAssertion(Annotation( "AAO:0000104") Annotation( ) "coronoid teeth") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011603") AnnotationAssertion(rdfs:label "coronoid tooth") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (hyomandibular bone) AnnotationAssertion(Annotation( ) Annotation( "TAO:0000672") "Replacement bone that is bilaterally paired and (in teleosts) articulates with the neurocranium dorsally and the opercle posteriorly[TAO,modified].") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0000672") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "Replacement bone that is bilaterally paired and articulates with the neurocranium dorsally and the opercle posteriorly.[TAO]") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0000672") Annotation( "TAO"^^xsd:string) "relationship loss: overlaps hyomandibula-metapterygoid joint (TAO:0001979)[TAO]") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0000672") Annotation( "TAO"^^xsd:string) "relationship loss: overlaps hyomandibula-opercle joint (TAO:0005265)[TAO]") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0000672") Annotation( "TAO"^^xsd:string) "relationship loss: overlaps hyomandibular-otic region joint (TAO:0001947)[TAO]") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0000672") Annotation( "TAO"^^xsd:string) "relationship loss: overlaps preopercle vertical limb-hyomandibula joint (TAO:0005278)[TAO]") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0000672") Annotation( "TAO"^^xsd:string) "relationship loss: overlaps quadrate-hyomandibula joint (TAO:0001801)[TAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000688") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "DOI:10.1017/S0022215100009087 Gerrie J, The phylogeny of the mammalian tympanic cavity and auditory ossicles. The Journal of Laryngology and Otology (1948)") "This structure (the hyomandibular), on ontogenic grounds alone, can be considered homologous with the amphibian and reptilian columella and the mammalian stapes.[well established][VHOG]") AnnotationAssertion( "In most teleosts, there is a symplectic, and the hyomandibula articulates with it anteroventrally.") AnnotationAssertion(Annotation( "TAO:0000672") "hyomandibula") AnnotationAssertion(Annotation( ) Annotation( "TAO:0000672") "hyomandibular") AnnotationAssertion( ) AnnotationAssertion( "EFO:0003556") AnnotationAssertion( "TAO:0000672") AnnotationAssertion( "VHOG:0000688") AnnotationAssertion( "ZFA:0000672") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011606") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "hyomandibular bone") SubClassOf(Annotation( "TAO"^^xsd:string) ) SubClassOf( ) SubClassOf(Annotation( "TAO"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (hyomandibular cartilage) AnnotationAssertion(Annotation( ) "Cartilage form of the hyomandibular element.") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0001422") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "Pharyngeal arch cartilage that is bilaterally paired and articulates with the chondrocranium dorsally, the opercle bone posteriorly, and the palatoquadrate cartilage anteriorly.[TAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000688") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "DOI:10.1017/S0022215100009087 Gerrie J, The phylogeny of the mammalian tympanic cavity and auditory ossicles. The Journal of Laryngology and Otology (1948)") "This structure (the hyomandibular), on ontogenic grounds alone, can be considered homologous with the amphibian and reptilian columella and the mammalian stapes.[well established][VHOG]") AnnotationAssertion( "The stapes is homologous to the hyomandibula. In this ontology, we use the class 'hyomandibular cartilage' generally to include the future stapes, the future hyomandibular bone of teleosts and the unossified cartilage in sharks.") AnnotationAssertion( "EFO:0003686") AnnotationAssertion( "TAO:0001422") AnnotationAssertion( "VHOG:0000688") AnnotationAssertion( "ZFA:0001422") AnnotationAssertion(Annotation( "ZFA:0001422") "hyosymplectic cartilage") AnnotationAssertion(Annotation( "TAO:0001422") "symplectic cartilage") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011607") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "hyomandibular cartilage") SubClassOf(Annotation( "TAO"^^xsd:string) ) SubClassOf( ) # Class: (hyomandibular element) AnnotationAssertion(Annotation( ) "The upper paired deep bone or cartilage of the hyoid region, sometimes taking part in jaw suspension and which supports the opercle. Dorsally it articulates with the otic capsule at the hyomandibular fossa, ventrally with the quadrate and symplectic. In most Teleostei it has a foramen for the hyomandibular branch of the facial nerve (VII).") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0000672") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "Replacement bone that is bilaterally paired and articulates with the neurocranium dorsally and the opercle posteriorly.[TAO]") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0000672") Annotation( "TAO"^^xsd:string) "relationship loss: overlaps hyomandibula-metapterygoid joint (TAO:0001979)[TAO]") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0000672") Annotation( "TAO"^^xsd:string) "relationship loss: overlaps hyomandibula-opercle joint (TAO:0005265)[TAO]") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0000672") Annotation( "TAO"^^xsd:string) "relationship loss: overlaps hyomandibular-otic region joint (TAO:0001947)[TAO]") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0000672") Annotation( "TAO"^^xsd:string) "relationship loss: overlaps preopercle vertical limb-hyomandibula joint (TAO:0005278)[TAO]") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0000672") Annotation( "TAO"^^xsd:string) "relationship loss: overlaps quadrate-hyomandibula joint (TAO:0001801)[TAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000688") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "DOI:10.1017/S0022215100009087 Gerrie J, The phylogeny of the mammalian tympanic cavity and auditory ossicles. The Journal of Laryngology and Otology (1948)") "This structure (the hyomandibular), on ontogenic grounds alone, can be considered homologous with the amphibian and reptilian columella and the mammalian stapes.[well established][VHOG]") AnnotationAssertion(Annotation( "2012-09-06"^^xsd:string) Annotation( "TAO:0000672") Annotation( "TAO"^^xsd:string) Annotation( "Curator"^^xsd:string) "In most teleosts, there is a symplectic, and the hyomandibula articulates with it anteroventrally.[TAO]") AnnotationAssertion( "TAO:0000672") AnnotationAssertion( "VHOG:0000688") AnnotationAssertion(Annotation( "VHOG:0000688") "hyomandibula - stapes") AnnotationAssertion( "hyomandibula element") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "epihyal") AnnotationAssertion( "hyomandibula") AnnotationAssertion( "UBERON:0011608") AnnotationAssertion(rdfs:label "hyomandibular element") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (ceratohyal element) AnnotationAssertion( "uberon") AnnotationAssertion( "keratohyal element") AnnotationAssertion( "UBERON:0011609") AnnotationAssertion(rdfs:label "ceratohyal element") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "TAO-abduced") ObjectSomeValuesFrom( )) # Class: (ceratohyal cartilage) AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0001400") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "Pharyngeal arch cartilage that is bilaterally paired and the largest cartilaginous component of the ventral hyoid arch.[TAO]") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0001400") Annotation( "TAO"^^xsd:string) "relationship loss: overlaps ceratohyal-branchiostegal ray joint (TAO:0001850)[TAO]") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0001400") Annotation( "TAO"^^xsd:string) "relationship loss: overlaps dorsal hypohyal-urohyal joint (TAO:0001847)[TAO]") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0001400") Annotation( "TAO"^^xsd:string) "relationship loss: overlaps epihyal-branchiostegal ray joint (TAO:0001849)[TAO]") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0001400") Annotation( "TAO"^^xsd:string) "relationship loss: overlaps inter-ventral hypohyal joint (TAO:0001846)[TAO]") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0001400") Annotation( "TAO"^^xsd:string) "relationship loss: overlaps interhyal-epihyal joint (TAO:0001841)[TAO]") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0001400") Annotation( "TAO"^^xsd:string) "relationship loss: overlaps ventral hypohyal-urohyal joint (TAO:0001848)[TAO]") AnnotationAssertion( "TAO:0001400") AnnotationAssertion( "ZFA:0001400") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011610") AnnotationAssertion(rdfs:label "ceratohyal cartilage") SubClassOf(Annotation( "TAO"^^xsd:string) ) SubClassOf( ) # Class: (ceratohyal bone) AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0000578") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "Replacement bone that is bilaterally paired and articulates with the hypohyal cartilage or bone, dorsal and ventral hypohyals, and posterior ceratohyal posteriorly.[TAO]") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0000578") Annotation( "TAO"^^xsd:string) "relationship loss: overlaps ceratohyal-branchiostegal ray joint (TAO:0001850)[TAO]") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0000578") Annotation( "TAO"^^xsd:string) "relationship loss: overlaps ceratohyal-dorsal hypohyal joint (TAO:0001843)[TAO]") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0000578") Annotation( "TAO"^^xsd:string) "relationship loss: overlaps ceratohyal-ventral hypohyal joint (TAO:0001844)[TAO]") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0000578") Annotation( "TAO"^^xsd:string) "relationship loss: overlaps epihyal-ceratohyal joint (TAO:0001842)[TAO]") AnnotationAssertion( ) AnnotationAssertion( "AAO:0000666") AnnotationAssertion( "TAO:0000578") AnnotationAssertion( "ZFA:0000578") AnnotationAssertion(Annotation( "TAO:0000578") "anterior ceratohyal") AnnotationAssertion(Annotation( "TAO:0000578") "anterohyal") AnnotationAssertion(Annotation( "TAO:0000578") "ceratohyal") AnnotationAssertion(Annotation( "TAO:0000578") "ceratohyal anterior") AnnotationAssertion(Annotation( "TAO:0000578") "ceratohyal bone") AnnotationAssertion( "ceratohyoid bone") AnnotationAssertion(Annotation( "TAO:0000578") "distal ceratohyal") AnnotationAssertion(Annotation( "TAO:0000578") "rostral ceratohyal") AnnotationAssertion(Annotation( ) "ceratohyoid") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "TAO:0000578") Annotation( ) "anterohyals") AnnotationAssertion(Annotation( "AAO:0000666") "ceratohyale") AnnotationAssertion(Annotation( "TAO:0000578") Annotation( ) "ceratohyals") AnnotationAssertion(Annotation( "AAO:0000666") "hyale") AnnotationAssertion(Annotation( "AAO:0000666") "hyoid") AnnotationAssertion(Annotation( "AAO:0000666") "keratohyale") AnnotationAssertion(Annotation( "AAO:0000666") "zungenbeinknorpel") AnnotationAssertion( "UBERON:0011611") AnnotationAssertion(rdfs:label "ceratohyal bone") SubClassOf(Annotation( "TAO"^^xsd:string) ) SubClassOf( ) SubClassOf(Annotation( "TAO"^^xsd:string) ObjectSomeValuesFrom( )) DisjointClasses(Annotation( "lexical"^^xsd:string) ) # Class: (hypohyal cartilage) AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0001868") Annotation( "TAO"^^xsd:string) Annotation( "TAO:wd"^^xsd:string) "Pharyngeal arch cartilage that is bilaterally paired and articulates posteriorly with the ceratohyal cartilage.[TAO]") AnnotationAssertion( "TAO:0001868") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011612") AnnotationAssertion(rdfs:label "hypohyal cartilage") SubClassOf(Annotation( "TAO"^^xsd:string) ) SubClassOf( ) # Class: (hypohyal element) AnnotationAssertion(Annotation( ) "The hypohyal is a ventral element of the hyoid arch which links the ceratohyal and the basihyal.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011613") AnnotationAssertion(rdfs:label "hypohyal element") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "TAO-abduced") ObjectSomeValuesFrom( )) # Class: (basihyal element) AnnotationAssertion(Annotation( "TAO:0001891") "Skeletal element that is median and is the anterior-most element of the ventral hyoid arch.") AnnotationAssertion( "TAO:0001891") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011614") AnnotationAssertion(rdfs:label "basihyal element") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "TAO"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (basihyal cartilage) AnnotationAssertion(Annotation( "TAO:0001510") "Pharyngeal arch cartilage that is median and is the anterior-most cartilage of the ventral hyoid arch.") AnnotationAssertion( "TAO:0001510") AnnotationAssertion( "ZFA:0001510") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "TAO:0001510") "copula 1") AnnotationAssertion( "UBERON:0011615") AnnotationAssertion(rdfs:label "basihyal cartilage") SubClassOf(Annotation( "TAO"^^xsd:string) ) SubClassOf( ) # Class: (basihyal bone) AnnotationAssertion(Annotation( "TAO:0000316") "Replacement bone that is median and is the anterior-most bone of the ventral hyoid arch.") AnnotationAssertion( "TAO:0000316") AnnotationAssertion( "VSAO_RETIRED:0000007") AnnotationAssertion( "ZFA:0000316") AnnotationAssertion(Annotation( "TAO:0000316") "basihyoid") AnnotationAssertion(Annotation( "TAO:0000316") "glossohyal") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011618") AnnotationAssertion(rdfs:label "basihyal bone") SubClassOf(Annotation( "TAO"^^xsd:string) ) SubClassOf( ) SubClassOf(Annotation( "TAO"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (stylohyoid bone) AnnotationAssertion(Annotation( "MURDOCH:1758") "This is the paired bone that makes up the segment of the mammalian hyoid apparatus connecting the epihyoids with the skull via the tympanohyoid cartilages on each side. Ventrally, it defines the medial and lateral compartments of the guttural pouch in the horse.") AnnotationAssertion(Annotation( "MURDOCH") "The stylohyoid bone is one of the four bones ( stylohyoid, ceratohyoid, basihyoid, thyrohyoid) of the hyoid apparatus in the horse. Other species have five bones, the fifth being the epihyoid that is not present in the horse. The stylohyoid bone in the horse is significantly larger compared to other bones of the hyoid apparatus and divides the guttural pouch into two chambers, medial and lateral. The hyoid apparatus consists of a series of bony rods, jointed together and forming a means of suspending the tongue and larynx from the skull") AnnotationAssertion( ) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011619") AnnotationAssertion(rdfs:label "stylohyoid bone") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (basihyal lingual process) AnnotationAssertion(Annotation( "MURDOCH:1080") "A projection on the basihyal bone. Laterally the lingual process is compressed. It has a blunt pointed free end, and its lateral surfaces are slightly concave. The dorsal border is thin and irregular, and the ventral border is thick and rough. In the living animal the lingual process is embedded within the root of the tongue.") AnnotationAssertion( "lingual process of basihyoid") AnnotationAssertion( "lingual process of basihyoid bone") AnnotationAssertion( "uberon") AnnotationAssertion( "lingual process of hyoid") AnnotationAssertion( "UBERON:0011620") AnnotationAssertion(rdfs:label "basihyal lingual process") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (thyrohyoid cartilage) AnnotationAssertion(Annotation( "MURDOCH:2033") "This small finger of cartilage completes the connection between the thyrohyoid bone and the thyroid cartilage (rostral cornu).") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011621") AnnotationAssertion(rdfs:label "thyrohyoid cartilage") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (thyrohyoid bone) AnnotationAssertion(Annotation( "MURDOCH:1951") "Is a laterally bowed, sagittally compressed, slender element that extends from dorsocaudally from the lateral parts of the basihyoid. It connects the basiohyoid with the rostral corner of the thyroid cartlilage of the larynx.") AnnotationAssertion( ) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011622") AnnotationAssertion(rdfs:label "thyrohyoid bone") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (horn of thyroid cartilage) AnnotationAssertion( ) AnnotationAssertion( "FMA:55300") AnnotationAssertion(Annotation( "FMA:55300") "cornu of thyroid cartilage") AnnotationAssertion(Annotation( "FMA:55300") "thyroid cartilage horn") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011623") AnnotationAssertion(rdfs:label "horn of thyroid cartilage") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (superior horn of thyroid cartilage) AnnotationAssertion(Annotation( ) "The superior horn of thyroid cartilage is long and narrow, directed upward, backward, and medialward, and ends in a conical extremity, which gives attachment to the lateral hyothyroid ligament.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:55294") AnnotationAssertion(Annotation( "FMA:55294") "cornu superius (cartilago thyroidea)") AnnotationAssertion(Annotation( ) "cornu superius cartilaginis thyroideae") AnnotationAssertion(Annotation( "FMA:55294") "superior cornu of thyroid cartilage") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011624") AnnotationAssertion(rdfs:label "superior horn of thyroid cartilage") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (inferior horn of thyroid cartilage) AnnotationAssertion(Annotation( ) "The inferior horn of thyroid cartilage is short and thick; it is directed downward, with a slight inclination forward and medialward, and presents, on the medial side of its tip, a small oval articular facet for articulation with the side of the cricoid cartilage.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:55297") AnnotationAssertion(Annotation( "FMA:55297") "cornu inferius (cartilago thyroidea)") AnnotationAssertion(Annotation( "FMA:55297") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "cornu inferius cartilaginis thyroidea") AnnotationAssertion(Annotation( ) "cornu inferius cartilaginis thyroideae") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011625") AnnotationAssertion(rdfs:label "inferior horn of thyroid cartilage") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (tympanohyoid cartilage) AnnotationAssertion(Annotation( ) "The terminal segment in the chain of skeletal elements of the hyoid apparatus. One of a pair of rods of cartilage that connect the hyoid bone to the styloid process of the petrous part of the temporal bone.") AnnotationAssertion( ) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011626") AnnotationAssertion(rdfs:label "tympanohyoid cartilage") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (orbital part of frontal bone) AnnotationAssertion(Annotation( ) "A zone of the frontal bone that consists of two thin triangular plates, the orbital plates, which form the vaults of the orbits, and are separated from one another by a median gap, the ethmoidal notch.") AnnotationAssertion( ) AnnotationAssertion( "FMA:52849") AnnotationAssertion(Annotation( "FMA:52849") "pars orbitalis (os frontale)") AnnotationAssertion(Annotation( ) Annotation( ) "pars orbitalis ossis frontalis") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "pars orbitalis") AnnotationAssertion( "UBERON:0011627") AnnotationAssertion(rdfs:label "orbital part of frontal bone") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA-abduced-lr"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (early premaxilla) AnnotationAssertion( "EHDAA2:0001495") AnnotationAssertion( "future premaxilla") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011628") AnnotationAssertion(rdfs:label "early premaxilla") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "ISBN:0073040584"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (supratemporal bone) AnnotationAssertion( "supratemporal") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011629") AnnotationAssertion(rdfs:label "supratemporal bone") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "temporal series") Annotation( "ISBN:0073040584"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (intertemporal bone) AnnotationAssertion( "intertemporal") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011630") AnnotationAssertion(rdfs:label "intertemporal bone") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "temporal series") Annotation( "ISBN:0073040584"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (tabular bone) AnnotationAssertion( "tabular") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011631") AnnotationAssertion(rdfs:label "tabular bone") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "temporal series") Annotation( "ISBN:0073040584"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (ectopterygoid bone) AnnotationAssertion(Annotation( ) "A palatal bone which -- like many palatal bones -- may originally have developed as a dermal bone replacing part of the palatoquadrate, the primitive upper jaw. Like the palatine (also called dermopalatine), the ectopterygoid replaces the middle part of the autopalatine. It may be serially homologous with the palatine(s), but is somewhat specialized, being the last (most posterior in palatal view) of the series and bordering the fossa for the jaw muscles. In a typical tetrapod it abuts the palatine anteriorly, the maxilla laterally, the pterygoid or the fossa mandubuaris medially, and the fossa posteriorly.") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0000656") Annotation( "TAO"^^xsd:string) Annotation( "TAO:ga_tg") Annotation( "ZFIN:curator"^^xsd:string) "Dermal bone that forms the lateral border of the palate and articulates with the quadrate posteriorly, the entopterygoid medially and the dermopalatine and/or autopalatine antero-laterally. The ectopterygoid is a paired bone.[TAO]") AnnotationAssertion(Annotation( "2012-09-06"^^xsd:string) Annotation( "TAO:0000656") Annotation( "TAO"^^xsd:string) Annotation( "Curator"^^xsd:string) "The ectopterygoid is often toothed.[TAO]") AnnotationAssertion(Annotation( "TAO") "taken from TAO but is present in tetrapods") AnnotationAssertion( "EFO:0003552") AnnotationAssertion( "TAO:0000656") AnnotationAssertion( "ZFA:0000656") AnnotationAssertion(Annotation( "TAO:0000656") "ectopterygoid") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "ZFA:0000656") Annotation( ) "ectopterygoids") AnnotationAssertion( "UBERON:0011634") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "ectopterygoid bone") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (splenial bone) AnnotationAssertion(Annotation( ) "The splenial is a small bone in the lower jaw of reptiles, amphibians and birds, usually located on the lingual side (closest to the tongue) between the angular and suprangular.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0000573") AnnotationAssertion(Annotation( "AAO:0000573") "splenial") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011635") AnnotationAssertion(rdfs:label "splenial bone") SubClassOf( ) SubClassOf(Annotation( "AAO"^^xsd:string) ) SubClassOf(Annotation( "mandibular series") Annotation( "ISBN:0073040584"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (surangular bone) AnnotationAssertion(Annotation( ) "The surangular is a dermal bone of the lower jaw. It typically covers much of the dorsal and lateral surface of the posterior jaw and variably extends onto the medial (inside) surface. The surangular articulates with and supports the articular, which forms the jaw joint with the quadrate in most vertebrates, and is in turn supported by the angular. More distally, the surangular bridges the mandibular fenestra, if one is present. It may also bear a raised dorsal coronoid process, an important attachment site for the mandibular adductors. At its distal (or rostral) end, the surangular meets the dentary, the main tooth-bearing bone of the lower jaw in most vertebrates.") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0002287") Annotation( "TAO"^^xsd:string) Annotation( "TAO:wd"^^xsd:string) "Dermal bone of the suspensorium.[TAO]") AnnotationAssertion( "In some lepospondyls, and in frogs and salamanders, the surangular is absent. However, it becomes increasingly significant in the anthracosaur lineage. In turtles, it is one of the two principle bones of the lower jaw. In lepidosaurs, it is less important because of the development of a separate coronoid bone. In advanced lizards and pythonomorphs, it may fuse with the articular and perhaps other bones and loses its separate identity. In syanapsids, a secondary jaw joint develops between the surangular and the squamosal, which becomes the unique mammalian jaw articulation. However, the surangular fuses with the dentary and becomes the unitary mammalian 'mandible' without a separate identity") AnnotationAssertion(Annotation( "paleos") "Nevertheless, it is not completely clear that this[osteichthyans] surangular is homologous with the surangular in tetrapods") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "TAO:0002287") AnnotationAssertion(Annotation( "TAO:0002287") "surangular") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "supra-angular") AnnotationAssertion(Annotation( ) "supra-angular bone") AnnotationAssertion(Annotation( ) "supraangular") AnnotationAssertion(Annotation( ) "supraangular bone") AnnotationAssertion(Annotation( ) Annotation( ) "suprangular") AnnotationAssertion(Annotation( ) "suprangular bone") AnnotationAssertion( "UBERON:0011636") AnnotationAssertion(rdfs:label "surangular bone") SubClassOf( ) SubClassOf(Annotation( "Palaeos") Annotation( "TAO"^^xsd:string) ) SubClassOf(Annotation( "mandibular series") Annotation( "ISBN:0073040584"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (prearticular bone) AnnotationAssertion(Annotation( "AAO:0000458") "Osseous element of intramembranous origin that extends along the lingual margin of Meckel's cartilage.") AnnotationAssertion( ) AnnotationAssertion( "AAO:0000458") AnnotationAssertion(Annotation( "AAO:0000458") "prearticular") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011637") AnnotationAssertion(rdfs:label "prearticular bone") SubClassOf( ) SubClassOf(Annotation( "AAO"^^xsd:string) ) SubClassOf(Annotation( "mandibular series") Annotation( "ISBN:0073040584"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (pharyngeal arch 8) AnnotationAssertion( "8"^^xsd:nonNegativeInteger) AnnotationAssertion( "gill arch 6") AnnotationAssertion( "visceral arch 8") AnnotationAssertion( "uberon") AnnotationAssertion( "branchial arch 6") AnnotationAssertion( "UBERON:0011638") AnnotationAssertion(rdfs:label "pharyngeal arch 8") SubClassOf(Annotation( "TAO"^^xsd:string) ) # Class: (frontoparietal bone) AnnotationAssertion(Annotation( "AAO:0000207") "An anuran dermal bone that usually is paired and roofs the braincase.") AnnotationAssertion( "AAO:0000207") AnnotationAssertion(Annotation( "AAO:0000207") "frontoparietal") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "AAO:0000207") "fronto-parietaux") AnnotationAssertion(Annotation( "AAO:0000207") "os fronto-parietale") AnnotationAssertion(Annotation( "AAO:0000207") "parietaux") AnnotationAssertion(Annotation( "AAO:0000207") "parietofrontal") AnnotationAssertion( "UBERON:0011639") AnnotationAssertion(rdfs:label "frontoparietal bone") SubClassOf(Annotation( "AAO"^^xsd:string) ) SubClassOf(Annotation( "orbital series"^^xsd:string) Annotation( "ISBN:0073040584"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (palatoglossal arch) AnnotationAssertion(Annotation( ) Annotation( "ISBN:0073040584"^^xsd:string) "A fold that lies between the mouth and pharynx and marks the posterior border of the mouth.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:55024") AnnotationAssertion(Annotation( "FMA:55024") "anterior pillar of fauces") AnnotationAssertion(Annotation( ) "arcus glossopalatinus") AnnotationAssertion(Annotation( ) "arcus palatoglossus") AnnotationAssertion(Annotation( "FMA:55024") "glossopalatine arch") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) Annotation( ) "plica anterior faucium") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011640") AnnotationAssertion(rdfs:label "palatoglossal arch") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (odontogenic mesenchyme of molar) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An odontogenic papilla that is part of a molar tooth [Automatically generated definition].") AnnotationAssertion( "EMAPA:32881") AnnotationAssertion( "MA:0003230") AnnotationAssertion(Annotation( ) "molar mesenchyme") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "odontogenic mesenchyme of molar tooth") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011641") AnnotationAssertion(rdfs:label "odontogenic mesenchyme of molar") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (oral epithelium from ectoderm) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An epithelium that develops_from a ectoderm and is part of a oral epithelium.") AnnotationAssertion( "EHDAA2:0004137") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011642") AnnotationAssertion(rdfs:label "oral epithelium from ectoderm") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (puboischiofemoralis internus muscle) AnnotationAssertion(Annotation( "ISBN:0073040584"^^xsd:string) "A single large dorsal limb rotator muscle in lower tetrapods that runs from the lumber region and girdle to the femur.") AnnotationAssertion( "3 muscles differentiate from this: psoas, iliacus and pectineus.") AnnotationAssertion( "UBERON:0014843") AnnotationAssertion( "puboischiofemoralis internus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011643") AnnotationAssertion(rdfs:label "puboischiofemoralis internus muscle") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "ISBN:0073040584"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (puboischiofemoralis externus muscle) AnnotationAssertion(Annotation( "ISBN:0073040584"^^xsd:string) "A single large ventral muscle in lower tetrapods that runs from the pubis and ischium to the femur.") AnnotationAssertion( "obturator externus and quadratus femoris are derivatives") AnnotationAssertion( "UBERON:0014844") AnnotationAssertion( "puboischiofemoralis externus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011644") AnnotationAssertion(rdfs:label "puboischiofemoralis externus muscle") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (iliofemoralis muscle) AnnotationAssertion(Annotation( "ISBN:0073040584"^^xsd:string) "Limb extensor that runs from ilium to femur.") AnnotationAssertion( "iliofemoralis") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011645") AnnotationAssertion(rdfs:label "iliofemoralis muscle") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (depressor mandibulae muscle) AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000813") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0072528305 Kardong KV, Vertebrates: Comparative Anatomy, Function, Evolution (2006) p.398") "The depressor mandibulae of tetrapods, which opens the jaws, is the homologue of the levator operculi and epihyoidean. In mammals, the depressor mandibulae evolves into the stapedius (...).[well established][VHOG]") AnnotationAssertion(Annotation( ) "Homolog of levator operculi and epihyoidean - or in mammals, the stapedius (the digastric opens the jaws)[Kardong] The (sphenodon) m. Depressor Mandibulae originates from the posterodorsal edge of the parietal and squamosal, and from a small mid-line portion of connective tissue") AnnotationAssertion( "AAO:0010715") AnnotationAssertion( "VHOG:0000813") AnnotationAssertion( "depressor labi mandibularis") AnnotationAssertion( "depressor labi mandibularis muscle") AnnotationAssertion(Annotation( "AAO:0010715") "depressor mandibulae") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011647") AnnotationAssertion(rdfs:label "depressor mandibulae muscle") SubClassOf( ) SubClassOf(Annotation( "AAO"^^xsd:string) ) # Class: (jaw muscle) AnnotationAssertion( "AAO:0000247") AnnotationAssertion( "EFO:0003511") AnnotationAssertion( "TAO:0000236") AnnotationAssertion( "XAO:0003269") AnnotationAssertion( "ZFA:0000236") AnnotationAssertion(Annotation( "TAO:0000236") "mandibular muscle") AnnotationAssertion(Annotation( "TAO:0000236") Annotation( ) "mandibular muscles") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011648") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "jaw muscle") SubClassOf( ) # Class: (levator operculi) AnnotationAssertion(Annotation( "ZFA:0000537") "Hyoid muscle that originates at the ventrolateral margin of the pterotic and inserts in the dorsomesial edge of the opercle. The levator operculi is responible for jaw depression, its force of contraction is transmitted through the opercular series and the interoperculo-mandibular ligament to the lower jaw.") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000813") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0072528305 Kardong KV, Vertebrates: Comparative Anatomy, Function, Evolution (2006) p.398") "The depressor mandibulae of tetrapods, which opens the jaws, is the homologue of the levator operculi and epihyoidean. In mammals, the depressor mandibulae evolves into the stapedius (...).[well established][VHOG]") AnnotationAssertion( "TAO:0000537") AnnotationAssertion( "VHOG:0000813") AnnotationAssertion( "ZFA:0000537") AnnotationAssertion(Annotation( "ZFA:0000537") "levator operculae") AnnotationAssertion( "levator operculi muscle") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011649") AnnotationAssertion(rdfs:label "levator operculi") SubClassOf(Annotation( "ZFA"^^xsd:string) ) SubClassOf(Annotation( "ISBN:0073040584"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "ISBN:0073040584"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "Kardong") ObjectSomeValuesFrom( )) # Class: (ventral head of rib) AnnotationAssertion(Annotation( "AAO:0000723") "Ventral head of a bicapitate rib. It articulates with the parapophysis[AAO].") AnnotationAssertion(Annotation( "ISBN:0073040584"^^xsd:string) "Ribs of primitive tetrapods are bicipital (having two heads)") AnnotationAssertion( "AAO:0000723") AnnotationAssertion( "capitulum of costa") AnnotationAssertion(Annotation( "AAO:0000723") "capitulum of rib") AnnotationAssertion( "costal capitulum") AnnotationAssertion( "capitulum") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011651") AnnotationAssertion(rdfs:label "ventral head of rib") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (dorsal head of rib) AnnotationAssertion(Annotation( "AAO:0000722") "Dorsal head of a bicapitate rib. It articulates with the diapophysis[AAO].") AnnotationAssertion(Annotation( "ISBN:0073040584"^^xsd:string) "Ribs of primitive tetrapods are bicipital (having two heads)") AnnotationAssertion( "sometimes called the tuberculum, but not to be confused with the tubercle, which is between body and neck") AnnotationAssertion(Annotation( "AAO:0000722") "tuberculum") AnnotationAssertion( "AAO:0000722") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37734") AnnotationAssertion( "MA:0001414") AnnotationAssertion( "tuberculum of rib") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011652") AnnotationAssertion(rdfs:label "dorsal head of rib") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (diapophysis of neural arch) AnnotationAssertion(Annotation( "AAO:0000706") "Paired processes that arise near the midpoint of the neural arch lamina, for the attachment of the tuberculum of two-headed ribs. Also called transverse processes. In anurans, the term diapophysis is used in reference to the modified transverse processes of the sacral vertebra elaborated for support of the pelvic girdle.") AnnotationAssertion( "taken from AAO, requires attention of amphibian anatomy experts, in particular, relationship to transverse processes") AnnotationAssertion(Annotation( "AAO:0000706") "diapophysis") AnnotationAssertion(Annotation( "AAO:0000706") "transverse process") AnnotationAssertion( "AAO:0000706") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011653") AnnotationAssertion(rdfs:label "diapophysis of neural arch") SubClassOf( ) SubClassOf(Annotation( "ISBN:0073040584"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete nuchal plate of carapace) AnnotationAssertion( "UBERON:0011671") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011668") AnnotationAssertion(rdfs:label "obsolete nuchal plate of carapace") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (perichordal ring) AnnotationAssertion(Annotation( "ISBN:0073040584"^^xsd:string) "Enlarged section of perichordal tube that is arranged serially but out of phase with segmental musculature.") AnnotationAssertion( "AAO:0000738") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011675") AnnotationAssertion(rdfs:label "perichordal ring") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "AAO"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (subdivision of organism along main body axis) AnnotationAssertion(Annotation( ) "A major subdivision of an organism that divides an organism along its main body axis (typically anterio-posterior axis). In vertebrates, this is based on the vertebral column.") AnnotationAssertion( "Ideally this would be disjoint with analagous class for appendicular axes, but currently 'appendages' like antennae, horns cause a problem") AnnotationAssertion( "axial subdivision of organism") AnnotationAssertion( "uberon") AnnotationAssertion( "body segment") AnnotationAssertion( "main body segment") AnnotationAssertion( "UBERON:0011676") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "subdivision of organism along main body axis") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (trunk vertebra) AnnotationAssertion(Annotation( "UBERONREF:0000006") "A vertebra in the trunk region. For tetrapods, includes lumbar and thoracic vertebrae. Excludes caudal/coccygeal vertebra, which are located posteriorly. In tetrapods this includes thoracic, lumbar and sacral vertebrae, and excludes the cervical vertebrae, which are located anteriorly.") AnnotationAssertion( ) AnnotationAssertion( "thoracolumbar vertebra") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "presacral vertebra") AnnotationAssertion( "UBERON:0011677") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "trunk vertebra") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "true"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (hindlimb intermedium bone) AnnotationAssertion(Annotation( ) "A proximal tarsal bone that articulates with the fibula.") AnnotationAssertion( "The amphibian intermedium forms part of the astragalus in amniotes[http://www.science.marshall.edu/okeefef/PDFS/OKeefe_et_al_2006_JMorph.pdf]") AnnotationAssertion(Annotation( ) "intermedium") AnnotationAssertion( "AAO:0000923") AnnotationAssertion( "hidlimb intermedium") AnnotationAssertion(Annotation( "AAO:0000923") "intermedium (hind)") AnnotationAssertion(Annotation( ) "intermedium of pes") AnnotationAssertion(Annotation( ) "pedal intermedium") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011678") AnnotationAssertion(rdfs:label "hindlimb intermedium bone") SubClassOf( ) # Class: (proximal tarsal bone) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A tarsal bone that connected_to a hindlimb zeugopod skeleton.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011679") AnnotationAssertion(rdfs:label "proximal tarsal bone") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (adductor mandibulae) AnnotationAssertion(Annotation( ) Annotation( ) "An adductor muscle that acts on the jaw. In some species, this is subdivided into segments based on attachment.") AnnotationAssertion(Annotation( "ZFA:0007049") "Is a mandibular muscle that forms along the palatoquadrates and inserts on Meckel's cartilages and functions in jaw closing[ZFA:0007049].") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000698") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0030223693 Liem KF, Bemis WE, Walker WF, Grande L, Functional Anatomy of the Vertebrates: An Evolutionary Perspective (2001) p.333-334 and same reference Table 10-4") "The division of the adductor mandibulae in the various lines of tetrapod evolution correlates with divergences in their methods of feeding. (...) As the jaws become stronger and their movements more complex in the line of evolution toward mammals, the adductor complex becomes divided into several distinct muscles (temporalis, masseter, pterygoideus, tensor tympani, tensor veli palati).[well established][VHOG]") AnnotationAssertion(Annotation( "ISBN:0073040584"^^xsd:string) Annotation( "NCBITaxon:32443") "In teleosts, the complex is composed of several derived muscles that attach to different parts of the highly kinetic skull.") AnnotationAssertion( "EFO:0000227") AnnotationAssertion( "TAO:0007049") AnnotationAssertion( "ZFA:0007049") AnnotationAssertion(Annotation( "ZFA:0007049") "dorsal adductor mandibulae") AnnotationAssertion( "m. adductor mandibulae") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "EFO:0000227") Annotation( ) "adductor mandibulae complex") AnnotationAssertion( "levator mandibulae") AnnotationAssertion( "UBERON:0011683") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "adductor mandibulae") SubClassOf( ) SubClassOf(Annotation( "ZFA"^^xsd:string) ) SubClassOf( ) SubClassOf(Annotation( "ISBN:0073040584"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (levator palatoquadrati) AnnotationAssertion(Annotation( "ISBN:0073040584"^^xsd:string) "A muscle derivative of the mandibular levator that runs from the chondrocranium to the palatoquadrate cartilage. Found in sharks.") AnnotationAssertion( ) AnnotationAssertion(Annotation( "ISBN:0073040584"^^xsd:string) "In some fishes such as the chimera and in tetrapods the palatoquadrate becomes fused to the braincase and this muscle is absent.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011684") AnnotationAssertion(rdfs:label "levator palatoquadrati") SubClassOf(Annotation( "ISBN:0073040584"^^xsd:string) ) SubClassOf( ) SubClassOf(Annotation( "ISBN:0073040584"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (preorbitalis muscle) AnnotationAssertion(Annotation( "ISBN:0073040584"^^xsd:string) "A jaw muscle arises near the orbit and tapers as it passes posteriorly to its insertion on the adductor mandibulae. Found in sharks.") AnnotationAssertion( ) AnnotationAssertion( "preorbitalis") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011685") AnnotationAssertion(rdfs:label "preorbitalis muscle") SubClassOf(Annotation( "ISBN:0073040584"^^xsd:string) ) SubClassOf( ) SubClassOf(Annotation( "ISBN:0073040584"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "ISBN:0073040584"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (spiracularis muscle) AnnotationAssertion(Annotation( "Kardong") ) AnnotationAssertion( "spiracularis") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011686") AnnotationAssertion(rdfs:label "spiracularis muscle") SubClassOf(Annotation( "ISBN:0073040584"^^xsd:string) ) SubClassOf( ) SubClassOf(Annotation( "ISBN:0073040584"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (levator hyomandibulae muscle) AnnotationAssertion( "levator hyomandibulae") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011687") AnnotationAssertion(rdfs:label "levator hyomandibulae muscle") SubClassOf( ) SubClassOf(Annotation( "ISBN:0073040584"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "ISBN:0073040584"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (pre-enameloid) AnnotationAssertion(Annotation( ) Annotation( "GO_REF:0000034"^^xsd:string) Annotation( "PSPUB:0000170"^^xsd:string) Annotation( "VSAO:0000114") "Odontoid tissue that is avascular non-mineralized matrix that is deposited by odontoblasts and ameloblasts that are excluded from the matrix.") AnnotationAssertion( "VSAO:0000114") AnnotationAssertion( "XAO:0004203") AnnotationAssertion(Annotation( "VSAO:curator"^^xsd:string) "non-mineralized enameloid tissue") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011688") AnnotationAssertion(rdfs:label "pre-enameloid") SubClassOf(Annotation( "VSAO"^^xsd:string) ) # Class: (enameloid) AnnotationAssertion(Annotation( ) Annotation( "GO_REF:0000034"^^xsd:string) Annotation( "PSPUB:0000170"^^xsd:string) Annotation( "VSAO:0000113") "Skeletal tissue that is hypermineralized and aprismatic and deposited by a combination of ameloblasts and odontoblasts that are excluded from the matrix. Enameloid develops from pre-enameloid tissue.") AnnotationAssertion( "VHOG:0001565") AnnotationAssertion( "VSAO:0000113") AnnotationAssertion( "XAO:0004199") AnnotationAssertion( "ZFA:0005142") AnnotationAssertion(Annotation( "VSAO:curator"^^xsd:string) "bitypic enamel") AnnotationAssertion(Annotation( "VSAO:curator"^^xsd:string) "durodentine") AnnotationAssertion(Annotation( "VSAO:curator"^^xsd:string) "enameloid tissue") AnnotationAssertion(Annotation( "VSAO:curator"^^xsd:string) "vitrodentine") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011692") AnnotationAssertion(rdfs:label "enameloid") SubClassOf(Annotation( "VSAO"^^xsd:string) ) SubClassOf( ) SubClassOf(Annotation( "ZFA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "VSAO"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (extraembryonic portion of umbilical artery) AnnotationAssertion( "VHOG:0001157") AnnotationAssertion(Annotation( "VHOG:0001157") "extraembryonic umbilical artery") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011693") AnnotationAssertion(rdfs:label "extraembryonic portion of umbilical artery") SubClassOf(Annotation( "EHDAA2-abduced") ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2-abduced") ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (embryo portion of umbilical artery) AnnotationAssertion(Annotation( "VHOG:0000599") "Each of the two arteries arising from the hypogastric arteries of the fetus and passing throught the umbilical cord to the placenta.") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000599") Annotation( "VHOG"^^xsd:string) Annotation( ) "Each of the two arteries arising from the hypogastric arteries of the fetus and passing throught the umbilical cord to the placenta. [Dorian_AF, Elsevier's_encyclopaedic_dictionary_of_medicine, Part_B:_Anatomy_(1988)_Amsterdam_etc.:_Elsevier][VHOG]") AnnotationAssertion( "VHOG:0000599") AnnotationAssertion(Annotation( "VHOG:0000599") "embryonic umbilical artery") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011694") AnnotationAssertion(rdfs:label "embryo portion of umbilical artery") SubClassOf( ) # Class: (embryonic cardiovascular system) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A cardiovascular system that is part of a conceptus.") AnnotationAssertion( "EHDAA2:0000216") AnnotationAssertion( "FMA:305965") AnnotationAssertion( "NCIT:C34148") AnnotationAssertion( "conceptus cardiovascular system") AnnotationAssertion( "uberon") AnnotationAssertion( "embryonic circulatory system") AnnotationAssertion( "fetal circulatory system") AnnotationAssertion( "UBERON:0011695") AnnotationAssertion(rdfs:label "embryonic cardiovascular system") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (left extraembryonic umbilical artery) AnnotationAssertion( "EHDAA2:0000937") AnnotationAssertion(Annotation( "EHDAA2:0000937") "extraembryonic umbilical artery left") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011696") AnnotationAssertion(rdfs:label "left extraembryonic umbilical artery") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (right extraembryonic umbilical artery) AnnotationAssertion( "EHDAA2:0001721") AnnotationAssertion(Annotation( "EHDAA2:0001721") "extraembryonic umbilical artery right") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011697") AnnotationAssertion(rdfs:label "right extraembryonic umbilical artery") SubClassOf( ) # Class: (midgut loop) AnnotationAssertion(Annotation( ) "Portion of midgut after it bends around the superior mesenteric artery.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:17036") AnnotationAssertion( "NCIT:C34211") AnnotationAssertion(Annotation( "ncithesaurus:Midgut_Loop") "UMLS:C1513298") AnnotationAssertion( "VHOG:0000673") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011698") AnnotationAssertion(rdfs:label "midgut loop") SubClassOf( ) SubClassOf(Annotation( "VHOG"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (caudate lobe hepatic sinusoid) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A hepatic sinusoid that is part of a caudate lobe of liver.") AnnotationAssertion( "EHDAA2:0001006") AnnotationAssertion( "EHDAA:6992") AnnotationAssertion( "EMAPA:18314") AnnotationAssertion( "VHOG:0000711") AnnotationAssertion(Annotation( "EHDAA2:0001006") "liver right caudate lobe hepatic sinusoids") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011737") AnnotationAssertion(rdfs:label "caudate lobe hepatic sinusoid") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (quadrate lobe hepatic sinusoid) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A hepatic sinusoid that is part of a quadrate lobe of liver.") AnnotationAssertion( "EHDAA2:0001013") AnnotationAssertion( "EHDAA:8084") AnnotationAssertion( "EMAPA:18319") AnnotationAssertion( "VHOG:0000712") AnnotationAssertion(Annotation( "EHDAA2:0001013") "liver right quadrate lobe hepatic sinusoids") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011738") AnnotationAssertion(rdfs:label "quadrate lobe hepatic sinusoid") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (cardiac valve leaflet) AnnotationAssertion( "EMAPA:35903") AnnotationAssertion( "MA:0003179") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "MA:0003179") "valve leaflet") AnnotationAssertion( "UBERON:0011741") AnnotationAssertion(rdfs:label "cardiac valve leaflet") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (aortic valve leaflet) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A cardiac valve leaflet that is part of a aortic valve.") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000819") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "DOI:10.1161/CIRCRESAHA.109.201566 Combs MD, Yutzey KE, Heart valve development. Circulatory Research (2009)") "Extensive conservation of valve developmental mechanisms also has been observed among vertebrate species including chicken, mouse, and human.[uncertain][VHOG]") AnnotationAssertion( "EMAPA:18627") AnnotationAssertion( "VHOG:0000819") AnnotationAssertion(Annotation( "VHOG:0000819") "aortic valve leaflets") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011742") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "aortic valve leaflet") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "MP"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (pulmonary valve leaflets) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A cardiac valve leaflet that is part of a pulmonary valve.") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0000820") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "DOI:10.1161/CIRCRESAHA.109.201566 Combs MD, Yutzey KE, Heart valve development. Circulatory Research (2009)") "Extensive conservation of valve developmental mechanisms also has been observed among vertebrate species including chicken, mouse, and human.[uncertain][VHOG]") AnnotationAssertion( "EMAPA:18629") AnnotationAssertion( "VHOG:0000820") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011745") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "pulmonary valve leaflets") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (genital swelling) AnnotationAssertion(Annotation( ) "Paired structures in the embryo that represent the final stage of development of the caudal end of the external genitals before sexual differentiation. In both males and females the two swellings merge: in the female, they become the posterior labial commissure; In the male, they become the scrotum.") AnnotationAssertion( "todo - add parthood relationships to tubercles") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:30074") AnnotationAssertion( "EMAPA:35377") AnnotationAssertion( "VHOG:0000976") AnnotationAssertion( "labioscrotal swelling") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "tuberculum labioscrotale") AnnotationAssertion( "UBERON:0011754") AnnotationAssertion(rdfs:label "genital swelling") SubClassOf(Annotation( "EHDAA2"^^xsd:string) ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (female labial swelling) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A genital swelling that is part of a female reproductive system.") AnnotationAssertion(Annotation( "EMAPA:18329") "labial swelling") AnnotationAssertion( "EHDAA2:0000501") AnnotationAssertion( "EHDAA:9363") AnnotationAssertion( "EMAPA:18329") AnnotationAssertion( "EMAPA:30423") AnnotationAssertion(Annotation( "EMAPA:30423") "labioscrotal swelling of female") AnnotationAssertion( "uberon") AnnotationAssertion( "labial primordium") AnnotationAssertion( "UBERON:0011755") AnnotationAssertion(rdfs:label "female labial swelling") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (male genital swelling) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A genital swelling that is part of a male reproductive organ.") AnnotationAssertion( "EHDAA2:0001049") AnnotationAssertion( "EMAPA:30509") AnnotationAssertion(Annotation( "EMAPA:30509") "labioscrotal swelling of male") AnnotationAssertion( "scrotal bulge") AnnotationAssertion( "scrotal primordium") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011756") AnnotationAssertion(rdfs:label "male genital swelling") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (differentiated genital tubercle) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "NCIT:C34274") AnnotationAssertion(Annotation( "ncithesaurus:Primordial_Phallus") "UMLS:C1514448") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "phallus") AnnotationAssertion(Annotation( ) Annotation( ) "phallus primordialis") AnnotationAssertion(Annotation( ) "primordial phallus") AnnotationAssertion( "UBERON:0011757") AnnotationAssertion(rdfs:label "differentiated genital tubercle") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (jugular lymph sac) AnnotationAssertion(Annotation( ) Annotation( ) Annotation( "VHOG:0001000") "An embryonic lymph sac that forms at the junction of the future internal jugular/anterior cardinals and subclavian veins.") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001000") Annotation( "VHOG"^^xsd:string) Annotation( ) "Lymphatic vessels develop from lymph sacs that arise from developing veins, which are derived from mesoderm. The first lymph sacs to appear are the paired jugular lymph sacs at the junction of the internal jugular and subclavian veins. [Wikipedia:Lymphatic_system][VHOG]") AnnotationAssertion( "EMAPA:18249") AnnotationAssertion( "NCIT:C34196") AnnotationAssertion( "VHOG:0001000") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011765") AnnotationAssertion(rdfs:label "jugular lymph sac") SubClassOf( ) # Class: (left recurrent laryngeal nerve) AnnotationAssertion( "The left nerve is longer than the right, because it crosses under the arch of the aorta at the ligamentum arteriosum.[WP]") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:25350") AnnotationAssertion( "FMA:14469") AnnotationAssertion( "MA:0001107") AnnotationAssertion(Annotation( "EMAPA:25350") "left recurrent laryngeal branch") AnnotationAssertion(Annotation( "FMA:14469") "left recurrent laryngeal nerve") AnnotationAssertion(Annotation( "MA:0001107") "vagus X nerve left recurrent laryngeal branch") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011766") AnnotationAssertion(rdfs:label "left recurrent laryngeal nerve") AnnotationAssertion( "https://upload.wikimedia.org/wikipedia/commons/6/64/Recurrent_laryngeal_nerve.svg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (right recurrent laryngeal nerve) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:17275") AnnotationAssertion( "FMA:14468") AnnotationAssertion( "MA:0001108") AnnotationAssertion(Annotation( "EMAPA:17275") "right recurrent laryngeal branch") AnnotationAssertion(Annotation( "FMA:14468") "right recurrent laryngeal nerve") AnnotationAssertion(Annotation( "MA:0001108") "vagus X nerve right recurrent laryngeal branch") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011767") AnnotationAssertion(rdfs:label "right recurrent laryngeal nerve") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pineal gland stalk) AnnotationAssertion( "compare with habenula") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0001292") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "The stalk emanates from the diencephalic roof at a left-of-medial position.[TAO]") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0001292") Annotation( "TAO"^^xsd:string) "relationship loss: part_of pineal complex (TAO:0001359)[TAO]") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001360") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0471210054 Butler AB, Hodos W, Comparative vertebrate neuroanatomy: Evolution and Adaptation (2005) p.66") "The epithalamus contains the epiphysis (pineal gland and related structures), which is located at the end of a stalk, the epiphyseal stalk.[well established][VHOG]") AnnotationAssertion( ) AnnotationAssertion( "BAMS:PIS") AnnotationAssertion( "EMAPA:19036") AnnotationAssertion( "MBA:730") AnnotationAssertion( "TAO:0001292") AnnotationAssertion( "VHOG:0001360") AnnotationAssertion( "ZFA:0001292") AnnotationAssertion(Annotation( "ZFA:0001292") "epiphyseal stalk") AnnotationAssertion(Annotation( "TAO:0001292") "pineal stalk") AnnotationAssertion( "uberon") AnnotationAssertion( "habenula") AnnotationAssertion( "UBERON:0011768") AnnotationAssertion(rdfs:label "pineal gland stalk") SubClassOf( ) SubClassOf(Annotation( "EMAPA"^^xsd:string) Annotation( "VHOG"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (cartilaginous projection) AnnotationAssertion(Annotation( "VSAO:wd") "Anatomical projection that is composed of cartilage tissue.") AnnotationAssertion( "FMA:284626") AnnotationAssertion( "cartilage process") AnnotationAssertion( "cartilaginous process") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011769") AnnotationAssertion(rdfs:label "cartilaginous projection") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (mentomeckelian) AnnotationAssertion(Annotation( "AAO:0000301") "Paired, cylindrical, and small bones of endochondral origin that lie anteromedial to the anterior end of Meckel's cartilage. The precursors of the mentomeckelian bones are the larval infrarostral cartilages.") AnnotationAssertion( "AAO:0000301") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "AAO:0000301") "dentale") AnnotationAssertion(Annotation( "AAO:0000301") "pars mentalis") AnnotationAssertion( "UBERON:0011770") AnnotationAssertion(rdfs:label "mentomeckelian") SubClassOf(Annotation( "AAO"^^xsd:string) ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete larval structure) AnnotationAssertion(Annotation( "AAO:0000265") "Anatomical structure that is part of the larva.") AnnotationAssertion( "AAO:0000265") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011771") AnnotationAssertion(rdfs:comment "Obsolete term in XAO - XAO:0003058") AnnotationAssertion(rdfs:label "obsolete larval structure") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (lower jaw opening) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An anatomical space that is part of a bone of lower jaw.") AnnotationAssertion( "AAO:0000273") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011772") AnnotationAssertion(rdfs:label "lower jaw opening") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (upper jaw opening) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An anatomical space that is part of a bone of upper jaw.") AnnotationAssertion( "AAO:0000621") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011773") AnnotationAssertion(rdfs:label "upper jaw opening") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (utriculosaccular duct) AnnotationAssertion(Annotation( ) "A duct connecting the the utricle to the saccule in the membranous labyrinth of the ear.") AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37980") AnnotationAssertion( "FMA:61243") AnnotationAssertion( "NCIT:C33845") AnnotationAssertion(Annotation( ) "Böttcher's canal") AnnotationAssertion(Annotation( "FMA:61243") "ductus utricosaccularis") AnnotationAssertion( "utricosaccular duct") AnnotationAssertion(Annotation( "FMA:61243") "utricosaccular duct of membranous labyrinth") AnnotationAssertion( "utriculo-saccular duct") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011774") AnnotationAssertion(rdfs:comment "Alternate: leads from the utricle of the internal ear to the endolymphatic duct. - http://medical-dictionary.thefreedictionary.com/utriculosaccular+duct. We assume a 3-way connection") AnnotationAssertion(rdfs:label "utriculosaccular duct") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "MP"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (vagus nerve nucleus) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A cranial nerve nucleus that is associated with a vagus nerve.") AnnotationAssertion( ) AnnotationAssertion( "FMA:54573") AnnotationAssertion( "nucleus of Xth nerve") AnnotationAssertion( "nucleus of vagal X nerve") AnnotationAssertion( "nucleus of vagal nerve") AnnotationAssertion(Annotation( "FMA:54573") "nucleus of vagus nerve") AnnotationAssertion(Annotation( "FMA:54573") "tenth cranial nerve nucleus") AnnotationAssertion(Annotation( ) "vagal X nucleus") AnnotationAssertion(Annotation( ) "vagal nucleus") AnnotationAssertion(Annotation( ) "vagus nucleus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "nodosal nucleus") AnnotationAssertion( "UBERON:0011775") AnnotationAssertion(rdfs:label "vagus nerve nucleus") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (dorsal commissural nucleus of spinal cord) AnnotationAssertion(Annotation( ) "A continuous column of gray matter along the midline in the dorsal gray commissure that sends fibers to the hypogastric nerve.") AnnotationAssertion( "The DCN may be species-specific and related to the system of short adrenergic neurons present in the pelvis.") AnnotationAssertion(Annotation( "MA:0001128") "spinal cord dorsal commissural nucleus") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37748") AnnotationAssertion( "MA:0001128") AnnotationAssertion( "NLX:144463") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011776") AnnotationAssertion(rdfs:label "dorsal commissural nucleus of spinal cord") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (nucleus of spinal cord) AnnotationAssertion(Annotation( ) "A neural nucleus that is part of the spinal cord.") AnnotationAssertion( "FMA:77011") AnnotationAssertion(Annotation( "FMA:77011") "spinal cord nucleus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011777") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "nucleus of spinal cord") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (motor nucleus of vagal nerve) AnnotationAssertion( "in ZFA this is the superclass of dorsolateral and medial (which have not been generalized above ZFA). In this ontology it is a broad grouping class covering these zebrafish structures as well as the generalized dorsal motor nucleus") AnnotationAssertion(Annotation( "ZFA:0000387") "nX") AnnotationAssertion( "ZFA:0000387") AnnotationAssertion(Annotation( "ZFA:0000387") "motor nucleus X") AnnotationAssertion(Annotation( "ZFA:0000387") "motor nucleus of X") AnnotationAssertion(Annotation( "ZFA:0000387") Annotation( ) "nucleus motorius of nervi vagi") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "ZFA:0000387") "vagal lobe") AnnotationAssertion( "UBERON:0011778") AnnotationAssertion(rdfs:label "motor nucleus of vagal nerve") SubClassOf( ) # Class: (nerve of head region) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A nerve that is part of a head.") AnnotationAssertion( "uberon") AnnotationAssertion( "cephalic nerve") AnnotationAssertion( "head nerve") AnnotationAssertion( "UBERON:0011779") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "nerve of head region") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (non-neurogenic ectodermal placode) AnnotationAssertion(Annotation( ) Annotation( ) "Ectodermal placode that does not develop into a component of the nervous system.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011814") AnnotationAssertion(rdfs:label "non-neurogenic ectodermal placode") SubClassOf(Annotation( "cjm"^^xsd:string) ) # Class: (skin appendage placode) AnnotationAssertion(Annotation( ) "An ectodermal placode that gives rise to any of the cutaneous appendages that protrude from the skin epidermis (heair, feathers, epidermal scales).") AnnotationAssertion( "cutaneous appendage follicle placode") AnnotationAssertion( "skin follicle placode") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011817") AnnotationAssertion(rdfs:label "skin appendage placode") SubClassOf( ) SubClassOf(Annotation( "NCBIBook:NBK53175"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (superficial fascia) AnnotationAssertion(Annotation( ) "Superficial fascia is found in the subcutis in most regions of the body, blending with the reticular layer of the dermis. It is present on the face, over the upper portion of the sternocleidomastoid, at the nape of the neck, and overlying the sternum. It is comprised mainly of loose areolar connective tissue and adipose and is the layer that primarily determines the shape of a body. In addition to its subcutaneous presence, this type of fascia surrounds organs and glands, neurovascular bundles, and is found at many other locations where it fills otherwise unoccupied space. It serves as a storage medium of fat and water; as a passageway for lymph, nerve and blood vessels; and as a protective padding to cushion and insulate. Superficial fascia is present, but does not contain fat, in the eyelids, ear, scrotum, penis and clitoris.") AnnotationAssertion(Annotation( "FMA"^^xsd:string) "we follow FMA, BTO, NCIT and WP in making this a distinct class from hypodermis.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0004525") AnnotationAssertion( "FMA:9630") AnnotationAssertion( "GAID:929") AnnotationAssertion( "MESH:D040521") AnnotationAssertion( "NCIT:C33660") AnnotationAssertion(Annotation( "FMA:9630") "subcutaneous tissue") AnnotationAssertion( "superficial fascial layer") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) Annotation( ) "tela subcutanea") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011818") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "superficial fascia") SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (lumen of atrioventricular canal) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A tube lumen that is part of a atrioventricular canal.") AnnotationAssertion( "EHDAA2:0000152") AnnotationAssertion( "AVC lumen") AnnotationAssertion( "cavity of atrioventricular canal") AnnotationAssertion( "lumen of AVC") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011819") AnnotationAssertion(rdfs:label "lumen of atrioventricular canal") SubClassOf(Annotation( "EHDAA2"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (atrioventricular region) AnnotationAssertion(Annotation( ) "An anatomical junction that divides and overlaps with and atrium and a ventricle in the heart.") AnnotationAssertion( "EHDAA2:0004149") AnnotationAssertion( "FMA:85125") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "AV region") AnnotationAssertion(Annotation( ) "AV segment") AnnotationAssertion(Annotation( "GO:0003294") "atrial ventricular junction") AnnotationAssertion(Annotation( "FMA:85125") Annotation( "GO:0003294") "atrioventricular junction") AnnotationAssertion(Annotation( ) "atrioventricular segment") AnnotationAssertion( "UBERON:0011820") AnnotationAssertion(rdfs:label "atrioventricular region") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (irregular connective tissue) AnnotationAssertion(Annotation( "FMA:20107") "Connective tissue, which consists of a population of connective tissue cells, the intercellular matrix of which contains an irregular network of collagen and elastic fiber bundles. Examples: areolar tissue, mucoid tissue, connective tissue of peritoneum, connective tissue of fibrous pericardium.") AnnotationAssertion( "FMA:20107") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011821") AnnotationAssertion(rdfs:label "irregular connective tissue") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (dense irregular connective tissue) AnnotationAssertion(Annotation( ) Annotation( "FMA:20109") "Irregular connective tissue is an irregular connective tissue, the intercellular matrix of which contains a dense irregular network of collagen and elastic fiber bundles. Examples: connective tissue of peritoneum, connective tissue of fibrous pericardium.") AnnotationAssertion(Annotation( "2012-08-29") Annotation( "ncithesaurus:Irregular_Dense_Connective_Tissue") Annotation( "NCIT") "Tissue characterized by a thick, random arrangement of collagen and elastin fibers with very few cells. The majority of the cells are fibroblasts, but mast cells and macrophages may also be seen. It is found in the dermis, periosteum, perichondrium, capsules of organs and sheaths of nerves and muscles[NCIT]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:20109") AnnotationAssertion( "NCIT:C32882") AnnotationAssertion(Annotation( "ncithesaurus:Irregular_Dense_Connective_Tissue") "UMLS:C0738366") AnnotationAssertion( "irregular dense connective tissue") AnnotationAssertion(Annotation( "FMA:20109") "typus irregularis (textus connectivus collagenosus compactus)") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011822") AnnotationAssertion(rdfs:label "dense irregular connective tissue") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ) # Class: (dense connective tissue) AnnotationAssertion(Annotation( ) "Dense connective tissue is mainly composed of collagen type I. Crowded between the collagen fibers are rows of fibroblasts, fiber-forming cells, that manufacture the fibers. Dense connective tissue forms strong, rope-like structures such as tendons and ligaments. Tendons attach skeletal muscles to bones; ligaments connect bones to bones at joints. Ligaments are more stretchy and contain more elastic fibers than tendons. Dense connective tissue also make up the lower layers of the skin (dermis), where it is arranged in sheets.") AnnotationAssertion( "our OWL definition states that this is differentiated from other connective tissue types by virtue of the fact that the collage fiber component predominates, as opposed to cells and fluid.") AnnotationAssertion(Annotation( "2012-08-29") Annotation( "ncithesaurus:Dense_Connective_Tissue") Annotation( "NCIT") "Connective tissue in which the fibrous component predominates. The cells, ground substance, and tissue fluid represent a minor component[NCIT]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0000121") AnnotationAssertion( "NCIT:C32450") AnnotationAssertion(Annotation( "ncithesaurus:Dense_Connective_Tissue") "UMLS:C1511770") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011823") AnnotationAssertion(rdfs:label "dense connective tissue") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses( ) # Class: (fibrous connective tissue) AnnotationAssertion( ) AnnotationAssertion( "FMA:75634") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011824") AnnotationAssertion(rdfs:label "fibrous connective tissue") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (loose connective tissue) AnnotationAssertion(Annotation( "FMA:19783") "Irregular connective tissue, the intercellular matrix of which contains a sparse irregular network of collagen and elastic fiber bundles. Examples: areolar tissue, neuroglial tissue, mucoid tissue.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:19783") AnnotationAssertion( "NCIT:C33007") AnnotationAssertion(Annotation( "ncithesaurus:Loose_Connective_Tissue") "UMLS:C1253917") AnnotationAssertion(Annotation( "FMA:19783") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "textus connectivus collagenosus laxus") AnnotationAssertion(Annotation( "FMA:19783") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "textus connectivus laxus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011825") AnnotationAssertion(rdfs:label "loose connective tissue") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (vestibular gland) AnnotationAssertion(Annotation( ) Annotation( "FMA:20020") "Lobular organ the parenchyma of which consists of glandular acini which communicate with the vestibule of vagina. Examples: right vestibular gland, lesser vestibular gland.") AnnotationAssertion( ) AnnotationAssertion( "FMA:20020") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011826") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "vestibular gland") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (areolar gland) AnnotationAssertion(Annotation( ) "A sebaceous glands in the areola surrounding the nipple.") AnnotationAssertion(Annotation( "FMA:58090") "Lobular organ the parenchyma of which consists of acini connected to the surface of the areola or to a lactiferous duct by the duct of areolar gland. Examples: There are variable numbers of areolar glands[FMA:58090].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37668") AnnotationAssertion( "FMA:58090") AnnotationAssertion( "MA:0000794") AnnotationAssertion( "NCIT:C92833") AnnotationAssertion(Annotation( "ncithesaurus:Montgomery_s_Tubercle") "UMLS:C0929386") AnnotationAssertion( "Montgomery's gland") AnnotationAssertion(Annotation( "FMA:58090") "accessory gland of Montgomery") AnnotationAssertion(Annotation( "FMA:58090") "accessory gland of breast") AnnotationAssertion( "gland of Montgomery") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "MA:0000794") "mammary gland sebaceous gland") AnnotationAssertion( "UBERON:0011827") AnnotationAssertion(rdfs:label "areolar gland") AnnotationAssertion(rdfs:seeAlso "https://sourceforge.net/p/obo/mouse-anatomy-requests/80/"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (areolar tubercle) AnnotationAssertion( "FMA:58091") AnnotationAssertion( "Montgomery tubercle") AnnotationAssertion( "Montgomery's tubercle") AnnotationAssertion( "tubercle of Montgomery") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011828") AnnotationAssertion(rdfs:label "areolar tubercle") SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) # Class: (duct of lesser vestibular gland) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A duct that is part of a minor vestibular gland.") AnnotationAssertion( "FMA:20094") AnnotationAssertion(Annotation( "FMA:20094") "lesser vestibular gland duct") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011830") AnnotationAssertion(rdfs:label "duct of lesser vestibular gland") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (duct of vestibular gland) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A duct that is part of a vestibular gland.") AnnotationAssertion( "FMA:20097") AnnotationAssertion(Annotation( "FMA:20097") "vestibular gland duct") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011831") AnnotationAssertion(rdfs:label "duct of vestibular gland") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (duct of areolar gland) AnnotationAssertion( "FMA:67744") AnnotationAssertion(Annotation( "FMA:67744") "areolar gland duct") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011844") AnnotationAssertion(rdfs:label "duct of areolar gland") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (duct of sebaceous gland) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A duct that is part of a sebaceous gland.") AnnotationAssertion( "FMA:70947") AnnotationAssertion( "NCIT:C33520") AnnotationAssertion(Annotation( "FMA:70947") "sebaceous gland duct") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011845") AnnotationAssertion(rdfs:label "duct of sebaceous gland") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (acinus of sebaceous gland) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An acinus that is part of a sebaceous gland.") AnnotationAssertion( "FMA:59657") AnnotationAssertion(Annotation( "FMA:59657") "sebaceous gland acinus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011846") AnnotationAssertion(rdfs:label "acinus of sebaceous gland") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (acinus of parotid gland) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An acinus that is part of a parotid gland.") AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37933") AnnotationAssertion( "FMA:59863") AnnotationAssertion(Annotation( "FMA:59863") "parotid gland acinus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011847") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "acinus of parotid gland") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (acinus of salivary gland) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An acinus that is part of a salivary gland.") AnnotationAssertion( "FMA:59870") AnnotationAssertion(Annotation( "FMA:59870") "salivary gland acinus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011850") AnnotationAssertion(rdfs:label "acinus of salivary gland") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (acinus of areolar gland) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An acinus that is part of a areolar gland.") AnnotationAssertion( "FMA:62081") AnnotationAssertion(Annotation( "FMA:62081") "areolar gland acinus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011854") AnnotationAssertion(rdfs:label "acinus of areolar gland") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (acinus of lactiferous gland) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An acinus that is part of a mammary gland.") AnnotationAssertion( "FMA:74438") AnnotationAssertion(Annotation( "FMA:74438") "lactiferous gland acinus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011856") AnnotationAssertion(rdfs:label "acinus of lactiferous gland") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (acinus of lacrimal gland) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An acinus that is part of a lacrimal gland.") AnnotationAssertion( "FMA:85250") AnnotationAssertion(Annotation( "FMA:85250") "lacrimal gland acinus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011857") AnnotationAssertion(rdfs:label "acinus of lacrimal gland") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (acinus of exocrine gland) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An acinus that is part of a exocrine gland.") AnnotationAssertion( "exocrine gland acinus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011858") AnnotationAssertion(rdfs:label "acinus of exocrine gland") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (internal acoustic meatus) AnnotationAssertion(Annotation( ) "The internal auditory meatus (also internal acoustic meatus, internal auditory canal, and internal acoustic canal) is a canal in the petrous bone of the temporal bone of the skull that carries nerves from inside the cranium towards the middle and inner ear compartments namely cranial nerve VII and cranial nerve VIII.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:53163") AnnotationAssertion( "NCIT:C95443") AnnotationAssertion(Annotation( "ncithesaurus:Internal_Auditory_Canal_of_Ear") "UMLS:C0149591") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "internal acoustic canal") AnnotationAssertion(Annotation( ) "internal acoustic meatus") AnnotationAssertion(Annotation( ) "internal auditory canal") AnnotationAssertion(Annotation( ) "internal auditory meatus") AnnotationAssertion(Annotation( ) "porus acusticus internus") AnnotationAssertion( "UBERON:0011859") AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "Alternate def: The internal acoustic meatus (or internal auditory meatus ) is an opening on the medial surface of the petrous temporal bone. It is through this passageway that the facial nerve (cranial nerve VII) and vestibulocochlear nerve (cranial nerve VIII) pass to reach their sites of innervation. The vestibulocochlear nerve divides at the internal acoustic meatus to continue as separate vestibular and cochlear components. [MURDOCH:908]") AnnotationAssertion(rdfs:label "internal acoustic meatus") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "MP"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (collection of collagen fibrils) AnnotationAssertion(Annotation( "FMA"^^xsd:string) "the FMA class specifically refers to ureter") AnnotationAssertion( "FMA:63212") AnnotationAssertion( "MESH:D024022") AnnotationAssertion( "NCIT:C32339") AnnotationAssertion( "NIF_Subcellular:sao7547390221") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011860") AnnotationAssertion(rdfs:label "collection of collagen fibrils") AnnotationAssertion(rdfs:seeAlso ) SubClassOf(Annotation( "ZFA"^^xsd:string) ) # Class: (aorta collagen fibril) AnnotationAssertion(Annotation( "MP:0011640") "The connective tissue bundles in the extracellular matrix of aorta tissue that are composed of collagen, and play a role in tissue strength and elasticity.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011861") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "aorta collagen fibril") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pulmonary collagen fibril) AnnotationAssertion(Annotation( "MP:0011641") "The connective tissue bundles in the extracellular matrix of pulmonary tissue that are composed of collagen, and play a role in tissue strength and elasticity.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011862") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "pulmonary collagen fibril") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (bone collagen fibril) AnnotationAssertion(Annotation( "MP:0011642") "The connective tissue bundles in the extracellular matrix of bone tissue that are composed of collagen, and play a role in tissue strength and elasticity.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011863") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "bone collagen fibril") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (tendon collagen fibril) AnnotationAssertion(Annotation( "MP:0011643") "The connective tissue bundles in the extracellular matrix of tendon tissue that are composed of collagen, and play a role in tissue strength and elasticity.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011864") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "tendon collagen fibril") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (corneal stroma collagen fibril) AnnotationAssertion(Annotation( "MP:0011650") "The connective tissue bundles in the extracellular matrix of corneal stroma that are composed of collagen, and play a role in tissue strength and elasticity.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011865") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "corneal stroma collagen fibril") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (condylar joint) AnnotationAssertion(Annotation( ) "In a condyloid joint (condyloid articulation, ellipsoidal joint) an ovoid articular surface, or condyle, is received into an elliptical cavity. This permits movement in two planes, allowing flexion, extension, adduction, abduction, and circumduction.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:75300") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "articulatio ellipsoidea") AnnotationAssertion(Annotation( ) "condylar joint") AnnotationAssertion(Annotation( ) "condyloid") AnnotationAssertion(Annotation( ) "condyloid articulation") AnnotationAssertion(Annotation( ) "condyloid joints") AnnotationAssertion(Annotation( ) "ellipsoidal joint") AnnotationAssertion( "UBERON:0011866") AnnotationAssertion(rdfs:label "condylar joint") SubClassOf( ) # Class: (extensor carpi radialis muscle) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:36187") AnnotationAssertion( "extensor carpi radialis") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011867") AnnotationAssertion(rdfs:label "extensor carpi radialis muscle") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (midcarpal joint) AnnotationAssertion(Annotation( ) Annotation( ) "An intercarpal that connects a proximal and distal carpal bone.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:35293") AnnotationAssertion(Annotation( ) Annotation( ) "articulatio mediocarpalis") AnnotationAssertion(Annotation( "FMA:35293") "transverse carpal joint") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011868") AnnotationAssertion(rdfs:label "midcarpal joint") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pisiform joint) AnnotationAssertion( ) AnnotationAssertion( "FMA:73126") AnnotationAssertion(Annotation( ) Annotation( ) "articulatio ossis pisiformis") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011869") AnnotationAssertion(rdfs:comment "Wikipedia says pisiform and triquetral- todo check pisotriquetral") AnnotationAssertion(rdfs:label "pisiform joint") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pisotriquetral joint) AnnotationAssertion( "FMA:42318") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011870") AnnotationAssertion(rdfs:comment "See notes for pisiform") AnnotationAssertion(rdfs:label "pisotriquetral joint") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (nasomaxillary suture) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A cranial suture that connects a nasal bone and connects a maxilla.") AnnotationAssertion( "FMA:52960") AnnotationAssertion(Annotation( "FMA:52960") "nasomaxillary suture of skull") AnnotationAssertion( "uberon") AnnotationAssertion( "articulation of the nasal bone with maxilla") AnnotationAssertion( "UBERON:0011871") AnnotationAssertion(rdfs:label "nasomaxillary suture") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (synarthrosis) AnnotationAssertion(Annotation( ) "A synarthrosis is a type of joint which permits very little or no movement under normal conditions. Most synarthrosis joints are fibrous. Suture joints and synchondroses are synarthroses.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "NCIT:C33716") AnnotationAssertion(Annotation( "ncithesaurus:Synarthrosis") "UMLS:C0699803") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "synarthrodial") AnnotationAssertion(Annotation( ) "synarthrodial joint") AnnotationAssertion(Annotation( ) "synarthroses") AnnotationAssertion( "UBERON:0011873") AnnotationAssertion(rdfs:label "synarthrosis") SubClassOf( ) # Class: (amphiarthrosis) AnnotationAssertion(Annotation( ) "Amphiarthrosis is a type of continuous, slightly movable joint.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:76693") AnnotationAssertion( "NCIT:C32061") AnnotationAssertion(Annotation( "ncithesaurus:Amphiarthrosis") "UMLS:C0224520") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "amphiarthrodial") AnnotationAssertion(Annotation( ) "amphiarthroses") AnnotationAssertion( "UBERON:0011874") AnnotationAssertion(rdfs:label "amphiarthrosis") SubClassOf( ) # Class: (ligament of sternoclavicular joint) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A skeletal ligament that is part of a sternoclavicular joint.") AnnotationAssertion( ) AnnotationAssertion( "FMA:63980") AnnotationAssertion(Annotation( ) "ligamentum sternoclavicularis") AnnotationAssertion(Annotation( "FMA:63980") "sternoclavicular joint ligament") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011875") AnnotationAssertion(rdfs:label "ligament of sternoclavicular joint") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (body of tongue) AnnotationAssertion(Annotation( ) "The oral part of the tongue anterior to the terminal sulcus.") AnnotationAssertion( ) AnnotationAssertion( "FMA:54641") AnnotationAssertion(Annotation( ) Annotation( ) "corpus linguae") AnnotationAssertion(Annotation( "FMA:54641") "tongue body") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011876") AnnotationAssertion(rdfs:label "body of tongue") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (margin of tongue) AnnotationAssertion(Annotation( ) "The lateral border that separates the dorsum from the inferior surface of the tongue on each side, the two borders meeting anteriorly at the apex..") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:54650") AnnotationAssertion(Annotation( ) Annotation( ) "margo linguae") AnnotationAssertion(Annotation( "FMA:54650") "tongue margin") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011877") AnnotationAssertion(rdfs:label "margin of tongue") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (muscle layer of esophagus) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A muscle layer that is part of a wall of esophagus.") AnnotationAssertion(Annotation( "WP"^^xsd:string) "In the upper esophagus, part of the externa is skeletal muscle, rather than smooth muscle") AnnotationAssertion( "FMA:62998") AnnotationAssertion(Annotation( "FMA:62998") "muscle coat of esophagus") AnnotationAssertion(Annotation( "FMA:62998") "muscular coat of oesophagus") AnnotationAssertion(Annotation( "FMA:62998") "muscular layer of oesophagus") AnnotationAssertion(Annotation( "FMA:62998") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "tela muscularis (oesophagus)") AnnotationAssertion(Annotation( ) "tunica muscularis esophagi") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) Annotation( ) "tunica muscularis oesophageae") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011878") AnnotationAssertion(rdfs:label "muscle layer of esophagus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (mesorchium) AnnotationAssertion(Annotation( ) "The testes, at an early period of fetal life, are placed at the back part of the abdominal cavity, behind the peritoneum, and each is attached by a peritoneal fold, the mesorchium, to the mesonephros.") AnnotationAssertion( ) AnnotationAssertion( "AAO:0010530") AnnotationAssertion( "EMAPA:17971") AnnotationAssertion( "MA:0003238") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "EMAPA:17971") "testis mesentery") AnnotationAssertion( "UBERON:0011879") AnnotationAssertion(rdfs:label "mesorchium") SubClassOf(Annotation( "AAO"^^xsd:string) ) SubClassOf( ) SubClassOf(Annotation( "EMAPA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (anterior uvea) AnnotationAssertion(Annotation( "MP:0005194") "Front (ventral) portion of the vascular, pigmentary, or middle coat of the eye, including the ciliary body and the iris.") AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37417") AnnotationAssertion(Annotation( "MP:0005194") "Haller tunica vascula") AnnotationAssertion( "anterior part of uveal tract") AnnotationAssertion( "anterior uveal tract") AnnotationAssertion( "anterior vascular layer of the eyeball") AnnotationAssertion( "anterior vascular tunic of the eye") AnnotationAssertion(Annotation( "MP:0005194") "tunica vasculosa bulbosa") AnnotationAssertion( "ventral uveal tract") AnnotationAssertion( "uberon") AnnotationAssertion( "ciliary body and iris") AnnotationAssertion(Annotation( "MP:0005194") "vasculosa oculi") AnnotationAssertion( "UBERON:0011892") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "anterior uvea") SubClassOf(Annotation( "ZFA"^^xsd:string) ) SubClassOf( ) SubClassOf(Annotation( "MP"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (endoneurial fluid) AnnotationAssertion(Annotation( "MGI:llw2") Annotation( "MP:0003633") "Fluid of the ganglia and peripheral nerves that lie outside the brain and spinal cord.") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37850") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011893") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "endoneurial fluid") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lumen of vagina) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An organ cavity that is part of a vagina.") AnnotationAssertion( "FMA:19982") AnnotationAssertion(Annotation( "FMA:19982") "vaginal lumen") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011894") AnnotationAssertion(rdfs:label "lumen of vagina") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (endomysium) AnnotationAssertion(Annotation( ) "A layer of connective tissue that ensheaths a muscle fiber and is composed mostly from reticular fibers. It also contains capillaries, nerves and lymphatics. The term cardiac skeleton is sometimes considered synonymous with endomysium, but sometimes it refers to the combination of the endomysium and perimysium.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:9729") AnnotationAssertion( "NCIT:C32517") AnnotationAssertion(Annotation( "ncithesaurus:Endomysium") "UMLS:C0504097") AnnotationAssertion(Annotation( "FMA:9729") "fascia of muscle fiber") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011895") AnnotationAssertion(rdfs:label "endomysium") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (smooth muscle endomysium) AnnotationAssertion(Annotation( ) "Reticular tissue which surrounds a smooth muscle cell.") AnnotationAssertion( "FMA:260651") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011896") AnnotationAssertion(rdfs:label "smooth muscle endomysium") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (cardiac endomysium) AnnotationAssertion(Annotation( "FMA:83112") "Reticular tissue which surrounds a cardiac myocyte.") AnnotationAssertion( "FMA:83112") AnnotationAssertion(Annotation( "FMA:83112") "endomysium of cardiac muscle cell") AnnotationAssertion(Annotation( "FMA:83112") "fibrocollagenous sheath of cardiac muscle cell") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011897") AnnotationAssertion(rdfs:label "cardiac endomysium") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (skeletal muscle endomysium) AnnotationAssertion(Annotation( "FMA:86022") "Reticular tissue which surrounds a skeletal muscle cell.") AnnotationAssertion( "FMA:86022") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011898") AnnotationAssertion(rdfs:label "skeletal muscle endomysium") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (epimysium) AnnotationAssertion(Annotation( ) "Epimysium is a layer of connective tissue which ensheaths the entire muscle. It is composed of dense irregular connective tissue. It is continuous with fascia and other connective tissue wrappings of muscle including the endomysium, and perimysium. It is also continuous with tendons where it becomes thicker and collagenous.") AnnotationAssertion( "The Epimysium also protects muscles from friction against other muscles and bones") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:9726") AnnotationAssertion( "NCIT:C32527") AnnotationAssertion(Annotation( "ncithesaurus:Epimysium") "UMLS:C0504096") AnnotationAssertion(Annotation( "FMA:9726") "fascia of muscle organ") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "epimysia") AnnotationAssertion( "UBERON:0011899") AnnotationAssertion(rdfs:label "epimysium") SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (perimysium) AnnotationAssertion(Annotation( ) Annotation( ) "The fibrous sheath enveloping each of the primary bundles of skeletal muscle fibers.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:9728") AnnotationAssertion( "NCIT:C33299") AnnotationAssertion(Annotation( "ncithesaurus:Perimysium") "UMLS:C0224087") AnnotationAssertion(Annotation( "FMA:9728") "fascia of muscle fasciculus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011900") AnnotationAssertion(rdfs:label "perimysium") SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (hair matrix) AnnotationAssertion( "FMA:70945") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011901") AnnotationAssertion(rdfs:comment "The hair matrix surrounds the top and sides of the dermal papilla. The hair matrix cells give rise to 6 different types of cells that make up the different layers of the hair shaft and the inner root sheath.") AnnotationAssertion(rdfs:label "hair matrix") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (gastrolith) AnnotationAssertion(Annotation( ) "A rock held inside a gastrointestinal tract.") AnnotationAssertion( ) AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "gizzard stone") AnnotationAssertion(Annotation( ) "stomach stone") AnnotationAssertion( "UBERON:0011904") AnnotationAssertion(rdfs:label "gastrolith") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (plantaris) AnnotationAssertion(Annotation( ) "Plantaris is a vestigial structure and one of the superficial muscles of the posterior crural compartment of the leg. It is innervated by the tibial nerve (S1, S2) . It is composed of a thin muscle belly and a long thin tendon. It is approximately 2-4 inches long, and is absent in 7 - 10% of the human population. It is one of the plantar flexors in the superior compartment of the leg along with the gastrocnemius, and soleus. The plantaris is considered an unimportant muscle, it mainly acts with gastrocnemius[WP].") AnnotationAssertion( "todo - coordinate with phenoscape-ext on representation of amphibian plantaris longus and profundus") AnnotationAssertion( ) AnnotationAssertion( "EFO:0001979") AnnotationAssertion( "EMAPA:36254") AnnotationAssertion( "FMA:22543") AnnotationAssertion(Annotation( ) "musculus plantaris") AnnotationAssertion(Annotation( "FMA:22543") "plantaris") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011905") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "plantaris") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "Lateral supracondylar ridge of femur above lateral head of gastrocnemius") ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (muscle head) AnnotationAssertion( "FMA:85453") AnnotationAssertion(Annotation( "FMA:85453") "caput (musculus)") AnnotationAssertion(Annotation( "FMA:85453") "caput musculi") AnnotationAssertion(Annotation( "FMA:85453") "head of muscle organ") AnnotationAssertion(Annotation( "FMA:85453") "muscular organ head") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:85453") "proximal myotendinous region of muscle organ") AnnotationAssertion( "UBERON:0011906") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "muscle head") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (gastrocnemius medialis) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:36250") AnnotationAssertion( "FMA:45956") AnnotationAssertion(Annotation( "FMA:45956") "caput mediale (musculus gastrocnemius)") AnnotationAssertion(Annotation( "FMA:45956") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "caput mediale musculus gastrocnemii") AnnotationAssertion(Annotation( "FMA:45956") "medial head of gastrocnemius") AnnotationAssertion( "medial head of gastrocnemius muscle") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011907") AnnotationAssertion(rdfs:comment "Mammalian gastrocnemius medialis and flexor hallucis longus arise from reptilian gastrocnemius internus[Kardong]") AnnotationAssertion(rdfs:label "gastrocnemius medialis") SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) DisjointClasses(Annotation( "lexical"^^xsd:string) ) # Class: (gastrocnemius lateralis) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:36249") AnnotationAssertion( "FMA:45959") AnnotationAssertion(Annotation( "FMA:45959") "caput laterale (musculus gastrocnemius)") AnnotationAssertion(Annotation( "FMA:45959") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "caput laterale musculus gastrocnemii") AnnotationAssertion(Annotation( "FMA:45959") "lateral head of gastrocnemius") AnnotationAssertion( "lateral head of gastrocnemius muscle") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011908") AnnotationAssertion(rdfs:comment "Mammalian gastrocnemius lateralis, soleus and plantaris arise from reptilian gastrocnemius externus[Kardong]") AnnotationAssertion(rdfs:label "gastrocnemius lateralis") SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (gastrocnemius internus) AnnotationAssertion( "M. gastrocnemius internus") AnnotationAssertion( "musculus gastrocnemius internus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011909") AnnotationAssertion(rdfs:label "gastrocnemius internus") SubClassOf( ) # Class: (gastrocnemius externus) AnnotationAssertion( "M. gastrocnemius externus") AnnotationAssertion( "musculus gastrocnemius externus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011910") AnnotationAssertion(rdfs:label "gastrocnemius externus") SubClassOf( ) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (cerebellar glomerulus) AnnotationAssertion(Annotation( "ISBN:0838580343") Annotation( "MP:0004099") "An intertwined cluster of nerve fibers surrounded by glia where mossy fibers from the pontine nuclei in the white matter synapse with granule cell axons, Golgi cell axons and unipolar brush interneuron axons.") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37812") AnnotationAssertion( "NIF_Subcellular:nlx_subcell_20090502") AnnotationAssertion(Annotation( ) "cerebellar glomeruli") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011915") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "cerebellar glomerulus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (thalamic glomerulus) AnnotationAssertion(Annotation( "NIF_Subcellular:nlx_subcell_20090504") "Synaptic structure found in thalamic relay nuclei consising of a complex of afferent terminals, relay cell dendrites, interneuron dendrites and other processes. These complexes are surrounded by astrocytic processes.") AnnotationAssertion( "NIF_Subcellular:nlx_subcell_20090504") AnnotationAssertion(Annotation( ) "thalamic glomeruli") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011917") AnnotationAssertion(rdfs:label "thalamic glomerulus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (line of Schwalbe) AnnotationAssertion(Annotation( "MP:0006250") "The thickened peripheral margin of the vitreous membrane of the cornea.") AnnotationAssertion(Annotation( "FMA"^^xsd:string) "A line in FMA, a structure in MP") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37895") AnnotationAssertion( "FMA:58422") AnnotationAssertion(Annotation( "FMA:58422") "Schwalbe line") AnnotationAssertion(Annotation( "FMA:58422") "Schwalbe's line") AnnotationAssertion(Annotation( "MP:0006250") "Schwalbe's ring") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011918") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "line of Schwalbe") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "MP"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (yolk sac blood island) AnnotationAssertion(Annotation( "MP:0011204") "Masses of developing blood cells attached to endothelium in the yolk sac.") AnnotationAssertion( "EHDAA2:0000177") AnnotationAssertion( "EMAPA:16115") AnnotationAssertion(Annotation( "MP:0011204") "visceral yolk sac blood island") AnnotationAssertion(Annotation( "EHDAA2:0000177") "yolk sac blood islands") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011919") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "yolk sac blood island") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (connecting stalk blood islands) AnnotationAssertion(Annotation( "EHDAA2"^^xsd:string) "in EHDAA2 gives rise to connecting stalk blood vessels and extraembryonic umbilical vessels") AnnotationAssertion( "EHDAA2:0003242") AnnotationAssertion(Annotation( ) "blood island of umbilical vesicle") AnnotationAssertion(Annotation( ) "insula sanguinea vesiculae umbilicalis") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011921") AnnotationAssertion(rdfs:label "connecting stalk blood islands") SubClassOf(Annotation( "EHDAA2"^^xsd:string) ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (cochlear basement membrane) AnnotationAssertion(Annotation( "MP:0004598") "The the continuous basement membrane found within the membranous labyrinth of the cochlea, known to extend from the limbus, down to the inner sulcus, across the basilar membrane, up to the external sulcus to the spiral prominence and radiating into the spiral ligament ensheathing the root cell processes.") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37830") AnnotationAssertion( "basement membrane of cochlear labyrinth") AnnotationAssertion( "cochlea basement membrane") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011922") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "cochlear basement membrane") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (postganglionic autonomic fiber) AnnotationAssertion(Annotation( ) Annotation( "MESH:A08.663.542.100") "Nerve fibers which project from cell bodies of autonomic ganglia to synapses on target organs.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:5924") AnnotationAssertion( "MESH:A08.663.542.100") AnnotationAssertion( "NCIT:C12648") AnnotationAssertion(Annotation( "ncithesaurus:Postganglionic_Autonomic_Fiber") "UMLS:C0004384") AnnotationAssertion(Annotation( "FMA:5924") "postganglionic nerve fiber") AnnotationAssertion( "uberon") AnnotationAssertion( "postganglionic autonomic fibre") AnnotationAssertion( "UBERON:0011924") AnnotationAssertion(rdfs:label "postganglionic autonomic fiber") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (preganglionic autonomic fiber) AnnotationAssertion(Annotation( ) Annotation( "MESH:A08.663.542.122") "Nerve fibers which project from the central nervous system to autonomic ganglia. In the sympathetic division most preganglionic fibers originate with neurons in the intermediolateral column of the spinal cord, exit via ventral roots from upper thoracic through lower lumbar segments, and project to the paravertebral ganglia; there they either terminate in synapses or continue through the splanchnic nerves to the prevertebral ganglia. In the parasympathetic division the fibers originate in neurons of the brain stem and sacral spinal cord. In both divisions the principal transmitter is acetylcholine but peptide cotransmitters may also be released.") AnnotationAssertion( ) AnnotationAssertion( "FMA:5923") AnnotationAssertion( "MESH:A08.663.542.122") AnnotationAssertion( "NCIT:C12624") AnnotationAssertion(Annotation( "FMA:5923") "preganglionic nerve fiber") AnnotationAssertion( "uberon") AnnotationAssertion( "preganglionic autonomic fibre") AnnotationAssertion( "UBERON:0011925") AnnotationAssertion(rdfs:label "preganglionic autonomic fiber") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (postganglionic sympathetic fiber) AnnotationAssertion(Annotation( "MP:0008312") "A noradrenergic or adrenergic axonal fiber projecting from a sympathetic ganglion to an effector organ.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "MESH:A08.663.542.075.800") AnnotationAssertion( "NCIT:C12650") AnnotationAssertion(Annotation( "ncithesaurus:Postganglionic_Sympathetic_Fiber") "UMLS:C0206254") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "MESH:A08.663.542.075.800") "postganglionic sympathetic fiber") AnnotationAssertion(Annotation( "MP:0008312") "sympathetic postganglionic fiber") AnnotationAssertion( "UBERON:0011926") AnnotationAssertion(rdfs:label "postganglionic sympathetic fiber") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (preganglionic sympathetic fiber) AnnotationAssertion(Annotation( "MP:0008310") "A cholinergic axonal fiber projecting from the CNS to a sympathetic ganglion.") AnnotationAssertion( ) AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "MP:0008310") "sympathetic preganglionic fiber") AnnotationAssertion( "UBERON:0011927") AnnotationAssertion(rdfs:label "preganglionic sympathetic fiber") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (postganglionic parasympathetic fiber) AnnotationAssertion(Annotation( "MP:0008313") "A cholinergic axonal fiber projecting from a parasympathetic ganglion to an effector organ.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "MESH:A08.663.542.100.700") AnnotationAssertion( "NCIT:C12649") AnnotationAssertion(Annotation( "ncithesaurus:Postganglionic_Parasympathetic_Fiber") "UMLS:C0206252") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "MP:0008313") "parasympathetic postganglionic fiber") AnnotationAssertion( "UBERON:0011929") AnnotationAssertion(rdfs:label "postganglionic parasympathetic fiber") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (preganglionic parasympathetic fiber) AnnotationAssertion(Annotation( "MP:0008311") "A cholinergic axonal fibers projecting from the CNS to a parasympathetic ganglion.") AnnotationAssertion( ) AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "MP:0008311") "parasympathetic preganglionic fiber") AnnotationAssertion( "UBERON:0011930") AnnotationAssertion(rdfs:label "preganglionic parasympathetic fiber") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (nasal hair) AnnotationAssertion(Annotation( ) "Hair in the nose.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:53670") AnnotationAssertion(Annotation( "FMA:53670") "hair of nose") AnnotationAssertion(Annotation( "FMA:53670") "hair of vestibular part of nose") AnnotationAssertion(Annotation( "FMA:53670") "nose hair") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011931") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "nasal hair") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pilosebaceous unit) AnnotationAssertion(Annotation( ) Annotation( "ISBN:0123813611"^^xsd:string) Annotation( "PMCID:PMC3130146") "An epidermal invagination that has as parts a hair follicle, a sebaceous gland, and arrector pili muscle.") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:36582") AnnotationAssertion( "FMA:70661") AnnotationAssertion(Annotation( ) "fabrica pilosebacea") AnnotationAssertion(Annotation( "FMA:70661") "pilo-sebaceous apparatus") AnnotationAssertion( "pilo-sebaceous unit") AnnotationAssertion( "pilosebaceous apparatus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:70661") "pilosebaceous gland") AnnotationAssertion( "UBERON:0011932") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "pilosebaceous unit") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "ISBN:0123813611"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lateral angle of scapula) AnnotationAssertion(Annotation( ) "An angle of the scapula that is broad and bears the glenoid cavity or fossa[WP,unvetted].") AnnotationAssertion( ) AnnotationAssertion( "FMA:23249") AnnotationAssertion(Annotation( "FMA:23249") "angulus lateralis (scapula)") AnnotationAssertion(Annotation( ) Annotation( ) "angulus lateralis scapulae") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "glenoid angle of scapula") AnnotationAssertion(Annotation( ) "head of scapula") AnnotationAssertion(Annotation( "FMA:23249") "scapular head") AnnotationAssertion( "UBERON:0011941") AnnotationAssertion(rdfs:label "lateral angle of scapula") SubClassOf(Annotation( "EMAPA-modified") ) # Class: (obsolete adult human) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011942") AnnotationAssertion(rdfs:label "obsolete adult human") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (subintestinal vein) AnnotationAssertion( "TAO:0005035") AnnotationAssertion( "XAO:0004172") AnnotationAssertion( "ZFA:0005035") AnnotationAssertion(Annotation( "ZFA:0005035") "SIV") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "ZFA:0005035") Annotation( ) "vitelline vein") AnnotationAssertion( "UBERON:0011944") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "subintestinal vein") SubClassOf(Annotation( "XAO"^^xsd:string) ) # Class: (luminal layer of epithelium) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011945") AnnotationAssertion(rdfs:label "luminal layer of epithelium") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (subluminal layer of epithelium) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011946") AnnotationAssertion(rdfs:label "subluminal layer of epithelium") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (ureter luminal urothelium) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A luminal layer of epithelium that is part of a ureter.") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37779") AnnotationAssertion( "MA:0002656") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011947") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "ureter luminal urothelium") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (ureter subluminal urothelium) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37780") AnnotationAssertion( "MA:0002657") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011948") AnnotationAssertion(rdfs:label "ureter subluminal urothelium") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (endometrium luminal epithelium) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A luminal layer of epithelium that is part of a endometrium epithelium.") AnnotationAssertion( "EMAPA:35309") AnnotationAssertion( "MA:0002733") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011949") AnnotationAssertion(rdfs:label "endometrium luminal epithelium") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (mammary gland luminal epithelium) AnnotationAssertion(Annotation( "MGI:anna"^^xsd:string) "The inner cell layer of the mammary epithelium bilayer that lines the luminal surface of mammary gland ducts and alveoli; luminal cells have only limited contact with the underlying basement membrane and surrounding connective tissue; they are secretory epithelial cells characterized by the expression of the receptors for systemic hormones, i.e. estrogens, progesterone and prolactin.") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37902") AnnotationAssertion( "FMA:74458") AnnotationAssertion(Annotation( "FMA:74458") "lumina layer of epithelium of lactiferous gland") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011950") AnnotationAssertion(rdfs:label "mammary gland luminal epithelium") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (prostate luminal epithelium) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A luminal layer of epithelium that is part of a prostate gland.") AnnotationAssertion( "FMA:74262") AnnotationAssertion(Annotation( "FMA:74262") "subdivision of luminal layer of epithelium of prostatic gland") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011951") AnnotationAssertion(rdfs:label "prostate luminal epithelium") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (non-glandular epithelium) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011952") AnnotationAssertion(rdfs:label "non-glandular epithelium") SubClassOf( ) # Class: (stomach glandular region) AnnotationAssertion(Annotation( ) "A region of the stomach that is lined with glandular epithelium.") AnnotationAssertion( "as currently defined, this would include the cardiac antrum; however, the intent may be to exclude the cardiac glands and in mice for this to be part of the region distal to the margo plicatus") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:17623") AnnotationAssertion( "MA:0001613") AnnotationAssertion( "NCIT:C77661") AnnotationAssertion(Annotation( "ncithesaurus:Glandular_Stomach") "UMLS:C0227197") AnnotationAssertion( "uberon") AnnotationAssertion( "glandular stomach") AnnotationAssertion( "UBERON:0011953") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "stomach glandular region") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (stomach non-glandular region) AnnotationAssertion(Annotation( ) "A region of the stomach is lined with non-glandular epithelium. Examples of a stomach non-glandular region are found in rodents.") AnnotationAssertion( "EMAPA:17627") AnnotationAssertion( "MA:0001625") AnnotationAssertion( "NCIT:C77662") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "EMAPA:17627") "stomach cutaneous region") AnnotationAssertion(Annotation( "EMAPA:17627") "stomach ependymal region") AnnotationAssertion( "UBERON:0011954") AnnotationAssertion(rdfs:label "stomach non-glandular region") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (left hepatic vein) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A hepatic vein that is part of a left lobe of liver.") AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37164") AnnotationAssertion( "FMA:14339") AnnotationAssertion( "MA:0003032") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011955") AnnotationAssertion(rdfs:label "left hepatic vein") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (right hepatic vein) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A hepatic vein that is part of a right lobe of liver.") AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37377") AnnotationAssertion( "FMA:14338") AnnotationAssertion( "MA:0003034") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011956") AnnotationAssertion(rdfs:label "right hepatic vein") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (middle hepatic vein) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37175") AnnotationAssertion( "FMA:14340") AnnotationAssertion( "MA:0003033") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011957") AnnotationAssertion(rdfs:label "middle hepatic vein") SubClassOf( ) # Class: (acetabular labrum) AnnotationAssertion(Annotation( ) "A ring of cartilage that surrounds the acetabulum[WP,unvetted].") AnnotationAssertion(Annotation( "AAO class treated as equivalent to labrum based on this definition") Annotation( "AAO:0000864") "Cartilaginous ring that forms the entire acetabular margin[AAO:0000864].") AnnotationAssertion( "Its function is to deepen the acetabulum, making it more difficult for the head of the femur to slip out of place (sublux)") AnnotationAssertion( "some sources treat this as fibrocartilage") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0000864") AnnotationAssertion( "FMA:43521") AnnotationAssertion(Annotation( ) Annotation( ) "labrum acetabuli") AnnotationAssertion(Annotation( "FMA:43521") "labrum of acetabulum") AnnotationAssertion( "uberon") AnnotationAssertion( "acetabular lip") AnnotationAssertion(Annotation( "AAO:0000864") Annotation( ) "acetabular rim") AnnotationAssertion(Annotation( ) "cotyloid ligament") AnnotationAssertion(Annotation( ) "glenoidal labrum of hip joint") AnnotationAssertion( "UBERON:0011958") AnnotationAssertion(rdfs:label "acetabular labrum") SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (glenoid labrum of scapula) AnnotationAssertion(Annotation( ) Annotation( ) "A ring of fibrocartilage attached to the margin of the glenoid cavity of the scapula.") AnnotationAssertion( "consider classifying as 'annulus fibrosus'") AnnotationAssertion( "glenoid labrum") AnnotationAssertion( "glenoidal labrum") AnnotationAssertion( ) AnnotationAssertion( "FMA:23290") AnnotationAssertion( "glenoidal labrum of glenohumeral joint") AnnotationAssertion( "glenoidal labrum of scapula") AnnotationAssertion(Annotation( ) "labrum glenoidale") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "labrum glenoidale scapulae") AnnotationAssertion( "UBERON:0011959") AnnotationAssertion(rdfs:label "glenoid labrum of scapula") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (articular capsule of glenohumeral joint) AnnotationAssertion(Annotation( ) "An articular capsule that is part of the glenohumeral joint.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:34944") AnnotationAssertion(Annotation( ) "articular capsule of humerus") AnnotationAssertion( "articular capsule of shoulder joint") AnnotationAssertion(Annotation( "FMA:34944") "capsule of shoulder joint") AnnotationAssertion(Annotation( "FMA:34944") "fibrous capsule of glenohumeral joint") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:34944") "glenohumeral joint capsule") AnnotationAssertion( "UBERON:0011960") AnnotationAssertion(rdfs:label "articular capsule of glenohumeral joint") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (articular capsule of hip joint) AnnotationAssertion(Annotation( ) "An articular capsule that is part of the hip joint.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:42821") AnnotationAssertion(Annotation( ) Annotation( ) "capsula articularis coxae") AnnotationAssertion(Annotation( ) "capsule of hip joint") AnnotationAssertion(Annotation( "FMA:42821") "fibrous capsule of hip joint") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011961") AnnotationAssertion(rdfs:label "articular capsule of hip joint") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (transverse tarsal joint) AnnotationAssertion(Annotation( ) "The transverse tarsal joint is formed by the articulation of the calcaneus with the cuboid, and the articulation of the talus with the navicular. The movement which takes place in this joint is more extensive than that in the other tarsal joints, and consists of a sort of rotation by means of which the foot may be slightly flexed or extended, the sole being at the same time carried medially (inverted) or laterally.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:35201") AnnotationAssertion( "NCIT:C102354") AnnotationAssertion(Annotation( ) "articulatio tarsi transversa") AnnotationAssertion(Annotation( "FMA:35201") "chopart's joint") AnnotationAssertion(Annotation( ) "midtarsal joint") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011962") AnnotationAssertion(rdfs:label "transverse tarsal joint") SubClassOf( ) # Class: (talocalcaneonavicular joint) AnnotationAssertion(Annotation( ) "The talocalcaneonavicular articulation is an arthrodial joint: the rounded head of the talus being received into the concavity formed by the posterior surface of the navicular, the anterior articular surface of the calcaneus, and the upper surface of the plantar calcaneonavicular ligament. There are two ligaments in this joint: the articular capsule and the dorsal talonavicular.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:35204") AnnotationAssertion(Annotation( ) Annotation( ) "articulatio talocalcaneonavicularis") AnnotationAssertion(Annotation( ) "talocalcaneonavicular articulation") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011963") AnnotationAssertion(rdfs:label "talocalcaneonavicular joint") SubClassOf( ) SubClassOf(Annotation( "FMA-modified") ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (calcaneocuboid joint) AnnotationAssertion(Annotation( ) "Calcaneocuboid Articulation (articulation of the calcaneus with the cuboid). The ligaments connecting the calcaneus with the cuboid are five in number, viz. , the articular capsule, the dorsal calcaneocuboid, part of the bifurcated, the long plantar, and the plantar calcaneocuboid.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:35207") AnnotationAssertion(Annotation( "FMA:35207") Annotation( ) "articulatio calcaneocubiodea") AnnotationAssertion(Annotation( ) "calcaneocuboid articulation") AnnotationAssertion( "calcaneocuboidal joint") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011964") AnnotationAssertion(rdfs:label "calcaneocuboid joint") SubClassOf( ) SubClassOf(Annotation( "FMA-modified") ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (saddle joint) AnnotationAssertion(Annotation( ) "In a saddle joint (sellar joint, articulation by reciprocal reception) the opposing surfaces are reciprocally concave-convex.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:75298") AnnotationAssertion(Annotation( ) "sellar joint") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "articulation by reciprocal reception") AnnotationAssertion( "UBERON:0011965") AnnotationAssertion(rdfs:label "saddle joint") SubClassOf( ) # Class: (manubriosternal joint) AnnotationAssertion(Annotation( ) Annotation( ) "The early union, by hyaline cartilage, of the manubrium and the body of the sternum, which later becomes a symphysial type of joint.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:7502") AnnotationAssertion(Annotation( "FMA:7502") "manubriosternal symphysis") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "angle of louis") AnnotationAssertion(Annotation( ) "angulus ludovici") AnnotationAssertion(Annotation( ) "angulus sternalis") AnnotationAssertion(Annotation( ) "angulus sterni") AnnotationAssertion(Annotation( ) "manubriosternal joint") AnnotationAssertion(Annotation( ) "manubriosternal junction") AnnotationAssertion(Annotation( ) "manubro-sterno junction") AnnotationAssertion( "UBERON:0011966") AnnotationAssertion(rdfs:label "manubriosternal joint") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (costotransverse joint) AnnotationAssertion(Annotation( ) "The facet of the tubercle of the rib forms an articulation with the adjacent transverse process of a thoracic vertebra. This is a plane type synovial joint called the costotransverse joint. This articulation is present in all but the eleventh and twelfth ribs. Ribs 1 to 10 have two joints in close proximity posteriorly; the costovertebral joints and the costotranseverse joints. This arrangement restrains the motion of the ribs allowing them to work in a parallel fashion during breathing. If a typical rib had only one joint posteriorly the resultant swivel action would allow a rib to be non-parallel with respect to the neighboring ribs making for a very inefficient respiratory mechanism. The ventral rami innervate the costotransverse joints. Therefore, therapeutic medial branch blocks are ineffectual. The ligaments of the joint are: Articular capsule Posterior costotransverse Anterior costotransverse Ligament of the neck of the rib Ligament of the tubercle of the rib.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:7952") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "costotransverse articulation") AnnotationAssertion( "UBERON:0011967") AnnotationAssertion(rdfs:label "costotransverse joint") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (radio-carpal joint) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A skeletal joint that connects a radius bone and connects a carpal skeleton.") AnnotationAssertion(Annotation( "FMA:35291") Annotation( ) "wrist joint") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:19205") AnnotationAssertion( "FMA:35291") AnnotationAssertion( "MA:0000461") AnnotationAssertion(Annotation( ) Annotation( ) "articulatio radiocarpea") AnnotationAssertion(Annotation( ) "radiocarpal articulation") AnnotationAssertion( "radiocarpal joint") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011968") AnnotationAssertion(rdfs:label "radio-carpal joint") SubClassOf(Annotation( "MA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (mesotarsal joint) AnnotationAssertion(Annotation( ) "An ankle joint that passes between the proximal and distal tarsals.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011969") AnnotationAssertion(rdfs:comment "Calcaneus and astragalus are interlocked, line of flexion is distal to them[Kardong]") AnnotationAssertion(rdfs:label "mesotarsal joint") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (talofibular ligament) AnnotationAssertion(Annotation( ) "A skeletal ligament that connects the fibula to the talus. Examples: anterior and posterior talofibular ligament.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:44080") AnnotationAssertion(Annotation( ) Annotation( ) "ligamentum talofibulare") AnnotationAssertion( "talo-fibular ligament") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011970") AnnotationAssertion(rdfs:label "talofibular ligament") AnnotationAssertion( "Ankle:en.svg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (calcaneofibular ligament) AnnotationAssertion(Annotation( ) "A skeletal ligament that connects the fibula to the calcaneus.") AnnotationAssertion(Annotation( "WP,modified") "In humans, it is a narrow, rounded cord, running from the apex of the fibular malleolus downward and slightly backward to a tubercle on the lateral surface of the calcaneus. It is covered by the tendons of the Peronæi longus and brevis.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:44089") AnnotationAssertion(Annotation( ) Annotation( ) "ligamentum calcaneofibulare") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011971") AnnotationAssertion(rdfs:label "calcaneofibular ligament") AnnotationAssertion( "Ankle:en.svg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (medial ligament of ankle joint) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A skeletal ligament that connects a tibia and connects a tarsal skeleton.") AnnotationAssertion( ) AnnotationAssertion( "FMA:44055") AnnotationAssertion(Annotation( "FMA:44055") "deltoid collateral ligament of ankle joint") AnnotationAssertion(Annotation( "FMA:44055") "deltoid ligament of ankle joint") AnnotationAssertion(Annotation( "FMA:44055") "ligamentum collaterale mediale (articulatio talocruralis)") AnnotationAssertion(Annotation( "FMA:44055") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "ligamentum collaterale mediale articulationis talocruralis") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) "ligamentum deltoideum") AnnotationAssertion(Annotation( "FMA:44055") "ligamentum deltoideum (articulatio talocruralis)") AnnotationAssertion(Annotation( "FMA:44055") "medial collateral ligament of ankle joint") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011972") AnnotationAssertion(rdfs:label "medial ligament of ankle joint") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (epiphysis of phalanx of pes) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An epiphysis that is part of a phalanx of a pes [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( "epiphysis of phalanx of toe") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011973") AnnotationAssertion(rdfs:label "epiphysis of phalanx of pes") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (epiphysis of proximal phalanx of pes) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An epiphysis that is part of a proximal phalanx of pes.") AnnotationAssertion( ) AnnotationAssertion( "epiphysis of proximal phalanx of toe") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011974") AnnotationAssertion(rdfs:label "epiphysis of proximal phalanx of pes") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (epiphysis of middle phalanx of pes) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An epiphysis that is part of a middle phalanx of pes.") AnnotationAssertion( ) AnnotationAssertion( "epiphysis of middle phalanx of toe") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011975") AnnotationAssertion(rdfs:label "epiphysis of middle phalanx of pes") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (epiphysis of distal phalanx of pes) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An epiphysis that is part of a distal phalanx of pes.") AnnotationAssertion( ) AnnotationAssertion( "epiphysis of distal phalanx of toe") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011976") AnnotationAssertion(rdfs:label "epiphysis of distal phalanx of pes") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (epiphysis of proximal phalanx of manus) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An epiphysis that is part of a proximal phalanx of manus.") AnnotationAssertion( ) AnnotationAssertion( "epiphysis of proximal phalanx of finger") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011977") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "epiphysis of proximal phalanx of manus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (epiphysis of middle phalanx of manus) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An epiphysis that is part of a middle phalanx of manus.") AnnotationAssertion( ) AnnotationAssertion( "epiphysis of middle phalanx of finger") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011978") AnnotationAssertion(rdfs:label "epiphysis of middle phalanx of manus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (epiphysis of distal phalanx of manus) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An epiphysis that is part of a distal phalanx of manus.") AnnotationAssertion( ) AnnotationAssertion( "FMA:321561") AnnotationAssertion( "epiphysis of distal phalanx of finger") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011979") AnnotationAssertion(rdfs:label "epiphysis of distal phalanx of manus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (crurotarsal joint) AnnotationAssertion(Annotation( ) "A joint that connects the bones of the crus to the proximal tarsal bones.") AnnotationAssertion(Annotation( ) "an ankle joint that passes between the astragalus and calcaneum[Palaeos].") AnnotationAssertion( ) AnnotationAssertion( "uberon") AnnotationAssertion( "crurotarsal") AnnotationAssertion( "UBERON:0011980") AnnotationAssertion(rdfs:comment "line of flexion between calcaneus and astragalus") AnnotationAssertion(rdfs:label "crurotarsal joint") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (manual digit 6) AnnotationAssertion( "6"^^xsd:nonNegativeInteger) AnnotationAssertion( "6th finger") AnnotationAssertion( "fore digit VI") AnnotationAssertion(Annotation( "OBOL:accepted"^^xsd:string) "fore limb digit 6") AnnotationAssertion(Annotation( ) Annotation( ) "manual digit VI") AnnotationAssertion( "sixth finger") AnnotationAssertion(Annotation( "NCBITaxon:9606"^^xsd:string) Annotation( "OBOL:accepted"^^xsd:string) Annotation( ) "hand digit 6") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011981") AnnotationAssertion(rdfs:comment "Found in Acanthostega") AnnotationAssertion(rdfs:label "manual digit 6") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (manual digit 7) AnnotationAssertion( "7"^^xsd:nonNegativeInteger) AnnotationAssertion( "fore digit VII") AnnotationAssertion(Annotation( "OBOL:accepted"^^xsd:string) "fore limb digit 7") AnnotationAssertion(Annotation( ) Annotation( ) "manual digit VII") AnnotationAssertion( "seventh finger") AnnotationAssertion(Annotation( "NCBITaxon:9606"^^xsd:string) Annotation( "OBOL:accepted"^^xsd:string) Annotation( ) "hand digit 7") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011982") AnnotationAssertion(rdfs:comment "Found in Acanthostega") AnnotationAssertion(rdfs:label "manual digit 7") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (manual digit 8) AnnotationAssertion( "8"^^xsd:nonNegativeInteger) AnnotationAssertion( "eighth finger") AnnotationAssertion( "fore digit VIII") AnnotationAssertion(Annotation( "OBOL:accepted"^^xsd:string) "fore limb digit 8") AnnotationAssertion(Annotation( ) Annotation( ) "manual digit VIII") AnnotationAssertion(Annotation( "NCBITaxon:9606"^^xsd:string) Annotation( "OBOL:accepted"^^xsd:string) Annotation( ) "hand digit 8") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011983") AnnotationAssertion(rdfs:comment "Found in Acanthostega") AnnotationAssertion(rdfs:label "manual digit 8") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pedal digit 6) AnnotationAssertion( "6"^^xsd:nonNegativeInteger) AnnotationAssertion(Annotation( ) "digitus sextus pedis") AnnotationAssertion( "hind digit 6") AnnotationAssertion( "hind digit VI") AnnotationAssertion(Annotation( "OBOL:accepted"^^xsd:string) "hind limb digit 6") AnnotationAssertion(Annotation( ) Annotation( ) "pedal digit VI") AnnotationAssertion( "pes digit VI") AnnotationAssertion( "sixth toe") AnnotationAssertion( "toe 6") AnnotationAssertion(Annotation( "NCBITaxon:9606"^^xsd:string) Annotation( "OBOL:accepted"^^xsd:string) Annotation( ) "foot digit 6") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0011984") AnnotationAssertion(rdfs:label "pedal digit 6") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pharyngeal adductor) AnnotationAssertion( "TAO:0000463") AnnotationAssertion( "ZFA:0000463") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "ZFA:0000463") Annotation( ) "adductors") AnnotationAssertion( "UBERON:0011996") AnnotationAssertion(rdfs:label "pharyngeal adductor") SubClassOf(Annotation( "ZFA"^^xsd:string) ) # Class: (coelom) AnnotationAssertion(Annotation( ) Annotation( ) Annotation( "UBERON:cjm"^^xsd:string) "The aggregate of the coelemic cavity lumen plus the membranes that line the lumen.") AnnotationAssertion( "EHDAA2 distingsuishes between the lumen, the lining, and the 'coelomic cavity', which despire it's name, is not a space - it is the aggregate of space plus lining.") AnnotationAssertion(Annotation( ) ) AnnotationAssertion( "coelomic") AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0004731") AnnotationAssertion(Annotation( "NCBITaxon:33511") "enterocoelom") AnnotationAssertion( "haemocoelom") AnnotationAssertion( "schizocoelom") AnnotationAssertion( "uberon") AnnotationAssertion( "coelem") AnnotationAssertion(Annotation( "EHDAA2:0004731") "coelomic cavity") AnnotationAssertion( "UBERON:0011997") AnnotationAssertion(rdfs:label "coelom") SubClassOf(Annotation( "EHDAA2"^^xsd:string) ) # Class: (myocoele) AnnotationAssertion(Annotation( ) "The cavity within a myotome.") AnnotationAssertion(Annotation( "2012-09-17"^^xsd:string) Annotation( "VHOG:0001283") Annotation( "VHOG"^^xsd:string) Annotation( ) Annotation( "ISBN:978-0072528305 Kardong KV, Vertebrates: Comparative Anatomy, Function, Evolution (2006) p.166 and Figure 5.6") "The central cavity within the mesoderm is the paired primary or embryonic coelom. Parts of the embryonic coelom often become enclosed in the mesoderm, forming a myocoel within the epimere, a nephrocoel within the mesomere, and simple coelom (body cavity) within the lateral plate mesoderm.[well established][VHOG]") AnnotationAssertion( "EMAPA:31134") AnnotationAssertion( "VHOG:0001283") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0012054") AnnotationAssertion(rdfs:label "myocoele") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (left lung lower lobe bronchiole) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A bronchiole that is part of a lower lobe of left lung.") AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0000947") AnnotationAssertion( "bronchiole of left lower lobe") AnnotationAssertion( "bronchiole of left lower lobe of lung") AnnotationAssertion(Annotation( "EHDAA2:0000947") "left lung caudal lobe bronchiole") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0012055") AnnotationAssertion(rdfs:comment "Mouse has single left lobe") AnnotationAssertion(rdfs:label "left lung lower lobe bronchiole") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (left lung upper lobe bronchiole) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A bronchiole that is part of a upper lobe of left lung.") AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0000955") AnnotationAssertion( "bronchiole of left cranial lobe") AnnotationAssertion( "bronchiole of left upper lobe") AnnotationAssertion( "bronchiole of left upper lobe of lung") AnnotationAssertion(Annotation( "EHDAA2:0000955") "left lung cranial lobe bronchiole") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0012056") AnnotationAssertion(rdfs:comment "Mouse has single left lobe") AnnotationAssertion(rdfs:label "left lung upper lobe bronchiole") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (right lung lower lobe bronchiole) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A bronchiole that is part of a lower lobe of right lung.") AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0004094") AnnotationAssertion( "EMAPA:19004") AnnotationAssertion( "bronchiole of right cranial lobe") AnnotationAssertion( "bronchiole of right lower lobe") AnnotationAssertion( "bronchiole of right lower lobe of lung") AnnotationAssertion(Annotation( "EHDAA2:0004094") "right lung caudal lobe bronchiole") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0012059") AnnotationAssertion(rdfs:label "right lung lower lobe bronchiole") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (lobar bronchus of right lung middle lobe) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A lobar bronchus that is part of a middle lobe of right lung.") AnnotationAssertion( "EMAPA:17998") AnnotationAssertion( "FMA:7401") AnnotationAssertion(Annotation( "FMA:7401") "bronchus of right middle lobe") AnnotationAssertion(Annotation( "FMA:7401") "middle lobar bronchus") AnnotationAssertion(Annotation( "FMA:7401") "middle lobe bronchus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0012063") AnnotationAssertion(rdfs:label "lobar bronchus of right lung middle lobe") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lobar bronchus of left lung upper lobe) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A lobar bronchus that is part of a upper lobe of left lung.") AnnotationAssertion( "FMA:7423") AnnotationAssertion(Annotation( "FMA:7423") "bronchus of left upper lobe") AnnotationAssertion(Annotation( "FMA:7423") "left superior lobar bronchus") AnnotationAssertion(Annotation( "FMA:7423") "left upper lobar bronchus") AnnotationAssertion(Annotation( "FMA:7423") "left upper lobe bronchus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0012065") AnnotationAssertion(rdfs:label "lobar bronchus of left lung upper lobe") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lobar bronchus of left lung lower lobe) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A lobar bronchus that is part of a lower lobe of left lung.") AnnotationAssertion( ) AnnotationAssertion( "FMA:7432") AnnotationAssertion(Annotation( "FMA:7432") "bronchus of left lower lobe") AnnotationAssertion(Annotation( "FMA:7432") "left inferior lobar bronchus") AnnotationAssertion(Annotation( "FMA:7432") "left lower lobar bronchus") AnnotationAssertion(Annotation( "FMA:7432") "left lower lobe bronchus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0012066") AnnotationAssertion(rdfs:label "lobar bronchus of left lung lower lobe") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (primary bronchiole) AnnotationAssertion(Annotation( ) Annotation( "ISBN:0123813611"^^xsd:string) "A bronchiole that arises from a segmental bronchus and does not contain cartilage.") AnnotationAssertion( ) AnnotationAssertion( "FMA:62510") AnnotationAssertion(Annotation( "FMA:62510") "proximal bronchiole") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0012067") AnnotationAssertion(rdfs:label "primary bronchiole") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (right lung middle lobe bronchiole) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A bronchiole that is part of a middle lobe of right lung.") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:19008") AnnotationAssertion( "bronchiole of middle right lobe") AnnotationAssertion( "bronchiole of right middle lobe") AnnotationAssertion( "bronchiole of right middle lobe of lung") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0012068") AnnotationAssertion(rdfs:label "right lung middle lobe bronchiole") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (epithelium-associated lymphoid tissue) AnnotationAssertion( "FMA:62811") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0012069") AnnotationAssertion(rdfs:label "epithelium-associated lymphoid tissue") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (palatal tooth) AnnotationAssertion(Annotation( ) "A tooth that is on the roof of the mouth.") AnnotationAssertion(Annotation( ) "palatal teeth") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0012070") AnnotationAssertion(rdfs:label "palatal tooth") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (palate bone) AnnotationAssertion(Annotation( ) "Any bone that is part of a palate.") AnnotationAssertion( "this is distinct (but not disjoint) from palatine bone") AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37930") AnnotationAssertion( "NCIT:C33248") AnnotationAssertion(Annotation( "ncithesaurus:Palate_Bone") "UMLS:C1518857") AnnotationAssertion( "palatal bone") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0012071") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "palate bone") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (palatal part of dermatocranium) AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "ISBN:0073040584"^^xsd:string) "dermatocranium, palatal series") AnnotationAssertion(Annotation( "ISBN:0073040584"^^xsd:string) "palatal series") AnnotationAssertion( "UBERON:0012072") AnnotationAssertion(rdfs:label "palatal part of dermatocranium") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (tooth of palatine bone) AnnotationAssertion(Annotation( ) "A tooth that is attached to a palatine bone.") AnnotationAssertion(Annotation( ) "Teeth present in some fishes on the palatine bones, bones that lie inside the upper jaw bones (sometimes maxillaries, sometimes premaxillaries) usually behind the vomerine tooth patch.") AnnotationAssertion(Annotation( ) "palatine teeth") AnnotationAssertion( "palatine tooth") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0012073") AnnotationAssertion(rdfs:label "tooth of palatine bone") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (bony part of hard palate) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A subdivision of skeletal system that subdivision_of a hard palate.") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37444") AnnotationAssertion( "FMA:59857") AnnotationAssertion(Annotation( "FMA:59857") "bony palate") AnnotationAssertion(Annotation( ) "hard palate skeleton") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) "palatum osseum") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0012074") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "bony part of hard palate") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (replacement bone) AnnotationAssertion(Annotation( "ZFA:0001628") "Bone that forms as a replacement of another structural tissue.") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0001637") Annotation( "TAO"^^xsd:string) Annotation( "TAO:wd"^^xsd:string) "Bone that forms as a replacement of another structural tissue.[TAO]") AnnotationAssertion(Annotation( "ZFA"^^xsd:string) "This class was introduced to be consistent with the ZFA hierarchy. The corresponding TAO term was obsoleted, and never introduced into VSAO. Note that VSAO does have replacement element.") AnnotationAssertion( "AAO:0010768") AnnotationAssertion( "TAO:0001637") AnnotationAssertion( "ZFA:0001628") AnnotationAssertion(Annotation( "ZFA:0001628") Annotation( ) "replacement bones") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0012075") AnnotationAssertion(rdfs:label "replacement bone") SubClassOf(Annotation( "ZFA"^^xsd:string) ) SubClassOf(Annotation( "ZFA"^^xsd:string) ) # Class: (tibiotalar joint) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A skeletal joint that connects a tibia and connects a talus.") AnnotationAssertion(Annotation( "FMA"^^xsd:string) "see also FMA:44063 ! tibiotalar part of medial ligament of ankle joint") AnnotationAssertion(Annotation( ) "ankle joint") AnnotationAssertion( ) AnnotationAssertion(Annotation( ) "talotibial joint") AnnotationAssertion(Annotation( ) "tibioastragalar joint") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0012076") AnnotationAssertion(rdfs:label "tibiotalar joint") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (fovea capitis of femur) AnnotationAssertion(Annotation( ) "The surface of the head of the femur is smooth, coated with cartilage in the fresh state, except over an ovoid depression, the fovea of head of femur, which is situated a little below and behind the center of the head, and gives attachment to the ligamentum teres.") AnnotationAssertion( ) AnnotationAssertion(Annotation( ) "fovea capitis") AnnotationAssertion( ) AnnotationAssertion( "FMA:43700") AnnotationAssertion(Annotation( ) Annotation( ) "fovea capitis femoris") AnnotationAssertion(Annotation( "FMA:43700") "fovea capitis femoris (caput femoris)") AnnotationAssertion( "fovea capitis of femoral head") AnnotationAssertion(Annotation( "FMA:43700") "fovea for ligament of head of femur") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "fovea of head of femur") AnnotationAssertion( "UBERON:0012078") AnnotationAssertion(rdfs:label "fovea capitis of femur") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (metapterygial axis) AnnotationAssertion(Annotation( ) Annotation( ) "Proximodistal trajectory through a metapterygium[Wagner].") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0012079") AnnotationAssertion(rdfs:comment "persisted in sacropterygians, precursor to limb axis") AnnotationAssertion(rdfs:label "metapterygial axis") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (patella cartilage element) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A cartilaginous condensation that has the potential to develop into a patella.") AnnotationAssertion( "Note some sources have this as intramembranous") AnnotationAssertion( "EMAPA:19140") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0012080") AnnotationAssertion(rdfs:label "patella cartilage element") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (patella pre-cartilage condensation) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A pre-cartilage condensation that has the potential to develop into a patella.") AnnotationAssertion( "EMAPA:18510") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0012081") AnnotationAssertion(rdfs:label "patella pre-cartilage condensation") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EMAPA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (bronchial lumen) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An anatomical cavity that is part of a bronchus.") AnnotationAssertion( ) AnnotationAssertion( "FMA:62646") AnnotationAssertion(Annotation( "FMA:62646") "bronchial lumen") AnnotationAssertion(Annotation( "FMA:62646") "lumen of bronchus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0012082") AnnotationAssertion(rdfs:label "bronchial lumen") SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lumen of primary bronchus) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An anatomical cavity that is part of a main bronchus.") AnnotationAssertion( "FMA:13116") AnnotationAssertion(Annotation( "FMA:13116") "lumen of main bronchus") AnnotationAssertion(Annotation( "FMA:13116") "main bronchial lumen") AnnotationAssertion( "principal bronchial lumen") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0012083") AnnotationAssertion(rdfs:label "lumen of primary bronchus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lumen of secondary bronchus) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An anatomical cavity that is part of a lobar bronchus.") AnnotationAssertion( "FMA:62520") AnnotationAssertion(Annotation( "FMA:62520") "lobar bronchial lumen") AnnotationAssertion(Annotation( "FMA:62520") "lumen of lobar bronchus") AnnotationAssertion( "secondary bronchial lumen") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0012084") AnnotationAssertion(rdfs:label "lumen of secondary bronchus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lumen of tertiary bronchus) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An anatomical cavity that is part of a segmental bronchus.") AnnotationAssertion( "FMA:62593") AnnotationAssertion(Annotation( "FMA:62593") "lumen of segmental bronchus") AnnotationAssertion(Annotation( "FMA:62593") "segmental bronchial lumen") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0012085") AnnotationAssertion(rdfs:label "lumen of tertiary bronchus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (perinatal stage) AnnotationAssertion(Annotation( ) "The period spanning the range immediately before and after birth.") AnnotationAssertion( "In birds, the paranatal stage starts when the beak penetrates into the air pocket (air cell) between the inner and outer shell membranes") AnnotationAssertion( "paranatal stage") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0012101") AnnotationAssertion(rdfs:label "perinatal stage") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) # Class: (buccal salivary gland) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A salivary gland that is part of a cheek.") AnnotationAssertion( "FMA:59793") AnnotationAssertion( "NCIT:C32237") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0012102") AnnotationAssertion(rdfs:label "buccal salivary gland") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (suspensory ligament of breast) AnnotationAssertion(Annotation( ) "Cooper's ligaments (also known as the suspensory ligaments of Cooper and the fibrocollagenous septa) are connective tissue in the breast that helps maintain structural integrity. Transmission diffraction tomography can reveal the anatomy. Cooper's Suspensory Ligament should not be confused with the pectineal ligament (sometimes called the inguinal ligament of Cooper) which shares the same eponym.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:58040") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) "retinaculum cutis mammae") AnnotationAssertion(Annotation( "FMA:58040") "suspensory ligament of cooper") AnnotationAssertion(Annotation( "FMA:58040") "suspensory retinaculum of breast") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "Cooper's ligament") AnnotationAssertion(Annotation( ) "ligament of Cooper") AnnotationAssertion(Annotation( ) "suspensory ligament of the breast") AnnotationAssertion(Annotation( ) "suspensory ligaments of breast") AnnotationAssertion(Annotation( ) "suspensory ligaments of the breast") AnnotationAssertion( "UBERON:0012103") AnnotationAssertion(rdfs:comment "Connects skin of mammary gland with deep fascia") AnnotationAssertion(rdfs:label "suspensory ligament of breast") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (sesamoid bone of the peroneus longus muscle) AnnotationAssertion(Annotation( "PMCID:PMC1261702") "os peroneum") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0012104") AnnotationAssertion(rdfs:comment "a coffee bean-shaped constant, large and regular bone. The lateral surface of the bone is convex in all directions and non-articular. The medial surface is covered with hyaline cartilage and articulates by means of a synovial joint with the corresponding facet of the cuboid bone. The histological structure and the mode of ossification of the os peroneum are identical to that of other short bones of the skeleton.") AnnotationAssertion(rdfs:label "sesamoid bone of the peroneus longus muscle") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (postorbital bar) AnnotationAssertion(Annotation( ) Annotation( "MURDOCH:1580") "A strut formed from the union of the zygomatic process of the frontal bone with the frontal process of the zygomatic bone.") AnnotationAssertion( ) AnnotationAssertion( "post-orbital bar") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0012108") AnnotationAssertion(rdfs:label "postorbital bar") SubClassOf( ) SubClassOf(Annotation( "orbital series"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (zygomatic process of frontal bone) AnnotationAssertion(Annotation( ) "The part of the zygomatic process consisting of the frontal bone[WP].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:54389") AnnotationAssertion( "frontal bone - zygomatic process") AnnotationAssertion(Annotation( "FMA:54389") "processus zygomaticus (os frontale)") AnnotationAssertion(Annotation( ) Annotation( ) "processus zygomaticus ossis frontalis") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0012109") AnnotationAssertion(rdfs:label "zygomatic process of frontal bone") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses( ) # Class: (frontal process of zygomatic bone) AnnotationAssertion( ) AnnotationAssertion( "FMA:52907") AnnotationAssertion(Annotation( "FMA:52907") "processus frontalis (os zygomaticum)") AnnotationAssertion(Annotation( "FMA:52907") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "processus frontalis ossis zygomatici") AnnotationAssertion( "zygomatic bone - frontal process") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0012110") AnnotationAssertion(rdfs:label "frontal process of zygomatic bone") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (diastema) AnnotationAssertion(Annotation( ) Annotation( "UBERON:cjm"^^xsd:string) "A space or gap between two consecutive teeth.") AnnotationAssertion( "Many species of mammals have diastemata as a normal feature, most commonly between the incisors and molars") AnnotationAssertion( "UBERON:0013134") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:77271") AnnotationAssertion( "MESH:A14.254.333") AnnotationAssertion( "interdental space") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "diastemata") AnnotationAssertion( "UBERON:0012111") AnnotationAssertion(rdfs:label "diastema") SubClassOf( ) SubClassOf( ObjectIntersectionOf(ObjectMinCardinality(2 ) ObjectMaxCardinality(2 ))) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (ingested food) AnnotationAssertion(Annotation( ) "A substance that is consumed by the organism for food.") AnnotationAssertion(Annotation( "FMA"^^xsd:string) "FMA def restricts this to 'oral cavity, pharynx or esophagus', but child terms includes chyme - which is in the stomach") AnnotationAssertion( "FMA:62964") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0012112") AnnotationAssertion(rdfs:label "ingested food") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (bolus of food) AnnotationAssertion(Annotation( ) "Ingested food has been chewed at the point of swallowing.") AnnotationAssertion( "bolus") AnnotationAssertion( ) AnnotationAssertion( "FMA:78441") AnnotationAssertion(Annotation( "FMA:78441") "bolus of ingested food") AnnotationAssertion(Annotation( "FMA:78441") "food bolus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0012113") AnnotationAssertion(rdfs:label "bolus of food") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (dental comb) AnnotationAssertion(Annotation( ) "A dental structure found in some mammals, comprising a group of front teeth arranged in a manner that facilitates grooming.") AnnotationAssertion( "The toothcomb occurs in lemuriform primates (which includes lemurs and lorisoids), treeshrews, colugos, hyraxes, and some African antelopes. The structures evolved independently in different types of mammals through convergent evolution and vary both in dental composition and structure. In most mammals the comb is formed by a group of teeth with fine spaces between them. The toothcombs in most mammals include incisors only, while in lemuriform primates they include incisors and canine teeth that tilt forward at the front of the lower jaw, followed by a canine-shaped first premolar. The toothcombs of colugos and hyraxes take a different form with the individual incisors being serrated, providing multiple tines per tooth") AnnotationAssertion( ) AnnotationAssertion(Annotation( ) "tooth comb") AnnotationAssertion(Annotation( ) "toothcomb") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0012115") AnnotationAssertion(rdfs:label "dental comb") SubClassOf( ) # Class: (nutrient foramen conduit) AnnotationAssertion(Annotation( ) "Any of the passages admitting nutrient vessels to the medullary cavity of bone.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0012116") AnnotationAssertion(rdfs:label "nutrient foramen conduit") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lumen of nutrient foramen) AnnotationAssertion(Annotation( ) "An anatomical space that is part of a nutrient foramen conduit, leading to the medullary cavity of the bone.") AnnotationAssertion( ) AnnotationAssertion( "FMA:75304") AnnotationAssertion(Annotation( "FMA:75304") "nutrient foramen") AnnotationAssertion(Annotation( ) "nutrient foramina") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0012117") AnnotationAssertion(rdfs:label "lumen of nutrient foramen") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (infraspinatus tendon) AnnotationAssertion(Annotation( "MURDOCH:963") "The infraspinatus muscle inserts at this tendon to the distal greater tubercle of the humerus. This tendon stretches across the shoulder joint to attach to the humerus and in doing so acts as a very strong ligament to hold the joint surface in apposition. This structure restricts the movement of the shoulder joint to flexion and extension (together with the suscapularis tendon and the supraspinatus tendon). A bursa lies under this tendon at the greater tubercle of the humerus. The bursa is lined by a synovial membrance and filled with synovial fluid and protects the infraspinatus tendon and the shoulder joint by allowing the transmissions of tension and sheer forces around an angle.") AnnotationAssertion( "FMA:37076") AnnotationAssertion(Annotation( "FMA:37076") "tendon of infraspinatus muscle") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0012118") AnnotationAssertion(rdfs:label "infraspinatus tendon") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (vinculum of tendon) AnnotationAssertion(Annotation( ) Annotation( ) "A tendinous band that connects the phalanges and the flexor muscles of the autopods.") AnnotationAssertion(Annotation( "FMA"^^xsd:string) "This is not classified as a tendon in FMA") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:42604") AnnotationAssertion(Annotation( "FMA:42604") "tendon vinculum") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0012120") AnnotationAssertion(rdfs:label "vinculum of tendon") SubClassOf( ) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (avian scapholunar bone) AnnotationAssertion( "uberon") AnnotationAssertion( "radiale") AnnotationAssertion( "scapholunar") AnnotationAssertion( "UBERON:0012124") AnnotationAssertion(rdfs:comment "May correspond to radiale[Origin and evolution of birds, Feduccia]") AnnotationAssertion(rdfs:label "avian scapholunar bone") SubClassOf( ) # Class: (dermatological-muscosal system) AnnotationAssertion(Annotation( ) "Anatomical system that consists of the integumental system plus all mucosae and submucosae.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "OBI:MC") "dermatological system") AnnotationAssertion( "UBERON:0012125") AnnotationAssertion(rdfs:label "dermatological-muscosal system") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (fibulare) AnnotationAssertion(Annotation( "AAO:0000913") "One of two elements that constitute the basal row of tarsals. The fibulare constitutes the preaxial element[AAO].") AnnotationAssertion(Annotation( "2012-06-20"^^xsd:string) Annotation( "AAO:0000913") Annotation( "AAO"^^xsd:string) Annotation( "AAO:LAP"^^xsd:string) "One of two element that constitute the basal row of tarsals. The fibulare constitutes the preaxial element. In salamanders this element is aproximatelly rounded, whereas in anurans it is an elongate, cylindrical bone with the proximal and distal heads fused to the heads of the tibiale.[AAO]") AnnotationAssertion(Annotation( "AAO"^^xsd:string) "In salamanders this element is aproximatelly rounded, whereas in anurans it is an elongate, cylindrical bone with the proximal and distal heads fused to the heads of the tibiale") AnnotationAssertion( "AAO:0000913") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "AAO:0000913") "astragalus") AnnotationAssertion( "UBERON:0012126") AnnotationAssertion(rdfs:label "fibulare") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (nose tip) AnnotationAssertion(Annotation( ) Annotation( ) "Outermost point on an external nose or snout.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37915") AnnotationAssertion( "FMA:59518") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) Annotation( ) "apex nasi") AnnotationAssertion(Annotation( "FMA:59518") "apex of nose") AnnotationAssertion(Annotation( "FMA:59518") "nasal tip") AnnotationAssertion(Annotation( "FMA:59518") "tip of nose") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "pirula") AnnotationAssertion( "snout tip") AnnotationAssertion( "tip of snout") AnnotationAssertion( "UBERON:0012128") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "nose tip") SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (radial head of humerus) AnnotationAssertion(Annotation( "AAO:LAP") Annotation( "PHENOSCAPE:curators"^^xsd:string) "Hemispherical ball located at the lower end of the humerus that stands out prominently from the surrounding structures toward the flexor surface of the forelimb.") AnnotationAssertion(Annotation( "AAO:0000838") Annotation( "AAO"^^xsd:string) Annotation( "AAO:LAP"^^xsd:string) "Hemispherical ball located at the lower end of the humerus that stands out prominently from the surrounding structures toward the flexor surface of the forelimb and fits into the socket joint of the olecranon process[AAO].") AnnotationAssertion( "AAO:0000838") AnnotationAssertion( "capitellum of humerus") AnnotationAssertion( "radial condyle of humerus") AnnotationAssertion( "uberon") AnnotationAssertion( "capitellum") AnnotationAssertion(Annotation( "AAO:0000838") "eminentia capitata") AnnotationAssertion(Annotation( "AAO:0000838") "radial condyle") AnnotationAssertion( "UBERON:0012129") AnnotationAssertion(rdfs:label "radial head of humerus") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (olecranon fossa) AnnotationAssertion(Annotation( "MURDOCH:894") "A deep evacuation in the bone, into which the anconeal process of the ulna passes when the elbow joint is extended.") AnnotationAssertion( ) AnnotationAssertion( "FMA:23450") AnnotationAssertion(Annotation( ) Annotation( ) "fossa olecrani") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0012130") AnnotationAssertion(rdfs:label "olecranon fossa") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (centrale) AnnotationAssertion(Annotation( ) Annotation( "PHENOSCAPE:AMAO") "Endochondral bone located between the proximal and distal rows of carpals or tarsals and thus representing the central carpals or tarsals[PHENOSCAPE].") AnnotationAssertion( "This term corresponds both to the navicular bone in the pes and the similar central carpals in the manus") AnnotationAssertion(Annotation( "FMA"^^xsd:string) "the FMA term is under 'general anatomical term'.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:36170") AnnotationAssertion( "FMA:77232") AnnotationAssertion( "central mesopodium bone") AnnotationAssertion(Annotation( "FMA:77232") "os centrale") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "centralia") AnnotationAssertion( "UBERON:0012131") AnnotationAssertion(rdfs:label "centrale") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (intercuneiform joint) AnnotationAssertion(Annotation( ) "The intercuneiform articulations are articulations among the cuneiform bones[WP,unverified].") AnnotationAssertion(Annotation( "WP"^^xsd:string) "The term 'cuneocuboid articulation' is sometimes used to describe the joint between the cuboid and lateral cuneiform, but this term isn't recognized by Terminologia Anatomica") AnnotationAssertion( ) AnnotationAssertion( "FMA:35213") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "cuneocuboid") AnnotationAssertion(Annotation( ) "cuneocuboid articulation") AnnotationAssertion(Annotation( ) "intercuneiform") AnnotationAssertion(Annotation( ) "intercuneiform and cuneocuboid articulations") AnnotationAssertion(Annotation( ) "intercuneiform articulation") AnnotationAssertion(Annotation( ) "intercuneiform joints") AnnotationAssertion( "UBERON:0012132") AnnotationAssertion(rdfs:label "intercuneiform joint") SubClassOf( ) SubClassOf( ObjectIntersectionOf(ObjectMinCardinality(2 ) ObjectMaxCardinality(2 ))) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lateral-intermediate intercuneiform joint) AnnotationAssertion( "TODO - add connections") AnnotationAssertion( "FMA:73223") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0012133") AnnotationAssertion(rdfs:label "lateral-intermediate intercuneiform joint") SubClassOf( ) DisjointClasses(Annotation( "lexical"^^xsd:string) ) # Class: (medial-intermediate intercuneiform joint) AnnotationAssertion( "TODO - add connections") AnnotationAssertion( "FMA:73222") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0012134") AnnotationAssertion(rdfs:label "medial-intermediate intercuneiform joint") SubClassOf( ) # Class: (prepollex skeleton) AnnotationAssertion(Annotation( "AAO:0000852") "prepollex") AnnotationAssertion( "AAO:0000852") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "AAO:0000852") "cartilago pre-pollicis") AnnotationAssertion( "UBERON:0012135") AnnotationAssertion(rdfs:comment "A prepollex does not contain phalanges nor does it articulate with a metacarpal. It articulates with elements of the carpal (wrist) skeleton[AAO:DB]. editor note: TODO add articulation relations") AnnotationAssertion(rdfs:label "prepollex skeleton") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "AAO"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (prehallux) AnnotationAssertion( "prehallical") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0012136") AnnotationAssertion(rdfs:label "prehallux") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pedal digit 7) AnnotationAssertion( "7"^^xsd:nonNegativeInteger) AnnotationAssertion( "hind digit 7") AnnotationAssertion( "hind digit VII") AnnotationAssertion(Annotation( "OBOL:accepted"^^xsd:string) "hind limb digit 7") AnnotationAssertion(Annotation( ) Annotation( ) "pedal digit VII") AnnotationAssertion( "pes digit VII") AnnotationAssertion( "seventh toe") AnnotationAssertion( "toe 7") AnnotationAssertion(Annotation( "NCBITaxon:9606"^^xsd:string) Annotation( "OBOL:accepted"^^xsd:string) Annotation( ) "foot digit 7") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0012137") AnnotationAssertion(rdfs:label "pedal digit 7") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pedal digit 8) AnnotationAssertion( "8"^^xsd:nonNegativeInteger) AnnotationAssertion(Annotation( ) "digitus octus pedis") AnnotationAssertion( "eigth toe") AnnotationAssertion( "hind digit 8") AnnotationAssertion( "hind digit VIII") AnnotationAssertion(Annotation( "OBOL:accepted"^^xsd:string) "hind limb digit 8") AnnotationAssertion(Annotation( ) Annotation( ) "pedal digit VIII") AnnotationAssertion( "pes digit VIII") AnnotationAssertion( "toe 8") AnnotationAssertion(Annotation( "NCBITaxon:9606"^^xsd:string) Annotation( "OBOL:accepted"^^xsd:string) Annotation( ) "foot digit 8") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0012138") AnnotationAssertion(rdfs:label "pedal digit 8") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (segment of autopod) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0012139") AnnotationAssertion(rdfs:label "segment of autopod") SubClassOf(Annotation( "may be revised") ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (digitopodium region) AnnotationAssertion(Annotation( ) Annotation( "PHENOSCAPE:ni") "A segment of the autopod consisting of both acropodial region and metapodial region, but excluding the mesopodial/basopodial region.") AnnotationAssertion( "some sources call this the acropodium. see https://github.com/obophenotype/uberon/wiki/Subdivisions-of-the-autopod") AnnotationAssertion( "uberon") AnnotationAssertion( "acropodium (Wagner)") AnnotationAssertion( "UBERON:0012140") AnnotationAssertion(rdfs:label "digitopodium region") AnnotationAssertion(rdfs:seeAlso "https://github.com/obophenotype/uberon/wiki/Subdivisions-of-the-autopod"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (manual digitopodium region) AnnotationAssertion(Annotation( ) "A digitopodium region that is part of a manus[Obol]. This includes the fingers and metacarpal region, but excludes the carpal region.") AnnotationAssertion( "some sources call this the acropodium. see https://github.com/obophenotype/uberon/wiki/Subdivisions-of-the-autopod") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0012141") AnnotationAssertion(rdfs:label "manual digitopodium region") AnnotationAssertion(rdfs:seeAlso "https://github.com/obophenotype/uberon/wiki/Subdivisions-of-the-autopod"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pedal digitopodium region) AnnotationAssertion(Annotation( ) "A digitopodium region that is part of a pes[Obol]. This includes the toes and metatarsal region, but excludes the tarsals region.") AnnotationAssertion( "some sources call this the acropodium. see https://github.com/obophenotype/uberon/wiki/Subdivisions-of-the-autopod") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0012142") AnnotationAssertion(rdfs:label "pedal digitopodium region") AnnotationAssertion(rdfs:seeAlso "https://github.com/obophenotype/uberon/wiki/Subdivisions-of-the-autopod"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (skeleton of digitopodium) AnnotationAssertion(Annotation( "PHENOSCAPE:ni") "A subdivision of the autopod skeleton consisting of both acropodial skeleon and metapodial skeleton, but excluding the mesopodial/basopodial skeleton.") AnnotationAssertion( "some sources call this the acropodium. see https://github.com/obophenotype/uberon/wiki/Subdivisions-of-the-autopod") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "PHENOSCAPE:ni") "digitopodium") AnnotationAssertion(Annotation( ) "skeleton of digits") AnnotationAssertion( "UBERON:0012150") AnnotationAssertion(rdfs:label "skeleton of digitopodium") AnnotationAssertion(rdfs:seeAlso "https://github.com/obophenotype/uberon/wiki/Subdivisions-of-the-autopod"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (skeleton of manual digitopodium) AnnotationAssertion(Annotation( ) Annotation( "PHENOSCAPE:ni") "A subdivision of the manus skeleton consisting of both manual acropodial skeleton and metacarpal skeleton, but excluding the carpal skeleton.") AnnotationAssertion( "some sources call this the acropodium. see https://github.com/obophenotype/uberon/wiki/Subdivisions-of-the-autopod") AnnotationAssertion( "uberon") AnnotationAssertion( "manual digitopodium") AnnotationAssertion( "UBERON:0012151") AnnotationAssertion(rdfs:label "skeleton of manual digitopodium") AnnotationAssertion(rdfs:seeAlso "https://github.com/obophenotype/uberon/wiki/Subdivisions-of-the-autopod"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (skeleton of pedal digitopodium) AnnotationAssertion(Annotation( ) Annotation( "PHENOSCAPE:ni") "A subdivision of the pes skeleton consisting of both pedal acropodial skeleton and metatarsal skeleton, but excluding the tarsal skeleton.") AnnotationAssertion( "some sources call this the acropodium. see https://github.com/obophenotype/uberon/wiki/Subdivisions-of-the-autopod") AnnotationAssertion( "uberon") AnnotationAssertion( "pedal digitopodium") AnnotationAssertion( "UBERON:0012152") AnnotationAssertion(rdfs:label "skeleton of pedal digitopodium") AnnotationAssertion(rdfs:seeAlso "https://github.com/obophenotype/uberon/wiki/Subdivisions-of-the-autopod"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (buccal fat pad) AnnotationAssertion(Annotation( ) "The Buccal fat pad is one of several encapsulated fat masses in the cheek. It is a deep fat pad located on either side of the face between the buccinator muscle and several more superficial muscles. It should not be confused with the malar fat pad, which is directly below the skin of the cheek. It should also not be confused with jowl fat pads. It is implicated in the formation of hollow cheeks and the nasolabial fold, but not in the formation of jowls.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:59799") AnnotationAssertion(Annotation( "FMA:59799") "Bichat's fat pad") AnnotationAssertion( "cheek fat pad") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0012167") AnnotationAssertion(rdfs:label "buccal fat pad") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (umbilical cord blood) AnnotationAssertion(Annotation( ) "Blood that remains in the placenta and in the attached umbilical cord after childbirth[WP].") AnnotationAssertion( ) AnnotationAssertion( "BTO:0004053") AnnotationAssertion( "CALOHA:TS-1079") AnnotationAssertion( "EFO:0001942") AnnotationAssertion( "MESH:D005312") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0004053") "cord blood") AnnotationAssertion(Annotation( "MESH:A12.207.152.200") "fetal blood") AnnotationAssertion(Annotation( "MESH:A12.207.152.200") "umbilical cord blood") AnnotationAssertion( "UBERON:0012168") AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "Cord blood is collected because it contains stem cells, which can be used to treat hematopoietic and genetic disorders.[WP]") AnnotationAssertion(rdfs:label "umbilical cord blood") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (core of nucleus accumbens) AnnotationAssertion( ) AnnotationAssertion( "BAMS:ACBc") AnnotationAssertion( "BAMS:AcbC") AnnotationAssertion( "DHBA:10340") AnnotationAssertion( "EFO:0002458") AnnotationAssertion( "FMA:77383") AnnotationAssertion( "NLXANAT:20090306") AnnotationAssertion( "PBA:10093") AnnotationAssertion(Annotation( "NLXANAT:20090306") "core of nucleus accumbens") AnnotationAssertion(Annotation( "FMA:77383") "core region of nucleus accumbens") AnnotationAssertion(Annotation( "NLXANAT:20090306") "nucleus accumbens core") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BAMS:AcbC") "accumbens nucleus core") AnnotationAssertion(Annotation( "BAMS:AcbC") "accumbens nucleus, core") AnnotationAssertion(Annotation( "BAMS:ACBc") "nucleusa ccumbens core") AnnotationAssertion( "UBERON:0012170") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "core of nucleus accumbens") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "NIFSTD"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (shell of nucleus accumbens) AnnotationAssertion(Annotation( "NLXANAT:20090307") "Crescent shaped outer zone of the nucleus accumbens, defined by a combination of chemoarchitecture and afferent and efferent connections. The shell is distinguished from the more centrally located core through the notable reduction in staining for the calcium-binding protein calbindin D28K, which is dense in the core and virtually absent in the shell.") AnnotationAssertion( ) AnnotationAssertion( "BAMS:ACBs") AnnotationAssertion( "BAMS:AcbSh") AnnotationAssertion( "DHBA:10341") AnnotationAssertion( "EFO:0002459") AnnotationAssertion( "FMA:77387") AnnotationAssertion( "NLXANAT:20090307") AnnotationAssertion( "PBA:10094") AnnotationAssertion(Annotation( "NLXANAT:20090307") "nucleus accumbens shell") AnnotationAssertion(Annotation( "NLXANAT:20090307") "shell of nucleus accumbens") AnnotationAssertion(Annotation( "FMA:77387") "shell region of nucleus accumbens") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BAMS:AcbSh") "accumbens nucleus shell") AnnotationAssertion(Annotation( "BAMS:AcbSh") "accumbens nucleus, shell") AnnotationAssertion( "UBERON:0012171") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "shell of nucleus accumbens") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "NIFSTD"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (stomach primordium) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A primordium that has the potential to develop into a stomach.") AnnotationAssertion( ) AnnotationAssertion( "EFO:0002580") AnnotationAssertion( "NCIT:C34305") AnnotationAssertion(Annotation( "ncithesaurus:Stomach_Primordium") "UMLS:C1514976") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "EFO:0002580") "stomach endoderm") AnnotationAssertion( "UBERON:0012172") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "stomach primordium") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (middle suprarenal artery) AnnotationAssertion(Annotation( ) "The middle suprarenal arteries (middle capsular arteries; suprarenal arteries) are two small vessels which arise, one from either side of the abdominal aorta, opposite the superior mesenteric artery. They pass laterally and slightly upward, over the crura of the diaphragm, to the suprarenal glands, where they anastomose with suprarenal branches of the inferior phrenic and renal arteries. In the fetus these arteries are of large size.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:14754") AnnotationAssertion(Annotation( "FMA:14754") "middle suprarenal arterial tree") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "arteria suprarenalis media") AnnotationAssertion(Annotation( ) "middle capsular artery") AnnotationAssertion(Annotation( ) "middle suprarenal") AnnotationAssertion(Annotation( ) "middle suprarenal artery") AnnotationAssertion( "UBERON:0012173") AnnotationAssertion(rdfs:label "middle suprarenal artery") SubClassOf( ) SubClassOf( ) # Class: (obsolete geniculate nucleus) AnnotationAssertion( "UBERON:0001926") AnnotationAssertion( "UBERON:0001927") AnnotationAssertion( ) AnnotationAssertion( "EFO:0002463") AnnotationAssertion( "geniculate body") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0012174") AnnotationAssertion(rdfs:comment "inappropriate grouping") AnnotationAssertion(rdfs:label "obsolete geniculate nucleus") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (acoustico-facial VII-VIII ganglion complex) AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0000494") AnnotationAssertion( "EMAPA:16794") AnnotationAssertion( "VHOG:0000715") AnnotationAssertion( "acousticofacial ganglion") AnnotationAssertion( "facio-acoustic ganglion") AnnotationAssertion(Annotation( "EMAPA:16794") "facio-acoustic ganglion complex VII-VIII") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "VHOG:0000715") "facio-acoustic VII-VIII ganglion complex") AnnotationAssertion(Annotation( "EMAPA:16794") "facio-acoustic ganglion complex") AnnotationAssertion( "UBERON:0012175") AnnotationAssertion(rdfs:label "acoustico-facial VII-VIII ganglion complex") SubClassOf(Annotation( "cjm"^^xsd:string) ) SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "cjm"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (skin apocrine gland) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An apocrine gland that is part of a skin of body.") AnnotationAssertion( "MA:0000147") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0012177") AnnotationAssertion(rdfs:label "skin apocrine gland") SubClassOf(Annotation( "MA"^^xsd:string) ) SubClassOf( ) SubClassOf( ) # Class: (bone of pelvis) AnnotationAssertion(Annotation( "MA"^^xsd:string) "in MA, this is the superclass of the 3 innominate elements (pelvic girdle bones) and caudal and sacral vertebrae. This class is included to ensure consistency across anatomical ontologies") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37249") AnnotationAssertion( "MA:0000532") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0012179") AnnotationAssertion(rdfs:label "bone of pelvis") SubClassOf(Annotation( "MA"^^xsd:string) ) SubClassOf( ) # Class: (head or neck skin) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A zone of skin that is part of a craniocervical region.") AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37276") AnnotationAssertion( "MA:0000574") AnnotationAssertion( "NCIT:C12294") AnnotationAssertion(Annotation( "ncithesaurus:Skin_of_the_Scalp_and_Neck") "UMLS:C1522650") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0012180") AnnotationAssertion(rdfs:label "head or neck skin") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (tonsil crypt) AnnotationAssertion(Annotation( ) "Tonsils consist of an extensive system of crypts, which result in a large internal surface. The tonsils contain four lymphoid compartments that influence immune functions, namely the reticular crypt epithelium, the extrafollicular area, the mantle zones of lymphoid follicles, and the follicular germinal centers. In human palatine tonsils, the very first part exposed to the outside environment is tonsillar epithelium.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:55044") AnnotationAssertion( "MA:0000777") AnnotationAssertion( "NCIT:C33791") AnnotationAssertion(Annotation( "ncithesaurus:Tonsillar_Crypt") "UMLS:C0229876") AnnotationAssertion(Annotation( ) Annotation( ) "cryptae tonsillares") AnnotationAssertion(Annotation( "FMA:55044") "tonsillar crypt") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0012181") AnnotationAssertion(rdfs:label "tonsil crypt") SubClassOf( ) # Class: (obsolete tunica vasculosa plexus) AnnotationAssertion( "MA:0001284") AnnotationAssertion( "NCIT:C33823") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0012184") AnnotationAssertion(rdfs:comment "obsolete term deriving from MA to NCITA mappings.") AnnotationAssertion(rdfs:label "obsolete tunica vasculosa plexus") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (ovary growing follicle) AnnotationAssertion(Annotation( "ncithesaurus:Growing_Follicle") "An ovarian follicle undergoing maturation.") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:35628") AnnotationAssertion( "MA:0001708") AnnotationAssertion( "NCIT:C32702") AnnotationAssertion(Annotation( "ncithesaurus:Growing_Follicle") "UMLS:C1512279") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0012186") AnnotationAssertion(rdfs:label "ovary growing follicle") SubClassOf(Annotation( "MA"^^xsd:string) ) # Class: (frontal artery) AnnotationAssertion(Annotation( ) "The supratrochlear artery (or frontal artery), one of the terminal branches of the ophthalmic artery, branches off where the ophthalmic travels posterior to the trochlea.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37590") AnnotationAssertion( "FMA:50025") AnnotationAssertion( "MA:0001960") AnnotationAssertion( "NCIT:C52856") AnnotationAssertion(Annotation( "ncithesaurus:Frontal_Artery") "UMLS:C1708100") AnnotationAssertion(Annotation( "FMA:50025") "supratrochlear artery") AnnotationAssertion(Annotation( "FMA:50025") "supratrochlear branch of ophthalmic artery") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "a supratrochlearis") AnnotationAssertion(Annotation( ) "frontal arteries") AnnotationAssertion(Annotation( ) "frontal artery") AnnotationAssertion( "UBERON:0012187") AnnotationAssertion(rdfs:label "frontal artery") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (phrenic vein) AnnotationAssertion(Annotation( "ncithesaurus:Phrenic_Vein") "The veins that run parallel to the phrenic arteries which include the two superior and two inferior phrenic veins.") AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37180") AnnotationAssertion( "MA:0002194") AnnotationAssertion( "NCIT:C53062") AnnotationAssertion(Annotation( "ncithesaurus:Phrenic_Vein") "UMLS:C1709532") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0012193") AnnotationAssertion(rdfs:label "phrenic vein") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (superior intercostal vein) AnnotationAssertion(Annotation( ) "The superior intercostal veins are two veins that drain the 2nd, 3rd, and 4th intercostal spaces, one vein for each side of the body.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37193") AnnotationAssertion( "MA:0002226") AnnotationAssertion( "NCIT:C33680") AnnotationAssertion(Annotation( "ncithesaurus:Superior_Intercostal_Vein") "UMLS:C1515066") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0012194") AnnotationAssertion(rdfs:label "superior intercostal vein") SubClassOf( ) # Class: (left superior intercostal vein) AnnotationAssertion( ) AnnotationAssertion( "FMA:4797") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0012195") AnnotationAssertion(rdfs:label "left superior intercostal vein") SubClassOf( ) # Class: (right superior intercostal vein) AnnotationAssertion( ) AnnotationAssertion( "FMA:4877") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0012196") AnnotationAssertion(rdfs:label "right superior intercostal vein") SubClassOf( ) # Class: (intercostal vein) AnnotationAssertion(Annotation( ) "The intercostal veins are a group of veins which drain the area between the ribs.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:18762") AnnotationAssertion( "MA:0003166") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0012197") AnnotationAssertion(rdfs:label "intercostal vein") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (intercostal space) AnnotationAssertion(Annotation( ) "A space in the rib cage between two successive ribs.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:12243") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0012198") AnnotationAssertion(rdfs:label "intercostal space") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (posterior intercostal vein) AnnotationAssertion(Annotation( ) "The posterior intercostal veins are veins that drain the intercostal spaces posteriorly. They run with their corresponding posterior intercostal artery on the underside of the rib, the vein superior to the artery. Each vein also gives off a dorsal branch that drains blood from the muscles of the back. There are eleven posterior intercostal veins on each side. Their patterns are variable, but they are commonly arranged as: The 1st posterior intercostal vein, supreme intercostal vein, drains into the brachiocephalic vein or the vertebral vein. The 2nd and 3rd (and often 4th) posterior intercostal veins drain into the superior intercostal vein. The remaining posterior intercostal veins drain into the azygos vein on the right, or the hemiazygos vein on the left.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:4858") AnnotationAssertion(Annotation( "FMA:4858") Annotation( ) "venae intercostalis posterior") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0012199") AnnotationAssertion(rdfs:label "posterior intercostal vein") SubClassOf( ) DisjointClasses(Annotation( "lexical"^^xsd:string) ) # Class: (anterior intercostal vein) AnnotationAssertion(Annotation( ) "The anterior intercostal veins are the veins which drain the anterior intercostal space.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:12831") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0012200") AnnotationAssertion(rdfs:label "anterior intercostal vein") SubClassOf( ) # Class: (intercostal lymph node) AnnotationAssertion(Annotation( ) "The intercostal lymph nodes (intercostal glands ) occupy the posterior parts of the intercostal spaces, in relation to the intercostal vessels. They receive the deep lymphatics from the postero-lateral aspect of the chest; some of these vessels are interrupted by small lateral intercostal glands.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:5932") AnnotationAssertion( "NCIT:C77652") AnnotationAssertion(Annotation( "ncithesaurus:Intercostal_Lymph_Node") "UMLS:C0229761") AnnotationAssertion(Annotation( "FMA:5932") "intercostal node") AnnotationAssertion(Annotation( ) "nodi lymphoidei intercostales") AnnotationAssertion(Annotation( "FMA:5932") "nodus intercostale") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0012236") AnnotationAssertion(rdfs:label "intercostal lymph node") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (superior phrenic vein) AnnotationAssertion(Annotation( ) "The superior phrenic vein, i.e. , the vein accompanying the pericardiacophrenic artery, usually opens into the internal mammary vein.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:78121") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0012237") AnnotationAssertion(rdfs:label "superior phrenic vein") SubClassOf(Annotation( "cjm"^^xsd:string) ) # Class: (ureteric bud trunk) AnnotationAssertion(Annotation( "MP:0011761") "Ureteric bud cells that elongate to form a rigid structure (stalk) consisting of polarized epithelial cells without branching; the stalks differentiate into the collecting system of the mature kidney, while the tip cells interact with the adjacent cells of the metanephric mesenchyme, inducing their conversion into nephrons.") AnnotationAssertion( "EMAPA:27608") AnnotationAssertion( "EMAPA:27697") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "MP:0011761") "ureteric bud stalk") AnnotationAssertion(Annotation( "EMAPA:27608") "ureteric stalk") AnnotationAssertion(Annotation( "EMAPA:27608") "ureteric trunk") AnnotationAssertion( "UBERON:0012238") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "ureteric bud trunk") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (urinary bladder vasculature) AnnotationAssertion(Annotation( "MP:MP"^^xsd:string) "Network of tubes that carries blood through the distensible musculomembranous organ that serves to collect and store urine excreted by the kidneys[MP].") AnnotationAssertion( "EMAPA:28679") AnnotationAssertion( "bladder vasculature") AnnotationAssertion(Annotation( "EMAPA:28679") "blood vessels of bladder") AnnotationAssertion( "set of urinary bladder blood vessels") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "EMAPA:28679") "blood vessel of bladder") AnnotationAssertion( "UBERON:0012239") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "urinary bladder vasculature") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (urethral meatus) AnnotationAssertion(Annotation( ) Annotation( "MP:MP"^^xsd:string) "External opening or orifice of the urethra through which urine and seminal fluid (in males only) leave the body; in males the meatus presents as a vertical slit normally positioned at the tip of glans penis; in females the meatus is located between the clitoris and the vagina in the vulvular vestibule of the female genitalia[MP].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37977") AnnotationAssertion( "FMA:19650") AnnotationAssertion(Annotation( "FMA:19650") "external meatus of urethra") AnnotationAssertion(Annotation( "FMA:19650") "external urethral orifice") AnnotationAssertion(Annotation( "FMA:19650") "external urethral ostium") AnnotationAssertion(Annotation( "FMA:19650") "external urinary meatus") AnnotationAssertion(Annotation( ) "meatus urinarius") AnnotationAssertion(Annotation( ) "orificium urethrae externum") AnnotationAssertion(Annotation( ) "orificium urethræ externum") AnnotationAssertion(Annotation( "FMA:19650") "urethral meatus") AnnotationAssertion( "uberon") AnnotationAssertion( "urinary meatus") AnnotationAssertion( "UBERON:0012240") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "urethral meatus") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (male urethral meatus) AnnotationAssertion(Annotation( ) Annotation( "OBOL:automatic"^^xsd:string) "A urethral meatus that is part of a male urethra[Automatically generated definition].") AnnotationAssertion(Annotation( ) "The external urethral orifice is the external opening or meatus of the urethra, normally placed at the tip of glans penis; it presents as a vertical slit, possibly bounded on either side by two small labia-like projections, In some cases the slit may be more rounded. This occurs naturally in some males and may also be a side effect of excess skin removal during circumcision. Congenital misplacement of the urethral orifice is called hypospadias when it is located in the underside (ventral aspect) of the penis, and epispadias when located in the dorsum (upper aspect). Improper shaping of the meatus can result in meatal stenosis.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:36434") AnnotationAssertion( "FMA:85265") AnnotationAssertion( "MA:0002642") AnnotationAssertion(Annotation( "FMA:85265") "external orifice of male urethra") AnnotationAssertion(Annotation( "FMA:85265") "external urethral orifice (male)") AnnotationAssertion(Annotation( "MA:0002642") "male urethra ostium") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) Annotation( ) "ostium urethrae externum (urethra masculina)") AnnotationAssertion(Annotation( "EMAPA:36434") "urethral meatus of penile urethra") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "EMAPA:36434") "distal urethral opening of male") AnnotationAssertion(Annotation( "EMAPA:36434") "urethral opening of penile urethra") AnnotationAssertion( "UBERON:0012241") AnnotationAssertion(rdfs:label "male urethral meatus") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (internal urethral orifice) AnnotationAssertion(Annotation( "MGI:anna"^^xsd:string) Annotation( "MP:0011782") "The usually crescent-shaped opening of the urinary bladder into the urethra, placed at the anteroinferior angle (apex) of the urinary bladder trigone.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:85263") AnnotationAssertion(Annotation( "FMA:85263") "internal meatus of urethra") AnnotationAssertion(Annotation( "FMA:85263") "internal urethral orifice of urinary bladder") AnnotationAssertion(Annotation( "FMA:85263") "internal urethral ostium") AnnotationAssertion(Annotation( "MP:0011782") Annotation( ) "orificium urethrae internum") AnnotationAssertion(Annotation( ) "ostium orificium internum") AnnotationAssertion(Annotation( ) Annotation( ) "ostium urethrae internum") AnnotationAssertion(Annotation( "FMA:85263") "vesicourethral orifice") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "MP:0011782") "internal urethral ostium") AnnotationAssertion(Annotation( "MP:0011782") "internal urinary meatus") AnnotationAssertion( "UBERON:0012242") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "internal urethral orifice") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (stratum intermedium of epidermis) AnnotationAssertion(Annotation( "ISBN:0073040584"^^xsd:string) "A temporary layer between old and new skin that is invalided by white blood cells[Kardong].") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0012244") AnnotationAssertion(rdfs:label "stratum intermedium of epidermis") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "ISBN:0073040584"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (thyroid follicular lumen) AnnotationAssertion(Annotation( ) "A follicular lumen is the closed cavity within a follicle of the thyroid gland. It is surrounded by follicular cells and filled with colloid, a concentrated solution of thyroglobulin.") AnnotationAssertion(Annotation( ) "follicular lumen") AnnotationAssertion( ) AnnotationAssertion( "FMA:68829") AnnotationAssertion(Annotation( "FMA:68829") "lumen of thyroid follicle") AnnotationAssertion(Annotation( "FMA:68829") "thyroid follicle lumen") AnnotationAssertion(Annotation( "FMA:68829") "thyroid follicular space") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0012246") AnnotationAssertion(rdfs:label "thyroid follicular lumen") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (cervical gland) AnnotationAssertion(Annotation( ) "Mucus-secreting glands in the mucosa of the uterine cervix.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "NCIT:C32296") AnnotationAssertion(Annotation( "ncithesaurus:Cervical_Gland") "UMLS:C2724437") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) "glandulae cervicales") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0012247") AnnotationAssertion(rdfs:label "cervical gland") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (cervical mucosa) AnnotationAssertion(Annotation( "BTO:0000411") "Lining of the head of the uterus (cervix); contains large branched glands; does not undergo sloughing.") AnnotationAssertion( "BTO:0000411") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0012248") AnnotationAssertion(rdfs:label "cervical mucosa") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (ectocervix) AnnotationAssertion(Annotation( ) Annotation( "BTO:0001850") "The part of the cervix uteri that protrudes into the vagina and is lined with stratified squamous epithelium.") AnnotationAssertion(Annotation( "FMA"^^xsd:string) "distinction between two FMA classes not clear - we merge them here") AnnotationAssertion( "UBERON:0010182") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0001850") AnnotationAssertion( "CALOHA:TS-1098") AnnotationAssertion( "FMA:77056") AnnotationAssertion( "FMA:86484") AnnotationAssertion( "NCIT:C12310") AnnotationAssertion(Annotation( "ncithesaurus:Ectocervix") "UMLS:C0227829") AnnotationAssertion(Annotation( "BTO:0001850") "ectocervix") AnnotationAssertion(Annotation( "FMA:86484") "ectocervix") AnnotationAssertion(Annotation( ) "portio vaginalis") AnnotationAssertion(Annotation( "BTO:0001850") Annotation( ) "portio vaginalis cervicis") AnnotationAssertion(Annotation( "CALOHA:TS-1098") "uterine ectocervix") AnnotationAssertion(Annotation( "FMA:77056") "vaginal part of cervix") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0001850") "exocervix") AnnotationAssertion( "UBERON:0012249") AnnotationAssertion(rdfs:label "ectocervix") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "BTO"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (cervix glandular epithelium) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A glandular epithelium that is part of a uterine cervix.") AnnotationAssertion(Annotation( ) "The 'glandular' or columnar epithelium of the cervix is located cephalad to the squamocolumnar junction. It covers a variable amount of the ectocervix and lines the endocervical canal. It is comprised of a single layer of mucin-secreting cells. The epithelium is thrown into longitudinal folds and invaginations that make up the so-called endocervical glands (they are not true glands). These infolding crypts and channels make the cytologic and colposcopic detection of neoplasia less reliable and more problematic. The complex architecture of the endocervical glands gives the columnar epithelium a papillary appearance through the colposcope and a grainy appearance upon gross visual inspection. The single cell layer allows the coloration of the underlying vasculature to be seen more easily. Therefore, the columnar epithelium appears more red in comparison with the more opaque squamous epithelium.") AnnotationAssertion( ) AnnotationAssertion( "NCIT:C54414") AnnotationAssertion(Annotation( "ncithesaurus:Cervix_Columnar_Epithelium") "UMLS:C1707350") AnnotationAssertion( "uberon") AnnotationAssertion( "cervix columnar epithelium") AnnotationAssertion( "UBERON:0012250") AnnotationAssertion(rdfs:label "cervix glandular epithelium") SubClassOf( ) SubClassOf( ) # Class: (ectocervical epithelium) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An epithelium that is part of a ectocervix.") AnnotationAssertion( ) AnnotationAssertion( "exocervical epithelium") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0012251") AnnotationAssertion(rdfs:label "ectocervical epithelium") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (endocervical epithelium) AnnotationAssertion(Annotation( "ncithesaurus:Endocervical_Glandular_Epithelium") "The glandular epithelium that lines the endocervix.") AnnotationAssertion( ) AnnotationAssertion( "NCIT:C96180") AnnotationAssertion( "endocervical glandular epithelium") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0012252") AnnotationAssertion(rdfs:label "endocervical epithelium") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (cervical squamo-columnar junction) AnnotationAssertion(Annotation( ) "Region of cervical epithelium where columnar epithelium of endocervic and the stratified non-keratinising squamous epithelium of the ectocervic meet.") AnnotationAssertion( "squamocolumnar junction") AnnotationAssertion( ) AnnotationAssertion( "NCIT:C97148") AnnotationAssertion( "squamo-columnar junction of uterine cervix") AnnotationAssertion( "squamocolumnar junction of uterine cervix") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0012253") AnnotationAssertion(rdfs:comment "Site of 90% of lower genital tract neoplasia. This junction is presumed, but not proven, to be the embryologic junction of the Müllerian and urogenital sinus epithelia.") AnnotationAssertion(rdfs:label "cervical squamo-columnar junction") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (abdominal aorta artery) AnnotationAssertion(Annotation( ) Annotation( ) "An artery that originates from the abdominal aorta.") AnnotationAssertion( ) AnnotationAssertion( "abdominal artery") AnnotationAssertion( "artery of abdomen") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0012254") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "abdominal aorta artery") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (inferior phrenic artery) AnnotationAssertion(Annotation( ) "The inferior phrenic arteries are two small vessels, which supply the diaphragm but present much variety in their origin. They may arise separately from the front of the aorta, immediately above the celiac artery, or by a common trunk, which may spring either from the aorta or from the celiac artery. Sometimes one is derived from the aorta, and the other from one of the renal arteries; they rarely arise as separate vessels from the aorta. They diverge from one another across the crura of the diaphragm, and then run obliquely upward and lateralward upon its under surface. The left phrenic passes behind the esophagus, and runs forward on the left side of the esophageal hiatus. The right phrenic passes behind the inferior vena cava, and along the right side of the foramen which transmits that vein. Near the back part of the central tendon each vessel divides into a medial and a lateral branch. The medial branch curves forward, and anastomoses with its fellow of the opposite side, and with the musculophrenic and pericardiacophrenic arteries. The lateral branch passes toward the side of the thorax, and anastomoses with the lower intercostal arteries, and with the musculophrenic. The lateral branch of the right phrenic gives off a few vessels to the inferior vena cava; and the left one, some branches to the esophagus. Each vessel gives off superior suprarenal branches to the suprarenal gland of its own side. The spleen and the liver also receive a few twigs from the left and right vessels respectively.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:14734") AnnotationAssertion(Annotation( ) Annotation( ) "arteriae phrenicae inferiores") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "inferior phrenic artery") AnnotationAssertion( "UBERON:0012255") AnnotationAssertion(rdfs:label "inferior phrenic artery") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/a/af/Gray531.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) # Class: (digestive syncytial vacuole) AnnotationAssertion( "cede to GO or CL") AnnotationAssertion(Annotation( ) ) AnnotationAssertion(Annotation( "WP"^^xsd:string) "in Aceola, Digestion is accomplished by means of a syncytium that forms a vacuole around ingested food. There are no epithelial cells lining the digestive vacuole, although there is sometimes a short pharynx leading from the mouth to the vacuole") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0012256") AnnotationAssertion(rdfs:label "digestive syncytial vacuole") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete equine cannon bone) AnnotationAssertion( "UBERON:0013583") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0012263") AnnotationAssertion(rdfs:label "obsolete equine cannon bone") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete equine forelimb cannon bone) AnnotationAssertion( "UBERON:0003647") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0012264") AnnotationAssertion(rdfs:label "obsolete equine forelimb cannon bone") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete equine hindlimb cannon bone) AnnotationAssertion( "UBERON:0003652") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0012265") AnnotationAssertion(rdfs:label "obsolete equine hindlimb cannon bone") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (forestomach-glandular stomach junction) AnnotationAssertion(Annotation( "MGI:anna"^^xsd:string) "The distinct low fold of tissue that separates the non-glandular area of the stomach (forestomach) from the glandular stomach; the limiting ridge extends circumferentially from the large curvature of the stomach to the small curvature, just below the esophagus; at the esophagus, the course of the limiting ridge bends into a U-shape and almost surrounds the esophageal opening.") AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37640") AnnotationAssertion( "MA:0003014") AnnotationAssertion( "uberon") AnnotationAssertion( "forestomach - glandular stomach squamocolumnar junction") AnnotationAssertion(Annotation( "MA:0003014") "limiting ridge of stomach") AnnotationAssertion( "margo plicatus") AnnotationAssertion( "squamo-columnar junction between forestomach and glandular stomach") AnnotationAssertion( "squamocolumnar junction with the glandular stomach") AnnotationAssertion( "UBERON:0012270") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "forestomach-glandular stomach junction") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (major duodenal papilla) AnnotationAssertion(Annotation( ) "The common bile duct and the pancreatic duct together perforate the medial side of the second portion of the duodenum obliquely, some 7 to 10 cm below the pylorus, forming a structure called the major duodenal papilla. The accessory pancreatic duct sometimes pierces it about 2 cm above and slightly in front of these.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:15074") AnnotationAssertion(Annotation( "FMA:15074") "greater duodenal papilla") AnnotationAssertion(Annotation( "FMA:15074") "tubercle of Vater") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "major papilla") AnnotationAssertion(Annotation( ) Annotation( ) "papilla duodeni major") AnnotationAssertion( "UBERON:0012271") AnnotationAssertion(rdfs:label "major duodenal papilla") SubClassOf( ) # Class: (minor duodenal papilla) AnnotationAssertion(Annotation( ) "The minor duodenal papilla is the opening of the accessory pancreatic duct into the duodenum. It is sometimes absent, and often nonfunctional.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:15075") AnnotationAssertion(Annotation( "FMA:15075") "Santorini's caruncle") AnnotationAssertion(Annotation( ) "Santorini's minor caruncle") AnnotationAssertion(Annotation( "FMA:15075") "lesser duodenal papilla") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "minor papilla") AnnotationAssertion( "UBERON:0012272") AnnotationAssertion(rdfs:label "minor duodenal papilla") SubClassOf( ) # Class: (periampullary region of duodenum) AnnotationAssertion( ) AnnotationAssertion( "NCIT:C60699") AnnotationAssertion(Annotation( "ncithesaurus:Periampullary_Region") "UMLS:C1882332") AnnotationAssertion( "periampullary region") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0012273") AnnotationAssertion(rdfs:label "periampullary region of duodenum") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (columnar epithelium) AnnotationAssertion(Annotation( ) "An epithelium that consists of columnar epithelial cells. Columnar epithelia are epithelial cells whose heights are at least four times their width. Columnar epithelia are divided into simple (or unilayered), and the rarer stratified (or multi-layered).[WP, modified].") AnnotationAssertion( ) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0012274") AnnotationAssertion(rdfs:label "columnar epithelium") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (meso-epithelium) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "Epithelium that derives from the mesoderm. [Automatically generated definition].") AnnotationAssertion( "FMA:86452") AnnotationAssertion( "mesoderm-derived epithelium") AnnotationAssertion( "mesoepithelium") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0012275") AnnotationAssertion(rdfs:label "meso-epithelium") SubClassOf( ) SubClassOf( ) # Class: (endometrium glandular epithelium) AnnotationAssertion( "EMAPA:35308") AnnotationAssertion( "FMA:86488") AnnotationAssertion( "MA:0002732") AnnotationAssertion(Annotation( "FMA:86488") "glandular part of endometrium") AnnotationAssertion( "uterine glands") AnnotationAssertion( "uterine glands set") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0012276") AnnotationAssertion(rdfs:label "endometrium glandular epithelium") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (gland of nasal mucosa) AnnotationAssertion(Annotation( ) "The nasal glands are the seromucous glands in the respiratory region of the nasal mucous membrane. The three major types of nasal glands are anterior serous glands, seromucous glands, and Bowman glands.") AnnotationAssertion( "nasal gland") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37871") AnnotationAssertion( "FMA:321518") AnnotationAssertion( "NCIT:C22725") AnnotationAssertion(Annotation( "ncithesaurus:Nose_Nasal_Cavity_Nasal_Gland_MMHCC") "UMLS:C1522269") AnnotationAssertion(Annotation( ) "glandula nasalis") AnnotationAssertion(Annotation( ) "glandulae nasales") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0012278") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "gland of nasal mucosa") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (chromaffin paraganglion) AnnotationAssertion(Annotation( ) Annotation( "MESH:A06.224.736") "Small bodies containing chromaffin cells occurring outside of the adrenal medulla, most commonly near the sympathetic ganglia and in organs such as the kidney, liver, heart and gonads.") AnnotationAssertion(Annotation( "ncithesaurus:Paraganglion") "paraganglion") AnnotationAssertion( ) AnnotationAssertion( "CALOHA:TS-2358") AnnotationAssertion( "MESH:D010233") AnnotationAssertion( "NCIT:C94826") AnnotationAssertion(Annotation( "ncithesaurus:Paraganglion") "UMLS:C0030419") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "MESH:A06.224.736") "chromaffin body") AnnotationAssertion(Annotation( "MESH:A06.224.736") Annotation( ) "chromaffin paraganglia") AnnotationAssertion(Annotation( "MESH:A06.224.736") "chromaffin paraganglion") AnnotationAssertion( "UBERON:0012279") AnnotationAssertion(rdfs:label "chromaffin paraganglion") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses( ) # Class: (mammary fat pad) AnnotationAssertion(Annotation( "MGI:csmith"^^xsd:string) "Encapsulated adipose tissue associated with the mammary gland.") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37901") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0012282") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "mammary fat pad") SubClassOf( ) SubClassOf( ) # Class: (femoral fat pad) AnnotationAssertion(Annotation( "MP:0008905") "Encapsulated adipose tissue associated with the femur.") AnnotationAssertion(Annotation( "MP:0008905") "femoral fat depot") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0012283") AnnotationAssertion(rdfs:label "femoral fat pad") SubClassOf( ) SubClassOf( ) # Class: (animal hemisphere) AnnotationAssertion(Annotation( "WP"^^xsd:string) "The animal pole consists of small cells that divide rapidly, in contrast with the vegetal pole below it.") AnnotationAssertion(Annotation( "XAO"^^xsd:string) "the XAO class is specific to the zygote.") AnnotationAssertion( "AAO:0010325") AnnotationAssertion( "XAO:0000202") AnnotationAssertion( "animal pole of blastomere") AnnotationAssertion( "animal pole of zygote") AnnotationAssertion( "uberon") AnnotationAssertion( "animal pole") AnnotationAssertion( "UBERON:0012284") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "animal hemisphere") SubClassOf( ) # Class: (vegetal hemisphere) AnnotationAssertion(Annotation( "WP"^^xsd:string) "The vegetal pole contains large yolky cells that divide very slowly, in contrast with the animal pole above it.") AnnotationAssertion( "AAO:0010331") AnnotationAssertion( "XAO:0000280") AnnotationAssertion( "vegetal pole of blastomere") AnnotationAssertion( "vegetal pole of zygote") AnnotationAssertion( "uberon") AnnotationAssertion( "vegetal pole") AnnotationAssertion( "UBERON:0012285") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "vegetal hemisphere") SubClassOf( ) # Class: (hemisphere of embryo) AnnotationAssertion(Annotation( ) Annotation( ) "One of two hemispheres of the embryo at the zygote or blastula stage[WP,modified].") AnnotationAssertion( "Like many of the early_development classes in this ontology, this class requires review for its applicability across vertebrates. See the tracker item for further discussion.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:293351") AnnotationAssertion( "uberon") AnnotationAssertion( "pole of embryo") AnnotationAssertion( "UBERON:0012286") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "hemisphere of embryo") AnnotationAssertion( "Oocyte:Poles.jpg"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "XAO"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (Rathkes pouch epithelium) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An epithelial sac that is part of a Rathke's pouch.") AnnotationAssertion( "See https://github.com/obophenotype/uberon/issues/1305") AnnotationAssertion( "EHDAA2:0001473") AnnotationAssertion( "EMAPA:25036") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0012287") AnnotationAssertion(rdfs:label "Rathkes pouch epithelium") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (centroquartal bone) AnnotationAssertion(Annotation( "UBERON:skansa") "A tarsal bone that is formed from the fusion of the central and 4th tarsal bones.") AnnotationAssertion(Annotation( "NominaAnatomicaVeterinaria:2005"^^xsd:string) Annotation( ) "os centroquartale") AnnotationAssertion(Annotation( "NominaAnatomicaVeterinaria:2005"^^xsd:string) Annotation( ) "os naviculocuboideum") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0012288") AnnotationAssertion(rdfs:label "centroquartal bone") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (fused tarsal bones 2 and 3) AnnotationAssertion(Annotation( "UBERON:skansa") "A tarsal bone that is formed from the fusion of the 2nd and 3rd tarsal bones.") AnnotationAssertion( "fused tarsals 2 and 3") AnnotationAssertion(Annotation( "NominaAnatomicaVeterinaria:2005"^^xsd:string) Annotation( ) "os cuneiforme intermediolaterale") AnnotationAssertion(Annotation( "NominaAnatomicaVeterinaria:2005"^^xsd:string) Annotation( ) "os tarsale II et III") AnnotationAssertion( "uberon") AnnotationAssertion( "tarsals 2+3") AnnotationAssertion( "UBERON:0012289") AnnotationAssertion(rdfs:label "fused tarsal bones 2 and 3") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (fused carpal bones 2 and 3) AnnotationAssertion(Annotation( "UBERON:skansa") "A carpal bone that is formed from the fusion of the 2nd and 3rd distal carpal bones.") AnnotationAssertion( "fused carpals 2 and 3") AnnotationAssertion( "uberon") AnnotationAssertion( "carpals 2+3") AnnotationAssertion( "UBERON:0012290") AnnotationAssertion(rdfs:label "fused carpal bones 2 and 3") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lateral malleolus of fibula) AnnotationAssertion(Annotation( ) "Malleolus is the name for the bony prominence on each side of the ankle.") AnnotationAssertion(Annotation( "NCBITaxon:9895") Annotation( "UBERON:0004410") Annotation( "UBERON:skansa") "In bovids, the distal end of the fibula is present only as the lateral malleolus, a separate bone that articulates with the lateral side of the distal tibia.") AnnotationAssertion(Annotation( "FMA:35502") "lateral malleolus") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37893") AnnotationAssertion( "FMA:35502") AnnotationAssertion(Annotation( ) "malleolar bone") AnnotationAssertion(Annotation( ) "malleolar bone of ankle") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "distal extremity of fibula") AnnotationAssertion(Annotation( ) "external malleolus of fibula") AnnotationAssertion( "fibular malleolus") AnnotationAssertion( "UBERON:0012291") AnnotationAssertion(rdfs:label "lateral malleolus of fibula") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (embryonic cloacal fold) AnnotationAssertion(Annotation( "MP:0011836") Annotation( "MP:anna"^^xsd:string) "One of the pair of mesenchymal swellings (folds) located on either side of the cloacal membrane during the indifferent stage of embryonic development; cranial to the cloacal membrane the folds unite to form the genital tubercle; caudally the folds are subdivided into urogenital folds anteriorly and anal folds posteriorly.") AnnotationAssertion(Annotation( "EHDAA2:0004009") "cloacal fold") AnnotationAssertion( "EHDAA2:0004009") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0012292") AnnotationAssertion(rdfs:comment "We presume this is distinct from AAO:0001003, an external integumentary structure - check with amphibian anatomy ontology developers. AO notes: the text def states mesenchymal swelling, EHDAA2 splits into mesenchymal and epithelial parts") AnnotationAssertion(rdfs:label "embryonic cloacal fold") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (anal fold) AnnotationAssertion(Annotation( ) "A slight elevation flanking the cloacal membrane and derived from a cloacal fold; anal folds form the border of the anus.") AnnotationAssertion( "EHDAA2:0004012") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37392") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0012293") AnnotationAssertion(rdfs:label "anal fold") SubClassOf(Annotation( "EHDAA2"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (navicular fossa of spongiose part of urethra) AnnotationAssertion(Annotation( ) Annotation( "MP:0011838") Annotation( "MP:anna"^^xsd:string) "The dilated terminal portion of the male spongy urethra located in the glans penis right before the external urethral orifice, also referred to as the most distal pendulous urethra; it is lined by stratified squamous, non-keratinizing epithelium; during development, the glans of the penis is initially solid but cannulates to give rise to the navicular fossa.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:19722") AnnotationAssertion( "fossa navicularis of urethra") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) "fossa navicularis urethrae") AnnotationAssertion(Annotation( "FMA:19722") "fossa navicularis urethrae (pars spongiosa, urethra masculina)") AnnotationAssertion(Annotation( "FMA:19722") "navicular fossa") AnnotationAssertion( "navicular fossa of urethra") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "fossa navicularis urethrae") AnnotationAssertion( "UBERON:0012294") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "navicular fossa of spongiose part of urethra") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (Guérin's valve) AnnotationAssertion(Annotation( ) Annotation( "MP:0011839") Annotation( "MP:anna"^^xsd:string) "An inconstant fold or valve of mucous membrane sometimes found in the root or upper wall of the navicular fossa of the urethra.") AnnotationAssertion( ) AnnotationAssertion( "FMA:19781") AnnotationAssertion( "Guerin's valve") AnnotationAssertion(Annotation( ) "Guérin's fold") AnnotationAssertion(Annotation( "MP:anna"^^xsd:string) "Guérin's valvule") AnnotationAssertion(Annotation( "MP:anna"^^xsd:string) "urethral valve of Guérin") AnnotationAssertion( "valve of fossa navicularis of urethra") AnnotationAssertion(Annotation( "MP:anna"^^xsd:string) Annotation( ) "valvula fossae navicularis") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0012295") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "Guérin's valve") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (urethral crest) AnnotationAssertion(Annotation( ) Annotation( "MP:0011840") Annotation( "MP:anna"^^xsd:string) "A longitudinal mucosal fold in the dorsal wall of the urethra[MP].") AnnotationAssertion(Annotation( "FMA"^^xsd:string) "in the FMA this is part of the prostatic urethra - but this leads to inconsistencies as 'urethral crest' in sex-neutral, with male and female subtypes") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:19718") AnnotationAssertion( "crista of urethra") AnnotationAssertion(Annotation( "MP:anna"^^xsd:string) Annotation( ) "crista urethralis") AnnotationAssertion( "urethral crista") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0012296") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "urethral crest") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (male urethral crest) AnnotationAssertion(Annotation( "MP:0011841") Annotation( "MP:anna"^^xsd:string) "Narrow longitudinal fold of mucosa on the posterior wall of the male urethra, extending from the uvula of the bladder through the prostatic urethra; when distended, it may serve to prevent the passage of the semen backward into the bladder; on either side of the male urethral crest is a slightly depressed fossa, the prostatic sinus, the floor of which is perforated by the orifices of the prostatic ducts from the lateral lobes of the prostate; the ducts of the middle lobe open behind the crest; at the forepart of the crest, below its summit, is a median elevation, the colliculus seminalis, upon or within the margins of which are the orifices of the prostatic utricle and the slit-like openings of the ejaculatory ducts[MP].") AnnotationAssertion( ) AnnotationAssertion( "FMA:85270") AnnotationAssertion(Annotation( "MP:anna"^^xsd:string) Annotation( ) "crista phallica") AnnotationAssertion(Annotation( "MP:anna"^^xsd:string) Annotation( ) "crista urethralis masculinae") AnnotationAssertion(Annotation( "FMA:85270") "urethral crest (male)") AnnotationAssertion(Annotation( "MP:anna"^^xsd:string) "urethral crest of male") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0012297") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "male urethral crest") SubClassOf( ) SubClassOf(Annotation( "cjm"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (female urethral crest) AnnotationAssertion(Annotation( "MP:0011842") Annotation( "MP:anna"^^xsd:string) "The conspicuous longitudinal fold of mucosa on the posterior wall of the female urethra[MP].") AnnotationAssertion( ) AnnotationAssertion( "FMA:85271") AnnotationAssertion(Annotation( "MP:anna"^^xsd:string) Annotation( ) "crista urethralis femininae") AnnotationAssertion(Annotation( "FMA:85271") "urethral crest (female)") AnnotationAssertion(Annotation( "MP:anna"^^xsd:string) "urethral crest of female") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0012298") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "female urethral crest") SubClassOf( ) SubClassOf(Annotation( "cjm"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (mucosa of urethra) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A mucosa that is part of a urethra.") AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37912") AnnotationAssertion( "FMA:76904") AnnotationAssertion(Annotation( "FMA:76904") "mucous membrane of urethra") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) "tunica mucosa urethrae") AnnotationAssertion(Annotation( "FMA:76904") "urethral mucosa") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0012299") AnnotationAssertion(rdfs:label "mucosa of urethra") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (limb paddle) AnnotationAssertion(Annotation( "MP:0011685") "A transient developing limb structure that develops from the limb bud; it is a dorsoventral flattening of the limb bud structure and develops into the foot plate.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0012300") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "limb paddle") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (female membranous urethra) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A membranous urethra of male or female that is part of a female urethra.") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37537") AnnotationAssertion( "MA:0002638") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0012301") AnnotationAssertion(rdfs:label "female membranous urethra") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (male membranous urethra) AnnotationAssertion(Annotation( "MGI:anna"^^xsd:string) Annotation( "MP:0011778") "The shortest, least dilatable, and, with the exception of the external orifice, the narrowest part of the male urethral canal located in the deep perineal pouch and lined by pseudostratified columnar epithelium; it extends downward and forward, with a slight anterior concavity, between the apex of the prostate and the bulb of the urethra, perforating the urogenital diaphragm below and behind the pubic symphysis; the membranous portion of the urethra is completely surrounded by the fibers of the sphincter urethrae membranaceae; on either side near its termination are the bulbourethral glands.") AnnotationAssertion(Annotation( "FMA:19674") Annotation( ) "membranous urethra") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:19674") AnnotationAssertion( "MA:0002641") AnnotationAssertion( "NCIT:C33091") AnnotationAssertion(Annotation( "ncithesaurus:Membranous_Urethra") "UMLS:C0458453") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "intermediate part of male urethra") AnnotationAssertion(Annotation( ) Annotation( ) "pars intermedia urethrae masculinae") AnnotationAssertion(Annotation( ) Annotation( ) "pars membranacea urethrae masculinae") AnnotationAssertion( "UBERON:0012302") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "male membranous urethra") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/d/d7/Gray1142.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (ureteral orifice) AnnotationAssertion(Annotation( ) Annotation( "MP:0011783") "The slit-like opening of either ureter into the bladder; normally, the two ureteral orifices are placed at the posterolateral angles of the urinary bladder trigone while the internal urethral orifice is placed at its anteroinferior angle (apex); wide gaping usually indicates vesicoureteral reflux.") AnnotationAssertion( "TODO - add relationship to junction") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:77047") AnnotationAssertion( "NCIT:C12337") AnnotationAssertion(Annotation( "FMA:77047") "Mercier's bar") AnnotationAssertion(Annotation( "FMA:77047") "orifice of ureter") AnnotationAssertion(Annotation( "MP:0011783") Annotation( ) "orificium ureteris") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) "ostium ureteris") AnnotationAssertion(Annotation( "MP:0011783") Annotation( ) "ostium ureteris") AnnotationAssertion(Annotation( "MP:0011783") "ureteral meatus") AnnotationAssertion(Annotation( "MP:0011783") "ureteral opening") AnnotationAssertion(Annotation( "FMA:77047") "ureteric orifice") AnnotationAssertion(Annotation( "MP:0011783") "ureteric orifice") AnnotationAssertion(Annotation( "FMA:77047") "ureteric ostium") AnnotationAssertion(Annotation( "FMA:77047") "ureterovesical orifice") AnnotationAssertion(Annotation( "MP:0011783") "ureterovesical orifice") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0012303") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "ureteral orifice") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (nasal diverticulum) AnnotationAssertion(Annotation( "ISBN:3899930983") Annotation( "MURDOCH:1367") "Caudally blind-ending cutaneous pouch lined with skin that occupies the nasoincisive notch. It's ventral and medial walls is formed by the alar fold. It's lateral wall is formed by the external nares and it's dorsal wall is formed by the straight fold. Lined by pigmented predominantly hairless skin. It has an external opening located on the dorsolateral aspect of the "true nostril". When the horse is exercising, obliteration of the nasal diverticulum greatly widens the nostrils increasing air intake[MURDOCH].") AnnotationAssertion( "uberon") AnnotationAssertion( "false nostril") AnnotationAssertion(Annotation( "ISBN:3899930983") "nasal trumpet") AnnotationAssertion(Annotation( "ISBN:3899930983") "soft nose") AnnotationAssertion( "UBERON:0012304") AnnotationAssertion(rdfs:label "nasal diverticulum") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (marginal cutaneous pouch of ear) AnnotationAssertion(Annotation( "ISBN:9783899930993") "A fold of skin at the caudal border of the auricle.") AnnotationAssertion( "uberon") AnnotationAssertion( "cutaneous marginal pouch") AnnotationAssertion( "marginal cutaneous pouch") AnnotationAssertion( "UBERON:0012305") AnnotationAssertion(rdfs:label "marginal cutaneous pouch of ear") SubClassOf( ) # Class: (lateral cervical lymph node) AnnotationAssertion(Annotation( ) Annotation( ) "A cervical lymph nodes are found in proximity to an internal or external jugular vein.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:61232") AnnotationAssertion(Annotation( "FMA:61232") "lateral cervical node") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0012306") AnnotationAssertion(rdfs:label "lateral cervical lymph node") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (anterior cervical lymph node) AnnotationAssertion(Annotation( ) Annotation( ) "The anterior cervical lymph nodes are a group of nodes found on the anterior part of the neck.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:61230") AnnotationAssertion( "anterior cervical node") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0012307") AnnotationAssertion(rdfs:label "anterior cervical lymph node") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (superficial lateral cervical lymph node) AnnotationAssertion(Annotation( ) "The superficial lateral cervical lymph nodes are found in proximity to the external jugular vein.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:12769") AnnotationAssertion(Annotation( "FMA:12769") "superficial lateral cervical node") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0012308") AnnotationAssertion(rdfs:label "superficial lateral cervical lymph node") SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (superficial anterior cervical lymph node) AnnotationAssertion(Annotation( ) "The superficial anterior cervical lymph nodes are found in proximity to the anterior jugular vein.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:12776") AnnotationAssertion(Annotation( "FMA:12776") "anterior jugular lymph node") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0012309") AnnotationAssertion(rdfs:label "superficial anterior cervical lymph node") SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (deep lateral cervical lymph node) AnnotationAssertion(Annotation( ) "The deep lateral cervical lymph nodes are found near the upper part of the internal jugular vein in the neck, lateral or posterior to the carotid sheath.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:12770") AnnotationAssertion(Annotation( "FMA:12770") "deep lateral cervical node") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0012310") AnnotationAssertion(rdfs:label "deep lateral cervical lymph node") SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (deep anterior cervical lymph node) AnnotationAssertion(Annotation( ) "The deep anterior cervical lymph nodes are found near the middle cricothyroid ligament and the trachea.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:12779") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0012311") AnnotationAssertion(rdfs:label "deep anterior cervical lymph node") SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (maxillary process ectoderm) AnnotationAssertion( "EHDAA2:0004599") AnnotationAssertion( "EMAPA:17637") AnnotationAssertion( "FMA:312685") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0012312") AnnotationAssertion(rdfs:label "maxillary process ectoderm") SubClassOf(Annotation( "EHDAA2"^^xsd:string) ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (1st arch maxillary ectoderm) AnnotationAssertion( "EHDAA2:0000039") AnnotationAssertion( "EMAPA:16389") AnnotationAssertion(Annotation( "EMAPA:16389") "ectoderm of maxillary component") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0012313") AnnotationAssertion(rdfs:label "1st arch maxillary ectoderm") SubClassOf(Annotation( "EHDAA2"^^xsd:string) ) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (embryonic facial prominence) AnnotationAssertion(Annotation( ) "One of five swellings formed during the development of the face.") AnnotationAssertion( ) AnnotationAssertion( "FMA:293103") AnnotationAssertion( "uberon") AnnotationAssertion( "embryonic facial process") AnnotationAssertion( "facial primordium") AnnotationAssertion( "primordium of face") AnnotationAssertion( "UBERON:0012314") AnnotationAssertion(rdfs:label "embryonic facial prominence") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (incisive foramen) AnnotationAssertion(Annotation( ) Annotation( ) "The point where the primary palate and both palatine shelves fuse.") AnnotationAssertion( ) AnnotationAssertion( "FMA:75305") AnnotationAssertion(Annotation( "FMA:75305") "Stenson's foramen") AnnotationAssertion(Annotation( "FMA:75305") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "foramina incisivum") AnnotationAssertion(Annotation( "FMA:75305") "nasopalatine foramen") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "foramina incisiva") AnnotationAssertion(Annotation( ) "incisive foramina") AnnotationAssertion(Annotation( ) "incisive fossa") AnnotationAssertion( "UBERON:0012315") AnnotationAssertion(rdfs:label "incisive foramen") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (vagina orifice) AnnotationAssertion(Annotation( "MGI:anna"^^xsd:string) Annotation( "MGI:csmith"^^xsd:string) Annotation( "MP:0001142") "The median slit located inferior and posterior to the external urethral orifice in the female; the exit for menstrual flow and birth and the entrance for the penis during sexual intercourse; the size and appearance of the vaginal orifice varies inversely with that of the hymen (G. membrane), a thin fold of mucous membrane that surrounds the vaginal orifice.") AnnotationAssertion(Annotation( "FMA:19984") "introitus") AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37983") AnnotationAssertion( "FMA:19984") AnnotationAssertion( "opening of vagina") AnnotationAssertion(Annotation( "FMA:19984") "orifice of vagina") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) "ostium vaginae") AnnotationAssertion(Annotation( "MP:0001142") "vagina opening") AnnotationAssertion(Annotation( "FMA:19984") "vaginal orifice") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:19984") Annotation( ) "introitus") AnnotationAssertion(Annotation( "MP:0001142") "introitus of vagina") AnnotationAssertion( "vaginal introitus") AnnotationAssertion( "UBERON:0012317") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "vagina orifice") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (anterior ethmoidal artery) AnnotationAssertion(Annotation( ) "The anterior ethmoidal artery, also anterior ethmoid artery is an artery of the head. Once branching from the ophthalmic artery, it accompanies the nasociliary nerve through the anterior ethmoidal canal to supply the anterior and middle ethmoidal cells, frontal sinus, and anterosuperior aspect of the lateral nasal wall[WP].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:49986") AnnotationAssertion(Annotation( ) Annotation( ) "a. ethmoidalis anterior") AnnotationAssertion(Annotation( ) Annotation( ) "arteria ethmoidalis anterior") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "anterior ethmoid artery") AnnotationAssertion(Annotation( ) "anterior meningeal arteries") AnnotationAssertion(Annotation( ) "anterior meningeal artery") AnnotationAssertion( "UBERON:0012318") AnnotationAssertion(rdfs:label "anterior ethmoidal artery") SubClassOf( ) DisjointClasses(Annotation( "lexical"^^xsd:string) ) # Class: (posterior ethmoidal artery) AnnotationAssertion(Annotation( ) "The posterior ethmoidal artery is an artery of the head. It is smaller than the anterior ethmoidal artery, branches off from the ophthalmic artery when it reaches the medial wall of the orbit.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:49989") AnnotationAssertion(Annotation( ) Annotation( ) "a. ethmoidalis posterior") AnnotationAssertion(Annotation( ) Annotation( ) "arteria ethmoidalis posterior") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "posterior ethmoidal vessel") AnnotationAssertion( "UBERON:0012319") AnnotationAssertion(rdfs:label "posterior ethmoidal artery") SubClassOf( ) # Class: (cervical artery) AnnotationAssertion(Annotation( ) "An artery of the neck.") AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37075") AnnotationAssertion( "NCIT:C52850") AnnotationAssertion(Annotation( "ncithesaurus:Cervical_Artery") "UMLS:C1707349") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0012320") AnnotationAssertion(rdfs:label "cervical artery") SubClassOf( ) SubClassOf( ) # Class: (deep cervical artery) AnnotationAssertion(Annotation( ) "The deep cervical artery (Profunda cervicalis) is an artery of the neck.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:10659") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "profunda cervicalis") AnnotationAssertion( "UBERON:0012321") AnnotationAssertion(rdfs:label "deep cervical artery") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (ascending cervical artery) AnnotationAssertion(Annotation( ) "The ascending cervical artery is a small branch which arises from the inferior thyroid artery as that vessel is passing behind the carotid sheath; it runs up on the anterior tubercles of the transverse processes of the cervical vertebrC& in the interval between the Scalenus anterior and Longus capitis. To the muscles of the neck it gives twigs which anastomose with branches of the vertebral, and it sends one or two spinal branches into the vertebral canal through the intervertebral foramina to be distributed to the medulla spinalis and its membranes, and to the bodies of the vertebrC&, in the same manner as the spinal branches from the vertebral. It anastomoses with the ascending pharyngeal and occipital arteries.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:52489") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "ascending cervical") AnnotationAssertion( "UBERON:0012322") AnnotationAssertion(rdfs:label "ascending cervical artery") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA"^^xsd:string) Annotation( "Wikipedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (transverse cervical artery) AnnotationAssertion(Annotation( ) "The transverse cervical artery (transverse artery of neck, transversa colli artery) is a branch of the thyrocervical trunk, running at a higher level than the suprascapular artery.") AnnotationAssertion(Annotation( "MA"^^xsd:string) "Unclear if MA class belongs here or in parent") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:10664") AnnotationAssertion( "MA:0001936") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "cervical artery") AnnotationAssertion(Annotation( "MA:0001936") "cervical artery") AnnotationAssertion(Annotation( ) "cervical transverse artery") AnnotationAssertion(Annotation( ) "descending branch of the transverse cervical") AnnotationAssertion(Annotation( ) "transversalis artery colli") AnnotationAssertion(Annotation( ) "transversalis colli artery") AnnotationAssertion(Annotation( ) "transverse cervical") AnnotationAssertion(Annotation( ) "transverse cervical vessels") AnnotationAssertion( "UBERON:0012324") AnnotationAssertion(rdfs:label "transverse cervical artery") SubClassOf( ) # Class: (gubernacular bulb) AnnotationAssertion(Annotation( ) Annotation( "ISBN:0123971756") "The caudal, swollen portion of the gubernaculum.") AnnotationAssertion( "In rodents, during inguinoscrotal descent the gubernaculum regresses and the bulb prolapses, forming the vaginal process[ISBN:0123971756]") AnnotationAssertion( "Hrabovszky et al propose the bulb is the growing end of the elongating gubernaculum, analogous to the growth of a limb bud[PMID:11997885]") AnnotationAssertion( "bulb of gubernaculum") AnnotationAssertion(Annotation( ) "pars infravaginalis gubernaculi") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0012326") AnnotationAssertion(rdfs:label "gubernacular bulb") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pearly penile papule) AnnotationAssertion(Annotation( ) "Small saliences on the ridge of the glans of the male genital organs.") AnnotationAssertion(Annotation( ) ) AnnotationAssertion( ) AnnotationAssertion( "FMA:19653") AnnotationAssertion(Annotation( ) Annotation( ) "hirsuties coronae glandis") AnnotationAssertion(Annotation( ) "hirsutoid papilloma") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:19653") Annotation( ) "preputial gland of penis") AnnotationAssertion( "UBERON:0012327") AnnotationAssertion(rdfs:label "pearly penile papule") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (keratinized stratified squamous epithelium) AnnotationAssertion(Annotation( ) Annotation( "FMA:45568") "Keratinized stratified squamous epithelium is a stratified squamous epithelium, the cells of which synthesize and accumulate keratin.") AnnotationAssertion( ) AnnotationAssertion( "FMA:45568") AnnotationAssertion(Annotation( "FMA:45568") Annotation( ) "epithelium stratificatum squamosum cornificatum") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0012329") AnnotationAssertion(rdfs:label "keratinized stratified squamous epithelium") SubClassOf( ) # Class: (nasal-associated lymphoid tissue) AnnotationAssertion(Annotation( "ncithesaurus:Nasal-Associated_Lymphoid_Tissue") "The lymphocytic cell population present in the mucosa of the nasopharyngeal duct of some animals.") AnnotationAssertion( ) AnnotationAssertion( "FMA:79771") AnnotationAssertion( "MA:0003030") AnnotationAssertion( "NCIT:C77659") AnnotationAssertion(Annotation( "ncithesaurus:Nasal-Associated_Lymphoid_Tissue") "UMLS:C2698431") AnnotationAssertion(Annotation( ) Annotation( ) "NALT") AnnotationAssertion(Annotation( "FMA:79771") "naso-pharyngeal lymphoid tissue") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0012330") AnnotationAssertion(rdfs:label "nasal-associated lymphoid tissue") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) # Class: (mesosalpinx) AnnotationAssertion(Annotation( ) "The mesosalpinx is part of the lining of the abdominal cavity in higher vertebrates, specifically the portion of the broad ligament that stretches from the uterine tube to the level of the ovary.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:19808") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0012331") AnnotationAssertion(rdfs:label "mesosalpinx") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (broad ligament of uterus) AnnotationAssertion(Annotation( ) Annotation( "MESH:A02.513.170") "A broad fold of peritoneum that extends from the side of the uterus to the wall of the pelvis.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:16516") AnnotationAssertion( "MESH:D001956") AnnotationAssertion( "NCIT:C12318") AnnotationAssertion(Annotation( "ncithesaurus:Broad_Ligament") "UMLS:C0006205") AnnotationAssertion(Annotation( "FMA:16516") "broad uterine ligament") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "MESH:A02.513.170") "broad ligament") AnnotationAssertion(Annotation( ) "ligamentum latum uteri") AnnotationAssertion( "UBERON:0012332") AnnotationAssertion(rdfs:label "broad ligament of uterus") SubClassOf(Annotation( "MESH"^^xsd:string) ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (ovarian bursa) AnnotationAssertion(Annotation( ) "A pouch formed by the mesosalpinx and the mesovarium that encloses the infundibulum of the uterine tube and the ovary.") AnnotationAssertion( ) AnnotationAssertion( "MA:0003036") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0012333") AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "Ovaries of some animals are surrounded by a thin membranous sac, the bursa, and are isolated from the peritoneal cavity. The bursa is continuous with the orifice of the oviduct. The bursa is not continuous in other mammals (eg., farm animals and human beings); ovaries of these species can be exposed within the abdomen, and thus ectopic pregnancy is possible[http://www.uwyo.edu/wjm/repro/femanat.htm]") AnnotationAssertion(rdfs:label "ovarian bursa") SubClassOf( ) # Class: (perianal skin) AnnotationAssertion(Annotation( ) "A zone of skin that is part of the area surrounding the anus.") AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37715") AnnotationAssertion( "FMA:29350") AnnotationAssertion( "MA:0003046") AnnotationAssertion( "skin of perianal area") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0012336") AnnotationAssertion(rdfs:label "perianal skin") SubClassOf( ) SubClassOf(Annotation( "MA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (cauda equina) AnnotationAssertion(Annotation( ) "The cauda equina is a structure within the lower end of the spinal column of most vertebrates, that consists of nerve roots and rootlets from above. The space in which the cerebrospinal fluid is present is actually an extension of the subarachnoid space.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37468") AnnotationAssertion( "FMA:52590") AnnotationAssertion( "MA:0003045") AnnotationAssertion( "MESH:D002420") AnnotationAssertion( "NCIT:C12689") AnnotationAssertion(Annotation( "ncithesaurus:Cauda_Equina") "UMLS:C0007458") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "MESH:A08.800.800.720.725.150") "filum terminale") AnnotationAssertion( "UBERON:0012337") AnnotationAssertion(rdfs:label "cauda equina") SubClassOf( ) SubClassOf(Annotation( "MESH"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (holocrine gland) AnnotationAssertion(Annotation( "MP:0013543") "Any exocrine gland whose secretion consists of its own disintegrated secretory cells along with its secretory product; holocrine secretions are produced in the cytoplasm of the cell and released by the rupture of the plasma membrane, which destroys the cell and results in the secretion of the product into the lumen.") AnnotationAssertion( ) AnnotationAssertion( "BTO:0002325") AnnotationAssertion( "MA:0003042") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0012344") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "holocrine gland") SubClassOf(Annotation( "MA"^^xsd:string) Annotation( "MP"^^xsd:string) ) # Class: (autopod pad) AnnotationAssertion(Annotation( ) Annotation( ) "Pigmented, keratinised, hairless epidermis covering subcutaneous, collagenous, and adipose tissue.") AnnotationAssertion( "See https://github.com/obophenotype/uberon/issues/1305") AnnotationAssertion( "uberon") AnnotationAssertion( "paw pad") AnnotationAssertion( "UBERON:0012348") AnnotationAssertion(rdfs:label "autopod pad") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/8/8d/Paw_and_pads.jpg"^^xsd:anyURI) SubClassOf( ) # Class: (digital pad) AnnotationAssertion(Annotation( "MURDOCH:611") "A thick spongy structure at the base of the autopod, centred over the flexor surfaces of the distal interphalangeal joints.") AnnotationAssertion( "acropodial pad") AnnotationAssertion( "acropodium pad") AnnotationAssertion( "interdigital pad") AnnotationAssertion( "uberon") AnnotationAssertion( "digital cushion") AnnotationAssertion(Annotation( ) "digital pads") AnnotationAssertion( "UBERON:0012349") AnnotationAssertion(rdfs:comment "May be fused") AnnotationAssertion(rdfs:label "digital pad") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (carpal pad) AnnotationAssertion(Annotation( ) "An autopod pad found in the carpal region of a manus. Used for additional traction when stopping or descending a slope in digitigrade species.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0012350") AnnotationAssertion(rdfs:label "carpal pad") SubClassOf( ) SubClassOf( ) # Class: (urachal lumen) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An anatomical space that is enclosed by a urachus.") AnnotationAssertion( "urachus lumen") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0012351") AnnotationAssertion(rdfs:label "urachal lumen") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (mesangial matrix) AnnotationAssertion(Annotation( "MP:0011338") "Extracellular matrix secreted by intraglomerular mesangial cells.") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37907") AnnotationAssertion(Annotation( "MP:0011338") "extracellular mesangial matrix") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0012352") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "mesangial matrix") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (acropodium region) AnnotationAssertion(Annotation( ) "The segment of the autopod that is distal to the metapodial region and consists of the digits.") AnnotationAssertion( "class refers to an entire limb segment, not just the bones") AnnotationAssertion( "acropodial limb segment") AnnotationAssertion( "acropodial region") AnnotationAssertion( "acropodial segment of autopod") AnnotationAssertion( "set of digits") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0012354") AnnotationAssertion(rdfs:label "acropodium region") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (manual acropodium region) AnnotationAssertion(Annotation( ) "The segment of the manus that is distal to the metacarpal region and consists of the manual digits (fingers).") AnnotationAssertion( "class refers to an entire limb segment, not just the bones") AnnotationAssertion( "FMA:75592") AnnotationAssertion( "acropodial hindlimb segment") AnnotationAssertion( "acropodial region of manus") AnnotationAssertion( "acropodial segment of manus") AnnotationAssertion( "all fingers") AnnotationAssertion( "anterior acropodium region") AnnotationAssertion( "anterior acropodium segment of limb") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) "digiti manus") AnnotationAssertion(Annotation( "FMA:75592") "digits of hand") AnnotationAssertion(Annotation( "FMA:75592") "fingers including thumb") AnnotationAssertion(Annotation( "FMA:75592") "fingers set") AnnotationAssertion( "manual acropodium region") AnnotationAssertion( "manual acropodium segment of limb") AnnotationAssertion(Annotation( "FMA:75592") "set of digits of hand") AnnotationAssertion(Annotation( "FMA:75592") "set of fingers") AnnotationAssertion( "uberon") AnnotationAssertion( "anterior acropodium") AnnotationAssertion( "manual acropodium") AnnotationAssertion( "UBERON:0012355") AnnotationAssertion(rdfs:label "manual acropodium region") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pedal acropodium region) AnnotationAssertion(Annotation( ) "The segment of the pes that is distal to the metatarsal region and consists of the pedal digits (toes).") AnnotationAssertion( "class refers to an entire limb segment, not just the bones") AnnotationAssertion( ) AnnotationAssertion( "FMA:70664") AnnotationAssertion( "acropodial forelimb segment") AnnotationAssertion( "acropodial region of pes") AnnotationAssertion( "acropodial segment of pes") AnnotationAssertion( "all toes") AnnotationAssertion(Annotation( "FMA:70664") "digits of foot") AnnotationAssertion( "pedal acropodium region") AnnotationAssertion(Annotation( "FMA:70664") "set of toes") AnnotationAssertion(Annotation( "FMA:70664") "toes set") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:70664") "toes") AnnotationAssertion( "UBERON:0012356") AnnotationAssertion(rdfs:label "pedal acropodium region") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (digitopodium bone) AnnotationAssertion(Annotation( ) "A bone that is part of a the digitopodium skeleton - i.e. the acropodial skeleton or the metapodial skeleton.") AnnotationAssertion( ) AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "digit bone") AnnotationAssertion( "UBERON:0012357") AnnotationAssertion(rdfs:label "digitopodium bone") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (manual digitopodium bone) AnnotationAssertion(Annotation( ) "A bone that is part of a the manual digitopodium skeleton - i.e. the fingers or the metacarpal skeleton.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "bone of forelimb digitopodium") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0012358") AnnotationAssertion(rdfs:label "manual digitopodium bone") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pedal digitopodium bone) AnnotationAssertion(Annotation( ) "A bone that is part of a the pedal digitopodium skeleton - i.e. the toes or the metatarsal skeleton.") AnnotationAssertion( ) AnnotationAssertion( "bone of hindlimb digitopodium") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0012359") AnnotationAssertion(rdfs:label "pedal digitopodium bone") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (bone of jaw) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A bone element that is part of a jaw region.") AnnotationAssertion( "Do not manually classify under here - bones are automatically classified") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:35453") AnnotationAssertion( "MA:0003130") AnnotationAssertion( "jaw bone") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0012360") AnnotationAssertion(rdfs:label "bone of jaw") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (internal anal region) AnnotationAssertion( "EHDAA2:0004588") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0012361") AnnotationAssertion(rdfs:label "internal anal region") SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (thyroid follicle epithelium) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An epithelium that is part of a thyroid follicle.") AnnotationAssertion(Annotation( "As in mammals, the thyroid follicles of the zebrafish are usually round to oval, with low cuboidal epithelium. In contrast to mammals, the follicles are not concentrated together but are diffusely distributed along the ventral aorta.") Annotation( ) ) AnnotationAssertion( "thryoid epithelium") AnnotationAssertion( "FMA:68783") AnnotationAssertion(Annotation( "FMA:68783") "epithelium of thyroid follicle") AnnotationAssertion(Annotation( "FMA:68783") "thyroid follicle epithelium") AnnotationAssertion(Annotation( "FMA:68783") "wall of thyroid follicle") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0012363") AnnotationAssertion(rdfs:label "thyroid follicle epithelium") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (colloid of thyroid follicle) AnnotationAssertion(Annotation( ) "Portion of substance contained within the thyroid follicle lumen. Contains prohormone thyroglobulin.") AnnotationAssertion( "FMA:68831") AnnotationAssertion(Annotation( "FMA:68831") "thyroid colloid") AnnotationAssertion(Annotation( "FMA:68831") "thyroid follicle colloid") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0012364") AnnotationAssertion(rdfs:label "colloid of thyroid follicle") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (muscle layer of intestine) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A muscle layer that is part of an intestine.") AnnotationAssertion( "FMA:15697") AnnotationAssertion(Annotation( "FMA:15697") "intestinal muscularis propria") AnnotationAssertion(Annotation( "FMA:15697") "muscularis externa of intestine") AnnotationAssertion( "uberon") AnnotationAssertion( "smooth muscle of intestine") AnnotationAssertion( "UBERON:0012367") AnnotationAssertion(rdfs:label "muscle layer of intestine") SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (circular muscle layer of muscular coat) AnnotationAssertion(Annotation( "BTO:0005213") "The inner layer of the muscular coat.") AnnotationAssertion( "BTO:0005213") AnnotationAssertion( "FMA:62899") AnnotationAssertion( "uberon") AnnotationAssertion( "circular muscle layer") AnnotationAssertion(Annotation( "BTO:0005213") "circular smooth muscle") AnnotationAssertion(Annotation( "FMA:62899") "inner muscularis") AnnotationAssertion(Annotation( "FMA:62899") "inner muscularis layer") AnnotationAssertion( "UBERON:0012368") AnnotationAssertion(rdfs:label "circular muscle layer of muscular coat") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (longitudinal muscle layer of muscular coat) AnnotationAssertion(Annotation( "BTO:0005214") "The outer layer of the muscular coat.") AnnotationAssertion( "BTO:0005214") AnnotationAssertion( "FMA:62900") AnnotationAssertion( "uberon") AnnotationAssertion( "longitudinal muscle layer") AnnotationAssertion(Annotation( "BTO:0005214") "longitudinal smooth muscle") AnnotationAssertion(Annotation( "FMA:62900") "outer muscularis") AnnotationAssertion(Annotation( "FMA:62900") "outer muscularis layer") AnnotationAssertion( "UBERON:0012369") AnnotationAssertion(rdfs:label "longitudinal muscle layer of muscular coat") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (sympathetic nerve plexus) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A nerve plexus that is part of a sympathetic nervous system.") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37617") AnnotationAssertion( "MA:0001160") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0012373") AnnotationAssertion(rdfs:label "sympathetic nerve plexus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (subserosal plexus) AnnotationAssertion(Annotation( ) "The subserous part of the enteric plexus of autonomic nerves.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:77598") AnnotationAssertion(Annotation( "FMA:77598") "subserous nerve plexus") AnnotationAssertion(Annotation( "FMA:77598") "subserous plexus") AnnotationAssertion( "tela subserosa") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0012374") AnnotationAssertion(rdfs:label "subserosal plexus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (subserosa) AnnotationAssertion(Annotation( ) "A layer of tissue between the muscularis and serosa.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:45636") AnnotationAssertion( "NCIT:C94494") AnnotationAssertion(Annotation( "ncithesaurus:Subserosa") "UMLS:C0225334") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0012375") AnnotationAssertion(rdfs:comment "Contains nerves, blood vessels, lymphatics and lymph nodes") AnnotationAssertion(rdfs:label "subserosa") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (retromolar triangle) AnnotationAssertion(Annotation( ) Annotation( "ncithesaurus:Retromolar_Trigone") "The small area behind the wisdom teeth.") AnnotationAssertion( "requires verification") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "CALOHA:TS-2353") AnnotationAssertion( "FMA:75784") AnnotationAssertion( "NCIT:C54223") AnnotationAssertion(Annotation( "ncithesaurus:Retromolar_Trigone") "UMLS:C0226920") AnnotationAssertion( "uberon") AnnotationAssertion( "retromolar pad") AnnotationAssertion( "retromolar trigone") AnnotationAssertion( "UBERON:0012376") AnnotationAssertion(rdfs:label "retromolar triangle") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (muscle layer of jejunum) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A muscular coat that is part of a jejunum.") AnnotationAssertion( "FMA:14951") AnnotationAssertion(Annotation( "FMA:14951") "muscularis externa of jejunum") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "jejunal smooth muscle") AnnotationAssertion(Annotation( ) "muscularis propria of jejunum") AnnotationAssertion(Annotation( ) "smooth muscle of jejunum") AnnotationAssertion( "UBERON:0012377") AnnotationAssertion(rdfs:label "muscle layer of jejunum") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (muscle layer of urinary bladder) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A muscular coat that is part of a urinary bladder.") AnnotationAssertion( ) AnnotationAssertion( "FMA:15930") AnnotationAssertion( "NCIT:C32206") AnnotationAssertion(Annotation( "ncithesaurus:Bladder_Muscular_Coat") "UMLS:C1288327") AnnotationAssertion( "bladder muscular coat") AnnotationAssertion(Annotation( "FMA:15930") "muscle layer of urinary bladder") AnnotationAssertion(Annotation( "FMA:15930") "muscular coat of bladder") AnnotationAssertion(Annotation( "FMA:15930") "muscular coat of urinary bladder") AnnotationAssertion(Annotation( "FMA:15930") "muscular layer of bladder") AnnotationAssertion(Annotation( "FMA:15930") "muscular layer of urinary bladder") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) "tunica musculari vesicae") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) "tunica muscularis (vesica urinaria)") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0012378") AnnotationAssertion(rdfs:label "muscle layer of urinary bladder") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (large intestine smooth muscle circular layer) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A circular muscle layer of muscular coat that is part of a large intestine smooth muscle.") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37558") AnnotationAssertion( "FMA:81160") AnnotationAssertion( "MA:0001548") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:81160") "circular muscle layer of segment of large intestine") AnnotationAssertion( "UBERON:0012398") AnnotationAssertion(rdfs:label "large intestine smooth muscle circular layer") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (large intestine smooth muscle longitudinal layer) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A longitudinal muscle layer of muscular coat that is part of a large intestine smooth muscle.") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37559") AnnotationAssertion( "FMA:63637") AnnotationAssertion( "MA:0001549") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:63637") "longitudinal muscle layer of zone of large intestine") AnnotationAssertion( "UBERON:0012399") AnnotationAssertion(rdfs:label "large intestine smooth muscle longitudinal layer") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (small intestine smooth muscle circular layer) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A circular muscle layer of muscular coat that is part of a small intestine smooth muscle.") AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37562") AnnotationAssertion( "FMA:14935") AnnotationAssertion( "MA:0001560") AnnotationAssertion(Annotation( "FMA:14935") "circular layer of small intestine muscularis propria") AnnotationAssertion(Annotation( "FMA:14935") "circular muscle coat of small intestine") AnnotationAssertion(Annotation( "FMA:14935") "circular muscle layer of small intestine") AnnotationAssertion(Annotation( "FMA:14935") "circular muscle of small intestine") AnnotationAssertion(Annotation( "FMA:14935") "short pitch helicoidal muscle layer of small intestine") AnnotationAssertion(Annotation( "FMA:14935") "stratum circulare (tunica muscularis)(intestinum tenue)") AnnotationAssertion(Annotation( "FMA:14935") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "stratum circulare tunicae muscularis intestini tenuis") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) "stratum helicoidale brevis gradus tunicae muscularis intestini tenuis") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0012401") AnnotationAssertion(rdfs:label "small intestine smooth muscle circular layer") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (small intestine smooth muscle longitudinal layer) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A longitudinal muscle layer of muscular coat that is part of a small intestine smooth muscle.") AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37563") AnnotationAssertion( "FMA:14936") AnnotationAssertion( "MA:0001561") AnnotationAssertion(Annotation( "FMA:14936") "long pitch helicoidal muscle layer of small intestine") AnnotationAssertion(Annotation( "FMA:14936") "longitudinal layer of small intestine muscularis propria") AnnotationAssertion(Annotation( "FMA:14936") "longitudinal muscle coat of small intestine") AnnotationAssertion(Annotation( "FMA:14936") "longitudinal muscle layer of small intestine") AnnotationAssertion(Annotation( "FMA:14936") "longitudinal muscle of small intestine") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) "stratum helicoidale longi gradus tunicae muscularis intestini tenuis") AnnotationAssertion(Annotation( "FMA:14936") "stratum longitudinale (tunica muscularis) (intestinum tenue)") AnnotationAssertion(Annotation( "FMA:14936") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "stratum longitudinale tunicae muscularis intestini tenuis") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0012402") AnnotationAssertion(rdfs:label "small intestine smooth muscle longitudinal layer") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (respiratory system arterial smooth muscle) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37567") AnnotationAssertion( "MA:0001802") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0012416") AnnotationAssertion(rdfs:label "respiratory system arterial smooth muscle") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (respiratory system venous smooth muscle) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A smooth muscle tissue that is part of a respiratory system venous blood vessel.") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37586") AnnotationAssertion( "MA:0001812") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0012418") AnnotationAssertion(rdfs:label "respiratory system venous smooth muscle") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (taenia coli) AnnotationAssertion(Annotation( ) "The taeniae coli (also teniae coli) are three separate longitudinal ribbons of smooth muscle on the outside of the ascending, transverse, descending and sigmoid colons. They are visible, and can be seen just below the serosa or fibrosa. They are the Mesocolic, Free and Omental Coli. The teniae coli contracts length wise to produce the haustra, the bulges in the colon. The bands converge at the root of the vermiform appendix and the rectum. These bands correspond to the outer layer of the muscularis externa, in other portions of the digestive tract.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:15041") AnnotationAssertion(Annotation( "FMA:15041") "longitudinal band of large intestine muscularis") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "longitudinal bands") AnnotationAssertion(Annotation( ) "taeniae coli") AnnotationAssertion(Annotation( ) "tenia coli") AnnotationAssertion(Annotation( ) "teniae coli") AnnotationAssertion( "UBERON:0012419") AnnotationAssertion(rdfs:label "taenia coli") SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (coprodeum) AnnotationAssertion(Annotation( "ISBN:0073040584"^^xsd:string) "Most proximal cloacal compartment, into which the large intestine empties[Kardong].") AnnotationAssertion( "coprodeal") AnnotationAssertion( "cloacal coprodeum") AnnotationAssertion( "coprodaeum") AnnotationAssertion( "coprodeal portion of cloaca") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0012420") AnnotationAssertion(rdfs:label "coprodeum") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (layer of microvilli) AnnotationAssertion(Annotation( ) Annotation( "GO:0005902") "A layer of microvilli, Thin cylindrical membrane-covered projections on the surface of an animal cell containing a core bundle of actin filaments[GO,modified].") AnnotationAssertion( "a wide variety of physiological and cellular functions including absorption, secretion, cellular adhesion, and mechanotransduction") AnnotationAssertion( "increases the surface area of a cell lining whilst minimizing increase in volume") AnnotationAssertion(Annotation( "FMA"^^xsd:string) "FMA class represents an individual microvillus.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:67296") AnnotationAssertion( "MESH:D008871") AnnotationAssertion( "NCIT:C33112") AnnotationAssertion(Annotation( "ncithesaurus:Microvillus") "UMLS:C0026049") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "MESH:A11.284.180.565") "microvilli") AnnotationAssertion(Annotation( "FMA:67296") "microvillus") AnnotationAssertion( "UBERON:0012423") AnnotationAssertion(rdfs:label "layer of microvilli") SubClassOf( ) # Class: (brush border layer) AnnotationAssertion(Annotation( ) "The microvilli-covered surface of simple cuboidal epithelium and simple columnar epithelium cells found in certain locations of the body; mainly in the small an large intestines and kidneys.") AnnotationAssertion(Annotation( "FMA"^^xsd:string) "FMA class represents an individual microvillus") AnnotationAssertion( ) AnnotationAssertion( "FMA:70977") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:70977") "brush border") AnnotationAssertion(Annotation( ) "brush border membrane") AnnotationAssertion( "UBERON:0012424") AnnotationAssertion(rdfs:comment "Note - this anatomical structure differs from the cellular component GO_0005903 brush border (defined as: the dense covering of microvilli on the apical surface of a epithelial cells in tissues such as the intestine, kidney, and choroid plexus; the microvilli aid absorption by increasing the surface area of the cell).") AnnotationAssertion(rdfs:label "brush border layer") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (striated border microvillus layer) AnnotationAssertion(Annotation( ) Annotation( ) "A microvillus layer that is striated and found in the intestine.") AnnotationAssertion(Annotation( "FMA"^^xsd:string) "FMA class represents an individual microvillus") AnnotationAssertion( "FMA:70978") AnnotationAssertion( "NCIT:C33634") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:70978") "striated border") AnnotationAssertion( "UBERON:0012425") AnnotationAssertion(rdfs:label "striated border microvillus layer") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (short microvillus layer) AnnotationAssertion(Annotation( ) "A layer of microvilli covering lymphocytes.") AnnotationAssertion( "consider ceding to GO") AnnotationAssertion(Annotation( "FMA"^^xsd:string) "FMA class represents an individual microvillus") AnnotationAssertion( "FMA:70979") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:70979") "short microvillus") AnnotationAssertion( "UBERON:0012426") AnnotationAssertion(rdfs:label "short microvillus layer") SubClassOf( ) # Class: (intestinal brush border layer) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A brush border layer that is part of a intestine.") AnnotationAssertion( "brush border microvillus layer of intestine") AnnotationAssertion( "intestinal brush border") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0012427") AnnotationAssertion(rdfs:comment "Consider merging into UBERON:0012425") AnnotationAssertion(rdfs:label "intestinal brush border layer") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (proximal convoluted tubule brush border) AnnotationAssertion(Annotation( ) Annotation( ) "A brush border layer that is part of a proximal tubule in the kidney.") AnnotationAssertion( "the microvilli in this layer can act as mechanosensors. They sense the fluid flow in the tubule lumen and convert this information via biochemical responses into reabsorption") AnnotationAssertion( "kidney brush border layer") AnnotationAssertion( "proximal tubule brush border layer") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0012428") AnnotationAssertion(rdfs:label "proximal convoluted tubule brush border") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (hematopoietic tissue) AnnotationAssertion(Annotation( ) "Blood-forming tissue, consisting of reticular fibers and cells.") AnnotationAssertion( "Bone marrow in humans, kidney interstitium in Danio, within a stroma of reticuloendothelial tissue") AnnotationAssertion( ) AnnotationAssertion( "CALOHA:TS-2142") AnnotationAssertion( "FMA:14073") AnnotationAssertion( "NCIT:C13051") AnnotationAssertion(Annotation( "ncithesaurus:Hematopoietic_Tissue") "UMLS:C0229619") AnnotationAssertion(Annotation( "FMA:14073") "haemopoietic tissue") AnnotationAssertion(Annotation( "FMA:14073") "hematopoietic tissue") AnnotationAssertion(Annotation( "FMA:14073") "hemopoietic tissue") AnnotationAssertion(Annotation( "FMA:14073") "textus haemopoieticus") AnnotationAssertion(Annotation( "NCBITaxon:9606"^^xsd:string) "bone marrow tissue") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0012429") AnnotationAssertion(rdfs:label "hematopoietic tissue") SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf(Annotation( "defitional") ObjectSomeValuesFrom( )) # Class: (tunica fibrosa of eyeball) AnnotationAssertion(Annotation( ) "The sclera and cornea form the fibrous tunic of the bulb of the eye; the sclera is opaque, and constitutes the posterior five-sixths of the tunic; the cornea is transparent, and forms the anterior sixth.") AnnotationAssertion(Annotation( ) ) AnnotationAssertion( "tunica fibrosa") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:58102") AnnotationAssertion(Annotation( "FMA:58102") "fibrous layer of eyeball") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "corneosclera") AnnotationAssertion(Annotation( ) "fibrous tunic") AnnotationAssertion( "UBERON:0012430") AnnotationAssertion(rdfs:label "tunica fibrosa of eyeball") SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (epithelial-mesenchymal boundary) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An anatomical line that adjacent_to a epithelium and adjacent_to a mesenchyme.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0012437") AnnotationAssertion(rdfs:label "epithelial-mesenchymal boundary") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (blastema of regenerating fin/limb) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A blastema that is part of a regenerating fin/limb.") AnnotationAssertion( "ZFA:0001270") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0012438") AnnotationAssertion(rdfs:label "blastema of regenerating fin/limb") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (blastema of regenerating digit tip) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A blastema that is part of a distal segment of digit.") AnnotationAssertion( "uberon") AnnotationAssertion( "digit blastema") AnnotationAssertion( "UBERON:0012439") AnnotationAssertion(rdfs:label "blastema of regenerating digit tip") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (endothelium of peritubular capillary) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An endothelium that is part of a peritubular capillary.") AnnotationAssertion( "peritubular endothelium") AnnotationAssertion( "peritubular capillary endothelium") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0012441") AnnotationAssertion(rdfs:label "endothelium of peritubular capillary") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (epiploic foramen) AnnotationAssertion(Annotation( ) "The passage of communication, or foramen, between the general cavity (of the abdomen), and the omental bursa.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0000447") AnnotationAssertion( "FMA:14711") AnnotationAssertion(Annotation( "FMA:14711") "aditus to lesser sac") AnnotationAssertion(Annotation( ) "epiploic foramen of Winslow") AnnotationAssertion(Annotation( "FMA:14711") "foramen of Winslow") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) "foramen omentale") AnnotationAssertion(Annotation( "FMA:14711") "foramen omentale (epiploicum)") AnnotationAssertion(Annotation( "FMA:14711") "omental foramen") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "epiploic foramen") AnnotationAssertion(Annotation( ) "foramen epiploicum") AnnotationAssertion(Annotation( ) "foramen of winslow") AnnotationAssertion( "UBERON:0012442") AnnotationAssertion(rdfs:label "epiploic foramen") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete cloacal spur) AnnotationAssertion(Annotation( ) "Retained pelvic vestiges found in birds. They are generally used in courtship and are more pronounced in males than females.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0012446") AnnotationAssertion(rdfs:comment "Obsoleted as lacks support in literature") AnnotationAssertion(rdfs:label "obsolete cloacal spur") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (mechanoreceptor) AnnotationAssertion(Annotation( ) "A sensory receptor that responds to mechanical pressure or distortion.") AnnotationAssertion( ) AnnotationAssertion( "FMA:86587") AnnotationAssertion( "MESH:A08.800.550.700.500") AnnotationAssertion( "NCIT:C13821") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0012449") AnnotationAssertion(rdfs:comment "Normally there are four main types in glabrous skin: Pacinian corpuscles, Meissner's corpuscles, Merkel's discs, and Ruffini endings. There are also mechanoreceptors in hairy skin, and the hair cells in the cochlea are the most sensitive mechanoreceptors, transducing air pressure waves into nerve signals sent to the brain. In the periodontal ligament, there are some mechanoreceptors, which allow the jaw to relax when biting down on hard objects; the mesencephalic nucleus is responsible for this reflex") AnnotationAssertion(rdfs:label "mechanoreceptor") SubClassOf( ) # Class: (Meissner's corpuscle) AnnotationAssertion(Annotation( ) "A type of nerve ending in the skin that is responsible for sensitivity to light touch. In particular, they have highest sensitivity (lowest threshold) when sensing vibrations lower than 50 Hertz. They are rapidly adaptive receptors.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:83605") AnnotationAssertion( "NCIT:C13171") AnnotationAssertion(Annotation( "ncithesaurus:Meissner_Corpuscle") "UMLS:C0205831") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "ISBN:9780849388118") "Dogiel's end bulb") AnnotationAssertion(Annotation( "ISBN:9780849388118") "Ruffini's end bulb") AnnotationAssertion(Annotation( ) "meisner's corpuscle") AnnotationAssertion(Annotation( ) "meissner corpuscle") AnnotationAssertion(Annotation( ) "meissner corpuscle end-organ") AnnotationAssertion(Annotation( ) "meissner's corpuscle") AnnotationAssertion(Annotation( ) "meissner's corpuscles") AnnotationAssertion(Annotation( ) "messier corpuscle") AnnotationAssertion(Annotation( ) "messner's corpuscle") AnnotationAssertion(Annotation( ) "tactile corpuscles of Wagner and Meissner") AnnotationAssertion( "UBERON:0012450") AnnotationAssertion(rdfs:comment "located in papillary layer of dermis in glabrous skin[ISBN:9780849388118]") AnnotationAssertion(rdfs:label "Meissner's corpuscle") SubClassOf(Annotation( "Wikipedia"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (sensory receptor) AnnotationAssertion(Annotation( ) "A sensory nerve ending that responds to a stimulus in the internal or external environment of an organism. In response to stimuli the sensory receptor initiates sensory transduction by creating graded potentials or action potentials in the same cell or in an adjacent one.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:84650") AnnotationAssertion( "MESH:A08.800.550.700") AnnotationAssertion( "NCIT:C13819") AnnotationAssertion(Annotation( "ncithesaurus:Somatosensory_Receptor") "UMLS:C0682664") AnnotationAssertion(Annotation( "FMA:84650") "peripheral ending of sensory neuron") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "MESH:A08.800.550.700") "sensory nerve ending") AnnotationAssertion( "UBERON:0012451") AnnotationAssertion(rdfs:label "sensory receptor") SubClassOf( ) # Class: (nerve ending) AnnotationAssertion(Annotation( "MESH:A08.800.550") "Specialized terminations of peripheral neurons. Nerve endings include NEUROEFFECTOR JUNCTION(s) by which neurons activate target organs and sensory receptors (see RECEPTORS, SENSORY) which transduce information from the various sensory modalities and send it centrally in the nervous system. Presynaptic nerve endings are PRESYNAPTIC TERMINALS.") AnnotationAssertion( "this class and subclasses may be ceded to GO") AnnotationAssertion( "MESH:D009411") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "MESH:A08.800.550") "nerve ending") AnnotationAssertion( "UBERON:0012453") AnnotationAssertion(rdfs:label "nerve ending") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (Merkel nerve ending) AnnotationAssertion(Annotation( ) "Mechanoreceptors found in the skin and mucosa of vertebrates that provide touch information to the brain. The information they provide are those regarding pressure and texture. Each ending consists of a Merkel cell in close apposition with an enlarged nerve terminal.") AnnotationAssertion(Annotation( "WP"^^xsd:string) "In mammals, Merkel nerve endings have a wide distribution. Merkel nerve endings are found in the basal layer of glabrous and hairy skin, in hair follicles, and in oral and anal mucosa. In humans, Merkel cells (along with Meissner's corpuscles) occur in the superficial skin layers, and are found clustered beneath the ridges of the fingertips that make up fingerprints. In hairy skin, Merkel nerve endings are clustered into specialized epithelial structures called 'touch domes' or 'hair disks'. (Some other types of mechanoreceptors, such as Pacinian corpuscles and Ruffini endings, are found primarily in subcutaneous tissue.) Merkel receptors are also located in the mammary glands. Wherever they are found, the epithelium is arranged to optimize the transfer of pressure to the ending.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:83606") AnnotationAssertion( "NIF_Subcellular:FMA_83606") AnnotationAssertion(Annotation( "FMA:83606") "Merkel's disc") AnnotationAssertion( "Merkel's disk") AnnotationAssertion( "Merkel's receptor") AnnotationAssertion( "Merkel's tactile disc") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0012456") AnnotationAssertion(rdfs:label "Merkel nerve ending") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (Ruffini nerve ending) AnnotationAssertion(Annotation( ) Annotation( "ISBN:9780849388118") "An encapsulated nerve receptor present in subpapillary dermis and deep dermis of hairy and glabrous skin.") AnnotationAssertion( "there is some debate as to its existence[ISBN:9780849388118]") AnnotationAssertion(Annotation( "MP") "MP says subcutaneous tissue of digits; NCITA says hypodermis") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:83602") AnnotationAssertion( "FMA:84004") AnnotationAssertion( "NCIT:C13175") AnnotationAssertion(Annotation( "ncithesaurus:Ruffinis_Corpuscle") "UMLS:C0035943") AnnotationAssertion(Annotation( "MP:0000989") "Ruffini's corpuscle") AnnotationAssertion(Annotation( ) Annotation( ) "corpusculum sensorium fusiforme") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "Ruffini corpuscle") AnnotationAssertion(Annotation( ) "Ruffini corpuscle end-organ") AnnotationAssertion(Annotation( ) "Ruffini corpuscles") AnnotationAssertion(Annotation( ) "Ruffini endings") AnnotationAssertion(Annotation( ) "Ruffini's corpuscles") AnnotationAssertion(Annotation( ) "Ruffini's end organ") AnnotationAssertion(Annotation( ) "Ruffini's ending") AnnotationAssertion(Annotation( ) "Ruffini's organs") AnnotationAssertion(Annotation( ) "bulbous corpuscle") AnnotationAssertion(Annotation( ) "corpuscle of ruffini") AnnotationAssertion( "UBERON:0012457") AnnotationAssertion(rdfs:label "Ruffini nerve ending") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (proctodeum portion of cloaca) AnnotationAssertion(Annotation( "ISBN:0073040584"^^xsd:string) "Most distal cloacal compartment; function is copulation and in some species develops a penis[Kardong].") AnnotationAssertion( "proctodeal") AnnotationAssertion(Annotation( ) "For most birds this is where the phallus is located, but male parrots do not have a phallus. The Bursa of Fabricius is located here.") AnnotationAssertion( ) AnnotationAssertion( "uberon") AnnotationAssertion( "proctodeal wall of cloaca") AnnotationAssertion(Annotation( ) "proctodeum") AnnotationAssertion( "UBERON:0012462") AnnotationAssertion(rdfs:label "proctodeum portion of cloaca") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (cloacal lumen) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An anatomical space that is enclosed by a cloaca.") AnnotationAssertion(Annotation( "ZFA"^^xsd:string) "the ZFA class belongs here as it is an anatomical space. See https://sourceforge.net/p/obo/zebrafish-anatomy-zfa-term-requests/102/") AnnotationAssertion( "TAO:0000330") AnnotationAssertion( "ZFA:0000330") AnnotationAssertion(Annotation( "ZFA:0000330") "cloaca lumen") AnnotationAssertion(Annotation( "ZFA:0000330") "cloacal chamber") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0012463") AnnotationAssertion(rdfs:label "cloacal lumen") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "cjm"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (cloacal vent) AnnotationAssertion(Annotation( ) "The opening of the cloacal chamber to the outside of the organism. Birds maintain a single cloacal opening throughout their lives.") AnnotationAssertion( "cloacal opening") AnnotationAssertion( "uberon") AnnotationAssertion( "cloacal orifice") AnnotationAssertion( "vent") AnnotationAssertion( "UBERON:0012464") AnnotationAssertion(rdfs:label "cloacal vent") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lumen of terminal part of digestive tract) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An anatomical space that is enclosed by a terminal part of digestive tract.") AnnotationAssertion( "includes the cloacal lumen, in species where this is present") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0012465") AnnotationAssertion(rdfs:label "lumen of terminal part of digestive tract") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (extraembryonic cavity) AnnotationAssertion( "EHDAA2:0000472") AnnotationAssertion( "EMAPA:16054") AnnotationAssertion( "VHOG:0000767") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "EHDAA2:0000472") Annotation( ) "extraembryonic cavities") AnnotationAssertion( "UBERON:0012466") AnnotationAssertion(rdfs:label "extraembryonic cavity") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (enclosed anatomical space) AnnotationAssertion(Annotation( "AEO:0000222") "An anatomical space with no opening to another space or to the exterior.") AnnotationAssertion( "AEO:0000222") AnnotationAssertion( "closed anatomical space") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0012467") AnnotationAssertion(rdfs:label "enclosed anatomical space") SubClassOf( ) # Class: (external anal region) AnnotationAssertion( "EHDAA2:0004589") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0012469") AnnotationAssertion(rdfs:label "external anal region") SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (hepatogastric ligament) AnnotationAssertion(Annotation( ) "Ligament extending between the liver and stomach.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:16520") AnnotationAssertion( "NCIT:C32737") AnnotationAssertion(Annotation( "ncithesaurus:Hepatogastric_Ligament") "UMLS:C0230232") AnnotationAssertion( "gastro-hepatic ligament") AnnotationAssertion(Annotation( "FMA:16520") "gastrohepatic ligament") AnnotationAssertion( "hepato-gastric ligament") AnnotationAssertion(Annotation( ) Annotation( ) "ligamentum hepatogastricum") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0012471") AnnotationAssertion(rdfs:label "hepatogastric ligament") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (hepatoduodenal ligament) AnnotationAssertion(Annotation( ) "The hepatoduodenal ligament is the portion of the lesser omentum extending between the porta hepatis of the liver and the superior part of the duodenum.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:16521") AnnotationAssertion(Annotation( ) "ligamentum hepatoduodenale") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0012472") AnnotationAssertion(rdfs:label "hepatoduodenal ligament") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (skeleton of pectoral complex) AnnotationAssertion(Annotation( ) "The collection of all skeletal elements in a pectoral complex - i.e. the combination of free limb or fin plus pectoral girdle.") AnnotationAssertion( "FMA:24139") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:24139") "bones of upper limb") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) "ossa membri superioris") AnnotationAssertion(Annotation( ) "pectoral complex skeleton") AnnotationAssertion(Annotation( "FMA:24139") "set of bones of upper limb") AnnotationAssertion(Annotation( ) "skeleton of anterior limb/fin and girdle") AnnotationAssertion(Annotation( "FMA:24139") "upper limb skeleton") AnnotationAssertion( "UBERON:0012475") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "skeleton of pectoral complex") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (skeleton of pelvic complex) AnnotationAssertion(Annotation( ) "The collection of all skeletal elements in a pelvic complex - i.e. the combination of free limb or fin plus pelvic girdle.") AnnotationAssertion( "FMA:24140") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:24140") "bones of lower limb") AnnotationAssertion(Annotation( "FMA:24140") "lower limb skeleton") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) "ossa membri inferioris") AnnotationAssertion(Annotation( ) "pelvic complex skeleton") AnnotationAssertion(Annotation( "FMA:24140") "set of bones of lower limb") AnnotationAssertion(Annotation( ) "skeleton of posterior limb/fin and girdle") AnnotationAssertion( "UBERON:0012476") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "skeleton of pelvic complex") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (dorsal part of neck) AnnotationAssertion(Annotation( "MP:0012723") "The posterior region of the neck, including the suboccipital region.") AnnotationAssertion( "nuchal") AnnotationAssertion(Annotation( "BTO:0000957") "nape") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0000957") AnnotationAssertion( "FMA:24189") AnnotationAssertion(Annotation( "FMA:24189") "back of neck") AnnotationAssertion( "nape of neck") AnnotationAssertion(Annotation( "FMA:24189") "neck back") AnnotationAssertion(Annotation( "FMA:24189") "nucha") AnnotationAssertion(Annotation( "FMA:24189") "nuchal region") AnnotationAssertion(Annotation( "FMA:24189") "posterior cervical region") AnnotationAssertion(Annotation( "FMA:24189") "posterior neck region") AnnotationAssertion(Annotation( "FMA:24189") "posterior part of neck") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) "regio cervicalis posterior") AnnotationAssertion( "uberon") AnnotationAssertion( "hindneck") AnnotationAssertion( "UBERON:0012477") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "dorsal part of neck") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (cloacal gland) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A gland that is part of a cloaca.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0012478") AnnotationAssertion(rdfs:label "cloacal gland") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (cloacal mucosa) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A mucosa that is part of a cloaca [Automatically generated definition].") AnnotationAssertion( "UBERON:0003349") AnnotationAssertion( "cloaca mucosa") AnnotationAssertion( "cloaca mucosa of organ") AnnotationAssertion( "cloaca mucous membrane") AnnotationAssertion( "cloaca organ mucosa") AnnotationAssertion( "cloacal mucous membrane") AnnotationAssertion( "mucosa of cloaca") AnnotationAssertion( "mucosa of organ of cloaca") AnnotationAssertion( "mucous membrane of cloaca") AnnotationAssertion( "organ mucosa of cloaca") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0012480") AnnotationAssertion(rdfs:label "cloacal mucosa") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (cloacal epithelium) AnnotationAssertion(Annotation( ) "An epithelium that is part of a cloaca.") AnnotationAssertion(Annotation( "EMAPA:27577") "cloacal epithelium (cle) (syn: cloacal endoderm) (TS17-TS20): the cloacal epithelium is derived from endoderm and lines the cloacal cavity. It is marked by Shh and Cdh1 and lines the cloacal lumen. The cloacal epithelium gives rise to the urogenital sinus epithelium, hindgut epithelium and the urethral plate epithelium.") AnnotationAssertion( "EMAPA:27577") AnnotationAssertion( "EMAPA:36070") AnnotationAssertion( "ZFA:0005783") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "EMAPA:27577") "cloacal endoderm") AnnotationAssertion( "UBERON:0012481") AnnotationAssertion(rdfs:label "cloacal epithelium") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (submucosa of cloaca) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A submucosa that is part of a cloaca [Automatically generated definition].") AnnotationAssertion( "cloaca submucosa") AnnotationAssertion( "cloacal submucosa") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0012482") AnnotationAssertion(rdfs:label "submucosa of cloaca") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (serosa of cloaca) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A serous membrane that is part of a cloaca [Automatically generated definition].") AnnotationAssertion( "cloaca serosa") AnnotationAssertion( "cloaca serous membrane") AnnotationAssertion( "cloacal serosa") AnnotationAssertion( "serous membrane of cloaca") AnnotationAssertion( "visceral peritoneum of cloaca") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0012483") AnnotationAssertion(rdfs:label "serosa of cloaca") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (cloacal villus) AnnotationAssertion(Annotation( ) "cloacal villi") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0012485") AnnotationAssertion(rdfs:label "cloacal villus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (muscle layer of cloaca) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A muscular coat that is part of a cloaca.") AnnotationAssertion( "muscularis externa of cloaca") AnnotationAssertion( "uberon") AnnotationAssertion( "smooth muscle of cloaca") AnnotationAssertion( "UBERON:0012486") AnnotationAssertion(rdfs:label "muscle layer of cloaca") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (muscle layer of duodenum) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A muscular coat that is part of a duodenum.") AnnotationAssertion( ) AnnotationAssertion( "FMA:14944") AnnotationAssertion(Annotation( "FMA:14944") "duodenal muscularis propria") AnnotationAssertion(Annotation( "FMA:14944") "muscularis externa of duodenum") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "muscularis propria of duodenum") AnnotationAssertion(Annotation( ) "smooth muscle of duodenum") AnnotationAssertion( "UBERON:0012488") AnnotationAssertion(rdfs:label "muscle layer of duodenum") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (muscle layer of colon) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A muscular coat that is part of a colon.") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:27383") AnnotationAssertion( "FMA:14986") AnnotationAssertion( "MA:0003198") AnnotationAssertion(Annotation( "FMA:14986") "colonic muscularis propria") AnnotationAssertion(Annotation( "FMA:14986") "muscular coat of colon") AnnotationAssertion(Annotation( "FMA:14986") "muscular layer of colon") AnnotationAssertion(Annotation( "FMA:14986") "muscularis externa of colon") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) "tunica muscularis coli") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "MA:0003198") "colon muscularis") AnnotationAssertion( "UBERON:0012489") AnnotationAssertion(rdfs:label "muscle layer of colon") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (muscle layer of anal canal) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A muscular coat that is part of a anal canal.") AnnotationAssertion( ) AnnotationAssertion( "FMA:15708") AnnotationAssertion( "anal canal muscularis propria") AnnotationAssertion(Annotation( "FMA:15708") "anal muscularis propria") AnnotationAssertion( "muscular coat of anal canal") AnnotationAssertion( "muscular layer of anal canal") AnnotationAssertion( "muscularis externa of anal canal") AnnotationAssertion(Annotation( "FMA:15708") "muscularis propria of anal canal") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0012490") AnnotationAssertion(rdfs:label "muscle layer of anal canal") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (muscularis mucosae of duodenum) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A muscularis mucosa that is part of a duodenum.") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:27243") AnnotationAssertion( "EMAPA:27259") AnnotationAssertion( "FMA:15059") AnnotationAssertion( "MA:0003210") AnnotationAssertion( "MA:0003211") AnnotationAssertion(Annotation( "FMA:15059") "lamina muscularis of duodenal mucous membrane") AnnotationAssertion( "lamina muscularis of duodenum") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0012494") AnnotationAssertion(rdfs:label "muscularis mucosae of duodenum") SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (muscularis mucosae of rectum) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A muscularis mucosa that is part of a rectum.") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:27093") AnnotationAssertion( "FMA:15687") AnnotationAssertion(Annotation( "FMA:15687") "lamina muscularis of rectal mucosa") AnnotationAssertion(Annotation( "FMA:15687") "lamina muscularis of rectal mucous membrane") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0012497") AnnotationAssertion(rdfs:label "muscularis mucosae of rectum") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (serosa of appendix) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A serous membrane that is part of a vermiform appendix.") AnnotationAssertion( ) AnnotationAssertion( "FMA:14997") AnnotationAssertion(Annotation( "FMA:14997") "appendiceal serosa") AnnotationAssertion(Annotation( "FMA:14997") "appendix serosa") AnnotationAssertion(Annotation( "FMA:14997") "serosa of vermiform appendix") AnnotationAssertion(Annotation( "FMA:14997") "visceral peritoneum of vermiform appendix") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0012498") AnnotationAssertion(rdfs:label "serosa of appendix") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (serosa of uterine tube) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A serous membrane that is part of a fallopian tube.") AnnotationAssertion( ) AnnotationAssertion( "FMA:18316") AnnotationAssertion(Annotation( "FMA:18316") "serosa of fallopian tube") AnnotationAssertion(Annotation( "FMA:18316") "serosa of oviduct") AnnotationAssertion(Annotation( "FMA:18316") "serous coat of uterine tube") AnnotationAssertion(Annotation( "FMA:18316") "tunica serosa (tuba uterina)") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) "tunica serosa tubae uterinae") AnnotationAssertion(Annotation( "FMA:18316") "uterine tubal serosa") AnnotationAssertion(Annotation( "FMA:18316") "uterine tube serosa") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0012499") AnnotationAssertion(rdfs:label "serosa of uterine tube") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (serosa of fundus of stomach) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A serous membrane that is part of a fundus of stomach.") AnnotationAssertion( "EMAPA:27157") AnnotationAssertion( "FMA:17073") AnnotationAssertion(Annotation( "FMA:17073") "visceral peritoneum of fundus of stomach") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0012503") AnnotationAssertion(rdfs:label "serosa of fundus of stomach") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (adventitia of esophagus) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An adventitia that is part of a esophagus.") AnnotationAssertion( ) AnnotationAssertion( "FMA:63006") AnnotationAssertion(Annotation( "FMA:63006") "adventitia of oesophagus") AnnotationAssertion(Annotation( "FMA:63006") "adventitious layer of esophagus") AnnotationAssertion(Annotation( "FMA:63006") "esophageal adventitia") AnnotationAssertion(Annotation( "FMA:63006") "esophagus adventitia") AnnotationAssertion(Annotation( "FMA:63006") "tunica adventitia (esophagus)") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) "tunica adventitia oesophageae") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0012504") AnnotationAssertion(rdfs:label "adventitia of esophagus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (umbilical smooth muscle) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A smooth muscle tissue that is part of a umbilical cord.") AnnotationAssertion( "BTO:0001847") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0012615") AnnotationAssertion(rdfs:label "umbilical smooth muscle") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (ampulla of uterine tube) AnnotationAssertion(Annotation( ) "The ampulla is the second portion of the uterine tube. It is an intermediate dilated portion, which curves over the ovary. It is the most common site of human fertilization. The word ampulla is from the Latin for flask.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0004285") AnnotationAssertion( "FMA:18305") AnnotationAssertion(Annotation( "FMA:18305") "ampulla of fallopian tube") AnnotationAssertion(Annotation( "FMA:18305") "ampulla of oviduct") AnnotationAssertion(Annotation( "FMA:18305") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "ampulla tubae uterinae") AnnotationAssertion(Annotation( "FMA:18305") "uterine tube ampulla") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "ampulla of fallopian tube") AnnotationAssertion(Annotation( ) "ampulla of the fallopian tube") AnnotationAssertion(Annotation( "BTO:0004285") "ampulla of uterine tube") AnnotationAssertion( "UBERON:0012648") AnnotationAssertion(rdfs:label "ampulla of uterine tube") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (anococcygeus muscle) AnnotationAssertion(Annotation( ) "One of a pair of thin sheets of smooth muscle inserting on the rectum, having a tendinous origin largely on sacral vertebrae.") AnnotationAssertion( "BTO:0005150") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37396") AnnotationAssertion( "MA:0001533") AnnotationAssertion(Annotation( "MA:0001533") "anococcygeus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "AcM") AnnotationAssertion( "UBERON:0012649") AnnotationAssertion(rdfs:label "anococcygeus muscle") SubClassOf(Annotation( "MA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (gastroduodenal junction) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An anatomical junction that connects a stomach and connects a duodenum.") AnnotationAssertion( ) AnnotationAssertion( "FMA:17046") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0012650") AnnotationAssertion(rdfs:label "gastroduodenal junction") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (mucosa of gastroduodenal junction) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A mucosa that is part of a gastroduodenal junction.") AnnotationAssertion( "BTO:0005415") AnnotationAssertion(Annotation( "BTO:0005415") "gastroduodenal mucosa") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0012651") AnnotationAssertion(rdfs:label "mucosa of gastroduodenal junction") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (colorectum) AnnotationAssertion(Annotation( ) "The subdivision of the digestive tract that consists of the colon and the rectum.") AnnotationAssertion( "colorectal") AnnotationAssertion( ) AnnotationAssertion( "BTO:0001613") AnnotationAssertion( "CALOHA:TS-1298") AnnotationAssertion( "NCIT:C54189") AnnotationAssertion(Annotation( "ncithesaurus:Colorectal_Region") "UMLS:C1711309") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0012652") AnnotationAssertion(rdfs:label "colorectum") SubClassOf(Annotation( "non-canonical") Annotation( "cjm"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (bronchial bud) AnnotationAssertion( "BTO:0001641") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0012925") AnnotationAssertion(rdfs:label "bronchial bud") SubClassOf(Annotation( "GO:0060441") ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (colorectal mucosa) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A mucosa that is part of a colorectum.") AnnotationAssertion( "UBERON:0019041") AnnotationAssertion( "BTO:0002435") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0013067") AnnotationAssertion(rdfs:label "colorectal mucosa") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (palatine torus) AnnotationAssertion(Annotation( ) "A bony protuberance sometimes found on the hard palate at the junction of the intermaxillary suture and the transverse palatine suture.") AnnotationAssertion( "In accordance with the N. A. 'Torus palatinus' denotes a median low ridge on the oral surface of the Palatum osseum. Crista palatina, however, refers in the N. A. to a transverse crest, which is present among domestic mammals only occasionally in the pig. See Os palatinum.[NOMINA ANATOMICA VETERINARIA (2005)]") AnnotationAssertion( "FMA:59201") AnnotationAssertion(Annotation( ) Annotation( ) "torus palatinus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:59201") "crista palatina") AnnotationAssertion( "UBERON:0013068") AnnotationAssertion(rdfs:label "palatine torus") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (popliteal area) AnnotationAssertion(Annotation( ) "A depression on the ventral side of the femur, at the knee joint, between the condyles.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:22525") AnnotationAssertion( "NCIT:C103222") AnnotationAssertion(Annotation( "FMA:22525") "popliteal fossa") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "knee pit") AnnotationAssertion( "popliteal region") AnnotationAssertion( "popliteal space") AnnotationAssertion( "UBERON:0013069") AnnotationAssertion(rdfs:label "popliteal area") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (venom-injecting tooth) AnnotationAssertion(Annotation( ) "A fang that is used to inject venom into prey, through either a tube or a groove.") AnnotationAssertion( "uberon") AnnotationAssertion( "fang") AnnotationAssertion( "grooved fang") AnnotationAssertion( "tubular fang") AnnotationAssertion( "tubular tooth") AnnotationAssertion( "UBERON:0013078") AnnotationAssertion(rdfs:label "venom-injecting tooth") SubClassOf( ) # Class: (angular/surangular bone) AnnotationAssertion(Annotation( "ISBN:0073040584"^^xsd:string) "Bone formed from the fusion of angular and surangular bones. Found in snakes.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0013113") AnnotationAssertion(rdfs:label "angular/surangular bone") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pterygoideus glandulae muscle) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0013115") AnnotationAssertion(rdfs:label "pterygoideus glandulae muscle") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (venom gland musculature) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0013116") AnnotationAssertion(rdfs:label "venom gland musculature") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (sulcus of brain) AnnotationAssertion(Annotation( ) Annotation( ) "A depression or fissure in the surface of the brain. It surrounds the gyri, creating the characteristic appearance of the brain in humans and other large mammals.") AnnotationAssertion( "sulci are considered absent from lissencephalic mammals such as mice, but they may possess fissures. For example, the Allen mouse brain Atlas includes hippocampal, rhinal and choroid fissure. For this reason we do not place a taxon constraint on this class") AnnotationAssertion( ) AnnotationAssertion(Annotation( ) "Indentation on the surface of the brain or spinal cord that forms a recognizable landmark, e.g., central sulcus, sulcus limitans (CUMBO)") AnnotationAssertion(Annotation( "HBA:9352") Annotation( ) "sulci & spaces") AnnotationAssertion(Annotation( "NLX:144078") "sulcus") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "DHBA:10610") AnnotationAssertion( "HBA:9352") AnnotationAssertion( "NCIT:C32292") AnnotationAssertion(Annotation( "DHBA:10610") Annotation( ) "cerebral sulci") AnnotationAssertion(Annotation( ) "fissure of brain") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:1208") "cerebral sulci") AnnotationAssertion(Annotation( "NeuroNames:1208") "cerebral sulcus") AnnotationAssertion( "UBERON:0013118") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "sulcus of brain") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (haemal node) AnnotationAssertion(Annotation( ) "A lymphoid organ found in various mammals and some birds.") AnnotationAssertion( ) AnnotationAssertion( "hemal node") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0013119") AnnotationAssertion(rdfs:comment "Hemal nodes are characterized by the presence of large numbers of erythrocytes. Lymph nodes (see below) and hemal nodes share some similarities of structure, but really are fundamentally different organs both qualitatively and quantitatively. Both lymph and hemal nodes contain diffuse lymphatic tissue, and in most cases have nodular tissue in the form of germinal centers, as well. Like the lymph node, the hemal node has a cortex and a medulla, and germinal centers are frequently seen. There's a distinct capsule, and hemal nodes are served at the hilus by an afferent arteriole. [http://www.vetmed.vt.edu/education/curriculum/vm8054/labs/lab13/lab13.htm]") AnnotationAssertion(rdfs:label "haemal node") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (eyelid submuscular connective tissue) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37534") AnnotationAssertion( "MA:0001253") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0013120") AnnotationAssertion(rdfs:label "eyelid submuscular connective tissue") SubClassOf(Annotation( "MA"^^xsd:string) ) # Class: (proximal epiphysis of phalanx of pes) AnnotationAssertion( "FMA:32888") AnnotationAssertion(Annotation( "FMA:32888") "basal epiphysis of phalanx of foot") AnnotationAssertion(Annotation( "FMA:32888") "base of phalanx of foot") AnnotationAssertion(Annotation( "FMA:32888") "basis phalangis (pedis)") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) "basis phalangis pedis") AnnotationAssertion(Annotation( "FMA:32888") "proximal epiphysis of phalanx of toe") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0013121") AnnotationAssertion(rdfs:label "proximal epiphysis of phalanx of pes") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (distal epiphysis of phalanx of pes) AnnotationAssertion( ) AnnotationAssertion( "FMA:32890") AnnotationAssertion(Annotation( "FMA:32890") "caput phalangis (pedis)") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) "caput phalangis pedis") AnnotationAssertion(Annotation( "FMA:32890") "distal end of phalanx of foot") AnnotationAssertion(Annotation( "FMA:32890") "distal epiphysis of phalanx of toe") AnnotationAssertion(Annotation( "FMA:32890") "head of phalanx of foot") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:32890") "ungual tuberosity of distal phalanx of toe") AnnotationAssertion( "UBERON:0013122") AnnotationAssertion(rdfs:label "distal epiphysis of phalanx of pes") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (left posterior cardinal vein) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A posterior cardinal vein that is in_the_left_side_of a multicellular organism.") AnnotationAssertion( "https://github.com/obophenotype/uberon/wiki/Modeling-paired-structures-Design-Pattern"^^xsd:anyURI) AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0001486") AnnotationAssertion( "FMA:70316") AnnotationAssertion(Annotation( "FMA:70316") "left postcardinal vein") AnnotationAssertion(Annotation( "EHDAA2:0001486") "posterior cardinal vein left") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0013124") AnnotationAssertion(rdfs:label "left posterior cardinal vein") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (left subcardinal vein) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A subcardinal vein that is in_the_left_side_of a multicellular organism.") AnnotationAssertion( "https://github.com/obophenotype/uberon/wiki/Modeling-paired-structures-Design-Pattern"^^xsd:anyURI) AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0001932") AnnotationAssertion(Annotation( "EHDAA2:0001932") "subcardinal vein left") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0013125") AnnotationAssertion(rdfs:label "left subcardinal vein") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (vein of abdomen) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A vein that is part of a abdomen.") AnnotationAssertion( "TODO mirror representation of abdominal aorta") AnnotationAssertion( "this class groups all veins that are in the abdomen. The term 'abdominal vein' may have specific meanings in different contexts. The lateral abdominal veins are present in fishes but usually merged or absent in tetrapods; in amphibians, the L&R abdominal veins merge into the ventral abdominal vein") AnnotationAssertion( ) AnnotationAssertion( "abdominal vein") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0013126") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "vein of abdomen") SubClassOf( ) SubClassOf( ) # Class: (pulmonary venous system) AnnotationAssertion(Annotation( ) Annotation( "ISBN:0073040584"^^xsd:string) "The part of the venous system that drains the lungs[Kardong].") AnnotationAssertion(Annotation( ) "Pulmonary circulation is the half portion of the cardiovascular system which carries oxygen-depleted blood away from the heart, to the lungs, and returns oxygenated (oxygen-rich) blood back to the heart. The term pulmonary circulation is readily paired and contrasted with the systemic circulation. A separate system known as the bronchial circulation supplies blood to the tissue of the larger airways of the lung.") AnnotationAssertion( ) AnnotationAssertion( "pulmonary venous circulatory system") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0013127") AnnotationAssertion(rdfs:label "pulmonary venous system") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (bulb of penis) AnnotationAssertion(Annotation( ) "Just before each crus of the penis meets its fellow it presents a slight enlargement, named by Kobelt the bulb of the corpus spongiosum penis. It is homologous to the vestibular bulbs in females.") AnnotationAssertion( ) AnnotationAssertion( "FMA:19614") AnnotationAssertion(Annotation( ) Annotation( ) "bulbus penis") AnnotationAssertion(Annotation( "FMA:19614") "penile bulb") AnnotationAssertion(Annotation( "FMA:19614") "urethral bulb") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "bulb of the corpus cavernosum penis") AnnotationAssertion(Annotation( ) "bulb of the corpus spongiousum penis") AnnotationAssertion(Annotation( ) "bulb of the penis") AnnotationAssertion(Annotation( ) "bulb of the urethra") AnnotationAssertion(Annotation( ) "urethral bulb") AnnotationAssertion( "UBERON:0013128") AnnotationAssertion(rdfs:label "bulb of penis") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (bulb of vestibule) AnnotationAssertion(Annotation( ) "Aggregations of erectile tissue that are an internal part of the clitoris. They can also be found throughout the vestibule: next to the clitoral body, clitoral crura, urethra, urethral sponge, and vagina.") AnnotationAssertion(Annotation( "FMA") Annotation( "FMA:20199") "Cavernous organ, located in labium minus . Examples: There iare only two bulbs of vestibule, the right and the left.[FMA]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:20199") AnnotationAssertion(Annotation( ) Annotation( ) "bulbus vestibuli vaginae") AnnotationAssertion(Annotation( "FMA:20199") "vestibular bulb") AnnotationAssertion( "vestibular bulb of vagina") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "bulbus vestibuli") AnnotationAssertion(Annotation( ) "clitoral bulb") AnnotationAssertion( "UBERON:0013129") AnnotationAssertion(rdfs:label "bulb of vestibule") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (penicillar arteriole) AnnotationAssertion(Annotation( ) Annotation( ) "One of the small straight arteries of the red pulp of the spleen; a branch of the spleen central artery that supplies the red pulp[WP,modified].") AnnotationAssertion( "FMA:16038") AnnotationAssertion(Annotation( ) Annotation( ) "penicilli") AnnotationAssertion(Annotation( "FMA:16038") "penicillus") AnnotationAssertion( "uberon") AnnotationAssertion( "penicillar artery") AnnotationAssertion( "UBERON:0013132") AnnotationAssertion(rdfs:label "penicillar arteriole") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (superior phrenic artery) AnnotationAssertion(Annotation( ) Annotation( ) "A phrenic artery that arises from the lower part of the thoracic aorta and is distributed to the posterior part of the upper surface of the diaphragm, and anastomoses with the musculophrenic and pericardiacophrenic arteries.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:4163") AnnotationAssertion(Annotation( "FMA:4163") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "arteria phrenicea superioris") AnnotationAssertion(Annotation( ) Annotation( ) "arteriae phrenicae superiores") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "superior phrenic branches") AnnotationAssertion( "UBERON:0013133") AnnotationAssertion(rdfs:label "superior phrenic artery") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "Wikipedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (interdental plate) AnnotationAssertion(Annotation( ) "The interdental plate refers to the bone-filled mesial-distal region between the teeth.") AnnotationAssertion(Annotation( "WP"^^xsd:string) "In paleobiology, the presence or absence of the interdental plate can determine the place of an animal in the evolutionary scale, and paleontologists use the interdental plate when trying to classify a new specimen. Thecodont reptiles and theropod dinosaur fossils have an interdental plate, whereas acrodont reptiles such as Sphenodontia do not.[3] Its presence in Archaeopteryx, an extinct avian, resulted in the proposal of the dinosaur-bird connection") AnnotationAssertion( ) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0013135") AnnotationAssertion(rdfs:label "interdental plate") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (vein of lip) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A vein that drains a lip.") AnnotationAssertion( ) AnnotationAssertion( "labial vein of face") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "lip vein") AnnotationAssertion(Annotation( ) "vena labialis") AnnotationAssertion( "uberon") AnnotationAssertion( "labial vein") AnnotationAssertion( "UBERON:0013136") AnnotationAssertion(rdfs:label "vein of lip") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (external pudendal artery) AnnotationAssertion(Annotation( ) "Either the superficial or deep external pudendal arteries.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0013137") AnnotationAssertion(rdfs:label "external pudendal artery") SubClassOf( ) # Class: (coronary ligament of liver) AnnotationAssertion(Annotation( ) "The coronary ligament of the liver refers to parts of the peritoneal reflections that hold the liver to the inferior surface of the diaphragm.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:15822") AnnotationAssertion( "NCIT:C32377") AnnotationAssertion(Annotation( "ncithesaurus:Coronary_Ligament") "UMLS:C1261099") AnnotationAssertion(Annotation( "FMA:15822") "coronary ligament") AnnotationAssertion(Annotation( "FMA:15822") "ligamentum coronarium") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) Annotation( ) "ligamentum coronarium hepatis") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "ligamentum coronaria") AnnotationAssertion( "UBERON:0013138") AnnotationAssertion(rdfs:label "coronary ligament of liver") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA-modified") ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (ligament of liver) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A nonskeletal ligament that is part of a liver.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:15820") AnnotationAssertion( "NCIT:C32997") AnnotationAssertion(Annotation( "ncithesaurus:Liver_Ligament") "UMLS:C0230238") AnnotationAssertion(Annotation( "FMA:15820") "hepatic ligament") AnnotationAssertion( "liver ligament") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0013139") AnnotationAssertion(rdfs:label "ligament of liver") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (systemic vein) AnnotationAssertion(Annotation( "ncithesaurus:Systemic_Vein") "Any vein within the general circulation that transports blood back to the right atrium of the heart.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:66644") AnnotationAssertion( "NCIT:C33719") AnnotationAssertion(Annotation( "ncithesaurus:Systemic_Vein") "UMLS:C0447117") AnnotationAssertion(Annotation( "FMA:66644") "systemic venous tree organ part") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0013140") AnnotationAssertion(rdfs:label "systemic vein") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (capillary bed) AnnotationAssertion(Annotation( "AEO:0001002") "A localized group of blood capillaries.") AnnotationAssertion( ) AnnotationAssertion( "AEO:0001002") AnnotationAssertion( "EMAPA:36291") AnnotationAssertion( "FMA:45632") AnnotationAssertion( "NCIT:C33109") AnnotationAssertion( "uberon") AnnotationAssertion( "microcirculatory bed") AnnotationAssertion( "UBERON:0013141") AnnotationAssertion(rdfs:label "capillary bed") SubClassOf( ) SubClassOf(Annotation( "AEO"^^xsd:string) ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (soleal vein) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A vein that drains the soleus.") AnnotationAssertion( ) AnnotationAssertion( "soleus vein") AnnotationAssertion( "vein of soleus muscle") AnnotationAssertion(Annotation( ) "vena solealis") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0013142") AnnotationAssertion(rdfs:label "soleal vein") SubClassOf(Annotation( "cjm"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (gastrocnemius vein) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A vein that drains the gastrocnemius.") AnnotationAssertion( ) AnnotationAssertion( "vein of gastrocnemius muscle") AnnotationAssertion(Annotation( ) "vena gastrocnemii") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0013143") AnnotationAssertion(rdfs:comment "divided in medial gastrocnemius vein (vena medialis gastrocnemii), lateral gastrocnemius vein (vena lateralis gastrocnemii), and intergemellar vein (Vena intergemellaris), the vein ascending between the two heads of the gastrocnemius[http://www.veinsurg.com/fr/biblio/echodoppler/echodoppler_11.php]") AnnotationAssertion(rdfs:label "gastrocnemius vein") SubClassOf(Annotation( "cjm"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (vein of genicular venous plexus) AnnotationAssertion( "FMA:44559") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:44559") "genicular vein") AnnotationAssertion( "UBERON:0013144") AnnotationAssertion(rdfs:comment "The term genicular venous plexus (plexus venosus genicularis) should replace the term genicular veins. At the knee, deep veins do not correspond exactly to the branches of the popliteal artery (articular arteries). They are arranged in a complex plexus of interconnecting veins.[http://www.veinsurg.com/fr/biblio/echodoppler/echodoppler_11.php]") AnnotationAssertion(rdfs:label "vein of genicular venous plexus") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (accessory saphenous vein) AnnotationAssertion( ) AnnotationAssertion( "FMA:44320") AnnotationAssertion(Annotation( "FMA:44320") "posteromedial vein of thigh") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0013145") AnnotationAssertion(rdfs:label "accessory saphenous vein") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (venous system of brain) AnnotationAssertion( "EHDAA2:0000185") AnnotationAssertion( "EMAPA:18631") AnnotationAssertion( "MA:0003184") AnnotationAssertion( "VHOG:0001328") AnnotationAssertion(Annotation( "VHOG:0001328") "brain venous system") AnnotationAssertion( "uberon") AnnotationAssertion( "cranial venous system") AnnotationAssertion( "UBERON:0013146") AnnotationAssertion(rdfs:label "venous system of brain") SubClassOf( ) SubClassOf(Annotation( "cjm"^^xsd:string) ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "VHOG-modified") ObjectSomeValuesFrom( )) # Class: (early mesencephalic vesicle) AnnotationAssertion( "EHDAA2:0001102") AnnotationAssertion(Annotation( "EHDAA2:0001102") "mesencephalic vesicle") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0013147") AnnotationAssertion(rdfs:comment "gives rise to midbrain vesicle which gives rise to cerebral aqueduct") AnnotationAssertion(rdfs:label "early mesencephalic vesicle") SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (early midbrain vesicle) AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0001103") AnnotationAssertion(Annotation( "EHDAA2:0001103") "midbrain vesicle") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0013148") AnnotationAssertion(rdfs:comment "develops into cerebral aqueduct") AnnotationAssertion(rdfs:label "early midbrain vesicle") SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (hindbrain vesicle) AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0000101") AnnotationAssertion( "EMAPA:16917") AnnotationAssertion(Annotation( "EHDAA2:0000101") "rhombencephalic vesicle") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0013149") AnnotationAssertion(rdfs:comment "gives rise of 4th ventricle") AnnotationAssertion(rdfs:label "hindbrain vesicle") SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (future brain vesicle) AnnotationAssertion( "consider adding all secondary vesicles (e.g. diencephalic; my/metencephalic. See http://www.dartmouth.edu/~rswenson/NeuroSci/chapter_4.html).") AnnotationAssertion( "Note that some sources may treat the term vesicle as the progenitor of the whole brain region; for example 'The retina develops directly from the neural tube as an outpouching from the diencephalic vesicle'") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "NCIT:C34259") AnnotationAssertion( "early brain vesicle") AnnotationAssertion( "primitive brain vesicle") AnnotationAssertion( "primary brain vesicle") AnnotationAssertion( "secondary brain vesicle") AnnotationAssertion( "uberon") AnnotationAssertion( "brain vesicle") AnnotationAssertion( "UBERON:0013150") AnnotationAssertion(rdfs:label "future brain vesicle") SubClassOf(Annotation( "EHDAA2"^^xsd:string) ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (choroidal artery) AnnotationAssertion(Annotation( "ncithesaurus:Choroidal_Artery") "One of two arteries (anterior and posterior choroidal artery) that supply blood to the choroid plexus, optic tract, hippocampus, globus pallidus, and other various brain regions.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "NCIT:C32310") AnnotationAssertion(Annotation( "ncithesaurus:Choroidal_Artery") "UMLS:C0226164") AnnotationAssertion( "artery of choroid plexus") AnnotationAssertion( "choroid artery") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0013151") AnnotationAssertion(rdfs:label "choroidal artery") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (interventricular foramen of heart) AnnotationAssertion(Annotation( ) "A temporary opening between the developing ventricles of the heart. The ventricles arise as a single cavity is divided by the developing interventricular septum. Before the septum closes completely, the remaining opening between the two ventricles is termed the interventricular foramen.") AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0004064") AnnotationAssertion( "uberon") AnnotationAssertion( "interventricular foramen") AnnotationAssertion(Annotation( "EHDAA2:0004064") "primary interventricular foramen") AnnotationAssertion( "UBERON:0013152") AnnotationAssertion(rdfs:comment "Phenotype notes: In some individuals, the foramen fails to close, leading to an interventricular septal defect known as a patent interventricular foramen") AnnotationAssertion(rdfs:label "interventricular foramen of heart") SubClassOf(Annotation( "EHDAA2"^^xsd:string) ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (arachnoid villus) AnnotationAssertion(Annotation( ) Annotation( "ISBN:0471888893"^^xsd:string) "Small protrusions of the arachnoid mater into vascular sinuses, acting as one-way pressure-sensitive valves.") AnnotationAssertion(Annotation( ) "Arachnoid granulations (or arachnoid villi) are small protrusions of the arachnoid (the thin second layer covering the brain) through the dura mater (the thick outer layer). They protrude into the venous sinuses of the brain, and allow cerebrospinal fluid (CSF) to exit the brain, and enter the blood stream. Largest granulations lie along the superior sagittal sinus, a large venous space running from front to back along the centre of the head (on the inside of the skull). They are, however, present along other dural sinuses as well. Smaller granulations are called villi, large calcified ones are referred to as pacchionian bodies[Wikipedia:Arachnoid_granulation].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:83980") AnnotationAssertion( "NCIT:C32137") AnnotationAssertion(Annotation( "ncithesaurus:Arachnoid_Villus") "UMLS:C0228130") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "arachnoid granulations") AnnotationAssertion(Annotation( ) Annotation( ) "arachnoid villi") AnnotationAssertion(Annotation( ) "arachnoid villus") AnnotationAssertion(Annotation( ) "arachnoidal granulations") AnnotationAssertion(Annotation( ) "glandulae pacchioni") AnnotationAssertion(Annotation( ) "glandulæ pacchioni") AnnotationAssertion(Annotation( ) "granulationes arachnoideales") AnnotationAssertion(Annotation( ) "pacchioni's granulations") AnnotationAssertion(Annotation( ) "pacchionian bodies") AnnotationAssertion(Annotation( ) "pacchionian glands") AnnotationAssertion(Annotation( ) "paccini's granulation") AnnotationAssertion( "UBERON:0013153") AnnotationAssertion(rdfs:label "arachnoid villus") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (1st arch maxillary endoderm) AnnotationAssertion( "EHDAA2:0000040") AnnotationAssertion( "EMAPA:16390") AnnotationAssertion(Annotation( "EMAPA:16390") "endoderm of maxillary component") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0013154") AnnotationAssertion(rdfs:label "1st arch maxillary endoderm") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (1st arch mandibular ectoderm) AnnotationAssertion( "EHDAA2:0000032") AnnotationAssertion( "EMAPA:16383") AnnotationAssertion(Annotation( "EMAPA:16383") "ectoderm of mandibular component") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0013155") AnnotationAssertion(rdfs:label "1st arch mandibular ectoderm") SubClassOf(Annotation( "EHDAA2"^^xsd:string) ) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (1st arch mandibular endoderm) AnnotationAssertion( "EHDAA2:0000033") AnnotationAssertion( "EMAPA:16384") AnnotationAssertion(Annotation( "EMAPA:16384") "endoderm of mandibular component") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0013156") AnnotationAssertion(rdfs:label "1st arch mandibular endoderm") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (1st arch maxillary-mandibular cleft) AnnotationAssertion( "EHDAA2:0000046") AnnotationAssertion( "EMAPA:16395") AnnotationAssertion(Annotation( "EHDAA2:0000046") "1st arch maxillary-mandibular groove ectoderm") AnnotationAssertion(Annotation( "EMAPA:16395") "ectoderm of maxillary-mandibular groove") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0013157") AnnotationAssertion(rdfs:label "1st arch maxillary-mandibular cleft") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (foregut-midgut junction gland) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A gland that is part of a foregut-midgut junction.") AnnotationAssertion( "EHDAA2:0000574") AnnotationAssertion( "EMAPA:17065") AnnotationAssertion(Annotation( "EMAPA:17065") "gland of foregut-midgut junction") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0013158") AnnotationAssertion(rdfs:label "foregut-midgut junction gland") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (epithalamus mantle layer) AnnotationAssertion( "EHDAA2:0000449") AnnotationAssertion( "EHDAA:5435") AnnotationAssertion( "EMAPA:17533") AnnotationAssertion( "VHOG:0000913") AnnotationAssertion(Annotation( "VHOG:0000913") "mantle layer epithalamus") AnnotationAssertion( "mantle layer of epithalamus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0013159") AnnotationAssertion(rdfs:label "epithalamus mantle layer") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (epithalamus ventricular layer) AnnotationAssertion( "EHDAA2:0000450") AnnotationAssertion( "EHDAA:5437") AnnotationAssertion( "EMAPA:17535") AnnotationAssertion( "VHOG:0000884") AnnotationAssertion(Annotation( "VHOG:0000884") "ventricular layer epithalamus") AnnotationAssertion( "ventricular layer of epithalamus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0013160") AnnotationAssertion(rdfs:label "epithalamus ventricular layer") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (left lateral ventricle) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A telencephalic ventricle that is in_the_left_side_of a telencephalon.") AnnotationAssertion( "https://github.com/obophenotype/uberon/wiki/Modeling-paired-structures-Design-Pattern"^^xsd:anyURI) AnnotationAssertion( ) AnnotationAssertion( "FMA:78450") AnnotationAssertion( "left telencephalic ventricle") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0013161") AnnotationAssertion(rdfs:label "left lateral ventricle") SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (right lateral ventricle) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A telencephalic ventricle that is in_the_right_side_of a telencephalon.") AnnotationAssertion( "https://github.com/obophenotype/uberon/wiki/Modeling-paired-structures-Design-Pattern"^^xsd:anyURI) AnnotationAssertion( ) AnnotationAssertion( "FMA:78449") AnnotationAssertion( "right telencephalic ventricle") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0013162") AnnotationAssertion(rdfs:label "right lateral ventricle") SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (molariform tooth) AnnotationAssertion(Annotation( "ISBN:0073040584"^^xsd:string) "A molar or premolar.") AnnotationAssertion(Annotation( ) "postcanine tooth") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "ISBN:0073040584"^^xsd:string) "cheek tooth") AnnotationAssertion(Annotation( "ISBN:0073040584"^^xsd:string) "molariform") AnnotationAssertion( "UBERON:0013164") AnnotationAssertion(rdfs:label "molariform tooth") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (epiglottic vallecula) AnnotationAssertion(Annotation( ) Annotation( "ISBN:0073040584"^^xsd:string) "A depression in front of the epiglottis, in which food is temporarily gathered as the animal chews.") AnnotationAssertion(Annotation( "FMA:55037") "Region of surface of viscerocranial mucosa, which is a depression located between the median and lateral glosso-epiglottic folds. Examples: There are only two instances, right and left epiglottic valleculas[FMA:55037].") AnnotationAssertion( "vallecula") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:55037") AnnotationAssertion(Annotation( ) "vallecula epiglottica") AnnotationAssertion(Annotation( "FMA:55037") "vallecula of epiglottis") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0013165") AnnotationAssertion(rdfs:label "epiglottic vallecula") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (vallecula of cerebellum) AnnotationAssertion(Annotation( ) "On the upper surface of the cerebellum the vermis is elevated above the level of the hemispheres, but on the under surface it is sunk almost out of sight in the bottom of a deep depression between them; this depression is called the vallecula of the cerebellum, and lodges the posterior part of the medulla oblongata.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:vlcb") AnnotationAssertion( "FMA:75267") AnnotationAssertion( "NCIT:C12237") AnnotationAssertion(Annotation( "FMA:75267") Annotation( ) "vallecula cerebelli") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0013166") AnnotationAssertion(rdfs:label "vallecula of cerebellum") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (cricopharyngeal ligament) AnnotationAssertion(Annotation( ) "Laryngeal ligament that connects the cricoid cartilage to the pharynx[WP,modified].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:55260") AnnotationAssertion( "crico-pharyngeal ligament") AnnotationAssertion(Annotation( ) Annotation( ) "ligamentum cricopharyngeum") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0013167") AnnotationAssertion(rdfs:label "cricopharyngeal ligament") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (thyroepiglottic ligament) AnnotationAssertion(Annotation( ) "Laryngeal ligament that connects the epiglottis to the thyroid cartilage[WP,modified].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:55230") AnnotationAssertion( "NCIT:C33777") AnnotationAssertion(Annotation( "ncithesaurus:Thyroepiglottic_Ligament") "UMLS:C0225514") AnnotationAssertion(Annotation( ) "ligamentum thyroepiglotticum") AnnotationAssertion(Annotation( "FMA:55230") "thyroepiglottic ligament") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0013168") AnnotationAssertion(rdfs:label "thyroepiglottic ligament") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (vestibular ligament) AnnotationAssertion(Annotation( ) Annotation( "MURDOCH:2193") "The vestibular fold is a fibroelastic band which passes from the ventral margin of the cuneiform cartilage to the cranial dorsal surface of the thyroid cartilage. It forms the support for the free edge of the vestibular fold.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:64147") AnnotationAssertion(Annotation( ) Annotation( ) "ligamentum vestibulare") AnnotationAssertion(Annotation( ) "ventricular ligament") AnnotationAssertion( "vestibular ligament of larynx") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0013169") AnnotationAssertion(rdfs:label "vestibular ligament") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (cricoarytenoid ligament) AnnotationAssertion(Annotation( ) "Laryngeal ligament that connects the cricoid and arytenoid cartilages[WP,modified].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:55261") AnnotationAssertion(Annotation( "FMA:55261") "crico-arytenoid ligament") AnnotationAssertion(Annotation( ) Annotation( ) "ligamentum cricoaryteneoideum") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0013170") AnnotationAssertion(rdfs:label "cricoarytenoid ligament") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (cricothyroid ligament) AnnotationAssertion(Annotation( ) Annotation( "MURDOCH:483") "This attaches the caudal border of the thyroid cartilage to the ventral arch of the cricoid cartilage. Its sheetlike ventral portion is sometimes referred to as the cricothyroid membrane. Being elastic, it 'balances' movement at the hinge-like cricothyroid joint and determines the resting position of the larynx when the muscles are relaxed[MURDOCH]. The cricothyroid ligament is the larger part of the laryngeal membrane, continuing inferiorly as a median or anterior part and twin lateral ligaments. The median cricothyroid ligament is a flat band of white tissue joining the cricoid and thyroid cartilages, while the lateral cricothyroid ligament is also known as the cricothyroid membrane (also called conus elasticus).") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:55233") AnnotationAssertion( "NCIT:C32403") AnnotationAssertion(Annotation( "ncithesaurus:Cricothyroid_Ligament") "UMLS:C0225542") AnnotationAssertion( "crico-thyroid ligament") AnnotationAssertion(Annotation( ) Annotation( ) "ligamentum cricothyreoideum") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0013171") AnnotationAssertion(rdfs:label "cricothyroid ligament") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (cricotracheal ligament) AnnotationAssertion(Annotation( ) Annotation( "MURDOCH:486") "The cricotracheal ligament connects the cricoid cartilage with the first ring of the trachea[WP]. The caudal border of the cricoid cartilage is joined to the first ring of the trachea by this ligament. It is an extrinsic laryngeal ligament. It resembles the fibrous membrane which connects the cartilaginous rings of the trachea to each other.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:55259") AnnotationAssertion( "NCIT:C32405") AnnotationAssertion(Annotation( "ncithesaurus:Cricotracheal_Ligament") "UMLS:C0225543") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0013172") AnnotationAssertion(rdfs:label "cricotracheal ligament") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (anterior part of tympanic bone) AnnotationAssertion(Annotation( "ncithesaurus:Anterior_Wall_of_the_Tympanum") "The anterior aspect of the tympanum.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:56478") AnnotationAssertion( "NCIT:C32117") AnnotationAssertion(Annotation( "ncithesaurus:Anterior_Wall_of_the_Tympanum") "UMLS:C1510916") AnnotationAssertion(Annotation( "FMA:56478") "anterior surface of tympanic plate") AnnotationAssertion( "anterior wall of tympanic cavity") AnnotationAssertion( "anterior wall of tympanum") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0013173") AnnotationAssertion(rdfs:label "anterior part of tympanic bone") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (entotympanic bone) AnnotationAssertion(Annotation( ) "Entotympanics are independent elements present in the auditory bullae of various eutherians.") AnnotationAssertion( "uberon") AnnotationAssertion( "entotyympanic") AnnotationAssertion( "UBERON:0013190") AnnotationAssertion(rdfs:label "entotympanic bone") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (ovarian cortex) AnnotationAssertion(Annotation( "MGI:anna"^^xsd:string) "The layer of the ovarian stroma lying immediately beneath the tunica albuginea, composed of connective tissue cells and fibers, among which are scattered primary and secondary (antral) follicles in various stages of development; the cortex varies in thickness according to the age of the individual, becoming thinner with advancing years; included in the follicles are the cumulus oophorus, membrana granulosa (and the granulosa cells inside it), corona radiata, zona pellucida, and primary oocyte; the zona pellucida, theca of follicle, antrum and liquor folliculi are also contained in the follicle; also in the cortex is the corpus luteum derived from the follicles.") AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37927") AnnotationAssertion( "FMA:18613") AnnotationAssertion( "NCIT:C33243") AnnotationAssertion(Annotation( "ncithesaurus:Ovarian_Cortex") "UMLS:C0227878") AnnotationAssertion(Annotation( "FMA:18613") "cortex of ovary") AnnotationAssertion(Annotation( "FMA:18613") "cortex ovarii (zona parenchymatosa)") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0013191") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "ovarian cortex") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (ovarian medulla) AnnotationAssertion(Annotation( "MGI:anna"^^xsd:string) "Highly vascular stroma found in the center of the ovary that forms from embryonic mesenchyme and contains blood vessels, lymphatic vessels, and nerves; this stroma forms the tissue of the hilum by which the ovarian ligament is attached, and through which the blood vessels enter; it does not contain any ovarian follicles.") AnnotationAssertion(Annotation( "NCIT") "composed of loose connective tissue that contains blood vessels, lymph vessels and nerves") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37928") AnnotationAssertion( "FMA:18616") AnnotationAssertion( "NCIT:C33245") AnnotationAssertion(Annotation( "ncithesaurus:Ovarian_Medulla") "UMLS:C0227879") AnnotationAssertion(Annotation( "FMA:18616") "medulla of ovary") AnnotationAssertion(Annotation( "FMA:18616") "medulla ovarii (zona vasculosa)") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "zona vasculosa of Waldeyer") AnnotationAssertion( "UBERON:0013192") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "ovarian medulla") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (parakeratinized epithelium) AnnotationAssertion(Annotation( ) "An epithelium that is characterized by incomplete keratinization of the cells in the stratum corneum. The cells are flattened and composed primarily of packed tonofilaments. However, the cells may retain remnants of nuclei and other organelles.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0013193") AnnotationAssertion(rdfs:comment "Example: parts of oral epithelium") AnnotationAssertion(rdfs:label "parakeratinized epithelium") SubClassOf( ) # Class: (orthokeratinized epithelium) AnnotationAssertion(Annotation( ) "A keratinized epithelium in which the cells of the stratum corneum become very flat, loose their nuclei and cytoplasmic organelles and are now composed of densely packed tonofilaments cemented by filaggrin.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0013194") AnnotationAssertion(rdfs:label "orthokeratinized epithelium") SubClassOf( ) # Class: (parakeratinized epithelium of gingiva) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A parakeratinized epithelium that is part of a gingiva.") AnnotationAssertion( "gingival parakeratinized epithelium") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0013195") AnnotationAssertion(rdfs:label "parakeratinized epithelium of gingiva") SubClassOf( ) SubClassOf( ) # Class: (stria of neuraxis) AnnotationAssertion( "stria") AnnotationAssertion(Annotation( ) "striae") AnnotationAssertion( "FMA:83854") AnnotationAssertion(Annotation( "FMA:83854") "neuraxis stria") AnnotationAssertion(Annotation( ) "neuraxis striae") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0013199") AnnotationAssertion(rdfs:label "stria of neuraxis") SubClassOf( ) # Class: (olfactory pathway) AnnotationAssertion(Annotation( "MESH:A08.186.211.577.699") "Set of nerve fibers conducting impulses from olfactory receptors to the cerebral cortex. It includes the olfactory nerve; olfactory bulb; olfactory tract, olfactory tubercle, anterior perforated substance, and olfactory cortex. The term rhinencephalon is restricted to structures in the CNS receiving fibers from the olfactory bulb.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "MESH:A08.186.211.577.699") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "MESH:A08.186.211.577.699") "anterior perforated substance") AnnotationAssertion(Annotation( "MESH:A08.186.211.577.699") "rhinencephalon") AnnotationAssertion( "UBERON:0013201") AnnotationAssertion(rdfs:label "olfactory pathway") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (hypogastrium) AnnotationAssertion(Annotation( ) "The hypogastrium (or hypogastric region, or pubic region) is an area of the human abdomen located below the navel.") AnnotationAssertion( "hypogastric") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "CALOHA:TS-2346") AnnotationAssertion( "FMA:14602") AnnotationAssertion( "NCIT:C32755") AnnotationAssertion(Annotation( "ncithesaurus:Hypogastric_Region") "UMLS:C0230189") AnnotationAssertion(Annotation( "FMA:14602") "hypogastric part of abdomen") AnnotationAssertion(Annotation( "FMA:14602") "hypogastric region") AnnotationAssertion(Annotation( "FMA:14602") "pubic part of abdomen") AnnotationAssertion(Annotation( "FMA:14602") "pubic region") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) "regio pubica") AnnotationAssertion(Annotation( "FMA:14602") "suprapubic region") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "hypogastric region") AnnotationAssertion(Annotation( ) "pubic region") AnnotationAssertion( "UBERON:0013203") AnnotationAssertion(rdfs:label "hypogastrium") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (cerumen gland) AnnotationAssertion(Annotation( ) "A specialized sudoriferous gland (sweat glands) located subcutaneously in the external auditory canal.") AnnotationAssertion(Annotation( ) Annotation( "ISBN:0123813611"^^xsd:string) ) AnnotationAssertion( "Ceruminous glands are simple, coiled, tubular glands made up of an inner secretory layer of cells and an outer myoepithelial layer of cells. The glands drain into larger ducts, which then drain into the guard hairs that reside in the external auditory canal. Here they produce cerumen, or earwax, by mixing their secretion with sebum and dead epidermal cells") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "NCIT:C32294") AnnotationAssertion(Annotation( "ncithesaurus:Ceruminous_Gland") "UMLS:C0229352") AnnotationAssertion( "cerumen-secreting gland") AnnotationAssertion( "ceruminous gland") AnnotationAssertion(Annotation( "ISBN:0123813611"^^xsd:string) "ceruminous sweat gland") AnnotationAssertion( "earwax gland") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0013211") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "cerumen gland") SubClassOf(Annotation( "ISBN:0123813611"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (anal sac gland secretion) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A bodily secretion that is produced by a gland of anal sac.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "the anal gland secretions of species such as civet and beavers are used perfumery") AnnotationAssertion(Annotation( "NCBITaxon:29132") Annotation( ) "castoreum") AnnotationAssertion(Annotation( "NCBITaxon:9673") Annotation( ) "civet") AnnotationAssertion( "uberon") AnnotationAssertion( "anal gland secretion") AnnotationAssertion(Annotation( ) Annotation( ) "hyena butter") AnnotationAssertion(Annotation( "NCBITaxon:30533") "musk") AnnotationAssertion( "odorous sac") AnnotationAssertion( "UBERON:0013212") AnnotationAssertion(rdfs:label "anal sac gland secretion") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (udder) AnnotationAssertion(Annotation( ) "A large pendulous organ consisting of two or more mammary glands enclosed in a common envelope and each provided with a single nipple.") AnnotationAssertion(Annotation( ) "An udder is an organ formed of the mammary glands of female quadruped mammals, especially ruminants such as cattle, goats, sheep and deer. The udder is a single mass hanging beneath the animal, consisting of pairs of mammary glands. In cattle there are normally two pairs, in sheep, goats and deer there is one pair, and in some animals such as pigs there are many pairs. Udder care and hygiene in cows is important in milking, aiding uninterrupted and untainted milk production, and preventing mastitis. Products exist to soothe the chapped skin of the udder. This helps prevent bacterial infection, and reduces irritation during milking by the cups, and so the cow is less likely to kick the cups off[Wikipedia:Udder].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0013216") AnnotationAssertion(rdfs:label "udder") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "1") ObjectSomeValuesFrom( )) SubClassOf( ObjectMinCardinality(2 )) # Class: (zygomatic plate) AnnotationAssertion(Annotation( ) "In rodent anatomy, the zygomatic plate is a bony plate derived from the flattened front part of the zygomatic arch (cheekbone). At the back, it connects to the front (maxillary) root of the zygomatic arch, and at the top it is connected to the rest of the skull via the antorbital bridge. It is part of the maxillary bone, or upper jaw, which also contains the upper cheekteeth. Primitively, rodents have a nearly horizontal zygomatic plate. In association with specializations in zygomasseteric system, several distinct morphologies have developed across the order. The term is also used for an analogous structure in some South American typotheres, including Pseudotypotherium and Medistylus.") AnnotationAssertion( ) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0013217") AnnotationAssertion(rdfs:label "zygomatic plate") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (rete mirabile) AnnotationAssertion(Annotation( ) "A rete mirabile (Latin for 'wonderful net'; plural retia mirabilia) is a complex of arteries and veins lying very close to each other, found in some vertebrates. The rete mirabile utilizes countercurrent blood flow within the net (blood flowing in opposite directions. ) It exchanges heat, ions, or gases between vessel walls so that the two bloodstreams within the rete maintain a gradient with respect to temperature, or concentration of gases or solutes.") AnnotationAssertion( ) AnnotationAssertion( "FMA:76728") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "red body") AnnotationAssertion(Annotation( ) "red gland") AnnotationAssertion(Annotation( ) "rete mirabilia") AnnotationAssertion(Annotation( ) "rete mirabilis") AnnotationAssertion(Annotation( ) Annotation( ) "retie mirabilia") AnnotationAssertion(Annotation( ) "wonderful net") AnnotationAssertion( "UBERON:0013218") AnnotationAssertion(rdfs:comment "GAT in FMA") AnnotationAssertion(rdfs:label "rete mirabile") SubClassOf( ) # Class: (alveolar gland) AnnotationAssertion(Annotation( ) "In contrast to tubular glands, in the second main variety of gland, the secretory portion is enlarged and the lumen variously increased in size. These are termed alveolar glands (or saccular glands, or acinar glands, or acinous glands). Some sources draw a clear distinction between acinar and alveolar glands, based upon the shape of the lumen. A further complication in the case of the alveolar glands may occur in the form of still smaller saccular diverticuli growing out from the main sacculi. These are termed alveoli. The term 'tubulo-alveolar' (or 'tubulo-acinar', or 'compound tubulo-acinar', or 'compound tubulo-alveolar') is used to describe glands that start out as branched tubular, and branch further to terminate in alveoli. This type of gland is found in the salivary glands, esophagus, and mammary glands. The term 'racemose gland' is used to describe a 'compound alveolar gland' or 'compound acinar gland'.") AnnotationAssertion( ) AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "acinar gland") AnnotationAssertion(Annotation( ) "acinous gland") AnnotationAssertion(Annotation( ) "alveolar gland") AnnotationAssertion(Annotation( ) "saccular gland") AnnotationAssertion( "UBERON:0013223") AnnotationAssertion(rdfs:label "alveolar gland") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/9/99/Gray1105.png"^^xsd:anyURI) SubClassOf(Annotation( "Wikipedia"^^xsd:string) ) # Class: (Ciaccio's gland) AnnotationAssertion(Annotation( ) "Ciaccio's glands are small tubular accessory lacrimal glands (glandulae lacrimales accessoriae) found in the lacrimal caruncle of the eyelid. They are located in the upper border of the tarsus, approximately in the middle between the extremities of the tarsal glands. Sometimes they are situated slightly above the tarsus. There are usually 2 to 5 of these glands in the upper eyelid, and their function is to produce tears which are secreted onto the surface of the conjunctiva. They are named after Italian anatomist Giuseppe Vincenzo Ciaccio (1824b1901), who described these glands in 1874. They are sometimes called Wolfring's glands after Polish ophthalmologist Emilj von Wolfring (1832-1906), who described them during the same time period as did Ciaccio. Another type of accessory lacrimal gland are Krause's glands, which are smaller, more numerous than Ciaccio's glands and are found along the superior and inferior fornices of the conjunctival sac.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "NCIT:C32680") AnnotationAssertion(Annotation( ) "Wolfring's gland") AnnotationAssertion(Annotation( ) Annotation( "ncithesaurus:Gland_of_Wolfring") "gland of Wolfring") AnnotationAssertion( "gland of Wolfring and Ciacco") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0013224") AnnotationAssertion(rdfs:label "Ciaccio's gland") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (accessory lacrimal gland) AnnotationAssertion(Annotation( "ncithesaurus:Accessory_Lacrimal_Gland") "Serous gland with distended lumen. It includes the gland of Krause in the lacrimal sac and the gland of Wolfring on the inner surface of the upper eyelid. (NCI).") AnnotationAssertion( "may be re-classified as a sibling of lacrimal gland") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:320425") AnnotationAssertion( "NCIT:C74586") AnnotationAssertion(Annotation( "ncithesaurus:Accessory_Lacrimal_Gland") "UMLS:C0266586") AnnotationAssertion(Annotation( ) "glandulae lacrimales accessoriae") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0013226") AnnotationAssertion(rdfs:label "accessory lacrimal gland") SubClassOf( ) # Class: (crypt of Henle) AnnotationAssertion(Annotation( ) "Crypts of Henle are microscopic pockets found in scattered sections of the conjunctiva around the eyeball. They are responsible for secreting mucin, a proteinous substance that makes up the inner layer of tears. It coats the cornea to provide a hydrophilic layer that allows for even distribution of the tear film. The layer of mucin allows tears to glide evenly across the eye's surface[WP].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( ) "Henle's gland") AnnotationAssertion(Annotation( ) "crypts of Henle") AnnotationAssertion( "gland of Henle") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0013227") AnnotationAssertion(rdfs:label "crypt of Henle") SubClassOf( ) # Class: (sweat gland of eyelid) AnnotationAssertion(Annotation( ) "Glands of Moll, also known as ciliary glands, are modified apocrine sweat glands that are found on the margin of the eyelid. They are next to the base of the eyelashes, and anterior to the Meibomian glands within the distal eyelid margin. These glands are relatively large and tubular-shaped. The glands of Moll are named after Dutch oculist Jacob Anton Moll (1832-1914). Glands of Moll empty into the adjacent lashes. Glands of Moll and Zeis secrete lipid that adds to the superficial layer of the tear film, retarding evaporation. The glands of Moll are prone to infection and blockage of its duct with sebum and cell debris. Blockage of the gland's duct causes swelling which can manifest itself as a stye.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:59159") AnnotationAssertion( "NCIT:C32679") AnnotationAssertion(Annotation( "FMA:59159") "Moll's gland") AnnotationAssertion(Annotation( "FMA:59159") "ciliary gland") AnnotationAssertion(Annotation( "FMA:59159") "ciliary gland of moll") AnnotationAssertion(Annotation( "FMA:59159") "ciliary sweat gland of eyelid") AnnotationAssertion(Annotation( "FMA:59159") "gland of Moll") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0013228") AnnotationAssertion(rdfs:label "sweat gland of eyelid") SubClassOf( ) SubClassOf( ) SubClassOf( ) # Class: (eyelid gland) AnnotationAssertion(Annotation( ) "Any gland that is part of an eyelid. This includes sebaceous glands (Zeis gland, tarsal gland) and sweat glands (Moll's gland).") AnnotationAssertion( ) AnnotationAssertion( "gland of eyelid") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0013229") AnnotationAssertion(rdfs:label "eyelid gland") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (sebaceous gland of eyelid) AnnotationAssertion(Annotation( ) "Any of the sebaceous glands that are in the eyelid. Examples: gland of Zeis (services eyelashes), gland of Meibom (tarsal gland - unconnected to eyelids).") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0013231") AnnotationAssertion(rdfs:label "sebaceous gland of eyelid") SubClassOf( ) SubClassOf( ) # Class: (serous acinus) AnnotationAssertion(Annotation( ) Annotation( ) "The secretory unit of a serous gland. The acinar portion is composed of serous secreting cells.") AnnotationAssertion( "FMA:86279") AnnotationAssertion( "acinus of serous gland") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0013232") AnnotationAssertion(rdfs:label "serous acinus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (ventrum) AnnotationAssertion(Annotation( "BSPO:0000068") Annotation( "UBERONREF:0000006") "A major organism subdivisionthat is the entire part of an anatomical structure ventral to a horizontal plane and bounded on one side by the same horizontal plane.") AnnotationAssertion( "ventral") AnnotationAssertion( "front") AnnotationAssertion( "ventral region") AnnotationAssertion( "FMA:259204") AnnotationAssertion(Annotation( "FMA:259204") "front of body proper") AnnotationAssertion( "ventral part of organism") AnnotationAssertion( "ventral region of organism") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0013235") AnnotationAssertion(rdfs:label "ventrum") SubClassOf( ) # Class: (ventral trunk) AnnotationAssertion(Annotation( ) "The subdivision of the trunk that overlaps with the ventrum.") AnnotationAssertion(Annotation( "FMA:25055") "Subdivision of trunk which is demarcated from the back of trunk by the external surface of the posterolateral part of the rib cage, the anterior surface of the thoracic vertebral column and the posterior axillary lines, the external surface of the posterior abdominal wall and from the limbs by the inguinal folds; together with the back of trunk, it constitutes the trunk. Examples: There is only one trunk proper[FMA:25055].") AnnotationAssertion( "FMA:25055") AnnotationAssertion(Annotation( "FMA:25055") "anterolateral part of trunk") AnnotationAssertion(Annotation( "FMA:25055") "front of trunk") AnnotationAssertion(Annotation( "FMA:25055") "trunk front") AnnotationAssertion(Annotation( "FMA:25055") "trunk proper") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0013236") AnnotationAssertion(rdfs:label "ventral trunk") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (genital papilla of vulva) AnnotationAssertion(Annotation( ) "The genital papilla is a part of female external genitalia not present in humans, which appears as a small, fleshy flab of tissue. The papilla covers the opening of the vagina.") AnnotationAssertion( ) AnnotationAssertion( "mammalian genital papilla") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "genital papillae") AnnotationAssertion( "UBERON:0013237") AnnotationAssertion(rdfs:label "genital papilla of vulva") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (future glans) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0013238") AnnotationAssertion(rdfs:label "future glans") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (future glans penis) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A future glans that is part of a male genital tubercle.") AnnotationAssertion( "EMAPA:29252") AnnotationAssertion( "glans of male genital tubercle") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0013239") AnnotationAssertion(rdfs:label "future glans penis") SubClassOf( ) SubClassOf(Annotation( "EMAPA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (future glans clitoris) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A future glans that is part of a female genital tubercle.") AnnotationAssertion( "EMAPA:19170") AnnotationAssertion( "glans of female genital tubercle") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0013240") AnnotationAssertion(rdfs:label "future glans clitoris") SubClassOf( ) SubClassOf(Annotation( "EMAPA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (embryonic urethral groove) AnnotationAssertion(Annotation( ) "The precursor of the urethra.") AnnotationAssertion(Annotation( ) "In humans, the urethral groove is a temporary linear indentation on the underside (ventral side) of the male penis during embryonic development. It typically appears around 8 weeks of gestation and becomes closed into a normal male urethra by the 12th week") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( ) Annotation( ) "sulcus urethralis primarius") AnnotationAssertion( "urethral groove") AnnotationAssertion( "urethral sulcus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0013241") AnnotationAssertion(rdfs:label "embryonic urethral groove") SubClassOf( ) SubClassOf(Annotation( "Wikipedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (vaginal plate) AnnotationAssertion(Annotation( ) "The vaginal plate is a precursor to the inferior portion of the vagina. They form from sinovaginal bulbs.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "NCIT:C34325") AnnotationAssertion(Annotation( "ncithesaurus:Vaginal_Plate") "UMLS:C1519928") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0013244") AnnotationAssertion(rdfs:label "vaginal plate") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (sinovaginal bulb) AnnotationAssertion(Annotation( ) "Solid evaginations of the UG sinus that develops into a vaginal plate that which will will eventually canalize to form the inferior portion of the vagina.") AnnotationAssertion( ) AnnotationAssertion( "NCIT:C34297") AnnotationAssertion(Annotation( "ncithesaurus:Sinovaginal_Bulb") "UMLS:C1519330") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0013245") AnnotationAssertion(rdfs:label "sinovaginal bulb") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (male paramesonephric duct) AnnotationAssertion(Annotation( ) "An epithelial tube that develops from a Mullerian duct in a male. Later degenerates.") AnnotationAssertion( "consider separating the duct from the degenerating portion, as in EMAPA") AnnotationAssertion( "EHDAA2:0001052") AnnotationAssertion( "EMAPA:29161") AnnotationAssertion( "EMAPA:35661") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "EMAPA:29161") "degenerating mesonephric portion of male paramesonephric duct") AnnotationAssertion( "UBERON:0013247") AnnotationAssertion(rdfs:label "male paramesonephric duct") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (paradidymis) AnnotationAssertion(Annotation( ) "A small collection of convoluted tubules, situated in front of the lower part of the cord above the head of the epididymis. These tubes are lined with columnar ciliated epithelium, and probably represent the remains of a part of the Wolffian body but are functionless and vestigial. The Wolffian body operates as a kidney (metanephros) in fishes and amphibians, but the corresponding tissue is co-opted to form parts of the male reproductive system in other classes of vertebrate. The paradidymis represents a remnant of an unused, atrophied part of the Wolffian body[WP,modified].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:74055") AnnotationAssertion(Annotation( "FMA:74055") "Waldeyer's organ") AnnotationAssertion(Annotation( "FMA:74055") "organ of Giraldes") AnnotationAssertion( "organ of Giraldés") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0013248") AnnotationAssertion(rdfs:label "paradidymis") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "Wikipedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (paroophoron) AnnotationAssertion(Annotation( ) "A collection of a few scattered rudimentary tubules child, situated in the broad ligament between the epoophoron and the uterus.") AnnotationAssertion( ) AnnotationAssertion( "FMA:18692") AnnotationAssertion(Annotation( "FMA:18692") "Kobelt's tubules") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "parooephoron") AnnotationAssertion(Annotation( ) "paroöphoron") AnnotationAssertion( "UBERON:0013249") AnnotationAssertion(rdfs:label "paroophoron") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "Wikipedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (vesicular appendage of epoophoron) AnnotationAssertion(Annotation( ) "In connection with the fimbriae of the uterine tube, or with the broad ligament close to them, there are frequently one or more small pedunculated vesicles. These are termed the vesicular appendages of the epoophoron.") AnnotationAssertion(Annotation( ) "one of the small pedunculated structures attached to the uterine tubes near their fimbriated end; remnants of the mesonephric ducts[http://medical-dictionary.thefreedictionary.com/].") AnnotationAssertion(Annotation( ) "hydatid of Morgagni") AnnotationAssertion(Annotation( "FMA:18696") "hydatid of Morgagni") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:18978") AnnotationAssertion( "FMA:18696") AnnotationAssertion( "MA:0003241") AnnotationAssertion(Annotation( "FMA:18696") "appendix vesiculosus") AnnotationAssertion(Annotation( "MA:0003241") "female cystic vesicular appendage") AnnotationAssertion( "uberon") AnnotationAssertion( "appendage of epoophoron") AnnotationAssertion( "appendage of epoöphoron") AnnotationAssertion(Annotation( ) "appendices vesiculosae") AnnotationAssertion(Annotation( ) "appendices vesiculosae epoophori") AnnotationAssertion(Annotation( "FMA:18696") "vesicular appendage of epoophoron") AnnotationAssertion( "vesicular appendage of epoöphoron") AnnotationAssertion( "UBERON:0013250") AnnotationAssertion(rdfs:label "vesicular appendage of epoophoron") SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "cranial end") Annotation( "Wikipedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (remnnant of ductus deferens) AnnotationAssertion(Annotation( ) "Remnant in a female of the portion of the embryonic mesonephric duct that develops into the ductus deferens in males.") AnnotationAssertion( "FMA:76609") AnnotationAssertion(Annotation( "FMA:76609") "ductus deferens vestige") AnnotationAssertion(Annotation( ) "ductus deferens vestigialis") AnnotationAssertion(Annotation( "FMA:76609") "vestige of ductus deferens") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0013262") AnnotationAssertion(rdfs:label "remnnant of ductus deferens") SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "Wikipedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (remnant of processus vaginalis) AnnotationAssertion(Annotation( ) "Incompletely obliterated remnants of the vaginal process of the peritoneum remaining in the spermatic cord.") AnnotationAssertion( "FMA:77300") AnnotationAssertion(Annotation( "FMA:77300") "processus vaginalis vestige") AnnotationAssertion(Annotation( "FMA:77300") "vestige of processus vaginalis") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0013277") AnnotationAssertion(rdfs:label "remnant of processus vaginalis") SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (canal of Nuck) AnnotationAssertion(Annotation( ) "A patent pouch of peritoneum extending into the labia majora of women. It is analogous to the processus vaginalis in males. The pouch accompanies the gubernaculum during development of the urinary and reproductive organs, more specifically during the descent of the ovaries, and normally obliterates.") AnnotationAssertion( ) AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "canal of nuck") AnnotationAssertion(Annotation( ) "nuck%27s canal") AnnotationAssertion(Annotation( "MP:0009217") "persistent processus vaginalis") AnnotationAssertion(Annotation( ) Annotation( ) "processus vaginalis peritonei femininus") AnnotationAssertion( "UBERON:0013278") AnnotationAssertion(rdfs:label "canal of Nuck") SubClassOf( ) SubClassOf(Annotation( "cjm"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (diaphysis of fibula) AnnotationAssertion(Annotation( ) Annotation( "OBOL:automatic"^^xsd:string) "A diaphysis that is part of a fibula[Automatically generated definition].") AnnotationAssertion(Annotation( ) "The body of fibula presents four borders - the antero-lateral, the antero-medial, the postero-lateral, and the postero-medial; and four surfaces - anterior, posterior, medial, and lateral[Wikipedia:Body_of_fibula].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37892") AnnotationAssertion( "FMA:33738") AnnotationAssertion(Annotation( "FMA:33738") "body of fibula") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) "corpus fibulae") AnnotationAssertion(Annotation( "FMA:33738") "fibula diaphysis") AnnotationAssertion(Annotation( "FMA:33738") "shaft of fibula") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0013279") AnnotationAssertion(rdfs:label "diaphysis of fibula") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (diaphysis of tibia) AnnotationAssertion(Annotation( ) Annotation( "OBOL:automatic"^^xsd:string) "A diaphysis that is part of a tibia.") AnnotationAssertion(Annotation( ) "The body of the tibia has three borders and three surfaces[Wikipedia:Body_of_tibia].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37770") AnnotationAssertion( "FMA:33125") AnnotationAssertion( "MA:0003049") AnnotationAssertion(Annotation( "FMA:33125") "body of tibia") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) "corpus tibiae") AnnotationAssertion(Annotation( "FMA:33125") "shaft of tibia") AnnotationAssertion(Annotation( "FMA:33125") "tibial diaphysis") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "body of the tibia") AnnotationAssertion(Annotation( ) "shaft of tibia") AnnotationAssertion( "UBERON:0013280") AnnotationAssertion(rdfs:label "diaphysis of tibia") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (stratum argenteum of choroid) AnnotationAssertion(Annotation( ) "A silver reflective layer in the outer choroid, adjacent to the sclera, frequently present in fish larvae but not as frequent in adults.") AnnotationAssertion( ) AnnotationAssertion( "In species known to have a stratum argenteum as adults, like the toadfish (Toad- fishes), the tapetum lucidum is absent or vestigial and there is little choroidal melanin[PMID:14738502]") AnnotationAssertion(Annotation( ) "stratum argenteum") AnnotationAssertion( "choroid stratum argenteum") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0013397") AnnotationAssertion(rdfs:label "stratum argenteum of choroid") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (choroidal gland) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A gland that is part of a optic choroid.") AnnotationAssertion(Annotation( ) "Teleosts bear a body of capillary adjacent to the optic nerve called the choroidal gland. Though its function is not known, it is believed to be a supplemental oxygen carrier[Wikipedia:Choroid#In_bony_fish].") AnnotationAssertion(Annotation( ) "a gland on the dorsal half of the fish eyeball[http://en.academic.ru/dic.nsf/en_ichthyology/2916/choroid]l") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0013398") AnnotationAssertion(rdfs:comment "Requires review") AnnotationAssertion(rdfs:label "choroidal gland") SubClassOf(Annotation( "FEED:rd") ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (blood vessel layer of choroid) AnnotationAssertion(Annotation( ) "a layer of medium-diameter blood vessels of the choroid, a layer of the eye[Wikipedia:Sattler's_layer].") AnnotationAssertion( "FMA:58435") AnnotationAssertion(Annotation( "FMA:58435") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "lamina choroideae vasculosa") AnnotationAssertion(Annotation( "FMA:58435") "lamina vasculosa (choroid)") AnnotationAssertion(Annotation( "FMA:58435") "lamina vasculosa of choroid") AnnotationAssertion(Annotation( "FMA:58435") "outer layer of choroid proper") AnnotationAssertion(Annotation( "FMA:58435") "vessel layer of choroid") AnnotationAssertion(Annotation( "FMA:58435") "Haller's layer") AnnotationAssertion(Annotation( "FMA:58435") "Sattler's layer") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0013399") AnnotationAssertion(rdfs:label "blood vessel layer of choroid") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (asterion of skull) AnnotationAssertion(Annotation( ) "The asterion is the point on the skull corresponding to the posterior end of the parietomastoid suture.") AnnotationAssertion( ) AnnotationAssertion( "FMA:76625") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "asterion") AnnotationAssertion( "UBERON:0013403") AnnotationAssertion(rdfs:label "asterion of skull") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/5/56/Asterion.PNG"^^xsd:anyURI) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf(Annotation( "Wikipedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (bregma) AnnotationAssertion(Annotation( ) "The bregma is the anatomical point on the skull at which the coronal suture is intersected perpendicularly by the sagittal suture.") AnnotationAssertion(Annotation( "FMA:264776") "Anatomical cranial point where the coronal and sagittal suture lines intersect[FMA:264776].") AnnotationAssertion( ) AnnotationAssertion( "FMA:264776") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0013406") AnnotationAssertion(rdfs:label "bregma") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/2/24/Kort-lang-skalle.gif"^^xsd:anyURI) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf(Annotation( "Wikipedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (cranial cavity) AnnotationAssertion(Annotation( "UBERON:cjm"^^xsd:string) "Anatomical cavity that is the lumen of the skull and contains the brain.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37497") AnnotationAssertion( "FMA:9644") AnnotationAssertion( "MA:0003061") AnnotationAssertion( "NCIT:C77638") AnnotationAssertion(Annotation( "ncithesaurus:Cranial_Cavity") "UMLS:C0230041") AnnotationAssertion(Annotation( "FMA:9644") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "cavitas cranii") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "intracranial cavity") AnnotationAssertion(Annotation( ) "intracranial space") AnnotationAssertion( "UBERON:0013411") AnnotationAssertion(rdfs:label "cranial cavity") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/e/ee/Scheme_body_cavities-en.svg"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "Wikipedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (crotaphion) AnnotationAssertion(Annotation( ) "The crotaphion refers to two points on the skull at the tips of the greater wing of sphenoid bone. It is near the pterion.") AnnotationAssertion( ) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0013412") AnnotationAssertion(rdfs:label "crotaphion") SubClassOf( ) SubClassOf(Annotation( "Wikipedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (epicranium) AnnotationAssertion(Annotation( ) "The Epicranium is the medical term for the collection of structures covering the cranium. It consists of the muscles, aponeurosis, and skin.") AnnotationAssertion( "TODO - add parts") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0013417") AnnotationAssertion(rdfs:label "epicranium") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "Wikipedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (groove for sigmoid sinus) AnnotationAssertion(Annotation( ) "Groove for Sigmoid Sinus is a groove in the posterior cranial fossa.") AnnotationAssertion( ) AnnotationAssertion( "FMA:57122") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0013420") AnnotationAssertion(rdfs:label "groove for sigmoid sinus") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/8/81/Gray193.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (infratemporal fossa) AnnotationAssertion(Annotation( ) "The infratemporal fossa is an irregularly shaped cavity, situated below and medial to the zygomatic arch. Boundaries defined by: anteriorly, by the infratemporal surface of the maxilla and the ridge which descends from its zygomatic process posteriorly, by the articular tubercle of the temporal and the spinal angularis of the sphenoid superiorly, by the greater wing of the sphenoid below the infratemporal crest, and by the under surface of the temporal squama, containing the foramen ovale, which transmits the mandibular branch of the trigeminal nerve, and the foramen spinosum, which transmits the middle meningeal artery inferiorly, by the medial pterygoid muscle attaching to the mandible medially, by the lateral pterygoid plate laterally, by the ramus of mandible, which contains the mandibular foramen, leading to the mandibular canal through which the inferior alveolar nerve passes. This also contains the lingula, a triangular piece of bone that overlies the mandibular foramen antero-medially. Finally, the mylohyoid groove descends obliquely transmitting the mylohyoid nerve the only motor branch of the anterior division of the trigeminal nerve.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:75308") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "fossa infratemporalis") AnnotationAssertion(Annotation( ) "infratemporal") AnnotationAssertion(Annotation( ) "pterygomaxillary fossa") AnnotationAssertion( "UBERON:0013422") AnnotationAssertion(rdfs:label "infratemporal fossa") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/a/a7/Gray189.png"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "Wikipedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (jugal point) AnnotationAssertion(Annotation( ) "The jugal point is the point at the anterior end of the upper border of the zygomatic arch where the masseteric and maxillary edges meet at an angle.") AnnotationAssertion( ) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0013423") AnnotationAssertion(rdfs:label "jugal point") SubClassOf( ) SubClassOf(Annotation( "Wikipedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (anatomical point connecting sagittal and lambdoidal sutures) AnnotationAssertion(Annotation( ) "The occipital angle is rounded and corresponds with the point of meeting of the sagittal and lambdoidal sutures-a point which is termed the lambda (after the Greek letter of the same name); in the fetus this part of the skull is membranous, and is called the posterior fontanelle.") AnnotationAssertion(Annotation( ) "lambda") AnnotationAssertion( ) AnnotationAssertion( "FMA:264773") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "posterior fontanelle") AnnotationAssertion( "UBERON:0013424") AnnotationAssertion(rdfs:label "anatomical point connecting sagittal and lambdoidal sutures") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/5/50/Gray1193.svg"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "Wikipedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obelion) AnnotationAssertion(Annotation( ) "The point of the sagittal suture which is on a level with the parietal foramina.") AnnotationAssertion( ) AnnotationAssertion( "FMA:264774") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0013426") AnnotationAssertion(rdfs:label "obelion") SubClassOf( ) SubClassOf(Annotation( "Wikipedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (occipital bun) AnnotationAssertion(Annotation( ) "A prominent bulge, or projection, of the occipital bone at the back of the skull[WP].") AnnotationAssertion( ) AnnotationAssertion(Annotation( ) Annotation( "NCBITaxon:63221") "Occipital buns are important in scientific descriptions of classic Neanderthal crania. While common among many of mankind's ancestors, primarily robust relatives rather than gracile, the protrusion is relatively rare in modern Homo sapiens..") AnnotationAssertion( ) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0013427") AnnotationAssertion(rdfs:label "occipital bun") AnnotationAssertion( "Neanderthal:profile.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (ophryon) AnnotationAssertion(Annotation( ) "The ophryon is the point in the forehead just above the optic foramen, or eyesocket, and glabella.") AnnotationAssertion( ) AnnotationAssertion( "FMA:284930") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0013428") AnnotationAssertion(rdfs:label "ophryon") SubClassOf( ) SubClassOf(Annotation( "Wikipedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (porion) AnnotationAssertion(Annotation( ) "The porion is the point on the human skull located at the upper margin of each ear canal (external auditory meatus, external acoustic meatus). It underlies the tragus. The anatomical landmark has significance in biological anthropology and craniometry.") AnnotationAssertion( ) AnnotationAssertion( "FMA:264711") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0013436") AnnotationAssertion(rdfs:label "porion") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/a/a7/Gray189.png"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "Wikipedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (postorbital process) AnnotationAssertion(Annotation( ) "The Postorbital Process marks the rear, upper edge of the eye socket and is a projection from the frontal bone.") AnnotationAssertion( ) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0013442") AnnotationAssertion(rdfs:label "postorbital process") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pterygomaxillary fissure) AnnotationAssertion(Annotation( ) "The pterygomaxillary fissure is a fissure of the human skull. It is vertical, and descends at right angles from the medial end of the inferior orbital fissure; it is a triangular interval, formed by the divergence of the maxilla from the pterygoid process of the sphenoid. It connects the infratemporal with the pterygopalatine fossa, and transmits the terminal part of the maxillary artery. Alveolar branches of the maxillary nerve go from the pterygopalatine fossa to the infratemporal region via this fissure. In older texts, the pterygomaxillary fissure is sometimes called the pterygopalatine fissure.") AnnotationAssertion( ) AnnotationAssertion( "FMA:76627") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0013445") AnnotationAssertion(rdfs:label "pterygomaxillary fissure") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/a/a7/Gray189.png"^^xsd:anyURI) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf(Annotation( "Wikipedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (sagittal crest) AnnotationAssertion(Annotation( ) "A ridge of bone running lengthwise along the midline of the top of the skull of many mammalian and reptilian skulls and serves as an attachment site for the temporailis muscle[WP,modified].") AnnotationAssertion( "Skulls of some dinosaur species, including tyrannosaurs, possessed well developed sagittal crests. Among mammals, dogs, cats, lions, and many other carnivores have sagittal crests, as do some leaf eaters, including tapirs and some apes. Sagittal crests are found in robust great apes, and some early hominins. Prominent sagittal crests are found among male gorillas and orangutans, and do occur but only rarely in male chimpanzees such as Bili Apes") AnnotationAssertion( "The sagittal crest serves primarily for attachment of the temporalis muscle, which is one of the main chewing muscles") AnnotationAssertion(Annotation( "AAO"^^xsd:string) "Compare with: AAO:0000384 parasagittal crest (UBERON:0013402)") AnnotationAssertion( ) AnnotationAssertion( "uberon") AnnotationAssertion( "sagittal ridge") AnnotationAssertion( "UBERON:0013447") AnnotationAssertion(rdfs:label "sagittal crest") AnnotationAssertion( "Paranthropus:aethiopicus.JPG"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (sagittal keel) AnnotationAssertion(Annotation( ) "The Sagittal keel (torus) is a thickening of bone on part or all of the midline of the frontal bone, or parietal bones where they meet along the sagittal suture, or on both bones..") AnnotationAssertion(Annotation( ) Annotation( "Homo erectus") "Sagittal keels occur in Homo erectus and occasionally Homo heidelbergensis, where they probably served as an armour against shock to the roof of the skull, and as the attachment point for the temporalis muscles. Most Homo sapiens lost them likely as part of the general trend toward thinning of the cranial bones during the Pleistocene, to make room for larger brains. However there is a very small portion of modern humans who have this, but its function and etiology are unknown. Patrick Stewart of Star Trek and the martial artist Shi Yan Ming present good examples of modern humans with this feature.") AnnotationAssertion( ) AnnotationAssertion( "uberon") AnnotationAssertion( "sagittal torus") AnnotationAssertion( "UBERON:0013448") AnnotationAssertion(rdfs:label "sagittal keel") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (spheno-maxillary fossa) AnnotationAssertion(Annotation( ) "The speno-maxillary fossa is a small triangular space situated at the angle of the junction of the spheno-maxillary and pterygo-maxillary fissures, and placed beneath the apex of the orbit. It is formed above by the under surface of the body of the sphenoid and by the orbital process of the palate bone.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "NCIT:C33584") AnnotationAssertion(Annotation( "ncithesaurus:Sphenomaxillary_Fossa") "UMLS:C1519450") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0013454") AnnotationAssertion(rdfs:label "spheno-maxillary fossa") SubClassOf( ) SubClassOf(Annotation( "Wikipedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (spheno-petrosal fissure) AnnotationAssertion(Annotation( ) "The sphenopetrosal fissure (or sphenopetrosal suture) is the cranial suture between the sphenoid bone and the petrous portion of the temporal bone. It is in the middle cranial fossa.") AnnotationAssertion( ) AnnotationAssertion( "FMA:75038") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) "fissura sphenopetrosa") AnnotationAssertion(Annotation( "FMA:75038") "sphenopetrosal fissure") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0013455") AnnotationAssertion(rdfs:label "spheno-petrosal fissure") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/8/81/Gray193.png"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "Wikipedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (stephanion) AnnotationAssertion(Annotation( ) "The point where the upper temporal line cuts the coronal suture is named the stephanion.") AnnotationAssertion( ) AnnotationAssertion( "FMA:264723") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0013459") AnnotationAssertion(rdfs:label "stephanion") AnnotationAssertion( "Gray188-Coronal:suture.png"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "Wikipedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (suprainiac fossa) AnnotationAssertion(Annotation( ) "The suprainiac fossa is an elliptic depression on the occiput above the superior nuchal line, or inion.") AnnotationAssertion(Annotation( ) ) AnnotationAssertion( "UBERON:0013470") AnnotationAssertion( ) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0013460") AnnotationAssertion(rdfs:label "suprainiac fossa") SubClassOf( ) SubClassOf(Annotation( "Wikipedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (sylvian point) AnnotationAssertion(Annotation( ) "The Sylvian point is the point on the human skull nearest the Sylvian fissure and is located about 30 millimeters behind the Zygomatic process of frontal bone.") AnnotationAssertion( ) AnnotationAssertion( "FMA:49458") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0013462") AnnotationAssertion(rdfs:label "sylvian point") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (temporal fossa) AnnotationAssertion(Annotation( ) "The temporal fossa is a shallow depression on the side of the skull bounded by the temporal lines and terminating below the level of the zygomatic arch.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:75307") AnnotationAssertion( "NCIT:C33742") AnnotationAssertion(Annotation( "ncithesaurus:Temporal_Fossa") "UMLS:C0230010") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0013463") AnnotationAssertion(rdfs:label "temporal fossa") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/b/bd/Fossatemporalis.PNG"^^xsd:anyURI) SubClassOf( ) SubClassOf(Annotation( "Wikipedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (obsolete zygomasseteric system) AnnotationAssertion(Annotation( ) "The zygomasseteric system (or zygomasseteric structure) in rodents is the anatomical arrangement of the masseter muscle of the jaw and the zygomatic arch of the skull. The anteroposterior or propalinal (front-to-back) motion of the rodent jaw is enabled by an extension of the zygomatic arch and the division of the masseter into three distinct parts. The main types are described as protrogomorphous, sciuromorphous, hystricomorphous, and myomorphous.") AnnotationAssertion( "Wikipedia:Zygomasseteric_system") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0013466") AnnotationAssertion(rdfs:comment "obsoleted as it did not represent a structure") AnnotationAssertion(rdfs:label "obsolete zygomasseteric system") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (zygomatic fossa) AnnotationAssertion(Annotation( ) "The Zygomatic Fossa is an irregularly shaped cavity, situated below and on the inner side of the zygoma; bounded, in front, by the zygomatic surface of the superior maxillary bone and the ridge which descends from its malar process; behind, by the posterior border of the external pterygoid plate and the eminentia articularis; above, by the pterygoid ridge on the outer surface of the great wing of the sphenoid and the under part of the squamous portion of the temporal; below by the alveolar border of the superior maxilla; internally, by the external pterygoid plate; and externally, by the zygomatic arch ramus of the lower jaw. It contains the lower part of the temporal, the External and Internal pterygoid muscles, the internal maxillary artery and vein, and inferior maxillary nerve and their branches. At its upper and inner part may be observed two fissures, the spheno-maxillary and pterygo-maxillary.") AnnotationAssertion( ) AnnotationAssertion( "NCIT:C33898") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0013468") AnnotationAssertion(rdfs:label "zygomatic fossa") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (external occipital protuberance) AnnotationAssertion(Annotation( ) "Near the middle of the occipital squama is the external occipital protuberance, and extending lateralward from it on either side is the superior nuchal line, and above this the faintly marked highest nuchal line. It is less pronounced in females. The inion is the highest point of the external occipital protuberance. a projection on the external surface of the squamous part of the occipital bone in the midline.") AnnotationAssertion(Annotation( "MURDOCH:734") "The external occipital protuberance is a bony prominence occuring on the large area ventral to the external sagittal crest. It functions as the attachment site for the funicular part of the nuchal ligament[MURDOCH:734].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:75752") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "inion") AnnotationAssertion( "UBERON:0013469") AnnotationAssertion(rdfs:label "external occipital protuberance") AnnotationAssertion(rdfs:seeAlso "https://github.com/obophenotype/uberon/issues/166"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (retromolar space) AnnotationAssertion(Annotation( ) "The retromolar space or retromolar gap is a space at the rear of a mandible, between the back of the last molar and the anterior edge of the ascending ramus where it crosses the alveolar margin.[WP].") AnnotationAssertion( ) AnnotationAssertion(Annotation( ) Annotation( "NCBITaxon:63221") "Retromolar gap is found in some Neandertals because they had midfacial prognathism. This caused the lower toothrow to move forward, which led to the retromolar gap..") AnnotationAssertion( ) AnnotationAssertion(Annotation( ) "retromolar gap") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0013471") AnnotationAssertion(rdfs:label "retromolar space") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (upper esophagus) AnnotationAssertion(Annotation( "ncithesaurus:Upper_Third_of_the_Esophagus") "The upper one third of esophagus in which the muscle layer is composed of muscle cells of the striated type.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "NCIT:C12253") AnnotationAssertion(Annotation( "ncithesaurus:Upper_Third_of_the_Esophagus") "UMLS:C0227187") AnnotationAssertion( "uberon") AnnotationAssertion( "proximal part of esophagus") AnnotationAssertion( "upper third of esophagus") AnnotationAssertion( "UBERON:0013472") AnnotationAssertion(rdfs:label "upper esophagus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lower esophagus) AnnotationAssertion(Annotation( "ncithesaurus:Lower_Third_of_the_Esophagus") "The lower one third of the esophagus in which the muscle layer is composed of muscle cells predominantly of the smooth type.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "NCIT:C12255") AnnotationAssertion(Annotation( "ncithesaurus:Lower_Third_of_the_Esophagus") "UMLS:C0227191") AnnotationAssertion( "uberon") AnnotationAssertion( "distal part of esophagus") AnnotationAssertion( "lower third of esophagus") AnnotationAssertion( "UBERON:0013473") AnnotationAssertion(rdfs:label "lower esophagus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (middle part of esophagus) AnnotationAssertion(Annotation( "ncithesaurus:Middle_Third_of_the_Esophagus") "The middle one third of the esophagus in which the muscle layer is composed of muscle cells of the striated and smooth types.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "NCIT:C12254") AnnotationAssertion(Annotation( "ncithesaurus:Middle_Third_of_the_Esophagus") "UMLS:C0227189") AnnotationAssertion( "uberon") AnnotationAssertion( "middle third of esophagus") AnnotationAssertion( "UBERON:0013474") AnnotationAssertion(rdfs:label "middle part of esophagus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (gustatory gland) AnnotationAssertion(Annotation( ) "A serous salivary gland which resides adjacent to the moats surrounding the circumvallate papillae in the posterior one-third of the tongue, anterior to the terminal sulcus.") AnnotationAssertion( "posterior deep lingual glands produce lingual lipase, which hydrolyzes triacylglycerols in the acidic gastric lumen, the first step in the digestion of dietary fat (Hamosh & Scow, 1973; Hamosh & Burns, 1977). In view of their close proximity to the lingual lymphatic tissues, the glands were also thought to be involved in antimicrobial action and local immune response (Nair & Schroeder, 1983)[PMCID:PMC2667924]") AnnotationAssertion( "a group of tubulo-acinar serous glands located beneath the circumvallate and foliate papillae of the tongue and their ducts open into the trough at the base of the papillae. The saliva from posterior deep lingual glands is known to modulate the microenvironment at taste reception sites, and affect chemoreception (Gurkan & Bradley, 1988) and it is an important source of growth factors for taste receptor cells (Morris-Wiman et al. 2000)[PMCID:PMC2667924]") AnnotationAssertion( ) AnnotationAssertion( "FMA:293448") AnnotationAssertion(Annotation( "PMCID:PMC2667924") "posterior deep lingual gland") AnnotationAssertion(Annotation( "MGI:anna"^^xsd:string) "posterior lingual serous gland") AnnotationAssertion(Annotation( ) "von Ebner gland") AnnotationAssertion(Annotation( ) "von Ebner's gland") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0013475") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "gustatory gland") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (dermal layer of tongue) AnnotationAssertion( "tongue (dermal layer)") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0013476") AnnotationAssertion(rdfs:label "dermal layer of tongue") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lung endothelium) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A blood vessel endothelium that is part of a lung [Automatically generated definition].") AnnotationAssertion( "BTO:0004128") AnnotationAssertion( "CALOHA:TS-0573") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0004128") "respiratory endothelium") AnnotationAssertion( "UBERON:0013479") AnnotationAssertion(rdfs:label "lung endothelium") SubClassOf( ) SubClassOf( ) SubClassOf( ) # Class: (crypt of Lieberkuhn of ileum) AnnotationAssertion(Annotation( ) "An intestinal crypt that is located in the ileum.") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37839") AnnotationAssertion( "FMA:269061") AnnotationAssertion( "ileal crypt") AnnotationAssertion( "ileal crypt of Lieberkuhn") AnnotationAssertion( "ileal intestinal crypt") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0013481") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "crypt of Lieberkuhn of ileum") SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (crypt of Lieberkuhn of duodenum) AnnotationAssertion(Annotation( ) "An intestinal crypt that is located in the duodenum.") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37838") AnnotationAssertion( "FMA:269063") AnnotationAssertion( "duodenal crypt") AnnotationAssertion( "duodenal crypt of Lieberkuhn") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0013482") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "crypt of Lieberkuhn of duodenum") SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (crypt of Lieberkuhn of jejunum) AnnotationAssertion(Annotation( ) "An intestinal crypt that is located in the jejunum.") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37840") AnnotationAssertion( "FMA:269065") AnnotationAssertion( "jejunal crypt") AnnotationAssertion( "jejunal crypt of Lieberkuhn") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0013483") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "crypt of Lieberkuhn of jejunum") SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (crypt of Lieberkuhn of colon) AnnotationAssertion(Annotation( ) "An intestinal crypt that is located in the colon. The colonic crypts of Lieberkühn are straight and unbranched and lined largely with goblet cells.") AnnotationAssertion( ) AnnotationAssertion( "colonic crypt") AnnotationAssertion( "colonic crypt of Lieberkuhn") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0013485") AnnotationAssertion(rdfs:label "crypt of Lieberkuhn of colon") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (crypt of Lieberkuhn of appendix) AnnotationAssertion(Annotation( ) "An intestinal crypt that is located in the appendix.") AnnotationAssertion( ) AnnotationAssertion( "appendiceal crypt") AnnotationAssertion( "appendiceal crypt of Lieberkuhn") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0013486") AnnotationAssertion(rdfs:label "crypt of Lieberkuhn of appendix") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (epidermal ridge of digit) AnnotationAssertion(Annotation( "ncithesaurus:Epidermal_Ridges") "The grooves in the outermost layer of skin on the palms of the hands and soles of the feet where sweat glands open.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "NCIT:C32524") AnnotationAssertion(Annotation( "ncithesaurus:Epidermal_Ridges") "UMLS:C1516920") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "dermatoglyph") AnnotationAssertion( "epidermal ridge") AnnotationAssertion( "fingerprint") AnnotationAssertion( "friction ridge") AnnotationAssertion(Annotation( "MESH:E05.256") "plantar print") AnnotationAssertion( "UBERON:0013487") AnnotationAssertion(rdfs:label "epidermal ridge of digit") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (panniculus adiposus) AnnotationAssertion(Annotation( ) "The panniculus adiposus is the fatty layer of the subcutaneous tissues, superficial to a deeper vestigial layer of muscle, the panniculus carnosus. An example is the Fascia of Camper. Another example is the superficial cervical fascia[WP].") AnnotationAssertion( "It includes structures that are considered fascia by some sources but not by others. Consider merging with subcutaneous adipose tissue") AnnotationAssertion( ) AnnotationAssertion( "panniculus adiposus group") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "subcutaneous fat") AnnotationAssertion( "UBERON:0013488") AnnotationAssertion(rdfs:label "panniculus adiposus") SubClassOf( ) # Class: (superficial cervical fascia) AnnotationAssertion(Annotation( ) "Superficial cervical fascia is a thin layer of subcutaneous connective tissue that lies between the dermis of the skin and the deep cervical fascia. It contains the platysma, cutaneous nerves, blood, and lymphatic vessels. It also contains a varying amount of fat, which is its distinguishing characteristic.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:57805") AnnotationAssertion(Annotation( "FMA:57805") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "lamina superficialis fasciae cervicalis") AnnotationAssertion(Annotation( "FMA:57805") "superficial cervical fascia") AnnotationAssertion(Annotation( "FMA:57805") "superficial layer of cervical fascia") AnnotationAssertion(Annotation( "FMA:57805") "superficial layer of deep cervical fascia") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0013489") AnnotationAssertion(rdfs:comment "It is considered by some to be a part of the Panniculus adiposus, and not true fascia[WP]") AnnotationAssertion(rdfs:label "superficial cervical fascia") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "contested") Annotation( "Wikipedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (deep cervical fascia) AnnotationAssertion(Annotation( ) "The deep cervical fascia (or fascia colli in older texts) lies under cover of the Platysma, and invests the neck; it also forms sheaths for the carotid vessels, and for the structures situated in front of the vertebral column. Its attachment to the hyoid bone prevents the formation of a dewlap. The investing portion of the fascia is attached behind to the ligamentum nucha and to the spinous process of the seventh cervical vertebra. The 'alar fascia' is a portion of deep cervical fascia.") AnnotationAssertion( ) AnnotationAssertion( "FMA:21791") AnnotationAssertion(Annotation( "FMA:21791") "deep cervical fascia") AnnotationAssertion(Annotation( "FMA:21791") "deep fascia of neck") AnnotationAssertion(Annotation( "FMA:21791") "investing cervical fascia") AnnotationAssertion(Annotation( "FMA:21791") "investing layer of cervical fascia") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "fascia coli") AnnotationAssertion(Annotation( ) "fascia colli") AnnotationAssertion( "UBERON:0013490") AnnotationAssertion(rdfs:label "deep cervical fascia") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (cervical fascia) AnnotationAssertion(Annotation( ) Annotation( ) "Any fascia tissue that is part of the neck region.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:76866") AnnotationAssertion( "fascia of neck") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0013491") AnnotationAssertion(rdfs:label "cervical fascia") SubClassOf( ) SubClassOf( ) # Class: (prevertebral cervical fascia) AnnotationAssertion(Annotation( ) "The prevertebral fascia (or prevertebral layer of cervical fascia) is a fascia in the neck.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:46560") AnnotationAssertion(Annotation( "FMA:46560") "lamina prevertebralis (fascia cervicalis)") AnnotationAssertion(Annotation( "FMA:46560") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "lamina prevertebralis fasciae cervicalis") AnnotationAssertion(Annotation( "FMA:46560") "prevertebral fascia") AnnotationAssertion(Annotation( "FMA:46560") "prevertebral layer of cervical fascia") AnnotationAssertion(Annotation( "FMA:46560") "prevertebral layer of deep cervical fascia") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "prevertebral layer") AnnotationAssertion(Annotation( ) "prevertebral layer of cervical fascia") AnnotationAssertion( "UBERON:0013492") AnnotationAssertion(rdfs:label "prevertebral cervical fascia") SubClassOf( ) # Class: (abdominal fascia) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A fascia that is part of a abdomen.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:19841") AnnotationAssertion(Annotation( "FMA:19841") "endo-abdominopelvic fascia") AnnotationAssertion(Annotation( "FMA:19841") "fascia of abdomen") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0013493") AnnotationAssertion(rdfs:label "abdominal fascia") SubClassOf( ) SubClassOf( ) # Class: (muscularis orbicularis) AnnotationAssertion(Annotation( ) "A fringe of muscle running along the periphery of the panniculus.") AnnotationAssertion( ) AnnotationAssertion( "Hedgehogs roll into a ball via contraction of this muscle") AnnotationAssertion( "orbicularis muscle") AnnotationAssertion( "uberon") AnnotationAssertion( "orbicularis") AnnotationAssertion( "UBERON:0013497") AnnotationAssertion(rdfs:label "muscularis orbicularis") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (vestibulo-cochlear VIII ganglion complex) AnnotationAssertion( "requires verification") AnnotationAssertion( "EHDAA2:0004313") AnnotationAssertion( "EMAPA:17570") AnnotationAssertion( "vestibulocochlear VIII ganglion complex") AnnotationAssertion( "vestibulocochlear ganglion complex") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "EHDAA2:0004313") "vestibular VIII ganglion complex") AnnotationAssertion( "UBERON:0013498") AnnotationAssertion(rdfs:label "vestibulo-cochlear VIII ganglion complex") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (glossopharyngeal-vagus IX-X preganglion complex) AnnotationAssertion( "EMAPA:16662") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "EMAPA:16662") "glossopharyngeal-vagus preganglion complex") AnnotationAssertion( "UBERON:0013499") AnnotationAssertion(rdfs:label "glossopharyngeal-vagus IX-X preganglion complex") SubClassOf( ) SubClassOf(Annotation( "cjm"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (glossopharyngeal-vagus IX-X ganglion complex) AnnotationAssertion( "EMAPA:16796") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "EMAPA:16796") "glossopharyngeal-vagus ganglion complex") AnnotationAssertion( "UBERON:0013500") AnnotationAssertion(rdfs:label "glossopharyngeal-vagus IX-X ganglion complex") SubClassOf(Annotation( "cjm"^^xsd:string) ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (cloacal sphincter) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A sphincter muscle that is part of a cloaca.") AnnotationAssertion( ) AnnotationAssertion( "NCIT:C34129") AnnotationAssertion(Annotation( "ncithesaurus:Cloacal_Sphincter") "UMLS:C1516658") AnnotationAssertion(Annotation( ) "sphincter cloacae") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0013501") AnnotationAssertion(rdfs:comment "the muscles of the cloacal sphincter specialise into the perineal muscles in mammals (Gegenbaur, 1883; Popowsky, 1899; Nishi, 1938).") AnnotationAssertion(rdfs:label "cloacal sphincter") SubClassOf( ) SubClassOf( ) # Class: (5th arch mesenchyme) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A mesenchyme that is part of a pharyngeal arch 5.") AnnotationAssertion(Annotation( "VHOG:0001052") "5th pharyngeal arch mesenchyme") AnnotationAssertion( "uberon") AnnotationAssertion( "5th branchial arch mesenchyme") AnnotationAssertion( "pharyngeal arch 5 mesenchyme") AnnotationAssertion( "UBERON:0013502") AnnotationAssertion(rdfs:label "5th arch mesenchyme") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (caudal vertebra cartilage element) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A caudal vertebra endochondral element that is composed primarily of cartilage tissue.") AnnotationAssertion( "UBERON:0013517") AnnotationAssertion( "EHDAA2:0000260") AnnotationAssertion( "EMAPA:18044") AnnotationAssertion(Annotation( ) "coccygeal vertebra cartilage element") AnnotationAssertion(Annotation( "EHDAA2:0000260") "coccygeal vertebral cartilage condensation group") AnnotationAssertion(Annotation( "EMAPA:18044") "tail vertebral cartilage condensation") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0013503") AnnotationAssertion(rdfs:label "caudal vertebra cartilage element") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (caudal vertebra pre-cartilage condensation) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A caudal vertebra endochondral element that is composed primarily of a pre-cartilage condensation.") AnnotationAssertion( "UBERON:0013518") AnnotationAssertion( "EMAPA:18045") AnnotationAssertion(Annotation( ) "coccygeal vertebra pre-cartilage condensation") AnnotationAssertion(Annotation( "EMAPA:18045") "tail vertebral pre-cartilage condensation") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0013504") AnnotationAssertion(rdfs:label "caudal vertebra pre-cartilage condensation") SubClassOf( ) SubClassOf( ) # Class: (cervical vertebra cartilage element) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A cervical vertebra endochondral element that is composed primarily of cartilage tissue.") AnnotationAssertion( "EHDAA2:0000240") AnnotationAssertion(Annotation( "EHDAA2:0000240") "cervical vertebral cartilage condensation group") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0013505") AnnotationAssertion(rdfs:label "cervical vertebra cartilage element") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (cervical vertebra pre-cartilage condensation) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A cervical vertebra endochondral element that is composed primarily of a pre-cartilage condensation.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0013506") AnnotationAssertion(rdfs:label "cervical vertebra pre-cartilage condensation") SubClassOf( ) SubClassOf( ) # Class: (thoracic vertebra cartilage element) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A thoracic vertebra endochondral element that is composed primarily of cartilage tissue.") AnnotationAssertion( "EHDAA2:0002014") AnnotationAssertion(Annotation( "EHDAA2:0002014") "thoracic vertebral cartilage condensation group") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0013507") AnnotationAssertion(rdfs:label "thoracic vertebra cartilage element") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (thoracic vertebra pre-cartilage condensation) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A thoracic vertebra endochondral element that is composed primarily of a pre-cartilage condensation.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0013508") AnnotationAssertion(rdfs:label "thoracic vertebra pre-cartilage condensation") SubClassOf( ) SubClassOf( ) # Class: (lumbar vertebra cartilage element) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A lumbar vertebra endochondral element that is composed primarily of cartilage tissue.") AnnotationAssertion( "EHDAA2:0001038") AnnotationAssertion(Annotation( "EHDAA2:0001038") "lumbar vertebral cartilage condensation group") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0013509") AnnotationAssertion(rdfs:label "lumbar vertebra cartilage element") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lumbar vertebra pre-cartilage condensation) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A lumbar vertebra endochondral element that is composed primarily of a pre-cartilage condensation.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0013510") AnnotationAssertion(rdfs:label "lumbar vertebra pre-cartilage condensation") SubClassOf( ) SubClassOf( ) # Class: (space surrounding organism) AnnotationAssertion(Annotation( ) "The space that surrounds an organism.") AnnotationAssertion( "external to organism") AnnotationAssertion( "outside of body") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0013514") AnnotationAssertion(rdfs:label "space surrounding organism") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (subdivision of oviduct) AnnotationAssertion(Annotation( ) "A section through the tube or network of tubes that connects the ovaries to the outside of the body.") AnnotationAssertion(Annotation( "FMA"^^xsd:string) "FMA class may only represent the uterine portion") AnnotationAssertion( "FMA:18302") AnnotationAssertion(Annotation( "FMA:18302") "subdivision of oviduct") AnnotationAssertion( "subdivision of uterine tube") AnnotationAssertion(Annotation( "FMA:18302") "uterine tube zone") AnnotationAssertion(Annotation( "FMA:18302") "zone of uterine tube") AnnotationAssertion(Annotation( "FMA:18302") "subdivision of fallopian tube") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0013515") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "subdivision of oviduct") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (subdivision of tube) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0013522") AnnotationAssertion(rdfs:label "subdivision of tube") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (stomach lumen) AnnotationAssertion(Annotation( ) "The anatomical space that is enclosed by a stomach.") AnnotationAssertion(Annotation( "FMA:14585") "Organ cavity which is bound by the internal surface of the wall of stomach. Examples: There is only one cavity of stomach[FMA:14585].") AnnotationAssertion( "EMAPA:18395") AnnotationAssertion( "FMA:14585") AnnotationAssertion(Annotation( "FMA:14585") "cavity of stomach") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:14585") "gastric cavity") AnnotationAssertion( "UBERON:0013525") AnnotationAssertion(rdfs:label "stomach lumen") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (otocyst lumen) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An anatomical cavity that is part of a ear vesicle.") AnnotationAssertion( "EHDAA2:0004121") AnnotationAssertion( "EMAPA:25363") AnnotationAssertion(Annotation( "EMAPA:25363") "lumen of otocyst") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0013526") AnnotationAssertion(rdfs:label "otocyst lumen") SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pectoral flipper tubercle) AnnotationAssertion(Annotation( ) "A bump or swelling adorining the head and leading edge of a pectoral flipper, associated with the multiple joints and terminal phalanges as found in the multiple phalanges of the humpback whale.") AnnotationAssertion( "In a humpback the number of tubercles ranges from 9 to 11, with the first at the joint between the radius and metacarpal of digit II (with digit I absent)") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0013527") AnnotationAssertion(rdfs:label "pectoral flipper tubercle") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (Brodmann (1909) area 11) AnnotationAssertion(Annotation( ) "Brodmann area 11 is one of Brodmann's cytologically defined regions of the brain. It is involved in planning, reasoning, and decision making.") AnnotationAssertion(Annotation( "BIRNLEX:1742") Annotation( "NIFSTD:SumsDB_abbrevSource"^^xsd:string) Annotation( ) "B09-11") AnnotationAssertion(Annotation( "BIRNLEX:1742") "area praefrontalis") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:1742") AnnotationAssertion( "FMA:68608") AnnotationAssertion(Annotation( "BIRNLEX:1742") "UMLS:C1272533") AnnotationAssertion(Annotation( "BIRNLEX:1742") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=1036") AnnotationAssertion(Annotation( "BIRNLEX:1742") "B09-11") AnnotationAssertion(Annotation( "BIRNLEX:1742") "Brodmann (1909) area 11") AnnotationAssertion(Annotation( "BIRNLEX:1742") "Brodmann area 11, prefrontal") AnnotationAssertion(Annotation( "FMA:68608") "area 11 of Brodmann") AnnotationAssertion(Annotation( "BIRNLEX:1742") "area 11 of Brodmann-1909") AnnotationAssertion(Annotation( "FMA:68608") "medial orbital area") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:68608") "BA11") AnnotationAssertion(Annotation( ) "area 11 of Brodmann") AnnotationAssertion(Annotation( "NeuroNames:1036") "area 11 of Brodmann (guenon)") AnnotationAssertion(Annotation( "NeuroNames:1036") Annotation( ) "area orbitalis interna") AnnotationAssertion(Annotation( "NeuroNames:1036") "brodmann's area 11") AnnotationAssertion(Annotation( ) "prefrontal area 11") AnnotationAssertion( "UBERON:0013528") AnnotationAssertion(rdfs:label "Brodmann (1909) area 11") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (Brodmann area) AnnotationAssertion(Annotation( "BIRNLEX:1731") "A segmentation of the cerebral cortex on the basis of cytoarchitecture as described in Brodmann-1905, Brodmann-1909 and Brodmann-10. Maps for several species were presented. NeuroNames includes only areas in the human and in Old World monkeys. Of the latter, Brodmann studied representatives of several species including guenons (one Cercopithecus mona, one Cercocebus torquatus, and one Cercopithecus otherwise unspecified), which are all closely related African species, and one macaque (Macaca mulatta) an Asian species (Brodmann-1905). The legend to the summary map in Brodmann-1909 ascribes the areas simply to Cercopithecus. Brodmann referenced the areas by name and number. The same area number in humans and monkeys did not necessarily refer to topologically or cytoarchitecturally homologous structures. In NeuroNames the standard term for human areas consists of the English translation of Brodmann's Latin name followed by the number he assigned, e.g., agranular frontal area 6; the standard terms for monkey areas are in the format: area 6 of Brodmann-1909. He mapped a portion of areas limited to the banks of sulci, e.g., area 3 of Brodmann-1909 (Brodmann-1909) onto the adjacent, visible surface. This accounts for the fact that some areas appear larger on his surface map than on maps of other authors, e.g., area 3 of Vogts-1919. (Adapted from NeuroNames).") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:VTM") AnnotationAssertion( "BIRNLEX:1731") AnnotationAssertion( "FMA:68596") AnnotationAssertion( "NCIT:C94868") AnnotationAssertion( "WikipediaCategory:Brodmann_areas") AnnotationAssertion(Annotation( "tgbugs") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=1032") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BIRNLEX:1731") "Brodmann parcellation scheme region") AnnotationAssertion(Annotation( "BIRNLEX:1731") "Brodmann partition scheme region") AnnotationAssertion(Annotation( "BIRNLEX:1731") Annotation( ) "Brodmann's areas") AnnotationAssertion( "UBERON:0013529") AnnotationAssertion(rdfs:label "Brodmann area") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) Annotation( "Wikipedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (retrosplenial region) AnnotationAssertion(Annotation( ) "The retrosplenial region is a brain area and part of the cingulate cortex. It is defined by Brodmann area 26, Brodmann area 29 and the Brodmann area 30.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:RSP") AnnotationAssertion( "BTO:0003977") AnnotationAssertion( "DHBA:10324") AnnotationAssertion( "DHBA:266441669") AnnotationAssertion( "DMBA:16093") AnnotationAssertion( "MBA:254") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BAMS:RSP") "retrosplenial area") AnnotationAssertion(Annotation( ) "retrosplenial cortex") AnnotationAssertion(Annotation( "BTO:0003977") "retrosplenial cortex") AnnotationAssertion( "UBERON:0013531") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "retrosplenial region") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "BTO"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (Brodmann (1909) area 2) AnnotationAssertion(Annotation( "BIRNLEX:1733") Annotation( "NIFSTD:SumsDB_abbrevSource"^^xsd:string) Annotation( ) "B09-2") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:1733") AnnotationAssertion( "FMA:68598") AnnotationAssertion(Annotation( "BIRNLEX:1733") "UMLS:C1272524") AnnotationAssertion(Annotation( "BIRNLEX:1733") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=1033") AnnotationAssertion(Annotation( "BIRNLEX:1733") "B09-2") AnnotationAssertion(Annotation( "BIRNLEX:1733") "Brodmann (1909) area 2") AnnotationAssertion(Annotation( "FMA:68598") "Brodmann area 2") AnnotationAssertion(Annotation( "BIRNLEX:1733") "Brodmann area 2, caudal postcentral") AnnotationAssertion(Annotation( "FMA:68598") "Brodmann's area 2") AnnotationAssertion(Annotation( "FMA:68598") "area 2 of Brodmann") AnnotationAssertion(Annotation( "BIRNLEX:1733") "area 2 of Brodmann-1909") AnnotationAssertion(Annotation( "BIRNLEX:1733") "area postcentralis caudalis") AnnotationAssertion(Annotation( "FMA:68598") "caudal postcentral area") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:68598") "BA2") AnnotationAssertion(Annotation( "NeuroNames:1033") "area 2 of Brodmann (guenon)") AnnotationAssertion(Annotation( ) "postcentral gyrus") AnnotationAssertion( "UBERON:0013533") AnnotationAssertion(rdfs:label "Brodmann (1909) area 2") SubClassOf(Annotation( "NIFSTD"^^xsd:string) ) # Class: (Brodmann (1909) area 4) AnnotationAssertion(Annotation( "BIRNLEX:1735") "The term area 4 of Brodmann-1909 refers to a cytoarchitecturally defined portion of the frontal lobe of the guenon. It is located predominantly in the precentral gyrus. Brodmann-1909 regarded it as topographically and cytoarchitecturally homologous to the human gigantopyramidal area 4 and noted that it occupies a much greater fraction of the frontal lobe in the monkey than in the human. Distinctive features (Brodmann-1905): the cortex is unusually thick; the layers are not distinct; the cells are relatively sparsely distributed; giant pyramidal (Betz) cells are present in the internal pyramidal layer (V); lack of an internal granular layer (IV) such that the boundary between the external pyramidal layer (III) and the internal pyramidal layer (V) is indistinct; lack of a distinct external granular layer (II); a gradual transition from the multiform layer (VI) to the subcortical white matter.") AnnotationAssertion(Annotation( "BIRNLEX:1735") Annotation( "NIFSTD:SumsDB_abbrevSource"^^xsd:string) Annotation( ) "B09-4") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:1735") AnnotationAssertion( "FMA:68600") AnnotationAssertion(Annotation( "BIRNLEX:1735") "UMLS:C1272526") AnnotationAssertion(Annotation( "BIRNLEX:1735") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=1014") AnnotationAssertion(Annotation( "BIRNLEX:1735") "B09-4") AnnotationAssertion(Annotation( "BIRNLEX:1735") "Brodmann (1909) area 4") AnnotationAssertion(Annotation( "FMA:68600") "Brodmann area 4") AnnotationAssertion(Annotation( "BIRNLEX:1735") "Brodmann area 4, gigantopyramidal") AnnotationAssertion(Annotation( "FMA:68600") "Brodmann's area 4") AnnotationAssertion(Annotation( "FMA:68600") "area 4 of Brodmann") AnnotationAssertion(Annotation( "BIRNLEX:1735") "area 4 of Brodmann-1909") AnnotationAssertion(Annotation( "BIRNLEX:1735") "area gigantopyramidalis") AnnotationAssertion(Annotation( "FMA:68600") "giant pyramidal area") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:68600") "BA4") AnnotationAssertion(Annotation( "NeuroNames:1014") "area 4 of Brodmann (guenon)") AnnotationAssertion( "UBERON:0013535") AnnotationAssertion(rdfs:label "Brodmann (1909) area 4") AnnotationAssertion(rdfs:seeAlso "https://github.com/obophenotype/uberon/issues/515"^^xsd:anyURI) SubClassOf(Annotation( "NIFSTD"^^xsd:string) ) SubClassOf(Annotation( "https://github.com/obophenotype/uberon/issues/515") ObjectSomeValuesFrom( )) # Class: (Brodmann (1909) area 7) AnnotationAssertion(Annotation( ) "Brodmann area 7 is one of Brodmann's cytologically defined regions of the brain. It is involved in locating objects in space. It serves as a point of convergence between vision and proprioception to determine where objects are in relation to parts of the body.") AnnotationAssertion(Annotation( "BIRNLEX:1738") Annotation( "NIFSTD:SumsDB_abbrevSource"^^xsd:string) Annotation( ) "B09-7") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:1738") AnnotationAssertion( "FMA:68604") AnnotationAssertion(Annotation( "BIRNLEX:1738") "UMLS:C1272529") AnnotationAssertion(Annotation( "BIRNLEX:1738") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=85") AnnotationAssertion(Annotation( "BIRNLEX:1738") "B09-7") AnnotationAssertion(Annotation( "BIRNLEX:1738") "Brodmann (1909) area 7") AnnotationAssertion(Annotation( "FMA:68604") "Brodmann area 7") AnnotationAssertion(Annotation( "BIRNLEX:1738") "Brodmann area 7, superior parietal") AnnotationAssertion(Annotation( "FMA:68604") "area 7 of Brodmann") AnnotationAssertion(Annotation( "BIRNLEX:1738") "area 7 of Brodmann-1909") AnnotationAssertion(Annotation( ) Annotation( ) "area parietalis superior") AnnotationAssertion(Annotation( "BIRNLEX:1738") "area parietalis superior") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:68604") "BA7") AnnotationAssertion(Annotation( "NeuroNames:85") Annotation( ) "gyrus F3") AnnotationAssertion(Annotation( "NeuroNames:85") Annotation( ) "gyrus frontalis tertius") AnnotationAssertion(Annotation( "NeuroNames:85") Annotation( ) "regio subfrontalis") AnnotationAssertion( "UBERON:0013538") AnnotationAssertion(rdfs:label "Brodmann (1909) area 7") SubClassOf(Annotation( "NIFSTD"^^xsd:string) ) # Class: (Brodmann (1909) area 8) AnnotationAssertion(Annotation( ) "Brodmann area 8 is one of Brodmann's cytologically defined regions of the brain. It is involved in planning complex movements.") AnnotationAssertion(Annotation( "BIRNLEX:1739") Annotation( "NIFSTD:SumsDB_abbrevSource"^^xsd:string) Annotation( ) "B09-8") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:1739") AnnotationAssertion( "FMA:68605") AnnotationAssertion(Annotation( "BIRNLEX:1739") "UMLS:C1272530") AnnotationAssertion(Annotation( "BIRNLEX:1739") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=1034") AnnotationAssertion(Annotation( "BIRNLEX:1739") "B09-8") AnnotationAssertion(Annotation( "BIRNLEX:1739") "Brodmann (1909) area 8") AnnotationAssertion(Annotation( "FMA:68605") "Brodmann area 8") AnnotationAssertion(Annotation( "BIRNLEX:1739") "Brodmann area 8, intermediate frontal") AnnotationAssertion(Annotation( "FMA:68605") "area 8 of Brodmann") AnnotationAssertion(Annotation( "BIRNLEX:1739") "area 8 of Brodmann-1909") AnnotationAssertion(Annotation( ) Annotation( ) "area frontalis intermedia") AnnotationAssertion(Annotation( "BIRNLEX:1739") "area frontalis intermedia") AnnotationAssertion(Annotation( "FMA:68605") "intermediate frontal area") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:68605") "BA8") AnnotationAssertion(Annotation( "NeuroNames:1034") "area 8 of Brodmann (guenon)") AnnotationAssertion(Annotation( "NeuroNames:1034") "brodmann's area 8") AnnotationAssertion( "UBERON:0013539") AnnotationAssertion(rdfs:label "Brodmann (1909) area 8") SubClassOf(Annotation( "NIFSTD"^^xsd:string) ) # Class: (Brodmann (1909) area 9) AnnotationAssertion(Annotation( "BIRNLEX:1740") Annotation( "NIFSTD:SumsDB_abbrevSource"^^xsd:string) Annotation( ) "B09-9") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:1740") AnnotationAssertion( "FMA:68606") AnnotationAssertion(Annotation( "BIRNLEX:1740") "UMLS:C1272531") AnnotationAssertion(Annotation( "BIRNLEX:1740") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=1024") AnnotationAssertion(Annotation( "BIRNLEX:1740") "B09-9") AnnotationAssertion(Annotation( "BIRNLEX:1740") "Brodmann (1909) area 9") AnnotationAssertion(Annotation( "FMA:68606") "Brodmann area 9") AnnotationAssertion(Annotation( "BIRNLEX:1740") "Brodmann area 9, granular frontal") AnnotationAssertion(Annotation( "FMA:68606") "area 9 of Brodmann") AnnotationAssertion(Annotation( "BIRNLEX:1740") "area 9 of Brodmann-1909") AnnotationAssertion(Annotation( ) Annotation( ) "area frontalis granularis") AnnotationAssertion(Annotation( "BIRNLEX:1740") "area frontalis granularis") AnnotationAssertion(Annotation( "FMA:68606") "granular frontal area") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:68606") "BA9") AnnotationAssertion(Annotation( "NeuroNames:1024") "area 9 of Brodmann (guenon)") AnnotationAssertion(Annotation( "NeuroNames:1024") "brodmann's area 9") AnnotationAssertion( "UBERON:0013540") AnnotationAssertion(rdfs:label "Brodmann (1909) area 9") SubClassOf(Annotation( "NIFSTD"^^xsd:string) ) SubClassOf(Annotation( "BGEE:Ann") ObjectSomeValuesFrom( )) # Class: (Brodmann (1909) area 10) AnnotationAssertion(Annotation( ) "Brodmann area 10, or BA10, is part of the frontal cortex in the human brain. BA10 encompasses the most anterior part of the frontal cortex, known as the frontopolar region. This area is believed to play a part in strategic processes involved in memory retrieval and executive function. This area is also called frontopolar area 10, and it refers to a subdivision of the cytoarchitecturally defined frontal region of cerebral cortex. It occupies the most rostral portions of the superior frontal gyrus and the middle frontal gyrus. In humans, on the medial aspect of the hemisphere it is bounded ventrally by the superior rostral sulcus (H). It does not extend as far as the cingulate sulcus. Cytoarchitecturally it is bounded dorsally by the granular frontal area 9, caudally by the middle frontal area 46, and ventrally by the orbital area 47 and by the rostral area 12 or, in an early version of Brodmann's cortical map (Brodmann-1909), the prefrontal Brodmann area 11-1909.") AnnotationAssertion(Annotation( "BIRNLEX:1741") Annotation( "NIFSTD:SumsDB_abbrevSource"^^xsd:string) Annotation( ) "B09-10") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:ros") AnnotationAssertion( "BIRNLEX:1741") AnnotationAssertion( "DHBA:146034836") AnnotationAssertion( "FMA:68607") AnnotationAssertion(Annotation( "BIRNLEX:1741") "UMLS:C1272532") AnnotationAssertion(Annotation( "BIRNLEX:1741") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=76") AnnotationAssertion(Annotation( "BIRNLEX:1741") "B09-10") AnnotationAssertion(Annotation( "BIRNLEX:1741") "Brodmann (1909) area 10") AnnotationAssertion(Annotation( "FMA:68607") "Brodmann area 10") AnnotationAssertion(Annotation( "BIRNLEX:1741") "Brodmann area 10, frontoplar") AnnotationAssertion(Annotation( "FMA:68607") "area 10 of Brodmann") AnnotationAssertion(Annotation( "BIRNLEX:1741") "area 10 of Brodmann-1909") AnnotationAssertion(Annotation( "BIRNLEX:1741") "area frontopolaris") AnnotationAssertion(Annotation( "FMA:68607") "lateral orbital area") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:68607") "BA10") AnnotationAssertion(Annotation( "NeuroNames:76") "rostral sulcus") AnnotationAssertion(Annotation( "NeuroNames:76") Annotation( ) "sulcus rectus") AnnotationAssertion(Annotation( "NeuroNames:76") Annotation( ) "sulcus rectus (Krieg)") AnnotationAssertion( "UBERON:0013541") AnnotationAssertion(rdfs:label "Brodmann (1909) area 10") SubClassOf(Annotation( "NIFSTD"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (Brodmann (1909) area 12) AnnotationAssertion(Annotation( ) "Brodmann area 12 is a subdivision of the cerebral cortex of the guenon defined on the basis of cytoarchitecture. It occupies the most rostral portion of the frontal lobe. Brodmann-1909 did not regard it as homologous, either topographically or cytoarchitecturally, to rostral area 12 of the human. Distinctive features (Brodmann-1905): a quite distinct internal granular layer (IV) separates slender pyramidal cells of the external pyramidal layer (III) and the internal pyramidal layer (V); the multiform layer (VI) is expanded, contains widely dispersed spindle cells and merges gradually with the underlying cortical white matter; all cells, including the pyramidal cells of the external and internal pyramidal layers are inordinately small; the internal pyramidal layer (V) also contains spindle cells in groups of two to five located close to its border with the internal granular layer (IV).") AnnotationAssertion( "UBERON:0013530") AnnotationAssertion(Annotation( "BIRNLEX:1743") Annotation( "NIFSTD:SumsDB_abbrevSource"^^xsd:string) Annotation( ) "B09-12") AnnotationAssertion(Annotation( "BIRNLEX:1743") "area praefrontalis") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:1743") AnnotationAssertion( "FMA:68609") AnnotationAssertion(Annotation( "BIRNLEX:1743") "UMLS:C1272534") AnnotationAssertion(Annotation( "BIRNLEX:1743") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=77") AnnotationAssertion(Annotation( "BIRNLEX:1743") "B09-12") AnnotationAssertion(Annotation( "BIRNLEX:1743") "Brodmann (1909) area 12") AnnotationAssertion(Annotation( "FMA:68609") "Brodmann area 12") AnnotationAssertion(Annotation( "BIRNLEX:1743") "Brodmann area 12, prefrontal") AnnotationAssertion(Annotation( "FMA:68609") "area 12 of Brodmann") AnnotationAssertion(Annotation( "BIRNLEX:1743") "area 12 of Brodmann-1909") AnnotationAssertion(Annotation( "BIRNLEX:1743") "area praefrontalis") AnnotationAssertion(Annotation( "FMA:68609") "frontopolar area") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:68609") "BA12") AnnotationAssertion(Annotation( "NeuroNames:77") Annotation( ) "sulcus fronto-orbitalis") AnnotationAssertion( "UBERON:0013543") AnnotationAssertion(rdfs:label "Brodmann (1909) area 12") SubClassOf(Annotation( "NIFSTD"^^xsd:string) ) # Class: (Brodmann (1909) area 13) AnnotationAssertion(Annotation( ) "Brodmann area 13 is a subdivision of the cerebral cortex as defined on the guenon monkey and on the basis of cytoarchitecture. Brodmann area 13 is found in humans, however it seems to act as a bridge between the lateral and medial layers of the brain. Thus it is sometimes misidentified as not being a Brodmann area.") AnnotationAssertion(Annotation( "BIRNLEX:1744") Annotation( "NIFSTD:SumsDB_abbrevSource"^^xsd:string) Annotation( ) "B09-13") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:1744") AnnotationAssertion( "FMA:68610") AnnotationAssertion(Annotation( "BIRNLEX:1744") "OldNeuroNames:379923166") AnnotationAssertion(Annotation( "BIRNLEX:1744") "B09-13") AnnotationAssertion(Annotation( "BIRNLEX:1744") "Brodmann (1909) area 13") AnnotationAssertion(Annotation( "FMA:68610") "Brodmann area 13") AnnotationAssertion(Annotation( "BIRNLEX:1744") "area 13 of Brodmann-1909") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:68610") "BA13") AnnotationAssertion(Annotation( "FMA:68610") "area 13 of Brodmann") AnnotationAssertion( "UBERON:0013544") AnnotationAssertion(rdfs:label "Brodmann (1909) area 13") SubClassOf(Annotation( "NIFSTD"^^xsd:string) ) # Class: (Brodmann (1909) area 14) AnnotationAssertion(Annotation( ) "Brodmann Area 14 is one of Brodmann's subdivisions of the cerebral cortex in the brain. It was defined by Brodmann in the guenon monkey. No equivalent structure exists in humans.") AnnotationAssertion(Annotation( "BIRNLEX:1745") Annotation( "NIFSTD:SumsDB_abbrevSource"^^xsd:string) Annotation( ) "B09-14") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:1745") AnnotationAssertion( "FMA:68611") AnnotationAssertion(Annotation( "BIRNLEX:1745") "OldNeuroNames:2049637081") AnnotationAssertion(Annotation( "BIRNLEX:1745") "B09-14") AnnotationAssertion(Annotation( "BIRNLEX:1745") "Brodmann (1909) area 14") AnnotationAssertion(Annotation( "FMA:68611") "Brodmann area 14") AnnotationAssertion(Annotation( "BIRNLEX:1745") "area 14 of Brodmann-1909") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:68611") "BA14") AnnotationAssertion(Annotation( "FMA:68611") "area 14 of Brodmann") AnnotationAssertion( "UBERON:0013545") AnnotationAssertion(rdfs:label "Brodmann (1909) area 14") SubClassOf(Annotation( "NIFSTD"^^xsd:string) ) SubClassOf(Annotation( "vmPFC") Annotation( "WP"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (Brodmann (1909) area 15) AnnotationAssertion(Annotation( ) "Brodmann Area 15 is one of Brodmann's subdivisions of the cerebral cortex in the brain. Area 15 was defined by Brodmann in the guenon monkey, but he found no equivalent structure in humans. However, functional imaging experiments have found structures that may be homologous.") AnnotationAssertion(Annotation( "BIRNLEX:1746") Annotation( "NIFSTD:SumsDB_abbrevSource"^^xsd:string) Annotation( ) "B09-15") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:1746") AnnotationAssertion( "FMA:68612") AnnotationAssertion(Annotation( "BIRNLEX:1746") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=1010") AnnotationAssertion(Annotation( "BIRNLEX:1746") "B09-15") AnnotationAssertion(Annotation( "BIRNLEX:1746") "Brodmann (1909) area 15") AnnotationAssertion(Annotation( "FMA:68612") "Brodmann area 15") AnnotationAssertion(Annotation( "BIRNLEX:1746") "area 15 of Brodmann-1909") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:68612") "BA15") AnnotationAssertion(Annotation( "NeuroNames:1010") "area 15 of Brodmann") AnnotationAssertion(Annotation( "NeuroNames:1010") "area 15 of Brodmann (guenon)") AnnotationAssertion(Annotation( "NeuroNames:1010") "brodmann's area 15") AnnotationAssertion(Annotation( "NeuroNames:1010") Annotation( ) "insula ventralis") AnnotationAssertion( "UBERON:0013546") AnnotationAssertion(rdfs:label "Brodmann (1909) area 15") SubClassOf(Annotation( "NIFSTD"^^xsd:string) ) # Class: (Brodmann (1909) area 16) AnnotationAssertion(Annotation( ) "Brodmann area 16 is a subdivision of the cerebral cortex of the guenon defined on the basis of cytoarchitecture. It is a relatively undifferentiated cortical area that Brodmann regarded as part of the insula because of the relation of its innermost multiform layer (VI) with the claustrum (VICl). The laminar organization of cortex is almost totally lacking. The molecular layer (I) is wide as in area 15 of Brodmann-1905. The space between layer I and layer VI is composed of a mixture of pyramidal cells and spindle cells with no significant number of granule cells. Pyramidal cells clump in the outer part to form glomeruli similar to those seen in some of the primary olfactory areas (Brodmann-1905). This term also refers to an area known as peripaleocortical claustral - a cytoarchitecturally defined (agranular) portion of the insula at its rostral extreme where it approaches most closely the claustrum and the prepyriform area (Stephan-76).") AnnotationAssertion(Annotation( "BIRNLEX:1747") Annotation( "NIFSTD:SumsDB_abbrevSource"^^xsd:string) Annotation( ) "B09-16") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:1747") AnnotationAssertion( "FMA:68613") AnnotationAssertion(Annotation( "BIRNLEX:1747") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=1011") AnnotationAssertion(Annotation( "BIRNLEX:1747") "B09-16") AnnotationAssertion(Annotation( "BIRNLEX:1747") "Brodmann (1909) area 16") AnnotationAssertion(Annotation( "FMA:68613") "Brodmann area 16") AnnotationAssertion(Annotation( "FMA:68613") "area 16 of Brodmann") AnnotationAssertion(Annotation( "BIRNLEX:1747") "area 16 of Brodmann-1909") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:68613") "BA16") AnnotationAssertion(Annotation( "NeuroNames:1011") "area 16 of Brodmann (guenon)") AnnotationAssertion(Annotation( "NeuroNames:1011") "brodmann's area 16") AnnotationAssertion(Annotation( "NeuroNames:1011") Annotation( ) "insula olfactoria") AnnotationAssertion( "UBERON:0013547") AnnotationAssertion(rdfs:label "Brodmann (1909) area 16") SubClassOf(Annotation( "NIFSTD"^^xsd:string) ) # Class: (Brodmann (1909) area 19) AnnotationAssertion(Annotation( ) "Brodmann area 19, or BA19, is part of the occipital lobe cortex in the human brain. Along with area 18, it comprises the extrastriate (or peristriate) cortex. In normally-sighted humans, extrastriate cortex is a visual association area, with feature-extracting, shape recognition, attentional, and multimodal integrating functions. This area is also known as peristriate area 19, and it refers to a subdivision of the cytoarchitecturally defined occipital region of cerebral cortex. In the human it is located in parts of the lingual gyrus, the cuneus, the lateral occipital gyrus (H) and the superior occipital gyrus (H) of the occipital lobe where it is bounded approximately by the parieto-occipital sulcus. Cytoarchitecturally it is bounded on one side by the parastriate area 18 which it surrounds. Rostrally it is bounded by the angular area 39 (H) and the occipitotemporal area 37 (H) (Brodmann-1909).") AnnotationAssertion(Annotation( "BIRNLEX:1750") Annotation( "NIFSTD:SumsDB_abbrevSource"^^xsd:string) Annotation( ) "B09-19") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:1750") AnnotationAssertion( "FMA:68616") AnnotationAssertion(Annotation( "BIRNLEX:1750") "UMLS:C1272537") AnnotationAssertion(Annotation( "BIRNLEX:1750") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=1028") AnnotationAssertion(Annotation( "BIRNLEX:1750") "B09-19") AnnotationAssertion(Annotation( "BIRNLEX:1750") "Brodmann (1909) area 19") AnnotationAssertion(Annotation( "FMA:68616") "Brodmann area 19") AnnotationAssertion(Annotation( "BIRNLEX:1750") "Brodmann area 19, peristriate") AnnotationAssertion(Annotation( "FMA:68616") "Brodmann's area 19") AnnotationAssertion(Annotation( "FMA:68616") "area 19 of Brodmann") AnnotationAssertion(Annotation( "BIRNLEX:1750") "area 19 of Brodmann-1909") AnnotationAssertion(Annotation( "BIRNLEX:1750") "area peristriata") AnnotationAssertion(Annotation( "FMA:68616") "preoccipital area") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:68616") "BA19") AnnotationAssertion(Annotation( "NeuroNames:1028") "area 19 of Brodmann (guenon)") AnnotationAssertion(Annotation( "NeuroNames:1028") Annotation( ) "area praeoccipitalis") AnnotationAssertion( "UBERON:0013550") AnnotationAssertion(rdfs:label "Brodmann (1909) area 19") SubClassOf(Annotation( "NIFSTD"^^xsd:string) ) SubClassOf(Annotation( "WP"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (Brodmann (1909) area 20) AnnotationAssertion(Annotation( ) "Brodmann area 20, or BA20, is part of the temporal cortex in the human brain. The region encompasses most of the ventral temporal cortex, a region believed to play a part in high-level visual processing and recognition memory. This area is also known as inferior temporal area 20, and it refers to a subdivision of the cytoarchitecturally defined temporal region of cerebral cortex. In the human it corresponds approximately to the inferior temporal gyrus. Cytoarchitecturally it is bounded medially by the ectorhinal area 36 (H), laterally by the middle temporal area 21, rostrally by the temporopolar area 38 (H) and caudally by the occipitotemporal area 37 (H) (Brodmann-1909).") AnnotationAssertion(Annotation( "BIRNLEX:1751") Annotation( "NIFSTD:SumsDB_abbrevSource"^^xsd:string) Annotation( ) "B09-20") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:1751") AnnotationAssertion( "FMA:68617") AnnotationAssertion(Annotation( "BIRNLEX:1751") "UMLS:C1272538") AnnotationAssertion(Annotation( "BIRNLEX:1751") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=1025") AnnotationAssertion(Annotation( "BIRNLEX:1751") "B09-20") AnnotationAssertion(Annotation( "BIRNLEX:1751") "Brodmann (1909) area 20") AnnotationAssertion(Annotation( "FMA:68617") "Brodmann area 20") AnnotationAssertion(Annotation( "BIRNLEX:1751") "Brodmann area 20, inferior temporal") AnnotationAssertion(Annotation( "FMA:68617") "area 20 of Brodmann") AnnotationAssertion(Annotation( "BIRNLEX:1751") "area 20 of Brodmann-1909") AnnotationAssertion(Annotation( "BIRNLEX:1751") "area temporalis inferior") AnnotationAssertion(Annotation( "FMA:68617") "inferior temporal area") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:68617") "BA20") AnnotationAssertion(Annotation( "NeuroNames:1025") "area 20 of Brodmann (guenon)") AnnotationAssertion(Annotation( "NeuroNames:1025") "brodmann's area 20") AnnotationAssertion( "UBERON:0013551") AnnotationAssertion(rdfs:label "Brodmann (1909) area 20") SubClassOf(Annotation( "NIFSTD"^^xsd:string) ) # Class: (Brodmann (1909) area 21) AnnotationAssertion(Annotation( ) "Brodmann area 21, or BA21, is part of the temporal cortex in the human brain. The region encompasses most of the lateral temporal cortex, a region believed to play a part in auditory processing and language. Language function is left lateralized in most individuals. BA21 is superior to BA20 and inferior to BA40 and BA41. This area is also known as middle temporal area 21. It is a subdivision of the cytoarchitecturally defined temporal region of cerebral cortex. In the human it corresponds approximately to the middle temporal gyrus. It is bounded rostrally by the temporopolar area 38 (H), ventrally by the inferior temporal area 20, caudally by the occipitotemporal area 37 (H), and dorsally by the superior temporal area 22 (Brodmann-1909). [WP,unvetted].") AnnotationAssertion(Annotation( "BIRNLEX:1752") Annotation( "NIFSTD:SumsDB_abbrevSource"^^xsd:string) Annotation( ) "B09-21") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:1752") AnnotationAssertion( "FMA:68618") AnnotationAssertion(Annotation( "BIRNLEX:1752") "UMLS:C1272539") AnnotationAssertion(Annotation( "BIRNLEX:1752") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=1016") AnnotationAssertion(Annotation( "BIRNLEX:1752") "B09-21") AnnotationAssertion(Annotation( ) "BA21") AnnotationAssertion(Annotation( "BIRNLEX:1752") "Brodmann (1909) area 21") AnnotationAssertion( "Brodmann area 21") AnnotationAssertion(Annotation( "BIRNLEX:1752") "Brodmann area 21, middle temporal") AnnotationAssertion(Annotation( "FMA:68618") "area 21 of Brodmann") AnnotationAssertion(Annotation( "BIRNLEX:1752") "area 21 of Brodmann-1909") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:1016") "area 21 of Brodmann (guenon)") AnnotationAssertion(Annotation( "BIRNLEX:1752") "area temporalis media") AnnotationAssertion(Annotation( "NeuroNames:1016") "brodmann's area 21") AnnotationAssertion( "UBERON:0013552") AnnotationAssertion(rdfs:label "Brodmann (1909) area 21") SubClassOf(Annotation( "NIFSTD"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (Brodmann (1909) area 22) AnnotationAssertion(Annotation( ) "Brodmann area 22 is one of Brodmann's cytologically defined regions of the brain. It is involved in auditory processing.") AnnotationAssertion(Annotation( "BIRNLEX:1753") Annotation( "NIFSTD:SumsDB_abbrevSource"^^xsd:string) Annotation( ) "B09-22") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:1753") AnnotationAssertion( "FMA:68619") AnnotationAssertion(Annotation( "BIRNLEX:1753") "UMLS:C1272540") AnnotationAssertion(Annotation( "BIRNLEX:1753") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=1017") AnnotationAssertion(Annotation( "BIRNLEX:1753") "B09-22") AnnotationAssertion(Annotation( "BIRNLEX:1753") "Brodmann (1909) area 22") AnnotationAssertion(Annotation( "FMA:68619") "Brodmann area 22") AnnotationAssertion(Annotation( "BIRNLEX:1753") "Brodmann area 22, superior temporal") AnnotationAssertion(Annotation( "FMA:68619") "Superior temporal area") AnnotationAssertion(Annotation( "FMA:68619") "area 22 of Brodmann") AnnotationAssertion(Annotation( "BIRNLEX:1753") "area 22 of Brodmann-1909") AnnotationAssertion(Annotation( ) Annotation( ) "area temporalis superior") AnnotationAssertion(Annotation( "BIRNLEX:1753") "area temporalis superior") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:68619") "BA22") AnnotationAssertion(Annotation( "NeuroNames:1017") "area 22 of Brodmann (guenon)") AnnotationAssertion(Annotation( "NeuroNames:1017") "brodmann's area 22") AnnotationAssertion( "UBERON:0013553") AnnotationAssertion(rdfs:label "Brodmann (1909) area 22") SubClassOf(Annotation( "NIFSTD"^^xsd:string) ) # Class: (Brodmann (1909) area 23) AnnotationAssertion(Annotation( "BIRNLEX:1754") "The term area 23 of Brodmann-1909 refers to a subdivision of the cerebral cortex of the guenon defined on the basis of cytoarchitecture. Brodmann regarded it as topographically and cytoarchitecturally homologous to the combined ventral posterior cingulate area 23 and dorsal posterior cingulate area 31 of the human (Brodmann-1909). Distinctive Features (Brodmann-1905): the cortex is relatively thin; smaller cells predominate; the cell density of the multiform layer (VI) is great, producing a distinct boundary with the subcortical white matter; the internal granular layer (IV) is rather well developed; the internal pyramidal layer (V) contains a dense population of round, medium-sized ganglion cells concentrated at the border with layer IV; layers V and VI are narrow with a distinct mutual boundary.nn* Definition Source NeuroNames.") AnnotationAssertion(Annotation( "BIRNLEX:1754") Annotation( "NIFSTD:SumsDB_abbrevSource"^^xsd:string) Annotation( ) "B09-23") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:1754") AnnotationAssertion( "FMA:68620") AnnotationAssertion(Annotation( "BIRNLEX:1754") "UMLS:C1272541") AnnotationAssertion(Annotation( "BIRNLEX:1754") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=1018") AnnotationAssertion(Annotation( "BIRNLEX:1754") "B09-23") AnnotationAssertion(Annotation( "BIRNLEX:1754") "Brodmann (1909) area 23") AnnotationAssertion(Annotation( "FMA:68620") "Brodmann area 23") AnnotationAssertion(Annotation( "BIRNLEX:1754") "Brodmann area 23, ventral posterior cingulate") AnnotationAssertion(Annotation( "FMA:68620") "area 23 of Brodmann") AnnotationAssertion(Annotation( "BIRNLEX:1754") "area 23 of Brodmann-1909") AnnotationAssertion(Annotation( ) Annotation( ) "area cingularis posterior ventralis") AnnotationAssertion(Annotation( "BIRNLEX:1754") "area cingularis posterior ventralis") AnnotationAssertion(Annotation( "FMA:68620") "granular cingulate area") AnnotationAssertion(Annotation( "FMA:68620") "posterior cingulate area") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:68620") "BA23") AnnotationAssertion(Annotation( "NeuroNames:1018") "area 23 of Brodmann (guenon)") AnnotationAssertion(Annotation( "NeuroNames:1018") Annotation( ) "area cingularis posterior") AnnotationAssertion(Annotation( "NeuroNames:1018") "brodmann's area 23") AnnotationAssertion( "ventral posterior cingulate area") AnnotationAssertion( "UBERON:0013554") AnnotationAssertion(rdfs:label "Brodmann (1909) area 23") SubClassOf(Annotation( "NIFSTD"^^xsd:string) ) # Class: (Brodmann (1909) area 25) AnnotationAssertion(Annotation( ) "Brodmann area 25 (BA25) is an area in the cerebral cortex of the brain and delineated based on its cytoarchitectonic characteristics. It is also called the subgenual area or area subgenualis. It is the 25th 'Brodmann area' defined by Korbinian Brodmann (thus its name). BA25 is located in the cingulate region as a narrow band in the caudal portion of the subcallosal area adjacent to the paraterminal gyrus. The posterior parolfactory sulcus separates the paraterminal gyrus from BA25. Rostrally it is bound by the prefrontal area 11 of Brodmann.") AnnotationAssertion(Annotation( "BIRNLEX:1756") Annotation( "NIFSTD:SumsDB_abbrevSource"^^xsd:string) Annotation( ) "B09-25") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:1756") AnnotationAssertion( "FMA:68622") AnnotationAssertion(Annotation( "BIRNLEX:1756") "UMLS:C1272543") AnnotationAssertion(Annotation( "BIRNLEX:1756") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=1029") AnnotationAssertion(Annotation( "BIRNLEX:1756") "B09-25") AnnotationAssertion(Annotation( "BIRNLEX:1756") "Brodmann (1909) area 25") AnnotationAssertion(Annotation( "FMA:68622") "Brodmann area 25") AnnotationAssertion(Annotation( "BIRNLEX:1756") "Brodmann area 25, subgenual") AnnotationAssertion(Annotation( "FMA:68622") "Brodmann's area 25") AnnotationAssertion(Annotation( "FMA:68622") "area 25 of Brodmann") AnnotationAssertion(Annotation( "BIRNLEX:1756") "area 25 of Brodmann-1909") AnnotationAssertion(Annotation( "BIRNLEX:1756") "area subgenualis") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:68622") "BA25") AnnotationAssertion(Annotation( "NeuroNames:1029") "area 25 of Brodmann (guenon)") AnnotationAssertion( "UBERON:0013556") AnnotationAssertion(rdfs:label "Brodmann (1909) area 25") SubClassOf(Annotation( "NIFSTD"^^xsd:string) ) # Class: (Brodmann (1909) area 27) AnnotationAssertion(Annotation( ) "Area 27 of Brodmann-1909 is a cytoarchitecturally defined cortical area that is a rostral part of the parahippocampal gyrus of the guenon (Brodmann-1909). It is commonly regarded as a synonym of presubiculum (Crosby-62). [WP,unvetted].") AnnotationAssertion(Annotation( "BIRNLEX:1758") Annotation( "NIFSTD:SumsDB_abbrevSource"^^xsd:string) Annotation( ) "B09-27") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:1758") AnnotationAssertion( "FMA:68624") AnnotationAssertion(Annotation( "BIRNLEX:1758") "UMLS:C0175194") AnnotationAssertion(Annotation( "BIRNLEX:1758") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=1039") AnnotationAssertion(Annotation( "BIRNLEX:1758") "B09-27") AnnotationAssertion(Annotation( ) "BA27") AnnotationAssertion(Annotation( "BIRNLEX:1758") "Brodmann (1909) area 27") AnnotationAssertion(Annotation( "BIRNLEX:1758") "Brodmann area 26, presubicular") AnnotationAssertion(Annotation( "FMA:68624") "Brodmann area 27") AnnotationAssertion(Annotation( "FMA:68624") "area 27") AnnotationAssertion( "area 27 of Brodmann") AnnotationAssertion(Annotation( "BIRNLEX:1758") "area 27 of Brodmann-1909") AnnotationAssertion(Annotation( "BIRNLEX:1758") "area praesubicularis") AnnotationAssertion(Annotation( "FMA:68624") "presubicular area") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:1039") "area 27 of Brodmann (guenon)") AnnotationAssertion(Annotation( "NeuroNames:1039") "brodmann's area 27") AnnotationAssertion( "UBERON:0013558") AnnotationAssertion(rdfs:label "Brodmann (1909) area 27") SubClassOf(Annotation( "NIFSTD"^^xsd:string) ) SubClassOf(Annotation( "consider merging many sources treat as synonymous") ObjectSomeValuesFrom( )) # Class: (Brodmann (1909) area 28) AnnotationAssertion(Annotation( "BIRNLEX:1759") Annotation( "NIFSTD:SumsDB_abbrevSource"^^xsd:string) Annotation( ) "B09-28") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:1759") AnnotationAssertion( "FMA:68625") AnnotationAssertion(Annotation( "BIRNLEX:1759") "UMLS:C0598377") AnnotationAssertion(Annotation( "BIRNLEX:1759") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=1030") AnnotationAssertion(Annotation( "BIRNLEX:1759") "B09-28") AnnotationAssertion(Annotation( ) "BA28") AnnotationAssertion(Annotation( "BIRNLEX:1759") "Brodmann (1909) area 28") AnnotationAssertion(Annotation( "FMA:68625") "Brodmann area 28") AnnotationAssertion(Annotation( "BIRNLEX:1759") "Brodmann area 28, entorhinal") AnnotationAssertion( "area 28 of Brodmann") AnnotationAssertion( "area 28 of Brodmann (Crosby)") AnnotationAssertion(Annotation( "BIRNLEX:1759") "area 28 of Brodmann-1909") AnnotationAssertion(Annotation( "BIRNLEX:1759") "area entorhinalis") AnnotationAssertion(Annotation( ) Annotation( ) "area entorhinalis ventralis") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:1030") "area 28 of Brodmann (guenon)") AnnotationAssertion( "UBERON:0013559") AnnotationAssertion(rdfs:label "Brodmann (1909) area 28") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/7/76/Brodmann_Cytoarchitectonics_28.png"^^xsd:anyURI) SubClassOf(Annotation( "NIFSTD"^^xsd:string) ) SubClassOf(Annotation( "consider merging many sources treat as synonymous") ObjectSomeValuesFrom( )) # Class: (Brodmann (1909) area 32) AnnotationAssertion(Annotation( ) "The Brodmann area 32, also known in the human brain as the dorsal anterior cingulate area 32, refers to a subdivision of the cytoarchitecturally defined cingulate region of cerebral cortex. In the human it forms an outer arc around the anterior cingulate gyrus. The cingulate sulcus defines approximately its inner boundary and the superior rostral sulcus (H) its ventral boundary; rostrally it extends almost to the margin of the frontal lobe. Cytoarchitecturally it is bounded internally by the ventral anterior cingulate area 24, externally by medial margins of the agranular frontal area 6, intermediate frontal area 8, granular frontal area 9, frontopolar area 10, and prefrontal area 11-1909. (Brodmann19-09). Dorsal region of anterior cingulate gyrus is associated with rational thought processes, most notably active during the Stroop task.") AnnotationAssertion(Annotation( "BIRNLEX:1760") Annotation( "NIFSTD:SumsDB_abbrevSource"^^xsd:string) Annotation( ) "B09-32") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:1760") AnnotationAssertion( "EMAPA:36447") AnnotationAssertion( "FMA:68629") AnnotationAssertion( "MBA:972") AnnotationAssertion(Annotation( "BIRNLEX:1760") "UMLS:C1272493") AnnotationAssertion(Annotation( "BIRNLEX:1760") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=1021") AnnotationAssertion(Annotation( "BIRNLEX:1760") "B09-32") AnnotationAssertion(Annotation( "BIRNLEX:1760") "Brodmann (1909) area 32") AnnotationAssertion(Annotation( "FMA:68629") "Brodmann area 32") AnnotationAssertion(Annotation( "BIRNLEX:1760") "Brodmann area 32, dorsal anterior cingulate") AnnotationAssertion(Annotation( "FMA:68629") "Prelimbic area") AnnotationAssertion(Annotation( "FMA:68629") "area 32 of Brodmann") AnnotationAssertion(Annotation( "BIRNLEX:1760") "area 32 of Brodmann-1909") AnnotationAssertion(Annotation( ) Annotation( ) "area cingularis anterior dorsalis") AnnotationAssertion(Annotation( "BIRNLEX:1760") "area cingularis anterior dorsalis") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:68629") "BA32") AnnotationAssertion(Annotation( "NeuroNames:1021") "area 25 of Brodmann-1905") AnnotationAssertion(Annotation( "NeuroNames:1021") "area 32 of Brodmann (guenon)") AnnotationAssertion(Annotation( "NeuroNames:1021") Annotation( ) "area praelimbica") AnnotationAssertion(Annotation( "NeuroNames:1021") "brodmann's area 32") AnnotationAssertion( "UBERON:0013560") AnnotationAssertion(rdfs:label "Brodmann (1909) area 32") SubClassOf(Annotation( "NIFSTD"^^xsd:string) ) # Class: (Brodmann (1909) area 43) AnnotationAssertion(Annotation( ) "Brodmann area 43 is a subdivision of the cerebral cortex of the guenon defined on the basis of cytoarchitecture. It was described (but not labeled) on the map of cortical areas in Brodmann-1909, and it was regarded as cytoarchitecturally homologous to area 30 of Mauss in 1908 in the guenon and subcentral area 43 of the human (Brodmann-1909). The Vogts found no distinctive architectonic area of the corresponding location in the guenon (Vogts-1919).") AnnotationAssertion(Annotation( "BIRNLEX:1761") Annotation( "NIFSTD:SumsDB_abbrevSource"^^xsd:string) Annotation( ) "B09-43") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:1761") AnnotationAssertion( "FMA:68640") AnnotationAssertion(Annotation( "BIRNLEX:1761") "UMLS:C1272506") AnnotationAssertion(Annotation( "BIRNLEX:1761") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=1013") AnnotationAssertion(Annotation( "BIRNLEX:1761") "B09-43") AnnotationAssertion(Annotation( "BIRNLEX:1761") "Brodmann (1909) area 43") AnnotationAssertion(Annotation( "FMA:68640") "Brodmann area 43") AnnotationAssertion(Annotation( "BIRNLEX:1761") "Brodmann area 43, subcentral") AnnotationAssertion(Annotation( "BIRNLEX:1761") "area 43 of Brodmann-1909") AnnotationAssertion(Annotation( "FMA:68640") "area 43 of brodmann") AnnotationAssertion(Annotation( "BIRNLEX:1761") "area subcentralis") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:68640") "BA43") AnnotationAssertion(Annotation( "NeuroNames:1013") "area 43 of Brodmann (guenon)") AnnotationAssertion(Annotation( "NeuroNames:1013") "brodmann's area 43") AnnotationAssertion( "UBERON:0013561") AnnotationAssertion(rdfs:label "Brodmann (1909) area 43") SubClassOf(Annotation( "NIFSTD"^^xsd:string) ) # Class: (Brodmann (1909) area 8a) AnnotationAssertion(Annotation( "BIRNLEX:1762") Annotation( "NIFSTD:SumsDB_abbrevSource"^^xsd:string) Annotation( ) "B09-8a") AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:1762") AnnotationAssertion(Annotation( "BIRNLEX:1762") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=1034") AnnotationAssertion(Annotation( "BIRNLEX:1762") "B09-8a") AnnotationAssertion(Annotation( "BIRNLEX:1762") "Brodmann (1909) area 8a") AnnotationAssertion( "Brodmann area 8a") AnnotationAssertion(Annotation( "BIRNLEX:1762") "area 8a of Brodmann-1909") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:1034") "area 8 of Brodmann (guenon)") AnnotationAssertion(Annotation( "NeuroNames:1034") "brodmann's area 8") AnnotationAssertion( "UBERON:0013562") AnnotationAssertion(rdfs:label "Brodmann (1909) area 8a") SubClassOf(Annotation( "NIFSTD"^^xsd:string) ) # Class: (Brodmann (1909) area 40) AnnotationAssertion(Annotation( ) "Brodmann area 40, or BA40, is part of the parietal cortex in the human brain. The inferior part of BA40 is in the area of the supramarginal gyrus, which lies at the posterior end of the lateral fissure, in the inferior lateral part of the parietal lobe. It is bounded approximately by the intraparietal sulcus, the inferior postcentral sulcus, the posterior subcentral sulcus and the lateral sulcus. Cytoarchitecturally it is bounded caudally by the angular area 39 (H), rostrally and dorsally by the caudal postcentral area 2, and ventrally by the subcentral area 43 and the superior temporal area 22 (Brodmann-1909). Cytoarchitectonically defined subregions of rostral BA40/the supramarginal gyrus are PF, PFcm, PFm, PFop, and PFt. Area PF is the homologue to macaque area PF, part of the mirror neuron system, and active in humans during imitation. The supramarginal gyrus part of Brodmann area 40 is the region in the inferior parietal lobe that is involved in reading both in regards to meaning and phonology. [WP,unvetted].") AnnotationAssertion(Annotation( "BIRNLEX:1773") Annotation( "NIFSTD:SumsDB_abbrevSource"^^xsd:string) Annotation( ) "B09-40") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:1773") AnnotationAssertion( "FMA:68637") AnnotationAssertion(Annotation( "BIRNLEX:1773") "UMLS:C1272501") AnnotationAssertion(Annotation( "BIRNLEX:1773") "B09-40") AnnotationAssertion(Annotation( "BIRNLEX:1773") "Brodmann (1909) area 40") AnnotationAssertion(Annotation( "FMA:68637") "Brodmann area 40") AnnotationAssertion(Annotation( "BIRNLEX:1773") "Brodmann area 40, supramarginal") AnnotationAssertion(Annotation( "FMA:68637") "Supramarginal area 40") AnnotationAssertion(Annotation( "FMA:68637") "area 40 of Brodmann") AnnotationAssertion(Annotation( "BIRNLEX:1773") "area 40 of Brodmann-1909") AnnotationAssertion(Annotation( "BIRNLEX:1773") "area supramarginalis") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0013573") AnnotationAssertion(rdfs:label "Brodmann (1909) area 40") SubClassOf(Annotation( "NIFSTD"^^xsd:string) ) SubClassOf(Annotation( "consider merging many sources treat as synonymous") ObjectSomeValuesFrom( )) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (metapodium bone 1) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A metapodium bone that is part of a digit 1 plus metapodial segment.") AnnotationAssertion( "metapodium 1") AnnotationAssertion( "metapodium I") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0013581") AnnotationAssertion(rdfs:label "metapodium bone 1") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (metapodium bone 2) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A metapodium bone that is part of a digit 2 plus metapodial segment.") AnnotationAssertion( "metapodium 2") AnnotationAssertion( "metapodium II") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0013582") AnnotationAssertion(rdfs:label "metapodium bone 2") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (metapodium bone 3) AnnotationAssertion(Annotation( ) "A metapodial bone that is associated with digit III.") AnnotationAssertion(Annotation( ) "3rd metapodium bone") AnnotationAssertion(Annotation( ) "metapodial bone III") AnnotationAssertion( "metapodium 3") AnnotationAssertion( "metapodium III") AnnotationAssertion(Annotation( ) Annotation( "NCBITaxon:9788"^^xsd:string) "cannon bone") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0013583") AnnotationAssertion(rdfs:label "metapodium bone 3") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (metapodium bone 4) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A metapodium bone that is part of a digit 4 plus metapodial segment.") AnnotationAssertion( "metapodium 4") AnnotationAssertion( "metapodium IV") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0013584") AnnotationAssertion(rdfs:label "metapodium bone 4") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (metapodium bone 5) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A metapodium bone that is part of a digit 5 plus metapodial segment.") AnnotationAssertion( "metapodium 5") AnnotationAssertion( "metapodium V") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0013585") AnnotationAssertion(rdfs:label "metapodium bone 5") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (fused metapodial bones 3 and 4) AnnotationAssertion(Annotation( ) "An element formed from the fusion of metapodium 3 and metapodium 4 (i.e. either metatarsals 3 and 4 or metacarpals 3 and 4).") AnnotationAssertion( "this class can be used in annotation when it is unclear whether the element is a fusion of the metacarpal and metatarsal elements.") AnnotationAssertion( ) AnnotationAssertion( "fused metapodials 3/4") AnnotationAssertion(Annotation( ) "os metapodiale III et IV") AnnotationAssertion( "uberon") AnnotationAssertion( "metapodial 3+4") AnnotationAssertion( "UBERON:0013586") AnnotationAssertion(rdfs:label "fused metapodial bones 3 and 4") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (fused metacarpal bones 3 and 4) AnnotationAssertion(Annotation( ) "An element formed from the fusion of metacarpal 3 and metacarpal 4.") AnnotationAssertion( "In many artiodactyls, the 3rd & 4th metapodials are fused, creating a main metapodial.") AnnotationAssertion( "fused metacarpal 3/4") AnnotationAssertion(Annotation( "NominaAnatomicaVeterinaria:2005"^^xsd:string) Annotation( ) "os metacarpale III et IV") AnnotationAssertion( "uberon") AnnotationAssertion( "metacarpal 3+4") AnnotationAssertion( "UBERON:0013587") AnnotationAssertion(rdfs:label "fused metacarpal bones 3 and 4") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (fused metatarsal bones 3 and 4) AnnotationAssertion(Annotation( ) "An element formed from the fusion of metatarsal 3 and metatarsal 4.") AnnotationAssertion( "In many artiodactyls, the 3rd & 4th metapodials are fused, creating a main metapodial.") AnnotationAssertion( "fused metatarsal 3/4") AnnotationAssertion(Annotation( "NominaAnatomicaVeterinaria:2005"^^xsd:string) Annotation( ) "os metatarsale III et IV (Ru)") AnnotationAssertion( "uberon") AnnotationAssertion( "metatarsal 3+4") AnnotationAssertion( "UBERON:0013588") AnnotationAssertion(rdfs:label "fused metatarsal bones 3 and 4") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (koniocortex) AnnotationAssertion(Annotation( ) "Regions of the cerebal cortex characterized by a particularly well-developed inner granular layer (layer 4); this type of cerebral cortex is represented by the primary sensory Brodmann area 17 of the visual cortex, Brodmann areas 1-3 of the somatic sensory cortex, and Brodmann area 41 of the auditory cortex.") AnnotationAssertion( ) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0013589") AnnotationAssertion(rdfs:label "koniocortex") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (cruciate sulcus) AnnotationAssertion(Annotation( ) "A deep groove which runs transversely across the rostro-dorsal surface of the cerebrum and which is one of the landmarks on the cerebral cortex.") AnnotationAssertion(Annotation( ) "cruciate sulci") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0013590") AnnotationAssertion(rdfs:label "cruciate sulcus") SubClassOf( ) # Class: (postsylvian sulcus) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0013591") AnnotationAssertion(rdfs:label "postsylvian sulcus") SubClassOf( ) # Class: (presylvian sulcus) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0013592") AnnotationAssertion(rdfs:label "presylvian sulcus") SubClassOf( ) # Class: (suprasylvian sulcus) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0013593") AnnotationAssertion(rdfs:label "suprasylvian sulcus") SubClassOf( ) # Class: (ectosylvian sulcus) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0013594") AnnotationAssertion(rdfs:label "ectosylvian sulcus") SubClassOf( ) # Class: (postlateral sulcus) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0013595") AnnotationAssertion(rdfs:label "postlateral sulcus") SubClassOf( ) # Class: (brain coronal sulcus) AnnotationAssertion(Annotation( ) "coronal sulcus") AnnotationAssertion( "coronal sulcus of brain") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0013596") AnnotationAssertion(rdfs:label "brain coronal sulcus") SubClassOf( ) # Class: (accessory nucleus of optic tract) AnnotationAssertion(Annotation( ) "One of a set of small groups of neuron cell bodies located along the trajectory of optic fibers in the mesencephalon. These consist of the posterior nucleus [TA] (nucleus posterior [TA]), medial nucleus [TA] (nucleus medialis [TA]), and lateral nucleus [TA] (nucleus lateralis [TA]), which are also called the posterior, medial, and lateral terminal nuclei. The connections of these nuclei, along with the nucleus of the optic tract, make up the accessory optic system that appears to be concerned with retinal slip in specific directions.") AnnotationAssertion( "most vertebrates have at least one AON. Mammals have 4.[ISBN:0471888893]") AnnotationAssertion( "FMA:256154") AnnotationAssertion(Annotation( ) "nuclei accessorii tractus optici") AnnotationAssertion( "nucleus of accessory optic system") AnnotationAssertion(Annotation( ) "terminal nucleus of accessory optic tract") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0013598") AnnotationAssertion(rdfs:label "accessory nucleus of optic tract") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (dorsal accessory nucleus of optic tract) AnnotationAssertion( ) AnnotationAssertion( "BAMS:DT") AnnotationAssertion( "DMBA:16590") AnnotationAssertion( "FMA:77651") AnnotationAssertion( "MBA:75") AnnotationAssertion( "dorsal terminal nucleus of accessory optic tract") AnnotationAssertion(Annotation( "ABA:DT") "dorsal terminal nucleus of the accessory optic tract") AnnotationAssertion(Annotation( "FMA:77651") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "nucleus accessorius posterior tractus optici") AnnotationAssertion(Annotation( "FMA:77651") "posterior accessory nucleus of optic tract") AnnotationAssertion( "posterior terminal nucleus of accessory optic tract") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0013599") AnnotationAssertion(rdfs:label "dorsal accessory nucleus of optic tract") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (lateral accessory nucleus of optic tract) AnnotationAssertion( ) AnnotationAssertion( "BAMS:LT") AnnotationAssertion( "DHBA:13236") AnnotationAssertion( "FMA:77652") AnnotationAssertion( "MBA:66") AnnotationAssertion(Annotation( "ABA:LT") "lateral terminal nucleus of the accessory optic tract") AnnotationAssertion(Annotation( "FMA:77652") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "nucleus accessorius lateralis tractus optici") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0013600") AnnotationAssertion(rdfs:label "lateral accessory nucleus of optic tract") SubClassOf(Annotation( "FMA"^^xsd:string) ) DisjointClasses(Annotation( "lexical"^^xsd:string) ) # Class: (medial accessory nucleus of optic tract) AnnotationAssertion( ) AnnotationAssertion( "BAMS:MT") AnnotationAssertion( "FMA:77653") AnnotationAssertion( "MBA:58") AnnotationAssertion(Annotation( "ABA:MT") "medial terminal nucleus of the accessory optic tract") AnnotationAssertion(Annotation( "FMA:77653") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "nucleus accessorius medialis tractus optici") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0013601") AnnotationAssertion(rdfs:comment "The medial terminal nucleus is usually very prominent but it is reduced in primates (except, curiously, the tarsier), megachiropterans, Cynocephalus and Bradypus. Metatherians have a large medial terminal nucleus[Pettigrew et al. (1989)]") AnnotationAssertion(rdfs:label "medial accessory nucleus of optic tract") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (layer of lateral geniculate body) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0013605") AnnotationAssertion(rdfs:label "layer of lateral geniculate body") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (magnocellular layer of dorsal nucleus of lateral geniculate body) AnnotationAssertion( "strata magnocellularia") AnnotationAssertion( "DHBA:10431") AnnotationAssertion( "FMA:76989") AnnotationAssertion( "PBA:128013078") AnnotationAssertion( "lateral geniculate nucleus magnocellular layer") AnnotationAssertion( "magnocellular layer of lateral geniculate nucleus") AnnotationAssertion(Annotation( "FMA:76989") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "strata magnocellularia nuclei dorsalis corporis geniculati lateralis") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0013606") AnnotationAssertion(rdfs:comment "Rods; necessary for the perception of movement, depth, and small differences in brightness[WP]") AnnotationAssertion(rdfs:label "magnocellular layer of dorsal nucleus of lateral geniculate body") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (parvocellular layer of dorsal nucleus of lateral geniculate body) AnnotationAssertion( "strata parvocellularia") AnnotationAssertion( "FMA:76992") AnnotationAssertion( "PBA:128013091") AnnotationAssertion( "parvocellular layer of lateral geniculate nucleus") AnnotationAssertion(Annotation( "FMA:76992") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "strata parvocellularia nuclei dorsalis corporis geniculati lateralis") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0013607") AnnotationAssertion(rdfs:comment "Cones; long- and medium-wavelength (\"red\" and \"green\" cones); necessary for the perception of color and form (fine details).[WP]") AnnotationAssertion(rdfs:label "parvocellular layer of dorsal nucleus of lateral geniculate body") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (inferior olive dorsal accessory nucleus) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37612") AnnotationAssertion( "MA:0001042") AnnotationAssertion( "dorsal accessory nucleus of inferior olivary complex") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0013608") AnnotationAssertion(rdfs:label "inferior olive dorsal accessory nucleus") SubClassOf(Annotation( "MA-inferred") ) # Class: (inferior olive medial accessory nucleus) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37613") AnnotationAssertion( "MA:0001044") AnnotationAssertion( "medial accessory nucleus of inferior olivary complex") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0013609") AnnotationAssertion(rdfs:label "inferior olive medial accessory nucleus") SubClassOf(Annotation( "MA-inferred") ) # Class: (inferior olive ventral accessory nucleus) AnnotationAssertion( "ventral accessory nucleus of inferior olivary complex") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0013610") AnnotationAssertion(rdfs:label "inferior olive ventral accessory nucleus") SubClassOf(Annotation( "cjm"^^xsd:string) ) # Class: (lower jaw cingulum) AnnotationAssertion( "cingulid") AnnotationAssertion( "uberon") AnnotationAssertion( "tooth cingulid") AnnotationAssertion( "UBERON:0013612") AnnotationAssertion(rdfs:label "lower jaw cingulum") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (upper jaw cingulum) AnnotationAssertion(Annotation( ) "A ridge that girdles the base of a upper molar tooth") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0013613") AnnotationAssertion(rdfs:label "upper jaw cingulum") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (fasciculus aberans) AnnotationAssertion(Annotation( "MorphoBank:177") "The fasciulus aberrans is a distinct bundle of fibers at the dorsal aspect of the anterior commisure. These fibers travel in the internal capsule between the putamen and caudate nuclei, and cross the midline to connect the dorsal neocortex of the two hemispheres. When the fasciculus aberrans is absent, the fibers connecting the neocortex of the two hemispheres takes a diffderent route through the external capsule[Johnson et al., (1982a, 1982b, 1994)].") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0013614") AnnotationAssertion(rdfs:label "fasciculus aberans") SubClassOf( ) SubClassOf( ) # Class: (koniocellular layer of dorsal nucleus of lateral geniculate body) AnnotationAssertion( "FMA:76988") AnnotationAssertion( "konioocellular layer of lateral geniculate nucleus") AnnotationAssertion(Annotation( "FMA:76988") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "stratum koniocellulare nuclei dorsalis corporis geniculati lateralis") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0013615") AnnotationAssertion(rdfs:comment "Short-wavelength \"blue\" cones.[WP]") AnnotationAssertion(rdfs:label "koniocellular layer of dorsal nucleus of lateral geniculate body") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (primary molar tooth) AnnotationAssertion( "TODO - logical definition") AnnotationAssertion( ) AnnotationAssertion( "FMA:84206") AnnotationAssertion(Annotation( "FMA:84206") "deciduous molar tooth") AnnotationAssertion(Annotation( "FMA:84206") "primary molar tooth") AnnotationAssertion(Annotation( "FMA:84206") "temporary molar tooth") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0013616") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "primary molar tooth") SubClassOf( ) SubClassOf( ) # Class: (upper primary molar tooth) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A primary molar tooth that is part of a upper jaw region.") AnnotationAssertion( ) AnnotationAssertion( "FMA:84210") AnnotationAssertion( "primary upper molar tooth") AnnotationAssertion( "upper deciduous molar") AnnotationAssertion(Annotation( "FMA:84210") "upper deciduous molar tooth") AnnotationAssertion(Annotation( "FMA:84210") "upper primary molar tooth") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0013617") AnnotationAssertion(rdfs:label "upper primary molar tooth") SubClassOf( ) SubClassOf( ) SubClassOf( ) # Class: (secondary molar tooth) AnnotationAssertion( ) AnnotationAssertion( "FMA:84207") AnnotationAssertion(Annotation( "FMA:84207") "permanent molar tooth") AnnotationAssertion(Annotation( "FMA:84207") "secondary molar tooth") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0013618") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "secondary molar tooth") SubClassOf( ) SubClassOf( ) # Class: (upper secondary molar tooth) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A secondary molar tooth that is part of a upper jaw region.") AnnotationAssertion( "FMA:55720") AnnotationAssertion(Annotation( "FMA:55720") "maxillary secondary molar tooth") AnnotationAssertion(Annotation( "FMA:55720") "upper permanent molar tooth") AnnotationAssertion(Annotation( "FMA:55720") "upper secondary molar tooth") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0013619") AnnotationAssertion(rdfs:label "upper secondary molar tooth") SubClassOf( ) SubClassOf( ) SubClassOf( ) # Class: (lower primary molar tooth) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A primary molar tooth that is part of a lower jaw region.") AnnotationAssertion( ) AnnotationAssertion( "FMA:84213") AnnotationAssertion(Annotation( "FMA:84213") "lower deciduous molar tooth") AnnotationAssertion( "primary lower molar tooth") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0013620") AnnotationAssertion(rdfs:label "lower primary molar tooth") SubClassOf( ) SubClassOf( ) SubClassOf( ) # Class: (lower secondary molar tooth) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A secondary molar tooth that is part of a lower jaw region.") AnnotationAssertion( "FMA:55721") AnnotationAssertion( "lower permanent molar") AnnotationAssertion(Annotation( "FMA:55721") "lower permanent molar tooth") AnnotationAssertion(Annotation( "FMA:55721") "mandibular secondary molar tooth") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0013621") AnnotationAssertion(rdfs:label "lower secondary molar tooth") SubClassOf( ) SubClassOf( ) SubClassOf( ) # Class: (manual autopod pad) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An autopod pad that is part of a manus.") AnnotationAssertion( "uberon") AnnotationAssertion( "foot pad of manus") AnnotationAssertion( "manual foot pad") AnnotationAssertion( "UBERON:0013622") AnnotationAssertion(rdfs:label "manual autopod pad") SubClassOf( ) SubClassOf( ) # Class: (pedal autopod pad) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An autopod pad that is part of a pes.") AnnotationAssertion( "uberon") AnnotationAssertion( "foot pad of pes") AnnotationAssertion( "pedal foot pad") AnnotationAssertion( "UBERON:0013623") AnnotationAssertion(rdfs:label "pedal autopod pad") SubClassOf( ) SubClassOf( ) # Class: (medial metatarsal pad) AnnotationAssertion( "thenar pad") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0013626") AnnotationAssertion(rdfs:label "medial metatarsal pad") SubClassOf( ) DisjointClasses(Annotation( "lexical"^^xsd:string) ) # Class: (lateral metatarsal pad) AnnotationAssertion( "hypothenar pad") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0013627") AnnotationAssertion(rdfs:label "lateral metatarsal pad") SubClassOf( ) # Class: (pollical pad) AnnotationAssertion( "interdigital pad 1 of manus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0013628") AnnotationAssertion(rdfs:label "pollical pad") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (hallical pad) AnnotationAssertion( "interdigital pad 1 of pes") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0013629") AnnotationAssertion(rdfs:label "hallical pad") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (short bone) AnnotationAssertion(Annotation( ) "Short bones are designated as those bones that are as wide as they are long. Their primary function is to provide support and stability with little to no movement. They are one of five types of bones: long, short, flat, irregular and sesamoid. Examples of these bones include the tarsals in the foot and the carpals in the hand.") AnnotationAssertion( "TODO - make subclass links") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:7475") AnnotationAssertion( "NCIT:C33545") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0013630") AnnotationAssertion(rdfs:label "short bone") SubClassOf(Annotation( "NCIT") ) # Class: (sesamoid element) AnnotationAssertion(Annotation( "PSPUB:0000169") Annotation( "VSAO:0000137") "Ossicle that develops within bands of dense, regular connective tissue (e.g., tendons and ligaments). Sesamoids are generally located proximate to a bony prominence, over which the dense regular connective tissue wraps, and/or a joint or articulation.") AnnotationAssertion( "VSAO:0000137") AnnotationAssertion(Annotation( "VSAO:0000137") "sesamoid") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0013631") AnnotationAssertion(rdfs:comment "Sesamoids are often endochondral replacement elements and in addition to bone tissue, may also be composed of articular cartilage, fibrocartilage, hyaline cartilage, and calcified cartilage.") AnnotationAssertion(rdfs:label "sesamoid element") SubClassOf(Annotation( "VSAO"^^xsd:string) ) SubClassOf(Annotation( "VSAO"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (sesamoid cartilage) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A sesamoid element that is composed primarily of cartilage tissue.") AnnotationAssertion( "FMA:55379") AnnotationAssertion(Annotation( "FMA:55379") "cartilago sesamoidea") AnnotationAssertion(Annotation( "FMA:55379") "sesamoid cartilage of cricopharyngeal ligament") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0013632") AnnotationAssertion(rdfs:label "sesamoid cartilage") SubClassOf( ) SubClassOf( ) # Class: (intertrochanteric crest) AnnotationAssertion(Annotation( ) "The intertrochanteric crest is a bony ridge located on the posterior side of the head of the femur, stretching obliquely downward and medially from the summit of the greater trochanter to the lesser trochanter.") AnnotationAssertion( ) AnnotationAssertion( "FMA:75100") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0013633") AnnotationAssertion(rdfs:comment "Together with the intertrochanteric line on the anterior side of the head, the crest mark the transition between of the neck of femur into the shaft of femur. An elevation between the middle and proximal third of the crest is known as the quadrate tubercle. The upper half of the crest forms the posterior border of the greater trochanter. The distal capsular attachment on the femur follows the shape of the irregular rim between the head and the neck. As a consequence, the capsule of the hip joint attaches in the region of the intertrochanteric line on the anterior side, but a finger away from the intertrochanteric crest on the posterior side of the head") AnnotationAssertion(rdfs:label "intertrochanteric crest") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (intertrochanteric line) AnnotationAssertion(Annotation( ) "The intertrochanteric line (or spiral line of the femur) is a line located on the anterior side of the proximal end of the femur that stretches between the lesser trochanter and the greater trochanter forming the base of the neck of the femur, roughly following the direction of the shaft of the femur.") AnnotationAssertion( ) AnnotationAssertion( "FMA:74587") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0013634") AnnotationAssertion(rdfs:label "intertrochanteric line") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (sphincter colli muscle) AnnotationAssertion(Annotation( "MorphoBank") "The m. sphincter in the head region can be divided into 2 layers: M. sphincter colli profundus and superficialis; in studied placentals, the deepest layer has circular fibers, while the superficial layer has oblique and longitudinal fibers. In non-mammalian vertebrates (if differentiated) and in monotremes both the superficialis and the profundus layers are circular ('sphincter') muscles (Shumacher, 1956; Saban, 1971).") AnnotationAssertion( "sphincter colli") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0013635") AnnotationAssertion(rdfs:label "sphincter colli muscle") SubClassOf( ) # Class: (epithelium of intestinal villus) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An epithelium that is part of a intestinal villus.") AnnotationAssertion( "FMA:63587") AnnotationAssertion(Annotation( "FMA:63587") "intestinal villus epithelium") AnnotationAssertion( "uberon") AnnotationAssertion( "villous epithelium") AnnotationAssertion( "villus epithelium") AnnotationAssertion( "UBERON:0013636") AnnotationAssertion(rdfs:label "epithelium of intestinal villus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (prostate gland lateral lobe) AnnotationAssertion(Annotation( "ncithesaurus:Lateral_Lobe_of_the_Prostate") "The prostate gland lobe that is located on the lateral side of the organ.") AnnotationAssertion( "https://github.com/obophenotype/uberon/wiki/Modeling-paired-structures-Design-Pattern"^^xsd:anyURI) AnnotationAssertion( "EMAPA:29822") AnnotationAssertion( "FMA:19577") AnnotationAssertion( "MA:0003125") AnnotationAssertion( "NCIT:C13092") AnnotationAssertion(Annotation( "FMA:19577") "lateral lobe of prostate") AnnotationAssertion(Annotation( "FMA:19577") "lateral lobe of prostate gland") AnnotationAssertion( "uberon") AnnotationAssertion( "lateral prostate") AnnotationAssertion(Annotation( "MorphoBank:MorphoBank") "lateral ventral lobe of prostate gland") AnnotationAssertion( "UBERON:0013637") AnnotationAssertion(rdfs:label "prostate gland lateral lobe") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (horny papilla of tongue) AnnotationAssertion( "In carnivores, functions to hold on to meat as it is being cut by the teeth") AnnotationAssertion( "horny papilla") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "horny papillae") AnnotationAssertion( "UBERON:0013638") AnnotationAssertion(rdfs:label "horny papilla of tongue") SubClassOf( ) # Class: (mechanical papilla of tongue) AnnotationAssertion( "mechanical papilla") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "mechanical papillae") AnnotationAssertion( "UBERON:0013639") AnnotationAssertion(rdfs:label "mechanical papilla of tongue") SubClassOf( ) # Class: (internal cheek pouch) AnnotationAssertion( "internal buccal pouch") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0013640") AnnotationAssertion(rdfs:comment "Lined with oral epithelium") AnnotationAssertion(rdfs:label "internal cheek pouch") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (external cheek pouch) AnnotationAssertion( "external buccal pouch") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0013641") AnnotationAssertion(rdfs:comment "may be lined with fur") AnnotationAssertion(rdfs:label "external cheek pouch") SubClassOf( ) # Class: (duodenal ampulla) AnnotationAssertion(Annotation( ) "The very first part of the duodenum which is slightly dilated.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:14927") AnnotationAssertion(Annotation( "FMA:14927") "ampulla (duodenum)") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) "ampulla duodeni") AnnotationAssertion(Annotation( "FMA:14927") "ampulla of duodenum") AnnotationAssertion(Annotation( "FMA:14927") "bulbus (duodenum)") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) "bulbus duodeni") AnnotationAssertion(Annotation( "FMA:14927") "duodenal cap") AnnotationAssertion(Annotation( "FMA:14927") "duodenal cap viewed radiologically") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0013644") AnnotationAssertion(rdfs:label "duodenal ampulla") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (gular gland) AnnotationAssertion(Annotation( ) "A gland that is part of the gular region (throat).") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0013645") AnnotationAssertion(rdfs:label "gular gland") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (buccal nerve) AnnotationAssertion(Annotation( ) "The buccal nerve (also called the long buccal nerve) is a nerve in the face. It is a branch of the mandibular nerve (which is itself a branch of the trigeminal nerve) and transmits sensory information from skin over the buccal membrane (in general, the cheek) and from the second and third molar teeth.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:bucn") AnnotationAssertion( "FMA:53066") AnnotationAssertion(Annotation( "FMA:53066") "buccinator nerve") AnnotationAssertion(Annotation( "FMA:53066") "long buccal nerve") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "buccinator branch") AnnotationAssertion(Annotation( ) "long buccal nerve") AnnotationAssertion( "UBERON:0013646") AnnotationAssertion(rdfs:label "buccal nerve") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (lateral pterygoid nerve) AnnotationAssertion(Annotation( "UBERON:cjm"^^xsd:string) "A nerve that innervates the lateral pterygoid muscle.") AnnotationAssertion(Annotation( ) "The nerve to the Pterygoideus externus frequently arises in conjunction with the buccinator nerve, but it may be given off separately from the anterior division of the mandibular nerve. It enters the deep surface of the muscle.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:53107") AnnotationAssertion(Annotation( "FMA:53107") "branch of buccal nerve to lateral pterygoid") AnnotationAssertion(Annotation( "FMA:53107") "nerve to lateral pterygoid") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) "nervus pterygoideus lateralis") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "external pterygoid nerve") AnnotationAssertion( "UBERON:0013647") AnnotationAssertion(rdfs:label "lateral pterygoid nerve") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (masseteric artery) AnnotationAssertion(Annotation( ) "The masseteric artery is small and passes laterally through the mandibular notch to the deep surface of the masseter muscle, which it supplies. It anastomoses with the masseteric branches of the external maxillary artery and with the transverse facial artery.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:49739") AnnotationAssertion( "NCIT:C53052") AnnotationAssertion(Annotation( "ncithesaurus:Masseteric_Artery") "UMLS:C0226149") AnnotationAssertion(Annotation( ) Annotation( ) "arteria masseterica") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0013648") AnnotationAssertion(rdfs:label "masseteric artery") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (fused tarsal bones 1 and 2) AnnotationAssertion(Annotation( "UBERON:skansa") "A tarsal bone that is formed from the fusion of the 1st and 2nd tarsal bones.") AnnotationAssertion( ) AnnotationAssertion( "fused tarsals 1 and 2") AnnotationAssertion(Annotation( "NominaAnatomicaVeterinaria:2005"^^xsd:string) Annotation( ) "os cuneiforme mediointermedium") AnnotationAssertion(Annotation( "NominaAnatomicaVeterinaria:2005"^^xsd:string) Annotation( ) "os tarsale I et II") AnnotationAssertion( "uberon") AnnotationAssertion( "tarsals 1+2") AnnotationAssertion( "UBERON:0013649") AnnotationAssertion(rdfs:label "fused tarsal bones 1 and 2") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (elastica externa of notochord) AnnotationAssertion(Annotation( "XAO:0001020") "Notochordal membrane covering derived from notochordal epithelium. Its first indication is at NF stage 24, and it is a distinct membrane by NF stage 28[XAO:0001020].") AnnotationAssertion(Annotation( ) "The notochordal sheath in amphioxus has a complex three-layered organization with the outer, middle and inner layer The outer and middle layer are composed of collagen fibers of different thickness and course, that correspond to collagen type I and collagen type III in vertebrates, respectively, and the inner layer is amorphous, resembles basal lamina, and is closely attached to the notochord by hemidesmosome junctions.") AnnotationAssertion( "XAO:0001020") AnnotationAssertion(Annotation( "XAO:0001020") "elastica externa") AnnotationAssertion( "membrana elastica externa") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "XAO:0001020") "notochordal sheath") AnnotationAssertion( "UBERON:0013655") AnnotationAssertion(rdfs:label "elastica externa of notochord") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (anatomical line between inner canthi) AnnotationAssertion(Annotation( ) "An anatomical line of the face that connects the two inner (medial) canthi of the eye. The length of this line is known as the inter canthal distance.") AnnotationAssertion( "inter-canthal line") AnnotationAssertion( "intercanthal line") AnnotationAssertion( "FMA:284806") AnnotationAssertion( "inter inner canthal line") AnnotationAssertion( "inter medial canthal line") AnnotationAssertion( "uberon") AnnotationAssertion( "bicanthal plane") AnnotationAssertion( "UBERON:0013678") AnnotationAssertion(rdfs:label "anatomical line between inner canthi") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (inner canthus of right eye) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An inner canthus that is part of a right eye.") AnnotationAssertion( "FMA:59319") AnnotationAssertion( "right inner canthus") AnnotationAssertion( "right medial canthus") AnnotationAssertion(Annotation( "FMA:59319") "right medial palpebral commissure") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:59319") "medial angle of right eye") AnnotationAssertion(Annotation( "FMA:59319") "medial canthus of right eye") AnnotationAssertion( "UBERON:0013679") AnnotationAssertion(rdfs:label "inner canthus of right eye") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (inner canthus of left eye) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An inner canthus that is part of a left eye.") AnnotationAssertion( "FMA:59320") AnnotationAssertion( "left inner canthus") AnnotationAssertion( "left medial canthus") AnnotationAssertion(Annotation( "FMA:59320") "left medial palpebral commissure") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:59320") "medial angle of left eye") AnnotationAssertion(Annotation( "FMA:59320") "medial canthus of left eye") AnnotationAssertion( "UBERON:0013680") AnnotationAssertion(rdfs:label "inner canthus of left eye") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (peripheral region of retina) AnnotationAssertion(Annotation( ) Annotation( ) Annotation( ) Annotation( "XAO:0004458") "Region of retina that extends from central retina to ora serrata. Peripheral retina is dominated by rods and also has less ganglion cells and is not as thick as central retina. It is responsible for peripheral and night vision.") AnnotationAssertion(Annotation( "XAO:0004458") "Anatomical region comprising the peripheral part of the retina[XAO:0004458].") AnnotationAssertion( ) AnnotationAssertion( "XAO:0004458") AnnotationAssertion(Annotation( "XAO:0004458") "peripheral retina") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0013682") AnnotationAssertion(rdfs:label "peripheral region of retina") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (left dorsal thalamus) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A dorsal thalamus that is in_the_left_side_of a diencephalon.") AnnotationAssertion( "https://github.com/obophenotype/uberon/wiki/Modeling-paired-structures-Design-Pattern"^^xsd:anyURI) AnnotationAssertion(Annotation( "FMA:258716") "left thalamus") AnnotationAssertion( "FMA:258716") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0013683") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "left dorsal thalamus") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (right dorsal thalamus) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A dorsal thalamus that is in_the_right_side_of a diencephalon.") AnnotationAssertion( "https://github.com/obophenotype/uberon/wiki/Modeling-paired-structures-Design-Pattern"^^xsd:anyURI) AnnotationAssertion(Annotation( "FMA:258714") "right thalamus") AnnotationAssertion( "FMA:258714") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0013684") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "right dorsal thalamus") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (foramen of skull) AnnotationAssertion(Annotation( ) Annotation( "TAO:curator") "Anatomical space that is an opening in a bone of the skull.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:53165") AnnotationAssertion(Annotation( ) "foramen of skull") AnnotationAssertion(Annotation( "FMA:53165") "cranial conduit") AnnotationAssertion( "cranial foramen") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "foramina of the skull") AnnotationAssertion( "UBERON:0013685") AnnotationAssertion(rdfs:label "foramen of skull") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (anatomical conduit space) AnnotationAssertion(Annotation( ) Annotation( "FMA:9338") "An anatomical space which is the lumen of some anatomical conduit and connects two or more spaces together[FMA,modified].") AnnotationAssertion( "FMA:9338") AnnotationAssertion( "foramen space") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0013686") AnnotationAssertion(rdfs:label "anatomical conduit space") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ObjectIntersectionOf(ObjectMinCardinality(2 ) ObjectMaxCardinality(2 ))) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pericranium) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "Periosteum that is part of a skull.") AnnotationAssertion( "FMA:76623") AnnotationAssertion(Annotation( "FMA:76623") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "periosteum externum cranii") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0013687") AnnotationAssertion(rdfs:label "pericranium") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (tonsil germinal center) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A germinal center that is part of a tonsil.") AnnotationAssertion( "consider adding related terms, e.g. secondary lymphoid tissue of tonsil") AnnotationAssertion(Annotation( "TS-1288") "The germinal center or reaction center is the activated center of a lymphoid follicle in secondary lymphoid tissue where B-lymphocytes are stimulated by antigens and helper T cells (T-lymphocytes, helper-inducer) are stimulated to generate memory cells. Here, the germinal center of a tonsil[TS-1288].") AnnotationAssertion( "CALOHA:TS-1288") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "CALOHA:TS-1288") "tonsil reaction center") AnnotationAssertion( "UBERON:0013688") AnnotationAssertion(rdfs:label "tonsil germinal center") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (appendix lymphoid tissue) AnnotationAssertion(Annotation( "CALOHA:TS-1268") "Lymphoid tissue located in the appendix.") AnnotationAssertion( "CALOHA:TS-1268") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "lymphatic tissue of appendix") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "lymphatic tissue of vermiform appendix") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "CALOHA:TS-1268") "appendix lymphoid") AnnotationAssertion( "UBERON:0013689") AnnotationAssertion(rdfs:label "appendix lymphoid tissue") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (buttock) AnnotationAssertion(Annotation( ) Annotation( ) "A zone of soft tissue located on the posterior of the lateral side of the pelvic region corresponding to the gluteal muscles.") AnnotationAssertion( "gluteal") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "CALOHA:TS-2224") AnnotationAssertion( "EFO:0003070") AnnotationAssertion( "FMA:25245") AnnotationAssertion( "MESH:D002081") AnnotationAssertion( "NCIT:C89806") AnnotationAssertion(Annotation( "ncithesaurus:Buttock") "UMLS:C0006497") AnnotationAssertion(Annotation( "FMA:25245") "clunis") AnnotationAssertion(Annotation( "FMA:25245") "gluteal part of pelvic girdle") AnnotationAssertion(Annotation( "FMA:25245") "gluteal region") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) Annotation( ) "regio glutealis") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "buttocks") AnnotationAssertion( "UBERON:0013691") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "buttock") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (inframammary fold) AnnotationAssertion(Annotation( "CALOHA:TS-2350") "Inframammary fold, inframammary crease or inframammary line is the feature of human anatomy which is a natural boundary of a breast from below, the place where the breast and the chest meet. The choice of the term depends on the prominence of the feature.") AnnotationAssertion( "CALOHA:TS-2350") AnnotationAssertion( "FMA:62109") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "CALOHA:TS-2350") "inframammary breast") AnnotationAssertion(Annotation( "CALOHA:TS-2350") "inframammary crease") AnnotationAssertion( "UBERON:0013692") AnnotationAssertion(rdfs:label "inframammary fold") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (cerebral cortex neuropil) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A neuropil that is part of a cerebral cortex [Automatically generated definition].") AnnotationAssertion( "CALOHA:TS-2396") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "neuropil of cerebral cortex") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0013693") AnnotationAssertion(rdfs:label "cerebral cortex neuropil") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (brain endothelium) AnnotationAssertion(Annotation( "CALOHA:TS-0092") "Vascular endothelium found in blood vessels of the blood-brain-barrier.") AnnotationAssertion( "BTO:0001852") AnnotationAssertion( "BTO:0003248") AnnotationAssertion( "CALOHA:TS-0092") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "CALOHA:TS-0092") "cerebromicrovascular endothelium") AnnotationAssertion( "UBERON:0013694") AnnotationAssertion(rdfs:label "brain endothelium") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (colon endothelium) AnnotationAssertion(Annotation( "CALOHA:TS-0162") "Vascular endothelium found in colon blood vessels.") AnnotationAssertion( "CALOHA:TS-0162") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "CALOHA:TS-0162") "colon endothelial cell") AnnotationAssertion(Annotation( "CALOHA:TS-0162") "colon endothelial cells") AnnotationAssertion(Annotation( "CALOHA:TS-0162") "colonic endothelial cell") AnnotationAssertion(Annotation( "CALOHA:TS-0162") "colonic endothelium") AnnotationAssertion(Annotation( "CALOHA:TS-0162") "colorectal endothelial cell") AnnotationAssertion(Annotation( "CALOHA:TS-0162") "colorectal endothelium") AnnotationAssertion( "UBERON:0013695") AnnotationAssertion(rdfs:label "colon endothelium") SubClassOf( ) SubClassOf( ) # Class: (tonsil epithelium) AnnotationAssertion(Annotation( "CALOHA:TS-2070") "The epithelium that forms the surface of the tonsil dips into the underlying connective tissue in numerous places, forming crypts kown as tonsillar crypts. Stratified squamous epithelium, that may be heavily infiltrated by lymphocytes. Epithelial cells are present in the germinal as well as in the periphery of the nodule.") AnnotationAssertion( "CALOHA:TS-2070") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "CALOHA:TS-2070") "epithelium of tonsil") AnnotationAssertion(Annotation( "CALOHA:TS-2070") "tonsil epithelial cell") AnnotationAssertion( "UBERON:0013696") AnnotationAssertion(rdfs:label "tonsil epithelium") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (exocrine pancreas epithelium) AnnotationAssertion(Annotation( "CALOHA:TS-2108") "Epithelium lining the exocrine pancreas.") AnnotationAssertion( "CALOHA:TS-2108") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "CALOHA:TS-2108") "epithelium of exocrine pancreas") AnnotationAssertion(Annotation( "CALOHA:TS-2108") "exocrine pancreas epithelial cell") AnnotationAssertion( "UBERON:0013697") AnnotationAssertion(rdfs:label "exocrine pancreas epithelium") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (strand of pubic hair) AnnotationAssertion(Annotation( ) "A hair in the frontal genital area of adolescent and adult humans, located on and around the sex organs, the crotch, and sometimes at the top of the inside of the thighs, in the pubic region around the pubis bone.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:54319") AnnotationAssertion( "NCIT:C33424") AnnotationAssertion(Annotation( "ncithesaurus:Pubic_Hair") "UMLS:C1305636") AnnotationAssertion(Annotation( "FMA:54319") "pubic hair") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0013698") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "strand of pubic hair") SubClassOf( ) # Class: (strand of axillary hair) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A strand of hair that is part of a axilla.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:54253") AnnotationAssertion( "axilla hair") AnnotationAssertion(Annotation( "FMA:54253") "axillary hair") AnnotationAssertion(Annotation( "FMA:54253") "hair of axilla") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0013699") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "strand of axillary hair") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (axial musculature) AnnotationAssertion(Annotation( "HP:0003327") "Musculature of the head and neck, spine, and ribs.") AnnotationAssertion( "EHDAA2:0000159") AnnotationAssertion( "EMAPA:18166") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0013700") AnnotationAssertion(rdfs:label "axial musculature") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (main body axis) AnnotationAssertion(Annotation( ) "A principle subdivision of an organism that includes all structures along the primary axis, typically the anterior-posterior axis, from head to tail, including structures of the body proper where present (for example, ribs), but excluding appendages.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0013701") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "main body axis") SubClassOf( ) # Class: (body proper) AnnotationAssertion(Annotation( "AEO:0000103") "The region of the organism associated with the visceral organs.") AnnotationAssertion(Annotation( "FMA:231424") "Cardinal body part, which consists of a maximal set of diverse subclasses of organ and organ part spatially associated with the vertebral column and ribcage. Examples: There is only one body proper[FMA:231424].") AnnotationAssertion( "AEO:0000103") AnnotationAssertion( "BTO:0001489") AnnotationAssertion( "EMAPA:36031") AnnotationAssertion( "FMA:231424") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "AEO:0000103") "body") AnnotationAssertion(Annotation( "BTO:0001489") "whole body") AnnotationAssertion( "UBERON:0013702") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "body proper") SubClassOf(Annotation( "AEO"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (integumentary projection) AnnotationAssertion(Annotation( ) "Anatomical projection that is part of the integumentl system.") AnnotationAssertion( "skin projection") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0013703") AnnotationAssertion(rdfs:label "integumentary projection") SubClassOf( ) SubClassOf( ) # Class: (notochordal canal) AnnotationAssertion(Annotation( ) "A tubular passage that extends from the primitive pit into the head process during the early stages of embryonic development in mammals. It perforates the splanchnopleure layer so that the yolk sac and the amnion are connected temporarily.") AnnotationAssertion( ) AnnotationAssertion( "FMA:293127") AnnotationAssertion( "NCIT:C34230") AnnotationAssertion(Annotation( "ncithesaurus:Notochordal_Canal") "UMLS:C1518428") AnnotationAssertion( "uberon") AnnotationAssertion( "chordal canal") AnnotationAssertion( "UBERON:0013704") AnnotationAssertion(rdfs:label "notochordal canal") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (fascia of Scarpa) AnnotationAssertion(Annotation( ) "The deep layer (fascia of Scarpa) is a layer of the anterior abdominal wall.") AnnotationAssertion( ) AnnotationAssertion( "FMA:19923") AnnotationAssertion(Annotation( "FMA:19923") "Colles' fascia") AnnotationAssertion(Annotation( "FMA:19923") "Scarpa's fascia") AnnotationAssertion(Annotation( "FMA:19923") "deep layer of superficial fascia of abdomen") AnnotationAssertion(Annotation( "FMA:19923") "membranous layer of subcutaneous tissue of abdomen") AnnotationAssertion(Annotation( "FMA:19923") "membranous layer of superficial fascia of abdomen") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) "stratum membranosum telae subcutaneae abdominis") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:19923") "Colles fascia") AnnotationAssertion(Annotation( ) "Scarpa's fascia") AnnotationAssertion(Annotation( ) "fascia of Scarpa") AnnotationAssertion( "UBERON:0013705") AnnotationAssertion(rdfs:label "fascia of Scarpa") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (bone spine) AnnotationAssertion( "FMA:82508") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0013706") AnnotationAssertion(rdfs:label "bone spine") SubClassOf(Annotation( "cjm"^^xsd:string) ) # Class: (iliac spine) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A bone spine that is part of a ilium.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:82509") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0013707") AnnotationAssertion(rdfs:label "iliac spine") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (anterior superior iliac spine) AnnotationAssertion(Annotation( ) "The anterior superior iliac spine (ASIS) is an important landmark of surface anatomy. It refers to the anterior extremity of the iliac crest of the pelvis, which provides attachment for the inguinal ligament, the sartorius muscle, and the tensor fasciae latae. ASIS provides a clue in identifying some other clinical landmarks, including: McBurney's point Gardner's line Roser-NC)laton line A - Anterior (front, like the face) S - Superior (towards the head, opposite to feet) I - Iliac S - Spine.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:49465") AnnotationAssertion(Annotation( "FMA:49465") "anterior superior iliac spine (volume)") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "anterior superior iliac spine") AnnotationAssertion(Annotation( ) "anterior superior spine") AnnotationAssertion( "UBERON:0013708") AnnotationAssertion(rdfs:label "anterior superior iliac spine") SubClassOf( ) DisjointClasses(Annotation( "lexical"^^xsd:string) ) # Class: (anterior inferior iliac spine) AnnotationAssertion(Annotation( ) "The anterior inferior iliac spine (AIIS) is a bony eminence on the anterior border of the hip bone, or, more precisely, the wing of the ilium (i.e. the upper lateral parts of the pelvis).") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:63614") AnnotationAssertion(Annotation( "FMA:63614") "anterior inferior iliac spine (volume)") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "anterior inferior spine") AnnotationAssertion( "UBERON:0013709") AnnotationAssertion(rdfs:label "anterior inferior iliac spine") SubClassOf( ) DisjointClasses(Annotation( "lexical"^^xsd:string) ) # Class: (posterior superior iliac spine) AnnotationAssertion(Annotation( ) "The posterior border of the ala, shorter than the anterior, also presents two projections separated by a notch, the posterior superior iliac spine and the posterior inferior iliac spine. The posterior superior iliac spine serves for the attachment of the oblique portion of the posterior sacroiliac ligaments and the Multifidus.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:49468") AnnotationAssertion(Annotation( "FMA:49468") "posterior superior iliac spine (volume)") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "posterior superior spine of the ilium") AnnotationAssertion( "UBERON:0013710") AnnotationAssertion(rdfs:label "posterior superior iliac spine") SubClassOf( ) # Class: (posterior inferior iliac spine) AnnotationAssertion(Annotation( ) "The posterior border of the ala, shorter than the anterior, also presents two projections separated by a notch, the posterior superior iliac spine and the posterior inferior iliac spine. The posterior inferior iliac spine corresponds with the posterior extremity of the auricular surface.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:63615") AnnotationAssertion(Annotation( "FMA:63615") "posterior inferior iliac spine (volume)") AnnotationAssertion( "uberon") AnnotationAssertion( "posterior inferior spine of the ilium") AnnotationAssertion( "UBERON:0013711") AnnotationAssertion(rdfs:label "posterior inferior iliac spine") SubClassOf( ) # Class: (anterior iliac spine) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0013712") AnnotationAssertion(rdfs:label "anterior iliac spine") SubClassOf( ) DisjointClasses(Annotation( "lexical"^^xsd:string) ) # Class: (posterior iliac spine) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0013713") AnnotationAssertion(rdfs:label "posterior iliac spine") SubClassOf( ) # Class: (superficial inguinal ring) AnnotationAssertion(Annotation( ) "The exit of the inguinal canal.") AnnotationAssertion(Annotation( ) "The superficial inguinal ring is an anatomical structure in the anterior wall of the human abdomen. It is a triangular opening that forms the exit of the inguinal canal, which houses the ilioinguinal nerve, the genital branch of the genitofemoral nerve, and the spermatic cord (in men) or the round ligament (in women). At the other end of the canal, the deep inguinal ring forms the entrance. It is also called the subcutaneous inguinal ring or external inguinal ring. It is found within the aponeurosis of the external oblique, immediately above the crest of the pubis, 1 centimeter above and lateral to the pubic tubercle. It has medial and lateral crura. It is at the layer of the aponeurosis of the obliquus externus abdominis[Wikipedia:Superficial_inguinal_ring].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:19926") AnnotationAssertion( "NCIT:C32547") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "cutaneous inguinal ring") AnnotationAssertion(Annotation( ) "external abdominal ring") AnnotationAssertion(Annotation( ) "external inguinal ring") AnnotationAssertion(Annotation( ) "external ring") AnnotationAssertion(Annotation( ) "subcutaneous inguinal ring") AnnotationAssertion( "UBERON:0013717") AnnotationAssertion(rdfs:label "superficial inguinal ring") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (dartos muscle) AnnotationAssertion(Annotation( ) "The dartos fascia is a fat-free layer of smooth muscular fiber outside the external spermatic fascia but below the skin. It is a continuation of Scarpa's Fascia which is a membranous layer of the subcutaneous tissue in the abdominal wall.") AnnotationAssertion( "dartoic") AnnotationAssertion( "dartoid") AnnotationAssertion( ) AnnotationAssertion( "FMA:18088") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "dartos muscle") AnnotationAssertion(Annotation( ) "dartos tunic") AnnotationAssertion(Annotation( ) Annotation( ) "tunica dartos") AnnotationAssertion( "UBERON:0013718") AnnotationAssertion(rdfs:label "dartos muscle") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (dartos muscle of scrotum) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A dartos muscle that is part of a male reproductive system.") AnnotationAssertion(Annotation( "WP"^^xsd:string) "The tunica dartos acts to regulate the temperature of the testicles, which promotes spermatogenesis. It does this by expanding or contracting to wrinkle the scrotal skin. The wrinkled (rugose) appearance of the scrotum is due to this layer of fascia") AnnotationAssertion(Annotation( "FMA"^^xsd:string) "the FMA class appears to belong here due to its synonyms.") AnnotationAssertion( ) AnnotationAssertion( "FMA:27647") AnnotationAssertion( "dartos layer of scrotum") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "dartos tunic") AnnotationAssertion( "UBERON:0013719") AnnotationAssertion(rdfs:label "dartos muscle of scrotum") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (dartos muscle of labia majora) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A dartos muscle that is part of a female reproductive system.") AnnotationAssertion( "dartos layer of labia") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "dartos muliebris") AnnotationAssertion( "UBERON:0013720") AnnotationAssertion(rdfs:label "dartos muscle of labia majora") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (deep inguinal ring) AnnotationAssertion(Annotation( ) "The entrance to the inguinal canal.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:19927") AnnotationAssertion( "NCIT:C32832") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "abdominal inguinal ring") AnnotationAssertion(Annotation( ) Annotation( ) "annulus inguinalis profundus") AnnotationAssertion(Annotation( ) "internal abdominal ring") AnnotationAssertion(Annotation( ) "internal inguinal ring") AnnotationAssertion(Annotation( ) "internal ring") AnnotationAssertion( "UBERON:0013721") AnnotationAssertion(rdfs:label "deep inguinal ring") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (anterior talofibular ligament) AnnotationAssertion(Annotation( ) "The anterior talofibular ligament is a ligament in the ankle. It passes from the anterior margin of the fibular malleolus, anteriorly and medially, to the talus bone, in front of its lateral articular facet. It is one of the lateral ligaments of the ankle and prevents the foot from sliding forward in relation to the shin.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:44083") AnnotationAssertion(Annotation( ) Annotation( ) "ligamentum talofibulare anterius") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0013725") AnnotationAssertion(rdfs:label "anterior talofibular ligament") SubClassOf(Annotation( "FMA"^^xsd:string) ) DisjointClasses(Annotation( "lexical"^^xsd:string) ) # Class: (posterior talofibular ligament) AnnotationAssertion(Annotation( ) "The posterior talofibular ligament, runs almost horizontally from the depression at the medial and back part of the fibular malleolus (lateral malleolus) to a prominent tubercle on the posterior surface of the talus immediately lateral to the groove for the tendon of the flexor hallucis longus.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:44084") AnnotationAssertion(Annotation( ) Annotation( ) "ligamentum talofibulare posterius") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0013726") AnnotationAssertion(rdfs:label "posterior talofibular ligament") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (vestibule of nasal cavity) AnnotationAssertion(Annotation( "AAO:0000984") Annotation( "AAO:EJS"^^xsd:string) "A tube leading from the external naris to the nasal cavity.") AnnotationAssertion( "AAO:0000984") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0013732") AnnotationAssertion(rdfs:label "vestibule of nasal cavity") SubClassOf( ) SubClassOf(Annotation( "AAO"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (caudal linear nucleus) AnnotationAssertion( "FMA:231003") AnnotationAssertion( "HBA:9470") AnnotationAssertion(Annotation( ) Annotation( ) "CLi") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "posterior linear nucleus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0013733") AnnotationAssertion(rdfs:label "caudal linear nucleus") SubClassOf(Annotation( "FMA"^^xsd:string) ) DisjointClasses(Annotation( "lexical"^^xsd:string) ) # Class: (rostral linear nucleus) AnnotationAssertion(Annotation( "NLX:144319") "Nucleus of the medial ventral tegmental area, originally identified in the rat but also in cat, monkey and human, comprising an average of 7% volume of the VTA across the different species, with the largest being present in the cat.") AnnotationAssertion( "Brain Info does not list the linear nuclei as part of the ventral tegmental area but as a co-area of the midbrain tegmentum. Am assuming the rostral linear nucleus of the raphe is synonymous, but needs further review. (NIF)") AnnotationAssertion( ) AnnotationAssertion( "BAMS:LR") AnnotationAssertion( "DHBA:12234") AnnotationAssertion( "DMBA:16748") AnnotationAssertion( "HBA:9471") AnnotationAssertion( "MBA:197") AnnotationAssertion( "NLX:144319") AnnotationAssertion(Annotation( ) Annotation( ) "RLi") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "anterior linear nucleus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "rostral linear nucleus of the raphe") AnnotationAssertion( "UBERON:0013734") AnnotationAssertion(rdfs:label "rostral linear nucleus") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "NIFSTD"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (interfascicular linear nucleus) AnnotationAssertion( "DHBA:12262") AnnotationAssertion( "FMA:77503") AnnotationAssertion( "HBA:9472") AnnotationAssertion( "MBA:12") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "IF") AnnotationAssertion( "central linear nucleus") AnnotationAssertion(Annotation( "FMA:77503") "intermediate linear nucleus") AnnotationAssertion( "UBERON:0013736") AnnotationAssertion(rdfs:label "interfascicular linear nucleus") SubClassOf( ) # Class: (paranigral nucleus) AnnotationAssertion(Annotation( ) Annotation( ) "PN") AnnotationAssertion( ) AnnotationAssertion( "DHBA:12265") AnnotationAssertion( "FMA:77497") AnnotationAssertion( "HBA:9474") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0013737") AnnotationAssertion(rdfs:label "paranigral nucleus") SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (parabrachial pigmental nucleus) AnnotationAssertion(Annotation( "NLX:144307") "Nucleus identified in the medial ventral tegmental area that borders the red nucleus and superior cerebellar peduncle dorsally, the medial lemniscus laterally, the subtantia nigra pars compacta and paranigral nucleus ventrally and the rostral linear nucleus and interfascicular nucleus medially. Generally, the largest nucleus in the ventral tegmental area, occupying an average of 50% of the total volume as measured in rat, cat, monkey and human.") AnnotationAssertion(Annotation( ) Annotation( ) "PBP") AnnotationAssertion( ) AnnotationAssertion( "BAMS:PBP") AnnotationAssertion( "DHBA:12263") AnnotationAssertion( "FMA:77496") AnnotationAssertion( "HBA:9473") AnnotationAssertion( "NLX:144307") AnnotationAssertion(Annotation( "NLX:144307") "parabrachial pigmented nucleus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0013738") AnnotationAssertion(rdfs:label "parabrachial pigmental nucleus") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (base of crypt of Lieberkuhn) AnnotationAssertion(Annotation( ) Annotation( "UBERON:md") "The basal portion (further from lumen) of an intestinal crypt. Contains multipotent stem cells. Stem cells in the crypts divide to form daughter cells. One daughter cell from each stem cell division is retained as a stem cell. The other becomes committed to differentiate along one of four pathways to become an enterocyte, enteroendocrine cell, goblet cell or Paneth cell.") AnnotationAssertion(Annotation( "ISBN:9780521617147") "Clearly defined prolifieration zones found in mammals. Not observed in agnathostomes, larval amphibians. Described in advanced species of fish and adult amphibians.") AnnotationAssertion( "basal portion of intestinal gland") AnnotationAssertion( "base of intestinal gland") AnnotationAssertion( "base part of epithelium of intestinal gland") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0013739") AnnotationAssertion(rdfs:label "base of crypt of Lieberkuhn") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (wall of crypt of Lieberkuhn) AnnotationAssertion(Annotation( ) Annotation( "UBERON:md") "The lateral parts of an intestinal crypt, continuous distally with the base and proximally with the intestinal villus epithelium.") AnnotationAssertion( "wall of intestinal gland") AnnotationAssertion( "wall part of epithelium of intestinal gland") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0013740") AnnotationAssertion(rdfs:label "wall of crypt of Lieberkuhn") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (base of crypt of Lieberkuhn of large intestine) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A base of crypt of Lieberkuhn that is part of a large intestine.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0013741") AnnotationAssertion(rdfs:label "base of crypt of Lieberkuhn of large intestine") SubClassOf( ) SubClassOf( ) # Class: (wall of crypt of Lieberkuhn of large intestine) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A wall of crypt of Lieberkuhn that is part of a large intestine.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0013742") AnnotationAssertion(rdfs:label "wall of crypt of Lieberkuhn of large intestine") SubClassOf( ) SubClassOf( ) # Class: (base of crypt of Lieberkuhn of small intestine) AnnotationAssertion(Annotation( ) "The basal portion (further from lumen) of a intestinal crypt that is located in the small intestine.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0013743") AnnotationAssertion(rdfs:label "base of crypt of Lieberkuhn of small intestine") SubClassOf( ) SubClassOf( ) # Class: (wall of crypt of Lieberkuhn of small intestine) AnnotationAssertion(Annotation( ) "The lateral parts of an intestinal crypt that is located in the small intestine, continuous distally with the base and proximally with the intestinal villus epithelium.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0013744") AnnotationAssertion(rdfs:label "wall of crypt of Lieberkuhn of small intestine") SubClassOf( ) SubClassOf( ) # Class: (zona intermedia of adrenal gland) AnnotationAssertion(Annotation( ) "A zone of the adrenal cortex located between the zona glomerulosa and the zona fasciculata.") AnnotationAssertion( "zona intermedia") AnnotationAssertion( "zona intermedia of suprarenal gland") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0013745") AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "currently postulated to be a site of initiation of adrenocyte proliferation and differentiation and a zone containing the adrenal cortical stem cells. Present in some rat species.") AnnotationAssertion(rdfs:label "zona intermedia of adrenal gland") SubClassOf(Annotation( "cjm"^^xsd:string) ) # Class: (basibranchial element) AnnotationAssertion(Annotation( ) Annotation( "TAO:wd"^^xsd:string) "Endochondral element that is ventral, median, and associated with a single pharyngeal arch in the pharyngeal arch 3-7 skeleton.") AnnotationAssertion(Annotation( ) "Median ventral cartilage or bony element at the ventral point of a branchial arch, behind the tongue[http://www.fishbase.org/Glossary/Glossary.php?q=basibranchial&sc=is].") AnnotationAssertion(Annotation( "ZFA:0000170") "basibranchial") AnnotationAssertion(Annotation( "ZFA:0000170") Annotation( ) "basibranchials") AnnotationAssertion( "uberon") AnnotationAssertion( "copula 1") AnnotationAssertion(Annotation( "AAO:0000686") "copula I") AnnotationAssertion( "UBERON:0013746") AnnotationAssertion(rdfs:label "basibranchial element") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "ZFA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (basibranchial cartilage) AnnotationAssertion(Annotation( ) Annotation( "TAO:wd"^^xsd:string) "A basibranchial element that is cartilage. Basibranchial elements are ventral, median, and associated with a single pharyngeal arch in the pharyngeal arch 3-7 skeleton.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0013747") AnnotationAssertion(rdfs:label "basibranchial cartilage") SubClassOf( ) SubClassOf( ) # Class: (ulnar metaphysis) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A metaphysis that is part of a ulna.") AnnotationAssertion( "FMA:33767") AnnotationAssertion(Annotation( "FMA:33767") "metaphysis of ulna") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0013748") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "ulnar metaphysis") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (metaphysis of humerus) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A metaphysis that is part of a metaphysis.") AnnotationAssertion( "FMA:32830") AnnotationAssertion(Annotation( "FMA:32830") "diaphyseal end of humerus") AnnotationAssertion(Annotation( "FMA:32830") "humeral metaphysis") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0013749") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "metaphysis of humerus") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (metaphysis of tibia) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A metaphysis that is part of a tibia.") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37772") AnnotationAssertion( "FMA:33135") AnnotationAssertion( "MA:0003106") AnnotationAssertion(Annotation( "FMA:33135") "tibial metaphysis") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0013750") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "metaphysis of tibia") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (metaphysis of radius) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A metaphysis that is part of a radius bone.") AnnotationAssertion( "FMA:33789") AnnotationAssertion(Annotation( "FMA:33789") "radial metaphysis") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0013751") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "metaphysis of radius") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (diaphysis of metacarpal bone) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A diaphysis that is part of a metacarpal bone.") AnnotationAssertion( "FMA:33804") AnnotationAssertion(Annotation( "FMA:33804") "body of metacarpal") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) "corpus ossis metacarpi") AnnotationAssertion(Annotation( "FMA:33804") "metacarpal bone diaphysis") AnnotationAssertion(Annotation( "FMA:33804") "shaft of metacarpal") AnnotationAssertion(Annotation( "FMA:33804") "shaft of metacarpal bone") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0013752") AnnotationAssertion(rdfs:label "diaphysis of metacarpal bone") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (distal epiphysis of metacarpal bone) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A distal epiphysis that is part of a metacarpal bone.") AnnotationAssertion( "FMA:33798") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) "caput ossis metacarpi") AnnotationAssertion(Annotation( "FMA:33798") "distal end of metacarpal bone") AnnotationAssertion(Annotation( "FMA:33798") "head of metacarpal bone") AnnotationAssertion(Annotation( "FMA:33798") "lower end of metacarpal bone") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0013753") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "distal epiphysis of metacarpal bone") SubClassOf( ) SubClassOf( ) # Class: (integumentary system layer) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An organ component layer that is part of a integumental system.") AnnotationAssertion( ) AnnotationAssertion( "layer of skin") AnnotationAssertion( "skin layer") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0013754") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "integumentary system layer") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (arterial blood) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A blood that is part of a artery.") AnnotationAssertion( "FMA:83066") AnnotationAssertion(Annotation( "FMA:83066") "arterial blood") AnnotationAssertion(Annotation( "FMA:83066") "blood in artery") AnnotationAssertion(Annotation( "FMA:83066") "portion of arterial blood") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0013755") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "arterial blood") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (venous blood) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A blood that is part of a vein.") AnnotationAssertion( "FMA:83067") AnnotationAssertion(Annotation( "FMA:83067") "blood in vein") AnnotationAssertion(Annotation( "FMA:83067") "portion of venous blood") AnnotationAssertion(Annotation( "FMA:83067") "venous blood") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0013756") AnnotationAssertion(rdfs:label "venous blood") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (capillary blood) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A blood that is part of a capillary.") AnnotationAssertion( "FMA:263901") AnnotationAssertion( "NCIT:C32212") AnnotationAssertion( "blood in capillary") AnnotationAssertion(Annotation( "FMA:263901") "portion of blood in capillary") AnnotationAssertion( "portion of capillary blood") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0013757") AnnotationAssertion(rdfs:label "capillary blood") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (cervical os) AnnotationAssertion(Annotation( ) "One of two openings in the uterine cervix.") AnnotationAssertion( "FMA:20422") AnnotationAssertion( "uberon") AnnotationAssertion( "cervical opening") AnnotationAssertion( "uterine cervix opening") AnnotationAssertion( "UBERON:0013758") AnnotationAssertion(rdfs:label "cervical os") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (internal cervical os) AnnotationAssertion(Annotation( ) "Opening of uterine cervix into the body of the uterus.") AnnotationAssertion(Annotation( ) "The internal orifice of the uterus (or internal orifice of the cervix uteri or internal os) is an interior narrowing of the uterine cavity. It corresponds to a slight constriction known as the isthmus that can be observed on the surface of the uterus about midway between the apex and base[Wikipedia:Internal_orifice_of_the_uterus].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:17747") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "internal orifice") AnnotationAssertion(Annotation( ) "internal os") AnnotationAssertion(Annotation( "FMA:17747") "internal os") AnnotationAssertion( "UBERON:0013759") AnnotationAssertion(rdfs:label "internal cervical os") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (external cervical os) AnnotationAssertion(Annotation( ) "Opening of uterine cervix into the vagina.") AnnotationAssertion(Annotation( ) "The external orifice of the uterus (or ostium of uterus, or external os) is a small, depressed, somewhat circular aperture on the rounded extremity of the vaginal portion of the cervix. Through this aperture, the cervical cavity communicates with that of the vagina. The external orifice is bounded by two lips, an anterior and a posterior. The anterior is shorter and thicker, though it projects lower than the posterior because of the slope of the cervix. Normally, both lips are in contact with the posterior vaginal wall. Prior to pregnancy, the external orifice has a rounded shape when viewed through the vaginal canal (as through a speculum). Following parturition, the orifice takes on an appearance more like a transverse slit or is 'H-shaped'[Wikipedia:External_orifice_of_the_uterus].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:76836") AnnotationAssertion( "NCIT:C32491") AnnotationAssertion(Annotation( "ncithesaurus:Ectocervical_Os") "UMLS:C1512165") AnnotationAssertion(Annotation( "FMA:76836") "external os of uterus") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) "ostium uteri") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "external os") AnnotationAssertion(Annotation( ) "ostium of uterus") AnnotationAssertion( "UBERON:0013760") AnnotationAssertion(rdfs:label "external cervical os") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (cervical cavity) AnnotationAssertion(Annotation( ) "The cavity formed by the walls of the cervix.") AnnotationAssertion( ) AnnotationAssertion( "BTO:0002249") AnnotationAssertion( "FMA:17746") AnnotationAssertion(Annotation( "FMA:17746") "lumen of cervix of uterus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "canal of the cervix") AnnotationAssertion(Annotation( "BTO:0002249") "cavity of cervix") AnnotationAssertion(Annotation( ) "cervical canal") AnnotationAssertion(Annotation( "BTO:0002249") "cervical canal of uterus") AnnotationAssertion(Annotation( ) "endocervical") AnnotationAssertion(Annotation( ) "endocervical canal") AnnotationAssertion(Annotation( "BTO:0002249") "endocervical canal") AnnotationAssertion(Annotation( ) "endocervix") AnnotationAssertion( "UBERON:0013761") AnnotationAssertion(rdfs:label "cervical cavity") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete sensory epithelium of spiral organ) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0013763") AnnotationAssertion(rdfs:label "obsolete sensory epithelium of spiral organ") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (common crus of semicircular duct) AnnotationAssertion(Annotation( ) "A nonampullary end of the superior or posterior semicircular ducts.") AnnotationAssertion( "common crus") AnnotationAssertion( "FMA:71881") AnnotationAssertion( "TAO:0005411") AnnotationAssertion( "ZFA:0005411") AnnotationAssertion( "common membranous limb of membranous semicircular ducts") AnnotationAssertion(Annotation( "FMA:71881") "common membranous limb of semicircular ducts") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) Annotation( ) "crus membranaceum commune ductus semicircularis") AnnotationAssertion(Annotation( ) "crus membranaceum commune ductuum semicircularium") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0013764") AnnotationAssertion(rdfs:label "common crus of semicircular duct") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (digestive system element) AnnotationAssertion(Annotation( ) "Any of the organs or elements that are part of the digestive system. Examples: tongue, esophagus, spleen, crop, lunge feeding organ, tooth elements.") AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37843") AnnotationAssertion( "digestive organ") AnnotationAssertion( "digestive system organ") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0013765") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "digestive system element") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (epicanthal fold) AnnotationAssertion(Annotation( "MGI:smb"^^xsd:string) Annotation( "VT:0006168") "A fold of skin of the upper eyelid that partially covers the inner corner of the eye.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:59370") AnnotationAssertion( "epicanthic fold") AnnotationAssertion( "epicanthus") AnnotationAssertion( "eye fold") AnnotationAssertion(Annotation( "FMA:59370") "medial canthic fold") AnnotationAssertion(Annotation( "FMA:59370") "palpebronasal fold") AnnotationAssertion(Annotation( ) "plica palpebronasalis") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0013766") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "epicanthal fold") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) # Class: (frontal process of maxilla) AnnotationAssertion(Annotation( ) "A plate of bone from the maxilla that that projects upward, medialward, and backward, by the side of the nose, forming part of its lateral boundary[WP,modified].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:52894") AnnotationAssertion(Annotation( "FMA:52894") "processus frontalis (maxilla)") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:52894") "frontal appendage of maxilla") AnnotationAssertion(Annotation( ) "frontal process of the maxilla") AnnotationAssertion(Annotation( ) "nasal process of maxilla") AnnotationAssertion(Annotation( ) Annotation( ) "processus frontalis maxillae") AnnotationAssertion( "UBERON:0013767") AnnotationAssertion(rdfs:label "frontal process of maxilla") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (great vessel of heart) AnnotationAssertion(Annotation( ) "Great vessels is a term used to refer collectively to the large vessels that bring blood to and from the heart.") AnnotationAssertion( "great vessel") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:36460") AnnotationAssertion( "great vessel of thorax") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0013768") AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "Groupings may vary - typically pulmonary vessels and aorta and vena cavae") AnnotationAssertion(rdfs:label "great vessel of heart") SubClassOf( ) # Class: (uterine lumen) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An organ cavity that is part of a uterus.") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:36273") AnnotationAssertion( "FMA:17745") AnnotationAssertion(Annotation( "FMA:17745") "cavity of uterus") AnnotationAssertion(Annotation( "FMA:17745") "uterine cavity") AnnotationAssertion( "uterine space") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0013769") AnnotationAssertion(rdfs:label "uterine lumen") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (intermammary cleft) AnnotationAssertion( "FMA:55264") AnnotationAssertion( "uberon") AnnotationAssertion( "intermammary cleavage") AnnotationAssertion( "intermammary sulcus") AnnotationAssertion( "UBERON:0013770") AnnotationAssertion(rdfs:label "intermammary cleft") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (line connecting laterally paired nipples) AnnotationAssertion(Annotation( ) "Line across midline connecting a left and right nipples.") AnnotationAssertion( "In mammals with multiple pairs of nipples, this line is only applicable for laterally homologous nipples") AnnotationAssertion( "intermammary line") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0013771") AnnotationAssertion(rdfs:label "line connecting laterally paired nipples") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (left nipple) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A nipple that is in_the_left_side_of a body proper.") AnnotationAssertion( "https://github.com/obophenotype/uberon/wiki/Modeling-paired-structures-Design-Pattern"^^xsd:anyURI) AnnotationAssertion( "FMA:223695") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0013772") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "left nipple") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (right nipple) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A nipple that is in_the_right_side_of a body proper.") AnnotationAssertion( "https://github.com/obophenotype/uberon/wiki/Modeling-paired-structures-Design-Pattern"^^xsd:anyURI) AnnotationAssertion( "FMA:223693") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0013773") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "right nipple") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (diaphysis of metatarsal bone) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A diaphysis that is part of a metatarsal bone.") AnnotationAssertion( "FMA:33826") AnnotationAssertion( "diaphysis of metatarsal") AnnotationAssertion(Annotation( "FMA:33826") "metatarsal bone diaphysis") AnnotationAssertion( "metatarsal diaphysis") AnnotationAssertion(Annotation( "FMA:33826") "shaft of metatarsal bone") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0013774") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "diaphysis of metatarsal bone") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (skin of palmar/plantar part of autopod) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A zone of skin that is part of a palmar/plantar part of autopod.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0013776") AnnotationAssertion(rdfs:label "skin of palmar/plantar part of autopod") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (skin of palm of manus) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A zone of skin that is part of a palmar part of manus.") AnnotationAssertion( ) AnnotationAssertion( "FMA:38301") AnnotationAssertion(Annotation( "FMA:38301") "palmar skin of hand") AnnotationAssertion( "skin of palmar area of hand") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0013777") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "skin of palm of manus") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (skin of sole of pes) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A zone of skin that is part of a skin of pes.") AnnotationAssertion( ) AnnotationAssertion( "FMA:37849") AnnotationAssertion(Annotation( "FMA:37849") "plantar skin of foot") AnnotationAssertion(Annotation( "FMA:37849") "skin of plantar part of foot") AnnotationAssertion(Annotation( "FMA:37849") "skin of sole of foot") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0013778") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "skin of sole of pes") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (nigrostriatal tract) AnnotationAssertion(Annotation( "BIRNLEX:4107") "The term nigrostriatal fibers refers to a dopaminergic fiber pathway connecting the substantia nigra with the striatum. It is not readily distinguished in myelin-stained cross-sections (Carpenter-83).") AnnotationAssertion( "todo - connect this to dopamine related terms") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:ns") AnnotationAssertion( "BAMS:nst") AnnotationAssertion( "BIRNLEX:4107") AnnotationAssertion( "MBA:102") AnnotationAssertion(Annotation( "BIRNLEX:4107") "UMLS:C0815010") AnnotationAssertion(Annotation( "BIRNLEX:4107") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=500") AnnotationAssertion(Annotation( "BIRNLEX:4107") "comb bundle") AnnotationAssertion(Annotation( "BIRNLEX:4107") "nigrostriatal bundle") AnnotationAssertion(Annotation( "BIRNLEX:4107") "nigrostriatal fibers") AnnotationAssertion(Annotation( "BIRNLEX:4107") "nigrostriatal tract") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BIRNLEX:4107") "comb bundle") AnnotationAssertion(Annotation( "BIRNLEX:4107") "nigrostriatal bundle") AnnotationAssertion(Annotation( "BIRNLEX:4107") "nigrostriatal fibers") AnnotationAssertion(Annotation( "NeuroNames:500") Annotation( ) "nucleus caudalis centralis oculomotorii") AnnotationAssertion(Annotation( "NeuroNames:500") Annotation( ) "nucleus centralis nervi oculomotorii") AnnotationAssertion(Annotation( "NeuroNames:491") Annotation( ) "tegmentum mesencephalicum") AnnotationAssertion( "UBERON:0014169") AnnotationAssertion(rdfs:label "nigrostriatal tract") SubClassOf(Annotation( "NIFSTD"^^xsd:string) ) # Class: (piriform cortex layer 1) AnnotationAssertion(Annotation( "NLXANAT:091003") "Most superficial of 3 cytoarchitecturally defined layers of the piriform cortex, characterized by few neuronal cell bodies. It has been divided into a superficial part and a deep part.") AnnotationAssertion( "NLXANAT:091003") AnnotationAssertion(Annotation( "NLXANAT:091003") "layer 1 of piriform cortex") AnnotationAssertion(Annotation( "NLXANAT:091003") "piriform cortex layer 1") AnnotationAssertion(Annotation( "NLXANAT:091003") "piriform cortex plexiform layer") AnnotationAssertion(Annotation( "NLXANAT:091003") "plexiform layer of piriform cortex") AnnotationAssertion(Annotation( "NLXANAT:091003") "pyriform cortex layer 1") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NLXANAT:091003") "layer 1 of piriform cortex") AnnotationAssertion(Annotation( "NLXANAT:091003") "piriform cortex plexiform layer") AnnotationAssertion(Annotation( "NLXANAT:091003") "plexiform layer of piriform cortex") AnnotationAssertion(Annotation( "NLXANAT:091003") "pyriform cortex layer 1") AnnotationAssertion( "UBERON:0014277") AnnotationAssertion(rdfs:label "piriform cortex layer 1") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "NIFSTD"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (piriform cortex layer 2) AnnotationAssertion(Annotation( "NLXANAT:091006") "Middle of three cytoarchitecturally defined layers of the piriform cortex characterized by a compact layer of cell bodies. It can be divided into a superficial part and a more densely packed deep part.") AnnotationAssertion( "Maryann Martone") AnnotationAssertion( "DHBA:11336") AnnotationAssertion( "NLXANAT:091006") AnnotationAssertion(Annotation( "NLXANAT:091006") "layer 2 of piriform cortex") AnnotationAssertion(Annotation( "NLXANAT:091006") "layer II of piriform cortex") AnnotationAssertion(Annotation( "NLXANAT:091006") "piriform cortex layer 2") AnnotationAssertion(Annotation( "NLXANAT:091006") "piriform cortex layer II") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NLXANAT:091006") "layer 2 of piriform cortex") AnnotationAssertion(Annotation( "NLXANAT:091006") "layer II of piriform cortex") AnnotationAssertion(Annotation( "NLXANAT:091006") "piriform cortex layer II") AnnotationAssertion( "UBERON:0014280") AnnotationAssertion(rdfs:label "piriform cortex layer 2") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "NIFSTD"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (piriform cortex layer 3) AnnotationAssertion(Annotation( "NLXANAT:091009") "Deepest of 3 cytoarchitecturally defined layers of the piriform cortex characterized by a moderately high density of pyramidal cells and large numbers of basal dendrites descending from pyramidal cells in layer 2.") AnnotationAssertion( "Maryann Martone") AnnotationAssertion( "NLXANAT:091009") AnnotationAssertion(Annotation( "NLXANAT:091009") "layer 3 of piriform cortex") AnnotationAssertion(Annotation( "NLXANAT:091009") "piriform cortex layer 3") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NLXANAT:091009") "layer 3 of piriform cortex") AnnotationAssertion( "UBERON:0014283") AnnotationAssertion(rdfs:label "piriform cortex layer 3") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "NIFSTD"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (endopiriform nucleus) AnnotationAssertion(Annotation( "NLXANAT:091033") "An elongated nucleus consisting largely of multipolar spiny cells lying deep to the piriform cortex. According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, (Ed.), Academic Press, San Diego), it is part of the claustrum.") AnnotationAssertion( "Maryann Martone") AnnotationAssertion( ) AnnotationAssertion( "BAMS:EP") AnnotationAssertion( "DHBA:10371") AnnotationAssertion( "EMAPA:35311") AnnotationAssertion( "MBA:942") AnnotationAssertion( "NLXANAT:091033") AnnotationAssertion(Annotation( "NLXANAT:091033") "OldNeuroNames:2276") AnnotationAssertion(Annotation( "NLXANAT:091033") "endopiriform nucleus") AnnotationAssertion(Annotation( "NLXANAT:091033") "layer 4 of piriform cortex") AnnotationAssertion(Annotation( "NLXANAT:091033") "layer IV of piriform cortex") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NLXANAT:091033") "layer 4 of piriform cortex") AnnotationAssertion(Annotation( "NLXANAT:091033") "layer IV of piriform cortex") AnnotationAssertion( "UBERON:0014284") AnnotationAssertion(rdfs:label "endopiriform nucleus") SubClassOf( ) SubClassOf(Annotation( "NIFSTD"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (dorsal cap of Kooy) AnnotationAssertion( "NLXANAT:100307") AnnotationAssertion(Annotation( "NLXANAT:100307") "dorsal cap of kooy") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0014286") AnnotationAssertion(rdfs:label "dorsal cap of Kooy") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "NIFSTD"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (medial accessory olive) AnnotationAssertion(Annotation( "NLXANAT:100309") "Regional part of the inferior olivary complex.") AnnotationAssertion( ) AnnotationAssertion( "BAMS:IOma") AnnotationAssertion( "NLXANAT:100309") AnnotationAssertion(Annotation( "NLXANAT:100309") "MAO") AnnotationAssertion(Annotation( "NLXANAT:100309") "medial accessory olive") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0014287") AnnotationAssertion(rdfs:label "medial accessory olive") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "NIFSTD"^^xsd:string) ObjectSomeValuesFrom( )) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (extrastriate cortex) AnnotationAssertion(Annotation( "NLXANAT:200905010") "A group of cortical areas related by direct or indirect connectivity to the striate area 17 and functionally involved primarily in vision. They include the parastriate area 18, the peristriate area 19 and adjacent areas in the parietal lobe and temporal lobe (Adapted from BrainInfo and Zilles-1990).") AnnotationAssertion( "Maryann Martone") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0004704") AnnotationAssertion( "DHBA:10270") AnnotationAssertion( "NLXANAT:200905010") AnnotationAssertion(Annotation( "NLXANAT:200905010") "extrastriate areas") AnnotationAssertion(Annotation( "NLXANAT:200905010") "extrastriate cortex") AnnotationAssertion(Annotation( ) "peristriate cortex") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NLXANAT:200905010") "extrastriate areas") AnnotationAssertion(Annotation( "BTO:0004704") "extrastriate cortical area") AnnotationAssertion( "UBERON:0014370") AnnotationAssertion(rdfs:label "extrastriate cortex") SubClassOf(Annotation( "NIFSTD"^^xsd:string) ) SubClassOf(Annotation( "WP"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (future telencephalon) AnnotationAssertion(Annotation( "ZFA:0000571") Annotation( "ZFA:curator") "Embryonic structure that gives rise to the telencephalon.") AnnotationAssertion( "EHDAA2:0004424") AnnotationAssertion( "EMAPA:36024") AnnotationAssertion( "TAO:0000571") AnnotationAssertion( "ZFA:0000571") AnnotationAssertion(Annotation( "ZFA:0000571") "presumptive telencephalon") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0014371") AnnotationAssertion(rdfs:comment "paired anteriolateral division of the embryonic prosencephalon plus the lamina terminalis from which the olfactory lobes, cerebral cortex, and subcortical nuclei are derived[MP]") AnnotationAssertion(rdfs:label "future telencephalon") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "definitional"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (fibroelastic membrane of larynx) AnnotationAssertion(Annotation( ) "A layer of fibrous and elastic fibers, taking the place of the submucosa in the larynx. It is divided by the laryngeal ventricle into two parts: the quadrangular membrane superiorly and the conus elasticus inferiorly.") AnnotationAssertion( ) AnnotationAssertion( "FMA:55239") AnnotationAssertion(Annotation( "FMA:55239") "fibro-elastic membrane of larynx") AnnotationAssertion(Annotation( ) Annotation( ) "membrana fibroelastica laryngis") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0014372") AnnotationAssertion(rdfs:label "fibroelastic membrane of larynx") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (embryoid body) AnnotationAssertion(Annotation( ) Annotation( "EFO:0004988") "Embryoid bodies (EBs) are three-dimensional aggregates of pluripotent stem cells.") AnnotationAssertion( "in future this class may be ceded to another ontology if it falls outside the scope of in-vivo, non-pathological biology") AnnotationAssertion(Annotation( "Dorlands_Medical_Dictionary:MerckSource") Annotation( "BTO:0001718") "Embryoid bodies are structures resembling embryos, occurring in several types of germ cell tumors[BTO].") AnnotationAssertion( ) AnnotationAssertion( "BTO:0001718") AnnotationAssertion( "EFO:0004988") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "embryonic body") AnnotationAssertion( "UBERON:0014374") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "embryoid body") SubClassOf(Annotation( "EFO") ) SubClassOf(Annotation( "Wikipedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (intrinsic muscle of manus) AnnotationAssertion(Annotation( ) "Any of the intrinsic muscles of the manus (hand).") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:42380") AnnotationAssertion( "intrinsic hand muscle") AnnotationAssertion(Annotation( "FMA:42380") "intrinsic muscle of hand") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0014375") AnnotationAssertion(rdfs:label "intrinsic muscle of manus") SubClassOf( ) SubClassOf( ) # Class: (thenar muscle) AnnotationAssertion(Annotation( ) "Any of the muscles of the thenar eminence, a raised fleshy area on the palm of the hand near the base of the thumb.") AnnotationAssertion( "thenar") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:64916") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "thenar compartment") AnnotationAssertion(Annotation( ) "thenar eminence") AnnotationAssertion(Annotation( ) "thenar muscle") AnnotationAssertion(Annotation( ) "thenar muscles") AnnotationAssertion( "UBERON:0014376") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "thenar muscle") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (hypothenar muscle) AnnotationAssertion(Annotation( ) Annotation( ) "Any of three muscles of the palm that control the motion of the little finger.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:64917") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "hypothenar") AnnotationAssertion(Annotation( ) "hypothenar muscle") AnnotationAssertion(Annotation( ) "hypothenar muscles") AnnotationAssertion( "UBERON:0014377") AnnotationAssertion(rdfs:comment "The three muscles are: Abductor digiti minimi Flexor digiti minimi Opponens digiti minimi") AnnotationAssertion(rdfs:label "hypothenar muscle") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (intrinsic muscle of pes) AnnotationAssertion(Annotation( ) "Any of the intrinsic muscles of the pes (foot).") AnnotationAssertion( "FMA:65020") AnnotationAssertion(Annotation( "FMA:65020") "intrinsic muscle of foot") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0014378") AnnotationAssertion(rdfs:label "intrinsic muscle of pes") SubClassOf( ) SubClassOf( ) # Class: (adductor hallucis muscle) AnnotationAssertion(Annotation( ) "The Adductor hallucis (Adductor obliquus hallucis) arises by two headsboblique and transverse and is responsible for adducting the big toe. It is innervated by the lateral plantar nerve. It evolved from the contrahens I muscle as Man's ancestors' thumbs and big toes became opposable.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:37454") AnnotationAssertion(Annotation( "FMA:37454") "adductor hallucis") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "adductor hallucis") AnnotationAssertion(Annotation( ) "adductor transversus hallucis") AnnotationAssertion(Annotation( ) "contrahens I muscle") AnnotationAssertion( "UBERON:0014379") AnnotationAssertion(rdfs:label "adductor hallucis muscle") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (flexor digitorum brevis muscle) AnnotationAssertion(Annotation( ) "The flexor digitorum brevis lies in the middle of the sole of the foot, immediately above the central part of the plantar aponeurosis, with which it is firmly united. Its deep surface is separated from the lateral plantar vessels and nerves by a thin layer of fascia.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:36247") AnnotationAssertion( "FMA:37450") AnnotationAssertion(Annotation( "FMA:37450") "flexor digitorum brevis") AnnotationAssertion(Annotation( "FMA:37450") "flexor digitorum brevis of foot") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) "musculus flexor digitorum brevis") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "flexor digitorum brevis") AnnotationAssertion( "UBERON:0014380") AnnotationAssertion(rdfs:label "flexor digitorum brevis muscle") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (whorl of hair) AnnotationAssertion(Annotation( ) "A patch of hair growing in the opposite direction of the rest of the hair.") AnnotationAssertion( ) AnnotationAssertion( "hair whorl") AnnotationAssertion( "whorl") AnnotationAssertion( ) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0014381") AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "Hair whorls occur in most hairy animals, on the body as well as on the head. Hair whorls, also known as crowns, swirls, trichoglyphs, or cowlicks, can be either clockwise or counterclockwise in direction of growth.[WP]") AnnotationAssertion(rdfs:label "whorl of hair") SubClassOf( ) # Class: (collection of hairs on head or neck) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A collection of hairs that is part of a craniocervical region.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0014382") AnnotationAssertion(rdfs:label "collection of hairs on head or neck") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (aryepiglottic fold) AnnotationAssertion(Annotation( ) "The entrance of the larynx is a triangular opening, narrow in front, wide behind, and sloping obliquely downward and backward. It is bounded, in front, by the epiglottis; behind, by the apices of the arytenoid cartilages, the corniculate cartilages, and the interarytenoid notch; and on either side, by a fold of mucous membrane, enclosing ligamentous and muscular fibers, stretched between the side of the epiglottis and the apex of the arytenoid cartilage; this is the aryepiglottic fold, on the posterior part of the margin of which the cuneiform cartilage forms a more or less distinct whitish prominence, the cuneiform tubercle. These folds form the upper borders of the quadrangular membrane.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:55448") AnnotationAssertion( "NCIT:C32147") AnnotationAssertion(Annotation( "ncithesaurus:Aryteno-epiglottic_Fold") "UMLS:C1510944") AnnotationAssertion(Annotation( "FMA:55448") "ary-epiglottic fold") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "aryepiglottic folds") AnnotationAssertion(Annotation( ) "aryepiglottic sphincter") AnnotationAssertion(Annotation( ) "aryepiglottis") AnnotationAssertion(Annotation( ) Annotation( ) "plica aryepiglottica") AnnotationAssertion( "UBERON:0014385") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "aryepiglottic fold") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (vertebral endplate) AnnotationAssertion(Annotation( ) Annotation( "HPO:curators") "Either of the the top and bottom portions of the vertebral bodies that interface with the vertebral discs. It is composed of a layer of thickened cancellous bone.") AnnotationAssertion( "endplate") AnnotationAssertion( ) AnnotationAssertion( "BTO:0005552") AnnotationAssertion( "FMA:293500") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0014386") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "vertebral endplate") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (mesenchyme derived from neural crest) AnnotationAssertion(Annotation( ) Annotation( "OBOL:automatic"^^xsd:string) "Mesenchyme that develops_from the neural crest[Automatically generated definition].") AnnotationAssertion( "EMAPA:32735") AnnotationAssertion( "FMA:293883") AnnotationAssertion( "mesenchyme from neural crest") AnnotationAssertion( "neural crest derived mesenchyme") AnnotationAssertion( "neural crest mesenchyme") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0014387") AnnotationAssertion(rdfs:label "mesenchyme derived from neural crest") SubClassOf( ) SubClassOf( ) # Class: (kidney collecting duct epithelium) AnnotationAssertion(Annotation( "MGI:anna"^^xsd:string) Annotation( "MP:0011843") "The simple cuboidal epithelium lining the lumen of kidney collecting ducts.") AnnotationAssertion( "In mouse, the mature and differentiated CD epithelium comprises two unique cells types with principal cells responsible for vasopressin-regulated water reabsorption, and intercalated cells regulating acid-base homeostasis; injury to the epithelium is believed to cause epithelial cells to acquire mesenchymal characteristics via epithelial-mesenchymal transition (EMT), a process through which tubular epithelial cells may transform into interstitial fibroblasts and promote renal fibrosis") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37885") AnnotationAssertion( "collecting duct of renal tubule epithelium") AnnotationAssertion( "epithelium of collecting duct of renal tubule") AnnotationAssertion( "epithelium of renal collecting tubule") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0014388") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "kidney collecting duct epithelium") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (gustatory papilla of tongue) AnnotationAssertion(Annotation( "MGI:smb"^^xsd:string) Annotation( "MP:0006256") "A papilla that contain taste buds, including the fungiform, foliate, and circumvallate papillae.") AnnotationAssertion( "FMA:54822") AnnotationAssertion( "gustatory papilla") AnnotationAssertion( "taste papilla") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "gustatory papillae") AnnotationAssertion(Annotation( ) "taste papillae") AnnotationAssertion( "UBERON:0014389") AnnotationAssertion(rdfs:label "gustatory papilla of tongue") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (muscle layer of ileum) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A muscular coat that is part of a ileum.") AnnotationAssertion( "BTO:0005574") AnnotationAssertion( "FMA:14958") AnnotationAssertion(Annotation( "FMA:14958") "muscularis externa of ileum") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "ileal smooth muscle") AnnotationAssertion(Annotation( ) "muscularis propria of ileum") AnnotationAssertion(Annotation( ) "smooth muscle of ileum") AnnotationAssertion( "UBERON:0014390") AnnotationAssertion(rdfs:label "muscle layer of ileum") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (palmar/plantar sweat gland) AnnotationAssertion(Annotation( ) "A sweat gland that is part of the skin of the palmar part of the manus or plantar part of the pes.") AnnotationAssertion(Annotation( "MP:0000675") "in mice these are the only sweat glands present") AnnotationAssertion( "palm sweat gland") AnnotationAssertion( "palmar eccrine sweat gland") AnnotationAssertion( "sweat gland of palmar part of manus") AnnotationAssertion( "uberon") AnnotationAssertion( "palm/sole sweat gland") AnnotationAssertion( "palmar/plantar eccrine sweat gland") AnnotationAssertion( "sweat gland of palmar/plant part of autopod") AnnotationAssertion( "UBERON:0014391") AnnotationAssertion(rdfs:label "palmar/plantar sweat gland") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (sweat of palm) AnnotationAssertion(Annotation( ) "Sweat that is produced by the glands on the palmar and plantar surfaces.") AnnotationAssertion( "serves a purpose of increasing friction on the palms of hands or the pads of paws[WP]") AnnotationAssertion( "FMA:63084") AnnotationAssertion(Annotation( "FMA:63084") "palm sweat") AnnotationAssertion(Annotation( "FMA:63084") "palmar sweat") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0014392") AnnotationAssertion(rdfs:label "sweat of palm") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (sweat of axilla) AnnotationAssertion(Annotation( ) "Sweat that is produced by the glands of the axilla.") AnnotationAssertion( "FMA:63085") AnnotationAssertion(Annotation( "FMA:63085") "axillary sweat") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0014393") AnnotationAssertion(rdfs:label "sweat of axilla") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (uterine fat pad) AnnotationAssertion(Annotation( "MP:0008900") "Encapsulated adipose tissue associated with the uterus.") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37979") AnnotationAssertion( "uterine fat depot") AnnotationAssertion( "uberon") AnnotationAssertion( "peri-uterine fat pad") AnnotationAssertion( "periuterine fat pad") AnnotationAssertion( "UBERON:0014394") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "uterine fat pad") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (proximal mesopodial bone) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A proximal mesopodial endochondral element that is composed primarily of a bone tissue.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0014395") AnnotationAssertion(rdfs:label "proximal mesopodial bone") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (interscapular fat pad) AnnotationAssertion(Annotation( "MGI:rbabiuk") Annotation( "MGI:smb"^^xsd:string) "Encapsulated adipose tissue located between the scapulae.") AnnotationAssertion( "interscapular fat depot") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0014396") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "interscapular fat pad") SubClassOf( ) SubClassOf( ) # Class: (lateral process of malleus) AnnotationAssertion(Annotation( ) "A short projection from the base of the manubrium of the malleus, attached firmly to the drum membrane.") AnnotationAssertion( ) AnnotationAssertion( "FMA:52770") AnnotationAssertion( "MA:0002994") AnnotationAssertion(Annotation( "MA:0002994") "malleus process brevis") AnnotationAssertion(Annotation( "FMA:52770") "processus lateralis (malleus)") AnnotationAssertion(Annotation( ) "processus lateralis mallei") AnnotationAssertion(Annotation( ) "processus lateralis malleus") AnnotationAssertion( "short process of malleus") AnnotationAssertion(Annotation( ) Annotation( ) "tuberculum mallei") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "process brevis") AnnotationAssertion( "UBERON:0014397") AnnotationAssertion(rdfs:label "lateral process of malleus") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (respiratory muscle) AnnotationAssertion(Annotation( ) "Muscle that is part of the respiratory system.") AnnotationAssertion( "this class may be merged with 'respiratory system muscle'; check intercostals") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0014398") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "respiratory muscle") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (sinusoidal space) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An anatomical space that is enclosed by a sinusoid.") AnnotationAssertion( "FMA:63133") AnnotationAssertion(Annotation( "FMA:63133") "lumen of sinusoid") AnnotationAssertion(Annotation( "FMA:63133") "sinusoid lumen") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0014399") AnnotationAssertion(rdfs:label "sinusoidal space") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (hepatic sinusoidal space) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A sinusoidal space that is part of a hepatic sinusoid.") AnnotationAssertion( "FMA:262090") AnnotationAssertion(Annotation( "FMA:262090") "lumen of hepatic sinusoid") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0014400") AnnotationAssertion(rdfs:label "hepatic sinusoidal space") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (renal venous blood vessel) AnnotationAssertion(Annotation( "MGI:csmith"^^xsd:string) "Any member of the network of tubes that return blood from the renal tissues to the systemic circulation.") AnnotationAssertion(Annotation( "MA"^^xsd:string) "we follow MA and MP in distinguishing the venous blood vessel from the vein. The kidney cortex vein is not considered a renal vein, nor is the vasa recta") AnnotationAssertion( "EMAPA:31450") AnnotationAssertion( "MA:0002591") AnnotationAssertion(Annotation( "MA:0002591") "kidney venous blood vessel") AnnotationAssertion( "venous blood vessel of kidney") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "EMAPA:31450") "kidney venous system") AnnotationAssertion( "UBERON:0014401") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "renal venous blood vessel") SubClassOf( ) SubClassOf( ) # Class: (sex-specific anatomical structure) AnnotationAssertion(Annotation( "AEO:0000174") Annotation( "AEO:JB"^^xsd:string) "A part of the body present only in a specific gender.") AnnotationAssertion( "AEO:0000174") AnnotationAssertion( "WBbt:0005752") AnnotationAssertion( "gender-specific") AnnotationAssertion(Annotation( "AEO:0000174") "gender-specific anatomical structure") AnnotationAssertion( "sex-specific") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0014402") AnnotationAssertion(rdfs:label "sex-specific anatomical structure") SubClassOf( ) # Class: (male anatomical structure) AnnotationAssertion(Annotation( "AEO:0000175") Annotation( "AEO:JB"^^xsd:string) "A part of the body present only in males.") AnnotationAssertion( "AEO:0000175") AnnotationAssertion( "WBbt:0005757") AnnotationAssertion( "male-specific structure") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "WBbt:0005757") "male-specific") AnnotationAssertion( "UBERON:0014403") AnnotationAssertion(rdfs:label "male anatomical structure") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (female anatomical structure) AnnotationAssertion(Annotation( "AEO:0000176") Annotation( "AEO:JB"^^xsd:string) "A part of the body present only in females.") AnnotationAssertion( "AEO:0000176") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0014404") AnnotationAssertion(rdfs:label "female anatomical structure") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (nymph stage) AnnotationAssertion(Annotation( "UBERON:cjm"^^xsd:string) "A larval stage of that is the immature stage of some invertebrates that undergoe gradual metamorphosis (hemimetabolism) before reaching its adult stage.") AnnotationAssertion( ) AnnotationAssertion(Annotation( "BTO:0000954") "Any of various immature insects; especially: a larva of an insect (as a grasshopper, true bug, or mayfly) with incomplete metamorphosis that differs from the imago especially in size and in its incompletely developed wings and genitalia[BTO:0000954].") AnnotationAssertion( ) AnnotationAssertion( "BTO:0000954") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0000954") "nymph") AnnotationAssertion( "UBERON:0014405") AnnotationAssertion(rdfs:label "nymph stage") SubClassOf( ) # Class: (nauplius stage) AnnotationAssertion(Annotation( ) "The free-swimming first stage of the larva of certain crustaceans, having an unsegmented body with three pairs of appendages and a single median eye. The eye is known for that reason as the 'naupliar eye', and is often absent in later developmental stages, although it is retained into the adult form in some groups, such as the Notostraca.") AnnotationAssertion(Annotation( "BTO:0000915") "A crustacean larva in usually the first stage after leaving the egg and with three pairs of appendages, a median eye, and little or no segmentation[BTO:0000915].") AnnotationAssertion( "BTO:0000915") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0000915") "nauplius") AnnotationAssertion( "UBERON:0014406") AnnotationAssertion(rdfs:label "nauplius stage") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (metacromion) AnnotationAssertion(Annotation( ) "A process projecting backward and downward from the acromion of the scapula of some mammals.") AnnotationAssertion( "metacromion of scapula") AnnotationAssertion( "metacromion process") AnnotationAssertion( "scapular metacromion") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0014409") AnnotationAssertion(rdfs:label "metacromion") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (fibularis quartus) AnnotationAssertion(Annotation( ) "variant structure in human") AnnotationAssertion( "EMAPA:36260") AnnotationAssertion( "fibularis quartus muscle") AnnotationAssertion(Annotation( "EMAPA:36260") "peroneus digiti quarti") AnnotationAssertion( "peroneus quartus") AnnotationAssertion( "peroneus quartus muscle") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "EMAPA:36260") "peroneus digiti IV") AnnotationAssertion( "UBERON:0014410") AnnotationAssertion(rdfs:label "fibularis quartus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (greater sciatic notch) AnnotationAssertion(Annotation( "MURDOCH:865") "On the dorsal border of the wing of the ilium , at it's junction with the shaft is a cut away. This forms the Greater sciatic notch. The sciatic nerve runs over the notch in passage to the hindlimb.") AnnotationAssertion(Annotation( "HP:0010456") "deep indentation in the posterior border of the hip bone at the point of union of the ilium and ischium[HP:0010456].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:16902") AnnotationAssertion( "greater sacrosciatic notch") AnnotationAssertion(Annotation( ) Annotation( ) "incisura ischiadica major") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0014411") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "greater sciatic notch") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (sciatic notch) AnnotationAssertion(Annotation( ) "Either of two notches on the dorsal border of the hip bone on each side that when closed off by ligaments form the corresponding sciatic foramina.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0014430") AnnotationAssertion(rdfs:label "sciatic notch") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lesser sciatic notch) AnnotationAssertion(Annotation( ) "Below the ischial spine is a smaller notch, the lesser sciatic notch; it is smooth, coated in the recent state with cartilage, the surface of which presents two or three ridges corresponding to the subdivisions of the tendon of the Obturator internus, which winds over it. It is converted into a foramen, the lesser sciatic foramen, by the sacrotuberous and sacrospinous ligaments, and transmits the tendon of the Obturator internus, the nerve which supplies that muscle, and the internal pudendal vessels and nerve.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:16911") AnnotationAssertion(Annotation( ) Annotation( ) "incisura ischiadica minor") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0014436") AnnotationAssertion(rdfs:label "lesser sciatic notch") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (iliac crest) AnnotationAssertion(Annotation( "MURDOCH:931") "Is part of the pelvis on the edge of the wing of the ilium. Round in shape, dorsal to the pubis and ischium. Acts as structrure that muscles can attach too.") AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37602") AnnotationAssertion( "FMA:16914") AnnotationAssertion( "MA:0003053") AnnotationAssertion( "NCIT:C103818") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0014437") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "iliac crest") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (superior pubic ramus) AnnotationAssertion(Annotation( ) "The superior pubic ramus is a part of the pubic bone which forms a portion of the obturator foramen. It extends from the body to the median plane where it articulates with its fellow of the opposite side. It is conveniently described in two portions, viz. , a medial flattened part and a narrow lateral prismoid portion.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:16988") AnnotationAssertion(Annotation( "FMA:16988") "superior ramus of pubis") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "superior rami of the pubes") AnnotationAssertion(Annotation( ) "superior ramus of the pubis") AnnotationAssertion( "UBERON:0014438") AnnotationAssertion(rdfs:label "superior pubic ramus") SubClassOf( ) # Class: (inferior pubic ramus) AnnotationAssertion(Annotation( ) "The inferior pubic ramus is thin and flattened. It passes lateralward and downward from the medial end of the superior ramus; it becomes narrower as it descends and joins with the inferior ramus of the ischium below the obturator foramen.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:16989") AnnotationAssertion(Annotation( "FMA:16989") "inferior ramus of pubis") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "inferior rami of the pubes") AnnotationAssertion(Annotation( ) "inferior ramus of the pubis") AnnotationAssertion( "UBERON:0014439") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "inferior pubic ramus") SubClassOf( ) # Class: (ischiopubic ramus) AnnotationAssertion(Annotation( ) "The ischiopubic ramus is a compound structure consisting of the following two structures: from the pubis, the inferior pubic ramus from the ischium, the inferior ramus of the ischium It serves as part of the origin for the Obturator internus muscle. It also marks a vertex of the anal triangle and the urogenital triangle. The fascia of Colles is attached to its margin.") AnnotationAssertion( ) AnnotationAssertion( "FMA:43533") AnnotationAssertion(Annotation( "FMA:43533") "conjoint ramus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "ischiopubic rami") AnnotationAssertion(Annotation( ) "rami of the pubis and ischium") AnnotationAssertion( "UBERON:0014440") AnnotationAssertion(rdfs:label "ischiopubic ramus") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (ischial ramus) AnnotationAssertion( ) AnnotationAssertion( "FMA:17007") AnnotationAssertion(Annotation( "FMA:17007") "ramus of ischium") AnnotationAssertion(Annotation( "FMA:17007") "ramus ossis ischii") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) "ramusi ossis ischii") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0014441") AnnotationAssertion(rdfs:label "ischial ramus") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (superior ischial ramus) AnnotationAssertion(Annotation( ) "The superior ramus of the ischium (descending ramus) projects downward and backward from the body and presents for examination three surfaces: external, internal, and posterior. The external surface is quadrilateral in shape. It is bounded above by a groove which lodges the tendon of the Obturator externus; below, it is continuous with the inferior ramus; in front it is limited by the posterior margin of the obturator foramen; behind, a prominent margin separates it from the posterior surface. In front of this margin the surface gives origin to the Quadratus femoris, and anterior to this to some of the fibers of origin of the Obturator externus; the lower part of the surface gives origin to part of the Adductor magnus. The internal surface forms part of the bony wall of the lesser pelvis. In front it is limited by the posterior margin of the obturator foramen. Below, it is bounded by a sharp ridge which gives attachment to a falciform prolongation of the sacrotuberous ligament, and, more anteriorly, gives origin to the Transversus perinC&i and Ischiocavernosus. Posteriorly the ramus forms a large swelling, the tuberosity of the ischium.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:304318") AnnotationAssertion( "uberon") AnnotationAssertion( "superior ramus of ischium") AnnotationAssertion( "UBERON:0014442") AnnotationAssertion(rdfs:label "superior ischial ramus") SubClassOf( ) # Class: (inferior ischial ramus) AnnotationAssertion(Annotation( ) "The Inferior Ramus of the ischium (ascending ramus) is the thin, flattened part of the ischium, which ascends from the superior ramus, and joins the inferior ramus of the pubisbthe junction being indicated in the adult by a raised line. The outer surface is uneven for the origin of the obturator externus and some of the fibers of the adductor magnus; its inner surface forms part of the anterior wall of the pelvis. Its medial border is thick, rough, slightly everted, forms part of the outlet of the pelvis, and presents two ridges and an intervening space. The ridges are continuous with similar ones on the inferior ramus of the pubis: to the outer is attached the deep layer of the superficial perineal fascia (fascia of Colles), and to the inner the inferior fascia of the urogenital diaphragm. If these two ridges be traced downward, they will be found to join with each other just behind the point of origin of the transversus perinC&i; here the two layers of fascia are continuous behind the posterior border of the muscle. To the intervening space, just in front of the point of junction of the ridges, the transversus perinC&i is attached, and in front of this a portion of the crus penis vel clitoridis and the ischiocavernosus. Its lateral border is thin and sharp, and forms part of the medial margin of the obturator foramen.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "inferior rami of the pubis") AnnotationAssertion( "inferior ramus of ischium") AnnotationAssertion( "UBERON:0014443") AnnotationAssertion(rdfs:label "inferior ischial ramus") SubClassOf( ) # Class: (pubic ramus) AnnotationAssertion( ) AnnotationAssertion( "ramus of pubis") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0014444") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "pubic ramus") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (acetabular fossa) AnnotationAssertion(Annotation( "MURDOCH:100") "The acetabular fossa is the roughened depression in the centre of the acetabulum, surrounded by the lunate acetabular surface and the acetabular notch. The acetabular fossa provides an insertion point for the teres ligaments that secure the femoral head.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:17269") AnnotationAssertion(Annotation( ) Annotation( ) "fossa acetabularis") AnnotationAssertion(Annotation( "FMA:17269") "fossa acetabularis (acetabuli)") AnnotationAssertion(Annotation( ) Annotation( ) "fossa acetabuli") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0014445") AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "It is occupied by the ligament of head of femur[WP]") AnnotationAssertion(rdfs:label "acetabular fossa") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (acetabular notch) AnnotationAssertion(Annotation( ) "The acetabulum presents below a deep notch, the acetabular notch, which is continuous with a circular non-articular depression, the acetabular fossa, at the bottom of the cavity: this depression is perforated by numerous apertures, and lodges a mass of fat. The notch is converted into a foramen by the transverse ligament; through the foramen nutrient vessels and nerves enter the joint; the margins of the notch serve for the attachment of the ligament of the head of the femur.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:16944") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0014446") AnnotationAssertion(rdfs:label "acetabular notch") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pretectal nucleus) AnnotationAssertion(Annotation( ) Annotation( "ISBN:0471888893"^^xsd:string) "A neural nucleus of the pretectal area (between dorsal thalamus and optic tectum) that receives afferents primarily from the retina and the optic tectum and are involved in modulating motor behavior in response to visual input.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MP:0009638") "Any of the groups of neurons located between the thalamus and midbrain that receive binocular sensory input from retinal ganglion cells of the eyes and are responsible for maintaining the pupillary light reflex") AnnotationAssertion( "in hagfishes, there are two: the pretectal nucleus and the nucleus of the posterior commissure[ISBN:0471888893]") AnnotationAssertion(Annotation( "FMA"^^xsd:string) "see notes for pretectal region. Note this is midbrain in FMA, midbrain (mesencephalon) in HBA, midbrain in DHBA") AnnotationAssertion( ) AnnotationAssertion( "UBERON:0002994") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:PTA") AnnotationAssertion( "BIRNLEX:864") AnnotationAssertion( "DHBA:12182") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37919") AnnotationAssertion( "FMA:72401") AnnotationAssertion( "HBA:9083") AnnotationAssertion(Annotation( "BIRNLEX:864") "UMLS:C0175358") AnnotationAssertion(Annotation( "BIRNLEX:864") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=468") AnnotationAssertion(Annotation( "FMA:72401") "nucleus of pretectal area") AnnotationAssertion(Annotation( "FMA:72401") "pretectal area nucleus") AnnotationAssertion( "pretectal nucleus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:468") Annotation( ) "nucleus area pretectalis") AnnotationAssertion(Annotation( "NeuroNames:468") "nucleus of the pretectal area") AnnotationAssertion( "UBERON:0014450") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "pretectal nucleus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (tongue taste bud) AnnotationAssertion(Annotation( ) "A taste bud that is located on the tongue, situated on a gustatory papilla.") AnnotationAssertion( "gustatory papilla taste bud") AnnotationAssertion(Annotation( "MP:0006260") "gustatory papillae taste bud") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0014451") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "tongue taste bud") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (gustatory epithelium of tongue) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A gustatory epithelium that is part of a tongue.") AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:4099") AnnotationAssertion(Annotation( "BIRNLEX:4099") "UMLS:C1179150") AnnotationAssertion(Annotation( ) "lingual gustatory epithelium") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0014452") AnnotationAssertion(rdfs:label "gustatory epithelium of tongue") SubClassOf( ) # Class: (gustatory epithelium of palate) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A gustatory epithelium that is part of a roof of mouth.") AnnotationAssertion(Annotation( ) "palatal gustatory epithelium") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0014453") AnnotationAssertion(rdfs:label "gustatory epithelium of palate") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (visceral abdominal adipose tissue) AnnotationAssertion(Annotation( ) Annotation( ) Annotation( "CALOHA:paula") Annotation( "MGI:csmith"^^xsd:string) "Subcutaneous adipose tissue that is located in the peritoneal cavity.") AnnotationAssertion(Annotation( "BTO:0004041") "Adipose tissue located inside the peritoneal cavity, packed in between internal organs and torso. An excess of visceral fat is known as central obesity, or belly fat, the pot belly or beer belly effect, in which the abdomen protrudes excessively[BTO:0004041].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0004041") AnnotationAssertion( "CALOHA:TS-2405") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0004041") "abdominal fat") AnnotationAssertion( "intra-abdominal adipose tissue") AnnotationAssertion(Annotation( "BTO:0004041") "intra-abdominal fat") AnnotationAssertion(Annotation( "BTO:0004041") "organ fat") AnnotationAssertion(Annotation( "BTO:0004041") "visceral adipose tissue") AnnotationAssertion(Annotation( "BTO:0004041") "visceral fat") AnnotationAssertion( "UBERON:0014454") AnnotationAssertion(rdfs:label "visceral abdominal adipose tissue") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (subcutaneous abdominal adipose tissue) AnnotationAssertion(Annotation( ) Annotation( ) Annotation( "CALOHA:paula") Annotation( "MGI:csmith"^^xsd:string) "Subcutaneous adipose tissue that is located in the abdominal region.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "CALOHA:TS-2406") AnnotationAssertion( "abdominal subcutaneous adipose tissue") AnnotationAssertion( "subcutaneous abdominal fat") AnnotationAssertion( "subcutaneous fat of abdominal region") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0014455") AnnotationAssertion(rdfs:label "subcutaneous abdominal adipose tissue") SubClassOf( ) SubClassOf( ) # Class: (extraperitoneal space) AnnotationAssertion(Annotation( ) "The extraperitoneal space is the portion of the abdomen and pelvis which does not lie within peritoneum. It includes: Retroperitoneal space Retropubic space The space in the pelvis is divided into the following components: prevesical space perivesical space perirectal space.") AnnotationAssertion( "extraperitoneal") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:14730") AnnotationAssertion( "NCIT:C92208") AnnotationAssertion(Annotation( "ncithesaurus:Extraperitoneal_Space") "UMLS:C0230197") AnnotationAssertion(Annotation( ) Annotation( ) "spatium extraperitoneale") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0014456") AnnotationAssertion(rdfs:label "extraperitoneal space") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete adult eye primordium) AnnotationAssertion( "FBbt:10005249") AnnotationAssertion( "UBERON:0003071") AnnotationAssertion( "XAO:0000227") AnnotationAssertion( "EFO:0000240") AnnotationAssertion(Annotation( "EFO:0000240") "adult eye primordium early") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0014457") AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "obsolete as it groups developmentally very different structures") AnnotationAssertion(rdfs:label "obsolete adult eye primordium") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (female bulbospongiosus muscle) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A bulbospongiosus muscle that is part of a female reproductive system.") AnnotationAssertion( ) AnnotationAssertion( "bulbospongiosus of female") AnnotationAssertion( "female bulbospongiosus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0014458") AnnotationAssertion(rdfs:label "female bulbospongiosus muscle") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete ptychocyst) AnnotationAssertion(Annotation( ) Annotation( ) "A cnida that is glutinous and is capable of sticking to prey. Found on burrowing (tube) anemones, which help create the tube in which the animal lives.") AnnotationAssertion(Annotation( ) "glutinant cnida") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0014462") AnnotationAssertion(rdfs:comment "Will be added to GO or a cnidarian ontology") AnnotationAssertion(rdfs:label "obsolete ptychocyst") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (cardiac ganglion) AnnotationAssertion(Annotation( "ISBN:0-683-40008-8"^^xsd:string) Annotation( "MP:0003685") "Any of the parasympathetic ganglia of the cardiac plexus between the arch of the aorta and the bifurcation of the pulmonary artery.") AnnotationAssertion(Annotation( ) "Any of the parasympathetic ganglia of the cardiac plexus between the arch of the aorta and the bifurcation of the pulmonary artery[http://medical-dictionary.thefreedictionary.com/cardiac+ganglion].") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:36644") AnnotationAssertion( "FMA:77582") AnnotationAssertion(Annotation( "MP:0003685") "Wrisberg ganglion") AnnotationAssertion(Annotation( "FMA:77582") "cardiac ganglia set") AnnotationAssertion( "cardiac ganglion of Wrisberg") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) "ganglia cardiaca") AnnotationAssertion(Annotation( "FMA:77582") "ganglion of Wrisberg") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "cardiac ganglia") AnnotationAssertion( "UBERON:0014463") AnnotationAssertion(rdfs:label "cardiac ganglion") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (renal fat pad) AnnotationAssertion(Annotation( "MP:0008902") "Encapsulated adipose tissue associated with the kidney.") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "MP:0008902") "perirenal fat pad") AnnotationAssertion( "UBERON:0014464") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "renal fat pad") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (antorbital fenestra) AnnotationAssertion(Annotation( ) "An antorbital fenestra is an opening in the skull, in front of the eye sockets. This skull formation first appeared in archosaurs during the Triassic Period. Living birds today possess antorbital fenestrae, but the feature has been lost in modern crocodilians. In some archosaur species, the opening has closed but its location is still marked by a depression, or fossa, on the surface of the skull. This is called an antorbital fossa.") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "antorbital fenestrae") AnnotationAssertion( "UBERON:0014465") AnnotationAssertion(rdfs:label "antorbital fenestra") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (subarachnoid fissure) AnnotationAssertion( "FMA:75136") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0014466") AnnotationAssertion(rdfs:label "subarachnoid fissure") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (ansoparamedian fissure of cerebellum) AnnotationAssertion(Annotation( "NLXANAT:20081256") "Fissure between cerebellar hemispheric lobules VIIBi and VIIBii.") AnnotationAssertion( ) AnnotationAssertion( "BAMS:apf") AnnotationAssertion( "BAMS:apmf") AnnotationAssertion( "DHBA:266441733") AnnotationAssertion( "FMA:75137") AnnotationAssertion( "HBA:9413") AnnotationAssertion( "MBA:43") AnnotationAssertion( "NLXANAT:20081256") AnnotationAssertion(Annotation( "NLXANAT:20081256") "ansoparamedian fissure") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) "fissura ansoparamedianis") AnnotationAssertion(Annotation( "FMA:75137") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "fissura lunogracilis") AnnotationAssertion(Annotation( "NLXANAT:20081256") "lunogracile fissure") AnnotationAssertion(Annotation( "FMA:75137") "lunogracile fissure of cerebellum") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0014468") AnnotationAssertion(rdfs:label "ansoparamedian fissure of cerebellum") SubClassOf( ) # Class: (primary fissure of cerebellum) AnnotationAssertion(Annotation( ) "The monticulus of the cerebellum is divided by the primary fissure (or preclival fissure) into an anterior, raised part, the culmen or summit, and a posterior sloped part, the clivus; the quadrangular lobule is similarly divided.") AnnotationAssertion(Annotation( "NLXANAT:20081253") "primary fissure") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:pfcb") AnnotationAssertion( "FMA:83729") AnnotationAssertion( "HBA:9410") AnnotationAssertion( "MBA:1103") AnnotationAssertion( "NLXANAT:20081253") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) "fissura preclivalis") AnnotationAssertion(Annotation( "FMA:83729") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "fissura prima") AnnotationAssertion(Annotation( "FMA:83729") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "fissura prima cerebelli") AnnotationAssertion(Annotation( "FMA:83729") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "fissura superior anterior") AnnotationAssertion(Annotation( "FMA:83729") "preclival fissure") AnnotationAssertion(Annotation( "FMA:83729") "primary sulcus of cerebellum") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "preclival fissure") AnnotationAssertion( "UBERON:0014471") AnnotationAssertion(rdfs:label "primary fissure of cerebellum") SubClassOf( ) # Class: (precentral fissure of cerebellum) AnnotationAssertion(Annotation( "NLXANAT:20081251") "Fissure between cerebellar lobules I and II.") AnnotationAssertion( "compare with precentral sulcus") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:pce") AnnotationAssertion( "BAMS:pcn") AnnotationAssertion( "BAMS:prfcb") AnnotationAssertion( "FMA:83731") AnnotationAssertion( "HBA:9407") AnnotationAssertion( "MBA:1087") AnnotationAssertion( "NLXANAT:20081251") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) "fissura postlingualis cerebelli") AnnotationAssertion(Annotation( "FMA:83731") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "fissura praecentralis") AnnotationAssertion(Annotation( "FMA:83731") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "fissura precentralis cerebelli") AnnotationAssertion(Annotation( "FMA:83731") "post-lingual fissure of cerebellum") AnnotationAssertion(Annotation( "FMA:83731") "postlingual fissure") AnnotationAssertion(Annotation( "NLXANAT:20081251") "precentral fissure") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0014473") AnnotationAssertion(rdfs:label "precentral fissure of cerebellum") SubClassOf( ) SubClassOf(Annotation( "NIFSTD"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (postcentral fissure of cerebellum) AnnotationAssertion( "postcentral fissure") AnnotationAssertion( ) AnnotationAssertion( "BAMS:pofcb") AnnotationAssertion( "FMA:83732") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) "fissura postcentralis cerebelli") AnnotationAssertion(Annotation( "FMA:83732") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "fissura praeculminata") AnnotationAssertion(Annotation( "FMA:83732") "post-central fissure of cerebellum") AnnotationAssertion(Annotation( "FMA:83732") "postcentral fissure-2") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0014474") AnnotationAssertion(rdfs:label "postcentral fissure of cerebellum") SubClassOf( ) # Class: (thoracic skeleton) AnnotationAssertion(Annotation( ) Annotation( ) "Subdivision of skeletal system that consists of all skeletal elements in the thoracic region of the trunk. In most vertebrates this is the rib cage and sternum.") AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0002013") AnnotationAssertion( "FMA:77169") AnnotationAssertion( "skeleton of thorax") AnnotationAssertion( "thoracic part of axial skeleton") AnnotationAssertion(Annotation( "EHDAA2:0002013") "thoracic skeleton") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0014477") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "thoracic skeleton") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (rib skeletal system) AnnotationAssertion(Annotation( ) "Subdivision of skeletal system that consists of all ribs and rib joints in an organism. In many vertebrates this consists of the combination of the rib cage and all rib joints, but some vertebrates have ribs outside the thoracic rib cage.") AnnotationAssertion(Annotation( "Wikipedia"^^xsd:string) ) AnnotationAssertion( "FMA:265719") AnnotationAssertion( "TAO:0002100") AnnotationAssertion(Annotation( "TAO:0002100") "rib series") AnnotationAssertion( "uberon") AnnotationAssertion( "rib skeleton") AnnotationAssertion(Annotation( "FMA:265719") "set of all ribs") AnnotationAssertion( "UBERON:0014478") AnnotationAssertion(rdfs:label "rib skeletal system") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (sex skin) AnnotationAssertion(Annotation( ) "An area of skin adjacent to the female external genitals of various lower primates that undergo marked alteration in turgidity and often in color during estrus.") AnnotationAssertion( ) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0014481") AnnotationAssertion(rdfs:label "sex skin") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (ischial callosity) AnnotationAssertion(Annotation( ) "An area of hardened, leathery skin on either side of the base of the tail on the rump.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0014482") AnnotationAssertion(rdfs:label "ischial callosity") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (distal phalanx of digit 1) AnnotationAssertion(Annotation( ) "A distal phalanx that is part of a digit 1 [Automatically generated definition].") AnnotationAssertion(Annotation( "PHENOSCAPE:wd") "digit 1 distal phalanx") AnnotationAssertion(Annotation( ) Annotation( ) "distal phalanx of digit I") AnnotationAssertion( "distal phalanx of first digit") AnnotationAssertion( "uberon") AnnotationAssertion( "digit I P3") AnnotationAssertion( "first distal phalanx") AnnotationAssertion( "UBERON:0014483") AnnotationAssertion(rdfs:label "distal phalanx of digit 1") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (distal phalanx of digit 2) AnnotationAssertion(Annotation( ) "A distal phalanx that is part of a digit 2 [Automatically generated definition].") AnnotationAssertion( "2nd digit distal phalanx") AnnotationAssertion(Annotation( "PHENOSCAPE:wd") "digit 2 distal phalanx") AnnotationAssertion( "distal phalanx of 2nd digit") AnnotationAssertion(Annotation( ) Annotation( ) "distal phalanx of digit II") AnnotationAssertion( "distal phalanx of index digit") AnnotationAssertion( "distal phalanx of second digit") AnnotationAssertion( "second digit distal phalanx") AnnotationAssertion( "second distal phalanx") AnnotationAssertion( "uberon") AnnotationAssertion( "digit II P3") AnnotationAssertion( "UBERON:0014484") AnnotationAssertion(rdfs:label "distal phalanx of digit 2") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (distal phalanx of digit 3) AnnotationAssertion(Annotation( ) Annotation( ) Annotation( ) "A distal phalanx that is part of a digit 3. In odd-toes ungulates (Perissodactyla e.g. horses) this is called the coffin bone. In even-toed ungulates (Artiodactyla e.g cattle) this is associated with the medial claw.") AnnotationAssertion(Annotation( ) Annotation( "NCBITaxon:9788") "the bottommost bone in the equine leg and is encased by the hoof capsule. The distal phalanx articulates with both the middle phalanx and the distal sesamoid, forming the distal interphalangeal joint[Wikipedia:Coffin_bone]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "3rd digit distal phalanx") AnnotationAssertion(Annotation( "PHENOSCAPE:wd") "digit 3 distal phalanx") AnnotationAssertion( "distal phalanx of 3rd digit") AnnotationAssertion(Annotation( ) Annotation( ) "distal phalanx of digit III") AnnotationAssertion( "distal phalanx of middle digit") AnnotationAssertion( "distal phalanx of third digit") AnnotationAssertion(Annotation( ) Annotation( "NCBITaxon:9788"^^xsd:string) "equine 3rd phalanx of digit 3") AnnotationAssertion(Annotation( ) Annotation( "NCBITaxon:9788"^^xsd:string) "equine distal phalanx") AnnotationAssertion( "third digit distal phalanx") AnnotationAssertion( "third distal phalanx") AnnotationAssertion(Annotation( "NCBITaxon:9787") "coffin bone") AnnotationAssertion(Annotation( "NCBITaxon:91561"^^xsd:string) "medial claw of artiodactyl") AnnotationAssertion(Annotation( "NCBITaxon:91561"^^xsd:string) "medial claw of ruminant hoof") AnnotationAssertion(Annotation( "NCBITaxon:91561"^^xsd:string) "medial ungual phalanx of artiodactyl") AnnotationAssertion(Annotation( "NCBITaxon:9787") "pedal bone") AnnotationAssertion( "uberon") AnnotationAssertion( "digit III P3") AnnotationAssertion( "UBERON:0014485") AnnotationAssertion(rdfs:label "distal phalanx of digit 3") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (distal phalanx of digit 4) AnnotationAssertion(Annotation( ) "A distal phalanx that is part of a digit 4 [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "4th digit distal phalanx") AnnotationAssertion(Annotation( "PHENOSCAPE:wd") "digit 4 distal phalanx") AnnotationAssertion( "distal phalanx of 4th digit") AnnotationAssertion(Annotation( ) Annotation( ) "distal phalanx of digit IV") AnnotationAssertion( "distal phalanx of fourth digit") AnnotationAssertion( "distal phalanx of ring digit") AnnotationAssertion( "fourth digit distal phalanx") AnnotationAssertion( "fourth distal phalanx") AnnotationAssertion(Annotation( "NCBITaxon:91561"^^xsd:string) "lateral claw of artiodactyl") AnnotationAssertion(Annotation( "NCBITaxon:91561"^^xsd:string) "lateral claw of ruminant hoof") AnnotationAssertion(Annotation( "NCBITaxon:91561"^^xsd:string) "lateral ungual phalanx of artiodactyl") AnnotationAssertion( "uberon") AnnotationAssertion( "digit IV P3") AnnotationAssertion( "UBERON:0014486") AnnotationAssertion(rdfs:label "distal phalanx of digit 4") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (distal phalanx of digit 5) AnnotationAssertion(Annotation( ) "A distal phalanx that is part of a digit 5 [Automatically generated definition].") AnnotationAssertion( "5th digit distal phalanx") AnnotationAssertion(Annotation( "PHENOSCAPE:wd") "digit 5 distal phalanx") AnnotationAssertion( "distal phalanx of 5th digit") AnnotationAssertion(Annotation( ) Annotation( ) "distal phalanx of digit V") AnnotationAssertion( "distal phalanx of fifth digit") AnnotationAssertion( "distal phalanx of little digit") AnnotationAssertion( "fifth digit distal phalanx") AnnotationAssertion( "fifth distal phalanx") AnnotationAssertion( "uberon") AnnotationAssertion( "digit V P3") AnnotationAssertion( "UBERON:0014487") AnnotationAssertion(rdfs:label "distal phalanx of digit 5") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (middle phalanx of digit 2) AnnotationAssertion(Annotation( ) "A middle phalanx that is part of a digit 2 [Automatically generated definition].") AnnotationAssertion( "2nd digit intermediate phalanx") AnnotationAssertion( "2nd digit middle phalanx") AnnotationAssertion( "2nd digit of intermediate phalanx") AnnotationAssertion( "2nd digit of middle phalanx") AnnotationAssertion( "digit 2 intermediate phalanx") AnnotationAssertion( "digit 2 middle phalanx") AnnotationAssertion( "intermediate phalanx of 2nd digit") AnnotationAssertion( "intermediate phalanx of digit 2") AnnotationAssertion( "intermediate phalanx of second digit") AnnotationAssertion( "middle phalanx of 2nd digit") AnnotationAssertion(Annotation( ) Annotation( ) "middle phalanx of digit II") AnnotationAssertion( "middle phalanx of index digit") AnnotationAssertion( "middle phalanx of second digit") AnnotationAssertion( "second digit intermediate phalanx") AnnotationAssertion( "second digit middle phalanx") AnnotationAssertion( "second middle phalanx") AnnotationAssertion( "uberon") AnnotationAssertion( "digit II P2") AnnotationAssertion( "UBERON:0014488") AnnotationAssertion(rdfs:label "middle phalanx of digit 2") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (middle phalanx of digit 3) AnnotationAssertion(Annotation( ) "A middle phalanx that is part of a digit 3 [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "3rd digit intermediate phalanx") AnnotationAssertion( "3rd digit middle phalanx") AnnotationAssertion( "3rd digit of intermediate phalanx") AnnotationAssertion( "3rd digit of middle phalanx") AnnotationAssertion( "digit 3 intermediate phalanx") AnnotationAssertion( "digit 3 middle phalanx") AnnotationAssertion( "intermediate phalanx of 3rd digit") AnnotationAssertion( "intermediate phalanx of digit 3") AnnotationAssertion( "intermediate phalanx of third digit") AnnotationAssertion( "middle phalanx of 3rd digit") AnnotationAssertion(Annotation( ) Annotation( ) "middle phalanx of digit III") AnnotationAssertion( "middle phalanx of middle digit") AnnotationAssertion( "middle phalanx of third digit") AnnotationAssertion( "third digit intermediate phalanx") AnnotationAssertion( "third digit middle phalanx") AnnotationAssertion( "third middle phalanx") AnnotationAssertion( "uberon") AnnotationAssertion( "digit III P2") AnnotationAssertion( "UBERON:0014489") AnnotationAssertion(rdfs:label "middle phalanx of digit 3") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (middle phalanx of digit 4) AnnotationAssertion(Annotation( ) "A middle phalanx that is part of a digit 4 [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( "4th digit intermediate phalanx") AnnotationAssertion( "4th digit middle phalanx") AnnotationAssertion( "4th digit of intermediate phalanx") AnnotationAssertion( "4th digit of middle phalanx") AnnotationAssertion( "digit 4 intermediate phalanx") AnnotationAssertion( "digit 4 middle phalanx") AnnotationAssertion( "fourth digit intermediate phalanx") AnnotationAssertion( "fourth digit middle phalanx") AnnotationAssertion( "fourth middle phalanx") AnnotationAssertion( "intermediate phalanx of 4th digit") AnnotationAssertion( "intermediate phalanx of digit 4") AnnotationAssertion( "intermediate phalanx of fourth digit") AnnotationAssertion( "middle phalanx of 4th digit") AnnotationAssertion(Annotation( ) Annotation( ) "middle phalanx of digit IV") AnnotationAssertion( "middle phalanx of fourth digit") AnnotationAssertion( "middle phalanx of ring digit") AnnotationAssertion( "uberon") AnnotationAssertion( "digit IV P2") AnnotationAssertion( "UBERON:0014490") AnnotationAssertion(rdfs:label "middle phalanx of digit 4") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (middle phalanx of digit 5) AnnotationAssertion(Annotation( ) "A middle phalanx that is part of a digit 5 [Automatically generated definition].") AnnotationAssertion( "5th digit intermediate phalanx") AnnotationAssertion( "5th digit middle phalanx") AnnotationAssertion( "5th digit of intermediate phalanx") AnnotationAssertion( "5th digit of middle phalanx") AnnotationAssertion( "digit 5 intermediate phalanx") AnnotationAssertion( "digit 5 middle phalanx") AnnotationAssertion( "fifth digit intermediate phalanx") AnnotationAssertion( "fifth digit middle phalanx") AnnotationAssertion( "fifth middle phalanx") AnnotationAssertion( "intermediate phalanx of 5th digit") AnnotationAssertion( "intermediate phalanx of digit 5") AnnotationAssertion( "intermediate phalanx of fifth digit") AnnotationAssertion( "middle phalanx of 5th digit") AnnotationAssertion(Annotation( ) Annotation( ) "middle phalanx of digit V") AnnotationAssertion( "middle phalanx of fifth digit") AnnotationAssertion( "middle phalanx of little digit") AnnotationAssertion( "uberon") AnnotationAssertion( "digit V P2") AnnotationAssertion( "UBERON:0014491") AnnotationAssertion(rdfs:label "middle phalanx of digit 5") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (proximal phalanx of digit 1) AnnotationAssertion(Annotation( ) "A proximal phalanx that is part of a autopod digit 1 [Automatically generated definition].") AnnotationAssertion( "digit I P1") AnnotationAssertion(Annotation( "PHENOSCAPE:wd") "digit I-1") AnnotationAssertion( "first proximal phalanx of autopod") AnnotationAssertion(Annotation( ) Annotation( ) "proximal phalanx of digit I") AnnotationAssertion( "proximal phalanx of first digit of autopod") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0014501") AnnotationAssertion(rdfs:label "proximal phalanx of digit 1") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (proximal phalanx of digit 2) AnnotationAssertion(Annotation( ) "A proximal phalanx that is part of a autopod digit 2 [Automatically generated definition].") AnnotationAssertion( "2nd digit of autopod proximal phalanx") AnnotationAssertion( "2nd digit proximal phalanx") AnnotationAssertion( "autopod digit 2 proximal phalanx") AnnotationAssertion(Annotation( "PHENOSCAPE:wd") "digit II-1") AnnotationAssertion( "digit IU P1") AnnotationAssertion( "proximal phalanx of 2nd digit") AnnotationAssertion( "proximal phalanx of 2nd digit of autopod") AnnotationAssertion(Annotation( ) Annotation( ) "proximal phalanx of digit II") AnnotationAssertion( "proximal phalanx of index digit") AnnotationAssertion( "proximal phalanx of second digit") AnnotationAssertion( "proximal phalanx of second digit of autopod") AnnotationAssertion( "second digit proximal phalanx") AnnotationAssertion( "second proximal phalanx of autopod") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0014502") AnnotationAssertion(rdfs:label "proximal phalanx of digit 2") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (proximal phalanx of digit 3) AnnotationAssertion(Annotation( ) "A proximal phalanx that is part of a autopod digit 3 [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "3rd digit of autopod proximal phalanx") AnnotationAssertion( "3rd digit proximal phalanx") AnnotationAssertion( "autopod digit 3 proximal phalanx") AnnotationAssertion( "digit III P1") AnnotationAssertion(Annotation( "PHENOSCAPE:wd") "digit III-1") AnnotationAssertion( "proximal phalanx of 3rd digit") AnnotationAssertion( "proximal phalanx of 3rd digit of autopod") AnnotationAssertion(Annotation( ) Annotation( ) "proximal phalanx of digit III") AnnotationAssertion( "proximal phalanx of middle digit") AnnotationAssertion( "proximal phalanx of third digit") AnnotationAssertion( "proximal phalanx of third digit of autopod") AnnotationAssertion( "third digit proximal phalanx") AnnotationAssertion( "third proximal phalanx of autopod") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0014503") AnnotationAssertion(rdfs:label "proximal phalanx of digit 3") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (proximal phalanx of digit 4) AnnotationAssertion(Annotation( ) "A proximal phalanx that is part of a autopod digit 4 [Automatically generated definition].") AnnotationAssertion( "4th digit of autopod proximal phalanx") AnnotationAssertion( "4th digit proximal phalanx") AnnotationAssertion( "autopod digit 4 proximal phalanx") AnnotationAssertion( "digit IV P1") AnnotationAssertion(Annotation( "PHENOSCAPE:wd") "digit IV-1") AnnotationAssertion( "fourth digit proximal phalanx") AnnotationAssertion( "fourth proximal phalanx of autopod") AnnotationAssertion( "proximal phalanx of 4th digit") AnnotationAssertion( "proximal phalanx of 4th digit of autopod") AnnotationAssertion(Annotation( ) Annotation( ) "proximal phalanx of digit IV") AnnotationAssertion( "proximal phalanx of fourth digit") AnnotationAssertion( "proximal phalanx of fourth digit of autopod") AnnotationAssertion( "proximal phalanx of ring digit") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0014504") AnnotationAssertion(rdfs:label "proximal phalanx of digit 4") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (proximal phalanx of digit 5) AnnotationAssertion(Annotation( ) "A proximal phalanx that is part of a autopod digit 5 [Automatically generated definition].") AnnotationAssertion( "5th digit of autopod proximal phalanx") AnnotationAssertion( "5th digit proximal phalanx") AnnotationAssertion( "autopod digit 5 proximal phalanx") AnnotationAssertion( "digit V P1") AnnotationAssertion(Annotation( "PHENOSCAPE:wd") "digit V-1") AnnotationAssertion( "fifth digit proximal phalanx") AnnotationAssertion( "fifth proximal phalanx of autopod") AnnotationAssertion( "proximal phalanx of 5th digit") AnnotationAssertion( "proximal phalanx of 5th digit of autopod") AnnotationAssertion(Annotation( ) Annotation( ) "proximal phalanx of digit V") AnnotationAssertion( "proximal phalanx of fifth digit") AnnotationAssertion( "proximal phalanx of fifth digit of autopod") AnnotationAssertion( "proximal phalanx of little digit") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0014505") AnnotationAssertion(rdfs:label "proximal phalanx of digit 5") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (distal interphalangeal joint of digit 3) AnnotationAssertion(Annotation( ) "A distal inter-phalangeal joint that is part of the 3rd digit.") AnnotationAssertion( "In Equidae, this is known as the coffin joint, and is the articulation between the short pastern bone (P2) and the coffin bone (P3 / distal phalanx)") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "NCIT:C102292") AnnotationAssertion(Annotation( ) Annotation( ) "distal interphalangeal joint of digit III") AnnotationAssertion(Annotation( ) Annotation( "NCBITaxon:9788"^^xsd:string) "coffin joint") AnnotationAssertion(Annotation( ) Annotation( "NCBITaxon:9788"^^xsd:string) "equine distal interphalangeal joint") AnnotationAssertion(Annotation( ) Annotation( "NCBITaxon:9788"^^xsd:string) "equine second interphalangeal joint of limb digit III") AnnotationAssertion( "uberon") AnnotationAssertion( "distal interphalangeal joint 3") AnnotationAssertion( "UBERON:0014506") AnnotationAssertion(rdfs:label "distal interphalangeal joint of digit 3") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (distal interphalangeal joint of pedal digit 3) AnnotationAssertion(Annotation( ) "A distal inter-phalangeal joint that is part of the 3rd pedal digit.") AnnotationAssertion( ) AnnotationAssertion( "FMA:35375") AnnotationAssertion(Annotation( ) Annotation( ) "distal interphalangeal joint of pedal digit III") AnnotationAssertion(Annotation( "FMA:35375") "distal interphalangeal joint of third digit of foot") AnnotationAssertion(Annotation( "FMA:35375") "distal interphalangeal joint of third toe") AnnotationAssertion(Annotation( ) Annotation( "NCBITaxon:9788"^^xsd:string) "equine distal interphalangeal joint of hindlimb") AnnotationAssertion(Annotation( ) Annotation( "NCBITaxon:9788"^^xsd:string) "hindlimb coffin joint") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0014507") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "distal interphalangeal joint of pedal digit 3") SubClassOf( ) SubClassOf( ) # Class: (distal interphalangeal joint of manual digit 3) AnnotationAssertion(Annotation( ) "A distal inter-phalangeal joint that is part of the 3rd manual digit.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:35337") AnnotationAssertion(Annotation( ) Annotation( ) "distal interphalangeal joint of manual digit III") AnnotationAssertion(Annotation( "FMA:35337") "distal interphalangeal joint of middle finger") AnnotationAssertion(Annotation( ) Annotation( "NCBITaxon:9788"^^xsd:string) "equine distal interphalangeal joint of forelimb") AnnotationAssertion(Annotation( ) Annotation( "NCBITaxon:9788"^^xsd:string) "equine second interphalangeal joint of forelimb digit III") AnnotationAssertion(Annotation( ) Annotation( "NCBITaxon:9788"^^xsd:string) "forelimb coffin joint") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0014508") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "distal interphalangeal joint of manual digit 3") SubClassOf( ) SubClassOf( ) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (anterodorsal nucleus of medial geniculate body) AnnotationAssertion(Annotation( "BIRNLEX:1600") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "ADMG") AnnotationAssertion( ) AnnotationAssertion( "BAMS:MGad") AnnotationAssertion( "BIRNLEX:1600") AnnotationAssertion( "HBA:4446") AnnotationAssertion(Annotation( "BIRNLEX:1600") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=852") AnnotationAssertion(Annotation( "BIRNLEX:1600") "anterodorsal nucleus of medial geniculate complex") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:852") "anterodorsal nucleus of the medial geniculate body") AnnotationAssertion(Annotation( "BIRNLEX:1600") "nucleus corporis geniculati medialis, pars anterodorsalis") AnnotationAssertion( "UBERON:0014521") AnnotationAssertion(rdfs:label "anterodorsal nucleus of medial geniculate body") SubClassOf( ) SubClassOf(Annotation( "NIFSTD"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (dorsolateral oculomotor nucleus) AnnotationAssertion( ) AnnotationAssertion(Annotation( ) "dorsolateral nucleus of oculomotor nuclear complex") AnnotationAssertion(Annotation( ) "nucleus dorsalis nervi oculomotorii") AnnotationAssertion( "oculomotor nerve dorsolateral nucleus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0014522") AnnotationAssertion(rdfs:label "dorsolateral oculomotor nucleus") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (oculomotor division of oculomotor nuclear complex) AnnotationAssertion(Annotation( "ISBN:0471888893"^^xsd:string) "A division of oculomotor nuclear complex that exists in organisms with electric organs which is responsible for eye movements.") AnnotationAssertion( ) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0014523") AnnotationAssertion(rdfs:label "oculomotor division of oculomotor nuclear complex") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (electromotor division of oculomotor nuclear complex) AnnotationAssertion(Annotation( "ISBN:0471888893"^^xsd:string) "A division of oculomotor nuclear complex that exists in organisms with electric organs which has axons terminating in the electric organs.") AnnotationAssertion( ) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0014524") AnnotationAssertion(rdfs:label "electromotor division of oculomotor nuclear complex") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (limb of internal capsule of telencephalon) AnnotationAssertion( ) AnnotationAssertion( "FMA:61951") AnnotationAssertion(Annotation( "FMA:61951") "internal capsule subdivision") AnnotationAssertion( "limb of internal capsule") AnnotationAssertion(Annotation( "FMA:61951") "subdivision of internal capsule") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0014525") AnnotationAssertion(rdfs:label "limb of internal capsule of telencephalon") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (anterior limb of internal capsule) AnnotationAssertion(Annotation( "NLX:144257") "Portion of internal capsule lying between the lenticular nucleus and the head of the caudate nucleus.") AnnotationAssertion(Annotation( ) "The anterior limb of internal capsule (or frontal part) contains: (1) fibers running from the thalamus to the frontal lobe; (2) fibers connecting the lentiform and caudate nuclei; (3) fibers connecting the cortex with the corpus striatum; and (4) fibers passing from the frontal lobe through the medial fifth of the base of the cerebral peduncle to the nuclei pontis[Wikipedia:Anterior_limb_of_internal_capsule].") AnnotationAssertion( "the streaming fibers of the anterior internal capsule separate the caudate nucleus and putamen in the human brain (in the mouse brain the caudoputamen is continuous)[ISBN:0123813611]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:aic") AnnotationAssertion( "DHBA:10582") AnnotationAssertion( "FMA:61952") AnnotationAssertion( "NLX:144257") AnnotationAssertion(Annotation( "FMA:61952") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "capsula interna, pars anterior") AnnotationAssertion(Annotation( "FMA:61952") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "crus anterius capsulae internae") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "ISBN:0123813611"^^xsd:string) "anterior internal capsule") AnnotationAssertion(Annotation( ) "anterior limb") AnnotationAssertion( "UBERON:0014526") AnnotationAssertion(rdfs:label "anterior limb of internal capsule") SubClassOf(Annotation( "FMA"^^xsd:string) ) DisjointClasses(Annotation( "lexical"^^xsd:string) ) # Class: (posterior limb of internal capsule) AnnotationAssertion(Annotation( "NLX:144258") "Portion of internal capsule lying between the globus pallidus and the thalamus (Nolte, The Human Brain, 6th ed., 2009, pg 409, modified by MM).") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:pic") AnnotationAssertion( "DHBA:10584") AnnotationAssertion( "FMA:61954") AnnotationAssertion( "NLX:144258") AnnotationAssertion(Annotation( "FMA:61954") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "capsula interna, pars posterior") AnnotationAssertion(Annotation( "FMA:61954") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "crus posterius capsulae internae") AnnotationAssertion( "uberon") AnnotationAssertion( "posterior internal capsule") AnnotationAssertion(Annotation( ) "posterior limb") AnnotationAssertion(Annotation( "BAMS:pic") "posterior limb of the internal capsule") AnnotationAssertion( "UBERON:0014527") AnnotationAssertion(rdfs:label "posterior limb of internal capsule") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (extreme capsule) AnnotationAssertion(Annotation( "NLXANAT:1010014") "Thin band of fibers separating the claustrum from the insular cortex.") AnnotationAssertion(Annotation( "FMA:61960") "Extreme capsule is an organ subdivision of the telencephalon which is made up primarily of myelinated axonal neural tissue (white matter). The extreme capsule is a sheet-like fiber bundle located lateral to the clausturm and medial to the insula which projects dorsally to the white matter underlying the cerebral cortex[FMA:61960].") AnnotationAssertion(Annotation( "Wikipedia:Extreme_capsule, Wikipedia:Extreme_capsule") "The extreme capsule is a long association fiber pathway of white matter in the brain that provides bidirectional communication between such areas as the claustrum and the insular cortex, and the inferior frontal gyrus and the middle-posterior portion of the superior temporal gyrus. Its fibers are near to but can be distinguished by MRI tractography from adjacent fiber bundles such as the uncinate fasciculus, the external capsule, the arcuate fascicle, and the medial, inferior and superior longitudinal fascicles. Given its bidirectional connection between the Broca's and Werniche's speech areas it could have a role in language[Wikipedia:Extreme_capsule, Wikipedia:Extreme_capsule].") AnnotationAssertion(Annotation( "NLXANAT:1010014") "Thin band of fibers separating the claustrum from the insular cortex") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:ex") AnnotationAssertion( "BAMS:exc") AnnotationAssertion( "DHBA:10574") AnnotationAssertion( "FMA:61960") AnnotationAssertion( "HBA:9246") AnnotationAssertion( "NLXANAT:1010014") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "band of Baillarger") AnnotationAssertion(Annotation( ) "capsula extrema") AnnotationAssertion( "UBERON:0014528") AnnotationAssertion(rdfs:label "extreme capsule") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (lenticular fasciculus) AnnotationAssertion(Annotation( ) "The lenticular fasciculus is a tract connecting the globus pallidus to the Thalamic fasciculus. The thalamic fasciculus (composed of the lenticular fasciculus and ansa lenticularis) runs into the Thalamus. It connects the globus pallidus to the thalamus.") AnnotationAssertion(Annotation( "FMA"^^xsd:string) "FMA appears to divide this into diencephalon and telencephalon parts") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:lenf_(H2)") AnnotationAssertion( "DHBA:10585") AnnotationAssertion( "FMA:61976") AnnotationAssertion( "FMA:62067") AnnotationAssertion( "HBA:265505158") AnnotationAssertion( "NLXANAT:1010015") AnnotationAssertion(Annotation( "FMA:61976") "dorsal division of ansa lenticularis") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) "fasciculus lenticularis") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) "fasciculus lenticularis [h2]") AnnotationAssertion(Annotation( "FMA:62067") "forel's field h2") AnnotationAssertion(Annotation( "FMA:61976") "lenticular fasciculus") AnnotationAssertion(Annotation( "NLXANAT:1010015") "lenticular fasciculus") AnnotationAssertion(Annotation( "FMA:62067") "lenticular fasciculus [h2]") AnnotationAssertion(Annotation( "FMA:62067") "lenticular fasciculus of diencephalon") AnnotationAssertion(Annotation( "FMA:61976") "lenticular fasciculus of telencephalon") AnnotationAssertion(Annotation( "FMA:62067") "tegmental area h2") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NLXANAT:1010015") "Forel's field H2") AnnotationAssertion(Annotation( ) Annotation( ) "fasciculus lenticularis") AnnotationAssertion(Annotation( "NLXANAT:1010015") "field H2") AnnotationAssertion(Annotation( "NLXANAT:1010015") "field H2 of Forel") AnnotationAssertion( "UBERON:0014529") AnnotationAssertion(rdfs:label "lenticular fasciculus") SubClassOf( ) # Class: (white matter lamina of neuraxis) AnnotationAssertion(Annotation( "FMA:83856") "lamina of neuraxis") AnnotationAssertion(Annotation( "FMA:83856") "neuraxis lamina") AnnotationAssertion( "FMA:83856") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0014530") AnnotationAssertion(rdfs:label "white matter lamina of neuraxis") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (white matter lamina of diencephalon) AnnotationAssertion(Annotation( "FMA:62449") "diencephalon lamina") AnnotationAssertion(Annotation( "FMA:62449") "lamina of diencephalon") AnnotationAssertion( "FMA:62449") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0014531") AnnotationAssertion(rdfs:label "white matter lamina of diencephalon") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (white matter lamina of cerebral hemisphere) AnnotationAssertion(Annotation( "FMA:67951") "cerebral hemisphere lamina") AnnotationAssertion(Annotation( "FMA:67951") "lamina of cerebral hemisphere") AnnotationAssertion( "FMA:67951") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0014532") AnnotationAssertion(rdfs:label "white matter lamina of cerebral hemisphere") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (medullary lamina of thalamus) AnnotationAssertion(Annotation( ) "Medullary laminae of thalamus are layers of myelinated fibres that appear on cross sections of the thalamus. They also are commonly referred to as laminae medullares thalami or medullary layers of thalamus. The specific layers are: Lamina medullaris lateralis (external medullary lamina) - separates ventral and lateral thalamus from the subthalamus and thalamic reticular nucleus; Lamina medullaris medialis (internal medullary lamina) - positioned between the dorsomedial and ventral nuclei of thalamus, encloses the intralaminar nuclei (centromedian nucleus, paracentral, and central lateral).") AnnotationAssertion( ) AnnotationAssertion( "BAMS:Lam.med.thal") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "external medullary lamina") AnnotationAssertion(Annotation( ) "internal medullary lamina") AnnotationAssertion(Annotation( ) "laminae medullares thalami") AnnotationAssertion(Annotation( ) "medullary layer of thalamus") AnnotationAssertion(Annotation( ) "medullary layers of thalamus") AnnotationAssertion( "UBERON:0014533") AnnotationAssertion(rdfs:label "medullary lamina of thalamus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (external medullary lamina of thalamus) AnnotationAssertion(Annotation( ) "A medullary lamina that separates ventral and lateral thalamus from the subthalamus and thalamic reticular nucleus.") AnnotationAssertion(Annotation( ) "lamina medullaris lateralis") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:em") AnnotationAssertion( "BAMS:eml") AnnotationAssertion( "DHBA:12038") AnnotationAssertion( "FMA:62078") AnnotationAssertion( "HBA:265505098") AnnotationAssertion( "MBA:1092") AnnotationAssertion(Annotation( "FMA:62078") "external medullary lamina") AnnotationAssertion(Annotation( "FMA:62078") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "lamella medullaris externa") AnnotationAssertion(Annotation( "FMA:62078") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "lamina medullaris externa") AnnotationAssertion(Annotation( "FMA:62078") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "lamina medullaris externa thalami") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) Annotation( ) "lamina medullaris lateralis thalami") AnnotationAssertion(Annotation( "FMA:62078") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "lamina medullaris thalami externa") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BAMS:em") "external medullary lamina of the thalamus") AnnotationAssertion(Annotation( "BAMS:eml") "external medullary lamina of the thalamus") AnnotationAssertion( "UBERON:0014534") AnnotationAssertion(rdfs:label "external medullary lamina of thalamus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (periamygdaloid cortex) AnnotationAssertion(Annotation( "NLX:144210") "Is located ventral to the basal nucleus and has three subdivisions: the periamygdaloid cortex, the medial division, and the sulcal division.") AnnotationAssertion( ) AnnotationAssertion( "BAMS:PAC") AnnotationAssertion( "NLX:144210") AnnotationAssertion(Annotation( "NLX:144210") "periamygdaloid cortex") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NLX:144210") "periamygdaloid area") AnnotationAssertion( "UBERON:0014537") AnnotationAssertion(rdfs:label "periamygdaloid cortex") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "NIFSTD"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "NIFSTD"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (subdivision of spinal cord central canal) AnnotationAssertion(Annotation( ) "A subdivision of the central canal of the spinal cord along its anterior-posterior axis. This is typically subdivided into cervical, thoracic, lumbar and sacral segments.") AnnotationAssertion( "BIRNLEX:717") AnnotationAssertion(Annotation( "BIRNLEX:717") Annotation( ) "regional part of spinal cord central canal") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0014538") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "subdivision of spinal cord central canal") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (precommissural fornix of forebrain) AnnotationAssertion(Annotation( ) Annotation( "BIRNLEX:1033") "Part of fornix extending from the body that curves ventrally rostral to the crossing of the anterior commissure ending in the septal nuclei.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:fpr") AnnotationAssertion( "BAMS:fxpr") AnnotationAssertion( "BAMS:pcf") AnnotationAssertion( "BAMS:pcfx") AnnotationAssertion( "BIRNLEX:1033") AnnotationAssertion( "FMA:61967") AnnotationAssertion(Annotation( "BIRNLEX:1033") "UMLS:C0175237") AnnotationAssertion(Annotation( "FMA:61967") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "fornix precommissuralis") AnnotationAssertion(Annotation( "BIRNLEX:1033") "precommissural fornix") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0014539") AnnotationAssertion(rdfs:label "precommissural fornix of forebrain") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (white matter lamina of cerebellum) AnnotationAssertion(Annotation( ) "The white laminae of cerebellum is subdivision of the cerebellar cortex comprised of myelinated axons lying deep to the granule cell layer of the cerebellar cortex.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:1105") AnnotationAssertion(Annotation( "BIRNLEX:1105") "UMLS:C0228472") AnnotationAssertion(Annotation( "BIRNLEX:1105") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=163") AnnotationAssertion( "lamina alba of cerebellar cortex") AnnotationAssertion( "laminae albae of cerebellar cortex") AnnotationAssertion( "white lamina of cerebellum") AnnotationAssertion(Annotation( "BIRNLEX:1105") Annotation( ) "white laminae of cerebellum") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:163") Annotation( ) "isthmus cinguli") AnnotationAssertion(Annotation( "NeuroNames:163") Annotation( ) "isthmus gyri cingulatus") AnnotationAssertion(Annotation( "NeuroNames:163") Annotation( ) "isthmus gyri cinguli") AnnotationAssertion(Annotation( "NeuroNames:163") Annotation( ) "isthmus of gyrus fornicatus") AnnotationAssertion(Annotation( "NeuroNames:163") "isthmus of the cingulate gyrus") AnnotationAssertion(Annotation( "NeuroNames:163") Annotation( ) "isthmus-2") AnnotationAssertion(Annotation( "BIRNLEX:1105") Annotation( ) "laminae albae of cerebellar cortex") AnnotationAssertion( "UBERON:0014540") AnnotationAssertion(rdfs:label "white matter lamina of cerebellum") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (thoracic division of spinal cord central canal) AnnotationAssertion(Annotation( "BIRNLEX:1395") "Part of spinal cord central canal contained in the thoracic spinal cord. It is continuous rostrally with the cervical spinal cord central canal and caudally with the lumbar spinal cord central canal.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:1395") AnnotationAssertion( "FMA:321588") AnnotationAssertion(Annotation( "BIRNLEX:1395") "UMLS:C0228637") AnnotationAssertion(Annotation( "BIRNLEX:1395") Annotation( ) "thoracic spinal cord central canal") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0014541") AnnotationAssertion(rdfs:label "thoracic division of spinal cord central canal") SubClassOf(Annotation( "NIFSTD"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (cervical division of cord spinal central canal) AnnotationAssertion(Annotation( "BIRNLEX:1511") "Part of central canal contained within the cervical spinal cord. It is continuous caudally with the thoracic spinal cord central canal and rostrally with the fourth ventricle of the brain via the obex.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:1511") AnnotationAssertion( "FMA:321590") AnnotationAssertion(Annotation( "BIRNLEX:1511") "UMLS:C0228620") AnnotationAssertion(Annotation( "BIRNLEX:1511") Annotation( ) "cervical spinal cord central canal") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0014542") AnnotationAssertion(rdfs:label "cervical division of cord spinal central canal") SubClassOf(Annotation( "NIFSTD"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lumbar division of spinal cord central canal) AnnotationAssertion(Annotation( "BIRNLEX:1604") "Part of central canal lying within the lumbar spinal cord. It is continuous rostrally with the central canal of the thoracic spinal cord and caudally with the central canal of the sacral spinal cord.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:1604") AnnotationAssertion( "FMA:321589") AnnotationAssertion(Annotation( "BIRNLEX:1604") "UMLS:C0228644") AnnotationAssertion(Annotation( "BIRNLEX:1604") Annotation( ) "lumbar spinal cord central canal") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0014543") AnnotationAssertion(rdfs:label "lumbar division of spinal cord central canal") SubClassOf(Annotation( "NIFSTD"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (frontomarginal sulcus) AnnotationAssertion(Annotation( "BIRNLEX:4000") "A superficial feature of the human frontal lobe; it is located at the rostral margin of the orbital surface of the lobe (Ono-90). (NN).") AnnotationAssertion(Annotation( "BIRNLEX:4000") Annotation( "NIFSTD:SumsDB_abbrevSource"^^xsd:string) Annotation( ) "FMS") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:frs") AnnotationAssertion( "BIRNLEX:4000") AnnotationAssertion( "DHBA:146034792") AnnotationAssertion( "HBA:9363") AnnotationAssertion(Annotation( "BIRNLEX:4000") "UMLS:C0262269") AnnotationAssertion(Annotation( "BIRNLEX:4000") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=1614") AnnotationAssertion(Annotation( "BIRNLEX:4000") Annotation( ) "frontomarginal sulcus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BAMS:frs") "fronto marginal sulcus") AnnotationAssertion(Annotation( "NeuroNames:1614") Annotation( ) "sulcus fronto-marginalis") AnnotationAssertion(Annotation( "BIRNLEX:4000") "sulcus frontomarginalis") AnnotationAssertion( "UBERON:0014544") AnnotationAssertion(rdfs:label "frontomarginal sulcus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (sacral division of spinal cord central canal) AnnotationAssertion(Annotation( "NLXANAT:1010008") "Part of spinal cord central canal contained in the sacral spinal cord. It is continuous rostrally with the spinal cord central canal of the lumbar cord.") AnnotationAssertion( ) AnnotationAssertion( "FMA:321696") AnnotationAssertion( "NLXANAT:1010008") AnnotationAssertion(Annotation( "NLXANAT:1010008") Annotation( ) "sacral spinal cord central canal") AnnotationAssertion( "uberon") AnnotationAssertion( "lumbosacral spinal cord central canal") AnnotationAssertion( "UBERON:0014547") AnnotationAssertion(rdfs:label "sacral division of spinal cord central canal") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pyramidal layer of CA1) AnnotationAssertion(Annotation( "BIRNLEX:4110") "CA1 part of stratum pyramidale hippocampi.") AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:4110") AnnotationAssertion( "DMBA:16133") AnnotationAssertion( "EMAPA:35196") AnnotationAssertion( "FMA:277868") AnnotationAssertion( "MA:0003186") AnnotationAssertion( "MBA:407") AnnotationAssertion( "PBA:10060") AnnotationAssertion(Annotation( "BIRNLEX:4110") Annotation( ) "CA1 part of stratum pyramidale hippocampi") AnnotationAssertion(Annotation( "BIRNLEX:4110") "CA1 stratum pyramidale hippocampi") AnnotationAssertion(Annotation( "ABA:CA1sp") "field CA1, pyramidal layer") AnnotationAssertion(Annotation( "PBA:10060") "stratum pyramidale of CA1") AnnotationAssertion(Annotation( "NeuroNames:2940") "stratum pyramidale of the CA1 field") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BIRNLEX:4110") "CA1 pyramidal cell layer") AnnotationAssertion(Annotation( "BIRNLEX:4110") "CA1 stratum pyramidale") AnnotationAssertion(Annotation( "BIRNLEX:4110") "CA1 stratum pyramidale hippocampi") AnnotationAssertion( "UBERON:0014548") AnnotationAssertion(rdfs:label "pyramidal layer of CA1") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "NN-text") ObjectSomeValuesFrom( )) # Class: (pyramidal layer of CA2) AnnotationAssertion(Annotation( "BIRNLEX:4111") "Part of pyramidal cell layer in area CA2, lying superficial to the CA2 stratum oriens, and deep to the stratum radiatum of CA2, continuous with the pyramidal cell layers of CA1 and CA3.") AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:4111") AnnotationAssertion( "EMAPA:36480") AnnotationAssertion( "FMA:277870") AnnotationAssertion( "MBA:446") AnnotationAssertion( "PBA:10065") AnnotationAssertion(Annotation( "BIRNLEX:4111") Annotation( ) "CA2 part of stratum pyramidale hippocampi") AnnotationAssertion(Annotation( "BIRNLEX:4111") "CA2 stratum pyramidale hippocampi") AnnotationAssertion(Annotation( "ABA:CA2sp") "field CA2, pyramidal layer") AnnotationAssertion(Annotation( "PBA:10065") "stratum pyramidale of CA2") AnnotationAssertion(Annotation( "NeuroNames:2945") "stratum pyramidale of the CA2 field") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0014549") AnnotationAssertion(rdfs:label "pyramidal layer of CA2") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "NN-text") ObjectSomeValuesFrom( )) # Class: (pyramidal layer of CA3) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A layer of hippocampal field that is part of a hippocampus pyramidal layer and is part of a CA3 field of hippocampus.") AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:4112") AnnotationAssertion( "EMAPA:36448") AnnotationAssertion( "FMA:277872") AnnotationAssertion( "MBA:495") AnnotationAssertion( "PBA:10070") AnnotationAssertion(Annotation( "BIRNLEX:4112") Annotation( ) "CA3 part of stratum pyramidale hippocampi") AnnotationAssertion(Annotation( "BIRNLEX:4112") "CA3 stratum pyramidale hippocampi") AnnotationAssertion(Annotation( "ABA:CA3sp") "field CA3, pyramidal layer") AnnotationAssertion(Annotation( "PBA:10070") "stratum pyramidale of CA3") AnnotationAssertion(Annotation( "NeuroNames:2950") "stratum pyramidale of the CA3 field") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0014550") AnnotationAssertion(rdfs:label "pyramidal layer of CA3") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "NN-text") ObjectSomeValuesFrom( )) # Class: (CA2 stratum oriens) AnnotationAssertion(Annotation( "BIRNLEX:4115") Annotation( "UBERON:cjm"^^xsd:string) "Part of stratum oriens lying in area CA2 deep to the CA2 pyramidal cell layer and continuous with stratum oriens of area CA2 and bounded by the dentate gyrus hilus[Modified from NIFSTD by CJM].") AnnotationAssertion( ) AnnotationAssertion( "BAMS:so") AnnotationAssertion( "BIRNLEX:4115") AnnotationAssertion( "DMBA:16138") AnnotationAssertion( "FMA:277858") AnnotationAssertion( "MBA:438") AnnotationAssertion( "PBA:10064") AnnotationAssertion(Annotation( "BIRNLEX:4115") Annotation( ) "CA2 part of stratum oriens") AnnotationAssertion(Annotation( "BIRNLEX:4115") "CA2 stratum oriens") AnnotationAssertion(Annotation( "FMA:277858") "oriens layer of CA2 field") AnnotationAssertion(Annotation( "NeuroNames:2944") "stratum oriens of the CA2 field") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0014551") AnnotationAssertion(rdfs:label "CA2 stratum oriens") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (CA1 stratum oriens) AnnotationAssertion(Annotation( "BIRNLEX:4116") "Part of stratum oriens lying in area CA1, superficial to the alveus of CA1 and deep to the pyramidal cell layer of CA1. It is continuous with the stratum oriens of CA2 and bounded by the subiculum.") AnnotationAssertion( ) AnnotationAssertion( "BAMS:so") AnnotationAssertion( "BIRNLEX:4116") AnnotationAssertion( "DMBA:16132") AnnotationAssertion( "FMA:277856") AnnotationAssertion( "MBA:399") AnnotationAssertion( "PBA:10059") AnnotationAssertion(Annotation( "BIRNLEX:4116") Annotation( ) "CA1 part of stratum oriens") AnnotationAssertion(Annotation( "BIRNLEX:4116") "CA1 stratum oriens") AnnotationAssertion(Annotation( "FMA:277856") "oriens layer of CA1 field") AnnotationAssertion(Annotation( "NeuroNames:2939") "stratum oriens of the CA1 field") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0014552") AnnotationAssertion(rdfs:label "CA1 stratum oriens") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (CA3 stratum oriens) AnnotationAssertion(Annotation( "BIRNLEX:4117") "Part of stratum oriens lying in area CA3 deep to the CA3 pyramidal cell layer and continuous with stratum oriens of area CA2 and bounded by the dentate gyrus hilus.") AnnotationAssertion( ) AnnotationAssertion( "BAMS:so") AnnotationAssertion( "BIRNLEX:4117") AnnotationAssertion( "DMBA:16142") AnnotationAssertion( "FMA:277860") AnnotationAssertion( "MBA:486") AnnotationAssertion( "PBA:10069") AnnotationAssertion(Annotation( "BIRNLEX:4117") Annotation( ) "CA3 part of stratum oriens") AnnotationAssertion(Annotation( "BIRNLEX:4117") "CA3 stratum oriens") AnnotationAssertion(Annotation( "FMA:277860") "oriens layer of CA3 field") AnnotationAssertion(Annotation( "NeuroNames:2949") "stratum oriens of the CA3 field") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0014553") AnnotationAssertion(rdfs:label "CA3 stratum oriens") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (CA1 stratum radiatum) AnnotationAssertion(Annotation( "BIRNLEX:4119") "Part of stratum radiatum lying in area CA1, superficial to the CA1 pyramidal cell layer and deep to the CA1 stratum lucidum-moleculare, continuous with the stratum radiatum of CA2 and bounded by the subiculum. It contains the Schaffer collateral projection from CA3.") AnnotationAssertion( ) AnnotationAssertion( "BAMS:sr") AnnotationAssertion( "BIRNLEX:4119") AnnotationAssertion( "DMBA:16134") AnnotationAssertion( "FMA:277862") AnnotationAssertion( "MBA:415") AnnotationAssertion( "PBA:10061") AnnotationAssertion(Annotation( "BIRNLEX:4119") Annotation( ) "CA1 part of stratum radiatum") AnnotationAssertion(Annotation( "BIRNLEX:4119") "CA1 stratum radiatum") AnnotationAssertion(Annotation( "FMA:277862") "radiate layer of CA1 field") AnnotationAssertion(Annotation( "NeuroNames:2941") "stratum radiatum of the CA1 field") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0014554") AnnotationAssertion(rdfs:label "CA1 stratum radiatum") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (CA2 stratum radiatum) AnnotationAssertion(Annotation( "BIRNLEX:4120") "Part of stratum radiatum in area CA2, lying superficial to the pyramidal cell layer and deep to CA2 stratum lacunosum-moleculare, continuous with the stratum radiatum of CA1 and CA3.") AnnotationAssertion( ) AnnotationAssertion( "BAMS:sr") AnnotationAssertion( "BIRNLEX:4120") AnnotationAssertion( "DMBA:16140") AnnotationAssertion( "FMA:277864") AnnotationAssertion( "MBA:454") AnnotationAssertion( "PBA:10066") AnnotationAssertion(Annotation( "BIRNLEX:4120") Annotation( ) "CA2 part of stratum radiatum") AnnotationAssertion(Annotation( "BIRNLEX:4120") "CA2 stratum radiatum") AnnotationAssertion(Annotation( "FMA:277864") "radiate layer of CA2 field") AnnotationAssertion(Annotation( "NeuroNames:2946") "stratum radiatum of the CA2 field") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0014555") AnnotationAssertion(rdfs:label "CA2 stratum radiatum") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (CA3 stratum radiatum) AnnotationAssertion(Annotation( "BIRNLEX:4121") "Part of stratum radiatum in area CA3, lying superficial to the stratum lucidum and deep to CA3 stratum lacunosum-moleculare.") AnnotationAssertion( ) AnnotationAssertion( "BAMS:sr") AnnotationAssertion( "BIRNLEX:4121") AnnotationAssertion( "DMBA:16145") AnnotationAssertion( "FMA:277866") AnnotationAssertion( "MBA:504") AnnotationAssertion( "PBA:10072") AnnotationAssertion(Annotation( "BIRNLEX:4121") Annotation( ) "CA3 part of stratum radiatum") AnnotationAssertion(Annotation( "BIRNLEX:4121") "CA3 stratum radiatum") AnnotationAssertion(Annotation( "FMA:277866") "radiate layer of CA3 field") AnnotationAssertion(Annotation( "NeuroNames:2952") "stratum radiatum of the CA3 field") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0014556") AnnotationAssertion(rdfs:label "CA3 stratum radiatum") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (CA1 stratum lacunosum moleculare) AnnotationAssertion(Annotation( "BIRNLEX:4123") "Part of stratum lacunosum-moleculare lying in area CA1, superficial to CA1 stratum radiatum and bounded by the pial surface, continuous with stratum lacunosum-moleculare of CA2 and the subiculum stratum moleculare.") AnnotationAssertion( ) AnnotationAssertion( "BAMS:slm") AnnotationAssertion( "BIRNLEX:4123") AnnotationAssertion( "DMBA:16135") AnnotationAssertion( "FMA:277850") AnnotationAssertion( "MBA:391") AnnotationAssertion( "PBA:10062") AnnotationAssertion(Annotation( "BIRNLEX:4123") Annotation( ) "CA1 part of stratum lacunosum moleculare") AnnotationAssertion(Annotation( "BIRNLEX:4123") "CA1 stratum lacunosum moleculare") AnnotationAssertion(Annotation( "FMA:277850") "lacunar-molecular layer of CA1 field") AnnotationAssertion(Annotation( "NeuroNames:2942") "stratum lacunosum moleculare of the CA1 field") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0014557") AnnotationAssertion(rdfs:label "CA1 stratum lacunosum moleculare") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (CA2 stratum lacunosum moleculare) AnnotationAssertion(Annotation( "BIRNLEX:4124") "Part of stratum lacunosum-moleculare lying in area CA2, superficial to the CA2 stratum radiatum, that is continuous with the stratum lacunosum-moleculare in areas CA3 and CA1.") AnnotationAssertion( ) AnnotationAssertion( "BAMS:slm") AnnotationAssertion( "BIRNLEX:4124") AnnotationAssertion( "DMBA:16137") AnnotationAssertion( "FMA:277852") AnnotationAssertion( "MBA:431") AnnotationAssertion( "PBA:10067") AnnotationAssertion(Annotation( "BIRNLEX:4124") Annotation( ) "CA2 part of stratum lacunosum moleculare") AnnotationAssertion(Annotation( "BIRNLEX:4124") "CA2 stratum lacunosum moleculare") AnnotationAssertion(Annotation( "FMA:277852") "lacunar-molecular layer of CA2 field") AnnotationAssertion(Annotation( "NeuroNames:2947") "stratum lacunosum moleculare of the CA2 field") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0014558") AnnotationAssertion(rdfs:label "CA2 stratum lacunosum moleculare") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (CA3 stratum lacunosum moleculare) AnnotationAssertion(Annotation( "BIRNLEX:4125") "Part of stratum lacunosum-moleculare in area CA3. It is bounded by the stratum lacunosum-moleculare of CA2 and CA1. It is bounded superficially by the pial surface and deep by the CA3 stratum radiatum. It is continuous with the stratum lacunosum-moleculare of CA2.") AnnotationAssertion( ) AnnotationAssertion( "BAMS:slm") AnnotationAssertion( "BIRNLEX:4125") AnnotationAssertion( "DMBA:16146") AnnotationAssertion( "FMA:277854") AnnotationAssertion( "MBA:471") AnnotationAssertion( "PBA:10073") AnnotationAssertion(Annotation( "BIRNLEX:4125") Annotation( ) "CA3 part of stratum lacunosum moleculare") AnnotationAssertion(Annotation( "BIRNLEX:4125") "CA3 stratum lacunosum moleculare") AnnotationAssertion(Annotation( "FMA:277854") "lacunar-molecular layer of CA3 field") AnnotationAssertion(Annotation( "NeuroNames:2953") "stratum lacunosum moleculare of the CA3 field") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0014559") AnnotationAssertion(rdfs:label "CA3 stratum lacunosum moleculare") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (CA3 stratum lucidum) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A layer of hippocampal field that is part of a CA3 field of hippocampus and is part of a hippocampus stratum lucidum.") AnnotationAssertion( ) AnnotationAssertion( "BAMS:slu") AnnotationAssertion( "DMBA:16144") AnnotationAssertion( "MBA:479") AnnotationAssertion( "NLXANAT:1005040") AnnotationAssertion( "PBA:10071") AnnotationAssertion(Annotation( "NLXANAT:1005040") "CA3 stratum lucidum") AnnotationAssertion(Annotation( "NeuroNames:2951") "stratum lucidum of the CA3 field") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0014560") AnnotationAssertion(rdfs:label "CA3 stratum lucidum") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (layer of hippocampal field) AnnotationAssertion(Annotation( ) Annotation( ) "A subdivision of a layer of the hippocampus (e.g. stratum moleculare) covering all or port of a hippocampal field (e.g. CA1).") AnnotationAssertion( "hippocampal field layer") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0014567") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "layer of hippocampal field") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (dorsal tegmental nucleus pars dorsalis) AnnotationAssertion(Annotation( "NLXANAT:20090407") "Part of dorsal tegmental nucleus characterized by round, small cells that are lightly stained in Nissl preparations.") AnnotationAssertion( "According to Hayakawa and Zuo (1983), the TDD cannot be clearly identified in the tree shrew or in human") AnnotationAssertion( "NLXANAT:20090407") AnnotationAssertion(Annotation( "NLXANAT:20090407") "dorsal tegmental nucleus pars dorsalis") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NLXANAT:20090407") "dorsal tegmental nucleus of Gudden pars dorsalis") AnnotationAssertion( "UBERON:0014568") AnnotationAssertion(rdfs:label "dorsal tegmental nucleus pars dorsalis") SubClassOf( ) SubClassOf(Annotation( "NIFSTD"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (dorsal tegmental nucleus pars ventralis) AnnotationAssertion(Annotation( "NLXANAT:20090408") "Cytoarchitectural part of the dorsal tegmental nucleus based on cell size. The pars ventralis is characterized by medium sized oval or triangular cells that stain darkly in NIssl stains.") AnnotationAssertion( "According to Hayakawa and Zuo (1983), the TDV cannot be clearly identified in the tree shrew or in human") AnnotationAssertion( "NLXANAT:20090408") AnnotationAssertion(Annotation( "NLXANAT:20090408") "dorsal tegmental nucleus pars ventralis") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NLXANAT:20090408") "dorsal tegmental nucleus of Gudden pars ventralis") AnnotationAssertion(Annotation( "NLXANAT:20090408") "pars ventralis of the dorsal tegmental nucleus") AnnotationAssertion(Annotation( "NLXANAT:20090408") "pars ventralis of the dorsal tegmental nucleus of Gudden") AnnotationAssertion( "UBERON:0014569") AnnotationAssertion(rdfs:label "dorsal tegmental nucleus pars ventralis") SubClassOf( ) SubClassOf(Annotation( "NIFSTD"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (CA1 alveus) AnnotationAssertion(Annotation( "NLXANAT:1005038") "CA1 portion of the alveus.") AnnotationAssertion( ) AnnotationAssertion( "FMA:277874") AnnotationAssertion( "NLXANAT:1005038") AnnotationAssertion(Annotation( "NeuroNames:2938") "alveus of the CA1 field") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0014570") AnnotationAssertion(rdfs:label "CA1 alveus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (CA3 alveus) AnnotationAssertion(Annotation( "NLXANAT:1005039") "Part of alveus lying within hippocampal sector CA3.") AnnotationAssertion( ) AnnotationAssertion( "FMA:277878") AnnotationAssertion( "NLXANAT:1005039") AnnotationAssertion(Annotation( "NeuroNames:2948") "alveus of the CA3 field") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0014571") AnnotationAssertion(rdfs:label "CA3 alveus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (anterior nucleus of hypothalamus anterior part) AnnotationAssertion(Annotation( "BIRNLEX:1109") Annotation( "NIFSTD:Swanson-rat-1998_abbrevSource") Annotation( ) "AHNa") AnnotationAssertion( ) AnnotationAssertion( "BAMS:AHNa") AnnotationAssertion( "BIRNLEX:1109") AnnotationAssertion( "MBA:700") AnnotationAssertion(Annotation( "BIRNLEX:1109") Annotation( ) "anterior nucleus of hypothalamus anterior part") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BAMS:AHNa") "anterior hypothalamic nucleus anterior part") AnnotationAssertion(Annotation( "BAMS:AHNa") "anterior hypothalamic nucleus, anterior part") AnnotationAssertion( "UBERON:0014589") AnnotationAssertion(rdfs:label "anterior nucleus of hypothalamus anterior part") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (anterior nucleus of hypothalamus central part) AnnotationAssertion(Annotation( "BIRNLEX:1119") Annotation( "NIFSTD:Swanson-rat-1998_abbrevSource") Annotation( ) "AHNc") AnnotationAssertion( ) AnnotationAssertion( "BAMS:AHC") AnnotationAssertion( "BAMS:AHNc") AnnotationAssertion( "BIRNLEX:1119") AnnotationAssertion( "MBA:708") AnnotationAssertion(Annotation( "BIRNLEX:1119") Annotation( ) "anterior nucleus of hypothalamus central part") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BAMS:AHC") "anterior hypothalamic area central part") AnnotationAssertion(Annotation( "BAMS:AHC") "anterior hypothalamic area, central part") AnnotationAssertion(Annotation( "BAMS:AHNc") "anterior hypothalamic central part") AnnotationAssertion(Annotation( "BAMS:AHNc") "anterior hypothalamic nucleus central part") AnnotationAssertion(Annotation( "BAMS:AHC") "anterior hypothalamic nucleus, central part") AnnotationAssertion(Annotation( "BAMS:AHNc") "anterior hypothalamic nucleus, central part") AnnotationAssertion( "UBERON:0014590") AnnotationAssertion(rdfs:label "anterior nucleus of hypothalamus central part") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (anterior nucleus of hypothalamus posterior part) AnnotationAssertion(Annotation( "BIRNLEX:1125") Annotation( "NIFSTD:Swanson-rat-1998_abbrevSource") Annotation( ) "AHNp") AnnotationAssertion( ) AnnotationAssertion( "BAMS:AHNp") AnnotationAssertion( "BIRNLEX:1125") AnnotationAssertion( "DMBA:16240") AnnotationAssertion( "MBA:724") AnnotationAssertion(Annotation( "BIRNLEX:1125") Annotation( ) "anterior nucleus of hypothalamus posterior part") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BAMS:AHNp") "anterior hypothalamic nucleus posterior part") AnnotationAssertion(Annotation( "BAMS:AHNp") "anterior hypothalamic nucleus, posterior part") AnnotationAssertion(Annotation( "BAMS:AHNp") "anterior hypothalamic posterior part") AnnotationAssertion( "UBERON:0014591") AnnotationAssertion(rdfs:label "anterior nucleus of hypothalamus posterior part") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (anterior nucleus of hypothalamus dorsal part) AnnotationAssertion(Annotation( "BIRNLEX:1139") Annotation( "NIFSTD:Swanson-rat-1998_abbrevSource") Annotation( ) "AHNd") AnnotationAssertion( ) AnnotationAssertion( "BAMS:AHD") AnnotationAssertion( "BAMS:AHNd") AnnotationAssertion( "BIRNLEX:1139") AnnotationAssertion( "MBA:716") AnnotationAssertion(Annotation( "BIRNLEX:1139") Annotation( ) "anterior nucleus of hypothalamus dorsal part") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BAMS:AHNd") "anterior hypothalamic dorsal part") AnnotationAssertion(Annotation( "BAMS:AHNd") "anterior hypothalamic nucleus dorsal part") AnnotationAssertion(Annotation( "BAMS:AHD") "anterior hypothalamic nucleus, dorsal part") AnnotationAssertion(Annotation( "BAMS:AHNd") "anterior hypothalamic nucleus, dorsal part") AnnotationAssertion( "UBERON:0014592") AnnotationAssertion(rdfs:label "anterior nucleus of hypothalamus dorsal part") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (tuberomammillary nucleus dorsal part) AnnotationAssertion(Annotation( "BIRNLEX:1290") Annotation( "NIFSTD:Swanson-rat-1998_abbrevSource") Annotation( ) "TMd") AnnotationAssertion( ) AnnotationAssertion( "BAMS:TMd") AnnotationAssertion( "BIRNLEX:1290") AnnotationAssertion( "MBA:1126") AnnotationAssertion(Annotation( "BIRNLEX:1290") Annotation( ) "tuberomammillary nucleus dorsal part") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BAMS:TMd") "tuberomammillary nucleus, dorsal part") AnnotationAssertion( "UBERON:0014593") AnnotationAssertion(rdfs:label "tuberomammillary nucleus dorsal part") SubClassOf( ) SubClassOf(Annotation( "NIFSTD"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (tuberomammillary nucleus ventral part) AnnotationAssertion(Annotation( "BIRNLEX:1294") Annotation( "NIFSTD:Swanson-rat-1998_abbrevSource") Annotation( ) "TMv") AnnotationAssertion( "BAMS:TMv") AnnotationAssertion( "BIRNLEX:1294") AnnotationAssertion( "MBA:1") AnnotationAssertion(Annotation( "BIRNLEX:1294") Annotation( ) "tuberomammillary nucleus ventral part") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0014594") AnnotationAssertion(rdfs:label "tuberomammillary nucleus ventral part") SubClassOf( ) SubClassOf(Annotation( "NIFSTD"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (paraventricular nucleus of the hypothalamus descending division - medial parvicellular part, ventral zone) AnnotationAssertion(Annotation( "BIRNLEX:1342") Annotation( "NIFSTD:Swanson-rat-1998_abbrevSource") Annotation( ) "PVHmpv") AnnotationAssertion( "BAMS:PVHmpv") AnnotationAssertion( "BIRNLEX:1342") AnnotationAssertion( "HBA:4576") AnnotationAssertion( "MBA:464") AnnotationAssertion(Annotation( "BIRNLEX:1342") Annotation( ) "paraventricular nucleus of the hypothalamus descending division - medial parvicellular part, ventral zone") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BAMS:PVHmpv") "paraventricular hypothalamic nucleus medial parvicellular part, ventral zone") AnnotationAssertion(Annotation( "BAMS:PVHmpv") "paraventricular hypothalamic nucleus, descending division, medial parvicellular part, ventral zone") AnnotationAssertion(Annotation( "BAMS:PVHmpv") "paraventricular nucleus of the hypothalamus, descending division, medial parvicellular part, ventral zone") AnnotationAssertion( "UBERON:0014595") AnnotationAssertion(rdfs:label "paraventricular nucleus of the hypothalamus descending division - medial parvicellular part, ventral zone") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (paraventricular nucleus of the hypothalamus descending division - dorsal parvicellular part) AnnotationAssertion(Annotation( "BIRNLEX:1348") Annotation( "NIFSTD:Swanson-rat-1998_abbrevSource") Annotation( ) "PVHdp") AnnotationAssertion( "BAMS:PVHdp") AnnotationAssertion( "BIRNLEX:1348") AnnotationAssertion( "HBA:4577") AnnotationAssertion( "MBA:439") AnnotationAssertion(Annotation( "BIRNLEX:1348") Annotation( ) "paraventricular nucleus of the hypothalamus descending division - dorsal parvicellular part") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BAMS:PVHdp") "paraventricular hypothalamic nucleus dorsal parvicellular part") AnnotationAssertion(Annotation( "BAMS:PVHdp") "paraventricular hypothalamic nucleus, descending division, dorsal parvicellular part") AnnotationAssertion(Annotation( "BAMS:PVHdp") "paraventricular nucleus of the hypothalamus, descending division, dorsal parvicellular part") AnnotationAssertion( "UBERON:0014596") AnnotationAssertion(rdfs:label "paraventricular nucleus of the hypothalamus descending division - dorsal parvicellular part") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (paraventricular nucleus of the hypothalamus descending division - lateral parvicellular part) AnnotationAssertion(Annotation( "BIRNLEX:1354") Annotation( "NIFSTD:Swanson-rat-1998_abbrevSource") Annotation( ) "PVHlp") AnnotationAssertion( "BAMS:PVHlp") AnnotationAssertion( "BIRNLEX:1354") AnnotationAssertion( "HBA:4578") AnnotationAssertion( "MBA:455") AnnotationAssertion(Annotation( "BIRNLEX:1354") Annotation( ) "paraventricular nucleus of the hypothalamus descending division - lateral parvicellular part") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BAMS:PVHlp") "paraventricular hypothalamic nucleus lateral parvicellular part") AnnotationAssertion(Annotation( "BAMS:PVHlp") "paraventricular hypothalamic nucleus, descending division, lateral parvicellular part") AnnotationAssertion(Annotation( "BAMS:PVHlp") "paraventricular nucleus of the hypothalamus, descending division, lateral parvicellular part") AnnotationAssertion( "UBERON:0014597") AnnotationAssertion(rdfs:label "paraventricular nucleus of the hypothalamus descending division - lateral parvicellular part") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (paraventricular nucleus of the hypothalamus descending division - forniceal part) AnnotationAssertion(Annotation( "BIRNLEX:1374") Annotation( "NIFSTD:Swanson-rat-1998_abbrevSource") Annotation( ) "PVHf") AnnotationAssertion( "BAMS:PVHf") AnnotationAssertion( "BIRNLEX:1374") AnnotationAssertion( "HBA:4579") AnnotationAssertion( "MBA:447") AnnotationAssertion(Annotation( "BIRNLEX:1374") Annotation( ) "paraventricular nucleus of the hypothalamus descending division - forniceal part") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BAMS:PVHf") "paraventricular hypothalamic nucleus forniceal part") AnnotationAssertion(Annotation( "BAMS:PVHf") "paraventricular hypothalamic nucleus, descending division, forniceal part") AnnotationAssertion(Annotation( "BAMS:PVHf") "paraventricular nucleus of the hypothalamus, descending division, forniceal part") AnnotationAssertion(Annotation( "BAMS:PVHf") "paraventricular nucleus of the hypothalamus, parvicellular division forniceal part") AnnotationAssertion( "UBERON:0014598") AnnotationAssertion(rdfs:label "paraventricular nucleus of the hypothalamus descending division - forniceal part") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (paraventricular nucleus of the hypothalamus magnocellular division - anterior magnocellular part) AnnotationAssertion(Annotation( "BIRNLEX:1384") Annotation( "NIFSTD:Swanson-rat-1998_abbrevSource") Annotation( ) "PVHam") AnnotationAssertion( "BAMS:PVHam") AnnotationAssertion( "BIRNLEX:1384") AnnotationAssertion( "HBA:4581") AnnotationAssertion( "MBA:47") AnnotationAssertion(Annotation( "BIRNLEX:1384") Annotation( ) "paraventricular nucleus of the hypothalamus magnocellular division - anterior magnocellular part") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BAMS:PVHam") "paraventricular hypothalamic nucleus anterior magnocellular part") AnnotationAssertion(Annotation( "BAMS:PVHam") "paraventricular hypothalamic nucleus, magnocellular division, anterior magnocellular part") AnnotationAssertion(Annotation( "BAMS:PVHam") "paraventricular nucleus of the hypothalamus, magnocellular division, anterior magnocellular part") AnnotationAssertion( "UBERON:0014599") AnnotationAssertion(rdfs:label "paraventricular nucleus of the hypothalamus magnocellular division - anterior magnocellular part") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (paraventricular nucleus of the hypothalamus magnocellular division - medial magnocellular part) AnnotationAssertion(Annotation( "BIRNLEX:1388") Annotation( "NIFSTD:Swanson-rat-1998_abbrevSource") Annotation( ) "PVHmm") AnnotationAssertion( "BAMS:PVHmm") AnnotationAssertion( "BIRNLEX:1388") AnnotationAssertion( "HBA:4582") AnnotationAssertion( "MBA:79") AnnotationAssertion(Annotation( "BIRNLEX:1388") Annotation( ) "paraventricular nucleus of the hypothalamus magnocellular division - medial magnocellular part") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BAMS:PVHmm") "paraventricular hypothalamic nucleus medial magnocellular part") AnnotationAssertion(Annotation( "BAMS:PVHmm") "paraventricular hypothalamic nucleus, magnocellular division, medial magnocellular part") AnnotationAssertion(Annotation( "BAMS:PVHmm") "paraventricular nucleus of the hypothalamus, magnocellular division, medial magnocellular part") AnnotationAssertion( "UBERON:0014600") AnnotationAssertion(rdfs:label "paraventricular nucleus of the hypothalamus magnocellular division - medial magnocellular part") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (paraventricular nucleus of the hypothalamus magnocellular division - posterior magnocellular part) AnnotationAssertion(Annotation( "BIRNLEX:1394") Annotation( "NIFSTD:Swanson-rat-1998_abbrevSource") Annotation( ) "PVHpm") AnnotationAssertion( "BAMS:PVHpm") AnnotationAssertion( "BIRNLEX:1394") AnnotationAssertion( "HBA:4583") AnnotationAssertion( "MBA:103") AnnotationAssertion(Annotation( "BIRNLEX:1394") Annotation( ) "paraventricular nucleus of the hypothalamus magnocellular division - posterior magnocellular part") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BAMS:PVHpm") "paraventricular hypothalamic nucleus posterior magnocellular part") AnnotationAssertion(Annotation( "BAMS:PVHpm") "paraventricular hypothalamic nucleus, magnocellular division, posterior magnocellular part") AnnotationAssertion(Annotation( "BAMS:PVHpm") "paraventricular nucleus of the hypothalamus, magnocellular division, posterior magnocellular part") AnnotationAssertion( "UBERON:0014601") AnnotationAssertion(rdfs:label "paraventricular nucleus of the hypothalamus magnocellular division - posterior magnocellular part") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (paraventricular nucleus of the hypothalamus descending division) AnnotationAssertion(Annotation( "BIRNLEX:1413") Annotation( "NIFSTD:Swanson-rat-1992_abbrevSource") Annotation( ) "PVHd") AnnotationAssertion( ) AnnotationAssertion( "BAMS:PVHd") AnnotationAssertion( "BIRNLEX:1413") AnnotationAssertion( "DHBA:10477") AnnotationAssertion( "HBA:4575") AnnotationAssertion( "MBA:63") AnnotationAssertion(Annotation( "BIRNLEX:1413") Annotation( ) "paraventricular nucleus of the hypothalamus descending division") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BAMS:PVHd") "paraventricular hypothalamic nucleus, descending division") AnnotationAssertion(Annotation( "BAMS:PVHd") "paraventricular nucleus of the hypothalamus, descending division") AnnotationAssertion( "UBERON:0014602") AnnotationAssertion(rdfs:label "paraventricular nucleus of the hypothalamus descending division") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (paraventricular nucleus of the hypothalamus magnocellular division) AnnotationAssertion(Annotation( "BIRNLEX:1419") Annotation( "NIFSTD:Swanson-rat-1992_abbrevSource") Annotation( ) "PVHm") AnnotationAssertion( ) AnnotationAssertion( "BAMS:PVHm") AnnotationAssertion( "BIRNLEX:1419") AnnotationAssertion( "DHBA:10478") AnnotationAssertion( "HBA:4580") AnnotationAssertion( "MBA:71") AnnotationAssertion(Annotation( "BIRNLEX:1419") Annotation( ) "paraventricular nucleus of the hypothalamus magnocellular division") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BAMS:PVHm") "paraventricular hypothalamic nucleus magnocellular division") AnnotationAssertion(Annotation( "BAMS:PVHm") "paraventricular hypothalamic nucleus, magnocellular division") AnnotationAssertion(Annotation( "BAMS:PVHm") "paraventricular nucleus of the hypothalamus, magnocellular division") AnnotationAssertion( "UBERON:0014603") AnnotationAssertion(rdfs:label "paraventricular nucleus of the hypothalamus magnocellular division") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (paraventricular nucleus of the hypothalamus parvicellular division) AnnotationAssertion(Annotation( "BIRNLEX:1426") Annotation( "NIFSTD:Swanson-rat-1992_abbrevSource") Annotation( ) "PVHp") AnnotationAssertion( ) AnnotationAssertion( "BAMS:PVHp") AnnotationAssertion( "BIRNLEX:1426") AnnotationAssertion( "DHBA:10479") AnnotationAssertion( "HBA:4586") AnnotationAssertion( "MBA:94") AnnotationAssertion(Annotation( "BIRNLEX:1426") Annotation( ) "paraventricular nucleus of the hypothalamus parvicellular division") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BAMS:PVHp") "paraventricular hypothalamic nucleus parvicellular division") AnnotationAssertion(Annotation( "BAMS:PVHp") "paraventricular hypothalamic nucleus, parvicellular division") AnnotationAssertion(Annotation( "BAMS:PVHp") "paraventricular nucleus of the hypothalamus, parvicellular division") AnnotationAssertion( "UBERON:0014604") AnnotationAssertion(rdfs:label "paraventricular nucleus of the hypothalamus parvicellular division") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (fundus striati) AnnotationAssertion(Annotation( "NLX:144261") "The ventral portion of the dorsal striatum, linking the caudate nucleus and the putamen anteriorly (adapted from Wikipedia).") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:FS") AnnotationAssertion( "BAMS:FStr") AnnotationAssertion( "MBA:998") AnnotationAssertion( "NLX:144261") AnnotationAssertion(Annotation( "NLX:144261") "fundus striati") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BAMS:FS") "fundus of striatum") AnnotationAssertion(Annotation( "NLX:144261") "fundus of the striatum") AnnotationAssertion(Annotation( "NLX:144261") "striatal fundus") AnnotationAssertion( "UBERON:0014605") AnnotationAssertion(rdfs:label "fundus striati") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "ABA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (thoracic spinal cord lateral horn) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A spinal cord lateral horn that is part of a thoracic spinal cord.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:1397") AnnotationAssertion(Annotation( "BIRNLEX:1397") "UMLS:C0228631") AnnotationAssertion(Annotation( "BIRNLEX:1397") "UMLS:C1288551") AnnotationAssertion(Annotation( "BIRNLEX:1397") Annotation( ) "thoracic spinal cord lateral horn") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BIRNLEX:1397") "thoracic spinal cord intermediate horn") AnnotationAssertion( "UBERON:0014607") AnnotationAssertion(rdfs:label "thoracic spinal cord lateral horn") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (inferior occipital gyrus) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:IOG") AnnotationAssertion( "BAMS:O3") AnnotationAssertion( "BIRNLEX:1399") AnnotationAssertion( "DHBA:12153") AnnotationAssertion( "FMA:273129") AnnotationAssertion( "HBA:4205") AnnotationAssertion(Annotation( "BIRNLEX:1399") "UMLS:C1110643") AnnotationAssertion(Annotation( "BIRNLEX:1399") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=156") AnnotationAssertion(Annotation( "BIRNLEX:1399") Annotation( ) "inferior occipital gyrus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:156") Annotation( ) "gyrus occipitalis inferior") AnnotationAssertion(Annotation( "NeuroNames:156") Annotation( ) "gyrus occipitalis tertius") AnnotationAssertion( "UBERON:0014608") AnnotationAssertion(rdfs:label "inferior occipital gyrus") SubClassOf( ) # Class: (thoracic spinal cord dorsal horn) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A dorsal horn of spinal cord that is part of a thoracic spinal cord.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:1404") AnnotationAssertion(Annotation( "BIRNLEX:1404") "UMLS:C0228628") AnnotationAssertion(Annotation( "BIRNLEX:1404") Annotation( ) "thoracic spinal cord dorsal horn") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BIRNLEX:1404") "thoracic spinal cord posterior horn") AnnotationAssertion( "UBERON:0014609") AnnotationAssertion(rdfs:label "thoracic spinal cord dorsal horn") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (thoracic spinal cord ventral horn) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A ventral horn of spinal cord that is part of a thoracic spinal cord.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:1410") AnnotationAssertion(Annotation( "BIRNLEX:1410") "UMLS:C0228632") AnnotationAssertion(Annotation( "BIRNLEX:1410") "UMLS:C1288552") AnnotationAssertion(Annotation( "BIRNLEX:1410") Annotation( ) "thoracic spinal cord ventral horn") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BIRNLEX:1410") "thoracic spinal cord anterior horn") AnnotationAssertion( "UBERON:0014610") AnnotationAssertion(rdfs:label "thoracic spinal cord ventral horn") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (apex of thoracic spinal cord dorsal horn) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:1427") AnnotationAssertion(Annotation( "BIRNLEX:1427") "UMLS:C0228629") AnnotationAssertion(Annotation( "BIRNLEX:1427") Annotation( ) "apex of thoracic spinal cord dorsal horn") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BIRNLEX:1427") "apex of thoracic spinal cord posterior horn") AnnotationAssertion( "UBERON:0014611") AnnotationAssertion(rdfs:label "apex of thoracic spinal cord dorsal horn") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (substantia gelatinosa of thoracic spinal cord dorsal horn) AnnotationAssertion(Annotation( "BIRNLEX:1432") "Substantia gelatinosa of thoracic spinal cord posterior horn.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:1432") AnnotationAssertion(Annotation( "BIRNLEX:1432") "UMLS:C0228630") AnnotationAssertion(Annotation( "BIRNLEX:1432") "UMLS:C1288554") AnnotationAssertion(Annotation( "BIRNLEX:1432") Annotation( ) "substantia gelatinosa of thoracic spinal cord dorsal horn") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BIRNLEX:1432") "substantia gelatinosa of thoracic spinal cord posterior horn") AnnotationAssertion( "UBERON:0014612") AnnotationAssertion(rdfs:label "substantia gelatinosa of thoracic spinal cord dorsal horn") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (cervical spinal cord gray matter) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A gray matter of spinal cord that is part of a cervical spinal cord.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:1521") AnnotationAssertion(Annotation( "BIRNLEX:1521") "UMLS:C0228610") AnnotationAssertion(Annotation( "BIRNLEX:1521") Annotation( ) "cervical spinal cord gray matter") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0014613") AnnotationAssertion(rdfs:label "cervical spinal cord gray matter") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (cervical spinal cord white matter) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A white matter of spinal cord that is part of a cervical spinal cord.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:1531") AnnotationAssertion(Annotation( "BIRNLEX:1531") "UMLS:C0228616") AnnotationAssertion(Annotation( "BIRNLEX:1531") Annotation( ) "cervical spinal cord white matter") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0014614") AnnotationAssertion(rdfs:label "cervical spinal cord white matter") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (accessory nerve root) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A nerve root that is part of a accessory XI nerve.") AnnotationAssertion(Annotation( "BIRNLEX:1580") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "c11n") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:c11n") AnnotationAssertion( "BIRNLEX:1580") AnnotationAssertion( "DHBA:12883") AnnotationAssertion( "DMBA:17749") AnnotationAssertion(Annotation( "BIRNLEX:1580") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=703") AnnotationAssertion(Annotation( "BIRNLEX:1580") Annotation( ) "accessory nerve root") AnnotationAssertion( "root of accessory nerve") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:703") "accessory portion of spinal accessory nerve") AnnotationAssertion(Annotation( "NeuroNames:703") "bulbar accessory nerve") AnnotationAssertion(Annotation( "NeuroNames:703") "bulbar part of accessory nerve") AnnotationAssertion(Annotation( "NeuroNames:703") "cranial accessory nerve") AnnotationAssertion(Annotation( "BAMS:c11n") "cranial part of accessory nerve") AnnotationAssertion(Annotation( "NeuroNames:703") "cranial part of the accessory nerve") AnnotationAssertion(Annotation( "NeuroNames:703") "cranial portion of eleventh cranial nerve") AnnotationAssertion(Annotation( "NeuroNames:703") "internal branch of accessory nerve") AnnotationAssertion(Annotation( "NeuroNames:703") "nerve XI (cranialis)") AnnotationAssertion(Annotation( "NeuroNames:703") Annotation( ) "pars vagalis of nervus accessorius") AnnotationAssertion(Annotation( "NeuroNames:703") Annotation( ) "radices craniales nervi accessorii") AnnotationAssertion( "UBERON:0014615") AnnotationAssertion(rdfs:label "accessory nerve root") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (dorsal nerve root of thoracic spinal cord) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:1601") AnnotationAssertion(Annotation( "BIRNLEX:1601") "UMLS:C1288559") AnnotationAssertion(Annotation( "BIRNLEX:1601") Annotation( ) "dorsal nerve root of thoracic spinal cord") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BIRNLEX:1601") "posterior nerve root of thoracic spinal cord") AnnotationAssertion( "UBERON:0014616") AnnotationAssertion(rdfs:label "dorsal nerve root of thoracic spinal cord") SubClassOf(Annotation( "NIFSTD"^^xsd:string) ) # Class: (ventral nerve root of thoracic spinal cord) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:1606") AnnotationAssertion(Annotation( "BIRNLEX:1606") "UMLS:C0228639") AnnotationAssertion(Annotation( "BIRNLEX:1606") Annotation( ) "ventral nerve root of thoracic spinal cord") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BIRNLEX:1606") "anterior nerve root of thoracic spinal cord") AnnotationAssertion( "UBERON:0014617") AnnotationAssertion(rdfs:label "ventral nerve root of thoracic spinal cord") SubClassOf(Annotation( "NIFSTD"^^xsd:string) ) # Class: (middle frontal sulcus) AnnotationAssertion(Annotation( "BIRNLEX:1650") Annotation( "NIFSTD:NeuroNames_abbrevSource"^^xsd:string) Annotation( ) "MFS") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:mfs") AnnotationAssertion( "BIRNLEX:1650") AnnotationAssertion( "DHBA:146034816") AnnotationAssertion( "HBA:9359") AnnotationAssertion(Annotation( "BIRNLEX:1650") "UMLS:C0228199") AnnotationAssertion(Annotation( "BIRNLEX:1650") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=62") AnnotationAssertion(Annotation( "BIRNLEX:1650") Annotation( ) "middle frontal sulcus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:62") "intermediate frontal sulcus") AnnotationAssertion(Annotation( "BIRNLEX:1650") "middle frontal fissure") AnnotationAssertion(Annotation( "BIRNLEX:1650") "sulcus F3") AnnotationAssertion(Annotation( "NeuroNames:62") Annotation( ) "sulcus frontalis intermedius") AnnotationAssertion(Annotation( "BIRNLEX:1650") "sulcus frontalis medius") AnnotationAssertion(Annotation( "NeuroNames:62") Annotation( ) "sulcus frontalis medius (Eberstaller)") AnnotationAssertion( "UBERON:0014618") AnnotationAssertion(rdfs:label "middle frontal sulcus") SubClassOf( ) # Class: (cervical spinal cord lateral horn) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A spinal cord lateral horn that is part of a cervical spinal cord.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:1665") AnnotationAssertion(Annotation( "BIRNLEX:1665") "UMLS:C0228614") AnnotationAssertion(Annotation( "BIRNLEX:1665") "UMLS:C1278739") AnnotationAssertion(Annotation( "BIRNLEX:1665") Annotation( ) "cervical spinal cord lateral horn") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BIRNLEX:1665") "cervical spinal cord intermediate horn") AnnotationAssertion( "UBERON:0014619") AnnotationAssertion(rdfs:label "cervical spinal cord lateral horn") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses(Annotation( "NIFSTD"^^xsd:string) ) # Class: (cervical spinal cord dorsal horn) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A dorsal horn of spinal cord that is part of a cervical spinal cord.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:1673") AnnotationAssertion(Annotation( "BIRNLEX:1673") "UMLS:C0228611") AnnotationAssertion(Annotation( "BIRNLEX:1673") Annotation( ) "cervical spinal cord dorsal horn") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BIRNLEX:1673") "cervical spinal cord posterior horn") AnnotationAssertion( "UBERON:0014620") AnnotationAssertion(rdfs:label "cervical spinal cord dorsal horn") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses(Annotation( "NIFSTD"^^xsd:string) ) # Class: (cervical spinal cord ventral horn) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A ventral horn of spinal cord that is part of a cervical spinal cord.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:1680") AnnotationAssertion(Annotation( "BIRNLEX:1680") "UMLS:C0228615") AnnotationAssertion(Annotation( "BIRNLEX:1680") "UMLS:C1278740") AnnotationAssertion(Annotation( "BIRNLEX:1680") Annotation( ) "cervical spinal cord ventral horn") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BIRNLEX:1680") "cervical spinal cord anterior horn") AnnotationAssertion( "UBERON:0014621") AnnotationAssertion(rdfs:label "cervical spinal cord ventral horn") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses(Annotation( "NIFSTD"^^xsd:string) ) # Class: (apex of cervical spinal cord dorsal horn) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:1714") AnnotationAssertion(Annotation( "BIRNLEX:1714") "UMLS:C0228612") AnnotationAssertion(Annotation( "BIRNLEX:1714") Annotation( ) "apex of cervical spinal cord dorsal horn") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BIRNLEX:1714") "apex of cervical spinal cord posterior horn") AnnotationAssertion( "UBERON:0014622") AnnotationAssertion(rdfs:label "apex of cervical spinal cord dorsal horn") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (substantia gelatinosa of cervical spinal cord dorsal horn) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A substantia gelatinosa that is part of a cervical spinal cord dorsal horn.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:1723") AnnotationAssertion(Annotation( "BIRNLEX:1723") "UMLS:C0228613") AnnotationAssertion(Annotation( "BIRNLEX:1723") Annotation( ) "substantia gelatinosa of cervical spinal cord dorsal horn") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BIRNLEX:1723") "substantia gelatinosa of cervical spinal cord posterior horn") AnnotationAssertion( "UBERON:0014623") AnnotationAssertion(rdfs:label "substantia gelatinosa of cervical spinal cord dorsal horn") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (basis modioli) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:2522") AnnotationAssertion( "FMA:75640") AnnotationAssertion(Annotation( "BIRNLEX:2522") "UMLS:C0458781") AnnotationAssertion(Annotation( "FMA:75640") "base of modiolus cochleae") AnnotationAssertion(Annotation( "FMA:75640") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "basis cochleae") AnnotationAssertion(Annotation( "BIRNLEX:2522") Annotation( ) "basis modioli") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BIRNLEX:2522") "base of modiolus of cochlea") AnnotationAssertion( "UBERON:0014624") AnnotationAssertion(rdfs:label "basis modioli") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (base of cochlear canal) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:2556") AnnotationAssertion(Annotation( "BIRNLEX:2556") "UMLS:C0458766") AnnotationAssertion(Annotation( "BIRNLEX:2556") Annotation( ) "base of the cochlear canal") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0014626") AnnotationAssertion(rdfs:label "base of cochlear canal") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (vestibular fissure of the cochlear canal) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:2558") AnnotationAssertion(Annotation( "BIRNLEX:2558") "UMLS:C0458761") AnnotationAssertion(Annotation( "BIRNLEX:2558") Annotation( ) "vestibular fissure of the cochlear canal") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0014628") AnnotationAssertion(rdfs:label "vestibular fissure of the cochlear canal") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (terminal part of the cochlear canal) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:2559") AnnotationAssertion(Annotation( "BIRNLEX:2559") "UMLS:C0458768") AnnotationAssertion(Annotation( "BIRNLEX:2559") Annotation( ) "terminal part of the cochlear canal") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0014629") AnnotationAssertion(rdfs:label "terminal part of the cochlear canal") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (ventral gray commissure of spinal cord) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:2676") AnnotationAssertion( "FMA:77038") AnnotationAssertion(Annotation( "BIRNLEX:2676") "UMLS:C0228572") AnnotationAssertion(Annotation( "FMA:77038") "anterior grey commissure of spinal cord") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) "commissura grisea anterior medullae spinalis") AnnotationAssertion(Annotation( "BIRNLEX:2676") Annotation( ) "spinal cord anterior gray commissure") AnnotationAssertion(Annotation( "FMA:77038") "ventral grey commissure of spinal cord") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0014630") AnnotationAssertion(rdfs:label "ventral gray commissure of spinal cord") SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) DisjointClasses(Annotation( "lexical"^^xsd:string) ) # Class: (dorsal gray commissure of spinal cord) AnnotationAssertion(Annotation( "NeuroNames:2017") "The part of the gray commissure in the spinal central gray posterior to the central canal of the spinal cord.") AnnotationAssertion( "It is identified by Nissl stain and found in the human ( Crosby-1962 ) and the rat ( Swanson-2004 ).") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:2677") AnnotationAssertion( "FMA:77037") AnnotationAssertion(Annotation( "BIRNLEX:2677") "UMLS:C0228573") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) "commissura grisea posterior medullae spinalis") AnnotationAssertion(Annotation( "NeuroNames:2017") "dorsal gray commissure") AnnotationAssertion(Annotation( "FMA:77037") "dorsal grey commissure of spinal cord") AnnotationAssertion(Annotation( "FMA:77037") "posterior grey commissure of spinal cord") AnnotationAssertion(Annotation( "BIRNLEX:2677") Annotation( ) "spinal cord posterior gray commissure") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0014631") AnnotationAssertion(rdfs:label "dorsal gray commissure of spinal cord") SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (apex of lumbar spinal cord dorsal horn) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:811") AnnotationAssertion(Annotation( "BIRNLEX:811") "UMLS:C0228647") AnnotationAssertion(Annotation( "BIRNLEX:811") Annotation( ) "apex of lumbar spinal cord dorsal horn") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BIRNLEX:811") "apex of lumbar spinal cord posterior horn") AnnotationAssertion( "UBERON:0014632") AnnotationAssertion(rdfs:label "apex of lumbar spinal cord dorsal horn") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (substantia gelatinosa of lumbar spinal cord dorsal horn) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A substantia gelatinosa that is part of a lumbar spinal cord dorsal horn.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:819") AnnotationAssertion(Annotation( "BIRNLEX:819") "UMLS:C0228648") AnnotationAssertion(Annotation( "BIRNLEX:819") "UMLS:C1282211") AnnotationAssertion(Annotation( "BIRNLEX:819") Annotation( ) "substantia gelatinosa of lumbar spinal cord dorsal horn") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BIRNLEX:819") "substantia gelatinosa of lumbar spinal cord posterior horn") AnnotationAssertion( "UBERON:0014633") AnnotationAssertion(rdfs:label "substantia gelatinosa of lumbar spinal cord dorsal horn") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (ventral nerve root of cervical spinal cord) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A ventral root of spinal cord that overlaps a cervical spinal cord.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:958") AnnotationAssertion(Annotation( "BIRNLEX:958") "UMLS:C1278750") AnnotationAssertion(Annotation( "BIRNLEX:958") Annotation( ) "ventral nerve root of cervical spinal cord") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BIRNLEX:958") "anterior nerve root of cervical spinal cord") AnnotationAssertion( "UBERON:0014634") AnnotationAssertion(rdfs:label "ventral nerve root of cervical spinal cord") SubClassOf( ) SubClassOf(Annotation( "NIFSTD"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) # Class: (dorsal nerve root of cervical spinal cord) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A dorsal root of spinal cord that overlaps a cervical spinal cord.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:964") AnnotationAssertion(Annotation( "BIRNLEX:964") "UMLS:C1278751") AnnotationAssertion(Annotation( "BIRNLEX:964") Annotation( ) "dorsal nerve root of cervical spinal cord") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BIRNLEX:964") "posterior nerve root of cervical spinal cord") AnnotationAssertion( "UBERON:0014635") AnnotationAssertion(rdfs:label "dorsal nerve root of cervical spinal cord") SubClassOf( ) SubClassOf(Annotation( "NIFSTD"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) # Class: (thoracic spinal cord gray matter) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A gray matter of spinal cord that is part of a thoracic spinal cord.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:980") AnnotationAssertion(Annotation( "BIRNLEX:980") "UMLS:C0228627") AnnotationAssertion(Annotation( "BIRNLEX:980") Annotation( ) "thoracic spinal cord gray matter") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0014636") AnnotationAssertion(rdfs:label "thoracic spinal cord gray matter") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (thoracic spinal cord white matter) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A white matter of spinal cord that is part of a thoracic spinal cord.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:999") AnnotationAssertion(Annotation( "BIRNLEX:999") "UMLS:C0228633") AnnotationAssertion(Annotation( "BIRNLEX:999") "UMLS:C1288557") AnnotationAssertion(Annotation( "BIRNLEX:999") Annotation( ) "thoracic spinal cord white matter") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0014637") AnnotationAssertion(rdfs:label "thoracic spinal cord white matter") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lumbar spinal cord dorsal horn) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A dorsal horn of spinal cord that is part of a lumbar spinal cord.") AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:884") AnnotationAssertion(Annotation( "BIRNLEX:884") "UMLS:C1282146") AnnotationAssertion(Annotation( "BIRNLEX:884") Annotation( ) "lumbar spinal cord dorsal horn") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BIRNLEX:884") "lumbar spinal cord posterior horn") AnnotationAssertion( "UBERON:0014638") AnnotationAssertion(rdfs:label "lumbar spinal cord dorsal horn") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses(Annotation( "NIFSTD"^^xsd:string) ) DisjointClasses(Annotation( "NIFSTD"^^xsd:string) ) # Class: (frontal sulcus) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A sulcus of brain that is part of a frontal cortex.") AnnotationAssertion( ) AnnotationAssertion( "HBA:9354") AnnotationAssertion( "NCIT:C32639") AnnotationAssertion(Annotation( "ncithesaurus:Frontal_Sulcus") "UMLS:C0459388") AnnotationAssertion(Annotation( "HBA:FLs") Annotation( ) "frontal lobe sulci") AnnotationAssertion( "frontal lobe sulcus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0014639") AnnotationAssertion(rdfs:label "frontal sulcus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (occipital gyrus) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A gyrus that is part of a occipital lobe.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:OG") AnnotationAssertion( "BIRNLEX:747") AnnotationAssertion(Annotation( "BIRNLEX:747") "UMLS:C1110642") AnnotationAssertion(Annotation( "BIRNLEX:747") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=152") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:152") Annotation( ) "gyrus occipitalis") AnnotationAssertion( "UBERON:0014640") AnnotationAssertion(rdfs:label "occipital gyrus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (terminal nerve root) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A nerve root that extends_fibers_into a terminal nerve.") AnnotationAssertion( "BIRNLEX:4045") AnnotationAssertion(Annotation( ) "cranial nerve 0 root") AnnotationAssertion( "root of terminal nerve") AnnotationAssertion(Annotation( "BIRNLEX:4045") Annotation( ) "terminal nerve root") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0014641") AnnotationAssertion(rdfs:label "terminal nerve root") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (vestibulocerebellum) AnnotationAssertion(Annotation( ) "A phylogenetic subdivision of the cerebellum, the oldest part, which regulates balance and eye movements. It receives vestibular input from both the semicircular canals and from the vestibular nuclei, and sends fibres back to the medial and lateral vestibular nuclei. It also receives visual input from the superior colliculi and from the visual cortex (the latter via the pontine nuclei, forming a cortico-ponto-cerebellar pathway). Lesions of the vestibulocerebellum cause disturbances of balance and gait.") AnnotationAssertion( "archicerebellum") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BIRNLEX:904") "archaeocerebellum") AnnotationAssertion(Annotation( "BIRNLEX:904") "archeocerebellum") AnnotationAssertion(Annotation( "BIRNLEX:904") "archicerebellum") AnnotationAssertion( "UBERON:0014642") AnnotationAssertion(rdfs:label "vestibulocerebellum") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (spinocerebellum) AnnotationAssertion(Annotation( ) "A phylogenetic subdivision of the cerebellum, the intermediate part, which regulates body and limb movements. It receives proprioception input from the dorsal columns of the spinal cord (including the spinocerebellar tract) and the trigeminal nerve, as well as from visual and auditory systems. It sends fibres to deep cerebellar nuclei which in turn project to both the cerebral cortex and the brain stem, thus providing modulation of descending motor systems.") AnnotationAssertion( "consider merging into UBERON:0004006 ! cerebellum intermediate zone") AnnotationAssertion( ) AnnotationAssertion( "paleocerebellum") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0014643") AnnotationAssertion(rdfs:label "spinocerebellum") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) # Class: (cerebrocerebellum) AnnotationAssertion(Annotation( ) "The part of the cerebellar cortex that receives input from the cerebral cortex via axons from the pontine relay nuclei.") AnnotationAssertion(Annotation( "MP:0009965") "the most lateral paired regions of the cerebellum; the lateral zone receives input from the parietal cortex via pontocerebellar mossy fibers regarding the location and position of the body and integrates input signals with indications of muscle activit[MP:0009965]y") AnnotationAssertion( "UBERON:0004005") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "DHBA:12390") AnnotationAssertion(Annotation( "MP:0009965") "cerebellum lateral hemisphere") AnnotationAssertion(Annotation( "MP:0009965") "cerebellum lateral zone") AnnotationAssertion( "neocerebellum") AnnotationAssertion( "pontocerebellum") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "MP:0009965") Annotation( ) "cerebrocerebellum") AnnotationAssertion( "UBERON:0014644") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "cerebrocerebellum") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (hemisphere part of cerebellar anterior lobe) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A multi-tissue structure that is part of a anterior lobe of cerebellum and is part of a cerebellar hemisphere.") AnnotationAssertion( ) AnnotationAssertion( "BAMS:HAL") AnnotationAssertion( "BIRNLEX:1339") AnnotationAssertion( "FMA:72254") AnnotationAssertion( "HBA:12931") AnnotationAssertion(Annotation( "FMA:72254") "hemisphere of anterior lobe") AnnotationAssertion(Annotation( "FMA:72254") "hemisphere of anterior lobe of cerebellum") AnnotationAssertion(Annotation( "FMA:72254") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "hemispherium lobus anterior") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0014647") AnnotationAssertion(rdfs:label "hemisphere part of cerebellar anterior lobe") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (hemisphere part of cerebellar posterior lobe) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A multi-tissue structure that is part of a cerebellar hemisphere and is part of a posterior lobe of cerebellum.") AnnotationAssertion( ) AnnotationAssertion( "BAMS:HPL") AnnotationAssertion( "FMA:72256") AnnotationAssertion( "HBA:12936") AnnotationAssertion( "NLXANAT:20081261") AnnotationAssertion(Annotation( "FMA:72256") "hemisphere of posterior lobe") AnnotationAssertion(Annotation( "FMA:72256") "hemisphere of posterior lobe of cerebellum") AnnotationAssertion(Annotation( "FMA:72256") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "hemispherium lobus posterior") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0014648") AnnotationAssertion(rdfs:label "hemisphere part of cerebellar posterior lobe") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (white matter of medulla oblongata) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A white matter that is part of a medulla oblongata.") AnnotationAssertion( ) AnnotationAssertion( "BAMS:mw") AnnotationAssertion( "BIRNLEX:1024") AnnotationAssertion( "BIRNLEX:1414") AnnotationAssertion( "FMA:83944") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) "substantia alba medullae oblongatae") AnnotationAssertion(Annotation( "FMA:83944") "white matter of medulla") AnnotationAssertion(Annotation( "FMA:83944") "white substance of medulla") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BAMS:mw") "medullary white matter") AnnotationAssertion( "UBERON:0014649") AnnotationAssertion(rdfs:label "white matter of medulla oblongata") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (dorsal hypothalamic nucleus) AnnotationAssertion(Annotation( "BTO:0002451") Annotation( "Dorlands_Medical_Dictionary:MerckSource") "A nerve cell nucleus situated in the dorsal portion of the intermediate hypothalamic region.") AnnotationAssertion( "BAMS:DHy") AnnotationAssertion( "BAMS:Do") AnnotationAssertion( "BAMS:OH") AnnotationAssertion( "BTO:0002451") AnnotationAssertion( "FMA:77685") AnnotationAssertion(Annotation( "FMA:77685") "dorsal nucleus of hypothalamus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0002451") "nucleus dorsalis hypothalami") AnnotationAssertion( "UBERON:0014650") AnnotationAssertion(rdfs:label "dorsal hypothalamic nucleus") SubClassOf(Annotation( "BTO"^^xsd:string) ) # Class: (nucleus recessus lateralis) AnnotationAssertion( "BTO:0003662") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0014663") AnnotationAssertion(rdfs:label "nucleus recessus lateralis") SubClassOf( ) # Class: (nucleus recessus posterioris) AnnotationAssertion( "BTO:0003663") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0014664") AnnotationAssertion(rdfs:label "nucleus recessus posterioris") SubClassOf( ) # Class: (nucleus preopticus) AnnotationAssertion(Annotation( "BTO:0003664") "The nucleus preopticus (NPO) of the hypothalamus of common carp, is a homolog of the paraventricular nucleus of mammals.") AnnotationAssertion( "BTO:0003664") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0003664") "nucleus praeopticus") AnnotationAssertion( "UBERON:0014665") AnnotationAssertion(rdfs:label "nucleus preopticus") SubClassOf(Annotation( "BTO"^^xsd:string) ) # Class: (nucleus recessus preopticus) AnnotationAssertion( "BTO:0003665") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0014666") AnnotationAssertion(rdfs:label "nucleus recessus preopticus") SubClassOf(Annotation( "BTO"^^xsd:string) ) # Class: (periventricular nucleus of hypothalamus) AnnotationAssertion(Annotation( "BTO:0003795") "A small nucleus at the base of the hypothalamus, adjacent to the arcuate nucleus.") AnnotationAssertion( ) AnnotationAssertion( "BAMS:PE") AnnotationAssertion( "BAMS:Pe") AnnotationAssertion( "BTO:0003795") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0003795") "periventricular hypothalamic nucleus") AnnotationAssertion(Annotation( "BAMS:PE") "periventricular nucleus of the hypothalamus") AnnotationAssertion( "UBERON:0014667") AnnotationAssertion(rdfs:label "periventricular nucleus of hypothalamus") SubClassOf(Annotation( "BTO"^^xsd:string) ) # Class: (distal interphalangeal joint of manual digit 2) AnnotationAssertion( ) AnnotationAssertion( "FMA:35334") AnnotationAssertion(Annotation( "FMA:35334") "distal interphalangeal joint of index finger") AnnotationAssertion(Annotation( ) Annotation( ) "distal interphalangeal joint of manual digit II") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0014668") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "distal interphalangeal joint of manual digit 2") SubClassOf( ) SubClassOf( ) # Class: (distal interphalangeal joint of manual digit 4) AnnotationAssertion( ) AnnotationAssertion( "FMA:35340") AnnotationAssertion(Annotation( ) Annotation( ) "distal interphalangeal joint of manual digit IV") AnnotationAssertion(Annotation( "FMA:35340") "distal interphalangeal joint of ring finger") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0014670") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "distal interphalangeal joint of manual digit 4") SubClassOf( ) SubClassOf( ) # Class: (distal interphalangeal joint of manural digit 5) AnnotationAssertion( ) AnnotationAssertion( "FMA:35343") AnnotationAssertion(Annotation( "FMA:35343") "distal interphalangeal joint of little finger") AnnotationAssertion(Annotation( ) Annotation( ) "distal interphalangeal joint of manural digit V") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0014671") AnnotationAssertion(rdfs:label "distal interphalangeal joint of manural digit 5") SubClassOf( ) SubClassOf( ) # Class: (distal interphalangeal joint of pedal digit 2) AnnotationAssertion( ) AnnotationAssertion( "FMA:35369") AnnotationAssertion(Annotation( ) Annotation( ) "distal interphalangeal joint of pedal digit II") AnnotationAssertion(Annotation( "FMA:35369") "distal interphalangeal joint of second digit of foot") AnnotationAssertion(Annotation( "FMA:35369") "distal interphalangeal joint of second toe") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0014672") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "distal interphalangeal joint of pedal digit 2") SubClassOf( ) SubClassOf( ) # Class: (distal interphalangeal joint of pedal digit 4) AnnotationAssertion( ) AnnotationAssertion( "FMA:35387") AnnotationAssertion(Annotation( "FMA:35387") "distal interphalangeal joint of fourth digit of foot") AnnotationAssertion(Annotation( "FMA:35387") "distal interphalangeal joint of fourth toe") AnnotationAssertion(Annotation( ) Annotation( ) "distal interphalangeal joint of pedal digit IV") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0014674") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "distal interphalangeal joint of pedal digit 4") SubClassOf( ) SubClassOf( ) # Class: (distal interphalangeal joint of pedal digit 5) AnnotationAssertion( ) AnnotationAssertion( "FMA:35393") AnnotationAssertion(Annotation( "FMA:35393") "distal interphalangeal joint of fifth digit of foot") AnnotationAssertion(Annotation( "FMA:35393") "distal interphalangeal joint of fifth toe") AnnotationAssertion(Annotation( "FMA:35393") "distal interphalangeal joint of little toe") AnnotationAssertion(Annotation( ) Annotation( ) "distal interphalangeal joint of pedal digit V") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0014675") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "distal interphalangeal joint of pedal digit 5") SubClassOf( ) SubClassOf( ) # Class: (distal interphalangeal joint of digit 2) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A distal interphalangeal joint that is part of a digit 2.") AnnotationAssertion( "check whether NCITA classes belong with hand or generic autopod") AnnotationAssertion( "NCIT:C102291") AnnotationAssertion(Annotation( ) Annotation( ) "distal interphalangeal joint of digit II") AnnotationAssertion( "uberon") AnnotationAssertion( "distal interphalangeal joint 2") AnnotationAssertion( "UBERON:0014677") AnnotationAssertion(rdfs:label "distal interphalangeal joint of digit 2") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (distal interphalangeal joint of digit 4) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A distal interphalangeal joint that is part of a digit 4.") AnnotationAssertion( "NCIT:C102293") AnnotationAssertion(Annotation( ) Annotation( ) "distal interphalangeal joint of digit IV") AnnotationAssertion( "uberon") AnnotationAssertion( "distal interphalangeal joint 4") AnnotationAssertion( "UBERON:0014679") AnnotationAssertion(rdfs:label "distal interphalangeal joint of digit 4") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (distal interphalangeal joint of digit 5) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A distal interphalangeal joint that is part of a digit 5.") AnnotationAssertion( "NCIT:C102294") AnnotationAssertion(Annotation( ) Annotation( ) "distal interphalangeal joint of digit V") AnnotationAssertion( "uberon") AnnotationAssertion( "distal interphalangeal joint 5") AnnotationAssertion( "UBERON:0014680") AnnotationAssertion(rdfs:label "distal interphalangeal joint of digit 5") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (tooth whorl) AnnotationAssertion(Annotation( ) "A spirally arranged cluster of teeth.") AnnotationAssertion(Annotation( "stem") Annotation( ) Annotation( "helicoprion") ) AnnotationAssertion( ) AnnotationAssertion( "tooth spiral") AnnotationAssertion( "whorl of teeth") AnnotationAssertion( "spiral tooth cluster") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0014682") AnnotationAssertion(rdfs:label "tooth whorl") SubClassOf( ) # Class: (parasymphisial tooth whorl) AnnotationAssertion(Annotation( ) "A tooth whorl located at or near the mandibular symphysis.") AnnotationAssertion( ) AnnotationAssertion( "parasymphisial tooth spiral") AnnotationAssertion( "parasymphysical tooth spiral") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0014683") AnnotationAssertion(rdfs:label "parasymphisial tooth whorl") SubClassOf( ) SubClassOf( ) # Class: (Helicoprion tooth whorl) AnnotationAssertion(Annotation( ) Annotation( ) "A tooth whorl found in extinct holocephalids, in which the teeth in the center of the spiral are smallest and oldest, probably occupying the entire mandibular arch.") AnnotationAssertion(Annotation( "stem") Annotation( ) Annotation( "helicoprion") ) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0014684") AnnotationAssertion(rdfs:label "Helicoprion tooth whorl") SubClassOf( ) SubClassOf( ) # Class: (pterygoid plexus) AnnotationAssertion(Annotation( ) "The pterygoid plexus is a venous plexus of considerable size, and is situated between the temporalis muscle and lateral pterygoid muscle, and partly between the two pterygoid muscles.") AnnotationAssertion( ) AnnotationAssertion( "FMA:50944") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) Annotation( ) "plexus venosus pterygoideus") AnnotationAssertion(Annotation( ) "pterygoid venous plexus") AnnotationAssertion(Annotation( "FMA:50944") "pterygoid venous plexus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "middle meningeal vein") AnnotationAssertion(Annotation( ) Annotation( ) "plexus pterygoideus") AnnotationAssertion(Annotation( ) "pterygoid plexus vein") AnnotationAssertion( "UBERON:0014685") AnnotationAssertion(rdfs:label "pterygoid plexus") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ) # Class: (angular vein) AnnotationAssertion(Annotation( ) "The angular vein formed by the junction of the frontal vein and supraorbital vein, runs obliquely downward, on the side of the root of the nose, to the level of the lower margin of the orbit, where it becomes the anterior facial vein. It receives the external nasal veins of the ala nasi, and communicates with the superior ophthalmic vein through the nasofrontal vein, thus establishing an important anastomosis between the anterior facial vein and the cavernous sinus.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:50893") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0014686") AnnotationAssertion(rdfs:label "angular vein") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (temporal sulcus) AnnotationAssertion(Annotation( "ncithesaurus:Temporal_Sulcus") "Any of three grooves in the temporal lobe including the inferior, middle, and superior temporal sulci.") AnnotationAssertion( ) AnnotationAssertion( "HBA:9377") AnnotationAssertion( "NCIT:C33744") AnnotationAssertion(Annotation( "HBA:TLs") Annotation( ) "temporal lobe sulci") AnnotationAssertion( "temporal lobe sulcus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0014687") AnnotationAssertion(rdfs:label "temporal sulcus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (middle temporal sulcus) AnnotationAssertion(Annotation( "ncithesaurus:Middle_Temporal_Sulcus") "A groove or cleft that divides the outer surface of the temporal lobe running in the same direction but at a lower level to the superior temporal sulcus.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:mts") AnnotationAssertion( "HBA:10150") AnnotationAssertion( "NCIT:C33127") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BAMS:mts") "middle (medial) temporal sulcus") AnnotationAssertion( "UBERON:0014689") AnnotationAssertion(rdfs:label "middle temporal sulcus") SubClassOf( ) # Class: (left gastric vein) AnnotationAssertion(Annotation( ) "The Left gastric vein (or coronary vein) carries blood low in Oxygen, tributaries derived from both surfaces of the stomach; it runs from right to left along the lesser curvature of the stomach, between the two layers of the lesser omentum, to the esophageal opening of the stomach, where it receives some esophageal veins. It then turns backward and passes from left to right behind the omental bursa and drains into the portal vein. Esophageal and paraesophageal varices are primarily supplied by the left gastric vein and typically drain into the azygos/hemiazygos venous system.") AnnotationAssertion( "https://github.com/obophenotype/uberon/wiki/Modeling-paired-structures-Design-Pattern"^^xsd:anyURI) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:15399") AnnotationAssertion(Annotation( ) Annotation( ) "vena gastrica sinistra") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "coronary vein") AnnotationAssertion( "UBERON:0014690") AnnotationAssertion(rdfs:label "left gastric vein") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (right gastric vein) AnnotationAssertion(Annotation( ) "The right gastric vein, also known as the pyloric vein, drains blood from the lesser curvature of the stomach into the hepatic portal vein. It is part of the portal circulation.") AnnotationAssertion( "https://github.com/obophenotype/uberon/wiki/Modeling-paired-structures-Design-Pattern"^^xsd:anyURI) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:15400") AnnotationAssertion(Annotation( ) Annotation( ) "vena gastrica dextra") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "pyloric vein") AnnotationAssertion( "UBERON:0014691") AnnotationAssertion(rdfs:label "right gastric vein") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (superficial epigastric vein) AnnotationAssertion(Annotation( ) "The superficial epigastric vein is a vein which travels with the superficial epigastric artery. It joins the accessory saphenous vein near the fossa ovalis.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:44318") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0014692") AnnotationAssertion(rdfs:label "superficial epigastric vein") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (inferior alveolar artery) AnnotationAssertion( ) AnnotationAssertion( "FMA:49695") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0014693") AnnotationAssertion(rdfs:label "inferior alveolar artery") SubClassOf( ) # Class: (posterior auricular artery) AnnotationAssertion(Annotation( ) "The posterior auricular artery is a small artery and arises from the external carotid artery, above the Digastric muscle and Stylohyoid muscle, opposite the apex of the styloid process. It ascends posteriorly beneath the parotid gland, along the styloid process of the temporal bone, between the cartilage of the ear and the mastoid process of the temporal bone along the lateral side of the head. The posterior auricular artery supplies blood to the scalp posterior to the auricle and to the auricle itself.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:49624") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0014694") AnnotationAssertion(rdfs:label "posterior auricular artery") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (deep auricular artery) AnnotationAssertion(Annotation( ) "The deep auricular artery often arises in common with the anterior tympanic artery. It ascends in the substance of the parotid gland, behind the temporomandibular articulation, pierces the cartilaginous or bony wall of the external acoustic meatus, and supplies its cuticular lining and the outer surface of the tympanic membrane. It gives a branch to the temporomandibular joint.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:49689") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0014695") AnnotationAssertion(rdfs:label "deep auricular artery") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (anterior choroidal artery) AnnotationAssertion(Annotation( ) "The anterior choroidal artery originates from the internal carotid artery, though it also rarely arises from the middle cerebral artery.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:50087") AnnotationAssertion( "NCIT:C32083") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "anterior choroidal") AnnotationAssertion( "UBERON:0014696") AnnotationAssertion(rdfs:label "anterior choroidal artery") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) DisjointClasses(Annotation( "lexical"^^xsd:string) ) # Class: (posterior choroidal artery) AnnotationAssertion( ) AnnotationAssertion( "FMA:50657") AnnotationAssertion( "NCIT:C33352") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0014697") AnnotationAssertion(rdfs:label "posterior choroidal artery") SubClassOf( ) SubClassOf( ) # Class: (lacrimal caruncle) AnnotationAssertion( ) AnnotationAssertion( "FMA:77672") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) Annotation( ) "caruncula lacrimalis") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0014698") AnnotationAssertion(rdfs:label "lacrimal caruncle") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (extraembryonic venous system) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A venous system that overlaps a umbilical cord and is part of a entire extraembryonic component.") AnnotationAssertion( "EHDAA2:0000479") AnnotationAssertion( "EMAPA:16374") AnnotationAssertion( "VHOG:0000282") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0014699") AnnotationAssertion(rdfs:label "extraembryonic venous system") SubClassOf( ) SubClassOf(Annotation( "VHOG"^^xsd:string) ) # Class: (extraembryonic vascular system) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A vascular system that overlaps a umbilical cord and is part of a entire extraembryonic component.") AnnotationAssertion( "EHDAA2:0000478") AnnotationAssertion( "EMAPA:16370") AnnotationAssertion( "VHOG:0001396") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0014701") AnnotationAssertion(rdfs:label "extraembryonic vascular system") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) # Class: (frontonasal process epithelium) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An epithelium that is part of a frontonasal prominence.") AnnotationAssertion( "EHDAA2:0004108") AnnotationAssertion( "EMAPA:32918") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0014702") AnnotationAssertion(rdfs:label "frontonasal process epithelium") SubClassOf(Annotation( "EHDAA2"^^xsd:string) ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (anal membrane ectodermal component) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A unilaminar epithelium that develops_from a ectoderm and is part of a anal region.") AnnotationAssertion( "EHDAA2:0004019") AnnotationAssertion( "EMAPA:25040") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0014703") AnnotationAssertion(rdfs:label "anal membrane ectodermal component") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pleuroperitoneal canal lumen) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An anatomical space that is enclosed by a pleuroperitoneal canal.") AnnotationAssertion( "EHDAA2:0004736") AnnotationAssertion( "EMAPA:25034") AnnotationAssertion(Annotation( "EMAPA:25034") "pleuro-peritoneal canal cavity") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0014704") AnnotationAssertion(rdfs:label "pleuroperitoneal canal lumen") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (median lingual swelling epithelium) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An epithelium that is part of a median lingual swelling.") AnnotationAssertion( "EHDAA2:0001085") AnnotationAssertion( "EMAPA:17188") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "EMAPA:17188") "tuberculum impar epitheilium") AnnotationAssertion( "UBERON:0014705") AnnotationAssertion(rdfs:label "median lingual swelling epithelium") SubClassOf(Annotation( "EHDAA2"^^xsd:string) ) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (primitive renal collecting duct system) AnnotationAssertion( "EHDAA2:0001147") AnnotationAssertion( "EMAPA:17646") AnnotationAssertion(Annotation( "EHDAA2:0001147") "metanephros primitive collecting ducts") AnnotationAssertion(Annotation( "EMAPA:17646") "primitive collecting duct") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0014706") AnnotationAssertion(rdfs:label "primitive renal collecting duct system") SubClassOf(Annotation( "EHDAA2"^^xsd:string) ) SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (interlobular duct) AnnotationAssertion(Annotation( "ncithesaurus:Interlobular_Duct") "A duct that is located between lobules, within the thin connective tissue septa that separate lobules. All interlobular ducts are excretory.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "NCIT:C32828") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0014716") AnnotationAssertion(rdfs:label "interlobular duct") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (mucous acinus) AnnotationAssertion(Annotation( ) Annotation( ) "The secretory unit of a mucous gland. The acinar portion is composed of mucous secreting cells.") AnnotationAssertion( "FMA:86278") AnnotationAssertion( "acinus of mucuous gland") AnnotationAssertion( "mucus acinus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0014717") AnnotationAssertion(rdfs:label "mucous acinus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (intralobular duct) AnnotationAssertion(Annotation( ) "A duct that is located within a lobule, with no more connective tissue intervening between ducts and secretory units (i.e., acini or tubules) than between adjacent secretory units. Intercalated and striated ducts are intralobular.") AnnotationAssertion( ) AnnotationAssertion( "uberon") AnnotationAssertion( "intralobular ductule") AnnotationAssertion( "UBERON:0014719") AnnotationAssertion(rdfs:label "intralobular duct") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (interlobar duct) AnnotationAssertion(Annotation( ) "A duct that is located between lobes, within conspicuous, thick connective tissue septa that separate lobes. All interlobar ducts are excretory.") AnnotationAssertion( "uberon") AnnotationAssertion( "intralobular ductule") AnnotationAssertion( "UBERON:0014720") AnnotationAssertion(rdfs:label "interlobar duct") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (intercalated duct) AnnotationAssertion(Annotation( ) "A small duct which drains individual secretory units. These are usually inconspicuous, lined by a simple epithelium consisting of low cuboidal cells.") AnnotationAssertion( ) AnnotationAssertion( "NCIT:C32820") AnnotationAssertion( "uberon") AnnotationAssertion( "secretory duct") AnnotationAssertion( "UBERON:0014725") AnnotationAssertion(rdfs:label "intercalated duct") SubClassOf( ) # Class: (intercalated duct of pancreas) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An intercalated duct that is part of a pancreas.") AnnotationAssertion( ) AnnotationAssertion( "FMA:16013") AnnotationAssertion( "NCIT:C49267") AnnotationAssertion(Annotation( "FMA:16013") "ductus intercalatus (pancreas)") AnnotationAssertion(Annotation( "FMA:16013") "pancreatic ductule") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0014726") AnnotationAssertion(rdfs:label "intercalated duct of pancreas") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (intercalated duct of salivary gland) AnnotationAssertion(Annotation( "ncithesaurus:Intercalated_Duct_of_the_Salivary_Gland_System") "The tiny tubules with a very thin epithelial layer in the salivary glands running from the salivary acini into the striated duct.") AnnotationAssertion( "secretes bicarbonate, absorbs Cl-") AnnotationAssertion( "FMA:60050") AnnotationAssertion( "NCIT:C49266") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0014727") AnnotationAssertion(rdfs:label "intercalated duct of salivary gland") SubClassOf( ) SubClassOf( ) # Class: (striated duct of salivary gland) AnnotationAssertion(Annotation( ) Annotation( ) "Gland duct which connects an intercalated duct to an interlobular duct in a salivary gland.") AnnotationAssertion( ) AnnotationAssertion( "FMA:60051") AnnotationAssertion( "NCIT:C33635") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0014729") AnnotationAssertion(rdfs:label "striated duct of salivary gland") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (osteon) AnnotationAssertion(Annotation( "MESH:A10.165.265.507") "A circular structural unit of bone tissue. It consists of a central hole, the Haversian canal through which blood vessels run, surrounded by concentric rings, called lamellae.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0004592") AnnotationAssertion( "FMA:32693") AnnotationAssertion( "MESH:D006253") AnnotationAssertion( "NCIT:C32714") AnnotationAssertion(Annotation( "FMA:32693") "haversian system") AnnotationAssertion(Annotation( "FMA:32693") "osteonum") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "bone matrix") AnnotationAssertion(Annotation( "MESH:A10.165.265.507") "haversian canal") AnnotationAssertion(Annotation( ) "haversian system") AnnotationAssertion(Annotation( "MESH:A10.165.265.507") "haversian system") AnnotationAssertion(Annotation( ) "haversian systems") AnnotationAssertion(Annotation( ) "volkmann's vessel") AnnotationAssertion( "UBERON:0014730") AnnotationAssertion(rdfs:label "osteon") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (haversian canal) AnnotationAssertion(Annotation( ) "Haversian canals are a series of tubes around narrow channels formed by lamellae. This is the region of bone called compact bone. Osteons are arranged in parallel to the long axis of the bone. The Haversian canals surround blood vessels and nerve cells throughout the bone and communicate with osteocytes in lacunae (spaces within the dense bone matrix that contain the living bone cells) through canaliculi. This unique arrangement is conducive to mineral salt deposits and storage which gives bone tissue its strength.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:224787") AnnotationAssertion( "NCIT:C32713") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "haversian canals") AnnotationAssertion(Annotation( "MESH:A10.165.265.507") "nutrient canal") AnnotationAssertion( "UBERON:0014731") AnnotationAssertion(rdfs:label "haversian canal") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (compound cell cluster organ) AnnotationAssertion(Annotation( "CARO:0010002") "An anatomical structure consisting of multiple cell cluster organs, that has a largely bona-fide boundary and that does not contain portions of tissue.") AnnotationAssertion( "CARO:0010002") AnnotationAssertion( "FBbt:00007230") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0014732") AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "Examples: compound eye; Johnston's organ.") AnnotationAssertion(rdfs:label "compound cell cluster organ") SubClassOf( ) SubClassOf(Annotation( "2") ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (allocortex) AnnotationAssertion(Annotation( "NeuroNames:759") "One of two types of cerebral cortex defined on the basis of cytoarchitecture and fetal development. The other is neocortex. Allocortex does not pass through a prenatal phase of six-layered structure and has three or four layers in the mature brain ( Schiebler-1999 ). Allocortex has three subtypes: paleocortex, archicortex and periallocortex. This definition differs from that in some older sources, which excluded the olfactory bulb and the accessory olfactory bulb ( Carpenter-1983 ).") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:All") AnnotationAssertion( "DHBA:10292") AnnotationAssertion( "FMA:83687") AnnotationAssertion( "NLX:143557") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:1598") "allocortex (Stephan)") AnnotationAssertion(Annotation( "NeuroNames:1598") "heterogenetic cortex") AnnotationAssertion(Annotation( "NeuroNames:1598") "heterogenetic formations") AnnotationAssertion(Annotation( "NeuroNames:759") "intercalated nucleus of the medulla") AnnotationAssertion(Annotation( "NeuroNames:759") Annotation( ) "nucleus intercalatus (staderini)") AnnotationAssertion(Annotation( "ISBN:0471888893"^^xsd:string) "transitional cortex") AnnotationAssertion( "UBERON:0014734") AnnotationAssertion(rdfs:comment "The allocortex is composed of hippocampal and olfactory structures, which usually display three-layered organization[Brainspan]") AnnotationAssertion(rdfs:label "allocortex") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (paleocortex) AnnotationAssertion(Annotation( "NLX:143559") "Part of the allocortex defined on the basis of cytoarchitecture. The other two are archicortex and periallocortex. It consists of very thin, primitive cortex with few clearly defined layers. It is distinguished ontogenetically by the fact that it does not develop through a cortical plate. It includes the olfactory bulb, accessory olfactory bulb, olfactory tubercle, septum, prepyriform area and periamygdalar area ( Stephan-1975 ). (adapted from Brain Info).") AnnotationAssertion(Annotation( "WP"^^xsd:string) "Paleocortex is present in the parahippocampal gyrus,[1] olfactory bulb, accessory olfactory bulb, olfactory tubercle, piriform cortex, periamygdalar area,[2] anterior olfactory nucleus, anterior perforated substance, and prepyriform area") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:Paleocortex") AnnotationAssertion( "DHBA:10306") AnnotationAssertion( "FMA:62430") AnnotationAssertion( "NLX:143559") AnnotationAssertion(Annotation( "FMA:62430") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "palaeocortex") AnnotationAssertion(Annotation( "DHBA:10306") "paleocortex (semicortex)") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:2336") "paleocortex") AnnotationAssertion(Annotation( "NeuroNames:2336") "paleocortex (Zilles)") AnnotationAssertion( "UBERON:0014735") AnnotationAssertion(rdfs:label "paleocortex") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (periallocortex) AnnotationAssertion(Annotation( "BRAINSPAN:BRAINSPAN") "Agranular cortical structures located next to the allocortex.") AnnotationAssertion( ) AnnotationAssertion( "DHBA:10313") AnnotationAssertion(Annotation( "NeuroNames:2315") "periallocortex") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0014736") AnnotationAssertion(rdfs:label "periallocortex") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (medial pallium) AnnotationAssertion(Annotation( "ISBN:0471888893"^^xsd:string) "Subdivision of pallium that is located is the medial position in vertebrates with an evaginated brain and in the distal position in vertebrates with an everted brain.") AnnotationAssertion(Annotation( "ISBN:0471888893"^^xsd:string) "The pallium of vertebrates have 3 major divisions, medial, dorsal and lateral, but questions of homology are unresolved.") AnnotationAssertion(Annotation( ) Annotation( ) "MP") AnnotationAssertion( "TAO:0000536") AnnotationAssertion( "ZFA:0000536") AnnotationAssertion(Annotation( "ZFA:0000536") "lateral zone of dorsal telencephalon") AnnotationAssertion( "medial zone of dorsal telencephalic area") AnnotationAssertion( "medial zone of dorsal telencephalon") AnnotationAssertion( "uberon") AnnotationAssertion( "area dorsalis telencephali, zona medialis") AnnotationAssertion(Annotation( "ISBN:0471888893"^^xsd:string) "distal pallium (everted brain)") AnnotationAssertion(Annotation( "ISBN:0471888893"^^xsd:string) "hippocampal pallium") AnnotationAssertion(Annotation( "ISBN:0471888893"^^xsd:string) "lateral pallium (everted brain)") AnnotationAssertion( "UBERON:0014738") AnnotationAssertion(rdfs:label "medial pallium") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses(Annotation( "lexical"^^xsd:string) ) # Class: (dorsal pallium) AnnotationAssertion(Annotation( "ISBN:0471888893"^^xsd:string) "Subdivision of pallium that is located dorsally.") AnnotationAssertion(Annotation( "ISBN:0471888893"^^xsd:string) "The pallium of vertebrates have 3 major divisions, medial, dorsal and lateral, but questions of homology are unresolved.") AnnotationAssertion(Annotation( ) Annotation( ) "DP") AnnotationAssertion( "TAO:0000506") AnnotationAssertion( "ZFA:0000506") AnnotationAssertion( "area dorsalis telencephali, zona dorsalis") AnnotationAssertion( "dorsal zone of dorsal telencephalic area") AnnotationAssertion( "dorsal zone of dorsal telencephalon") AnnotationAssertion( "uberon") AnnotationAssertion( "dorsal zone of D") AnnotationAssertion( "UBERON:0014740") AnnotationAssertion(rdfs:label "dorsal pallium") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lateral pallium) AnnotationAssertion(Annotation( "ISBN:0471888893"^^xsd:string) "Subdivision of pallium that is located laterally.") AnnotationAssertion(Annotation( "ISBN:0471888893"^^xsd:string) "The pallium of vertebrates have 3 major divisions, medial, dorsal and lateral, but questions of homology are unresolved.") AnnotationAssertion(Annotation( ) Annotation( ) "LP") AnnotationAssertion( "DMBA:15956") AnnotationAssertion( "TAO:0000391") AnnotationAssertion( "ZFA:0000391") AnnotationAssertion( "area dorsalis telencephali, zona lateralis") AnnotationAssertion( "lateral zone of D") AnnotationAssertion( "lateral zone of dorsal telencephalic area") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "ISBN:0471888893"^^xsd:string) "medial pallium (everted brain)") AnnotationAssertion(Annotation( "ISBN:0471888893"^^xsd:string) "olfactory pallium") AnnotationAssertion(Annotation( "ISBN:0471888893"^^xsd:string) "piriform pallium") AnnotationAssertion(Annotation( "ISBN:0471888893"^^xsd:string) "proximal pallium (everted brain)") AnnotationAssertion( "UBERON:0014741") AnnotationAssertion(rdfs:label "lateral pallium") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (Wulst) AnnotationAssertion(Annotation( ) "A nuclear complex in the avian telecephalon dorsal to the DVR. The Wulst has telencephalic circuitry similar to the DVR.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0014756") AnnotationAssertion(rdfs:label "Wulst") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (gustatory nucleus) AnnotationAssertion(Annotation( "NeuroNames:1386") "The gustatory nucleus is the enlarged rostral portion of the solitary nucleus, which receives taste afferents from the glossopharyngeal nerve and the intermediate nerve ( Carpenter-1983 ).") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:1386") "dorsal visceral gray") AnnotationAssertion(Annotation( "NeuroNames:1386") "gustatory gray") AnnotationAssertion(Annotation( "NeuroNames:1386") "gustatory nucleus") AnnotationAssertion( "UBERON:0014760") AnnotationAssertion(rdfs:label "gustatory nucleus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (spinal trigeminal tract) AnnotationAssertion(Annotation( ) Annotation( "BTO:0003701") "Brainstem tract formed by the central processes of first-order, trigeminal ganglion neurons that extends from the caudal medulla to the midpons. This tract conveys nociceptive and thermal information from the face to second-order neurons in the spinal nucleus of the trigeminal complex.") AnnotationAssertion( ) AnnotationAssertion( "BAMS:sp5") AnnotationAssertion( "BTO:0003701") AnnotationAssertion( "DHBA:12792") AnnotationAssertion( "DMBA:17797") AnnotationAssertion( "FMA:75700") AnnotationAssertion( "FMA:83851") AnnotationAssertion( "HBA:265505650") AnnotationAssertion( "MBA:794") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:1589") "descending root of V") AnnotationAssertion(Annotation( "NeuroNames:1589") "descending tract of trigeminal") AnnotationAssertion(Annotation( "NeuroNames:1589") "spinal V tract") AnnotationAssertion(Annotation( "NeuroNames:1589") "spinal root of trigeminal") AnnotationAssertion(Annotation( "NeuroNames:1589") "spinal tract of the trigeminal nerve") AnnotationAssertion(Annotation( "NeuroNames:1589") "spinal tract of trigeminal nerve") AnnotationAssertion(Annotation( "NeuroNames:1589") "spinal trigeminal tract") AnnotationAssertion(Annotation( "NeuroNames:1589") "tract of descending root of trigeminal") AnnotationAssertion(Annotation( "NeuroNames:1589") Annotation( ) "tractus spinalis nervi trigeminalis") AnnotationAssertion(Annotation( "NeuroNames:1589") Annotation( ) "tractus spinalis nervi trigemini") AnnotationAssertion(Annotation( "NeuroNames:1589") "trigeminospinal tract") AnnotationAssertion( "UBERON:0014761") AnnotationAssertion(rdfs:label "spinal trigeminal tract") SubClassOf( ) SubClassOf(Annotation( "BTO"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (fused metapodial bones 2-4) AnnotationAssertion(Annotation( ) "An element formed from the fusion of metapodium bones 2, 3 and 4 (i.e. either metatarsals 2-4 or metacarpals 3-4).") AnnotationAssertion( ) AnnotationAssertion(Annotation( ) "fused central metapodials") AnnotationAssertion(Annotation( ) "fused metapodials 2-4") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "metapodial 2+3+4") AnnotationAssertion( "UBERON:0014762") AnnotationAssertion(rdfs:label "fused metapodial bones 2-4") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (fused metatarsal bones 2-4) AnnotationAssertion(Annotation( ) "An element formed from the fusion of metapodium bones 2, 3 and 4 in the pedal autopod.") AnnotationAssertion( ) AnnotationAssertion(Annotation( ) Annotation( "NCBITaxon:51337") "The cannon bone of the 3-toed jerboa (jaculus jaculus) is the postnatal fusion of the 3 central metatarsals, which are distinct ossified elements prenatally") AnnotationAssertion(Annotation( ) "fused central metatarsals") AnnotationAssertion(Annotation( ) "fused metatarsals 2-4") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NCBITaxon:51337") "cannon bone") AnnotationAssertion(Annotation( ) "metatarsal 2+3+4") AnnotationAssertion( "UBERON:0014763") AnnotationAssertion(rdfs:label "fused metatarsal bones 2-4") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (anatomical line along groove) AnnotationAssertion(Annotation( ) Annotation( "ZFA:0001690") "Anatomical line that delineates a furrow or depression in an organ or tissue.") AnnotationAssertion( "AAO:0010276") AnnotationAssertion( "FMA:75037") AnnotationAssertion( "HAO:0001525") AnnotationAssertion( "TAO:0001838") AnnotationAssertion( "line delineating groove") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "ZFA:0001690") "groove") AnnotationAssertion( "UBERON:0014764") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "anatomical line along groove") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (crus of diaphragm) AnnotationAssertion(Annotation( ) "The domain of the diaphragm that is located dorsally and attaches to the vertebrae and surrounds the esophagus and aorta.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0000597") AnnotationAssertion( "EMAPA:17703") AnnotationAssertion( "VHOG:0001546") AnnotationAssertion(Annotation( ) "crural diaphragm") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "crura of the diaphragm") AnnotationAssertion(Annotation( ) "crus of the diaphragm") AnnotationAssertion(Annotation( ) "diaphragm crura") AnnotationAssertion(Annotation( ) "diaphragmatic crura") AnnotationAssertion( "UBERON:0014765") AnnotationAssertion(rdfs:comment "Classification notes: May be considered an external sphincter[PMID:8224664]") AnnotationAssertion(rdfs:label "crus of diaphragm") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (right crus of diaphragm) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A crus of diaphragm that is in_the_right_side_of a diaphragm.") AnnotationAssertion( "https://github.com/obophenotype/uberon/wiki/Modeling-paired-structures-Design-Pattern"^^xsd:anyURI) AnnotationAssertion( ) AnnotationAssertion( "FMA:58286") AnnotationAssertion(Annotation( "FMA:58286") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "crus dextrum (Diaphragma)") AnnotationAssertion(Annotation( "FMA:58286") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "crus dextrum diaphragmatis") AnnotationAssertion(Annotation( "FMA:58286") "external sphincter of esophagus") AnnotationAssertion(Annotation( "FMA:58286") "right crus of diaphragm") AnnotationAssertion(Annotation( "FMA:58286") "right crus of lumbar part of diaphragm") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0014766") AnnotationAssertion(rdfs:label "right crus of diaphragm") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (left crus of diaphragm) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A crus of diaphragm that is in_the_left_side_of a diaphragm.") AnnotationAssertion( "https://github.com/obophenotype/uberon/wiki/Modeling-paired-structures-Design-Pattern"^^xsd:anyURI) AnnotationAssertion( ) AnnotationAssertion( "FMA:58287") AnnotationAssertion(Annotation( "FMA:58287") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "crus sinistrum (Diaphragma)") AnnotationAssertion(Annotation( "FMA:58287") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "crus sinistrum diaphragmatis") AnnotationAssertion(Annotation( "FMA:58287") "left crus of diaphragm") AnnotationAssertion(Annotation( "FMA:58287") "left crus of lumbar part of diaphragm") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0014767") AnnotationAssertion(rdfs:label "left crus of diaphragm") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (superior palpebral vein) AnnotationAssertion(Annotation( ) "A blood vessel that drains from from an upper eyelid.") AnnotationAssertion( "FMA:50907") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "venae palpebrales superiores") AnnotationAssertion( "UBERON:0014768") AnnotationAssertion(rdfs:label "superior palpebral vein") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (palpebral vein) AnnotationAssertion(Annotation( ) "A blood vessel that drains from from an eyelid.") AnnotationAssertion( ) AnnotationAssertion( "FMA:51997") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "palpebral veins") AnnotationAssertion(Annotation( ) "venae palpebrales") AnnotationAssertion( "UBERON:0014769") AnnotationAssertion(rdfs:label "palpebral vein") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (palpebral artery) AnnotationAssertion(Annotation( ) "An artery that supplies blood to an eyelid.") AnnotationAssertion( "In humans, the eyelids are supplied with blood by two arches on each upper and lower lid. The arches are formed by anastamoses of the lateral palpebral arteries and medial palpebral arteries, branching off from the lacrimal artery and ophthalmic artery, respectively. In amphibians, the eyelids may be supplied by branches of the lateral pretrosal arteries.[cjm]") AnnotationAssertion( ) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0014770") AnnotationAssertion(rdfs:label "palpebral artery") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lateral palpebral artery) AnnotationAssertion(Annotation( ) "The lateral palpebral arteries are small arteries which supply the eyelid.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:49940") AnnotationAssertion(Annotation( "FMA:49940") "lateral palpebral branch of ophthalmic artery") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "lateral palpebral branches") AnnotationAssertion( "UBERON:0014772") AnnotationAssertion(rdfs:label "lateral palpebral artery") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) DisjointClasses(Annotation( "lexical"^^xsd:string) ) # Class: (medial palpebral artery) AnnotationAssertion(Annotation( ) "The medial palpebral arteries (internal palpebral arteries) are arteries of the head. They are two in number, superior and inferior, arise from the ophthalmic, opposite the pulley of the Obliquus superior.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:50012") AnnotationAssertion(Annotation( "FMA:50012") "medial palpebral branch of ophthalmic artery") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "inferior palpebral artery") AnnotationAssertion(Annotation( ) "internal palpebral arteries") AnnotationAssertion(Annotation( ) "internal palpebral artery") AnnotationAssertion(Annotation( ) "superior palpebral") AnnotationAssertion(Annotation( ) "superior palpebral artery") AnnotationAssertion( "UBERON:0014773") AnnotationAssertion(rdfs:label "medial palpebral artery") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (prosomere) AnnotationAssertion(Annotation( ) "A neuromere that is part of the presumptive forebrain.") AnnotationAssertion( "forebrain segment") AnnotationAssertion( "segment of forebrain") AnnotationAssertion( "FMA:61996") AnnotationAssertion( "forebrain neuromere") AnnotationAssertion( "uberon") AnnotationAssertion( "future prosencephalon") AnnotationAssertion( "UBERON:0014775") AnnotationAssertion(rdfs:label "prosomere") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (midbrain neuromere) AnnotationAssertion(Annotation( ) "A neuromere that is part of the presumptive midbrain.") AnnotationAssertion( "mesomere") AnnotationAssertion( "midbrain segment") AnnotationAssertion( "segment of midbrain") AnnotationAssertion( "EHDAA2:0004352") AnnotationAssertion( "FMA:61997") AnnotationAssertion( "mesomere of nervous system") AnnotationAssertion( "neuromere of mesomere group") AnnotationAssertion( "uberon") AnnotationAssertion( "future mesencephalon") AnnotationAssertion(Annotation( "EHDAA2:0004352") "mesomere group") AnnotationAssertion( "UBERON:0014776") AnnotationAssertion(rdfs:label "midbrain neuromere") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (spinal neuromere) AnnotationAssertion(Annotation( ) "A neuromere that is part of the presumptive spinal cord.") AnnotationAssertion( "TAO:0001332") AnnotationAssertion( "ZFA:0001332") AnnotationAssertion( "spinal cord metameric segment") AnnotationAssertion(Annotation( "TAO:0001332") Annotation( ) "spinal neuromeres") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "TAO:0001332") "spinal cord segment") AnnotationAssertion( "UBERON:0014777") AnnotationAssertion(rdfs:label "spinal neuromere") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (cell group) AnnotationAssertion(Annotation( "NLX:532") "A group of cells that may not be contained within macroscopic anatomical boundaries, e.g., A9 dopaminergic cell group; massa intercalata of the amygdala (CUMBO).") AnnotationAssertion( "consider adding to CARO.") AnnotationAssertion( "group of cells") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0014778") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "cell group") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (liver reticuloendothelial system) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A reticuloendothelial system that is part of a liver.") AnnotationAssertion( "BTO:0000831") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0014779") AnnotationAssertion(rdfs:label "liver reticuloendothelial system") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (palatine aponeurosis) AnnotationAssertion(Annotation( ) "Attached to the posterior border of the hard palate is a thin, firm fibrous lamella called the palatine aponeurosis, which supports the muscles and gives strength to the soft palate. It is thicker above than below, where it becomes very thin and difficult to define. Laterally it is continuous with the pharyngeal aponeurosis. It serves as the insertion for the Tensor veli palatini and Levator veli palatini, and the origin for the Musculus uvulae, Palatopharyngeus, and Palatoglossus. It provides support for the soft palate.") AnnotationAssertion( ) AnnotationAssertion( "FMA:49429") AnnotationAssertion(Annotation( "FMA:49429") "aponeurosis of tensor veli palatini") AnnotationAssertion(Annotation( ) "aponeurosis palatina") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0014780") AnnotationAssertion(rdfs:label "palatine aponeurosis") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (stomodeal ectoderm) AnnotationAssertion( "BTO:0004224") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0014781") AnnotationAssertion(rdfs:label "stomodeal ectoderm") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (allantois of embryonic urinary system) AnnotationAssertion( "EHDAA2:0000113") AnnotationAssertion( "EMAPA:28547") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "EHDAA2:0000113") "allantois") AnnotationAssertion( "UBERON:0014782") AnnotationAssertion(rdfs:comment "remnant of allantois in embryo") AnnotationAssertion(rdfs:label "allantois of embryonic urinary system") SubClassOf(Annotation( "EHDAA2"^^xsd:string) ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (cloacal muscle) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "Any muscle organ that is part of a cloaca.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0014783") AnnotationAssertion(rdfs:label "cloacal muscle") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (transverse cloacal muscle) AnnotationAssertion(Annotation( ) "A very prominent superficial muscle and with its almost transverse course it forms the boundary between the abdomen and the tail.") AnnotationAssertion(Annotation( ) "m. transversus cloacae") AnnotationAssertion(Annotation( ) "musculus transversus cloacae") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0014784") AnnotationAssertion(rdfs:label "transverse cloacal muscle") SubClassOf( ) # Class: (levator cloacae) AnnotationAssertion(Annotation( ) "A long narrow muscle arising from the underside of feather bulge of the lateral rectrices, inserting near the midline of the cloacal tubercle - phallus.") AnnotationAssertion(Annotation( ) "m. retractor phalli caudalis") AnnotationAssertion(Annotation( ) "musculus levator cloacae") AnnotationAssertion(Annotation( ) "musculus retractor phalli caudalis") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0014785") AnnotationAssertion(rdfs:label "levator cloacae") SubClassOf( ) # Class: (extraembryonic umbilical vein) AnnotationAssertion(Annotation( "VHOG:0000015") "Extraembryonic part of the vein passing through the umbilical cord to the fetus and returning the purified and nutrient blood from the placenta.") AnnotationAssertion( "VHOG:0000015") AnnotationAssertion(Annotation( "VHOG:0000015") "extraembryonic umbilical vein") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0014786") AnnotationAssertion(rdfs:label "extraembryonic umbilical vein") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (left extraembryonic umbilical vein) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An extraembryonic umbilical vein that is in_the_left_side_of a multicellular organism.") AnnotationAssertion( "https://github.com/obophenotype/uberon/wiki/Modeling-paired-structures-Design-Pattern"^^xsd:anyURI) AnnotationAssertion( "EHDAA2:0000938") AnnotationAssertion(Annotation( "EHDAA2:0000938") "extraembryonic umbilical vein left") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0014787") AnnotationAssertion(rdfs:label "left extraembryonic umbilical vein") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (right extraembryonic umbilical vein) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An extraembryonic umbilical vein that is in_the_right_side_of a multicellular organism.") AnnotationAssertion( "https://github.com/obophenotype/uberon/wiki/Modeling-paired-structures-Design-Pattern"^^xsd:anyURI) AnnotationAssertion( "EHDAA2:0001722") AnnotationAssertion(Annotation( "EHDAA2:0001722") "extraembryonic umbilical vein right") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0014788") AnnotationAssertion(rdfs:label "right extraembryonic umbilical vein") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (embryo portion of umbilical vein) AnnotationAssertion(Annotation( "VHOG:0000400") "Vein passing through the umbilical cord to the fetus and returning the purified and nutrient blood from the placenta[VHOG:0000400].") AnnotationAssertion( "VHOG:0000400") AnnotationAssertion(Annotation( "VHOG:0000400") "embryonic umbilical vein") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0014789") AnnotationAssertion(rdfs:label "embryo portion of umbilical vein") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lingual septum) AnnotationAssertion(Annotation( ) "The lingual septum consists of a vertical layer of fibrous tissue, extending throughout the entire length of the median plane of the tongue, though not quite reaching the dorsum. It is thicker behind than in front, and occasionally contains a small fibrocartilage, about 6 mm. in length. It is well displayed by making a vertical section across the organ.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:18274") AnnotationAssertion( "FMA:54813") AnnotationAssertion(Annotation( "FMA:54813") "septum of tongue") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "median fibrous septum") AnnotationAssertion(Annotation( ) "septum of tongue") AnnotationAssertion(Annotation( ) "tongue septum") AnnotationAssertion( "UBERON:0014790") AnnotationAssertion(rdfs:label "lingual septum") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (musculature of forelimb stylopod) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "Any collection of muscles that is part of the forelimb stylopod region [Automatically generated definition].") AnnotationAssertion( "FMA:50202") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:50202") Annotation( ) "arm musculature") AnnotationAssertion(Annotation( "FMA:50202") Annotation( ) "muscle group of arm") AnnotationAssertion(Annotation( "FMA:50202") Annotation( ) "musculature of arm") AnnotationAssertion(Annotation( "FMA:50202") Annotation( ) "set of muscles of arm") AnnotationAssertion( "UBERON:0014791") AnnotationAssertion(rdfs:label "musculature of forelimb stylopod") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (musculature of pelvic complex) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "Any collection of muscles that is part of a pelvic complex. The pelvic complex comprises the pelvic girdle and the associated limb or fin.") AnnotationAssertion( "currently defined by location rather than attachment") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37864") AnnotationAssertion( "FMA:71297") AnnotationAssertion(Annotation( "FMA:71297") "muscles of lower limb") AnnotationAssertion(Annotation( "FMA:71297") "musculature of lower limb") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) "musculi membri inferioris") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0014792") AnnotationAssertion(rdfs:label "musculature of pelvic complex") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (musculature of pectoral complex) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "Any collection of muscles that is part of a pectoral complex. The pectoral complex comprises the pectoral girdle and the associated limb or fin.") AnnotationAssertion( "currently defined by location rather than attachment") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37861") AnnotationAssertion( "FMA:71296") AnnotationAssertion(Annotation( "FMA:71296") "muscles of upper limb") AnnotationAssertion(Annotation( "FMA:71296") "musculature of upper limb") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) "musculi membri superioris") AnnotationAssertion(Annotation( "FMA:71296") "set of muscles of upper limb") AnnotationAssertion(Annotation( "FMA:71296") "upper limb musculature") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0014793") AnnotationAssertion(rdfs:label "musculature of pectoral complex") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pectoral appendage muscle) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "Any muscle organ that is part of a pectoral appendage (forelimb or pectoral fin).") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0014794") AnnotationAssertion(rdfs:label "pectoral appendage muscle") SubClassOf( ) SubClassOf(Annotation( "prolog"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (pelvic appendage muscle) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "Any muscle organ that is part of a pelvic appendage (hindlimb or pelvic fin).") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0014795") AnnotationAssertion(rdfs:label "pelvic appendage muscle") SubClassOf( ) SubClassOf(Annotation( "prolog"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (common tendinous ring) AnnotationAssertion(Annotation( ) "A ring of fibrous tissue surrounding the optic nerve at its entrance at the apex of the orbit.") AnnotationAssertion( ) AnnotationAssertion( "FMA:49071") AnnotationAssertion(Annotation( "FMA:49071") "anulus of Zinn") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) "anulus tendineus communis") AnnotationAssertion(Annotation( "FMA:49071") "common annular tendon") AnnotationAssertion(Annotation( "FMA:49071") "common anular tendon") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "annulus of Zinn") AnnotationAssertion(Annotation( ) "annulus tendineus communis") AnnotationAssertion(Annotation( ) "anulus tendineus") AnnotationAssertion(Annotation( ) "anulus tendineus communis") AnnotationAssertion(Annotation( ) "common tendinous ring") AnnotationAssertion(Annotation( ) "ligament of Zinn") AnnotationAssertion(Annotation( ) "tendon of Zinn") AnnotationAssertion( "UBERON:0014796") AnnotationAssertion(rdfs:label "common tendinous ring") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (hypobranchial group muscle) AnnotationAssertion(Annotation( "ISBN:0073040584"^^xsd:string) "A jaw muscle that arises from trunk somites and is innervated by spinal nerves.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0014797") AnnotationAssertion(rdfs:label "hypobranchial group muscle") AnnotationAssertion(Annotation(rdfs:comment "We follow Kardong in having a general grouping for jaw musculature from trunk somites - we call this hypobranchial group muscle to avoid a clash with the more specific teleost muscle") rdfs:seeAlso ) SubClassOf( ) SubClassOf(Annotation( "ISBN:0073040584"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "ISBN:0073040584"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (clavotrapezius muscle) AnnotationAssertion(Annotation( ) "The most anterior of the trapezius muscles, found in felids, it is also the largest. Its fibers run obliquely to the ventral surface. Its origin is the superior nuchal line and median dorsal line and its insertion is the clavicle. Its action is to draw the clavicle dorsally and towards the head.") AnnotationAssertion( ) AnnotationAssertion( "clavotrapezius") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0014798") AnnotationAssertion(rdfs:label "clavotrapezius muscle") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (acromiotrapezius muscle) AnnotationAssertion(Annotation( ) "Acromiotrapezius is the middle trapezius muscle. It covers the dorsal and lateral surfaces of the scapula. Its origin is the neural spines of the cervical vertebrae and its insertion is in the metacromion process and fascia of the clavotrapezius. Its action is to draw the scapula to the dorsal, and hold the two scapula together.") AnnotationAssertion( ) AnnotationAssertion( "acromiotrapezius") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0014799") AnnotationAssertion(rdfs:label "acromiotrapezius muscle") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (spinotrapezius muscle) AnnotationAssertion(Annotation( ) "Spinotrapezius, also called thoracic trapezius, is the most posterior of the three trapezius muscles. It is triangular shaped. Posterior to the acromiotrapezius and overlaps latissimus dorsi on the front. Its origin is the neural spines of the thoracic vertebrae and its insertion is the scapular fascia. Its action is to draw the scapula to the dorsal and caudal regions.") AnnotationAssertion( ) AnnotationAssertion( "spinotrapezius") AnnotationAssertion( "thoracic trapezius") AnnotationAssertion( "thoracic trapezius muscle") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0014800") AnnotationAssertion(rdfs:label "spinotrapezius muscle") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (nuchal line attachment site) AnnotationAssertion(Annotation( ) Annotation( ) "Any of the four curved lines on the external surface of the occipital bone that serves as an attachment site for a muscle.") AnnotationAssertion( "in FMA this is modeled as an immaterial entity") AnnotationAssertion( ) AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "nuchal line") AnnotationAssertion( "UBERON:0014801") AnnotationAssertion(rdfs:label "nuchal line attachment site") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (highest nuchal line attachment site) AnnotationAssertion(Annotation( ) "Of the nuchal lines, the upper, often faintly marked, is named the highest nuchal line, but is sometimes referred to as the Mempin Line, and to it the galea aponeurotica is attached.") AnnotationAssertion( "FMA:53106") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "Mempin line") AnnotationAssertion(Annotation( "FMA:53106") "highest nuchal line") AnnotationAssertion( "UBERON:0014802") AnnotationAssertion(rdfs:label "highest nuchal line attachment site") SubClassOf( ) # Class: (superior nuchal line attachment site) AnnotationAssertion(Annotation( ) "Of the nuchal lines, the one below the highest nuchal line is the superior nuchal line. To it is attached the Occipitalis muscle, the Splenius capitis muscle, the trapezius muscle, and the Sternocleidomastoid muscle.") AnnotationAssertion( "FMA:53108") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:53108") "superior nuchal line") AnnotationAssertion( "UBERON:0014803") AnnotationAssertion(rdfs:label "superior nuchal line attachment site") SubClassOf( ) # Class: (median nuchal line attachment site) AnnotationAssertion(Annotation( ) "Of the nuchal lines, the one that runs from the external occipital protuberance a ridge or crest is the median nuchal line, often faintly marked, descends to the foramen magnum, and affords attachment to the ligamentum nuchae.") AnnotationAssertion( "FMA:53111") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:53111") "inferior nuchal line") AnnotationAssertion( "UBERON:0014804") AnnotationAssertion(rdfs:label "median nuchal line attachment site") SubClassOf( ) # Class: (inferior nuchal line attachment site) AnnotationAssertion(Annotation( ) "Of the nuchal lines, the one running from the middle of the median line is the inferior nuchal line. Attached are the Obliquus capitis superior muscle, Rectus capitis posterior major muscle, and Rectus capitis posterior minor muscle.") AnnotationAssertion( "FMA:53111") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:53111") "inferior nuchal line") AnnotationAssertion( "UBERON:0014805") AnnotationAssertion(rdfs:label "inferior nuchal line attachment site") SubClassOf( ) # Class: (serratus muscle) AnnotationAssertion( "serratus") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:35769") AnnotationAssertion( "MA:0003025") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0014835") AnnotationAssertion(rdfs:label "serratus muscle") SubClassOf(Annotation( "MA"^^xsd:string) ) # Class: (levator arcuum muscle) AnnotationAssertion( "levator arcuum") AnnotationAssertion( "levatores arcuum") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0014836") AnnotationAssertion(rdfs:label "levator arcuum muscle") SubClassOf(Annotation( "ISBN:0073040584"^^xsd:string) ) # Class: (pectoantebrachialis) AnnotationAssertion(Annotation( "ISBN:0073040584"^^xsd:string) "The most superficial of pectoral muscles, found in some mammals.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0014837") AnnotationAssertion(rdfs:label "pectoantebrachialis") SubClassOf(Annotation( "ISBN:0073040584"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (xiphihumeralis) AnnotationAssertion(Annotation( "ISBN:0073040584"^^xsd:string) "The most deep of pectoral muscles, found in some mammals.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0014838") AnnotationAssertion(rdfs:label "xiphihumeralis") SubClassOf(Annotation( "ISBN:0073040584"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (puboischiofemoralis muscle) AnnotationAssertion(Annotation( "ISBN:0073040584"^^xsd:string) "A dorsal muscle of lower tetrapods.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0014842") AnnotationAssertion(rdfs:label "puboischiofemoralis muscle") SubClassOf( ) SubClassOf(Annotation( "ISBN:0073040584"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "ISBN:0073040584"^^xsd:string) ObjectSomeValuesFrom( )) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (vastus intermedius) AnnotationAssertion(Annotation( ) "The Vastus intermedius (Cruraeus) arises from the front and lateral surfaces of the body of the femur in its upper two-thirds, sitting under Rectus Femoris and from the lower part of the lateral intermuscular septum. Its fibers end in a superficial aponeurosis, which forms the deep part of the Quadriceps femoris tendon. The Vastus medialis and Vastus intermedius appear to be inseparably united, but when the Rectus femoris has been reflected a narrow interval will be observed extending upward from the medial border of the patella between the two muscles, and the separation may be continued as far as the lower part of the intertrochanteric line, where, however, the two muscles are frequently continuous.") AnnotationAssertion(Annotation( "BTO:0002542") "Origin: anterior and lateral surfaces of femur; insertion: patella, common tendon of quadriceps femoris; innervation: femoral; action, extends leg[BTO:0002542].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0002542") AnnotationAssertion( "EMAPA:36243") AnnotationAssertion( "FMA:22433") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "cruraeus") AnnotationAssertion(Annotation( "BTO:0002542") "crureus") AnnotationAssertion(Annotation( "BTO:0002542") "intermediate great muscle") AnnotationAssertion(Annotation( "BTO:0002542") "intermediate vastus muscle") AnnotationAssertion(Annotation( "BTO:0002542") "musculus vastus intermedius") AnnotationAssertion(Annotation( ) "vastus intermedialis") AnnotationAssertion(Annotation( ) "vastus intermedius") AnnotationAssertion( "UBERON:0014847") AnnotationAssertion(rdfs:label "vastus intermedius") SubClassOf( ) SubClassOf(Annotation( "ISBN:0073040584"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "dbpedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (tendon of quadriceps femoris) AnnotationAssertion( ) AnnotationAssertion( "FMA:46900") AnnotationAssertion( "common tendon of quadriceps femoris") AnnotationAssertion(Annotation( "FMA:46900") "quadriceps femoris tendon") AnnotationAssertion(Annotation( "FMA:46900") "quadriceps tendon") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:46900") "common quadriceps femoris tendon") AnnotationAssertion(Annotation( "FMA:46900") "common quadriceps tendon") AnnotationAssertion(Annotation( "FMA:46900") "common tendon of quadriceps femoris muscle complex") AnnotationAssertion( "UBERON:0014848") AnnotationAssertion(rdfs:label "tendon of quadriceps femoris") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (hemotrichorial placental membrane) AnnotationAssertion(Annotation( ) Annotation( "MP:0012126") "A placental membrane that consists of three trophoblast cell layers.") AnnotationAssertion(Annotation( "MP"^^xsd:string) ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37879") AnnotationAssertion(Annotation( "MP:0012126") "placenta hemotrichorial membrane") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0014849") AnnotationAssertion(rdfs:label "hemotrichorial placental membrane") SubClassOf( ) DisjointClasses( ) # Class: (hemomonochorial placental membrane) AnnotationAssertion(Annotation( ) Annotation( "MP:0012126") "A placental membrane that consists of a single layer of syncytiotrophoblast at term.") AnnotationAssertion(Annotation( "MP"^^xsd:string) ) AnnotationAssertion(Annotation( "MP:0012126") "placenta hemomonochorial membrane") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0014850") AnnotationAssertion(rdfs:label "hemomonochorial placental membrane") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (chorda tendinea of left ventricle) AnnotationAssertion(Annotation( "FMA:9349") "Chorda tendinea which is attached to the leaflet of mitral valve and is continuous with the endocardium of papillary muscle of left ventricle.") AnnotationAssertion( "FMA:9349") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0014851") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "chorda tendinea of left ventricle") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (chorda tendinea of right ventricle) AnnotationAssertion(Annotation( "FMA:9300") "Chorda tendinea which is attached to the leaflet of tricuspid valve and is continuous with the endocardium of papillary muscle of right ventricle.") AnnotationAssertion( "FMA:9300") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0014852") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "chorda tendinea of right ventricle") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (commissural leaflet of mitral valve) AnnotationAssertion(Annotation( "FMA:223086") "Leaflet of mitral valve which is attached to the commissural chorda tendinea of left ventricle.") AnnotationAssertion( "FMA:223086") AnnotationAssertion(Annotation( "FMA:223086") "commissural cusp of mitral valve") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0014853") AnnotationAssertion(rdfs:label "commissural leaflet of mitral valve") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (anterior leaflet of mitral valve) AnnotationAssertion(Annotation( "FMA:7242") "Leaflet of mitral valve which is attached to the anterior head of the posterior papillary muscle of left ventricle through the chorda tendinea of the left ventricle.") AnnotationAssertion(Annotation( "BGEE:ANiknejad") "anterior leaflet") AnnotationAssertion(Annotation( "BGEE:ANiknejad") "anteromedial leaflet") AnnotationAssertion( ) AnnotationAssertion( "FMA:7242") AnnotationAssertion(Annotation( "FMA:7242") "anterior cusp of mitral valve") AnnotationAssertion(Annotation( "FMA:7242") "anterior mitral leaflet") AnnotationAssertion(Annotation( "FMA:7242") "anteromedial leaflet of mitral valve") AnnotationAssertion(Annotation( "FMA:7242") "aortic leaflet of mitral valve") AnnotationAssertion(Annotation( "BGEE:ANiknejad") "aortic leaflet of the left-sided mitral valve") AnnotationAssertion(Annotation( "FMA:7242") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "cuspis anterior valvae atrioventricularis sinistri") AnnotationAssertion(Annotation( "FMA:7242") "greater leaflet of mitral valve") AnnotationAssertion(Annotation( "FMA:7242") "septal leaflet of mitral valve") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0014854") AnnotationAssertion(rdfs:label "anterior leaflet of mitral valve") SubClassOf(Annotation( "FMA"^^xsd:string) ) DisjointClasses(Annotation( "lexical"^^xsd:string) ) # Class: (posterior leaflet of mitral valve) AnnotationAssertion(Annotation( "FMA:7243") "Leaflet of mitral valve which is attached to the posterior head of the lateral papillary muscle of left ventricle through the chorda tendinea of the left ventricle.") AnnotationAssertion( ) AnnotationAssertion( "FMA:7243") AnnotationAssertion(Annotation( "FMA:7243") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "cuspis posterior (valva mitralis)") AnnotationAssertion(Annotation( "FMA:7243") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "cuspis posterior valvae atrioventricularis sinistri") AnnotationAssertion(Annotation( "FMA:7243") "mural leaflet of mitral valve") AnnotationAssertion(Annotation( "FMA:7243") "posterior cusp of mitral valve") AnnotationAssertion(Annotation( "FMA:7243") "posterior mitral leaflet") AnnotationAssertion(Annotation( "FMA:7243") "posterolateral leaflet of mitral valve") AnnotationAssertion(Annotation( "FMA:7243") "smaller leaflet of mitral valve") AnnotationAssertion(Annotation( "FMA:7243") "ventricular leaflet of mitral valve") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0014855") AnnotationAssertion(rdfs:label "posterior leaflet of mitral valve") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (cysticercus stage) AnnotationAssertion(Annotation( ) Annotation( "BTO:0003168") "The larval form of any of the Taenia tapeworms.") AnnotationAssertion( "BTO:0003168") AnnotationAssertion( "MESH:B01.500.736.215.895.286") AnnotationAssertion(Annotation( "BTO:0003168") "cysticercus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0014856") AnnotationAssertion(rdfs:label "cysticercus stage") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (zoea stage) AnnotationAssertion(Annotation( ) "A crustacean larval stage characterised by the use of the thoracic appendages for swimming.") AnnotationAssertion( "uberon") AnnotationAssertion( "zoea") AnnotationAssertion( "UBERON:0014857") AnnotationAssertion(rdfs:label "zoea stage") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (crustacean post-larval stage) AnnotationAssertion(Annotation( ) "A crustacean larval stage characterised by the use of abdominal appendages (pleopods) for propulsion.") AnnotationAssertion( "BTO:0002655") AnnotationAssertion( "glaucothoe stage (hermit crab)") AnnotationAssertion( "parva stage (shrimp)") AnnotationAssertion( "uberon") AnnotationAssertion( "post-larva") AnnotationAssertion( "post-larval") AnnotationAssertion( "post-larval stage") AnnotationAssertion( "postlarva") AnnotationAssertion( "UBERON:0014858") AnnotationAssertion(rdfs:label "crustacean post-larval stage") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (megalopa stage) AnnotationAssertion(Annotation( ) "The crustacean post-larval stage of a crab.") AnnotationAssertion( "Consider merging into parent") AnnotationAssertion( "uberon") AnnotationAssertion( "megalopa") AnnotationAssertion( "UBERON:0014859") AnnotationAssertion(rdfs:label "megalopa stage") SubClassOf( ) # Class: (copepodite stage) AnnotationAssertion(Annotation( ) "A development stage of copepods which follows the nauplius stage. It is segmented with more than 3 pairs of appendages.") AnnotationAssertion( "uberon") AnnotationAssertion( "copepodite") AnnotationAssertion( "UBERON:0014860") AnnotationAssertion(rdfs:label "copepodite stage") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (glaucothoe stage) AnnotationAssertion(Annotation( ) "A developmental stage in a hermit crab that has completed the swimming larval stages.") AnnotationAssertion( "uberon") AnnotationAssertion( "glaucothoe") AnnotationAssertion( "UBERON:0014861") AnnotationAssertion(rdfs:label "glaucothoe stage") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (trochophore stage) AnnotationAssertion(Annotation( ) "A larval stage of a trochozoan in which the organism is in free-swimming planktonic form with several bands of cilia[WP,modified].") AnnotationAssertion( ) AnnotationAssertion( "uberon") AnnotationAssertion( "trochophore") AnnotationAssertion( "trocophore") AnnotationAssertion( "UBERON:0014862") AnnotationAssertion(rdfs:label "trochophore stage") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (veliger stage) AnnotationAssertion(Annotation( ) "The characteristic larval stage of the gastropod, bivalve and scaphopod taxonomic classes. It is produced following either the embryonic or trochophore larval stage of development.") AnnotationAssertion( ) AnnotationAssertion( "uberon") AnnotationAssertion( "veliger") AnnotationAssertion( "UBERON:0014863") AnnotationAssertion(rdfs:label "veliger stage") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (caterpillar stage) AnnotationAssertion(Annotation( ) "The larval stage of members of the order Lepidoptera.") AnnotationAssertion( ) AnnotationAssertion( "uberon") AnnotationAssertion( "caterpillar") AnnotationAssertion( "UBERON:0014864") AnnotationAssertion(rdfs:label "caterpillar stage") SubClassOf( ) # Class: (inferior orbital fissure) AnnotationAssertion(Annotation( ) "The orbital fissure that is situated inferiorly between the greater wing of the sphenoid bone and the maxilla.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:54802") AnnotationAssertion( "uberon") AnnotationAssertion( "infraorbital fissure") AnnotationAssertion( "sphenomaxillary fissure") AnnotationAssertion( "UBERON:0014870") AnnotationAssertion(rdfs:label "inferior orbital fissure") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (distal epiphysis of distal phalanx of pedal digit 1) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A distal epiphysis that is part of a distal phalanx of pedal digit 1.") AnnotationAssertion( "FMA:33036") AnnotationAssertion(Annotation( "FMA:33036") "distal end of distal phalanx of big toe") AnnotationAssertion(Annotation( "FMA:33036") "distal epiphysis of distal phalanx of big toe") AnnotationAssertion(Annotation( ) Annotation( ) "distal epiphysis of distal phalanx of pedal digit I") AnnotationAssertion(Annotation( "FMA:33036") "head of distal phalanx of big toe") AnnotationAssertion(Annotation( "FMA:33036") "head of distal phalanx of first digit of foot") AnnotationAssertion(Annotation( "FMA:33036") "head of distal phalanx of great toe") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:33036") "ungual tuberosity of distal phalanx of big toe") AnnotationAssertion( "UBERON:0014871") AnnotationAssertion(rdfs:label "distal epiphysis of distal phalanx of pedal digit 1") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (distal epiphysis of distal phalanx of pedal digit 2) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A distal epiphysis that is part of a distal phalanx of pedal digit 2.") AnnotationAssertion( "FMA:33045") AnnotationAssertion(Annotation( "FMA:33045") "distal end of distal phalanx of second toe") AnnotationAssertion(Annotation( ) Annotation( ) "distal epiphysis of distal phalanx of pedal digit II") AnnotationAssertion(Annotation( "FMA:33045") "distal epiphysis of distal phalanx of second toe") AnnotationAssertion(Annotation( "FMA:33045") "head of distal phalanx of second toe") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:33045") "ungual tuberosity of distal phalanx of second toe") AnnotationAssertion( "UBERON:0014872") AnnotationAssertion(rdfs:label "distal epiphysis of distal phalanx of pedal digit 2") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (distal epiphysis of distal phalanx of pedal digit 3) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A distal epiphysis that is part of a distal phalanx of pedal digit 3.") AnnotationAssertion( "FMA:33054") AnnotationAssertion(Annotation( "FMA:33054") "distal end of distal phalanx of third toe") AnnotationAssertion(Annotation( ) Annotation( ) "distal epiphysis of distal phalanx of pedal digit III") AnnotationAssertion(Annotation( "FMA:33054") "distal epiphysis of distal phalanx of third toe") AnnotationAssertion(Annotation( "FMA:33054") "head of distal phalanx of third digit of foot") AnnotationAssertion(Annotation( "FMA:33054") "head of distal phalanx of third toe") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:33054") "ungual tuberosity of distal phalanx of third toe") AnnotationAssertion( "UBERON:0014873") AnnotationAssertion(rdfs:label "distal epiphysis of distal phalanx of pedal digit 3") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (distal epiphysis of distal phalanx of pedal digit 4) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A distal epiphysis that is part of a distal phalanx of pedal digit 4.") AnnotationAssertion( "FMA:33091") AnnotationAssertion(Annotation( "FMA:33091") "distal end of distal phalanx of fourth toe") AnnotationAssertion(Annotation( "FMA:33091") "distal epiphysis of distal phalanx of fourth toe") AnnotationAssertion(Annotation( ) Annotation( ) "distal epiphysis of distal phalanx of pedal digit IV") AnnotationAssertion(Annotation( "FMA:33091") "head of distal phalanx of fourth digit of foot") AnnotationAssertion(Annotation( "FMA:33091") "head of distal phalanx of fourth toe") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:33091") "ungal tuberosity of distal phalanx of fourth toe") AnnotationAssertion( "UBERON:0014874") AnnotationAssertion(rdfs:label "distal epiphysis of distal phalanx of pedal digit 4") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (distal epiphysis of distal phalanx of pedal digit 5) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A distal epiphysis that is part of a distal phalanx of pedal digit 5.") AnnotationAssertion( "FMA:33106") AnnotationAssertion(Annotation( "FMA:33106") "distal end of distal phalanx of little toe") AnnotationAssertion(Annotation( "FMA:33106") "distal epiphysis of distal phalanx of little toe") AnnotationAssertion(Annotation( ) Annotation( ) "distal epiphysis of distal phalanx of pedal digit V") AnnotationAssertion(Annotation( "FMA:33106") "head of distal phalanx of fifth digit of foot") AnnotationAssertion(Annotation( "FMA:33106") "head of distal phalanx of fifth toe") AnnotationAssertion(Annotation( "FMA:33106") "head of distal phalanx of little toe") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:33106") "ungual tuberosity of distal phalanx of fifth toe") AnnotationAssertion( "UBERON:0014875") AnnotationAssertion(rdfs:label "distal epiphysis of distal phalanx of pedal digit 5") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (distal epiphysis of distal phalanx of pedal digit) AnnotationAssertion( "distal end of distal phalanx of toe") AnnotationAssertion( "head of distal phalanx of digit of foot") AnnotationAssertion( "head of distal phalanx of digit of pes") AnnotationAssertion( "head of distal phalanx of toe") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0014876") AnnotationAssertion(rdfs:label "distal epiphysis of distal phalanx of pedal digit") SubClassOf( ) SubClassOf( ) SubClassOf( ) # Class: (distal epiphysis of distal phalanx of manual digit 1) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A distal epiphysis that is part of a distal phalanx of manual digit 1.") AnnotationAssertion( ) AnnotationAssertion( "FMA:37609") AnnotationAssertion(Annotation( "FMA:37609") "distal end of phalanx of right thumb") AnnotationAssertion(Annotation( ) Annotation( ) "distal epiphysis of distal phalanx of manual digit I") AnnotationAssertion(Annotation( "FMA:37609") "distal epiphysis of distal phalanx of thumb") AnnotationAssertion(Annotation( "FMA:37609") "head of distal phalanx of first digit of hand") AnnotationAssertion(Annotation( "FMA:37609") "head of distal phalanx of thumb") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:37609") "ungual tuberosity of distal phalanx of thumb") AnnotationAssertion( "UBERON:0014881") AnnotationAssertion(rdfs:label "distal epiphysis of distal phalanx of manual digit 1") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (distal epiphysis of distal phalanx of manual digit 2) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A distal epiphysis that is part of a distal phalanx of manual digit 2.") AnnotationAssertion( ) AnnotationAssertion( "FMA:37621") AnnotationAssertion(Annotation( "FMA:37621") "distal end of distal phalanx of index finger") AnnotationAssertion(Annotation( "FMA:37621") "distal end of distal phalanx of second finger") AnnotationAssertion(Annotation( "FMA:37621") "distal epiphysis of distal phalanx of index finger") AnnotationAssertion(Annotation( ) Annotation( ) "distal epiphysis of distal phalanx of manual digit II") AnnotationAssertion(Annotation( "FMA:37621") "head of distal phalanx of index finger") AnnotationAssertion(Annotation( "FMA:37621") "head of distal phalanx of second finger") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:37621") "ungual tuberosity of distal phalanx of index finger") AnnotationAssertion( "UBERON:0014882") AnnotationAssertion(rdfs:label "distal epiphysis of distal phalanx of manual digit 2") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (distal epiphysis of distal phalanx of manual digit 3) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A distal epiphysis that is part of a distal phalanx of manual digit 3.") AnnotationAssertion( ) AnnotationAssertion( "FMA:37633") AnnotationAssertion(Annotation( "FMA:37633") "distal end of distal phalanx of middle finger") AnnotationAssertion(Annotation( "FMA:37633") "distal end of distal phalanx of third finger") AnnotationAssertion(Annotation( ) Annotation( ) "distal epiphysis of distal phalanx of manual digit III") AnnotationAssertion(Annotation( "FMA:37633") "distal epiphysis of distal phalanx of middle finger") AnnotationAssertion(Annotation( "FMA:37633") "head of distal phalanx of middle finger") AnnotationAssertion(Annotation( "FMA:37633") "head of distal phalanx of third digit of hand") AnnotationAssertion(Annotation( "FMA:37633") "head of distal phalanx of third finger") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:37633") "ungual tuberosity of distal phalanx of middle finger") AnnotationAssertion( "UBERON:0014883") AnnotationAssertion(rdfs:label "distal epiphysis of distal phalanx of manual digit 3") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (distal epiphysis of distal phalanx of manual digit 4) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A distal epiphysis that is part of a distal phalanx of manual digit 4.") AnnotationAssertion( ) AnnotationAssertion( "FMA:37645") AnnotationAssertion(Annotation( "FMA:37645") "distal end of distal phalanx of fourth finger") AnnotationAssertion(Annotation( "FMA:37645") "distal end of distal phalanx of ring finger") AnnotationAssertion(Annotation( ) Annotation( ) "distal epiphysis of distal phalanx of manual digit IV") AnnotationAssertion(Annotation( "FMA:37645") "distal epiphysis of distal phalanx of ring finger") AnnotationAssertion(Annotation( "FMA:37645") "head of distal phalanx of fourth digit of hand") AnnotationAssertion(Annotation( "FMA:37645") "head of distal phalanx of fourth finger") AnnotationAssertion(Annotation( "FMA:37645") "head of distal phalanx of ring finger") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:37645") "ungual tuberosity of distal phalanx of ring finger") AnnotationAssertion( "UBERON:0014884") AnnotationAssertion(rdfs:label "distal epiphysis of distal phalanx of manual digit 4") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (distal epiphysis of distal phalanx of manual digit 5) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A distal epiphysis that is part of a distal phalanx of manual digit 5.") AnnotationAssertion( ) AnnotationAssertion( "FMA:37657") AnnotationAssertion(Annotation( "FMA:37657") "distal end of distal phalanx of fifth finger") AnnotationAssertion(Annotation( "FMA:37657") "distal end of distal phalanx of little finger") AnnotationAssertion(Annotation( "FMA:37657") "distal epiphysis of distal phalanx of little finger") AnnotationAssertion(Annotation( ) Annotation( ) "distal epiphysis of distal phalanx of manual digit V") AnnotationAssertion(Annotation( "FMA:37657") "head of distal phalanx of fifth digit of hand") AnnotationAssertion(Annotation( "FMA:37657") "head of distal phalanx of fifth finger") AnnotationAssertion(Annotation( "FMA:37657") "head of distal phalanx of little finger") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:37657") "ungual tuberosity of distal phalanx of little finger") AnnotationAssertion( "UBERON:0014885") AnnotationAssertion(rdfs:label "distal epiphysis of distal phalanx of manual digit 5") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (distal epiphysis of distal phalanx of manual digit) AnnotationAssertion( ) AnnotationAssertion( "distal end of distal phalanx of finger") AnnotationAssertion( "head of distal phalanx of digit of hand") AnnotationAssertion( "head of distal phalanx of digit of manus") AnnotationAssertion( "head of distal phalanx of finger") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0014886") AnnotationAssertion(rdfs:label "distal epiphysis of distal phalanx of manual digit") SubClassOf( ) SubClassOf( ) SubClassOf( ) # Class: (distal epiphysis of distal phalanx of digit) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A distal epiphysis that is part of a distal phalanx.") AnnotationAssertion( "distal end of distal phalanx of digit") AnnotationAssertion( "head of distal phalanx") AnnotationAssertion( "head of distal phalanx of digit") AnnotationAssertion( "head of distal phalanx of digit of autopod") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0014887") AnnotationAssertion(rdfs:label "distal epiphysis of distal phalanx of digit") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (left hemisphere of cerebellum) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A cerebellar hemisphere that is in_the_left_side_of a cerebellum.") AnnotationAssertion( "https://github.com/obophenotype/uberon/wiki/Modeling-paired-structures-Design-Pattern"^^xsd:anyURI) AnnotationAssertion( "FMA:83877") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0014889") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "left hemisphere of cerebellum") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (right hemisphere of cerebellum) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A cerebellar hemisphere that is in_the_right_side_of a cerebellum.") AnnotationAssertion( "https://github.com/obophenotype/uberon/wiki/Modeling-paired-structures-Design-Pattern"^^xsd:anyURI) AnnotationAssertion( "FMA:83876") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0014890") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "right hemisphere of cerebellum") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (brainstem white matter) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "White matter that is part of a brainstem [Automatically generated definition].") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:35189") AnnotationAssertion( "FMA:282112") AnnotationAssertion( "MA:0002741") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "EMAPA:35189") "brain stem white matter") AnnotationAssertion( "brainstem tract/commissure") AnnotationAssertion( "brainstem tracts") AnnotationAssertion( "brainstem tracts and commissures") AnnotationAssertion( "UBERON:0014891") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "brainstem white matter") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (skeletal muscle organ) AnnotationAssertion(Annotation( "GOC:dos") "A muscle organ that consists of skeletal muscle tissue ensheathed in epimysium, that develops from myotome and that is innervated by some somatic motor neuron. Skeletal muscles are typically attached (via a tendon) to a bone but there are exceptions (e.g. intrinsic tongue muscles).") AnnotationAssertion( "skeletal muscle") AnnotationAssertion( "AAO:0011099") AnnotationAssertion( "BTO:0001103") AnnotationAssertion( "CALOHA:TS-0933") AnnotationAssertion( "EFO:0000888") AnnotationAssertion( "EHDAA:5035") AnnotationAssertion( "EHDAA:5043") AnnotationAssertion( "EHDAA:5978") AnnotationAssertion( "EHDAA:5984") AnnotationAssertion( "EMAPA:35988") AnnotationAssertion( "EV:0100377") AnnotationAssertion( "GAID:141") AnnotationAssertion( "MA:0003148") AnnotationAssertion( "MAT:0000302") AnnotationAssertion( "MESH:D018482") AnnotationAssertion( "MIAA:0000302") AnnotationAssertion( "OpenCyc:Mx4rv2kf-5wpEbGdrcN5Y29ycA") AnnotationAssertion( "TAO:0005277") AnnotationAssertion( "VHOG:0000319") AnnotationAssertion( "XAO:0000174") AnnotationAssertion( "ZFA:0005277") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0014892") AnnotationAssertion(rdfs:label "skeletal muscle organ") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lamina terminalis of ischium) AnnotationAssertion(Annotation( "AAO:0000881") Annotation( "AAO:LAP") "In those cases in which the interilial region is broadly expanded and the pubis is extremely reduced, the anterior margin of the ischium forms an expanded area.") AnnotationAssertion( "AAO:0000881") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0014898") AnnotationAssertion(rdfs:label "lamina terminalis of ischium") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "AAO"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (anterolateral ligament of knee) AnnotationAssertion(Annotation( ) Annotation( ) "A ligament on the lateral aspect of the human knee, anterior to the fibular collateral ligament.") AnnotationAssertion( ) AnnotationAssertion(Annotation( ) "(mid-third) lateral capsular ligament") AnnotationAssertion(Annotation( ) Annotation( ) "ALL") AnnotationAssertion(Annotation( ) "anterolateral ligament") AnnotationAssertion(Annotation( ) "capsulo-osseous layer of the iliotibial band") AnnotationAssertion(Annotation( ) "ligament of Segond") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0014899") AnnotationAssertion(rdfs:label "anterolateral ligament of knee") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (primordial vasculature) AnnotationAssertion(Annotation( "ZFA:0005076") Annotation( "ZFA:curator") "A portion of tissue that will develop into vasculature.") AnnotationAssertion( "EFO:0003708") AnnotationAssertion( "TAO:0005076") AnnotationAssertion( "ZFA:0005076") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0014903") AnnotationAssertion(rdfs:label "primordial vasculature") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (intersegmental pulmonary vein) AnnotationAssertion(Annotation( ) "A vein receiving blood from adjacent bronchopulmonary segments; it emerges from the inferior margin of a segment to become a tributary of a branch of a pulmonary vein.") AnnotationAssertion( "FMA:76965") AnnotationAssertion(Annotation( ) "infrasegmental part of pulmonary vein") AnnotationAssertion(Annotation( ) "intersegmental part of pulmonary vein") AnnotationAssertion(Annotation( ) Annotation( ) "partes intersegmentales venarum pulmonum") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "infrasegmental part") AnnotationAssertion(Annotation( ) "intersegmental vein") AnnotationAssertion( "UBERON:0014904") AnnotationAssertion(rdfs:label "intersegmental pulmonary vein") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (intersomitic vessel) AnnotationAssertion(Annotation( "MGI:anna"^^xsd:string) "One of the primary blood vessel sprouts that originate from the dorsal aorta and posterior cardinal vein and align dorsoventrally at the myotomal boundaries between somites.") AnnotationAssertion(Annotation( "ZFA:0001285, ZFIN:ZDB-PUB-030908-4") "Blood vessels that connect the dorsal aorta or the posterior cardinal vein and the dorsal longitudinal anastomotic vessel. They run along the vertical myotomal boundaries. At early stages these don't have venous or arterial markers[ZFA:0001285, ZFIN:ZDB-PUB-030908-4].") AnnotationAssertion( "EFO:0003664") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37389") AnnotationAssertion( "TAO:0001285") AnnotationAssertion( "XAO:0004075") AnnotationAssertion( "ZFA:0001285") AnnotationAssertion(Annotation( "ZFA:0001285") "intersegmental vessel") AnnotationAssertion(Annotation( "ZFA:0001285") Annotation( ) "intersegmental vessels") AnnotationAssertion(Annotation( "XAO:0004075") "intersomitic blood vessel") AnnotationAssertion(Annotation( "ZFA:0001285") Annotation( ) "intersomitic vessels") AnnotationAssertion(Annotation( "ZFA:0001285") "segmental vessel") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0014907") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "intersomitic vessel") SubClassOf(Annotation( "ZFA"^^xsd:string) ) SubClassOf(Annotation( "ZFA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (cerebellopontine angle) AnnotationAssertion(Annotation( "MESH:A08.186.211.132.810.428.200.462") "Junction between the cerebellum and the pons.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:84358") AnnotationAssertion( "MESH:D002530") AnnotationAssertion( "NCIT:C54057") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:544") Annotation( ) "angulus cerebellopontinus") AnnotationAssertion(Annotation( "MESH:A08.186.211.132.810.428.200.462") "cerebellopontile angle") AnnotationAssertion(Annotation( "MESH:A08.186.211.132.810.428.200.462") "cerebellopontine angle") AnnotationAssertion(Annotation( "NeuroNames:544") "cerebellopontine angle") AnnotationAssertion( "UBERON:0014908") AnnotationAssertion(rdfs:label "cerebellopontine angle") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (thalamic eminence) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Part of the forebrain that is ventral to the ventral thalamus and dorsal to the preoptic area. See page 44 of the Atlas of Early Zebrafish Brain Development[ZFIN:curator].") AnnotationAssertion(Annotation( ) Annotation( ) "EMT") AnnotationAssertion( "FMA:295507") AnnotationAssertion( "TAO:0007010") AnnotationAssertion( "XAO:0004301") AnnotationAssertion( "ZFA:0007010") AnnotationAssertion(Annotation( "ZFA:0007010") Annotation( ) "eminentia thalami") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0014912") AnnotationAssertion(rdfs:label "thalamic eminence") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (ventral pallium) AnnotationAssertion(Annotation( ) "The pallial region located next to the pallium-subpallium boundary.") AnnotationAssertion(Annotation( ) Annotation( ) "VP") AnnotationAssertion( "DMBA:15904") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0014913") AnnotationAssertion(rdfs:label "ventral pallium") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (haemolymphatic fluid-testis barrier) AnnotationAssertion(Annotation( ) "A barrier between the blood or haemolymphatic fluid and the testes.") AnnotationAssertion( ) AnnotationAssertion(Annotation( ) "blood testis barrier") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0014914") AnnotationAssertion(rdfs:label "haemolymphatic fluid-testis barrier") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (genu of facial nerve) AnnotationAssertion(Annotation( ) "The bend in the facial nerve at the lateral end of the internal acoustic meatus.") AnnotationAssertion(Annotation( "FMA:72510") "first genu") AnnotationAssertion( ) AnnotationAssertion( "DHBA:12738") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37870") AnnotationAssertion( "FMA:72510") AnnotationAssertion( "MBA:1116") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) "genu nervi facialis") AnnotationAssertion(Annotation( "FMA:72510") "internal genu of facial nerve") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:581") "first genu") AnnotationAssertion(Annotation( "NeuroNames:581") Annotation( ) "genu internum n. faciales") AnnotationAssertion(Annotation( "NeuroNames:581") Annotation( ) "genu nervi facialis") AnnotationAssertion(Annotation( "NeuroNames:581") "genu of facial nerve") AnnotationAssertion(Annotation( "NeuroNames:581") "genu of the facial nerve") AnnotationAssertion(Annotation( "NeuroNames:581") "internal genu") AnnotationAssertion(Annotation( "NeuroNames:581") "internal genu of facial nerve") AnnotationAssertion(Annotation( "NeuroNames:581") "internal genu of the facial nerve") AnnotationAssertion(Annotation( "NeuroNames:581") Annotation( ) "nervus facialis (genu)") AnnotationAssertion( "UBERON:0014915") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "genu of facial nerve") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (velar vocal fold) AnnotationAssertion(Annotation( ) "On of a pair of medial protrusions of the intra-pharyngeal ostium (an oval opening within the soft palate that connects the oral and nasal portions of the pharynx), used in vocalization in Koalas.") AnnotationAssertion( ) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0014916") AnnotationAssertion(rdfs:comment "Muscle notes: Because the larynx is attached to the caudal end of the pharynx where the IPO is situated, laryngeal retraction brought about by the sternothyroid muscle will automatically put tension on the rostro-caudally oriented velar vocal folds, and could also induce length changes of the folds. Contractions of the palatopharyngeal muscles may also influence the length and shape of the velar vocal folds directly (inducing width changes of the IPO).") AnnotationAssertion(rdfs:label "velar vocal fold") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (retrosplenial granular cortex) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37947") AnnotationAssertion( "MBA:886") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:1802") "retrosplenial area, ventral part") AnnotationAssertion(Annotation( "NeuroNames:1802") "retrosplenial cortex, ventral part") AnnotationAssertion(Annotation( "NeuroNames:1802") "retrosplenial granular area") AnnotationAssertion(Annotation( "NeuroNames:1802") "retrosplenial granular cortex") AnnotationAssertion(Annotation( "NeuroNames:1802") "ventral part of the retrosplenial area") AnnotationAssertion( "UBERON:0014918") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "retrosplenial granular cortex") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (perivascular space) AnnotationAssertion(Annotation( ) Annotation( "ncithesaurus:Perivascular_Space") "The space between a blood vessel and the pia mater.") AnnotationAssertion(Annotation( ) Annotation( ) "VRS") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "NCIT:C83196") AnnotationAssertion(Annotation( ) "Virchow-Robin space") AnnotationAssertion( "perivascular region") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "perivascular spaces") AnnotationAssertion( "UBERON:0014930") AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "VRS belonging to the subarachnoid space are continuous with VRS of the subpial space. The direct communication between VRS of the subarachnoid space and the subpial space is unique to the brain's arteries, as no leptomeningeal layers surround the brain's veins[WP]") AnnotationAssertion(rdfs:label "perivascular space") AnnotationAssertion( "https://static-content.springer.com/image/art%3A10.1007%2Fs11064-015-1581-6/MediaObjects/11064_2015_1581_Fig3_HTML.gif"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (periungual skin) AnnotationAssertion(Annotation( ) "A zone of skin adjacent to a nail or claw.") AnnotationAssertion( ) AnnotationAssertion( "uberon") AnnotationAssertion( "periungual area") AnnotationAssertion( "periungual region") AnnotationAssertion( "UBERON:0014931") AnnotationAssertion(rdfs:label "periungual skin") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (periventricular white matter) AnnotationAssertion( ) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0014932") AnnotationAssertion(rdfs:label "periventricular white matter") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (periventricular gray matter) AnnotationAssertion( ) AnnotationAssertion( "periventricular grey matter") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0014933") AnnotationAssertion(rdfs:label "periventricular gray matter") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete cerebral cortex mantle layer) AnnotationAssertion( "UBERON:0004040") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0014934") AnnotationAssertion(rdfs:label "obsolete cerebral cortex mantle layer") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (cerebral cortex marginal layer) AnnotationAssertion(Annotation( ) Annotation( "MP:0000792") "Developing superficial cortical layer located just under the pia matter, develops from the marginal layer of the neural tube and becomes cortical layer I.") AnnotationAssertion( "in humans develops into cortical layer I") AnnotationAssertion(Annotation( "EMAPA"^^xsd:string) "EMAPA temporally divides this into zone and layer. TODO - unify this with marginal layers in EHDAA2") AnnotationAssertion(Annotation( "BRAINSPAN:BRAINSPAN") Annotation( ) "MZ") AnnotationAssertion(Annotation( "MP:0000792") Annotation( ) "MZ") AnnotationAssertion(Annotation( "PBA:294021774") "marginal zone") AnnotationAssertion( "EMAPA:17546") AnnotationAssertion( "EMAPA:32713") AnnotationAssertion( "PBA:294021774") AnnotationAssertion(Annotation( ) "cortical marginal layer") AnnotationAssertion(Annotation( "MP:0000792") "cortical marginal zone") AnnotationAssertion(Annotation( ) "future cortical layer I") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "EMAPA:32713") "cerebral cortex marginal zone") AnnotationAssertion( "UBERON:0014935") AnnotationAssertion(rdfs:label "cerebral cortex marginal layer") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (cerebral cortex ventricular layer) AnnotationAssertion( "EMAPA:17547") AnnotationAssertion( "EMAPA:32707") AnnotationAssertion( "MA:0003189") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "EMAPA:32707") "cerebral cortex ventricular zone") AnnotationAssertion( "UBERON:0014936") AnnotationAssertion(rdfs:label "cerebral cortex ventricular layer") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (cerebral cortex subventricular zone) AnnotationAssertion(Annotation( "BRAINSPAN:BRAINSPAN") Annotation( ) "SZ") AnnotationAssertion( "EMAPA:32704") AnnotationAssertion( "MA:0003188") AnnotationAssertion( "PBA:294021970") AnnotationAssertion( "uberon") AnnotationAssertion( "cerebral cortex subventricular zone") AnnotationAssertion( "UBERON:0014940") AnnotationAssertion(rdfs:label "cerebral cortex subventricular zone") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (layer of developing cerebral cortex) AnnotationAssertion( "these layers primarily refer to the mammalian future neocortex") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0014950") AnnotationAssertion(rdfs:label "layer of developing cerebral cortex") SubClassOf( ) SubClassOf(Annotation( "EMAPA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (proisocortex) AnnotationAssertion(Annotation( "BRAINSPAN:BRAINSPAN") "The part of the neocortex hich mainly consists of parts of cingulate, parahippocampal and temporopolar cortice. As distinct from isocortex (typical neocortex) which contains other regions.") AnnotationAssertion( ) AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:2311") "intermediate belt") AnnotationAssertion(Annotation( "NeuroNames:2311") "juxtallocortex") AnnotationAssertion(Annotation( "NeuroNames:2311") "periisocortical belt") AnnotationAssertion(Annotation( "NeuroNames:2311") "proisocortex") AnnotationAssertion(Annotation( "NeuroNames:2311") "proisocortical belt") AnnotationAssertion( "UBERON:0014951") AnnotationAssertion(rdfs:label "proisocortex") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (radius endochondral element) AnnotationAssertion(Annotation( ) Annotation( "UBERON:mah") "The major preaxial endrochondral skeletal element in the anterior zeugopod.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( ) "radius skeletal element") AnnotationAssertion(Annotation( ) "radius element") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0015001") AnnotationAssertion(rdfs:label "radius endochondral element") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (radius-ulna endochondral element) AnnotationAssertion(Annotation( ) "A radius-ulna bone or its cartilage or pre-cartilage precursor.") AnnotationAssertion(Annotation( ) "radius-ulna skeletal element") AnnotationAssertion(Annotation( ) "radius-ulna element") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0015002") AnnotationAssertion(rdfs:label "radius-ulna endochondral element") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (ulna endochondral element) AnnotationAssertion(Annotation( ) Annotation( "UBERON:mah") "Major postaxial endrochondral skeletal element in the anterior zeugopod.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( ) "ulna skeletal element") AnnotationAssertion(Annotation( ) "ulna element") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0015003") AnnotationAssertion(rdfs:comment "The corresponding element in the posterior fin/limb is the fibula.") AnnotationAssertion(rdfs:label "ulna endochondral element") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (tibia endochondral element) AnnotationAssertion(Annotation( ) Annotation( "PHENOSCAPE:mah") "The major preaxial endochondral element in the posterior zeugopod[Phenoscape].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( ) "tibia skeletal element") AnnotationAssertion(Annotation( ) "tibia element") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0015004") AnnotationAssertion(rdfs:label "tibia endochondral element") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (cervical vertebra endochondral element) AnnotationAssertion(Annotation( ) "A vertebral endochondral element in the cervical region of the vertebral column.") AnnotationAssertion(Annotation( ) "cervical vertebra skeletal element") AnnotationAssertion(Annotation( ) "cervical vertebra element") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0015007") AnnotationAssertion(rdfs:label "cervical vertebra endochondral element") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (thoracic vertebra endochondral element) AnnotationAssertion(Annotation( ) "A vertebral endochondral element in the thoracic region of the vertebral column.") AnnotationAssertion(Annotation( ) "thoracic vertebra skeletal element") AnnotationAssertion(Annotation( ) "thoracic vertebra element") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0015008") AnnotationAssertion(rdfs:label "thoracic vertebra endochondral element") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lumbar vertebra endochondral element) AnnotationAssertion(Annotation( ) "A lumbar vertebra bone or its cartilage or pre-cartilage precursor.") AnnotationAssertion(Annotation( ) "lumbar vertebra skeletal element") AnnotationAssertion(Annotation( ) "lumbar vertebra element") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0015009") AnnotationAssertion(rdfs:label "lumbar vertebra endochondral element") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (sacral vertebra endochondral element) AnnotationAssertion(Annotation( ) "A vertebra endochondral element that is part of the sacral region of the vertebral column.") AnnotationAssertion(Annotation( ) "sacral vertebra skeletal element") AnnotationAssertion(Annotation( ) "sacral vertebra element") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0015010") AnnotationAssertion(rdfs:label "sacral vertebra endochondral element") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (tibiotarsus endochondral element) AnnotationAssertion(Annotation( ) "A tibiotarsus bone or its cartilage or pre-cartilage precursor.") AnnotationAssertion(Annotation( ) "tibiotarsus skeletal element") AnnotationAssertion(Annotation( ) "tibiotarsus element") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0015011") AnnotationAssertion(rdfs:label "tibiotarsus endochondral element") SubClassOf( ) # Class: (tarsometatarsus endochondral element) AnnotationAssertion(Annotation( ) "A tarsometatarsus bone or its cartilage or pre-cartilage precursor.") AnnotationAssertion(Annotation( ) "tarsometatarsus skeletal element") AnnotationAssertion(Annotation( ) "tarsometatarsus element") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0015012") AnnotationAssertion(rdfs:label "tarsometatarsus endochondral element") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (fibula endochondral element) AnnotationAssertion(Annotation( ) Annotation( "PHENOSCAPE:mah") "The major postaxial endochondral element in the posterior zeugopod[Phenoscape].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( ) "fibula skeletal element") AnnotationAssertion(Annotation( ) "fibula element") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0015013") AnnotationAssertion(rdfs:label "fibula endochondral element") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (calcaneum endochondral element) AnnotationAssertion(Annotation( ) "A calcaneum bone or its cartilage or pre-cartilage precursor.") AnnotationAssertion(Annotation( ) "calcaneum skeletal element") AnnotationAssertion(Annotation( ) "calcaneum element") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0015014") AnnotationAssertion(rdfs:label "calcaneum endochondral element") SubClassOf( ) # Class: (supraoccipital endochondral element) AnnotationAssertion(Annotation( ) "A supraoccipital bone or its cartilage or pre-cartilage precursor.") AnnotationAssertion(Annotation( ) "supraoccipital skeletal element") AnnotationAssertion(Annotation( ) "supraoccipital element") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0015015") AnnotationAssertion(rdfs:label "supraoccipital endochondral element") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (stapes endochondral element) AnnotationAssertion(Annotation( ) "A stapes bone or its cartilage or pre-cartilage precursor.") AnnotationAssertion(Annotation( ) "stapes skeletal element") AnnotationAssertion(Annotation( ) "stapes element") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0015016") AnnotationAssertion(rdfs:label "stapes endochondral element") SubClassOf( ) # Class: (incus endochondral element) AnnotationAssertion(Annotation( ) "An incus bone or its cartilage or pre-cartilage precursor.") AnnotationAssertion(Annotation( ) "incus skeletal element") AnnotationAssertion(Annotation( ) "incus element") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0015017") AnnotationAssertion(rdfs:label "incus endochondral element") SubClassOf( ) # Class: (malleus endochondral element) AnnotationAssertion(Annotation( ) "A malleus bone or its cartilage or pre-cartilage precursor.") AnnotationAssertion(Annotation( ) "malleus skeletal element") AnnotationAssertion(Annotation( ) "malleus element") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "malleus") AnnotationAssertion( "UBERON:0015018") AnnotationAssertion(rdfs:label "malleus endochondral element") SubClassOf( ) # Class: (rib endochondral element) AnnotationAssertion(Annotation( ) "A rib bone or its cartilage or pre-cartilage precursor.") AnnotationAssertion( "Humans have 24 ribs (12 pairs). The first seven sets of ribs, known as 'true ribs', are directly attached to the sternum through the costal cartilage. The following five sets are known as 'false ribs', three of these sharing a common cartilaginous connection to the sternum, while the last two (eleventh and twelfth ribs) are termed floating ribs (costae fluitantes) or vertebral ribs. They are attached to the vertebrae only, and not to the sternum or cartilage coming off of the sternum. Some people are missing one of the two pairs of floating ribs, while others have a third pair. Rib removal is the surgical excision of ribs for therapeutic or cosmetic reasons. In fish, there are often two sets of ribs attached to the vertebral column. One set, the dorsal ribs, are found in the dividing septum between the upper and lower parts of the main muscle segments, projecting roughly sideways from the vertebral column. The second set, of ventral ribs arise from the vertebral column just below the dorsal ribs, and enclose the lower body, often joining at the tips. Not all species possess both types of rib, with the dorsal ribs being most commonly absent. Sharks, for example, have no dorsal ribs, and only very short ventral ribs, while lampreys have no ribs at all. In some teleosts, there may be additional rib-like bones within the muscle mass. Tetrapods, however, only ever have a single set of ribs which are probably homologous with the dorsal ribs of fishes. In the early tetrapods, every vertebra bore a pair of ribs, although those on the thoracic vertebrae are typically the longest. The sacral ribs were stout and short, since they formed part of the pelvis, connecting the backbone to the hip bones.[1] In most subsequent forms, many of these early ribs have been lost, and in living amphibians and reptiles, there is great variation in rib structure and number. For example, turtles have only eight pairs of ribs, which are developed into a bony or cartilagenous carapace and plastron, while snakes have numerous ribs running along the full length of their trunk. Frogs typically have no ribs, aside from a sacral pair, which form part of the pelvis.[1]. In birds, ribs are present as distinct bones only on the thoracic region, although small fused ribs are present on the cervical vertebrae. The thoracic ribs of birds possess a wide projection to the rear; this uncinate process is an attachment for the shoulder muscles.[1]. Mammals usually also only have distinct ribs on the thoracic vertebra, although fixed cervical ribs are also present in monotremes. In marsupials and placental mammals, the cervical and lumbar ribs are found only as tiny remnants fused to the vertebrae, where they are referred to as transverse processes. In general, the structure and number of the true ribs in humans is similar to that in other mammals. Unlike reptiles, caudal ribs are never found in mammals.") AnnotationAssertion(Annotation( ) "rib skeletal element") AnnotationAssertion(Annotation( ) "rib element") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0015019") AnnotationAssertion(rdfs:label "rib endochondral element") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete otic capsule endochondral element) AnnotationAssertion( "UBERON:0004637") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0015020") AnnotationAssertion(rdfs:label "obsolete otic capsule endochondral element") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (forelimb endochondral element) AnnotationAssertion(Annotation( ) "A forelimb bone or its cartilage or pre-cartilage precursor.") AnnotationAssertion(Annotation( ) "forelimb skeletal element") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0015021") AnnotationAssertion(rdfs:label "forelimb endochondral element") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (hindlimb endochondral element) AnnotationAssertion(Annotation( ) "A hindlimb bone or its cartilage or pre-cartilage precursor.") AnnotationAssertion(Annotation( ) "hindlimb bone skeletal element") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0015022") AnnotationAssertion(rdfs:label "hindlimb endochondral element") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (phalanx endochondral element) AnnotationAssertion(Annotation( ) "A phalanx bone or its cartilage or pre-cartilage precursor.") AnnotationAssertion(Annotation( ) "phalanx skeletal element") AnnotationAssertion(Annotation( ) "phalanx element") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0015023") AnnotationAssertion(rdfs:label "phalanx endochondral element") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (manual digit phalanx endochondral element) AnnotationAssertion(Annotation( ) "A manual digit phalanx bone or its cartilage or pre-cartilage precursor.") AnnotationAssertion(Annotation( ) "manual digit phalanx skeletal element") AnnotationAssertion(Annotation( ) "manual digit phalanx element") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0015024") AnnotationAssertion(rdfs:label "manual digit phalanx endochondral element") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (manual digit 1 phalanx endochondral element) AnnotationAssertion(Annotation( ) "A manual digit 1 phalanx bone or its cartilage or pre-cartilage precursor.") AnnotationAssertion(Annotation( ) "manual digit 1 phalanx skeletal element") AnnotationAssertion(Annotation( ) "manual digit 1 phalanx element") AnnotationAssertion(Annotation( ) Annotation( ) "manual digit I phalanx endochondral element") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0015025") AnnotationAssertion(rdfs:label "manual digit 1 phalanx endochondral element") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (manual digit 2 phalanx endochondral element) AnnotationAssertion(Annotation( ) "A manual digit 2 phalanx bone or its cartilage or pre-cartilage precursor.") AnnotationAssertion(Annotation( ) "manual digit 2 phalanx skeletal element") AnnotationAssertion(Annotation( ) "manual digit 2 phalanx element") AnnotationAssertion(Annotation( ) Annotation( ) "manual digit II phalanx endochondral element") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0015026") AnnotationAssertion(rdfs:label "manual digit 2 phalanx endochondral element") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (manual digit 3 phalanx endochondral element) AnnotationAssertion(Annotation( ) "A manual digit 3 phalanx bone or its cartilage or pre-cartilage precursor.") AnnotationAssertion(Annotation( ) "manual digit 3 phalanx skeletal element") AnnotationAssertion(Annotation( ) "manual digit 3 phalanx element") AnnotationAssertion(Annotation( ) Annotation( ) "manual digit III phalanx endochondral element") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0015027") AnnotationAssertion(rdfs:label "manual digit 3 phalanx endochondral element") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (manual digit 4 phalanx endochondral element) AnnotationAssertion(Annotation( ) "A manual digit 4 phalanx bone or its cartilage or pre-cartilage precursor.") AnnotationAssertion(Annotation( ) "manual digit 4 phalanx skeletal element") AnnotationAssertion(Annotation( ) "manual digit 4 phalanx element") AnnotationAssertion(Annotation( ) Annotation( ) "manual digit IV phalanx endochondral element") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0015028") AnnotationAssertion(rdfs:label "manual digit 4 phalanx endochondral element") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (manual digit 5 phalanx endochondral element) AnnotationAssertion(Annotation( ) "A manual digit 5 phalanx bone or its cartilage or pre-cartilage precursor.") AnnotationAssertion(Annotation( ) "manual digit 5 phalanx skeletal element") AnnotationAssertion(Annotation( ) "manual digit 5 phalanx element") AnnotationAssertion(Annotation( ) Annotation( ) "manual digit V phalanx endochondral element") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0015029") AnnotationAssertion(rdfs:label "manual digit 5 phalanx endochondral element") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pedal digit phalanx endochondral element) AnnotationAssertion(Annotation( ) "A pedal digit phalanx bone or its cartilage or pre-cartilage precursor.") AnnotationAssertion(Annotation( ) "pedal digit phalanx skeletal element") AnnotationAssertion(Annotation( ) "pedal digit phalanx element") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0015030") AnnotationAssertion(rdfs:label "pedal digit phalanx endochondral element") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pedal digit 1 phalanx endochondral element) AnnotationAssertion(Annotation( ) "A pedal digit 1 phalanx bone or its cartilage or pre-cartilage precursor.") AnnotationAssertion(Annotation( ) "pedal digit 1 phalanx skeletal element") AnnotationAssertion(Annotation( ) "pedal digit 1 phalanx element") AnnotationAssertion(Annotation( ) Annotation( ) "pedal digit I phalanx endochondral element") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0015031") AnnotationAssertion(rdfs:label "pedal digit 1 phalanx endochondral element") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pedal digit 2 phalanx endochondral element) AnnotationAssertion(Annotation( ) "A pedal digit 2 phalanx bone or its cartilage or pre-cartilage precursor.") AnnotationAssertion(Annotation( ) "pedal digit 2 phalanx skeletal element") AnnotationAssertion(Annotation( ) "pedal digit 2 phalanx element") AnnotationAssertion(Annotation( ) Annotation( ) "pedal digit II phalanx endochondral element") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0015032") AnnotationAssertion(rdfs:label "pedal digit 2 phalanx endochondral element") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pedal digit 3 phalanx endochondral element) AnnotationAssertion(Annotation( ) "A pedal digit 3 phalanx bone or its cartilage or pre-cartilage precursor.") AnnotationAssertion(Annotation( ) "pedal digit 3 phalanx skeletal element") AnnotationAssertion(Annotation( ) "pedal digit 3 phalanx element") AnnotationAssertion(Annotation( ) Annotation( ) "pedal digit III phalanx endochondral element") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0015033") AnnotationAssertion(rdfs:label "pedal digit 3 phalanx endochondral element") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pedal digit 4 phalanx endochondral element) AnnotationAssertion(Annotation( ) "A pedal digit 4 phalanx bone or its cartilage or pre-cartilage precursor.") AnnotationAssertion(Annotation( ) "pedal digit 4 phalanx skeletal element") AnnotationAssertion(Annotation( ) "pedal digit 4 phalanx element") AnnotationAssertion(Annotation( ) Annotation( ) "pedal digit IV phalanx endochondral element") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0015034") AnnotationAssertion(rdfs:label "pedal digit 4 phalanx endochondral element") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pedal digit 5 phalanx endochondral element) AnnotationAssertion(Annotation( ) "A pedal digit 5 phalanx bone or its cartilage or pre-cartilage precursor.") AnnotationAssertion(Annotation( ) "pedal digit 5 phalanx skeletal element") AnnotationAssertion(Annotation( ) "pedal digit 5 phalanx element") AnnotationAssertion(Annotation( ) Annotation( ) "pedal digit V phalanx endochondral element") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0015035") AnnotationAssertion(rdfs:label "pedal digit 5 phalanx endochondral element") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pedal digit metatarsal endochondral element) AnnotationAssertion(Annotation( ) "A pedal digit metatarsal bone or its cartilage or pre-cartilage precursor.") AnnotationAssertion(Annotation( ) "pedal digit metatarsal skeletal element") AnnotationAssertion(Annotation( ) "pedal digit metatarsal element") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0015036") AnnotationAssertion(rdfs:label "pedal digit metatarsal endochondral element") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pedal digit 1 metatarsal endochondral element) AnnotationAssertion(Annotation( ) "A pedal digit 1 metatarsal bone or its cartilage or pre-cartilage precursor.") AnnotationAssertion(Annotation( ) "pedal digit 1 metatarsal skeletal element") AnnotationAssertion(Annotation( ) "pedal digit 1 metatarsal element") AnnotationAssertion(Annotation( ) Annotation( ) "pedal digit I metatarsal endochondral element") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0015037") AnnotationAssertion(rdfs:label "pedal digit 1 metatarsal endochondral element") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pedal digit 2 metatarsal endochondral element) AnnotationAssertion(Annotation( ) "A pedal digit 2 metatarsal bone or its cartilage or pre-cartilage precursor.") AnnotationAssertion(Annotation( ) "pedal digit 2 metatarsal skeletal element") AnnotationAssertion(Annotation( ) "pedal digit 2 metatarsal element") AnnotationAssertion(Annotation( ) Annotation( ) "pedal digit II metatarsal endochondral element") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0015038") AnnotationAssertion(rdfs:label "pedal digit 2 metatarsal endochondral element") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pedal digit 3 metatarsal endochondral element) AnnotationAssertion(Annotation( ) "A pedal digit 3 metatarsal bone or its cartilage or pre-cartilage precursor.") AnnotationAssertion(Annotation( ) "pedal digit 3 metatarsal skeletal element") AnnotationAssertion(Annotation( ) "pedal digit 3 metatarsal element") AnnotationAssertion(Annotation( ) Annotation( ) "pedal digit III metatarsal endochondral element") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0015039") AnnotationAssertion(rdfs:label "pedal digit 3 metatarsal endochondral element") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pedal digit 4 metatarsal endochondral element) AnnotationAssertion(Annotation( ) "A pedal digit 4 metatarsal bone or its cartilage or pre-cartilage precursor.") AnnotationAssertion(Annotation( ) "pedal digit 4 metatarsal skeletal element") AnnotationAssertion(Annotation( ) "pedal digit 4 metatarsal element") AnnotationAssertion(Annotation( ) Annotation( ) "pedal digit IV metatarsal endochondral element") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0015040") AnnotationAssertion(rdfs:label "pedal digit 4 metatarsal endochondral element") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pedal digit 5 metatarsal endochondral element) AnnotationAssertion(Annotation( ) "A pedal digit 5 metatarsal bone or its cartilage or pre-cartilage precursor.") AnnotationAssertion(Annotation( ) "pedal digit 5 metatarsal skeletal element") AnnotationAssertion(Annotation( ) "pedal digit 5 metatarsal element") AnnotationAssertion(Annotation( ) Annotation( ) "pedal digit V metatarsal endochondral element") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0015041") AnnotationAssertion(rdfs:label "pedal digit 5 metatarsal endochondral element") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (manual digit metacarpus endochondral element) AnnotationAssertion(Annotation( ) "A manual digit metacarpus bone or its cartilage or pre-cartilage precursor.") AnnotationAssertion(Annotation( ) "manual digit metacarpus skeletal element") AnnotationAssertion(Annotation( ) "manual digit metacarpus element") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0015042") AnnotationAssertion(rdfs:label "manual digit metacarpus endochondral element") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (manual digit 1 metacarpus endochondral element) AnnotationAssertion(Annotation( ) "A manual digit 1 metacarpus bone or its cartilage or pre-cartilage precursor.") AnnotationAssertion(Annotation( ) "manual digit 1 metacarpus skeletal element") AnnotationAssertion(Annotation( ) "manual digit 1 metacarpus element") AnnotationAssertion(Annotation( ) Annotation( ) "manual digit I metacarpus endochondral element") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0015043") AnnotationAssertion(rdfs:label "manual digit 1 metacarpus endochondral element") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (manual digit 2 metacarpus endochondral element) AnnotationAssertion(Annotation( ) "A manual digit 2 metacarpus bone or its cartilage or pre-cartilage precursor.") AnnotationAssertion(Annotation( ) "manual digit 2 metacarpus skeletal element") AnnotationAssertion(Annotation( ) "manual digit 2 metacarpus element") AnnotationAssertion(Annotation( ) Annotation( ) "manual digit II metacarpus endochondral element") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0015044") AnnotationAssertion(rdfs:label "manual digit 2 metacarpus endochondral element") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (manual digit 3 metacarpus endochondral element) AnnotationAssertion(Annotation( ) "A manual digit 3 metacarpus bone or its cartilage or pre-cartilage precursor.") AnnotationAssertion(Annotation( ) "manual digit 3 metacarpus skeletal element") AnnotationAssertion(Annotation( ) "manual digit 3 metacarpus element") AnnotationAssertion(Annotation( ) Annotation( ) "manual digit III metacarpus endochondral element") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0015045") AnnotationAssertion(rdfs:label "manual digit 3 metacarpus endochondral element") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (manual digit 4 metacarpus endochondral element) AnnotationAssertion(Annotation( ) "A manual digit 4 metacarpus bone or its cartilage or pre-cartilage precursor.") AnnotationAssertion(Annotation( ) "manual digit 4 metacarpus skeletal element") AnnotationAssertion(Annotation( ) "manual digit 4 metacarpus element") AnnotationAssertion(Annotation( ) Annotation( ) "manual digit IV metacarpus endochondral element") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0015046") AnnotationAssertion(rdfs:label "manual digit 4 metacarpus endochondral element") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (manual digit 5 metacarpus endochondral element) AnnotationAssertion(Annotation( ) "A manual digit 5 metacarpus bone or its cartilage or pre-cartilage precursor.") AnnotationAssertion(Annotation( ) "manual digit 5 metacarpus skeletal element") AnnotationAssertion(Annotation( ) "manual digit 5 metacarpus element") AnnotationAssertion(Annotation( ) Annotation( ) "manual digit V metacarpus endochondral element") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0015047") AnnotationAssertion(rdfs:label "manual digit 5 metacarpus endochondral element") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (basioccipital endochondral element) AnnotationAssertion(Annotation( ) "A basioccipital bone or its cartilage or pre-cartilage precursor.") AnnotationAssertion(Annotation( ) "basioccipital skeletal element") AnnotationAssertion(Annotation( ) "basioccipital element") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0015048") AnnotationAssertion(rdfs:label "basioccipital endochondral element") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (carpus endochondral element) AnnotationAssertion(Annotation( ) "A carpus bone or its cartilage or pre-cartilage precursor.") AnnotationAssertion(Annotation( ) "carpus skeletal element") AnnotationAssertion(Annotation( ) "carpus element") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0015049") AnnotationAssertion(rdfs:label "carpus endochondral element") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (tarsus endochondral element) AnnotationAssertion(Annotation( ) "A tarsus bone or its cartilage or pre-cartilage precursor.") AnnotationAssertion(Annotation( ) "tarsus skeletal element") AnnotationAssertion(Annotation( ) "tarsus element") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0015050") AnnotationAssertion(rdfs:label "tarsus endochondral element") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (exoccipital endochondral element) AnnotationAssertion(Annotation( ) "An exoccipital bone or its cartilage or pre-cartilage precursor.") AnnotationAssertion(Annotation( ) "exoccipital skeletal element") AnnotationAssertion(Annotation( ) "exoccipital element") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0015051") AnnotationAssertion(rdfs:label "exoccipital endochondral element") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (femur endochondral element) AnnotationAssertion(Annotation( ) "A femur bone or its cartilage or pre-cartilage precursor.") AnnotationAssertion(Annotation( ) "femur skeletal element") AnnotationAssertion(Annotation( ) "femur element") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0015052") AnnotationAssertion(rdfs:label "femur endochondral element") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (humerus endochondral element) AnnotationAssertion(Annotation( ) "A humerus bone or its cartilage or pre-cartilage precursor.") AnnotationAssertion(Annotation( ) "humerus skeletal element") AnnotationAssertion(Annotation( ) "humerus element") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0015053") AnnotationAssertion(rdfs:label "humerus endochondral element") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (iliac endochondral element) AnnotationAssertion(Annotation( ) "An iliac bone or its cartilage or pre-cartilage precursor.") AnnotationAssertion(Annotation( ) "iliac skeletal element") AnnotationAssertion(Annotation( ) "iliac element") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0015054") AnnotationAssertion(rdfs:label "iliac endochondral element") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pubic endochondral element) AnnotationAssertion(Annotation( ) "A pubic bone or its cartilage or pre-cartilage precursor.") AnnotationAssertion(Annotation( ) "pubic skeletal element") AnnotationAssertion(Annotation( ) "pubic element") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0015055") AnnotationAssertion(rdfs:label "pubic endochondral element") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (ischial endochondral element) AnnotationAssertion(Annotation( ) "An ischial bone or its cartilage or pre-cartilage precursor.") AnnotationAssertion(Annotation( ) "ischial skeletal element") AnnotationAssertion(Annotation( ) "ischial element") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0015056") AnnotationAssertion(rdfs:label "ischial endochondral element") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (scapula endochondral element) AnnotationAssertion(Annotation( ) "A scapula bone or its cartilage or pre-cartilage precursor.") AnnotationAssertion(Annotation( ) "scapula skeletal element") AnnotationAssertion(Annotation( ) "scapula element") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0015057") AnnotationAssertion(rdfs:label "scapula endochondral element") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (alisphenoid endochondral element) AnnotationAssertion(Annotation( ) "An alisphenoid bone or its cartilage or pre-cartilage precursor.") AnnotationAssertion(Annotation( ) "alisphenoid skeletal element") AnnotationAssertion(Annotation( ) "alisphenoid element") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0015058") AnnotationAssertion(rdfs:label "alisphenoid endochondral element") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (orbitosphenoid endochondral element) AnnotationAssertion(Annotation( ) "An orbitosphenoid bone or its cartilage or pre-cartilage precursor.") AnnotationAssertion(Annotation( ) "orbitosphenoid skeletal element") AnnotationAssertion(Annotation( ) "orbitosphenoid element") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0015059") AnnotationAssertion(rdfs:label "orbitosphenoid endochondral element") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (sphenoid endochondral element) AnnotationAssertion(Annotation( ) "A sphenoid bone or its cartilage or pre-cartilage precursor.") AnnotationAssertion(Annotation( ) "sphenoid bone skeletal element") AnnotationAssertion(Annotation( ) "sphenoid element") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0015060") AnnotationAssertion(rdfs:label "sphenoid endochondral element") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (limb endochondral element) AnnotationAssertion(Annotation( ) "A limb bone or its cartilage or pre-cartilage precursor.") AnnotationAssertion(Annotation( ) "limb bone skeletal element") AnnotationAssertion(Annotation( ) "limb bone endochondral element") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0015061") AnnotationAssertion(rdfs:label "limb endochondral element") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (bone condensation) AnnotationAssertion(Annotation( "AEO:0000213") Annotation( "AEO:JB"^^xsd:string) "A delimited region of osteoblasts representing the early stages of bone formation.") AnnotationAssertion( "AEO:0000213") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0015062") AnnotationAssertion(rdfs:label "bone condensation") SubClassOf(Annotation( "AEO"^^xsd:string) ) SubClassOf(Annotation( "AEO"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (autopod endochondral element) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An endochondral element that is part of a autopod region.") AnnotationAssertion( ) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0015063") AnnotationAssertion(rdfs:label "autopod endochondral element") SubClassOf( ) SubClassOf(Annotation( "cjm"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (autopod cartilage) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An autopod endochondral element that is composed primarily of cartilage tissue.") AnnotationAssertion( ) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0015064") AnnotationAssertion(rdfs:label "autopod cartilage") SubClassOf( ) SubClassOf( ) # Class: (centrale endochondral element) AnnotationAssertion(Annotation( "PHENOSCAPE:AMAO") "Endochondral element located between the proximal and distal rows of carpals or tarsals and thus representing the central carpals or tarsals[PHENOSCAPE].") AnnotationAssertion( "This term corresponds both to the navicular bone in the pes and the similar central carpals in the manus") AnnotationAssertion(Annotation( "FMA"^^xsd:string) "the FMA term is under 'general anatomical term'.") AnnotationAssertion(Annotation( "UBERON:0012131") "central mesopodium element") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "UBERON:0012131") Annotation( ) "centralia") AnnotationAssertion( "UBERON:0015067") AnnotationAssertion(rdfs:label "centrale endochondral element") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (distal carpal endochondral element) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A distal mesopodial endochondral element that is part of a forelimb.") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "AAO:0000847") "distal carpal") AnnotationAssertion(Annotation( "UBERON:cjm"^^xsd:string) Annotation( ) "distal carpal") AnnotationAssertion( "UBERON:0015068") AnnotationAssertion(rdfs:label "distal carpal endochondral element") SubClassOf( ) SubClassOf( ) # Class: (distal carpal cartilage element) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A distal carpal endochondral element that is composed primarily of cartilage tissue.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0015069") AnnotationAssertion(rdfs:label "distal carpal cartilage element") SubClassOf( ) SubClassOf( ) SubClassOf( ) # Class: (centrale cartilage) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A centrale endochondral element that is composed primarily of cartilage tissue.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0015077") AnnotationAssertion(rdfs:label "centrale cartilage") SubClassOf( ) SubClassOf( ) # Class: (proximal carpal endochondral element) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A proximal mesopodial endochondral element that is part of a forelimb.") AnnotationAssertion(Annotation( "UBERON:cjm"^^xsd:string) "proximal carpal element") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "UBERON:cjm"^^xsd:string) Annotation( ) "proximal carpal") AnnotationAssertion( "UBERON:0015078") AnnotationAssertion(rdfs:label "proximal carpal endochondral element") SubClassOf( ) SubClassOf( ) # Class: (proximal carpal cartilage) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A proximal carpal endochondral element that is composed primarily of cartilage tissue.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0015079") AnnotationAssertion(rdfs:label "proximal carpal cartilage") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (proximal carpal bone pre-cartilage condensation) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A proximal carpal endochondral element that is composed primarily of a pre-cartilage condensation.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0015080") AnnotationAssertion(rdfs:label "proximal carpal bone pre-cartilage condensation") SubClassOf( ) SubClassOf( ) # Class: (proximal tarsal endochondral element) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A proximal mesopodial endochondral element that is part of a hindlimb.") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "UBERON:cjm"^^xsd:string) Annotation( ) "proximal tarsal") AnnotationAssertion( "UBERON:0015081") AnnotationAssertion(rdfs:label "proximal tarsal endochondral element") SubClassOf( ) SubClassOf( ) # Class: (proximal tarsal cartilage) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A proximal tarsal endochondral element that is composed primarily of cartilage tissue.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0015082") AnnotationAssertion(rdfs:label "proximal tarsal cartilage") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (proximal tarsal bone pre-cartilage condensation) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A proximal tarsal endochondral element that is composed primarily of a pre-cartilage condensation.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0015083") AnnotationAssertion(rdfs:label "proximal tarsal bone pre-cartilage condensation") SubClassOf( ) SubClassOf( ) # Class: (distal carpal bone 1 endochondral element) AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "UBERON:cjm"^^xsd:string) Annotation( ) "distal carpal 1") AnnotationAssertion( "UBERON:0015084") AnnotationAssertion(rdfs:label "distal carpal bone 1 endochondral element") SubClassOf( ) # Class: (distal carpal bone 1 cartilage) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A distal carpal bone 1 endochondral element that is composed primarily of cartilage tissue.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0015085") AnnotationAssertion(rdfs:label "distal carpal bone 1 cartilage") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (distal carpal bone 1 pre-cartilage condensation) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A distal carpal bone 1 endochondral element that is composed primarily of a pre-cartilage condensation.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0015086") AnnotationAssertion(rdfs:label "distal carpal bone 1 pre-cartilage condensation") SubClassOf( ) SubClassOf( ) # Class: (distal carpal bone 2 endochondral element) AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "UBERON:cjm"^^xsd:string) Annotation( ) "distal carpal 2") AnnotationAssertion( "UBERON:0015087") AnnotationAssertion(rdfs:label "distal carpal bone 2 endochondral element") SubClassOf( ) # Class: (distal carpal bone 2 cartilage) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A distal carpal bone 2 endochondral element that is composed primarily of cartilage tissue.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0015088") AnnotationAssertion(rdfs:label "distal carpal bone 2 cartilage") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (distal carpal bone 2 pre-cartilage condensation) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A distal carpal bone 2 endochondral element that is composed primarily of a pre-cartilage condensation.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0015089") AnnotationAssertion(rdfs:label "distal carpal bone 2 pre-cartilage condensation") SubClassOf( ) SubClassOf( ) # Class: (distal carpal bone 3 endochondral element) AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "UBERON:cjm"^^xsd:string) Annotation( ) "distal carpal 3") AnnotationAssertion( "UBERON:0015090") AnnotationAssertion(rdfs:label "distal carpal bone 3 endochondral element") SubClassOf( ) # Class: (distal carpal bone 3 cartilage) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A distal carpal bone 3 endochondral element that is composed primarily of cartilage tissue.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0015091") AnnotationAssertion(rdfs:label "distal carpal bone 3 cartilage") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (distal carpal bone 3 pre-cartilage condensation) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A distal carpal bone 3 endochondral element that is composed primarily of a pre-cartilage condensation.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0015092") AnnotationAssertion(rdfs:label "distal carpal bone 3 pre-cartilage condensation") SubClassOf( ) SubClassOf( ) # Class: (distal carpal bone 4 endochondral element) AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "UBERON:cjm"^^xsd:string) Annotation( ) "distal carpal 4") AnnotationAssertion( "UBERON:0015093") AnnotationAssertion(rdfs:label "distal carpal bone 4 endochondral element") SubClassOf( ) # Class: (distal carpal bone 4 cartilage) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A distal carpal bone 4 endochondral element that is composed primarily of cartilage tissue.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0015094") AnnotationAssertion(rdfs:label "distal carpal bone 4 cartilage") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (distal carpal bone 4 pre-cartilage condensation) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A distal carpal bone 4 endochondral element that is composed primarily of a pre-cartilage condensation.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0015095") AnnotationAssertion(rdfs:label "distal carpal bone 4 pre-cartilage condensation") SubClassOf( ) SubClassOf( ) # Class: (distal carpal bone 5 endochondral element) AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "UBERON:cjm"^^xsd:string) Annotation( ) "distal carpal 5") AnnotationAssertion( "UBERON:0015096") AnnotationAssertion(rdfs:label "distal carpal bone 5 endochondral element") SubClassOf( ) # Class: (distal carpal bone 5 cartilage) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A distal carpal bone 5 endochondral element that is composed primarily of cartilage tissue.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0015097") AnnotationAssertion(rdfs:label "distal carpal bone 5 cartilage") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (distal carpal bone 5 pre-cartilage condensation) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A distal carpal bone 5 endochondral element that is composed primarily of a pre-cartilage condensation.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0015098") AnnotationAssertion(rdfs:label "distal carpal bone 5 pre-cartilage condensation") SubClassOf( ) SubClassOf( ) # Class: (distal tarsal endochondral element) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A distal mesopodial endochondral element that is part of a hindlimb.") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "UBERON:cjm"^^xsd:string) Annotation( ) "distal tarsal") AnnotationAssertion( "UBERON:0015099") AnnotationAssertion(rdfs:label "distal tarsal endochondral element") SubClassOf( ) SubClassOf( ) # Class: (distal tarsal cartilage) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A distal tarsal endochondral element that is composed primarily of cartilage tissue.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0015100") AnnotationAssertion(rdfs:label "distal tarsal cartilage") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (distal tarsal bone pre-cartilage condensation) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A distal tarsal endochondral element that is composed primarily of a pre-cartilage condensation.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0015101") AnnotationAssertion(rdfs:label "distal tarsal bone pre-cartilage condensation") SubClassOf( ) SubClassOf( ) SubClassOf( ) # Class: (distal tarsal bone 1 endochondral element) AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "UBERON:cjm"^^xsd:string) Annotation( ) "distal tarsal 1") AnnotationAssertion( "UBERON:0015102") AnnotationAssertion(rdfs:label "distal tarsal bone 1 endochondral element") SubClassOf( ) # Class: (distal tarsal bone 1 cartilage) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A distal tarsal bone 1 endochondral element that is composed primarily of cartilage tissue.") AnnotationAssertion(Annotation( "UBERON:cjm"^^xsd:string) "distal tarsal 1 cartilage") AnnotationAssertion(Annotation( "UBERON:cjm"^^xsd:string) Annotation( ) "distal tarsal 1 cartilage element") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0015103") AnnotationAssertion(rdfs:label "distal tarsal bone 1 cartilage") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (distal tarsal bone 1 pre-cartilage condensation) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A distal tarsal bone 1 endochondral element that is composed primarily of a pre-cartilage condensation.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0015104") AnnotationAssertion(rdfs:label "distal tarsal bone 1 pre-cartilage condensation") SubClassOf( ) SubClassOf( ) # Class: (distal tarsal bone 2 endochondral element) AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "UBERON:cjm"^^xsd:string) Annotation( ) "distal tarsal 2") AnnotationAssertion( "UBERON:0015105") AnnotationAssertion(rdfs:label "distal tarsal bone 2 endochondral element") SubClassOf( ) # Class: (distal tarsal bone 2 cartilage) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A distal tarsal bone 2 endochondral element that is composed primarily of cartilage tissue.") AnnotationAssertion(Annotation( "UBERON:cjm"^^xsd:string) "distal tarsal 2 cartilage") AnnotationAssertion(Annotation( "UBERON:cjm"^^xsd:string) Annotation( ) "distal tarsal 2 cartilage element") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0015106") AnnotationAssertion(rdfs:label "distal tarsal bone 2 cartilage") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (distal tarsal bone 2 pre-cartilage condensation) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A distal tarsal bone 2 endochondral element that is composed primarily of a pre-cartilage condensation.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0015107") AnnotationAssertion(rdfs:label "distal tarsal bone 2 pre-cartilage condensation") SubClassOf( ) SubClassOf( ) # Class: (distal tarsal bone 3 endochondral element) AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "UBERON:cjm"^^xsd:string) Annotation( ) "distal tarsal 3") AnnotationAssertion( "UBERON:0015108") AnnotationAssertion(rdfs:label "distal tarsal bone 3 endochondral element") SubClassOf( ) # Class: (distal tarsal bone 3 cartilage) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A distal tarsal bone 3 endochondral element that is composed primarily of cartilage tissue.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0015109") AnnotationAssertion(rdfs:label "distal tarsal bone 3 cartilage") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (distal tarsal bone 3 pre-cartilage condensation) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A distal tarsal bone 3 endochondral element that is composed primarily of a pre-cartilage condensation.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0015110") AnnotationAssertion(rdfs:label "distal tarsal bone 3 pre-cartilage condensation") SubClassOf( ) SubClassOf( ) # Class: (distal tarsal bone 4 endochondral element) AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "UBERON:cjm"^^xsd:string) Annotation( ) "distal tarsal 4") AnnotationAssertion( "UBERON:0015111") AnnotationAssertion(rdfs:label "distal tarsal bone 4 endochondral element") SubClassOf( ) # Class: (distal tarsal bone 4 cartilage) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A distal tarsal bone 4 endochondral element that is composed primarily of cartilage tissue.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0015112") AnnotationAssertion(rdfs:label "distal tarsal bone 4 cartilage") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (distal tarsal bone 4 pre-cartilage condensation) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A distal tarsal bone 4 endochondral element that is composed primarily of a pre-cartilage condensation.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0015113") AnnotationAssertion(rdfs:label "distal tarsal bone 4 pre-cartilage condensation") SubClassOf( ) SubClassOf( ) # Class: (distal tarsal bone 5 endochondral element) AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "UBERON:cjm"^^xsd:string) Annotation( ) "distal tarsal 5") AnnotationAssertion( "UBERON:0015114") AnnotationAssertion(rdfs:label "distal tarsal bone 5 endochondral element") SubClassOf( ) # Class: (distal tarsal bone 5 cartilage) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A distal tarsal bone 5 endochondral element that is composed primarily of cartilage tissue.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0015115") AnnotationAssertion(rdfs:label "distal tarsal bone 5 cartilage") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (distal tarsal bone 5 pre-cartilage condensation) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A distal tarsal bone 5 endochondral element that is composed primarily of a pre-cartilage condensation.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0015116") AnnotationAssertion(rdfs:label "distal tarsal bone 5 pre-cartilage condensation") SubClassOf( ) SubClassOf( ) # Class: (lamina terminalis of cerebral hemisphere) AnnotationAssertion(Annotation( ) "The remnant of the lamina terminalis in the developed brain.") AnnotationAssertion(Annotation( "FMA:61975") "lamina terminalis") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "DHBA:12105") AnnotationAssertion( "EHDAA:3500") AnnotationAssertion( "EHDAA:4498") AnnotationAssertion( "FMA:61975") AnnotationAssertion( "VHOG:0001547") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0015117") AnnotationAssertion(rdfs:comment "In the developed brain, the lamina terminalis remains as the thin rostral wall of the third ventricle, stretching from the bases of the major cerebral commissures (the anterior commissure, the commissure of the fornix, and the rostrum of the corpus callosum) to the dorsal surface of the optic chiasm[MGI:anna]") AnnotationAssertion(rdfs:label "lamina terminalis of cerebral hemisphere") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete neocortical column) AnnotationAssertion(Annotation( ) "A group of neurons in the cortex of the brain which can be successively penetrated by a probe inserted perpendicularly to the cortical surface, and which have nearly identical receptive fields.") AnnotationAssertion( "Wikipedia:Cortical_column") AnnotationAssertion(Annotation( ) "cortical column") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0015118") AnnotationAssertion(rdfs:label "obsolete neocortical column") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (right outer canthus) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An outer canthus that is in_the_right_side_of a head.") AnnotationAssertion( "https://github.com/obophenotype/uberon/wiki/Modeling-paired-structures-Design-Pattern"^^xsd:anyURI) AnnotationAssertion( "FMA:59317") AnnotationAssertion( "right angle of eye") AnnotationAssertion(Annotation( "FMA:59317") "right lateral palpebral commissure") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:59317") "lateral angle of right eye") AnnotationAssertion(Annotation( "FMA:59317") "lateral canthus of right eye") AnnotationAssertion(Annotation( "FMA:59317") "right lateral canthus") AnnotationAssertion( "UBERON:0015120") AnnotationAssertion(rdfs:label "right outer canthus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (left outer canthus) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An outer canthus that is in_the_left_side_of a head.") AnnotationAssertion( "https://github.com/obophenotype/uberon/wiki/Modeling-paired-structures-Design-Pattern"^^xsd:anyURI) AnnotationAssertion( "FMA:59318") AnnotationAssertion( "left angle of eye") AnnotationAssertion(Annotation( "FMA:59318") "left lateral palpebral commissure") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:59318") "lateral angle of left eye") AnnotationAssertion(Annotation( "FMA:59318") "lateral canthus of left eye") AnnotationAssertion(Annotation( "FMA:59318") "left lateral canthus") AnnotationAssertion( "UBERON:0015121") AnnotationAssertion(rdfs:label "left outer canthus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (anatomical line between outer canthi) AnnotationAssertion(Annotation( ) "An anatomical line of the face that connects the two outer (lateral) canthi of the eye. The length of this line is known as the outer canthal distance.") AnnotationAssertion( "inter lateral canthal line") AnnotationAssertion( "inter outer canthal line") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0015122") AnnotationAssertion(rdfs:label "anatomical line between outer canthi") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (anterior internodal tract) AnnotationAssertion(Annotation( "FMA:9480") "Internodal tract which consists of the atrial and atrial septal branches.") AnnotationAssertion( "FMA:9480") AnnotationAssertion(Annotation( "FMA:9480") "anterior internodal fasciculus") AnnotationAssertion(Annotation( "FMA:9480") "anterior internodal tract muscle tissue") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0015125") AnnotationAssertion(rdfs:label "anterior internodal tract") SubClassOf(Annotation( "FMA"^^xsd:string) ) DisjointClasses(Annotation( "lexical"^^xsd:string) ) # Class: (middle internodal tract) AnnotationAssertion( "FMA:9482") AnnotationAssertion(Annotation( "FMA:9482") "internodal tract of Wenckebach") AnnotationAssertion(Annotation( "FMA:9482") "middle internodal fasciculus") AnnotationAssertion(Annotation( "FMA:9482") "middle internodal tract muscle tissue") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0015126") AnnotationAssertion(rdfs:label "middle internodal tract") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (posterior internodal tract) AnnotationAssertion( "FMA:9483") AnnotationAssertion(Annotation( "FMA:9483") "internodal tract of Thorel") AnnotationAssertion(Annotation( "FMA:9483") "posterior internodal fasciculus") AnnotationAssertion(Annotation( "FMA:9483") "posterior internodal tract muscle tissue") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0015127") AnnotationAssertion(rdfs:label "posterior internodal tract") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (subepicardial layer of epicardium) AnnotationAssertion( "consider merging into myocardial compact layer") AnnotationAssertion( "FMA:83105") AnnotationAssertion(Annotation( "FMA:83105") "perimysial connective tissue of subepicardium") AnnotationAssertion(Annotation( "FMA:83105") "subepicardial connective tissue") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0015128") AnnotationAssertion(rdfs:label "subepicardial layer of epicardium") SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (epicardial fat) AnnotationAssertion(Annotation( ) "Visceral intrapericardial fat contiguous with the myocardial surface.") AnnotationAssertion( ) AnnotationAssertion( "FMA:9871") AnnotationAssertion( "epicardial adipose tissue") AnnotationAssertion( "pericardial adipose tissue") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0015129") AnnotationAssertion(rdfs:label "epicardial fat") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (connective tissue of prostate gland) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A portion of connective tissue that is part of a prostate gland.") AnnotationAssertion( "FMA:74165") AnnotationAssertion(Annotation( "FMA:74165") "connective tissue of prostate") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0015130") AnnotationAssertion(rdfs:label "connective tissue of prostate gland") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (subepithelial connective tissue of prostatic gland) AnnotationAssertion( "FMA:74189") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0015131") AnnotationAssertion(rdfs:label "subepithelial connective tissue of prostatic gland") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (extralobar lactiferous duct) AnnotationAssertion( "FMA:58069") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0015132") AnnotationAssertion(rdfs:label "extralobar lactiferous duct") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (terminal lactiferous duct) AnnotationAssertion( "FMA:58260") AnnotationAssertion(Annotation( "FMA:58260") "branch of lactiferous duct proper") AnnotationAssertion(Annotation( "FMA:58260") "lobular lactiferous duct") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0015133") AnnotationAssertion(rdfs:label "terminal lactiferous duct") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (main lactiferous duct) AnnotationAssertion( "FMA:62102") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0015134") AnnotationAssertion(rdfs:label "main lactiferous duct") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (primary lactiferous duct) AnnotationAssertion( "FMA:74428") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0015135") AnnotationAssertion(rdfs:label "primary lactiferous duct") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (secondary lactiferous duct) AnnotationAssertion( "FMA:74430") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0015136") AnnotationAssertion(rdfs:label "secondary lactiferous duct") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (tertiary lactiferous duct) AnnotationAssertion( "FMA:74431") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0015137") AnnotationAssertion(rdfs:label "tertiary lactiferous duct") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (quarternary lactiferous duct) AnnotationAssertion( "FMA:74432") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0015138") AnnotationAssertion(rdfs:label "quarternary lactiferous duct") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (infundibulum of gallbladder) AnnotationAssertion(Annotation( "MP:0009465") "The tapering portion of the gall bladder that narrows to form the neck and cystic duct.") AnnotationAssertion( "FMA:76652") AnnotationAssertion(Annotation( "FMA:76652") "gallbladder infundibulum") AnnotationAssertion(Annotation( "MP:0009465") Annotation( ) "infundibulum vesicae biliaris") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0015139") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "infundibulum of gallbladder") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (falciform fat) AnnotationAssertion(Annotation( "MURDOCH:768") "A large fat pad that is located at the base of the abdominal wall, in the falciform ligament of the liver.") AnnotationAssertion( "uberon") AnnotationAssertion( "falciform fat depot") AnnotationAssertion( "falciform ligament fat pad") AnnotationAssertion( "UBERON:0015142") AnnotationAssertion(rdfs:label "falciform fat") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (mesenteric fat pad) AnnotationAssertion(Annotation( "MP:0008903") "Encapsulated adipose tissue associated with the mesentery.") AnnotationAssertion(Annotation( "MP:0008903") "mesenteric fat depot") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0015143") AnnotationAssertion(rdfs:label "mesenteric fat pad") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (autopod hair) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A strand of hair that is part of a autopod region.") AnnotationAssertion( "hair of hand/foot") AnnotationAssertion( "hand/foot hair") AnnotationAssertion( "paw hair") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0015144") AnnotationAssertion(rdfs:label "autopod hair") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pes hair) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A strand of hair that is part of a pes.") AnnotationAssertion( "foot hair") AnnotationAssertion( "hair of foot") AnnotationAssertion( "hind foot hair") AnnotationAssertion( "hind paw hair") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0015145") AnnotationAssertion(rdfs:label "pes hair") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (manus hair) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A strand of hair that is part of a manus.") AnnotationAssertion( "hair of hand") AnnotationAssertion( "hand hair") AnnotationAssertion( "front paw hair") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0015146") AnnotationAssertion(rdfs:label "manus hair") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pinna hair) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A strand of hair that is part of a pinna.") AnnotationAssertion( "uberon") AnnotationAssertion( "ear hair") AnnotationAssertion( "UBERON:0015147") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "pinna hair") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (ventral hair) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A strand of hair that is part of a ventrum.") AnnotationAssertion( "uberon") AnnotationAssertion( "ventral coat hair") AnnotationAssertion( "UBERON:0015149") AnnotationAssertion(rdfs:label "ventral hair") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (dorsal hair) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A strand of hair that is part of a dorsum.") AnnotationAssertion( "FMA:54320") AnnotationAssertion( "uberon") AnnotationAssertion( "back hair") AnnotationAssertion( "dorsal coat hair") AnnotationAssertion(Annotation( "FMA:54320") "hair of back") AnnotationAssertion( "UBERON:0015150") AnnotationAssertion(rdfs:label "dorsal hair") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (gland of ocular region) AnnotationAssertion(Annotation( ) Annotation( ) "A gland that is typically found in or near the orbital region, in or around either the medial or lateral canthi, and is typically associated with secretions onto the eyeball or associated ducts. Includes the Harderian, nictitans and lacrimal glands.") AnnotationAssertion( "the only orbital gland found in anuran amphibians is either the Harderian or the lacrimal; if it is a lacrimal, then a progressive lateral migration of the lacrimal glands must occur through the amniotes[PMID:7559104]") AnnotationAssertion( "the only orbital gland found in anuran amphibians is the Harderian[PMID:8843648]") AnnotationAssertion( ) AnnotationAssertion( "ocular gland") AnnotationAssertion( "uberon") AnnotationAssertion( "orbital gland") AnnotationAssertion( "UBERON:0015152") AnnotationAssertion(rdfs:label "gland of ocular region") SubClassOf( ) SubClassOf(Annotation( "inferred") ObjectSomeValuesFrom( )) # Class: (medial gland of ocular region) AnnotationAssertion(Annotation( ) "A gland that is located in the ocular region, nearer the inner canthi. Typically associated with or part of the nictitating membrane, when present.") AnnotationAssertion( "Rabbits, pigs and Mongolian gerbils have both a Harderian and a nictitans gland[ISBN:1118473523]") AnnotationAssertion( "the distinction between Harderian and nictitans gland is only valid in mammals - the medial ocular glands in other terapods are called Harderian glands regardless of their secretion[DOI:10.1007/978-3-642-76685-5_2]") AnnotationAssertion( "medial ocular gland") AnnotationAssertion( "medial orbital gland") AnnotationAssertion( "Harderian gland") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0015153") AnnotationAssertion(rdfs:label "medial gland of ocular region") SubClassOf( ) DisjointClasses(Annotation( "lexical"^^xsd:string) ) # Class: (lateral gland of orbital region) AnnotationAssertion(Annotation( ) "A gland that is located in or around the ocular region, nearer the outer canthi.") AnnotationAssertion( "The class name or definition should not be taken to mean strictly in the lateral ocular region. We place the extraocular lacrimal glands, even though they are as the name suggests outside the ocular region. The class exists as the division between lateral vs medial (Harderian, nictitans) glands is standard, e.g. http://www.ncbi.nlm.nih.gov/pubmed/7559104") AnnotationAssertion( "lateral ocular gland") AnnotationAssertion( "lateral orbital gland") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0015154") AnnotationAssertion(rdfs:label "lateral gland of orbital region") SubClassOf( ) # Class: (conjunctival space) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An anatomical space that is enclosed by a conjunctiva.") AnnotationAssertion( ) AnnotationAssertion( "FMA:59083") AnnotationAssertion(Annotation( "FMA:59083") "cavity of conjunctival sac") AnnotationAssertion(Annotation( "FMA:59083") "conjunctival sac cavity") AnnotationAssertion( "subconjunctival space") AnnotationAssertion(Annotation( ) Annotation( "NCBITaxon:8570") "subbrillar space") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0015155") AnnotationAssertion(rdfs:label "conjunctival space") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (terminal branch of ophthalmic artery) AnnotationAssertion(Annotation( ) Annotation( ) "The two terminal branches of the ophthalmic artery in humans are the dorsal nasal artery and the supratrochlear artery.") AnnotationAssertion( "FMA:51956") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0015156") AnnotationAssertion(rdfs:label "terminal branch of ophthalmic artery") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (zygomatico-orbital artery) AnnotationAssertion(Annotation( ) "The middle temporal artery occasionally gives off a zygomatico-orbital branch, which runs along the upper border of the zygomatic arch, between the two layers of the temporal fascia, to the lateral angle of the orbit. This branch, which may arise directly from the superficial temporal artery, supplies the Orbicularis oculi, and anastomoses with the lacrimal and palpebral branches of the ophthalmic artery.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:49663") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "zygomaticooerbital branch") AnnotationAssertion(Annotation( ) "zygomaticoorbital branch") AnnotationAssertion( "UBERON:0015157") AnnotationAssertion(rdfs:label "zygomatico-orbital artery") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (supraorbital artery) AnnotationAssertion(Annotation( ) "The supraorbital artery is an artery of the head. It springs from the ophthalmic artery as that vessel is crossing over to the medial side of the optic nerve.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:49973") AnnotationAssertion(Annotation( ) Annotation( ) "arteria supraorbitalis") AnnotationAssertion(Annotation( "FMA:49973") "supra-orbital artery") AnnotationAssertion(Annotation( "FMA:49973") "supraorbital artery") AnnotationAssertion( "uberon") AnnotationAssertion( "supraorbital branch of external ophthalmic artery") AnnotationAssertion( "UBERON:0015160") AnnotationAssertion(rdfs:label "supraorbital artery") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (inferior branch of oculomotor nerve) AnnotationAssertion(Annotation( ) "The inferior branch of the oculomotor nerve or the inferior division, the larger, divides into three branches. One passes beneath the optic nerve to the medial rectus. Another, to the inferior rectus. The third and longest runs forward between the inferior recti and lateralis to the inferior oblique. From the last a short thick branch is given off to the lower part of the ciliary ganglion, and forms its short root. All these branches enter the muscles on their ocular surfaces, with the exception of the nerve to the inferior oblique, which enters the muscle at its posterior border.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010632") AnnotationAssertion( "FMA:52573") AnnotationAssertion(Annotation( "FMA:52573") "inferior ramus of oculomotor nerve") AnnotationAssertion(Annotation( "FMA:52573") "oculomotor nerve inferior division") AnnotationAssertion(Annotation( "FMA:52573") "ramus inferior (nervus oculomotorius [III])") AnnotationAssertion(Annotation( ) Annotation( ) "ramus inferior nervi oculomotorii") AnnotationAssertion(Annotation( "FMA:52573") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "ramus inferior nervus oculomotorii") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:52573") "inferior division of oculomotor nerve") AnnotationAssertion(Annotation( "AAO:0010632") "ventral ramus of occulomotor nerve") AnnotationAssertion(Annotation( "AAO:0010632") "ventral ramus of oculomotor nerve") AnnotationAssertion( "UBERON:0015161") AnnotationAssertion(rdfs:label "inferior branch of oculomotor nerve") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "AAO"^^xsd:string) Annotation( "Wikipedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "AAO"^^xsd:string) Annotation( "Wikipedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (superior branch of oculomotor nerve) AnnotationAssertion(Annotation( ) "The superior branch of the oculomotor nerve or the superior division, the smaller, passes medialward over the optic nerve. It supplies the Superior rectus and Levator palpebrae superioris.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010628") AnnotationAssertion( "FMA:52572") AnnotationAssertion(Annotation( "FMA:52572") "oculomotor nerve superior division") AnnotationAssertion(Annotation( "FMA:52572") "ramus superior (nervus oculomotorius [III])") AnnotationAssertion(Annotation( ) Annotation( ) "ramus superior nervi oculomotorii") AnnotationAssertion(Annotation( "FMA:52572") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "ramus superior nervus oculomotorii") AnnotationAssertion(Annotation( "FMA:52572") "superior ramus of oculomotor nerve") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "AAO:0010628") "dorsal ramus of occulomotor nerve") AnnotationAssertion(Annotation( "AAO:0010628") "dorsal ramus of oculomotor nerve") AnnotationAssertion(Annotation( "FMA:52572") "superior division of oculomotor nerve") AnnotationAssertion( "UBERON:0015162") AnnotationAssertion(rdfs:label "superior branch of oculomotor nerve") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (uterine spiral artery) AnnotationAssertion(Annotation( "J:100668") Annotation( "J:117841") Annotation( "MGI:anna"^^xsd:string) Annotation( "MP:0012726") "A corkscrew-like artery in premenstrual or progestational endometrium; uterine spiral arteries play a vital role in supplying nutrients to the placenta and fetus, and are thus remodeled into highly dilated inelastic vessels by the action of invading trophoblast (physiological change).") AnnotationAssertion(Annotation( ) "In women, rats and mice, the endometrial vessels are coiled and known as spiral arteries[PMID:16413937].") AnnotationAssertion(Annotation( "BTO:0003371") "spiral artery") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0003371") AnnotationAssertion( "EMAPA:36612") AnnotationAssertion( "NCIT:C33592") AnnotationAssertion( "endometrial spiral arteriole") AnnotationAssertion(Annotation( "BTO:0003371") "endometrial spiral artery") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "spiral arteries") AnnotationAssertion( "spiral artery") AnnotationAssertion( "UBERON:0015171") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "uterine spiral artery") SubClassOf(Annotation( "BTO"^^xsd:string) ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses( ) # Class: (endometrial blood vessel) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A blood vessel that is part of a endometrium.") AnnotationAssertion( ) AnnotationAssertion( "blood vessel of endometrium") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0015172") AnnotationAssertion(rdfs:label "endometrial blood vessel") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (helicine branch of uterine artery) AnnotationAssertion(Annotation( ) "The helicine branches of uterine artery (or helicine arterioles, or spiral arteries) are small arteries which temporarily supply the endometrium of the uterus during the luteal phase of the menstrual cycle. In histology, identifying the presence of these arteries is one of the most useful techniques in identifying the phase of the cycle.") AnnotationAssertion( ) AnnotationAssertion( "FMA:21101") AnnotationAssertion( "arcuate artery of uterus") AnnotationAssertion(Annotation( "FMA:21101") "helicine artery of uterus") AnnotationAssertion(Annotation( ) Annotation( ) "rami helicini uterinae") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "helicine arteriole") AnnotationAssertion(Annotation( ) Annotation( ) "spiral arteries") AnnotationAssertion(Annotation( ) Annotation( ) "spiral artery") AnnotationAssertion( "UBERON:0015173") AnnotationAssertion(rdfs:comment "Notes: The straight branches of the radial arteries of the uterus terminate in capillaries in the basal layer, while the spiral or coiled branches penetrate to the surface epithelium") AnnotationAssertion(rdfs:label "helicine branch of uterine artery") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (helicine artery of penis) AnnotationAssertion(Annotation( ) "The helicine arteries of penis are arteries in the penis. They are found in the corpora cavernosa penis. They are involved in the process of erection.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:19796") AnnotationAssertion(Annotation( ) Annotation( ) "arteriae helicinae penis") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "helicine arteries") AnnotationAssertion( "UBERON:0015174") AnnotationAssertion(rdfs:label "helicine artery of penis") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (helicine artery) AnnotationAssertion(Annotation( ) "Either the helicine artery of the penis or the helicine artery of the uterus.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "helicine arteries") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0015177") AnnotationAssertion(rdfs:label "helicine artery") SubClassOf( ) SubClassOf( ) # Class: (somite border) AnnotationAssertion(Annotation( ) "A region of somite adjacent to presomitic mesoderm.") AnnotationAssertion( "TAO:0001462") AnnotationAssertion( "XAO:0004074") AnnotationAssertion( "ZFA:0001462") AnnotationAssertion( "uberon") AnnotationAssertion( "inter-somited border") AnnotationAssertion( "intersomitic boundary") AnnotationAssertion( "intersomitic fissure") AnnotationAssertion(Annotation( "XAO:0004074") "intersomitic junction") AnnotationAssertion( "segmental border") AnnotationAssertion(Annotation( "ZFA:0001462") "somite boundary") AnnotationAssertion( "UBERON:0015178") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "somite border") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (somite boundary epithelium) AnnotationAssertion(Annotation( "XAO:0004077") Annotation( "XAO:EJS") "Epithelium located in the intersomitic region.") AnnotationAssertion( "XAO:0004077") AnnotationAssertion(Annotation( "XAO:0004077") "intersomitic epithelium") AnnotationAssertion(Annotation( "XAO:0004077") "intersomitic membrane") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0015179") AnnotationAssertion(rdfs:label "somite boundary epithelium") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (neck of talus) AnnotationAssertion(Annotation( ) "The neck of talus is directed forward and medialward, and comprises the constricted portion of the bone between the body and the oval head. Its upper and medial surfaces are rough, for the attachment of ligaments; its lateral surface is concave and is continuous below with the deep groove for the interosseous talocalcaneal ligament.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:33636") AnnotationAssertion(Annotation( "FMA:33636") "talar neck") AnnotationAssertion(Annotation( "FMA:33636") "talus neck") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "collum tali") AnnotationAssertion( "UBERON:0015180") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "neck of talus") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (neck of tooth) AnnotationAssertion(Annotation( ) "The slightly constricted part of a tooth, between the crown and the root.") AnnotationAssertion( ) AnnotationAssertion( "FMA:55627") AnnotationAssertion( "NCIT:C32346") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) Annotation( ) "cervix dentis") AnnotationAssertion(Annotation( "FMA:55627") "cervix of tooth") AnnotationAssertion(Annotation( "ncithesaurus:Collum_Dentis") Annotation( ) "collumn dentis") AnnotationAssertion(Annotation( ) "dental neck") AnnotationAssertion(Annotation( "FMA:55627") "tooth neck") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "cervical margin of tooth") AnnotationAssertion(Annotation( ) "cervical zone of tooth") AnnotationAssertion( "UBERON:0015181") AnnotationAssertion(rdfs:label "neck of tooth") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (perineural vascular plexus) AnnotationAssertion(Annotation( "MP:0012732") "The capillary bed that initially surrounds the relative avascular brain and spinal cord; the perineural vascular plexus (PNVP) is the precursor to the blood brain barrier formed by angioblasts which migrate away from somites and is recruited to surround the neural tube in response to VEGF; vascularization of the brain and spinal cord occurs via angiogenesis as sprouting vessels from the PNVP invade the neuroepithelium and grow inward toward the ventricular lumen[MP].") AnnotationAssertion( "EMAPA:35678") AnnotationAssertion(Annotation( "MGI:anna"^^xsd:string) Annotation( ) "PNVP") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0015189") AnnotationAssertion(rdfs:label "perineural vascular plexus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (non-connected functional system) AnnotationAssertion(Annotation( "AEO:0000093") Annotation( "AEO:JB"^^xsd:string) Annotation( "FBC:DOS") Annotation( "FBbt:00007278") "An anatomical group whose component structures share a common function.") AnnotationAssertion( "AEO:0000093") AnnotationAssertion( "FBbt:00007278") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0015203") AnnotationAssertion(rdfs:label "non-connected functional system") SubClassOf( ) # Class: (glandular system) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A non-connected functional system that is composed primarily of a gland.") AnnotationAssertion( "EHDAA2:0002223") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0015204") AnnotationAssertion(rdfs:label "glandular system") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lateral structure) AnnotationAssertion(Annotation( ) "Any structure that is placed on one side of the left-right axis of a bilaterian.") AnnotationAssertion( "This class is primarily to implement taxon constraints. It may be removed in the future.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0015212") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "lateral structure") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (arcuate ligament) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A ligament that is part of a diaphragm.") AnnotationAssertion( "EMAPA:19236") AnnotationAssertion( "FMA:58280") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0015214") AnnotationAssertion(rdfs:label "arcuate ligament") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (median arcuate ligament) AnnotationAssertion(Annotation( ) "The median arcuate ligament is a ligament under the diaphragm that connects the right and left crura of diaphragm.") AnnotationAssertion( ) AnnotationAssertion( "FMA:58281") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0015215") AnnotationAssertion(rdfs:label "median arcuate ligament") SubClassOf( ) # Class: (nasal meatus) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:18593") AnnotationAssertion( "FMA:53146") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0015216") AnnotationAssertion(rdfs:label "nasal meatus") SubClassOf( ) SubClassOf(Annotation( "EMAPA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (middle nasal meatus) AnnotationAssertion(Annotation( ) "The middle meatus is a nasal opening or canal situated between the middle and inferior conchae, and extends from the anterior to the posterior end of the latter. The lateral wall of this meatus can be satisfactorily studied only after the removal of the middle concha. On it is a curved fissure, the hiatus semilunaris, limited below by the edge of the uncinate process of the ethmoid and above by an elevation named the bulla ethmoidalis; the middle ethmoidal cells are contained within this bulla and open on or near to it. Through the hiatus semilunaris the meatus communicates with a curved passage termed the infundibulum, which communicates in front with the anterior ethmoidal cells and in rather more than fifty percent of skulls is continued upward as the frontonasal duct into the frontal air-sinus; when this continuity fails, the frontonasal duct opens directly into the anterior part of the meatus. Below the bulla ethmoidalis and hidden by the uncinate process of the ethmoid is the opening of the maxillary sinus (ostium maxillare); an accessory opening is frequently present above the posterior part of the inferior nasal concha.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:19277") AnnotationAssertion( "FMA:53139") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "middle meatus") AnnotationAssertion(Annotation( ) "middle meatus of the nose") AnnotationAssertion( "UBERON:0015219") AnnotationAssertion(rdfs:label "middle nasal meatus") SubClassOf( ) # Class: (inferior nasal meatus) AnnotationAssertion(Annotation( ) "The inferior meatus, the largest of the three meatuses of the nose, is the space between the inferior concha and the floor of the nasal cavity. It extends almost the entire length of the lateral wall of the nose, is broader in front than behind, and presents anteriorly the lower orifice of the nasolacrimal canal.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:19278") AnnotationAssertion( "FMA:53140") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "inferior meatus") AnnotationAssertion( "UBERON:0015220") AnnotationAssertion(rdfs:label "inferior nasal meatus") SubClassOf( ) # Class: (common nasal meatus) AnnotationAssertion( "FMA:53141") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0015221") AnnotationAssertion(rdfs:label "common nasal meatus") SubClassOf( ) # Class: (ventral nasal meatus) AnnotationAssertion(Annotation( "MURDOCH:2178") "The ventral nasal meatus is found between the ventral nasal concha and the dorsal surface of the hard palate.It connects the nasal vestibule with the nasopharynx. Rostrally it is narrow at the nasal vestibule and widens caudally towards the nasopharyngeal meatus. The ventral nasal meatus is the main passage for air. Apart from olfaction, the nasal cavity functions to warm the inhaled air as it passes through the meatuses over the vascular beds of the mucosa. The air is humidified by the vaporization of tears and serous nasal secretion. The air is cleaned throughout the scattered mucous glands. These glands secrete mucous through the nasal cavity and the mucous serves to trap the large particles that come into contact with it. PPP Clinically in the horse the ventral nasal meatus is the main passage through which a stomach tube can be passed to the pharynx and oesophagus and then to the stomach. This kind of a tube is commonly used when drenching a horse for colic, as well as having many other veterinary applications. The tube has to pass through the ventral nasal meatus to the nasopharyngeal meatus and the caudal nares to reach the pharynx and oesophagus. If the tube is accidentally passed into the dorsal or middle nasal meatuses it would pass to the ethmotubinates and cause massive haemorrhage.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0015222") AnnotationAssertion(rdfs:label "ventral nasal meatus") SubClassOf( ) # Class: (dorsal nasal meatus) AnnotationAssertion(Annotation( "MURDOCH:659") "The dosal nasal meatus is a narrow passage bounded dorsally by the roof of the nasal cavity and ventrally by the dorsal concha. It terminates caudally at the junction of the inner plate of the frontal bone with the cribiform plate and lateral mass of the ethmoid bone. It is the shortest and shallowest of the three meatuses.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0015223") AnnotationAssertion(rdfs:label "dorsal nasal meatus") SubClassOf( ) # Class: (interventricular foramen intermedium) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An anatomical conduit that is part of a ventricular septum intermedium.") AnnotationAssertion(Annotation( ) "interventricular ostium intermedium") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0015224") AnnotationAssertion(rdfs:label "interventricular foramen intermedium") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (atrial foramen intermedium) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An anatomical conduit that is part of a atrial septum intermedium.") AnnotationAssertion(Annotation( ) "interatrial ostium intermedium") AnnotationAssertion( "uberon") AnnotationAssertion( "ostium intermedium") AnnotationAssertion( "UBERON:0015225") AnnotationAssertion(rdfs:label "atrial foramen intermedium") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (bulbar spiral septum) AnnotationAssertion( ) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0015226") AnnotationAssertion(rdfs:label "bulbar spiral septum") SubClassOf( ) # Class: (peristaltic circulatory vessel) AnnotationAssertion(Annotation( ) "A vessel down which passes a wave of muscular contraction, that forces the flow of haemolymphatic fluid.") AnnotationAssertion(Annotation( ) ) AnnotationAssertion( "See http://www.ncbi.nlm.nih.gov/pubmed/20235196 for discussion of whether embryonic vertebrate heart is peristaltic") AnnotationAssertion( "ANISEED:1235302") AnnotationAssertion( "BSA:0000063") AnnotationAssertion( "BSA:0000088") AnnotationAssertion(Annotation( ) "peristaltic heart") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0015227") AnnotationAssertion(rdfs:label "peristaltic circulatory vessel") SubClassOf( ) SubClassOf( ) SubClassOf( ) # Class: (circulatory organ) AnnotationAssertion(Annotation( ) "A hollow, muscular organ, which, by contracting rhythmically, contributes to the circulation of lymph, blood or analogs. Examples: a chambered vertebrate heart; the tubular peristaltic heart of ascidians; the dorsal vessel of an insect; the lymoh heart of a reptile.") AnnotationAssertion( "heart") AnnotationAssertion( "SPD:0000130") AnnotationAssertion( "cardiac pump") AnnotationAssertion( "heart or heart like organ") AnnotationAssertion( "circulatory vessel") AnnotationAssertion( "uberon") AnnotationAssertion( "cardiac structure") AnnotationAssertion( "UBERON:0015228") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "circulatory organ") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (accessory circulatory organ) AnnotationAssertion(Annotation( "UBERON:cjm"^^xsd:string) "A circulatory organ that is not responsible for primary circulation.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0015229") AnnotationAssertion(rdfs:label "accessory circulatory organ") SubClassOf( ) # Class: (dorsal vessel heart) AnnotationAssertion( "FBbt:00003154") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "heart") AnnotationAssertion( "UBERON:0015230") AnnotationAssertion(rdfs:label "dorsal vessel heart") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "FBbt") ObjectSomeValuesFrom( )) # Class: (circulatory system dorsal vessel) AnnotationAssertion( "FBbt:00003152") AnnotationAssertion( "dorsal vessel") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FBbt:00003152") "adult dorsal vessel") AnnotationAssertion( "UBERON:0015231") AnnotationAssertion(rdfs:label "circulatory system dorsal vessel") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (nucleus of dorsal thalamus) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A nucleus of brain that is part of a dorsal thalamus.") AnnotationAssertion(Annotation( "Hagfish possess a habenular complex and separate nuclei in the dorsal thalamus") Annotation( "Butler, 1996, p. 303") ) AnnotationAssertion( "dorsal thalamic nucleus") AnnotationAssertion( "nucleus of thalamus proper") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0015233") AnnotationAssertion(rdfs:label "nucleus of dorsal thalamus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (nucleus of ventral thalamus) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A nucleus of brain that is part of a ventral thalamus.") AnnotationAssertion( "ventral thalamic nucleus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0015234") AnnotationAssertion(rdfs:label "nucleus of ventral thalamus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pineal complex) AnnotationAssertion(Annotation( ) "A cluster in the epithalamus that consists of the pineal body and any associated structures, such as the parapineal gland or the parietal organ. The complex is poorly developed in mammals.") AnnotationAssertion( ) AnnotationAssertion( "TAO:0001359") AnnotationAssertion( "ZFA:0001359") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0015238") AnnotationAssertion(rdfs:label "pineal complex") SubClassOf( ) SubClassOf(Annotation( "ZFA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (lower part of vagina) AnnotationAssertion(Annotation( ) "The lower third of the vagina.") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:18999") AnnotationAssertion( "FMA:27975") AnnotationAssertion( "MA:0003243") AnnotationAssertion( "caudal vagina") AnnotationAssertion(Annotation( "FMA:27975") "perineal part of vagina") AnnotationAssertion(Annotation( "MA:0003243") "vagina lower part") AnnotationAssertion( "uberon") AnnotationAssertion( "lower third of vagina") AnnotationAssertion( "lower vagina") AnnotationAssertion(Annotation( "EMAPA:18999") "sinus vagina") AnnotationAssertion(Annotation( "EMAPA:18999") "vaginal bulb") AnnotationAssertion( "UBERON:0015243") AnnotationAssertion(rdfs:label "lower part of vagina") SubClassOf( ) SubClassOf(Annotation( "cjm"^^xsd:string) ) SubClassOf(Annotation( "EMAPA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) # Class: (accessory olfactory bulb granule cell layer) AnnotationAssertion( ) AnnotationAssertion( "DMBA:15961") AnnotationAssertion( "EMAPA:35109") AnnotationAssertion( "MA:0002933") AnnotationAssertion( "MBA:196") AnnotationAssertion(Annotation( "DMBA:AGr") "AOB, granular layer") AnnotationAssertion(Annotation( "ABA:AOBgr") "accessory olfactory bulb, granular layer") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0015244") AnnotationAssertion(rdfs:label "accessory olfactory bulb granule cell layer") SubClassOf( ) SubClassOf(Annotation( "MA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (septal olfactory organ) AnnotationAssertion(Annotation( ) "A spatially segregated cluster of sensory cells in the nasal cavity.") AnnotationAssertion( "EMAPA:35764") AnnotationAssertion( "MA:0001327") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0015245") AnnotationAssertion(rdfs:label "septal olfactory organ") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "NCBIBook:NBK55971") ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "MA") ObjectSomeValuesFrom( )) # Class: (bifurcation of trachea) AnnotationAssertion(Annotation( "MURDOCH:1966") "This is the point at which the trachea splits into two (left and right) principal bronchi. It is located in the region of the fourth to sixth intercostal space, though this varies with species and with respiratory phase. This position closely associates the bifurcation with the heart base. The thickened median crest initiating the bifurcation is called the tracheal carina .") AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37555") AnnotationAssertion( "FMA:7464") AnnotationAssertion( "MA:0003114") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) Annotation( ) "bifurcatio tracheae") AnnotationAssertion(Annotation( "FMA:7464") "tracheal bifurcation") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0015247") AnnotationAssertion(rdfs:label "bifurcation of trachea") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "MA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (digit skin) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A zone of skin that is part of a digit [Automatically generated definition].") AnnotationAssertion( "EMAPA:32615") AnnotationAssertion( "MA:0003011") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0015249") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "digit skin") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (inferior olivary commissure) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37610") AnnotationAssertion( "MA:0003019") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "MA:0003019") "interolivary commissure") AnnotationAssertion( "UBERON:0015250") AnnotationAssertion(rdfs:label "inferior olivary commissure") SubClassOf( ) SubClassOf(Annotation( "MA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "MA-modified"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (modified sebaceous gland) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37680") AnnotationAssertion( "MA:0003043") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0015251") AnnotationAssertion(rdfs:label "modified sebaceous gland") SubClassOf(Annotation( "MA"^^xsd:string) ) # Class: (coat hair follicle) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A hair follicle that is part of a coat of hair.") AnnotationAssertion( "EMAPA:35246") AnnotationAssertion( "MA:0000160") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0015252") AnnotationAssertion(rdfs:label "coat hair follicle") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pancreas left lobe) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A pancreatic lobule that is in_the_left_side_of a exocrine pancreas.") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37711") AnnotationAssertion( "MA:0000722") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0015280") AnnotationAssertion(rdfs:label "pancreas left lobe") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pancreas right lobe) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A pancreatic lobule that is in_the_right_side_of a exocrine pancreas.") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37712") AnnotationAssertion( "MA:0000723") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0015281") AnnotationAssertion(rdfs:label "pancreas right lobe") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (respiratory system basement membrane) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A basement membrane of epithelium that is part of a respiratory system.") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37570") AnnotationAssertion( "MA:0001815") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0015329") AnnotationAssertion(rdfs:label "respiratory system basement membrane") SubClassOf( ) SubClassOf(Annotation( "MA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (saphenous artery) AnnotationAssertion(Annotation( ) "A branch of the descending genicular artery, the last branch (most distal) of the femoral, the saphenous is also variable. It usually lies between the sartorius and the garcilis muscles and supplies their distal ends. The artery accompanies the saphenous nerve. It usually supplies the skin on the medial and proximal part of the leg. The artery may continue to join, in varying degrees, the dorsalis pedis artery and plantaris pedis arteries.") AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37220") AnnotationAssertion( "FMA:22510") AnnotationAssertion( "MA:0002039") AnnotationAssertion(Annotation( "FMA:22510") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "ramus saphenus (arteria descendentis genus)") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0015350") AnnotationAssertion(rdfs:label "saphenous artery") SubClassOf(Annotation( "MA"^^xsd:string) ) # Class: (heart plus pericardium) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37597") AnnotationAssertion( "MA:0002449") AnnotationAssertion(Annotation( "MA:0002449") "heart/pericardium") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0015410") AnnotationAssertion(rdfs:label "heart plus pericardium") SubClassOf(Annotation( "MA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (urethra mesenchymal layer) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A mesenchyme that is part of a urethra.") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37786") AnnotationAssertion( "MA:0002648") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0015418") AnnotationAssertion(rdfs:label "urethra mesenchymal layer") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (ureteral valve) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A valve that is part of a ureter.") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37781") AnnotationAssertion( "MA:0002658") AnnotationAssertion(Annotation( "MA:0002658") "ureteral valve") AnnotationAssertion( "valve or ureter") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0015420") AnnotationAssertion(rdfs:label "ureteral valve") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (hilar portion of hepatic duct) AnnotationAssertion(Annotation( "ncithesaurus:Hilar_Portion_of_the_Hepatic_Duct") "The segment of either hepatic duct located in the hilum of the liver.") AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37599") AnnotationAssertion( "MA:0002665") AnnotationAssertion( "NCIT:C43630") AnnotationAssertion(Annotation( "MA:0002665") "hilar part of hepatic duct") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0015423") AnnotationAssertion(rdfs:label "hilar portion of hepatic duct") SubClassOf(Annotation( "ncithesaurus"^^xsd:string) ) SubClassOf(Annotation( "MA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "located in or on the hilum, but not part of the liver") ObjectSomeValuesFrom( )) # Class: (levator auris longus muscle) AnnotationAssertion(Annotation( ) "Muscle organ located on the dorsal surface of the head innervated by the facial nerve.") AnnotationAssertion( "EMAPA:36627") AnnotationAssertion( "MA:0002758") AnnotationAssertion(Annotation( "MA:0002758") "levator auris longus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "LAL") AnnotationAssertion( "UBERON:0015430") AnnotationAssertion(rdfs:label "levator auris longus muscle") SubClassOf(Annotation( "MA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (accessory olfactory bulb mitral cell layer) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:35111") AnnotationAssertion( "MA:0002766") AnnotationAssertion( "MBA:204") AnnotationAssertion( "NLXANAT:1005002") AnnotationAssertion(Annotation( "ABA:AOBmi") "accessory olfactory bulb, mitral layer") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0015432") AnnotationAssertion(rdfs:label "accessory olfactory bulb mitral cell layer") SubClassOf( ) SubClassOf(Annotation( "MA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (blood vessel external elastic membrane) AnnotationAssertion(Annotation( "ncithesaurus:External_Elastic_Membrane") "A thin layer of fibrous tissue capable of stretching and contracting. It is part of the tunica media of the blood vessels.") AnnotationAssertion(Annotation( "FMA"^^xsd:string) "in FMA this is classified as an acellular membrane, which is inconsistent with our classification as a tissue layer. Requires further investigation") AnnotationAssertion( "EMAPA:36302") AnnotationAssertion( "FMA:68206") AnnotationAssertion( "MA:0002862") AnnotationAssertion( "NCIT:C32555") AnnotationAssertion(Annotation( "FMA:68206") "external elastic lamina") AnnotationAssertion(Annotation( "MA:0002862") "external elastic membrane") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:68206") "outer elastic lamina") AnnotationAssertion( "UBERON:0015433") AnnotationAssertion(rdfs:label "blood vessel external elastic membrane") SubClassOf(Annotation( "MA"^^xsd:string) ) SubClassOf(Annotation( "MA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (anterior lingual gland duct) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A duct that is part of a anterior lingual gland.") AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37641") AnnotationAssertion( "MA:0002938") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0015445") AnnotationAssertion(rdfs:label "anterior lingual gland duct") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (subcutaneous lymph node) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A lymph node that is part of a hypodermis.") AnnotationAssertion( "MA:0003028") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0015453") AnnotationAssertion(rdfs:label "subcutaneous lymph node") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pancreatic fat pad) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A fat pad that is part of a pancreas.") AnnotationAssertion( "MA:0003029") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0015454") AnnotationAssertion(rdfs:label "pancreatic fat pad") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (accessory hepatic vein) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37065") AnnotationAssertion( "MA:0003035") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0015455") AnnotationAssertion(rdfs:label "accessory hepatic vein") SubClassOf(Annotation( "MA"^^xsd:string) ) # Class: (mediastinal fat pad) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A fat pad that is part of a mediastinum.") AnnotationAssertion( "MA:0003063") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0015458") AnnotationAssertion(rdfs:label "mediastinal fat pad") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (splenic lymph node) AnnotationAssertion(Annotation( ) "The splenic lymph nodes (or pancreaticolienal) accompany the lienal (splenic) artery, and are situated in relation to the posterior surface and upper border of the pancreas; one or two members of this group are found in the gastrolienal ligament. Their afferents are derived from the stomach, spleen, and pancreas, their efferents join the celiac group of preaortic glands.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:66187") AnnotationAssertion( "MA:0003074") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:66187") "jPS 10 node") AnnotationAssertion(Annotation( "FMA:66187") "jPS no. 10 node") AnnotationAssertion(Annotation( "FMA:66187") "lymph node of splenic hilum") AnnotationAssertion(Annotation( "FMA:66187") "no. 10 pancreaticosplenic lymph node") AnnotationAssertion(Annotation( ) "pancreaticolienal lymph node") AnnotationAssertion(Annotation( ) "splenic glands") AnnotationAssertion( "UBERON:0015469") AnnotationAssertion(rdfs:label "splenic lymph node") SubClassOf(Annotation( "MA"^^xsd:string) ) # Class: (tracheobronchial lymph node) AnnotationAssertion(Annotation( "ncithesaurus:Tracheobronchial_Lymph_Node") "A lymph node located near the bifurcation of the trachea.") AnnotationAssertion(Annotation( ) Annotation( "NCBITaxon:10090") "Single (unpaired) lymph node at the tracheal bifurcation.") AnnotationAssertion( "UBERON:0016381") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:5950") AnnotationAssertion( "MA:0003068") AnnotationAssertion( "NCIT:C77651") AnnotationAssertion(Annotation( "FMA:5950") "nodus tracheobronchiale lymphaticus") AnnotationAssertion(Annotation( ) "tracheobronchal lymph node") AnnotationAssertion(Annotation( ) "tracheobronchal node") AnnotationAssertion(Annotation( "FMA:5950") "tracheobronchial node") AnnotationAssertion(Annotation( "MA:0003078") "bronchial lymph node") AnnotationAssertion( "uberon") AnnotationAssertion( "lymph node, tracheobronchial") AnnotationAssertion( "UBERON:0015472") AnnotationAssertion(rdfs:label "tracheobronchial lymph node") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (axilla skin) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A zone of skin that is part of a axilla.") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37349") AnnotationAssertion( "FMA:37322") AnnotationAssertion( "MA:0003087") AnnotationAssertion( "NCIT:C116164") AnnotationAssertion(Annotation( "FMA:37322") "axillary skin") AnnotationAssertion(Annotation( "FMA:37322") "skin of axilla") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0015474") AnnotationAssertion(rdfs:label "axilla skin") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (nose skin) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A zone of skin that is part of a external nose.") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37684") AnnotationAssertion( "FMA:24763") AnnotationAssertion( "MA:0003090") AnnotationAssertion(Annotation( "FMA:24763") "external nasal skin") AnnotationAssertion(Annotation( "FMA:24763") "skin of external nose") AnnotationAssertion(Annotation( "FMA:24763") "skin of nose") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0015476") AnnotationAssertion(rdfs:label "nose skin") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (axillary fat pad) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A fat pad that is part of a axilla.") AnnotationAssertion( "MA:0003091") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0015477") AnnotationAssertion(rdfs:label "axillary fat pad") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (scrotum skin) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A zone of skin that is part of a scrotum.") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:36411") AnnotationAssertion( "FMA:20432") AnnotationAssertion( "MA:0003093") AnnotationAssertion( "scrotal skin") AnnotationAssertion(Annotation( "FMA:20432") "skin of scrotum") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0015479") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "scrotum skin") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (proper hepatic artery) AnnotationAssertion(Annotation( ) "The hepatic artery proper (also proper hepatic artery), arises from the common hepatic artery and runs alongside the portal vein and the common bile duct to form the portal triad. The hepatic artery proper gives off a small supraduodenal artery to the duodenal bulb. Then the right gastric artery comes off and runs to the left along the lesser curvature of the stomach to meet the left gastric artery, which is a branch of the celiac trunk. It subsequently gives off the cystic artery, which feeds the gallbladder, before bifurcating into the right and left hepatic arteries. Of note, the right and left hepatic arteries may demonstrate variant anatomy. A replaced right hepatic artery may arise from the superior mesenteric artery (SMA) and a replaced left hepatic artery may arise from the left gastric artery.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37217") AnnotationAssertion( "FMA:14772") AnnotationAssertion( "MA:0003095") AnnotationAssertion(Annotation( "FMA:14772") "hepatic artery proper") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "proper hepatic") AnnotationAssertion( "UBERON:0015480") AnnotationAssertion(rdfs:label "proper hepatic artery") SubClassOf(Annotation( "MA"^^xsd:string) ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (left hepatic artery) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A hepatic artery that is part of a left lobe of liver.") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37096") AnnotationAssertion( "FMA:14779") AnnotationAssertion( "MA:0003096") AnnotationAssertion(Annotation( "FMA:14779") "left branch of hepatic artery") AnnotationAssertion(Annotation( "FMA:14779") "left part of hepatic artery proper") AnnotationAssertion(Annotation( "FMA:14779") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "ramus sinister (arteria hepatica propria)") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0015481") AnnotationAssertion(rdfs:label "left hepatic artery") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (right hepatic artery) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A hepatic artery that is part of a right lobe of liver.") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37376") AnnotationAssertion( "FMA:14778") AnnotationAssertion( "MA:0003097") AnnotationAssertion(Annotation( "FMA:14778") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "ramus dexter (arteria hepatica propria)") AnnotationAssertion(Annotation( "FMA:14778") "right branch of hepatic artery proper") AnnotationAssertion(Annotation( "FMA:14778") "right part of hepatic artery proper") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0015482") AnnotationAssertion(rdfs:label "right hepatic artery") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (epidermis of metapodial pad) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A zone of skin that is part of a metapodial pad.") AnnotationAssertion(Annotation( "MA"^^xsd:string) "MA distinguishes between foot pad and foot pad skin, but its not clear how these differ if foot pads are skin. See https://github.com/obophenotype/uberon/issues/1305") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37355") AnnotationAssertion( "MA:0003105") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "MA:0003105") "foot pad skin") AnnotationAssertion( "UBERON:0015484") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "epidermis of metapodial pad") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (choledocho-duodenal junction) AnnotationAssertion(Annotation( ) "Hat part of the duodenal wall traversed by the ductus choledochus, ductus pancreaticus, and ampulla.") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37478") AnnotationAssertion( "MA:0003108") AnnotationAssertion(Annotation( "MA:0003108") "choledochoduodenal junction") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0015485") AnnotationAssertion(rdfs:label "choledocho-duodenal junction") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (sural nerve) AnnotationAssertion(Annotation( ) "The sural nerve (short saphenous nerve), formed by the junction of the medial sural cutaneous with the peroneal anastomotic branch of the lateral sural cutaneous nerve, passes downward near the lateral margin of the tendo calcaneus, lying close to the small saphenous vein, to the interval between the lateral malleolus and the calcaneus. It runs forward below the lateral malleolus, and is continued as the lateral dorsal cutaneous nerve along the lateral side of the foot and little toe (via a dorsal digital nerve), communicating on the dorsum of the foot with the intermediate dorsal cutaneous nerve, a branch of the superficial peroneal. In the leg, its branches communicate with those of the posterior femoral cutaneous.") AnnotationAssertion( "sural") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37757") AnnotationAssertion( "FMA:44688") AnnotationAssertion( "MA:0003111") AnnotationAssertion( "NCIT:C77675") AnnotationAssertion( "uberon") AnnotationAssertion( "nerve, sural") AnnotationAssertion( "short saphenal nerve") AnnotationAssertion( "UBERON:0015488") AnnotationAssertion(rdfs:label "sural nerve") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (body of corpus callosum) AnnotationAssertion(Annotation( "ncithesaurus:Body_of_the_Corpus_Callosum") "An area within the corpus callosum, a white matter structure within the cleft that separates the left and right cerebral hemispheres in the mammalian brain, between the genu (anterior region) and the splenium (posterior region).") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "DHBA:10564") AnnotationAssertion( "FMA:61947") AnnotationAssertion( "HBA:9224") AnnotationAssertion( "NCIT:C32216") AnnotationAssertion( "NeuroNamesCNID:177") AnnotationAssertion(Annotation( "FMA:61947") "corpus callosum body") AnnotationAssertion(Annotation( "FMA:61947") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "truncus corporis callosi") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:195") "body of corpus callosum") AnnotationAssertion(Annotation( "NeuroNames:195") "body of the corpus callosum") AnnotationAssertion(Annotation( "NeuroNames:195") Annotation( ) "corpus callosum truncus") AnnotationAssertion(Annotation( "NeuroNames:195") "corpus callosum, body") AnnotationAssertion(Annotation( "NeuroNames:195") Annotation( ) "corpus callosum, corpus") AnnotationAssertion(Annotation( "NeuroNames:195") Annotation( ) "trunculus corporis callosi") AnnotationAssertion(Annotation( "NeuroNames:195") Annotation( ) "truncus corpus callosi") AnnotationAssertion(Annotation( "NeuroNames:195") "trunk of corpus callosum") AnnotationAssertion( "UBERON:0015510") AnnotationAssertion(rdfs:label "body of corpus callosum") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (frontal gyrus) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A gyrus that is part of a frontal cortex.") AnnotationAssertion( ) AnnotationAssertion( "NCIT:C32636") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0015593") AnnotationAssertion(rdfs:label "frontal gyrus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (genu of corpus callosum) AnnotationAssertion(Annotation( "NLX:144462") "Part of corpus callosum comprising the 'kneelike' anterior bend (adapted from Nolte, The Human Brain, 6th ed., 2009 pg 664).") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "DHBA:10563") AnnotationAssertion( "FMA:61946") AnnotationAssertion( "HBA:9223") AnnotationAssertion( "MBA:1108") AnnotationAssertion( "NCIT:C32675") AnnotationAssertion( "NLX:144462") AnnotationAssertion( "NeuroNamesCNID:176") AnnotationAssertion(Annotation( "FMA:61946") "corpus callosum genu") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:194") "corpus callosum, genu") AnnotationAssertion(Annotation( "NeuroNames:194") Annotation( ) "corpus callosum, genu") AnnotationAssertion(Annotation( "NeuroNames:194") "genu") AnnotationAssertion(Annotation( "NeuroNames:194") Annotation( ) "genu corporis callosi") AnnotationAssertion(Annotation( "NeuroNames:194") Annotation( ) "genu corpus callosi") AnnotationAssertion(Annotation( "NeuroNames:194") "genu of corpus callosum") AnnotationAssertion(Annotation( "NeuroNames:194") "genu of the corpus callosum") AnnotationAssertion(Annotation( "NeuroNames:194") "rostrum of corpus callosum (Mai)") AnnotationAssertion( "UBERON:0015599") AnnotationAssertion(rdfs:label "genu of corpus callosum") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (rostrum of corpus callosum) AnnotationAssertion(Annotation( ) "The part of the corpus callosum that projects posteriorly and inferiorly from the anteriormost genu.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "DHBA:10562") AnnotationAssertion( "FMA:61945") AnnotationAssertion( "HBA:9226") AnnotationAssertion( "MBA:979") AnnotationAssertion( "NCIT:C33496") AnnotationAssertion( "NeuroNamesCNID:175") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:193") Annotation( ) "corpus callosum rostrum") AnnotationAssertion(Annotation( "NeuroNames:193") "corpus callosum, rostrum") AnnotationAssertion(Annotation( "NeuroNames:193") "rostrum") AnnotationAssertion(Annotation( "NeuroNames:193") Annotation( ) "rostrum corporis callosi") AnnotationAssertion(Annotation( "NeuroNames:193") Annotation( ) "rostrum corpus callosi") AnnotationAssertion(Annotation( "NeuroNames:193") "rostrum of corpus callosum") AnnotationAssertion(Annotation( ) "rostrum of the corpus callosum") AnnotationAssertion(Annotation( "NeuroNames:193") "rostrum of the corpus callosum") AnnotationAssertion( "UBERON:0015703") AnnotationAssertion(rdfs:label "rostrum of corpus callosum") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (sagittal sinus) AnnotationAssertion(Annotation( ) "Either the inferior or superior sagittal sinus.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "NCIT:C12513") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0015704") AnnotationAssertion(rdfs:label "sagittal sinus") SubClassOf(Annotation( "FMA-abduced") ) # Class: (splenium of the corpus callosum) AnnotationAssertion(Annotation( ) "The posterior end of the corpus callosum. It overlaps the tela chorioidea of the third ventricle and the mid-brain, and ends in a thick, convex, free border.") AnnotationAssertion(Annotation( "NeuroNames:196") "splenium") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "DHBA:10565") AnnotationAssertion( "FMA:61948") AnnotationAssertion( "HBA:9225") AnnotationAssertion( "MBA:986") AnnotationAssertion( "NCIT:C33610") AnnotationAssertion( "NeuroNamesCNID:178") AnnotationAssertion(Annotation( "FMA:61948") "corpus callosum splenium") AnnotationAssertion(Annotation( "FMA:61948") "corpus callosum, splenium") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:196") Annotation( ) "corpus callosum splenium") AnnotationAssertion(Annotation( "NeuroNames:196") Annotation( ) "corpus callosum, splenium") AnnotationAssertion(Annotation( "NeuroNames:196") "corpus callosum, splenium (Burdach)") AnnotationAssertion(Annotation( "NeuroNames:196") Annotation( ) "splenium corporis callosi") AnnotationAssertion(Annotation( "NeuroNames:196") Annotation( ) "splenium corpus callosi") AnnotationAssertion(Annotation( "NeuroNames:196") "splenium of corpus callosum") AnnotationAssertion(Annotation( "NeuroNames:196") "splenium of the corpus callosum") AnnotationAssertion( "UBERON:0015708") AnnotationAssertion(rdfs:label "splenium of the corpus callosum") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (anal canal epithelium) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An epithelium that is part of a anal canal.") AnnotationAssertion( "EMAPA:18835") AnnotationAssertion( "FMA:17511") AnnotationAssertion(Annotation( "FMA:17511") "anal canal epithelium") AnnotationAssertion(Annotation( "FMA:17511") "epithelium of anal canal") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0015716") AnnotationAssertion(rdfs:label "anal canal epithelium") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (smooth muscle tissue layer of ejaculatory duct) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A smooth muscle tissue that is part of a ejaculatory duct.") AnnotationAssertion( "EMAPA:32289") AnnotationAssertion( "FMA:19372") AnnotationAssertion(Annotation( "FMA:19372") "muscle layer of ejaculatory duct") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0015717") AnnotationAssertion(rdfs:label "smooth muscle tissue layer of ejaculatory duct") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (inferior tarsal muscle) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A smooth muscle tissue that is part of a inferior eyelid tarsus.") AnnotationAssertion( ) AnnotationAssertion( "FMA:49059") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0015751") AnnotationAssertion(rdfs:label "inferior tarsal muscle") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (heterogeneous tissue) AnnotationAssertion( "FMA:62798") AnnotationAssertion(Annotation( "FMA:62798") "portion of heterogeneous tissue") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0015757") AnnotationAssertion(rdfs:label "heterogeneous tissue") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (mixed stratified cuboidal and columnar epithelium) AnnotationAssertion(Annotation( "FMA:63913") "Multilaminar epithelium, which consists of more than one layer of cuboidal and columnar cells, only one layer of which is in contact with a basement membrane. Examples: epithelium of wall of pancreatic duct, epithelium of wall of duct of salivary gland.") AnnotationAssertion( "FMA:63913") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0015760") AnnotationAssertion(rdfs:label "mixed stratified cuboidal and columnar epithelium") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (dense regular elastic tissue) AnnotationAssertion(Annotation( "FMA:64782") "Regular connective tissue, which consists of fibroblasts and of intercellular matrix, which contains elastic fiber bundles oriented predominantly in definable directions.") AnnotationAssertion( "FMA:64782") AnnotationAssertion(Annotation( "FMA:64782") "dense elastic connective tissue") AnnotationAssertion(Annotation( "FMA:64782") "dense regular elastic connective tissue") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0015764") AnnotationAssertion(rdfs:label "dense regular elastic tissue") SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (epithelium of duct of salivary gland) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An epithelium that is part of a duct of salivary gland.") AnnotationAssertion( "FMA:67682") AnnotationAssertion(Annotation( "FMA:67682") "epithelium of salivary duct") AnnotationAssertion(Annotation( "FMA:67682") "salivary duct epithelium") AnnotationAssertion(Annotation( "FMA:67682") "salivary ductal epithelium") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0015766") AnnotationAssertion(rdfs:label "epithelium of duct of salivary gland") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (transitional epithelium of prostatic urethra) AnnotationAssertion( "FMA:74267") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0015777") AnnotationAssertion(rdfs:label "transitional epithelium of prostatic urethra") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (smooth muscle layer in fatty layer of subcutaneous tissue) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A smooth muscle tissue that is part of a hypodermis.") AnnotationAssertion( "FMA:77862") AnnotationAssertion(Annotation( "FMA:77862") "muscle layer in fatty layer of subcutaneous tissue") AnnotationAssertion(Annotation( "FMA:77862") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "stratum musculosum panniculi adiposi telae subcutaneae") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0015783") AnnotationAssertion(rdfs:label "smooth muscle layer in fatty layer of subcutaneous tissue") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (duct of olfactory gland) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A duct that is part of a olfactory gland.") AnnotationAssertion( "olfactory gland duct") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0015784") AnnotationAssertion(rdfs:label "duct of olfactory gland") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (acinus of olfactory gland) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An acinus that is part of a olfactory gland.") AnnotationAssertion( "acinar part of olfactory gland") AnnotationAssertion( "olfactory gland acinus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0015785") AnnotationAssertion(rdfs:label "acinus of olfactory gland") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (respiratory segment of nasal mucosa) AnnotationAssertion(Annotation( ) "The portion of the nasal mucosa that is part of the respiratory system.") AnnotationAssertion(Annotation( ) "lined with ciliated pseudostratified columnar epithelium (respiratory epithelium). The respiratory segment has a very vascularized lamina propria allowing the venous plexuses of the conchal mucosa to engorge with blood, restricting airflow and causing air to be directed to the other side of the nose.") AnnotationAssertion( "FMA:77198") AnnotationAssertion(Annotation( "FMA:77198") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "pars respiratoria tunicae mucosae nasi") AnnotationAssertion(Annotation( "FMA:77198") "respiratory zone of nasal mucosa") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0015786") AnnotationAssertion(rdfs:label "respiratory segment of nasal mucosa") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (upper respiratory conduit) AnnotationAssertion(Annotation( ) "Any anatomical conduit which is part of the upper respiratory tract.") AnnotationAssertion(Annotation( "FMA:265132") "Anatomical cluster which consists a segment of the upper respiratory tract[FMA:265132].") AnnotationAssertion( "FMA:265132") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:265132") "respiratory conduit") AnnotationAssertion( "UBERON:0015787") AnnotationAssertion(rdfs:label "upper respiratory conduit") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (olfactory apparatus chamber) AnnotationAssertion(Annotation( ) "An anatomical chamber that is part of the olfactory apparatus, consisting of cavity walls (nasal epithelium and mucosal layers) and the space bounded anteriorly by the nares and posteriorly by the choanae, when these structures are present.") AnnotationAssertion( "FMA:265136") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0015788") AnnotationAssertion(rdfs:label "olfactory apparatus chamber") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (cranial or facial muscle) AnnotationAssertion( "see also, 'facial nerve muscle', which is not precisely equivalent. We include this grouping to accomodate the MA class, which includes masticatory muscle as a subtype; note the masticatory muscle is noy innervated by the facial nerve, unlike the facial muscles proper") AnnotationAssertion( "EMAPA:25133") AnnotationAssertion( "MA:0000579") AnnotationAssertion(Annotation( "MA:0000579") "cranial/facial muscle") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "EMAPA:25133") "cranial-facial muscle") AnnotationAssertion(Annotation( "EMAPA:25133") "cranio-facial muscle") AnnotationAssertion(Annotation( "EMAPA:25133") "craniofacial muscle") AnnotationAssertion( "UBERON:0015789") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "cranial or facial muscle") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (autopod skin) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A zone of skin that is part of a autopod region.") AnnotationAssertion( "EMAPA:32723") AnnotationAssertion( "MA:0003120") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "MA:0003120") "paw skin") AnnotationAssertion( "UBERON:0015790") AnnotationAssertion(rdfs:label "autopod skin") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (digit connective tissue) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A portion of connective tissue that is part of a digit.") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37290") AnnotationAssertion( "MA:0003123") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0015791") AnnotationAssertion(rdfs:label "digit connective tissue") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (induseum griseum) AnnotationAssertion(Annotation( "NLX:49940") "Thin layer of cortex lying on the dorsal surface of the corpus callosum. It has been debated whether it is more related to the hippocampus or the olfactory bulb (Shipley et al., Olfactory System In Paxinos The Rat Nervous System, 2nd ed).") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "DHBA:10304") AnnotationAssertion( "DMBA:16147") AnnotationAssertion( "EMAPA:35430") AnnotationAssertion( "FMA:62488") AnnotationAssertion( "HBA:265504424") AnnotationAssertion( "MA:0003129") AnnotationAssertion( "MBA:19") AnnotationAssertion( "NLX:49940") AnnotationAssertion(Annotation( "HBA:265504424") "indusium griseum") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:173") "gray stria of Lancisi") AnnotationAssertion(Annotation( ) "gyrus epicallosus") AnnotationAssertion(Annotation( ) "gyrus indusium griseum") AnnotationAssertion(Annotation( ) "supracallosal gyrus") AnnotationAssertion( "UBERON:0015793") AnnotationAssertion(rdfs:label "induseum griseum") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "MA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (left lung lobar bronchus epithelium) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An epithelium that is part of a lobar bronchus of left lung.") AnnotationAssertion( "EMAPA:17658") AnnotationAssertion( "MA:0003135") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0015794") AnnotationAssertion(rdfs:label "left lung lobar bronchus epithelium") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (right lung lobar bronchus epitheium) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An epithelium that is part of a lobar bronchus of right lung.") AnnotationAssertion( "EMAPA:17666") AnnotationAssertion( "MA:0003136") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0015795") AnnotationAssertion(rdfs:label "right lung lobar bronchus epitheium") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (liver blood vessel) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A blood vessel that is part of a liver.") AnnotationAssertion( "EMAPA:35498") AnnotationAssertion( "MA:0003137") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "EMAPA:35498") "hepatic blood vessel") AnnotationAssertion( "UBERON:0015796") AnnotationAssertion(rdfs:label "liver blood vessel") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (taenia tectum of brain) AnnotationAssertion(Annotation( ) "A continuation ventrally of the supracallosal gyrus beyond the rostrum of the corpus callosum. It is demonstrated histologically by Nissl stain. In the human ( Anthoney-1994 ) and the macaque ( Paxinos-2004 ) it lies on the rostral surface of the lamina terminalis and is considered identical to or part of the paraterminal gyrus. In the rat ( Swanson-1998 ) and the mouse ( Paxinos-2001 ) it is located similarly in relation to the supracallosal gyrus, however, it is a more prominent layered structure that extends rostrally on the medial surface overlying the anterior olfactory nucleus. It is considered part of the olfactory areas (rodent) of the cerebral cortex. In rodents it consists of two parts, the dorsal tenia tecta and the ventral tenia tecta. Note that some authors use the term 'tenia tecta' or 'taenia tecta' as a synonym for the lateral longitudinal stria ( Riley-1943 ).") AnnotationAssertion( ) AnnotationAssertion( "BTO:0003738") AnnotationAssertion( "DHBA:10305") AnnotationAssertion( "DMBA:16154") AnnotationAssertion( "EMAPA:35847") AnnotationAssertion( "MA:0003150") AnnotationAssertion( "MBA:589") AnnotationAssertion( "NLX:144479") AnnotationAssertion(Annotation( "MA:0003150") "taenia tecta") AnnotationAssertion(Annotation( "DHBA:10305") "taenia tectum") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:1870") Annotation( ) "taenia tecta") AnnotationAssertion(Annotation( "NeuroNames:1870") "tenia tecta") AnnotationAssertion(Annotation( "NeuroNames:1870") "tenia tectum") AnnotationAssertion( "UBERON:0015800") AnnotationAssertion(rdfs:label "taenia tectum of brain") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (ear epithelium) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An epithelium that is part of a ear.") AnnotationAssertion( "EMAPA:32800") AnnotationAssertion( "MA:0003161") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0015807") AnnotationAssertion(rdfs:label "ear epithelium") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (eye epithelium) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An epithelium that is part of a camera-type eye.") AnnotationAssertion( "EMAPA:35957") AnnotationAssertion( "MA:0003162") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0015808") AnnotationAssertion(rdfs:label "eye epithelium") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (middle ear epithelium) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An epithelium that is part of a middle ear.") AnnotationAssertion( "EMAPA:35673") AnnotationAssertion( "MA:0003169") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0015813") AnnotationAssertion(rdfs:label "middle ear epithelium") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (outer ear epithelium) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An epithelium that is part of a external ear.") AnnotationAssertion( "EMAPA:35956") AnnotationAssertion( "MA:0003170") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0015814") AnnotationAssertion(rdfs:label "outer ear epithelium") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete brainstem reticular formation) AnnotationAssertion( "UBERON:0002275") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0015827") AnnotationAssertion(rdfs:label "obsolete brainstem reticular formation") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (cerebellum ventricular layer) AnnotationAssertion( "TODO - disambiguate between developing and adult structure") AnnotationAssertion( "EHDAA2:0001153") AnnotationAssertion( "EMAPA:17790") AnnotationAssertion( "MA:0003187") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0015828") AnnotationAssertion(rdfs:label "cerebellum ventricular layer") SubClassOf(Annotation( "MA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (forebrain ventricular layer) AnnotationAssertion( "EMAPA:32921") AnnotationAssertion( "MA:0003190") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0015829") AnnotationAssertion(rdfs:label "forebrain ventricular layer") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (foregut epithelium) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An epithelium that is part of a foregut.") AnnotationAssertion( "EMAPA:32922") AnnotationAssertion( "MA:0003204") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0015833") AnnotationAssertion(rdfs:label "foregut epithelium") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (duodenum lamina propria) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A lamina propria that is part of a duodenum.") AnnotationAssertion( "EMAPA:27255") AnnotationAssertion( "FMA:15972") AnnotationAssertion( "MA:0003209") AnnotationAssertion(Annotation( "FMA:15972") "duodenal lamina propria") AnnotationAssertion(Annotation( "FMA:15972") "lamina propria mucosae of duodenum") AnnotationAssertion(Annotation( "FMA:15972") "lamina propria of duodenum") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0015834") AnnotationAssertion(rdfs:label "duodenum lamina propria") SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (incisor dental pulp) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A dental pulp that is part of a incisor tooth.") AnnotationAssertion(Annotation( "FMA"^^xsd:string) "FMA has classes for very specific sublcasses but no generic grouping at this level") AnnotationAssertion( "EMAPA:35429") AnnotationAssertion( "FMA:294459") AnnotationAssertion( "MA:0003221") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0015837") AnnotationAssertion(rdfs:label "incisor dental pulp") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (molar dental pulp) AnnotationAssertion(Annotation( "FMA"^^xsd:string) "FMA has classes for very specific sublcasses but no generic grouping at this level") AnnotationAssertion( "EMAPA:35576") AnnotationAssertion( "FMA:294469") AnnotationAssertion( "MA:0003222") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0015838") AnnotationAssertion(rdfs:label "molar dental pulp") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (molar epithelium) AnnotationAssertion( "EMAPA:32878") AnnotationAssertion( "MA:0003224") AnnotationAssertion( "epithelium of molar") AnnotationAssertion( "epithelium of molar tooth") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0015839") AnnotationAssertion(rdfs:label "molar epithelium") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (incisor dental lamina) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A dental lamina that is part of a incisor tooth.") AnnotationAssertion( "EMAPA:32896") AnnotationAssertion( "MA:0003225") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0015840") AnnotationAssertion(rdfs:label "incisor dental lamina") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (molar dental lamina) AnnotationAssertion( "EMAPA:32879") AnnotationAssertion( "MA:0003226") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0015841") AnnotationAssertion(rdfs:label "molar dental lamina") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (incisor enamel organ) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A tooth enamel organ that is part of a incisor tooth.") AnnotationAssertion( "EMAPA:32895") AnnotationAssertion( "MA:0003227") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0015842") AnnotationAssertion(rdfs:label "incisor enamel organ") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (molar enamel organ) AnnotationAssertion( "EMAPA:32880") AnnotationAssertion( "MA:0003228") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0015843") AnnotationAssertion(rdfs:label "molar enamel organ") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (molar dental papilla) AnnotationAssertion( "EMAPA:32882") AnnotationAssertion( "MA:0003232") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "molar odontogenic papilla") AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "molar tooth odontogenic papilla") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0015844") AnnotationAssertion(rdfs:label "molar dental papilla") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (incisor mesenchyme) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An odontogenic mesenchyme that is part of a incisor tooth.") AnnotationAssertion( "EMAPA:32894") AnnotationAssertion( "MA:0003229") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0015846") AnnotationAssertion(rdfs:label "incisor mesenchyme") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (upper left incisor tooth) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A upper jaw incisor that is in_the_left_side_of a dentition.") AnnotationAssertion( ) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0015847") AnnotationAssertion(rdfs:label "upper left incisor tooth") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (incisor tusk) AnnotationAssertion(Annotation( ) "An incisor tooth that protrudes beyond the mouth.") AnnotationAssertion( ) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0015848") AnnotationAssertion(rdfs:label "incisor tusk") SubClassOf( ) SubClassOf( ) # Class: (canine tusk) AnnotationAssertion(Annotation( ) "An cuspid tooth that protrudes beyond the mouth.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0015849") AnnotationAssertion(rdfs:label "canine tusk") SubClassOf( ) SubClassOf( ) # Class: (upper left incisor tusk) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0015850") AnnotationAssertion(rdfs:label "upper left incisor tusk") SubClassOf( ) SubClassOf( ) # Class: (upper right incisor tusk) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0015851") AnnotationAssertion(rdfs:label "upper right incisor tusk") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (interpedicular line) AnnotationAssertion(Annotation( ) "An anatomical line that connects two successive vertebral pedicles. The length of this line is known as the interpedicular distance.") AnnotationAssertion( "inter-vertebral-pedicle line") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "HP:0008450") "interpedicular distance") AnnotationAssertion( "UBERON:0015854") AnnotationAssertion(rdfs:label "interpedicular line") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (parotid lymph node) AnnotationAssertion(Annotation( ) "A lymph node found near the parotid gland.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:61216") AnnotationAssertion( "MA:0003088") AnnotationAssertion(Annotation( "FMA:61216") "parotid node") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0015857") AnnotationAssertion(rdfs:label "parotid lymph node") SubClassOf( ) # Class: (hepatic lymph node) AnnotationAssertion(Annotation( "ncithesaurus:Hepatic_Lymph_Node") "Any of the lymph nodes adjacent to the stomach and duodenum.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:12798") AnnotationAssertion( "MA:0003072") AnnotationAssertion( "NCIT:C77640") AnnotationAssertion(Annotation( "FMA:12798") "hepatic node") AnnotationAssertion(Annotation( ) Annotation( ) "lymphoglandulae hepaticae") AnnotationAssertion(Annotation( ) Annotation( ) "lymphoglandulæ hepaticæ") AnnotationAssertion(Annotation( ) Annotation( ) "nodi lymphoidei hepatici") AnnotationAssertion(Annotation( "FMA:12798") "portal lymph node") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0015859") AnnotationAssertion(rdfs:label "hepatic lymph node") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (visceral abdominal lymph node) AnnotationAssertion( "FMA:66178") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0015860") AnnotationAssertion(rdfs:label "visceral abdominal lymph node") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (gastric lymph node) AnnotationAssertion(Annotation( "ncithesaurus:Gastric_Lymph_Node") "A lymph node along the left gastric artery or greater omentum.") AnnotationAssertion(Annotation( ) Annotation( "NCBITaxon:10090") "Single (unpaired) lymph node in the lesser omentum at the minor curvature of the stomach") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:12796") AnnotationAssertion( "MA:0003071") AnnotationAssertion( "NCIT:C92222") AnnotationAssertion(Annotation( "FMA:12796") "gastric node") AnnotationAssertion(Annotation( ) Annotation( ) "nodi lymphoidei gastrici") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0015863") AnnotationAssertion(rdfs:label "gastric lymph node") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (pancreaticosplenic lymph node) AnnotationAssertion(Annotation( ) "Lymph nodes of the pancreatic tail and spleen, receiving afferents from both organs plus the greater curvature of the stomach; they drain to the celiac lymph nodes.") AnnotationAssertion( "Consider obsoleting - this is apparently an obsolete term that regarded the pancreatic and splenic lymph nodes as a single anatomic unit.[http://medical-dictionary.thefreedictionary.com/pancreaticosplenic+lymph+nodes]") AnnotationAssertion( ) AnnotationAssertion( "FMA:12799") AnnotationAssertion(Annotation( "FMA:12799") "pancreaticosplenic node") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "nodi lymphatici panoccidianuperiores") AnnotationAssertion(Annotation( ) "nodi lymphoidei pancreaticolienales") AnnotationAssertion(Annotation( ) "nodi lymphoidei pancreaticosplenales") AnnotationAssertion(Annotation( ) "superior pancreatic lymph nodes") AnnotationAssertion(Annotation( "FMA:12799") "superior pancreatic node") AnnotationAssertion(Annotation( "FMA:12799") "superior pancreaticosplenic lymph node") AnnotationAssertion( "UBERON:0015865") AnnotationAssertion(rdfs:label "pancreaticosplenic lymph node") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (pyloric lymph node) AnnotationAssertion( ) AnnotationAssertion( "FMA:12802") AnnotationAssertion(Annotation( "FMA:12802") "pyloric node") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0015866") AnnotationAssertion(rdfs:label "pyloric lymph node") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (cystic lymph node) AnnotationAssertion( ) AnnotationAssertion( "FMA:12804") AnnotationAssertion(Annotation( "FMA:12804") "cystic node") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0015867") AnnotationAssertion(rdfs:label "cystic lymph node") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (lymph node of epiploic foramen) AnnotationAssertion( "FMA:12805") AnnotationAssertion(Annotation( "FMA:12805") "lymph node of anterior border of epiploic foramen") AnnotationAssertion(Annotation( "FMA:12805") "lymph node of anterior border of omental foramen") AnnotationAssertion(Annotation( "FMA:12805") "node of anterior border of epiploic foramen") AnnotationAssertion(Annotation( "FMA:12805") "node of anterior border of omental foramen") AnnotationAssertion(Annotation( "FMA:12805") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "nodus foraminalis") AnnotationAssertion(Annotation( "FMA:12805") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "nodus lymphoideus foraminalis") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:12805") "epiploic foramen lymph node") AnnotationAssertion( "UBERON:0015868") AnnotationAssertion(rdfs:label "lymph node of epiploic foramen") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (retropharyngeal lymph node) AnnotationAssertion(Annotation( ) "The retropharyngeal lymph nodes, from one to three in number, lie in the buccopharyngeal fascia, behind the upper part of the pharynx and in front of the arch of the atlas, being separated, however, from the latter by the Longus capitis. Their afferents drain the nasal cavities, the nasal part of the pharynx, and the auditory tubes. Their efferents pass to the superior deep cervical glands. They are in the retropharyngeal space.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37724") AnnotationAssertion( "FMA:61237") AnnotationAssertion( "MA:0003070") AnnotationAssertion( "NCIT:C77649") AnnotationAssertion(Annotation( "FMA:61237") "retropharyngeal node") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "retropharyngeal glands") AnnotationAssertion(Annotation( ) "retropharyngeal lymph node") AnnotationAssertion( "UBERON:0015869") AnnotationAssertion(rdfs:label "retropharyngeal lymph node") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (lymph node of head) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A lymph node that is part of a head.") AnnotationAssertion( ) AnnotationAssertion( "FMA:61212") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0015870") AnnotationAssertion(rdfs:label "lymph node of head") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (facial lymph node) AnnotationAssertion(Annotation( ) Annotation( ) "Any of the lymph nodes that are part of a face.") AnnotationAssertion( "In humans, these comprise three groups: (a) infraorbital or maxillary, scattered over the infraorbital region from the groove between the nose and cheek to the zygomatic arch; (b) buccinator, one or more placed on the Buccinator opposite the angle of the mouth; (c) supramandibular, on the outer surface of the mandible, in front of the Masseter and in contact with the external maxillary artery and anterior facial vein.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:61222") AnnotationAssertion(Annotation( "FMA:61222") "buccal lymph node") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0015871") AnnotationAssertion(rdfs:label "facial lymph node") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (mandibular lymph node) AnnotationAssertion(Annotation( ) "The mandibular lymph node is a lymph node found near the jaw.") AnnotationAssertion(Annotation( ) Annotation( "NCBITaxon:10090") "In mice, Rostromedial to the sublingual and mandibular salivary glands.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:61227") AnnotationAssertion( "MA:0003067") AnnotationAssertion(Annotation( "FMA:61227") "mandibular node") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) "nodus mandibularis") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "lymphonodi mandibulares") AnnotationAssertion(Annotation( ) Annotation( ) "nodus lymphoideus mandibularis") AnnotationAssertion( "UBERON:0015872") AnnotationAssertion(rdfs:comment "Editor nodes: consider merging with submandibular, at least for mouse, see http://www.ncbi.nlm.nih.gov/pubmed/16624319") AnnotationAssertion(rdfs:label "mandibular lymph node") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (heel skin) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A zone of skin that is part of a heel.") AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37354") AnnotationAssertion( "MA:0003104") AnnotationAssertion( "skin of heel") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0015873") AnnotationAssertion(rdfs:label "heel skin") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (heel) AnnotationAssertion(Annotation( ) Annotation( ) "The part of the foot that is the projection of the calcaneus.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:24994") AnnotationAssertion( "MESH:D006365") AnnotationAssertion(Annotation( "FMA:24994") "calcaneal region") AnnotationAssertion(Annotation( "FMA:24994") "heel region") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) "regio calcanea") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0015875") AnnotationAssertion(rdfs:label "heel") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pelvic lymph node) AnnotationAssertion(Annotation( "ncithesaurus:Pelvic_Lymph_Node") "Any lymph node within the abdominal pelvic region.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:12800") AnnotationAssertion( "NCIT:C12363") AnnotationAssertion(Annotation( "FMA:12800") "lymph node of pelvis") AnnotationAssertion( "uberon") AnnotationAssertion( "pelvic node") AnnotationAssertion( "UBERON:0015876") AnnotationAssertion(rdfs:label "pelvic lymph node") SubClassOf( ) SubClassOf( ) # Class: (parietal pelvic lymph node) AnnotationAssertion( "FMA:66193") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:66193") "paracervical lymph node") AnnotationAssertion( "UBERON:0015877") AnnotationAssertion(rdfs:label "parietal pelvic lymph node") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (common iliac lymph node) AnnotationAssertion(Annotation( ) "The external iliac lymph nodes, from eight to ten in number, lie along the external iliac vessels. They are arranged in three groups, one on the lateral, another on the medial, and a third on the anterior aspect of the vessels; the third group is, however, sometimes absent. Their principal afferents are derived from the inguinal lymph nodes, the deep lymphatics of the abdominal wall below the umbilicus and of the adductor region of the thigh, and the lymphatics from the glans penis vel clitoridis, the membranous urethra, the prostate, the fundus of the urinary bladder, the cervix uteri, and upper part of the vagina.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:12806") AnnotationAssertion( "MA:0003066") AnnotationAssertion( "NCIT:C32761") AnnotationAssertion(Annotation( "FMA:12806") "common iliac node") AnnotationAssertion(Annotation( "FMA:12806") "iliac lymph node") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "external iliac glands") AnnotationAssertion(Annotation( ) "external iliac lymph gland") AnnotationAssertion(Annotation( ) "iliac lymph node") AnnotationAssertion(Annotation( ) Annotation( ) "noduli iliaci superficiales") AnnotationAssertion( "UBERON:0015878") AnnotationAssertion(rdfs:label "common iliac lymph node") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (external iliac lymph node) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:16646") AnnotationAssertion( "NCIT:C88143") AnnotationAssertion(Annotation( "FMA:16646") "external iliac node") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0015880") AnnotationAssertion(rdfs:label "external iliac lymph node") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (internal iliac lymph node) AnnotationAssertion(Annotation( ) "The internal iliac lymph nodes (or hypogastric) surround the internal iliac artery and its branches (the hypogastric vessels), and receive the lymphatics corresponding to the distribution of the branches of it, i. e. , they receive lymphatics from all the pelvic viscera, from the deeper parts of the perineum, including the membranous and cavernous portions of the urethra, and from the buttock and back of the thigh. It does not receive lymph from the ovary, testis, or superior half of the rectum; the gonads drain to the paraaortic lymph nodes, while the superior half of the rectum drains to the pararectal lymph nodes.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:16654") AnnotationAssertion( "NCIT:C88142") AnnotationAssertion(Annotation( "FMA:16654") "internal iliac node") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0015881") AnnotationAssertion(rdfs:label "internal iliac lymph node") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (gluteal lymph node) AnnotationAssertion( ) AnnotationAssertion( "FMA:16657") AnnotationAssertion(Annotation( "FMA:16657") "gluteal node") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0015883") AnnotationAssertion(rdfs:label "gluteal lymph node") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (presymphysial lymph node) AnnotationAssertion( ) AnnotationAssertion( "FMA:16667") AnnotationAssertion(Annotation( "FMA:16667") "presymphysial node") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0015884") AnnotationAssertion(rdfs:label "presymphysial lymph node") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (cymba conchae of pinna) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:61082") AnnotationAssertion( "NCIT:C32420") AnnotationAssertion(Annotation( "FMA:61082") "cymba conchae of auricle") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0015885") AnnotationAssertion(rdfs:label "cymba conchae of pinna") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (root of nail) AnnotationAssertion(Annotation( ) "The part of the nail plate that extends into the dermis (nail matrix).") AnnotationAssertion( ) AnnotationAssertion( "FMA:60128") AnnotationAssertion( "NCIT:C33495") AnnotationAssertion( "nail groove") AnnotationAssertion(Annotation( "FMA:60128") "nail root") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0015886") AnnotationAssertion(rdfs:label "root of nail") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (proximal deep inguinal lymph node) AnnotationAssertion(Annotation( "BTO:0004550") "One of the deep inguinal lymph nodes located in or adjacent to the femoral canal; sometimes mistaken for a femoral hernia when enlarged.") AnnotationAssertion( "BTO:0004550") AnnotationAssertion( "FMA:44303") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) "nodus inguinales profundi proximalis") AnnotationAssertion(Annotation( "FMA:44303") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "nodus lymphoideus inguinales profundi proximalis") AnnotationAssertion(Annotation( "FMA:44303") "proximal deep inguinal node") AnnotationAssertion(Annotation( "FMA:44303") "proximal inguinal lymph node") AnnotationAssertion(Annotation( "FMA:44303") "rosenmuller's gland") AnnotationAssertion(Annotation( "FMA:44303") "rosenmuller's node") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0004550") "Rosenmueller gland") AnnotationAssertion(Annotation( "BTO:0004550") "Rosenmueller node") AnnotationAssertion(Annotation( "BTO:0004550") "node of Cloquet") AnnotationAssertion(Annotation( "BTO:0004550") "nodus lymphoideus inguinalis profundi proximalis") AnnotationAssertion( "UBERON:0015895") AnnotationAssertion(rdfs:label "proximal deep inguinal lymph node") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (superficial lymph node) AnnotationAssertion(Annotation( ) "A lymph node that is located close to the surface.") AnnotationAssertion( "FMA:12767") AnnotationAssertion( "NCIT:C102716") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0015917") AnnotationAssertion(rdfs:label "superficial lymph node") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (deep lymph node) AnnotationAssertion(Annotation( ) "A lymph node that is located deeper within the organism, further from the surface.") AnnotationAssertion( "FMA:12768") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0015918") AnnotationAssertion(rdfs:label "deep lymph node") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete tonsillar lymph node) AnnotationAssertion(Annotation( ) "The term tonsillar node can be inaccurate or ambiguous.") AnnotationAssertion( "SCTID:261419004") AnnotationAssertion( "tonsillar node") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0015919") AnnotationAssertion(rdfs:label "obsolete tonsillar lymph node") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete genital lymph node) AnnotationAssertion(Annotation( ) "The term tonsillar node can be inaccurate or ambiguous.") AnnotationAssertion( "genital node") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0015920") AnnotationAssertion(rdfs:label "obsolete genital lymph node") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (accessory mandibular lymph node) AnnotationAssertion(Annotation( ) Annotation( "NCBITaxon:10090") "Dorsolateral to the mandibular lymph node.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0015922") AnnotationAssertion(rdfs:label "accessory mandibular lymph node") SubClassOf( ) # Class: (superficial parotid lymph node) AnnotationAssertion(Annotation( ) "A parotid lymph node that is located superficially.") AnnotationAssertion(Annotation( ) Annotation( "NCBITaxon:10090") "Rostromedial to the sublingual and mandibular salivary glands Dorsolateral to the mandibular lymph node Ventral to the external acoustic pore, caudal to the extraorbital lacrimal gland, cranioventral to the parotid salivary gland, dorsal to the junction between the superficial temporal vein (v.) and the maxillary v..") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:61217") AnnotationAssertion(Annotation( "FMA:61217") "superficial parotid node") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0015923") AnnotationAssertion(rdfs:label "superficial parotid lymph node") SubClassOf( ) SubClassOf( ) # Class: (superficial intraparotid lymph node) AnnotationAssertion( ) AnnotationAssertion( "superficial intraparotid node") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0015925") AnnotationAssertion(rdfs:label "superficial intraparotid lymph node") SubClassOf( ) SubClassOf( ) # Class: (cranial deep lymph node) AnnotationAssertion(Annotation( ) Annotation( "NCBITaxon:10090") "Medial to the external jugular vein and sternocephalic muscle (m.), lateral to sternohyoid m., caudal to digastric m., dorsal to the trachea.") AnnotationAssertion( "cranial deep node") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0015926") AnnotationAssertion(rdfs:label "cranial deep lymph node") SubClassOf( ) # Class: (sciatic lymph node) AnnotationAssertion(Annotation( ) "A lymph node that is medial to the gluteus superficialis m., caudal to gluteus medius m. and sciatic nerve lymph node.") AnnotationAssertion(Annotation( ) ) AnnotationAssertion( "MA:0002884") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0016374") AnnotationAssertion(rdfs:label "sciatic lymph node") SubClassOf( ) # Class: (ileocolic lymph node) AnnotationAssertion(Annotation( ) "One of the lymph nodes that form a chain around the ileocolic artery.") AnnotationAssertion( "Can be subclassed based on position relative to terminal branches of the vessel. Consider adding subclasses for these: (a) ileal, in relation to the ileal branch of the artery;(b) anterior ileocolic, usually of three glands, in the ileocolic fold, near the wall of the cecum;(c) posterior ileocolic, mostly placed in the angle between the ileum and the colon, but partly lying behind the cecum at its junction with the ascending colon;(d) a single gland, between the layers of the mesenteriole of the vermiform process;(e) right colic, along the medial side of the ascending colon.") AnnotationAssertion(Annotation( "ncithesaurus:Ileocecocolic_Lymph_Node") "A lymph node at the ileocecocolic junction.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:16611") AnnotationAssertion( "MA:0003065") AnnotationAssertion( "NCIT:C77653") AnnotationAssertion(Annotation( ) Annotation( ) "nodi lymphoidei ileocolici") AnnotationAssertion(Annotation( "MA:0003065") Annotation( "ncithesaurus:Ileocecocolic_Lymph_Node") "ileocecocolic lymph node") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:16611") "ileocolic node") AnnotationAssertion( "UBERON:0016378") AnnotationAssertion(rdfs:label "ileocolic lymph node") SubClassOf(Annotation( "MA"^^xsd:string) ) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (prescapular lymph node) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37723") AnnotationAssertion( "MA:0003069") AnnotationAssertion( "NCIT:C77654") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0016382") AnnotationAssertion(rdfs:label "prescapular lymph node") SubClassOf(Annotation( "MA"^^xsd:string) ) # Class: (paraaortic lymph node) AnnotationAssertion(Annotation( ) "The paraaortic lymph nodes (also known as para-aortic, periaortic, and peri-aortic) are a group of lymph nodes that lie in front of the lumbar vertebral bodies near the aorta. These lymph nodes receive drainage from the lower gastrointestinal tract and the pelvic organs.") AnnotationAssertion( ) AnnotationAssertion( "FMA:16604") AnnotationAssertion( "MA:0003073") AnnotationAssertion( "NCIT:C77643") AnnotationAssertion(Annotation( "FMA:16604") "lateral aortic lymph node") AnnotationAssertion(Annotation( "FMA:16604") "lateral aortic node") AnnotationAssertion(Annotation( "FMA:16604") "para-aortic lymph node") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:16604") "latero-aortic lymph node") AnnotationAssertion(Annotation( "FMA:16604") "lateroaortic lymph node") AnnotationAssertion(Annotation( "FMA:16604") "left lateral aortic lymph node") AnnotationAssertion( "UBERON:0016386") AnnotationAssertion(rdfs:label "paraaortic lymph node") SubClassOf(Annotation( "MA"^^xsd:string) ) # Class: (auricular lymph node) AnnotationAssertion(Annotation( ) ) AnnotationAssertion( "MA:0003092") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0016390") AnnotationAssertion(rdfs:label "auricular lymph node") SubClassOf(Annotation( "MA"^^xsd:string) ) # Class: (thymic lymph node) AnnotationAssertion( "MA:0003118") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0016391") AnnotationAssertion(rdfs:label "thymic lymph node") SubClassOf(Annotation( "MA"^^xsd:string) ) # Class: (mastoid lymph node) AnnotationAssertion(Annotation( ) "The mastoid lymph nodes (retroauricular lymph nodes, posterior auricular glands), usually two in number, are situated on the mastoid insertion of the Sternocleidomastoideus, beneath the Auricularis posterior. Their afferent vessels drain the posterior part of the temporoparietal region, the upper part of the cranial surface of the auricula or pinna, and the back of the external acoustic meatus; their efferents pass to the superior deep cervical glands.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:61215") AnnotationAssertion(Annotation( "FMA:61215") "mastoid node") AnnotationAssertion(Annotation( "UBERON:cjm"^^xsd:string) "postauricular lymph node") AnnotationAssertion(Annotation( "FMA:61215") "retro-auricular lymph node") AnnotationAssertion(Annotation( "FMA:61215") "retro-auricular node") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "mastoid glands") AnnotationAssertion(Annotation( ) "posterior auricular glands") AnnotationAssertion(Annotation( ) "retroauricular lymph nodes") AnnotationAssertion( "UBERON:0016392") AnnotationAssertion(rdfs:label "mastoid lymph node") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (deep parotid lymph node) AnnotationAssertion(Annotation( ) "The deep parotid lymph nodes are lymph nodes found below the parotid gland. The afferents of the subparotid glands drain the nasal part of the pharynx and the posterior parts of the nasal cavities. Their efferents pass to the superior deep cervical glands.") AnnotationAssertion(Annotation( ) ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:61218") AnnotationAssertion(Annotation( "FMA:61218") "deep parotid node") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0016393") AnnotationAssertion(rdfs:label "deep parotid lymph node") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ) # Class: (anterior auricular lymph node) AnnotationAssertion(Annotation( ) "The preauricular deep parotid lymph nodes (anterior auricular glands or preauricular glands), from one to three in number, lie immediately in front of the tragus. Their afferents drain the lateral surface of the auricula and the skin of the adjacent part of the temporal region; their efferents pass to the superior deep cervical glands.") AnnotationAssertion(Annotation( ) ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:61219") AnnotationAssertion( "NCIT:C103429") AnnotationAssertion(Annotation( "FMA:61219") "pre-auricular lymph node") AnnotationAssertion(Annotation( "FMA:61219") "pre-auricular node") AnnotationAssertion( "preauricular lymph node") AnnotationAssertion(Annotation( "FMA:61219") "preauricular node") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "anterior auricular glands") AnnotationAssertion(Annotation( ) "pre-auricular lymph nodes") AnnotationAssertion(Annotation( ) "preauricular glands") AnnotationAssertion( "UBERON:0016394") AnnotationAssertion(rdfs:label "anterior auricular lymph node") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (infra-auricular lymph node) AnnotationAssertion(Annotation( ) "The infra-auricular deep parotid lymph nodes are a group of lymph nodes found underneath the ear.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:61220") AnnotationAssertion( "infra-auricular deep node") AnnotationAssertion( "infra-auricular deep parotid lymph node") AnnotationAssertion( "infra-auricular deep parotid node") AnnotationAssertion(Annotation( "FMA:61220") "infra-auricular node") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0016395") AnnotationAssertion(rdfs:label "infra-auricular lymph node") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (intraglandular lymph node) AnnotationAssertion( "FMA:61221") AnnotationAssertion(Annotation( "FMA:61221") "intraglandular node") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0016396") AnnotationAssertion(rdfs:label "intraglandular lymph node") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (submental lymph node) AnnotationAssertion(Annotation( ) "The submental lymph nodes (or suprahyoid) are situated between the anterior bellies of the Digastrici. Their afferents drain the central portions of the lower lip and floor of the mouth and the apex of the tongue. Their efferents pass partly to the submandibular lymph nodes and partly to a gland of the deep cervical group situated on the internal jugular vein at the level of the cricoid cartilage.") AnnotationAssertion(Annotation( ) ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:61229") AnnotationAssertion(Annotation( "FMA:61229") "level Ia neck node") AnnotationAssertion(Annotation( "FMA:61229") "submental node") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "submental glands") AnnotationAssertion(Annotation( ) "suprahyoid glands") AnnotationAssertion( "UBERON:0016397") AnnotationAssertion(rdfs:label "submental lymph node") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (lymph node of lower limb) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A lymph node that is part of a hindlimb.") AnnotationAssertion( ) AnnotationAssertion( "FMA:44310") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0016398") AnnotationAssertion(rdfs:label "lymph node of lower limb") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lymph node of upper limb) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A lymph node that is part of a forelimb.") AnnotationAssertion( ) AnnotationAssertion( "FMA:44311") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0016399") AnnotationAssertion(rdfs:label "lymph node of upper limb") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (infrapatellar fat pad) AnnotationAssertion(Annotation( ) "The infrapatellar fat pad, also known as Hoffa's fat pad, is a cylindrical piece of fat that is situated under and behind the patella bone within the knee.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:58772") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0016400") AnnotationAssertion(rdfs:label "infrapatellar fat pad") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pancreaticoduodenal lymph node) AnnotationAssertion(Annotation( ) ) AnnotationAssertion(Annotation( ) Annotation( "NCBITaxon:10090") "Single (unpaired) lymph node in the mesoduodenum, dorsal to the portal vein, surrounded by pancreatic tissue") AnnotationAssertion( ) AnnotationAssertion( "FMA:16623") AnnotationAssertion(Annotation( "FMA:16623") "pancreaticoduodenal node") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0016401") AnnotationAssertion(rdfs:label "pancreaticoduodenal lymph node") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (mesocolic lymph node) AnnotationAssertion(Annotation( ) ) AnnotationAssertion(Annotation( ) "Colic lymph node: A mesocolic lymph node that is located along the arteries supplying the colon") AnnotationAssertion(Annotation( ) Annotation( "NCBITaxon:10090") "In the mesocolon at the transition between ascending colon and transverse colon") AnnotationAssertion(Annotation( ) "colic lymph nodes: those mesocolic lymph nodes located along the arteries supplying the colon.") AnnotationAssertion(Annotation( ) "mesocolic lymph nodes: nodes located in the mesocolon; they are of two classes: paracolic lymph nodes, located in immediate proximity to the colon; colic lymph nodes located along the arteries supplying the colon.") AnnotationAssertion( ) AnnotationAssertion( "FMA:300965") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0016402") AnnotationAssertion(rdfs:label "mesocolic lymph node") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (thoracic wall) AnnotationAssertion(Annotation( ) "The thoracic wall (or chest wall) is the boundary of the thoracic cavity. The bony portion is known as the thoracic cage. However, the wall also includes muscle, skin, and fascia.") AnnotationAssertion(Annotation( "FMA:10428") "Subdivision of chest wall which includes the ribcage, muscle group of thoracic wall and costal pleura. Examples: There is only one thoracic wall[FMA:10428].") AnnotationAssertion( ) AnnotationAssertion( "FMA:10428") AnnotationAssertion( "MESH:A01.911.850") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "chest wall") AnnotationAssertion( "UBERON:0016403") AnnotationAssertion(rdfs:label "thoracic wall") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (cervical vertebral arch joint) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A vertebral arch joint that is part of a cervical region of vertebral column.") AnnotationAssertion( "FMA:13668") AnnotationAssertion(Annotation( "FMA:13668") "cervical facet joint") AnnotationAssertion(Annotation( "FMA:13668") "joint of cervical vertebral arch") AnnotationAssertion(Annotation( "FMA:13668") "joint of cervical vertebral articular process") AnnotationAssertion(Annotation( "FMA:13668") "zygapophyseal joint of cervical vertebrae") AnnotationAssertion(Annotation( "FMA:13668") "zygapophysial joint of cervical vertebrae") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0016404") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "cervical vertebral arch joint") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pulmonary capillary) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A capillary that is part of a lung.") AnnotationAssertion( "FMA:14121") AnnotationAssertion(Annotation( "FMA:14121") "capillary of lung") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0016405") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "pulmonary capillary") SubClassOf( ) SubClassOf( ) # Class: (corona of glans penis) AnnotationAssertion(Annotation( ) "The circumference of the base of the glans forms a rounded projecting border, the corona of the glans penis, overhanging a deep retroglandular sulcus, behind which is the neck of the penis.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:19627") AnnotationAssertion( "corona of penis") AnnotationAssertion(Annotation( "FMA:19627") "glans corona") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "corona glandis") AnnotationAssertion( "UBERON:0016408") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "corona of glans penis") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (base of glans penis) AnnotationAssertion( "FMA:19649") AnnotationAssertion(Annotation( "FMA:19649") "glans penile base") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0016409") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "base of glans penis") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (male breast) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A breast that is part of a male organism.") AnnotationAssertion( ) AnnotationAssertion( "FMA:19901") AnnotationAssertion( "NCIT:C33048") AnnotationAssertion(Annotation( "FMA:19901") "mamma masculina") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0016410") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "male breast") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete intergluteal cleft) AnnotationAssertion( "UBERON:0036013") AnnotationAssertion( "UBERON:0036014") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0016411") AnnotationAssertion(rdfs:label "obsolete intergluteal cleft") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (central part of body of bony vertebral centrum) AnnotationAssertion( "FMA:24003") AnnotationAssertion(Annotation( "FMA:24003") "central part of body of vertebra") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0016412") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "central part of body of bony vertebral centrum") SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (medullary cavity of long bone) AnnotationAssertion( "FMA:24023") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:24023") "central medullary cavity of long bone") AnnotationAssertion( "UBERON:0016413") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "medullary cavity of long bone") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (anterior chest) AnnotationAssertion(Annotation( "FMA:24816") "Subdivision of thorax which is anterior to the plane of the posterior boundary of the middle mediastinum.") AnnotationAssertion( ) AnnotationAssertion( "FMA:24816") AnnotationAssertion(Annotation( "FMA:24816") "anterior thoracic region") AnnotationAssertion(Annotation( "FMA:24816") "front of chest") AnnotationAssertion(Annotation( "HP:0007542") "ventral chest") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0016416") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "anterior chest") SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (nasion) AnnotationAssertion(Annotation( ) "The intersection of the frontal and two nasal bones of the human skull. Its manifestation on the visible surface of the face is a distinctly depressed area directly between the eyes, just superior to the bridge of the nose.") AnnotationAssertion( ) AnnotationAssertion( "FMA:264779") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0016418") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "nasion") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (bony part of vertebral arch) AnnotationAssertion( "FMA:29741") AnnotationAssertion(Annotation( "FMA:29741") "bony part of arch of vertebra") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0016419") AnnotationAssertion(rdfs:label "bony part of vertebral arch") SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (compact bone of long bone) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A compact bone tissue that is part of a bone tissue of long bone.") AnnotationAssertion( "FMA:32674") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0016422") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "compact bone of long bone") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (compact bone of diaphysis) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A compact bone tissue that is part of a diaphysis.") AnnotationAssertion( "FMA:32678") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0016423") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "compact bone of diaphysis") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (epiphyseal plate of radius) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An epiphyseal plate that is part of a radius bone.") AnnotationAssertion( "FMA:34354") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0016425") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "epiphyseal plate of radius") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (proximal interphalangeal joint of little finger) AnnotationAssertion( "FMA:35324") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0016426") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "proximal interphalangeal joint of little finger") SubClassOf( ) SubClassOf( ) # Class: (palmar branch of median nerve) AnnotationAssertion(Annotation( ) Annotation( ) "The palmar branch of the median nerve is a branch of the median nerve which arises at the lower part of the forearm and innervates skin of proximal central palm and thenar eminence.") AnnotationAssertion( "does not pass through the carpal tunnel") AnnotationAssertion( ) AnnotationAssertion( "FMA:44836") AnnotationAssertion(Annotation( "FMA:44836") "median nerve palmar branch") AnnotationAssertion(Annotation( "FMA:44836") "palmar branch of anterior interosseous nerve") AnnotationAssertion(Annotation( "FMA:44836") "palmar cutaneous branch of median nerve") AnnotationAssertion(Annotation( "FMA:44836") Annotation( ) "ramus palmaris (nervus medianus)") AnnotationAssertion(Annotation( "FMA:44836") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "ramus palmaris nervus interossei antebrachii anterior") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0016430") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "palmar branch of median nerve") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (chest wall) AnnotationAssertion(Annotation( "FMA:50060") "Subdivision of thorax which includes all structures from the skin to the costal pleura. Examples: There is only one chest wall.") AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37233") AnnotationAssertion( "FMA:50060") AnnotationAssertion( "NCIT:C62484") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0016435") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "chest wall") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (glabella region of bone) AnnotationAssertion(Annotation( ) Annotation( ) "A zone of the frontal bone that connects the supraorbital rirdges.") AnnotationAssertion(Annotation( "FMA:52851") "glabella") AnnotationAssertion( ) AnnotationAssertion( "FMA:52851") AnnotationAssertion( "FMA:57136") AnnotationAssertion(Annotation( "FMA:57136") "glabellar surface of frontal bone") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0016440") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "glabella region of bone") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (median palatine suture) AnnotationAssertion(Annotation( ) "The line of junction between the horizontal parts of the palatine bones that extends from both sides of the skull to form the posterior part of the hard palate.") AnnotationAssertion( "FMA:52966") AnnotationAssertion(Annotation( "FMA:52966") "median palatine suture of skull") AnnotationAssertion(Annotation( "FMA:52966") "middle palatine suture of skull") AnnotationAssertion(Annotation( "FMA:52966") "midpalatal suture of skull") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0016442") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "median palatine suture") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (hair of head) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A strand of hair that is part of a head.") AnnotationAssertion( "FMA:54241") AnnotationAssertion(Annotation( "FMA:54241") "head hair") AnnotationAssertion(Annotation( "FMA:54241") "hair of scalp") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0016446") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "hair of head") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (hair of trunk) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A strand of hair that is part of a trunk.") AnnotationAssertion( "FMA:54250") AnnotationAssertion(Annotation( "FMA:54250") "trunk hair") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0016447") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "hair of trunk") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (upper secondary premolar tooth) AnnotationAssertion( "FMA:55716") AnnotationAssertion(Annotation( "FMA:55716") "maxillary secondary premolar tooth") AnnotationAssertion(Annotation( "FMA:55716") "upper permanent premolar tooth") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:55716") "permanent upper premolar tooth") AnnotationAssertion(Annotation( "FMA:55716") "secondary upper premolar tooth") AnnotationAssertion( "UBERON:0016452") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "upper secondary premolar tooth") SubClassOf( ) SubClassOf( ) SubClassOf( ) # Class: (lower secondary premolar tooth) AnnotationAssertion( "FMA:55717") AnnotationAssertion(Annotation( "FMA:55717") "lower permanent premolar tooth") AnnotationAssertion(Annotation( "FMA:55717") "mandibular secondary premolar tooth") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:55717") "permanent lower premolar tooth") AnnotationAssertion( "UBERON:0016453") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "lower secondary premolar tooth") SubClassOf( ) SubClassOf( ) SubClassOf( ) # Class: (upper central secondary incisor tooth) AnnotationAssertion( "FMA:55722") AnnotationAssertion( "maxillary central permanent incisor tooth") AnnotationAssertion(Annotation( "FMA:55722") "maxillary central secondary incisor tooth") AnnotationAssertion(Annotation( "FMA:55722") "upper central permanent incisor tooth") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:55722") "permanent upper central incisor tooth") AnnotationAssertion( "UBERON:0016454") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "upper central secondary incisor tooth") SubClassOf( ) SubClassOf( ) # Class: (upper lateral secondary incisor tooth) AnnotationAssertion( "FMA:55724") AnnotationAssertion(Annotation( "FMA:55724") "maxillary lateral secondary incisor tooth") AnnotationAssertion(Annotation( "FMA:55724") "upper lateral permanent incisor tooth") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0016455") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "upper lateral secondary incisor tooth") AnnotationAssertion(rdfs:seeAlso "https://github.com/obophenotype/uberon/issues/557"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) # Class: (esophageal hiatus) AnnotationAssertion(Annotation( "HP:0002036") "A hole in the diaphragm through which the esophagus passes.") AnnotationAssertion( "FMA:58289") AnnotationAssertion(Annotation( "FMA:58289") "esophageal hiatus of diaphragm") AnnotationAssertion(Annotation( "FMA:58289") "oesophageal aperture") AnnotationAssertion(Annotation( "FMA:58289") "oesophageal hiatus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0016458") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "esophageal hiatus") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (posterior pole of lens) AnnotationAssertion(Annotation( ) "The central point on the posterior surface of the lens.") AnnotationAssertion( ) AnnotationAssertion( "FMA:58898") AnnotationAssertion( "NCIT:C33375") AnnotationAssertion(Annotation( "FMA:58898") "polus posterior (lens)") AnnotationAssertion(Annotation( ) "polus posterior lentis") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0016459") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "posterior pole of lens") SubClassOf( ) DisjointClasses(Annotation( "lexical"^^xsd:string) ) # Class: (periorbital skin) AnnotationAssertion(Annotation( ) "A zone of skin in the periorbital region of the face.") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37937") AnnotationAssertion( "FMA:59350") AnnotationAssertion(Annotation( "FMA:59350") "skin of orbital part of face") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0016462") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "periorbital skin") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (dorsum of nose) AnnotationAssertion(Annotation( "HP:0011119") "The midline prominence of the nose, extending from the nasal root to the tip.") AnnotationAssertion( ) AnnotationAssertion( "FMA:59517") AnnotationAssertion(Annotation( "FMA:59517") "nasal dorsum") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "HP:0011119") "nasal ridge") AnnotationAssertion( "UBERON:0016464") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "dorsum of nose") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (antihelix) AnnotationAssertion(Annotation( ) "On the pinna, a curved prominence of cartilage, parallel with and in front of the helix, is called the antihelix, also known as the anthelix; this divides above into two crura, the crura antihelicis, between which is a triangular depression, the fossa triangularis.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:60995") AnnotationAssertion( "NCIT:C32120") AnnotationAssertion(Annotation( "FMA:60995") "antihelical part of pinna") AnnotationAssertion(Annotation( "FMA:60995") "antihelix (auricula)") AnnotationAssertion(Annotation( "FMA:60995") "antihelix of pinna") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "anthelix") AnnotationAssertion( "UBERON:0016466") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "antihelix") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (antitragus) AnnotationAssertion(Annotation( ) "The antitragus is a feature of human ear anatomy. It is a small tubercle that points anteriorly. It is separated from the tragus by the intertragic notch.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:61001") AnnotationAssertion( "NCIT:C32121") AnnotationAssertion(Annotation( "FMA:61001") "antitragal part of pinna") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0016467") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "antitragus") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (skin of forehead) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A zone of skin that is part of a forehead.") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37952") AnnotationAssertion( "FMA:63883") AnnotationAssertion(Annotation( "FMA:63883") "forehead skin") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0016475") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "skin of forehead") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (primary incisor tooth) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An incisor tooth that is part of a primary dentition.") AnnotationAssertion( ) AnnotationAssertion( "FMA:84200") AnnotationAssertion(Annotation( "FMA:84200") "deciduous incisor tooth") AnnotationAssertion(Annotation( "FMA:84200") "temporary incisor tooth") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0016476") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "primary incisor tooth") SubClassOf( ) SubClassOf( ) # Class: (zygomatic process of maxilla) AnnotationAssertion(Annotation( ) "The zygomatic process of the maxilla (malar process) is a rough triangular eminence, situated at the angle of separation of the anterior, zygomatic, and orbital surfaces. In front it forms part of the anterior surface. Behind it is concave, and forms part of the infratemporal fossa. Above it is rough and serrated for articulation with the zygomatic bone. Below it presents the prominent arched border which marks the division between the anterior and infratemporal surfaces.") AnnotationAssertion(Annotation( ) "malar process") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:52895") AnnotationAssertion(Annotation( ) "malar process of maxilla") AnnotationAssertion(Annotation( "FMA:52895") "processus zygomaticus (maxilla)") AnnotationAssertion(Annotation( "FMA:52895") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "processus zygomaticus maxillae") AnnotationAssertion(Annotation( "FMA:52895") "zygomaticoorbital process of maxilla") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:52895") "zygomatic appendage of maxilla") AnnotationAssertion( "UBERON:0016477") AnnotationAssertion(rdfs:label "zygomatic process of maxilla") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (liver stroma) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A stroma that is part of a liver.") AnnotationAssertion( "FMA:17553") AnnotationAssertion(Annotation( "FMA:17553") "hepatic stroma") AnnotationAssertion(Annotation( "FMA:17553") "stroma of liver") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0016478") AnnotationAssertion(rdfs:label "liver stroma") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (capsule of liver) AnnotationAssertion(Annotation( ) "A collagenous capsule covering the external surface of the liver.") AnnotationAssertion( "It consists of type III collagen and extends to the stroma of endothelial sinusoids. It is covered by a single layer of mesothelial cells.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:15813") AnnotationAssertion(Annotation( ) Annotation( ) "capsula fibrosa perivascularis") AnnotationAssertion(Annotation( "FMA:15813") "fibrous capsule of liver") AnnotationAssertion(Annotation( "FMA:15813") "glisson's capsule") AnnotationAssertion(Annotation( "FMA:15813") "hepatic capsule") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) "tunica fibrosa (hepar)") AnnotationAssertion(Annotation( "FMA:15813") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "tunica fibrosa hepatis") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "fibrous capsule of Glisson") AnnotationAssertion(Annotation( ) "liver capsule") AnnotationAssertion( "UBERON:0016479") AnnotationAssertion(rdfs:label "capsule of liver") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (interlobular stroma of liver) AnnotationAssertion( "FMA:17525") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0016480") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "interlobular stroma of liver") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (bronchial lymph node) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A lymph node that is part of a bronchus.") AnnotationAssertion( ) AnnotationAssertion( "MA:0003078") AnnotationAssertion( "NCIT:C32232") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0016481") AnnotationAssertion(rdfs:label "bronchial lymph node") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (dental plaque) AnnotationAssertion(Annotation( "BTO:0000338") Annotation( "Dorlands_Medical_Dictionary:MerckSource") "A soft, thin film of food debris, mucin, and dead epithelial cells deposited on the teeth, providing the medium for the growth of various bacteria. The main inorganic components are calcium and phosphorus, with small amounts of magnesium, potassium, and sodium; the organic matrix consists of polysaccharides, proteins, carbohydrates, lipids, and other components. Plaque plays an important etiologic role in the development of dental caries and periodontal and gingival diseases and provides the base for the development of materia alba; calcified plaque forms dental calculus.") AnnotationAssertion( ) AnnotationAssertion( "BTO:0000338") AnnotationAssertion( "MESH:A12.300.300") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0000338") "bacterial plaque") AnnotationAssertion(Annotation( ) "plaque") AnnotationAssertion( "UBERON:0016482") AnnotationAssertion(rdfs:label "dental plaque") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "BTO"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (subgingival dental plaque) AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "subgingival plaque") AnnotationAssertion( "UBERON:0016484") AnnotationAssertion(rdfs:label "subgingival dental plaque") SubClassOf( ) # Class: (supragingival dental plaque) AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "supragingival plaque") AnnotationAssertion( "UBERON:0016485") AnnotationAssertion(rdfs:label "supragingival dental plaque") SubClassOf( ) # Class: (posterior fornix of vagina) AnnotationAssertion(Annotation( ) "The vaginal fornix that is behind the cervix. It is close to the recto-uterine pouch.") AnnotationAssertion( "posterior fornix") AnnotationAssertion( ) AnnotationAssertion( "FMA:19987") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) "pars posterior fornicis vaginae") AnnotationAssertion(Annotation( "FMA:19987") "posterior part of fornix of vagina") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0016486") AnnotationAssertion(rdfs:label "posterior fornix of vagina") SubClassOf(Annotation( "FMA"^^xsd:string) ) DisjointClasses(Annotation( "lexical"^^xsd:string) ) # Class: (anterior fornix of vagina) AnnotationAssertion(Annotation( ) "The vaginal fornix that is front of the cervix. It is close to the vesico-uterine pouch.") AnnotationAssertion( "anterior fornix") AnnotationAssertion( ) AnnotationAssertion( "FMA:19986") AnnotationAssertion(Annotation( "FMA:19986") "anterior part of fornix of vagina") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) Annotation( ) "pars anterior fornicis vaginae") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0016487") AnnotationAssertion(rdfs:label "anterior fornix of vagina") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (auditory system) AnnotationAssertion(Annotation( "NLXANAT:090817") "Is the sensory system for the sense of hearing.") AnnotationAssertion(Annotation( "FMA"^^xsd:string) "Auditory system is general anatomical term in FMA") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:36002") AnnotationAssertion( "FMA:7192") AnnotationAssertion( "MA:0002443") AnnotationAssertion( "NCIT:C12889") AnnotationAssertion( "NLXANAT:090817") AnnotationAssertion( "OpenCyc:Mx4rvViwtJwpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "ncithesaurus:Auditory_System") "UMLS:C0587901") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0016490") AnnotationAssertion(rdfs:label "auditory system") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (vertebral centrum element) AnnotationAssertion(Annotation( ) Annotation( ) Annotation( ) Annotation( "VSAO:0000183") Annotation( "VSAO:curator"^^xsd:string) "Skeletal element that functionally replaces the notochord[VSAP,modified].") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "VSAO:0000183") Annotation( "VSAO"^^xsd:string) Annotation( "VSAO:curator") "Skeletal element that surrounds the notochord.[VSAO]") AnnotationAssertion(Annotation( "MP:0000141,ISBN:0-683-40008-8,PMID:10572046") "the main cylindrical portion of the vertebra ventral to the vertebral canal") AnnotationAssertion( "The vertebral centrum may be cartilaginous, develop as cartilage but be replaced by bone or mineralized, or form directly through intramembranous ossification.") AnnotationAssertion( ) AnnotationAssertion(Annotation( "VSAO:0000183") "centrum") AnnotationAssertion( "VSAO:0000183") AnnotationAssertion( "centrum of vertebra") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0016491") AnnotationAssertion(rdfs:label "vertebral centrum element") SubClassOf(Annotation( "VSAO"^^xsd:string) ) SubClassOf(Annotation( "VSAO"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (foramen spinosum of sphenoid bone) AnnotationAssertion(Annotation( ) "A foramen in the sphenoid bone through which the middle meningeal artery, middle meningeal vein, and the meningeal branch of the mandibular nerve pass.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:53156") AnnotationAssertion(Annotation( ) Annotation( ) "foramen spinosum") AnnotationAssertion(Annotation( "FMA:53156") "foramen spinosum") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0016492") AnnotationAssertion(rdfs:label "foramen spinosum of sphenoid bone") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (palmaris longus muscle) AnnotationAssertion(Annotation( ) "The palmaris longus is seen as a small tendon between the flexor carpi radialis and the flexor carpi ulnaris, although it is not always present. The muscle is absent in about 14 percent of the population, however this varies greatly with ethnicity. Absence of palmaris does not have any known effect on grip strength. Palmaris longus can be palpated by touching the pads of the fifth and first fingers and flexing the wrist. The tendon, if present, will be very visible.") AnnotationAssertion( "palmaris") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "AAO:0010737") AnnotationAssertion( "EMAPA:36205") AnnotationAssertion( "FMA:38462") AnnotationAssertion(Annotation( ) Annotation( ) "musculus palmaris longus") AnnotationAssertion(Annotation( "FMA:38462") "palmaris longus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0016493") AnnotationAssertion(rdfs:label "palmaris longus muscle") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (tendon of palmaris longus) AnnotationAssertion( "FMA:38594") AnnotationAssertion(Annotation( "FMA:38594") "palmaris longus tendon") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:38594") "tendon of palmaris longus muscle") AnnotationAssertion( "UBERON:0016496") AnnotationAssertion(rdfs:label "tendon of palmaris longus") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (epicondyle of humerus) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An epicondyle that is part of a humerus.") AnnotationAssertion( ) AnnotationAssertion( "FMA:321693") AnnotationAssertion( "NCIT:C114187") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0016497") AnnotationAssertion(rdfs:label "epicondyle of humerus") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (intestinal-cloacal junction) AnnotationAssertion(Annotation( "ZFA:0005782") "The juncture where the intestine empties into the cloaca.") AnnotationAssertion( "ZFA:0005782") AnnotationAssertion(Annotation( "ZFA:0005782") "intestinal opening") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "ZFA:0005782") "gut opening") AnnotationAssertion( "UBERON:0016498") AnnotationAssertion(rdfs:label "intestinal-cloacal junction") SubClassOf( ) SubClassOf(Annotation( "ZFA-modified"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (esophageal-pneumatic duct sphincter) AnnotationAssertion(Annotation( "ZFA:0000415") Annotation( "ZFA:CVS") Annotation( "ZFA:YMB") "Sphincter at the junction of the esophagus and pneumatic duct.") AnnotationAssertion( "TAO:0000415") AnnotationAssertion( "ZFA:0000415") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "ZFA:0000415") "oesophagial sphincter") AnnotationAssertion( "UBERON:0016499") AnnotationAssertion(rdfs:label "esophageal-pneumatic duct sphincter") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (muscularis mucosa of fundus of urinary bladder) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A muscularis mucosa that is part of a fundus of urinary bladder.") AnnotationAssertion( "EMAPA:28625") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0016500") AnnotationAssertion(rdfs:label "muscularis mucosa of fundus of urinary bladder") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EMAPA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (muscularis mucosae of fundus of stomach) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A muscularis mucosa that is part of a fundus of stomach.") AnnotationAssertion( "EMAPA:27165") AnnotationAssertion( "FMA:17278") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0016501") AnnotationAssertion(rdfs:label "muscularis mucosae of fundus of stomach") SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (stomach fundus lumen) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An anatomical space that is enclosed by a fundus of stomach.") AnnotationAssertion( "EMAPA:18382") AnnotationAssertion( "FMA:17077") AnnotationAssertion(Annotation( "FMA:17077") "cavity of fundus of stomach") AnnotationAssertion(Annotation( "FMA:17077") "lumen of fundus of stomach") AnnotationAssertion( "lumen of stomach fundus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0016502") AnnotationAssertion(rdfs:label "stomach fundus lumen") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (umbilical ring) AnnotationAssertion(Annotation( ) "A dense fibrous ring surrounding the umbilicus at birth. At about the sixth week of embryological development, the midgut herniates through the umbilical ring; four weeks later it returns to the abdominal cavity and rotates around the superior mesenteric artery.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:31868") AnnotationAssertion( "FMA:19930") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0016504") AnnotationAssertion(rdfs:label "umbilical ring") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf(Annotation( "EMAPA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (Mullerian tubercle) AnnotationAssertion(Annotation( ) "An elevation on the wall of the embryonic urogenital sinus where the Müllerian ducts enter.") AnnotationAssertion( "EMAPA:18328") AnnotationAssertion( "FMA:72175") AnnotationAssertion( "MA:0003239") AnnotationAssertion(Annotation( ) "Muellerian tubercle") AnnotationAssertion(Annotation( ) "Müllerian tubercle") AnnotationAssertion(Annotation( "FMA:72175") "mullerian tubercle") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0016505") AnnotationAssertion(rdfs:label "Mullerian tubercle") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pelvic ganglion) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:31527") AnnotationAssertion( "FMA:80131") AnnotationAssertion(Annotation( "FMA:80131") "inferior hypogastric ganglion") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "pelvic ganglia") AnnotationAssertion( "UBERON:0016508") AnnotationAssertion(rdfs:label "pelvic ganglion") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (cavity of right ventricle) AnnotationAssertion(Annotation( ) "Luminal space of the right ventricle of the heart.") AnnotationAssertion( "EMAPA:26047") AnnotationAssertion( "FMA:9291") AnnotationAssertion(Annotation( "EMAPA:26047") "right ventricle lumen") AnnotationAssertion(Annotation( "FMA:FMA"^^xsd:string) "right ventricular cavity") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0016509") AnnotationAssertion(rdfs:label "cavity of right ventricle") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (epithelium of male urethra) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An epithelium that is part of a male urethra.") AnnotationAssertion( "EMAPA:30467") AnnotationAssertion( "FMA:19684") AnnotationAssertion(Annotation( "FMA:FMA"^^xsd:string) "male urethral epithelium") AnnotationAssertion(Annotation( "EMAPA:30467") "urethral epithelium of male") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0016510") AnnotationAssertion(rdfs:label "epithelium of male urethra") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lamina propria of fundus of stomach) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A lamina propria that is part of a mucosa of fundus of stomach.") AnnotationAssertion( "EMAPA:27163") AnnotationAssertion( "FMA:17500") AnnotationAssertion(Annotation( "FMA:FMA"^^xsd:string) "lamina propria mucosae of fundus of stomach") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0016511") AnnotationAssertion(rdfs:label "lamina propria of fundus of stomach") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lumen of duodenum) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An anatomical space that is part of a duodenum.") AnnotationAssertion( "EMAPA:19080") AnnotationAssertion( "FMA:14589") AnnotationAssertion(Annotation( "FMA:FMA"^^xsd:string) "doudenal lumen") AnnotationAssertion(Annotation( "FMA:FMA"^^xsd:string) "duodenal lumen") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0016512") AnnotationAssertion(rdfs:label "lumen of duodenum") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (cavity of left atrium) AnnotationAssertion(Annotation( ) "Luminal space of the left atrium of the heart.") AnnotationAssertion( "EMAPA:26011") AnnotationAssertion( "FMA:9465") AnnotationAssertion(Annotation( "FMA:FMA"^^xsd:string) "left atrial cavity") AnnotationAssertion(Annotation( "EMAPA:26011") "left atrium lumen") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0016513") AnnotationAssertion(rdfs:label "cavity of left atrium") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (cavity of left ventricle) AnnotationAssertion(Annotation( ) "Luminal space of the left ventricle of the heart.") AnnotationAssertion( "EMAPA:26038") AnnotationAssertion( "FMA:9466") AnnotationAssertion(Annotation( "FMA:FMA"^^xsd:string) "left ventricular cavity") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0016514") AnnotationAssertion(rdfs:label "cavity of left ventricle") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (muscular layer of prostatic urethra) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A muscular coat that is part of a prostatic urethra.") AnnotationAssertion( "EMAPA:30956") AnnotationAssertion( "FMA:19699") AnnotationAssertion(Annotation( "FMA:FMA"^^xsd:string) "muscle layer of prostatic part of urethra") AnnotationAssertion(Annotation( "EMAPA:30956") "muscle layer of prostatic urethra") AnnotationAssertion(Annotation( "FMA:FMA"^^xsd:string) "muscle layer of prostatic urethra") AnnotationAssertion(Annotation( "FMA:FMA"^^xsd:string) "muscular coat of prostatic urethra") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0016515") AnnotationAssertion(rdfs:label "muscular layer of prostatic urethra") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lamina propria of prostatic urethra) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A lamina propria that is part of a prostatic urethra.") AnnotationAssertion( "EMAPA:32303") AnnotationAssertion( "FMA:19693") AnnotationAssertion(Annotation( "FMA:FMA"^^xsd:string) "lamina propria of prostatic part of urethra") AnnotationAssertion(Annotation( "EMAPA:32303") "lamina propria of prostatic urethra") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0016516") AnnotationAssertion(rdfs:label "lamina propria of prostatic urethra") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lumen of jejunum) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An anatomical space that is part of a jejunum.") AnnotationAssertion( "EMAPA:18729") AnnotationAssertion( "FMA:14590") AnnotationAssertion(Annotation( "FMA:FMA"^^xsd:string) "jejunal lumen") AnnotationAssertion(Annotation( "FMA:FMA"^^xsd:string) "jejunum lumen") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0016517") AnnotationAssertion(rdfs:label "lumen of jejunum") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (muscularis mucosae of jejunum) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A muscularis mucosa that is part of a jejunum.") AnnotationAssertion( "EMAPA:27121") AnnotationAssertion( "FMA:15063") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0016519") AnnotationAssertion(rdfs:label "muscularis mucosae of jejunum") SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (epithelium of female urethra) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An epithelium that is part of a female urethra.") AnnotationAssertion( "EMAPA:30470") AnnotationAssertion( "FMA:19774") AnnotationAssertion(Annotation( "FMA:FMA"^^xsd:string) "female urethral epithelium") AnnotationAssertion(Annotation( "EMAPA:30470") "urethral epithelium of female") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0016520") AnnotationAssertion(rdfs:label "epithelium of female urethra") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (cavity of right atrium) AnnotationAssertion(Annotation( ) "Luminal space of the right atrium of the heart.") AnnotationAssertion( "EMAPA:26020") AnnotationAssertion( "FMA:11359") AnnotationAssertion(Annotation( "FMA:FMA"^^xsd:string) "right atrial cavity") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0016522") AnnotationAssertion(rdfs:label "cavity of right atrium") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (muscle layer of spongiose part of urethra) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A muscular coat that is part of a spongiose part of urethra.") AnnotationAssertion( "EMAPA:30950") AnnotationAssertion( "FMA:19701") AnnotationAssertion(Annotation( "EMAPA:30950") "muscle layer of penile urethra") AnnotationAssertion(Annotation( "FMA:FMA"^^xsd:string) "muscle layer of penile urethra") AnnotationAssertion(Annotation( "FMA:FMA"^^xsd:string) "muscle layer of spongy urethra") AnnotationAssertion(Annotation( "FMA:FMA"^^xsd:string) "muscular coat of spongy urethra") AnnotationAssertion(Annotation( "FMA:FMA"^^xsd:string) "muscular layer of spongy urethra") AnnotationAssertion(Annotation( "FMA:19701") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "tunica muscularis urethrae spongiosa") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0016524") AnnotationAssertion(rdfs:label "muscle layer of spongiose part of urethra") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (frontal lobe) AnnotationAssertion(Annotation( "FMA:61824") "Frontal lobe is the anterior-most of five lobes of the cerebral hemisphere. It is bounded by the central sulcus on its posterior border and by the longitudinal cerebral fissure on its medial border.") AnnotationAssertion(Annotation( "MM") "Many species don't have lobes but they do have frontal cortex. Lobe isn't a really well defined term though") AnnotationAssertion(Annotation( "FMA:61824") "frontal region") AnnotationAssertion(Annotation( "FMA:61824") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "regio frontalis") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) Annotation( ) "regio frontalis") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:Frontal_lobe") AnnotationAssertion( "BIRNLEX:928") AnnotationAssertion( "BM:Tel-Cx-FR") AnnotationAssertion( "CALOHA:TS-0389") AnnotationAssertion( "DHBA:12113") AnnotationAssertion( "EFO:0000913") AnnotationAssertion( "EV:0100167") AnnotationAssertion( "FMA:61824") AnnotationAssertion( "HBA:4009") AnnotationAssertion( "MAT:0000505") AnnotationAssertion( "MESH:A08.186.211.730.885.213.270") AnnotationAssertion( "NCIT:C12352") AnnotationAssertion( "OpenCyc:Mx4rv3OJ8JwpEbGdrcN5Y29ycA") AnnotationAssertion(Annotation( "BIRNLEX:928") "UMLS:C0016733") AnnotationAssertion(Annotation( "ncithesaurus:Frontal_Lobe") "UMLS:C0016733") AnnotationAssertion(Annotation( "BIRNLEX:928") "UMLS:C1268977") AnnotationAssertion(Annotation( "BIRNLEX:928") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=56") AnnotationAssertion(Annotation( "NeuroNames:56") Annotation( ) "lobi frontales") AnnotationAssertion(Annotation( ) Annotation( ) "lobus frontalis") AnnotationAssertion(Annotation( "FMA:61824") "frontal cortex") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0016525") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "frontal lobe") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lobe of cerebral hemisphere) AnnotationAssertion(Annotation( "FMA:61823") "Subdivision of telencephalon which is one of a number of subdivisions of each hemisphere separated by both real landmarks (sulci and fissures) and arbitrary boundaries[FMA,modified].") AnnotationAssertion( ) AnnotationAssertion( "UBERON:0000322") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:922") AnnotationAssertion( "BTO:0000445") AnnotationAssertion( "FMA:61823") AnnotationAssertion(Annotation( "FMA:61823") "cerebral hemisphere lobe") AnnotationAssertion(Annotation( "BTO:0000445") "cerebral lobe") AnnotationAssertion(Annotation( "BIRNLEX:922") "lobe of cerebral cortex") AnnotationAssertion(Annotation( "BIRNLEX:922") "lobe parts of cerebral cortex") AnnotationAssertion(Annotation( "FMA:77800") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "lobi cerebri") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:68603") "cerebral cortical segment") AnnotationAssertion(Annotation( "BIRNLEX:922") "lobes of the brain") AnnotationAssertion(Annotation( "FMA:68603") "regional organ part of cerebral cortex") AnnotationAssertion(Annotation( "BIRNLEX:922") "segment of cerebral cortex") AnnotationAssertion( "UBERON:0016526") AnnotationAssertion(rdfs:comment "We use the term lobe broadly as a rough regional area, encompassing homologous regions in smooth-brained mammals. We subdivide the lobes into white matter and neocortical parts.") AnnotationAssertion(rdfs:label "lobe of cerebral hemisphere") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (white matter of cerebral lobe) AnnotationAssertion( "FMA:256176") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0016527") AnnotationAssertion(rdfs:label "white matter of cerebral lobe") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (white matter of frontal lobe) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A white matter of cerebral lobe that is part of a frontal lobe.") AnnotationAssertion( ) AnnotationAssertion( "FMA:256178") AnnotationAssertion( "frontal lobe white matter") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0016528") AnnotationAssertion(rdfs:label "white matter of frontal lobe") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (cortex of cerebral lobe) AnnotationAssertion(Annotation( ) "Grey matter neocortex region of a lobe of the cerebral hemisphere.") AnnotationAssertion( "FMA:242197") AnnotationAssertion(Annotation( "FMA:242197") "cortex of cerebral hemisphere lobe") AnnotationAssertion(Annotation( "FMA:242197") "cortex of lobe of cerebral hemisphere") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:242197") "gray matter of lobe of cerebral hemisphere") AnnotationAssertion( "neocortical part of cerebral hemisphere") AnnotationAssertion( "UBERON:0016529") AnnotationAssertion(rdfs:label "cortex of cerebral lobe") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (parietal cortex) AnnotationAssertion(Annotation( "NLX:79282") "Gray matter of the parietal region of the neocortex, located in the parietal lobe of gyrencephalic animals. It is continuous anteriorly with the frontal cortex, posteriorly with the occipital cortex and medially with the insular cortex and with the temporal cortex on the posterior/inferior border.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "DHBA:10208") AnnotationAssertion( "DMBA:16016") AnnotationAssertion( "EMAPA:35667") AnnotationAssertion( "FMA:242203") AnnotationAssertion( "MA:0000916") AnnotationAssertion( "NLX:79282") AnnotationAssertion(Annotation( "FMA:242203") "cortex of parietal lobe") AnnotationAssertion(Annotation( "FMA:242203") "parietal lobe cortex") AnnotationAssertion(Annotation( "DHBA:10208") "parietal neocortex") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:242203") "gray matter of parietal lobe") AnnotationAssertion( "UBERON:0016530") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "parietal cortex") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (white matter of parietal lobe) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A white matter of cerebral lobe that is part of a parietal lobe.") AnnotationAssertion( ) AnnotationAssertion( "FMA:256184") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0016531") AnnotationAssertion(rdfs:label "white matter of parietal lobe") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (white matter of temporal lobe) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A white matter of cerebral lobe that is part of a temporal lobe.") AnnotationAssertion( ) AnnotationAssertion( "FMA:256186") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0016534") AnnotationAssertion(rdfs:label "white matter of temporal lobe") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (white matter of occipital lobe) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A white matter of cerebral lobe that is part of a occipital lobe.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:256188") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0016535") AnnotationAssertion(rdfs:label "white matter of occipital lobe") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (white matter of limbic lobe) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A white matter of cerebral lobe that is part of a limbic lobe.") AnnotationAssertion( "FMA:261091") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0016536") AnnotationAssertion(rdfs:label "white matter of limbic lobe") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (temporal cortex) AnnotationAssertion(Annotation( "NLX:94939") "Gray matter of the temporal region of the neocortex, located in the temporal lobe in gyrencephalic animals.") AnnotationAssertion( ) AnnotationAssertion( "BM:Tel-Cx-Te") AnnotationAssertion( "DHBA:10235") AnnotationAssertion( "DMBA:16044") AnnotationAssertion( "FMA:242201") AnnotationAssertion( "MA:0000941") AnnotationAssertion( "NLX:94939") AnnotationAssertion(Annotation( "FMA:242201") "cortex of temporal lobe") AnnotationAssertion(Annotation( "FMA:242201") "temporal lobe cortex") AnnotationAssertion(Annotation( "DHBA:10235") "temporal neocortex") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:242201") "gray matter of temporal lobe") AnnotationAssertion( "UBERON:0016538") AnnotationAssertion(rdfs:label "temporal cortex") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (occipital cortex) AnnotationAssertion( "DHBA:10268") AnnotationAssertion( "DMBA:16030") AnnotationAssertion( "EMAPA:35604") AnnotationAssertion( "FMA:242205") AnnotationAssertion( "MA:0000913") AnnotationAssertion( "PBA:4004") AnnotationAssertion(Annotation( "FMA:242205") "cortex of occipital lobe") AnnotationAssertion(Annotation( "FMA:242205") "occipital lobe cortex") AnnotationAssertion(Annotation( "DHBA:10268") "occipital neocortex") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:242205") "gray matter of occipital lobe") AnnotationAssertion( "UBERON:0016540") AnnotationAssertion(rdfs:label "occipital cortex") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (limbic cortex) AnnotationAssertion( "FMA:242234") AnnotationAssertion(Annotation( "FMA:242234") "cortex of limbic lobe") AnnotationAssertion(Annotation( "FMA:242234") "limbic lobe cortex") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:242234") "gray matter of limbic lobe") AnnotationAssertion( "UBERON:0016542") AnnotationAssertion(rdfs:label "limbic cortex") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pharyngeal ectoderm) AnnotationAssertion(Annotation( ) Annotation( ) "The external part of the developing pharynx that is made of ectoderm. During vertebrate development, pockets form in pharyngeal ectoderm between the pharyngeal arches.") AnnotationAssertion( "UBERON:2001379") AnnotationAssertion( "TAO:0001379") AnnotationAssertion( "ZFA:0001379") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0016545") AnnotationAssertion(rdfs:label "pharyngeal ectoderm") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lower foregut region endoderm) AnnotationAssertion( "EHDAA2:0000566") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0016547") AnnotationAssertion(rdfs:label "lower foregut region endoderm") SubClassOf(Annotation( "EHDAA2"^^xsd:string) ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (central nervous system gray matter layer) AnnotationAssertion(Annotation( ) "A layer of of the central nervous system that is part of gray matter.") AnnotationAssertion( "grey matter layer") AnnotationAssertion( "FMA:83142") AnnotationAssertion( "CNS gray matter layer") AnnotationAssertion( "CNS grey matter layer") AnnotationAssertion(Annotation( "FMA:83142") "gray matter layer of neuraxis") AnnotationAssertion( "grey matter layer of neuraxis") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0016548") AnnotationAssertion(rdfs:label "central nervous system gray matter layer") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (central nervous system white matter layer) AnnotationAssertion(Annotation( ) "A layer of of the central nervous system that is composed of white matter.") AnnotationAssertion( "white matter layer") AnnotationAssertion( "FMA:83898") AnnotationAssertion( "CNS white matter layer") AnnotationAssertion(Annotation( "FMA:83898") "white matter layer of neuraxis") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0016549") AnnotationAssertion(rdfs:label "central nervous system white matter layer") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (spinal cord column) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0016550") AnnotationAssertion(rdfs:label "spinal cord column") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (subdivision of spinal cord ventral column) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0016551") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "subdivision of spinal cord ventral column") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (phlegm) AnnotationAssertion(Annotation( ) "Mucus produced in the respiratory tract.") AnnotationAssertion( ) AnnotationAssertion( "NCIT:C93171") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0016552") AnnotationAssertion(rdfs:label "phlegm") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (respiratory system mucus) AnnotationAssertion(Annotation( ) Annotation( ) "Any mucus produced by a mucosae of the respiratory system. This includes the mucus produced in the nasal cavity (nasal mucus) and mucus produced in the respiratory tract (phlegm).") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0016553") AnnotationAssertion(rdfs:label "respiratory system mucus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (white matter of midbrain) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A white matter that is part of the midbrain.") AnnotationAssertion( "DHBA:10650") AnnotationAssertion( "FMA:83936") AnnotationAssertion( "HBA:265505382") AnnotationAssertion(Annotation( "HBA:MESWM") "mesencephalic white matter") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0016554") AnnotationAssertion(rdfs:label "white matter of midbrain") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (stria of telencephalon) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A stria of neuraxis that is part of a telencephalon.") AnnotationAssertion( "FMA:67950") AnnotationAssertion(Annotation( "FMA:67950") "telencephalon stria") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0016555") AnnotationAssertion(rdfs:label "stria of telencephalon") SubClassOf( ) SubClassOf( ) # Class: (superficial cerebral vein) AnnotationAssertion(Annotation( ) "The superficial cerebral veins are a group of veins in the head. This group includes the superior cerebral veins.") AnnotationAssertion( ) AnnotationAssertion( "FMA:50982") AnnotationAssertion(Annotation( "FMA:50982") "cortical cerebral vein") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0016559") AnnotationAssertion(rdfs:label "superficial cerebral vein") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ) # Class: (deep cerebral vein) AnnotationAssertion(Annotation( ) "The deep cerebral veins are a group of veins in the head. This group includes the superior thalamostriate vein.") AnnotationAssertion( ) AnnotationAssertion( "FMA:50989") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0016564") AnnotationAssertion(rdfs:label "deep cerebral vein") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (cerebral blood vessel) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A blood vessel that is part of a cerebellum.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0016565") AnnotationAssertion(rdfs:label "cerebral blood vessel") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pit) AnnotationAssertion(Annotation( "AEO:0000204") Annotation( "AEO:JB"^^xsd:string) "An roughly circular indentation in a surface.") AnnotationAssertion( "AEO:0000204") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0016566") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "pit") SubClassOf( ) # Class: (statoconial membrane) AnnotationAssertion(Annotation( ) Annotation( ) "An acellular membrane in the vestibular labyrinth that is composed of the otoconial layer, gelatinous layer, and a subcupular meshwork.") AnnotationAssertion( "FMA:75570") AnnotationAssertion(Annotation( "ISBN:1565939948") "otoconial-statoconial membrane") AnnotationAssertion( "otolith membrane") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0016567") AnnotationAssertion(rdfs:comment "See https://sourceforge.net/p/obo/zebrafish-anatomy-zfa-term-requests/132/") AnnotationAssertion(rdfs:label "statoconial membrane") SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "Wikipedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (gelatinous layer of statoconial membrane) AnnotationAssertion( "FMA:75588") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0016568") AnnotationAssertion(rdfs:label "gelatinous layer of statoconial membrane") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (subcupular meshwork of statoconial membrane) AnnotationAssertion(Annotation( "ISBN:1565939948") "An acellular membrane in the inner ear that is part of the statoconial membrane and consists of long branching filaments cross-bridged to one another. The filaments are continuous with those of the otolithic membrane on one side and with the surface of the epithelium on the other.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0016569") AnnotationAssertion(rdfs:label "subcupular meshwork of statoconial membrane") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lamina of gray matter of spinal cord) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:68861") AnnotationAssertion(Annotation( "FMA:68861") "rexed lamina") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0016570") AnnotationAssertion(rdfs:label "lamina of gray matter of spinal cord") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete lamina II of gray matter of spinal cord) AnnotationAssertion( "UBERON:0002181") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0016573") AnnotationAssertion(rdfs:label "obsolete lamina II of gray matter of spinal cord") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (lamina III of gray matter of spinal cord) AnnotationAssertion( ) AnnotationAssertion( "FMA:68864") AnnotationAssertion(Annotation( "FMA:68864") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "lamina spinale III") AnnotationAssertion(Annotation( "FMA:68864") "rexed lamina III") AnnotationAssertion(Annotation( "FMA:68864") "spinal lamina III") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:1695") "Rexed's lamina III") AnnotationAssertion(Annotation( "NeuroNames:1695") "lamina 3") AnnotationAssertion(Annotation( "NeuroNames:1695") "lamina III") AnnotationAssertion(Annotation( "NeuroNames:1695") Annotation( ) "lamina spinalis III") AnnotationAssertion( "UBERON:0016574") AnnotationAssertion(rdfs:label "lamina III of gray matter of spinal cord") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lamina IV of gray matter of spinal cord) AnnotationAssertion( ) AnnotationAssertion( "FMA:68865") AnnotationAssertion(Annotation( "FMA:68865") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "lamina spinale IV") AnnotationAssertion(Annotation( "FMA:68865") "rexed lamina IV") AnnotationAssertion(Annotation( "FMA:68865") "spinal lamina IV") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:1696") "Rexed's lamina IV") AnnotationAssertion(Annotation( "NeuroNames:1696") "lamina 4") AnnotationAssertion(Annotation( "NeuroNames:1696") "lamina IV") AnnotationAssertion(Annotation( "NeuroNames:1696") Annotation( ) "lamina spinalis IV") AnnotationAssertion( "UBERON:0016575") AnnotationAssertion(rdfs:label "lamina IV of gray matter of spinal cord") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lamina V of gray matter of spinal cord) AnnotationAssertion(Annotation( ) "Spinal lamina V is a lamina of the spinal cord. It is also known as the neck of the posterior horn.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:68866") AnnotationAssertion(Annotation( "FMA:68866") "rexed lamina V") AnnotationAssertion(Annotation( "FMA:68866") "spinal lamina V") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:1698") "Rexed's lamina V") AnnotationAssertion(Annotation( "NeuroNames:1698") "lamina 5") AnnotationAssertion(Annotation( "NeuroNames:1698") "lamina V") AnnotationAssertion(Annotation( "NeuroNames:1698") Annotation( ) "lamina spinalis V") AnnotationAssertion(Annotation( "NeuroNames:1698") "neck of the dorsal horn") AnnotationAssertion( "UBERON:0016576") AnnotationAssertion(rdfs:label "lamina V of gray matter of spinal cord") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lamina VI of gray matter of spinal cord) AnnotationAssertion(Annotation( ) "Spinal lamina VI is a lamina of the spinal cord. It is also known as the base of the posterior horn.") AnnotationAssertion( "consider splitting") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37632") AnnotationAssertion( "FMA:68867") AnnotationAssertion( "MA:0001120") AnnotationAssertion(Annotation( "FMA:68867") "rexed lamina VI") AnnotationAssertion(Annotation( "FMA:68867") "spinal lamina VI") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:1699") "Rexed's lamina VI") AnnotationAssertion(Annotation( "NeuroNames:2007") "basal nucleus of the dorsal horn") AnnotationAssertion(Annotation( "NeuroNames:2007") "base of dorsal horn of spinal cord") AnnotationAssertion(Annotation( "NeuroNames:2007") "base of posterior horn of spinal cord") AnnotationAssertion(Annotation( "NeuroNames:1699") "base of the dorsal horn") AnnotationAssertion(Annotation( "NeuroNames:2007") "base of the posterior horn") AnnotationAssertion(Annotation( "NeuroNames:2007") Annotation( ) "basis cornuis dorsalis") AnnotationAssertion(Annotation( "NeuroNames:2007") Annotation( ) "basis cornus dorsalis") AnnotationAssertion(Annotation( "NeuroNames:2007") Annotation( ) "basis cornus dorsalis medullae spinalis") AnnotationAssertion(Annotation( "NeuroNames:2007") Annotation( ) "basis cornus posterioris") AnnotationAssertion(Annotation( "NeuroNames:2007") Annotation( ) "basis cornus posterioris medullae spinalis") AnnotationAssertion(Annotation( "NeuroNames:1699") Annotation( ) "lamina 6") AnnotationAssertion(Annotation( "NeuroNames:1699") "lamina VI") AnnotationAssertion(Annotation( "NeuroNames:1699") Annotation( ) "lamina VI") AnnotationAssertion(Annotation( "NeuroNames:1699") Annotation( ) "lamina spinalis VI") AnnotationAssertion(Annotation( "MA:0001120") "spinal cord basal nucleus") AnnotationAssertion( "UBERON:0016577") AnnotationAssertion(rdfs:label "lamina VI of gray matter of spinal cord") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lamina VII of gray matter of spinal cord) AnnotationAssertion( ) AnnotationAssertion( "FMA:68868") AnnotationAssertion(Annotation( "FMA:68868") "rexed lamina VII") AnnotationAssertion(Annotation( "FMA:68868") "spinal lamina VII") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:1700") "Rexed's lamina VII") AnnotationAssertion(Annotation( "NeuroNames:1700") Annotation( ) "lamina 7") AnnotationAssertion(Annotation( "NeuroNames:1700") "lamina VII") AnnotationAssertion(Annotation( "NeuroNames:1700") Annotation( ) "lamina VII") AnnotationAssertion(Annotation( "NeuroNames:1700") Annotation( ) "lamina spinalis VII") AnnotationAssertion( "UBERON:0016578") AnnotationAssertion(rdfs:label "lamina VII of gray matter of spinal cord") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lamina VIII of gray matter of spinal cord) AnnotationAssertion( ) AnnotationAssertion( "FMA:68869") AnnotationAssertion(Annotation( "FMA:68869") "rexed lamina VIII") AnnotationAssertion(Annotation( "FMA:68869") "spinal lamina VIII") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:1701") "Rexed's lamina VIII") AnnotationAssertion(Annotation( "NeuroNames:1701") Annotation( ) "lamina 8") AnnotationAssertion(Annotation( "NeuroNames:1701") "lamina VIII") AnnotationAssertion(Annotation( "NeuroNames:1701") Annotation( ) "lamina spinalis") AnnotationAssertion( "UBERON:0016579") AnnotationAssertion(rdfs:label "lamina VIII of gray matter of spinal cord") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lamina IX of gray matter of spinal cord) AnnotationAssertion( "FMA:68870") AnnotationAssertion(Annotation( "FMA:68870") "rexed lamina IX") AnnotationAssertion(Annotation( "FMA:68870") "spinal lamina IX") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0016580") AnnotationAssertion(rdfs:label "lamina IX of gray matter of spinal cord") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete rexed lamina xi) AnnotationAssertion( "FMA:68872") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0016593") AnnotationAssertion(rdfs:comment "Rexed lamina system typically extends to X") AnnotationAssertion(rdfs:label "obsolete rexed lamina xi") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete rexed lamina xii) AnnotationAssertion( "FMA:68873") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0016594") AnnotationAssertion(rdfs:comment "Rexed lamina system typically extends to X") AnnotationAssertion(rdfs:label "obsolete rexed lamina xii") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (nucleus proprius of spinal cord) AnnotationAssertion(Annotation( ) "The Nucleus proprius is a layer of the spinal cord adjacent to the substantia gelatinosa. Nucleus proprius constitutes the bulk of the dorsal horn and receives inputs from the dorsal root ganglions that carry sensory information, such as light touch, as well as pain and temperature information. Cells in this nucleus project to deeper laminae of the spinal cord, to the posterior column nuclei, and to other supraspinal relay centers including the midbrain, thalamus, and hypothalamus. Rexed laminae III, IV, and V make up the nucleus propius Nucleus proprius (NP), along with nucleus dorsalis (ND) are involved in sensing fine touch and proprioception.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:73906") AnnotationAssertion(Annotation( "FMA:73906") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "nucleus proprius medullae spinalis") AnnotationAssertion(Annotation( "FMA:73906") "proper sensory nucleus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "nucleus proprius") AnnotationAssertion(Annotation( "NeuroNames:1633") "nucleus proprius") AnnotationAssertion(Annotation( "NeuroNames:1633") Annotation( ) "nucleus proprius columnae posterioris") AnnotationAssertion(Annotation( "NeuroNames:1633") Annotation( ) "nucleus proprius cornu dorsalis") AnnotationAssertion(Annotation( "NeuroNames:1633") Annotation( ) "nucleus proprius dorsalis") AnnotationAssertion(Annotation( "NeuroNames:1633") "nucleus proprius of the spinal cord") AnnotationAssertion(Annotation( "NeuroNames:1633") "proper sensory nucleus") AnnotationAssertion( "UBERON:0016610") AnnotationAssertion(rdfs:label "nucleus proprius of spinal cord") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (auditory hillocks, pharyngeal arch 1 derived) AnnotationAssertion(Annotation( ) "A collection of protruberances derived from pharyngeal arch 1 that develop into the tragus, crus of the helix, and helix.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0016611") AnnotationAssertion(rdfs:label "auditory hillocks, pharyngeal arch 1 derived") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (auditory hillocks, pharyngeal arch 2 derived) AnnotationAssertion(Annotation( ) "A collection of protruberances derived from pharyngeal arch 2 that develop into the concha, antihelix and antitragus.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0016612") AnnotationAssertion(rdfs:label "auditory hillocks, pharyngeal arch 2 derived") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (neurovascular bundle) AnnotationAssertion(Annotation( "ncithesaurus:Neurovascular_Bundle") "A body structure consisting of nerves traveling together with arteries, veins, and/or lymphatics.") AnnotationAssertion( ) AnnotationAssertion( "FMA:32419") AnnotationAssertion( "NCIT:C74603") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0016630") AnnotationAssertion(rdfs:label "neurovascular bundle") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (actinopterygian frontal-parietal joint) AnnotationAssertion(Annotation( "ZFA:0005608") Annotation( "ZFIN:ZDB-PUB-060323-12") "Fibrous joint connecting the actinopterygian frontal bone to the actinopterygian parietal bone.") AnnotationAssertion( "TAO:0005255") AnnotationAssertion( "ZFA:0005608") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "ZFA:0005608") "coronal suture") AnnotationAssertion(Annotation( "ZFA:0005608") Annotation( ) "frontal-parietal joint") AnnotationAssertion( "UBERON:0016631") AnnotationAssertion(rdfs:label "actinopterygian frontal-parietal joint") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (isthmus of fallopian tube) AnnotationAssertion( "FMA:18306") AnnotationAssertion(Annotation( "FMA:18306") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "isthmus tubae uterinae") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:18306") "isthmus of oviduct") AnnotationAssertion(Annotation( "FMA:18306") "isthmus of uterine tube") AnnotationAssertion(Annotation( "FMA:18306") "uterine tube isthmus") AnnotationAssertion( "UBERON:0016632") AnnotationAssertion(rdfs:label "isthmus of fallopian tube") SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (parvocellular reticular nucleus) AnnotationAssertion(Annotation( ) "The parvocellular reticular nucleus is part of the brain located dorsolateral to the nucleus reticularis pontis caudalis. The dorsal portion of the reticular nucleus has been shown to innervate the mesencephalic trigeminal nucleus and its surrounding area. Also, it projects to the facial nucleus, hypoglossal nucleus and parabrachial nucleus along with parts of the caudal parvocellular reticular formation. This nucleus is also involved in expiration with a part of the gigantocellular nucleus.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "DHBA:12618") AnnotationAssertion( "FMA:72575") AnnotationAssertion( "HBA:9624") AnnotationAssertion( "MBA:852") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) "nucleus reticularis parvocellularis") AnnotationAssertion(Annotation( "FMA:72575") "parvicellular reticular nucleus") AnnotationAssertion(Annotation( "FMA:72575") "parvocellular reticular nucleus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:728") Annotation( ) "nucleus parvocellularis") AnnotationAssertion(Annotation( "NeuroNames:728") Annotation( ) "nucleus reticularis parvicellularis") AnnotationAssertion(Annotation( ) "nucleus reticularis parvocellaris") AnnotationAssertion(Annotation( "NeuroNames:728") Annotation( ) "nucleus reticularis parvocellularis") AnnotationAssertion(Annotation( "NeuroNames:728") "parvicellular reticular nucleus") AnnotationAssertion(Annotation( ) "parvocellular nucleus") AnnotationAssertion(Annotation( "NeuroNames:728") "parvocellular reticular nucleus") AnnotationAssertion( "UBERON:0016633") AnnotationAssertion(rdfs:label "parvocellular reticular nucleus") SubClassOf( ) # Class: (premotor cortex) AnnotationAssertion(Annotation( ) "The premotor cortex is an area of motor cortex lying within the frontal lobe of the brain. It extends 3 mm anterior to the primary motor cortex, near the Sylvian fissure, before narrowing to approximately 1 mm near the medial longitudinal fissure, which serves as the posterior border for the prefrontal cortex. The premotor cortex is largely equivalent to Brodmann area 6. Activity within this region is critical to the sensory guidance of movement and control of proximal and trunk muscles of the body.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "DHBA:10168") AnnotationAssertion( "FMA:224852") AnnotationAssertion( "MBA:993") AnnotationAssertion(Annotation( "DHBA:10168") "premotor cortex (area 6)") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:2331") "intermediate precentral cortex") AnnotationAssertion(Annotation( "NeuroNames:2331") "nonprimary motor cortex") AnnotationAssertion(Annotation( ) "premotor") AnnotationAssertion(Annotation( "NeuroNames:2331") "premotor area") AnnotationAssertion(Annotation( "NeuroNames:2331") "premotor cortex") AnnotationAssertion(Annotation( ) "premotor region") AnnotationAssertion(Annotation( "NeuroNames:2331") "promotor cortex") AnnotationAssertion(Annotation( "NeuroNames:2331") "secondary motor areas") AnnotationAssertion(Annotation( "NeuroNames:2331") "secondary motor cortex") AnnotationAssertion(Annotation( "NeuroNames:2331") "secondary somatomotor areas") AnnotationAssertion( "UBERON:0016634") AnnotationAssertion(rdfs:label "premotor cortex") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (paragigantocellular nucleus) AnnotationAssertion( "DHBA:12626") AnnotationAssertion( "MBA:938") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0016635") AnnotationAssertion(rdfs:label "paragigantocellular nucleus") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (supplemental motor cortex) AnnotationAssertion(Annotation( ) "The supplementary motor area (SMA) is a part of the sensorimotor cerebral cortex (perirolandic, i.e. on each side of the Rolando or central sulcus). It was included, on purely cytoarchitectonic arguments, in area 6 of Brodmann and the Vogts. It is located on the medial face of the hemisphere, just in front of primary motor cortex. This is an element that appeared late in evolution, in monkeys, linked to the appearance of a true medial pallidum.") AnnotationAssertion(Annotation( "FMA:224858") Annotation( "FMA:CMA") Annotation( ) "jPL (SMC)") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:224858") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:3176") "SMA proper") AnnotationAssertion(Annotation( "NeuroNames:3176") "area F3") AnnotationAssertion(Annotation( "FMA:224858") "juxtapositional lobule cortex") AnnotationAssertion(Annotation( ) Annotation( "NeuroNames:3176") "supplementary motor area") AnnotationAssertion(Annotation( "NeuroNames:3176") "supplementary motor area (M II)") AnnotationAssertion(Annotation( "NeuroNames:3176") "supplementary motor cortex") AnnotationAssertion( "UBERON:0016636") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "supplemental motor cortex") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lateral periolivary nucleus) AnnotationAssertion(Annotation( ) "Lateral component of the periolivary nucleus.") AnnotationAssertion( "DHBA:12465") AnnotationAssertion( "FMA:226217") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0016637") AnnotationAssertion(rdfs:label "lateral periolivary nucleus") SubClassOf(Annotation( "cjm"^^xsd:string) ) # Class: (subparafascicular nucleus) AnnotationAssertion(Annotation( "NeuroNames:2253") "The term subparafascicular nucleus refers to a cell group located ventral to the parafascicular nucleus in the thalamus. Identified by internal structure, it is present in the human ( Mai-1997 ), the macaque ( Paxinos-2009a ), the rat ( Swanson-1998 ), and the mouse ( Hof-2000 ).") AnnotationAssertion( ) AnnotationAssertion( "DHBA:13054") AnnotationAssertion( "FMA:226239") AnnotationAssertion( "MBA:406") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:2253") Annotation( ) "nucleus subparafascicularis thalami") AnnotationAssertion(Annotation( "NeuroNames:2253") "subparafascicular nucleus") AnnotationAssertion(Annotation( "NeuroNames:2253") "subparafascicular nucleus of the thalamus") AnnotationAssertion(Annotation( "NeuroNames:2253") "subparafascicular nucleus thalamus") AnnotationAssertion(Annotation( "NeuroNames:2253") "subparafascicular thalamic nucleus") AnnotationAssertion( "UBERON:0016641") AnnotationAssertion(rdfs:label "subparafascicular nucleus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lateral paragigantocellular nucleus) AnnotationAssertion( ) AnnotationAssertion( "DHBA:12629") AnnotationAssertion( "FMA:72577") AnnotationAssertion( "HBA:9601") AnnotationAssertion( "MBA:978") AnnotationAssertion( "NLX:143582") AnnotationAssertion(Annotation( "FMA:72577") "lateral paragigantocellular reticular nucleus") AnnotationAssertion(Annotation( "FMA:72577") "paragigantocellular nucleus, lateral part") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:731") "lateral paragigantocellular nucleus") AnnotationAssertion(Annotation( "NeuroNames:731") Annotation( ) "nucleus paragigantocellularis lateralis") AnnotationAssertion(Annotation( "NeuroNames:731") "paragigantocellular nucleus, lateral part") AnnotationAssertion(Annotation( "NeuroNames:731") "paragigantocellular reticular nucleus, lateral part") AnnotationAssertion( "UBERON:0016824") AnnotationAssertion(rdfs:label "lateral paragigantocellular nucleus") SubClassOf( ) # Class: (dorsal paragigantocellular nucleus) AnnotationAssertion( ) AnnotationAssertion( "DHBA:12628") AnnotationAssertion( "FMA:72578") AnnotationAssertion( "HBA:9600") AnnotationAssertion( "MBA:970") AnnotationAssertion(Annotation( "FMA:72578") "dorsal paragigantocellular reticular nucleus") AnnotationAssertion(Annotation( "FMA:72578") "paragigantocellular nucleus, dorsal part") AnnotationAssertion(Annotation( "FMA:72578") "posterior paragigantocellular reticular nucleus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:732") "dorsal paragigantocellular nucleus") AnnotationAssertion(Annotation( "NeuroNames:732") Annotation( ) "nucleus paragigantocellularis dorsalis") AnnotationAssertion(Annotation( "NeuroNames:732") "paragigantocellular nucleus, dorsal part") AnnotationAssertion(Annotation( "NeuroNames:732") "paragigantocellular reticular nucleus, dorsal part") AnnotationAssertion( "UBERON:0016825") AnnotationAssertion(rdfs:label "dorsal paragigantocellular nucleus") SubClassOf( ) # Class: (paramedian medullary reticular complex) AnnotationAssertion( ) AnnotationAssertion( "FMA:72580") AnnotationAssertion(Annotation( "FMA:72580") "paramedian group (medullary reticular formation)") AnnotationAssertion(Annotation( "FMA:72580") "paramedian medullary reticular group") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:734") Annotation( ) "nuclei paramedianes myelencephali") AnnotationAssertion(Annotation( "NeuroNames:734") "paramedial reticular nuclei") AnnotationAssertion(Annotation( "NeuroNames:734") "paramedian group (medullary reticular formation)") AnnotationAssertion(Annotation( "NeuroNames:734") "paramedian medullary reticular group") AnnotationAssertion( "UBERON:0016826") AnnotationAssertion(rdfs:label "paramedian medullary reticular complex") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (dorsal paramedian reticular nucleus) AnnotationAssertion(Annotation( "NLX:143549") "Small nucleus in the brainstem of human, located adjacent and medial to the nucleus prepositus in the dorsal medulla, described in several atlases of human brain stem. In transverse sections, it is oval with its long axis aligned with the dorsal border of the brainstem. It begins at about the same A-P level as the nucleus prepositus, just rostral to the hypoglossal nucleus. It includes calretinin immunoreactive large cells with oval or polygonal cell bodies. Cells are not immunoreactive for either calbindin or parvalbumin, but a few fibers immunoreactive to each protein are found within its central region. Cells in PMD are also immunoreactive to nNOS, and immunoreactivity to a neurofilament protein shows many labeled cells and fibers. According to Baizer et al., no equivalent structure was observed in the cat, rat, mouse or monkey atlas although they did not look at the brains of the great apes.") AnnotationAssertion( ) AnnotationAssertion( "DHBA:12597") AnnotationAssertion( "FMA:72581") AnnotationAssertion( "NLX:143549") AnnotationAssertion(Annotation( "FMA:72581") "dorsal paramedian nuclei of raphe") AnnotationAssertion(Annotation( "FMA:72581") "dorsal paramedian nucleus") AnnotationAssertion(Annotation( "FMA:72581") "posterior paramedian nucleus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:735") "dorsal paramedian reticular nucleus") AnnotationAssertion(Annotation( "NeuroNames:735") Annotation( ) "nucleus paramedianus dorsalis") AnnotationAssertion(Annotation( "NeuroNames:735") Annotation( ) "nucleus paramedianus posterior") AnnotationAssertion(Annotation( "NeuroNames:735") Annotation( ) "nucleus reticularis paramedianus myelencephali") AnnotationAssertion( "UBERON:0016827") AnnotationAssertion(rdfs:label "dorsal paramedian reticular nucleus") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (paratrigeminal nucleus) AnnotationAssertion(Annotation( "NeuroNames:761") "The term paratrigeminal nucleus refers to a group of cells located lateral to the spinal trigeminal tract of the medulla and medial to the spinocerebellar tracts at the level of the spinal trigeminal nucleus. The cells, identified by Nissl stain, are partially embedded in the adjacent tracts; their distribution varies by species. The paratrigeminal nucleus may represent an extension of the lateral cervical nucleus into the medulla ( Swanson-2004 ). It is found in the human ( Carpenter-1983 ), the macaque ( Paxinos-2009a ), the rat ( Swanson-2004 ) and the mouse ( Paxinos-2001 ). In the functional model of central nervous system organization it is classified as part of the subcortical somatosensory system ( Swanson-2004 ).") AnnotationAssertion( ) AnnotationAssertion( "BAMS:PAT") AnnotationAssertion( "DHBA:12656") AnnotationAssertion( "FMA:72599") AnnotationAssertion( "HBA:9630") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:761") "lateral cervical nucleus, trigeminal extension") AnnotationAssertion(Annotation( "NeuroNames:761") Annotation( ) "nucleus paratrigeminalis") AnnotationAssertion(Annotation( "NeuroNames:761") "paratrigeminal nucleus") AnnotationAssertion( "UBERON:0016832") AnnotationAssertion(rdfs:label "paratrigeminal nucleus") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (lateral nucleus of trapezoid body) AnnotationAssertion(Annotation( "NeuroNames:2852") "One of two potential parts of the trapezoid nucleus. Separated by an indistinct boundary, the other is the medial trapezoid nucleus ( Crosby-1962 ). The existence of the trapezoid nucleus in the human is disputed ( Bazwinsky-2003 ).") AnnotationAssertion( ) AnnotationAssertion( "DHBA:12459") AnnotationAssertion( "DMBA:17274") AnnotationAssertion( "FMA:75730") AnnotationAssertion(Annotation( ) "LNTB") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:2852") "lateral nucleus of the trapezoid body") AnnotationAssertion(Annotation( "NeuroNames:2852") "lateral trapezoid nucleus") AnnotationAssertion( "UBERON:0016843") AnnotationAssertion(rdfs:label "lateral nucleus of trapezoid body") SubClassOf( ) SubClassOf(Annotation( "to be verified") ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (retroambiguus nucleus) AnnotationAssertion(Annotation( "NeuroNames:2319") "The term retroambiguus nucleus refers to a group of neurons in the medulla at the caudal end of the nucleus ambiguus, from which the cranial part of the accessory nerve originates ( Crosby-1962 ).") AnnotationAssertion( ) AnnotationAssertion( "FMA:77096") AnnotationAssertion( "HBA:9650") AnnotationAssertion(Annotation( "FMA:77096") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "nucleus retroambiguus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:2319") "nucleus retroambigualis") AnnotationAssertion(Annotation( "NeuroNames:2319") Annotation( ) "nucleus retroambigualis") AnnotationAssertion(Annotation( "NeuroNames:2319") "retroambiguus nucleus") AnnotationAssertion( "UBERON:0016848") AnnotationAssertion(rdfs:label "retroambiguus nucleus") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (obsolete subparabrachial nucleus) AnnotationAssertion(Annotation( ) "A cell group located ventral to the brachium conjunctivum in the general area where the medial and lateral parabrachial nuclei abut, shifting to the slightly more lateral position rostrally.") AnnotationAssertion( "UBERON:0002869") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0016849") AnnotationAssertion(rdfs:label "obsolete subparabrachial nucleus") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (nucleus of phrenic nerve) AnnotationAssertion(Annotation( ) "Neuron cell bodies located in the more medial portions of the anterior horn at cervical levels C3-C7 that innervate the diaphragm via the phrenic nerve.") AnnotationAssertion( ) AnnotationAssertion( "FMA:77458") AnnotationAssertion(Annotation( "FMA:77458") "phrenic neural nucleus") AnnotationAssertion(Annotation( "FMA:77458") "phrenic nucleus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:2004") Annotation( ) "nucleus nervi phrenici") AnnotationAssertion(Annotation( "NeuroNames:2004") "nucleus of phrenic nerve") AnnotationAssertion(Annotation( "NeuroNames:2004") "nucleus of the phrenic nerve") AnnotationAssertion(Annotation( "NeuroNames:2004") Annotation( ) "nucleus phrenicus columnae anterioris medullae spinalis") AnnotationAssertion(Annotation( "NeuroNames:2004") "phrenic nucleus of anterior column of spinal cord") AnnotationAssertion( "UBERON:0016850") AnnotationAssertion(rdfs:label "nucleus of phrenic nerve") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (renal fascia) AnnotationAssertion(Annotation( ) "A fascial pouch derived from extraperitoneal connective tissue that contains the kidneys, the suprarenal glands, the renal vessels and perirenal fat.") AnnotationAssertion( ) AnnotationAssertion( "FMA:18104") AnnotationAssertion(Annotation( "FMA:18104") "fascia of Zuckerkandl") AnnotationAssertion(Annotation( "FMA:18104") "gerota's capsule") AnnotationAssertion(Annotation( "FMA:18104") "gerota's fascia") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "Gerota capsule") AnnotationAssertion(Annotation( ) "fascia renalis") AnnotationAssertion( "UBERON:0016851") AnnotationAssertion(rdfs:label "renal fascia") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (skin scent gland) AnnotationAssertion(Annotation( ) "A scent gland that is part of the skin.") AnnotationAssertion( ) AnnotationAssertion( "cutaneous scent gland") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0016852") AnnotationAssertion(rdfs:label "skin scent gland") SubClassOf( ) SubClassOf( ) SubClassOf( ) # Class: (interdigital gland) AnnotationAssertion(Annotation( ) "A skin gland found in the interdigital region of some mammals.") AnnotationAssertion( ) AnnotationAssertion(Annotation( ) "interdigital sinus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0016853") AnnotationAssertion(rdfs:label "interdigital gland") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (dorsal part of optic cup) AnnotationAssertion(Annotation( ) "The dorsal region of the optic cup that gives rise to the dorsal part of the retina.") AnnotationAssertion(Annotation( ) "dorsal optic cup") AnnotationAssertion(Annotation( ) "dorsal region of optic cup") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0016854") AnnotationAssertion(rdfs:label "dorsal part of optic cup") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (ventral part of optic cup) AnnotationAssertion(Annotation( ) "The ventral region of the optic cup that gives rise to the ventral part of the retina.") AnnotationAssertion(Annotation( ) "ventral optic cup") AnnotationAssertion(Annotation( ) "ventral region of optic cup") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0016855") AnnotationAssertion(rdfs:comment "optic fissure, hyaloid artery, pecten") AnnotationAssertion(rdfs:label "ventral part of optic cup") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (digit 6) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A digit that is part of a digit 6 plus metapodial segment.") AnnotationAssertion( "6"^^xsd:nonNegativeInteger) AnnotationAssertion( "autopod digit 6") AnnotationAssertion(Annotation( ) Annotation( ) "digit VI") AnnotationAssertion( "limb digit 6") AnnotationAssertion( "sixth digit") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0016856") AnnotationAssertion(rdfs:label "digit 6") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (digit 7) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A digit that is part of a digit 7 plus metapodial segment.") AnnotationAssertion( "7"^^xsd:nonNegativeInteger) AnnotationAssertion( "autopod digit 7") AnnotationAssertion(Annotation( ) Annotation( ) "digit VII") AnnotationAssertion( "limb digit 7") AnnotationAssertion( "seventh digit") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0016857") AnnotationAssertion(rdfs:label "digit 7") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (digit 8) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A digit that is part of a digit 8 plus metapodial segment.") AnnotationAssertion( "8"^^xsd:nonNegativeInteger) AnnotationAssertion( "autopod digit 8") AnnotationAssertion(Annotation( ) Annotation( ) "digit VIII") AnnotationAssertion( "eighth digit") AnnotationAssertion( "limb digit 8") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0016858") AnnotationAssertion(rdfs:label "digit 8") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (digit 6 plus metapodial segment) AnnotationAssertion(Annotation( ) "A subdivision of the autopod consisting of digit 6 plus the region incorporating a single metapodial element. These segments are typically repeated along the pre-axiom to post-axial axis.") AnnotationAssertion(Annotation( ) "this class represents a series of phalanges plus a metapodial element plus associated soft tissues. Instances of this class typically do not form a distinct unit.") AnnotationAssertion(Annotation( ) "digit 6") AnnotationAssertion(Annotation( ) Annotation( ) "digit 6 ( phalanges plus metapodial) plus soft tissue") AnnotationAssertion(Annotation( ) "digit 6 digitopodial subdivision") AnnotationAssertion(Annotation( ) "digit 6 ray") AnnotationAssertion(Annotation( ) Annotation( ) "digit VI plus metapodial segment") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0016866") AnnotationAssertion(rdfs:label "digit 6 plus metapodial segment") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (digit 7 plus metapodial segment) AnnotationAssertion(Annotation( ) "A subdivision of the autopod consisting of digit 7 plus the region incorporating a single metapodial element. These segments are typically repeated along the pre-axiom to post-axial axis.") AnnotationAssertion(Annotation( ) "this class represents a series of phalanges plus a metapodial element plus associated soft tissues. Instances of this class typically do not form a distinct unit.") AnnotationAssertion(Annotation( ) "digit 7") AnnotationAssertion(Annotation( ) Annotation( ) "digit 7 ( phalanges plus metapodial) plus soft tissue") AnnotationAssertion(Annotation( ) "digit 7 digitopodial subdivision") AnnotationAssertion(Annotation( ) "digit 7 ray") AnnotationAssertion(Annotation( ) Annotation( ) "digit VII plus metapodial segment") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0016867") AnnotationAssertion(rdfs:label "digit 7 plus metapodial segment") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (digit 8 plus metapodial segment) AnnotationAssertion(Annotation( ) "A subdivision of the autopod consisting of digit 8 plus the region incorporating a single metapodial element. These segments are typically repeated along the pre-axiom to post-axial axis.") AnnotationAssertion(Annotation( ) "this class represents a series of phalanges plus a metapodial element plus associated soft tissues. Instances of this class typically do not form a distinct unit.") AnnotationAssertion(Annotation( ) "digit 8") AnnotationAssertion(Annotation( ) Annotation( ) "digit 8 ( phalanges plus metapodial) plus soft tissue") AnnotationAssertion(Annotation( ) "digit 8 digitopodial subdivision") AnnotationAssertion(Annotation( ) "digit 8 ray") AnnotationAssertion(Annotation( ) Annotation( ) "digit VIII plus metapodial segment") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0016868") AnnotationAssertion(rdfs:label "digit 8 plus metapodial segment") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (digit 6 digitopodial skeleton) AnnotationAssertion(Annotation( ) "A subdivision of the skeleton of the autopod consisting of the phalanges of digit 6 plus the associated metapodial element.") AnnotationAssertion( "this class represents a series of phalanges plus a metapodial element. In comparative anatomy terminology we would call this a 'digit', but the label 'digit' is sometimes used to exclude metapodials and to include soft tissue. This series of elements is hypothesized to be homologous to radials.") AnnotationAssertion(Annotation( ) Annotation( ) "digit VI digitopodial skeleton") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "digit 6") AnnotationAssertion(Annotation( ) "digit 6 skeleton") AnnotationAssertion( "UBERON:0016876") AnnotationAssertion(rdfs:label "digit 6 digitopodial skeleton") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (digit 7 digitopodial skeleton) AnnotationAssertion(Annotation( ) "A subdivision of the skeleton of the autopod consisting of the phalanges of digit 7 plus the associated metapodial element.") AnnotationAssertion( "this class represents a series of phalanges plus a metapodial element. In comparative anatomy terminology we would call this a 'digit', but the label 'digit' is sometimes used to exclude metapodials and to include soft tissue. This series of elements is hypothesized to be homologous to radials.") AnnotationAssertion(Annotation( ) Annotation( ) "digit VII digitopodial skeleton") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "digit 7") AnnotationAssertion(Annotation( ) "digit 7 skeleton") AnnotationAssertion( "UBERON:0016877") AnnotationAssertion(rdfs:label "digit 7 digitopodial skeleton") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (digit 8 digitopodial skeleton) AnnotationAssertion(Annotation( ) "A subdivision of the skeleton of the autopod consisting of the phalanges of digit 8 plus the associated metapodial element.") AnnotationAssertion( "this class represents a series of phalanges plus a metapodial element. In comparative anatomy terminology we would call this a 'digit', but the label 'digit' is sometimes used to exclude metapodials and to include soft tissue. This series of elements is hypothesized to be homologous to radials.") AnnotationAssertion(Annotation( ) Annotation( ) "digit VIII digitopodial skeleton") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "digit 8") AnnotationAssertion(Annotation( ) "digit 8 skeleton") AnnotationAssertion( "UBERON:0016878") AnnotationAssertion(rdfs:label "digit 8 digitopodial skeleton") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (future central nervous system) AnnotationAssertion(Annotation( ) "Primordium that develops into the central nervous system.") AnnotationAssertion( "UBERON:3000469") AnnotationAssertion( "future CNS") AnnotationAssertion( "presumptive central nervous system") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0016879") AnnotationAssertion(rdfs:label "future central nervous system") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (future nervous system) AnnotationAssertion(Annotation( ) "Primordium that develops into the nervous system.") AnnotationAssertion( "UBERON:3000477") AnnotationAssertion( "AAO:0000477") AnnotationAssertion(Annotation( "AAO:0000477") "presumptive nervous system") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0016880") AnnotationAssertion(rdfs:label "future nervous system") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (craniopharyngeal canal) AnnotationAssertion(Annotation( ) "The craniopharyngeal canal, is an anatomical feature sometimes found in the sphenoid bone opening to the sella turcica. It is a canal (a passage or channel) sometimes found extending from the anterior part of the fossa hypophyseos of the sphenoid bone to the under surface of the skull, and marks the original position of Rathke's pouch; while at the junction of the septum of the nose with the palate traces of the stomodeal end are occasionally present.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "CALOHA:TS-2347") AnnotationAssertion( "EMAPA:19194") AnnotationAssertion( "NCIT:C12357") AnnotationAssertion( "uberon") AnnotationAssertion( "bucconeural duct") AnnotationAssertion(Annotation( ) "craniopharyngeal duct") AnnotationAssertion( "UBERON:0016881") AnnotationAssertion(rdfs:label "craniopharyngeal canal") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (intertarsal-type crurotarsal joint) AnnotationAssertion(Annotation( ) "An ankle joint that passes between the astragalus and calcaneum.") AnnotationAssertion( "The ankle joint of pseudosuchians (including crocodilians) and phytosaurs, passing between the astragalus and calcaneum, is also called crurotarsal joint in the literature.[5][6] In the skeletons of the phytosaurs and most of the pseudosuchians this joint bends around a peg on the astragalus which fits into a socket in the calcaneum (the 'crocodile normal' tarsus); only in the skeletons of the ornithosuchid pseudosuchians a peg on the calcaneum fits into a socket in the astragalus (the 'crocodile reversed' tarsus).[3] Strictly speaking this ankle isn't a crurotarsal joint in the previously discussed sense, as it's situated between the two proximal tarsal bones. However, while calcaneum isn't fixed to the fibula, the astragalus is fixed to the tibia by a suture and thus in practice it functions as an extension of the crus.[7]") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "ISBN:0073040584"^^xsd:string) "crurotarsal joint") AnnotationAssertion(Annotation( "ISBN:0073040584"^^xsd:string) "intertarsal joint") AnnotationAssertion( "UBERON:0016882") AnnotationAssertion(rdfs:label "intertarsal-type crurotarsal joint") SubClassOf(Annotation( "UBERON") ) # Class: (ovarian fossa) AnnotationAssertion(Annotation( ) Annotation( "MGI:anna"^^xsd:string) "A shallow depression on the lateral wall of the pelvis, wherein the ovary lies. This fossa has the following boundaries: superiorly: by the external iliac vessels anteriorly and inferiorly: by the broad ligament of the uterus posteriorly: by the ureter and internal iliac vessels.") AnnotationAssertion( ) AnnotationAssertion( "FMA:21030") AnnotationAssertion(Annotation( "MGI:anna"^^xsd:string) "Claudius fossa") AnnotationAssertion(Annotation( ) Annotation( ) "fossa ovarica") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0016883") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "ovarian fossa") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (shoulder joint) AnnotationAssertion(Annotation( ) "The joint that is formed by the union of the humerus, the scapula (or shoulder blade), and the clavicle (or collarbone). Commonly thought of as a single joint, the shoulder is actually made up of two separate joints - the glenohumeral and acromioclavicular joints.") AnnotationAssertion( ) AnnotationAssertion( "joint of shoulder region") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0016884") AnnotationAssertion(rdfs:label "shoulder joint") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "definitional"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (epithelium of terminal part of digestive tract) AnnotationAssertion(Annotation( ) "Epithelium lining the distalmost portion of the digestive tract.") AnnotationAssertion( "BTO:0005445") AnnotationAssertion( "WBbt:0005800") AnnotationAssertion(Annotation( "BTO:0005445") "rectum epithelium") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0016885") AnnotationAssertion(rdfs:label "epithelium of terminal part of digestive tract") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (muscle tissue of terminal part of digestive tract) AnnotationAssertion(Annotation( ) "Any muscle tissue of the distalmost portion of the digestive tract.") AnnotationAssertion( "rectum muscle") AnnotationAssertion( "rectum muscle structure") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0016886") AnnotationAssertion(rdfs:label "muscle tissue of terminal part of digestive tract") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (entire extraembryonic component) AnnotationAssertion(Annotation( "AEO:0000195") Annotation( "AEO:JB"^^xsd:string) "The part of the conceptus that may be lost before birth or will be discarded at birth, or when the embryo becomes an independent organism.") AnnotationAssertion( "AEO:0000195") AnnotationAssertion( "EHDAA2:0000003") AnnotationAssertion( "EMAPA:16042") AnnotationAssertion( "extra-embryonic component") AnnotationAssertion(Annotation( "AEO:0000195") "extraembryonic component") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0016887") AnnotationAssertion(rdfs:label "entire extraembryonic component") SubClassOf(Annotation( "AEO"^^xsd:string) ) SubClassOf(Annotation( "AEO"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (transitional anatomical structure) AnnotationAssertion(Annotation( "AEO:0000132") Annotation( "AEO:JB"^^xsd:string) "An embryonic anatomical entity that will turn into one or more other anatomical entities, perhaps with other anatomical entities, later in development.") AnnotationAssertion( "AEO:0000132") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0016888") AnnotationAssertion(rdfs:label "transitional anatomical structure") SubClassOf(Annotation( "AEO"^^xsd:string) ) # Class: (intrahepatic branch of portal vein) AnnotationAssertion( ) AnnotationAssertion( "FMA:15417") AnnotationAssertion(Annotation( "FMA:15417") "intrahepatic part of portal vein") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0016890") AnnotationAssertion(rdfs:label "intrahepatic branch of portal vein") SubClassOf( ) SubClassOf( ) # Class: (periosteum of long bone) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A periosteum that is part of a long bone.") AnnotationAssertion( "FMA:32677") AnnotationAssertion(Annotation( "FMA:32677") "long bone periosteum") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0016896") AnnotationAssertion(rdfs:label "periosteum of long bone") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (frenulum of lip) AnnotationAssertion( ) AnnotationAssertion( "FMA:59820") AnnotationAssertion( "frenulum labii") AnnotationAssertion( "labial frenulum") AnnotationAssertion(Annotation( "FMA:59820") "lip frenulum") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:59820") "medial labial frenulum") AnnotationAssertion( "UBERON:0016910") AnnotationAssertion(rdfs:label "frenulum of lip") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (frenulum of upper lip) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A frenulum of lip that is part of a upper lip.") AnnotationAssertion( ) AnnotationAssertion( "FMA:59821") AnnotationAssertion(Annotation( ) "f. labii superioris") AnnotationAssertion(Annotation( ) "frenulum labii superioris") AnnotationAssertion(Annotation( "FMA:59821") "upper lip frenulum") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0016912") AnnotationAssertion(rdfs:label "frenulum of upper lip") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (frenulum of lower lip) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A frenulum of lip that is part of a lower lip.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:59822") AnnotationAssertion( "frenulum labii inferioris") AnnotationAssertion(Annotation( "FMA:59822") "lower lip frenulum") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "f. labii inferioris") AnnotationAssertion(Annotation( ) Annotation( ) "frenulum labii inferioris") AnnotationAssertion( "UBERON:0016913") AnnotationAssertion(rdfs:label "frenulum of lower lip") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lamina lucida) AnnotationAssertion( ) AnnotationAssertion( "FMA:62921") AnnotationAssertion( "NCIT:C32917") AnnotationAssertion(Annotation( "FMA:62921") "electron-lucent layer of basal lamina of connective tissue") AnnotationAssertion(Annotation( "FMA:62921") "lamina rara") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0016914") AnnotationAssertion(rdfs:label "lamina lucida") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (vermilion) AnnotationAssertion(Annotation( ) "The zone of the skin that surrounds a lip and is colored red due to thin epithelium and presence of eleidin.") AnnotationAssertion( "vermilion border") AnnotationAssertion( ) AnnotationAssertion( "FMA:59824") AnnotationAssertion( "vermilion border of lip") AnnotationAssertion( "vermilion of lip") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "vermillion") AnnotationAssertion( "UBERON:0016915") AnnotationAssertion(rdfs:label "vermilion") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (upper vermilion) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A vermilion that is part of a upper lip.") AnnotationAssertion( ) AnnotationAssertion( "FMA:59827") AnnotationAssertion( "vermilion border of upper lip") AnnotationAssertion(Annotation( "FMA:59827") "vermilion of upper lip") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0016918") AnnotationAssertion(rdfs:label "upper vermilion") SubClassOf( ) SubClassOf( ) # Class: (lower vermilion) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A vermilion that is part of a lower lip.") AnnotationAssertion( ) AnnotationAssertion( "FMA:59828") AnnotationAssertion( "vermilion border of lower lip") AnnotationAssertion(Annotation( "FMA:59828") "vermilion of lower lip") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0016919") AnnotationAssertion(rdfs:label "lower vermilion") SubClassOf( ) SubClassOf( ) # Class: (descending trunk of arch of aorta) AnnotationAssertion( "FMA:13082") AnnotationAssertion(Annotation( "HP:0012305") "descending aortic arch") AnnotationAssertion(Annotation( "FMA:13082") "descending limb of arch of aorta") AnnotationAssertion(Annotation( "FMA:13082") "descending trunk of aortic arch") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0016920") AnnotationAssertion(rdfs:label "descending trunk of arch of aorta") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (preductal region of aortic arch) AnnotationAssertion(Annotation( ) "Area of aorta proximal to the ductus arteriosus.") AnnotationAssertion( ) AnnotationAssertion( "FMA:3774") AnnotationAssertion(Annotation( "FMA:3774") "preligamental region of aortic arch") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0016923") AnnotationAssertion(rdfs:label "preductal region of aortic arch") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (postductal region of aortic arch) AnnotationAssertion(Annotation( ) "Area of aorta distal to the ductus arteriosus.") AnnotationAssertion( ) AnnotationAssertion( "FMA:3776") AnnotationAssertion(Annotation( "FMA:3776") "postligamental region of aortic arch") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0016924") AnnotationAssertion(rdfs:label "postductal region of aortic arch") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (juxtaductal region of aortic arch) AnnotationAssertion(Annotation( ) "Area of aorta at the area of insertion to the ductus arteriosus.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:3771") AnnotationAssertion( "FMA:3778") AnnotationAssertion(Annotation( "FMA:3771") "isthmus aorta") AnnotationAssertion(Annotation( "FMA:3778") "juxtaligamental region of aortic arch") AnnotationAssertion( "uberon") AnnotationAssertion( "aortic isthmus") AnnotationAssertion( "UBERON:0016925") AnnotationAssertion(rdfs:label "juxtaductal region of aortic arch") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (mucus body coating) AnnotationAssertion(Annotation( ) "A coating of mucus that is produced by the skin and covers all or most of the body of an animal.") AnnotationAssertion(Annotation( "BTO:0005082") "The epidermal mucus of fish regulates swimming speed by controlling the hydrodynamic resistance of the skin surface. The mucus is also presumed to serve as a defence against pathogenic organisms and is intimately associated with osmoregulation.") AnnotationAssertion( "BTO:0005082") AnnotationAssertion( "uberon") AnnotationAssertion( "mucous body coating") AnnotationAssertion( "UBERON:0016926") AnnotationAssertion(rdfs:label "mucus body coating") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (mucus cocoon) AnnotationAssertion(Annotation( ) "A mucous covering produced nocturnally by some fish that is used to envelope the whole animal.") AnnotationAssertion( "uberon") AnnotationAssertion( "mucous cocoon") AnnotationAssertion( "UBERON:0016927") AnnotationAssertion(rdfs:label "mucus cocoon") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (metaphysis of fibula) AnnotationAssertion(Annotation( "UBERON:nv") "A metaphysis that is part of a fibula.") AnnotationAssertion( "FMA:33745") AnnotationAssertion(Annotation( "FMA:33745") "fibula metaphysis") AnnotationAssertion( "fibular metaphysis") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0016928") AnnotationAssertion(rdfs:label "metaphysis of fibula") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lingual cusp of tooth) AnnotationAssertion(Annotation( "PHENOSCAPE:alex") "A medially (towards the tongue)) raised feature found on crown of a tooth.") AnnotationAssertion( "UBERONTEMP:0ea3066e-0c22-417b-8ac4-91c2aacba792") AnnotationAssertion( ) AnnotationAssertion( "FMA:56490") AnnotationAssertion( "UBERONTEMP:0ea3066e-0c22-417b-8ac4-91c2aacba792") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) Annotation( ) "cuspis lingualis") AnnotationAssertion(Annotation( "FMA:56490") "lingual cusp") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0016929") AnnotationAssertion(rdfs:label "lingual cusp of tooth") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (ridge of tooth) AnnotationAssertion(Annotation( ) "A linear flat evelation on a tooth.") AnnotationAssertion( ) AnnotationAssertion( "crista of tooth") AnnotationAssertion( "tooth ridge") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0016930") AnnotationAssertion(rdfs:label "ridge of tooth") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (transverse ridge of tooth) AnnotationAssertion(Annotation( "PHENOSCAPE:curators"^^xsd:string) "Triangular ridges facing each other and crossing at transverse angle, forming a transverse ridge on posterior teeth.") AnnotationAssertion( "UBERONTEMP:12cd474b-52d2-46e2-9a3d-2322edc3490b") AnnotationAssertion( "FMA:56658") AnnotationAssertion(Annotation( "FMA:56658") "crista transversalis (corona dentis)") AnnotationAssertion(Annotation( "FMA:56658") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "crista transversalis dentis") AnnotationAssertion(Annotation( "FMA:56658") "crista transversalis of tooth") AnnotationAssertion(Annotation( "FMA:56658") "transverse ridge of crown of tooth") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0016931") AnnotationAssertion(rdfs:label "transverse ridge of tooth") SubClassOf( ) # Class: (triangular ridge of tooth) AnnotationAssertion( "FMA:56659") AnnotationAssertion(Annotation( "FMA:56659") "crista triangularis (corona dentis)") AnnotationAssertion(Annotation( "FMA:56659") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "crista triangularis dentis") AnnotationAssertion(Annotation( "FMA:56659") "crista triangularis of tooth") AnnotationAssertion(Annotation( "FMA:56659") "triangular ridge of crown of tooth") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0016932") AnnotationAssertion(rdfs:label "triangular ridge of tooth") SubClassOf( ) # Class: (oblique ridge of tooth) AnnotationAssertion( ) AnnotationAssertion( "FMA:56660") AnnotationAssertion(Annotation( "FMA:56660") "crista obliqua (corona dentis)") AnnotationAssertion(Annotation( "FMA:56660") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "crista obliqua dentis") AnnotationAssertion(Annotation( "FMA:56660") "oblique ridge of crown of tooth") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0016933") AnnotationAssertion(rdfs:label "oblique ridge of tooth") SubClassOf( ) # Class: (marginal ridge of tooth) AnnotationAssertion( ) AnnotationAssertion( "FMA:56758") AnnotationAssertion(Annotation( "FMA:56758") "crista marginalis (dentis)") AnnotationAssertion(Annotation( "FMA:56758") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "crista marginalis dentis") AnnotationAssertion(Annotation( "FMA:56758") "crista marginalis of tooth") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0016934") AnnotationAssertion(rdfs:label "marginal ridge of tooth") SubClassOf( ) # Class: (transverse marginal ridge of tooth) AnnotationAssertion( ) AnnotationAssertion( "transverse marginal ridge of tooth") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0016937") AnnotationAssertion(rdfs:label "transverse marginal ridge of tooth") SubClassOf( ) # Class: (mesial marginal ridge of tooth) AnnotationAssertion( ) AnnotationAssertion( "mesial marginal ridge of tooth") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0016938") AnnotationAssertion(rdfs:label "mesial marginal ridge of tooth") SubClassOf( ) # Class: (distal marginal ridge of tooth) AnnotationAssertion( ) AnnotationAssertion( "distal marginal ridge of tooth") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0016939") AnnotationAssertion(rdfs:label "distal marginal ridge of tooth") SubClassOf( ) # Class: (rostral margin of orbit) AnnotationAssertion( "BSPOTEMP:58938a8e-359c-49d8-b3f7-5e1fd7e1a109") AnnotationAssertion( "http://purl.bioontology.org/ontology/provisional/58938a8e-359c-49d8-b3f7-5e1fd7e1a109") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0016942") AnnotationAssertion(rdfs:label "rostral margin of orbit") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lower premolar tooth) AnnotationAssertion( "UBERON:4200143") AnnotationAssertion(Annotation( ) "LP") AnnotationAssertion( "lower premolar tooth") AnnotationAssertion( "mandibular premolar tooth") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0016943") AnnotationAssertion(rdfs:label "lower premolar tooth") SubClassOf( ) SubClassOf( ) # Class: (upper premolar tooth) AnnotationAssertion( "UBERON:4200144") AnnotationAssertion(Annotation( ) "UP") AnnotationAssertion( "maxillary premolar tooth") AnnotationAssertion( "upper premolar tooth") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0016944") AnnotationAssertion(rdfs:label "upper premolar tooth") SubClassOf( ) SubClassOf( ) # Class: (flexor cruris lateralis pars accessoria muscle) AnnotationAssertion( "UBERONTEMP:0238a879-c73c-4c7a-953b-9f5cda48db02") AnnotationAssertion( "M. flexor cruris lateralis pars accessoria") AnnotationAssertion( "pars accessoria of M. flexor cruris lateralis") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0017102") AnnotationAssertion(rdfs:label "flexor cruris lateralis pars accessoria muscle") SubClassOf( ) # Class: (flexor cruris lateralis muscle) AnnotationAssertion( "UBERONTEMP:367dba08-73f2-4ae2-8b00-bd7087482a2d") AnnotationAssertion( "M. flexor cruris lateralis") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0017156") AnnotationAssertion(rdfs:label "flexor cruris lateralis muscle") SubClassOf(Annotation( "UBERONTEMP") ) SubClassOf( ) # Class: (exoccipital-atlas joint) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A synovial joint that connects a vertebral bone 1 and connects a exoccipital bone.") AnnotationAssertion( "UBERONTEMP:372c02ad-f2bd-4cf8-b55c-9b686c3d62f4") AnnotationAssertion(Annotation( "UBERONTEMP:372c02ad-f2bd-4cf8-b55c-9b686c3d62f4") "atlanto-exoccipital joint") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0017157") AnnotationAssertion(rdfs:label "exoccipital-atlas joint") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (skin bony tubercle) AnnotationAssertion(Annotation( "PHENOSCAPE:Nizar") "A bony structure embedded in skin, roughly equivalent to osteoderms.") AnnotationAssertion( "http://purl.bioontology.org/ontology/provisional/3b77fb04-1e62-43af-a84b-5d5eb7388525") AnnotationAssertion( "http://purl.bioontology.org/ontology/provisional/bdc28b9d-8fe6-4175-ae67-002f61493279") AnnotationAssertion( "bony tubercle") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "UBERONTEMP:3b77fb04-1e62-43af-a84b-5d5eb7388525") Annotation( ) "bony tubercles") AnnotationAssertion( "UBERON:0017163") AnnotationAssertion(rdfs:label "skin bony tubercle") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (incisive process of premaxilla) AnnotationAssertion(Annotation( "PHENOSCAPE:alex") "A small protuberence on the lingual surface of the premaxilla, immediately posterior to the teeth.") AnnotationAssertion( "in Squamates") AnnotationAssertion( "http://purl.bioontology.org/ontology/provisional/2018775c-cd54-4503-88bc-9b62d35a1fdb") AnnotationAssertion( "http://purl.bioontology.org/ontology/provisional/b0379d68-e54b-4dac-851c-0336cfb85a8f") AnnotationAssertion( "http://purl.bioontology.org/ontology/provisional/b247b724-0e9c-44bd-bbd2-b84e6cb5b072") AnnotationAssertion( "http://purl.bioontology.org/ontology/provisional/f17c9aff-4a92-418e-989f-b8e9dd62caf6") AnnotationAssertion( "UBERONTEMP:b0379d68-e54b-4dac-851c-0336cfb85a8f") AnnotationAssertion( "uberon") AnnotationAssertion( "incisive bone") AnnotationAssertion( "incisive process") AnnotationAssertion( "UBERON:0017249") AnnotationAssertion(rdfs:label "incisive process of premaxilla") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (intertarsal sesamoid) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A sesamoid element that is part of a tarsal skeleton.") AnnotationAssertion( "http://purl.bioontology.org/ontology/provisional/c97fd8d8-cf3e-4326-938d-bea58477423d") AnnotationAssertion( "uberon") AnnotationAssertion( "tarsal sesamoid") AnnotationAssertion( "UBERON:0017261") AnnotationAssertion(rdfs:label "intertarsal sesamoid") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (primary premolar tooth) AnnotationAssertion( ) AnnotationAssertion( "deciduous premolar tooth") AnnotationAssertion( "primary premolar") AnnotationAssertion( "uberon") AnnotationAssertion( "primary bicuspid") AnnotationAssertion( "UBERON:0017269") AnnotationAssertion(rdfs:label "primary premolar tooth") SubClassOf( ) SubClassOf( ) # Class: (secondary premolar tooth) AnnotationAssertion( ) AnnotationAssertion( "permanent premolar tooth") AnnotationAssertion( "secondary premolar") AnnotationAssertion( "uberon") AnnotationAssertion( "secondary bicuspid") AnnotationAssertion( "UBERON:0017270") AnnotationAssertion(rdfs:label "secondary premolar tooth") SubClassOf( ) SubClassOf( ) # Class: (upper primary premolar tooth) AnnotationAssertion( "maxillary primary premolar tooth") AnnotationAssertion( "upper deciduous premolar tooth") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0017271") AnnotationAssertion(rdfs:label "upper primary premolar tooth") SubClassOf( ) SubClassOf( ) SubClassOf( ) # Class: (lower primary premolar tooth) AnnotationAssertion( "lower deciduous premolar tooth") AnnotationAssertion( "mandibular primary premolar tooth") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0017272") AnnotationAssertion(rdfs:label "lower primary premolar tooth") SubClassOf( ) SubClassOf( ) SubClassOf( ) # Class: (cingulum of tooth) AnnotationAssertion(Annotation( ) "The portion of the teeth, occurring on the lingual or palatal aspects, that forms a convex protuberance at the cervical third of the anatomic crown. It represents the lingual or palatal developmental lobe of these teeth.") AnnotationAssertion( "FMA has no definition but places this generically with upper, lower, canine, incisor subclasses. Wiktionary states cingulum is lower jaw molar only, and cingulid is upper molar only") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:56731") AnnotationAssertion(Annotation( "FMA:56731") "cingulum (dentis)") AnnotationAssertion(Annotation( "FMA:56731") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "cingulum dentis") AnnotationAssertion(Annotation( "FMA:56731") "tooth cingulum") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0017295") AnnotationAssertion(rdfs:label "cingulum of tooth") SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (cingulum of incisor tooth) AnnotationAssertion( "FMA:56733") AnnotationAssertion(Annotation( "FMA:56733") "incisor tooth cingulum") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0017296") AnnotationAssertion(rdfs:label "cingulum of incisor tooth") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (cingulum of canine tooth) AnnotationAssertion( "FMA:56734") AnnotationAssertion(Annotation( "FMA:56734") "canine tooth cingulum") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0017297") AnnotationAssertion(rdfs:label "cingulum of canine tooth") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (cingulum of upper incisor tooth) AnnotationAssertion( "FMA:56736") AnnotationAssertion(Annotation( "FMA:56736") "cingulum of maxillary incisor tooth") AnnotationAssertion(Annotation( "FMA:56736") "upper incisor tooth cingulum") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0017298") AnnotationAssertion(rdfs:label "cingulum of upper incisor tooth") SubClassOf( ) SubClassOf( ) # Class: (cingulum of lower incisor tooth) AnnotationAssertion( "FMA:56737") AnnotationAssertion(Annotation( "FMA:56737") "cingulum of mandibular incisor tooth") AnnotationAssertion(Annotation( "FMA:56737") "lower incisor tooth cingulum") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0017299") AnnotationAssertion(rdfs:label "cingulum of lower incisor tooth") SubClassOf( ) SubClassOf( ) # Class: (cingulum of upper canine tooth) AnnotationAssertion( "FMA:56752") AnnotationAssertion(Annotation( "FMA:56752") "cingulum of maxillary canine tooth") AnnotationAssertion(Annotation( "FMA:56752") "upper canine tooth cingulum") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0017312") AnnotationAssertion(rdfs:label "cingulum of upper canine tooth") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (cingulum of lower canine tooth) AnnotationAssertion( "FMA:56753") AnnotationAssertion(Annotation( "FMA:56753") "cingulum of mandibular canine tooth") AnnotationAssertion(Annotation( "FMA:56753") "lower canine tooth cingulum") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0017313") AnnotationAssertion(rdfs:label "cingulum of lower canine tooth") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (cingulum of lower jaw molar) AnnotationAssertion(Annotation( ) "A ridge that girdles the base of a lower molar tooth.") AnnotationAssertion( "cingulid") AnnotationAssertion( "cingulid of molar tooth") AnnotationAssertion( "uberon") AnnotationAssertion( "tooth cingulid") AnnotationAssertion( "UBERON:0017612") AnnotationAssertion(rdfs:label "cingulum of lower jaw molar") SubClassOf( ) SubClassOf( ) # Class: (cingulum of upper jaw molar) AnnotationAssertion(Annotation( ) "A ridge that girdles the base of a upper molar tooth.") AnnotationAssertion( "cingulum") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0017613") AnnotationAssertion(rdfs:label "cingulum of upper jaw molar") SubClassOf( ) SubClassOf( ) # Class: (cingulum of molar tooth) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0017614") AnnotationAssertion(rdfs:label "cingulum of molar tooth") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (vomerine dentition) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A set of teeth in which each tooth that attaches to a vomer.") AnnotationAssertion( "AAO:0000635") AnnotationAssertion( "uberon") AnnotationAssertion( "vomerine teeth") AnnotationAssertion( "UBERON:0017615") AnnotationAssertion(rdfs:label "vomerine dentition") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (extensor pollicis brevis muscle) AnnotationAssertion(Annotation( ) "The Extensor pollicis brevis lies on the medial side of, and is closely connected with, the Abductor pollicis longus.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:36195") AnnotationAssertion( "FMA:38518") AnnotationAssertion(Annotation( "FMA:38518") "extensor pollicis brevis") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "extensor pollicis") AnnotationAssertion( "UBERON:0017618") AnnotationAssertion(rdfs:label "extensor pollicis brevis muscle") SubClassOf(Annotation( "UBERONTEMP") ) # Class: (transverse folds of rectum) AnnotationAssertion(Annotation( ) "Houston's valves (or transverse folds of rectum) are semi-lunar transverse folds of the rectal wall that protrude into the anal canal. Their use seems to be to support the weight of fecal matter, and prevent its urging toward the anus, which would produce a strong urge to defecate. Although the term rectum means straight, these transverse folds overlap each other during the empty state of the intestine to such an extent that, as Houston remarked, they require considerable maneuvering to conduct an instrument along the canal, as often occurs in sigmoidoscopy and colonoscopy. These folds are about 12 mm. in width and are composed of the circular muscle coat of the rectum. They are usually three in number; sometimes a fourth is found, and occasionally only two are present. One is situated near the commencement of the rectum, on the right side. A second extends inward from the left side of the tube, opposite the middle of the sacrum. A third, the largest and most constant, projects backward from the forepart of the rectum, opposite the fundus of the urinary bladder. When a fourth is present, it is situated nearly 2.5 cm above the anus on the left and posterior wall of the tube.") AnnotationAssertion( ) AnnotationAssertion( "FMA:75657") AnnotationAssertion(Annotation( "FMA:75657") "Houston's valve (middle of three)") AnnotationAssertion(Annotation( "FMA:75657") "Kohlrausch's fold (middle of three)") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) Annotation( ) "plicae transversae recti") AnnotationAssertion(Annotation( "FMA:75657") "set of transverse folds of rectum") AnnotationAssertion(Annotation( "FMA:75657") "transverse folds of rectum") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "Houston's valve") AnnotationAssertion(Annotation( ) "Houston's valves") AnnotationAssertion(Annotation( ) "transverse folds of rectum") AnnotationAssertion( "UBERON:0017626") AnnotationAssertion(rdfs:label "transverse folds of rectum") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (rectal valve) AnnotationAssertion(Annotation( ) "A thin diaphragm located in the posterior fifth of the intestine of some Centrolophidae, e.g. Seriolella punctata, Schedophilus huttoni and Psenes pellucidus, or in others a sphincter-like constriction, e.g. Seriolella brama. A deep purple fluid was confined to the valve in S. punctata, but was found throughout the intestine in the other two species referred to. The fluid might be used to void a coloured cloud to distract or deter a predator.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0017627") AnnotationAssertion(rdfs:label "rectal valve") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (calcified structure of brain) AnnotationAssertion( ) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0017631") AnnotationAssertion(rdfs:label "calcified structure of brain") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pineal corpora arenacea) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A calcified structure of brain that is part of a pineal body.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0017632") AnnotationAssertion(rdfs:label "pineal corpora arenacea") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (choroid plexus corpora arenacea) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A calcified structure of brain that is part of a choroid plexus.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0017633") AnnotationAssertion(rdfs:label "choroid plexus corpora arenacea") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (paired venous dural sinus) AnnotationAssertion( "FMA:52568") AnnotationAssertion(Annotation( "FMA:52568") "paired dural venous sinus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0017635") AnnotationAssertion(rdfs:label "paired venous dural sinus") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses( ) # Class: (marginal venous sinus) AnnotationAssertion(Annotation( ) "A paired dural venous sinus at the rim of the foramen magnum.") AnnotationAssertion( "EHDAA2:0001064") AnnotationAssertion( "EHDAA:8693") AnnotationAssertion( "FMA:50766") AnnotationAssertion( "intracranial marginal sinus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:50766") "marginal sinus") AnnotationAssertion( "UBERON:0017637") AnnotationAssertion(rdfs:label "marginal venous sinus") SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (primitive marginal sinus) AnnotationAssertion(Annotation( ) "The primitive marginal sinuses (PMS) are embryonic sinuses forming the later superior sagittal sinus.") AnnotationAssertion( "EHDAA2:0001514") AnnotationAssertion( "uberon") AnnotationAssertion( "marginal sinus") AnnotationAssertion( "UBERON:0017638") AnnotationAssertion(rdfs:label "primitive marginal sinus") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (sinus of von Szily) AnnotationAssertion(Annotation( ) Annotation( ) "A circular gap in the iris near the pupil between the layers of the optic cup (von Szily, 1902).") AnnotationAssertion( "In humans, present in month 3-7 pc.") AnnotationAssertion( ) AnnotationAssertion( "marginal sinus (v. Szily)") AnnotationAssertion( "marginal sinus of von Szily") AnnotationAssertion( "uberon") AnnotationAssertion( "marginal sinus") AnnotationAssertion( "UBERON:0017639") AnnotationAssertion(rdfs:label "sinus of von Szily") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (unpaired venous dural sinus) AnnotationAssertion( "FMA:52569") AnnotationAssertion(Annotation( "FMA:52569") "unpaired dural venous sinus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0017640") AnnotationAssertion(rdfs:label "unpaired venous dural sinus") SubClassOf( ) # Class: (meningeal branch of spinal nerve) AnnotationAssertion(Annotation( ) Annotation( ) "Branch of spinal nerve that innervates the structures of the vertebral column.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:5988") AnnotationAssertion(Annotation( "FMA:5988") "ramus meningeus nervorum spinales") AnnotationAssertion(Annotation( "FMA:5988") "recurrent meningeal branch of spinal nerve") AnnotationAssertion(Annotation( "FMA:5988") "sinuvertebral branch of spinal nerve") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:5988") "sinuvertebral nerve") AnnotationAssertion( "UBERON:0017641") AnnotationAssertion(rdfs:label "meningeal branch of spinal nerve") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (communicating branch of spinal nerve) AnnotationAssertion(Annotation( ) "Rami communicans (plural rami communicantes) is the term used for a nerve which connects two other nerves. When used without further definition, it almost always refers to a communicating branch between a spinal nerve and the sympathetic trunk. More specifically, it usually refers to one of the following: Gray ramus communicans White ramus communicans.") AnnotationAssertion(Annotation( ) "rami communicantes") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:5874") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "rami communicantes of spinal nerve") AnnotationAssertion( "UBERON:0017642") AnnotationAssertion(rdfs:label "communicating branch of spinal nerve") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (external thoracic vein) AnnotationAssertion(Annotation( "ISBM13:978-0226870137") "Extension of the long thoracic vein that collects blood from the mammary glands.") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37145") AnnotationAssertion( "MA:0002236") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "ISBM13:978-0226870137") "external mammary vein") AnnotationAssertion( "UBERON:0017643") AnnotationAssertion(rdfs:label "external thoracic vein") SubClassOf(Annotation( "MA"^^xsd:string) ) # Class: (internal mammary vein) AnnotationAssertion(Annotation( "ncithesaurus:Internal_Mammary_Vein") "One of two veins running parallel to their corresponding internal mammary arteries that unite forming one vessel. These veins drain the chest wall into the innominate vein.") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37159") AnnotationAssertion( "MA:0002148") AnnotationAssertion( "NCIT:C32854") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0017646") AnnotationAssertion(rdfs:label "internal mammary vein") SubClassOf(Annotation( "ncithesaurus"^^xsd:string) ) # Class: (prevertebral muscle of neck) AnnotationAssertion(Annotation( ) "A prevertebral muscle that is part of a neck.") AnnotationAssertion( "EMAPA:25130") AnnotationAssertion( "MA:0003144") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0017647") AnnotationAssertion(rdfs:label "prevertebral muscle of neck") SubClassOf( ) SubClassOf( ) # Class: (ventral body wall) AnnotationAssertion(Annotation( ) "The ventral part of the body wall.") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37984") AnnotationAssertion( "FMA:86934") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:86934") "anterior body wall") AnnotationAssertion( "UBERON:0017648") AnnotationAssertion(rdfs:label "ventral body wall") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (dorsal body wall) AnnotationAssertion(Annotation( ) "The dorsal part of the body wall.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0017649") AnnotationAssertion(rdfs:label "dorsal body wall") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (developing mesenchymal structure) AnnotationAssertion(Annotation( "AEO:0001016") Annotation( "AEO:JB"^^xsd:string) "A mesenchyme-derived anatomical entity undergoing a transtion to become another structure.") AnnotationAssertion( "AEO:0001016") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0017650") AnnotationAssertion(rdfs:label "developing mesenchymal structure") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (salivary gland primordium) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A primordium that has the potential to develop into a saliva-secreting gland.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0017651") AnnotationAssertion(rdfs:label "salivary gland primordium") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (intermaxillary gland (sensu Osteolepiformes)) AnnotationAssertion(Annotation( ) "A gland lodged in a fossa formed mainly of dermal bones, situated wholly in front of the nasal capsules of Osteolepiformes.") AnnotationAssertion( "intermaxillary gland") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0017652") AnnotationAssertion(rdfs:label "intermaxillary gland (sensu Osteolepiformes)") SubClassOf( ) # Class: (buccal gland) AnnotationAssertion(Annotation( ) "Any of the small racemose mucous glands in the mucous membrane lining the cheeks.") AnnotationAssertion( ) AnnotationAssertion( "BTO:0005767") AnnotationAssertion( "uberon") AnnotationAssertion( "cheek gland") AnnotationAssertion( "UBERON:0017654") AnnotationAssertion(rdfs:label "buccal gland") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (ventral surface of penis) AnnotationAssertion( "FMA:19624") AnnotationAssertion(Annotation( "FMA:19624") "urethral surface of penis") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0017659") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "ventral surface of penis") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (bony part of cervical vertebral arch) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A bony part of vertebral arch that is part of a cervical vertebral arch.") AnnotationAssertion( "FMA:29794") AnnotationAssertion(Annotation( "FMA:29794") "bony part of arch of cervical vertebra") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0017670") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "bony part of cervical vertebral arch") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (bony part of vertebral arch of first sacral vertebra) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A bony part of vertebral arch that is part of a sacral vertebra 1.") AnnotationAssertion( "FMA:32395") AnnotationAssertion(Annotation( "FMA:32395") "bony part of vertebral arch of first sacral segment") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0017671") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "bony part of vertebral arch of first sacral vertebra") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (abdominal viscera) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A viscus that is part of a abdomen.") AnnotationAssertion( "FMA:32413") AnnotationAssertion( "FMA:67355") AnnotationAssertion(Annotation( "FMA:32413") "abdominal viscera") AnnotationAssertion(Annotation( "FMA:32413") "abdominal viscera set") AnnotationAssertion(Annotation( "FMA:32413") "set of abdominal viscera") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0017672") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "abdominal viscera") SubClassOf( ) SubClassOf( ) # Class: (internal surface of frontal bone) AnnotationAssertion( "FMA:52856") AnnotationAssertion(Annotation( "FMA:52856") "facies interna (os frontale)") AnnotationAssertion(Annotation( "FMA:52856") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "facies interna ossis frontalis") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0017690") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "internal surface of frontal bone") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (internal surface of cranial base) AnnotationAssertion(Annotation( ) "Internal (endosteal) surface of the base of skull.") AnnotationAssertion( "FMA:53128") AnnotationAssertion(Annotation( "FMA:53128") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "basis cranii interna") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0017692") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "internal surface of cranial base") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (thenar eminence) AnnotationAssertion(Annotation( ) "A raised fleshy area on the palm of the hand near the base of the thumb.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:61520") AnnotationAssertion(Annotation( "FMA:61520") "thenar part of palm") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0017716") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "thenar eminence") SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (hypothenar eminence) AnnotationAssertion(Annotation( ) "Hypothenar refers to a group of three muscles of the palm that control the motion of the little finger. The three muscles are: Abductor digiti minimi Flexor digiti minimi Opponens digiti minimi.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:61523") AnnotationAssertion(Annotation( "FMA:61523") "hypothenar part of palm") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0017717") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "hypothenar eminence") SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (raphe of scrotum) AnnotationAssertion(Annotation( "HPO:probinson") "A ridge of tissue that extends along the midline of the scrotum.") AnnotationAssertion( "The scrotal raphe is formed when the embryonic, urethral groove closes (week 12 in humans)") AnnotationAssertion( ) AnnotationAssertion( "FMA:75130") AnnotationAssertion(Annotation( "FMA:75130") "scrotal raphe") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0017732") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "raphe of scrotum") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lower primary incisor tooth) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A primary incisor tooth that is part of a lower jaw region.") AnnotationAssertion( ) AnnotationAssertion( "FMA:84215") AnnotationAssertion(Annotation( "FMA:84215") "lower deciduous incisor tooth") AnnotationAssertion( "primary lower incisor tooth") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:84215") "deciduous lower incisor tooth") AnnotationAssertion( "UBERON:0017748") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "lower primary incisor tooth") SubClassOf( ) SubClassOf( ) SubClassOf( ) # Class: (withers) AnnotationAssertion(Annotation( ) "The ridge between the shoulder blades of a four-legged mammal.") AnnotationAssertion( "The withers in horses are formed by the dorsal spinal processes of roughly the 3rd through 11th thoracic vertebrae (most horses have 18 thoracic vertebrae), which are unusually long in this area. The processes at the withers can be more than 12 inches (30 cm) long.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0017749") AnnotationAssertion(rdfs:label "withers") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (proximal mesopodial endochondral element) AnnotationAssertion(Annotation( ) "A mesopodial endochondral element that is in the most proximal part of the mesopodial skeleton, connected to the zeugopodial skeleton.") AnnotationAssertion( "awaiting approval by phenoscape curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0017750") AnnotationAssertion(rdfs:label "proximal mesopodial endochondral element") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (proximal mesopodial cartilage element) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A proximal mesopodial endochondral element that is composed primarily of cartilage tissue.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0017751") AnnotationAssertion(rdfs:label "proximal mesopodial cartilage element") SubClassOf( ) SubClassOf( ) # Class: (distal mesopodial endochondral element) AnnotationAssertion(Annotation( ) "An endochondral element in the distal portion of the mesopodial skeleton, between the central mesopodial skeleton and the metapodial skeleton.") AnnotationAssertion( "TODO add logical definition") AnnotationAssertion(Annotation( "UBERON:cjm"^^xsd:string) Annotation( ) "distal mesopodial") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0018099") AnnotationAssertion(rdfs:label "distal mesopodial endochondral element") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (distal mesopodial cartilage element) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A distal mesopodial endochondral element that is composed primarily of cartilage tissue.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0018100") AnnotationAssertion(rdfs:label "distal mesopodial cartilage element") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (distal mesopodial pre-cartilage condensation) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A distal mesopodial endochondral element that is composed primarily of a pre-cartilage condensation.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0018101") AnnotationAssertion(rdfs:label "distal mesopodial pre-cartilage condensation") SubClassOf( ) SubClassOf( ) # Class: (distal mesopodial bone) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A distal mesopodial endochondral element that is composed primarily of a bone tissue.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0018102") AnnotationAssertion(rdfs:label "distal mesopodial bone") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (posterior fascicle of palatopharyngeus) AnnotationAssertion(Annotation( ) "The thinner portion of the muscle of the palatopharyngeal arch, originating in the region of the midline where its fibers interdigitate with the contralateral partner, then passing posterior to the levator veli palatini muscle to join the longitudinal layer of pharyngeal musculature; acts as a sort of sphincter, reducing the caliber of the isthmus of fauces at the palatopharyngeal arch.") AnnotationAssertion( ) AnnotationAssertion( "FMA:46684") AnnotationAssertion(Annotation( "FMA:46684") "fasciculus posterior (musculus palatopharyngeus)") AnnotationAssertion(Annotation( "FMA:46684") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "fasciculus posterior musculus palatopharyngei") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) "musculus sphincter palatopharyngeus") AnnotationAssertion(Annotation( "FMA:46684") "palatopharyngeal sphincter") AnnotationAssertion(Annotation( ) "velopharyngeal sphincter") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0018103") AnnotationAssertion(rdfs:label "posterior fascicle of palatopharyngeus") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (parafoveal part of retina) AnnotationAssertion(Annotation( ) "The intermediate belt surrounding the fovea centralis.") AnnotationAssertion( "ganglion cell layer is composed of more than five rows of cells, as well as the highest density of cones") AnnotationAssertion( ) AnnotationAssertion( "uberon") AnnotationAssertion( "parafoveal belt") AnnotationAssertion( "parafoveal retina") AnnotationAssertion( "UBERON:0018104") AnnotationAssertion(rdfs:label "parafoveal part of retina") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (perifoveal part of retina) AnnotationAssertion(Annotation( ) "The outermost region surrounding the fovea centralis.") AnnotationAssertion( "the ganglion cell layer contains two to four rows of cells") AnnotationAssertion( ) AnnotationAssertion( "uberon") AnnotationAssertion( "perifoveal belt") AnnotationAssertion( "perifoveal retina") AnnotationAssertion( "UBERON:0018105") AnnotationAssertion(rdfs:label "perifoveal part of retina") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (foveola of retina) AnnotationAssertion(Annotation( ) "A region of the fovea centralis that lies in the center of the fovea and contains only cone cells, and a cone-shaped zone of Müller cells.") AnnotationAssertion( "in humans is approximately 0.35 mm in diameter") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "uberon") AnnotationAssertion( "foveola") AnnotationAssertion( "UBERON:0018107") AnnotationAssertion(rdfs:label "foveola of retina") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (superior auricular muscle) AnnotationAssertion(Annotation( ) "The superior auricular muscle, the largest of the three auriculares muscles, is also thin and fan-shaped. Its fibers arise from the galea aponeurotica, and converge to be inserted by a thin, flattened tendon into the upper part of the cranial surface of the auricula.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:46855") AnnotationAssertion(Annotation( "FMA:46855") "auricularis superior") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0018108") AnnotationAssertion(rdfs:label "superior auricular muscle") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (anterior auricular muscle) AnnotationAssertion(Annotation( ) "The anterior auricular muscle, the smallest of the three auriculares muscles, is thin and fan-shaped, and its fibers are pale and indistinct. It arises from the lateral edge of the galea aponeurotica, and its fibers converge to be inserted into a projection on the front of the helix.") AnnotationAssertion( ) AnnotationAssertion( "FMA:46856") AnnotationAssertion(Annotation( "FMA:46856") "auricularis anterior") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0018109") AnnotationAssertion(rdfs:label "anterior auricular muscle") SubClassOf(Annotation( "FMA"^^xsd:string) ) DisjointClasses(Annotation( "lexical"^^xsd:string) ) # Class: (posterior auricular muscle) AnnotationAssertion(Annotation( ) "The posterior auricular muscle consists of two or three fleshy fasciculi, which arise from the mastoid portion of the temporal bone by short aponeurotic fibers. They are inserted into the lower part of the cranial surface of the concha.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:46857") AnnotationAssertion(Annotation( "FMA:46857") "auricularis posterior") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "post auricular muscle") AnnotationAssertion(Annotation( ) "post-auricular muscle") AnnotationAssertion( "UBERON:0018110") AnnotationAssertion(rdfs:label "posterior auricular muscle") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (muscle layer of rectum) AnnotationAssertion(Annotation( ) "A muscle layer that is part of the rectum.") AnnotationAssertion( "FMA:15035") AnnotationAssertion(Annotation( "FMA:15035") "muscular coat of rectum") AnnotationAssertion(Annotation( "FMA:15035") "muscularis externa of rectum") AnnotationAssertion(Annotation( "FMA:15035") "rectal muscularis propria") AnnotationAssertion(Annotation( "FMA:15035") "tunica muscularis (rectum)") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) "tunica muscularis recti") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0018111") AnnotationAssertion(rdfs:label "muscle layer of rectum") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (rectum smooth muscle tissue) AnnotationAssertion(Annotation( ) "Any portion of smooth muscle tissue that is part of the rectum.") AnnotationAssertion( "rectal smooth muscle tissue") AnnotationAssertion( "rectum smooth muscle") AnnotationAssertion( "smooth muscle of rectum") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0018112") AnnotationAssertion(rdfs:label "rectum smooth muscle tissue") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (left kidney interstitium) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A kidney interstitium that is part of a left kidney.") AnnotationAssertion( "FMA:74271") AnnotationAssertion(Annotation( "FMA:74271") "left renal stroma") AnnotationAssertion(Annotation( "FMA:74271") "stroma of left kidney") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0018113") AnnotationAssertion(rdfs:label "left kidney interstitium") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (right kidney interstitium) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A kidney interstitium that is part of a right kidney.") AnnotationAssertion( "FMA:74270") AnnotationAssertion(Annotation( "FMA:74270") "right renal stroma") AnnotationAssertion(Annotation( "FMA:74270") "stroma of right kidney") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0018114") AnnotationAssertion(rdfs:label "right kidney interstitium") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (left renal pelvis) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A renal pelvis that is part of a left ureter.") AnnotationAssertion( ) AnnotationAssertion( "FMA:15579") AnnotationAssertion(Annotation( "FMA:15579") "pelvis of left ureter") AnnotationAssertion(Annotation( "FMA:15579") "renal pelvis of left kidney") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0018115") AnnotationAssertion(rdfs:label "left renal pelvis") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (right renal pelvis) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A renal pelvis that is part of a right ureter.") AnnotationAssertion( ) AnnotationAssertion( "FMA:15578") AnnotationAssertion(Annotation( "FMA:15578") "pelvis of right kidney") AnnotationAssertion(Annotation( "FMA:15578") "pelvis of right ureter") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0018116") AnnotationAssertion(rdfs:label "right renal pelvis") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (left renal cortex interstitium) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A renal cortex interstitium that is part of a left kidney.") AnnotationAssertion( "cortical interstitial tissue of left kidney") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0018117") AnnotationAssertion(rdfs:label "left renal cortex interstitium") SubClassOf( ) SubClassOf( ) # Class: (right renal cortex interstitium) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A renal cortex interstitium that is part of a right kidney.") AnnotationAssertion( "cortical interstitial tissue of right kidney") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0018118") AnnotationAssertion(rdfs:label "right renal cortex interstitium") SubClassOf( ) SubClassOf( ) # Class: (left renal medulla interstitium) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A renal medulla interstitium that is part of a left kidney.") AnnotationAssertion( "medullary interstitial tissue of left kidney") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0018119") AnnotationAssertion(rdfs:label "left renal medulla interstitium") SubClassOf( ) SubClassOf( ) # Class: (right renal medulla interstitium) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A renal medulla interstitium that is part of a right kidney.") AnnotationAssertion( "medullary interstitial tissue of right kidney") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0018120") AnnotationAssertion(rdfs:label "right renal medulla interstitium") SubClassOf( ) SubClassOf( ) # Class: (periovarian fat pad) AnnotationAssertion(Annotation( ) "The encapsulated adipose tissue associated with the ovaries.") AnnotationAssertion( "MA:0003064") AnnotationAssertion( "periovarian fat depot") AnnotationAssertion( "uberon") AnnotationAssertion( "ovarian fat pad") AnnotationAssertion( "UBERON:0018131") AnnotationAssertion(rdfs:label "periovarian fat pad") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (rugal fold of scrotum) AnnotationAssertion(Annotation( ) "A folded ridge of skin that is part of a scrotum superficial to the dartos muscle.") AnnotationAssertion(Annotation( ) "folded ridge of skin of scrotum") AnnotationAssertion(Annotation( ) "scrotal rugae") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0018134") AnnotationAssertion(rdfs:label "rugal fold of scrotum") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (fibrocollagenous connective tissue) AnnotationAssertion( "FMA:83521") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0018135") AnnotationAssertion(rdfs:label "fibrocollagenous connective tissue") SubClassOf( ) # Class: (maxillary fenestra) AnnotationAssertion(Annotation( ) "A fenestra or hole which pierces the maxilla anterior to the antorbital fenestra.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0018136") AnnotationAssertion(rdfs:label "maxillary fenestra") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (premaxillary fenestra) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A fenestra that is part of a premaxilla.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0018137") AnnotationAssertion(rdfs:label "premaxillary fenestra") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (mammary lobe) AnnotationAssertion(Annotation( ) "A cluster of mammary gland lobules. In humans this is a distinct lobe and located in the breast region.") AnnotationAssertion( "The FMA class 'lactiferous gland' may be equivalent to this") AnnotationAssertion( ) AnnotationAssertion( "BTO:0004718") AnnotationAssertion( "NCIT:C93232") AnnotationAssertion(Annotation( "BTO:0004718") Annotation( "NCBITaxon:9606"^^xsd:string) Annotation( ) "breast lobe") AnnotationAssertion(Annotation( "BTO:0004718") Annotation( "NCBITaxon:9606"^^xsd:string) Annotation( ) "lobe of breast") AnnotationAssertion(Annotation( "BTO:0004718") Annotation( "NCBITaxon:9606"^^xsd:string) Annotation( ) "lobe of mammary gland") AnnotationAssertion(Annotation( "BTO:0004718") Annotation( "NCBITaxon:9606"^^xsd:string) Annotation( ) "lobi glandulae mammariae") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0004718") Annotation( ) "lobus glandulae mammariae") AnnotationAssertion( "UBERON:0018140") AnnotationAssertion(rdfs:label "mammary lobe") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (anterior perforated substance) AnnotationAssertion(Annotation( "BIRNLEX:1096") "Regional part of telencephalon lying on the basal surface and bounded by the olfactory trigone rostrally, the diagonal band medially and caudally and the prepiriform cortex laterally. It is characterized by many perforations caused by small blood vessels entering the gray matter (Meyer et al., J. Comp. Neurol 284: 405, 1989).") AnnotationAssertion(Annotation( "FMA:61891") "Subdivision of telencephalon which is a region on the ventro-medial aspect of the telencephalon penetrated by numerous blood vessels. It is bounded by the optic tract posteriorly and the olfactory trigone anteriorly.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:APS") AnnotationAssertion( "BIRNLEX:1096") AnnotationAssertion( "DHBA:10642") AnnotationAssertion( "FMA:61891") AnnotationAssertion(Annotation( "BIRNLEX:1096") "UMLS:C0162436") AnnotationAssertion(Annotation( "BIRNLEX:1096") "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=282") AnnotationAssertion(Annotation( "FMA:61891") "anterior perforated area") AnnotationAssertion(Annotation( "FMA:61891") "anterior perforated space") AnnotationAssertion(Annotation( "FMA:61891") "olfactory area (mai)") AnnotationAssertion(Annotation( ) Annotation( ) "substantia perforata anterior") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:282") Annotation( ) "area olfactoria (Mai)") AnnotationAssertion(Annotation( "NeuroNames:282") Annotation( ) "eminentia parolfactoria") AnnotationAssertion(Annotation( "NeuroNames:282") "olfactory area (Carpenter)") AnnotationAssertion(Annotation( "FMA:61891") Annotation( ) "olfactory tubercle") AnnotationAssertion(Annotation( "NeuroNames:282") "olfactory tubercle (Ganser)") AnnotationAssertion(Annotation( "NeuroNames:282") "rostral perforated substance") AnnotationAssertion(Annotation( "NeuroNames:282") Annotation( ) "tuber olfactorium") AnnotationAssertion( "UBERON:0018141") AnnotationAssertion(rdfs:label "anterior perforated substance") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (caudal vertebra endochondral element) AnnotationAssertion(Annotation( ) "Any vertebra endochondral element that is part of the caudal region of the vertebral column (tail or coccyx).") AnnotationAssertion( "UBERON:0015006") AnnotationAssertion( "caudal vertebra element") AnnotationAssertion( "tail vertebra element") AnnotationAssertion( "coccygeal vertebra element") AnnotationAssertion( "coccyx vertebra element") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0018142") AnnotationAssertion(rdfs:label "caudal vertebra endochondral element") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (transverse process of cervical vertebra) AnnotationAssertion(Annotation( ) "A transverse process that is part of a cervical vertebra.") AnnotationAssertion( "May be homologous with the cervical ribs of some vertebrates") AnnotationAssertion( ) AnnotationAssertion( "FMA:23894") AnnotationAssertion( "FMA:9913") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0018143") AnnotationAssertion(rdfs:label "transverse process of cervical vertebra") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (transverse process of lumbar vertebra) AnnotationAssertion(Annotation( ) "A transverse process that is part of a lumbar vertebra.") AnnotationAssertion( "May be homologous with the lumbar ribs of some vertebrates") AnnotationAssertion( ) AnnotationAssertion( "FMA:16080") AnnotationAssertion( "FMA:65469") AnnotationAssertion(Annotation( "FMA:65469") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "costa lumbalis") AnnotationAssertion(Annotation( "FMA:16080") "lumbar transverse process") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0018146") AnnotationAssertion(rdfs:label "transverse process of lumbar vertebra") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (angle of oral opening) AnnotationAssertion( ) AnnotationAssertion( "FMA:77269") AnnotationAssertion( "MFMO:0000145") AnnotationAssertion(Annotation( "FMA:77269") "angle of mouth") AnnotationAssertion(Annotation( "FMA:77269") "mouth angle") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0018149") AnnotationAssertion(rdfs:comment "Serves as attachment site for zygomaticus major muscle") AnnotationAssertion(rdfs:label "angle of oral opening") SubClassOf( ) SubClassOf(Annotation( "MFMO-modified") ObjectSomeValuesFrom( )) # Class: (skin of lower lip) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A zone of skin that is part of a lower lip.") AnnotationAssertion( ) AnnotationAssertion( "FMA:24767") AnnotationAssertion(Annotation( "FMA:24767") "lower lip skin") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0018150") AnnotationAssertion(rdfs:label "skin of lower lip") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (skin of upper lip) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A zone of skin that is part of a upper lip.") AnnotationAssertion( ) AnnotationAssertion( "FMA:24765") AnnotationAssertion(Annotation( "FMA:24765") "upper lip skin") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0018151") AnnotationAssertion(rdfs:label "skin of upper lip") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pars flaccida of tympanic membrane) AnnotationAssertion(Annotation( ) "A small, triangular, flaccid portion of the tympanic membrane, or eardrum, lying above the malleolar folds, attached directly to the petrous bone at the notch of Rivinus.") AnnotationAssertion(Annotation( ) "Size varies across mammals, with the sheep pars flaccida larger than the human") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:56721") AnnotationAssertion(Annotation( "FMA:56721") "Shrapnell's membrane") AnnotationAssertion(Annotation( "FMA:56721") Annotation( ) "pars flaccida (membrana tympanica)") AnnotationAssertion(Annotation( "FMA:56721") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "pars flaccida membranae tympanicae") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "flaccid part") AnnotationAssertion(Annotation( ) "pars flaccida") AnnotationAssertion( "UBERON:0018152") AnnotationAssertion(rdfs:label "pars flaccida of tympanic membrane") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (pars tensa of tympanic membrane) AnnotationAssertion( ) AnnotationAssertion( "FMA:56722") AnnotationAssertion(Annotation( "FMA:56722") "pars tensa (membrana tympanica)") AnnotationAssertion(Annotation( "FMA:56722") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "pars tensa membranae tympanicae") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0018153") AnnotationAssertion(rdfs:label "pars tensa of tympanic membrane") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (ligament of middle ear) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A ligament that is part of a middle ear.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0018154") AnnotationAssertion(rdfs:label "ligament of middle ear") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (posterior incudal ligament) AnnotationAssertion(Annotation( "ISBN:9781604061550") "A fold of mucous membrane that runs from the fossa incudus to the incus.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0018155") AnnotationAssertion(rdfs:label "posterior incudal ligament") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (malleal ligament) AnnotationAssertion(Annotation( "ISBN:9781604061550") "A skeletal ligament that attaches to the malleus.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0018156") AnnotationAssertion(rdfs:label "malleal ligament") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lateral malleal ligament) AnnotationAssertion(Annotation( "ISBN:9781604061550") "A malleal ligament that extends from the bony margin of the notch of Rivinus to the neck of the malleus.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0018157") AnnotationAssertion(rdfs:label "lateral malleal ligament") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (superior malleal ligament) AnnotationAssertion(Annotation( "ISBN:9781604061550") "A malleal ligament that extends from the tempen tympani to the head of the malleus.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0018158") AnnotationAssertion(rdfs:label "superior malleal ligament") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (anterior malleal ligament) AnnotationAssertion(Annotation( "ISBN:9781604061550") "A malleal ligament that extends from the anterior tympanic wall to the anterior process of the malleus.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0018159") AnnotationAssertion(rdfs:label "anterior malleal ligament") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (anterior process of malleus) AnnotationAssertion( ) AnnotationAssertion( "FMA:52771") AnnotationAssertion(Annotation( "FMA:52771") "folian process") AnnotationAssertion(Annotation( "FMA:52771") "processus anterior (malleus)") AnnotationAssertion(Annotation( "FMA:52771") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "processus anterior mallei") AnnotationAssertion(Annotation( "FMA:52771") "rau's process") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0018160") AnnotationAssertion(rdfs:label "anterior process of malleus") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (annular ligament of stapes) AnnotationAssertion(Annotation( ) "A ring of fibrous tissue that connects the base of the stapes to the oval window of the inner ear.") AnnotationAssertion(Annotation( ) "annular ligament") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:60884") AnnotationAssertion( "annular ligament of base of stapes") AnnotationAssertion(Annotation( ) "annular stapedial ligament") AnnotationAssertion(Annotation( ) Annotation( ) "ligamentum anulare stapedis") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0018161") AnnotationAssertion(rdfs:label "annular ligament of stapes") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pulmonary part of lymphatic system) AnnotationAssertion(Annotation( ) "An organ system subdivision that is the part of the lymphoid system that includes the pulmonary lymphatic vessels.") AnnotationAssertion( "FMA:67999") AnnotationAssertion(Annotation( "FMA:67999") "pulmonary lymphatic chain") AnnotationAssertion( "uberon") AnnotationAssertion( "pulmonary lymphatic vasculature") AnnotationAssertion( "UBERON:0018226") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "pulmonary part of lymphatic system") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pulmonary lymphatic vessel) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A lymphatic vessel that is part of a lung.") AnnotationAssertion( ) AnnotationAssertion( "FMA:234006") AnnotationAssertion( "lymphatic vessel of lung") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0018227") AnnotationAssertion(rdfs:label "pulmonary lymphatic vessel") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (extrahepatic branch of portal vein) AnnotationAssertion( ) AnnotationAssertion( "FMA:15418") AnnotationAssertion(Annotation( "FMA:15418") "extrahepatic part of portal vein") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0018228") AnnotationAssertion(rdfs:label "extrahepatic branch of portal vein") SubClassOf(Annotation( "MA"^^xsd:string) ) # Class: (renin-angiotensin system) AnnotationAssertion(Annotation( "MESH:G06.535.805") "A system consisting of renin, angiotensin-converting enzyme, and angiotensin II. Renin, an enzyme produced in the kidney, acts on angiotensinogen, an alpha-2 globulin produced by the liver, forming angiotensin I. The converting enzyme contained in the lung acts on angiotensin I in the plasma converting it to angiotensin II, the most powerful directly pressor substance known. It causes contraction of the arteriolar smooth muscle and has other indirect actions mediated through the adrenal cortex.") AnnotationAssertion( "may be replaced by a GO process in future") AnnotationAssertion( "FMA:74787") AnnotationAssertion( "MESH:G06.535.805") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "MESH:G06.535.805") "renin angiotensin aldosterone system") AnnotationAssertion(Annotation( "MESH:G06.535.805") "renin angiotensin system") AnnotationAssertion(Annotation( "MESH:G06.535.805") "renin-angiotensin system") AnnotationAssertion(Annotation( "MESH:G06.535.805") "renin-angiotensin-aldosterone system") AnnotationAssertion( "UBERON:0018229") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "renin-angiotensin system") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (femoral canal) AnnotationAssertion(Annotation( ) "The compartment of the femoral sheath that contains efferent lymphatic vessels and a lymph node embedded in a small amount of areolar tissue. It is conical in shape and is about 2 cm long. The femoral canal is bordered: Anteriorly by the inguinal ligament Posteriorly by the pectineal ligament Medially by the lacunar ligament Laterally by the femoral vein It contains the lymph nodes of Cloquet or Rosenmuller. It should not be confused with the nearby adductor canal.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:22405") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0018230") AnnotationAssertion(rdfs:label "femoral canal") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (labyrinthine artery) AnnotationAssertion(Annotation( ) "A long slender branch of the anterior inferior cerebellar artery (85%-100% cases) or basilar artery (<15% cases), arises from near the middle of the artery; it accompanies the vestibulocochlear nerve through the internal acoustic meatus, and is distributed to the internal ear.") AnnotationAssertion(Annotation( "FMA:50548") "artery of inner ear") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37093") AnnotationAssertion( "FMA:50548") AnnotationAssertion( "NCIT:C32834") AnnotationAssertion(Annotation( ) Annotation( ) "arteria auditiva interna") AnnotationAssertion(Annotation( ) Annotation( ) "arteria labyrinthi") AnnotationAssertion(Annotation( "FMA:50548") "internal auditory artery") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0018231") AnnotationAssertion(rdfs:label "labyrinthine artery") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (axillary sweat gland) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A sweat gland that is part of a axilla.") AnnotationAssertion(Annotation( "ISBN:0123813611"^^xsd:string) ) AnnotationAssertion(Annotation( ) "axillary apocrine sweat gland") AnnotationAssertion(Annotation( ) "sweat gland of axilla") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0018232") AnnotationAssertion(rdfs:label "axillary sweat gland") SubClassOf(Annotation( "ISBN:0123813611"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (gland of Zeis) AnnotationAssertion(Annotation( ) "Glands of Zeis are unilobar sebaceous glands located on the margin of the eyelid. The glands of Zeis service the eyelash. These glands produce an oily substance that is issued through the excretory ducts of the sebaceous lobule into the middle portion of the hair follicle.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:59191") AnnotationAssertion( "Zeis gland") AnnotationAssertion(Annotation( "FMA:59191") "ciliary sebaceous gland of eyelid") AnnotationAssertion( "gland of Zeis") AnnotationAssertion(Annotation( "FMA:59191") "gland of Zeiss") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0018233") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "gland of Zeis") SubClassOf( ) # Class: (stroma of pancreas) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A stroma that is part of a pancreas.") AnnotationAssertion( "FMA:63121") AnnotationAssertion(Annotation( "FMA:63121") "pancreatic stroma") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0018234") AnnotationAssertion(rdfs:label "stroma of pancreas") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (capsule of pancreas) AnnotationAssertion(Annotation( "ISBN:0123813611"^^xsd:string) "A capsule that divides the parenchyma of the pancreas into lobes and lobules.") AnnotationAssertion( "typically thin but can thicken with age") AnnotationAssertion( "pancreatic capsule") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0018235") AnnotationAssertion(rdfs:label "capsule of pancreas") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (nucleus of Bischoff) AnnotationAssertion(Annotation( ) "A midline nucleus of the dorsal motor column found in animals with a prominent tail, including alligator, some birds, kangaroo, rat, shrew, great anteater.") AnnotationAssertion(Annotation( "possible present in mouse") Annotation( "ISBN:0123813611"^^xsd:string) ) AnnotationAssertion( "nucleus of Bishoff") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0018236") AnnotationAssertion(rdfs:label "nucleus of Bischoff") SubClassOf(Annotation( "ISBN:978-1-4615-0037-7") ) # Class: (dorsal column-medial lemniscus pathway) AnnotationAssertion(Annotation( ) "A sensory tract originating in the spinal cord responsible for transmitting fine touch, vibration and conscious proprioceptive information from the body to the cerebral cortex. The components include the fasciculus gracilis and fasciculus cuneatus.") AnnotationAssertion( ) AnnotationAssertion( "DMBA:17759") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "DCML") AnnotationAssertion(Annotation( ) "DCML pathway") AnnotationAssertion(Annotation( ) "dorsal column") AnnotationAssertion(Annotation( ) "dorsal column tract") AnnotationAssertion(Annotation( ) "dorsal column-medial lemniscus pathway") AnnotationAssertion(Annotation( ) "dorsal column-medial lemniscus system") AnnotationAssertion(Annotation( ) "dorsal column-medial lemniscus tract") AnnotationAssertion(Annotation( ) "medial lemniscus tracts") AnnotationAssertion(Annotation( ) "posterior column pathway") AnnotationAssertion(Annotation( ) "posterior column-medial leminscus pathway") AnnotationAssertion(Annotation( ) "posterior column-medial lemniscus system") AnnotationAssertion(Annotation( ) "posterior column/medial leminscus pathway") AnnotationAssertion( "UBERON:0018237") AnnotationAssertion(rdfs:label "dorsal column-medial lemniscus pathway") SubClassOf( ) # Class: (dorsal column nucleus) AnnotationAssertion(Annotation( "ISBN:978-1-4615-0037-7") "A nucleus that contain secondary neurons of the dorsal column-medial lemniscus pathway, which carries fine touch and proprioceptive information from the body to the brain. Examples: gracile nucleus, cuneat nucleus, nucleus of Bishoff.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "MBA:720") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:1947") Annotation( ) "dorsal column nuclei") AnnotationAssertion( "UBERON:0018238") AnnotationAssertion(rdfs:label "dorsal column nucleus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (rhombomere boundary) AnnotationAssertion(Annotation( "GO:0021654") "A boundary delimiting a rhombomere.") AnnotationAssertion( "rhombomere junction") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0018239") AnnotationAssertion(rdfs:label "rhombomere boundary") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (prime adult stage) AnnotationAssertion(Annotation( ) Annotation( "Bgee:AN") "A life cycle stage that starts at completion of development and growth of the sexually mature adult animal, and ends before senescence.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "uberon") AnnotationAssertion( "adulthood stage") AnnotationAssertion( "UBERON:0018241") AnnotationAssertion(rdfs:label "prime adult stage") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (palatine bone horizontal plate) AnnotationAssertion(Annotation( ) Annotation( "MGI:cs") "The part of the palatine bone that forms the posterior part (approximately one third) of the bony palate.(Stedmans).") AnnotationAssertion( "lamina horizontalis") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37931") AnnotationAssertion( "FMA:52901") AnnotationAssertion(Annotation( "FMA:52901") "horizontal plate of palatine bone") AnnotationAssertion(Annotation( "FMA:52901") "lamina horizontalis (os palatinum)") AnnotationAssertion(Annotation( ) Annotation( ) "lamina horizontalis ossis palatini") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "horizontal part of palatine bone") AnnotationAssertion(Annotation( ) "horizontal plate") AnnotationAssertion( "UBERON:0018242") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "palatine bone horizontal plate") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (thymic artery) AnnotationAssertion(Annotation( ) "A vein that supplies blood to the thymus.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:10647") AnnotationAssertion(Annotation( "FMA:10647") "thymic branch of internal thoracic artery") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "thymic arteries") AnnotationAssertion( "UBERON:0018243") AnnotationAssertion(rdfs:comment "The arteries supplying the thymus are derived from the internal thoracic artery, and from the superior thyroid artery and inferior thyroids.[WP]") AnnotationAssertion(rdfs:label "thymic artery") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (superficial cervical thymus) AnnotationAssertion(Annotation( ) "A cervical thymus that is located directly beneath the skin.") AnnotationAssertion( ) AnnotationAssertion( "apparently absent in polyprotodont species (Didelphidae, Dasyuridae, Thylacinidae, Notoryctidae, Peramelidae, and Caenolestidae); paired lobes found in diprotodont (Burramyidae, Petauridae, Phalangeridae, Phascolarctidae, and Tarsipedidae)[DOI:10.1071/ZO9730285]") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0018244") AnnotationAssertion(rdfs:label "superficial cervical thymus") SubClassOf( ) # Class: (deep cervical thymus) AnnotationAssertion(Annotation( ) "A cervical thymus that is located deep in the ventral cervical region, superficial to hyoid, sternomastoid, and depressor neck muscles.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0018245") AnnotationAssertion(rdfs:label "deep cervical thymus") SubClassOf( ) # Class: (thyroid vein) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A vein that drains a thyroid gland.") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:18648") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0018246") AnnotationAssertion(rdfs:label "thyroid vein") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (cervical thymic artery) AnnotationAssertion(Annotation( ) "An artery that supplies a cervical thymus.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0018247") AnnotationAssertion(rdfs:label "cervical thymic artery") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (inferior superficial cervical thymic artery) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0018248") AnnotationAssertion(rdfs:label "inferior superficial cervical thymic artery") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (superior superficial cervical thymic artery) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0018249") AnnotationAssertion(rdfs:label "superior superficial cervical thymic artery") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (middle thyroid artery) AnnotationAssertion( "In Cavio cobaya, arises from the external carotid or distal half of the common carotid artery, passed the thyroid gland cranially or penetrated it to terminate in the inferior laryngeal artery") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0018250") AnnotationAssertion(rdfs:label "middle thyroid artery") SubClassOf( ) SubClassOf( ) # Class: (meningeal vein) AnnotationAssertion(Annotation( ) "One of the veins draining a meninix.") AnnotationAssertion( "In humans, any of several veins that accompany the meningeal arteries, communicate with the sinuses of the dura mater and diploic veins, and drain into the regional veins outside the cranial vault.") AnnotationAssertion( ) AnnotationAssertion( "FMA:50839") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0018251") AnnotationAssertion(rdfs:label "meningeal vein") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (internal pudendal vein) AnnotationAssertion(Annotation( ) "Accompanying vein of internal pudendal artery.") AnnotationAssertion( "In humans, they begin in the deep veins of the penis which issue from the corpus cavernosum penis, accompany the internal pudendal artery, and unite to form a single vessel, which ends in the internal iliac vein. They receive the veins from the urethral bulb, and the perineal and inferior hemorrhoidal veins") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:18917") AnnotationAssertion(Annotation( ) Annotation( ) "vena pudenda interna") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "internal pudic vein") AnnotationAssertion( "UBERON:0018252") AnnotationAssertion(rdfs:label "internal pudendal vein") SubClassOf( ) # Class: (external pudendal vein) AnnotationAssertion(Annotation( ) "One of the veins of the pelvis which drain into the great saphenous vein.") AnnotationAssertion( ) AnnotationAssertion(Annotation( ) Annotation( ) "vena pudenda externa") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "external pudic vein") AnnotationAssertion( "UBERON:0018253") AnnotationAssertion(rdfs:label "external pudendal vein") SubClassOf( ) # Class: (skeletal musculature) AnnotationAssertion( "Added for consistency with MA EMAPA and EHDAA2. See https://github.com/obophenotype/mouse-anatomy-ontology/issues/104") AnnotationAssertion( "EHDAA2:0001842") AnnotationAssertion( "EMAPA:35578") AnnotationAssertion( "MA:0000165") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0018254") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "skeletal musculature") SubClassOf( ) SubClassOf(Annotation( "MA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (jejunal artery) AnnotationAssertion(Annotation( ) Annotation( ) "A branch of the superior mesenteric artery that supplies the jejunum.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:14808") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:14808") "jejunal branch of superior mesenteric artery") AnnotationAssertion( "UBERON:0018255") AnnotationAssertion(rdfs:label "jejunal artery") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lacrimal vein) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A vein that drains a lacrimal gland.") AnnotationAssertion( ) AnnotationAssertion( "FMA:51779") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0018256") AnnotationAssertion(rdfs:label "lacrimal vein") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (submucosa of digestive tract) AnnotationAssertion(Annotation( ) "Any portion of submucosa that lines the digestive tract.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0018257") AnnotationAssertion(rdfs:label "submucosa of digestive tract") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (layer of muscle tissue) AnnotationAssertion(Annotation( ) "Any organ component layer that consists of muscle tissue.") AnnotationAssertion(Annotation( "NCIT") "NCITA class may refer to smooth muscle only") AnnotationAssertion( ) AnnotationAssertion( "FMA:45634") AnnotationAssertion( "NCIT:C75444") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0018260") AnnotationAssertion(rdfs:label "layer of muscle tissue") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (muscular coat of digestive tract) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A muscular coat that is part of a digestive tract.") AnnotationAssertion( "responsible for gut movement, such as peristalsis") AnnotationAssertion( "tunica muscularis of digestive tract") AnnotationAssertion( "uberon") AnnotationAssertion( "muscular layer of digestive tract") AnnotationAssertion( "muscularis externa of digestive tract") AnnotationAssertion( "tunica externa of digestive tract") AnnotationAssertion( "UBERON:0018261") AnnotationAssertion(rdfs:label "muscular coat of digestive tract") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (dorsal zone of medial entorhinal cortex) AnnotationAssertion( ) AnnotationAssertion( "MBA:926") AnnotationAssertion(Annotation( "ABA:ENTm") "entorhinal area, medial part, dorsal zone") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:3141") "dorsal zone of the medial part of the entorhinal area") AnnotationAssertion(Annotation( "NeuroNames:3141") "entorhinal area, medial part, dorsal zone") AnnotationAssertion(Annotation( "NeuroNames:3141") "entorhinal area, medial part, dorsal zone, layers 1-6") AnnotationAssertion( "UBERON:0018262") AnnotationAssertion(rdfs:label "dorsal zone of medial entorhinal cortex") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (ventral zone of medial entorhinal cortex) AnnotationAssertion( ) AnnotationAssertion( "MBA:934") AnnotationAssertion(Annotation( "ABA:ENTmv") "entorhinal area, medial part, ventral zone") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:3142") "entorhinal area, medial part, ventral zone") AnnotationAssertion(Annotation( "NeuroNames:3142") "entorhinal area, medial part, ventral zone [Haug]") AnnotationAssertion(Annotation( "NeuroNames:3142") "ventral zone of the medial part of the entorhinal area") AnnotationAssertion( "UBERON:0018263") AnnotationAssertion(rdfs:label "ventral zone of medial entorhinal cortex") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (dorsal lateral ganglionic eminence) AnnotationAssertion(Annotation( "GO:0021851") "The dorsal region of the lateral ganglionic eminence. The cells in this area give rise to embryonic interneuron precursors that will migrate tangentially to the olfactory bulb.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0018264") AnnotationAssertion(rdfs:label "dorsal lateral ganglionic eminence") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (anterior root of zygomatic arch) AnnotationAssertion(Annotation( "MFMO:0000109") "The anterior or rostral end of the zygomatic arch, which includes the temporal process of the zygomatic bone, but also including some of the body of the zygomatic bone. It may also include the zygomatico-temporal suture and the most rostral portion of the zygomatic process of the temporal bone.") AnnotationAssertion( "requires definition see https://github.com/obophenotype/uberon/issues/492") AnnotationAssertion( "MFMO:0000109") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0018265") AnnotationAssertion(rdfs:label "anterior root of zygomatic arch") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "MFMO") ObjectSomeValuesFrom( )) # Class: (third phalanx) AnnotationAssertion(Annotation( "PHENOSCAPE:nizar") "The third phalangeal bone in a digit ray.") AnnotationAssertion( "to be discussed. Should this class be used for the distal phalanges on a 3-phalanx ray (e.g. human finger 2?)") AnnotationAssertion( "UBERONTEMP:8f369965-6ce2-4362-8b36-c0e3c7aba9a9") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0018266") AnnotationAssertion(rdfs:label "third phalanx") SubClassOf( ) # Class: (atlantal spinal nerve foramen) AnnotationAssertion(Annotation( "PHENOSCAPE:nizar") "Foramen housing the root of the spinal nerve seen in the neural arch of the first vertebrae (atlas). (see Edwards 1976).") AnnotationAssertion( "In extant taxa this is restricted to some members of Caudata") AnnotationAssertion( "UBERONTEMP:4fd613b3-3fd4-422e-a2f7-d7a2cde79d60") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0018267") AnnotationAssertion(rdfs:label "atlantal spinal nerve foramen") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (type 1 adrenal tissue) AnnotationAssertion(Annotation( "PHENOSCAPE:nizar") "Adrenal tissue dispersed in clusters, found in periphery and center of adrenal gland in turtles (Yadav, 2008).") AnnotationAssertion(Annotation( "PHENOSCAPE:nizar") "type 1 tissue") AnnotationAssertion( "UBERONTEMP:6eccda87-a879-44fe-b2c6-ffab20dd60ee") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0018268") AnnotationAssertion(rdfs:label "type 1 adrenal tissue") SubClassOf( ) # Class: (type 2 adrenal tissue) AnnotationAssertion(Annotation( "PHENOSCAPE:nizar") "Adrenal tissue aggregated in a dorsal layer covering internal cords, found in lepidosaur adrenal glands. Islets of adrenal tissue found on ventral surface of gland (barely present in squamates). See Yadav, 2008.") AnnotationAssertion(Annotation( "PHENOSCAPE:nizar") "type 2 tissue") AnnotationAssertion( "UBERONTEMP:05a9169f-4c7d-4ff3-a786-48f9252ed6b9") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0018269") AnnotationAssertion(rdfs:label "type 2 adrenal tissue") SubClassOf( ) # Class: (type 3 adrenal tissue) AnnotationAssertion(Annotation( "PHENOSCAPE:nizar") "Adrenal tissue found in archosaurs - tissue arranged in bands, alternating with interrenal cords (Yadav, 2008).") AnnotationAssertion(Annotation( "PHENOSCAPE:nizar") "type 3 tissue") AnnotationAssertion( "UBERONTEMP:0022c3d9-8716-4da7-aed3-5ca1d6ad1f35") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0018270") AnnotationAssertion(rdfs:label "type 3 adrenal tissue") SubClassOf( ) # Class: (type 4 adrenal tissue) AnnotationAssertion(Annotation( "PHENOSCAPE:nizar") "In mammals, adrenal tissue has a cortex and medulla creating a composite adrenal gland (Kardong 2012).") AnnotationAssertion(Annotation( "PHENOSCAPE:nizar") "type 4 tissue") AnnotationAssertion( "UBERONTEMP:1ae042ee-fe94-41bb-ad04-3dbbf9de8622") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0018271") AnnotationAssertion(rdfs:label "type 4 adrenal tissue") SubClassOf( ) # Class: (apex of paracone) AnnotationAssertion(Annotation( "PHENOSCAPE:alex") "The highest elevation of the paracone on a molariform tooth.") AnnotationAssertion( "UBERONTEMP:78630a15-e3fb-49ab-8cf5-22f3a640a2c7") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0018272") AnnotationAssertion(rdfs:label "apex of paracone") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (caniniform region) AnnotationAssertion(Annotation( "PHENOSCAPE:alex") "The anterior region of the maxillary tooth row, if that tooth row contains teeth that are substantially over the premaxillary teeth (see Laurin and Reisz 1995).") AnnotationAssertion( "UBERONTEMP:e6de828b-9063-4e42-848b-ae9d4bdb7161") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0018273") AnnotationAssertion(rdfs:label "caniniform region") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (postcingulum of deciduous premolar 5) AnnotationAssertion(Annotation( "PHENOSCAPE:alex") "A postcingulum found on deciduous premolar 5.") AnnotationAssertion( "UBERONTEMP:122547c2-0bd1-434b-ba32-7c40cd49772d") AnnotationAssertion( "dP5 postcingulum") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0018274") AnnotationAssertion(rdfs:label "postcingulum of deciduous premolar 5") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (posthypocrista of deciduous premolar 5) AnnotationAssertion(Annotation( "PHENOSCAPE:alex") "A posthypocrista found on deciduous premolar 5.") AnnotationAssertion( "UBERONTEMP:dcecd800-316d-4d72-93fa-0c66f7bb6982") AnnotationAssertion( "dP5 posthypocrista") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0018275") AnnotationAssertion(rdfs:label "posthypocrista of deciduous premolar 5") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (hypoconid) AnnotationAssertion(Annotation( "PHENOSCAPE:alex") "The labial most of three cusps on the talonoid (posterior) end of lower molariform teeth. (modified from http://animaldiversity.ummz.umich.edu/collections/mammal_anatomy/cheek_teeth_structure/).") AnnotationAssertion( "UBERONTEMP:af7baeed-9ce1-4f9b-87d2-a1ee4f414cba") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0018279") AnnotationAssertion(rdfs:label "hypoconid") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete lingual cusp of tooth) AnnotationAssertion( "UBERON:0016929") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0018280") AnnotationAssertion(rdfs:label "obsolete lingual cusp of tooth") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (lower deciduous premolar 5) AnnotationAssertion(Annotation( "PHENOSCAPE:alex") "Fifth premolar (counting anteroposteriorly ) in the lower jaw.") AnnotationAssertion( "UBERONTEMP:ebd28885-699a-4637-9112-4ff68ddb6299") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0018281") AnnotationAssertion(rdfs:label "lower deciduous premolar 5") SubClassOf( ) SubClassOf( ) # Class: (lower molar 3) AnnotationAssertion(Annotation( "PHENOSCAPE:alex") "Third molar (counting anteroposteriorly) in the lower jaw.") AnnotationAssertion( ) AnnotationAssertion( "UBERONTEMP:d55a3eec-6055-46eb-84c5-0e03f25b0122") AnnotationAssertion( "uberon") AnnotationAssertion( "lower wisdom tooth") AnnotationAssertion(Annotation( "PHENOSCAPE:alex") "wisdom tooth") AnnotationAssertion( "UBERON:0018282") AnnotationAssertion(rdfs:label "lower molar 3") SubClassOf( ) SubClassOf( ) # Class: (lower pharyngobranchial toothplate) AnnotationAssertion(Annotation( "PHENOSCAPE:alex") "Pharyngeal toothplate of the lower jaw region; typically associated with ceratobranchial 5 element.") AnnotationAssertion( "need to add relationship: UBERON:'pharyngeal tooth plate' needs relationship part_of 'splanchnocranium'") AnnotationAssertion( "UBERONTEMP:25ba6edf-9fd6-45cc-ad06-7952cb6cd227") AnnotationAssertion(Annotation( "PHENOSCAPE:alex") "lower pharyngeal toothplate") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0018283") AnnotationAssertion(rdfs:label "lower pharyngobranchial toothplate") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lower premolar 1) AnnotationAssertion(Annotation( "PHENOSCAPE:alex") "First premolar (counting anteroposteriorly ) in the lower jaw.") AnnotationAssertion( "UBERONTEMP:31f522c3-c02f-42a7-b998-4881dffb8536") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0018284") AnnotationAssertion(rdfs:label "lower premolar 1") SubClassOf( ) SubClassOf( ) # Class: (lower premolar 2) AnnotationAssertion(Annotation( "PHENOSCAPE:alex") "Second premolar (counting anteroposteriorly ) in the lower jaw.") AnnotationAssertion( "UBERONTEMP:51fc0a23-6be1-4341-9048-34863ba2cadd") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0018285") AnnotationAssertion(rdfs:label "lower premolar 2") SubClassOf( ) SubClassOf( ) # Class: (molar 1 posteroloph) AnnotationAssertion(Annotation( "PHENOSCAPE:alex") "Posteroloph found on the first molar tooth.") AnnotationAssertion( "UBERONTEMP:b63c2cf1-c60f-46f2-b4e4-64a17bf18b6d") AnnotationAssertion(Annotation( "1") "M1 posteroloph") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0018286") AnnotationAssertion(rdfs:label "molar 1 posteroloph") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (premolar 1 hypoconoid) AnnotationAssertion(Annotation( "PHENOSCAPE:alex") "Hypoconid found on the first premolar tooth.") AnnotationAssertion( "UBERONTEMP:518a52d0-1c9b-4d23-922c-d5045791bcf0") AnnotationAssertion( "p1 hypoconoid") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0018287") AnnotationAssertion(rdfs:label "premolar 1 hypoconoid") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (paracone) AnnotationAssertion(Annotation( "PHENOSCAPE:alex") "The anterior cusp along the labial margin seen in the molar or premolar teeth of mammals. (modified from http://animaldiversity.ummz.umich.edu/collections/mammal_anatomy/cheek_teeth_structure/).") AnnotationAssertion( "UBERONTEMP:0805962a-bdbc-4314-8920-327e041a406b") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0018288") AnnotationAssertion(rdfs:label "paracone") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (paracristid) AnnotationAssertion(Annotation( "PHENOSCAPE:alex") "A crest running along the labial margin of molarifomr teeth of mammals. (modified from http://animaldiversity.ummz.umich.edu/collections/mammal_anatomy/cheek_teeth_structure/).") AnnotationAssertion( "UBERONTEMP:2920b9ce-f709-4fe2-ad14-e6726227d3ae") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0018289") AnnotationAssertion(rdfs:label "paracristid") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (postcingulum) AnnotationAssertion(Annotation( "PHENOSCAPE:alex") "A shelf like ridge on the posterior (distal) outside edge of the upper molariform teeth. (modified from http://animaldiversity.ummz.umich.edu/collections/mammal_anatomy/cheek_teeth_structure/).") AnnotationAssertion( "UBERONTEMP:65b40ec3-fa39-4802-bfa8-fb6145400c29") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0018290") AnnotationAssertion(rdfs:label "postcingulum") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (posteroloph) AnnotationAssertion(Annotation( "PHENOSCAPE:alex") "A shelf like ridge on the outside of the upper molariform teeth. (modified from http://animaldiversity.ummz.umich.edu/collections/mammal_anatomy/cheek_teeth_structure/).") AnnotationAssertion( "UBERONTEMP:09a9f799-951b-46b4-8dc2-d4d486ff6542") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0018291") AnnotationAssertion(rdfs:label "posteroloph") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (posthypocrista) AnnotationAssertion(Annotation( "PHENOSCAPE:alex") "A crest on the hypoconid of molariform teeth. (modified from http://animaldiversity.ummz.umich.edu/collections/mammal_anatomy/cheek_teeth_structure/).") AnnotationAssertion( "UBERONTEMP:071e0de7-9e35-437a-b985-d9ec084e5a42") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0018292") AnnotationAssertion(rdfs:label "posthypocrista") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (precingulum) AnnotationAssertion(Annotation( "PHENOSCAPE:alex") "A shelf like ridge on the proximal (mesial) outside edge of the upper molariform teeth. (modified from http://animaldiversity.ummz.umich.edu/collections/mammal_anatomy/cheek_teeth_structure/).") AnnotationAssertion( "UBERONTEMP:4203b16d-bb40-4289-aaae-363363d7db6f") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0018293") AnnotationAssertion(rdfs:label "precingulum") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (premolar 1) AnnotationAssertion(Annotation( "PHENOSCAPE:alex") "First premolar (counting anteroposteriorly) in the jaw.") AnnotationAssertion( ) AnnotationAssertion( "UBERONTEMP:df0eb189-0c10-493d-b5ce-8fd091e09456") AnnotationAssertion( "first premolar tooth") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "p1") AnnotationAssertion( "UBERON:0018294") AnnotationAssertion(rdfs:label "premolar 1") SubClassOf( ) # Class: (preprotocrista) AnnotationAssertion(Annotation( ) Annotation( "PHENOSCAPE:curators"^^xsd:string) "An enamel ridge joining the protocone and the paracone on the occlusal surface of a maxillary molar.") AnnotationAssertion( "UBERONTEMP:1483131a-b5c4-484a-8ffa-0dc5e0a5ef34") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0018295") AnnotationAssertion(rdfs:label "preprotocrista") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (replacement tooth) AnnotationAssertion(Annotation( "PHENOSCAPE:Nizar") "Tooth (often obscured from view) in a 'waiting' position that will replace an existing tooth (i.e. a tooth that is well visible in the jaw).") AnnotationAssertion( "additional feedback required. Should this be classified as a primary tooth?") AnnotationAssertion( "UBERONTEMP:dfc468f8-45f8-486f-b943-e4284d5055e8") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0018296") AnnotationAssertion(rdfs:label "replacement tooth") SubClassOf( ) # Class: (resorption pit) AnnotationAssertion(Annotation( "PHENOSCAPE:curators"^^xsd:string) "A pit formed in an existing functional tooth, causing resorption of the surrounding dentine and periodontal tissues. (modified from LeBlanc and Reisz 2013, see figures 8, 10 for more details).") AnnotationAssertion( "UBERONTEMP:4fffbeb1-0774-4eb2-860e-5b50dece221c") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0018297") AnnotationAssertion(rdfs:label "resorption pit") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (stylocone) AnnotationAssertion(Annotation( "PHENOSCAPE:Alex") "Cusp found on a platform that is buccaal and mesial to the meta and paracones. Modified from Kermack 1967. Molar evolution in Mesozoic mammals.") AnnotationAssertion( "UBERONTEMP:1e10c6fb-a36f-4151-957b-7a0aaf6816ba") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0018298") AnnotationAssertion(rdfs:label "stylocone") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (mandibular symphyseal tooth) AnnotationAssertion(Annotation( "PHENOSCAPE:curators"^^xsd:string) "Tooth of the lower jaw that is adjacent to the mandibular symphysis.") AnnotationAssertion( "symphyseal tooth") AnnotationAssertion( "UBERONTEMP:2f99ad4b-d842-4ae9-8886-87ee98811fe5") AnnotationAssertion( "lower jaw symphyseal tooth") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0018299") AnnotationAssertion(rdfs:label "mandibular symphyseal tooth") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (upper canine 1) AnnotationAssertion(Annotation( "PHENOSCAPE:Alex") "First canine (counting anteroposteriorly) in the upper jaw.") AnnotationAssertion( "UBERONTEMP:14c28c28-237e-435d-9883-8dff529e64cc") AnnotationAssertion(Annotation( ) "UC1") AnnotationAssertion( "upper canine UC1") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0018300") AnnotationAssertion(rdfs:label "upper canine 1") SubClassOf( ) # Class: (upper deciduous premolar 5) AnnotationAssertion(Annotation( "PHENOSCAPE:Alex") "Fifth premolar (counting anteroposteriorly ) in the upper jaw.") AnnotationAssertion( "UBERONTEMP:ae0e62b6-59ad-4c21-8e15-b67570c5137a") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0018301") AnnotationAssertion(rdfs:label "upper deciduous premolar 5") SubClassOf( ) SubClassOf( ) # Class: (upper molar 1) AnnotationAssertion(Annotation( "PHENOSCAPE:Alex") "First molar (counting anteroposteriorly) in the upper jaw.") AnnotationAssertion( "UBERONTEMP:12acbe6c-9036-48e3-b1a0-1f2fdaa0241d") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0018302") AnnotationAssertion(rdfs:label "upper molar 1") SubClassOf( ) SubClassOf( ) # Class: (adrenal tissue) AnnotationAssertion(Annotation( "PHENOSCAPE:Alex") "Tissue that is part of some adrenal gland.") AnnotationAssertion( "TODO - describe typology of adrenal gland tissue used in this ontology") AnnotationAssertion( "NCIT:C32051") AnnotationAssertion( "UBERONTEMP:a7bf197b-0db2-467e-824e-be45b39e2672") AnnotationAssertion(Annotation( "ncithesaurus:Adrenal_Gland_Tissue") "adrenal gland tissue") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0018303") AnnotationAssertion(rdfs:label "adrenal tissue") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (post-axial region of pectoral appendage) AnnotationAssertion(Annotation( "PHENOSCAPE:Nizar") "Anatomical region lying to the posteiror or ventral side of the metapterygial axis.") AnnotationAssertion( "post-axial region") AnnotationAssertion( "UBERONTEMP:498d2b0d-6e51-4d20-ba52-8d409676994e") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0018304") AnnotationAssertion(rdfs:label "post-axial region of pectoral appendage") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (bicipital surface) AnnotationAssertion(Annotation( "PHENOSCAPE:Nizar") "Region of the humerus associated with the biceps attachment areas.") AnnotationAssertion( "UBERONTEMP:1aa93660-3c3d-4aff-94fa-93ea38c82df8") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0018305") AnnotationAssertion(rdfs:label "bicipital surface") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (bulge) AnnotationAssertion(Annotation( "PHENOSCAPE:Nizar") "Expanded and swollen region of a surface that is otherwise relatively flat.") AnnotationAssertion( "UBERONTEMP:dfedeba6-f608-4adc-9e69-b1169f6b0fb3") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0018306") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "bulge") SubClassOf( ) # Class: (keel) AnnotationAssertion(Annotation( "PHENOSCAPE:Nizar") "Ridge shaped projection, similar to the keel of a boat.") AnnotationAssertion( "Candidate for obsoletion") AnnotationAssertion( "UBERONTEMP:ab8d6483-aa3e-480c-a8dc-339e727946fa") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0018307") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "keel") SubClassOf( ) # Class: (caudal melanophore spot) AnnotationAssertion(Annotation( "PHENOSCAPE:Nizar") "Distinct colored area on the caudal region of an organism, similar in shape to a spot, i.e. circular.") AnnotationAssertion( "caudal spot") AnnotationAssertion( "UBERONTEMP:a8fd6c8c-5029-4740-8e0c-99856641de75") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0018308") AnnotationAssertion(rdfs:label "caudal melanophore spot") SubClassOf( ) # Class: (obsolete cervical rib) AnnotationAssertion(Annotation( "PHENOSCAPE:Alex") "Rib attached to the cervical vertebrae.") AnnotationAssertion( "UBERON:0018144") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0018311") AnnotationAssertion(rdfs:label "obsolete cervical rib") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (choanal groove) AnnotationAssertion(Annotation( "PHENOSCAPE:Alex") "Grooves on the palatine bone which denote the passage of the choana or internal naris.") AnnotationAssertion( "found primarily in lepidosaurs") AnnotationAssertion( "UBERONTEMP:40f3ccb2-6447-4d14-b3db-b1c4bb41464b") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0018314") AnnotationAssertion(rdfs:label "choanal groove") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (cuboid facet of calcaneum) AnnotationAssertion(Annotation( "PHENOSCAPE:Alex") "Facet on the anterior surface of the calcaneus (as called calcaneum) for the articulation of the cuboid bone.") AnnotationAssertion( "UBERONTEMP:a3287636-2522-466e-9310-942cc1f3cd35") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0018316") AnnotationAssertion(rdfs:label "cuboid facet of calcaneum") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (entocarotid fossa) AnnotationAssertion(Annotation( "PHENOSCAPE:Alex") "A depression on the lateral surface of the braincase posterior to the Vidian canal (Conrad 2008).") AnnotationAssertion( "UBERONTEMP:0ac04df7-2f9b-4c8a-bb52-f46b396e82b9") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0018318") AnnotationAssertion(rdfs:label "entocarotid fossa") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (extramural oviduct) AnnotationAssertion(Annotation( "PHENOSCAPE:Alex") "Section of the oviduct external to the uterine wall.") AnnotationAssertion( "UBERONTEMP:a9598e4a-b173-43af-96ef-20f80182c8fd") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0018319") AnnotationAssertion(rdfs:label "extramural oviduct") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (flexor sesamoid) AnnotationAssertion(Annotation( "PHENOSCAPE:alex") "A sesamoid bone located near or in the flexor musculature of a joint.") AnnotationAssertion( "UBERONTEMP:d4bf48eb-10b0-4a4b-982a-55fe6154c741") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0018320") AnnotationAssertion(rdfs:label "flexor sesamoid") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (foramen for glossopharyngeal nerve) AnnotationAssertion(Annotation( "PHENOSCAPE:alex") "Foramen that allows the passge of the glossopharyngeal nerve (cranial nerve IX).") AnnotationAssertion( "UBERONTEMP:9ca0bda7-9111-4f59-bc72-5d47bc3d7d61") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0018321") AnnotationAssertion(rdfs:label "foramen for glossopharyngeal nerve") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (hyoid articular area) AnnotationAssertion(Annotation( "PHENOSCAPE:alex") "Area on the otic capsule for the articulation of the hyoid.") AnnotationAssertion( "UBERONTEMP:e1c1764a-61b5-4dce-8a59-7ca5a9de0a0b") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0018323") AnnotationAssertion(rdfs:label "hyoid articular area") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (ilioischiadic foramen) AnnotationAssertion(Annotation( "PHENOSCAPE:alex") "Situated just caudal to the acetabulum, the foramen is bound dorsally by the illium and ventrally by the ischium. The foramen transmitts the ischiadic nerves and vessels (Baumel et al. 1993).") AnnotationAssertion( "UBERONTEMP:63e09c69-ac98-49ba-b232-2da5c7b19019") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0018326") AnnotationAssertion(rdfs:label "ilioischiadic foramen") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete incisive process of premaxilla) AnnotationAssertion( "UBERON:0017249") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0018327") AnnotationAssertion(rdfs:label "obsolete incisive process of premaxilla") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (incisura fossa) AnnotationAssertion(Annotation( "PHENOSCAPE:alex") "The condyloid fossa on the cranial aspect of the Atlas my be perforated (foramen fossa) or have an open dorsal notch (Incisura fossa) in which the apex of the dens rides. (From Baumel et al. 1993).") AnnotationAssertion( "UBERONTEMP:9976c3c2-76ad-4a5a-8eeb-453bf0b47aec") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0018328") AnnotationAssertion(rdfs:label "incisura fossa") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (interpterygoid region) AnnotationAssertion(Annotation( "PHENOSCAPE:alex") "The region on the palate corresponding to the location of the pterygoid bone, if present and between the palatine bones and the parasphenoid if not.") AnnotationAssertion( "propose changing palate bone to palate bone series[PHENOSCAPE:ad]") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0018329") AnnotationAssertion(rdfs:label "interpterygoid region") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (interpterygoid vacuity) AnnotationAssertion(Annotation( "PHENOSCAPE:alex") "Open space between on the palate between the pteryogoid bone and the parasphenoid.") AnnotationAssertion( "UBERONTEMP:c459b036-bbb9-4e8b-8a2b-530b761b6603") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0018330") AnnotationAssertion(rdfs:label "interpterygoid vacuity") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (intraramal joint) AnnotationAssertion(Annotation( "PHENOSCAPE:alex") "A joint in the lower jaw that enhances kinesis and for swallowing prey. Allows enhanced mobility and intraramal bending to increase gape.") AnnotationAssertion( "UBERONTEMP:0f283c26-49e5-42e7-8ae1-e391eda7e4ce") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0018331") AnnotationAssertion(rdfs:label "intraramal joint") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lateral dorsal aorta canal) AnnotationAssertion(Annotation( "PHENOSCAPE:Nizar") "One of the branches of the dorsal aorta, after it enters the aortic canal.") AnnotationAssertion( "UBERONTEMP:6f18830d-27e9-4de6-a1a6-34253907bbfe") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0018335") AnnotationAssertion(rdfs:label "lateral dorsal aorta canal") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (maxillary shank) AnnotationAssertion(Annotation( "PHENOSCAPE:alex") "The triangular shaped posterior fold at the angle of the mouth. From Chakrabarty 2006.") AnnotationAssertion( "UBERONTEMP:d176af29-e3f6-4cfa-a8ee-d26740652bfd") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0018336") AnnotationAssertion(rdfs:label "maxillary shank") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (medial cotyla) AnnotationAssertion(Annotation( "PHENOSCAPE:alex") "The medialmost of the cotyla of the lower jaw, for articulation with the cranium.") AnnotationAssertion( "According to Uberon mandible only denotes the dentary of mammals. THis is incorrect[PHENOSCAPE:ad]") AnnotationAssertion( "UBERONTEMP:2d15fa5d-566b-4428-83e4-753ae839a965") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0018338") AnnotationAssertion(rdfs:label "medial cotyla") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (metotic fissure) AnnotationAssertion(Annotation( ) Annotation( "PHENOSCAPE:alex") "An embryonic fissure between the otic capsule and the arches which develop into the occipital bones. The fissure may persist into adulthood. It is also referred to as the 'lateral otic fissure' The metotic fissure opens into the vestibular fontanelle, if the fontanelle is present. (Johanson et al. (2003)). Otherwise it opens to the metotic foramen.") AnnotationAssertion( "UBERONTEMP:41980771-8a82-40d2-877e-3156cc80857b") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0018339") AnnotationAssertion(rdfs:label "metotic fissure") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (midbody melanophore spot) AnnotationAssertion(Annotation( "PHENOSCAPE:alex") "Distinct colored area on the midbody region of an organism, similar in shape to a spot, i.e. circular.") AnnotationAssertion( "UBERONTEMP:49c8535b-5a5e-42ca-8c77-945b254605f5") AnnotationAssertion( "midbody spot") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0018340") AnnotationAssertion(rdfs:label "midbody melanophore spot") SubClassOf( ) # Class: (nasal process of premaxilla) AnnotationAssertion(Annotation( "PHENOSCAPE:alex") "A bony projection of the premaxilla that extends cadually and separates the nasal bones.") AnnotationAssertion( "Most often documented in reptiles.") AnnotationAssertion( "UBERONTEMP:18a5dd1b-1213-471f-9a0b-06190b1ecf2c") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0018341") AnnotationAssertion(rdfs:label "nasal process of premaxilla") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (nuchal hump) AnnotationAssertion(Annotation( "PHENOSCAPE:Wasila") "Dorsal swelling on the head. Found in cichlid fish. Often only in males and during breeding season, but not exclusively so.") AnnotationAssertion( "UBERONTEMP:042b87f9-5e1a-4070-9c56-1e79cd474cde") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0018342") AnnotationAssertion(rdfs:label "nuchal hump") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (oviduct mucosal fold) AnnotationAssertion(Annotation( ) Annotation( "PHENOSCAPE:alex") "The wall of the fallopian tube includes an elaborately folded mucosa (endosalpinx) surrounded by a muscularis (myosalpinx). The mucosa is lined by a ciliated columnar epithelium with secretory cells, and is folded out into the lumen so that an ovum in the lumen will always be close to the cilia for transport to the uterus.") AnnotationAssertion( "FMA:18537") AnnotationAssertion( "UBERONTEMP:7f3c6bb1-52c7-4392-8944-01182d25a351") AnnotationAssertion(Annotation( "PHENOSCAPE:alex") "endosalpinx") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:18537") "mucosal fold of fallopian tube") AnnotationAssertion(Annotation( "FMA:18537") "mucosal fold of oviduct") AnnotationAssertion( "UBERON:0018343") AnnotationAssertion(rdfs:label "oviduct mucosal fold") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (parastyle) AnnotationAssertion(Annotation( "PHENOSCAPE:alex") "An anterior cusp on the stylar shelf of the tooth.") AnnotationAssertion( "UBERONTEMP:3430efdb-ae20-4568-bce3-888d86cf75ab") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0018344") AnnotationAssertion(rdfs:label "parastyle") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (stylar shelf) AnnotationAssertion(Annotation( ) Annotation( "PHENOSCAPE:curators"^^xsd:string) "The stylar shelf is an an expansion of the cingulum; it often bears small cusps (each with its own name...).") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0018345") AnnotationAssertion(rdfs:label "stylar shelf") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (parietal notch) AnnotationAssertion(Annotation( "PHENOSCAPE:alex") "A pronounced notch or cavity in the lateral face of the parietal.") AnnotationAssertion( "UBERONTEMP:2937dfe8-d5be-48e6-a67e-2f1c11dbc7d5") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0018346") AnnotationAssertion(rdfs:label "parietal notch") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pars canalicularis of petrosal) AnnotationAssertion( "UBERONTEMP:5b20659c-8d12-4809-9f5a-ad4bb047fc65") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0018347") AnnotationAssertion(rdfs:label "pars canalicularis of petrosal") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (petrosal bone) AnnotationAssertion( "distinct from UBERON:0001694 petrous part of temporal bone; [PMID:19438763]") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0018348") AnnotationAssertion(rdfs:label "petrosal bone") SubClassOf( ) # Class: (pharyngeal apophysis) AnnotationAssertion(Annotation( "PHENOSCAPE:Wasila") "Ventral process on the neurocranium for the articulation of upper pharyngeal bones. It is variably composed of the parasphenoid, basioccipital, and prootic depending on the species. From: Greenwood, PH (1978). A review of the pharyngeal hypophysis and its significance in the classification of African cichlid fishes. Bull. Br. Mus. Nat. Hist. (Zool.) 33: 297-323.") AnnotationAssertion( "UBERONTEMP:131c5051-fb07-4138-9f06-eae8880a6338") AnnotationAssertion(Annotation( "PHENOSCAPE:Wasila") "neurocranium apophysis") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0018349") AnnotationAssertion(rdfs:label "pharyngeal apophysis") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (precerebral fontanelle) AnnotationAssertion(Annotation( "PHENOSCAPE:Alex") "The lack of chondrification of the anterior wall of the cranial cavity in front of the pineal foramen.....(Hanken and Hall).") AnnotationAssertion( "UBERONTEMP:43fdac75-44ba-45b0-bc85-bbd53076852f") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0018351") AnnotationAssertion(rdfs:label "precerebral fontanelle") SubClassOf( ) # Class: (recessus vena jugularis) AnnotationAssertion(Annotation( "PHENOSCAPE:Alex") "As defined here, this refers to a depression on the lateral surface of the braincase posterior to the Vidian canal as opposed to the carotid fossa...(Conrad 2008).") AnnotationAssertion( "UBERONTEMP:65e056b3-ec2f-4eba-a8e5-c12b137f1060") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0018354") AnnotationAssertion(rdfs:label "recessus vena jugularis") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (rostral entotympanic element) AnnotationAssertion(Annotation( "PHENOSCAPE:Alex") "An entotympanic that arises in forward part of tympanic floor. It may be intimately fused witA cartilage of tube during development(MacPhee (1981: 62)) in contrast to a caudal entotympanic arising in the rear tympanic floor. From O'Leary et al. 2012.") AnnotationAssertion( "UBERONTEMP:c5825cfa-edc2-4717-8625-90ac3f8b6dd3") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0018356") AnnotationAssertion(rdfs:label "rostral entotympanic element") SubClassOf( ) # Class: (sensory pore) AnnotationAssertion( "UBERONTEMP:021ff296-2e02-4da5-af3b-b3e7220ac03b") AnnotationAssertion(Annotation( "PHENOSCAPE:Wasila") "sensory canal pore") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0018357") AnnotationAssertion(rdfs:label "sensory pore") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (spina externa) AnnotationAssertion(Annotation( "PHENOSCAPE:Alex") "A median bony point projecting from the anterior and ventral margin of the sternum of a bird. From http://www.merriam-webster.com/dictionary/spina%20externa.") AnnotationAssertion( "UBERONTEMP:0bc2755c-6069-42f5-a9f4-b00b7b3cc25a") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0018358") AnnotationAssertion(rdfs:label "spina externa") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (subolfactory process) AnnotationAssertion(Annotation( "PHENOSCAPE:Alex") "The ventral portion of the frontals which forms part of the lateral wall of the braincase. Modified from Lee and Caldwell 1998.") AnnotationAssertion( "UBERONTEMP:41e8ff4d-2e04-4d81-8db9-a8038e63f76b") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0018359") AnnotationAssertion(rdfs:label "subolfactory process") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (suborbital foramen) AnnotationAssertion(Annotation( "PHENOSCAPE:Nizar") "Foramen located below the orbit and forming a passageway for nerves (eg fifth cranial nerve).") AnnotationAssertion( "UBERONTEMP:3e50fa07-b01a-491f-a67d-11f63e8cf0aa") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0018360") AnnotationAssertion(rdfs:label "suborbital foramen") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (supracondylar tubercle) AnnotationAssertion(Annotation( "PHENOSCAPE:Nizar") "Anatomical projection on the distal region of the femur or humerus and close to the condyles.") AnnotationAssertion( "UBERONTEMP:f721b85c-54d3-4e89-a61e-bfddacf0fe93") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0018362") AnnotationAssertion(rdfs:comment "found on femur or humerus") AnnotationAssertion(rdfs:label "supracondylar tubercle") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete supracoracoid nerve foramen) AnnotationAssertion(Annotation( "PHENOSCAPE:Nizar") "Opening for the supracoracoid nerve in the supracoracoid.") AnnotationAssertion( "UBERON:3000778") AnnotationAssertion( "UBERONTEMP:8bd39461-7e48-428f-8f19-fa2700bc3796") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0018363") AnnotationAssertion(rdfs:label "obsolete supracoracoid nerve foramen") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (suprameatal foramen) AnnotationAssertion(Annotation( "PHENOSCAPE:Nizar") "Foramen in the temporal bone, adjacent to the base of the zygomatic process.") AnnotationAssertion( "UBERONTEMP:8aa1a55e-924a-46a7-82af-9e8406a5149d") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0018364") AnnotationAssertion(rdfs:label "suprameatal foramen") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (supratemporal process) AnnotationAssertion(Annotation( "PHENOSCAPE:Nizar") "Process of the parietal.") AnnotationAssertion( "UBERONTEMP:4d719e1e-df5d-4735-9490-45e6e22b549a") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0018365") AnnotationAssertion(rdfs:label "supratemporal process") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (supratendinal bridge) AnnotationAssertion(Annotation( "PHENOSCAPE:Nizar") "Ossified bridge over a tendon; Particularly, the bridge over the extensor canal at the distal end of the tibiotarsus of certain birds. The presence of the bridge and the position of the canal opening relative to the condyles may have phylogenetic significance. Ericson (1997). http://palaeos.com/vertebrates/glossary/glossarySq.html.") AnnotationAssertion( "UBERONTEMP:27dfdd96-d1ca-44b3-876b-390ed5d21c23") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0018366") AnnotationAssertion(rdfs:label "supratendinal bridge") SubClassOf( ) # Class: (processus ventralis of thoracic vertebra) AnnotationAssertion(Annotation( "PHENOSCAPE:Alex") "The crest is present on the ventral side of the bodies of the thoracic vertebra (modified from Baumel et al. 1993).") AnnotationAssertion( "found in some birds") AnnotationAssertion( "NOID:1") AnnotationAssertion(Annotation( "PHENOSCAPE:Alex") "hypapophysis, crista ventralis corporis, crista ventralis, processus latus") AnnotationAssertion( "processus ventralis") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0018367") AnnotationAssertion(rdfs:label "processus ventralis of thoracic vertebra") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (processus ventrolateralis of thoracic vertebra) AnnotationAssertion(Annotation( "PHENOSCAPE:Alex") "Ventrolaerally oriented, paired projections atttached to the ventrolateral border of the body of certain thoracic vertebra; the ventrolateral crest flank the crista ventralis on each side. From Baumel et al. 1993.") AnnotationAssertion( "found in some birds") AnnotationAssertion( "NOID:1") AnnotationAssertion(Annotation( "PHENOSCAPE:Alex") "crista ventrolateralis, processus inferolateralis") AnnotationAssertion( "processus ventrolateralis") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0018368") AnnotationAssertion(rdfs:label "processus ventrolateralis of thoracic vertebra") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (ventral supracondylar tubercle) AnnotationAssertion(Annotation( "PHENOSCAPE:Alex") Annotation( "PHENOSCAPE:Nizar") "Tubercle on the distal humerus for the origin of the Lig. collaterale ventral of the elbow joint. Modified from Baumel et al. 1993.") AnnotationAssertion( "UBERONTEMP:227c8fa9-af2b-4301-9c95-641d39864df6") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0018371") AnnotationAssertion(rdfs:label "ventral supracondylar tubercle") SubClassOf( ) # Class: (dorsal supracondylar tubercle) AnnotationAssertion(Annotation( "PHENOSCAPE:Alex") Annotation( "PHENOSCAPE:Nizar") "Tubercle on the dorsal border of the distal humerus, a short distance from the dorsal epicondyle, for the origin of the m extensor carpe radialis modifeid from Baumel et al. 1993.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0018372") AnnotationAssertion(rdfs:label "dorsal supracondylar tubercle") SubClassOf( ) # Class: (deciduous premolar 5) AnnotationAssertion( "deciduous premolar 5") AnnotationAssertion( "primary premolar 5 tooth") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "dP5") AnnotationAssertion( "UBERON:0018375") AnnotationAssertion(rdfs:label "deciduous premolar 5") SubClassOf( ) SubClassOf( ) # Class: (molar tooth 1) AnnotationAssertion(Annotation( "UBERON:cjm"^^xsd:string) "The molar tooth of the upper or lower jaw that is phylogenetically number 1.") AnnotationAssertion( ) AnnotationAssertion( "FMA:321614") AnnotationAssertion( "first molar tooth") AnnotationAssertion( "molar 1") AnnotationAssertion( "molar 1 tooth") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "m1") AnnotationAssertion( "UBERON:0018376") AnnotationAssertion(rdfs:label "molar tooth 1") SubClassOf( ) # Class: (molar tooth 3) AnnotationAssertion(Annotation( "UBERON:cjm"^^xsd:string) "The molar tooth of the upper or lower jaw that is phylogenetically number 3.") AnnotationAssertion(Annotation( ) "A wisdom tooth is in humans any of the usually four third molars, including mandibular third molar and maxillary third molar. Wisdom teeth usually appear between the ages of 17 and 25. Most adults have four wisdom teeth, but it is possible to have morebin which case they are called supernumerary teethbor fewerba condition called hypodontia. Wisdom teeth commonly affect other teeth as they develop, becoming impacted or 'coming in sideways'. They are often extracted when this occurs.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:321612") AnnotationAssertion( "MESH:A14.254.860.525.500") AnnotationAssertion( "NCIT:C60732") AnnotationAssertion( "molar 3") AnnotationAssertion( "molar 3 tooth") AnnotationAssertion( "third molar tooth") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "m3") AnnotationAssertion(Annotation( "NCBITaxon:9606"^^xsd:string) Annotation( ) "wisdom tooth") AnnotationAssertion( "UBERON:0018377") AnnotationAssertion(rdfs:label "molar tooth 3") SubClassOf( ) # Class: (crustacean larval stage) AnnotationAssertion(Annotation( ) "The larval stage of a crustacean, the stages of which are separated my moults. Typically this goes through a nauplius - zoea - post-larval cycle.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0018378") AnnotationAssertion(rdfs:label "crustacean larval stage") SubClassOf( ) # Class: (interoceptor) AnnotationAssertion(Annotation( ) "A sensory receptor that detects stimulus within the body. Examples of stimuli that would be detected by interoceptors include blood pressure and blood oxygen level.") AnnotationAssertion( ) AnnotationAssertion( "FMA:84656") AnnotationAssertion(Annotation( "FMA:84656") "enteroceptor") AnnotationAssertion(Annotation( "FMA:84656") "visceroceptor") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0018389") AnnotationAssertion(rdfs:label "interoceptor") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (chemoreceptor) AnnotationAssertion(Annotation( ) "A sensory receptor that detects chemical stimulus within the body.") AnnotationAssertion(Annotation( "MESH:A08.800.550.700.120") "Cells specialized to detect chemical substances and relay that information centrally in the nervous system. Chemoreceptors may monitor external stimuli, as in taste and olfaction, or internal stimuli, such as the concentrations of oxygen and carbon dioxide in the blood.") AnnotationAssertion( "FMA:85604") AnnotationAssertion( "MESH:A08.800.550.700.120") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0018391") AnnotationAssertion(rdfs:label "chemoreceptor") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (arterial baroreceptor) AnnotationAssertion(Annotation( ) "Arterial baroreceptors are stretch receptors that are stimulated by distortion of the arterial wall when pressure changes.") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "MESH:A08.800.050.800.900.700") "arterial stretch receptor") AnnotationAssertion( "UBERON:0018392") AnnotationAssertion(rdfs:label "arterial baroreceptor") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (low-pressure baroreceptor) AnnotationAssertion(Annotation( ) "Found in large systemic veins, in pulmonary vessels, and in the walls of the right atrium and ventricles of the heart (the atrial volume receptors).") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0018393") AnnotationAssertion(rdfs:label "low-pressure baroreceptor") SubClassOf( ) # Class: (vein baroreceptor) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A baroreceptor that located_in a vein.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0018394") AnnotationAssertion(rdfs:label "vein baroreceptor") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (cardiac baroreceptor) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A baroreceptor that located_in a heart.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0018395") AnnotationAssertion(rdfs:label "cardiac baroreceptor") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pulmonary baroreceptor) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A baroreceptor that located_in a pulmonary vascular system.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0018396") AnnotationAssertion(rdfs:label "pulmonary baroreceptor") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (posterior superior alveolar artery) AnnotationAssertion(Annotation( ) "The posterior superior alveolar artery (posterior dental artery) is given off from the maxillary, frequently in conjunction with the infraorbital just as the trunk of the vessel is passing into the pterygopalatine fossa.") AnnotationAssertion( ) AnnotationAssertion( "FMA:49757") AnnotationAssertion(Annotation( "FMA:49757") "superior posterior alveolar artery") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0018397") AnnotationAssertion(rdfs:label "posterior superior alveolar artery") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (superior alveolar nerve) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:52930") AnnotationAssertion(Annotation( "FMA:52930") "superior dental nerve") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0018398") AnnotationAssertion(rdfs:label "superior alveolar nerve") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (posterior superior alveolar nerve) AnnotationAssertion(Annotation( ) "The posterior superior alveolar branches (posterior superior dental branches) arise from the trunk of the maxillary nerve just before it enters the infraorbital groove; they are generally two in number, but sometimes arise by a single trunk. They descend on the tuberosity of the maxilla and give off several twigs to the gums and neighboring parts of the mucous membrane of the cheek. They then enter the posterior alveolar canals on the infratemporal surface of the maxilla, and, passing from behind forward in the substance of the bone, communicate with the middle superior alveolar nerve, and give off branches to the lining membrane of the maxillary sinus and gingival and dental branches to each molar tooth from a superior dental plexus; these branches enter the apical foramina at the roots of the teeth. The posterior superior alveolar nerve innervates the second and third maxillary molars, and two of the three roots of the maxillary first molar (all but the mesiobuccal root). When giving a Posterior Superior Alveolar nerve block, it will anesthetize the mesialbuccal root of the maxillary first molar approximately 72% of the time.") AnnotationAssertion( ) AnnotationAssertion( "FMA:52931") AnnotationAssertion(Annotation( "FMA:52931") "posterior superior dental nerve") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "posterior superior alveolar branches") AnnotationAssertion( "UBERON:0018401") AnnotationAssertion(rdfs:label "posterior superior alveolar nerve") SubClassOf(Annotation( "FMA"^^xsd:string) ) DisjointClasses(Annotation( "lexical"^^xsd:string) ) # Class: (inferior alveolar nerve) AnnotationAssertion( ) AnnotationAssertion( "FMA:53243") AnnotationAssertion(Annotation( "FMA:53243") "inferior dental nerve") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0018405") AnnotationAssertion(rdfs:label "inferior alveolar nerve") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (mental nerve) AnnotationAssertion(Annotation( ) "Mental nerve is a general somatic afferent (sensory) nerve which provides sensation to the anterior aspects of the chin and lower lip as well as the buccal gingivae of the mandibular anterior teeth and the premolars. It is a branch of the posterior trunk of the inferior alveolar nerve, which is itself a branch of the mandibular division of the trigeminal nerve (CN V). The nerve emerges at the mental foramen in the mandibula, and divides beneath the Depressor anguli oris muscle into three branches: one descends to the skin of the chin. two ascend to the skin and mucous membrane of the lower lip. These branches communicate freely with the facial nerve.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:53250") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0018406") AnnotationAssertion(rdfs:label "mental nerve") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (infra-orbital foramen of maxilla) AnnotationAssertion(Annotation( "UBERON:cjm"^^xsd:string) "A foramen on the exterior of the maxilla that is continuous with the infra-orbital canal and is the conduit for the passage of the infraorbital nerve and artery.") AnnotationAssertion( ) AnnotationAssertion( "FMA:57718") AnnotationAssertion( "MFMO:0000054") AnnotationAssertion(Annotation( ) Annotation( ) "foramen infraorbitale") AnnotationAssertion(Annotation( "FMA:57718") "infra-orbital foramen") AnnotationAssertion(Annotation( "MFMO:0000054") "infraorbital foramen") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0018407") AnnotationAssertion(rdfs:label "infra-orbital foramen of maxilla") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (infra-orbital nerve) AnnotationAssertion(Annotation( ) Annotation( ) "A branch of the maxillary nerve that enters the infraorbital canal and innervates the lower eyelid, upper lip, the nasal vestibule, the upper incisors, canines, premolars, upper gums, lower eyelid and conjunctiva, and part of the nose.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:52978") AnnotationAssertion(Annotation( "FMA:52978") "infraorbital nerve") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "infra-orbital nerve") AnnotationAssertion(Annotation( ) "infraorbital portion") AnnotationAssertion( "UBERON:0018408") AnnotationAssertion(rdfs:label "infra-orbital nerve") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (infra-orbital groove of maxilla) AnnotationAssertion(Annotation( "UBERON:cjm"^^xsd:string) "A groove on the interior of the maxilla that is continuous with the infra-orbital canal and is the conduit for the passage of the infraorbital nerve and artery.") AnnotationAssertion( ) AnnotationAssertion( "FMA:57746") AnnotationAssertion(Annotation( ) "infra-orbital groove") AnnotationAssertion(Annotation( ) "infraorbital groove") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "sulcus infraorbitalis") AnnotationAssertion( "UBERON:0018409") AnnotationAssertion(rdfs:label "infra-orbital groove of maxilla") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lacteal) AnnotationAssertion(Annotation( ) "A lymphatic capillary that absorbs dietary fats in the villi of the small intestine.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:68443") AnnotationAssertion(Annotation( ) "lymphatic capillary of small intestine") AnnotationAssertion(Annotation( ) "small intestine lymphatic capillary") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0018410") AnnotationAssertion(rdfs:label "lacteal") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (ligament of hip joint) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A skeletal ligament that is part of a hip joint.") AnnotationAssertion( ) AnnotationAssertion( "FMA:42868") AnnotationAssertion(Annotation( "FMA:42868") "hip joint ligament") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0018411") AnnotationAssertion(rdfs:label "ligament of hip joint") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (vidian nerve) AnnotationAssertion(Annotation( ) Annotation( ) "A nerve that is formed by the junction of the great petrosal nerve and the deep petrosal nerve and continues on to innervate the palate, nose and lacrimal gland.") AnnotationAssertion(Annotation( "FMA"^^xsd:string) "FMA classifies as an anatomical junction") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:67584") AnnotationAssertion(Annotation( "FMA:67584") "nerve of pterygoid canal") AnnotationAssertion(Annotation( "FMA:67584") "pterygoid canal nerve") AnnotationAssertion(Annotation( "FMA:67584") "vidian nerve") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "nerve of the pterygoid canal") AnnotationAssertion(Annotation( ) "vidian nerve") AnnotationAssertion( "UBERON:0018412") AnnotationAssertion(rdfs:label "vidian nerve") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (facial nerve canal) AnnotationAssertion(Annotation( ) "A Z-shaped canal running through the temporal bone from the internal acoustic meatus to the stylomastoid foramen. It is located within the middle ear region, according to its shape it is divided into three main segments: the labyrinthine, the tympanic, and the mastoidal segment .") AnnotationAssertion( ) AnnotationAssertion( "FMA:54952") AnnotationAssertion(Annotation( "FMA:54952") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "canalis nervi facialis") AnnotationAssertion(Annotation( "FMA:54952") "facial canal") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:54952") "fallopian canal") AnnotationAssertion( "UBERON:0018413") AnnotationAssertion(rdfs:label "facial nerve canal") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (ethmoid foramen) AnnotationAssertion(Annotation( ) "An bone foramen in the ethmoid bone.") AnnotationAssertion( "There are usually two Foramina ethmoidalia present on each side in the dog. Sometimes one is situated rostral to the other, but often it is dorsal. They are not homologous with the Foramen ethmoidale anterius and Foramen ethmoidale posterius of man. Therefore they are not listed separately.[NOMINA ANATOMICA VETERINARIA (2005)]") AnnotationAssertion( ) AnnotationAssertion( "ethmoidal foramen") AnnotationAssertion(Annotation( ) "foramina ethmoidalia") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "ethmoid foramina") AnnotationAssertion(Annotation( ) "ethmoidal foramina") AnnotationAssertion( "UBERON:0018415") AnnotationAssertion(rdfs:comment "Taxon nodes: In humans, refers to anterior or posterior ethmoid foramina") AnnotationAssertion(rdfs:label "ethmoid foramen") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (petrosal foramen) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A foramen of skull that is part of a petrosal bone.") AnnotationAssertion( "FMA:53158") AnnotationAssertion(Annotation( "FMA:53158") "Foramen petrosum") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0018424") AnnotationAssertion(rdfs:label "petrosal foramen") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (foramen of nasal bone) AnnotationAssertion(Annotation( ) "A vascular foramen opening on the outer surface of a nasal bone.") AnnotationAssertion( ) AnnotationAssertion( "FMA:57653") AnnotationAssertion(Annotation( ) Annotation( ) "foramina nasalia") AnnotationAssertion( "nasal foramen") AnnotationAssertion( "uberon") AnnotationAssertion( "foramen of nasal bone") AnnotationAssertion(Annotation( "FMA:57653") Annotation( ) "nasal foramina") AnnotationAssertion( "UBERON:0018508") AnnotationAssertion(rdfs:label "foramen of nasal bone") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (female inguinal ring) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An inguinal ring that is part of a female reproductive system.") AnnotationAssertion( "EMAPA:19172") AnnotationAssertion( "MA:0003250") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0018529") AnnotationAssertion(rdfs:label "female inguinal ring") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (male inguinal ring) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An inguinal ring that is part of a male reproductive system.") AnnotationAssertion( "EMAPA:29307") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0018530") AnnotationAssertion(rdfs:label "male inguinal ring") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (female superficial inguinal ring) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A deep inguinal ring that is part of a female reproductive system.") AnnotationAssertion( "EMAPA:19174") AnnotationAssertion( "MA:0003252") AnnotationAssertion(Annotation( "MA:0003252") "female external inguinal ring") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0018531") AnnotationAssertion(rdfs:label "female superficial inguinal ring") SubClassOf( ) SubClassOf( ) # Class: (female deep inguinal ring) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A deep inguinal ring that is part of a male reproductive system.") AnnotationAssertion( "EMAPA:19173") AnnotationAssertion( "MA:0003251") AnnotationAssertion(Annotation( "MA:0003251") "female internal inguinal ring") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0018532") AnnotationAssertion(rdfs:label "female deep inguinal ring") SubClassOf( ) SubClassOf( ) # Class: (crus of penis or clitoris) AnnotationAssertion(Annotation( ) "The continuation of each corpus cavernosum of the penis or clitoris, diverging posteriorly to be attached to the pubic arch.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0018533") AnnotationAssertion(rdfs:label "crus of penis or clitoris") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete spinal cord reticular formation) AnnotationAssertion( "FMA:77455") AnnotationAssertion( "SCTID:369268003") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) "formatio reticularis spinalis") AnnotationAssertion(Annotation( "FMA:77455") "reticular formation of spinal cord") AnnotationAssertion(Annotation( "FMA:77455") "spinal reticular formation") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0018534") AnnotationAssertion(rdfs:comment "Obsoleted as NN retricts this to brainstem structures") AnnotationAssertion(rdfs:label "obsolete spinal cord reticular formation") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (mandibular symphyseal region) AnnotationAssertion(Annotation( "MFMO:0000147") "The region of the mandible on or near the midline (near the mandiblular symphysis).") AnnotationAssertion(Annotation( "MFMO:0000147") "symphyseal region") AnnotationAssertion( "MFMO:0000147") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0018542") AnnotationAssertion(rdfs:label "mandibular symphyseal region") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lumen of intestine) AnnotationAssertion(Annotation( ) "The anatomical space within the intestine.") AnnotationAssertion( "see notes in inclusivity in class 'intestine'") AnnotationAssertion( "FMA:14586") AnnotationAssertion( "TADS:0000495") AnnotationAssertion( "WBbt:0005791") AnnotationAssertion( "ZFA:0005807") AnnotationAssertion(Annotation( "FMA:14586") "intestinal lumen") AnnotationAssertion(Annotation( "ZFA:0005807") "intestine lumen") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "ZFA:0005807") "gut lumen") AnnotationAssertion( "UBERON:0018543") AnnotationAssertion(rdfs:label "lumen of intestine") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (trigeminal nerve muscle) AnnotationAssertion(Annotation( "MFMO:0000072") "Muscle innervated by the trigeminal nerve (Cranial Nerve V).") AnnotationAssertion( "MFMO:0000072") AnnotationAssertion( "muscle innervated by the trigeminal nerve") AnnotationAssertion(Annotation( "MFMO:0000072") Annotation( ) "muscles innervated by the trigeminal nerve") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0018544") AnnotationAssertion(rdfs:label "trigeminal nerve muscle") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (nucleus of the bulbocavernosus) AnnotationAssertion(Annotation( "NeuroNames:2700") "A cluster of motoneurons located in the anterior gray column of lumbar segments 5 and 6 of the spinal cord in the rat. Functionally it belongs to the somatic motoneuron pools of the subcortical motor system ( Swanson-2004 ).") AnnotationAssertion( ) AnnotationAssertion( "Before birth, male and female rats have the muscles and the SNB motoneurons innervating them, but both die in females in the first week of life[https://www.msu.edu/~bjlab/snb.html]") AnnotationAssertion( ) AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:2700") "nucleus of the bulbocavernosus") AnnotationAssertion(Annotation( ) "nucleus of the bulbospongiosus") AnnotationAssertion(Annotation( ) "spinal nucleus of the bulbocavernosus") AnnotationAssertion( "UBERON:0018545") AnnotationAssertion(rdfs:label "nucleus of the bulbocavernosus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (ventral wall of dorsal aorta) AnnotationAssertion(Annotation( "ZFA:0005028") Annotation( "ZFA:curator") "Region where blood progenitor markers are expressed. Probable site of definitive hematopoiesis between 36hpf and 4dpf.") AnnotationAssertion( "EFO:0003699") AnnotationAssertion( "TAO:0005028") AnnotationAssertion( "ZFA:0005028") AnnotationAssertion(Annotation( "ZFA:0005028") "DA-PCV joint") AnnotationAssertion(Annotation( "ZFIN:ZDB-PUB-061227-29") "dorsal aorta - posterior cardinal vein joint") AnnotationAssertion(Annotation( "ZFA:0005028") "DA-PCV joint") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "ZFA:0005028") "AGM") AnnotationAssertion(Annotation( "ZFA:0005028") "DA roof") AnnotationAssertion(Annotation( "ZFA:0005028") "DP joint") AnnotationAssertion(Annotation( "ZFA:0005028") "aorta gonad mesonephros region") AnnotationAssertion( "UBERON:0018549") AnnotationAssertion(rdfs:label "ventral wall of dorsal aorta") SubClassOf(Annotation( "ZFA"^^xsd:string) ) SubClassOf( ) SubClassOf(Annotation( "ZFA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "ZFA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (secondary incisor tooth) AnnotationAssertion( ) AnnotationAssertion( "FMA:84201") AnnotationAssertion( "permanent incisor") AnnotationAssertion(Annotation( "FMA:84201") "permanent incisor tooth") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0018550") AnnotationAssertion(rdfs:label "secondary incisor tooth") SubClassOf( ) SubClassOf( ) # Class: (central incisor tooth) AnnotationAssertion( ) AnnotationAssertion( "central incisor") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0018551") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "central incisor tooth") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lateral incisor tooth) AnnotationAssertion( ) AnnotationAssertion( "lateral incisor") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0018552") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "lateral incisor tooth") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (primary central incisor tooth) AnnotationAssertion( "primary central incisor") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0018553") AnnotationAssertion(rdfs:label "primary central incisor tooth") SubClassOf( ) SubClassOf( ) # Class: (primary lateral incisor tooth) AnnotationAssertion( "primary lateral incisor") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0018554") AnnotationAssertion(rdfs:label "primary lateral incisor tooth") SubClassOf( ) SubClassOf( ) # Class: (upper secondary canine tooth) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A secondary canine tooth that is part of a upper jaw region.") AnnotationAssertion( "FMA:55714") AnnotationAssertion(Annotation( "FMA:55714") "maxillary secondary canine tooth") AnnotationAssertion(Annotation( "FMA:55714") "upper permanent canine tooth") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:55714") "permanent upper canine tooth") AnnotationAssertion( "UBERON:0018561") AnnotationAssertion(rdfs:label "upper secondary canine tooth") SubClassOf( ) SubClassOf( ) SubClassOf( ) # Class: (lower secondary canine tooth) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A secondary canine tooth that is part of a lower jaw region.") AnnotationAssertion( "FMA:55715") AnnotationAssertion(Annotation( "FMA:55715") "lower permanent canine tooth") AnnotationAssertion(Annotation( "FMA:55715") "mandibular secondary canine tooth") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:55715") "permanent lower canine tooth") AnnotationAssertion( "UBERON:0018562") AnnotationAssertion(rdfs:label "lower secondary canine tooth") SubClassOf( ) SubClassOf( ) SubClassOf( ) # Class: (lower central secondary incisor tooth) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A lower jaw incisor that is in_the_central_side_of a dentition.") AnnotationAssertion( "FMA:55723") AnnotationAssertion(Annotation( "FMA:55723") "lower central permanent incisor tooth") AnnotationAssertion( "mandibular central permanent incisor") AnnotationAssertion(Annotation( "FMA:55723") "mandibular central secondary incisor tooth") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0018568") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "lower central secondary incisor tooth") SubClassOf( ) SubClassOf( ) # Class: (lower lateral secondary incisor tooth) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A lower jaw incisor that is in_the_lateral_side_of a dentition.") AnnotationAssertion( "FMA:55725") AnnotationAssertion(Annotation( "FMA:55725") "lower lateral permanent incisor tooth") AnnotationAssertion( "mandibular lateral permanent incisor") AnnotationAssertion(Annotation( "FMA:55725") "mandibular lateral secondary incisor tooth") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0018570") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "lower lateral secondary incisor tooth") SubClassOf( ) SubClassOf( ) # Class: (upper first secondary premolar tooth) AnnotationAssertion( "TODO - tooth numbering nomeculature to be aligned across species") AnnotationAssertion( "FMA:55801") AnnotationAssertion(Annotation( "FMA:55801") "maxillary first secondary premolar tooth") AnnotationAssertion(Annotation( "FMA:55801") "upper first permanent premolar tooth") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:55801") "permanent first upper premolar tooth") AnnotationAssertion(Annotation( "FMA:55801") "secondary first upper premolar tooth") AnnotationAssertion( "UBERON:0018571") AnnotationAssertion(rdfs:label "upper first secondary premolar tooth") SubClassOf( ) SubClassOf( ) # Class: (upper second secondary premolar tooth) AnnotationAssertion( "TODO - tooth numbering nomeculature to be aligned across species") AnnotationAssertion( "FMA:55802") AnnotationAssertion(Annotation( "FMA:55802") "maxillary second secondary premolar tooth") AnnotationAssertion(Annotation( "FMA:55802") "upper second permanent premolar tooth") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:55802") "permanent second upper premolar tooth") AnnotationAssertion(Annotation( "FMA:55802") "secondary second upper premolar tooth") AnnotationAssertion( "UBERON:0018572") AnnotationAssertion(rdfs:label "upper second secondary premolar tooth") SubClassOf( ) SubClassOf( ) # Class: (lower first secondary premolar tooth) AnnotationAssertion( "TODO - tooth numbering nomeculature to be aligned across species") AnnotationAssertion( "FMA:55803") AnnotationAssertion(Annotation( "FMA:55803") "lower first permanent premolar tooth") AnnotationAssertion(Annotation( "FMA:55803") "mandibular first secondary premolar tooth") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:55803") "permanent first lower premolar tooth") AnnotationAssertion(Annotation( "FMA:55803") "secondary first lower premolar tooth") AnnotationAssertion( "UBERON:0018573") AnnotationAssertion(rdfs:label "lower first secondary premolar tooth") SubClassOf( ) SubClassOf( ) # Class: (lower second secondary premolar tooth) AnnotationAssertion( "TODO - tooth numbering nomeculature to be aligned across species") AnnotationAssertion( "FMA:55804") AnnotationAssertion(Annotation( "FMA:55804") "lower second permanent premolar tooth") AnnotationAssertion(Annotation( "FMA:55804") "mandibular second secondary premolar tooth") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:55804") "permanent second lower premolar tooth") AnnotationAssertion(Annotation( "FMA:55804") "secondary second lower premolar tooth") AnnotationAssertion( "UBERON:0018574") AnnotationAssertion(rdfs:label "lower second secondary premolar tooth") SubClassOf( ) SubClassOf( ) # Class: (upper first secondary molar tooth) AnnotationAssertion( "TODO - tooth numbering nomeculature to be aligned across species") AnnotationAssertion( "FMA:55811") AnnotationAssertion(Annotation( "FMA:55811") "maxillary first secondary molar tooth") AnnotationAssertion(Annotation( "FMA:55811") "upper first permanent molar tooth") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0018575") AnnotationAssertion(rdfs:label "upper first secondary molar tooth") SubClassOf( ) SubClassOf( ) SubClassOf( ) # Class: (upper second secondary molar tooth) AnnotationAssertion( "TODO - tooth numbering nomeculature to be aligned across species") AnnotationAssertion( "FMA:55812") AnnotationAssertion(Annotation( "FMA:55812") "maxillary second secondary molar tooth") AnnotationAssertion(Annotation( "FMA:55812") "upper second permanent tooth") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0018576") AnnotationAssertion(rdfs:label "upper second secondary molar tooth") SubClassOf( ) SubClassOf( ) # Class: (upper third secondary molar tooth) AnnotationAssertion( "TODO - tooth numbering nomeculature to be aligned across species") AnnotationAssertion( "FMA:55813") AnnotationAssertion(Annotation( "FMA:55813") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "dens serotinus (upper)") AnnotationAssertion(Annotation( "FMA:55813") "maxillary third secondary molar tooth") AnnotationAssertion(Annotation( "FMA:55813") "upper third permanent molar tooth") AnnotationAssertion(Annotation( "FMA:55813") "upper wisdom tooth") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:55813") "permanent third upper molar tooth") AnnotationAssertion(Annotation( "FMA:55813") "secondary third upper molar tooth") AnnotationAssertion( "UBERON:0018577") AnnotationAssertion(rdfs:label "upper third secondary molar tooth") SubClassOf( ) SubClassOf( ) # Class: (lower first secondary molar tooth) AnnotationAssertion( "TODO - tooth numbering nomeculature to be aligned across species") AnnotationAssertion( "FMA:55814") AnnotationAssertion(Annotation( "FMA:55814") "lower first permanent molar tooth") AnnotationAssertion(Annotation( "FMA:55814") "mandibular first secondary molar tooth") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0018578") AnnotationAssertion(rdfs:label "lower first secondary molar tooth") SubClassOf( ) SubClassOf( ) # Class: (lower second secondary molar tooth) AnnotationAssertion( "TODO - tooth numbering nomeculature to be aligned across species") AnnotationAssertion( "FMA:55815") AnnotationAssertion(Annotation( "FMA:55815") "lower second permanent molar tooth") AnnotationAssertion( "lower secondary molar 2") AnnotationAssertion(Annotation( "FMA:55815") "mandibular second secondary molar tooth") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0018579") AnnotationAssertion(rdfs:label "lower second secondary molar tooth") SubClassOf( ) SubClassOf( ) # Class: (lower third secondary molar tooth) AnnotationAssertion( "TODO - tooth numbering nomeculature to be aligned across species") AnnotationAssertion( "FMA:55817") AnnotationAssertion( "lower secondary molar 3") AnnotationAssertion(Annotation( "FMA:55817") "lower third permanent molar tooth") AnnotationAssertion(Annotation( "FMA:55817") "lower wisdom tooth") AnnotationAssertion(Annotation( "FMA:55817") "mandibular third secondary molar tooth") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:55817") "secondary third lower molar tooth") AnnotationAssertion( "UBERON:0018580") AnnotationAssertion(rdfs:label "lower third secondary molar tooth") SubClassOf( ) SubClassOf( ) # Class: (primary canine tooth) AnnotationAssertion( ) AnnotationAssertion( "FMA:84202") AnnotationAssertion(Annotation( "FMA:84202") "deciduous canine tooth") AnnotationAssertion(Annotation( "FMA:84202") "primary tooth C") AnnotationAssertion(Annotation( "FMA:84202") "temporary canine tooth") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0018583") AnnotationAssertion(rdfs:label "primary canine tooth") SubClassOf( ) SubClassOf( ) # Class: (secondary canine tooth) AnnotationAssertion( ) AnnotationAssertion( "FMA:84203") AnnotationAssertion(Annotation( "FMA:84203") "permanent canine tooth") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0018584") AnnotationAssertion(rdfs:label "secondary canine tooth") SubClassOf( ) SubClassOf( ) # Class: (upper first primary molar tooth) AnnotationAssertion( "TODO - tooth numbering nomeculature to be aligned across species") AnnotationAssertion( "FMA:84211") AnnotationAssertion(Annotation( "FMA:84211") "upper first deciduous molar tooth") AnnotationAssertion(Annotation( "FMA:84211") "upper primary tooth D") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0018588") AnnotationAssertion(rdfs:label "upper first primary molar tooth") SubClassOf( ) SubClassOf( ) SubClassOf( ) # Class: (lower first primary molar tooth) AnnotationAssertion( "TODO - tooth numbering nomeculature to be aligned across species") AnnotationAssertion( "FMA:84212") AnnotationAssertion(Annotation( "FMA:84212") "lower first deciduous molar tooth") AnnotationAssertion( "lower primary molar 1") AnnotationAssertion(Annotation( "FMA:84212") "lower primary tooth D") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0018589") AnnotationAssertion(rdfs:label "lower first primary molar tooth") SubClassOf( ) SubClassOf( ) # Class: (upper primary incisor tooth) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A primary incisor tooth that is part of a upper jaw region.") AnnotationAssertion( "FMA:84214") AnnotationAssertion(Annotation( "FMA:84214") "upper deciduous incisor tooth") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:84214") "deciduous upper incisor tooth") AnnotationAssertion( "UBERON:0018591") AnnotationAssertion(rdfs:label "upper primary incisor tooth") SubClassOf( ) SubClassOf( ) SubClassOf( ) # Class: (upper central primary incisor tooth) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A upper primary canine tooth that is in_the_central_side_of a dentition.") AnnotationAssertion( "FMA:84216") AnnotationAssertion(Annotation( "FMA:84216") "upper central deciduous incisor tooth") AnnotationAssertion(Annotation( "FMA:84216") "upper primary tooth A") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0018593") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "upper central primary incisor tooth") SubClassOf( ) SubClassOf( ) SubClassOf( ) # Class: (upper lateral primary incisor tooth) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A upper primary canine tooth that is in_the_lateral_side_of a dentition.") AnnotationAssertion( "FMA:84217") AnnotationAssertion(Annotation( "FMA:84217") "upper lateral deciduous incisor tooth") AnnotationAssertion(Annotation( "FMA:84217") "upper primary tooth B") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0018594") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "upper lateral primary incisor tooth") SubClassOf( ) SubClassOf( ) SubClassOf( ) # Class: (lower central primary incisor tooth) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A lower primary incisor tooth that is in_the_central_side_of a dentition.") AnnotationAssertion( "FMA:84218") AnnotationAssertion(Annotation( "FMA:84218") "lower central deciduous incisor tooth") AnnotationAssertion(Annotation( "FMA:84218") "lower primary tooth A") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:84218") "deciduous lower central incisor tooth") AnnotationAssertion( "UBERON:0018595") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "lower central primary incisor tooth") SubClassOf( ) SubClassOf( ) SubClassOf( ) # Class: (lower lateral primary incisor tooth) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A lower primary incisor tooth that is in_the_lateral_side_of a dentition.") AnnotationAssertion( "FMA:84219") AnnotationAssertion(Annotation( "FMA:84219") "lower lateral deciduous incisor tooth") AnnotationAssertion(Annotation( "FMA:84219") "lower primary tooth B") AnnotationAssertion( "mandibular lateral primary incisor") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:84219") "deciduous lower lateral incisor tooth") AnnotationAssertion( "UBERON:0018596") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "lower lateral primary incisor tooth") SubClassOf( ) SubClassOf( ) SubClassOf( ) # Class: (upper primary canine tooth) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A primary canine tooth that is part of a upper jaw region.") AnnotationAssertion( ) AnnotationAssertion( "FMA:84228") AnnotationAssertion(Annotation( "FMA:84228") "upper deciduous canine tooth") AnnotationAssertion(Annotation( "FMA:84228") "upper primary tooth C") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:84228") "deciduous upper canine tooth") AnnotationAssertion( "UBERON:0018597") AnnotationAssertion(rdfs:label "upper primary canine tooth") SubClassOf( ) SubClassOf( ) SubClassOf( ) # Class: (lower primary canine tooth) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A primary canine tooth that is part of a lower jaw region.") AnnotationAssertion( ) AnnotationAssertion( "FMA:84229") AnnotationAssertion(Annotation( "FMA:84229") "lower deciduous canine tooth") AnnotationAssertion(Annotation( "FMA:84229") "lower primary tooth C") AnnotationAssertion( "primary lower canine tooth") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:84229") "deciduous lower canine tooth") AnnotationAssertion( "UBERON:0018598") AnnotationAssertion(rdfs:label "lower primary canine tooth") SubClassOf( ) SubClassOf( ) SubClassOf( ) # Class: (upper second primary molar tooth) AnnotationAssertion( "TODO - tooth numbering nomeculature to be aligned across species") AnnotationAssertion( "FMA:84236") AnnotationAssertion(Annotation( "FMA:84236") "upper primary tooth E") AnnotationAssertion(Annotation( "FMA:84236") "upper second deciduous molar tooth") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0018599") AnnotationAssertion(rdfs:label "upper second primary molar tooth") SubClassOf( ) SubClassOf( ) # Class: (lower second primary molar tooth) AnnotationAssertion( "TODO - tooth numbering nomeculature to be aligned across species") AnnotationAssertion( "FMA:84237") AnnotationAssertion(Annotation( "FMA:84237") "lower primary tooth E") AnnotationAssertion(Annotation( "FMA:84237") "lower second deciduous molar tooth") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0018600") AnnotationAssertion(rdfs:label "lower second primary molar tooth") SubClassOf( ) SubClassOf( ) # Class: (lower central incisor tooth) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An incisor tooth that is in_the_central_side_of a dentition and is part of a lower jaw region.") AnnotationAssertion( "FMA:290182") AnnotationAssertion( "lower central incisor") AnnotationAssertion( "mandibular central incisor") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0018601") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "lower central incisor tooth") SubClassOf( ) SubClassOf( ) # Class: (lower lateral incisor tooth) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An incisor tooth that is in_the_lateral_side_of a dentition and is part of a lower jaw region.") AnnotationAssertion( "FMA:290197") AnnotationAssertion( "lower lateral incisor") AnnotationAssertion( "mandibular lateral incisor") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0018602") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "lower lateral incisor tooth") SubClassOf( ) SubClassOf( ) # Class: (upper central incisor tooth) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An incisor tooth that is in_the_central_side_of a dentition and is part of a upper jaw region.") AnnotationAssertion( "FMA:290180") AnnotationAssertion( "maxillary central incisor") AnnotationAssertion( "upper central incisor") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0018603") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "upper central incisor tooth") SubClassOf( ) SubClassOf( ) # Class: (upper lateral incisor tooth) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An incisor tooth that is in_the_lateral_side_of a dentition and is part of a upper jaw region.") AnnotationAssertion( "FMA:290194") AnnotationAssertion( "maxillary lateral incisor") AnnotationAssertion( "upper lateral incisor") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0018604") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "upper lateral incisor tooth") SubClassOf( ) SubClassOf( ) # Class: (molar tooth 2) AnnotationAssertion(Annotation( "UBERON:cjm"^^xsd:string) "The molar tooth of the upper or lower jaw that is phylogenetically number 2.") AnnotationAssertion( ) AnnotationAssertion( "FMA:321613") AnnotationAssertion( "molar 2") AnnotationAssertion( "molar 2 tooth") AnnotationAssertion( "second molar tooth") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0018606") AnnotationAssertion(rdfs:label "molar tooth 2") SubClassOf( ) # Class: (permanent molar tooth 2) AnnotationAssertion( ) AnnotationAssertion( "permanent second molar tooth") AnnotationAssertion( "second permanent molar") AnnotationAssertion( "second permanent molar tooth") AnnotationAssertion( "secondary second molar tooth") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0018607") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "permanent molar tooth 2") SubClassOf( ) SubClassOf( ) # Class: (permanent molar tooth 1) AnnotationAssertion( ) AnnotationAssertion( "first permanent molar") AnnotationAssertion( "first permanent molar tooth") AnnotationAssertion( "permanent first molar tooth") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0018608") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "permanent molar tooth 1") SubClassOf( ) SubClassOf( ) # Class: (secondary upper tooth) AnnotationAssertion( ) AnnotationAssertion( "permanent upper tooth") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0018613") AnnotationAssertion(rdfs:label "secondary upper tooth") SubClassOf( ) SubClassOf( ) # Class: (permanent lower tooth) AnnotationAssertion( ) AnnotationAssertion( "secondary lower tooth") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0018614") AnnotationAssertion(rdfs:label "permanent lower tooth") SubClassOf( ) SubClassOf( ) # Class: (primary upper tooth) AnnotationAssertion( ) AnnotationAssertion( "deciduous upper tooth") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0018616") AnnotationAssertion(rdfs:label "primary upper tooth") SubClassOf( ) SubClassOf( ) # Class: (primary lower tooth) AnnotationAssertion( ) AnnotationAssertion( "deciduous lower tooth") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0018617") AnnotationAssertion(rdfs:label "primary lower tooth") SubClassOf( ) SubClassOf( ) # Class: (upper canine tooth) AnnotationAssertion( "maxillary canine tooth") AnnotationAssertion( "upper canine") AnnotationAssertion( "upper cuspid") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0018621") AnnotationAssertion(rdfs:label "upper canine tooth") SubClassOf( ) SubClassOf( ) # Class: (lower canine tooth) AnnotationAssertion( "lower canine") AnnotationAssertion( "lower cuspid") AnnotationAssertion( "mandibular canine tooth") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0018622") AnnotationAssertion(rdfs:label "lower canine tooth") SubClassOf( ) SubClassOf( ) # Class: (lower secondary incisor tooth) AnnotationAssertion( "FMA:55713") AnnotationAssertion(Annotation( "FMA:55713") "lower permanent incisor tooth") AnnotationAssertion(Annotation( "FMA:55713") "mandibular secondary incisor tooth") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:55713") "permanent lower incisor tooth") AnnotationAssertion( "UBERON:0018623") AnnotationAssertion(rdfs:label "lower secondary incisor tooth") SubClassOf( ) SubClassOf( ) SubClassOf( ) # Class: (obsolete upper primary canine tooth) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0018632") AnnotationAssertion(rdfs:label "obsolete upper primary canine tooth") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (premolar 2) AnnotationAssertion( ) AnnotationAssertion( "second premolar tooth") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0018640") AnnotationAssertion(rdfs:label "premolar 2") SubClassOf( ) # Class: (deciduous molar tooth 2) AnnotationAssertion( ) AnnotationAssertion( "deciduous second molar tooth") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0018643") AnnotationAssertion(rdfs:label "deciduous molar tooth 2") SubClassOf( ) SubClassOf( ) # Class: (deciduous molar tooth 1) AnnotationAssertion( ) AnnotationAssertion( "deciduous first molar tooth") AnnotationAssertion( "deciduous molar 1") AnnotationAssertion( "first temporarary molar") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0018644") AnnotationAssertion(rdfs:label "deciduous molar tooth 1") SubClassOf( ) SubClassOf( ) # Class: (incisor region of dentition) AnnotationAssertion(Annotation( ) "The subdivision of the dentition that consists entire of incisor teeth.") AnnotationAssertion( "uberon") AnnotationAssertion( "set of incisors") AnnotationAssertion( "UBERON:0018645") AnnotationAssertion(rdfs:label "incisor region of dentition") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (premolar tooth 5) AnnotationAssertion(Annotation( "UBERON:cjm"^^xsd:string) "The premolar tooth of the upper or lower jaw that is phylogenetically number 5.") AnnotationAssertion( "premolar 5") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "d5") AnnotationAssertion( "UBERON:0018646") AnnotationAssertion(rdfs:label "premolar tooth 5") SubClassOf( ) # Class: (premolar tooth 4) AnnotationAssertion(Annotation( "UBERON:cjm"^^xsd:string) "The premolar tooth of the upper or lower jaw that is phylogenetically number 4.") AnnotationAssertion( "premolar 4") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "d4") AnnotationAssertion( "UBERON:0018647") AnnotationAssertion(rdfs:label "premolar tooth 4") SubClassOf( ) # Class: (upper premolar 4) AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "MURDOCH:2142") "carnassial tooth") AnnotationAssertion( "UBERON:0018648") AnnotationAssertion(rdfs:comment "Often called the carnassial tooth, this tooth acts with its counterpart in the lower jaw (the 1st molar in that case) to slice food in a scissoring action.[MURDOCH:2142]") AnnotationAssertion(rdfs:label "upper premolar 4") SubClassOf( ) SubClassOf( ) # Class: (cardiac muscle tissue of ventricle) AnnotationAssertion( "FMA:83450") AnnotationAssertion(Annotation( ) "ventricular cardiac muscle tissue") AnnotationAssertion(Annotation( ) "ventricular heart muscle") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "ventricular muscle") AnnotationAssertion( "UBERON:0018649") AnnotationAssertion(rdfs:label "cardiac muscle tissue of ventricle") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (foramen lacerum) AnnotationAssertion(Annotation( ) "A triangular hole in the base of the skull located at the base of the medial pterygoid plate.") AnnotationAssertion( "For comparative reasons this term can only be used for the opening between the Os temporale, Os basisphenoidale, and Os occipitale (formerly the Foramen lacerum orale of the pig and horse). That which was formerly called Foramen lacerum aborale is the Foramen jugulare [NOMINA ANATOMICA VETERINARIA (2005)]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:54809") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0018651") AnnotationAssertion(rdfs:label "foramen lacerum") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (anterior ethmoidal foramen) AnnotationAssertion(Annotation( ) "The anterior ethmoidal foramen, situated about the middle of the lateral margin of the olfactory groove, transmits the anterior ethmoidal vessels and the anterior ethmoidal nerve; the nerve runs in a groove along the lateral edge of the cribriform plate to the slit-like opening above mentioned.") AnnotationAssertion( ) AnnotationAssertion( "FMA:53135") AnnotationAssertion(Annotation( ) "foramina ethmoidalia anterius") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0018653") AnnotationAssertion(rdfs:label "anterior ethmoidal foramen") SubClassOf(Annotation( "FMA"^^xsd:string) ) DisjointClasses(Annotation( "lexical"^^xsd:string) ) # Class: (posterior ethmoidal foramen) AnnotationAssertion(Annotation( ) "The posterior ethmoidal foramen opens at the back part of this margin under cover of the projecting lamina of the sphenoid, and transmits the posterior ethmoidal vessels and nerve.") AnnotationAssertion( ) AnnotationAssertion( "FMA:53136") AnnotationAssertion(Annotation( ) "foramina ethmoidalia posterius") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0018654") AnnotationAssertion(rdfs:label "posterior ethmoidal foramen") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (pars endotympanica) AnnotationAssertion(Annotation( ) "This is present in the cat and forms the large medial part of the Bulla tympanica. It is not to be regarded as a part of the pars tympanica, which ossifies directly from connective tissue, whereas the Pars endotympanica is preformed in cartilage. The Septum bullae in the cat is formed by the Pars tympanica as well as by the Pars endotympanica(NOMINA ANATOMICA VETERINARIA (2005)).") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0018655") AnnotationAssertion(rdfs:label "pars endotympanica") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (neck of bone element) AnnotationAssertion(Annotation( ) "The neck region of a bone organ.") AnnotationAssertion( "bone neck") AnnotationAssertion( "neck of bone") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0018664") AnnotationAssertion(rdfs:label "neck of bone element") SubClassOf( ) SubClassOf(Annotation( "https://github.com/obophenotype/uberon/wiki/Hidden-GCIs") ) # Class: (neck of scapula) AnnotationAssertion( ) AnnotationAssertion( "FMA:23254") AnnotationAssertion(Annotation( "FMA:23254") "anatomical neck of scapula") AnnotationAssertion(Annotation( "FMA:23254") "scapular neck") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0018667") AnnotationAssertion(rdfs:label "neck of scapula") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete neck of humerus) AnnotationAssertion( "UBERON:4200172") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0018669") AnnotationAssertion(rdfs:label "obsolete neck of humerus") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (neck of fibula) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37891") AnnotationAssertion( "FMA:35508") AnnotationAssertion(Annotation( "FMA:35508") "fibula neck") AnnotationAssertion( "fibular neck") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0018673") AnnotationAssertion(rdfs:label "neck of fibula") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (heart vasculature) AnnotationAssertion(Annotation( "ZFA:0005811") Annotation( "ZFA:CVS") "An interconnected tubular multi-tissue structure that contains fluid that is actively transported around the heart.") AnnotationAssertion( "FMA:73747") AnnotationAssertion( "ZFA:0005811") AnnotationAssertion(Annotation( "FMA:73747") "cardiac vasculature") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0018674") AnnotationAssertion(rdfs:label "heart vasculature") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pelvic splanchnic nerve) AnnotationAssertion(Annotation( ) "A splanchnic nerves that arises from sacral spinal nerves S2, S3, S4 to provide parasympathetic innervation to the hindgut.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0001432") AnnotationAssertion( "EHDAA:5628") AnnotationAssertion( "FMA:16901") AnnotationAssertion(Annotation( "EHDAA2:0001432") "pelvic splanchnic parasympathetic nerve") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "nervi erigentes") AnnotationAssertion(Annotation( ) Annotation( ) "nervi pelvici splanchnici") AnnotationAssertion(Annotation( ) "nervi splanchnici pelvici") AnnotationAssertion(Annotation( ) "nn erigentes") AnnotationAssertion(Annotation( ) "pelvic splanchnic nerve") AnnotationAssertion( "UBERON:0018675") AnnotationAssertion(rdfs:label "pelvic splanchnic nerve") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ) # Class: (renal nerve plexus) AnnotationAssertion(Annotation( ) "The renal plexus is formed by filaments from the celiac plexus, the aorticorenal ganglion, and the aortic plexus . It is joined also by the least splanchnic nerve. The nerves from these sources, fifteen or twenty in number, have a few ganglia developed upon them. They accompany the branches of the renal artery into the kidney; some filaments are distributed to the spermatic plexus and, on the right side, to the inferior vena cava.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:6636") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) "plexus renalis") AnnotationAssertion(Annotation( "FMA:6636") "renal plexus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0018676") AnnotationAssertion(rdfs:label "renal nerve plexus") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (thoracic splanchnic nerve) AnnotationAssertion(Annotation( ) "Thoracic splanchnic nerves are splanchnic nerves that arise from the sympathetic trunk in the thorax and travel inferiorly to provide sympathetic innervation to the abdomen. The nerves contain preganglionic sympathetic and general visceral afferent fibers.") AnnotationAssertion( ) AnnotationAssertion( "FMA:6280") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0018679") AnnotationAssertion(rdfs:label "thoracic splanchnic nerve") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (greater splanchnic nerve) AnnotationAssertion( ) AnnotationAssertion( "FMA:6281") AnnotationAssertion(Annotation( "FMA:6281") "greater thoracic splanchnic nerve") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0018680") AnnotationAssertion(rdfs:comment "The nerve travels through the diaphragm and enters the abdominal cavity, where its fibers synapse at the celiac ganglia. The nerve contributes to the celiac plexus, a network of nerves located in the vicinity of where the celiac trunk branches from the abdominal aorta. The fibers in this nerve modulate the activity of the enteric nervous system of the foregut. They also provide the sympathetic innervation to the adrenal medulla, stimulating catecholamine release.") AnnotationAssertion(rdfs:label "greater splanchnic nerve") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (lesser splanchnic nerve) AnnotationAssertion( ) AnnotationAssertion( "FMA:6282") AnnotationAssertion(Annotation( "FMA:6282") "lesser thoracic splanchnic nerve") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0018681") AnnotationAssertion(rdfs:comment "The nerve travels inferiorly, lateral to the greater splanchnic nerve. Its fibers synapse with their postganglionic counterparts in the superior mesenteric ganglia, or in the aorticorenal ganglion. The nerve modulates the activity of the enteric nervous system of the midgut.") AnnotationAssertion(rdfs:label "lesser splanchnic nerve") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (lumbar splanchnic nerve) AnnotationAssertion(Annotation( ) "The lumbar splanchnic nerves are splanchnic nerves that arise from the lumbar part of the sympathetic trunk and travel to an adjacent plexus near the aorta. They are originated from L1 and L2. These nerves contain preganglionic sympathetic and visceral afferent fibers. The site of synapse is found in the prevertebral ganglia and innervate the smooth muscle and glands of the pelvic viscera and hindgut.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:6287") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "lumbar splanchnic nerve") AnnotationAssertion( "UBERON:0018683") AnnotationAssertion(rdfs:label "lumbar splanchnic nerve") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (sacral splanchnic nerve) AnnotationAssertion(Annotation( ) "A splanchnic nerve that connects the inferior hypogastric plexus to the sympathetic trunk in the pelvis.") AnnotationAssertion( ) AnnotationAssertion( "FMA:6288") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0018684") AnnotationAssertion(rdfs:label "sacral splanchnic nerve") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (nursing stage) AnnotationAssertion(Annotation( "Bgee:AN") "A mammalian developmental stage that covers the period from birth until weaning.") AnnotationAssertion( "suckling stage") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0018685") AnnotationAssertion(rdfs:label "nursing stage") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (glial limiting membrane) AnnotationAssertion(Annotation( ) "The meshwork of astrocytic foot processes (glial end feet) covered by a basal lamina adjacent to the inner pial surface of the central nervous system.") AnnotationAssertion( ) AnnotationAssertion( "NIF_Subcellular:nlx_subcell_100209") AnnotationAssertion(Annotation( ) Annotation( ) "glia limitans") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0018687") AnnotationAssertion(rdfs:label "glial limiting membrane") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (bladder organ) AnnotationAssertion(Annotation( "BTO:0000123") "A membranous sac in animals that serves as the receptacle of a liquid or contains gas.") AnnotationAssertion( "BTO:0000123") AnnotationAssertion(Annotation( "BTO:0000123") "bladder") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0018707") AnnotationAssertion(rdfs:label "bladder organ") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (reproductive system mucosa) AnnotationAssertion( "BTO:0002439") AnnotationAssertion(Annotation( "BTO:0002439") "genital mucosa") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0019042") AnnotationAssertion(rdfs:label "reproductive system mucosa") SubClassOf( ) SubClassOf( ) # Class: (intramuscular adipose tissue) AnnotationAssertion(Annotation( "BTO:0004043") "Adipose tissue which is located throughout skeletal muscle and is responsible for the marbling seen in certain cuts of beef. In humans, excess accumulation of intramuscular fat is associated with insulin resistance and type 2 diabetes.") AnnotationAssertion( "BTO:0004043") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0004043") "intramuscular fat") AnnotationAssertion( "UBERON:0019143") AnnotationAssertion(rdfs:label "intramuscular adipose tissue") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (carotid artery endothelium) AnnotationAssertion( "BTO:0004626") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0004626") "carotid endothelium") AnnotationAssertion( "carotid epithelium") AnnotationAssertion( "UBERON:0019189") AnnotationAssertion(rdfs:label "carotid artery endothelium") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (mucous gland of lung) AnnotationAssertion( ) AnnotationAssertion( "BTO:0004638") AnnotationAssertion( "FMA:13119") AnnotationAssertion(Annotation( "FMA:13119") "bronchial gland") AnnotationAssertion(Annotation( "FMA:13119") "bronchial mucous gland") AnnotationAssertion(Annotation( "BTO:0004638") "peribronchial gland") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0019190") AnnotationAssertion(rdfs:label "mucous gland of lung") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (iliac artery endothelium) AnnotationAssertion( "BTO:0004661") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0019196") AnnotationAssertion(rdfs:label "iliac artery endothelium") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (dorsal nerve of penis) AnnotationAssertion(Annotation( ) Annotation( ) "The deep terminal division of the pudendal nerve that runs along the dorsum of the penis and innervates the the corpus cavernosum penis, the prepuce and the glans penis.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:21869") AnnotationAssertion(Annotation( "FMA:21869") Annotation( ) "nervus dorsalis penis") AnnotationAssertion(Annotation( "FMA:21869") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "nervus dorsalis penis ") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "dorsal nerve of penis") AnnotationAssertion(Annotation( ) "dorsal nerves of the penis") AnnotationAssertion( "UBERON:0019197") AnnotationAssertion(rdfs:label "dorsal nerve of penis") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (dorsal nerve of clitoris) AnnotationAssertion(Annotation( ) Annotation( ) "The deep terminal division of the pudendal nerve that runs along the dorsum of the clitoral shaft and innervates the the glans clitoris.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:21870") AnnotationAssertion(Annotation( "FMA:21870") "nervus dorsalis clitoridis") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "dorsal nerve of the clitoris") AnnotationAssertion( "UBERON:0019198") AnnotationAssertion(rdfs:label "dorsal nerve of clitoris") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lateral side of chest) AnnotationAssertion( ) AnnotationAssertion( "side of chest") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0019199") AnnotationAssertion(rdfs:label "lateral side of chest") SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (skin of anterior chest) AnnotationAssertion(Annotation( ) "Zone of skin that is part of the anterior region of the chest.") AnnotationAssertion( "FMA:10461") AnnotationAssertion(Annotation( "FMA:10461") "anterior chest skin") AnnotationAssertion(Annotation( "FMA:10461") "skin of anterior part of thorax") AnnotationAssertion(Annotation( "HP:0007542") "skin of ventral chest") AnnotationAssertion(Annotation( "HP:0007542") "ventral chest skin") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0019200") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "skin of anterior chest") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (gemellus muscle) AnnotationAssertion(Annotation( ) Annotation( ) "One of the two small muscular fasciculi, accessories to the tendon of the Obturator internus which is received into a groove between them.") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:36227") AnnotationAssertion( "FMA:22319") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0019201") AnnotationAssertion(rdfs:label "gemellus muscle") SubClassOf(Annotation( "EMAPA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (inferior gemellus muscle) AnnotationAssertion(Annotation( ) "Gemellus muscle that arises from the upper part of the tuberosity of the ischium, immediately below the groove for the Obturator internus tendon. It blends with the lower part of the tendon of the Obturator internus, and is inserted with it into the medial surface of the greater trochanter.") AnnotationAssertion( "Rarely absent in humans") AnnotationAssertion( ) AnnotationAssertion( "EMAPA:36228") AnnotationAssertion( "FMA:22320") AnnotationAssertion(Annotation( "EMAPA:36228") "gemellus inferior") AnnotationAssertion(Annotation( "FMA:22320") "inferior gemellus") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) Annotation( ) "musculus gemellus inferior") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "gemellus inferior") AnnotationAssertion(Annotation( ) "gemellus inferior muscle") AnnotationAssertion( "UBERON:0019202") AnnotationAssertion(rdfs:label "inferior gemellus muscle") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (superior gemellus muscle) AnnotationAssertion(Annotation( ) "The smaller of the two gemellus muscles that arises from the outer surface of the spine of the ischium, blends with the upper part of the tendon of the Obturator internus, and is inserted with it into the medial surface of the greater trochanter[WP].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:36229") AnnotationAssertion( "FMA:22318") AnnotationAssertion(Annotation( "EMAPA:36229") "gemellus superior") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) Annotation( ) "musculus gemellus superior") AnnotationAssertion(Annotation( "FMA:22318") "superior gemellus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "cemellus superior") AnnotationAssertion(Annotation( ) "gemellus superior") AnnotationAssertion(Annotation( ) "gemellus superior muscle") AnnotationAssertion(Annotation( ) "superior cemellus") AnnotationAssertion(Annotation( ) "superior cemellus muscle") AnnotationAssertion(Annotation( ) "superior gemellus") AnnotationAssertion( "UBERON:0019203") AnnotationAssertion(rdfs:label "superior gemellus muscle") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (skin epithelium) AnnotationAssertion(Annotation( ) "Any region of epithelium that is part of a skin region.") AnnotationAssertion( "BTO:0004382") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0019204") AnnotationAssertion(rdfs:label "skin epithelium") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (tongue papilla epithelium) AnnotationAssertion( "EMAPA:35869") AnnotationAssertion( "MA:0003178") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0019206") AnnotationAssertion(rdfs:label "tongue papilla epithelium") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (chorioretinal region) AnnotationAssertion(Annotation( ) Annotation( "UBERON:drseb") "The part of the eye that consists of both the retina and the optic choroid.") AnnotationAssertion( ) AnnotationAssertion( "chorioretina") AnnotationAssertion( "choroid and retina") AnnotationAssertion( "retinachoroid") AnnotationAssertion( "retinachoroidal region") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0019207") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "chorioretinal region") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (anterior pole of lens) AnnotationAssertion(Annotation( ) "The central point on the anterior surface of the lens.") AnnotationAssertion( ) AnnotationAssertion( "FMA:58897") AnnotationAssertion( "NCIT:C32103") AnnotationAssertion(Annotation( "FMA:58897") "polus anterior (lens)") AnnotationAssertion(Annotation( ) "polus anterior lentis") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0019208") AnnotationAssertion(rdfs:label "anterior pole of lens") SubClassOf( ) # Class: (pole of lens) AnnotationAssertion(Annotation( ) "A central point or region on the anterior or posterior surface of the lens.") AnnotationAssertion( ) AnnotationAssertion( "FMA:58067") AnnotationAssertion( "lens pole") AnnotationAssertion(Annotation( "FMA:58067") "lens zone") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:58067") "zone of lens") AnnotationAssertion( "UBERON:0019210") AnnotationAssertion(rdfs:label "pole of lens") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (supcapsular region of anterior region of lens) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0019211") AnnotationAssertion(rdfs:comment "See https://github.com/obophenotype/uberon/issues/599") AnnotationAssertion(rdfs:label "supcapsular region of anterior region of lens") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (supcapsular region of posterior region of lens) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0019212") AnnotationAssertion(rdfs:comment "See https://github.com/obophenotype/uberon/issues/599") AnnotationAssertion(rdfs:label "supcapsular region of posterior region of lens") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (digit 1 or 5) AnnotationAssertion(Annotation( "UBERON:cjm"^^xsd:string) "Either of the outermost digits in a five-digit autopod, or their phylogenetic equivalent.") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "lateral digit") AnnotationAssertion(Annotation( ) "outer digit") AnnotationAssertion(Annotation( ) "outermost digit") AnnotationAssertion( "UBERON:0019221") AnnotationAssertion(rdfs:label "digit 1 or 5") AnnotationAssertion(rdfs:seeAlso "https://github.com/obophenotype/uberon/issues/592"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) # Class: (digit 2, 3 or 4) AnnotationAssertion(Annotation( "UBERON:cjm"^^xsd:string) "Any of the three medial digits in a five-digit autopod, or their phylogenetic equivalent.") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "medial digit") AnnotationAssertion(Annotation( ) "mesoaxial digit") AnnotationAssertion( "UBERON:0019222") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "digit 2, 3 or 4") AnnotationAssertion(rdfs:seeAlso "https://github.com/obophenotype/uberon/issues/592"^^xsd:anyURI) SubClassOf( ) # Class: (manual digit 1 or 5) AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "lateral finger") AnnotationAssertion(Annotation( ) "lateral manual digit") AnnotationAssertion(Annotation( ) "outer manual digit") AnnotationAssertion(Annotation( ) "outermost manual digit") AnnotationAssertion( "UBERON:0019231") AnnotationAssertion(rdfs:label "manual digit 1 or 5") AnnotationAssertion(rdfs:seeAlso "https://github.com/obophenotype/uberon/issues/592"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) # Class: (manual digit 2, 3 or 4) AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "medial manual digit") AnnotationAssertion(Annotation( ) "mesoaxial manual digit") AnnotationAssertion(Annotation( ) "mesoxaxial finger") AnnotationAssertion( "UBERON:0019232") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "manual digit 2, 3 or 4") AnnotationAssertion(rdfs:seeAlso "https://github.com/obophenotype/uberon/issues/592"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) # Class: (pedal digit 1 or 5) AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "lateral pedal digit") AnnotationAssertion(Annotation( ) "lateral toe") AnnotationAssertion(Annotation( ) "outer pedal digit") AnnotationAssertion(Annotation( ) "outermost pedal digit") AnnotationAssertion( "UBERON:0019241") AnnotationAssertion(rdfs:label "pedal digit 1 or 5") AnnotationAssertion(rdfs:seeAlso "https://github.com/obophenotype/uberon/issues/592"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) # Class: (pedal digit 2, 3 or 4) AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "medial pedal digit") AnnotationAssertion(Annotation( ) "mesoaxial pedal digit") AnnotationAssertion(Annotation( ) "mesoxaxial ftoe") AnnotationAssertion( "UBERON:0019242") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "pedal digit 2, 3 or 4") AnnotationAssertion(rdfs:seeAlso "https://github.com/obophenotype/uberon/issues/592"^^xsd:anyURI) SubClassOf( ) SubClassOf( ) # Class: (skin crease) AnnotationAssertion( ) AnnotationAssertion( "uberon") AnnotationAssertion( "skin groove") AnnotationAssertion( "UBERON:0019243") AnnotationAssertion(rdfs:label "skin crease") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (palmar skin crease) AnnotationAssertion( ) AnnotationAssertion( "skin crease of palmar part of manus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0019246") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "palmar skin crease") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (plantar skin crease) AnnotationAssertion( ) AnnotationAssertion( "skin crease of plantar part of pes") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0019247") AnnotationAssertion(rdfs:label "plantar skin crease") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (early embryo) AnnotationAssertion( "EMAPA:36032") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0019248") AnnotationAssertion(rdfs:label "early embryo") SubClassOf( ) # Class: (2-cell stage embryo) AnnotationAssertion( "EMAPA:16036") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "EMAPA:16036") "2-cell embryo") AnnotationAssertion(Annotation( "EMAPA:16036") "two-cell embryo") AnnotationAssertion( "UBERON:0019249") AnnotationAssertion(rdfs:label "2-cell stage embryo") SubClassOf(Annotation( "EMAPA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (4-8 cell stage embryo) AnnotationAssertion( "EMAPA:16037") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "EMAPA:16037") "4-8 cell embryo") AnnotationAssertion(Annotation( "EMAPA:16037") "four-to-eight cell embryo") AnnotationAssertion( "UBERON:0019250") AnnotationAssertion(rdfs:label "4-8 cell stage embryo") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (4-cell stage embryo) AnnotationAssertion( "EMAPA:31864") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "EMAPA:31864") "4-cell embryo") AnnotationAssertion(Annotation( "EMAPA:31864") "four-cell embryo") AnnotationAssertion( "UBERON:0019251") AnnotationAssertion(rdfs:label "4-cell stage embryo") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (8-cell stage embryo) AnnotationAssertion( "EMAPA:31865") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "EMAPA:31865") "8-cell embryo") AnnotationAssertion(Annotation( "EMAPA:31865") "eight-cell embryo") AnnotationAssertion( "UBERON:0019252") AnnotationAssertion(rdfs:label "8-cell stage embryo") SubClassOf(Annotation( "EMAPA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (upper secondary incisor tooth) AnnotationAssertion( "FMA:55712") AnnotationAssertion(Annotation( "FMA:55712") "maxillary secondary incisor tooth") AnnotationAssertion( "upper permanent incisor") AnnotationAssertion(Annotation( "FMA:55712") "upper permanent incisor tooth") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0019253") AnnotationAssertion(rdfs:label "upper secondary incisor tooth") SubClassOf( ) SubClassOf( ) SubClassOf( ) # Class: (upper eyelash) AnnotationAssertion( "FMA:59408") AnnotationAssertion(Annotation( "FMA:59408") "eyelash of upper eyelid") AnnotationAssertion( "upper eyelid cilium") AnnotationAssertion(Annotation( "FMA:59408") "upper eyelid eyelash") AnnotationAssertion( "uberon") AnnotationAssertion( "hair of upper eyelid") AnnotationAssertion(Annotation( ) "upper eyelid cilia") AnnotationAssertion( "UBERON:0019254") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "upper eyelash") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lower eyelash) AnnotationAssertion( "FMA:59409") AnnotationAssertion(Annotation( "FMA:59409") "eyelash of lower eyelid") AnnotationAssertion( "lower eyelid cilium") AnnotationAssertion(Annotation( "FMA:59409") "lower eyelid eyelash") AnnotationAssertion( "uberon") AnnotationAssertion( "hair of lower eyelid") AnnotationAssertion(Annotation( ) "lower eyelid cilia") AnnotationAssertion( "UBERON:0019255") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "lower eyelash") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (white matter of hindbrain) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A white matter that is part of the hindbrain.") AnnotationAssertion( "DHBA:10668") AnnotationAssertion( "FMA:268636") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0019258") AnnotationAssertion(rdfs:label "white matter of hindbrain") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (white matter of forebrain) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A white matter that is part of the forebrain.") AnnotationAssertion( "DHBA:10557") AnnotationAssertion( "FMA:268634") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0019261") AnnotationAssertion(rdfs:label "white matter of forebrain") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (white matter of myelencephalon) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A white matter that is part of the myelencephalon.") AnnotationAssertion( "HBA:9298") AnnotationAssertion(Annotation( "HBA:MYWM") "myelencephalic white matter") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0019262") AnnotationAssertion(rdfs:label "white matter of myelencephalon") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (gray matter of hindbrain) AnnotationAssertion( "DHBA:10654") AnnotationAssertion( "FMA:268630") AnnotationAssertion(Annotation( "DHBA:HGM") "gray matter of the hindbrain") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0019263") AnnotationAssertion(rdfs:label "gray matter of hindbrain") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (gray matter of forebrain) AnnotationAssertion( "DHBA:10157") AnnotationAssertion( "FMA:268608") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0019264") AnnotationAssertion(rdfs:label "gray matter of forebrain") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (gray matter of midbrain) AnnotationAssertion( "DHBA:10649") AnnotationAssertion( "FMA:83913") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0019267") AnnotationAssertion(rdfs:label "gray matter of midbrain") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (gray matter of diencephalon) AnnotationAssertion( "FMA:83912") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0019269") AnnotationAssertion(rdfs:label "gray matter of diencephalon") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (mesomere 1) AnnotationAssertion( "DHBA:12316") AnnotationAssertion( "DMBA:16650") AnnotationAssertion( "EHDAA2:0004353") AnnotationAssertion(Annotation( "EHDAA2:0004353") "mesomere M1") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0019272") AnnotationAssertion(rdfs:label "mesomere 1") SubClassOf( ) # Class: (mesomere 2) AnnotationAssertion( "DHBA:12317") AnnotationAssertion( "DMBA:16751") AnnotationAssertion( "EHDAA2:0004354") AnnotationAssertion(Annotation( "DMBA:m2") "mesomere 2 (preisthmus or caudal midbrain)") AnnotationAssertion(Annotation( "EHDAA2:0004354") "mesomere M2") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0019274") AnnotationAssertion(rdfs:label "mesomere 2") SubClassOf( ) # Class: (uncinate fasciculus of the forebrain) AnnotationAssertion(Annotation( "NLX:98733") "A fiber pathway in the cerebral white matter that connects anterior portions of the temporal lobe with the inferior frontal gyrus and the middle frontal gyrus. It is not readily distinguished in myelin-stained cross-sections (adapted from Brain Info).") AnnotationAssertion( ) AnnotationAssertion( "HBA:9284") AnnotationAssertion( "NLX:98733") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:1444") "uncinate fasciculus of cerebral hemisphere") AnnotationAssertion( "UBERON:0019275") AnnotationAssertion(rdfs:label "uncinate fasciculus of the forebrain") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "HBA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (inferior rostral gyrus) AnnotationAssertion( "BIRNLEX:1447") AnnotationAssertion( "DHBA:12130") AnnotationAssertion( "HBA:4900") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0019278") AnnotationAssertion(rdfs:label "inferior rostral gyrus") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "DHBA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (superior rostral gyrus) AnnotationAssertion( "BIRNLEX:1311") AnnotationAssertion( "DHBA:12129") AnnotationAssertion( "HBA:4897") AnnotationAssertion(Annotation( "BIRNLEX:1311") "superior rostral gyrus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0019279") AnnotationAssertion(rdfs:label "superior rostral gyrus") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "DHBA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (rostral gyrus) AnnotationAssertion( "DHBA:146034876") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0019280") AnnotationAssertion(rdfs:label "rostral gyrus") SubClassOf( ) SubClassOf(Annotation( "DHBA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (lateral longitudinal stria) AnnotationAssertion( ) AnnotationAssertion( "DHBA:12064") AnnotationAssertion( "FMA:62439") AnnotationAssertion( "HBA:265505146") AnnotationAssertion(Annotation( "FMA:62439") "lateral white stria of lancisi") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0019283") AnnotationAssertion(rdfs:label "lateral longitudinal stria") SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) DisjointClasses(Annotation( "lexical"^^xsd:string) ) # Class: (rhombomere 9) AnnotationAssertion( "DMBA:17476") AnnotationAssertion(Annotation( "DMBA:r9") Annotation( ) "r9") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0019284") AnnotationAssertion(rdfs:label "rhombomere 9") SubClassOf( ) # Class: (rhombomere 10) AnnotationAssertion( "DMBA:17538") AnnotationAssertion(Annotation( "DMBA:r10") Annotation( ) "r10") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0019285") AnnotationAssertion(rdfs:label "rhombomere 10") SubClassOf( ) # Class: (rhombomere 11) AnnotationAssertion( "DMBA:17596") AnnotationAssertion(Annotation( "DMBA:r11") Annotation( ) "r11") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0019286") AnnotationAssertion(rdfs:label "rhombomere 11") SubClassOf( ) # Class: (accessory olfactory bulb external plexiform layer) AnnotationAssertion( "DMBA:15965") AnnotationAssertion( "EMAPA:35107") AnnotationAssertion( "MA:0002932") AnnotationAssertion(Annotation( "DMBA:AOPl") "AOB, outer plexiform layer") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0019289") AnnotationAssertion(rdfs:label "accessory olfactory bulb external plexiform layer") SubClassOf( ) SubClassOf(Annotation( "MA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (accessory olfactory bulb internal plexiform layer) AnnotationAssertion( "DMBA:15962") AnnotationAssertion( "EMAPA:35110") AnnotationAssertion( "MA:0002934") AnnotationAssertion(Annotation( "DMBA:AIPl") "AOB, internal plexiform layer") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0019290") AnnotationAssertion(rdfs:label "accessory olfactory bulb internal plexiform layer") SubClassOf( ) SubClassOf(Annotation( "MA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (white matter of metencephalon) AnnotationAssertion( "FMA:83939") AnnotationAssertion( "HBA:9287") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0019291") AnnotationAssertion(rdfs:label "white matter of metencephalon") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (white matter of pons) AnnotationAssertion( "FMA:83940") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0019292") AnnotationAssertion(rdfs:label "white matter of pons") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (white matter of pontine tegmentum) AnnotationAssertion( "UBERON:0025819") AnnotationAssertion( "BIRNLEX:1069") AnnotationAssertion( "FMA:83942") AnnotationAssertion( "HBA:265505486") AnnotationAssertion(Annotation( "HBA:PoWM") "pontine white matter tracts") AnnotationAssertion(Annotation( "BIRNLEX:1069") "predominantly white regional part of pontine tegmentum") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) "substantia alba tegmenti pontis") AnnotationAssertion(Annotation( "FMA:83942") "white matter of pontile tegmentum") AnnotationAssertion(Annotation( "FMA:83942") "white substance of pontile tegmentum") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0019293") AnnotationAssertion(rdfs:label "white matter of pontine tegmentum") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (commissure of telencephalon) AnnotationAssertion( "HBA:9220") AnnotationAssertion(Annotation( "HBA:TELCom") "telencephalic commissures") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0019294") AnnotationAssertion(rdfs:label "commissure of telencephalon") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (caudal intralaminar nuclear group) AnnotationAssertion( ) AnnotationAssertion( "DHBA:10448") AnnotationAssertion( "HBA:12921") AnnotationAssertion(Annotation( "HBA:ILc") "caudal group of intralaminar nuclei") AnnotationAssertion(Annotation( "DHBA:PILN") "posterior group of intralaminar nuclei") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "HBA:ILc") Annotation( ) "ILc") AnnotationAssertion(Annotation( "NeuroNames:1762") "posterior intralaminar nucleus of the thalamus") AnnotationAssertion(Annotation( "NeuroNames:1762") "posterior intralaminar thalamic nucleus") AnnotationAssertion( "UBERON:0019295") AnnotationAssertion(rdfs:label "caudal intralaminar nuclear group") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (occipital sulcus) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "HBA:9386") AnnotationAssertion( "NCIT:C33196") AnnotationAssertion( "occipital lobe sulcus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0019303") AnnotationAssertion(rdfs:label "occipital sulcus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (sensory organ epithelium) AnnotationAssertion( "EMAPA:35952") AnnotationAssertion( "MA:0003174") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0019304") AnnotationAssertion(rdfs:label "sensory organ epithelium") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (nose epithelium) AnnotationAssertion( "EMAPA:35958") AnnotationAssertion( "MA:0003171") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0019306") AnnotationAssertion(rdfs:label "nose epithelium") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (epithelium of external nose) AnnotationAssertion(Annotation( ) "Epithelial layer that is part of the external part of the nose.") AnnotationAssertion( "FMA:63143") AnnotationAssertion(Annotation( "FMA:63143") "epithelium of skin of external nose") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0019307") AnnotationAssertion(rdfs:label "epithelium of external nose") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (septohypothalamic nucleus) AnnotationAssertion(Annotation( ) "A group of cells located between the lateral septal nucleus and the anterior commissure in the mouse ( Paxinos-2001 ). Some authors regard it as part of the lateral septal nucleus ( Swanson-1998 ).") AnnotationAssertion( ) AnnotationAssertion( "DHBA:13033") AnnotationAssertion( "DMBA:15761") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "DHBA:SHy") Annotation( ) "SHy") AnnotationAssertion( "UBERON:0019308") AnnotationAssertion(rdfs:label "septohypothalamic nucleus") SubClassOf( ) SubClassOf(Annotation( "DHBA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (glossopharyngeal nerve root) AnnotationAssertion( "BIRNLEX:1533") AnnotationAssertion( "DHBA:12887") AnnotationAssertion( "DMBA:17747") AnnotationAssertion(Annotation( "BIRNLEX:1533") "glossopharyngeal nerve root") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0019310") AnnotationAssertion(rdfs:label "glossopharyngeal nerve root") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (root of olfactory nerve) AnnotationAssertion(Annotation( ) "The initial segment of an olfactory nerve, leaving the central nervous system.") AnnotationAssertion( "BIRNLEX:1632") AnnotationAssertion(Annotation( "BIRNLEX:1632") "olfactory nerve root") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0019311") AnnotationAssertion(rdfs:label "root of olfactory nerve") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (ventrolateral nucleus of solitary tract) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:2664") AnnotationAssertion( "DHBA:12569") AnnotationAssertion( "FMA:229583") AnnotationAssertion( "HBA:9664") AnnotationAssertion(Annotation( "BIRNLEX:2664") Annotation( ) "ventrolateral subnucleus of solitary tract") AnnotationAssertion(Annotation( "HBA:SolVL") "ventrolateral subnucleus of solitary tract, left") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BIRNLEX:2664") "nucleus of the solitary tract, ventrolateral part") AnnotationAssertion( "UBERON:0019312") AnnotationAssertion(rdfs:label "ventrolateral nucleus of solitary tract") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (epifascicular nucleus) AnnotationAssertion( ) AnnotationAssertion( "DHBA:12649") AnnotationAssertion( "HBA:9551") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0019314") AnnotationAssertion(rdfs:label "epifascicular nucleus") SubClassOf( ) SubClassOf(Annotation( "HBA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (meibum) AnnotationAssertion(Annotation( ) "An oily substance that prevents evaporation of the eye's tear film.") AnnotationAssertion( "provides barrier to prevent dessication of cornea[ISBN:0123813611]") AnnotationAssertion( "part of surface lipid layer of tear film") AnnotationAssertion( "uberon") AnnotationAssertion( "tarsal gland secretion") AnnotationAssertion( "UBERON:0019315") AnnotationAssertion(rdfs:label "meibum") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (exocrine gland of integumental system) AnnotationAssertion(Annotation( ) Annotation( "GOC:dos") "An exocrine gland that is part of a integumental system.") AnnotationAssertion(Annotation( ) "integumental exocrine gland") AnnotationAssertion(Annotation( ) "integumental system exocrine gland") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0019319") AnnotationAssertion(rdfs:label "exocrine gland of integumental system") SubClassOf( ) SubClassOf( ) # Class: (precordial region) AnnotationAssertion(Annotation( ) "A subdivision of the trunk that is comprised of the epigastrium and the anterior lower thorax.") AnnotationAssertion( ) AnnotationAssertion( "FMA:12824") AnnotationAssertion(Annotation( "FMA:12824") "precordial region") AnnotationAssertion(Annotation( "FMA:12824") "precordium") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0019320") AnnotationAssertion(rdfs:label "precordial region") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lobe of lacrimal gland) AnnotationAssertion(Annotation( ) "An anatomical lobe that is part of a lacrimal gland.") AnnotationAssertion( "In humans the lacrimal gland consists of two contiguous lobes [ISBN:0123813611]") AnnotationAssertion(Annotation( "FMA"^^xsd:string) "the placement of FMA zone of lacrimal gland here may be incorrect") AnnotationAssertion( "FMA:59381") AnnotationAssertion(Annotation( "FMA:59381") "lacrimal gland zone") AnnotationAssertion(Annotation( "FMA:59381") "zone of lacrimal gland") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0019326") AnnotationAssertion(rdfs:label "lobe of lacrimal gland") SubClassOf( ) # Class: (orbital lobe of lacrimal gland) AnnotationAssertion(Annotation( "ISBN:0123813611"^^xsd:string) "Larger of the two lacrimal gland lobes located superficially.") AnnotationAssertion( ) AnnotationAssertion( "FMA:59383") AnnotationAssertion(Annotation( "FMA:59383") "orbital part of lacrimal gland") AnnotationAssertion(Annotation( "FMA:59383") "pars orbitalis (glandula lacrimalis)") AnnotationAssertion(Annotation( "FMA:59383") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "pars orbitalis glandulae lacrimalis") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0019327") AnnotationAssertion(rdfs:label "orbital lobe of lacrimal gland") SubClassOf(Annotation( "ISBN:0123813611"^^xsd:string) ) # Class: (palpebral lobe of lacrimal gland) AnnotationAssertion(Annotation( "ISBN:0123813611"^^xsd:string) "Smaller of the two lacrimal gland lobes located at the eyelid.") AnnotationAssertion( ) AnnotationAssertion( "FMA:59384") AnnotationAssertion(Annotation( "FMA:59384") "palpebral part of lacrimal gland") AnnotationAssertion(Annotation( "FMA:59384") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "pars palpebralis glandulae lacrimalis") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0019328") AnnotationAssertion(rdfs:label "palpebral lobe of lacrimal gland") SubClassOf(Annotation( "ISBN:0123813611"^^xsd:string) ) # Class: (accessory XI nerve nucleus) AnnotationAssertion(Annotation( ) "The spinal accessory nucleus lies within the cervical spinal cord (C1-C5) in the ventral horn. The nucleus ambiguus is classically said to provide the 'cranial component' of the accessory nerve. However, the very existence of this cranial component has been recently questioned and seen as contributing exclusively to the vagus nerve. The terminology continues to be used in describing both human anatomy, and that of other animals.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37067") AnnotationAssertion( "FMA:83965") AnnotationAssertion( "MA:0001033") AnnotationAssertion(Annotation( "FMA:83965") "accessory neural nucleus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:2003") "accessory nucleus of anterior column of spinal cord") AnnotationAssertion(Annotation( "NeuroNames:2003") Annotation( ) "nucleus accessorius columnae anterioris medullae spinalis") AnnotationAssertion(Annotation( "NeuroNames:2003") Annotation( ) "nucleus nervi accessorii") AnnotationAssertion(Annotation( "NeuroNames:2003") "nucleus of accessory nerve") AnnotationAssertion(Annotation( "NeuroNames:2003") "nucleus of the accessory nerve") AnnotationAssertion(Annotation( "NeuroNames:2003") "nucleus of the spinal accessory nerve") AnnotationAssertion(Annotation( ) "spinal accessory nucleus") AnnotationAssertion( "UBERON:0020358") AnnotationAssertion(rdfs:comment "See also: Wikipedia:Spinal_accessory_nucleus") AnnotationAssertion(rdfs:label "accessory XI nerve nucleus") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ) # Class: (auricular blood vessel) AnnotationAssertion(Annotation( ) "A blood vessel that supplies or drains an ear.") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37386") AnnotationAssertion( "MA:0001226") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0020550") AnnotationAssertion(rdfs:label "auricular blood vessel") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (posterior amygdaloid nucleus) AnnotationAssertion( "EMAPA:35694") AnnotationAssertion( "MA:0002928") AnnotationAssertion( "MBA:780") AnnotationAssertion(Annotation( "ABA:PA") "posterior amygdalar nucleus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0022229") AnnotationAssertion(rdfs:label "posterior amygdaloid nucleus") SubClassOf( ) SubClassOf(Annotation( "MA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (retrohippocampal region) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:35745") AnnotationAssertion( "MA:0000920") AnnotationAssertion( "MBA:822") AnnotationAssertion(Annotation( "MA:0000920") "retrohippocampal cortex") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0022230") AnnotationAssertion(rdfs:label "retrohippocampal region") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "ABA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (secondary visual cortex) AnnotationAssertion( "EMAPA:35758") AnnotationAssertion( "MA:0000915") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0022232") AnnotationAssertion(rdfs:label "secondary visual cortex") SubClassOf( ) SubClassOf(Annotation( "cjm"^^xsd:string) ) SubClassOf(Annotation( "cjm"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) # Class: (medial longitudinal stria) AnnotationAssertion( ) AnnotationAssertion( "DHBA:12066") AnnotationAssertion( "FMA:67956") AnnotationAssertion( "HBA:265505202") AnnotationAssertion(Annotation( "FMA:67956") "medial longitudinal stria of lancisi") AnnotationAssertion(Annotation( "FMA:67956") "medial stripe of lancisi") AnnotationAssertion(Annotation( "FMA:67956") "medial white stria of lancisi") AnnotationAssertion(Annotation( "FMA:67956") "stria of lancisi") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:175") "medial longitudinal stria") AnnotationAssertion(Annotation( "NeuroNames:175") "medial longitudinal stria of Lancisi") AnnotationAssertion(Annotation( "NeuroNames:175") "medial stripe of Lancisi") AnnotationAssertion(Annotation( "NeuroNames:175") "medial white stria of Lancisi") AnnotationAssertion(Annotation( "NeuroNames:175") Annotation( ) "stria Lancisii") AnnotationAssertion(Annotation( "NeuroNames:175") Annotation( ) "stria longitudinalis interna") AnnotationAssertion(Annotation( "NeuroNames:175") Annotation( ) "stria longitudinalis medialis") AnnotationAssertion(Annotation( "NeuroNames:175") Annotation( ) "taenia libera Lancisi") AnnotationAssertion(Annotation( "NeuroNames:175") Annotation( ) "taenia libra") AnnotationAssertion( "UBERON:0022234") AnnotationAssertion(rdfs:label "medial longitudinal stria") SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "HBA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (peduncle of diencephalon) AnnotationAssertion( "FMA:62444") AnnotationAssertion(Annotation( "FMA:62444") "diencephalon peduncle") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0022235") AnnotationAssertion(rdfs:label "peduncle of diencephalon") SubClassOf( ) SubClassOf( ) # Class: (peduncle of thalamus) AnnotationAssertion( ) AnnotationAssertion( "MBA:365") AnnotationAssertion( "thalamic peduncle") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0022236") AnnotationAssertion(rdfs:label "peduncle of thalamus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (anterior thalamic peduncle) AnnotationAssertion( ) AnnotationAssertion( "DHBA:266441633") AnnotationAssertion( "FMA:62074") AnnotationAssertion( "HBA:265505274") AnnotationAssertion(Annotation( "FMA:62074") "anterior peduncle") AnnotationAssertion(Annotation( "FMA:62074") "frontal peduncle") AnnotationAssertion(Annotation( "FMA:62074") "frontal thalamic peduncle") AnnotationAssertion(Annotation( "FMA:62074") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "pedunculus rostralis thalami") AnnotationAssertion(Annotation( "FMA:62074") "rostral peduncle of thalamus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0022237") AnnotationAssertion(rdfs:label "anterior thalamic peduncle") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "HBA"^^xsd:string) ObjectSomeValuesFrom( )) DisjointClasses(Annotation( "lexical"^^xsd:string) ) # Class: (superior thalamic peduncle) AnnotationAssertion( ) AnnotationAssertion( "FMA:62075") AnnotationAssertion(Annotation( "FMA:62075") "centroparietal peduncle") AnnotationAssertion(Annotation( "FMA:62075") "centroparietal thalamic peduncle") AnnotationAssertion(Annotation( "FMA:62075") "middle thalamic peduncle") AnnotationAssertion(Annotation( "FMA:62075") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "pedunculus thalami superior") AnnotationAssertion(Annotation( "FMA:62075") "superior peduncle") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0022241") AnnotationAssertion(rdfs:label "superior thalamic peduncle") SubClassOf( ) # Class: (inferior thalamic peduncle) AnnotationAssertion( ) AnnotationAssertion( "DHBA:12059") AnnotationAssertion( "FMA:62076") AnnotationAssertion( "HBA:265505110") AnnotationAssertion(Annotation( "FMA:62076") "inferior peduncle") AnnotationAssertion(Annotation( "FMA:62076") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "pedunculus inferior thalami") AnnotationAssertion(Annotation( "FMA:62076") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "pedunculus thalami caudalis") AnnotationAssertion(Annotation( "FMA:62076") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "pedunculus thalami inferior") AnnotationAssertion(Annotation( "FMA:62076") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "pedunculus thalamicus inferior") AnnotationAssertion(Annotation( "FMA:62076") "temporal peduncle") AnnotationAssertion(Annotation( "FMA:62076") "temporal thalamic peduncle") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0022242") AnnotationAssertion(rdfs:label "inferior thalamic peduncle") SubClassOf( ) # Class: (posterior thalamic peduncle) AnnotationAssertion( ) AnnotationAssertion( "FMA:62077") AnnotationAssertion(Annotation( "FMA:62077") "occipital peduncle") AnnotationAssertion(Annotation( "FMA:62077") "occipital thalamic peduncle") AnnotationAssertion(Annotation( "FMA:62077") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "pedunculus ventrocaudalis thalami") AnnotationAssertion(Annotation( "FMA:62077") "posterior peduncle") AnnotationAssertion(Annotation( "FMA:62077") "ventrocaudal thalamic peduncle") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0022243") AnnotationAssertion(rdfs:label "posterior thalamic peduncle") SubClassOf( ) # Class: (anterior orbital gyrus) AnnotationAssertion( ) AnnotationAssertion( "FMA:256196") AnnotationAssertion( "HBA:4053") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "HBA:AOrG") Annotation( ) "AOrG") AnnotationAssertion( "UBERON:0022244") AnnotationAssertion(rdfs:label "anterior orbital gyrus") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (superior longitudinal fasciculus) AnnotationAssertion(Annotation( ) "The superior longitudinal fasciculus (also called the superior longitudinal fascicle or SLF) is a pair of long bi-directional bundles of neurons connecting the front and the back of the cerebrum. Each association fiber bundle is lateral to the centrum ovale of a cerebral hemisphere and connects the frontal, occipital, parietal, and temporal lobes. The neurons pass from the frontal lobe through the operculum to the posterior end of the lateral sulcus where numerous neurons radiate into the occipital lobe and other neurons turn downward and forward around the putamen and radiate to anterior portions of the temporal lobe.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "DHBA:10592") AnnotationAssertion( "FMA:77631") AnnotationAssertion( "HBA:9281") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "superior longitudinal fascicle") AnnotationAssertion( "UBERON:0022246") AnnotationAssertion(rdfs:label "superior longitudinal fasciculus") SubClassOf( ) SubClassOf(Annotation( "HBA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (forebrain ipsilateral fiber tracts) AnnotationAssertion( "DHBA:10568") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "DHBA:FIFT") Annotation( ) "FIFT") AnnotationAssertion( "UBERON:0022247") AnnotationAssertion(rdfs:label "forebrain ipsilateral fiber tracts") SubClassOf( ) SubClassOf(Annotation( "DHBA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (cerebral nerve fasciculus) AnnotationAssertion( "FMA:260712") AnnotationAssertion(Annotation( "FMA:260712") "cerebral fascicle") AnnotationAssertion(Annotation( "FMA:260712") "cerebral fasciculus") AnnotationAssertion( "nerve fascicle of telencephalon") AnnotationAssertion( "telencephalic fascicle") AnnotationAssertion( "telencephalic nerve fascicle") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0022248") AnnotationAssertion(rdfs:label "cerebral nerve fasciculus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (subcallosal fasciculus) AnnotationAssertion(Annotation( "WP"^^xsd:string) ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "DHBA:12071") AnnotationAssertion( "FMA:77634") AnnotationAssertion( "FMA:77637") AnnotationAssertion( "HBA:265505338") AnnotationAssertion(Annotation( "FMA:77634") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "fasciculus occipitofrontalis superior") AnnotationAssertion(Annotation( "FMA:77637") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "fasciculus subcallosus") AnnotationAssertion(Annotation( "DHBA:12071") "superior occipitofrontal fasciculus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:2141") "subcallosal bundle") AnnotationAssertion(Annotation( "NeuroNames:2141") "superior fronto-occipital bundle") AnnotationAssertion(Annotation( "NeuroNames:2141") "superior fronto-occipital fasciculus") AnnotationAssertion(Annotation( "NeuroNames:2141") "superior occipito-frontal fascicle") AnnotationAssertion(Annotation( "NeuroNames:2141") "superior occipitofrontal fasciculus") AnnotationAssertion( "UBERON:0022250") AnnotationAssertion(rdfs:label "subcallosal fasciculus") SubClassOf( ) # Class: (precentral sulcus) AnnotationAssertion(Annotation( ) "The precentral sulcus lies parallel to, and in front of, the central sulcus. (A sulcus is one of the prominent grooves on the surface of the human brain. ) The precentral sulcus divides the inferior, middle, and superior frontal gyri from the precentral gyrus. In the majority of brains, the precentral sulcus is divided into two parts: the inferior precentral sulcus and the superior precentral sulcus. However, the precentral sulcus may also be divided into three parts or form one continuous sulcus.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "DHBA:10628") AnnotationAssertion( "FMA:83800") AnnotationAssertion( "HBA:9355") AnnotationAssertion( "NCIT:C33394") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0022252") AnnotationAssertion(rdfs:label "precentral sulcus") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ) SubClassOf(Annotation( "HBA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (ventral thalamic fasciculus) AnnotationAssertion(Annotation( ) "The thalamic fasciculus is a component of the subthalamus. It is sometimes considered synonymous with 'field H1 of Forel'. Nerve fibres forming a composite bundle containing cerebellothalamic (crossed) and pallidothalamic (uncrossed) fibres that is insinuated between the thalamus and zona incerta. The thalamic fasciculus consists of the joint fibers of the ansa lenticularis and the lenticular fasciculus, coming from different portions of the medial globus pallidus, before they jointly enter the ventral lateral nucleus of the thalamus.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "DHBA:10593") AnnotationAssertion( "FMA:62065") AnnotationAssertion( "HBA:265505374") AnnotationAssertion(Annotation( "FMA:62065") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "area subthalamica tegmentalis, pars dorsomedialis") AnnotationAssertion(Annotation( "FMA:62065") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "area tegmentalis H1") AnnotationAssertion(Annotation( "FMA:62065") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "area tegmentalis, pars dorsalis") AnnotationAssertion(Annotation( "FMA:62065") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "area tegmentalis, pars dorsalis (Forel)") AnnotationAssertion(Annotation( "FMA:62065") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "campus foreli (pars dorsalis)") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) "fasciculus thalamicus") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) "fasciculus thalamicus [h1]") AnnotationAssertion(Annotation( "FMA:62065") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "fasciculus thalamicus hypothalami") AnnotationAssertion(Annotation( "FMA:62065") "field H1") AnnotationAssertion(Annotation( "FMA:62065") "forel's field h1") AnnotationAssertion(Annotation( "FMA:62065") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "forelli campus I") AnnotationAssertion(Annotation( "FMA:62065") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "h1 bundle of Forel") AnnotationAssertion(Annotation( "FMA:62065") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "h1 field of Forel") AnnotationAssertion(Annotation( "FMA:62065") "tegmental area h1") AnnotationAssertion(Annotation( "FMA:62065") "thalamic fasciculus") AnnotationAssertion(Annotation( "FMA:62065") "thalamic fasciculus [h1]") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0022254") AnnotationAssertion(rdfs:label "ventral thalamic fasciculus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "DHBA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (subthalamic fasciculus) AnnotationAssertion(Annotation( ) "The subthalamic fasciculus is a tract which connects the subthalamic nucleus and the globus pallidus. It is a bidirectional connection between the GP and the subthalamic nucleus, including (1) fibers running from the GPe to the subthalamic nucleus, and (2) fibers running from the STN back to the GP.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "DHBA:12089") AnnotationAssertion( "FMA:77525") AnnotationAssertion( "HBA:265505350") AnnotationAssertion( "MBA:317") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:2280") Annotation( ) "fasciculus subthalamicus") AnnotationAssertion(Annotation( "NeuroNames:2280") "subthalamic fascicle") AnnotationAssertion(Annotation( "NeuroNames:2280") "subthalamic fasciculus") AnnotationAssertion( "UBERON:0022256") AnnotationAssertion(rdfs:label "subthalamic fasciculus") SubClassOf( ) SubClassOf(Annotation( "DHBA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (endolemniscal nucleus) AnnotationAssertion( "DHBA:12648") AnnotationAssertion( "FMA:77099") AnnotationAssertion( "HBA:9548") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "HBA:EL") Annotation( ) "EL") AnnotationAssertion( "UBERON:0022258") AnnotationAssertion(rdfs:label "endolemniscal nucleus") SubClassOf( ) SubClassOf(Annotation( "HBA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (white matter radiation) AnnotationAssertion( "FMA:83859") AnnotationAssertion(Annotation( "FMA:83859") "neuraxis radiation") AnnotationAssertion(Annotation( "FMA:83859") "radiation of neuraxis") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0022259") AnnotationAssertion(rdfs:label "white matter radiation") SubClassOf( ) # Class: (radiation of cerebral hemisphere) AnnotationAssertion( "FMA:61940") AnnotationAssertion(Annotation( "FMA:61940") "cerebral hemisphere radiation") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0022260") AnnotationAssertion(rdfs:label "radiation of cerebral hemisphere") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (auditory radiation) AnnotationAssertion(Annotation( ) "The acoustic radiations or auditory radiations are structures found in the brain, in the ventral cochlear pathway, a part of the auditory system. Lesions to the auditory radiations could be a cause of cortical deafness.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "DHBA:266441583") AnnotationAssertion( "FMA:62413") AnnotationAssertion( "HBA:265504974") AnnotationAssertion(Annotation( "FMA:62413") "acoustic radiation") AnnotationAssertion(Annotation( "FMA:62413") "geniculotemporal radiation") AnnotationAssertion(Annotation( "FMA:62413") "geniculotemporal tract") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) Annotation( ) "radiatio acustica") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "auditory radiation") AnnotationAssertion(Annotation( ) "auditory radiations") AnnotationAssertion( "UBERON:0022262") AnnotationAssertion(rdfs:label "auditory radiation") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf(Annotation( "DHBA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (optic radiation) AnnotationAssertion(Annotation( ) "The optic radiation (also known as the geniculo-calcarine tract or as the geniculostriate pathway) is a collection of axons from relay neurons in the lateral geniculate nucleus of the thalamus carrying visual information to the visual cortex (also called striate cortex) along the calcarine fissure. There is one such tract on each side of the brain.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "DHBA:266441621") AnnotationAssertion( "FMA:61941") AnnotationAssertion( "HBA:9311") AnnotationAssertion(Annotation( "FMA:61941") "Gratiolet's radiation") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "archambault%27s loop") AnnotationAssertion(Annotation( ) "genicula-celcarine tract") AnnotationAssertion(Annotation( ) "geniculo-calcarine tract") AnnotationAssertion(Annotation( ) "geniculocalcarine tract") AnnotationAssertion(Annotation( ) "geniculostriate pathway") AnnotationAssertion(Annotation( ) "meyer's loop") AnnotationAssertion(Annotation( ) "optic radiations") AnnotationAssertion(Annotation( ) "radiatio optica") AnnotationAssertion(Annotation( ) "railroad nystagmus") AnnotationAssertion( "UBERON:0022264") AnnotationAssertion(rdfs:label "optic radiation") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf(Annotation( "DHBA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (planum temporale) AnnotationAssertion(Annotation( ) Annotation( ) "The planum temporale is the cortical area just posterior to the auditory cortex within the Sylvian fissure. It is a triangular region which forms the heart of Wernicke's area, one of the most important functional areas for language. The planum temporale shows a significant asymmetry. In 65% of all individuals the left planum temporale appears to be more developed, while the right planum temporale is more developed in only 10%. In some peoplebs brains, the planum temporale is more than five times larger on the left than on the right, making it the most asymmetrical structure in the brain. This greater size of the left planum temporale compared with the right is already present in the foetus, where it can be observed starting from the 31st week of gestation. This observation strengthens the hypothesis of a genetic predisposition for brain asymmetry.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "DHBA:12145") AnnotationAssertion( "HBA:4171") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "HBA:PLT") Annotation( ) "PLT") AnnotationAssertion( "UBERON:0022268") AnnotationAssertion(rdfs:label "planum temporale") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "HBA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (corticopontine fibers) AnnotationAssertion(Annotation( ) "Corticopontine fibers, commonly referred to as corticobulbar fibers, are projections from the cerebral cortex to the pontine nuclei. Depending upon the lobe of origin, they can be classified as frontopontine fibers, parietopontine fibers, temporopontine fibers and occipitopontine fibers. They are motor fibers that stretch from the precentral gyrus (motor strip) to the nuclei of cranial nerves V (trigenimal), VII (facial) and XII (hypoglossal). These fibers run alongside the corticospinal fibers.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "DHBA:266441721") AnnotationAssertion( "FMA:75190") AnnotationAssertion( "HBA:265505490") AnnotationAssertion(Annotation( "HBA:cpn") "cortico-pontine fibers") AnnotationAssertion(Annotation( "DHBA:cpn") "cortico-pontine fibers, pontine part") AnnotationAssertion(Annotation( "FMA:75190") "corticopontine fibers") AnnotationAssertion( "corticopontine fibers of pons") AnnotationAssertion(Annotation( "FMA:75190") "corticopontine fibers set") AnnotationAssertion(Annotation( "FMA:75190") "corticopontine fibres") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) "fibrae corticopontinae") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) Annotation( ) "tractus corticopontinus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "corticopontine") AnnotationAssertion(Annotation( ) "corticopontine fibres") AnnotationAssertion( "UBERON:0022271") AnnotationAssertion(rdfs:label "corticopontine fibers") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "HBA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (corticobulbar tract) AnnotationAssertion(Annotation( ) "The corticobulbar (or corticonuclear) tract is a white matter pathway connecting the cerebral cortex to the brainstem. The term 'bulbar' refers to the brainstem, as 'bulb' was a historical term meaning the area currently called the brainstem. The 'bulb' is an archaic term for the medulla oblongata. In clinical usage, it includes the pons as well.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "DHBA:12774") AnnotationAssertion( "FMA:275544") AnnotationAssertion( "HBA:265505058") AnnotationAssertion( "MBA:994") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "bulbar") AnnotationAssertion(Annotation( "DHBA:cbu-h") Annotation( ) "cbu-h") AnnotationAssertion(Annotation( ) "cortico-bulbar tract") AnnotationAssertion(Annotation( ) "corticobulbar") AnnotationAssertion(Annotation( ) "corticobulbar axons") AnnotationAssertion(Annotation( ) "corticobulbar fiber") AnnotationAssertion(Annotation( ) "corticobulbar fibre") AnnotationAssertion(Annotation( ) "corticobulbar pathway") AnnotationAssertion(Annotation( ) "corticonuclear tract") AnnotationAssertion( "UBERON:0022272") AnnotationAssertion(rdfs:label "corticobulbar tract") SubClassOf( ) SubClassOf(Annotation( "HBA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lacrimal lake) AnnotationAssertion(Annotation( "MGI:anna"^^xsd:string) "A small cistern-like area of the conjunctiva at the medial angle of the eye, in which the tears collect after bathing the front surface of the eyeball and the conjunctival sac.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:59402") AnnotationAssertion(Annotation( "MGI:anna"^^xsd:string) "lacrymal lake") AnnotationAssertion(Annotation( ) "lacus lacrimalis") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0022273") AnnotationAssertion(rdfs:label "lacrimal lake") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lacrimal papilla) AnnotationAssertion(Annotation( ) "A small conical elevation at the basal angle of the lacrimal lake.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:59407") AnnotationAssertion(Annotation( ) Annotation( ) "papilla lacrimalis") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0022274") AnnotationAssertion(rdfs:label "lacrimal papilla") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (colic flexure) AnnotationAssertion(Annotation( ) "A sharp bend between consecutive segments of the colon.") AnnotationAssertion( ) AnnotationAssertion( "FMA:14555") AnnotationAssertion(Annotation( "FMA:14555") "flexura coli") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0022275") AnnotationAssertion(rdfs:label "colic flexure") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (splenic flexure of colon) AnnotationAssertion(Annotation( ) "The splenic (or left colic) flexure is a sharp bend between the transverse and the descending colon in the left upper quadrant of humans. The left colic flexure is near the spleen, and hence called the splenic flexure. There are two colic flexures in the transverse colon — the other being the hepatic flexure in the right upper quadrant.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:14551") AnnotationAssertion( "NCIT:C12267") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) Annotation( ) "flexura coli splenica") AnnotationAssertion(Annotation( "FMA:14551") "left colic flexure") AnnotationAssertion(Annotation( "FMA:14551") "splenic flexure") AnnotationAssertion(Annotation( "FMA:14551") "splenic flexure of colon") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "left colic flexure") AnnotationAssertion( "UBERON:0022276") AnnotationAssertion(rdfs:label "splenic flexure of colon") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) SubClassOf(Annotation( "Wikipedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (hepatic flexure of colon) AnnotationAssertion(Annotation( ) "Hepatic (or the right colic) flexure is the sharp bend between the ascending and the transverse colon. The right colic flexure is adjacent to the liver, and is therefore also known as the hepatic flexure. Thus, the left colic flexure is also known as the splenic flexure (as it is close to the spleen). The hepatic flexure lies in the right upper quadrant of the abdomen in humans.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:14550") AnnotationAssertion( "NCIT:C12266") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) Annotation( ) "flexura coli heaptica") AnnotationAssertion(Annotation( "FMA:14550") "hepatic flexure") AnnotationAssertion(Annotation( "FMA:14550") "hepatic flexure of colon") AnnotationAssertion(Annotation( "FMA:14550") "right colic flexure") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "right colic flexure") AnnotationAssertion( "UBERON:0022277") AnnotationAssertion(rdfs:label "hepatic flexure of colon") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) SubClassOf(Annotation( "Wikipedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (nucleus of pudendal nerve) AnnotationAssertion(Annotation( ) Annotation( ) "A nucleus in the ventral part of the anterior horn of the sacral region of the spinal cord that is the origin of the pudendal nerve.") AnnotationAssertion( "involved in the maintenance of micturition and defecatory continence, as well as muscular contraction during orgasm.") AnnotationAssertion( "The neurons in Onuf's nucleus are motoneurons, and like most motoneurons they are characterized by their mulipolarity and large Nissl bodies") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:257031") AnnotationAssertion( "FMA:77024") AnnotationAssertion(Annotation( "FMA:77024") "Onuf's nucleus") AnnotationAssertion(Annotation( "FMA:257031") "nucleus of Onuf") AnnotationAssertion(Annotation( "FMA:77024") "pudendal neural nucleus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0022278") AnnotationAssertion(rdfs:label "nucleus of pudendal nerve") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (strand of hair on external ear) AnnotationAssertion( "FMA:53671") AnnotationAssertion(Annotation( "FMA:53671") "hair of external ear") AnnotationAssertion(Annotation( "FMA:53671") "hair of tragus") AnnotationAssertion(Annotation( "FMA:53671") "tragus hair") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0022279") AnnotationAssertion(rdfs:label "strand of hair on external ear") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (epithelium of crypt of Lieberkuhn of small intestine) AnnotationAssertion( "FMA:63243") AnnotationAssertion(Annotation( "FMA:63243") "epithelium of small intestinal crypt of Lieberkuhn") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:63243") "wall of small intestinal crypt of Lieberkuhn") AnnotationAssertion( "UBERON:0022280") AnnotationAssertion(rdfs:label "epithelium of crypt of Lieberkuhn of small intestine") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (epithelium of crypt of Lieberkuhn of large intestine) AnnotationAssertion( "FMA:63628") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0022281") AnnotationAssertion(rdfs:label "epithelium of crypt of Lieberkuhn of large intestine") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pineal recess of third ventricle) AnnotationAssertion(Annotation( "ISBN:068340007X") "The diverticulum of the thin roof of the dorsocaudal third ventricle that projects into the stalk of the pineal gland.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "DHBA:266441661") AnnotationAssertion( "EMAPA:18542") AnnotationAssertion( "FMA:78458") AnnotationAssertion(Annotation( "FMA:78458") "pineal recess") AnnotationAssertion(Annotation( "DHBA:266441661") "pineal recess of 3V") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) Annotation( ) "recessus pinealis") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:456") Annotation( ) "recessus epiphysis") AnnotationAssertion( "UBERON:0022283") AnnotationAssertion(rdfs:label "pineal recess of third ventricle") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lacrimal gland bud) AnnotationAssertion(Annotation( "MGI:anna"^^xsd:string) "The single bud-like invagination of the conjunctival fornix epithelium at the temporal aspect of the eye that signals lacrimal gland formation (Int Rev Cytol. 1996;168:1-80. Cell biology of the harderian gland).") AnnotationAssertion( "in mouse, the primary bud arises around E13.5 and extends caudally into the surrounding neural-crest derived periocular mesenchyme; between E15.5 and E16.5 the bud undergoes branching morphogenesis, forming both a major extra-orbital lobe and a minor intraorbital lobe") AnnotationAssertion( "EMAPA:35464") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0022284") AnnotationAssertion(rdfs:label "lacrimal gland bud") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (strand of tylotrich hair) AnnotationAssertion(Annotation( "CL:1001436") Annotation( "MP:0000977") "A single large hair, surrounded by neurovascular tissue at the level of the sebaceous gland, with a hair follicle innervated by a hair-tylotrich neuron (CL:1001436), a rapidly acting mechanoreceptor.") AnnotationAssertion( "CL:1001436") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0022285") AnnotationAssertion(rdfs:label "strand of tylotrich hair") SubClassOf( ) # Class: (tear film) AnnotationAssertion(Annotation( ) "An aqueous substance that covers the anterior surface of the eyeball, keeping the cornea wet.") AnnotationAssertion(Annotation( "MGI:anna") "the thin acellular fluid layer that adheres to the most superficial layer of the corneal epithelium and lubricates and protects the ocular surface; the film is generally composed of three layers: (i) an inner mucous layer, secreted largely by the conjunctival goblet cells with contributions from the lacrimal glands, which coats the cornea, provides a hydrophobic layer, and allows for even distribution of the tear film; (ii) a middle aqueous layer, secreted by the lacrimal glands, which keeps the corneal surface moist, and provides a mechanism for oxygenation and nutrient exchange with the avascular anterior corneal tissue; and (iii) an outer lipid layer, secreted principally by the Meibomian (tarsal) glands although lipid tear elements also are contributed by the Harderian glands; tear film lipids form a monolayer on the tear surface, and function by enhancing the surface tension which supports the integrity of the tear film against collapse due to gravity and also slows down the loss of the tear film by evaporation; in addition , the lipid layer provides a glassy, smooth interface between the air and the transparent cornea") AnnotationAssertion( "maintenance of the avascular transparent corneal epithelium") AnnotationAssertion( "The tear film is structurally complex with three distinct layers: a surface lipid layer, a middle aqueous layer, and an inner mucus layer[http://physiologyonline.physiology.org/content/13/2/97]") AnnotationAssertion(Annotation( "MGI:anna"^^xsd:string) "precorneal film") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0022287") AnnotationAssertion(rdfs:label "tear film") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "primarily aqueous layer") ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (surface of eyeball) AnnotationAssertion( "FMA:58315") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:58315") "surface of region of wall of eyeball") AnnotationAssertion( "UBERON:0022288") AnnotationAssertion(rdfs:label "surface of eyeball") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (splenic arteriole) AnnotationAssertion( ) AnnotationAssertion( "NCIT:C33596") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0022292") AnnotationAssertion(rdfs:label "splenic arteriole") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (reproductive gland secretion) AnnotationAssertion(Annotation( "UBERON:cjm"^^xsd:string) "A portion of organism substance that is secreted by a reproductive gland.") AnnotationAssertion( "uberon") AnnotationAssertion( "genital fluid") AnnotationAssertion( "genital secretion") AnnotationAssertion( "reproductive system fluid") AnnotationAssertion( "reproductive system fluid/secretion") AnnotationAssertion( "reproductive system secretion") AnnotationAssertion( "UBERON:0022293") AnnotationAssertion(rdfs:label "reproductive gland secretion") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (morphological boundary) AnnotationAssertion(Annotation( "CARO:0001007") "A two dimensional anatomical structure that corresponds to some structural discontinuity.") AnnotationAssertion( "CARO:0001007") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0022294") AnnotationAssertion(rdfs:label "morphological boundary") SubClassOf(Annotation( "CARO"^^xsd:string) ) # Class: (integumental surface) AnnotationAssertion(Annotation( "CARO:DOS") "The outer surface of an organism or its integumental system.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0022295") AnnotationAssertion(rdfs:label "integumental surface") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (inferior palpebral branch of infra-orbital nerve) AnnotationAssertion(Annotation( ) "A nerve that innervates a lower eyelid and is a branch of the infra-orbital branch of the maxillary nerve.") AnnotationAssertion( ) AnnotationAssertion( "FMA:52983") AnnotationAssertion(Annotation( ) Annotation( ) "rami palpebrales inferiores nervi infraorbitalis") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0022296") AnnotationAssertion(rdfs:label "inferior palpebral branch of infra-orbital nerve") SubClassOf( ) SubClassOf( ) # Class: (palpebral branch of infra-orbital nerve) AnnotationAssertion(Annotation( ) "A nerve that innervates an eyelid and is a branch of the infra-orbital branch of the maxillary nerve.") AnnotationAssertion( ) AnnotationAssertion( "palpebral branch of maxillary nerve") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0022297") AnnotationAssertion(rdfs:label "palpebral branch of infra-orbital nerve") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lower eyelid nerve) AnnotationAssertion(Annotation( ) "A nerve that innervates a lower eyelid.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0022298") AnnotationAssertion(rdfs:label "lower eyelid nerve") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (upper eyelid nerve) AnnotationAssertion(Annotation( ) "A nerve that innervates an upper eyelid.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0022299") AnnotationAssertion(rdfs:label "upper eyelid nerve") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (nasociliary nerve) AnnotationAssertion(Annotation( ) "A branch of the ophthalmic nerve that serves to supply the mucous membrane of the nose, the tip of the nose, and the conjunctiva.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0001452") AnnotationAssertion( "FMA:52668") AnnotationAssertion( "NCIT:C33159") AnnotationAssertion(Annotation( "BTO:0001452") "nasal nerve") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "nasociliary") AnnotationAssertion(Annotation( "BTO:0001452") "nasociliary nerve") AnnotationAssertion(Annotation( "BTO:0001452") "nervus nasociliaris") AnnotationAssertion( "UBERON:0022300") AnnotationAssertion(rdfs:label "nasociliary nerve") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "BTO"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (long ciliary nerve) AnnotationAssertion(Annotation( ) Annotation( "UBERON:cjm"^^xsd:string) "A branch of the nasociliary nerve that innervates the ciliary muscles, the iris, and the cornea.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:52691") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "long ciliary nerve") AnnotationAssertion(Annotation( ) Annotation( ) "nervi ciliares longi") AnnotationAssertion( "UBERON:0022301") AnnotationAssertion(rdfs:label "long ciliary nerve") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (short ciliary nerve) AnnotationAssertion(Annotation( ) Annotation( "UBERON:cjm"^^xsd:string) "A branch of the ciliary ganglion that innervates the ciliary muscles, the iris, and the tunics of the eyeball.") AnnotationAssertion( "Contains preganglionic parasympathetic axons.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:7041") AnnotationAssertion(Annotation( "FMA:7041") "lower branch of ciliary ganglion") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "nervi ciliares breves") AnnotationAssertion(Annotation( ) "nervi ciliares brevis") AnnotationAssertion(Annotation( ) "short ciliary nerve") AnnotationAssertion( "UBERON:0022302") AnnotationAssertion(rdfs:label "short ciliary nerve") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (nervous system cell part layer) AnnotationAssertion(Annotation( "NLX:149357") "Single layer of a laminar structure, identified by different density, arrangement or size of cells and processes arranged in flattened layers or lamina[CUMBO].") AnnotationAssertion( "this is currently used to group some cellular layers that may not strictly conform to the CARO definition of cell-part layer. Consider genericisizing and introducing subtypes for cellular layer, fibrous layer and cell soma layer") AnnotationAssertion(Annotation( "CUMBO:CUMBO") "lamina") AnnotationAssertion(Annotation( "CUMBO:CUMBO") "layer") AnnotationAssertion( "NLX:149357") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0022303") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "nervous system cell part layer") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (superior colliculus stratum zonale) AnnotationAssertion(Annotation( "NLX:144108") "Most superficial layer of the superior colliculus consisting primarily of thin fibers derived primarily from the occipital cortex (Brodal, Neurological Anatomy, 2nd 3d, 1981, pg. 544).") AnnotationAssertion( "NLX:144108") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NLX:144108") "stratum zonale") AnnotationAssertion(Annotation( "NLX:144108") "zonal layer of superior colliculus") AnnotationAssertion( "UBERON:0022314") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "superior colliculus stratum zonale") SubClassOf( ) # Class: (primary motor cortex layer 5) AnnotationAssertion( "Note that in some lamination schemes, more particularly so in primates, this layer is referred to as layer IV thus resulting in some confusion when compared to the present scheme where the lamina dissecans is referred to layer IV[DOI:10.1155/2008/381243]") AnnotationAssertion( "NLX:144263") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NLX:144263") "primary motor cortex lamina V") AnnotationAssertion(Annotation( "NLX:144263") "primary motor cortex layer V") AnnotationAssertion( "UBERON:0022315") AnnotationAssertion(rdfs:label "primary motor cortex layer 5") SubClassOf( ) SubClassOf(Annotation( "nlx") ObjectSomeValuesFrom( )) SubClassOf(Annotation( "nlx") ObjectSomeValuesFrom( )) # Class: (primary motor cortex layer 6) AnnotationAssertion( "NLX:144264") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NLX:144264") "primary motor cortex lamina 6") AnnotationAssertion(Annotation( "NLX:144264") "primary motor cortex lamina VI") AnnotationAssertion(Annotation( "NLX:144264") "primary motor cortex layer VI") AnnotationAssertion( "UBERON:0022316") AnnotationAssertion(rdfs:label "primary motor cortex layer 6") SubClassOf( ) SubClassOf(Annotation( "nlx") ObjectSomeValuesFrom( )) SubClassOf(Annotation( "nlx") ObjectSomeValuesFrom( )) # Class: (olfactory cortex layer 1) AnnotationAssertion(Annotation( "NLX:152609") "Surface layer of the olfactory cortex that contains dendrites, fiber systems and a small number of neurons. It has been divided into a superficial part and a deep part.") AnnotationAssertion( "NLX:152609") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NLX:152609") "layer 1 of olfactory cortex") AnnotationAssertion(Annotation( "NLX:152609") "olfactory cortex plexiform layer") AnnotationAssertion( "UBERON:0022317") AnnotationAssertion(rdfs:label "olfactory cortex layer 1") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "nlx") ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (olfactory cortex layer 2) AnnotationAssertion(Annotation( "NLX:152610") "Middle layer of olfactory cortex lying deep to layer 1 and superficial to layer 3, characterized by a compact layer of cell bodies. It can be divided into a superficial part and a deep part.") AnnotationAssertion( "NLX:152610") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NLX:152610") "layer 2 of olfactory cortex") AnnotationAssertion( "UBERON:0022318") AnnotationAssertion(rdfs:label "olfactory cortex layer 2") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "nlx") ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lateral geniculate nucleus parvocellular layer) AnnotationAssertion(Annotation( "NLX:152619") "Layer of the lateral geniculate nucleus characterized by small cells (adapted from Wikipedia: https://en.wikipedia.org/wiki/Lateral_geniculate_nucleus).") AnnotationAssertion( "NLX:152619") AnnotationAssertion(Annotation( "NLX:152619") "LGN P-cell layer") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NLX:152619") "parvocellular layer of lateral geniculate nucleus") AnnotationAssertion( "UBERON:0022319") AnnotationAssertion(rdfs:label "lateral geniculate nucleus parvocellular layer") SubClassOf( ) # Class: (dorsal cochlear nucleus pyramidal cell layer) AnnotationAssertion( "NLX:153848") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0022320") AnnotationAssertion(rdfs:label "dorsal cochlear nucleus pyramidal cell layer") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (entorhinal cortex layer 4) AnnotationAssertion(Annotation( "NLX:39987") "Layer of entorhinal cortex lying superficial to layer 5 and deep to layer 3, that is relatively acellular. (Paxinos, The rat nervous system, Academic Press, 1995, pg 473-474).") AnnotationAssertion(Annotation( "NIF"^^xsd:string) "the two NIFSTD classes appear to refer to the same structure[DOI:10.1155/2008/381243]") AnnotationAssertion( "NLX:39987") AnnotationAssertion( "NLXANAT:1005008") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NLX:39987") "entorhinal cortex layer IV") AnnotationAssertion(Annotation( ) "lamina dessicans") AnnotationAssertion(Annotation( ) Annotation( "NLX:39987") "lamina dessicans of entorhinal cortex") AnnotationAssertion(Annotation( "NLX:39987") "layer 4 of entorhinal cortex") AnnotationAssertion( "UBERON:0022323") AnnotationAssertion(rdfs:comment "This layer is better developed in the medial entorhinal cortex although species differences are apparent[DOI:10.1155/2008/381243]") AnnotationAssertion(rdfs:label "entorhinal cortex layer 4") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "nlx") ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (entorhinal cortex layer 5) AnnotationAssertion(Annotation( "NLX:58") "Layer of entorhinal cortex lying superficial to layer 6 and deep to layer 4 characterized by large pyramidal neurons that are darkly stained in Nissl preparations (Adapted from Paxinos, G. The rat central nervous system, 2nd ed, Academic Press, San Diego, 1995, pg. 474).") AnnotationAssertion( "NLX:58") AnnotationAssertion(Annotation( ) "entorhinal cortex layer V") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0022325") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "entorhinal cortex layer 5") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "nlx") ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (molecular layer of dorsal cochlear nucleus) AnnotationAssertion( "NLX:89") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "MoC") AnnotationAssertion(Annotation( "NLX:89") "dorsal cochlear nucleus molecular layer") AnnotationAssertion( "UBERON:0022326") AnnotationAssertion(rdfs:label "molecular layer of dorsal cochlear nucleus") SubClassOf( ) SubClassOf(Annotation( "nlx") ) SubClassOf(Annotation( "nlx") ObjectSomeValuesFrom( )) # Class: (entorhinal cortex layer 3) AnnotationAssertion(Annotation( "NLX:93650") "Layer of the entorhinal cortex lying superficial to layer 4and deep to layer 2. It is characterized by cells of various sizes and shapes with a predominance of pyramidal cells (Adapted from Paxinos, G. The rat central nervous system, 2nd ed, Academic Press, San Diego, 1995, pg. 474).") AnnotationAssertion( "UBERON:0032288") AnnotationAssertion( "NLX:93650") AnnotationAssertion( "NLXANAT:20090702") AnnotationAssertion(Annotation( "NLXANAT:20090702") "entorhinal cortex, pyramidal layer") AnnotationAssertion(Annotation( "NLXANAT:20090702") "pyramidal layer of entorhinal cortex") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NLX:93650") "entorhinal cortex layer III") AnnotationAssertion(Annotation( "NLX:93650") "layer 3 of entorhinal cortex") AnnotationAssertion(Annotation( ) "pyramidal layer of entorhinal cortex") AnnotationAssertion( "UBERON:0022327") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "entorhinal cortex layer 3") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "nlx") ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (entorhinal cortex layer 6) AnnotationAssertion(Annotation( "NLX:98") "Layer of entorhinal cortex lying superficial to the cerebral white matter and deep to layer 5 characterized by cells of various shapes and sizes (Adapted from Paxinos, G. The rat central nervous system, 2nd ed, Academic Press, San Diego, 1995, pg. 474).") AnnotationAssertion( "NLX:98") AnnotationAssertion(Annotation( ) Annotation( "NLX:98") "entorhinal cortex layer VI") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NLX:98") "layer 6 region of entorhinal cortex") AnnotationAssertion( "UBERON:0022329") AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "This layer is delineated by the white matter, multiple layers can be distinguished, more in particular in primates[DOI:10.1155/2008/381243]") AnnotationAssertion(rdfs:label "entorhinal cortex layer 6") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "nlx") ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (entorhinal cortex layer 1) AnnotationAssertion(Annotation( "NLXANAT:090820") "Layer of the entorhinal cortex that is most superficial, continuous with layer 1 of adjacent neocortex and the molecular layer of the subiculum, lying deep to the pial layer and superficial to layer 2. It is relatively acellular consisting mostly of fibers running transversely relative to the cortical surface (Adapted from Paxinos, G. The rat central nervous system, 2nd ed, Academic Press, San Diego, 1995, pg. 474).") AnnotationAssertion(Annotation( "NIF"^^xsd:string) "the two NIFSTD classes appear to refer to the same structure[DOI:10.1155/2008/381243]") AnnotationAssertion( "NLXANAT:090820") AnnotationAssertion( "NLXANAT:20090701") AnnotationAssertion(Annotation( ) Annotation( "NLXANAT:090820") Annotation( "NLXANAT:20090701") "molecular layer of entorhinal cortex") AnnotationAssertion(Annotation( ) "superficial plexiform layer of entorhinal cortex") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "EC layer 1") AnnotationAssertion(Annotation( "NLXANAT:090820") "entorhinal cortex layer I") AnnotationAssertion(Annotation( "NLXANAT:090820") "entorhinal cortex molecular layer") AnnotationAssertion(Annotation( "NLXANAT:090820") "layer I of entorhinal cortex") AnnotationAssertion( "UBERON:0022336") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "entorhinal cortex layer 1") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "nlx") ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (entorhinal cortex layer 2) AnnotationAssertion(Annotation( "NLXANAT:090821") "Layer of the entorhinal cortex lying superficial to layer 3 and deep to layer 1. It is characterized by medium-to large sized stellate cells that are grouped into prominent clusters, particularly in the rostral entorhinal cortex (Adapted from Paxinos, G. The rat central nervous system, 2nd ed, Academic Press, San Diego, 1995, pg. 474).") AnnotationAssertion( "NLXANAT:090821") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "EC layer 2") AnnotationAssertion(Annotation( "NLXANAT:090821") "entorhinal cortex layer II") AnnotationAssertion(Annotation( "NLXANAT:090821") "layer 2 of entorhinal cortex") AnnotationAssertion(Annotation( "NLXANAT:090821") "layer II of entorhinal cortex") AnnotationAssertion(Annotation( ) "outermost cell layer of entorhinal cortex") AnnotationAssertion( "UBERON:0022337") AnnotationAssertion(rdfs:label "entorhinal cortex layer 2") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "nlx") ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (piriform cortex layer 2a) AnnotationAssertion(Annotation( "NLXANAT:091007") "Superficial region of layer 2 of the piriform cortex characterized by a less dense packing of cells and a concentration of semilunar cell bodies.") AnnotationAssertion( "NLXANAT:091007") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NLXANAT:091007") "layer 2a of piriform cortex") AnnotationAssertion(Annotation( "NLXANAT:091007") "layer IIa of piriform cortex") AnnotationAssertion(Annotation( "NLXANAT:091007") "piriform cortex layer IIa") AnnotationAssertion( "UBERON:0022340") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "piriform cortex layer 2a") SubClassOf( ) SubClassOf(Annotation( "nlx") ) SubClassOf(Annotation( "nlx") ObjectSomeValuesFrom( )) # Class: (piriform cortex layer 2b) AnnotationAssertion(Annotation( "NLXANAT:091008") "Deeper of two subdivisions of piriform layer 2 characterized by more densely packed cell bodies dominated by pyramidal cell bodies.") AnnotationAssertion( "NLXANAT:091008") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0022341") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "piriform cortex layer 2b") SubClassOf( ) SubClassOf(Annotation( "nlx") ) SubClassOf(Annotation( "nlx") ObjectSomeValuesFrom( )) # Class: (dentate gyrus molecular layer middle) AnnotationAssertion( "FMA:277810") AnnotationAssertion( "NLXANAT:1008003") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NLXANAT:1008003") "DG middle stratum moleculare") AnnotationAssertion(Annotation( "NLXANAT:1008003") "middle layer of dentate gyrus molecular layer") AnnotationAssertion( "UBERON:0022346") AnnotationAssertion(rdfs:label "dentate gyrus molecular layer middle") SubClassOf( ) SubClassOf(Annotation( "nlx") ObjectSomeValuesFrom( )) # Class: (dentate gyrus molecular layer inner) AnnotationAssertion(Annotation( "NLXANAT:1008004") "Inner third of the dentate gyrus.") AnnotationAssertion( "FMA:277812") AnnotationAssertion( "NLXANAT:1008004") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NLXANAT:1008004") "DG inner stratum moleculare") AnnotationAssertion(Annotation( "NLXANAT:1008004") "inner layer of dentate gyrus molecular layer") AnnotationAssertion( "UBERON:0022347") AnnotationAssertion(rdfs:label "dentate gyrus molecular layer inner") SubClassOf( ) SubClassOf(Annotation( "nlx") ObjectSomeValuesFrom( )) # Class: (dentate gyrus granule cell layer inner blade) AnnotationAssertion( "NLXANAT:1008005") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NLXANAT:1008005") "enclosed blade of stratum granulare") AnnotationAssertion(Annotation( "NLXANAT:1008005") "extrapyramidal blade dentate gyrus granule cell layer") AnnotationAssertion(Annotation( "NLXANAT:1008005") "extrapyramidal blade of stratum granulare") AnnotationAssertion(Annotation( "NLXANAT:1008005") "inner blade of dentate gyrus granule cell layer") AnnotationAssertion(Annotation( "NLXANAT:1008005") "inner blade of stratum granulare") AnnotationAssertion( "UBERON:0022348") AnnotationAssertion(rdfs:label "dentate gyrus granule cell layer inner blade") SubClassOf( ) SubClassOf(Annotation( "nlx") ObjectSomeValuesFrom( )) # Class: (dentate gyrus granule cell layer outer blade) AnnotationAssertion( "NLXANAT:1008006") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NLXANAT:1008006") "exposed blade of stratum granulare") AnnotationAssertion(Annotation( "NLXANAT:1008006") "infrapyramidal blade dentate gyrus granule cell layer") AnnotationAssertion(Annotation( "NLXANAT:1008006") "infrapyramidal blade of stratum granulare") AnnotationAssertion(Annotation( "NLXANAT:1008006") "outer blade of dentate gyrus granule cell layer") AnnotationAssertion(Annotation( "NLXANAT:1008006") "outer blade of stratum granulare") AnnotationAssertion( "UBERON:0022349") AnnotationAssertion(rdfs:label "dentate gyrus granule cell layer outer blade") SubClassOf( ) SubClassOf(Annotation( "nlx") ObjectSomeValuesFrom( )) # Class: (visceral serous membrane) AnnotationAssertion(Annotation( ) "Serous membrane layer that is adjacent to and lines an organ.") AnnotationAssertion( "FMA:15860") AnnotationAssertion(Annotation( "FMA:15860") "visceral wall of serous membrane") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0022350") AnnotationAssertion(rdfs:label "visceral serous membrane") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (parietal serous membrane) AnnotationAssertion(Annotation( ) "Serous membrane layer that lines to a body cavity.") AnnotationAssertion(Annotation( "MA:0002448") "cavity lining") AnnotationAssertion( "FMA:15859") AnnotationAssertion( "MA:0002448") AnnotationAssertion(Annotation( "FMA:15859") "parietal wall of serous membrane") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0022351") AnnotationAssertion(rdfs:label "parietal serous membrane") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (medial orbital frontal cortex) AnnotationAssertion(Annotation( "BIRNLEX:1249") "Component of the orbtial frontal cortex. The rostral boundary is the first slice where the medial orbital gyrus became visible whereas the caudal boundary is the disappearance of the medial orbital gyrus/gyrus rectus. The medial and lateral boundaries are the cingulate cortex on the u2018inflatedu2019 surface and the medial bank of the superior frontal gyrus (or the cingulate gyrus when visible) respectively (Christine Fennema-Notestine).") AnnotationAssertion(Annotation( ) "frontal medial cortex") AnnotationAssertion( "BIRNLEX:1249") AnnotationAssertion( "FMA:273320") AnnotationAssertion(Annotation( ) "medial orbitofrontal cortex") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0022352") AnnotationAssertion(rdfs:label "medial orbital frontal cortex") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "NIFSTD"^^xsd:string) ObjectSomeValuesFrom( )) DisjointClasses(Annotation( "lexical"^^xsd:string) ) # Class: (posterior cingulate cortex) AnnotationAssertion(Annotation( "BIRNLEX:950") "Component of the cingulate cortex. The rostral and caudal extent were the caudal anterior and the isthmus divisions of the cingulate cortex respectively. The medial and lateral boundaries were the corpus callosum and as the superior frontal gyrus and/or paracentral lobule respectively (Christine Fennema-Notestine).") AnnotationAssertion( "check relationship to gyrus. See https://github.com/obophenotype/uberon/issues/626") AnnotationAssertion(Annotation( ) "posterior cingulate") AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:950") AnnotationAssertion( "BTO:0004250") AnnotationAssertion( "EFO:0002471") AnnotationAssertion( "FMA:271593") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "cingulate gyrus, posterior division") AnnotationAssertion(Annotation( ) "posterior cingular cortex") AnnotationAssertion( "UBERON:0022353") AnnotationAssertion(rdfs:label "posterior cingulate cortex") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "NIFSTD"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (basal layer of endometrium) AnnotationAssertion(Annotation( ) "The layer of endometrial epithelium adjacent to the uterine cavity.") AnnotationAssertion( "FMA:86492") AnnotationAssertion( "NCIT:C32189") AnnotationAssertion( "pars basalis of endometrium") AnnotationAssertion(Annotation( "FMA:86492") "stratum basalis of endometrium") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0022355") AnnotationAssertion(rdfs:label "basal layer of endometrium") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (outer layer of endometrium) AnnotationAssertion(Annotation( ) "The layer of endometrial epithelium adjacent to the myometrium.") AnnotationAssertion( "FMA:86493") AnnotationAssertion( "NCIT:C32642") AnnotationAssertion(Annotation( "FMA:86493") "functional layer of endometrium") AnnotationAssertion(Annotation( "FMA:86493") "stratum functionalis of endometrium") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0022356") AnnotationAssertion(rdfs:label "outer layer of endometrium") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (mesentery of ileum) AnnotationAssertion( "FMA:14652") AnnotationAssertion(Annotation( "FMA:14652") "ileal mesentery") AnnotationAssertion(Annotation( "FMA:14652") "ileum mesentery") AnnotationAssertion( "mesoileum") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0022357") AnnotationAssertion(rdfs:label "mesentery of ileum") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (placenta blood vessel) AnnotationAssertion(Annotation( "GO:0060674") "A blood vessel of the placenta.") AnnotationAssertion( "placental vessel") AnnotationAssertion( ) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0022358") AnnotationAssertion(rdfs:label "placenta blood vessel") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (male mammary gland duct) AnnotationAssertion(Annotation( ) "A mammary gland duct that is part of a male organism. This structure typically regresses.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0022360") AnnotationAssertion(rdfs:label "male mammary gland duct") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lung field) AnnotationAssertion(Annotation( "GOC:dph") Annotation( "GOC:mtg_lung") "A specific region of the foregut into the area in which the lung will develop.") AnnotationAssertion( ) AnnotationAssertion( "lung field") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0022361") AnnotationAssertion(rdfs:label "lung field") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (occipital fusiform gyrus) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "DHBA:12152") AnnotationAssertion( "FMA:71033") AnnotationAssertion(Annotation( "FMA:71033") "occipital fusiform gyrus (OF)") AnnotationAssertion(Annotation( "DHBA:12152") "occipitotemporal (fusiform) gyrus, occipital part") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "DHBA:12152") Annotation( ) "FuGo") AnnotationAssertion( "UBERON:0022364") AnnotationAssertion(rdfs:label "occipital fusiform gyrus") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (inferior lateral occipital cortex) AnnotationAssertion( ) AnnotationAssertion( "FMA:71034") AnnotationAssertion(Annotation( ) "lateral occipital cortex, inferior division") AnnotationAssertion(Annotation( "FMA:71034") "lateral occipital cortex, inferior division (OLI)") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0022367") AnnotationAssertion(rdfs:label "inferior lateral occipital cortex") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (superior lateral occipital cortex) AnnotationAssertion( ) AnnotationAssertion( "FMA:71035") AnnotationAssertion(Annotation( ) "lateral occipital cortex, superior division") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0022368") AnnotationAssertion(rdfs:label "superior lateral occipital cortex") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (anterior parahippocampal gyrus) AnnotationAssertion(Annotation( ) "The part of the parahippocampal gyrus that includes the perirhinal and entorhinal cortices.") AnnotationAssertion( ) AnnotationAssertion( "DHBA:12163") AnnotationAssertion( "FMA:71039") AnnotationAssertion(Annotation( ) "parahippocampal gyrus, anterior division") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "DHBA:12163") Annotation( ) "APH") AnnotationAssertion( "UBERON:0022383") AnnotationAssertion(rdfs:label "anterior parahippocampal gyrus") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (posterior parahippocampal white matter) AnnotationAssertion( ) AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:827") "posterior parahippocampal white matter") AnnotationAssertion(Annotation( "NeuroNames:827") Annotation( ) "substantia medullaris parahippocampalis posterior") AnnotationAssertion( "UBERON:0022394") AnnotationAssertion(rdfs:label "posterior parahippocampal white matter") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (temporal fusiform gyrus) AnnotationAssertion( ) AnnotationAssertion( "DHBA:12143") AnnotationAssertion(Annotation( "DHBA:12143") "occipitotemporal (fusiform) gyrus, temporal part") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "DHBA:12143") Annotation( ) "FuGt") AnnotationAssertion( "UBERON:0022395") AnnotationAssertion(rdfs:label "temporal fusiform gyrus") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (anterior temporal fusiform gyrus) AnnotationAssertion( ) AnnotationAssertion(Annotation( ) "occipitotemporal (fusiform) gyrus, anterior division") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0022396") AnnotationAssertion(rdfs:label "anterior temporal fusiform gyrus") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses(Annotation( "lexical"^^xsd:string) ) # Class: (posterior temporal fusiform gyrus) AnnotationAssertion( ) AnnotationAssertion(Annotation( ) "occipitotemporal (fusiform) gyrus, posterior division") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0022397") AnnotationAssertion(rdfs:label "posterior temporal fusiform gyrus") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (paracingulate gyrus) AnnotationAssertion( "DHBA:146034872") AnnotationAssertion( "FMA:71037") AnnotationAssertion(Annotation( "FMA:71037") "paracingulate gyrus (PAC)") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "DHBA:146034872") Annotation( ) "PaCG") AnnotationAssertion( "UBERON:0022398") AnnotationAssertion(rdfs:label "paracingulate gyrus") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "DHBA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (temporal part of superior longitudinal fasciculus) AnnotationAssertion( "superior longitudinal fasciculus, temporal division") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0022420") AnnotationAssertion(rdfs:label "temporal part of superior longitudinal fasciculus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pontocerebellar tract) AnnotationAssertion(Annotation( ) "The second order neuron fibers of the corticopontocerebellar tracts that cross to the other side of the pons and run within the middle cerebellar peduncles, from the pons to the contralateral cerebellum.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "DHBA:12769") AnnotationAssertion( "HBA:265505470") AnnotationAssertion(Annotation( ) Annotation( ) "fibrae pontocerebellaris") AnnotationAssertion(Annotation( ) "pontine crossing tract") AnnotationAssertion(Annotation( "NeuroNames:1345") "pontocerebellar fibers") AnnotationAssertion(Annotation( "NeuroNames:1345") Annotation( ) "tractus pontocerebellaris") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "DHBA:12769") Annotation( ) "pncb") AnnotationAssertion( "UBERON:0022421") AnnotationAssertion(rdfs:label "pontocerebellar tract") SubClassOf( ) SubClassOf(Annotation( "DHBA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (sagulum nucleus) AnnotationAssertion(Annotation( "NLX:64080") "A collection of principally small and medium-sized cells in the midbrain tegmentum lying at the margin of the midbrain adjacent to the nuclei of the lateral lemniscus.") AnnotationAssertion( ) AnnotationAssertion( "DHBA:12313") AnnotationAssertion( "FMA:77492") AnnotationAssertion( "HBA:9486") AnnotationAssertion( "NLX:64080") AnnotationAssertion(Annotation( "FMA:77492") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "nucleus saguli") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "HBA:9486") Annotation( ) "Sag") AnnotationAssertion(Annotation( "NLX:64080") "nucleus sagulum") AnnotationAssertion(Annotation( "NeuroNames:1308") Annotation( ) "nucleus sagulum") AnnotationAssertion( "sagular nucleus") AnnotationAssertion(Annotation( "NeuroNames:1308") Annotation( ) "sagulum") AnnotationAssertion( "UBERON:0022423") AnnotationAssertion(rdfs:label "sagulum nucleus") SubClassOf( ) # Class: (supragenual nucleus of pontine tegmentum) AnnotationAssertion(Annotation( "NeuroNames:1981") "A group of neurons embedded in the pontine central gray of the pontine tegmentum. Located dorsal to the internal genu of the facial nerve, it is found in the human ( Paxinos-2012 ), the macaque ( Paxinos-2009a ), the rat ( Swanson-2004 ), and the mouse ( Franklin-2008 ). Functionally it is part of the dorsal pontine gray of the subcortical motor system ( Swanson-2004 ).") AnnotationAssertion( ) AnnotationAssertion( "DHBA:12662") AnnotationAssertion( "DMBA:17190") AnnotationAssertion(Annotation( "NeuroNames:1981") "supragenual nucleus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "DHBA:12662") Annotation( ) "SGe") AnnotationAssertion( "UBERON:0022424") AnnotationAssertion(rdfs:label "supragenual nucleus of pontine tegmentum") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "DHBA"^^xsd:string) Annotation( "Neuronames-def") ObjectSomeValuesFrom( )) # Class: (anterior corona radiata) AnnotationAssertion( ) AnnotationAssertion( "DHBA:15541") AnnotationAssertion(Annotation( "DHBA:15541") "anterior portion of corona radiata") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "DHBA:15541") Annotation( ) "cor-a") AnnotationAssertion( "UBERON:0022425") AnnotationAssertion(rdfs:label "anterior corona radiata") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "DHBA"^^xsd:string) ObjectSomeValuesFrom( )) DisjointClasses(Annotation( "lexical"^^xsd:string) ) # Class: (superior corona radiata) AnnotationAssertion( ) AnnotationAssertion( "DHBA:15542") AnnotationAssertion(Annotation( "DHBA:15542") "superior portion of corona radiata") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "DHBA:15542") Annotation( ) "cor-s") AnnotationAssertion( "UBERON:0022426") AnnotationAssertion(rdfs:label "superior corona radiata") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "DHBA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (posterior corona radiata) AnnotationAssertion( ) AnnotationAssertion( "DHBA:15543") AnnotationAssertion(Annotation( "DHBA:15543") "posterior portion of corona radiata") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "DHBA:15543") Annotation( ) "cor-p") AnnotationAssertion( "UBERON:0022427") AnnotationAssertion(rdfs:label "posterior corona radiata") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "DHBA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (cingulate cortex cingulum) AnnotationAssertion( "DHBA:15539") AnnotationAssertion( "cingulum (cingulate gyrus)") AnnotationAssertion(Annotation( "DHBA:15539") "cingulum bundle in cingulate cortex") AnnotationAssertion( "cingulum bundle in cingulate gyrus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "DHBA:15539") Annotation( ) "cb-cx") AnnotationAssertion( "UBERON:0022428") AnnotationAssertion(rdfs:label "cingulate cortex cingulum") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (temporal cortex cingulum) AnnotationAssertion( "DHBA:15540") AnnotationAssertion( "cingulum (temporal gyrus)") AnnotationAssertion(Annotation( "DHBA:15540") "cingulum bundle in temporal cortex") AnnotationAssertion( "cingulum bundle in temporal gyrus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "DHBA:15540") Annotation( ) "cb-tx") AnnotationAssertion( "UBERON:0022429") AnnotationAssertion(rdfs:label "temporal cortex cingulum") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (hippocampus cortex cingulum) AnnotationAssertion( "cingulum (Ammon's horn)") AnnotationAssertion( "cingulum (hippocampus)") AnnotationAssertion( "cingulum bundle in hippocampus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0022430") AnnotationAssertion(rdfs:label "hippocampus cortex cingulum") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete simian fossa (macaque)) AnnotationAssertion( "BIRNLEX:1616") AnnotationAssertion( "UMLS:C0694579") AnnotationAssertion( "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=46") AnnotationAssertion(Annotation( "BIRNLEX:1616") Annotation( ) "FS") AnnotationAssertion(Annotation( "BIRNLEX:1616") Annotation( ) "simian fossa") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BIRNLEX:1616") "fossa simiarum") AnnotationAssertion(Annotation( "NeuroNames:46") Annotation( ) "fossa simiarum") AnnotationAssertion(Annotation( "NeuroNames:46") "simian fossa") AnnotationAssertion( "UBERON:0022431") AnnotationAssertion(rdfs:label "obsolete simian fossa (macaque)") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (primary superior olive) AnnotationAssertion(Annotation( "BIRNLEX:900") "Part of the superior olivary complex of nuclei in the caudal pontine tegmentum, situated within the trapezoid body in humans. (Brodal, Neurological Anatomy, 3rd edition, 1981, pg 617). In many species, it comprises a medial superior olivary nucleus and a lateral superior olivary nucleus.") AnnotationAssertion( "Wikipedia includes Medial nucleus of the trapezoid body. Wikipedia:Superior_olivary_complex#Primary_nuclei") AnnotationAssertion( "many sources refer to this simply as the 'superior olive' or the 'superior olivary nucleus'. However, this is confusing as superior olive is sometimes used to denote the full SOC, which includes periolvary nuclei[https://github.com/obophenotype/uberon/issues/631]") AnnotationAssertion(Annotation( "BIRNLEX:900") Annotation( ) "superior olive") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BAMS:SOl") AnnotationAssertion( "BIRNLEX:900") AnnotationAssertion( "DHBA:12468") AnnotationAssertion( "HBA:9182") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0022434") AnnotationAssertion(rdfs:label "primary superior olive") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "NIFSTD"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (dorsal periolivary nucleus) AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) Annotation( ) "nuclei periolivares") AnnotationAssertion(Annotation( "FMA:72475") "peri-olivary nuclei") AnnotationAssertion( "DHBA:15561") AnnotationAssertion( "DMBA:17260") AnnotationAssertion( "FMA:72475") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "DPO") AnnotationAssertion(Annotation( "DMBA:17260") Annotation( ) "DPeO") AnnotationAssertion( "UBERON:0022437") AnnotationAssertion(rdfs:label "dorsal periolivary nucleus") SubClassOf( ) SubClassOf(Annotation( "Wikipedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (rostral anterior cingulate cortex) AnnotationAssertion(Annotation( "BIRNLEX:975") "Component of the cingulate cortex. The rostral boundary was the first appearance of the cingulate sulcus (inferior to the superior frontal sulcus) whereas the caudal boundary was the first appearance of the genu of the corpus callosum. The medial boundary was the medial aspect of the cortex. The supero-lateral boundary was the superior frontal gyrus whereas the infero-lateral boundary was defined as the medial division of the orbitofrontal gyrus (Christine Fennema-Notestine).") AnnotationAssertion( "BIRNLEX:975") AnnotationAssertion( "FMA:271599") AnnotationAssertion(Annotation( "BIRNLEX:975") Annotation( ) "rostral anterior cingulate cortex") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0022438") AnnotationAssertion(rdfs:label "rostral anterior cingulate cortex") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "NIFSTD"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (olfactory entorhinal cortex) AnnotationAssertion(Annotation( "BIRNLEX:2705") "A part of the entorhinal area defined on the basis of connectivity. It is the rostral portion, which receives a projection from the olfactory bulb (Price-90)-Adapted from Brain Info.") AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:2705") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BIRNLEX:2705") Annotation( ) "EOl") AnnotationAssertion( "UBERON:0022453") AnnotationAssertion(rdfs:label "olfactory entorhinal cortex") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "NIFSTD"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (primary olfactory cortex) AnnotationAssertion(Annotation( "BIRNLEX:2706") "A group of structures defined by connectivity, namely, structures that receive axons from the olfactory bulb. They include the anterior olfactory nucleus, the anterior perforated substance, the rostral part of the medial amygdaloid nucleus (anterior cortical nucleus of amygdala), and structures in the anterior part of the parahippocampal gyrus, namely, the prepyriform area, most of the periamygdaloid area, and the rostral part of the entorhinal area (Price-90). Note that some authors have regarded the olfactory bulb itself as the primary olfactory area and the areas to which it projects as secondary (Anthoney-94). In the mouse (Dong-2004) and the rat (Swanson-2004), olfactory areas include the olfactory bulb, accessory olfactory bulb, anterior olfactory nucleus, tenia tecta, prepyriform area, postpiriform transition area, piriform amygdaloid area, nucleus of lateral olfactory tract, and cortical amygdaloid area.") AnnotationAssertion( "BIRNLEX:2706") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BIRNLEX:2706") "primary olfactory areas") AnnotationAssertion( "UBERON:0022469") AnnotationAssertion(rdfs:label "primary olfactory cortex") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "NIFSTD"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (obsolete predominantly gray regional part of pretectal region) AnnotationAssertion( "BIRNLEX:1003") AnnotationAssertion(Annotation( "BIRNLEX:1003") "predominantly gray regional part of pretectal region") AnnotationAssertion(Annotation( "BIRNLEX:1003") Annotation( ) "predominantly gray regional part of pretectal region") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0022480") AnnotationAssertion(rdfs:label "obsolete predominantly gray regional part of pretectal region") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete regional part of organ cavity) AnnotationAssertion( "BIRNLEX:1039") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0022515") AnnotationAssertion(rdfs:label "obsolete regional part of organ cavity") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (pericalcarine cortex) AnnotationAssertion(Annotation( "BIRNLEX:1059") "Component of the parietal lobe. The rostral boundary of the pericalcarine cortex was the first appearance of the calcarine sulcus whereas the caudal boundary was the most posterior coronal slice where the calcarine sulcus was visualized. The medial and lateral boundaries were the medial portion of the temporal and occipital cortices and the inferomedial end of the calcarine sulcus respectively (Christine Fennema-Notestine).") AnnotationAssertion( "BIRNLEX:1059") AnnotationAssertion(Annotation( "BIRNLEX:1059") "pericalcarine cortex") AnnotationAssertion(Annotation( "BIRNLEX:1059") Annotation( ) "pericalcarine cortex") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0022534") AnnotationAssertion(rdfs:label "pericalcarine cortex") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "NIFSTD"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (obsolete regional part of solitary nucleus) AnnotationAssertion( "BIRNLEX:1068") AnnotationAssertion(Annotation( "BIRNLEX:1068") "regional part of solitary nucleus") AnnotationAssertion(Annotation( "BIRNLEX:1068") Annotation( ) "regional part of solitary nucleus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0022543") AnnotationAssertion(rdfs:label "obsolete regional part of solitary nucleus") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete regional part of a lobe of the cerebellum) AnnotationAssertion( "BIRNLEX:1094") AnnotationAssertion(Annotation( "BIRNLEX:1094") "regional part of a lobe of the cerebellum") AnnotationAssertion(Annotation( "BIRNLEX:1094") Annotation( ) "regional part of a lobe of the cerebellum") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0022569") AnnotationAssertion(rdfs:label "obsolete regional part of a lobe of the cerebellum") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete regional part of body system) AnnotationAssertion( "BIRNLEX:11") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0022575") AnnotationAssertion(rdfs:label "obsolete regional part of body system") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete regional part of peripheral nervous system) AnnotationAssertion( "BIRNLEX:1122") AnnotationAssertion(Annotation( "BIRNLEX:1122") "regional part of peripheral nervous system") AnnotationAssertion(Annotation( "BIRNLEX:1122") Annotation( ) "regional part of peripheral nervous system") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0022598") AnnotationAssertion(rdfs:label "obsolete regional part of peripheral nervous system") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete regional part of eye) AnnotationAssertion( "BIRNLEX:1145") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0022620") AnnotationAssertion(rdfs:label "obsolete regional part of eye") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete predominantly gray regional part of epithalamus) AnnotationAssertion( "BIRNLEX:1174") AnnotationAssertion(Annotation( "BIRNLEX:1174") Annotation( ) "predominantly gray regional part of epithalamus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0022647") AnnotationAssertion(rdfs:label "obsolete predominantly gray regional part of epithalamus") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (habenulo-interpeduncular tract of diencephalon) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:1176") AnnotationAssertion(Annotation( "BIRNLEX:1176") "habenulo-interpeduncular tract of diencephalon") AnnotationAssertion(Annotation( "BIRNLEX:1176") Annotation( ) "habenulo-interpeduncular tract of diencephalon") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0022649") AnnotationAssertion(rdfs:label "habenulo-interpeduncular tract of diencephalon") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "ZFA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (obsolete regional part of parietal lobe) AnnotationAssertion( "BIRNLEX:1177") AnnotationAssertion(Annotation( "BIRNLEX:1177") "regional part of parietal lobe") AnnotationAssertion(Annotation( "BIRNLEX:1177") Annotation( ) "regional part of parietal lobe") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0022650") AnnotationAssertion(rdfs:label "obsolete regional part of parietal lobe") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete regional part of ear) AnnotationAssertion( "BIRNLEX:1181") AnnotationAssertion(Annotation( "BIRNLEX:1181") "regional part of ear") AnnotationAssertion(Annotation( "BIRNLEX:1181") Annotation( ) "regional part of ear") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0022654") AnnotationAssertion(rdfs:label "obsolete regional part of ear") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete regional part of occipital lobe) AnnotationAssertion( "BIRNLEX:1188") AnnotationAssertion(Annotation( "BIRNLEX:1188") "regional part of occipital lobe") AnnotationAssertion(Annotation( "BIRNLEX:1188") Annotation( ) "regional part of occipital lobe") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0022660") AnnotationAssertion(rdfs:label "obsolete regional part of occipital lobe") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete predominantly gray regional part of lateral hypothalamic region) AnnotationAssertion( "BIRNLEX:1193") AnnotationAssertion(Annotation( "BIRNLEX:1193") Annotation( ) "predominantly gray regional part of lateral hypothalamic region") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0022665") AnnotationAssertion(rdfs:label "obsolete predominantly gray regional part of lateral hypothalamic region") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete regional part of cerebral peduncle) AnnotationAssertion( "BIRNLEX:1209") AnnotationAssertion(Annotation( "BIRNLEX:1209") Annotation( ) "regional part of cerebral peduncle") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0022681") AnnotationAssertion(rdfs:label "obsolete regional part of cerebral peduncle") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (orbital gyri complex) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:1223") AnnotationAssertion(Annotation( "BIRNLEX:1223") Annotation( ) "orbital gyri complex") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BIRNLEX:1223") "orgital_gyri") AnnotationAssertion( "UBERON:0022695") AnnotationAssertion(rdfs:label "orbital gyri complex") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "NIFSTD"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (obsolete predominantly gray regional part of posterior hypothalamic region) AnnotationAssertion( "BIRNLEX:1229") AnnotationAssertion(Annotation( "BIRNLEX:1229") "predominantly gray regional part of posterior hypothalamic region") AnnotationAssertion(Annotation( "BIRNLEX:1229") Annotation( ) "predominantly gray regional part of posterior hypothalamic region") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0022701") AnnotationAssertion(rdfs:label "obsolete predominantly gray regional part of posterior hypothalamic region") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (lateral orbital frontal cortex) AnnotationAssertion(Annotation( "BIRNLEX:1244") "Component of the orbtial frontal cortex The rostral boundary is the first slice where the lateral orbital gyrus is apparent with the frontomarginal sulcus whereas the caudal boundary is the disappearance of the lateral orbital gyrus. The medial and lateral boundaries are the midpoint of the olfactory sulcus and the lateral bank of the lateral orbital sulcus and/or the circular insular sulcus respectively (Christine Fennema-Notestine).") AnnotationAssertion( "BIRNLEX:1244") AnnotationAssertion(Annotation( "BIRNLEX:1244") "lateral orbital frontal cortex") AnnotationAssertion(Annotation( "BIRNLEX:1244") Annotation( ) "lateral orbital frontal cortex") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0022716") AnnotationAssertion(rdfs:label "lateral orbital frontal cortex") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "NIFSTD"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (transverse frontopolar gyri complex) AnnotationAssertion( "BIRNLEX:1258") AnnotationAssertion(Annotation( "BIRNLEX:1258") "transverse frontopolar gyri complex") AnnotationAssertion(Annotation( "BIRNLEX:1258") Annotation( ) "transverse frontopolar gyri complex") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BIRNLEX:1258") "transverse frontopolar gyri") AnnotationAssertion( "UBERON:0022730") AnnotationAssertion(rdfs:label "transverse frontopolar gyri complex") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "NIFSTD"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (obsolete superficial feature part of midbrain tectum) AnnotationAssertion( "BIRNLEX:1260") AnnotationAssertion(Annotation( "BIRNLEX:1260") "superficial feature part of midbrain tectum") AnnotationAssertion(Annotation( "BIRNLEX:1260") Annotation( ) "superficial feature part of midbrain tectum") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0022732") AnnotationAssertion(rdfs:label "obsolete superficial feature part of midbrain tectum") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete superficial feature part of pons) AnnotationAssertion( "BIRNLEX:1268") AnnotationAssertion(Annotation( "BIRNLEX:1268") "superficial feature part of pons") AnnotationAssertion(Annotation( "BIRNLEX:1268") Annotation( ) "superficial feature part of pons") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0022740") AnnotationAssertion(rdfs:label "obsolete superficial feature part of pons") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete regional part of central nervous system) AnnotationAssertion( "BIRNLEX:1269") AnnotationAssertion(Annotation( "BIRNLEX:1269") "regional part of central nervous system") AnnotationAssertion(Annotation( "BIRNLEX:1269") Annotation( ) "regional part of central nervous system") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0022741") AnnotationAssertion(rdfs:label "obsolete regional part of central nervous system") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete regional part of sacral spinal cord) AnnotationAssertion( "BIRNLEX:1284") AnnotationAssertion(Annotation( "BIRNLEX:1284") "regional part of sacral spinal cord") AnnotationAssertion(Annotation( "BIRNLEX:1284") Annotation( ) "regional part of sacral spinal cord") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0022756") AnnotationAssertion(rdfs:label "obsolete regional part of sacral spinal cord") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete superficial feature part of intermediate hypothalamic region) AnnotationAssertion( "BIRNLEX:1289") AnnotationAssertion(Annotation( "BIRNLEX:1289") "superficial feature part of intermediate hypothalamic region") AnnotationAssertion(Annotation( "BIRNLEX:1289") Annotation( ) "superficial feature part of intermediate hypothalamic region") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0022761") AnnotationAssertion(rdfs:label "obsolete superficial feature part of intermediate hypothalamic region") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (composite part spanning multiple base regional parts of brain) AnnotationAssertion( "BIRNLEX:1304") AnnotationAssertion(Annotation( "BIRNLEX:1304") "composite part spanning multiple base regional parts of brain") AnnotationAssertion(Annotation( "BIRNLEX:1304") Annotation( ) "composite part spanning multiple base regional parts of brain") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0022776") AnnotationAssertion(rdfs:label "composite part spanning multiple base regional parts of brain") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete regional part of medial mammillary nucleus) AnnotationAssertion( "BIRNLEX:1306") AnnotationAssertion(Annotation( "BIRNLEX:1306") "regional part of medial mammillary nucleus") AnnotationAssertion(Annotation( "BIRNLEX:1306") Annotation( ) "regional part of medial mammillary nucleus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0022778") AnnotationAssertion(rdfs:label "obsolete regional part of medial mammillary nucleus") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (paraventricular nucleus of the hypothalamus magnocellular division - posterior magnocellular part medial zone) AnnotationAssertion( "BIRNLEX:1312") AnnotationAssertion( "HBA:4584") AnnotationAssertion(Annotation( "BIRNLEX:1312") "paraventricular nucleus of the hypothalamus magnocellular division - posterior magnocellular part medial zone") AnnotationAssertion(Annotation( "BIRNLEX:1312") Annotation( ) "paraventricular nucleus of the hypothalamus magnocellular division - posterior magnocellular part medial zone") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0022783") AnnotationAssertion(rdfs:label "paraventricular nucleus of the hypothalamus magnocellular division - posterior magnocellular part medial zone") SubClassOf( ) # Class: (paraventricular nucleus of the hypothalamus magnocellular division - posterior magnocellular part lateral zone) AnnotationAssertion( "BIRNLEX:1320") AnnotationAssertion( "HBA:4585") AnnotationAssertion(Annotation( "BIRNLEX:1320") "paraventricular nucleus of the hypothalamus magnocellular division - posterior magnocellular part lateral zone") AnnotationAssertion(Annotation( "BIRNLEX:1320") Annotation( ) "paraventricular nucleus of the hypothalamus magnocellular division - posterior magnocellular part lateral zone") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0022791") AnnotationAssertion(rdfs:label "paraventricular nucleus of the hypothalamus magnocellular division - posterior magnocellular part lateral zone") SubClassOf( ) # Class: (obsolete superficial feature part of diencephalon) AnnotationAssertion( "BIRNLEX:1351") AnnotationAssertion(Annotation( "BIRNLEX:1351") "superficial feature part of diencephalon") AnnotationAssertion(Annotation( "BIRNLEX:1351") Annotation( ) "superficial feature part of diencephalon") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0022822") AnnotationAssertion(rdfs:label "obsolete superficial feature part of diencephalon") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete predominantly gray regional part of medullary raphe nuclear complex) AnnotationAssertion( "BIRNLEX:1357") AnnotationAssertion(Annotation( "BIRNLEX:1357") "predominantly gray regional part of medullary raphe nuclear complex") AnnotationAssertion(Annotation( "BIRNLEX:1357") Annotation( ) "predominantly gray regional part of medullary raphe nuclear complex") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0022828") AnnotationAssertion(rdfs:label "obsolete predominantly gray regional part of medullary raphe nuclear complex") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete regional part of oculomotor nuclear complex) AnnotationAssertion( "BIRNLEX:1405") AnnotationAssertion(Annotation( "BIRNLEX:1405") Annotation( ) "regional part of oculomotor nuclear complex") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0022877") AnnotationAssertion(rdfs:label "obsolete regional part of oculomotor nuclear complex") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete regional part of red nucleus) AnnotationAssertion( "BIRNLEX:1418") AnnotationAssertion(Annotation( "BIRNLEX:1418") "regional part of red nucleus") AnnotationAssertion(Annotation( "BIRNLEX:1418") Annotation( ) "regional part of red nucleus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0022890") AnnotationAssertion(rdfs:label "obsolete regional part of red nucleus") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete regional part of habenula) AnnotationAssertion( "BIRNLEX:1423") AnnotationAssertion(Annotation( "BIRNLEX:1423") "regional part of habenula") AnnotationAssertion(Annotation( "BIRNLEX:1423") Annotation( ) "regional part of habenula") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0022895") AnnotationAssertion(rdfs:label "obsolete regional part of habenula") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete predominantly gray regional part of midbrain tegmentum) AnnotationAssertion( "BIRNLEX:1465") AnnotationAssertion(Annotation( "BIRNLEX:1465") "predominantly gray regional part of midbrain tegmentum") AnnotationAssertion(Annotation( "BIRNLEX:1465") Annotation( ) "predominantly gray regional part of midbrain tegmentum") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0022937") AnnotationAssertion(rdfs:label "obsolete predominantly gray regional part of midbrain tegmentum") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (dorsal nerve root of sacral spinal cord) AnnotationAssertion( "BIRNLEX:1469") AnnotationAssertion(Annotation( "BIRNLEX:1469") "dorsal nerve root of sacral spinal cord") AnnotationAssertion(Annotation( "BIRNLEX:1469") Annotation( ) "dorsal nerve root of sacral spinal cord") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BIRNLEX:1469") "posterior nerve root of sacral spinal cord") AnnotationAssertion( "UBERON:0022941") AnnotationAssertion(rdfs:label "dorsal nerve root of sacral spinal cord") SubClassOf(Annotation( "NIFSTD"^^xsd:string) ) DisjointClasses(Annotation( "NIFSTD"^^xsd:string) ) # Class: (reticulospinal tract) AnnotationAssertion(Annotation( ) "The reticulospinal tract (or anterior reticulospinal tract) is an extrapyramidal motor tract which travels from the reticular formation.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:1471") AnnotationAssertion(Annotation( "BIRNLEX:1471") "reticulospinal tract") AnnotationAssertion(Annotation( "BIRNLEX:1471") Annotation( ) "reticulospinal tract") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0022943") AnnotationAssertion(rdfs:label "reticulospinal tract") SubClassOf(Annotation( "NIFSTD"^^xsd:string) ) SubClassOf(Annotation( "NIFSTD"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (obsolete predominantly white regional part of midbrain tegmentum) AnnotationAssertion( "BIRNLEX:1472") AnnotationAssertion(Annotation( "BIRNLEX:1472") "predominantly white regional part of midbrain tegmentum") AnnotationAssertion(Annotation( "BIRNLEX:1472") Annotation( ) "predominantly white regional part of midbrain tegmentum") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0022944") AnnotationAssertion(rdfs:label "obsolete predominantly white regional part of midbrain tegmentum") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete regional part of midbrain reticular formation) AnnotationAssertion( "BIRNLEX:1485") AnnotationAssertion(Annotation( "BIRNLEX:1485") "regional part of midbrain reticular formation") AnnotationAssertion(Annotation( "BIRNLEX:1485") Annotation( ) "regional part of midbrain reticular formation") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0022957") AnnotationAssertion(rdfs:label "obsolete regional part of midbrain reticular formation") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete regional part of cervical spinal cord) AnnotationAssertion( "BIRNLEX:1505") AnnotationAssertion(Annotation( "BIRNLEX:1505") "regional part of cervical spinal cord") AnnotationAssertion(Annotation( "BIRNLEX:1505") Annotation( ) "regional part of cervical spinal cord") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0022976") AnnotationAssertion(rdfs:label "obsolete regional part of cervical spinal cord") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete regional part of thalamus) AnnotationAssertion( "BIRNLEX:1517") AnnotationAssertion(Annotation( "BIRNLEX:1517") "regional part of thalamus") AnnotationAssertion(Annotation( "BIRNLEX:1517") Annotation( ) "regional part of thalamus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0022988") AnnotationAssertion(rdfs:label "obsolete regional part of thalamus") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete superficial feature part of medulla oblongata) AnnotationAssertion( "BIRNLEX:1526") AnnotationAssertion(Annotation( "BIRNLEX:1526") "superficial feature part of medulla oblongata") AnnotationAssertion(Annotation( "BIRNLEX:1526") Annotation( ) "superficial feature part of medulla oblongata") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0022997") AnnotationAssertion(rdfs:label "obsolete superficial feature part of medulla oblongata") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete predominantly white regional part of posterior hypothalamic region) AnnotationAssertion( "BIRNLEX:1536") AnnotationAssertion(Annotation( "BIRNLEX:1536") "predominantly white regional part of posterior hypothalamic region") AnnotationAssertion(Annotation( "BIRNLEX:1536") Annotation( ) "predominantly white regional part of posterior hypothalamic region") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0023007") AnnotationAssertion(rdfs:label "obsolete predominantly white regional part of posterior hypothalamic region") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete superficial feature part of posterior hypothalamic region) AnnotationAssertion( "BIRNLEX:1542") AnnotationAssertion(Annotation( "BIRNLEX:1542") "superficial feature part of posterior hypothalamic region") AnnotationAssertion(Annotation( "BIRNLEX:1542") Annotation( ) "superficial feature part of posterior hypothalamic region") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0023013") AnnotationAssertion(rdfs:label "obsolete superficial feature part of posterior hypothalamic region") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete predominantly white regional part of septum pellucidum) AnnotationAssertion( "BIRNLEX:1549") AnnotationAssertion(Annotation( "BIRNLEX:1549") "predominantly white regional part of septum pellucidum") AnnotationAssertion(Annotation( "BIRNLEX:1549") Annotation( ) "predominantly white regional part of septum pellucidum") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0023020") AnnotationAssertion(rdfs:label "obsolete predominantly white regional part of septum pellucidum") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete regional part of cerebral white matter) AnnotationAssertion( "BIRNLEX:1573") AnnotationAssertion(Annotation( "BIRNLEX:1573") "regional part of cerebral white matter") AnnotationAssertion(Annotation( "BIRNLEX:1573") Annotation( ) "regional part of cerebral white matter") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0023044") AnnotationAssertion(rdfs:label "obsolete regional part of cerebral white matter") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete regional part of hypophysis) AnnotationAssertion( "BIRNLEX:1576") AnnotationAssertion(Annotation( "BIRNLEX:1576") "regional part of hypophysis") AnnotationAssertion(Annotation( "BIRNLEX:1576") Annotation( ) "regional part of hypophysis") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0023047") AnnotationAssertion(rdfs:label "obsolete regional part of hypophysis") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete regional part of lumbar spinal cord) AnnotationAssertion( "BIRNLEX:1602") AnnotationAssertion(Annotation( "BIRNLEX:1602") "regional part of lumbar spinal cord") AnnotationAssertion(Annotation( "BIRNLEX:1602") Annotation( ) "regional part of lumbar spinal cord") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0023074") AnnotationAssertion(rdfs:label "obsolete regional part of lumbar spinal cord") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete predominantly white regional part of epithalamus) AnnotationAssertion( "BIRNLEX:1620") AnnotationAssertion(Annotation( "BIRNLEX:1620") "predominantly white regional part of epithalamus") AnnotationAssertion(Annotation( "BIRNLEX:1620") Annotation( ) "predominantly white regional part of epithalamus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0023092") AnnotationAssertion(rdfs:label "obsolete predominantly white regional part of epithalamus") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (posterodorsal nucleus of medial geniculate body) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:1622") AnnotationAssertion( "HBA:4447") AnnotationAssertion(Annotation( "BIRNLEX:1622") "posterodorsal nucleus of medial geniculate body") AnnotationAssertion(Annotation( "BIRNLEX:1622") Annotation( ) "posterodorsal nucleus of medial geniculate body") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BIRNLEX:1622") "nucleus corporis geniculati medialis, pars posterodorsalis") AnnotationAssertion(Annotation( "BIRNLEX:1622") "posterodorsal nucleus of medial geniculate complex") AnnotationAssertion( "UBERON:0023094") AnnotationAssertion(rdfs:label "posterodorsal nucleus of medial geniculate body") SubClassOf( ) SubClassOf(Annotation( "NIFSTD"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (obsolete regional part of temporal lobe) AnnotationAssertion( "BIRNLEX:1625") AnnotationAssertion(Annotation( "BIRNLEX:1625") "regional part of temporal lobe") AnnotationAssertion(Annotation( "BIRNLEX:1625") Annotation( ) "regional part of temporal lobe") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0023097") AnnotationAssertion(rdfs:label "obsolete regional part of temporal lobe") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete predominantly gray regional part of intermediate hypothalamic region) AnnotationAssertion( "BIRNLEX:1630") AnnotationAssertion(Annotation( "BIRNLEX:1630") "predominantly gray regional part of intermediate hypothalamic region") AnnotationAssertion(Annotation( "BIRNLEX:1630") Annotation( ) "predominantly gray regional part of intermediate hypothalamic region") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0023102") AnnotationAssertion(rdfs:label "obsolete predominantly gray regional part of intermediate hypothalamic region") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete predominantly gray regional part of hypothalamus) AnnotationAssertion( "BIRNLEX:1656") AnnotationAssertion(Annotation( "BIRNLEX:1656") "predominantly gray regional part of hypothalamus") AnnotationAssertion(Annotation( "BIRNLEX:1656") Annotation( ) "predominantly gray regional part of hypothalamus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0023127") AnnotationAssertion(rdfs:label "obsolete predominantly gray regional part of hypothalamus") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete regional part of septum) AnnotationAssertion( "BIRNLEX:1693") AnnotationAssertion(Annotation( "BIRNLEX:1693") "regional part of septum") AnnotationAssertion(Annotation( "BIRNLEX:1693") Annotation( ) "regional part of septum") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0023163") AnnotationAssertion(rdfs:label "obsolete regional part of septum") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (sub-lobar region) AnnotationAssertion( "BIRNLEX:1788") AnnotationAssertion(Annotation( "BIRNLEX:1788") Annotation( ) "sub-lobar region") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0023255") AnnotationAssertion(rdfs:label "sub-lobar region") SubClassOf(Annotation( "NIFSTD"^^xsd:string) ) # Class: (obsolete cytoarchitectural part of cerebral cortex) AnnotationAssertion( "BIRNLEX:2546") AnnotationAssertion(Annotation( "BIRNLEX:2546") "cytoarchitectural part of cerebral cortex") AnnotationAssertion(Annotation( "BIRNLEX:2546") Annotation( ) "cytoarchitectural part of cerebral cortex") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0023294") AnnotationAssertion(rdfs:label "obsolete cytoarchitectural part of cerebral cortex") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete regional part of ventral cochlear nucleus) AnnotationAssertion( "BIRNLEX:2570") AnnotationAssertion(Annotation( "BIRNLEX:2570") "regional part of ventral cochlear nucleus") AnnotationAssertion(Annotation( "BIRNLEX:2570") Annotation( ) "regional part of ventral cochlear nucleus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0023317") AnnotationAssertion(rdfs:label "obsolete regional part of ventral cochlear nucleus") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete predominantly gray part of medulla oblongata) AnnotationAssertion( "BIRNLEX:2633") AnnotationAssertion(Annotation( "BIRNLEX:2633") "predominantly gray part of medulla oblongata") AnnotationAssertion(Annotation( "BIRNLEX:2633") Annotation( ) "predominantly gray part of medulla oblongata") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0023362") AnnotationAssertion(rdfs:label "obsolete predominantly gray part of medulla oblongata") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (medullary anterior horn) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:2649") AnnotationAssertion( "FMA:72610") AnnotationAssertion(Annotation( "FMA:72610") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "cornu anterius medullaris") AnnotationAssertion(Annotation( "BIRNLEX:2649") "medullary anterior horn") AnnotationAssertion(Annotation( "BIRNLEX:2649") Annotation( ) "medullary anterior horn") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0023378") AnnotationAssertion(rdfs:label "medullary anterior horn") SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (medial subnucleus of solitary tract) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:2662") AnnotationAssertion( "HBA:9661") AnnotationAssertion(Annotation( "BIRNLEX:2662") "medial subnucleus of solitary tract") AnnotationAssertion(Annotation( "BIRNLEX:2662") Annotation( ) "medial subnucleus of solitary tract") AnnotationAssertion(Annotation( "NeuroNames:745") "medial subnucleus of the solitary tract") AnnotationAssertion(Annotation( "HBA:9661") Annotation( ) "solitary nucleus, left, meidal subnucleus") AnnotationAssertion(Annotation( ) Annotation( "HBA:9661") "solitary nucleus, medial subnucleus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BIRNLEX:2662") "medial part") AnnotationAssertion(Annotation( "BIRNLEX:2662") "nucleus of the solitary tract") AnnotationAssertion( "UBERON:0023390") AnnotationAssertion(rdfs:label "medial subnucleus of solitary tract") SubClassOf( ) SubClassOf(Annotation( "NIFSTD"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (obsolete regional part of spinal cord dorsal horn) AnnotationAssertion( "BIRNLEX:2671") AnnotationAssertion(Annotation( "BIRNLEX:2671") "regional part of spinal cord dorsal horn") AnnotationAssertion(Annotation( "BIRNLEX:2671") Annotation( ) "regional part of spinal cord dorsal horn") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0023399") AnnotationAssertion(rdfs:label "obsolete regional part of spinal cord dorsal horn") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete regional part of spinal cord gray commissure) AnnotationAssertion( "BIRNLEX:2675") AnnotationAssertion(Annotation( "BIRNLEX:2675") "regional part of spinal cord gray commissure") AnnotationAssertion(Annotation( "BIRNLEX:2675") Annotation( ) "regional part of spinal cord gray commissure") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0023401") AnnotationAssertion(rdfs:label "obsolete regional part of spinal cord gray commissure") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete regional part of amygdala) AnnotationAssertion( "BIRNLEX:2678") AnnotationAssertion(Annotation( "BIRNLEX:2678") "regional part of amygdala") AnnotationAssertion(Annotation( "BIRNLEX:2678") Annotation( ) "regional part of amygdala") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0023404") AnnotationAssertion(rdfs:label "obsolete regional part of amygdala") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (lateral amygdaloid nucleus, dorsolateral part) AnnotationAssertion( "BIRNLEX:2689") AnnotationAssertion(Annotation( "BIRNLEX:2689") "lateral amygdaloid nucleus, dorsolateral part") AnnotationAssertion(Annotation( "BIRNLEX:2689") Annotation( ) "lateral amygdaloid nucleus, dorsolateral part") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0023415") AnnotationAssertion(rdfs:label "lateral amygdaloid nucleus, dorsolateral part") SubClassOf( ) # Class: (lateral amygdaloid nucleus, ventrolateral part) AnnotationAssertion( "BIRNLEX:2690") AnnotationAssertion(Annotation( "BIRNLEX:2690") "lateral amygdaloid nucleus, ventrolateral part") AnnotationAssertion(Annotation( "BIRNLEX:2690") Annotation( ) "lateral amygdaloid nucleus, ventrolateral part") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0023416") AnnotationAssertion(rdfs:label "lateral amygdaloid nucleus, ventrolateral part") SubClassOf( ) # Class: (lateral amygdaloid nucleus, ventromedial part) AnnotationAssertion( "BIRNLEX:2691") AnnotationAssertion(Annotation( "BIRNLEX:2691") "lateral amygdaloid nucleus, ventromedial part") AnnotationAssertion(Annotation( "BIRNLEX:2691") Annotation( ) "lateral amygdaloid nucleus, ventromedial part") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0023417") AnnotationAssertion(rdfs:label "lateral amygdaloid nucleus, ventromedial part") SubClassOf( ) # Class: (superficial feature part of forebrain) AnnotationAssertion( "BIRNLEX:4005") AnnotationAssertion(Annotation( "BIRNLEX:4005") "superficial feature part of forebrain") AnnotationAssertion(Annotation( "BIRNLEX:4005") Annotation( ) "superficial feature part of forebrain") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0023443") AnnotationAssertion(rdfs:label "superficial feature part of forebrain") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (superficial feature part of occipital lobe) AnnotationAssertion( "BIRNLEX:4024") AnnotationAssertion(Annotation( "BIRNLEX:4024") "superficial feature part of occipital lobe") AnnotationAssertion(Annotation( "BIRNLEX:4024") Annotation( ) "superficial feature part of occipital lobe") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0023462") AnnotationAssertion(rdfs:label "superficial feature part of occipital lobe") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete regional part of tongue) AnnotationAssertion( "BIRNLEX:4098") AnnotationAssertion(Annotation( "BIRNLEX:4098") "regional part of tongue") AnnotationAssertion(Annotation( "BIRNLEX:4098") Annotation( ) "regional part of tongue") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0023536") AnnotationAssertion(rdfs:label "obsolete regional part of tongue") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (conical papilla) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:4103") AnnotationAssertion(Annotation( "BIRNLEX:4103") "conical papilla") AnnotationAssertion(Annotation( "BIRNLEX:4103") Annotation( ) "conical papilla") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0023541") AnnotationAssertion(rdfs:label "conical papilla") SubClassOf(Annotation( "NIFSTD"^^xsd:string) ) # Class: (obsolete regional part of stratum pyramidale hippocampi) AnnotationAssertion( "BIRNLEX:4109") AnnotationAssertion(Annotation( "BIRNLEX:4109") "regional part of stratum pyramidale hippocampi") AnnotationAssertion(Annotation( "BIRNLEX:4109") Annotation( ) "regional part of stratum pyramidale hippocampi") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0023547") AnnotationAssertion(rdfs:label "obsolete regional part of stratum pyramidale hippocampi") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete regional part of stratum oriens) AnnotationAssertion( "BIRNLEX:4114") AnnotationAssertion(Annotation( "BIRNLEX:4114") "regional part of stratum oriens") AnnotationAssertion(Annotation( "BIRNLEX:4114") Annotation( ) "regional part of stratum oriens") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0023552") AnnotationAssertion(rdfs:label "obsolete regional part of stratum oriens") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete regional part of stratum radiatum) AnnotationAssertion( "BIRNLEX:4118") AnnotationAssertion(Annotation( "BIRNLEX:4118") "regional part of stratum radiatum") AnnotationAssertion(Annotation( "BIRNLEX:4118") Annotation( ) "regional part of stratum radiatum") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0023556") AnnotationAssertion(rdfs:label "obsolete regional part of stratum radiatum") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete regional part of stratum lacunosum moleculare) AnnotationAssertion( "BIRNLEX:4122") AnnotationAssertion(Annotation( "BIRNLEX:4122") "regional part of stratum lacunosum moleculare") AnnotationAssertion(Annotation( "BIRNLEX:4122") Annotation( ) "regional part of stratum lacunosum moleculare") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0023560") AnnotationAssertion(rdfs:label "obsolete regional part of stratum lacunosum moleculare") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (cytoarchitectural part of dentate gyrus) AnnotationAssertion( "BIRNLEX:4126") AnnotationAssertion(Annotation( "BIRNLEX:4126") "cytoarchitectural part of dentate gyrus") AnnotationAssertion(Annotation( "BIRNLEX:4126") Annotation( ) "cytoarchitectural part of dentate gyrus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0023564") AnnotationAssertion(rdfs:label "cytoarchitectural part of dentate gyrus") SubClassOf( ) # Class: (obsolete regional part of basal nuclear complex) AnnotationAssertion( "BIRNLEX:702") AnnotationAssertion(Annotation( "BIRNLEX:702") "regional part of basal nuclear complex") AnnotationAssertion(Annotation( "BIRNLEX:702") Annotation( ) "regional part of basal nuclear complex") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0023572") AnnotationAssertion(rdfs:label "obsolete regional part of basal nuclear complex") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete predominantly gray regional part of inferior colliculus) AnnotationAssertion( "BIRNLEX:718") AnnotationAssertion(Annotation( "BIRNLEX:718") Annotation( ) "predominantly gray regional part of inferior colliculus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0023587") AnnotationAssertion(rdfs:label "obsolete predominantly gray regional part of inferior colliculus") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (ventral nerve root of sacral spinal cord) AnnotationAssertion( "BIRNLEX:755") AnnotationAssertion(Annotation( "BIRNLEX:755") Annotation( ) "ventral nerve root of sacral spinal cord") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BIRNLEX:755") "anterior nerve root of sacral spinal cord") AnnotationAssertion( "UBERON:0023623") AnnotationAssertion(rdfs:label "ventral nerve root of sacral spinal cord") SubClassOf(Annotation( "NIFSTD"^^xsd:string) ) DisjointClasses(Annotation( "NIFSTD"^^xsd:string) ) # Class: (obsolete regional part of anterior hypothalamic region) AnnotationAssertion( "BIRNLEX:761") AnnotationAssertion(Annotation( "BIRNLEX:761") "regional part of anterior hypothalamic region") AnnotationAssertion(Annotation( "BIRNLEX:761") Annotation( ) "regional part of anterior hypothalamic region") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0023628") AnnotationAssertion(rdfs:label "obsolete regional part of anterior hypothalamic region") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete regional part of pons) AnnotationAssertion( "BIRNLEX:771") AnnotationAssertion(Annotation( "BIRNLEX:771") "regional part of pons") AnnotationAssertion(Annotation( "BIRNLEX:771") Annotation( ) "regional part of pons") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0023636") AnnotationAssertion(rdfs:label "obsolete regional part of pons") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete regional part of granular layer of cerebellar cortex) AnnotationAssertion( "BIRNLEX:784") AnnotationAssertion(Annotation( "BIRNLEX:784") "regional part of granular layer of cerebellar cortex") AnnotationAssertion(Annotation( "BIRNLEX:784") Annotation( ) "regional part of granular layer of cerebellar cortex") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0023648") AnnotationAssertion(rdfs:label "obsolete regional part of granular layer of cerebellar cortex") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete predominantly white regional part of hypothalamus) AnnotationAssertion( "BIRNLEX:785") AnnotationAssertion(Annotation( "BIRNLEX:785") "predominantly white regional part of hypothalamus") AnnotationAssertion(Annotation( "BIRNLEX:785") Annotation( ) "predominantly white regional part of hypothalamus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0023649") AnnotationAssertion(rdfs:label "obsolete predominantly white regional part of hypothalamus") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete predominantly white regional part of tectum) AnnotationAssertion( "BIRNLEX:808") AnnotationAssertion(Annotation( "BIRNLEX:808") "predominantly white regional part of tectum") AnnotationAssertion(Annotation( "BIRNLEX:808") Annotation( ) "predominantly white regional part of tectum") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0023670") AnnotationAssertion(rdfs:label "obsolete predominantly white regional part of tectum") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete predominantly gray regional part of tectum) AnnotationAssertion( "BIRNLEX:815") AnnotationAssertion(Annotation( "BIRNLEX:815") "predominantly gray regional part of tectum") AnnotationAssertion(Annotation( "BIRNLEX:815") Annotation( ) "predominantly gray regional part of tectum") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0023677") AnnotationAssertion(rdfs:label "obsolete predominantly gray regional part of tectum") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete regional part of septal nuclear complex) AnnotationAssertion( "BIRNLEX:825") AnnotationAssertion(Annotation( "BIRNLEX:825") "regional part of septal nuclear complex") AnnotationAssertion(Annotation( "BIRNLEX:825") Annotation( ) "regional part of septal nuclear complex") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0023687") AnnotationAssertion(rdfs:label "obsolete regional part of septal nuclear complex") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete superficial feature part of telencephalon) AnnotationAssertion( "BIRNLEX:833") AnnotationAssertion(Annotation( "BIRNLEX:833") "superficial feature part of telencephalon") AnnotationAssertion(Annotation( "BIRNLEX:833") Annotation( ) "superficial feature part of telencephalon") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0023695") AnnotationAssertion(rdfs:label "obsolete superficial feature part of telencephalon") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete regional part of fornix) AnnotationAssertion( "BIRNLEX:842") AnnotationAssertion(Annotation( "BIRNLEX:842") "regional part of fornix") AnnotationAssertion(Annotation( "BIRNLEX:842") Annotation( ) "regional part of fornix") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0023703") AnnotationAssertion(rdfs:label "obsolete regional part of fornix") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (habenulo-interpeduncular tract of midbrain) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:895") AnnotationAssertion(Annotation( "BIRNLEX:895") "habenulo-interpeduncular tract of midbrain") AnnotationAssertion(Annotation( "BIRNLEX:895") Annotation( ) "habenulo-interpeduncular tract of midbrain") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0023740") AnnotationAssertion(rdfs:label "habenulo-interpeduncular tract of midbrain") SubClassOf( ) SubClassOf(Annotation( "NIFSTD"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (intermediate part of hypophysis) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:906") AnnotationAssertion(Annotation( "BIRNLEX:906") "intermediate part of hypophysis") AnnotationAssertion(Annotation( "BIRNLEX:906") Annotation( ) "intermediate part of hypophysis") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BIRNLEX:906") "intermediate lobe of hypophysis") AnnotationAssertion(Annotation( "BIRNLEX:906") "intermediate region of hypophysis") AnnotationAssertion(Annotation( "BIRNLEX:906") "middle lobe of hypophysis") AnnotationAssertion(Annotation( "BIRNLEX:906") "pituitary gland, intermediate lobe") AnnotationAssertion( "UBERON:0023752") AnnotationAssertion(rdfs:label "intermediate part of hypophysis") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "NIFSTD"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (obsolete gross anatomical part of cerebral cortex) AnnotationAssertion( "BIRNLEX:940") AnnotationAssertion(Annotation( "BIRNLEX:940") "gross anatomical part of cerebral cortex") AnnotationAssertion(Annotation( "BIRNLEX:940") Annotation( ) "gross anatomical part of cerebral cortex") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0023783") AnnotationAssertion(rdfs:label "obsolete gross anatomical part of cerebral cortex") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (subicular complex) AnnotationAssertion(Annotation( "BIRNLEX:944") "A composite structure of the temporal lobe that includes the subiculum, the presubiculum and the parasubicular area (Amaral-90).") AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:944") AnnotationAssertion( "FMA:275157") AnnotationAssertion(Annotation( "BIRNLEX:944") "subicular complex") AnnotationAssertion(Annotation( "BIRNLEX:944") Annotation( ) "subicular complex") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0023787") AnnotationAssertion(rdfs:label "subicular complex") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "NIFSTD"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (obsolete regional part of limbic lobe) AnnotationAssertion( "BIRNLEX:947") AnnotationAssertion(Annotation( "BIRNLEX:947") "regional part of limbic lobe") AnnotationAssertion(Annotation( "BIRNLEX:947") Annotation( ) "regional part of limbic lobe") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0023789") AnnotationAssertion(rdfs:label "obsolete regional part of limbic lobe") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete regional part of hindbrain) AnnotationAssertion( "BIRNLEX:949") AnnotationAssertion(Annotation( "BIRNLEX:949") "regional part of hindbrain") AnnotationAssertion(Annotation( "BIRNLEX:949") Annotation( ) "regional part of hindbrain") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0023791") AnnotationAssertion(rdfs:label "obsolete regional part of hindbrain") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete regional part of thoracic spinal cord) AnnotationAssertion( "BIRNLEX:972") AnnotationAssertion(Annotation( "BIRNLEX:972") "regional part of thoracic spinal cord") AnnotationAssertion(Annotation( "BIRNLEX:972") Annotation( ) "regional part of thoracic spinal cord") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0023812") AnnotationAssertion(rdfs:label "obsolete regional part of thoracic spinal cord") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete regional part of frontal lobe) AnnotationAssertion( "BIRNLEX:984") AnnotationAssertion(Annotation( "BIRNLEX:984") "regional part of frontal lobe") AnnotationAssertion(Annotation( "BIRNLEX:984") Annotation( ) "regional part of frontal lobe") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0023824") AnnotationAssertion(rdfs:label "obsolete regional part of frontal lobe") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete predominantly white regional part of inferior colliculus) AnnotationAssertion( "BIRNLEX:985") AnnotationAssertion(Annotation( "BIRNLEX:985") "predominantly white regional part of inferior colliculus") AnnotationAssertion(Annotation( "BIRNLEX:985") Annotation( ) "predominantly white regional part of inferior colliculus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0023825") AnnotationAssertion(rdfs:label "obsolete predominantly white regional part of inferior colliculus") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete cytoarchitectural part of the cerebellum) AnnotationAssertion( "BIRNLEX:987") AnnotationAssertion(Annotation( "BIRNLEX:987") "cytoarchitectural part of the cerebellum") AnnotationAssertion(Annotation( "BIRNLEX:987") Annotation( ) "cytoarchitectural part of the cerebellum") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0023827") AnnotationAssertion(rdfs:label "obsolete cytoarchitectural part of the cerebellum") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (gross anatomical parts of the cerebellum) AnnotationAssertion( "BIRNLEX:996") AnnotationAssertion(Annotation( "BIRNLEX:996") "gross anatomical parts of the cerebellum") AnnotationAssertion(Annotation( "BIRNLEX:996") Annotation( ) "gross anatomical parts of the cerebellum") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0023836") AnnotationAssertion(rdfs:label "gross anatomical parts of the cerebellum") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (temporoparietal junction) AnnotationAssertion(Annotation( "NLX:144255") "An area of the brain that locates at the interception of temporal and parietal cortices (at the posterior end of the Sylvian fissure).") AnnotationAssertion( "NLX:144255") AnnotationAssertion(Annotation( "NLX:144255") "temporoparietal junction") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0023852") AnnotationAssertion(rdfs:label "temporoparietal junction") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "NIFSTD"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (commissural nucleus of the solitary tract) AnnotationAssertion( "NLX:144259") AnnotationAssertion(Annotation( "NLX:144259") "commissural nucleus of the solitary tract") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NLX:144259") "commissural nucleus tractus solitarius") AnnotationAssertion( "UBERON:0023855") AnnotationAssertion(rdfs:label "commissural nucleus of the solitary tract") SubClassOf( ) # Class: (primary somatosensory cortex layer 6) AnnotationAssertion( "NLX:144265") AnnotationAssertion(Annotation( "NLX:144265") "primary somatosensory cortex lamina VI") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NLX:144265") "primary somatosensory cortex lamina VI") AnnotationAssertion( "UBERON:0023859") AnnotationAssertion(rdfs:label "primary somatosensory cortex layer 6") SubClassOf( ) SubClassOf(Annotation( "NIFSTD"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (planum polare) AnnotationAssertion(Annotation( "NLX:144291") "A portion of the superior temporal gyrus near the temporal pole in the human.") AnnotationAssertion( ) AnnotationAssertion( "HBA:4177") AnnotationAssertion( "NLX:144291") AnnotationAssertion(Annotation( "NLX:144291") "planum polare") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0023861") AnnotationAssertion(rdfs:label "planum polare") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "NIFSTD"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (hippocampal formation of GP94) AnnotationAssertion(Annotation( "NLX:144306") "The combined region of AmmonÕs horn, subicular complex and dentate gyrus; only fields CA1-CA3 of the hippocampus were considered to be part of the HF, field CA4 being included in the hilus of the dentate gyrus[1].") AnnotationAssertion( "NLX:144306") AnnotationAssertion(Annotation( "NLX:144306") "hippocampal formation of gp94") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0023862") AnnotationAssertion(rdfs:label "hippocampal formation of GP94") SubClassOf( ) # Class: (medial ventral tegmental area) AnnotationAssertion( "NLX:22533") AnnotationAssertion(Annotation( "NLX:22533") "medial ventral tegmental area") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0023865") AnnotationAssertion(rdfs:label "medial ventral tegmental area") SubClassOf( ) SubClassOf(Annotation( "NIFSTD"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (isla magna of Calleja) AnnotationAssertion(Annotation( "NLX:55138") "Regional part of telencephalon; the most prominent of the islands of Calleja located medially in the nucleus accumbens (adapted from Braininfo.org).") AnnotationAssertion( ) AnnotationAssertion( "DHBA:10359") AnnotationAssertion( "MBA:489") AnnotationAssertion( "NLX:55138") AnnotationAssertion(Annotation( "NLX:55138") "isla magna of calleja") AnnotationAssertion(Annotation( "DHBA:10359") "major island of Calleja") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NLX:55138") "insula magna") AnnotationAssertion(Annotation( "NLX:55138") "large island of calleja") AnnotationAssertion( "UBERON:0023868") AnnotationAssertion(rdfs:label "isla magna of Calleja") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "NIFSTD"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (obsolete body membrane) AnnotationAssertion(Annotation( "NLXANAT:090201") "Part of body that takes the form of a thin sheet of cells or fibrous material, e.g., the meningeal coverings of the brain[NIFSTD].") AnnotationAssertion( "NLXANAT:090201") AnnotationAssertion( "UBERON:0000158") AnnotationAssertion(Annotation( "NLXANAT:090201") "body membrane") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0023869") AnnotationAssertion(rdfs:comment "This term was inherited from the migration of NIFSTD-Anatomy to Uberon. Upon consideration the same concept is better represented by existing classes in Uberon such as \"membrnous organ\". The following comment was inherited from http://uri.neuinfo.org/nif/nifstd/ Not sure this is the correct designation; FMA has \"membranous organ\" but that doesn't seem quite right either.") AnnotationAssertion(rdfs:label "obsolete body membrane") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (neural system) AnnotationAssertion(Annotation( "NLXANAT:090802") "A set of neural structures that subserve a specific function, e.g., visual system.") AnnotationAssertion( "this class was inherited from NIFSTD as part of the replacement of NIFSTD with Uberon. It may be obsoleted in the future") AnnotationAssertion( "NLXANAT:090802") AnnotationAssertion(Annotation( "NLXANAT:090802") "neural system") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0023879") AnnotationAssertion(rdfs:label "neural system") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (piriform cortex layer 1a) AnnotationAssertion(Annotation( "NLXANAT:091004") "Superficial part of plexiform layer (layer 1) of piriform cortex that receives afferents from the olfactory bulb by way of the lateral olfactory tract.") AnnotationAssertion( "NLXANAT:091004") AnnotationAssertion(Annotation( "NLXANAT:091004") "piriform cortex layer 1a") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0023900") AnnotationAssertion(rdfs:label "piriform cortex layer 1a") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "NIFSTD"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (piriform cortex layer 1b) AnnotationAssertion(Annotation( "NLXANAT:091005") "Deeper part of the plexiform (layer 1) of piriform cortex characterized by projection of association fibers from other parts of the piriform cortex and other olfactory areas.") AnnotationAssertion( "NLXANAT:091005") AnnotationAssertion(Annotation( "NLXANAT:091005") "piriform cortex layer 1b") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0023901") AnnotationAssertion(rdfs:label "piriform cortex layer 1b") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "NIFSTD"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (obsolete regional part of nose) AnnotationAssertion( "NLXANAT:100305") AnnotationAssertion(Annotation( "NLXANAT:100305") "regional part of nose") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0023915") AnnotationAssertion(rdfs:label "obsolete regional part of nose") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (basal ganglia of rodent) AnnotationAssertion(Annotation( "NLXANAT:100311") "The basal ganglia of the rodent.") AnnotationAssertion( "NLXANAT:100311") AnnotationAssertion(Annotation( "NLXANAT:100311") "basal ganglia of rodent") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NLXANAT:100311") "rodent basal ganglia") AnnotationAssertion( "UBERON:0023920") AnnotationAssertion(rdfs:label "basal ganglia of rodent") SubClassOf(Annotation( "NIFSTD"^^xsd:string) ) # Class: (subbrachial nucleus of mouse of Franklin and Paxinos 2008) AnnotationAssertion( "NLXANAT:1005004") AnnotationAssertion(Annotation( "NLXANAT:1005004") "subbrachial nucleus of mouse of franklin and paxinos 2008") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0023927") AnnotationAssertion(rdfs:label "subbrachial nucleus of mouse of Franklin and Paxinos 2008") SubClassOf(Annotation( "NIFSTD"^^xsd:string) ) # Class: (postrhinal cortex of rodent of Burwell et al 1995) AnnotationAssertion(Annotation( "NLXANAT:1005005") "Cortical region lying caudal to the perirhinal cortex in the rat. It encompasses the caudal levels of area 35 and the caudal portion of area 36 (ectorhinal cortex). It is bordered medially by agranular retrosplenial cortex and ventrally by the entorhinal cortex (with the exception of the caudomedial portion). The authors note that the ventral portion of the postrhinal cortex in rat may by homologous with the parahippocampal cortex in the monkey.") AnnotationAssertion( "NLXANAT:1005005") AnnotationAssertion(Annotation( "NLXANAT:1005005") "postrhinal cortex of rodent of burwell et al 1995") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NLXANAT:1005005") "postrhinal cortex") AnnotationAssertion(Annotation( "NLXANAT:1005005") "postrhinal cortex of rodent") AnnotationAssertion(Annotation( "NLXANAT:1005005") "rodent postrhinal cortex") AnnotationAssertion( "UBERON:0023928") AnnotationAssertion(rdfs:label "postrhinal cortex of rodent of Burwell et al 1995") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (Sommer's sector) AnnotationAssertion(Annotation( "NLXANAT:1005009") "Part of hippocampal formation comprising area CA1 and the subiculum (pg 425, Heimer, L. The human brain and spinal cord, Springer-Verlag, 1995).") AnnotationAssertion( "NLXANAT:1005009") AnnotationAssertion(Annotation( "NLXANAT:1005009") "sommer's sector") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NLXANAT:1005009") "sommers sector") AnnotationAssertion( "UBERON:0023932") AnnotationAssertion(rdfs:label "Sommer's sector") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (olfactory bulb main glomerular layer) AnnotationAssertion(Annotation( "NLXANAT:1005011") "The glomerular layer of the main olfactory bulb, lying deep to the olfactory nerve layer. It contains the glomeruli, neuropil rich spheroid structures surrounded by a distinctive shell of small neuros and glial cells (Paxinos, the Rat Nervous System, 2nd ed., Academic Press, 1995).") AnnotationAssertion( "NLXANAT:1005011") AnnotationAssertion(Annotation( "NLXANAT:1005011") "olfactory bulb main glomerular layer") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0023934") AnnotationAssertion(rdfs:label "olfactory bulb main glomerular layer") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete telencephalon of primate) AnnotationAssertion(Annotation( "NLXANAT:1005012") "The telencephalon of the primate.") AnnotationAssertion( "NLXANAT:1005012") AnnotationAssertion(Annotation( "NLXANAT:1005012") "telencephalon of primate") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NLXANAT:1005012") "primate telencephalon") AnnotationAssertion( "UBERON:0023935") AnnotationAssertion(rdfs:label "obsolete telencephalon of primate") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (perirhinal cortex of Burwell et al 1995) AnnotationAssertion(Annotation( "NLXANAT:1005013") "Rostral portion of the parahippocampal cortex.") AnnotationAssertion( "NLXANAT:1005013") AnnotationAssertion(Annotation( "NLXANAT:1005013") "perirhinal cortex of burwell et al 1995") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NLXANAT:1005013") "perirhinal cortex") AnnotationAssertion( "UBERON:0023936") AnnotationAssertion(rdfs:label "perirhinal cortex of Burwell et al 1995") SubClassOf(Annotation( "NIFSTD"^^xsd:string) ) # Class: (obsolete telencephalon of rodent) AnnotationAssertion(Annotation( "NLXANAT:1005015") "The telencephalon of a rodent.") AnnotationAssertion( "NLXANAT:1005015") AnnotationAssertion( "UBERON:0001893") AnnotationAssertion(Annotation( "NLXANAT:1005015") "telencephalon of rodent") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NLXANAT:1005015") "rodent telencephalon") AnnotationAssertion( "UBERON:0023938") AnnotationAssertion(rdfs:comment "Made obsolete as we do not add taxon-specific classes, consider using a combination of the uberon class and NCBITaxon class") AnnotationAssertion(rdfs:label "obsolete telencephalon of rodent") AnnotationAssertion(rdfs:seeAlso "NCBITaxon:9989") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete brain of rodent) AnnotationAssertion(Annotation( "NLXANAT:1005016") "The brain of a rodent.") AnnotationAssertion( "NLXANAT:1005016") AnnotationAssertion( "UBERON:0000955") AnnotationAssertion(Annotation( "NLXANAT:1005016") "brain of rodent") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NLXANAT:1005016") "rodent brain") AnnotationAssertion( "UBERON:0023939") AnnotationAssertion(rdfs:comment "Made obsolete as we do not add taxon-specific classes, consider using a combination of the uberon class and NCBITaxon class") AnnotationAssertion(rdfs:label "obsolete brain of rodent") AnnotationAssertion(rdfs:seeAlso "NCBITaxon:9989") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete olfactory bulb main of rodent) AnnotationAssertion( "NLXANAT:1005019") AnnotationAssertion( "UBERON:0009951") AnnotationAssertion(Annotation( "NLXANAT:1005019") "olfactory bulb main of rodent") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0023942") AnnotationAssertion(rdfs:comment "Made obsolete as we do not add taxon-specific classes, consider using a combination of the uberon class and NCBITaxon class") AnnotationAssertion(rdfs:label "obsolete olfactory bulb main of rodent") AnnotationAssertion(rdfs:seeAlso "NCBITaxon:9989") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (molecular system) AnnotationAssertion( "this class was inherited from NIFSTD as part of the replacement of NIFSTD with Uberon. It may be obsoleted in the future") AnnotationAssertion( "NLXANAT:1005020") AnnotationAssertion(Annotation( "NLXANAT:1005020") "molecular system") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0023943") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "molecular system") SubClassOf(Annotation( "NIFSTD"^^xsd:string) ) # Class: (bed nuclei of the stria terminalis oval nucleus) AnnotationAssertion(Annotation( "NLXANAT:1005035") "Part of bed nucleus of stria terminalis, comprising a distinct, large, egg-shaped collection of neurons that, together with the juxtacapsular (Ju) and rhomboid (Rh) nuclei, encompass the anterolateral area of the BST (Ju and Swanson, 1989).") AnnotationAssertion( "NLXANAT:1005035") AnnotationAssertion(Annotation( "NLXANAT:1005035") "bed nuclei of the stria terminalis oval nucleus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0023958") AnnotationAssertion(rdfs:label "bed nuclei of the stria terminalis oval nucleus") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "NIFSTD"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (central cervical spinocerebellar tract) AnnotationAssertion(Annotation( "NLXANAT:1010018") "Central cervical spinocerebellar tract.") AnnotationAssertion( "NLXANAT:1010018") AnnotationAssertion(Annotation( "NLXANAT:1010018") "central cervical spinocerebellar tract") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0023983") AnnotationAssertion(rdfs:label "central cervical spinocerebellar tract") SubClassOf( ) SubClassOf(Annotation( "NIFSTD"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (rostral spinocerebellar tract) AnnotationAssertion(Annotation( "NLXANAT:1010019") "Originates from cells rostral to Clarke's column and sends uncrossed axons through the lateral funiculus to the cerebellum. It reaches the cerebellum partly through the brachium conjunctivum and partly through the restiform body, terminating bilaterally in the anterior lobe of the cerebellum.") AnnotationAssertion( "NLXANAT:1010019") AnnotationAssertion(Annotation( "NLXANAT:1010019") "rostral spinocerebellar tract") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0023984") AnnotationAssertion(rdfs:label "rostral spinocerebellar tract") SubClassOf( ) SubClassOf(Annotation( "NIFSTD"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (cerebellum hemispheric lobule II) AnnotationAssertion( "FMA:278665") AnnotationAssertion( "NLXANAT:20081202") AnnotationAssertion(Annotation( "NLXANAT:20081202") "hemispheric lobule ii") AnnotationAssertion(Annotation( "FMA:278665") "lobule H II of Larsell") AnnotationAssertion(Annotation( "FMA:278665") "lobule II of cerebellar hemisphere") AnnotationAssertion(Annotation( "FMA:278665") "lobule II of hemisphere of cerebellum") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NLXANAT:20081202") "alar central lobule") AnnotationAssertion(Annotation( "NLXANAT:20081202") "central lobule (hII)") AnnotationAssertion( "UBERON:0023998") AnnotationAssertion(rdfs:label "cerebellum hemispheric lobule II") SubClassOf(Annotation( "NIFSTD"^^xsd:string) ) SubClassOf( ) # Class: (cerebellum hemispheric lobule III) AnnotationAssertion( "FMA:278672") AnnotationAssertion( "NLXANAT:20081203") AnnotationAssertion(Annotation( "NLXANAT:20081203") "hemispheric lobule III") AnnotationAssertion(Annotation( "FMA:278672") "lobule H III of Larsell") AnnotationAssertion(Annotation( "FMA:278672") "lobule III of cerbellar hemisphere") AnnotationAssertion(Annotation( "FMA:278672") "lobule III of hemisphere of cerebellum") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NLXANAT:20081203") "alar central lobule") AnnotationAssertion(Annotation( "NLXANAT:20081203") "central lobule (hIII)") AnnotationAssertion( "UBERON:0023999") AnnotationAssertion(rdfs:label "cerebellum hemispheric lobule III") SubClassOf(Annotation( "NIFSTD"^^xsd:string) ) SubClassOf( ) # Class: (cerebellum hemispheric lobule IV) AnnotationAssertion( "FMA:272300") AnnotationAssertion( "FMA:278683") AnnotationAssertion( "NLXANAT:20081204") AnnotationAssertion(Annotation( "NLXANAT:20081204") "hemispheric lobule IV") AnnotationAssertion(Annotation( "FMA:278683") "lobule H IV of Larsell") AnnotationAssertion(Annotation( "FMA:278683") "lobule IV of cerebellar hemisphere") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NLXANAT:20081204") "anterior quadrangular lobule") AnnotationAssertion(Annotation( "NLXANAT:20081204") "culmen lobule (hIV)") AnnotationAssertion(Annotation( "NLXANAT:20081204") "lobulus anterior") AnnotationAssertion(Annotation( "NLXANAT:20081204") "lobulus quadrangularis anterior") AnnotationAssertion(Annotation( "NLXANAT:20081204") "quadrangular lobule") AnnotationAssertion( "UBERON:0024000") AnnotationAssertion(rdfs:label "cerebellum hemispheric lobule IV") SubClassOf(Annotation( "NIFSTD"^^xsd:string) ) SubClassOf( ) # Class: (cerebellum hemispheric lobule V) AnnotationAssertion( "FMA:278723") AnnotationAssertion( "NLXANAT:20081205") AnnotationAssertion(Annotation( "NLXANAT:20081205") "hemispheric lobule V") AnnotationAssertion(Annotation( "FMA:278723") "lobule H V of Larsell") AnnotationAssertion(Annotation( "FMA:278723") "lobule V of cerebellar hemisphere") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NLXANAT:20081205") "anterior quadrangular lobule") AnnotationAssertion(Annotation( "NLXANAT:20081205") "culmen lobule (hV)") AnnotationAssertion(Annotation( "NLXANAT:20081205") "lobulus anterior") AnnotationAssertion(Annotation( "NLXANAT:20081205") "lobulus quadrangularis anterior") AnnotationAssertion(Annotation( "NLXANAT:20081205") "quadrangular lobule") AnnotationAssertion( "UBERON:0024001") AnnotationAssertion(rdfs:label "cerebellum hemispheric lobule V") SubClassOf(Annotation( "NIFSTD"^^xsd:string) ) SubClassOf( ) # Class: (cerebellum hemispheric lobule VII) AnnotationAssertion( "NLXANAT:20081207") AnnotationAssertion(Annotation( "NLXANAT:20081207") "hemispheric lobule VII") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0024003") AnnotationAssertion(rdfs:label "cerebellum hemispheric lobule VII") SubClassOf(Annotation( "NIFSTD"^^xsd:string) ) # Class: (cerebellum hemispheric lobule X) AnnotationAssertion( "NLXANAT:20081213") AnnotationAssertion(Annotation( "NLXANAT:20081213") "hemispheric lobule X") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NLXANAT:20081213") "flocculus") AnnotationAssertion( "UBERON:0024009") AnnotationAssertion(rdfs:label "cerebellum hemispheric lobule X") SubClassOf(Annotation( "NIFSTD"^^xsd:string) ) SubClassOf( ) # Class: (vermis of the flocculonodular lobe of the cerebellum) AnnotationAssertion( "NLXANAT:20081241") AnnotationAssertion(Annotation( "UBERON:cjm"^^xsd:string) "flocculonodular vermis") AnnotationAssertion(Annotation( "NLXANAT:20081241") "vermis of the flocculonodular lobe of the cerebellum") AnnotationAssertion(Annotation( "NLXANAT:20081241") Annotation( ) "vermis of the flocculonodular lobe of the cerebellum") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0024037") AnnotationAssertion(rdfs:label "vermis of the flocculonodular lobe of the cerebellum") SubClassOf(Annotation( "NIFSTD"^^xsd:string) ) # Class: (rostral portion of the medial accessory olive) AnnotationAssertion( "NLXANAT:20081247") AnnotationAssertion(Annotation( "NLXANAT:20081247") "rostral portion of the medial accessory olive") AnnotationAssertion(Annotation( "NLXANAT:20081247") Annotation( ) "rostral portion of the medial accessory olive") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0024043") AnnotationAssertion(rdfs:label "rostral portion of the medial accessory olive") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "NIFSTD"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (white matter of the cerebellar cortex) AnnotationAssertion(Annotation( "NLXANAT:20081249") "White matter that lies deep to the granular cell layer of the cerebellar cortex. It contains afferents to the cerebellar cortex and axons that run between the cerebellar cortex and the deep cerebellar nuclei.") AnnotationAssertion( "NLXANAT:20081249") AnnotationAssertion(Annotation( "NLXANAT:20081249") "white matter of the cerebellar cortex") AnnotationAssertion(Annotation( "NLXANAT:20081249") Annotation( ) "white matter of the cerebellar cortex") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0024045") AnnotationAssertion(rdfs:label "white matter of the cerebellar cortex") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (superficial feature part of the cerebellum) AnnotationAssertion( "NLXANAT:20081250") AnnotationAssertion(Annotation( "NLXANAT:20081250") "superficial feature part of the cerebellum") AnnotationAssertion(Annotation( "NLXANAT:20081250") Annotation( ) "superficial feature part of the cerebellum") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0024046") AnnotationAssertion(rdfs:label "superficial feature part of the cerebellum") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete regional part of spinal nerve) AnnotationAssertion( "NLXANAT:20090206") AnnotationAssertion(Annotation( "NLXANAT:20090206") "regional part of spinal nerve") AnnotationAssertion(Annotation( "NLXANAT:20090206") Annotation( ) "regional part of spinal nerve") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0024065") AnnotationAssertion(rdfs:label "obsolete regional part of spinal nerve") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete regional part of nucleus accumbens) AnnotationAssertion( "NLXANAT:20090305") AnnotationAssertion(Annotation( "NLXANAT:20090305") "regional part of nucleus accumbens") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0024073") AnnotationAssertion(rdfs:label "obsolete regional part of nucleus accumbens") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (principal anterior division of supraoptic nucleus) AnnotationAssertion(Annotation( "NLXANAT:20090310") "One of two divisions of the supraoptic nucleus observed in mammals, formed by the ascension of the optic chiasm to split the nucleus in two. The principal anterior division consists of a dense cluster of large cells that stain darkly in Nissl preparations adjacent to the optic chiasm, extending as far rostrally to the organum vasculosum of the lamina terminalis and caudally into the posterior hypothalamus.") AnnotationAssertion( "NLXANAT:20090310") AnnotationAssertion(Annotation( "NLXANAT:20090310") "principal anterior division of supraoptic nucleus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0024078") AnnotationAssertion(rdfs:label "principal anterior division of supraoptic nucleus") SubClassOf( ) # Class: (tuberal supraoptic nucleus) AnnotationAssertion(Annotation( "NLXANAT:20090311") "Posterior division of the supraoptic nucleus, formed by the ascension of the optic tract splitting the nucleus into two regions. The tuberal SON lies along the posterior tuber cinereum of the hypothalamus. In some species, some neurons lie under the optic chiasm.") AnnotationAssertion( "NLXANAT:20090311") AnnotationAssertion(Annotation( "NLXANAT:20090311") "tuberal supraoptic nucleus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NLXANAT:20090311") "retrochiasmatic subdivision") AnnotationAssertion( "UBERON:0024079") AnnotationAssertion(rdfs:label "tuberal supraoptic nucleus") SubClassOf( ) SubClassOf(Annotation( "NIFSTD"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (obsolete regional part of stratum lucidum) AnnotationAssertion( "NLXANAT:20090401") AnnotationAssertion(Annotation( "NLXANAT:20090401") "regional part of stratum lucidum") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0024081") AnnotationAssertion(rdfs:label "obsolete regional part of stratum lucidum") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete cytoarchitectural part of dorsal tegmental nucleus) AnnotationAssertion( "NLXANAT:20090406") AnnotationAssertion(Annotation( "NLXANAT:20090406") "cytoarchitectural part of dorsal tegmental nucleus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0024086") AnnotationAssertion(rdfs:label "obsolete cytoarchitectural part of dorsal tegmental nucleus") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (chemoarchitectural part of brain) AnnotationAssertion(Annotation( "NLXANAT:20090501") "Regional part of an anatomical region that is revealed by the use of a stain that reveals chemoarchitecture.") AnnotationAssertion( "NLXANAT:20090501") AnnotationAssertion(Annotation( "NLXANAT:20090501") "chemoarchitectural part") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0024090") AnnotationAssertion(rdfs:label "chemoarchitectural part of brain") SubClassOf( ) # Class: (basis pontis) AnnotationAssertion(Annotation( ) "The basis pontis is the anterior portion of the pons.") AnnotationAssertion( ) AnnotationAssertion( "NLXANAT:20090704") AnnotationAssertion(Annotation( "NLXANAT:20090704") Annotation( ) "basis pontis") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0024110") AnnotationAssertion(rdfs:label "basis pontis") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "NIFSTD"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (obsolete regional part of adenohypophysis) AnnotationAssertion( "BIRNLEX:1004") AnnotationAssertion(Annotation( "BIRNLEX:1004") "regional part of adenohypophysis") AnnotationAssertion(Annotation( "BIRNLEX:1004") Annotation( ) "regional part of adenohypophysis") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0024125") AnnotationAssertion(rdfs:label "obsolete regional part of adenohypophysis") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (tegmentum) AnnotationAssertion(Annotation( "BIRNLEX:1031") "The ventral topographic division of the midbrain; the dorsal topographic division is the tectum. Meckel (1817; see English translation, 1832, vol. 2, p. 467) apparently introduced the term and roughly its definition here for macrodissected adult humans, except he excluded the cerebral peduncle (Tarin, 1753), a white matter tract at the base of the midbrain, which is still common today but is included here. As defined here, tegmentum refers to the whole of the midbrain (Baer, 1837) excluding the tectum but including the pretectal region (Scalia, 1972); see Swanson (2000, pp. 522, 526). Usage of this term is very complex, inconsistent, and illogical; see for example Crosby et al. (1962, pp. 221, 260, 262), Carpenter (1976, p. 367 ff.).") AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:1031") AnnotationAssertion(Annotation( "BIRNLEX:1031") "tegmentum") AnnotationAssertion(Annotation( "BIRNLEX:1031") Annotation( ) "tegmentum") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0024151") AnnotationAssertion(rdfs:label "tegmentum") SubClassOf(Annotation( "NIFSTD"^^xsd:string) ) # Class: (obsolete regional part of pontine tegmentum) AnnotationAssertion( "BIRNLEX:1041") AnnotationAssertion(Annotation( "BIRNLEX:1041") "regional part of pontine tegmentum") AnnotationAssertion(Annotation( "BIRNLEX:1041") Annotation( ) "regional part of pontine tegmentum") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0024161") AnnotationAssertion(rdfs:label "obsolete regional part of pontine tegmentum") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete regional part of inner ear) AnnotationAssertion( "BIRNLEX:1053") AnnotationAssertion(Annotation( "BIRNLEX:1053") "regional part of inner ear") AnnotationAssertion(Annotation( "BIRNLEX:1053") Annotation( ) "regional part of inner ear") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0024173") AnnotationAssertion(rdfs:label "obsolete regional part of inner ear") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete regional part orbital frontal cortex) AnnotationAssertion( "BIRNLEX:1058") AnnotationAssertion(Annotation( "BIRNLEX:1058") "regional part orbital frontal cortex") AnnotationAssertion(Annotation( "BIRNLEX:1058") Annotation( ) "regional part orbital frontal cortex") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0024177") AnnotationAssertion(rdfs:label "obsolete regional part orbital frontal cortex") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete superficial feature part of cerebral cortex) AnnotationAssertion( "BIRNLEX:1063") AnnotationAssertion(Annotation( "BIRNLEX:1063") "superficial feature part of cerebral cortex") AnnotationAssertion(Annotation( "BIRNLEX:1063") Annotation( ) "superficial feature part of cerebral cortex") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0024182") AnnotationAssertion(rdfs:label "obsolete superficial feature part of cerebral cortex") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (inferior transverse frontopolar gyrus) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:1064") AnnotationAssertion( "FMA:274414") AnnotationAssertion(Annotation( "BIRNLEX:1064") Annotation( ) "inferior transverse frontopolar gyrus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0024183") AnnotationAssertion(rdfs:label "inferior transverse frontopolar gyrus") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "NIFSTD"^^xsd:string) ObjectSomeValuesFrom( )) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (medial transverse frontopolar gyrus) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:1074") AnnotationAssertion(Annotation( "BIRNLEX:1074") "medial transverse frontopolar gyrus") AnnotationAssertion(Annotation( "BIRNLEX:1074") Annotation( ) "medial transverse frontopolar gyrus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0024193") AnnotationAssertion(rdfs:label "medial transverse frontopolar gyrus") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "NIFSTD"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (superior transverse frontopolar gyrus) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:1082") AnnotationAssertion( "FMA:274408") AnnotationAssertion(Annotation( "BIRNLEX:1082") "superior transverse frontopolar gyrus") AnnotationAssertion(Annotation( "BIRNLEX:1082") Annotation( ) "superior transverse frontopolar gyrus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0024201") AnnotationAssertion(rdfs:label "superior transverse frontopolar gyrus") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "NIFSTD"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (obsolete predominantly white regional part of cerebellar cortex) AnnotationAssertion( "BIRNLEX:1092") AnnotationAssertion(Annotation( "BIRNLEX:1092") "predominantly white regional part of cerebellar cortex") AnnotationAssertion(Annotation( "BIRNLEX:1092") Annotation( ) "predominantly white regional part of cerebellar cortex") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0024211") AnnotationAssertion(rdfs:label "obsolete predominantly white regional part of cerebellar cortex") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete predominantly gray regional part of frontal lobe) AnnotationAssertion( "BIRNLEX:1093") AnnotationAssertion( "UBERON:0001870") AnnotationAssertion(Annotation( "BIRNLEX:1093") "predominantly gray regional part of frontal lobe") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0024212") AnnotationAssertion(rdfs:label "obsolete predominantly gray regional part of frontal lobe") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete regional part of deep cerebellar nuclear complex) AnnotationAssertion( "BIRNLEX:1114") AnnotationAssertion(Annotation( "BIRNLEX:1114") "regional part of deep cerebellar nuclear complex") AnnotationAssertion(Annotation( "BIRNLEX:1114") Annotation( ) "regional part of deep cerebellar nuclear complex") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0024234") AnnotationAssertion(rdfs:label "obsolete regional part of deep cerebellar nuclear complex") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete regional part of autonomic nervous system) AnnotationAssertion( "BIRNLEX:1134") AnnotationAssertion(Annotation( "BIRNLEX:1134") "regional part of autonomic nervous system") AnnotationAssertion(Annotation( "BIRNLEX:1134") Annotation( ) "regional part of autonomic nervous system") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0024254") AnnotationAssertion(rdfs:label "obsolete regional part of autonomic nervous system") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete regional part of basal part of pons) AnnotationAssertion( "BIRNLEX:1168") AnnotationAssertion(Annotation( "BIRNLEX:1168") Annotation( ) "regional part of basal part of pons") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0024285") AnnotationAssertion(rdfs:label "obsolete regional part of basal part of pons") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete predominantly gray regional part of parietal lobe) AnnotationAssertion( "BIRNLEX:1198") AnnotationAssertion( "UBERON:0016530") AnnotationAssertion(Annotation( "BIRNLEX:1198") "predominantly gray regional part of parietal lobe") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0024314") AnnotationAssertion(rdfs:label "obsolete predominantly gray regional part of parietal lobe") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete predominantly gray regional part of anterior hypothalamic region) AnnotationAssertion( "BIRNLEX:1210") AnnotationAssertion(Annotation( "BIRNLEX:1210") "predominantly gray regional part of anterior hypothalamic region") AnnotationAssertion(Annotation( "BIRNLEX:1210") Annotation( ) "predominantly gray regional part of anterior hypothalamic region") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0024326") AnnotationAssertion(rdfs:label "obsolete predominantly gray regional part of anterior hypothalamic region") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete predominantly white regional part of cerebral peduncle) AnnotationAssertion( "BIRNLEX:1213") AnnotationAssertion(Annotation( "BIRNLEX:1213") "predominantly white regional part of cerebral peduncle") AnnotationAssertion(Annotation( "BIRNLEX:1213") Annotation( ) "predominantly white regional part of cerebral peduncle") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0024329") AnnotationAssertion(rdfs:label "obsolete predominantly white regional part of cerebral peduncle") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete predominantly white regional part of anterior hypothalamic region) AnnotationAssertion( "BIRNLEX:1219") AnnotationAssertion(Annotation( "BIRNLEX:1219") "predominantly white regional part of anterior hypothalamic region") AnnotationAssertion(Annotation( "BIRNLEX:1219") Annotation( ) "predominantly white regional part of anterior hypothalamic region") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0024335") AnnotationAssertion(rdfs:label "obsolete predominantly white regional part of anterior hypothalamic region") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete regional part of orbital gyri complex) AnnotationAssertion( "BIRNLEX:1231") AnnotationAssertion(Annotation( "BIRNLEX:1231") "regional part of orbital gyri complex") AnnotationAssertion(Annotation( "BIRNLEX:1231") Annotation( ) "regional part of orbital gyri complex") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0024347") AnnotationAssertion(rdfs:label "obsolete regional part of orbital gyri complex") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete regional part of transverse frontopolar gyri complex) AnnotationAssertion( "BIRNLEX:1265") AnnotationAssertion(Annotation( "BIRNLEX:1265") "regional part of transverse frontopolar gyri complex") AnnotationAssertion(Annotation( "BIRNLEX:1265") Annotation( ) "regional part of transverse frontopolar gyri complex") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0024381") AnnotationAssertion(rdfs:label "obsolete regional part of transverse frontopolar gyri complex") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (ventral nerve root of lumbar spinal cord) AnnotationAssertion( "BIRNLEX:1266") AnnotationAssertion(Annotation( "BIRNLEX:1266") Annotation( ) "ventral nerve root of lumbar spinal cord") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BIRNLEX:1266") "anterior nerve root of lumbar spinal cord") AnnotationAssertion( "UBERON:0024382") AnnotationAssertion(rdfs:label "ventral nerve root of lumbar spinal cord") SubClassOf(Annotation( "NIFSTD"^^xsd:string) ) DisjointClasses(Annotation( "NIFSTD"^^xsd:string) ) # Class: (obsolete regional part of Parahippocampal gyrus) AnnotationAssertion( "BIRNLEX:1278") AnnotationAssertion(Annotation( "BIRNLEX:1278") "regional part of parahippocampal gyrus") AnnotationAssertion(Annotation( "BIRNLEX:1278") Annotation( ) "regional part of parahippocampal gyrus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0024394") AnnotationAssertion(rdfs:label "obsolete regional part of Parahippocampal gyrus") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete regional part of tuberomammillary nucleus) AnnotationAssertion( "BIRNLEX:1281") AnnotationAssertion(Annotation( "BIRNLEX:1281") "regional part of tuberomammillary nucleus") AnnotationAssertion(Annotation( "BIRNLEX:1281") Annotation( ) "regional part of tuberomammillary nucleus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0024397") AnnotationAssertion(rdfs:label "obsolete regional part of tuberomammillary nucleus") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete predominantly gray regional part of medial mammillary nucleus) AnnotationAssertion( "BIRNLEX:1322") AnnotationAssertion(Annotation( "BIRNLEX:1322") "predominantly gray regional part of medial mammillary nucleus") AnnotationAssertion(Annotation( "BIRNLEX:1322") Annotation( ) "predominantly gray regional part of medial mammillary nucleus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0024437") AnnotationAssertion(rdfs:label "obsolete predominantly gray regional part of medial mammillary nucleus") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete superficial feature part of frontal lobe) AnnotationAssertion( "BIRNLEX:1324") AnnotationAssertion(Annotation( "BIRNLEX:1324") "superficial feature part of frontal lobe") AnnotationAssertion(Annotation( "BIRNLEX:1324") Annotation( ) "superficial feature part of frontal lobe") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0024439") AnnotationAssertion(rdfs:label "obsolete superficial feature part of frontal lobe") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete hemispheric parts of the cerebellar cortex) AnnotationAssertion( "BIRNLEX:1334") AnnotationAssertion( "UBERON:0002245") AnnotationAssertion(Annotation( "BIRNLEX:1334") "hemispheric parts of the cerebellar cortex") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0024449") AnnotationAssertion(rdfs:label "obsolete hemispheric parts of the cerebellar cortex") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete regional part of inferior parietal cortex) AnnotationAssertion( "BIRNLEX:1364") AnnotationAssertion(Annotation( "BIRNLEX:1364") Annotation( ) "regional part of inferior parietal cortex") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0024479") AnnotationAssertion(rdfs:label "obsolete regional part of inferior parietal cortex") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete predominantly gray regional part of occipital lobe) AnnotationAssertion( "BIRNLEX:1386") AnnotationAssertion( "UBERON:0016540") AnnotationAssertion(Annotation( "BIRNLEX:1386") "predominantly gray regional part of occipital lobe") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0024501") AnnotationAssertion(rdfs:label "obsolete predominantly gray regional part of occipital lobe") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete regional part of neuraxis cavity) AnnotationAssertion( "BIRNLEX:1402") AnnotationAssertion(Annotation( "BIRNLEX:1402") Annotation( ) "regional part of neuraxis cavity") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0024518") AnnotationAssertion(rdfs:label "obsolete regional part of neuraxis cavity") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete predominantly gray regional part of midbrain reticular formation) AnnotationAssertion( "BIRNLEX:1408") AnnotationAssertion(Annotation( "BIRNLEX:1408") "predominantly gray regional part of midbrain reticular formation") AnnotationAssertion(Annotation( "BIRNLEX:1408") Annotation( ) "predominantly gray regional part of midbrain reticular formation") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0024524") AnnotationAssertion(rdfs:label "obsolete predominantly gray regional part of midbrain reticular formation") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete predominantly gray regional part of oculomotor nuclear complex) AnnotationAssertion( "BIRNLEX:1412") AnnotationAssertion(Annotation( "BIRNLEX:1412") "predominantly gray regional part of oculomotor nuclear complex") AnnotationAssertion(Annotation( "BIRNLEX:1412") Annotation( ) "predominantly gray regional part of oculomotor nuclear complex") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0024528") AnnotationAssertion(rdfs:label "obsolete predominantly gray regional part of oculomotor nuclear complex") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete predominantly gray regional part of red nucleus) AnnotationAssertion( "BIRNLEX:1425") AnnotationAssertion(Annotation( "BIRNLEX:1425") "predominantly gray regional part of red nucleus") AnnotationAssertion(Annotation( "BIRNLEX:1425") Annotation( ) "predominantly gray regional part of red nucleus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0024541") AnnotationAssertion(rdfs:label "obsolete predominantly gray regional part of red nucleus") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete predominantly white regional part of red nucleus) AnnotationAssertion( "BIRNLEX:1434") AnnotationAssertion(Annotation( "BIRNLEX:1434") "predominantly white regional part of red nucleus") AnnotationAssertion(Annotation( "BIRNLEX:1434") Annotation( ) "predominantly white regional part of red nucleus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0024550") AnnotationAssertion(rdfs:label "obsolete predominantly white regional part of red nucleus") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete predominantly gray regional part of habenula) AnnotationAssertion( "BIRNLEX:1443") AnnotationAssertion(Annotation( "BIRNLEX:1443") Annotation( ) "predominantly gray regional part of habenula") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0024559") AnnotationAssertion(rdfs:label "obsolete predominantly gray regional part of habenula") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete regional part of sacral spinal cord white matter) AnnotationAssertion( "BIRNLEX:1506") AnnotationAssertion(Annotation( "BIRNLEX:1506") "regional part of sacral spinal cord white matter") AnnotationAssertion(Annotation( "BIRNLEX:1506") Annotation( ) "regional part of sacral spinal cord white matter") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0024621") AnnotationAssertion(rdfs:label "obsolete regional part of sacral spinal cord white matter") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete predominantly gray regional part of basal nuclear complex) AnnotationAssertion( "BIRNLEX:1507") AnnotationAssertion(Annotation( "BIRNLEX:1507") "predominantly gray regional part of basal nuclear complex") AnnotationAssertion(Annotation( "BIRNLEX:1507") Annotation( ) "predominantly gray regional part of basal nuclear complex") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0024622") AnnotationAssertion(rdfs:label "obsolete predominantly gray regional part of basal nuclear complex") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete superficial feature part of temporal lobe) AnnotationAssertion( "BIRNLEX:1538") AnnotationAssertion(Annotation( "BIRNLEX:1538") "superficial feature part of temporal lobe") AnnotationAssertion(Annotation( "BIRNLEX:1538") Annotation( ) "superficial feature part of temporal lobe") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0024653") AnnotationAssertion(rdfs:label "obsolete superficial feature part of temporal lobe") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete superficial feature part of hypophysis) AnnotationAssertion( "BIRNLEX:1593") AnnotationAssertion(Annotation( "BIRNLEX:1593") "superficial feature part of hypophysis") AnnotationAssertion(Annotation( "BIRNLEX:1593") Annotation( ) "superficial feature part of hypophysis") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0024708") AnnotationAssertion(rdfs:label "obsolete superficial feature part of hypophysis") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete regional part of cingulate gyrus) AnnotationAssertion( "BIRNLEX:1599") AnnotationAssertion(Annotation( "BIRNLEX:1599") "regional part of cingulate gyrus") AnnotationAssertion(Annotation( "BIRNLEX:1599") Annotation( ) "regional part of cingulate gyrus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0024714") AnnotationAssertion(rdfs:label "obsolete regional part of cingulate gyrus") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete regional part of outer ear) AnnotationAssertion( "BIRNLEX:1605") AnnotationAssertion(Annotation( "BIRNLEX:1605") "regional part of outer ear") AnnotationAssertion(Annotation( "BIRNLEX:1605") Annotation( ) "regional part of outer ear") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0024721") AnnotationAssertion(rdfs:label "obsolete regional part of outer ear") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete predominantly gray regional part of temporal lobe) AnnotationAssertion( "BIRNLEX:1633") AnnotationAssertion( "UBERON:0016538") AnnotationAssertion(Annotation( "BIRNLEX:1633") Annotation( ) "predominantly gray regional part of temporal lobe") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0024749") AnnotationAssertion(rdfs:label "obsolete predominantly gray regional part of temporal lobe") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete regional part of lumbar spinal cord white matter) AnnotationAssertion( "BIRNLEX:1647") AnnotationAssertion(Annotation( "BIRNLEX:1647") "regional part of lumbar spinal cord white matter") AnnotationAssertion(Annotation( "BIRNLEX:1647") Annotation( ) "regional part of lumbar spinal cord white matter") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0024762") AnnotationAssertion(rdfs:label "obsolete regional part of lumbar spinal cord white matter") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete predominantly gray regional part of thalamus) AnnotationAssertion( "BIRNLEX:1679") AnnotationAssertion(Annotation( "BIRNLEX:1679") "predominantly gray regional part of thalamus") AnnotationAssertion(Annotation( "BIRNLEX:1679") Annotation( ) "predominantly gray regional part of thalamus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0024793") AnnotationAssertion(rdfs:label "obsolete predominantly gray regional part of thalamus") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete predominantly white regional part of thalamus) AnnotationAssertion( "BIRNLEX:1686") AnnotationAssertion(Annotation( "BIRNLEX:1686") "predominantly white regional part of thalamus") AnnotationAssertion(Annotation( "BIRNLEX:1686") Annotation( ) "predominantly white regional part of thalamus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0024800") AnnotationAssertion(rdfs:label "obsolete predominantly white regional part of thalamus") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete regional part of middle ear) AnnotationAssertion( "BIRNLEX:1713") AnnotationAssertion(Annotation( "BIRNLEX:1713") "regional part of middle ear") AnnotationAssertion(Annotation( "BIRNLEX:1713") Annotation( ) "regional part of middle ear") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0024826") AnnotationAssertion(rdfs:label "obsolete regional part of middle ear") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete regional part of Preoptic area) AnnotationAssertion( "BIRNLEX:1715") AnnotationAssertion(Annotation( "BIRNLEX:1715") "regional part of preoptic area") AnnotationAssertion(Annotation( "BIRNLEX:1715") Annotation( ) "regional part of preoptic area") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0024828") AnnotationAssertion(rdfs:label "obsolete regional part of Preoptic area") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (left sub-lobar region) AnnotationAssertion( "BIRNLEX:1789") AnnotationAssertion(Annotation( "BIRNLEX:1789") "left sub-lobar region") AnnotationAssertion(Annotation( "BIRNLEX:1789") Annotation( ) "left sub-lobar region") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0024900") AnnotationAssertion(rdfs:label "left sub-lobar region") SubClassOf(Annotation( "NIFSTD"^^xsd:string) ) SubClassOf(Annotation( "NIFSTD"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (right sub-lobar region) AnnotationAssertion( "BIRNLEX:1790") AnnotationAssertion(Annotation( "BIRNLEX:1790") "right sub-lobar region") AnnotationAssertion(Annotation( "BIRNLEX:1790") Annotation( ) "right sub-lobar region") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0024901") AnnotationAssertion(rdfs:label "right sub-lobar region") SubClassOf(Annotation( "NIFSTD"^^xsd:string) ) SubClassOf(Annotation( "NIFSTD"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (obsolete regional part of retina) AnnotationAssertion( "BIRNLEX:1793") AnnotationAssertion(Annotation( "BIRNLEX:1793") "regional part of retina") AnnotationAssertion(Annotation( "BIRNLEX:1793") Annotation( ) "regional part of retina") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0024904") AnnotationAssertion(rdfs:label "obsolete regional part of retina") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete hemisphere parts of cerebral cortex) AnnotationAssertion( "BIRNLEX:1796") AnnotationAssertion( "UBERON:0001869") AnnotationAssertion(Annotation( "BIRNLEX:1796") "hemisphere parts of cerebral cortex") AnnotationAssertion(Annotation( "BIRNLEX:1796") Annotation( ) "hemisphere parts of cerebral cortex") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BIRNLEX:1796") "cerebral hemisphere") AnnotationAssertion( "UBERON:0024907") AnnotationAssertion(rdfs:label "obsolete hemisphere parts of cerebral cortex") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (circuit part of central nervous system) AnnotationAssertion(Annotation( "BIRNLEX:2513") "A collection of neuronal components interacting in a functional circuit. A neural circuit is bounded by the nervous sytem regions in which its participating neuronal components are contained (BB).") AnnotationAssertion( "BIRNLEX:2513") AnnotationAssertion(Annotation( "BIRNLEX:2513") "circuit part of central nervous system") AnnotationAssertion(Annotation( "BIRNLEX:2513") Annotation( ) "circuit part of central nervous system") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0024914") AnnotationAssertion(rdfs:label "circuit part of central nervous system") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (ganglion part of peripheral nervous system) AnnotationAssertion(Annotation( "BIRNLEX:2548") "A spatially aggregated collection of nerve cell body parts in the PNS, consisting of one or more subpopulations that share cell type, chemical phenotype, and connections. (CUMBO).") AnnotationAssertion( "BIRNLEX:2548") AnnotationAssertion(Annotation( "BIRNLEX:2548") "ganglion part of peripheral nervous system") AnnotationAssertion(Annotation( "BIRNLEX:2548") Annotation( ) "ganglion part of peripheral nervous system") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0024940") AnnotationAssertion(rdfs:label "ganglion part of peripheral nervous system") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete regional part of cochlear canal) AnnotationAssertion( "BIRNLEX:2554") AnnotationAssertion( "UMLS:C0458763") AnnotationAssertion(Annotation( "BIRNLEX:2554") "regional part of cochlear canal") AnnotationAssertion(Annotation( "BIRNLEX:2554") Annotation( ) "regional part of cochlear canal") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BIRNLEX:2554") "division of cochlear canal") AnnotationAssertion( "UBERON:0024946") AnnotationAssertion(rdfs:label "obsolete regional part of cochlear canal") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete duct part of cochlear canal) AnnotationAssertion( "BIRNLEX:2560") AnnotationAssertion( "UBERON:0001855") AnnotationAssertion(Annotation( "BIRNLEX:2560") "duct part of cochlear canal") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0024952") AnnotationAssertion(rdfs:label "obsolete duct part of cochlear canal") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete predominantly gray part of ventral cochlear nucleus) AnnotationAssertion( "BIRNLEX:2571") AnnotationAssertion(Annotation( "BIRNLEX:2571") "predominantly gray part of ventral cochlear nucleus") AnnotationAssertion(Annotation( "BIRNLEX:2571") Annotation( ) "predominantly gray part of ventral cochlear nucleus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0024962") AnnotationAssertion(rdfs:label "obsolete predominantly gray part of ventral cochlear nucleus") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete predominantly gray part of solitary nucleus) AnnotationAssertion( "BIRNLEX:2660") AnnotationAssertion(Annotation( "BIRNLEX:2660") Annotation( ) "predominantly gray part of solitary nucleus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0025033") AnnotationAssertion(rdfs:label "obsolete predominantly gray part of solitary nucleus") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete regional part of corticomedial nuclear complex) AnnotationAssertion( "BIRNLEX:2697") AnnotationAssertion(Annotation( "BIRNLEX:2697") Annotation( ) "regional part of corticomedial nuclear complex") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0025067") AnnotationAssertion(rdfs:label "obsolete regional part of corticomedial nuclear complex") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete regional part of olfactory cortex) AnnotationAssertion( "BIRNLEX:2708") AnnotationAssertion(Annotation( "BIRNLEX:2708") "regional part of olfactory cortex") AnnotationAssertion(Annotation( "BIRNLEX:2708") Annotation( ) "regional part of olfactory cortex") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0025078") AnnotationAssertion(rdfs:label "obsolete regional part of olfactory cortex") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (superior calcarine sulcus) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:4014") AnnotationAssertion(Annotation( "BIRNLEX:4014") "superior calcarine sulcus") AnnotationAssertion(Annotation( "BIRNLEX:4014") Annotation( ) "superior calcarine sulcus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BIRNLEX:4014") "sulcus calcarinus superior") AnnotationAssertion(Annotation( "BIRNLEX:4014") "superior ramus of calcarine fissure") AnnotationAssertion(Annotation( "BIRNLEX:4014") "upper calcarine sulcus") AnnotationAssertion( "UBERON:0025096") AnnotationAssertion(rdfs:label "superior calcarine sulcus") SubClassOf( ) # Class: (inferior occipital sulcus) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:4020") AnnotationAssertion(Annotation( "BIRNLEX:4020") "inferior occipital sulcus") AnnotationAssertion(Annotation( "BIRNLEX:4020") Annotation( ) "inferior occipital sulcus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BIRNLEX:4020") "sulcus occipitalis inferior") AnnotationAssertion( "UBERON:0025102") AnnotationAssertion(rdfs:label "inferior occipital sulcus") SubClassOf( ) # Class: (inferior calcarine sulcus) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:4021") AnnotationAssertion(Annotation( "BIRNLEX:4021") "inferior calcarine sulcus") AnnotationAssertion(Annotation( "BIRNLEX:4021") Annotation( ) "inferior calcarine sulcus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BIRNLEX:4021") "inferior ramus of calcarine fissure") AnnotationAssertion(Annotation( "BIRNLEX:4021") "lower calcarine sulcus") AnnotationAssertion(Annotation( "BIRNLEX:4021") "sulcus calcarinus inferior") AnnotationAssertion( "UBERON:0025103") AnnotationAssertion(rdfs:label "inferior calcarine sulcus") SubClassOf( ) # Class: (ectocalcarine sulcus) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:4022") AnnotationAssertion(Annotation( "BIRNLEX:4022") "ectocalcarine sulcus") AnnotationAssertion(Annotation( "BIRNLEX:4022") Annotation( ) "ectocalcarine sulcus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BIRNLEX:4022") "external calcarine fissure") AnnotationAssertion(Annotation( "BIRNLEX:4022") "external calcarine sulcus") AnnotationAssertion(Annotation( "BIRNLEX:4022") "sulcus ectocalcarinus") AnnotationAssertion( "UBERON:0025104") AnnotationAssertion(rdfs:label "ectocalcarine sulcus") SubClassOf( ) # Class: (obsolete superficial feature part of parietal cortex) AnnotationAssertion( "BIRNLEX:4034") AnnotationAssertion(Annotation( "BIRNLEX:4034") "superficial feature part of parietal cortex") AnnotationAssertion(Annotation( "BIRNLEX:4034") Annotation( ) "superficial feature part of parietal cortex") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0025116") AnnotationAssertion(rdfs:label "obsolete superficial feature part of parietal cortex") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete regional part of longitudinal fissure) AnnotationAssertion( "BIRNLEX:4046") AnnotationAssertion(Annotation( "BIRNLEX:4046") "regional part of longitudinal fissure") AnnotationAssertion(Annotation( "BIRNLEX:4046") Annotation( ) "regional part of longitudinal fissure") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0025128") AnnotationAssertion(rdfs:label "obsolete regional part of longitudinal fissure") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete cytoarchitectural part of occipital lobe) AnnotationAssertion( "BIRNLEX:4065") AnnotationAssertion(Annotation( "BIRNLEX:4065") "cytoarchitectural part of occipital lobe") AnnotationAssertion(Annotation( "BIRNLEX:4065") Annotation( ) "cytoarchitectural part of occipital lobe") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0025147") AnnotationAssertion(rdfs:label "obsolete cytoarchitectural part of occipital lobe") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete cytoarchitectural part of frontal lobe) AnnotationAssertion( "BIRNLEX:4066") AnnotationAssertion(Annotation( "BIRNLEX:4066") "cytoarchitectural part of frontal lobe") AnnotationAssertion(Annotation( "BIRNLEX:4066") Annotation( ) "cytoarchitectural part of frontal lobe") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0025148") AnnotationAssertion(rdfs:label "obsolete cytoarchitectural part of frontal lobe") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete regional part of gustatory epithelium) AnnotationAssertion( "BIRNLEX:4100") AnnotationAssertion( "http://uri.neuinfo.org/nif/nifstd/nifext_13") AnnotationAssertion( "UBERON:0025487") AnnotationAssertion(Annotation( "BIRNLEX:4100") Annotation( ) "regional part of gustatory epithelium") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0025182") AnnotationAssertion(rdfs:label "obsolete regional part of gustatory epithelium") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete regional part of cervical spinal cord white matter) AnnotationAssertion( "BIRNLEX:723") AnnotationAssertion(Annotation( "BIRNLEX:723") Annotation( ) "regional part of cervical spinal cord white matter") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0025236") AnnotationAssertion(rdfs:label "obsolete regional part of cervical spinal cord white matter") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete predominantly white regional part of fornix) AnnotationAssertion( "BIRNLEX:738") AnnotationAssertion(Annotation( "BIRNLEX:738") "predominantly white regional part of fornix") AnnotationAssertion(Annotation( "BIRNLEX:738") Annotation( ) "predominantly white regional part of fornix") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0025250") AnnotationAssertion(rdfs:label "obsolete predominantly white regional part of fornix") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete regional part of anterior commissure) AnnotationAssertion( "BIRNLEX:742") AnnotationAssertion(Annotation( "BIRNLEX:742") "regional part of anterior commissure") AnnotationAssertion(Annotation( "BIRNLEX:742") Annotation( ) "regional part of anterior commissure") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0025254") AnnotationAssertion(rdfs:label "obsolete regional part of anterior commissure") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (thalamic fiber tract) AnnotationAssertion( "BIRNLEX:749") AnnotationAssertion(Annotation( "BIRNLEX:749") "thalamic fiber tracts") AnnotationAssertion(Annotation( "BIRNLEX:749") Annotation( ) "thalamic fiber tracts") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0025261") AnnotationAssertion(rdfs:label "thalamic fiber tract") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete regional part of hippocampal formation) AnnotationAssertion( "BIRNLEX:757") AnnotationAssertion(Annotation( "BIRNLEX:757") "regional part of hippocampal formation") AnnotationAssertion(Annotation( "BIRNLEX:757") Annotation( ) "regional part of hippocampal formation") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0025268") AnnotationAssertion(rdfs:label "obsolete regional part of hippocampal formation") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete regional part of substantia nigra) AnnotationAssertion( "BIRNLEX:775") AnnotationAssertion(Annotation( "BIRNLEX:775") "regional part of substantia nigra") AnnotationAssertion(Annotation( "BIRNLEX:775") Annotation( ) "regional part of substantia nigra") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0025284") AnnotationAssertion(rdfs:label "obsolete regional part of substantia nigra") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete regional part of inferior frontal gyrus) AnnotationAssertion( "BIRNLEX:821") AnnotationAssertion(Annotation( "BIRNLEX:821") "regional part of inferior frontal gyrus") AnnotationAssertion(Annotation( "BIRNLEX:821") Annotation( ) "regional part of inferior frontal gyrus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0025327") AnnotationAssertion(rdfs:label "obsolete regional part of inferior frontal gyrus") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete predominantly gray regional part of limbic lobe) AnnotationAssertion( "BIRNLEX:831") AnnotationAssertion( "UBERON:0016542") AnnotationAssertion(Annotation( "BIRNLEX:831") "predominantly gray regional part of limbic lobe") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0025337") AnnotationAssertion(rdfs:label "obsolete predominantly gray regional part of limbic lobe") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete predominantly gray regional part of septal nuclear complex) AnnotationAssertion( "BIRNLEX:832") AnnotationAssertion(Annotation( "BIRNLEX:832") "predominantly gray regional part of septal nuclear complex") AnnotationAssertion(Annotation( "BIRNLEX:832") Annotation( ) "predominantly gray regional part of septal nuclear complex") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0025338") AnnotationAssertion(rdfs:label "obsolete predominantly gray regional part of septal nuclear complex") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete regional part of neurohypophysis) AnnotationAssertion( "BIRNLEX:921") AnnotationAssertion(Annotation( "BIRNLEX:921") "regional part of neurohypophysis") AnnotationAssertion(Annotation( "BIRNLEX:921") Annotation( ) "regional part of neurohypophysis") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0025409") AnnotationAssertion(rdfs:label "obsolete regional part of neurohypophysis") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete regional part of cingulate cortex) AnnotationAssertion( "BIRNLEX:930") AnnotationAssertion(Annotation( "BIRNLEX:930") "regional part of cingulate cortex") AnnotationAssertion(Annotation( "BIRNLEX:930") Annotation( ) "regional part of cingulate cortex") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0025418") AnnotationAssertion(rdfs:label "obsolete regional part of cingulate cortex") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete regional part of cerebellar white matter) AnnotationAssertion( "BIRNLEX:959") AnnotationAssertion(Annotation( "BIRNLEX:959") "regional part of cerebellar white matter") AnnotationAssertion(Annotation( "BIRNLEX:959") Annotation( ) "regional part of cerebellar white matter") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0025444") AnnotationAssertion(rdfs:label "obsolete regional part of cerebellar white matter") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete regional part of thoracic spinal cord gray matter) AnnotationAssertion( "BIRNLEX:989") AnnotationAssertion(Annotation( "BIRNLEX:989") "regional part of thoracic spinal cord gray matter") AnnotationAssertion(Annotation( "BIRNLEX:989") Annotation( ) "regional part of thoracic spinal cord gray matter") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0025473") AnnotationAssertion(rdfs:label "obsolete regional part of thoracic spinal cord gray matter") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (motor system) AnnotationAssertion(Annotation( ) "The part of the central nervous system that is involved with movement.") AnnotationAssertion( "NLXANAT:090805") AnnotationAssertion(Annotation( "NLXANAT:090805") "motor system") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0025525") AnnotationAssertion(rdfs:comment "It consists of the pyramidal and extrapyramidal system") AnnotationAssertion(rdfs:label "motor system") SubClassOf(Annotation( "NIFSTD"^^xsd:string) ) # Class: (proprioceptive system) AnnotationAssertion(Annotation( "NLXANAT:090814") "The sensory system for the sense of proprioception.") AnnotationAssertion( "NLXANAT:090814") AnnotationAssertion(Annotation( "NLXANAT:090814") "proprioceptive system") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0025533") AnnotationAssertion(rdfs:label "proprioceptive system") SubClassOf( ) # Class: (sensorimotor system) AnnotationAssertion(Annotation( "NLXANAT:090815") "sensorimotor") AnnotationAssertion( "NLXANAT:090815") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0025534") AnnotationAssertion(rdfs:label "sensorimotor system") SubClassOf(Annotation( "NIFSTD"^^xsd:string) ) # Class: (perirhinal cortex of primate of Burwell et al 1995) AnnotationAssertion(Annotation( "NLXANAT:1005014") "Cortical region near the rhinal sulcus in primate encompassing Brodmann's areas 35 and 36.") AnnotationAssertion( "NLXANAT:1005014") AnnotationAssertion(Annotation( "NLXANAT:1005014") "perirhinal cortex of primate of burwell et al 1995") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "UBERON:cjm"^^xsd:string) "perirhinal cortex of primate") AnnotationAssertion(Annotation( "UBERON:cjm"^^xsd:string) "primate perirhinal cortex") AnnotationAssertion( "UBERON:0025581") AnnotationAssertion(rdfs:label "perirhinal cortex of primate of Burwell et al 1995") SubClassOf(Annotation( "NIFSTD"^^xsd:string) ) # Class: (perirhinal cortex of rodent of Burwell et al 1995) AnnotationAssertion(Annotation( "NLXANAT:1005017") "Cortical region surrounding the posterior rhinal sulcus in the rat, encompassing areas 35 and 36 in the rat. Rostraly, it abuts the posterior insular cortex.") AnnotationAssertion( "NLXANAT:1005017") AnnotationAssertion(Annotation( "NLXANAT:1005017") "perirhinal cortex of rodent of burwell et al 1995") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NLXANAT:1005017") "perirhinal cortex of rodent") AnnotationAssertion(Annotation( "NLXANAT:1005017") "rodent perirhinal cortex") AnnotationAssertion( "UBERON:0025584") AnnotationAssertion(rdfs:label "perirhinal cortex of rodent of Burwell et al 1995") SubClassOf(Annotation( "NIFSTD"^^xsd:string) ) # Class: (histaminergic system) AnnotationAssertion(Annotation( "NLXANAT:1005021") "Any molecule, protein, cell, tissue or organ that is related to histamine.") AnnotationAssertion( "NLXANAT:1005021") AnnotationAssertion(Annotation( "NLXANAT:1005021") "histaminergic system") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0025588") AnnotationAssertion(rdfs:label "histaminergic system") SubClassOf( ) # Class: (catecholamine system) AnnotationAssertion(Annotation( "NLXANAT:1005022") "Any molecule, protein, cell, tissue or organ that is related to the catecholamines.") AnnotationAssertion( "NLXANAT:1005022") AnnotationAssertion(Annotation( "NLXANAT:1005022") "catecholamine system") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NLXANAT:1005022") "catecholaminergic system") AnnotationAssertion( "UBERON:0025589") AnnotationAssertion(rdfs:label "catecholamine system") SubClassOf( ) # Class: (gABAergic system) AnnotationAssertion(Annotation( "NLXANAT:1005024") "Any molecule, protein, cell, tissue or organ that is related to GABA.") AnnotationAssertion( "NLXANAT:1005024") AnnotationAssertion(Annotation( "NLXANAT:1005024") "gabaergic system") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0025591") AnnotationAssertion(rdfs:label "gABAergic system") SubClassOf( ) # Class: (glutamatergic system) AnnotationAssertion(Annotation( "NLXANAT:1005025") "Any molecule, protein, cell, tissue or organ that is related to glutamate (when in the role of a neurotransmitter).") AnnotationAssertion( "NLXANAT:1005025") AnnotationAssertion(Annotation( "NLXANAT:1005025") "glutamatergic system") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0025592") AnnotationAssertion(rdfs:label "glutamatergic system") SubClassOf( ) # Class: (serotonergic system) AnnotationAssertion(Annotation( "NLXANAT:1005026") "Any molecule, protein, cell, tissue or organ that is related to serotonin.") AnnotationAssertion( "NLXANAT:1005026") AnnotationAssertion(Annotation( "NLXANAT:1005026") "serotonergic system") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NLXANAT:1005026") "5-ht system") AnnotationAssertion(Annotation( "NLXANAT:1005026") "5ht system") AnnotationAssertion(Annotation( "NLXANAT:1005026") "serotonin system") AnnotationAssertion( "UBERON:0025593") AnnotationAssertion(rdfs:label "serotonergic system") SubClassOf( ) # Class: (cholinergic system) AnnotationAssertion(Annotation( "NLXANAT:1005028") "Any molecule, protein, cell, tissue or organ that is related to acetylcholine.") AnnotationAssertion( "NLXANAT:1005028") AnnotationAssertion(Annotation( "NLXANAT:1005028") "cholinergic system") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NLXANAT:1005028") "acetylcholine system") AnnotationAssertion(Annotation( "NLXANAT:1005028") "ach system") AnnotationAssertion( "UBERON:0025595") AnnotationAssertion(rdfs:label "cholinergic system") SubClassOf( ) # Class: (obsolete part of neuraxis) AnnotationAssertion(Annotation( "NLXANAT:1010010") "Part of brain and spinal cord excluding retina.") AnnotationAssertion( "NLXANAT:1010010") AnnotationAssertion(Annotation( "NLXANAT:1010010") "part of neuraxis") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0025619") AnnotationAssertion(rdfs:label "obsolete part of neuraxis") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (paravermis parts of the cerebellar cortex) AnnotationAssertion( "NLXANAT:20081237") AnnotationAssertion(Annotation( "NLXANAT:20081237") "paravermis parts of the cerebellar cortex") AnnotationAssertion(Annotation( "NLXANAT:20081237") Annotation( ) "paravermis parts of the cerebellar cortex") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NLXANAT:20081237") "pars intermedia") AnnotationAssertion( "UBERON:0025677") AnnotationAssertion(rdfs:label "paravermis parts of the cerebellar cortex") SubClassOf( ) SubClassOf(Annotation( "cjm"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (chemoarchitectural part of striatum) AnnotationAssertion( "NLXANAT:20090502") AnnotationAssertion(Annotation( "NLXANAT:20090502") "chemoarchitectural part of neostriatum") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0025736") AnnotationAssertion(rdfs:label "chemoarchitectural part of striatum") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete regional part of dorsal cochlear nucleus) AnnotationAssertion( "NLXANAT:20090510") AnnotationAssertion(Annotation( "NLXANAT:20090510") "regional part of dorsal cochlear nucleus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0025744") AnnotationAssertion(rdfs:label "obsolete regional part of dorsal cochlear nucleus") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (rostral sulcus) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:1012") AnnotationAssertion(Annotation( "BIRNLEX:1012") "rostral sulcus") AnnotationAssertion(Annotation( "BIRNLEX:1012") Annotation( ) "rostral sulcus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0025763") AnnotationAssertion(rdfs:label "rostral sulcus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete predominantly gray regional part of adenohypophysis) AnnotationAssertion( "BIRNLEX:1013") AnnotationAssertion(Annotation( "BIRNLEX:1013") "predominantly gray regional part of adenohypophysis") AnnotationAssertion(Annotation( "BIRNLEX:1013") Annotation( ) "predominantly gray regional part of adenohypophysis") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0025764") AnnotationAssertion(rdfs:label "obsolete predominantly gray regional part of adenohypophysis") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (posterior middle temporal sulcus) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:1017") AnnotationAssertion(Annotation( "BIRNLEX:1017") "posterior middle temporal sulcus") AnnotationAssertion(Annotation( "BIRNLEX:1017") Annotation( ) "posterior middle temporal sulcus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0025768") AnnotationAssertion(rdfs:label "posterior middle temporal sulcus") SubClassOf( ) DisjointClasses(Annotation( "lexical"^^xsd:string) ) # Class: (spur of arcuate sulcus) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:1021") AnnotationAssertion(Annotation( "BIRNLEX:1021") "spur of arcuate sulcus") AnnotationAssertion(Annotation( "BIRNLEX:1021") Annotation( ) "spur of arcuate sulcus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0025772") AnnotationAssertion(rdfs:label "spur of arcuate sulcus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete predominantly white regional part of basal part of pons) AnnotationAssertion( "BIRNLEX:1027") AnnotationAssertion(Annotation( "BIRNLEX:1027") "predominantly white regional part of basal part of pons") AnnotationAssertion(Annotation( "BIRNLEX:1027") Annotation( ) "predominantly white regional part of basal part of pons") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0025778") AnnotationAssertion(rdfs:label "obsolete predominantly white regional part of basal part of pons") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete predominantly gray regional part of pontine tegmentum) AnnotationAssertion( "BIRNLEX:1061") AnnotationAssertion(Annotation( "BIRNLEX:1061") "predominantly gray regional part of pontine tegmentum") AnnotationAssertion(Annotation( "BIRNLEX:1061") Annotation( ) "predominantly gray regional part of pontine tegmentum") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0025811") AnnotationAssertion(rdfs:label "obsolete predominantly gray regional part of pontine tegmentum") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete regional part of pontine reticular formation) AnnotationAssertion( "BIRNLEX:1077") AnnotationAssertion(Annotation( "BIRNLEX:1077") "regional part of pontine reticular formation") AnnotationAssertion(Annotation( "BIRNLEX:1077") Annotation( ) "regional part of pontine reticular formation") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0025827") AnnotationAssertion(rdfs:label "obsolete regional part of pontine reticular formation") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete regional part of superior olivary complex) AnnotationAssertion( "BIRNLEX:1078") AnnotationAssertion(Annotation( "BIRNLEX:1078") "regional part of superior olivary complex") AnnotationAssertion(Annotation( "BIRNLEX:1078") Annotation( ) "regional part of superior olivary complex") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0025828") AnnotationAssertion(rdfs:label "obsolete regional part of superior olivary complex") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (anterior parieto-occipital sulcus) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:1079") AnnotationAssertion(Annotation( "BIRNLEX:1079") "anterior parieto-occipital sulcus") AnnotationAssertion(Annotation( "BIRNLEX:1079") Annotation( ) "anterior parieto-occipital sulcus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BIRNLEX:1079") "medial parieto-occipital fissure") AnnotationAssertion(Annotation( "BIRNLEX:1079") "sulcus parieto-occipitalis anterior") AnnotationAssertion( "UBERON:0025829") AnnotationAssertion(rdfs:label "anterior parieto-occipital sulcus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete regional part of anterior nucleus of hypothalamus) AnnotationAssertion( "BIRNLEX:1098") AnnotationAssertion(Annotation( "BIRNLEX:1098") "regional part of anterior nucleus of hypothalamus") AnnotationAssertion(Annotation( "BIRNLEX:1098") Annotation( ) "regional part of anterior nucleus of hypothalamus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0025848") AnnotationAssertion(rdfs:label "obsolete regional part of anterior nucleus of hypothalamus") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (superior ramus of arcuate sulcus) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:1132") AnnotationAssertion(Annotation( "BIRNLEX:1132") "superior ramus of arcuate sulcus") AnnotationAssertion(Annotation( "BIRNLEX:1132") Annotation( ) "superior ramus of arcuate sulcus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0025883") AnnotationAssertion(rdfs:label "superior ramus of arcuate sulcus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete regional part of dentate gyrus) AnnotationAssertion( "BIRNLEX:1147") AnnotationAssertion(Annotation( "BIRNLEX:1147") "regional part of dentate gyrus") AnnotationAssertion(Annotation( "BIRNLEX:1147") Annotation( ) "regional part of dentate gyrus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0025897") AnnotationAssertion(rdfs:label "obsolete regional part of dentate gyrus") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete predominantly white regional part of hippocampal formation) AnnotationAssertion( "BIRNLEX:1149") AnnotationAssertion(Annotation( "BIRNLEX:1149") "predominantly white regional part of hippocampal formation") AnnotationAssertion(Annotation( "BIRNLEX:1149") Annotation( ) "predominantly white regional part of hippocampal formation") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0025899") AnnotationAssertion(rdfs:label "obsolete predominantly white regional part of hippocampal formation") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (principal sulcus) AnnotationAssertion(Annotation( "BIRNLEX:1154") "Sulcus in the frontal lobe of the macaque. (Brain Info).") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:1154") AnnotationAssertion(Annotation( "BIRNLEX:1154") "principal sulcus") AnnotationAssertion(Annotation( "BIRNLEX:1154") Annotation( ) "principal sulcus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0025903") AnnotationAssertion(rdfs:label "principal sulcus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete regional part of enteric nervous system) AnnotationAssertion( "BIRNLEX:1179") AnnotationAssertion(Annotation( "BIRNLEX:1179") Annotation( ) "regional part of enteric nervous system") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0025927") AnnotationAssertion(rdfs:label "obsolete regional part of enteric nervous system") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete predominantly gray regional part of basal part of pons) AnnotationAssertion( "BIRNLEX:1180") AnnotationAssertion(Annotation( "BIRNLEX:1180") "predominantly gray regional part of basal part of pons") AnnotationAssertion(Annotation( "BIRNLEX:1180") Annotation( ) "predominantly gray regional part of basal part of pons") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0025928") AnnotationAssertion(rdfs:label "obsolete predominantly gray regional part of basal part of pons") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete regional part of dentate nucleus) AnnotationAssertion( "BIRNLEX:1182") AnnotationAssertion(Annotation( "BIRNLEX:1182") "regional part of dentate nucleus") AnnotationAssertion(Annotation( "BIRNLEX:1182") Annotation( ) "regional part of dentate nucleus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0025930") AnnotationAssertion(rdfs:label "obsolete regional part of dentate nucleus") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete regional part of hippocampus proper) AnnotationAssertion( "BIRNLEX:1186") AnnotationAssertion(Annotation( "BIRNLEX:1186") "regional part of hippocampus proper") AnnotationAssertion(Annotation( "BIRNLEX:1186") Annotation( ) "regional part of hippocampus proper") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0025934") AnnotationAssertion(rdfs:label "obsolete regional part of hippocampus proper") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete predominantly gray regional part of orbital gyri complex) AnnotationAssertion( "BIRNLEX:1236") AnnotationAssertion(Annotation( "BIRNLEX:1236") "predominantly gray regional part of orbital gyri complex") AnnotationAssertion(Annotation( "BIRNLEX:1236") Annotation( ) "predominantly gray regional part of orbital gyri complex") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0025983") AnnotationAssertion(rdfs:label "obsolete predominantly gray regional part of orbital gyri complex") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete predominantly gray medial regional part of thalamus) AnnotationAssertion( "BIRNLEX:1246") AnnotationAssertion(Annotation( "BIRNLEX:1246") "predominantly gray medial regional part of thalamus") AnnotationAssertion(Annotation( "BIRNLEX:1246") Annotation( ) "predominantly gray medial regional part of thalamus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0025993") AnnotationAssertion(rdfs:label "obsolete predominantly gray medial regional part of thalamus") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete regional part of cerebral ventricular cavity) AnnotationAssertion( "BIRNLEX:1253") AnnotationAssertion(Annotation( "BIRNLEX:1253") "regional part of cerebral ventricular cavity") AnnotationAssertion(Annotation( "BIRNLEX:1253") Annotation( ) "regional part of cerebral ventricular cavity") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BIRNLEX:1253") "ventricles of brain") AnnotationAssertion( "UBERON:0026000") AnnotationAssertion(rdfs:label "obsolete regional part of cerebral ventricular cavity") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete regional part of median eminence) AnnotationAssertion( "BIRNLEX:1254") AnnotationAssertion(Annotation( "BIRNLEX:1254") "regional part of median eminence") AnnotationAssertion(Annotation( "BIRNLEX:1254") Annotation( ) "regional part of median eminence") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0026001") AnnotationAssertion(rdfs:label "obsolete regional part of median eminence") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (dorsal nerve root of lumbar spinal cord) AnnotationAssertion( "BIRNLEX:1259") AnnotationAssertion(Annotation( "BIRNLEX:1259") "dorsal nerve root of lumbar spinal cord") AnnotationAssertion(Annotation( "BIRNLEX:1259") Annotation( ) "dorsal nerve root of lumbar spinal cord") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BIRNLEX:1259") "posterior nerve root of lumbar spinal cord") AnnotationAssertion( "UBERON:0026006") AnnotationAssertion(rdfs:label "dorsal nerve root of lumbar spinal cord") SubClassOf(Annotation( "NIFSTD"^^xsd:string) ) # Class: (obsolete predominantly gray regional part of transverse frontopolar gyri complex) AnnotationAssertion( "BIRNLEX:1273") AnnotationAssertion(Annotation( "BIRNLEX:1273") "predominantly gray regional part of transverse frontopolar gyri complex") AnnotationAssertion(Annotation( "BIRNLEX:1273") Annotation( ) "predominantly gray regional part of transverse frontopolar gyri complex") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0026020") AnnotationAssertion(rdfs:label "obsolete predominantly gray regional part of transverse frontopolar gyri complex") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete predominantly gray regional part of Parahippocampal gyrus) AnnotationAssertion( "BIRNLEX:1285") AnnotationAssertion(Annotation( "BIRNLEX:1285") "predominantly gray regional part of parahippocampal gyrus") AnnotationAssertion(Annotation( "BIRNLEX:1285") Annotation( ) "predominantly gray regional part of parahippocampal gyrus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0026032") AnnotationAssertion(rdfs:label "obsolete predominantly gray regional part of Parahippocampal gyrus") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete predominantly gray dorsal regional part of thalamus) AnnotationAssertion( "BIRNLEX:1293") AnnotationAssertion(Annotation( "BIRNLEX:1293") "predominantly gray dorsal regional part of thalamus") AnnotationAssertion(Annotation( "BIRNLEX:1293") Annotation( ) "predominantly gray dorsal regional part of thalamus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0026040") AnnotationAssertion(rdfs:label "obsolete predominantly gray dorsal regional part of thalamus") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete predominantly white dorsal regional part of thalamus) AnnotationAssertion( "BIRNLEX:1301") AnnotationAssertion(Annotation( "BIRNLEX:1301") "predominantly white dorsal regional part of thalamus") AnnotationAssertion(Annotation( "BIRNLEX:1301") Annotation( ) "predominantly white dorsal regional part of thalamus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0026048") AnnotationAssertion(rdfs:label "obsolete predominantly white dorsal regional part of thalamus") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete regional part of middle frontal gyrus) AnnotationAssertion( "BIRNLEX:1317") AnnotationAssertion(Annotation( "BIRNLEX:1317") "regional part of middle frontal gyrus") AnnotationAssertion(Annotation( "BIRNLEX:1317") Annotation( ) "regional part of middle frontal gyrus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0026063") AnnotationAssertion(rdfs:label "obsolete regional part of middle frontal gyrus") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete regional part of suprachiasmatic nucleus) AnnotationAssertion( "BIRNLEX:1333") AnnotationAssertion(Annotation( "BIRNLEX:1333") Annotation( ) "regional part of paravsuprachiasmatic nucleus") AnnotationAssertion(Annotation( "BIRNLEX:1333") "regional part of suprachiasmatic nucleus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0026079") AnnotationAssertion(rdfs:label "obsolete regional part of suprachiasmatic nucleus") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete superficial feature part of cerebral peduncle) AnnotationAssertion( "BIRNLEX:1360") AnnotationAssertion(Annotation( "BIRNLEX:1360") "superficial feature part of cerebral peduncle") AnnotationAssertion(Annotation( "BIRNLEX:1360") Annotation( ) "superficial feature part of cerebral peduncle") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0026106") AnnotationAssertion(rdfs:label "obsolete superficial feature part of cerebral peduncle") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete regional part of neostriatum) AnnotationAssertion( "BIRNLEX:1367") AnnotationAssertion(Annotation( "BIRNLEX:1367") "regional part of neostriatum") AnnotationAssertion(Annotation( "BIRNLEX:1367") Annotation( ) "regional part of neostriatum") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0026113") AnnotationAssertion(rdfs:label "obsolete regional part of neostriatum") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete predominantly Gray regional part of inferior parietal cortex) AnnotationAssertion( "BIRNLEX:1371") AnnotationAssertion(Annotation( "BIRNLEX:1371") "predominantly gray regional part of inferior parietal cortex") AnnotationAssertion(Annotation( "BIRNLEX:1371") Annotation( ) "predominantly gray regional part of inferior parietal cortex") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0026117") AnnotationAssertion(rdfs:label "obsolete predominantly Gray regional part of inferior parietal cortex") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (annectant gyrus) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:1391") AnnotationAssertion(Annotation( "BIRNLEX:1391") "annectant gyrus") AnnotationAssertion(Annotation( "BIRNLEX:1391") Annotation( ) "annectant gyrus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0026137") AnnotationAssertion(rdfs:label "annectant gyrus") SubClassOf( ) # Class: (obsolete regional part of paraventricular nucleus of hypothalamus) AnnotationAssertion( "BIRNLEX:1406") AnnotationAssertion(Annotation( "BIRNLEX:1406") "regional part of paraventricular nucleus of hypothalamus") AnnotationAssertion(Annotation( "BIRNLEX:1406") Annotation( ) "regional part of paraventricular nucleus of hypothalamus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0026153") AnnotationAssertion(rdfs:label "obsolete regional part of paraventricular nucleus of hypothalamus") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (sacral spinal cord white matter) AnnotationAssertion( "BIRNLEX:1500") AnnotationAssertion(Annotation( "BIRNLEX:1500") "sacral spinal cord white matter") AnnotationAssertion(Annotation( "BIRNLEX:1500") Annotation( ) "sacral spinal cord white matter") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0026246") AnnotationAssertion(rdfs:label "sacral spinal cord white matter") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses(Annotation( "NIFSTD"^^xsd:string) ) # Class: (obsolete predominantly gray anterior regional part of thalamus) AnnotationAssertion( "BIRNLEX:1524") AnnotationAssertion(Annotation( "BIRNLEX:1524") "predominantly gray anterior regional part of thalamus") AnnotationAssertion(Annotation( "BIRNLEX:1524") Annotation( ) "predominantly gray anterior regional part of thalamus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0026270") AnnotationAssertion(rdfs:label "obsolete predominantly gray anterior regional part of thalamus") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete regional part of cervical spinal cord gray matter) AnnotationAssertion( "BIRNLEX:1525") AnnotationAssertion(Annotation( "BIRNLEX:1525") "regional part of cervical spinal cord gray matter") AnnotationAssertion(Annotation( "BIRNLEX:1525") Annotation( ) "regional part of cervical spinal cord gray matter") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0026271") AnnotationAssertion(rdfs:label "obsolete regional part of cervical spinal cord gray matter") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (thoracic spinal cord gray commissure) AnnotationAssertion( "BIRNLEX:1547") AnnotationAssertion(Annotation( "BIRNLEX:1547") "thoracic spinal cord gray commissure") AnnotationAssertion(Annotation( "BIRNLEX:1547") Annotation( ) "thoracic spinal cord gray commissure") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0026293") AnnotationAssertion(rdfs:label "thoracic spinal cord gray commissure") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete predominantly gray regional part of cingulate gyrus) AnnotationAssertion( "BIRNLEX:1550") AnnotationAssertion(Annotation( "BIRNLEX:1550") "predominantly gray regional part of cingulate gyrus") AnnotationAssertion(Annotation( "BIRNLEX:1550") Annotation( ) "predominantly gray regional part of cingulate gyrus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0026296") AnnotationAssertion(rdfs:label "obsolete predominantly gray regional part of cingulate gyrus") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete regional part of transverse temporal cortex) AnnotationAssertion( "BIRNLEX:1578") AnnotationAssertion(Annotation( "BIRNLEX:1578") "regional part of transverse temporal cortex") AnnotationAssertion(Annotation( "BIRNLEX:1578") Annotation( ) "regional part of transverse temporal cortex") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0026324") AnnotationAssertion(rdfs:label "obsolete regional part of transverse temporal cortex") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (inferior ramus of arcuate sulcus) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:1635") AnnotationAssertion(Annotation( "BIRNLEX:1635") "inferior ramus of arcuate sulcus") AnnotationAssertion(Annotation( "BIRNLEX:1635") Annotation( ) "inferior ramus of arcuate sulcus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0026382") AnnotationAssertion(rdfs:label "inferior ramus of arcuate sulcus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lateral orbital sulcus) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:1637") AnnotationAssertion(Annotation( "BIRNLEX:1637") "lateral orbital sulcus") AnnotationAssertion(Annotation( "BIRNLEX:1637") Annotation( ) "lateral orbital sulcus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0026384") AnnotationAssertion(rdfs:label "lateral orbital sulcus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses(Annotation( "lexical"^^xsd:string) ) # Class: (lumbar spinal cord white matter) AnnotationAssertion( "BIRNLEX:1639") AnnotationAssertion(Annotation( "BIRNLEX:1639") "lumbar spinal cord white matter") AnnotationAssertion(Annotation( "BIRNLEX:1639") Annotation( ) "lumbar spinal cord white matter") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0026386") AnnotationAssertion(rdfs:label "lumbar spinal cord white matter") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses(Annotation( "NIFSTD"^^xsd:string) ) # Class: (medial orbital sulcus) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:1644") AnnotationAssertion(Annotation( "BIRNLEX:1644") "medial orbital sulcus") AnnotationAssertion(Annotation( "BIRNLEX:1644") Annotation( ) "medial orbital sulcus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0026391") AnnotationAssertion(rdfs:label "medial orbital sulcus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete predominantly gray ventral regional part of thalamus) AnnotationAssertion( "BIRNLEX:1701") AnnotationAssertion(Annotation( "BIRNLEX:1701") "predominantly gray ventral regional part of thalamus") AnnotationAssertion(Annotation( "BIRNLEX:1701") Annotation( ) "predominantly gray ventral regional part of thalamus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0026445") AnnotationAssertion(rdfs:label "obsolete predominantly gray ventral regional part of thalamus") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete predominantly gray posterior regional part of thalamus) AnnotationAssertion( "BIRNLEX:1712") AnnotationAssertion(Annotation( "BIRNLEX:1712") "predominantly gray posterior regional part of thalamus") AnnotationAssertion(Annotation( "BIRNLEX:1712") Annotation( ) "predominantly gray posterior regional part of thalamus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0026456") AnnotationAssertion(rdfs:label "obsolete predominantly gray posterior regional part of thalamus") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete regional part of cochlea) AnnotationAssertion( "BIRNLEX:1794") AnnotationAssertion( "UMLS:C0931696") AnnotationAssertion(Annotation( "BIRNLEX:1794") Annotation( ) "regional part of cochlea") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0026536") AnnotationAssertion(rdfs:label "obsolete regional part of cochlea") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (dorsomedial subnucleus of solitary tract) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:1799") AnnotationAssertion(Annotation( "BIRNLEX:1799") "dorsomedial subnucleus of solitary tract") AnnotationAssertion(Annotation( "BIRNLEX:1799") Annotation( ) "dorsomedial subnucleus of solitary tract") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BIRNLEX:1799") "nucleus of the solitary tract, dorsomedial part") AnnotationAssertion( "UBERON:0026541") AnnotationAssertion(rdfs:label "dorsomedial subnucleus of solitary tract") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (principal neuronal circuit) AnnotationAssertion(Annotation( "BIRNLEX:2514") "A neuronal circuit bearing a principal projection neuron whose axon extends beyond the region where its soma is located to synapse on the dendrites of cells in other regions of the nervous system (BB).") AnnotationAssertion( "BIRNLEX:2514") AnnotationAssertion(Annotation( "BIRNLEX:2514") Annotation( ) "principal neuronal circuit") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0026546") AnnotationAssertion(rdfs:label "principal neuronal circuit") SubClassOf(Annotation( "NIFSTD"^^xsd:string) ) # Class: (intrinsic neuronal circuit) AnnotationAssertion(Annotation( "BIRNLEX:2515") "A neuronal circuit where all the participating neurons are bounded within a defined and limited region of the nervous system.(BB).") AnnotationAssertion( "BIRNLEX:2515") AnnotationAssertion(Annotation( "BIRNLEX:2515") "intrinsic neuronal circuit") AnnotationAssertion(Annotation( "BIRNLEX:2515") Annotation( ) "intrinsic neuronal circuit") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0026547") AnnotationAssertion(rdfs:label "intrinsic neuronal circuit") SubClassOf(Annotation( "NIFSTD"^^xsd:string) ) # Class: (obsolete regional part of macula) AnnotationAssertion( "BIRNLEX:2541") AnnotationAssertion(Annotation( "BIRNLEX:2541") "regional part of macula") AnnotationAssertion(Annotation( "BIRNLEX:2541") Annotation( ) "regional part of macula") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0026564") AnnotationAssertion(rdfs:label "obsolete regional part of macula") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (tympanic canal) AnnotationAssertion(Annotation( ) "A minute canal that passes from the petrous portion of the temporal bone between the jugular fossa and carotid canal to the floor of the tympanic cavity and transmits the tympanic branch of the glossopharyngeal nerve.") AnnotationAssertion( "BIRNLEX:2561") AnnotationAssertion( "FMA:56460") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) Annotation( ) "canaliculus tympanicus") AnnotationAssertion(Annotation( "FMA:56460") "jacobson's canaliculus") AnnotationAssertion(Annotation( "BIRNLEX:2561") "tympanic canal") AnnotationAssertion(Annotation( "BIRNLEX:2561") Annotation( ) "tympanic canal") AnnotationAssertion(Annotation( ) Annotation( "FMA:56460") "tympanic canaliculus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0026584") AnnotationAssertion(rdfs:label "tympanic canal") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (vestibular canal) AnnotationAssertion(Annotation( ) "The division of the spiral canal of the cochlea lying above the spiral lamina and the vestibular membrane.") AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:2563") AnnotationAssertion( "FMA:56451") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) Annotation( ) "canaliculus vestibuli") AnnotationAssertion(Annotation( "BIRNLEX:2563") "vestibular canal") AnnotationAssertion(Annotation( "BIRNLEX:2563") Annotation( ) "vestibular canal") AnnotationAssertion(Annotation( "FMA:56451") "vestibular canaliculus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0026586") AnnotationAssertion(rdfs:label "vestibular canal") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (obsolete regional part of cochlear duct) AnnotationAssertion( "BIRNLEX:2565") AnnotationAssertion( "UMLS:C1186240") AnnotationAssertion(Annotation( "BIRNLEX:2565") "regional part of cochlear duct") AnnotationAssertion(Annotation( "BIRNLEX:2565") Annotation( ) "regional part of cochlear duct") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BIRNLEX:2565") "division of cochlear canal") AnnotationAssertion( "UBERON:0026588") AnnotationAssertion(rdfs:label "obsolete regional part of cochlear duct") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (dorsolateral subnucleus of solitary tract) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:2659") AnnotationAssertion(Annotation( "BIRNLEX:2659") "dorsolateral subnucleus of solitary tract") AnnotationAssertion(Annotation( "BIRNLEX:2659") Annotation( ) "dorsolateral subnucleus of solitary tract") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BIRNLEX:2659") "nucleus of the solitary tract, dorsolateral part") AnnotationAssertion( "UBERON:0026663") AnnotationAssertion(rdfs:label "dorsolateral subnucleus of solitary tract") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (parvicellular subnucleus of solitary tract) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:2663") AnnotationAssertion(Annotation( "BIRNLEX:2663") "parvicellular subnucleus of solitary tract") AnnotationAssertion(Annotation( "BIRNLEX:2663") Annotation( ) "parvicellular subnucleus of solitary tract") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0026666") AnnotationAssertion(rdfs:label "parvicellular subnucleus of solitary tract") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete regional part of basolateral nuclear complex) AnnotationAssertion( "BIRNLEX:2685") AnnotationAssertion(Annotation( "BIRNLEX:2685") "regional part of basolateral nuclear complex") AnnotationAssertion(Annotation( "BIRNLEX:2685") Annotation( ) "regional part of basolateral nuclear complex") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0026686") AnnotationAssertion(rdfs:label "obsolete regional part of basolateral nuclear complex") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete predominantly gray part of corticomedial nuclear complex) AnnotationAssertion( "BIRNLEX:2699") AnnotationAssertion(Annotation( "BIRNLEX:2699") "predominantly gray part of corticomedial nuclear complex") AnnotationAssertion(Annotation( "BIRNLEX:2699") Annotation( ) "predominantly gray part of corticomedial nuclear complex") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0026700") AnnotationAssertion(rdfs:label "obsolete predominantly gray part of corticomedial nuclear complex") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (intermediate frontal sulcus) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:4006") AnnotationAssertion(Annotation( "BIRNLEX:4006") "intermediate frontal sulcus") AnnotationAssertion(Annotation( "BIRNLEX:4006") Annotation( ) "intermediate frontal sulcus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BIRNLEX:4006") "sulcus frontalis intermedius") AnnotationAssertion( "UBERON:0026719") AnnotationAssertion(rdfs:label "intermediate frontal sulcus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete regional part of posterior superior frontal sulcus) AnnotationAssertion( "BIRNLEX:4007") AnnotationAssertion(Annotation( "BIRNLEX:4007") "regional part of posterior superior frontal sulcus") AnnotationAssertion(Annotation( "BIRNLEX:4007") Annotation( ) "regional part of posterior superior frontal sulcus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0026720") AnnotationAssertion(rdfs:label "obsolete regional part of posterior superior frontal sulcus") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (medial precentral sulcus) AnnotationAssertion(Annotation( "BIRNLEX:4008") "A superficial feature of the frontal lobe that extends from the dorsal surface onto the medial surface of the superior frontal gyrus (Ono-90). (NN).") AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:4008") AnnotationAssertion(Annotation( "BIRNLEX:4008") Annotation( ) "medial precentral sulcus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0026721") AnnotationAssertion(rdfs:label "medial precentral sulcus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (transverse parietal sulcus) AnnotationAssertion(Annotation( "BIRNLEX:4009") "A sulcus in the human parietal lobe that branches dorsally from the intraparietal sulcus (Savel'ev-96). (NN).") AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:4009") AnnotationAssertion(Annotation( "BIRNLEX:4009") "transverse parietal sulcus") AnnotationAssertion(Annotation( "BIRNLEX:4009") Annotation( ) "transverse parietal sulcus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0026722") AnnotationAssertion(rdfs:label "transverse parietal sulcus") SubClassOf( ) # Class: (inferior parietal sulcus) AnnotationAssertion( "BIRNLEX:4010") AnnotationAssertion(Annotation( "BIRNLEX:4010") "inferior parietal sulcus") AnnotationAssertion(Annotation( "BIRNLEX:4010") Annotation( ) "inferior parietal sulcus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0026723") AnnotationAssertion(rdfs:label "inferior parietal sulcus") SubClassOf( ) # Class: (superior parietal sulcus) AnnotationAssertion(Annotation( "BIRNLEX:4011") "A superficial feature of the parietal lobe that extends from the dorsal surface of the superior parietal lobule across the margin of the parietal lobe into the precuneus (Ono-90). (NN).") AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:4011") AnnotationAssertion(Annotation( "BIRNLEX:4011") "superior parietal sulcus") AnnotationAssertion(Annotation( "BIRNLEX:4011") Annotation( ) "superior parietal sulcus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0026724") AnnotationAssertion(rdfs:label "superior parietal sulcus") SubClassOf( ) # Class: (angular sulcus) AnnotationAssertion(Annotation( "BIRNLEX:4012") "A superficial feature of the parietal lobe. It is the portion of the superior temporal sulcus that extends into the angular gyrus (Ono-90). (NN).") AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:4012") AnnotationAssertion( "HBA:9384") AnnotationAssertion(Annotation( "BIRNLEX:4012") "angular sulcus") AnnotationAssertion(Annotation( "BIRNLEX:4012") Annotation( ) "angular sulcus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0026725") AnnotationAssertion(rdfs:label "angular sulcus") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "NIFSTD"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "NIFSTD"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (inferior sagittal sulcus) AnnotationAssertion( "BIRNLEX:4047") AnnotationAssertion(Annotation( "BIRNLEX:4047") "inferior sagittal sulcus") AnnotationAssertion(Annotation( "BIRNLEX:4047") Annotation( ) "inferior sagittal sulcus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0026760") AnnotationAssertion(rdfs:label "inferior sagittal sulcus") SubClassOf( ) # Class: (superior sagittal sulcus) AnnotationAssertion( "BIRNLEX:4048") AnnotationAssertion(Annotation( "BIRNLEX:4048") "superior sagittal sulcus") AnnotationAssertion(Annotation( "BIRNLEX:4048") Annotation( ) "superior sagittal sulcus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0026761") AnnotationAssertion(rdfs:label "superior sagittal sulcus") SubClassOf( ) # Class: (obsolete regional part of calcarine sulcus) AnnotationAssertion( "BIRNLEX:4049") AnnotationAssertion(Annotation( "BIRNLEX:4049") "regional part of calcarine sulcus") AnnotationAssertion(Annotation( "BIRNLEX:4049") Annotation( ) "regional part of calcarine sulcus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0026762") AnnotationAssertion(rdfs:label "obsolete regional part of calcarine sulcus") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (Hadjikhani et al. (1998) visuotopic partition scheme region) AnnotationAssertion( "BIRNLEX:4052") AnnotationAssertion(Annotation( "BIRNLEX:4052") "Hadjikhani et al. (1998) visuotopic partition scheme region") AnnotationAssertion(Annotation( "BIRNLEX:4052") Annotation( ) "Hadjikhani et al. (1998) visuotopic partition scheme region") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BIRNLEX:4052") "Hadjikhani visuotopic areas") AnnotationAssertion(Annotation( "BIRNLEX:4052") "Hadjikhani visuotopic parcellation scheme") AnnotationAssertion(Annotation( "BIRNLEX:4052") "Hadjikhani visuotopic partition scheme") AnnotationAssertion( "UBERON:0026765") AnnotationAssertion(rdfs:label "Hadjikhani et al. (1998) visuotopic partition scheme region") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (Tootell and Hadjikhani (2001) LOC/LOP complex) AnnotationAssertion(Annotation( "BIRNLEX:4062") "Cortical parcel in occipital cortex of human according to Tootell and Hadjikhani 2001 that is activated preferentially by more peripheral stimuli compared to the adjacent lateral occipital central parcel.") AnnotationAssertion( "BIRNLEX:4062") AnnotationAssertion(Annotation( "BIRNLEX:4062") "tootell and Hadjikhani (2001) loc/lop complex") AnnotationAssertion(Annotation( "BIRNLEX:4062") Annotation( ) "tootell and Hadjikhani (2001) loc/lop complex") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0026775") AnnotationAssertion(rdfs:label "Tootell and Hadjikhani (2001) LOC/LOP complex") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (Press, Brewer, Dougherty, Wade and Wandell (2001) visuotopic area V7) AnnotationAssertion( "BIRNLEX:4063") AnnotationAssertion(Annotation( "BIRNLEX:4063") "press, brewer, dougherty, wade and wandell (2001) visuotopic area v7") AnnotationAssertion(Annotation( "BIRNLEX:4063") Annotation( ) "press, brewer, dougherty, wade and wandell (2001) visuotopic area v7") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0026776") AnnotationAssertion(rdfs:label "Press, Brewer, Dougherty, Wade and Wandell (2001) visuotopic area V7") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (Ongur, Price, and Ferry (2003) prefrontal cortical partition scheme region) AnnotationAssertion( "BIRNLEX:4064") AnnotationAssertion(Annotation( "BIRNLEX:4064") "ongur, price, and ferry (2003) prefrontal cortical partition scheme region") AnnotationAssertion(Annotation( "BIRNLEX:4064") Annotation( ) "ongur, price, and ferry (2003) prefrontal cortical partition scheme region") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BIRNLEX:4064") "ongur, price, and ferry (2003) prefrontal cortical areas") AnnotationAssertion(Annotation( "BIRNLEX:4064") "ongur, price, and ferry (2003) prefrontal cortical parcellation scheme") AnnotationAssertion(Annotation( "BIRNLEX:4064") "ongur, price, and ferry (2003) prefrontal cortical partition scheme") AnnotationAssertion( "UBERON:0026777") AnnotationAssertion(rdfs:label "Ongur, Price, and Ferry (2003) prefrontal cortical partition scheme region") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete predominantly gray regional part of Preoptic area) AnnotationAssertion( "BIRNLEX:700") AnnotationAssertion(Annotation( "BIRNLEX:700") "predominantly gray regional part of preoptic area") AnnotationAssertion(Annotation( "BIRNLEX:700") Annotation( ) "predominantly gray regional part of preoptic area") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0026845") AnnotationAssertion(rdfs:label "obsolete predominantly gray regional part of Preoptic area") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete predominantly gray regional part of substantia nigra) AnnotationAssertion( "BIRNLEX:782") AnnotationAssertion(Annotation( "BIRNLEX:782") "predominantly gray regional part of substantia nigra") AnnotationAssertion(Annotation( "BIRNLEX:782") Annotation( ) "predominantly gray regional part of substantia nigra") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0026921") AnnotationAssertion(rdfs:label "obsolete predominantly gray regional part of substantia nigra") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete predominantly gray regional part of inferior frontal gyrus) AnnotationAssertion( "BIRNLEX:829") AnnotationAssertion(Annotation( "BIRNLEX:829") "predominantly gray regional part of inferior frontal gyrus") AnnotationAssertion(Annotation( "BIRNLEX:829") Annotation( ) "predominantly gray regional part of inferior frontal gyrus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0026966") AnnotationAssertion(rdfs:label "obsolete predominantly gray regional part of inferior frontal gyrus") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete predominantly white regional part of anterior commissure) AnnotationAssertion( "BIRNLEX:839") AnnotationAssertion(Annotation( "BIRNLEX:839") "predominantly white regional part of anterior commissure") AnnotationAssertion(Annotation( "BIRNLEX:839") Annotation( ) "predominantly white regional part of anterior commissure") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0026975") AnnotationAssertion(rdfs:label "obsolete predominantly white regional part of anterior commissure") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete predominantly gray midline regional part of thalamus) AnnotationAssertion( "BIRNLEX:849") AnnotationAssertion(Annotation( "BIRNLEX:849") Annotation( ) "predominantly gray midline regional part of thalamus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0026982") AnnotationAssertion(rdfs:label "obsolete predominantly gray midline regional part of thalamus") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete regional part of superior temporal sulcus) AnnotationAssertion( "BIRNLEX:856") AnnotationAssertion(Annotation( "BIRNLEX:856") "regional part of superior temporal sulcus") AnnotationAssertion(Annotation( "BIRNLEX:856") Annotation( ) "regional part of superior temporal sulcus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0026986") AnnotationAssertion(rdfs:label "obsolete regional part of superior temporal sulcus") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete regional part of thoracic spinal cord white matter) AnnotationAssertion( "BIRNLEX:885") AnnotationAssertion(Annotation( "BIRNLEX:885") "regional part of thoracic spinal cord white matter") AnnotationAssertion(Annotation( "BIRNLEX:885") Annotation( ) "regional part of thoracic spinal cord white matter") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0027007") AnnotationAssertion(rdfs:label "obsolete regional part of thoracic spinal cord white matter") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete predominantly gray regional part of neurohypophysis) AnnotationAssertion( "BIRNLEX:933") AnnotationAssertion(Annotation( "BIRNLEX:933") "predominantly gray regional part of neurohypophysis") AnnotationAssertion(Annotation( "BIRNLEX:933") Annotation( ) "predominantly gray regional part of neurohypophysis") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0027052") AnnotationAssertion(rdfs:label "obsolete predominantly gray regional part of neurohypophysis") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (isthmus of cingulate cortex) AnnotationAssertion( "BIRNLEX:943") AnnotationAssertion(Annotation( "BIRNLEX:943") "isthmus of cingulate cortex") AnnotationAssertion(Annotation( "BIRNLEX:943") Annotation( ) "isthmus of cingulate cortex") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0027061") AnnotationAssertion(rdfs:label "isthmus of cingulate cortex") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete regional part of Anterior cingulate cortex) AnnotationAssertion( "BIRNLEX:960") AnnotationAssertion(Annotation( "BIRNLEX:960") "regional part of anterior cingulate cortex") AnnotationAssertion(Annotation( "BIRNLEX:960") Annotation( ) "regional part of anterior cingulate cortex") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0027076") AnnotationAssertion(rdfs:label "obsolete regional part of Anterior cingulate cortex") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete predominantly gray intralaminal regional part of thalamus) AnnotationAssertion( "BIRNLEX:962") AnnotationAssertion(Annotation( "BIRNLEX:962") "predominantly gray intralaminal regional part of thalamus") AnnotationAssertion(Annotation( "BIRNLEX:962") Annotation( ) "predominantly gray intralaminal regional part of thalamus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0027078") AnnotationAssertion(rdfs:label "obsolete predominantly gray intralaminal regional part of thalamus") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete regional part of cerebellar peduncular complex) AnnotationAssertion( "BIRNLEX:979") AnnotationAssertion(Annotation( "BIRNLEX:979") "regional part of cerebellar peduncular complex") AnnotationAssertion(Annotation( "BIRNLEX:979") Annotation( ) "regional part of cerebellar peduncular complex") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0027094") AnnotationAssertion(rdfs:label "obsolete regional part of cerebellar peduncular complex") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete predominantly gray lateral regional part of thalamus) AnnotationAssertion( "BIRNLEX:988") AnnotationAssertion(Annotation( "BIRNLEX:988") "predominantly gray lateral regional part of thalamus") AnnotationAssertion(Annotation( "BIRNLEX:988") Annotation( ) "predominantly gray lateral regional part of thalamus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0027103") AnnotationAssertion(rdfs:label "obsolete predominantly gray lateral regional part of thalamus") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (lateral eminence of hypophysis) AnnotationAssertion( "lateral eminence") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:994") AnnotationAssertion(Annotation( "BIRNLEX:994") "lateral eminence of hypophysis") AnnotationAssertion(Annotation( "BIRNLEX:994") Annotation( ) "lateral eminence of hypophysis") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0027109") AnnotationAssertion(rdfs:label "lateral eminence of hypophysis") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "NIFSTD"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (anterior middle temporal sulcus) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:998") AnnotationAssertion(Annotation( "BIRNLEX:998") "anterior middle temporal sulcus") AnnotationAssertion(Annotation( "BIRNLEX:998") Annotation( ) "anterior middle temporal sulcus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0027113") AnnotationAssertion(rdfs:label "anterior middle temporal sulcus") SubClassOf( ) # Class: (adrenergic system) AnnotationAssertion(Annotation( "NLXANAT:1005023") "Any molecule, protein, cell, tissue or organ that is related to epinephrine (also known as adrenaline).") AnnotationAssertion( "NLXANAT:1005023") AnnotationAssertion(Annotation( "NLXANAT:1005023") "adrenergic system") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0027221") AnnotationAssertion(rdfs:label "adrenergic system") SubClassOf(Annotation( "NIFSTD"^^xsd:string) ) # Class: (noradrenergic system) AnnotationAssertion(Annotation( "NLXANAT:1005027") "Any molecule, protein, cell, tissue or organ that is related to norepinephrine (also known as noradrenaline).") AnnotationAssertion( "NLXANAT:1005027") AnnotationAssertion(Annotation( "NLXANAT:1005027") "noradrenergic system") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0027225") AnnotationAssertion(rdfs:label "noradrenergic system") SubClassOf(Annotation( "NIFSTD"^^xsd:string) ) # Class: (obsolete cytoarchitectural part of retina) AnnotationAssertion( "NLXANAT:1005029") AnnotationAssertion(Annotation( "NLXANAT:1005029") "cytoarchitectural part of retina") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0027227") AnnotationAssertion(rdfs:label "obsolete cytoarchitectural part of retina") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (dopaminergic system) AnnotationAssertion(Annotation( "NLXANAT:100597") "Any molecule, protein, cell, tissue or organ that is related to dopamine.") AnnotationAssertion( "BTO:0003954") AnnotationAssertion( "NLXANAT:100597") AnnotationAssertion(Annotation( "NLXANAT:100597") "dopaminergic system") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0027239") AnnotationAssertion(rdfs:label "dopaminergic system") SubClassOf(Annotation( "NIFSTD"^^xsd:string) ) # Class: (obsolete matrix part of body of caudate nucleus) AnnotationAssertion( "NLXANAT:1010003") AnnotationAssertion(Annotation( "NLXANAT:1010003") "matrix part of body of caudate nucleus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0027243") AnnotationAssertion(rdfs:label "obsolete matrix part of body of caudate nucleus") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (striosomal part of body of caudate nucleus) AnnotationAssertion( "NLXANAT:1010004") AnnotationAssertion(Annotation( "NLXANAT:1010004") "striosomal part of body of caudate nucleus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0027244") AnnotationAssertion(rdfs:label "striosomal part of body of caudate nucleus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (matrix part of head of caudate nucleus) AnnotationAssertion(Annotation( "NLXANAT:1010005") "Matrix compartment located in the head of the caudate nucleus.") AnnotationAssertion( "NLXANAT:1010005") AnnotationAssertion( "matrix compartment of head of caudate nucleus") AnnotationAssertion(Annotation( "NLXANAT:1010005") "matrix part of head of caudate nucleus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0027245") AnnotationAssertion(rdfs:label "matrix part of head of caudate nucleus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (matrix part of tail of caudate nucleus) AnnotationAssertion(Annotation( "NLXANAT:1010006") "Matrix compartment located in the tail of the caudate nucleus.") AnnotationAssertion( "NLXANAT:1010006") AnnotationAssertion( "matrix compartment of tail of caudate nucleus") AnnotationAssertion(Annotation( "NLXANAT:1010006") "matrix part of tail of caudate nucleus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0027246") AnnotationAssertion(rdfs:label "matrix part of tail of caudate nucleus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete striosomal part of tail of caudate nucleus) AnnotationAssertion( "NLXANAT:1010007") AnnotationAssertion(Annotation( "NLXANAT:1010007") "striosomal part of tail of caudate nucleus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0027247") AnnotationAssertion(rdfs:label "obsolete striosomal part of tail of caudate nucleus") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (paravermis lobule area) AnnotationAssertion( "consider merging") AnnotationAssertion( "DHBA:12384") AnnotationAssertion( "NLXANAT:20081214") AnnotationAssertion(Annotation( "DHBA:12384") "paravermis of cerebellum") AnnotationAssertion(Annotation( "NLXANAT:20081214") "regional parts of the paravermal lobules") AnnotationAssertion(Annotation( "NLXANAT:20081214") Annotation( ) "regional parts of the paravermal lobules") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0027285") AnnotationAssertion(rdfs:label "paravermis lobule area") SubClassOf( ) SubClassOf(Annotation( "NIFSTD"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (paravermis of the posterior lobe of the cerebellum) AnnotationAssertion( "DHBA:12386") AnnotationAssertion( "NLXANAT:20081238") AnnotationAssertion(Annotation( "NLXANAT:20081238") "paravermis of the posterior lobe of the cerebellum") AnnotationAssertion(Annotation( "NLXANAT:20081238") Annotation( ) "paravermis of the posterior lobe of the cerebellum") AnnotationAssertion(Annotation( "DHBA:12386") "paravermis, posterior lobe portion") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0027309") AnnotationAssertion(rdfs:label "paravermis of the posterior lobe of the cerebellum") SubClassOf(Annotation( "NIFSTD"^^xsd:string) ) # Class: (paravermis of the anterior lobe of the cerebellum) AnnotationAssertion( "DHBA:12385") AnnotationAssertion( "NLXANAT:20081239") AnnotationAssertion(Annotation( "NLXANAT:20081239") "paravermis of the anterior lobe of the cerebellum") AnnotationAssertion(Annotation( "NLXANAT:20081239") Annotation( ) "paravermis of the anterior lobe of the cerebellum") AnnotationAssertion(Annotation( "DHBA:12385") "paravermis, anterior lobe portion") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0027310") AnnotationAssertion(rdfs:label "paravermis of the anterior lobe of the cerebellum") SubClassOf(Annotation( "NIFSTD"^^xsd:string) ) # Class: (obsolete regional Parts of the Interpositus Nucleus) AnnotationAssertion( "NLXANAT:20081243") AnnotationAssertion(Annotation( "NLXANAT:20081243") "regional parts of the interpositus nucleus") AnnotationAssertion(Annotation( "NLXANAT:20081243") Annotation( ) "regional parts of the interpositus nucleus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0027314") AnnotationAssertion(rdfs:label "obsolete regional Parts of the Interpositus Nucleus") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (flocculonodular lobe, hemisphere portion) AnnotationAssertion( "NLXANAT:20081260") AnnotationAssertion(Annotation( "NLXANAT:20081260") Annotation( ) "hemispheric part of the flocculonodular lobe of the cerebellum") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0027331") AnnotationAssertion(rdfs:label "flocculonodular lobe, hemisphere portion") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (arbor vitae) AnnotationAssertion(Annotation( "NLXANAT:20090101") "The white matter contained within the cerebellum, lying deep to the granule cell layer in the cerebellar cortex, excluding the parts of the cerebellar peduncles that extend outside of the cerebellum. The deep cerebellar nuclei are embedded within the arbor vitae.") AnnotationAssertion( ) AnnotationAssertion( "NLXANAT:20090101") AnnotationAssertion(Annotation( "NLXANAT:20090101") "arbor vitae") AnnotationAssertion(Annotation( "NLXANAT:20090101") Annotation( ) "arbor vitae") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0027333") AnnotationAssertion(rdfs:label "arbor vitae") SubClassOf( ) # Class: (obsolete regional part of supraoptic nucleus) AnnotationAssertion( "NLXANAT:20090309") AnnotationAssertion(Annotation( "NLXANAT:20090309") "regional part of supraoptic nucleus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0027352") AnnotationAssertion(rdfs:label "obsolete regional part of supraoptic nucleus") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (matrix compartment) AnnotationAssertion(Annotation( "NLXANAT:20090503") "The larger of two chemoarchitectural compartments identified in the neostriatum through differential staining for various biochemical markers. It usually is identified through differentially high staining for acetylcholinesterase and calbinin D28K.") AnnotationAssertion( "NLXANAT:20090503") AnnotationAssertion(Annotation( "NLXANAT:20090503") "matrix compartment") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NLXANAT:20090503") "matrix") AnnotationAssertion( "UBERON:0027368") AnnotationAssertion(rdfs:label "matrix compartment") SubClassOf(Annotation( "NIFSTD"^^xsd:string) ) # Class: (striosome) AnnotationAssertion(Annotation( "NLXANAT:20090506") "One of two compartments identified in the neostriatum, particularly the caudate nucleus, on the basis of differential staining for several biochemical markers such as acetylcholinesterase and calbindin. In individual sections, the striosomes appear as small patches of differentially high or low staining activity. In three dimensions, they form a 3D labyrinth extending throughout the caudate nucleus and in the putamen.") AnnotationAssertion( "NLXANAT:20090506") AnnotationAssertion(Annotation( "NLXANAT:20090506") "striosomal compartment") AnnotationAssertion(Annotation( "NLXANAT:20090506") "striosome") AnnotationAssertion( "uberon") AnnotationAssertion( "striosomal part") AnnotationAssertion( "UBERON:0027371") AnnotationAssertion(rdfs:label "striosome") SubClassOf(Annotation( "NIFSTD"^^xsd:string) ) # Class: (obsolete cytoarchitectural part of dorsal cochlear nucleus) AnnotationAssertion( "NLXANAT:20090511") AnnotationAssertion(Annotation( "NLXANAT:20090511") "cytoarchitectural part of dorsal cochlear nucleus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NLXANAT:20090511") "granule cell layer of dcn") AnnotationAssertion(Annotation( "NLXANAT:20090511") "granule cell layer of dorsal cochlear nucleus") AnnotationAssertion( "UBERON:0027376") AnnotationAssertion(rdfs:label "obsolete cytoarchitectural part of dorsal cochlear nucleus") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete predominantly gray regional part of dentate nucleus) AnnotationAssertion( "BIRNLEX:1034") AnnotationAssertion(Annotation( "BIRNLEX:1034") "predominantly gray regional part of dentate nucleus") AnnotationAssertion(Annotation( "BIRNLEX:1034") Annotation( ) "predominantly gray regional part of dentate nucleus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0027417") AnnotationAssertion(rdfs:label "obsolete predominantly gray regional part of dentate nucleus") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete predominantly gray regional part of pontine reticular formation) AnnotationAssertion( "BIRNLEX:1071") AnnotationAssertion(Annotation( "BIRNLEX:1071") Annotation( ) "predominantly gray regional part of pontine reticular formation") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0027453") AnnotationAssertion(rdfs:label "obsolete predominantly gray regional part of pontine reticular formation") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (posterior superior frontal sulcus) AnnotationAssertion( "BIRNLEX:1130") AnnotationAssertion(Annotation( "BIRNLEX:1130") "posterior superior frontal sulcus") AnnotationAssertion(Annotation( "BIRNLEX:1130") Annotation( ) "posterior superior frontal sulcus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0027513") AnnotationAssertion(rdfs:label "posterior superior frontal sulcus") SubClassOf( ) SubClassOf(Annotation( "NIFSTD"^^xsd:string) ObjectSomeValuesFrom( )) DisjointClasses(Annotation( "lexical"^^xsd:string) ) # Class: (obsolete predominantly gray regional part of dentate gyrus) AnnotationAssertion( "BIRNLEX:1183") AnnotationAssertion(Annotation( "BIRNLEX:1183") "predominantly gray regional part of dentate gyrus") AnnotationAssertion(Annotation( "BIRNLEX:1183") Annotation( ) "predominantly gray regional part of dentate gyrus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0027563") AnnotationAssertion(rdfs:label "obsolete predominantly gray regional part of dentate gyrus") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete regional part of caudate nucleus) AnnotationAssertion( "BIRNLEX:1205") AnnotationAssertion(Annotation( "BIRNLEX:1205") "regional part of caudate nucleus") AnnotationAssertion(Annotation( "BIRNLEX:1205") Annotation( ) "regional part of caudate nucleus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0027584") AnnotationAssertion(rdfs:label "obsolete regional part of caudate nucleus") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete predominantly gray regional part of neostriatum) AnnotationAssertion( "BIRNLEX:1221") AnnotationAssertion(Annotation( "BIRNLEX:1221") "predominantly gray regional part of neostriatum") AnnotationAssertion(Annotation( "BIRNLEX:1221") Annotation( ) "predominantly gray regional part of neostriatum") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0027600") AnnotationAssertion(rdfs:label "obsolete predominantly gray regional part of neostriatum") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete regional part of globus pallidus) AnnotationAssertion( "BIRNLEX:1224") AnnotationAssertion(Annotation( "BIRNLEX:1224") "regional part of globus pallidus") AnnotationAssertion(Annotation( "BIRNLEX:1224") Annotation( ) "regional part of globus pallidus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0027603") AnnotationAssertion(rdfs:label "obsolete regional part of globus pallidus") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete predominantly gray regional part of ventral nuclear group) AnnotationAssertion( "BIRNLEX:1225") AnnotationAssertion(Annotation( "BIRNLEX:1225") "predominantly gray regional part of ventral nuclear group") AnnotationAssertion(Annotation( "BIRNLEX:1225") Annotation( ) "predominantly gray regional part of ventral nuclear group") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0027604") AnnotationAssertion(rdfs:label "obsolete predominantly gray regional part of ventral nuclear group") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete predominantly gray regional part of medial dorsal nucleus) AnnotationAssertion( "BIRNLEX:1252") AnnotationAssertion(Annotation( "BIRNLEX:1252") "predominantly gray regional part of medial dorsal nucleus") AnnotationAssertion(Annotation( "BIRNLEX:1252") Annotation( ) "predominantly gray regional part of medial dorsal nucleus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0027631") AnnotationAssertion(rdfs:label "obsolete predominantly gray regional part of medial dorsal nucleus") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete regional part of lateral ventricle) AnnotationAssertion( "BIRNLEX:1270") AnnotationAssertion(Annotation( "BIRNLEX:1270") Annotation( ) "regional part of lateral ventricle") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0027649") AnnotationAssertion(rdfs:label "obsolete regional part of lateral ventricle") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete predominantly gray regional part of median eminence) AnnotationAssertion( "BIRNLEX:1272") AnnotationAssertion(Annotation( "BIRNLEX:1272") "predominantly gray regional part of median eminence") AnnotationAssertion(Annotation( "BIRNLEX:1272") Annotation( ) "predominantly gray regional part of median eminence") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0027651") AnnotationAssertion(rdfs:label "obsolete predominantly gray regional part of median eminence") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete predominantly gray regional part of metathalamus) AnnotationAssertion( "BIRNLEX:1286") AnnotationAssertion(Annotation( "BIRNLEX:1286") "predominantly gray regional part of metathalamus") AnnotationAssertion(Annotation( "BIRNLEX:1286") Annotation( ) "predominantly gray regional part of metathalamus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0027665") AnnotationAssertion(rdfs:label "obsolete predominantly gray regional part of metathalamus") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete predominantly white dorsal regional part of metathalamus) AnnotationAssertion( "BIRNLEX:1308") AnnotationAssertion(Annotation( "BIRNLEX:1308") "predominantly white dorsal regional part of metathalamus") AnnotationAssertion(Annotation( "BIRNLEX:1308") Annotation( ) "predominantly white dorsal regional part of metathalamus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0027687") AnnotationAssertion(rdfs:label "obsolete predominantly white dorsal regional part of metathalamus") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (anterior superior frontal sulcus) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:1338") AnnotationAssertion(Annotation( "BIRNLEX:1338") "anterior superior frontal sulcus") AnnotationAssertion(Annotation( "BIRNLEX:1338") Annotation( ) "anterior superior frontal sulcus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:838") "anterior superior frontal sulcus") AnnotationAssertion(Annotation( "NeuroNames:838") "polar notch") AnnotationAssertion(Annotation( "NeuroNames:838") Annotation( ) "sulcus frontalis superior anterior") AnnotationAssertion( "UBERON:0027716") AnnotationAssertion(rdfs:label "anterior superior frontal sulcus") SubClassOf( ) SubClassOf(Annotation( "NIFSTD"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (obsolete predominantly gray regional part of anterior nuclear group) AnnotationAssertion( "BIRNLEX:1350") AnnotationAssertion(Annotation( "BIRNLEX:1350") "predominantly gray regional part of anterior nuclear group") AnnotationAssertion(Annotation( "BIRNLEX:1350") Annotation( ) "predominantly gray regional part of anterior nuclear group") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0027728") AnnotationAssertion(rdfs:label "obsolete predominantly gray regional part of anterior nuclear group") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete predominantly gray regional part of superior olivary complex) AnnotationAssertion( "BIRNLEX:1370") AnnotationAssertion(Annotation( "BIRNLEX:1370") "predominantly gray regional part of superior olivary complex") AnnotationAssertion(Annotation( "BIRNLEX:1370") Annotation( ) "predominantly gray regional part of superior olivary complex") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0027748") AnnotationAssertion(rdfs:label "obsolete predominantly gray regional part of superior olivary complex") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete predominantly white regional part of superior olivary complex) AnnotationAssertion( "BIRNLEX:1377") AnnotationAssertion(Annotation( "BIRNLEX:1377") "predominantly white regional part of superior olivary complex") AnnotationAssertion(Annotation( "BIRNLEX:1377") Annotation( ) "predominantly white regional part of superior olivary complex") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0027755") AnnotationAssertion(rdfs:label "obsolete predominantly white regional part of superior olivary complex") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete regional part of paraventricular nucleus of hypothalamus magnocellular division) AnnotationAssertion( "BIRNLEX:1380") AnnotationAssertion(Annotation( "BIRNLEX:1380") Annotation( ) "regional part of paraventricular nucleus of hypothalamus magnocellular division") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0027758") AnnotationAssertion(rdfs:label "obsolete regional part of paraventricular nucleus of hypothalamus magnocellular division") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete regional part of superior olive) AnnotationAssertion( "BIRNLEX:1382") AnnotationAssertion(Annotation( "BIRNLEX:1382") Annotation( ) "regional part of superior olive") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0027760") AnnotationAssertion(rdfs:label "obsolete regional part of superior olive") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (suprachiasmatic nucleus dorsomedial part) AnnotationAssertion( "BIRNLEX:1390") AnnotationAssertion( "HBA:4591") AnnotationAssertion(Annotation( "BIRNLEX:1390") "suprachiasmatic nucleus dorsomedial part") AnnotationAssertion(Annotation( "BIRNLEX:1390") Annotation( ) "suprachiasmatic nucleus dorsomedial part") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0027768") AnnotationAssertion(rdfs:label "suprachiasmatic nucleus dorsomedial part") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (suprachiasmatic nucleus ventrolateral part) AnnotationAssertion( "BIRNLEX:1393") AnnotationAssertion( "HBA:4592") AnnotationAssertion(Annotation( "BIRNLEX:1393") "suprachiasmatic nucleus ventrolateral part") AnnotationAssertion(Annotation( "BIRNLEX:1393") Annotation( ) "suprachiasmatic nucleus ventrolateral part") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0027771") AnnotationAssertion(rdfs:label "suprachiasmatic nucleus ventrolateral part") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete regional part of thoracic spinal cord dorsal horn) AnnotationAssertion( "BIRNLEX:1417") AnnotationAssertion(Annotation( "BIRNLEX:1417") "regional part of thoracic spinal cord dorsal horn") AnnotationAssertion(Annotation( "BIRNLEX:1417") Annotation( ) "regional part of thoracic spinal cord dorsal horn") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0027796") AnnotationAssertion(rdfs:label "obsolete regional part of thoracic spinal cord dorsal horn") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete regional part of paraventricular nucleus of hypothalamus descending division) AnnotationAssertion( "BIRNLEX:1435") AnnotationAssertion(Annotation( "BIRNLEX:1435") "regional part of paraventricular nucleus of hypothalamus descending division") AnnotationAssertion(Annotation( "BIRNLEX:1435") Annotation( ) "regional part of paraventricular nucleus of hypothalamus descending division") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0027814") AnnotationAssertion(rdfs:label "obsolete regional part of paraventricular nucleus of hypothalamus descending division") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete predominantly gray regional part of hippocampal formation) AnnotationAssertion( "BIRNLEX:1449") AnnotationAssertion(Annotation( "BIRNLEX:1449") "predominantly gray regional part of hippocampal formation") AnnotationAssertion(Annotation( "BIRNLEX:1449") Annotation( ) "predominantly gray regional part of hippocampal formation") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0027828") AnnotationAssertion(rdfs:label "obsolete predominantly gray regional part of hippocampal formation") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete regional part of sacral spinal cord gray matter) AnnotationAssertion( "BIRNLEX:1495") AnnotationAssertion(Annotation( "BIRNLEX:1495") "regional part of sacral spinal cord gray matter") AnnotationAssertion(Annotation( "BIRNLEX:1495") Annotation( ) "regional part of sacral spinal cord gray matter") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0027874") AnnotationAssertion(rdfs:label "obsolete regional part of sacral spinal cord gray matter") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete regional part of lumbar spinal cord gray matter) AnnotationAssertion( "BIRNLEX:1631") AnnotationAssertion(Annotation( "BIRNLEX:1631") "regional part of lumbar spinal cord gray matter") AnnotationAssertion(Annotation( "BIRNLEX:1631") Annotation( ) "regional part of lumbar spinal cord gray matter") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0028010") AnnotationAssertion(rdfs:label "obsolete regional part of lumbar spinal cord gray matter") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete regional part of cervical spinal cord dorsal horn) AnnotationAssertion( "BIRNLEX:1703") AnnotationAssertion(Annotation( "BIRNLEX:1703") "regional part of cervical spinal cord dorsal horn") AnnotationAssertion(Annotation( "BIRNLEX:1703") Annotation( ) "regional part of cervical spinal cord dorsal horn") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0028079") AnnotationAssertion(rdfs:label "obsolete regional part of cervical spinal cord dorsal horn") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete regional part of spiral organ of Corti) AnnotationAssertion( "BIRNLEX:2530") AnnotationAssertion(Annotation( "BIRNLEX:2530") "regional part of spiral organ of corti") AnnotationAssertion(Annotation( "BIRNLEX:2530") Annotation( ) "regional part of spiral organ of corti") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0028192") AnnotationAssertion(rdfs:label "obsolete regional part of spiral organ of Corti") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (spiral prominence of cochlear duct) AnnotationAssertion(Annotation( ) "A projecting portion of the spiral ligament of the cochlea, bounding the lower edge of the stria vascularis and containing within it a blood vessel, the vas prominens.") AnnotationAssertion(Annotation( "EMAPA:35799") Annotation( "MA:0003003") "spiral prominence") AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:2532") AnnotationAssertion( "EMAPA:35799") AnnotationAssertion( "FMA:77833") AnnotationAssertion( "MA:0003003") AnnotationAssertion(Annotation( ) Annotation( ) "prominentia spiralis ductus cochlearis") AnnotationAssertion(Annotation( "BIRNLEX:2532") "spiral prominence of cochlea") AnnotationAssertion(Annotation( "BIRNLEX:2532") Annotation( ) "spiral prominence of cochlea") AnnotationAssertion(Annotation( "FMA:77833") "spiral prominence of cochlear duct") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0028194") AnnotationAssertion(rdfs:label "spiral prominence of cochlear duct") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "MA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (obsolete regional part of fovea) AnnotationAssertion( "BIRNLEX:2545") AnnotationAssertion(Annotation( "BIRNLEX:2545") "regional part of fovea") AnnotationAssertion(Annotation( "BIRNLEX:2545") Annotation( ) "regional part of fovea") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0028200") AnnotationAssertion(rdfs:label "obsolete regional part of fovea") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete regional part of vestibular ganglion) AnnotationAssertion( "BIRNLEX:2550") AnnotationAssertion(Annotation( "BIRNLEX:2550") "regional part of vestibular ganglion") AnnotationAssertion(Annotation( "BIRNLEX:2550") Annotation( ) "regional part of vestibular ganglion") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0028205") AnnotationAssertion(rdfs:label "obsolete regional part of vestibular ganglion") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete predominantly gray regional part of amygdala) AnnotationAssertion( "BIRNLEX:2681") AnnotationAssertion(Annotation( "BIRNLEX:2681") "predominantly gray regional part of amygdala") AnnotationAssertion(Annotation( "BIRNLEX:2681") Annotation( ) "predominantly gray regional part of amygdala") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0028314") AnnotationAssertion(rdfs:label "obsolete predominantly gray regional part of amygdala") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete predominantly gray part of basolateral nuclear complex) AnnotationAssertion( "BIRNLEX:2684") AnnotationAssertion(Annotation( "BIRNLEX:2684") "predominantly gray part of basolateral nuclear complex") AnnotationAssertion(Annotation( "BIRNLEX:2684") Annotation( ) "predominantly gray part of basolateral nuclear complex") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0028317") AnnotationAssertion(rdfs:label "obsolete predominantly gray part of basolateral nuclear complex") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete regional part of basal amygdaloid nucleus) AnnotationAssertion( "BIRNLEX:2693") AnnotationAssertion(Annotation( "BIRNLEX:2693") "regional part of basal amygdaloid nucleus") AnnotationAssertion(Annotation( "BIRNLEX:2693") Annotation( ) "regional part of basal amygdaloid nucleus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0028326") AnnotationAssertion(rdfs:label "obsolete regional part of basal amygdaloid nucleus") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete regional part of entorhinal cortex) AnnotationAssertion( "BIRNLEX:2704") AnnotationAssertion(Annotation( "BIRNLEX:2704") Annotation( ) "regional part of entorhinal cortex") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0028337") AnnotationAssertion(rdfs:label "obsolete regional part of entorhinal cortex") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (calcarine sulcus (dorsal)) AnnotationAssertion( "BIRNLEX:4050") AnnotationAssertion(Annotation( "BIRNLEX:4050") "calcarine sulcus (dorsal)") AnnotationAssertion(Annotation( "BIRNLEX:4050") Annotation( ) "calcarine sulcus (dorsal)") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0028395") AnnotationAssertion(rdfs:label "calcarine sulcus (dorsal)") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (calcarine sulcus (ventral)) AnnotationAssertion( "BIRNLEX:4051") AnnotationAssertion(Annotation( "BIRNLEX:4051") "calcarine sulcus (ventral)") AnnotationAssertion(Annotation( "BIRNLEX:4051") Annotation( ) "calcarine sulcus (ventral)") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0028396") AnnotationAssertion(rdfs:label "calcarine sulcus (ventral)") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (Hadjikhani et al. (1998) visuotopic area V1d) AnnotationAssertion( "BIRNLEX:4053") AnnotationAssertion(Annotation( "BIRNLEX:4053") "Hadjikhani et al. (1998) visuotopic area v1d") AnnotationAssertion(Annotation( "BIRNLEX:4053") Annotation( ) "Hadjikhani et al. (1998) visuotopic area v1d") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0028398") AnnotationAssertion(rdfs:label "Hadjikhani et al. (1998) visuotopic area V1d") SubClassOf(Annotation( "NIFSTD"^^xsd:string) ) # Class: (Hadjikhani et al. (1998) visuotopic area V1v) AnnotationAssertion( "BIRNLEX:4054") AnnotationAssertion(Annotation( "BIRNLEX:4054") "Hadjikhani et al. (1998) visuotopic area v1v") AnnotationAssertion(Annotation( "BIRNLEX:4054") Annotation( ) "Hadjikhani et al. (1998) visuotopic area v1v") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0028399") AnnotationAssertion(rdfs:label "Hadjikhani et al. (1998) visuotopic area V1v") SubClassOf(Annotation( "NIFSTD"^^xsd:string) ) # Class: (Hadjikhani et al. (1998) visuotopic area V2v) AnnotationAssertion( "BIRNLEX:4056") AnnotationAssertion(Annotation( "BIRNLEX:4056") "Hadjikhani et al. (1998) visuotopic area v2v") AnnotationAssertion(Annotation( "BIRNLEX:4056") Annotation( ) "Hadjikhani et al. (1998) visuotopic area v2v") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0028401") AnnotationAssertion(rdfs:label "Hadjikhani et al. (1998) visuotopic area V2v") SubClassOf(Annotation( "NIFSTD"^^xsd:string) ) # Class: (Hadjikhani et al. (1998) visuotopic area V3) AnnotationAssertion( "BIRNLEX:4057") AnnotationAssertion(Annotation( "BIRNLEX:4057") "Hadjikhani et al. (1998) visuotopic area v3") AnnotationAssertion(Annotation( "BIRNLEX:4057") Annotation( ) "Hadjikhani et al. (1998) visuotopic area v3") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0028402") AnnotationAssertion(rdfs:label "Hadjikhani et al. (1998) visuotopic area V3") SubClassOf(Annotation( "NIFSTD"^^xsd:string) ) # Class: (Hadjikhani et al. (1998) visuotopic area V3A) AnnotationAssertion( "BIRNLEX:4058") AnnotationAssertion(Annotation( "BIRNLEX:4058") "Hadjikhani et al. (1998) visuotopic area v3a") AnnotationAssertion(Annotation( "BIRNLEX:4058") Annotation( ) "Hadjikhani et al. (1998) visuotopic area v3a") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0028403") AnnotationAssertion(rdfs:label "Hadjikhani et al. (1998) visuotopic area V3A") SubClassOf(Annotation( "NIFSTD"^^xsd:string) ) # Class: (Hadjikhani et al. (1998) visuotopic area VP) AnnotationAssertion( "BIRNLEX:4059") AnnotationAssertion(Annotation( "BIRNLEX:4059") "Hadjikhani et al. (1998) visuotopic area vp") AnnotationAssertion(Annotation( "BIRNLEX:4059") Annotation( ) "Hadjikhani et al. (1998) visuotopic area vp") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0028404") AnnotationAssertion(rdfs:label "Hadjikhani et al. (1998) visuotopic area VP") SubClassOf(Annotation( "NIFSTD"^^xsd:string) ) # Class: (Hadjikhani et al. (1998) visuotopic area V4v) AnnotationAssertion( "BIRNLEX:4060") AnnotationAssertion(Annotation( "BIRNLEX:4060") "Hadjikhani et al. (1998) visuotopic area v4v") AnnotationAssertion(Annotation( "BIRNLEX:4060") Annotation( ) "Hadjikhani et al. (1998) visuotopic area v4v") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0028405") AnnotationAssertion(rdfs:label "Hadjikhani et al. (1998) visuotopic area V4v") SubClassOf(Annotation( "NIFSTD"^^xsd:string) ) # Class: (Hadjikhani et al. (1998) visuotopic area V8) AnnotationAssertion( "BIRNLEX:4061") AnnotationAssertion(Annotation( "BIRNLEX:4061") "Hadjikhani et al. (1998) visuotopic area v8") AnnotationAssertion(Annotation( "BIRNLEX:4061") Annotation( ) "Hadjikhani et al. (1998) visuotopic area v8") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0028406") AnnotationAssertion(rdfs:label "Hadjikhani et al. (1998) visuotopic area V8") SubClassOf(Annotation( "NIFSTD"^^xsd:string) ) # Class: (Ongur, Price, and Ferry (2003) area 10p) AnnotationAssertion( "BIRNLEX:4067") AnnotationAssertion(Annotation( "BIRNLEX:4067") "ongur, price, and ferry (2003) area 10p") AnnotationAssertion(Annotation( "BIRNLEX:4067") Annotation( ) "ongur, price, and ferry (2003) area 10p") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0028412") AnnotationAssertion(rdfs:label "Ongur, Price, and Ferry (2003) area 10p") SubClassOf(Annotation( "NIFSTD"^^xsd:string) ) # Class: (Ongur, Price, and Ferry (2003) area 10r) AnnotationAssertion( "BIRNLEX:4068") AnnotationAssertion(Annotation( "BIRNLEX:4068") "ongur, price, and ferry (2003) area 10r") AnnotationAssertion(Annotation( "BIRNLEX:4068") Annotation( ) "ongur, price, and ferry (2003) area 10r") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0028413") AnnotationAssertion(rdfs:label "Ongur, Price, and Ferry (2003) area 10r") SubClassOf(Annotation( "NIFSTD"^^xsd:string) ) # Class: (Ongur, Price, and Ferry (2003) area 10o) AnnotationAssertion( "BIRNLEX:4069") AnnotationAssertion(Annotation( "BIRNLEX:4069") "ongur, price, and ferry (2003) area 10o") AnnotationAssertion(Annotation( "BIRNLEX:4069") Annotation( ) "ongur, price, and ferry (2003) area 10o") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0028414") AnnotationAssertion(rdfs:label "Ongur, Price, and Ferry (2003) area 10o") SubClassOf(Annotation( "NIFSTD"^^xsd:string) ) # Class: (Ongur, Price, and Ferry (2003) area 10m) AnnotationAssertion(Annotation( "BIRNLEX:4070") "Area 10m is a cortical area in the frontal lobe defined on multiple architectonic criteria.") AnnotationAssertion( "BIRNLEX:4070") AnnotationAssertion(Annotation( "BIRNLEX:4070") "ongur, price, and ferry (2003) area 10m") AnnotationAssertion(Annotation( "BIRNLEX:4070") Annotation( ) "ongur, price, and ferry (2003) area 10m") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0028415") AnnotationAssertion(rdfs:label "Ongur, Price, and Ferry (2003) area 10m") SubClassOf(Annotation( "NIFSTD"^^xsd:string) ) # Class: (Ongur, Price, and Ferry (2003) area 11m) AnnotationAssertion( "BIRNLEX:4071") AnnotationAssertion(Annotation( "BIRNLEX:4071") "ongur, price, and ferry (2003) area 11m") AnnotationAssertion(Annotation( "BIRNLEX:4071") Annotation( ) "ongur, price, and ferry (2003) area 11m") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0028416") AnnotationAssertion(rdfs:label "Ongur, Price, and Ferry (2003) area 11m") SubClassOf(Annotation( "NIFSTD"^^xsd:string) ) # Class: (Ongur, Price, and Ferry (2003) area 47s) AnnotationAssertion( "BIRNLEX:4072") AnnotationAssertion(Annotation( "BIRNLEX:4072") "ongur, price, and ferry (2003) area 47s") AnnotationAssertion(Annotation( "BIRNLEX:4072") Annotation( ) "ongur, price, and ferry (2003) area 47s") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0028417") AnnotationAssertion(rdfs:label "Ongur, Price, and Ferry (2003) area 47s") SubClassOf(Annotation( "NIFSTD"^^xsd:string) ) # Class: (Ongur, Price, and Ferry (2003) area 13b) AnnotationAssertion( "BIRNLEX:4073") AnnotationAssertion(Annotation( "BIRNLEX:4073") "ongur, price, and ferry (2003) area 13b") AnnotationAssertion(Annotation( "BIRNLEX:4073") Annotation( ) "ongur, price, and ferry (2003) area 13b") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0028418") AnnotationAssertion(rdfs:label "Ongur, Price, and Ferry (2003) area 13b") SubClassOf(Annotation( "NIFSTD"^^xsd:string) ) # Class: (Ongur, Price, and Ferry (2003) area 13a) AnnotationAssertion( "BIRNLEX:4074") AnnotationAssertion(Annotation( "BIRNLEX:4074") "ongur, price, and ferry (2003) area 13a") AnnotationAssertion(Annotation( "BIRNLEX:4074") Annotation( ) "ongur, price, and ferry (2003) area 13a") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0028419") AnnotationAssertion(rdfs:label "Ongur, Price, and Ferry (2003) area 13a") SubClassOf(Annotation( "NIFSTD"^^xsd:string) ) # Class: (Ongur, Price, and Ferry (2003) area 14r) AnnotationAssertion( "BIRNLEX:4075") AnnotationAssertion(Annotation( "BIRNLEX:4075") "ongur, price, and ferry (2003) area 14r") AnnotationAssertion(Annotation( "BIRNLEX:4075") Annotation( ) "ongur, price, and ferry (2003) area 14r") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0028420") AnnotationAssertion(rdfs:label "Ongur, Price, and Ferry (2003) area 14r") SubClassOf(Annotation( "NIFSTD"^^xsd:string) ) # Class: (Ongur, Price, and Ferry (2003) area 14c) AnnotationAssertion( "BIRNLEX:4076") AnnotationAssertion(Annotation( "BIRNLEX:4076") "ongur, price, and ferry (2003) area 14c") AnnotationAssertion(Annotation( "BIRNLEX:4076") Annotation( ) "ongur, price, and ferry (2003) area 14c") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0028421") AnnotationAssertion(rdfs:label "Ongur, Price, and Ferry (2003) area 14c") SubClassOf(Annotation( "NIFSTD"^^xsd:string) ) # Class: (Ongur, Price, and Ferry (2003) area 24) AnnotationAssertion( "BIRNLEX:4077") AnnotationAssertion(Annotation( "BIRNLEX:4077") "ongur, price, and ferry (2003) area 24") AnnotationAssertion(Annotation( "BIRNLEX:4077") Annotation( ) "ongur, price, and ferry (2003) area 24") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0028422") AnnotationAssertion(rdfs:label "Ongur, Price, and Ferry (2003) area 24") SubClassOf(Annotation( "NIFSTD"^^xsd:string) ) # Class: (Ongur, Price, and Ferry (2003) area 25) AnnotationAssertion( "BIRNLEX:4078") AnnotationAssertion(Annotation( "BIRNLEX:4078") "ongur, price, and ferry (2003) area 25") AnnotationAssertion(Annotation( "BIRNLEX:4078") Annotation( ) "ongur, price, and ferry (2003) area 25") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0028423") AnnotationAssertion(rdfs:label "Ongur, Price, and Ferry (2003) area 25") SubClassOf(Annotation( "NIFSTD"^^xsd:string) ) # Class: (Ongur, Price, and Ferry (2003) area 32) AnnotationAssertion( "BIRNLEX:4079") AnnotationAssertion(Annotation( "BIRNLEX:4079") "ongur, price, and ferry (2003) area 32") AnnotationAssertion(Annotation( "BIRNLEX:4079") Annotation( ) "ongur, price, and ferry (2003) area 32") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0028424") AnnotationAssertion(rdfs:label "Ongur, Price, and Ferry (2003) area 32") SubClassOf(Annotation( "NIFSTD"^^xsd:string) ) # Class: (Ongur, Price, and Ferry (2003) area G) AnnotationAssertion( "BIRNLEX:4080") AnnotationAssertion(Annotation( "BIRNLEX:4080") "ongur, price, and ferry (2003) area g") AnnotationAssertion(Annotation( "BIRNLEX:4080") Annotation( ) "ongur, price, and ferry (2003) area g") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0028425") AnnotationAssertion(rdfs:label "Ongur, Price, and Ferry (2003) area G") SubClassOf(Annotation( "NIFSTD"^^xsd:string) ) # Class: (Ongur, Price, and Ferry (2003) area PrCO) AnnotationAssertion( "UBERON:0028438") AnnotationAssertion( "BIRNLEX:4081") AnnotationAssertion( "BIRNLEX:4093") AnnotationAssertion(Annotation( "BIRNLEX:4081") "ongur, price, and ferry (2003) area prco") AnnotationAssertion(Annotation( "BIRNLEX:4081") Annotation( ) "ongur, price, and ferry (2003) area prco") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0028426") AnnotationAssertion(rdfs:label "Ongur, Price, and Ferry (2003) area PrCO") SubClassOf(Annotation( "NIFSTD"^^xsd:string) ) # Class: (Ongur, Price, and Ferry (2003) area 11l) AnnotationAssertion( "BIRNLEX:4082") AnnotationAssertion(Annotation( "BIRNLEX:4082") "ongur, price, and ferry (2003) area 11l") AnnotationAssertion(Annotation( "BIRNLEX:4082") Annotation( ) "ongur, price, and ferry (2003) area 11l") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0028427") AnnotationAssertion(rdfs:label "Ongur, Price, and Ferry (2003) area 11l") SubClassOf(Annotation( "NIFSTD"^^xsd:string) ) # Class: (Ongur, Price, and Ferry (2003) area 13m) AnnotationAssertion( "BIRNLEX:4083") AnnotationAssertion(Annotation( "BIRNLEX:4083") "ongur, price, and ferry (2003) area 13m") AnnotationAssertion(Annotation( "BIRNLEX:4083") Annotation( ) "ongur, price, and ferry (2003) area 13m") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0028428") AnnotationAssertion(rdfs:label "Ongur, Price, and Ferry (2003) area 13m") SubClassOf(Annotation( "NIFSTD"^^xsd:string) ) # Class: (Ongur, Price, and Ferry (2003) area 13l) AnnotationAssertion( "BIRNLEX:4084") AnnotationAssertion(Annotation( "BIRNLEX:4084") "ongur, price, and ferry (2003) area 13l") AnnotationAssertion(Annotation( "BIRNLEX:4084") Annotation( ) "ongur, price, and ferry (2003) area 13l") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0028429") AnnotationAssertion(rdfs:label "Ongur, Price, and Ferry (2003) area 13l") SubClassOf(Annotation( "NIFSTD"^^xsd:string) ) # Class: (Ongur, Price, and Ferry (2003) area 47l) AnnotationAssertion( "BIRNLEX:4085") AnnotationAssertion(Annotation( "BIRNLEX:4085") "ongur, price, and ferry (2003) area 47l") AnnotationAssertion(Annotation( "BIRNLEX:4085") Annotation( ) "ongur, price, and ferry (2003) area 47l") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0028430") AnnotationAssertion(rdfs:label "Ongur, Price, and Ferry (2003) area 47l") SubClassOf(Annotation( "NIFSTD"^^xsd:string) ) # Class: (Ongur, Price, and Ferry (2003) area 47m) AnnotationAssertion( "BIRNLEX:4086") AnnotationAssertion(Annotation( "BIRNLEX:4086") "ongur, price, and ferry (2003) area 47m") AnnotationAssertion(Annotation( "BIRNLEX:4086") Annotation( ) "ongur, price, and ferry (2003) area 47m") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0028431") AnnotationAssertion(rdfs:label "Ongur, Price, and Ferry (2003) area 47m") SubClassOf(Annotation( "NIFSTD"^^xsd:string) ) # Class: (Ongur, Price, and Ferry (2003) area 47r) AnnotationAssertion( "BIRNLEX:4087") AnnotationAssertion(Annotation( "BIRNLEX:4087") "ongur, price, and ferry (2003) area 47r") AnnotationAssertion(Annotation( "BIRNLEX:4087") Annotation( ) "ongur, price, and ferry (2003) area 47r") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0028432") AnnotationAssertion(rdfs:label "Ongur, Price, and Ferry (2003) area 47r") SubClassOf(Annotation( "NIFSTD"^^xsd:string) ) # Class: (Ongur, Price, and Ferry (2003) area Iam) AnnotationAssertion( "BIRNLEX:4088") AnnotationAssertion(Annotation( "BIRNLEX:4088") "ongur, price, and ferry (2003) area iam") AnnotationAssertion(Annotation( "BIRNLEX:4088") Annotation( ) "ongur, price, and ferry (2003) area iam") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0028433") AnnotationAssertion(rdfs:label "Ongur, Price, and Ferry (2003) area Iam") SubClassOf(Annotation( "NIFSTD"^^xsd:string) ) # Class: (Ongur, Price, and Ferry (2003) area Ial) AnnotationAssertion(Annotation( "BIRNLEX:4089") "Insula agranular lateral area.") AnnotationAssertion( "BIRNLEX:4089") AnnotationAssertion(Annotation( "BIRNLEX:4089") "ongur, price, and ferry (2003) area ial") AnnotationAssertion(Annotation( "BIRNLEX:4089") Annotation( ) "ongur, price, and ferry (2003) area ial") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0028434") AnnotationAssertion(rdfs:label "Ongur, Price, and Ferry (2003) area Ial") SubClassOf(Annotation( "NIFSTD"^^xsd:string) ) # Class: (Ongur, Price, and Ferry (2003) area Iai) AnnotationAssertion( "BIRNLEX:4090") AnnotationAssertion(Annotation( "BIRNLEX:4090") "ongur, price, and ferry (2003) area iai") AnnotationAssertion(Annotation( "BIRNLEX:4090") Annotation( ) "ongur, price, and ferry (2003) area iai") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0028435") AnnotationAssertion(rdfs:label "Ongur, Price, and Ferry (2003) area Iai") SubClassOf(Annotation( "NIFSTD"^^xsd:string) ) # Class: (Ongur, Price, and Ferry (2003) area 9) AnnotationAssertion( "BIRNLEX:4091") AnnotationAssertion(Annotation( "BIRNLEX:4091") "ongur, price, and ferry (2003) area 9") AnnotationAssertion(Annotation( "BIRNLEX:4091") Annotation( ) "ongur, price, and ferry (2003) area 9") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0028436") AnnotationAssertion(rdfs:label "Ongur, Price, and Ferry (2003) area 9") SubClassOf(Annotation( "NIFSTD"^^xsd:string) ) # Class: (Ongur, Price, and Ferry (2003) area 10l) AnnotationAssertion( "BIRNLEX:4092") AnnotationAssertion(Annotation( "BIRNLEX:4092") "ongur, price, and ferry (2003) area 10l") AnnotationAssertion(Annotation( "BIRNLEX:4092") Annotation( ) "ongur, price, and ferry (2003) area 10l") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0028437") AnnotationAssertion(rdfs:label "Ongur, Price, and Ferry (2003) area 10l") SubClassOf(Annotation( "NIFSTD"^^xsd:string) ) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (Ongur, Price, and Ferry (2003) area Iapm) AnnotationAssertion( "BIRNLEX:4094") AnnotationAssertion(Annotation( "BIRNLEX:4094") Annotation( ) "ongur, price, and ferry (2003) area iapm") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0028439") AnnotationAssertion(rdfs:label "Ongur, Price, and Ferry (2003) area Iapm") SubClassOf(Annotation( "NIFSTD"^^xsd:string) ) # Class: (Ongur, Price, and Ferry (2003) area AON) AnnotationAssertion( "BIRNLEX:4095") AnnotationAssertion(Annotation( "BIRNLEX:4095") "ongur, price, and ferry (2003) area aon") AnnotationAssertion(Annotation( "BIRNLEX:4095") Annotation( ) "ongur, price, and ferry (2003) area aon") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0028440") AnnotationAssertion(rdfs:label "Ongur, Price, and Ferry (2003) area AON") SubClassOf(Annotation( "NIFSTD"^^xsd:string) ) # Class: (obsolete predominantly gray part of posterior nuclear complex) AnnotationAssertion( "BIRNLEX:772") AnnotationAssertion(Annotation( "BIRNLEX:772") "predominantly gray part of posterior nuclear complex") AnnotationAssertion(Annotation( "BIRNLEX:772") Annotation( ) "predominantly gray part of posterior nuclear complex") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0028544") AnnotationAssertion(rdfs:label "obsolete predominantly gray part of posterior nuclear complex") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete predominantly gray part of Intralaminar nuclear group) AnnotationAssertion( "BIRNLEX:852") AnnotationAssertion(Annotation( "BIRNLEX:852") Annotation( ) "predominantly gray part of intralaminar nuclear group") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0028615") AnnotationAssertion(rdfs:label "obsolete predominantly gray part of Intralaminar nuclear group") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete predominantly gray regional part of midline nuclear group) AnnotationAssertion( "BIRNLEX:854") AnnotationAssertion(Annotation( "BIRNLEX:854") "predominantly gray regional part of midline nuclear group") AnnotationAssertion(Annotation( "BIRNLEX:854") Annotation( ) "predominantly gray regional part of midline nuclear group") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0028616") AnnotationAssertion(rdfs:label "obsolete predominantly gray regional part of midline nuclear group") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (banks of superior temporal sulcus) AnnotationAssertion(Annotation( "BIRNLEX:862") "Component of the temporal lobe, lateral aspect. The rostral boundary is the superior temporal gyrus and the caudal boundary the middle temporal gyrus. Within the FreeSurfer definition, this reflects primarily the posterior aspect of the superior temporal sulcus (Christine Fennema-Notestine).") AnnotationAssertion( "BIRNLEX:862") AnnotationAssertion(Annotation( "BIRNLEX:862") "banks of superior temporal sulcus") AnnotationAssertion(Annotation( "BIRNLEX:862") Annotation( ) "banks of superior temporal sulcus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0028622") AnnotationAssertion(rdfs:label "banks of superior temporal sulcus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (caudal anterior cingulate cortex) AnnotationAssertion(Annotation( "BIRNLEX:967") "Component of the cingulate cortex. The rostral boundary was the first appearance of the genu of the corpus callosum whereas the caudal boundary was established as the first appearance of the mammillary bodies. The medial boundary was the medial aspect of the cortex. The supero-lateral boundary was the superior frontal gyrus whereas the infero-lateral boundary was the corpus callosum (Christine Fennema-Notestine).") AnnotationAssertion( "BIRNLEX:967") AnnotationAssertion(Annotation( "BIRNLEX:967") "caudal anterior cingulate cortex") AnnotationAssertion(Annotation( "BIRNLEX:967") Annotation( ) "caudal anterior cingulate cortex") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0028715") AnnotationAssertion(rdfs:label "caudal anterior cingulate cortex") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete regional part of substantia nigra pars reticulata) AnnotationAssertion( "BIRNLEX:978") AnnotationAssertion(Annotation( "BIRNLEX:978") "regional part of substantia nigra pars reticulata") AnnotationAssertion(Annotation( "BIRNLEX:978") Annotation( ) "regional part of substantia nigra pars reticulata") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0028725") AnnotationAssertion(rdfs:label "obsolete regional part of substantia nigra pars reticulata") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete predominantly gray regional part of lateral nuclear group) AnnotationAssertion( "BIRNLEX:997") AnnotationAssertion(Annotation( "BIRNLEX:997") "predominantly gray regional part of lateral nuclear group") AnnotationAssertion(Annotation( "BIRNLEX:997") Annotation( ) "predominantly gray regional part of lateral nuclear group") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0028744") AnnotationAssertion(rdfs:label "obsolete predominantly gray regional part of lateral nuclear group") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (paravermic lobule II) AnnotationAssertion( "HBA:4717") AnnotationAssertion( "NLXANAT:20081215") AnnotationAssertion(Annotation( "NLXANAT:20081215") "paravermic lobule ii") AnnotationAssertion(Annotation( "NLXANAT:20081215") Annotation( ) "paravermic lobule ii") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0028918") AnnotationAssertion(rdfs:label "paravermic lobule II") SubClassOf(Annotation( "NIFSTD"^^xsd:string) ) # Class: (paravermic lobule III) AnnotationAssertion( "HBA:4718") AnnotationAssertion( "NLXANAT:20081216") AnnotationAssertion(Annotation( "NLXANAT:20081216") "paravermic lobule iii") AnnotationAssertion(Annotation( "NLXANAT:20081216") Annotation( ) "paravermic lobule iii") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0028919") AnnotationAssertion(rdfs:label "paravermic lobule III") SubClassOf(Annotation( "NIFSTD"^^xsd:string) ) # Class: (paravermic lobule IV) AnnotationAssertion( "HBA:4719") AnnotationAssertion( "NLXANAT:20081217") AnnotationAssertion(Annotation( "NLXANAT:20081217") "paravermic lobule iv") AnnotationAssertion(Annotation( "NLXANAT:20081217") Annotation( ) "paravermic lobule iv") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0028920") AnnotationAssertion(rdfs:label "paravermic lobule IV") SubClassOf(Annotation( "NIFSTD"^^xsd:string) ) # Class: (paravermic lobule IX) AnnotationAssertion( "HBA:4728") AnnotationAssertion( "NLXANAT:20081218") AnnotationAssertion(Annotation( "NLXANAT:20081218") "paravermic lobule ix") AnnotationAssertion(Annotation( "NLXANAT:20081218") Annotation( ) "paravermic lobule ix") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NLXANAT:20081218") "ventralis") AnnotationAssertion( "UBERON:0028921") AnnotationAssertion(rdfs:label "paravermic lobule IX") SubClassOf(Annotation( "NIFSTD"^^xsd:string) ) # Class: (paravermic lobule V) AnnotationAssertion( "HBA:4720") AnnotationAssertion( "NLXANAT:20081219") AnnotationAssertion(Annotation( "NLXANAT:20081219") "paravermic lobule v") AnnotationAssertion(Annotation( "NLXANAT:20081219") Annotation( ) "paravermic lobule v") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0028922") AnnotationAssertion(rdfs:label "paravermic lobule V") SubClassOf(Annotation( "NIFSTD"^^xsd:string) ) # Class: (paravermic lobule VI) AnnotationAssertion( "HBA:4722") AnnotationAssertion( "NLXANAT:20081220") AnnotationAssertion(Annotation( "NLXANAT:20081220") "paravermic lobule vi") AnnotationAssertion(Annotation( "NLXANAT:20081220") Annotation( ) "paravermic lobule vi") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0028923") AnnotationAssertion(rdfs:label "paravermic lobule VI") SubClassOf(Annotation( "NIFSTD"^^xsd:string) ) # Class: (paravermic lobule VII) AnnotationAssertion( "NLXANAT:20081221") AnnotationAssertion(Annotation( "NLXANAT:20081221") "paravermic lobule vii") AnnotationAssertion(Annotation( "NLXANAT:20081221") Annotation( ) "paravermic lobule vii") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0028924") AnnotationAssertion(rdfs:label "paravermic lobule VII") SubClassOf(Annotation( "NIFSTD"^^xsd:string) ) # Class: (paravermic lobule VIII) AnnotationAssertion( "NLXANAT:20081222") AnnotationAssertion(Annotation( "NLXANAT:20081222") "paravermic lobule viii") AnnotationAssertion(Annotation( "NLXANAT:20081222") Annotation( ) "paravermic lobule viii") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0028925") AnnotationAssertion(rdfs:label "paravermic lobule VIII") SubClassOf(Annotation( "NIFSTD"^^xsd:string) ) # Class: (matrix compartment of caudate nucleus) AnnotationAssertion(Annotation( "NLXANAT:20090504") "Matrix compartment located in the caudate nucleus.") AnnotationAssertion( "NLXANAT:20090504") AnnotationAssertion(Annotation( "NLXANAT:20090504") "matrix compartment of caudate nucleus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0029001") AnnotationAssertion(rdfs:label "matrix compartment of caudate nucleus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (matrix compartment of putamen) AnnotationAssertion( "NLXANAT:20090505") AnnotationAssertion(Annotation( "NLXANAT:20090505") "matrix compartment of putamen") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0029002") AnnotationAssertion(rdfs:label "matrix compartment of putamen") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (striosomal part of caudate nucleus) AnnotationAssertion( "NLXANAT:20090507") AnnotationAssertion(Annotation( "NLXANAT:20090507") "striosomal part of caudate nucleus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0029004") AnnotationAssertion(rdfs:label "striosomal part of caudate nucleus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (striosomal part of putamen) AnnotationAssertion( "NLXANAT:20090508") AnnotationAssertion(Annotation( "NLXANAT:20090508") "striosomal part of putamen") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0029005") AnnotationAssertion(rdfs:label "striosomal part of putamen") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (granular cell layer of dorsal cochlear nucleus) AnnotationAssertion( "NLXANAT:20090512") AnnotationAssertion(Annotation( "NLXANAT:20090512") "granular cell layer of dorsal cochlear nucleus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0029009") AnnotationAssertion(rdfs:label "granular cell layer of dorsal cochlear nucleus") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete predominantly gray regional part of ventral lateral nucleus) AnnotationAssertion( "BIRNLEX:1124") AnnotationAssertion(Annotation( "BIRNLEX:1124") Annotation( ) "predominantly gray regional part of ventral lateral nucleus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0029140") AnnotationAssertion(rdfs:label "obsolete predominantly gray regional part of ventral lateral nucleus") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete predominantly white dorsal regional part of medial geniculate body) AnnotationAssertion( "BIRNLEX:1203") AnnotationAssertion(Annotation( "BIRNLEX:1203") "predominantly white dorsal regional part of medial geniculate body") AnnotationAssertion(Annotation( "BIRNLEX:1203") Annotation( ) "predominantly white dorsal regional part of medial geniculate body") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0029215") AnnotationAssertion(rdfs:label "obsolete predominantly white dorsal regional part of medial geniculate body") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete predominantly gray regional part of superior olive) AnnotationAssertion( "BIRNLEX:1385") AnnotationAssertion(Annotation( "BIRNLEX:1385") "predominantly gray regional part of superior olive") AnnotationAssertion(Annotation( "BIRNLEX:1385") Annotation( ) "predominantly gray regional part of superior olive") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0029396") AnnotationAssertion(rdfs:label "obsolete predominantly gray regional part of superior olive") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete regional part of paraventricular nucleus of hypothalamus magnocellular division - posterior magnocellular part) AnnotationAssertion( "BIRNLEX:1403") AnnotationAssertion(Annotation( "BIRNLEX:1403") "regional part of paraventricular nucleus of hypothalamus magnocellular division - posterior magnocellular part") AnnotationAssertion(Annotation( "BIRNLEX:1403") Annotation( ) "regional part of paraventricular nucleus of hypothalamus magnocellular division - posterior magnocellular part") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0029415") AnnotationAssertion(rdfs:label "obsolete regional part of paraventricular nucleus of hypothalamus magnocellular division - posterior magnocellular part") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (sacral spinal cord gray matter) AnnotationAssertion( "BIRNLEX:1491") AnnotationAssertion(Annotation( "BIRNLEX:1491") "sacral spinal cord gray matter") AnnotationAssertion(Annotation( "BIRNLEX:1491") Annotation( ) "sacral spinal cord gray matter") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0029503") AnnotationAssertion(rdfs:label "sacral spinal cord gray matter") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (sacral spinal cord lateral horn) AnnotationAssertion( "BIRNLEX:1527") AnnotationAssertion(Annotation( "BIRNLEX:1527") "sacral spinal cord lateral horn") AnnotationAssertion(Annotation( "BIRNLEX:1527") Annotation( ) "sacral spinal cord lateral horn") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BIRNLEX:1527") "sacral spinal cord intermediate horn") AnnotationAssertion( "UBERON:0029538") AnnotationAssertion(rdfs:label "sacral spinal cord lateral horn") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses(Annotation( "NIFSTD"^^xsd:string) ) # Class: (obsolete predominantly gray regional part of lateral geniculate body) AnnotationAssertion( "BIRNLEX:1583") AnnotationAssertion(Annotation( "BIRNLEX:1583") "predominantly gray regional part of lateral geniculate body") AnnotationAssertion(Annotation( "BIRNLEX:1583") Annotation( ) "predominantly gray regional part of lateral geniculate body") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0029594") AnnotationAssertion(rdfs:label "obsolete predominantly gray regional part of lateral geniculate body") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete predominantly gray regional part of medial geniculate body) AnnotationAssertion( "BIRNLEX:1592") AnnotationAssertion(Annotation( "BIRNLEX:1592") "predominantly gray regional part of medial geniculate body") AnnotationAssertion(Annotation( "BIRNLEX:1592") Annotation( ) "predominantly gray regional part of medial geniculate body") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0029603") AnnotationAssertion(rdfs:label "obsolete predominantly gray regional part of medial geniculate body") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (cervical spinal cord gray commissure) AnnotationAssertion( "BIRNLEX:1614") AnnotationAssertion(Annotation( "BIRNLEX:1614") "cervical spinal cord gray commissure") AnnotationAssertion(Annotation( "BIRNLEX:1614") Annotation( ) "cervical spinal cord gray commissure") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0029626") AnnotationAssertion(rdfs:label "cervical spinal cord gray commissure") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete predominantly white regional part of globus pallidus) AnnotationAssertion( "BIRNLEX:1617") AnnotationAssertion(Annotation( "BIRNLEX:1617") "predominantly white regional part of globus pallidus") AnnotationAssertion(Annotation( "BIRNLEX:1617") Annotation( ) "predominantly white regional part of globus pallidus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0029629") AnnotationAssertion(rdfs:label "obsolete predominantly white regional part of globus pallidus") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (lumbar spinal cord gray matter) AnnotationAssertion( "BIRNLEX:1624") AnnotationAssertion(Annotation( "BIRNLEX:1624") "lumbar spinal cord gray matter") AnnotationAssertion(Annotation( "BIRNLEX:1624") Annotation( ) "lumbar spinal cord gray matter") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0029636") AnnotationAssertion(rdfs:label "lumbar spinal cord gray matter") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete predominantly gray regional part of ventral posterior nucleus) AnnotationAssertion( "BIRNLEX:1671") AnnotationAssertion(Annotation( "BIRNLEX:1671") "predominantly gray regional part of ventral posterior nucleus") AnnotationAssertion(Annotation( "BIRNLEX:1671") Annotation( ) "predominantly gray regional part of ventral posterior nucleus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0029681") AnnotationAssertion(rdfs:label "obsolete predominantly gray regional part of ventral posterior nucleus") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete regional part of basilar membrane) AnnotationAssertion( "BIRNLEX:2527") AnnotationAssertion(Annotation( "BIRNLEX:2527") "regional part of basilar membrane") AnnotationAssertion(Annotation( "BIRNLEX:2527") Annotation( ) "regional part of basilar membrane") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0029822") AnnotationAssertion(rdfs:label "obsolete regional part of basilar membrane") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete regional part of trapezoid nuclear complex) AnnotationAssertion( "BIRNLEX:2574") AnnotationAssertion(Annotation( "BIRNLEX:2574") "regional part of trapezoid nuclear complex") AnnotationAssertion(Annotation( "BIRNLEX:2574") Annotation( ) "regional part of trapezoid nuclear complex") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0029861") AnnotationAssertion(rdfs:label "obsolete regional part of trapezoid nuclear complex") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete regional part of lateral amygdaloid nucleus) AnnotationAssertion( "BIRNLEX:2688") AnnotationAssertion(Annotation( "BIRNLEX:2688") "regional part of lateral amygdaloid nucleus") AnnotationAssertion(Annotation( "BIRNLEX:2688") Annotation( ) "regional part of lateral amygdaloid nucleus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0029954") AnnotationAssertion(rdfs:label "obsolete regional part of lateral amygdaloid nucleus") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete predominantly gray part of basal amygdaloid nucleus) AnnotationAssertion( "BIRNLEX:2694") AnnotationAssertion(Annotation( "BIRNLEX:2694") "predominantly gray part of basal amygdaloid nucleus") AnnotationAssertion(Annotation( "BIRNLEX:2694") Annotation( ) "predominantly gray part of basal amygdaloid nucleus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0029960") AnnotationAssertion(rdfs:label "obsolete predominantly gray part of basal amygdaloid nucleus") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete predominantly gray regional part of ventral anterior nucleus) AnnotationAssertion( "BIRNLEX:709") AnnotationAssertion(Annotation( "BIRNLEX:709") "predominantly gray regional part of ventral anterior nucleus") AnnotationAssertion(Annotation( "BIRNLEX:709") Annotation( ) "predominantly gray regional part of ventral anterior nucleus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0030119") AnnotationAssertion(rdfs:label "obsolete predominantly gray regional part of ventral anterior nucleus") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete predominantly gray regional part of pulvinar) AnnotationAssertion( "BIRNLEX:841") AnnotationAssertion(Annotation( "BIRNLEX:841") "predominantly gray regional part of pulvinar") AnnotationAssertion(Annotation( "BIRNLEX:841") Annotation( ) "predominantly gray regional part of pulvinar") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0030242") AnnotationAssertion(rdfs:label "obsolete predominantly gray regional part of pulvinar") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (lumbar spinal cord ventral horn) AnnotationAssertion( "BIRNLEX:891") AnnotationAssertion(Annotation( "BIRNLEX:891") "lumbar spinal cord ventral horn") AnnotationAssertion(Annotation( "BIRNLEX:891") Annotation( ) "lumbar spinal cord ventral horn") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BIRNLEX:891") "lumbar spinal cord anterior horn") AnnotationAssertion( "UBERON:0030276") AnnotationAssertion(rdfs:label "lumbar spinal cord ventral horn") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses(Annotation( "NIFSTD"^^xsd:string) ) DisjointClasses(Annotation( "NIFSTD"^^xsd:string) ) # Class: (obsolete predominantly gray part of rostral intralaminar nuclei) AnnotationAssertion( "BIRNLEX:948") AnnotationAssertion(Annotation( "BIRNLEX:948") Annotation( ) "predominantly gray part of rostral intralaminar nuclei") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0030330") AnnotationAssertion(rdfs:label "obsolete predominantly gray part of rostral intralaminar nuclei") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (cytoarchitecture of entorhinal cortex) AnnotationAssertion( "NLXANAT:20090703") AnnotationAssertion(Annotation( "NLXANAT:20090703") "cytoarchitecture of entorhinal cortex") AnnotationAssertion(Annotation( "NLXANAT:20090703") Annotation( ) "cytoarchitecture of entorhinal cortex") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0030649") AnnotationAssertion(rdfs:label "cytoarchitecture of entorhinal cortex") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (sacral spinal cord gray commissure) AnnotationAssertion( "BIRNLEX:1459") AnnotationAssertion(Annotation( "BIRNLEX:1459") "sacral spinal cord gray commissure") AnnotationAssertion(Annotation( "BIRNLEX:1459") Annotation( ) "sacral spinal cord gray commissure") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0031111") AnnotationAssertion(rdfs:label "sacral spinal cord gray commissure") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses(Annotation( "NIFSTD"^^xsd:string) ) # Class: (obsolete predominantly gray regional part of globus pallidus) AnnotationAssertion( "BIRNLEX:1545") AnnotationAssertion(Annotation( "BIRNLEX:1545") "predominantly gray regional part of globus pallidus") AnnotationAssertion(Annotation( "BIRNLEX:1545") Annotation( ) "predominantly gray regional part of globus pallidus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0031196") AnnotationAssertion(rdfs:label "obsolete predominantly gray regional part of globus pallidus") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete predominantly gray regional part of ventral posterolateral nucleus) AnnotationAssertion( "BIRNLEX:1664") AnnotationAssertion(Annotation( "BIRNLEX:1664") "predominantly gray regional part of ventral posterolateral nucleus") AnnotationAssertion(Annotation( "BIRNLEX:1664") Annotation( ) "predominantly gray regional part of ventral posterolateral nucleus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0031314") AnnotationAssertion(rdfs:label "obsolete predominantly gray regional part of ventral posterolateral nucleus") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (lumbar spinal cord lateral horn) AnnotationAssertion( "BIRNLEX:877") AnnotationAssertion(Annotation( "BIRNLEX:877") "lumbar spinal cord lateral horn") AnnotationAssertion(Annotation( "BIRNLEX:877") Annotation( ) "lumbar spinal cord lateral horn") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BIRNLEX:877") "lumbar spinal cord intermediate horn") AnnotationAssertion( "UBERON:0031906") AnnotationAssertion(rdfs:label "lumbar spinal cord lateral horn") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses(Annotation( "NIFSTD"^^xsd:string) ) # Class: (obsolete predominantly gray regional part of ventral posteromedial nucleus) AnnotationAssertion( "BIRNLEX:924") AnnotationAssertion(Annotation( "BIRNLEX:924") "predominantly gray regional part of ventral posteromedial nucleus") AnnotationAssertion(Annotation( "BIRNLEX:924") Annotation( ) "predominantly gray regional part of ventral posteromedial nucleus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0031948") AnnotationAssertion(rdfs:label "obsolete predominantly gray regional part of ventral posteromedial nucleus") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (sacral spinal cord ventral horn) AnnotationAssertion( "BIRNLEX:1457") AnnotationAssertion(Annotation( "BIRNLEX:1457") "sacral spinal cord ventral horn") AnnotationAssertion(Annotation( "BIRNLEX:1457") Annotation( ) "sacral spinal cord ventral horn") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BIRNLEX:1457") "sacral spinal cord anterior horn") AnnotationAssertion( "UBERON:0032748") AnnotationAssertion(rdfs:label "sacral spinal cord ventral horn") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lumbar spinal cord gray commissure) AnnotationAssertion( "BIRNLEX:802") AnnotationAssertion(Annotation( "BIRNLEX:802") "lumbar spinal cord gray commissure") AnnotationAssertion(Annotation( "BIRNLEX:802") Annotation( ) "lumbar spinal cord gray commissure") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0033483") AnnotationAssertion(rdfs:label "lumbar spinal cord gray commissure") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (sacral spinal cord dorsal horn) AnnotationAssertion( "BIRNLEX:1453") AnnotationAssertion(Annotation( "BIRNLEX:1453") "sacral spinal cord dorsal horn") AnnotationAssertion(Annotation( "BIRNLEX:1453") Annotation( ) "sacral spinal cord dorsal horn") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BIRNLEX:1453") "sacral spinal cord posterior horn") AnnotationAssertion( "UBERON:0033939") AnnotationAssertion(rdfs:label "sacral spinal cord dorsal horn") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete regional part of lumbar spinal cord dorsal horn) AnnotationAssertion( "BIRNLEX:791") AnnotationAssertion(Annotation( "BIRNLEX:791") "regional part of lumbar spinal cord dorsal horn") AnnotationAssertion(Annotation( "BIRNLEX:791") Annotation( ) "regional part of lumbar spinal cord dorsal horn") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0034667") AnnotationAssertion(rdfs:label "obsolete regional part of lumbar spinal cord dorsal horn") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (palatal taste bud) AnnotationAssertion(Annotation( ) Annotation( ) "A taste bud that is located on the soft palate, in the roof of the mouth.") AnnotationAssertion( "In the mouse, Fungiform and palatal taste buds are innervated by the geniculate ganglion cells of the facial nerve[DOI:10.1523/JNEUROSCI.5142-05.2006]") AnnotationAssertion( "taste bud of palate") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0034670") AnnotationAssertion(rdfs:label "palatal taste bud") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (arcuate sulcus) AnnotationAssertion(Annotation( "NLX:153910") "Composite sulcus of the frontal lobe of the macaque. Located on the dorsolateral surface, it consists of the superior ramus of the arcuate sulcus (macaque), the inferior ramus of the arcuate sulcus and the spur of the arcuate sulcus (macaque) (http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=2379).") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "NLX:153910") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:2379") "arcuate sulcus") AnnotationAssertion(Annotation( "NeuroNames:2379") "inferior precentral sulcus (Walker)") AnnotationAssertion(Annotation( "NeuroNames:2379") Annotation( ) "sulcus arcuata") AnnotationAssertion(Annotation( "NeuroNames:2379") Annotation( ) "sulcus arcuatis") AnnotationAssertion(Annotation( "NeuroNames:2379") Annotation( ) "sulcus arcuatus") AnnotationAssertion( "UBERON:0034671") AnnotationAssertion(rdfs:label "arcuate sulcus") SubClassOf( ) SubClassOf(Annotation( "NIFSTD"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (lateral eminence of fourth ventricle) AnnotationAssertion(Annotation( "FMA:78478") "vestibular area") AnnotationAssertion( ) AnnotationAssertion( "FMA:78478") AnnotationAssertion(Annotation( "FMA:78478") "lateral eminence of fourth ventricle") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:623") Annotation( ) "area vestibularis") AnnotationAssertion( "UBERON:0034672") AnnotationAssertion(rdfs:label "lateral eminence of fourth ventricle") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (amygdalohippocampal area) AnnotationAssertion(Annotation( ) "A cytoarchitecturally defined portion of the periamygdalar area and the cortical amygdalar nucleus at the caudal extreme of the amygdala.") AnnotationAssertion( "All authors regard it as occupying the caudal third of the amygdala, which abuts the hippocampal formation. In the human ( Mai-1997 ) and the macaque ( Amaral-1992 ) it is located close to the medial surface of the temporal lobe; it is bounded internally by the posterior cortical amygdalar nucleus and the temporal horn of the lateral ventricle. In the rat ( Swanson-2004 ) and mouse ( Hof-2000 ) it is bounded largely by the posterior cortical amygdalar nucleus and the accessory basal nucleus (known as the basomedial nucleus of the amygdala in rodents); the stria terminalis separates it from the ventricle. According to some authors the amygdalohippocampal area extends anteriorly to occupy the caudal half of the amygdala. These authors divide the area into two or three parts, which in the human ( Olmos-2004 ), the rat ( Paxinos-2009b ), and the mouse ( Franklin-2008 ) are named on the basis of location: anterolateral, posterolateral and posteromedial parts. In the macaque ( Paxinos-2009a ) the rostral portion of the area is divided into two parts on the basis of cellular morphology: magnocellular and parvicellular parts. Some authors refer to the area in rodents as the 'posterior amygdalar nucleus' ( Swanson-2004; Hof-2000 ).[http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=2028]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "DHBA:10377") AnnotationAssertion( "DMBA:15945") AnnotationAssertion( "EMAPA:35124") AnnotationAssertion(Annotation( "MA"^^xsd:string) "EMAPA:35128") AnnotationAssertion( "FMA:77607") AnnotationAssertion( "HBA:4330") AnnotationAssertion( "MA:0002917") AnnotationAssertion( "PBA:10135") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "DHBA:10377") Annotation( ) "AHA") AnnotationAssertion(Annotation( "NeuroNames:2028") "amygdalo-hippocampal area") AnnotationAssertion(Annotation( "NeuroNames:2028") "amygdalohippocampal area") AnnotationAssertion(Annotation( "NeuroNames:2028") "amygdalohippocampal transition area") AnnotationAssertion(Annotation( "NeuroNames:2028") Annotation( ) "area amygdalohippocampalis") AnnotationAssertion(Annotation( ) Annotation( ) "area parahippocampalis") AnnotationAssertion(Annotation( "NeuroNames:2028") Annotation( ) "area periamygdalae caudalis ventralis") AnnotationAssertion(Annotation( "NeuroNames:2028") "posterior amygdalar nucleus") AnnotationAssertion(Annotation( "NeuroNames:2028") "posterior nucleus amygdala") AnnotationAssertion(Annotation( "NeuroNames:2028") "posterior nucleus of the amygdala") AnnotationAssertion( "UBERON:0034673") AnnotationAssertion(rdfs:label "amygdalohippocampal area") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "DHBA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (sulcus of limbic lobe) AnnotationAssertion( ) AnnotationAssertion( "HBA:9393") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "HBA:9393") Annotation( ) "LLs") AnnotationAssertion(Annotation( "NeuroNames:1314") "intralimbic sulcus") AnnotationAssertion( "UBERON:0034674") AnnotationAssertion(rdfs:label "sulcus of limbic lobe") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (forceps major of corpus callosum) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "DHBA:12025") AnnotationAssertion( "FMA:61949") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) "forceps major") AnnotationAssertion(Annotation( "FMA:61949") "forceps major of corpus callosum") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) "forceps occipitalis") AnnotationAssertion(Annotation( "FMA:61949") "major forceps") AnnotationAssertion(Annotation( "FMA:61949") "occipital forceps") AnnotationAssertion(Annotation( "FMA:61949") "posterior forceps") AnnotationAssertion(Annotation( "FMA:61949") "posterior forceps of corpus callosum") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "DHBA:12025") Annotation( ) "ccs-ma") AnnotationAssertion(Annotation( "NeuroNames:197") Annotation( ) "corpus callosum, forceps major") AnnotationAssertion(Annotation( "NeuroNames:197") "corpus callosum, posterior forceps (Arnold)") AnnotationAssertion(Annotation( "NeuroNames:197") Annotation( ) "forceps major corporis callosi") AnnotationAssertion(Annotation( "NeuroNames:197") "forceps major of corpus callosum") AnnotationAssertion(Annotation( "NeuroNames:197") "forceps major of the corpus callosum") AnnotationAssertion(Annotation( "NeuroNames:197") Annotation( ) "forceps occipitalis") AnnotationAssertion(Annotation( "NeuroNames:197") "occipital forceps") AnnotationAssertion(Annotation( "NeuroNames:197") "posterior forceps") AnnotationAssertion(Annotation( "NeuroNames:197") "posterior forceps of the corpus callosum") AnnotationAssertion( "UBERON:0034676") AnnotationAssertion(rdfs:label "forceps major of corpus callosum") SubClassOf( ) SubClassOf(Annotation( "DHBA"^^xsd:string) ObjectSomeValuesFrom( )) DisjointClasses(Annotation( "lexical"^^xsd:string) ) # Class: (forceps minor of corpus callosum) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "DHBA:12024") AnnotationAssertion( "FMA:61944") AnnotationAssertion(Annotation( "FMA:61944") "anterior forceps") AnnotationAssertion(Annotation( "FMA:61944") "anterior forceps of corpus callosum") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) "forceps frontalis") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) "forceps minor") AnnotationAssertion(Annotation( "FMA:61944") "frontal forceps") AnnotationAssertion(Annotation( "FMA:61944") "minor forceps") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:192") "anterior forceps") AnnotationAssertion(Annotation( "NeuroNames:192") "anterior forceps of the corpus callosum") AnnotationAssertion(Annotation( "NeuroNames:192") "corpus callosum, anterior forceps") AnnotationAssertion(Annotation( "NeuroNames:192") "corpus callosum, anterior forceps (Arnold)") AnnotationAssertion(Annotation( "NeuroNames:192") Annotation( ) "corpus callosum, forceps minor") AnnotationAssertion(Annotation( "NeuroNames:192") Annotation( ) "forceps frontalis") AnnotationAssertion(Annotation( "NeuroNames:192") Annotation( ) "forceps minor") AnnotationAssertion(Annotation( "NeuroNames:192") Annotation( ) "forceps minor corporis callosi") AnnotationAssertion(Annotation( "NeuroNames:192") Annotation( ) "forceps minor of corpus callosum") AnnotationAssertion(Annotation( "NeuroNames:192") "forceps minor of the corpus callosum") AnnotationAssertion(Annotation( "NeuroNames:192") "frontal forceps") AnnotationAssertion( "UBERON:0034678") AnnotationAssertion(rdfs:label "forceps minor of corpus callosum") SubClassOf( ) SubClassOf(Annotation( "DHBA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (laryngeal prominence) AnnotationAssertion(Annotation( ) Annotation( ) "A zone of thyroid cartilage formed by fusion of the two plate-like laminae of the cartilages.") AnnotationAssertion( ) AnnotationAssertion( "BTO:0003656") AnnotationAssertion( "FMA:55304") AnnotationAssertion(Annotation( "FMA:55304") "Adam's apple") AnnotationAssertion( "Adams apple") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0034680") AnnotationAssertion(rdfs:label "laryngeal prominence") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (vocal organ) AnnotationAssertion(Annotation( ) "Any organ that is the primary organ of vocalization behavior. Examples: The laryngeal vocal cord (humans), the syrinx (birds).") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0034681") AnnotationAssertion(rdfs:label "vocal organ") SubClassOf( ) # Class: (spermatic fascia) AnnotationAssertion( ) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0034688") AnnotationAssertion(rdfs:label "spermatic fascia") SubClassOf( ) # Class: (external spermatic fascia) AnnotationAssertion(Annotation( ) "A thin membrane, prolonged downward around the surface of the spermatic cord and testis. It is separated from the dartos tunic by loose areolar tissue. It is derived from the aponeurosis of the abdominal external oblique muscle.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:69248") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "Webster's fascia") AnnotationAssertion(Annotation( ) "intercolumnar fascia") AnnotationAssertion(Annotation( ) "intercrural fascia") AnnotationAssertion( "UBERON:0034690") AnnotationAssertion(rdfs:label "external spermatic fascia") SubClassOf( ) # Class: (internal spermatic fascia) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:77299") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "infundibuliform fascia") AnnotationAssertion( "UBERON:0034691") AnnotationAssertion(rdfs:label "internal spermatic fascia") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (cremasteric artery) AnnotationAssertion(Annotation( ) "The cremasteric artery (external spermatic artery) is a branch of the Inferior epigastric artery which accompanies the spermatic cord, and supplies the Cremaster and other coverings of the cord, anastomosing with the testicular artery (internal spermatic artery in older texts). (In the female, the cremesteric artery is very small and accompanies the round ligament.).") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:70192") AnnotationAssertion(Annotation( "FMA:70192") "cremasteric part of inferior epigastric artery") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "external spermatic artery") AnnotationAssertion( "UBERON:0034693") AnnotationAssertion(rdfs:label "cremasteric artery") SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (gubernacular bulb, intra-abdominal part) AnnotationAssertion(Annotation( ) Annotation( "ISBN:0123971756") "The portion of the gubernacular bulb that is located within the abdomen.") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "ISBN:0123971756") "gubernacular cone") AnnotationAssertion( "UBERON:0034694") AnnotationAssertion(rdfs:label "gubernacular bulb, intra-abdominal part") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (gubernacular bulb, extra-abdominal part) AnnotationAssertion(Annotation( ) Annotation( "ISBN:0123971756") "The portion of the gubernacular bulb that is located external to the abdomen.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0034695") AnnotationAssertion(rdfs:label "gubernacular bulb, extra-abdominal part") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (fold of peritoneum) AnnotationAssertion( ) AnnotationAssertion( "FMA:20610") AnnotationAssertion(Annotation( "FMA:20610") "peritoneal fold") AnnotationAssertion( "peritoneal outpouching") AnnotationAssertion( "uberon") AnnotationAssertion( "peritoneal pouch") AnnotationAssertion( "UBERON:0034696") AnnotationAssertion(rdfs:label "fold of peritoneum") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (inflow tract) AnnotationAssertion( "FMA:14057") AnnotationAssertion( "cardiac inflow tract") AnnotationAssertion( "heart inflow tract") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "venous pole") AnnotationAssertion( "UBERON:0034697") AnnotationAssertion(rdfs:label "inflow tract") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (inflow tract of ventricle) AnnotationAssertion( "FMA:13224") AnnotationAssertion(Annotation( "FMA:13224") "ventricular inflow tract") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0034698") AnnotationAssertion(rdfs:label "inflow tract of ventricle") SubClassOf( ) # Class: (inflow tract of atrium) AnnotationAssertion( "FMA:14140") AnnotationAssertion(Annotation( "FMA:14140") "inflow tract of atrium") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0034699") AnnotationAssertion(rdfs:label "inflow tract of atrium") SubClassOf( ) # Class: (inflow tract of right ventricle) AnnotationAssertion( ) AnnotationAssertion( "FMA:9552") AnnotationAssertion(Annotation( "FMA:9552") "inflow part of right ventricle") AnnotationAssertion(Annotation( "FMA:9552") "main part of right ventricle") AnnotationAssertion(Annotation( "FMA:9552") "right ventricle proper") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:9552") "vestibule of tricuspid valve") AnnotationAssertion( "UBERON:0034703") AnnotationAssertion(rdfs:label "inflow tract of right ventricle") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (inflow tract of left ventricle) AnnotationAssertion( ) AnnotationAssertion( "FMA:9564") AnnotationAssertion(Annotation( "FMA:9564") "inflow part of left ventricle") AnnotationAssertion(Annotation( "FMA:9564") "left ventricle proper") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0034704") AnnotationAssertion(rdfs:label "inflow tract of left ventricle") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (developing neuroepithelium) AnnotationAssertion(Annotation( "AEO:0001008") Annotation( "AEO:JB"^^xsd:string) "An embryonic or larval epithelium that is committed to form part of the nervous system.") AnnotationAssertion(Annotation( "BTO:0000314") "neurepithelium") AnnotationAssertion( "AEO:0001008") AnnotationAssertion( "BTO:0000314") AnnotationAssertion( "EHDAA2_RETIRED:0004654") AnnotationAssertion( "FMA:64807") AnnotationAssertion(Annotation( ) "embryonic neuroepithelium") AnnotationAssertion(Annotation( "AEO:0001008") "neuroepithelium") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0034705") AnnotationAssertion(rdfs:label "developing neuroepithelium") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (proliferating neuroepithelium) AnnotationAssertion(Annotation( "AEO:0001009") "An epithelium that is undergoing proliferation to provide large numbers of neuronal cells.") AnnotationAssertion( "AEO:0001009") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0034706") AnnotationAssertion(rdfs:label "proliferating neuroepithelium") SubClassOf(Annotation( "AEO"^^xsd:string) ) # Class: (differentiating neuroepithelium) AnnotationAssertion(Annotation( "AEO:0001010") "A neuroepithelium some of whose cells are undergoing terminal differentiation to become neuronal cells.") AnnotationAssertion( "AEO:0001010") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0034707") AnnotationAssertion(rdfs:label "differentiating neuroepithelium") SubClassOf(Annotation( "AEO"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (cerebellum marginal layer) AnnotationAssertion( "In the cerebellum, some neuronal precursors enter the marginal zone to form clusters of neurons called nuclei[NBK10047]") AnnotationAssertion( "DHBA:12695") AnnotationAssertion( "EHDAA2:0001152") AnnotationAssertion( "EMAPA:17789") AnnotationAssertion(Annotation( "DHBA:12695") "marginal zone of cerebellum") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "DHBA:12695") Annotation( ) "MZCB") AnnotationAssertion( "UBERON:0034708") AnnotationAssertion(rdfs:label "cerebellum marginal layer") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (hindbrain marginal layer) AnnotationAssertion( "DHBA:12694") AnnotationAssertion( "EMAPA:32916") AnnotationAssertion(Annotation( "DHBA:12694") "marginal zone of hindbrain") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "DHBA:12694") Annotation( ) "MZH") AnnotationAssertion( "UBERON:0034709") AnnotationAssertion(rdfs:label "hindbrain marginal layer") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (spinal cord ventricular layer) AnnotationAssertion( "EHDAA2:0001267") AnnotationAssertion( "EMAPA:17585") AnnotationAssertion(Annotation( "EHDAA2:0001267") "spinal cord lateral wall ventricular layer") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0034710") AnnotationAssertion(rdfs:label "spinal cord ventricular layer") SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (cortical preplate) AnnotationAssertion(Annotation( ) "The layer of the developing cerebral cortex that is formed from the first cohort of neurons to migrate out of the cortical ventricular zone; split by the second wave into marginal zone and subplate.") AnnotationAssertion( "EMAPA:35261") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0034711") AnnotationAssertion(rdfs:label "cortical preplate") SubClassOf( ) # Class: (yellow fibrocartilage) AnnotationAssertion(Annotation( ) "Fibrocartilage containing bundles of yellow elastic fibers but with little or no white fibrous tissue.") AnnotationAssertion( ) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0034712") AnnotationAssertion(rdfs:label "yellow fibrocartilage") SubClassOf(Annotation( "cjm"^^xsd:string) ) # Class: (cranial neuron projection bundle) AnnotationAssertion(Annotation( ) Annotation( "ISBN:0471888893"^^xsd:string) "Any of the cranial nerves, or their central nervous system analogs (the optic tract, the epiphyseal tract). These analogs are not true nerves, and are instead evaginated sensory afferents emanating from the brain.") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "cranial nerve fiber bundle") AnnotationAssertion(Annotation( ) "cranial nerve fiber tract") AnnotationAssertion(Annotation( ) "cranial nerve or tract") AnnotationAssertion(Annotation( ) "neuron projection bundle from brain") AnnotationAssertion( "UBERON:0034713") AnnotationAssertion(rdfs:label "cranial neuron projection bundle") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (integumental taste bud) AnnotationAssertion(Annotation( ) Annotation( ) "A taste bud that is located external to the digestive tube, on the head or body, as found in species such as goldfish.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0034717") AnnotationAssertion(rdfs:label "integumental taste bud") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (barbel taste bud) AnnotationAssertion(Annotation( ) Annotation( ) "A taste bud that is located on a barbel.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0034718") AnnotationAssertion(rdfs:label "barbel taste bud") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lip taste bud) AnnotationAssertion(Annotation( ) Annotation( ) "A taste bud that is located on a lip.") AnnotationAssertion( ) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0034719") AnnotationAssertion(rdfs:label "lip taste bud") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pharyngeal taste bud) AnnotationAssertion(Annotation( ) "A taste bud that is located in the pharynx.") AnnotationAssertion( ) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0034721") AnnotationAssertion(rdfs:label "pharyngeal taste bud") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (mouth roof taste bud) AnnotationAssertion(Annotation( ) "A taste bud that is located on the roof of the mouth.") AnnotationAssertion( ) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0034722") AnnotationAssertion(rdfs:label "mouth roof taste bud") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pterygopalatine nerve) AnnotationAssertion(Annotation( ) "The pharyngeal nerve (pterygopalatine nerve) is a small branch arising from the posterior part of the pterygopalatine ganglion. It passes through the pharyngeal canal with the pharyngeal branch of the maxillary artery, and is distributed to the mucous membrane of the nasal part of the pharynx, behind the auditory tube.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:52731") AnnotationAssertion(Annotation( "FMA:52731") "ganglionic branch of maxillary nerve to pterygopalatine ganglion") AnnotationAssertion(Annotation( "FMA:52731") "pterygopalatine nerve") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) "radix sensoria ganglii pterygopalatini") AnnotationAssertion(Annotation( "FMA:52731") "sensory root of pterygopalatine ganglion") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "pharyngeal nerve") AnnotationAssertion( "UBERON:0034725") AnnotationAssertion(rdfs:label "pterygopalatine nerve") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (vestibular bulb artery) AnnotationAssertion(Annotation( ) "The artery of bulb of vestibule is a branch of the internal pudendal artery.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:20900") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) Annotation( ) "arteria bulbi vestibuli") AnnotationAssertion(Annotation( "FMA:20900") "artery of bulb of vestibule") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0034727") AnnotationAssertion(rdfs:label "vestibular bulb artery") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (autonomic nerve) AnnotationAssertion(Annotation( ) "The autonomic nerve is a small nerve which carries postganglionic sympathetic and parasympathetic neurons from the zygomaticotemporal nerve; a branch of the maxillary nerve, to the lacrimal nerve; a branch of the ophthalmic nerve. These neurons derive from the superior cervical ganglion and the pterygopalatine ganglion respectively. They will travel to the lacrimal gland via the lacrimal nerve. Parasympathetic will induce lacrimation and vice versa.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37957") AnnotationAssertion( "FMA:5866") AnnotationAssertion( "MESH:D017776") AnnotationAssertion(Annotation( "FMA:5866") "nervus visceralis") AnnotationAssertion(Annotation( "FMA:5866") "visceral nerve") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0034728") AnnotationAssertion(rdfs:label "autonomic nerve") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (sympathetic nerve) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37958") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0034729") AnnotationAssertion(rdfs:label "sympathetic nerve") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (olfactory tract linking bulb to ipsilateral dorsal telencephalon) AnnotationAssertion(Annotation( "ZFA:0000229") "Telencephalic white matter which extends between the olfactory bulb and the ipsilateral dorsal telencephalon and carries secondary olfactory fibers. From Neuroanatomy of the Zebrafish Brain.") AnnotationAssertion( "TAO:0000229") AnnotationAssertion( "ZFA:0000229") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "ZFA:0000229") "lateral olfactory tract") AnnotationAssertion(Annotation( "ZFA:0000229") "tractus olfactorius lateralis") AnnotationAssertion( "UBERON:0034730") AnnotationAssertion(rdfs:label "olfactory tract linking bulb to ipsilateral dorsal telencephalon") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) # Class: (medial olfactory stria) AnnotationAssertion(Annotation( ) "The medial olfactory stria turns medialward behind the parolfactory area and ends in the subcallosal gyrus; in some cases a small intermediate stria is seen running backward to the anterior perforated substance.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "DHBA:12076") AnnotationAssertion( "DMBA:17779") AnnotationAssertion( "FMA:77627") AnnotationAssertion( "HBA:265505518") AnnotationAssertion(Annotation( "FMA:77627") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "stria olfactoria medialis") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:2278") "medial olfactory tract") AnnotationAssertion(Annotation( "NeuroNames:2278") Annotation( ) "tractus olfactorius medialis") AnnotationAssertion( "UBERON:0034734") AnnotationAssertion(rdfs:label "medial olfactory stria") SubClassOf(Annotation( "FMA"^^xsd:string) ) DisjointClasses( ) # Class: (oviduct albumen gland) AnnotationAssertion(Annotation( "ISBN:978-0226870137") "A gland in the glandular region of the oviduct that secretes albumen over the ovum. In birds there are two regions of the oviduct, the first secretes a thin chalaziferous albumen layer, the second secretes a thicker albumen layer.") AnnotationAssertion( "BTO:0000054") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0034735") AnnotationAssertion(rdfs:label "oviduct albumen gland") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (coracoclavicular ligament) AnnotationAssertion(Annotation( ) "Any ligament that connects the coracoid process with the clavicle.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:26029") AnnotationAssertion(Annotation( "FMA:26029") "accessory ligament of acromioclavicular joint") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0034736") AnnotationAssertion(rdfs:label "coracoclavicular ligament") SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (inferior longitudinal fasciculus) AnnotationAssertion(Annotation( ) "The inferior longitudinal fasciculus connects the temporal lobe and occipital lobe, running along the lateral walls of the inferior and posterior cornua of the lateral ventricle. The existence of this fasciculus independent from the occipitotemporal fasciculus has been questioned for the human being, such that it has been proposed that the term inferior longitudinal fasciculus be replaced by the term 'occipitotemporal projection'.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "DHBA:10580") AnnotationAssertion( "FMA:77632") AnnotationAssertion( "HBA:9260") AnnotationAssertion( "NeuroNamesCNID:538") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:1443") "external sagittal stratum") AnnotationAssertion(Annotation( "NeuroNames:1443") Annotation( ) "fasciculus fronto-occipitalis inferior") AnnotationAssertion(Annotation( "NeuroNames:1443") Annotation( ) "fasciculus longitudinalis inferior") AnnotationAssertion(Annotation( "DHBA:10580") Annotation( ) "ilf") AnnotationAssertion( "UBERON:0034743") AnnotationAssertion(rdfs:label "inferior longitudinal fasciculus") SubClassOf( ) SubClassOf(Annotation( "HBA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "DHBA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (radiation of thalamus) AnnotationAssertion( "todo - add all") AnnotationAssertion( "FMA:76975") AnnotationAssertion(Annotation( "FMA:76975") "thalamus radiation") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:76975") "thalamic radiation") AnnotationAssertion( "UBERON:0034745") AnnotationAssertion(rdfs:label "radiation of thalamus") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (anterior thalamic radiation) AnnotationAssertion( ) AnnotationAssertion( "DHBA:12043") AnnotationAssertion( "FMA:76976") AnnotationAssertion(Annotation( "FMA:76976") "anterior radiation of thalamus") AnnotationAssertion(Annotation( "FMA:76976") "anterior thalamic radiation") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) "radiatio thalami anterior") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:1726") "anterior thalamic radiation") AnnotationAssertion(Annotation( "NeuroNames:1726") "anterior thalamic radiations") AnnotationAssertion(Annotation( "DHBA:12043") Annotation( ) "athf") AnnotationAssertion(Annotation( "NeuroNames:1726") Annotation( ) "radiationes thalamicae anteriores") AnnotationAssertion( "UBERON:0034746") AnnotationAssertion(rdfs:label "anterior thalamic radiation") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "DHBA"^^xsd:string) ObjectSomeValuesFrom( )) DisjointClasses(Annotation( "lexical"^^xsd:string) ) # Class: (posterior thalamic radiation) AnnotationAssertion( ) AnnotationAssertion( "DHBA:12053") AnnotationAssertion( "FMA:76982") AnnotationAssertion(Annotation( "FMA:76982") "posterior thalamic radiation") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) "radiatio posterior thalami") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) "radiatio thalamica posterior") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:2083") "posterior thalamic radiation") AnnotationAssertion(Annotation( "NeuroNames:2083") "posterior thalamic radiations") AnnotationAssertion(Annotation( "DHBA:12053") Annotation( ) "pthr") AnnotationAssertion(Annotation( "NeuroNames:2083") Annotation( ) "radiationes thalamicae posteriores") AnnotationAssertion( "UBERON:0034747") AnnotationAssertion(rdfs:label "posterior thalamic radiation") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (retrolenticular part of internal capsule) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "DHBA:12052") AnnotationAssertion( "FMA:61957") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) "pars retrolentiformis") AnnotationAssertion(Annotation( "FMA:61957") "postlenticular portion of internal capsule") AnnotationAssertion(Annotation( "FMA:61957") "retrolenticular limb") AnnotationAssertion(Annotation( "FMA:61957") "retrolentiform limb") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:203") Annotation( ) "pars retrolenticularis capsulae internae") AnnotationAssertion(Annotation( "NeuroNames:203") Annotation( ) "pars retrolentiformis (capsulae internae)") AnnotationAssertion(Annotation( "NeuroNames:203") "postlenticular portion of internal capsule") AnnotationAssertion(Annotation( "NeuroNames:203") "retrolenticular part of internal capsule") AnnotationAssertion(Annotation( "NeuroNames:203") "retrolenticular part of the internal capsule") AnnotationAssertion( "UBERON:0034749") AnnotationAssertion(rdfs:label "retrolenticular part of internal capsule") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "DHBA"^^xsd:string) Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (visual association cortex) AnnotationAssertion(Annotation( "NLX:143553") "Part of cortex considered to function in higher level visual functions.") AnnotationAssertion( "NLX:143553") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "visual association area") AnnotationAssertion(Annotation( ) "visual association cortex") AnnotationAssertion( "UBERON:0034750") AnnotationAssertion(rdfs:label "visual association cortex") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (primary auditory cortex) AnnotationAssertion(Annotation( ) "The part of the auditory cortex that is located on the superior temporal gyrus in the temporal lobe and receives point-to-point input from the ventral division of the medial geniculate complex.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "DHBA:10236") AnnotationAssertion( "FMA:272953") AnnotationAssertion(Annotation( "DHBA:10236") "primary auditory cortex (core)") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "DHBA:10236") Annotation( ) "A1C") AnnotationAssertion(Annotation( "NCBIBook:NBK10900") "auditory complex area A1") AnnotationAssertion(Annotation( "NeuroNames:1354") "auditory core region") AnnotationAssertion(Annotation( "NeuroNames:1354") "primary auditory area") AnnotationAssertion(Annotation( "NeuroNames:1354") "primary auditory cortex") AnnotationAssertion( "UBERON:0034751") AnnotationAssertion(rdfs:label "primary auditory cortex") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "cjm"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (secondary auditory cortex) AnnotationAssertion(Annotation( ) "The part of the auditory cortex that receive more diffuse input from the belt areas of the medial geniculate complex.") AnnotationAssertion( ) AnnotationAssertion( "DHBA:10239") AnnotationAssertion( "FMA:272944") AnnotationAssertion(Annotation( "FMA:272944") "belt auditory area") AnnotationAssertion(Annotation( "FMA:272944") "peripheral auditory cortex") AnnotationAssertion(Annotation( "NeuroNames:1557") "second auditory area") AnnotationAssertion(Annotation( "DHBA:10239") "secondary auditory cortex (belt, area 42)") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "DHBA:10239") Annotation( ) "A42") AnnotationAssertion(Annotation( "NCBIBook:NBK10900") "belt area of auditory complex") AnnotationAssertion(Annotation( "NeuroNames:1557") "second auditory area") AnnotationAssertion(Annotation( "NeuroNames:1557") "second auditory cortex") AnnotationAssertion( "UBERON:0034752") AnnotationAssertion(rdfs:label "secondary auditory cortex") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "cjm"^^xsd:string) ObjectSomeValuesFrom( )) DisjointClasses( ) # Class: (inferior occipitofrontal fasciculus) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "DHBA:12070") AnnotationAssertion( "FMA:77633") AnnotationAssertion(Annotation( "DHBA:12070") "inferior occipitofrontal fasciculus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:1442") Annotation( ) "fasciculus occipito-frontalis inferior") AnnotationAssertion(Annotation( "NeuroNames:1442") Annotation( ) "fasciculus occipitofrontalis inferior") AnnotationAssertion(Annotation( "NeuroNames:1442") "inferior fronto-occipital fasciculus") AnnotationAssertion(Annotation( "NeuroNames:1442") "inferior occipitofrontal fasciculus") AnnotationAssertion( "UBERON:0034753") AnnotationAssertion(rdfs:label "inferior occipitofrontal fasciculus") SubClassOf( ) # Class: (occipitofrontal fasciculus) AnnotationAssertion(Annotation( ) "The occipitofrontal fasciculus passes backward from the frontal lobe, along the lateral border of the caudate nucleus, and on the medial aspect of the corona radiata; its fibers radiate in a fan-like manner and pass into the occipital and temporal lobes lateral to the posterior and inferior cornua.") AnnotationAssertion( ) AnnotationAssertion( "DHBA:10588") AnnotationAssertion( "HBA:9269") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "inferior occipitofrontal fasciculus") AnnotationAssertion(Annotation( "DHBA:10588") Annotation( ) "off") AnnotationAssertion( "UBERON:0034754") AnnotationAssertion(rdfs:label "occipitofrontal fasciculus") SubClassOf( ) SubClassOf(Annotation( "HBA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "DHBA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (areolar sweat gland) AnnotationAssertion(Annotation( ) "Any sweat gland that is part of an areola.") AnnotationAssertion( "FMA:62149") AnnotationAssertion(Annotation( ) "areolar aprocine sweat gland") AnnotationAssertion(Annotation( "FMA:62149") "sweat gland of areola") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0034762") AnnotationAssertion(rdfs:label "areolar sweat gland") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (hindbrain commissure) AnnotationAssertion(Annotation( ) Annotation( "ZFIN:ZDB-PUB-090417-11") "Any commissure within the hindbrain.") AnnotationAssertion( "TAO:0002199") AnnotationAssertion( "ZFA:0001692") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0034763") AnnotationAssertion(rdfs:label "hindbrain commissure") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (remnant of cardiac valve) AnnotationAssertion( "FMA:14153") AnnotationAssertion(Annotation( "FMA:14153") "vestigial cardiac valve") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0034764") AnnotationAssertion(rdfs:label "remnant of cardiac valve") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (glabella skin) AnnotationAssertion(Annotation( ) Annotation( ) "The zone of skin that overlaps with the glabella region.") AnnotationAssertion( "in humans this area is normally hairless") AnnotationAssertion( "glabella") AnnotationAssertion( ) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0034765") AnnotationAssertion(rdfs:label "glabella skin") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (glabella region) AnnotationAssertion(Annotation( ) Annotation( ) "A region of the forehead corresponding to the space between the eyebrows and above the nose.") AnnotationAssertion( ) AnnotationAssertion( "glabella") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0034766") AnnotationAssertion(rdfs:label "glabella region") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (buccal vestibule) AnnotationAssertion(Annotation( "MURDOCH:240") "The buccal vestibule is the space external to teeth and gums and internal to lips and cheeks. The proportion of its walls formed by the lips varies according to species depending upon their feeding action. The horse like most herbivores has a relatively small opening. PPP The buccal vestibule opens to the outside rostrally via a U shaped slit the oral fissure. PPP When the mouth is closed the buccal vestibule and the mouth cavity proper connect via spaces between and behind the teeth. These allow free communication between the two sides of the vestibule. PPP Several salivary ducts open into the dorso caudal part of the vestibule: PPP Parotid gland - opens into the cheek on the small parotid papilla, opposite to the caudal part of upper 4 th premolar teeth PPP Zygomatic gland - the main duct opens in the caudal part of the upper 1 st molar tooth on a small papilla near the vestibular fornix PPP Submucous glands - minimal in number, confined to the lower lip and adjacent part of the cheek. Secretion occurs through about 10 openings located near the fornix of the vestibule.") AnnotationAssertion( "FMA:289320") AnnotationAssertion( "MURDOCH:240") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0034767") AnnotationAssertion(rdfs:label "buccal vestibule") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (morphological feature) AnnotationAssertion(Annotation( ) "A part of an organism or organ that is continuous with its surroundings and distinguished from its surroundings based on morphology.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0034768") AnnotationAssertion(rdfs:label "morphological feature") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lymphomyeloid tissue) AnnotationAssertion( "FMA:79770") AnnotationAssertion( "NCIT:C41168") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0034769") AnnotationAssertion(rdfs:label "lymphomyeloid tissue") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (bulbourethral gland epithelium) AnnotationAssertion( "EMAPA:29790") AnnotationAssertion( "epithelium of bulbourethral gland") AnnotationAssertion(Annotation( "EMAPA:29790") "epithelium of bulbourethral gland of male") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0034770") AnnotationAssertion(rdfs:label "bulbourethral gland epithelium") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (ventral commissural nucleus of spinal cord) AnnotationAssertion(Annotation( "NeuroNames:1658") "The term commissural nucleus of the spinal cord refers to a group of cells in the medial portion of the anterior gray column; it corresponds roughly to lamina VIII.") AnnotationAssertion(Annotation( "FMA:73900") "commissural nucleus of spinal cord") AnnotationAssertion( ) AnnotationAssertion( "FMA:73900") AnnotationAssertion(Annotation( "FMA:73900") "commissural nucleus of spinal cord") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:73900") "commissural nucleus of spinal cord") AnnotationAssertion( "lamina VIII") AnnotationAssertion( "UBERON:0034771") AnnotationAssertion(rdfs:label "ventral commissural nucleus of spinal cord") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) # Class: (margin of eyelid) AnnotationAssertion(Annotation( "MGI:anna"^^xsd:string) "The confluence of the mucosal surface of the conjunctiva, the edge of the orbicularis, and the cutaneous epithelium.") AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37905") AnnotationAssertion( "FMA:59356") AnnotationAssertion( "free margin of eyelid") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0034772") AnnotationAssertion(rdfs:label "margin of eyelid") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (uncus of parahippocampal gyrus) AnnotationAssertion(Annotation( ) "The anterior extremity of the Parahippocampal gyrus is recurved in the form of a hook, the uncus, which is separated from the apex of the temporal lobe by a slight fissure, the incisura temporalis. Although superficially continuous with the hippocampal gyrus, the uncus forms morphologically a part of the rhinencephalon. The term uncus was coined by Felix Vicq dbAzyr (1748b1794).") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "DHBA:12165") AnnotationAssertion( "FMA:74884") AnnotationAssertion( "NCIT:C33831") AnnotationAssertion(Annotation( "NeuroNames:40") Annotation( ) "uncus hippocampi") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:40") "pyriform area (Crosby)") AnnotationAssertion(Annotation( "NeuroNames:40") Annotation( ) "uncus") AnnotationAssertion( "UBERON:0034773") AnnotationAssertion(rdfs:label "uncus of parahippocampal gyrus") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "DHBA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (uncal CA1) AnnotationAssertion( "DHBA:266441267") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "DHBA:266441267") Annotation( ) "CA1U") AnnotationAssertion( "UBERON:0034774") AnnotationAssertion(rdfs:label "uncal CA1") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "DHBA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (uncal CA2) AnnotationAssertion( "DHBA:266441311") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "DHBA:266441311") Annotation( ) "CA2U") AnnotationAssertion( "UBERON:0034775") AnnotationAssertion(rdfs:label "uncal CA2") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "DHBA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (uncal CA3) AnnotationAssertion( "DHBA:266441355") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "DHBA:266441355") Annotation( ) "CA3U") AnnotationAssertion( "UBERON:0034776") AnnotationAssertion(rdfs:label "uncal CA3") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "DHBA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (rostral CA1) AnnotationAssertion( "DHBA:11275") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "DHBA:11275") Annotation( ) "CA1R") AnnotationAssertion( "UBERON:0034777") AnnotationAssertion(rdfs:label "rostral CA1") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "DHBA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (rostral CA2) AnnotationAssertion( "DHBA:11285") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "DHBA:11285") Annotation( ) "CA2R") AnnotationAssertion( "UBERON:0034778") AnnotationAssertion(rdfs:label "rostral CA2") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "DHBA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (rostral CA3) AnnotationAssertion( "DHBA:11295") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "DHBA:11295") Annotation( ) "CA3R") AnnotationAssertion( "UBERON:0034779") AnnotationAssertion(rdfs:label "rostral CA3") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "DHBA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (caudal CA1) AnnotationAssertion( "DHBA:11280") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "DHBA:11280") Annotation( ) "CA1C") AnnotationAssertion( "UBERON:0034780") AnnotationAssertion(rdfs:label "caudal CA1") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "DHBA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (caudal CA2) AnnotationAssertion( "DHBA:11290") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "DHBA:11290") Annotation( ) "CA2C") AnnotationAssertion( "UBERON:0034781") AnnotationAssertion(rdfs:label "caudal CA2") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "DHBA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (caudal CA3) AnnotationAssertion( "DHBA:11301") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "DHBA:11301") Annotation( ) "CA3C") AnnotationAssertion( "UBERON:0034782") AnnotationAssertion(rdfs:label "caudal CA3") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "DHBA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (stratum lacunosum-moleculare of caudal CA1) AnnotationAssertion( "DHBA:11281") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "DHBA:11281") Annotation( ) "CA1Cslm") AnnotationAssertion( "UBERON:0034798") AnnotationAssertion(rdfs:label "stratum lacunosum-moleculare of caudal CA1") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (stratum radiatum of caudal CA1) AnnotationAssertion( "DHBA:11282") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "DHBA:11282") Annotation( ) "CA1Csr") AnnotationAssertion( "UBERON:0034799") AnnotationAssertion(rdfs:label "stratum radiatum of caudal CA1") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (stratum pyramidale of caudal CA1) AnnotationAssertion( "DHBA:11283") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "DHBA:11283") Annotation( ) "CA1Csp") AnnotationAssertion( "UBERON:0034800") AnnotationAssertion(rdfs:label "stratum pyramidale of caudal CA1") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (stratum oriens of caudal CA1) AnnotationAssertion( "DHBA:11284") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "DHBA:11284") Annotation( ) "CA1Cso") AnnotationAssertion( "UBERON:0034801") AnnotationAssertion(rdfs:label "stratum oriens of caudal CA1") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (stratum lacunosum-moleculare of caudal CA2) AnnotationAssertion( "DHBA:11291") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "DHBA:11291") Annotation( ) "CA2Cslm") AnnotationAssertion( "UBERON:0034803") AnnotationAssertion(rdfs:label "stratum lacunosum-moleculare of caudal CA2") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (stratum radiatum of caudal CA2) AnnotationAssertion( "DHBA:11292") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "DHBA:11292") Annotation( ) "CA2Csr") AnnotationAssertion( "UBERON:0034804") AnnotationAssertion(rdfs:label "stratum radiatum of caudal CA2") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (stratum pyramidale of caudal CA2) AnnotationAssertion( "DHBA:11293") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "DHBA:11293") Annotation( ) "CA2Csp") AnnotationAssertion( "UBERON:0034805") AnnotationAssertion(rdfs:label "stratum pyramidale of caudal CA2") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (stratum oriens of caudal CA2) AnnotationAssertion( "DHBA:11294") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "DHBA:11294") Annotation( ) "CA2Cso") AnnotationAssertion( "UBERON:0034806") AnnotationAssertion(rdfs:label "stratum oriens of caudal CA2") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (stratum lacunosum-moleculare of caudal CA3) AnnotationAssertion( "DHBA:11302") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "DHBA:11302") Annotation( ) "CA3Cslm") AnnotationAssertion( "UBERON:0034808") AnnotationAssertion(rdfs:label "stratum lacunosum-moleculare of caudal CA3") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (stratum radiatum of caudal CA3) AnnotationAssertion( "DHBA:11303") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "DHBA:11303") Annotation( ) "CA3Csr") AnnotationAssertion( "UBERON:0034809") AnnotationAssertion(rdfs:label "stratum radiatum of caudal CA3") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (stratum lucidum of caudal CA3) AnnotationAssertion( "DHBA:11304") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "DHBA:11304") Annotation( ) "CA3Csl") AnnotationAssertion( "UBERON:0034810") AnnotationAssertion(rdfs:label "stratum lucidum of caudal CA3") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (stratum pyramidale of caudal CA3) AnnotationAssertion( "DHBA:11305") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "DHBA:11305") Annotation( ) "CA3Csp") AnnotationAssertion( "UBERON:0034811") AnnotationAssertion(rdfs:label "stratum pyramidale of caudal CA3") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (stratum oriens of caudal CA3) AnnotationAssertion( "DHBA:11306") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "DHBA:11306") Annotation( ) "CA3Cso") AnnotationAssertion( "UBERON:0034812") AnnotationAssertion(rdfs:label "stratum oriens of caudal CA3") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (stratum lacunosum-moleculare of rostral CA1) AnnotationAssertion( "DHBA:11276") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "DHBA:11276") Annotation( ) "CA1Rslm") AnnotationAssertion( "UBERON:0034828") AnnotationAssertion(rdfs:label "stratum lacunosum-moleculare of rostral CA1") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (stratum radiatum of rostral CA1) AnnotationAssertion( "DHBA:11277") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "DHBA:11277") Annotation( ) "CA1Rsr") AnnotationAssertion( "UBERON:0034829") AnnotationAssertion(rdfs:label "stratum radiatum of rostral CA1") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (stratum pyramidale of rostral CA1) AnnotationAssertion( "DHBA:11278") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "DHBA:11278") Annotation( ) "CA1Rsp") AnnotationAssertion( "UBERON:0034830") AnnotationAssertion(rdfs:label "stratum pyramidale of rostral CA1") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (stratum oriens of rostral CA1) AnnotationAssertion( "DHBA:11279") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "DHBA:11279") Annotation( ) "CA1Rso") AnnotationAssertion( "UBERON:0034831") AnnotationAssertion(rdfs:label "stratum oriens of rostral CA1") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (stratum lacunosum-moleculare of rostral CA2) AnnotationAssertion( "DHBA:11286") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "DHBA:11286") Annotation( ) "CA2Rslm") AnnotationAssertion( "UBERON:0034833") AnnotationAssertion(rdfs:label "stratum lacunosum-moleculare of rostral CA2") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (stratum radiatum of rostral CA2) AnnotationAssertion( "DHBA:11287") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "DHBA:11287") Annotation( ) "CA2Rsr") AnnotationAssertion( "UBERON:0034834") AnnotationAssertion(rdfs:label "stratum radiatum of rostral CA2") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (stratum pyramidale of rostral CA2) AnnotationAssertion( "DHBA:11288") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "DHBA:11288") Annotation( ) "CA2Rsp") AnnotationAssertion( "UBERON:0034835") AnnotationAssertion(rdfs:label "stratum pyramidale of rostral CA2") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (stratum oriens of rostral CA2) AnnotationAssertion( "DHBA:11289") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "DHBA:11289") Annotation( ) "CA2Rso") AnnotationAssertion( "UBERON:0034836") AnnotationAssertion(rdfs:label "stratum oriens of rostral CA2") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (stratum lacunosum-moleculare of rostral CA3) AnnotationAssertion( "DHBA:11296") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "DHBA:11296") Annotation( ) "CA3Rslm") AnnotationAssertion( "UBERON:0034838") AnnotationAssertion(rdfs:label "stratum lacunosum-moleculare of rostral CA3") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (stratum radiatum of rostral CA3) AnnotationAssertion( "DHBA:11297") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "DHBA:11297") Annotation( ) "CA3Rsr") AnnotationAssertion( "UBERON:0034839") AnnotationAssertion(rdfs:label "stratum radiatum of rostral CA3") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (stratum lucidum of rostral CA3) AnnotationAssertion( "DHBA:11298") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "DHBA:11298") Annotation( ) "CA3Rsl") AnnotationAssertion( "UBERON:0034840") AnnotationAssertion(rdfs:label "stratum lucidum of rostral CA3") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (stratum pyramidale of rostral CA3) AnnotationAssertion( "DHBA:11299") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "DHBA:11299") Annotation( ) "CA3Rsp") AnnotationAssertion( "UBERON:0034841") AnnotationAssertion(rdfs:label "stratum pyramidale of rostral CA3") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (stratum oriens of rostral CA3) AnnotationAssertion( "DHBA:11300") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "DHBA:11300") Annotation( ) "CA3Rso") AnnotationAssertion( "UBERON:0034842") AnnotationAssertion(rdfs:label "stratum oriens of rostral CA3") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (stratum lacunosum-moleculare of uncal CA1) AnnotationAssertion( "DHBA:266441271") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "DHBA:266441271") Annotation( ) "CA1Uslm") AnnotationAssertion( "UBERON:0034858") AnnotationAssertion(rdfs:label "stratum lacunosum-moleculare of uncal CA1") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (stratum radiatum of uncal CA1) AnnotationAssertion( "DHBA:266441283") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "DHBA:266441283") Annotation( ) "CA1Usr") AnnotationAssertion( "UBERON:0034859") AnnotationAssertion(rdfs:label "stratum radiatum of uncal CA1") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (stratum pyramidale of uncal CA1) AnnotationAssertion( "DHBA:266441287") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "DHBA:266441287") Annotation( ) "CA1Usp") AnnotationAssertion( "UBERON:0034860") AnnotationAssertion(rdfs:label "stratum pyramidale of uncal CA1") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (stratum oriens of uncal CA1) AnnotationAssertion( "DHBA:266441291") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "DHBA:266441291") Annotation( ) "CA1Uso") AnnotationAssertion( "UBERON:0034861") AnnotationAssertion(rdfs:label "stratum oriens of uncal CA1") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (stratum lacunosum-moleculare of uncal CA2) AnnotationAssertion( "DHBA:266441315") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "DHBA:266441315") Annotation( ) "CA2Uslm") AnnotationAssertion( "UBERON:0034863") AnnotationAssertion(rdfs:label "stratum lacunosum-moleculare of uncal CA2") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (stratum radiatum of uncal CA2) AnnotationAssertion( "DHBA:266441327") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "DHBA:266441327") Annotation( ) "CA2Usr") AnnotationAssertion( "UBERON:0034864") AnnotationAssertion(rdfs:label "stratum radiatum of uncal CA2") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (stratum pyramidale of uncal CA2) AnnotationAssertion( "DHBA:266441331") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "DHBA:266441331") Annotation( ) "CA2Usp") AnnotationAssertion( "UBERON:0034865") AnnotationAssertion(rdfs:label "stratum pyramidale of uncal CA2") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (stratum oriens of uncal CA2) AnnotationAssertion( "DHBA:266441335") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "DHBA:266441335") Annotation( ) "CA2Uso") AnnotationAssertion( "UBERON:0034866") AnnotationAssertion(rdfs:label "stratum oriens of uncal CA2") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (stratum lacunosum-moleculare of uncal CA3) AnnotationAssertion( "DHBA:266441359") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "DHBA:266441359") Annotation( ) "CA3Uslm") AnnotationAssertion( "UBERON:0034868") AnnotationAssertion(rdfs:label "stratum lacunosum-moleculare of uncal CA3") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (stratum radiatum of uncal CA3) AnnotationAssertion( "DHBA:266441371") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "DHBA:266441371") Annotation( ) "CA3Usr") AnnotationAssertion( "UBERON:0034869") AnnotationAssertion(rdfs:label "stratum radiatum of uncal CA3") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (stratum lucidum of uncal CA3) AnnotationAssertion( "DHBA:266441375") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "DHBA:266441375") Annotation( ) "CA3Usl") AnnotationAssertion( "UBERON:0034870") AnnotationAssertion(rdfs:label "stratum lucidum of uncal CA3") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (stratum pyramidale of uncal CA3) AnnotationAssertion( "DHBA:266441379") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "DHBA:266441379") Annotation( ) "CA3Usp") AnnotationAssertion( "UBERON:0034871") AnnotationAssertion(rdfs:label "stratum pyramidale of uncal CA3") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (stratum oriens of uncal CA3) AnnotationAssertion( "DHBA:266441383") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "DHBA:266441383") Annotation( ) "CA3Uso") AnnotationAssertion( "UBERON:0034872") AnnotationAssertion(rdfs:label "stratum oriens of uncal CA3") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (bodily gas) AnnotationAssertion(Annotation( ) "Any substance in the body or expelled from the body that is in a gaseous state.") AnnotationAssertion( "FMA:84580") AnnotationAssertion( "gas in anatomical space") AnnotationAssertion(Annotation( "FMA:84580") "portion of gas in anatomical space") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0034873") AnnotationAssertion(rdfs:label "bodily gas") SubClassOf( ) # Class: (air in respiratory system) AnnotationAssertion(Annotation( ) "Any portion of gas located in a part of the respiratory system that is composed primarily of air.") AnnotationAssertion( "FMA:84581") AnnotationAssertion(Annotation( "FMA:84581") "respiratory air") AnnotationAssertion( "respiratory system air") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0034874") AnnotationAssertion(rdfs:label "air in respiratory system") SubClassOf( ) # Class: (future pituitary gland) AnnotationAssertion( "EHDAA2:0001472") AnnotationAssertion( "EMAPA:32796") AnnotationAssertion(Annotation( "EHDAA2:0001472") "pituitary primordium") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0034875") AnnotationAssertion(rdfs:label "future pituitary gland") SubClassOf( ) SubClassOf(Annotation( "EMAPA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "Wikipedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (future neurohypophysis) AnnotationAssertion(Annotation( ) Annotation( "MP:0013339") "The outgrowth of neuroectoderm located on the floor of the embryonic hypothalamus that gives rise to the neurohypophysis (posterior lobe) of the pituitary gland.") AnnotationAssertion( "EMAPA:16647") AnnotationAssertion( "EHDAA2:0004434") AnnotationAssertion( "EMAPA:16647") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "EHDAA2:0004434") "neurohypohysial region") AnnotationAssertion(Annotation( "MP:0013339") "neurohypophyseal bud") AnnotationAssertion( "UBERON:0034876") AnnotationAssertion(rdfs:label "future neurohypophysis") SubClassOf( ) SubClassOf(Annotation( "EMAPA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EMAPA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (angioblastic cord) AnnotationAssertion(Annotation( "MP:0012500") "The cordlike masses of splanchnic mesenchymal cells ventral to the primordial pericardial coelom that arrange themselves side by side to form the primordia of the endocardial heart tubes.") AnnotationAssertion( "resolve placement within heart development hierarchy; potentially merge with existing classes") AnnotationAssertion( "day 18 [CS08] in human[https://embryology.med.unsw.edu.au/embryology/index.php/Intermediate_-_Primordial_Heart_Tube]") AnnotationAssertion( ) AnnotationAssertion( "NCIT:C34106") AnnotationAssertion( "angiogenic cell cluster") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0034877") AnnotationAssertion(rdfs:label "angioblastic cord") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (prechordal mesoderm) AnnotationAssertion(Annotation( "MGI:anna"^^xsd:string) "The area of axial mesoderm that develops into the prechordal plate.") AnnotationAssertion( "prechordal mesenchyme") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0034878") AnnotationAssertion(rdfs:label "prechordal mesoderm") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (juxtaglomerular arteriole) AnnotationAssertion( "compare with afferent arteriole") AnnotationAssertion( "EMAPA:27991") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0034884") AnnotationAssertion(rdfs:label "juxtaglomerular arteriole") SubClassOf( ) SubClassOf( ) # Class: (viscerocranial mucosa) AnnotationAssertion(Annotation( "FMA:59658") "Nonparenchymatous organ which consists of mucosae of the nose, mouth, pharyngotympanic tube, pharynx and larynx. Examples: There is only one viscerocranial mucosa.") AnnotationAssertion( "FMA:59658") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0034885") AnnotationAssertion(rdfs:label "viscerocranial mucosa") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (primary motor cortex layer 1) AnnotationAssertion( "NLX:152661") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NLX:152661") "primary motor cortex lamina 1") AnnotationAssertion(Annotation( "NLX:152661") "primary motor cortex lamina I") AnnotationAssertion( "UBERON:0034888") AnnotationAssertion(rdfs:label "primary motor cortex layer 1") SubClassOf( ) SubClassOf(Annotation( "NIFSTD"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "NIFSTD"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (posterior parietal cortex) AnnotationAssertion(Annotation( ) "The posterior parietal cortex is a portion of the parietal lobe which manipulates mental images, and integrates sensory and motor portions of the brain. Some sources say that it consists of Brodmann area 5 and Brodmann area 7. Other sources say it is only area 7.") AnnotationAssertion( ) AnnotationAssertion( "DHBA:10214") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "DHBA:10214") Annotation( ) "PoPC") AnnotationAssertion( "UBERON:0034889") AnnotationAssertion(rdfs:label "posterior parietal cortex") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "DHBA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (insular cortex) AnnotationAssertion(Annotation( "FMA:242223") Annotation( "FMA:CMA") Annotation( ) "iNS") AnnotationAssertion( ) AnnotationAssertion( "BM:Tel-Cx-Ins") AnnotationAssertion( "DHBA:10288") AnnotationAssertion( "DMBA:16058") AnnotationAssertion( "EMAPA:35432") AnnotationAssertion( "FMA:242223") AnnotationAssertion( "MA:0000909") AnnotationAssertion(Annotation( "FMA:242223") "cortex of insula") AnnotationAssertion(Annotation( "DHBA:10288") "insular neocortex") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "DHBA:10288") Annotation( ) "ICx") AnnotationAssertion(Annotation( "FMA:242223") "gray matter of insula") AnnotationAssertion( "UBERON:0034891") AnnotationAssertion(rdfs:label "insular cortex") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (granular insular cortex) AnnotationAssertion(Annotation( ) "Granular region of the insular cortex.") AnnotationAssertion( ) AnnotationAssertion( "BTO:0004341") AnnotationAssertion( "DHBA:10290") AnnotationAssertion(Annotation( "NeuroNames:1192") "granular insula") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:1192") "area Ig of Mesulam") AnnotationAssertion(Annotation( "NeuroNames:1192") Annotation( ) "cortex insularis granularis") AnnotationAssertion(Annotation( "NeuroNames:1192") "granular domain") AnnotationAssertion(Annotation( "NeuroNames:1192") "granular insula") AnnotationAssertion(Annotation( "NeuroNames:1192") "granular insular area") AnnotationAssertion(Annotation( "NeuroNames:1192") "granular insular cortex") AnnotationAssertion(Annotation( "NeuroNames:1192") "granular-isocortical insula") AnnotationAssertion(Annotation( "NeuroNames:1192") "insular isocortical belt") AnnotationAssertion(Annotation( "NeuroNames:1192") "visceral area") AnnotationAssertion( "UBERON:0034892") AnnotationAssertion(rdfs:label "granular insular cortex") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (agranular insular cortex) AnnotationAssertion(Annotation( ) "Agranular region of the insular cortex.") AnnotationAssertion( ) AnnotationAssertion( "BTO:0004342") AnnotationAssertion( "DHBA:10289") AnnotationAssertion( "DHBA:10328") AnnotationAssertion(Annotation( "DHBA:10289") "dysgranular insular cortex") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:1780") Annotation( ) "cortex insularis dysgranularis") AnnotationAssertion(Annotation( "NeuroNames:1780") "dysgranular insula") AnnotationAssertion(Annotation( "NeuroNames:1780") "dysgranular insular area") AnnotationAssertion(Annotation( "NeuroNames:1780") "dysgranular insular cortex") AnnotationAssertion(Annotation( "NeuroNames:1780") "gustatory area") AnnotationAssertion(Annotation( "NeuroNames:1780") "gustatory cortex") AnnotationAssertion( "UBERON:0034893") AnnotationAssertion(rdfs:label "agranular insular cortex") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lateral nucleus of stria terminalis) AnnotationAssertion( "DHBA:10386") AnnotationAssertion( "NLX:54921") AnnotationAssertion( "NLX:60319") AnnotationAssertion(Annotation( "DHBA:10386") "lateral subdivision of BNST") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NLX:54921") Annotation( ) "BSTL") AnnotationAssertion(Annotation( "NLX:54921") "lateral bed nucleus of stria terminalis") AnnotationAssertion(Annotation( "NLX:54921") "lateral bed nucleus of the stria terminalis") AnnotationAssertion( "UBERON:0034894") AnnotationAssertion(rdfs:label "lateral nucleus of stria terminalis") SubClassOf( ) SubClassOf(Annotation( "NIFSTD"^^xsd:string) ObjectSomeValuesFrom( )) DisjointClasses(Annotation( "lexical"^^xsd:string) ) # Class: (medial nucleus of stria terminalis) AnnotationAssertion( "DHBA:10385") AnnotationAssertion( "NLX:80623") AnnotationAssertion(Annotation( "DHBA:10385") "medial subdivision of BNST") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NLX:80623") Annotation( ) "BSTM") AnnotationAssertion(Annotation( "NLX:80623") "medial bed nucleus of stria terminalis") AnnotationAssertion(Annotation( "NLX:80623") "medial bed nucleus of the stria terminalis") AnnotationAssertion( "UBERON:0034895") AnnotationAssertion(rdfs:label "medial nucleus of stria terminalis") SubClassOf( ) SubClassOf(Annotation( "NIFSTD"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (ansa peduncularis) AnnotationAssertion( ) AnnotationAssertion( "DHBA:266441591") AnnotationAssertion( "FMA:62071") AnnotationAssertion( "MBA:892") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) "ansa peduncularis in thalamo") AnnotationAssertion(Annotation( "FMA:62071") "ansa peduncularis in thalamus") AnnotationAssertion(Annotation( "FMA:62071") "peduncular loop") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "DHBA:266441591") Annotation( ) "AP") AnnotationAssertion( "UBERON:0034896") AnnotationAssertion(rdfs:label "ansa peduncularis") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "DHBA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (alveolar ridge of premaxilla) AnnotationAssertion(Annotation( ) "The thickened ridge of bone that contains the tooth sockets on the premaxilla.") AnnotationAssertion( "AAO:0000397") AnnotationAssertion(Annotation( "AAO:0000397") "pars dentalis of premaxilla") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0034898") AnnotationAssertion(rdfs:label "alveolar ridge of premaxilla") SubClassOf( ) SubClassOf(Annotation( "AAO"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (palatine process of premaxilla) AnnotationAssertion(Annotation( "AAO:0000414") Annotation( "AAO:LAP") "Lingual ledge on the inner surface of the premaxilla.") AnnotationAssertion( "A posterior extension of the premaxilla that lies along the palatine and fuses to some extent with it. In the Passeres it may be fused, unfused, free or a lateral flange. Evolved multiple times in Passerines [http://www.biodiversitylibrary.org/part/29066]") AnnotationAssertion( "AAO:0000414") AnnotationAssertion(Annotation( "AAO:0000414") "pars palatina of premaxilla") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0034900") AnnotationAssertion(rdfs:label "palatine process of premaxilla") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (cervical sympathetic nerve trunk) AnnotationAssertion(Annotation( ) "The cervical ganglia are paravertebral ganglia of the sympathetic nervous system. These emerging postganglionic nerves synapse with preganglionic nerves from the thoracic spinal cord. They consist of three paravertebral ganglia: superior cervical ganglion middle cervical ganglion inferior cervical ganglion. The inferior ganglion may be fused with the first thoracic ganglion to form a single structure, the stellate ganglion. Nerves emerging from cervical sympathetic ganglia contribute to the cardiac plexus, among other things.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:6261") AnnotationAssertion(Annotation( "FMA:6261") "cervical part of sympathetic trunk") AnnotationAssertion(Annotation( "FMA:6261") "cervical sympathetic chain") AnnotationAssertion(Annotation( "FMA:6261") "cervical sympathetic trunk") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0034901") AnnotationAssertion(rdfs:label "cervical sympathetic nerve trunk") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (sacral sympathetic nerve trunk) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37656") AnnotationAssertion( "FMA:6264") AnnotationAssertion( "MA:0001164") AnnotationAssertion(Annotation( "FMA:6264") "sacral part of sympathetic trunk") AnnotationAssertion(Annotation( "FMA:6264") "sacral sympathetic chain") AnnotationAssertion(Annotation( "FMA:6264") "sacral sympathetic trunk") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "MA:0001164") "pelvic sympathetic nerve trunk") AnnotationAssertion( "pelvic sympathetic trunk") AnnotationAssertion( "UBERON:0034902") AnnotationAssertion(rdfs:label "sacral sympathetic nerve trunk") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (left atrium endocardium) AnnotationAssertion(Annotation( ) "Endocardium that is part of the left atrium.") AnnotationAssertion(Annotation( "FMA:7286") "Endocardium of atrium which is continuous with the tunica intima of the trunk of pulmonary vein.") AnnotationAssertion( ) AnnotationAssertion( "FMA:7286") AnnotationAssertion( "VHOG:0001226") AnnotationAssertion(Annotation( "FMA:7286") "endocardium of left atrium") AnnotationAssertion( "left atrial endocardium") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "VHOG:0001226") "left atrium endocardial tissue") AnnotationAssertion( "UBERON:0034903") AnnotationAssertion(rdfs:label "left atrium endocardium") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (gland lumen) AnnotationAssertion( "lumen of gland") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0034905") AnnotationAssertion(rdfs:label "gland lumen") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pineal parenchyma) AnnotationAssertion(Annotation( ) "Parenchymal tissue that forms the pineal gland.") AnnotationAssertion( ) AnnotationAssertion( "NCIT:C41834") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0034907") AnnotationAssertion(rdfs:label "pineal parenchyma") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (scapular muscle) AnnotationAssertion(Annotation( "HPO:curators") "Any of the muscles that are responsible for moving the scapula. In humans these are the levator scapulae, the infraspinatus muscle, the teres major, the teres minor, and the supraspinatus muscle.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0034908") AnnotationAssertion(rdfs:label "scapular muscle") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (intermaxillary suture) AnnotationAssertion(Annotation( ) Annotation( ) "A cranial suture in the midline of the skull that connects the left and right maxilla bones.") AnnotationAssertion( "FMA:52963") AnnotationAssertion(Annotation( "FMA:52963") "intermaxillary suture of skull") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0034909") AnnotationAssertion(rdfs:comment "in humans, the upper maxillae (the upper jaw) is composed of the right and left maxilla bones, which are fused in the midline at the intermaxillary suture to form the upper jaw.[https://orcid.org/0000-0001-5889-4463]") AnnotationAssertion(rdfs:label "intermaxillary suture") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (medial pretectal nucleus) AnnotationAssertion( ) AnnotationAssertion( "DHBA:12184") AnnotationAssertion( "DMBA:16585") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "DHBA:12184") Annotation( ) "MPT") AnnotationAssertion(Annotation( "DMBA:16585") Annotation( ) "MPT") AnnotationAssertion(Annotation( "NeuroNames:1176") "medial pretectal area") AnnotationAssertion(Annotation( "NeuroNames:1176") "medial pretectal nucleus") AnnotationAssertion( "UBERON:0034910") AnnotationAssertion(rdfs:label "medial pretectal nucleus") SubClassOf( ) SubClassOf( ) # Class: (anterior pretectal nucleus) AnnotationAssertion( "consider merging with olivary; however, Butler and Hodos treat as distinct within Eutherians") AnnotationAssertion( ) AnnotationAssertion( "DHBA:12187") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37920") AnnotationAssertion( "NLX:144456") AnnotationAssertion(Annotation( "DHBA:12187") "anterior (ventral /principal) pretectal nucleus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:1116") "anterior pretectal nucleus") AnnotationAssertion( "UBERON:0034918") AnnotationAssertion(rdfs:label "anterior pretectal nucleus") SubClassOf( ) SubClassOf( ) # Class: (juvenile stage) AnnotationAssertion(Annotation( ) Annotation( "Bgee:AN") "The stage of being no more dependent of the nest and/or from caregivers for subsistence while having not reach sexual maturity.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0034919") AnnotationAssertion(rdfs:label "juvenile stage") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (infant stage) AnnotationAssertion(Annotation( ) Annotation( "Bgee:AN") "Nursing stage that follows the neonate stage in mammals and ends at weaning.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0034920") AnnotationAssertion(rdfs:label "infant stage") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (multi organ part structure) AnnotationAssertion(Annotation( "CARO:0020001") "An multicellular anatomical structure that has subparts of multiple organs as a part.") AnnotationAssertion( "CARO:0020001") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "CARO:0020001") "anatomical cluster") AnnotationAssertion( "UBERON:0034921") AnnotationAssertion(rdfs:label "multi organ part structure") SubClassOf(Annotation( "CARO"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (cell cluster) AnnotationAssertion(Annotation( "CARO:0020002") "A cluster of cells, largely surrounded by a morphological boundary.") AnnotationAssertion( "CARO:0020002") AnnotationAssertion( "FMA:62807") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0034922") AnnotationAssertion(rdfs:label "cell cluster") SubClassOf(Annotation( "CARO"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (disconnected anatomical group) AnnotationAssertion(Annotation( "CARO:0020000") "Material anatomical entity consisting of multiple anatomical structures that are not connected to each other.") AnnotationAssertion( "CARO:0020000") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0034923") AnnotationAssertion(rdfs:label "disconnected anatomical group") SubClassOf(Annotation( "CARO"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectMinCardinality(2 )) # Class: (aligned anatomical group) AnnotationAssertion(Annotation( "CARO:0002002") "An anatomical group whose members are arranged in a line.") AnnotationAssertion( "CARO:0002002") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0034924") AnnotationAssertion(rdfs:comment "Examples include the rows of sense organs commonly found in the cuticles of insects.") AnnotationAssertion(rdfs:label "aligned anatomical group") SubClassOf(Annotation( "CARO"^^xsd:string) ) # Class: (anatomical collection) AnnotationAssertion(Annotation( ) "A collection of anatomical structures that are alike in terms of their morphology or developmental origin.") AnnotationAssertion( "resolve if this should be a subclass of disconnected anatomical group. Some collections (e.g. the skeleton or skull) are arguably connected") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0034925") AnnotationAssertion(rdfs:label "anatomical collection") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (anatomical row) AnnotationAssertion(Annotation( ) "An anatomical collection that is arranged in a line.") AnnotationAssertion( "resolve if this should be a subclass of or merged with aligned anatomical group.") AnnotationAssertion( "FBbt:00100152") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0034926") AnnotationAssertion(rdfs:label "anatomical row") SubClassOf( ) # Class: (arcuate artery of foot) AnnotationAssertion(Annotation( ) "The arcuate artery of the foot (metatarsal artery) arises a little anterior to the lateral tarsal artery; it passes lateralward, over the bases of the metatarsal bones, beneath the tendons of the Extensor digitorum brevis, its direction being influenced by its point of origin; and its anastomoses with the lateral tarsal and lateral plantar arteries. This vessel gives off the second, third, and fourth dorsal metatarsal arteries. It is not present in all individuals.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:44594") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0034927") AnnotationAssertion(rdfs:label "arcuate artery of foot") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (dorsal surface of penis) AnnotationAssertion( "FMA:19623") AnnotationAssertion(Annotation( "FMA:19623") "dorsum of penis") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) "dorsum penis") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0034928") AnnotationAssertion(rdfs:label "dorsal surface of penis") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (external soft tissue zone) AnnotationAssertion(Annotation( ) "A region or zone on the surface of an organism that encompasses skin and any adnexa, down through muscles and bounded by underlying skeletal support structures.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0034929") AnnotationAssertion(rdfs:label "external soft tissue zone") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (perforant path) AnnotationAssertion(Annotation( "MESH:A08.612.600") "A pathway of fibers originating in the lateral part of the entorhinal area, perforating the subiculum of the hippocampus, and running into the stratum moleculare of the hippocampus, where these fibers synapse with others that go to the dentate gyrus. (Dorland, 28th ed).") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "DHBA:12080") AnnotationAssertion( "HBA:265505250") AnnotationAssertion( "MBA:713") AnnotationAssertion( "MESH:D019580") AnnotationAssertion( "NCIT:C13084") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "DHBA:12080") Annotation( ) "perf") AnnotationAssertion(Annotation( "MESH:A08.612.600") "perforant path") AnnotationAssertion(Annotation( "MESH:A08.612.600") "perforant pathway") AnnotationAssertion(Annotation( "MESH:A08.612.600") "perforating fasciculus") AnnotationAssertion(Annotation( ) Annotation( ) "tractus perforans") AnnotationAssertion( "UBERON:0034931") AnnotationAssertion(rdfs:label "perforant path") SubClassOf( ) SubClassOf(Annotation( "HBA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "DHBA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (epithelium of biliary system) AnnotationAssertion(Annotation( ) Annotation( "BTO:0001513") Annotation( "MGI:cs") "The epithelial layer covering the biliary system. This includes the epithelium of the gallbladder (when present) as well as the intrahepatic and extrahepatic bile ducts.") AnnotationAssertion( "BTO:0001513") AnnotationAssertion(Annotation( ) "biliary system epithelium") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0001513") "biliary epithelium") AnnotationAssertion(Annotation( ) "biliary tract epithelium") AnnotationAssertion( "UBERON:0034932") AnnotationAssertion(rdfs:label "epithelium of biliary system") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (layer of smooth muscle tissue) AnnotationAssertion(Annotation( ) "Any organ component layer that consists of smooth muscle tissue.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0034933") AnnotationAssertion(rdfs:label "layer of smooth muscle tissue") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (Weber's gland) AnnotationAssertion(Annotation( "MGI:anna"^^xsd:string) Annotation( "PMCID:PMC2667924") "One of the lingual glands located on the lateral margins of the tongue, at the level of the foliate papillae and in the root of the tongue behind the circumvallate papillae.") AnnotationAssertion( "in humans, the ducts of posterior superficial lingual glands open into the crypts of lingual tonsils; mucous supplied by these glands may help to cleanse the crypts and aid in deglutition") AnnotationAssertion( "gland of Weber") AnnotationAssertion(Annotation( "MGI:anna"^^xsd:string) "posterior superficial lingual gland") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0034934") AnnotationAssertion(rdfs:label "Weber's gland") SubClassOf( ) SubClassOf( ) # Class: (pars plicata of ciliary body) AnnotationAssertion(Annotation( ) "Corrugated anterior region of ciliary body where ciliary processes arise.") AnnotationAssertion( ) AnnotationAssertion( "FMA:58431") AnnotationAssertion(Annotation( "FMA:58431") "ciliary crown") AnnotationAssertion(Annotation( "FMA:58431") "corona ciliaris") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0034935") AnnotationAssertion(rdfs:label "pars plicata of ciliary body") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (pars plana of ciliary body) AnnotationAssertion(Annotation( ) "Flattened posterior region of ciliary body.") AnnotationAssertion( ) AnnotationAssertion( "FMA:58480") AnnotationAssertion( "NCIT:C33219") AnnotationAssertion(Annotation( "FMA:58480") "ciliary ring") AnnotationAssertion(Annotation( "FMA:58480") "orbiculus ciliaris") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0034936") AnnotationAssertion(rdfs:label "pars plana of ciliary body") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (venous sinus cavity) AnnotationAssertion(Annotation( "GOC:YMB") Annotation( "ZFA:0007073") "An enlarged chamber in the blood sinus capable of accumulating a large volume of blood.") AnnotationAssertion( "ZFA:0007073") AnnotationAssertion(Annotation( "ZFA:0007073") "blood sinus cavity") AnnotationAssertion(Annotation( "ZFA:0007073") "blood sinus lumen") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0034940") AnnotationAssertion(rdfs:label "venous sinus cavity") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (zone of organ) AnnotationAssertion( "FMA:55268") AnnotationAssertion(Annotation( "FMA:55268") "organ sector") AnnotationAssertion( "organ zonal region") AnnotationAssertion(Annotation( "FMA:55268") "organ zone") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:55268") "organ region with floating fiat boundary") AnnotationAssertion( "UBERON:0034944") AnnotationAssertion(rdfs:label "zone of organ") SubClassOf( ) # Class: (excreted gas) AnnotationAssertion(Annotation( ) "Any gaseous product of an excretory process.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0034945") AnnotationAssertion(rdfs:label "excreted gas") SubClassOf( ) SubClassOf( ) # Class: (gas excreted from digestive tract) AnnotationAssertion(Annotation( ) "Any excreted gas that is produced by the digestive tract.") AnnotationAssertion( "FMA:78440") AnnotationAssertion(Annotation( "FMA:78440") "flatulence") AnnotationAssertion(Annotation( ) Annotation( ) "flatus") AnnotationAssertion( "intestinal gas") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0034946") AnnotationAssertion(rdfs:comment "In mammals, mostly produced as a byproduct of bacterial fermentation in the gastrointestinal (GI) tract, especially the colon, and excreted through the rectum") AnnotationAssertion(rdfs:label "gas excreted from digestive tract") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (gas in respiratory system) AnnotationAssertion(Annotation( ) "Any portion of gas located in a part of the respiratory system.") AnnotationAssertion( "respiratory gas") AnnotationAssertion( "respiratory system gas") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0034947") AnnotationAssertion(rdfs:label "gas in respiratory system") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (carbon dioxide in respiratory system) AnnotationAssertion(Annotation( ) "Any portion of gas located in a part of the respiratory system that is composed primarily of carbon dioxide.") AnnotationAssertion( "respiratory CO2") AnnotationAssertion( "respiratory system CO2") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0034948") AnnotationAssertion(rdfs:label "carbon dioxide in respiratory system") SubClassOf( ) # Class: (lymphatic valve) AnnotationAssertion( "FMA:68454") AnnotationAssertion(Annotation( "FMA:68454") "lymphatic vessel valve") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0034949") AnnotationAssertion(rdfs:label "lymphatic valve") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (embryonic lymph sac) AnnotationAssertion(Annotation( ) Annotation( ) "A population of lymphatic endothelial cell precursors that will form the lymph vessels.") AnnotationAssertion( ) AnnotationAssertion( "NCIT:C34262") AnnotationAssertion( "uberon") AnnotationAssertion( "primary lymph sac") AnnotationAssertion( "UBERON:0034953") AnnotationAssertion(rdfs:label "embryonic lymph sac") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "VHOG"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (retroperitoneal embryonic lymph sac) AnnotationAssertion(Annotation( ) Annotation( ) "An embryonic lymph sac that forms in the root of the mesentery on the posterior abdominal wall.") AnnotationAssertion( ) AnnotationAssertion( "NCIT:C34285") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0034958") AnnotationAssertion(rdfs:label "retroperitoneal embryonic lymph sac") SubClassOf( ) # Class: (lateral fornix of vagina) AnnotationAssertion(Annotation( ) "The vaginal fornix that is to the side of the cervix.") AnnotationAssertion( "FMA:19988") AnnotationAssertion(Annotation( "FMA:19988") "lateral part of fornix of vagina") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) Annotation( ) "pars lateralis fornicis vaginae") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0034963") AnnotationAssertion(rdfs:label "lateral fornix of vagina") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (superficial epigastric artery) AnnotationAssertion(Annotation( ) Annotation( ) "An artery that arises from the femoral artery and supplies the abdominal wall. It distributes branches to the superficial subinguinal lymph glands, the superficial fascia, and the integument; it anastomoses with branches of the inferior epigastric, and with its fellow of the opposite side.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:20734") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0034964") AnnotationAssertion(rdfs:label "superficial epigastric artery") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (middle thyroid vein) AnnotationAssertion(Annotation( ) "The middle thyroid vein collects the blood from the lower part of the thyroid gland, and after being joined by some veins from the larynx and trachea, ends in the lower part of the internal jugular vein.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:50823") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0034965") AnnotationAssertion(rdfs:label "middle thyroid vein") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) # Class: (sagittal sulcus) AnnotationAssertion(Annotation( ) Annotation( ) "A sulcus that lies within the longitudinal fissure.") AnnotationAssertion( ) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0034968") AnnotationAssertion(rdfs:label "sagittal sulcus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (epithelial layer of duct) AnnotationAssertion( ) AnnotationAssertion( "NCIT:C25787") AnnotationAssertion( "uberon") AnnotationAssertion( "duct epithelium") AnnotationAssertion( "ductal epithelium") AnnotationAssertion( "UBERON:0034969") AnnotationAssertion(rdfs:label "epithelial layer of duct") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (aortic body) AnnotationAssertion(Annotation( ) "One of several small clusters of chemoreceptors, baroreceptors, and supporting cells located along the aortic arch.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "NCIT:C97112") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "Zuckerkandl's body") AnnotationAssertion(Annotation( ) Annotation( ) "aortic bodies") AnnotationAssertion(Annotation( ) Annotation( ) "aortic glands") AnnotationAssertion( "UBERON:0034971") AnnotationAssertion(rdfs:label "aortic body") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (jugular body) AnnotationAssertion(Annotation( "MESH:A08.800.550.700.120.600.350") "A nonchromaffin paraganglion located in the wall of the jugular bulb.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:50848") AnnotationAssertion( "MESH:A08.800.550.700.120.600.350") AnnotationAssertion( "glomus jugulare") AnnotationAssertion( "glomus tympanicum") AnnotationAssertion(Annotation( "FMA:50848") "jugulotympanic body") AnnotationAssertion(Annotation( "FMA:50848") "tympanic body") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0034972") AnnotationAssertion(rdfs:label "jugular body") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "cjm"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (paraganglion (generic)) AnnotationAssertion(Annotation( ) Annotation( ) "A cluster of neuroendocrine cells derived from neural crest. Paraganglia may be chromaffin or nonchromaffin.") AnnotationAssertion( "corresponding portion of CL needs fixed") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:15648") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "paraganglia") AnnotationAssertion( "UBERON:0034978") AnnotationAssertion(rdfs:label "paraganglion (generic)") SubClassOf(Annotation( "cjm"^^xsd:string) ) SubClassOf( ) SubClassOf(Annotation( "Wikipedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (nonchromaffin paraganglion) AnnotationAssertion(Annotation( ) Annotation( "MESH:A08.800.550.700.120.600") "A cluster of chemoreceptive and support cells associated with blood vessels and nerves.") AnnotationAssertion( "MESH:A08.800.550.700.120.600") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0034979") AnnotationAssertion(rdfs:label "nonchromaffin paraganglion") SubClassOf( ) # Class: (jugular bulb) AnnotationAssertion( "bulb of jugular vein") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0034980") AnnotationAssertion(rdfs:label "jugular bulb") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (superior bulb of internal jugular vein) AnnotationAssertion( ) AnnotationAssertion( "FMA:50805") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) "bulbus superior venae jugularis") AnnotationAssertion(Annotation( "FMA:50805") "superior bulb of jugular vein") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0034981") AnnotationAssertion(rdfs:label "superior bulb of internal jugular vein") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (inferior bulb of internal jugular vein) AnnotationAssertion( ) AnnotationAssertion( "FMA:50807") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) "bulbus inferior venae jugularis") AnnotationAssertion(Annotation( "FMA:50807") "inferior bulb of jugular vein") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0034982") AnnotationAssertion(rdfs:label "inferior bulb of internal jugular vein") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (ischial tuberosity) AnnotationAssertion(Annotation( "MURDOCH:1034") "A horizontal thickening onto which the muscles of the femur, such as the quadriceps and hamstring, attach.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:17010") AnnotationAssertion( "NCIT:C105446") AnnotationAssertion(Annotation( "FMA:17010") "tuber ischiale") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "ischial tuberosities") AnnotationAssertion(Annotation( ) "ischial tuberosity") AnnotationAssertion(Annotation( ) "tuber ischiadicum") AnnotationAssertion( "UBERON:0034983") AnnotationAssertion(rdfs:label "ischial tuberosity") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (nerve to quadratus femoris) AnnotationAssertion(Annotation( ) "The nerve to quadratus femoris is a nerve that provides innervation to the quadratus femoris and gemellus inferior muscles.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:78705") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "nerve to quadratus femoris") AnnotationAssertion(Annotation( ) "nerve to the quadratus femoris") AnnotationAssertion(Annotation( ) "nerve to the quadratus femoris and gemellus inferior") AnnotationAssertion(Annotation( ) "nerve to the quadratus femoris muscle") AnnotationAssertion( "UBERON:0034984") AnnotationAssertion(rdfs:label "nerve to quadratus femoris") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (sacral nerve plexus) AnnotationAssertion(Annotation( ) "A nerve plexus which provides motor and sensory nerves for the posterior thigh, most of the lower leg, the entire foot, and part of the pelvis.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:5909") AnnotationAssertion( "NCIT:C12846") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) "plexus sacralis") AnnotationAssertion(Annotation( "FMA:5909") "sacral plexus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "plexus sacralis") AnnotationAssertion( "UBERON:0034986") AnnotationAssertion(rdfs:label "sacral nerve plexus") SubClassOf( ) # Class: (lumbar nerve plexus) AnnotationAssertion(Annotation( ) "A nervous plexus in the lumbar region of the body which forms part of the lumbosacral plexus.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:5908") AnnotationAssertion( "NCIT:C12845") AnnotationAssertion(Annotation( "FMA:5908") "lumbar plexus") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) "plexus lumbalis") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "femoral plexus") AnnotationAssertion(Annotation( ) "plexus lumbalis") AnnotationAssertion( "UBERON:0034987") AnnotationAssertion(rdfs:label "lumbar nerve plexus") SubClassOf( ) # Class: (tendon of obturator internus) AnnotationAssertion( ) AnnotationAssertion( "FMA:22300") AnnotationAssertion(Annotation( "FMA:22300") "obturator internus tendon") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:22300") "tendon of obturator internus muscle") AnnotationAssertion( "UBERON:0034988") AnnotationAssertion(rdfs:label "tendon of obturator internus") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (amygdalopiriform transition area) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:35125") AnnotationAssertion( "FMA:77608") AnnotationAssertion( "MA:0002918") AnnotationAssertion( "PBA:10140") AnnotationAssertion(Annotation( "NeuroNames:1971") "postpiriform transition area") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:1971") "amygdalopiriform TA") AnnotationAssertion(Annotation( "NeuroNames:1971") "amygdalopiriform transition area") AnnotationAssertion(Annotation( "NeuroNames:1971") "postpiriform transition area") AnnotationAssertion( "UBERON:0034989") AnnotationAssertion(rdfs:label "amygdalopiriform transition area") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "MA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (anterior cortical amygdaloid nucleus) AnnotationAssertion( ) AnnotationAssertion( "DMBA:16000") AnnotationAssertion( "EMAPA:35128") AnnotationAssertion( "MA:0002920") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "DMBA:16000") "anterior cortical amygdaloid area") AnnotationAssertion( "UBERON:0034991") AnnotationAssertion(rdfs:label "anterior cortical amygdaloid nucleus") SubClassOf( ) SubClassOf(Annotation( "EMAPA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "DMBA") ObjectSomeValuesFrom( )) # Class: (basal ventral medial nucleus of thalamus) AnnotationAssertion( "EMAPA:35165") AnnotationAssertion( "FMA:84344") AnnotationAssertion( "HBA:4427") AnnotationAssertion(Annotation( "EMAPA:35165") "basal ventral medial thalamic nucleus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0034993") AnnotationAssertion(rdfs:label "basal ventral medial nucleus of thalamus") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "HBA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EMAPA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (hindbrain cortical intermediate zone) AnnotationAssertion( "DHBA:12682") AnnotationAssertion( "EMAPA:32917") AnnotationAssertion(Annotation( "EMAPA:32917") "hindbrain mantle layer") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0034994") AnnotationAssertion(rdfs:label "hindbrain cortical intermediate zone") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (jaw mesenchyme) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "Mesenchyme that is part of a developing jaw [Automatically generated definition].") AnnotationAssertion( "EMAPA:32907") AnnotationAssertion( "EMAPA:35454") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0034995") AnnotationAssertion(rdfs:label "jaw mesenchyme") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (outer renal medulla loop of Henle) AnnotationAssertion( "EMAPA:28322") AnnotationAssertion(Annotation( "EMAPA:28322") "loop of Henle, outer medullary portion") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0034996") AnnotationAssertion(rdfs:label "outer renal medulla loop of Henle") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (renal medulla loop of Henle) AnnotationAssertion( "EMAPA:35460") AnnotationAssertion(Annotation( "EMAPA:35460") "loop of Henle of renal medulla") AnnotationAssertion( "loop of Henle, medullary portion") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0034997") AnnotationAssertion(rdfs:label "renal medulla loop of Henle") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (posterolateral cortical amygdaloid nucleus) AnnotationAssertion( ) AnnotationAssertion( "DMBA:15999") AnnotationAssertion( "EMAPA:35699") AnnotationAssertion( "MA:0002929") AnnotationAssertion(Annotation( "DMBA:15999") "posterolateral cortical amygdaloid area") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "DMBA:15999") Annotation( ) "PLCo") AnnotationAssertion(Annotation( "NeuroNames:3249") "cortical amygdalar nucleus, posterior part, lateral zone") AnnotationAssertion(Annotation( "NeuroNames:3249") "posterolateral cortical amygdalar nucleus") AnnotationAssertion(Annotation( "NeuroNames:3249") "posterolateral cortical amygdaloid area") AnnotationAssertion(Annotation( "NeuroNames:3249") "posterolateral part of the cortical nucleus") AnnotationAssertion( "UBERON:0034999") AnnotationAssertion(rdfs:label "posterolateral cortical amygdaloid nucleus") SubClassOf( ) SubClassOf(Annotation( "EMAPA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (posteromedial cortical amygdaloid nucleus) AnnotationAssertion( ) AnnotationAssertion( "DMBA:15950") AnnotationAssertion( "EMAPA:35700") AnnotationAssertion( "MA:0002930") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "DMBA:15950") Annotation( ) "PMCo") AnnotationAssertion(Annotation( "NeuroNames:3250") "cortical amygdalar nucleus, posterior part, medial zone") AnnotationAssertion(Annotation( "NeuroNames:3250") "posteromedial cortical amygdalar nucleus") AnnotationAssertion(Annotation( "NeuroNames:3250") "posteromedial cortical amygdaloid nucleus") AnnotationAssertion(Annotation( "NeuroNames:3250") "posteromedial part of the cortical nucleus") AnnotationAssertion( "UBERON:0035001") AnnotationAssertion(rdfs:label "posteromedial cortical amygdaloid nucleus") SubClassOf( ) SubClassOf(Annotation( "EMAPA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (preputial swelling) AnnotationAssertion( "EMAPA:35702") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035004") AnnotationAssertion(rdfs:label "preputial swelling") SubClassOf( ) SubClassOf(Annotation( "EMAPA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (preputial swelling of male) AnnotationAssertion( "EMAPA:29220") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "EMAPA:29220") "prepuce of male") AnnotationAssertion( "UBERON:0035005") AnnotationAssertion(rdfs:label "preputial swelling of male") SubClassOf( ) SubClassOf(Annotation( "EMAPA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (preputial swelling of female) AnnotationAssertion( "EMAPA:30478") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "EMAPA:30478") "prepuce of female") AnnotationAssertion( "UBERON:0035006") AnnotationAssertion(rdfs:label "preputial swelling of female") SubClassOf( ) SubClassOf(Annotation( "EMAPA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (nasal concha cartilage) AnnotationAssertion(Annotation( "EMAPA"^^xsd:string) "represented as a primordium in EMAPA - should be cartilage condensation") AnnotationAssertion( "EMAPA:35890") AnnotationAssertion( "turbinal cartilage") AnnotationAssertion(Annotation( "EMAPA:35890") "turbinate bone primordium") AnnotationAssertion( "turbinate cartilage condensation") AnnotationAssertion( "unossified nasal turbinal") AnnotationAssertion( "unossified nasal turbinate") AnnotationAssertion( "unossified turbinate") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035007") AnnotationAssertion(rdfs:label "nasal concha cartilage") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (central gray substance) AnnotationAssertion( ) AnnotationAssertion( "FMA:83134") AnnotationAssertion(Annotation( "FMA:83134") "central grey substance") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) "substantia grisea centralis") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:1584") "central gray") AnnotationAssertion(Annotation( "NeuroNames:1584") "central gray substance") AnnotationAssertion(Annotation( "NeuroNames:1584") "central grey") AnnotationAssertion(Annotation( "NeuroNames:1584") Annotation( ) "griseum centrale") AnnotationAssertion(Annotation( "NeuroNames:1584") Annotation( ) "griseum periventriculare") AnnotationAssertion(Annotation( "NeuroNames:1584") Annotation( ) "stratum griseum centrale") AnnotationAssertion(Annotation( "NeuroNames:1584") Annotation( ) "substantia grisea centralis") AnnotationAssertion( "UBERON:0035011") AnnotationAssertion(rdfs:label "central gray substance") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (temporal cortex association area) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:35852") AnnotationAssertion( "MA:0000943") AnnotationAssertion( "MBA:541") AnnotationAssertion( "uberon") AnnotationAssertion( "temporal association area") AnnotationAssertion(Annotation( "NeuroNames:1821") "temporal association areas") AnnotationAssertion(Annotation( "NeuroNames:1821") "temporal association cortex") AnnotationAssertion(Annotation( "NeuroNames:1821") "ventral temporal association areas") AnnotationAssertion( "UBERON:0035013") AnnotationAssertion(rdfs:label "temporal cortex association area") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (functional part of brain) AnnotationAssertion(Annotation( "NLX:155513") "A brain region defined by functional criteria, e.g. auditory cortex, rather than by structural or histological criteria.") AnnotationAssertion( "NLX:155513") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035014") AnnotationAssertion(rdfs:label "functional part of brain") SubClassOf(Annotation( "NIFSTD"^^xsd:string) ) # Class: (association cortex) AnnotationAssertion(Annotation( "NIFSTD:oen_0001107") "Region of the cerebral cortex that integrates diverse sensory or motor information for purposeful action.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NIFSTD:oen_0001107") "association area") AnnotationAssertion(Annotation( "NeuroNames:1348") "association areas of cortex") AnnotationAssertion(Annotation( "NeuroNames:1348") "association cortex") AnnotationAssertion(Annotation( "NeuroNames:1348") "cortical association areas") AnnotationAssertion( "UBERON:0035015") AnnotationAssertion(rdfs:label "association cortex") SubClassOf(Annotation( "NIFSTD"^^xsd:string) ) # Class: (tactile mechanoreceptor) AnnotationAssertion( "FMA:85595") AnnotationAssertion(Annotation( "FMA:85595") "contact receptor") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035016") AnnotationAssertion(rdfs:label "tactile mechanoreceptor") SubClassOf( ) # Class: (nociceptor) AnnotationAssertion(Annotation( "MESH:A08.800.550.700.650") "Peripheral receptors for pain. Nociceptors include receptors which are sensitive to painful mechanical stimuli, extreme heat or cold, and chemical stimuli. All nociceptors are free nerve endings.") AnnotationAssertion( "MESH:A08.800.550.700.650") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "MESH:A08.800.550.700.650") "nociceptor") AnnotationAssertion(Annotation( "MESH:A08.800.550.700.650") "pain receptor") AnnotationAssertion( "UBERON:0035017") AnnotationAssertion(rdfs:label "nociceptor") SubClassOf( ) # Class: (thermoreceptor) AnnotationAssertion(Annotation( "MESH:A08.800.550.700.840") "Cellular receptors which mediate the sense of temperature. Thermoreceptors in vertebrates are mostly located under the skin. In mammals there are separate types of thermoreceptors for cold and for warmth and NOCICEPTORS which detect cold or heat extreme enough to cause pain.") AnnotationAssertion( ) AnnotationAssertion( "MESH:A08.800.550.700.840") AnnotationAssertion( "NCIT:C13822") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "MESH:A08.800.550.700.840") "thermoreceptor") AnnotationAssertion( "UBERON:0035018") AnnotationAssertion(rdfs:label "thermoreceptor") SubClassOf( ) # Class: (inferior olive, beta nucleus) AnnotationAssertion( ) AnnotationAssertion( "DHBA:12602") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37611") AnnotationAssertion( "MA:0001041") AnnotationAssertion(Annotation( "MA:0001041") "inferior olive beta subnucleus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "DHBA:12602") Annotation( ) "IOBe") AnnotationAssertion(Annotation( "NeuroNames:1755") "beta subnucleus of the inferior olive") AnnotationAssertion(Annotation( "NeuroNames:1755") "inferior olive, beta subnucleus") AnnotationAssertion( "UBERON:0035019") AnnotationAssertion(rdfs:label "inferior olive, beta nucleus") SubClassOf( ) # Class: (left vagus X nerve trunk) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37798") AnnotationAssertion( "FMA:18157") AnnotationAssertion( "MA:0001151") AnnotationAssertion(Annotation( "FMA:18157") "left vagus neural trunk") AnnotationAssertion(Annotation( "FMA:18157") "trunk of left vagus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "MA:0001151") "anterior vagus X nerve trunk") AnnotationAssertion( "UBERON:0035020") AnnotationAssertion(rdfs:label "left vagus X nerve trunk") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (right vagus X nerve trunk) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37799") AnnotationAssertion( "FMA:18151") AnnotationAssertion( "MA:0001152") AnnotationAssertion(Annotation( "FMA:18151") "right vagus neural trunk") AnnotationAssertion(Annotation( "FMA:18151") "trunk of right vagus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "MA:0001152") "posterior vagus X nerve trunk") AnnotationAssertion( "UBERON:0035021") AnnotationAssertion(rdfs:label "right vagus X nerve trunk") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (trunk of segmental spinal nerve) AnnotationAssertion( "MA:0001179") AnnotationAssertion(Annotation( "MA:0001179") "segmental spinal nerve trunk") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035022") AnnotationAssertion(rdfs:label "trunk of segmental spinal nerve") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lateral spinal nucleus) AnnotationAssertion( ) AnnotationAssertion( "DMBA:17690") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37634") AnnotationAssertion( "MA:0002756") AnnotationAssertion( "NLX:144473") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035024") AnnotationAssertion(rdfs:label "lateral spinal nucleus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (amygdalohippocampal transition area) AnnotationAssertion( "DHBA:10380") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "DHBA:10380") Annotation( ) "AHTA") AnnotationAssertion( "UBERON:0035026") AnnotationAssertion(rdfs:label "amygdalohippocampal transition area") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (amygdalohippocampal area, magnocellular division) AnnotationAssertion( "HBA:265504452") AnnotationAssertion( "PBA:10136") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "HBA:265504452") Annotation( ) "AHiAm") AnnotationAssertion( "UBERON:0035027") AnnotationAssertion(rdfs:label "amygdalohippocampal area, magnocellular division") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (amygdalohippocampal area, parvocellular division) AnnotationAssertion( "HBA:265504456") AnnotationAssertion( "PBA:10137") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "HBA:265504456") Annotation( ) "AHiAp") AnnotationAssertion( "UBERON:0035028") AnnotationAssertion(rdfs:label "amygdalohippocampal area, parvocellular division") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (abdominal oblique muscle) AnnotationAssertion(Annotation( "UBERON:cjm"^^xsd:string) "Either the external or internal abdominal oblique muscles.") AnnotationAssertion( "EMAPA:35603") AnnotationAssertion( "MA:0003024") AnnotationAssertion(Annotation( "MA:0003024") "oblique abdominal muscle") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035032") AnnotationAssertion(rdfs:label "abdominal oblique muscle") SubClassOf(Annotation( "true"^^xsd:string) ) # Class: (eyelid epithelium) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An epithelium that is part of an eyelid [Automatically generated definition].") AnnotationAssertion( "EMAPA:32758") AnnotationAssertion( "MA:0003163") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035034") AnnotationAssertion(rdfs:label "eyelid epithelium") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (naris epithelium) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An epithelium that is part of a naris [Automatically generated definition].") AnnotationAssertion( "EMAPA:35959") AnnotationAssertion( "MA:0003172") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035036") AnnotationAssertion(rdfs:label "naris epithelium") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (jaw epithelium) AnnotationAssertion( "EMAPA:32904") AnnotationAssertion( "MA:0003220") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035037") AnnotationAssertion(rdfs:label "jaw epithelium") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (carpal tunnel) AnnotationAssertion(Annotation( ) "The fibro-osseous passageway on the palmar side of the wrist that connects the distal forearm to the middle compartment of the deep plane of the palm.") AnnotationAssertion( ) AnnotationAssertion( "FMA:42352") AnnotationAssertion(Annotation( "FMA:42352") "carpal canal") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "carpel tunnel") AnnotationAssertion( "UBERON:0035038") AnnotationAssertion(rdfs:label "carpal tunnel") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (rectal artery) AnnotationAssertion( ) AnnotationAssertion( "hemorrhoidal artery") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035039") AnnotationAssertion(rdfs:label "rectal artery") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (superior rectal artery) AnnotationAssertion(Annotation( ) "The superior rectal artery (superior hemorrhoidal artery) is an artery that descends into the pelvis to supply blood to the rectum.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:14832") AnnotationAssertion( "NCIT:C33677") AnnotationAssertion(Annotation( "FMA:14832") "superior hemorrhoidal artery") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "superior hemorrhoidal") AnnotationAssertion(Annotation( ) "superior hemorrhoidal artery") AnnotationAssertion(Annotation( ) "superior rectal") AnnotationAssertion( "UBERON:0035040") AnnotationAssertion(rdfs:label "superior rectal artery") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (deep temporal artery) AnnotationAssertion(Annotation( ) "The deep temporal arteries, two in number, anterior and posterior, ascend between the Temporalis and the pericranium. They supply the muscle, and anastomose with the middle temporal artery. The anterior communicates with the lacrimal artery by means of small branches which perforate the zygomatic bone and great wing of the sphenoid.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:49742") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "anterior deep temporal artery") AnnotationAssertion(Annotation( ) "deep temporal arteries") AnnotationAssertion(Annotation( ) "deep temporal artery") AnnotationAssertion(Annotation( ) "deep temporal branches") AnnotationAssertion(Annotation( ) "posterior deep temporal artery") AnnotationAssertion( "UBERON:0035041") AnnotationAssertion(rdfs:label "deep temporal artery") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (middle temporal artery) AnnotationAssertion(Annotation( ) "The middle temporal artery arises immediately above the zygomatic arch, and, perforating the temporal fascia, gives branches to the Temporalis, anastomosing with the deep temporal branches of the internal maxillary. It occasionally gives off a zygomaticoC6rbital branch, which runs along the upper border of the zygomatic arch, between the two layers of the temporal fascia, to the lateral angle of the orbit.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:49666") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "middle temporal artery") AnnotationAssertion( "UBERON:0035042") AnnotationAssertion(rdfs:label "middle temporal artery") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (temporal branch of lateral pretrosal artery) AnnotationAssertion(Annotation( "AAO:0010495") "Part of lateral pretrosal artery which supplies blood to the eyelids.") AnnotationAssertion(Annotation( "AAO:0010495") "temporal artery") AnnotationAssertion( "AAO:0010495") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035043") AnnotationAssertion(rdfs:label "temporal branch of lateral pretrosal artery") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (olfactory cortex layer 3) AnnotationAssertion(Annotation( "NLX:152611") "Deepest layer of olfactory cortex.") AnnotationAssertion( "NLX:152611") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035044") AnnotationAssertion(rdfs:label "olfactory cortex layer 3") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "nlx") ObjectSomeValuesFrom( )) SubClassOf(Annotation( "NIFSTD"^^xsd:string) ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) SubClassOf( ObjectSomeValuesFrom( )) # Class: (parotid gland intralobular duct) AnnotationAssertion(Annotation( "MP:0013746") "Any of the tubular canals of the parotid gland located within the parenchymal (secretory) tissue i.e. within lobules; both intercalated and striated (secretory) ducts are intralobular ducts.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035045") AnnotationAssertion(rdfs:label "parotid gland intralobular duct") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (parotid gland intercalated duct) AnnotationAssertion(Annotation( "MP:0013747") "Any of the small intralobular tubular canal that leads directly from the serous acinus of the parotid gland to a striated (secretory) duct; in mouse, the intercalated ducts are short and narrow and are lined by low cuboidal epithelial cells with large central nuclei; they secrete bicarbonate ion into and absorb chloride ion from the acinar product.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035046") AnnotationAssertion(rdfs:label "parotid gland intercalated duct") SubClassOf( ) SubClassOf( ) # Class: (parotid gland striated duct) AnnotationAssertion(Annotation( "MP:0013748") "Any of the intralobular secretory duct of the parotid gland which connects an intercalated duct to an interlobular excretory duct; striated ducts are lined by cuboidal to columnar acidophilic cells and are so-named because of characteristic striations in the basal portions of the cells which are due to the alignment of mitochondria between deep infoldings of the basal cell membrane; the nucleus is in the central part of the cell above the striations; as they approach the excretory ducts, their diameter may exceed that of the acini; striated ducts reabsorb sodium and secrete potassium.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035047") AnnotationAssertion(rdfs:label "parotid gland striated duct") SubClassOf( ) SubClassOf( ) # Class: (parotid gland excretory duct) AnnotationAssertion(Annotation( "MP:0013750") "Any of the interlobular excretory ducts of the parotid gland which are found in the connective tissue septa and formed by the union of several intralobular striated (secretory) ducts; ultimately, the excretory ducts of the parotid gland coalesce and form a single main excretory duct (Stensen's duct) that opens into the oral cavity; excretory ducts do not change the secretory product.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035048") AnnotationAssertion(rdfs:label "parotid gland excretory duct") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (excretory duct of salivary gland) AnnotationAssertion(Annotation( "MP:0013750") "Any of the interlobular excretory ducts of a salivary gland which are found in the connective tissue septa and formed by the union of several intralobular striated (secretory) ducts[MP,generalized].") AnnotationAssertion( "FMA:60052") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035049") AnnotationAssertion(rdfs:label "excretory duct of salivary gland") SubClassOf( ) SubClassOf( ) # Class: (excretory duct) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035050") AnnotationAssertion(rdfs:label "excretory duct") SubClassOf( ) # Class: (interlobular duct of salivary gland) AnnotationAssertion( "FMA:60053") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035053") AnnotationAssertion(rdfs:label "interlobular duct of salivary gland") SubClassOf( ) SubClassOf( ) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (duct of eccrine sweat gland) AnnotationAssertion( "FMA:70617") AnnotationAssertion(Annotation( "FMA:70617") "ductal part of eccrine sweat gland") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035073") AnnotationAssertion(rdfs:label "duct of eccrine sweat gland") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (duct of apocrine sweat gland) AnnotationAssertion( "FMA:70643") AnnotationAssertion(Annotation( "FMA:70643") "ductal part of apocrine sweat gland") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035074") AnnotationAssertion(rdfs:label "duct of apocrine sweat gland") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (thymus subunit) AnnotationAssertion( "FMA:71193") AnnotationAssertion( "uberon") AnnotationAssertion( "lobe or lobule of thymus") AnnotationAssertion( "UBERON:0035075") AnnotationAssertion(rdfs:label "thymus subunit") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (parotid gland myoepithelium) AnnotationAssertion(Annotation( "MGI:anna"^^xsd:string) "Epithelium that consists of stellate-shaped contractile cells with long dendritic processes that surround the secretory acini and intercalated ducts of the parotid gland, usually found in the glandular epithelium as a thin layer above the basement membrane but generally beneath the luminal cells; they display features of both smooth muscle and epithelium, such as numerous microfilaments with focal densities in the cytoplasmic processes, and desmosomes which attach them to the epithelial cells; their functions include contraction when the gland is stimulated to secrete, compressing or reinforcing the underlying parenchymal cells, thus aiding in the expulsion of saliva and preventing damage to the other cells.") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37934") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035076") AnnotationAssertion(rdfs:label "parotid gland myoepithelium") SubClassOf( ) SubClassOf( ) # Class: (parotid gland interlobular duct) AnnotationAssertion(Annotation( "MP:0013749") "Any of the excretory ducts of the parotid gland which are found in the connective tissue septa i.e. between lobules.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035078") AnnotationAssertion(rdfs:label "parotid gland interlobular duct") SubClassOf( ) SubClassOf( ) # Class: (deep intraparotid lymph node) AnnotationAssertion(Annotation( ) "The intraglandular deep parotid lymph nodes are a group of lymph nodes found inside the parotid gland.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "deep intraparotid node") AnnotationAssertion( "intraglandular deep parotid lymph nodes") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035079") AnnotationAssertion(rdfs:label "deep intraparotid lymph node") SubClassOf( ) # Class: (intraparotid lymph node) AnnotationAssertion( "requires review. Various subtypes include intraglandular, paraglandular, paraparotid") AnnotationAssertion( ) AnnotationAssertion( "intraparotid node") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035080") AnnotationAssertion(rdfs:label "intraparotid lymph node") SubClassOf( ) # Class: (transverse process-bearing vertebra) AnnotationAssertion(Annotation( ) "A vertebra that has a transverse process.") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "TP vertebra") AnnotationAssertion(Annotation( ) "pygal vertebra") AnnotationAssertion( "UBERON:0035083") AnnotationAssertion(rdfs:label "transverse process-bearing vertebra") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses( ) # Class: (non-transverse process-bearing vertebra) AnnotationAssertion(Annotation( ) "A vertebra that does not have a transverse process.") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "NTP vertebra") AnnotationAssertion(Annotation( ) "postpygal vertebra") AnnotationAssertion( "UBERON:0035084") AnnotationAssertion(rdfs:label "non-transverse process-bearing vertebra") SubClassOf( ) # Class: (anatomical plane) AnnotationAssertion(Annotation( ) Annotation( ) Annotation( "CARO:0001013") Annotation( "FMA:242982") "A flat anatomical 2D surface that bisects an anatomical structure or an anatomical space.") AnnotationAssertion( "CARO:0001013") AnnotationAssertion( "FMA:242982") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:242982") "fiat anatomical surface") AnnotationAssertion( "UBERON:0035085") AnnotationAssertion(rdfs:comment "All anatomical planes are fiat anatomical boundaries - no morphological boundary could ever be a perfect plane.") AnnotationAssertion(rdfs:label "anatomical plane") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (plane of autotomy) AnnotationAssertion(Annotation( ) Annotation( ) "An anatomical plane that bisects a zone of weakness in an appendage. When autotamy occurs, the appendage divides along this plane.") AnnotationAssertion( "this class is intended for autotomy that bisects an appendage. Other forms of autotomy are possible: for example, a sea cucumber and autotomitize internal organs") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035086") AnnotationAssertion(rdfs:label "plane of autotomy") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (fracture plane) AnnotationAssertion(Annotation( ) Annotation( ) "A plane of autotomy that divides an appendage through a bone.") AnnotationAssertion(Annotation( ) "plane of autotomy bisecting bone") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035087") AnnotationAssertion(rdfs:label "fracture plane") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) # Class: (vertebral fracture plane) AnnotationAssertion(Annotation( ) Annotation( ) "A plane of autotomy that divides an appendage through a vertebral bone.") AnnotationAssertion( "Interestingly, zones of cartilage or connective tissue do not demarcate the fracture planes in A. carolinensis, as seen in other lizard taxa (Cox, 1969a; Hoffstetter and Gasc, 1969)[PMID:22753107]") AnnotationAssertion( "Many authors (e.g., Holder, 1960; Mufti and Hafiz, 1972; Bellairs and Bryant, 1985; Russell and Bauer, 1992) have referred to the more proximal caudal vertebrae that lack fracture planes as 'pygal vertebrae' and the more distal caudal vertebrae that possess fracture planes as 'postpygal vertebrae' However, many lizard taxa lack fracture planes in their caudal vertebrae altogether, making this classification difficult to apply in these cases (Etheridge, 1967; Bellairs and Bryant, 1985). Furthermore, in some species (including A. carolinensis) the most distal of the transverse process-bearing vertebrae may possess fracture planes and should technically be called postpygal vertebrae, despite the fact that they more closely resemble the more proximal, non-fracture plane-bearing vertebrae in overall morphology (Cox, 1969a)[PMID:22753107]") AnnotationAssertion(Annotation( ) "plane of autotomy bisecting vertebral bone") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035088") AnnotationAssertion(rdfs:label "vertebral fracture plane") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) # Class: (plane of autotomy bisecting joint) AnnotationAssertion(Annotation( ) Annotation( ) "A plane of autotomy that divides an appendage in the space between appendage bones.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035089") AnnotationAssertion(rdfs:label "plane of autotomy bisecting joint") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) # Class: (plane of autotomy bisecting intervertebral joint) AnnotationAssertion(Annotation( ) Annotation( ) "A plane of autotomy that divides an appendage in the space between vertebrae.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035090") AnnotationAssertion(rdfs:label "plane of autotomy bisecting intervertebral joint") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) # Class: (transverse process of caudal vertebra) AnnotationAssertion(Annotation( ) "A transverse process that is part of a caudal vertebra.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035102") AnnotationAssertion(rdfs:label "transverse process of caudal vertebra") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (perineal body smooth muscle muscle tissue) AnnotationAssertion( "EMAPA:18923") AnnotationAssertion(Annotation( "EMAPA:18923") "perineal body muscle") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035103") AnnotationAssertion(rdfs:label "perineal body smooth muscle muscle tissue") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (raphe of penis) AnnotationAssertion( "FMA:19646") AnnotationAssertion(Annotation( "FMA:19646") "penile raphe") AnnotationAssertion(Annotation( "FMA:19646") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "raphe penis") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035104") AnnotationAssertion(rdfs:label "raphe of penis") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (sac of scrotum) AnnotationAssertion(Annotation( ) "Any of the two testis-carrying compartments of the scrotum.") AnnotationAssertion( "FMA:18251") AnnotationAssertion( "scrotal comartment") AnnotationAssertion(Annotation( "FMA:18251") "scrotal sac") AnnotationAssertion( "testis comartment") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035105") AnnotationAssertion(rdfs:label "sac of scrotum") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectIntersectionOf(ObjectMinCardinality(1 ) ObjectMaxCardinality(1 ))) SubClassOf( ObjectSomeValuesFrom( )) # Class: (raphe of perineum) AnnotationAssertion(Annotation( ) "The perineal raphe extends from the anus, through the mid-line of the scrotum (scrotal raphe) and upwards through the posterior mid-line aspect of the penis (penile raphe).") AnnotationAssertion( "It is the result of a fetal developmental phenomenon whereby the scrotum (the developmental equivalent of the labia in females) and penis close toward the midline and fuse. The resulting ridge of tissue is evident as the perineal raphe") AnnotationAssertion( ) AnnotationAssertion( "FMA:20244") AnnotationAssertion(Annotation( "FMA:20244") "perineal raphe") AnnotationAssertion(Annotation( ) Annotation( ) "raphe perinealis") AnnotationAssertion(Annotation( ) Annotation( ) "raphe perinei") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035106") AnnotationAssertion(rdfs:label "raphe of perineum") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "Wikipedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (temporalis fascia) AnnotationAssertion(Annotation( ) "The temporal fascia covers the Temporalis muscle. It is a strong, fibrous investment, covered, laterally, by the Auricularis anterior and superior, by the galea aponeurotica, and by part of the Orbicularis oculi. The superficial temporal vessels and the auriculotemporal nerve cross it from below upward. Above, it is a single layer, attached to the entire extent of the superior temporal line; but below, where it is fixed to the zygomatic arch, it consists of two layers, one of which is inserted into the lateral, and the other into the medial border of the arch. A small quantity of fat, the orbital branch of the superficial temporal artery, and a filament from the zygomatic branch of the maxillary nerve, are contained between these two layers. It affords attachment by its deep surface to the superficial fibers of the Temporalis.") AnnotationAssertion( ) AnnotationAssertion( "FMA:53996") AnnotationAssertion( "MFMO:0000105") AnnotationAssertion(Annotation( "FMA:53996") "fascia of temporalis") AnnotationAssertion(Annotation( "MFMO:0000105") "temporal fascia") AnnotationAssertion(Annotation( "FMA:53996") "temporalis fascia") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035108") AnnotationAssertion(rdfs:comment "Request new term but the definition needs revision.") AnnotationAssertion(rdfs:label "temporalis fascia") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "cjm"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (plantar nerve) AnnotationAssertion(Annotation( ) Annotation( ) "A nerve that innervates the sole of the foot. Planar nerves arise from the posterior branch of the tibial nerve.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "NCIT:C77674") AnnotationAssertion( "uberon") AnnotationAssertion( "nerve, plantar") AnnotationAssertion( "UBERON:0035109") AnnotationAssertion(rdfs:comment "Divided into medial and plantar based on the location of the foot supplied") AnnotationAssertion(rdfs:label "plantar nerve") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lateral plantar nerve) AnnotationAssertion(Annotation( ) Annotation( ) "A plantar nerve that supplies the lateral side of the plantar part of the foot, including pedal digit 5.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:44724") AnnotationAssertion(Annotation( "FMA:44724") "external plantar nerve") AnnotationAssertion(Annotation( ) Annotation( ) "nervus plantaris lateralis") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035110") AnnotationAssertion(rdfs:label "lateral plantar nerve") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses(Annotation( "lexical"^^xsd:string) ) # Class: (medial plantar nerve) AnnotationAssertion(Annotation( ) Annotation( ) "A plantar nerve that supplies the medial side of the plantar part of the foot, including pedal digit 1.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:44716") AnnotationAssertion(Annotation( "FMA:44716") "internal plantar nerve") AnnotationAssertion(Annotation( ) Annotation( ) "nervus plantaris medialis") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035111") AnnotationAssertion(rdfs:label "medial plantar nerve") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (intrinsic muscle) AnnotationAssertion(Annotation( ) "Any of the muscles that are entirely within the body part or segment moved by them.") AnnotationAssertion( "ideally we would like to classify under this class automatically but this is difficult to do without applying external rules. Note that logical definitions that use this class as a genus may not be strictly correct") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035112") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "intrinsic muscle") SubClassOf( ) # Class: (central part of mediodorsal nucleus of the thalamus) AnnotationAssertion( "MBA:617") AnnotationAssertion(Annotation( "MBA:617") "mediodorsal nucleus of the thalamus, central part") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "MBA:617") Annotation( ) "MDc") AnnotationAssertion( "UBERON:0035113") AnnotationAssertion(rdfs:label "central part of mediodorsal nucleus of the thalamus") SubClassOf( ) SubClassOf(Annotation( "MBA") ObjectSomeValuesFrom( )) # Class: (lateral part of mediodorsal nucleus of the thalamus) AnnotationAssertion( "MBA:626") AnnotationAssertion(Annotation( "MBA:626") "mediodorsal nucleus of the thalamus, lateral part") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "MBA:626") Annotation( ) "MDl") AnnotationAssertion( "UBERON:0035114") AnnotationAssertion(rdfs:label "lateral part of mediodorsal nucleus of the thalamus") SubClassOf( ) SubClassOf(Annotation( "MBA") ObjectSomeValuesFrom( )) # Class: (diastema between central incisors) AnnotationAssertion(Annotation( ) "A space or gap between the left and right central incisors, on either the upper or lower jaw.") AnnotationAssertion( "interdental space, central incisors") AnnotationAssertion( "midline diastema") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035115") AnnotationAssertion(rdfs:label "diastema between central incisors") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (diastema between upper central incisors) AnnotationAssertion(Annotation( ) "A space or gap between the left and right central incisors on the upper jaw.") AnnotationAssertion( "interdental space between maxillary central incisors") AnnotationAssertion( "interdental space, upper central incisors") AnnotationAssertion( "midline maxillary diastema") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035116") AnnotationAssertion(rdfs:label "diastema between upper central incisors") SubClassOf( ) SubClassOf( ObjectIntersectionOf(ObjectMinCardinality(2 ) ObjectMaxCardinality(2 ))) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (diastema between lower central incisors) AnnotationAssertion(Annotation( ) "A space or gap between the left and right central incisors on the lower jaw.") AnnotationAssertion( "interdental space between mandibular central incisors") AnnotationAssertion( "interdental space, lower central incisors") AnnotationAssertion( "midline mandibular diastema") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035117") AnnotationAssertion(rdfs:label "diastema between lower central incisors") SubClassOf( ) SubClassOf( ObjectIntersectionOf(ObjectMinCardinality(2 ) ObjectMaxCardinality(2 ))) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (material entity in digestive tract) AnnotationAssertion(Annotation( ) "Any material entity that is located in the digestive tract. This includes undigested food and liquid as well as unexcreted waste products. It also includes other entities such as ingested stones used to aid digestion. Any microbial cells or cell populations are also included.") AnnotationAssertion( "Note that we treat any material entity that is ingested as an anatomical structure by defintion, although this may be expanding the CARO usage somewhat") AnnotationAssertion(Annotation( ) "digestive tract contents") AnnotationAssertion( "uberon") AnnotationAssertion( "ingested material entity") AnnotationAssertion( "UBERON:0035118") AnnotationAssertion(rdfs:label "material entity in digestive tract") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (diastema between incisors) AnnotationAssertion(Annotation( ) "A space or gap any two incisors. This may be a midline diastema between central incisors, or a diastema located entirely in a single jaw quadrant between lateral incisors.") AnnotationAssertion( "incisor diastema") AnnotationAssertion( "interdental space, incisors") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035119") AnnotationAssertion(rdfs:label "diastema between incisors") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (fauces) AnnotationAssertion(Annotation( ) "Lateral walls of the oropharynx that are located medial to the palatoglossal folds.") AnnotationAssertion( ) AnnotationAssertion( "FMA:55019") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035120") AnnotationAssertion(rdfs:label "fauces") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (interincisive suture) AnnotationAssertion(Annotation( ) "Median palatine suture of the palatine processes of the maxillary bones, and the median suture of the palatine bones.") AnnotationAssertion( ) AnnotationAssertion( "FMA:75777") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:75777") "incisive suture") AnnotationAssertion( "midline of hard palate") AnnotationAssertion( "UBERON:0035122") AnnotationAssertion(rdfs:label "interincisive suture") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (palatomaxillary suture) AnnotationAssertion(Annotation( ) "Line of union, in the floor of the orbit, between the orbital process of the palatine bone and the orbital surface of the maxilla.") AnnotationAssertion(Annotation( ) "The palatomaxillary suture is a suture separating the maxilla from the palatine bone.") AnnotationAssertion( ) AnnotationAssertion( "FMA:52964") AnnotationAssertion(Annotation( "FMA:52964") "palatomaxillary suture of skull") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035123") AnnotationAssertion(rdfs:label "palatomaxillary suture") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (palatoethmoidal suture) AnnotationAssertion(Annotation( ) "A line of junction of the orbital process of the palatine bone and the orbital plate of the ethmoid.") AnnotationAssertion( "FMA:52965") AnnotationAssertion(Annotation( "FMA:52965") "palato-ethmoidal suture") AnnotationAssertion(Annotation( "FMA:52965") "palatoethmoidal suture of skull") AnnotationAssertion(Annotation( "FMA:52965") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "sutura palatoethmoidalis") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035124") AnnotationAssertion(rdfs:label "palatoethmoidal suture") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (transverse palatine suture) AnnotationAssertion(Annotation( ) "The line of junction between the processes of the maxilla and the horizontal parts of the palatine bones that form the hard palate.") AnnotationAssertion( "FMA:52971") AnnotationAssertion(Annotation( "FMA:52971") "transverse palatine suture of skull") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035126") AnnotationAssertion(rdfs:label "transverse palatine suture") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (suture of hard palate) AnnotationAssertion(Annotation( ) "Any of the sutures of the hard palate.") AnnotationAssertion(Annotation( ) "palatine suture") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035127") AnnotationAssertion(rdfs:label "suture of hard palate") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (manus cartilage element) AnnotationAssertion( "EMAPA:32631") AnnotationAssertion(Annotation( "EMAPA:32631") "hand cartilage condensation") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035128") AnnotationAssertion(rdfs:label "manus cartilage element") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EMAPA-modified") ObjectSomeValuesFrom( )) # Class: (pes cartilage element) AnnotationAssertion( "EMAPA:32657") AnnotationAssertion(Annotation( "EMAPA:32657") "foot cartilage condensation") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035129") AnnotationAssertion(rdfs:label "pes cartilage element") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EMAPA-modified") ObjectSomeValuesFrom( )) # Class: (auditory ossicle endochondral element) AnnotationAssertion(Annotation( ) Annotation( "EMAPA:17824") "ossicle element") AnnotationAssertion( "auditory skeletal element") AnnotationAssertion(Annotation( "MP:0005105") "middle ear ossicle element") AnnotationAssertion( "uberon") AnnotationAssertion( "ear ossicle element") AnnotationAssertion(Annotation( ) "ear ossicles element") AnnotationAssertion( "middle ear skeletal element") AnnotationAssertion( "ossicle element of ear") AnnotationAssertion( "ossicle element of inner ear") AnnotationAssertion(Annotation( ) "ossicular chain element") AnnotationAssertion( "UBERON:0035130") AnnotationAssertion(rdfs:label "auditory ossicle endochondral element") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "MA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (auditory ossicle cartilage element) AnnotationAssertion( "EMAPA:35979") AnnotationAssertion(Annotation( "EMAPA:35979") "ossicle cartilage condensation") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035131") AnnotationAssertion(rdfs:label "auditory ossicle cartilage element") SubClassOf( ) SubClassOf( ) # Class: (auditory ossicle pre-cartilage element) AnnotationAssertion( "EMAPA:35982") AnnotationAssertion(Annotation( "EMAPA:35982") "ossicle pre-cartilage condensation") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035132") AnnotationAssertion(rdfs:label "auditory ossicle pre-cartilage element") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (longitudinal arch of pes) AnnotationAssertion(Annotation( ) "A curved region of the skeleton of the pes (foot) formed by the tarsal and metatarsal bones.") AnnotationAssertion( ) AnnotationAssertion(Annotation( "PMC2048995") ) AnnotationAssertion(Annotation( "FMA"^^xsd:string) "in FMA this is modeled as an anatomical line, here we model as an actual subdivision of the skeletal system, containing a row of bones as parts, arranged in a particular configuration") AnnotationAssertion( ) AnnotationAssertion( "FMA:75030") AnnotationAssertion(Annotation( "FMA:75030") "longitudinal arch of foot") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035133") AnnotationAssertion(rdfs:label "longitudinal arch of pes") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (anterior nasal spine of maxilla) AnnotationAssertion(Annotation( ) "A pointed projection at the front extremity of the intermaxillary suture.") AnnotationAssertion( ) AnnotationAssertion( "FMA:75770") AnnotationAssertion(Annotation( "FMA:75770") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "spina nasalis anterior corporis maxillae") AnnotationAssertion( "uberon") AnnotationAssertion( "anterior nasal spine") AnnotationAssertion( "UBERON:0035139") AnnotationAssertion(rdfs:label "anterior nasal spine of maxilla") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (preputial space of male) AnnotationAssertion( "EMAPA:36342") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035142") AnnotationAssertion(rdfs:label "preputial space of male") SubClassOf( ) SubClassOf(Annotation( "EMAPA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (preputial space of female) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035143") AnnotationAssertion(rdfs:label "preputial space of female") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (preputial space) AnnotationAssertion(Annotation( ) "Space between the prepuce and glans penis or clitoris.") AnnotationAssertion( "FMA:28606") AnnotationAssertion(Annotation( "FMA:28606") "preputial cavity") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035144") AnnotationAssertion(rdfs:label "preputial space") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (nucleus sacci vasculosi) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035145") AnnotationAssertion(rdfs:label "nucleus sacci vasculosi") SubClassOf( ) # Class: (gingival epithelial attachment) AnnotationAssertion( ) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035149") AnnotationAssertion(rdfs:label "gingival epithelial attachment") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (superior cerebral vein) AnnotationAssertion(Annotation( ) "The Superior Cerebral Veins, eight to twelve in number, drain the superior, lateral, and medial surfaces of the hemispheres, and are mainly lodged in the sulci between the gyri, but some run across the gyri. They open into the superior sagittal sinus; the anterior veins runs nearly at right angles to the sinus; the posterior and larger veins are directed obliquely forward and open into the sinus in a direction more or less opposed to the current of the blood contained within it.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:50978") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "superior cerebral vein") AnnotationAssertion( "UBERON:0035150") AnnotationAssertion(rdfs:label "superior cerebral vein") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (dorsal cerebral vein) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37142") AnnotationAssertion( "MA:0002103") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035151") AnnotationAssertion(rdfs:label "dorsal cerebral vein") SubClassOf( ) # Class: (internal cerebral vein) AnnotationAssertion(Annotation( ) "The internal cerebral veins (veins of Galen; deep cerebral veins) drain the deep parts of the hemisphere and are two in number; each is formed near the interventricular foramen by the union of the terminal and choroid veins. They run backward parallel with one another, between the layers of the tela chorioidea of the third ventricle, and beneath the splenium of the corpus callosum, where they unite to form a short trunk, the great cerebral vein; just before their union each receives the corresponding basal vein.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:51003") AnnotationAssertion( "NCIT:C32838") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "internal cerebral vein") AnnotationAssertion( "UBERON:0035152") AnnotationAssertion(rdfs:label "internal cerebral vein") SubClassOf(Annotation( "ncithesaurus"^^xsd:string) ) # Class: (dorsolateral prefrontal cortex layer 1) AnnotationAssertion(Annotation( "NLX:156731") "Most superficial layer of the Dorsolateral Prefrontal Cortex (DLPFC).") AnnotationAssertion( "NLX:156731") AnnotationAssertion( "layer I of dorsolateral prefrontal cortex") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "dlPF1") AnnotationAssertion(Annotation( ) "dlPFC1") AnnotationAssertion( "UBERON:0035153") AnnotationAssertion(rdfs:label "dorsolateral prefrontal cortex layer 1") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (dorsolateral prefrontal cortex layer 2) AnnotationAssertion(Annotation( "NLX:156732") "Layer 2 of neocortex lying just deep to superficial layer 1 of dorsolateral prefrontal cortex.") AnnotationAssertion( "NLX:156732") AnnotationAssertion( "PBA:12986") AnnotationAssertion(Annotation( "PBA:12986") "layer II of dorsolateral prefrontal cortex") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "dlPF2") AnnotationAssertion(Annotation( ) "dlPFC2") AnnotationAssertion( "UBERON:0035154") AnnotationAssertion(rdfs:label "dorsolateral prefrontal cortex layer 2") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (dorsolateral prefrontal cortex layer 3) AnnotationAssertion(Annotation( "NLX:156733") "Layer 3 of dorsolateral prefrontal cortex lying deep to the layer 2 and cytoarchitectonically defined by numerous small pyramidal neurons.") AnnotationAssertion( "NLX:156733") AnnotationAssertion( "PBA:12987") AnnotationAssertion(Annotation( "PBA:12987") "layer III of dorsolateral prefrontal cortex") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "dlPF3") AnnotationAssertion(Annotation( ) "dlPFC3") AnnotationAssertion( "UBERON:0035155") AnnotationAssertion(rdfs:label "dorsolateral prefrontal cortex layer 3") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (dorsolateral prefrontal cortex layer 4) AnnotationAssertion(Annotation( "NLX:156734") "Layer 4 of dorsolateral prefrontal cortex lying deep to the external pyramidal layer and cytoarchitectonically defined by presence of small cells.") AnnotationAssertion( "NLX:156734") AnnotationAssertion( "PBA:12988") AnnotationAssertion(Annotation( "PBA:12988") "granular layer IV of dorsolateral prefrontal cortex") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "dlPF4") AnnotationAssertion(Annotation( ) "dlPFC4") AnnotationAssertion( "UBERON:0035156") AnnotationAssertion(rdfs:label "dorsolateral prefrontal cortex layer 4") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (dorsolateral prefrontal cortex layer 5) AnnotationAssertion(Annotation( "NLX:156735") "Layer 5 of dorsolateral prefrontal cortex lying deep to the internal granule cell layer 4 and cytoarchitectonically divisible into layers 5a and 5b. Layer 5a is characterized by the predominance of large pyramidal cell bodies. Layer 5b is pale in comparison.") AnnotationAssertion( "NLX:156735") AnnotationAssertion( "PBA:12989") AnnotationAssertion(Annotation( "PBA:12989") "layer V of dorsolateral prefrontal cortex") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "dlPF5") AnnotationAssertion(Annotation( ) "dlPFC5") AnnotationAssertion( "UBERON:0035157") AnnotationAssertion(rdfs:label "dorsolateral prefrontal cortex layer 5") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (dorsolateral prefrontal cortex layer 6) AnnotationAssertion(Annotation( "NLX:156736") "Innermost layer of dorsolateral prefrontal cortex lying deep to the internal pyramidal cell layer 5. It is cytoarchitectonically defined in the DLPFC by cells of varying sizes. DLPFC layer 6a is characterized by more neurons and layer 6b has comparatively more glia.") AnnotationAssertion( "NLX:156736") AnnotationAssertion( "PBA:12990") AnnotationAssertion(Annotation( "PBA:12990") "layer VI of dorsolateral prefrontal cortex") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "dlPF6") AnnotationAssertion(Annotation( ) "dlPFC6") AnnotationAssertion( "UBERON:0035158") AnnotationAssertion(rdfs:label "dorsolateral prefrontal cortex layer 6") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (entire surface of organism) AnnotationAssertion(Annotation( "FMA:61695") "Anatomical surface, which is the external surface of the whole body. Examples: There is only one body surface.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:61695") AnnotationAssertion( "NCIT:C29667") AnnotationAssertion(Annotation( "FMA:61695") "surface of body") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035159") AnnotationAssertion(rdfs:label "entire surface of organism") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (infraclavicular lymph node) AnnotationAssertion(Annotation( "ncithesaurus:Infraclavicular_Lymph_Node") "A lymph node located in the area below the clavicle.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:14193") AnnotationAssertion( "NCIT:C63705") AnnotationAssertion(Annotation( "FMA:14193") "deltopectoral lymph node") AnnotationAssertion(Annotation( "FMA:14193") "deltopectoral node") AnnotationAssertion(Annotation( "FMA:14193") "infraclavicular node") AnnotationAssertion(Annotation( "FMA:14193") "nodus lymphaticus infraclavicularis axillae") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035162") AnnotationAssertion(rdfs:label "infraclavicular lymph node") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (posterior surface of prostate) AnnotationAssertion(Annotation( "ncithesaurus:Posterior_Surface_of_the_Prostate") "The flattened aspect of the prostate with a slight furrow facing the rectum and anus.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:19592") AnnotationAssertion( "NCIT:C13095") AnnotationAssertion(Annotation( "FMA:19592") "facies posterior (prostatae)") AnnotationAssertion(Annotation( "FMA:19592") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "facies posterior prostatae") AnnotationAssertion(Annotation( "FMA:19592") "posterior surface of prostate gland") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035165") AnnotationAssertion(rdfs:label "posterior surface of prostate") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses(Annotation( "lexical"^^xsd:string) ) # Class: (infraclavicular region) AnnotationAssertion(Annotation( "ncithesaurus:Infraclavicular_Region") "The region below the clavicle.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:61479") AnnotationAssertion( "NCIT:C25268") AnnotationAssertion(Annotation( "FMA:61479") "infraclavicular part of chest") AnnotationAssertion(Annotation( "FMA:61479") "infraclavicular region") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035168") AnnotationAssertion(rdfs:label "infraclavicular region") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obturator lymph node) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:16656") AnnotationAssertion( "NCIT:C88141") AnnotationAssertion(Annotation( "FMA:16656") "obturator node") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035171") AnnotationAssertion(rdfs:label "obturator lymph node") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (right ear) AnnotationAssertion(Annotation( "ncithesaurus:Right_Ear") "The organ of hearing located on the right side of the head.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:53641") AnnotationAssertion( "NCIT:C81285") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035174") AnnotationAssertion(rdfs:label "right ear") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (abdominal part of esophagus) AnnotationAssertion(Annotation( "ncithesaurus:Abdominal_Esophagus") "Clinical esophageal segment composed of smooth muscle. It corresponds to the inferior part of the lower third topographic segment of the esophagus.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:9397") AnnotationAssertion( "NCIT:C12252") AnnotationAssertion(Annotation( "FMA:9397") "T11 part of esophagus") AnnotationAssertion(Annotation( "FMA:9397") "abdominal esophagus") AnnotationAssertion(Annotation( "FMA:9397") "abdominal part of oesophagus") AnnotationAssertion(Annotation( "FMA:9397") "pars abdominalis (oesophagus)") AnnotationAssertion(Annotation( "FMA:9397") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "pars abdominalis oesophageae") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:9397") "t11 segment of esophagus") AnnotationAssertion( "UBERON:0035177") AnnotationAssertion(rdfs:label "abdominal part of esophagus") SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (sigmoid artery) AnnotationAssertion(Annotation( ) "The sigmoid arteries, two or three in number, run obliquely downward and to the left behind the peritoneum and in front of the Psoas major, ureter, and internal spermatic vessels. Their branches supply the lower part of the descending colon, the iliac colon, and the sigmoid or pelvic colon; anastomosing above with the left colic, and below with the superior hemorrhoidal artery.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:14830") AnnotationAssertion( "NCIT:C33549") AnnotationAssertion(Annotation( "FMA:14830") "inferior left colic artery") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035180") AnnotationAssertion(rdfs:label "sigmoid artery") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (calcarine artery) AnnotationAssertion(Annotation( "ncithesaurus:Calcarine_Artery") "An artery that branches from the medial occipital artery that aligns with the calcarine sulcus.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:50655") AnnotationAssertion( "NCIT:C32251") AnnotationAssertion(Annotation( "FMA:50655") "calcarine branch of medial occipital artery") AnnotationAssertion(Annotation( "FMA:50655") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "ramus calcarinus (arteria occipitalis medialis)") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035183") AnnotationAssertion(rdfs:label "calcarine artery") SubClassOf( ) # Class: (valve of foramen ovale) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:75348") AnnotationAssertion( "NCIT:C34326") AnnotationAssertion(Annotation( "FMA:75348") "foramen ovale valve") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035186") AnnotationAssertion(rdfs:label "valve of foramen ovale") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (plantar metatarsal artery) AnnotationAssertion(Annotation( ) "The plantar metatarsal arteries (digital branches) are four in number, and run forward between the metatarsal bones and in contact with the Interossei. Each divides into a pair of plantar digital arteries which supply the adjacent sides of the toes. Near their points of division each sends upward an anterior perforating branch to join the corresponding dorsal metatarsal artery. The first plantar metatarsal artery (arteria princeps hallucis) springs from the junction between the lateral plantar and deep plantar arteries and sends a digital branch to the medial side of the first toe. The digital branch for the lateral side of the fifth toe arise from the lateral plantar artery near the base of the fifth metatarsal bone.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:43956") AnnotationAssertion( "NCIT:C52743") AnnotationAssertion(Annotation( "FMA:43956") "plantar metatarsal branch of plantar arch") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035195") AnnotationAssertion(rdfs:label "plantar metatarsal artery") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (superficial lymphatic vessel) AnnotationAssertion(Annotation( "ncithesaurus:Superficial_Lymphatic_Vessel") "The tubules that carry lymph throughout the body that are just beneath the surface of the skin.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:52011") AnnotationAssertion( "NCIT:C33663") AnnotationAssertion(Annotation( "FMA:52011") "superficial lymph vessel") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035198") AnnotationAssertion(rdfs:label "superficial lymphatic vessel") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (gastrocolic ligament) AnnotationAssertion(Annotation( "ncithesaurus:Gastrocolic_Ligament") "A major portion of the greater omentum between the stomach and the transverse colon.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:16552") AnnotationAssertion( "NCIT:C32667") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035201") AnnotationAssertion(rdfs:label "gastrocolic ligament") SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (occipital lymph node) AnnotationAssertion(Annotation( "ncithesaurus:Occipital_Lymph_Node") "A lymph node located in the back of the head adjacent to the trapezius muscle.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:61214") AnnotationAssertion( "NCIT:C98188") AnnotationAssertion(Annotation( "FMA:61214") "occipital node") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035204") AnnotationAssertion(rdfs:label "occipital lymph node") SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (deep fibular nerve) AnnotationAssertion(Annotation( "ncithesaurus:Deep_Peroneal_Nerve") "A branch of the common peroneal nerve. It innervates the ankle and toes.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:44771") AnnotationAssertion( "NCIT:C92602") AnnotationAssertion(Annotation( "FMA:44771") "deep peroneal nerve") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035207") AnnotationAssertion(rdfs:label "deep fibular nerve") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (paracolic gutter) AnnotationAssertion(Annotation( ) "The paracolic gutters (paracolic sulci, paracolic recesses) are spaces between the colon and the abdominal wall. There are two paracolic gutters: The right lateral paracolic gutter. The left lateral paracolic gutter. These gutters are clinically important because they allow a passage for infectious fluids from different compartments of the abdomen. For example; fluid from an infected appendix can track up the right paracolic gutter to the hepatorenal recess.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:14719") AnnotationAssertion( "NCIT:C89787") AnnotationAssertion(Annotation( "FMA:14719") "paracolic sulcus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035210") AnnotationAssertion(rdfs:label "paracolic gutter") SubClassOf( ) # Class: (basal zone of heart) AnnotationAssertion(Annotation( "ncithesaurus:Base_of_the_Heart") "The superior portion of the heart located opposite to the apical portion. It is formed mainly by the left atrium.") AnnotationAssertion(Annotation( "FMA:223286") "Zone of heart which has as its parts the left atrium and the inflow part of right atrium.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:223286") AnnotationAssertion( "NCIT:C48589") AnnotationAssertion(Annotation( "FMA:223286") "anatomical base of heart") AnnotationAssertion(Annotation( "FMA:223286") "base of heart") AnnotationAssertion(Annotation( "FMA:223286") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "basis cordis") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035213") AnnotationAssertion(rdfs:label "basal zone of heart") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (thoracic part of esophagus) AnnotationAssertion(Annotation( "FMA:9396") "Zone of esophagus located in the thorax.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:9396") AnnotationAssertion( "NCIT:C12251") AnnotationAssertion(Annotation( "FMA:9396") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "pars thoracica (oesophagus)") AnnotationAssertion(Annotation( "FMA:9396") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "pars thoracica oesophageae") AnnotationAssertion(Annotation( "FMA:9396") "thoracic esophagus") AnnotationAssertion(Annotation( "FMA:9396") "thoracic part of oesophagus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035216") AnnotationAssertion(rdfs:label "thoracic part of esophagus") SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (parasternal lymph node) AnnotationAssertion(Annotation( "ncithesaurus:Internal_Mammary_Lymph_Node") "Any of the lymph nodes of the breast located under the ribcage, near the sternum.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:5849") AnnotationAssertion( "NCIT:C32853") AnnotationAssertion(Annotation( "FMA:5849") "internal mammary lymph node") AnnotationAssertion(Annotation( "FMA:5849") "nodus parasternale") AnnotationAssertion(Annotation( "FMA:5849") "parasternal node") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035219") AnnotationAssertion(rdfs:label "parasternal lymph node") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (posterior parietal artery) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:50488") AnnotationAssertion( "NCIT:C33372") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035222") AnnotationAssertion(rdfs:label "posterior parietal artery") SubClassOf( ) DisjointClasses(Annotation( "lexical"^^xsd:string) ) # Class: (anterior temporal artery) AnnotationAssertion(Annotation( "ncithesaurus:Anterior_Temporal_Artery") "A branch of the middle cerebral artery that supplies blood to the anterior part of the temporal lobe.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:50382") AnnotationAssertion( "NCIT:C32113") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035225") AnnotationAssertion(rdfs:label "anterior temporal artery") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ) DisjointClasses(Annotation( "lexical"^^xsd:string) ) # Class: (tonsillar fossa) AnnotationAssertion(Annotation( ) "Between the plica triangularis and the surface of the palatine tonsils is a space known as the tonsillar fossa (or tonsillar sinus); in many cases, however, this sinus is obliterated by its walls becoming adherent.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:55041") AnnotationAssertion( "NCIT:C12235") AnnotationAssertion(Annotation( "FMA:55041") "tonsillar bed") AnnotationAssertion(Annotation( "FMA:55041") "tonsillar sinus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035228") AnnotationAssertion(rdfs:label "tonsillar fossa") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (superficial middle cerebral vein) AnnotationAssertion(Annotation( "ncithesaurus:Superficial_Middle_Cerebral_Vein") "A vein that runs along the fissure of Sylvius to the cavernous sinus on the lateral surface of the brain and connects to the superior sagittal and transverse sinuses.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:50983") AnnotationAssertion( "NCIT:C33664") AnnotationAssertion(Annotation( "FMA:50983") "Sylvian vein") AnnotationAssertion(Annotation( "FMA:50983") "vein of Labbe") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035231") AnnotationAssertion(rdfs:label "superficial middle cerebral vein") SubClassOf(Annotation( "ncithesaurus"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (medial circumflex femoral vein) AnnotationAssertion(Annotation( "ncithesaurus:Medial_Femoral_Vein") "A circumflex femoral vein that accompanies the medial circumflex femoral artery.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:44325") AnnotationAssertion( "NCIT:C52688") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035234") AnnotationAssertion(rdfs:label "medial circumflex femoral vein") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (branch of internal carotid artery) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:70506") AnnotationAssertion( "NCIT:C32837") AnnotationAssertion(Annotation( "FMA:70506") "internal carotid arterial subdivision") AnnotationAssertion(Annotation( "FMA:70506") "subdivision of internal carotid artery") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035237") AnnotationAssertion(rdfs:label "branch of internal carotid artery") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (posterior wall of oropharynx) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:55032") AnnotationAssertion( "NCIT:C12240") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035240") AnnotationAssertion(rdfs:label "posterior wall of oropharynx") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (anal sinus) AnnotationAssertion(Annotation( "ncithesaurus:Anal_Sinus") "Furrows, with pouchlike recesses at the lower end, separating the rectal columns.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:15717") AnnotationAssertion( "NCIT:C32070") AnnotationAssertion(Annotation( "FMA:15717") "anal crypt") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035243") AnnotationAssertion(rdfs:label "anal sinus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (posterior longitudinal ligament) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:31894") AnnotationAssertion( "NCIT:C33365") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035246") AnnotationAssertion(rdfs:label "posterior longitudinal ligament") SubClassOf(Annotation( "FMA"^^xsd:string) ) DisjointClasses(Annotation( "lexical"^^xsd:string) ) # Class: (posterior external jugular vein) AnnotationAssertion(Annotation( "ncithesaurus:Posterior_External_Jugular_Vein") "A vein that drains the superficial muscles and integument of the upper back portion of the neck into the external jugular vein.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:14318") AnnotationAssertion( "NCIT:C33360") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035249") AnnotationAssertion(rdfs:label "posterior external jugular vein") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (left subcostal vein) AnnotationAssertion(Annotation( "ncithesaurus:Left_Subcostal_Vein") "A vein that extends along the bottom of the twelfth rib on the left side of the body.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:4951") AnnotationAssertion( "NCIT:C53125") AnnotationAssertion(Annotation( "FMA:4951") "vena subcostalis sinistra") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035252") AnnotationAssertion(rdfs:label "left subcostal vein") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (mons pubis) AnnotationAssertion(Annotation( ) "A structure composed of adipose tissue lying above the pubic bone of adult women, anterior to the symphysis pubis. The mons pubis forms the anterior portion of the vulva, and limits the perineal region proximally and anteriorly.") AnnotationAssertion( "In humans, the mons pubis divides into the labia majora on either side of the furrow, known as the cleft of venus, that surrounds the labia minora, clitoris, vaginal opening, and other structures of the vulval vestibule. The fatty tissue of the mons veneris is sensitive to estrogen, causing a distinct mound to form with the onset of puberty. This pushes the forward portion of the labia majora out and away from the pubic bone") AnnotationAssertion( "The size of the mons pubis varies with the general level of hormone and body fat. After puberty it is covered with pubic hair and enlarges.") AnnotationAssertion(Annotation( ) "mons") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:20218") AnnotationAssertion( "NCIT:C33139") AnnotationAssertion(Annotation( ) Annotation( ) "mons veneris") AnnotationAssertion(Annotation( ) "public mound") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035258") AnnotationAssertion(rdfs:label "mons pubis") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (posterior temporal artery) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:50458") AnnotationAssertion( "NCIT:C33384") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035261") AnnotationAssertion(rdfs:label "posterior temporal artery") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ) # Class: (neck of gallbladder) AnnotationAssertion(Annotation( "ncithesaurus:Gallbladder_Neck") "The narrowest portion of the gallbladder and distal to the cystic duct.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:14538") AnnotationAssertion( "NCIT:C32649") AnnotationAssertion(Annotation( "FMA:14538") "cervix of gallbladder") AnnotationAssertion(Annotation( "FMA:14538") "gallbladder neck") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035267") AnnotationAssertion(rdfs:label "neck of gallbladder") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (roof of nasopharynx) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:54906") AnnotationAssertion( "NCIT:C12242") AnnotationAssertion(Annotation( "FMA:54906") "nasopharynx roof") AnnotationAssertion(Annotation( "FMA:54906") "pharyngeal fornix") AnnotationAssertion(Annotation( "FMA:54906") "roof of nasal part of pharynx") AnnotationAssertion(Annotation( "FMA:54906") "superior nasopharynx") AnnotationAssertion(Annotation( "FMA:54906") "superior wall of nasopharynx") AnnotationAssertion(Annotation( "FMA:54906") "vault of pharynx") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035270") AnnotationAssertion(rdfs:label "roof of nasopharynx") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (superior thoracic artery) AnnotationAssertion(Annotation( ) "The superior thoracic artery (highest thoracic artery) is a small vessel normally arising from the first division of the axillary artery, but may arise from the thoracoacromial artery, itself a branch of the second division of the axillary artery. Running forward and medialward along the upper border of the pectoralis minor, the superior thoracic artery passes between it and the pectoralis major to the side of the chest. It supplies branches to the first and second intercostal spaces as well as to the superior portion of serratus anterior. It anastomoses with the internal mammary and intercostal arteries.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:22668") AnnotationAssertion( "NCIT:C33701") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035273") AnnotationAssertion(rdfs:label "superior thoracic artery") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (epigastrium) AnnotationAssertion(Annotation( "ncithesaurus:Epigastric_Region") "The upper central region of the abdomen between the costal margins and the subcostal plane.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:20389") AnnotationAssertion( "NCIT:C32525") AnnotationAssertion(Annotation( "FMA:20389") "epigastric fossa") AnnotationAssertion(Annotation( "FMA:20389") "epigastric part of abdomen") AnnotationAssertion(Annotation( "FMA:20389") "epigastric region") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035276") AnnotationAssertion(rdfs:label "epigastrium") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (supraclavicular lymph node) AnnotationAssertion(Annotation( "ncithesaurus:Supraclavicular_Lymph_Node") "A lymph node which is located above the clavicle.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:14192") AnnotationAssertion( "NCIT:C12903") AnnotationAssertion(Annotation( "FMA:14192") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "nodus lymphaticus supraclavicularis axillae") AnnotationAssertion(Annotation( "FMA:14192") "supraclavicular node") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035279") AnnotationAssertion(rdfs:label "supraclavicular lymph node") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (lateral wall of oropharynx) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:55008") AnnotationAssertion( "NCIT:C12239") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035286") AnnotationAssertion(rdfs:label "lateral wall of oropharynx") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (axillary tail of breast) AnnotationAssertion(Annotation( ) "An extension of the tissue of the breast which extends into the axilla.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:58072") AnnotationAssertion( "NCIT:C12305") AnnotationAssertion(Annotation( "FMA:58072") "axillary process") AnnotationAssertion(Annotation( "FMA:58072") "axillary tail") AnnotationAssertion(Annotation( "FMA:58072") "axillary tail of Spence") AnnotationAssertion(Annotation( "FMA:58072") "processus axillaris (glandula mammaria)") AnnotationAssertion(Annotation( "FMA:58072") "tail of Spence") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035289") AnnotationAssertion(rdfs:label "axillary tail of breast") SubClassOf( ) SubClassOf(Annotation( "ncithesaurus"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (branch of posterior tibial artery) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:69784") AnnotationAssertion( "NCIT:C33385") AnnotationAssertion(Annotation( "FMA:69784") "posterior tibial arterial branch") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035292") AnnotationAssertion(rdfs:label "branch of posterior tibial artery") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (left ear) AnnotationAssertion(Annotation( ) Annotation( "ncithesaurus:Left_Ear") "The organ of hearing located on the left side of the head[ncit,modified].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:53642") AnnotationAssertion( "NCIT:C81259") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035295") AnnotationAssertion(rdfs:label "left ear") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (tuberculum sellae) AnnotationAssertion(Annotation( ) "An elevated zone of the sella turcica behind the chiasmatic groove[WP,modified].") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:54719") AnnotationAssertion( "NCIT:C45911") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035298") AnnotationAssertion(rdfs:label "tuberculum sellae") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (branch of ulnar artery) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:22799") AnnotationAssertion( "NCIT:C33826") AnnotationAssertion(Annotation( "FMA:22799") "ulnar arterial branch") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035304") AnnotationAssertion(rdfs:label "branch of ulnar artery") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (branch of vertebral artery) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:76259") AnnotationAssertion( "NCIT:C33867") AnnotationAssertion(Annotation( "FMA:76259") "vertebral arterial branch") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035307") AnnotationAssertion(rdfs:label "branch of vertebral artery") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (inferolateral surface of prostate) AnnotationAssertion(Annotation( "ncithesaurus:Inferolateral_Surface_of_the_Prostate") "The aspect of the prostate facing the pelvic diaphragm and pubis.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:19596") AnnotationAssertion( "NCIT:C13090") AnnotationAssertion(Annotation( "FMA:19596") "facies inferolaterales (prostatae)") AnnotationAssertion(Annotation( "FMA:19596") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "facies inferolateralis prostatae") AnnotationAssertion(Annotation( "FMA:19596") "inferolateral surface of prostate gland") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035310") AnnotationAssertion(rdfs:label "inferolateral surface of prostate") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (posterior wall of laryngopharynx) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:55063") AnnotationAssertion( "NCIT:C12249") AnnotationAssertion(Annotation( "FMA:55063") "posterior wall of hypopharynx") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035313") AnnotationAssertion(rdfs:label "posterior wall of laryngopharynx") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (prostatic capsule) AnnotationAssertion(Annotation( "ncithesaurus:Capsule_of_the_Prostate") "The membrane the surrounds the prostate gland.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:19583") AnnotationAssertion( "NCIT:C13086") AnnotationAssertion(Annotation( "FMA:19583") "capsule of prostate") AnnotationAssertion(Annotation( "FMA:19583") "capsule of prostate gland") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035316") AnnotationAssertion(rdfs:label "prostatic capsule") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (anterior median fissure of spinal cord) AnnotationAssertion(Annotation( "ncithesaurus:Anterior_Median_Fissure_of_Spinal_Cord") "A fissure in the midline of the anterior surface of the spinal cord.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:83735") AnnotationAssertion( "NCIT:C32096") AnnotationAssertion(Annotation( "FMA:83735") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "fissura mediana anterior medullae spinalis") AnnotationAssertion(Annotation( "FMA:83735") "ventral median fissure of spinal cord") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035319") AnnotationAssertion(rdfs:label "anterior median fissure of spinal cord") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (right common iliac artery) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:14765") AnnotationAssertion( "NCIT:C33474") AnnotationAssertion(Annotation( "FMA:14765") "trunk of right common iliac arterial tree") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035322") AnnotationAssertion(rdfs:label "right common iliac artery") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (upper outer quadrant of breast) AnnotationAssertion(Annotation( "ncithesaurus:Upper-outer_Quadrant_of_the_Breast") "The quarter of the breast which is superior and lateral.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:61380") AnnotationAssertion( "NCIT:C12303") AnnotationAssertion(Annotation( "FMA:61380") "upper outer quadrant of female breast") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035328") AnnotationAssertion(rdfs:label "upper outer quadrant of breast") SubClassOf( ) SubClassOf( ) # Class: (base of prostate) AnnotationAssertion(Annotation( "ncithesaurus:Base_of_the_Prostate") "The uppermost part of the prostate gland adjacent to the bladder wall.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:19595") AnnotationAssertion( "NCIT:C13088") AnnotationAssertion(Annotation( "FMA:19595") "base of prostate gland") AnnotationAssertion(Annotation( "FMA:19595") "prostatic base") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035331") AnnotationAssertion(rdfs:label "base of prostate") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (sphenoparietal sinus) AnnotationAssertion(Annotation( ) "The cavernous sinus receives the superior ophthalmic vein through the superior orbital fissure, some of the cerebral veins, and also the small sphenoparietal sinus, which courses along the under surface of the small wing of the sphenoid.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:50776") AnnotationAssertion( "NCIT:C33585") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035338") AnnotationAssertion(rdfs:label "sphenoparietal sinus") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (posterior lobe of prostate) AnnotationAssertion(Annotation( "ncithesaurus:Posterior_Lobe_of_the_Prostate") "The prostate gland lobe that is located on the posterior side of the organ.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:19575") AnnotationAssertion( "NCIT:C13093") AnnotationAssertion(Annotation( "FMA:19575") "posterior lobe of prostate gland") AnnotationAssertion(Annotation( "FMA:19575") "posterior peripheral zone") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035341") AnnotationAssertion(rdfs:label "posterior lobe of prostate") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (obsolete synapse) AnnotationAssertion( "GO:0045202") AnnotationAssertion( "FMA:67408") AnnotationAssertion( "NCIT:C13281") AnnotationAssertion( "SCTID:362298009") AnnotationAssertion( "UMLS:C0039062") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035344") AnnotationAssertion(rdfs:label "obsolete synapse") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (branch of middle cerebral artery) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:50081") AnnotationAssertion( "NCIT:C33114") AnnotationAssertion(Annotation( "FMA:50081") "middle cerebral arterial branch") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035350") AnnotationAssertion(rdfs:label "branch of middle cerebral artery") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (branch of brachial artery) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:22693") AnnotationAssertion( "NCIT:C32227") AnnotationAssertion(Annotation( "FMA:22693") "brachial arterial branch") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035359") AnnotationAssertion(rdfs:label "branch of brachial artery") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lower outer quadrant of breast) AnnotationAssertion(Annotation( "ncithesaurus:Lower-outer_Quadrant_of_the_Breast") "The quarter of the breast which is inferior and lateral.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:61376") AnnotationAssertion( "NCIT:C12304") AnnotationAssertion(Annotation( "FMA:61376") "lower outer quadrant of female breast") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035365") AnnotationAssertion(rdfs:label "lower outer quadrant of breast") SubClassOf( ) SubClassOf( ) # Class: (anterior surface of kidney) AnnotationAssertion(Annotation( "ncithesaurus:Anterior_Surface_of_the_Kidney") "The aspect of the kidney facing the abdominal cavity.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:15589") AnnotationAssertion( "NCIT:C32107") AnnotationAssertion(Annotation( "FMA:15589") "facies anterior (Ren)") AnnotationAssertion(Annotation( "FMA:15589") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "facies anterior renis") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035368") AnnotationAssertion(rdfs:label "anterior surface of kidney") SubClassOf( ) SubClassOf(Annotation( "ncithesaurus"^^xsd:string) ObjectSomeValuesFrom( )) DisjointClasses(Annotation( "lexical"^^xsd:string) ) # Class: (retroperitoneal lymph node) AnnotationAssertion(Annotation( "ncithesaurus:Retroperitoneal_Lymph_Node") "A lymph node located in the retroperitoneal space.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:16694") AnnotationAssertion( "NCIT:C98189") AnnotationAssertion(Annotation( "FMA:16694") "retroperitoneal node") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035371") AnnotationAssertion(rdfs:label "retroperitoneal lymph node") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (small cardiac vein) AnnotationAssertion(Annotation( "ncithesaurus:Small_Cardiac_Vein") "A vein running parallel to the right coronary artery in the coronary sulcus that drains into the right extremity of the coronary sinus.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:4714") AnnotationAssertion( "NCIT:C12881") AnnotationAssertion(Annotation( "FMA:4714") "right cardiac vein") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035374") AnnotationAssertion(rdfs:label "small cardiac vein") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf(Annotation( "ncithesaurus"^^xsd:string) ) # Class: (transverse fold of rectum) AnnotationAssertion(Annotation( ) "One of the semi-lunar transverse folds of the rectal wall that protrude into the anal canal.") AnnotationAssertion( "Their use seems to be to support the weight of fecal matter, and prevent its urging toward the anus, which would produce a strong urge to defecate") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:15722") AnnotationAssertion( "NCIT:C33807") AnnotationAssertion(Annotation( "FMA:15722") "horizontal fold of rectum") AnnotationAssertion(Annotation( "FMA:15722") "transverse rectal fold") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035377") AnnotationAssertion(rdfs:label "transverse fold of rectum") SubClassOf( ) SubClassOf(Annotation( "ncithesaurus"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (branch of anterior cerebral artery) AnnotationAssertion(Annotation( "ncithesaurus:Anterior_Cerebral_Artery_Branch") "An arterial branch arising from the anterior cerebral artery. It includes the callosomarginal artery, frontopolar artery, medial orbitofrontal artery, pericallosal artery, and recurrent artery of Heubner.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:50031") AnnotationAssertion( "NCIT:C32082") AnnotationAssertion(Annotation( "FMA:50031") "anterior cerebral arterial branch") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035380") AnnotationAssertion(rdfs:label "branch of anterior cerebral artery") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses(Annotation( "lexical"^^xsd:string) ) # Class: (lateral wall of nasopharynx) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:54908") AnnotationAssertion( "NCIT:C12244") AnnotationAssertion(Annotation( "FMA:54908") "lateral nasopharynx") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035383") AnnotationAssertion(rdfs:label "lateral wall of nasopharynx") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (space of Mall) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:70118") AnnotationAssertion( "NCIT:C33580") AnnotationAssertion(Annotation( "FMA:70118") "mall space") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035386") AnnotationAssertion(rdfs:label "space of Mall") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (cystic vein) AnnotationAssertion(Annotation( "ncithesaurus:Cystic_Vein") "A blood vessel carrying deoxygenated blood from the gallbladder and the cystic duct into the right branch of the portal vein.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:15403") AnnotationAssertion( "NCIT:C32422") AnnotationAssertion(Annotation( "FMA:15403") "cholecystic vein") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035392") AnnotationAssertion(rdfs:label "cystic vein") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (branch of left coronary artery) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:66328") AnnotationAssertion( "NCIT:C32958") AnnotationAssertion(Annotation( "FMA:66328") "left coronary arterial branch") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035395") AnnotationAssertion(rdfs:label "branch of left coronary artery") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (branch of external carotid artery) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:70505") AnnotationAssertion( "NCIT:C32552") AnnotationAssertion(Annotation( "FMA:70505") "external carotid arterial subdivision") AnnotationAssertion(Annotation( "FMA:70505") "subdivision of external carotid artery") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035398") AnnotationAssertion(rdfs:label "branch of external carotid artery") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (posterior wall of nasopharynx) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:54907") AnnotationAssertion( "NCIT:C12243") AnnotationAssertion(Annotation( "FMA:54907") "posterior nasopharynx") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035401") AnnotationAssertion(rdfs:label "posterior wall of nasopharynx") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (hypophysial artery) AnnotationAssertion(Annotation( ) "An artery that supplies the pituitary gland.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035403") AnnotationAssertion(rdfs:label "hypophysial artery") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (superior hypophysial artery) AnnotationAssertion(Annotation( ) "The superior hypophysial artery is an artery supplying the pars tuberalis,the infundibulum of the pituitary gland and the median eminence. It is a branch of the posterior communicating artery which branches from the internal carotid artery in the circle of Willis..") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:49849") AnnotationAssertion( "NCIT:C33678") AnnotationAssertion(Annotation( "FMA:49849") "superior hypophyseal artery") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035404") AnnotationAssertion(rdfs:label "superior hypophysial artery") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (left inguinal part of abdomen) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:24037") AnnotationAssertion( "NCIT:C32963") AnnotationAssertion(Annotation( "FMA:24037") "left iliac fossa viewed surgically") AnnotationAssertion(Annotation( "FMA:24037") "left iliac region") AnnotationAssertion(Annotation( "FMA:24037") "left inguinal region") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035410") AnnotationAssertion(rdfs:label "left inguinal part of abdomen") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (diaphragma sellae) AnnotationAssertion(Annotation( ) "The diaphragma sellae or sellar diaphragm is the circular fold of dura mater that almost completely roofs the fossa hypophyseos in the sphenoid bone of the skull. It retains the pituitary gland in the fossa hypophyseos, with only the infundibulum of the pituitary gland passing through it.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:78540") AnnotationAssertion( "NCIT:C32459") AnnotationAssertion(Annotation( "FMA:78540") "sellar diaphragm") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035416") AnnotationAssertion(rdfs:label "diaphragma sellae") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "ncithesaurus"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (anterior longitudinal ligament) AnnotationAssertion(Annotation( "ncithesaurus:Anterior_Longitudinal_Ligament") "A ligament running the length of the anterior surface of the spinal column and thereby interconnects all the vertebral bodies.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:31893") AnnotationAssertion( "NCIT:C32095") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035419") AnnotationAssertion(rdfs:label "anterior longitudinal ligament") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (circumflex branch of left coronary artery) AnnotationAssertion(Annotation( "FMA:3895") "Branch of left coronary artery which runs perpendicular to the anterior interventricular branch of the left coronary artery on the left side of the interventricular sulcus and supplies the left side of the heart.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:3895") AnnotationAssertion( "NCIT:C12874") AnnotationAssertion(Annotation( "FMA:3895") "circumflex coronary artery") AnnotationAssertion(Annotation( "FMA:3895") "left circumflex branch of left coronary artery") AnnotationAssertion(Annotation( "FMA:3895") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "ramus circumflexus (arteria coronaria sinistra)") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035422") AnnotationAssertion(rdfs:label "circumflex branch of left coronary artery") SubClassOf( ) # Class: (falx cerebelli) AnnotationAssertion(Annotation( "ncithesaurus:Falx_Cerebelli") "A small triangular process of dura matter beginning at the internal occipital crest just beneath the tentorium and projecting forward.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:83974") AnnotationAssertion( "NCIT:C32584") AnnotationAssertion(Annotation( "FMA:83974") "cerebellar falx") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035425") AnnotationAssertion(rdfs:label "falx cerebelli") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "ncithesaurus"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (postcapillary venule) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:63191") AnnotationAssertion( "NCIT:C33345") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035428") AnnotationAssertion(rdfs:label "postcapillary venule") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (mediastinal pleura) AnnotationAssertion(Annotation( "ncithesaurus:Mediastinal_Pleura") "The parietal pleura that lines the mediastinum.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:9736") AnnotationAssertion( "NCIT:C94820") AnnotationAssertion(Annotation( "FMA:9736") "mediastinal part of parietal pleura") AnnotationAssertion(Annotation( "FMA:9736") "pars mediastinalis (pleurae)") AnnotationAssertion(Annotation( "FMA:9736") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "pars mediastinalis pleurae parietalis") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035431") AnnotationAssertion(rdfs:label "mediastinal pleura") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (right suprarenal vein) AnnotationAssertion(Annotation( "ncithesaurus:Right_Suprarenal_Vein") "A vein that drains blood from the right adrenal gland into the inferior vena cava.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:14343") AnnotationAssertion( "NCIT:C53131") AnnotationAssertion(Annotation( "FMA:14343") "vena suprarenalis (adrenalis) dextra") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035435") AnnotationAssertion(rdfs:label "right suprarenal vein") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (mucoid tissue) AnnotationAssertion(Annotation( "FMA:20111") "Loose connective tissue, the intercellular matrix of which consists predominantly of mucoid ground substance. Examples: Mucoid tissue of umbilical cord, mucoid tissue of vitreous body, mucoid tissue of nucleus pulposus.") AnnotationAssertion(Annotation( "ncit"^^xsd:string) "ncit restricts to umbilical cord") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:20111") AnnotationAssertion( "NCIT:C34213") AnnotationAssertion(Annotation( "FMA:20111") "mucous connective tissue") AnnotationAssertion(Annotation( "FMA:20111") "mucous tissue") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035438") AnnotationAssertion(rdfs:label "mucoid tissue") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (apex of prostate) AnnotationAssertion(Annotation( "ncithesaurus:Apex_of_the_Prostate") "The lowest part of the prostate gland adjacent to the superior fascia of the urogenital diaphragm.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:19594") AnnotationAssertion( "NCIT:C13087") AnnotationAssertion(Annotation( "FMA:19594") "apex of prostate gland") AnnotationAssertion(Annotation( "FMA:19594") "prostatic apex") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035441") AnnotationAssertion(rdfs:label "apex of prostate") SubClassOf( ) SubClassOf(Annotation( "ncithesaurus"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (triangular ligament of liver) AnnotationAssertion(Annotation( "FMA:15821") "triangular ligament") AnnotationAssertion( ) AnnotationAssertion( "FMA:15821") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035444") AnnotationAssertion(rdfs:label "triangular ligament of liver") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (urogenital diaphragm) AnnotationAssertion(Annotation( ) "Muscular components of the deep perineal pouch.") AnnotationAssertion( "consider obsoletion") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:19734") AnnotationAssertion( "NCIT:C33810") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035445") AnnotationAssertion(rdfs:label "urogenital diaphragm") SubClassOf(Annotation( "ncithesaurus"^^xsd:string) ) SubClassOf( ) SubClassOf(Annotation( "ncithesaurus"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (cervical part of esophagus) AnnotationAssertion(Annotation( "ncithesaurus:Cervical_Esophagus") "Clinical esophageal segment composed of skeletal muscle. It corresponds to the superior part of the upper third topographic segment of the esophagus.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:9395") AnnotationAssertion( "NCIT:C12250") AnnotationAssertion(Annotation( "FMA:9395") "cervical esophagus") AnnotationAssertion(Annotation( "FMA:9395") "cervical part of oesophagus") AnnotationAssertion(Annotation( "FMA:9395") "pars cervicalis (oesophagus)") AnnotationAssertion(Annotation( "FMA:9395") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "pars cervicalis oesophageae") AnnotationAssertion(Annotation( "FMA:9395") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "pars colli oesophageae") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035450") AnnotationAssertion(rdfs:label "cervical part of esophagus") SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (laryngeal ventricle) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:64171") AnnotationAssertion( "NCIT:C32935") AnnotationAssertion(Annotation( "FMA:64171") "ventricle of Morgagni") AnnotationAssertion(Annotation( "FMA:64171") "ventricle of larynx") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035453") AnnotationAssertion(rdfs:label "laryngeal ventricle") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "ncithesaurus"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (anterior parietal artery) AnnotationAssertion(Annotation( "ncithesaurus:Anterior_Parietal_Artery") "The artery that delivers blood to the anterior portion of the parietal lobe.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:50485") AnnotationAssertion( "NCIT:C32101") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035462") AnnotationAssertion(rdfs:label "anterior parietal artery") SubClassOf( ) # Class: (endometrial cavity) AnnotationAssertion(Annotation( "ncithesaurus:Endometrial_Cavity") "A space inside the uterus lined by a layer of mucus membranes called the endometrium.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:18076") AnnotationAssertion( "NCIT:C32514") AnnotationAssertion(Annotation( "FMA:18076") "cavity of body of uterus") AnnotationAssertion(Annotation( "FMA:18076") "endometrial cavity") AnnotationAssertion( "endometrial lumen") AnnotationAssertion(Annotation( "FMA:18076") "intrauterine cavity") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035465") AnnotationAssertion(rdfs:label "endometrial cavity") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (costodiaphragmatic recess) AnnotationAssertion(Annotation( "ncithesaurus:Costophrenic_Angle") "The angled junction where the diaphragm meets the chest wall.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:11355") AnnotationAssertion( "NCIT:C32393") AnnotationAssertion(Annotation( "FMA:11355") "costophrenic angle") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035468") AnnotationAssertion(rdfs:label "costodiaphragmatic recess") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "ncithesaurus"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (posterior surface of kidney) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:15590") AnnotationAssertion( "NCIT:C32895") AnnotationAssertion(Annotation( "FMA:15590") "facies posterior (Ren)") AnnotationAssertion(Annotation( "FMA:15590") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "facies posterior renis") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035471") AnnotationAssertion(rdfs:label "posterior surface of kidney") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (right subcostal vein) AnnotationAssertion(Annotation( "ncithesaurus:Right_Subcostal_Vein") "A vein that extends along the bottom of the twelfth rib on the right side of the body.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:4844") AnnotationAssertion( "NCIT:C53123") AnnotationAssertion(Annotation( "FMA:4844") "vena subcostalis dextra") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035474") AnnotationAssertion(rdfs:label "right subcostal vein") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lower inner quadrant of breast) AnnotationAssertion(Annotation( "ncithesaurus:Lower-inner_Quadrant_of_the_Breast") "The quarter of the breast which is inferior and medial.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:61377") AnnotationAssertion( "NCIT:C12302") AnnotationAssertion(Annotation( "FMA:61377") "lower inner quadrant of female breast") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035477") AnnotationAssertion(rdfs:label "lower inner quadrant of breast") SubClassOf( ) SubClassOf( ) # Class: (surface of prostate) AnnotationAssertion(Annotation( "ncithesaurus:Surface_of_the_Prostate") "The external portion of the prostate including the anterior, inferolateral, lateral and posterior surfaces.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:19590") AnnotationAssertion( "NCIT:C13091") AnnotationAssertion(Annotation( "FMA:19590") "prostatic surface") AnnotationAssertion(Annotation( "FMA:19590") "surface of prostate gland") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035480") AnnotationAssertion(rdfs:label "surface of prostate") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (left suprarenal vein) AnnotationAssertion(Annotation( "ncithesaurus:Left_Suprarenal_Vein") "A vein that drains blood from the left adrenal gland into the left renal artery.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:14349") AnnotationAssertion( "NCIT:C53138") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035483") AnnotationAssertion(rdfs:label "left suprarenal vein") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (branch of basilar artery) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:76269") AnnotationAssertion( "NCIT:C32195") AnnotationAssertion(Annotation( "FMA:76269") "basilar arterial branch") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035489") AnnotationAssertion(rdfs:label "branch of basilar artery") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (inferior hypophysial artery) AnnotationAssertion(Annotation( ) "The inferior hypophysial artery is an artery supplying the pituitary gland. It is a branch of the cavernous carotid artery (internal carotid artery).") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:49846") AnnotationAssertion( "NCIT:C32777") AnnotationAssertion(Annotation( "FMA:49846") "inferior hypophyseal artery") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035492") AnnotationAssertion(rdfs:label "inferior hypophysial artery") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (hilum of lymph node) AnnotationAssertion(Annotation( "ncithesaurus:Lymph_Node_Hilum") "The concave side of the lymph node.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:62842") AnnotationAssertion( "NCIT:C33031") AnnotationAssertion(Annotation( "FMA:62842") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "hilum nodi lymphoidei") AnnotationAssertion(Annotation( "FMA:62842") "lymph node hilum") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035495") AnnotationAssertion(rdfs:label "hilum of lymph node") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (gastrophrenic ligament) AnnotationAssertion(Annotation( ) "The portion of the greater omentum that extends from the greater curvature of the stomach to the inferior surface of the diaphragm.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:16518") AnnotationAssertion( "NCIT:C32670") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035498") AnnotationAssertion(rdfs:label "gastrophrenic ligament") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (unencapsulated tactile receptor) AnnotationAssertion(Annotation( "ncithesaurus:Free_Nerve_Ending") "Free nerve endings are widely distributed throughout the body, and are found as branches of unmyelinated, or lightly myelinated fibres grouped in bundles beneath the epithelium. As they penetrate the epithelium, they lose their myelin, and branch among the epithelial cells. Branches of one nerve may cover a wide area and overlap the territories of other nerves. The free nerve endings detect pain, touch, pressure and temperature, and are associated with C fibres.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:84005") AnnotationAssertion( "NCIT:C13174") AnnotationAssertion(Annotation( "FMA:84005") "free nerve ending") AnnotationAssertion(Annotation( "FMA:84005") "unencapsulated nerve ending") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035501") AnnotationAssertion(rdfs:label "unencapsulated tactile receptor") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf(Annotation( "ncithesaurus"^^xsd:string) ObjectSomeValuesFrom( )) DisjointClasses( ) # Class: (right inguinal part of abdomen) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:24036") AnnotationAssertion( "NCIT:C33479") AnnotationAssertion(Annotation( "FMA:24036") "right iliac fossa viewed surgically") AnnotationAssertion(Annotation( "FMA:24036") "right iliac region") AnnotationAssertion(Annotation( "FMA:24036") "right inguinal region") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035505") AnnotationAssertion(rdfs:label "right inguinal part of abdomen") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (branch of posterior cerebral artery) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:50586") AnnotationAssertion( "NCIT:C33351") AnnotationAssertion(Annotation( "FMA:50586") "posterior cerebral arterial branch") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035508") AnnotationAssertion(rdfs:label "branch of posterior cerebral artery") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (special sense organ system) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:7189") AnnotationAssertion( "NCIT:C13058") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035514") AnnotationAssertion(rdfs:label "special sense organ system") SubClassOf( ) # Class: (anterior mediastinal lymph node) AnnotationAssertion(Annotation( "ncithesaurus:Anterior_Mediastinal_Lymph_Node") "A lymph node located in the superior mediastinum that collects lymph from the thymus, the pericardium, and the right side of the heart.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:12775") AnnotationAssertion( "NCIT:C32097") AnnotationAssertion(Annotation( "FMA:12775") "anterior mediastinal node") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035520") AnnotationAssertion(rdfs:label "anterior mediastinal lymph node") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (anterior surface of prostate) AnnotationAssertion(Annotation( "ncithesaurus:Anterior_Surface_of_the_Prostate") "The aspect of the prostate facing the pubic symphysis.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:19591") AnnotationAssertion( "NCIT:C13089") AnnotationAssertion(Annotation( "FMA:19591") "anterior surface of prostate gland") AnnotationAssertion(Annotation( "FMA:19591") "facies anterior (prostatae)") AnnotationAssertion(Annotation( "FMA:19591") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "facies anterior prostatae") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035523") AnnotationAssertion(rdfs:label "anterior surface of prostate") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (superficial fibular nerve) AnnotationAssertion(Annotation( ) Annotation( "UBERON:cjm"^^xsd:string) Annotation( "ncithesaurus:Superficial_Peroneal_Nerve") "A branch of the common fibular nerve that innervates the fibularis longus and brevis muscles, and via branches innervates parts of the dorsal part of the pes.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:44699") AnnotationAssertion( "NCIT:C92603") AnnotationAssertion(Annotation( "FMA:44699") "superficial peroneal nerve") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035526") AnnotationAssertion(rdfs:label "superficial fibular nerve") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (left common iliac artery) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:14766") AnnotationAssertion( "NCIT:C32957") AnnotationAssertion(Annotation( "FMA:14766") "trunk of left common iliac arterial tree") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035529") AnnotationAssertion(rdfs:label "left common iliac artery") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (basal vein) AnnotationAssertion(Annotation( ) "The basal vein is formed at the anterior perforated substance by the union of (a) a small anterior cerebral vein which accompanies the anterior cerebral artery and supplies the medial surface of the frontal lobe by the fronto-basal vein. (b) the deep middle cerebral vein (deep Sylvian vein), which receives tributaries from the insula and neighboring gyri, and runs in the lower part of the lateral cerebral fissure, and (c) the inferior striate veins, which leave the corpus striatum through the anterior perforated substance. The basal vein passes backward around the cerebral peduncle, and ends in the internal cerebral vein; it receives tributaries from the interpeduncular fossa, the inferior horn of the lateral ventricle, the hippocampal gyrus, and the mid-brain.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:50990") AnnotationAssertion(Annotation( "FMA:50990") "basal vein of rosenthal") AnnotationAssertion(Annotation( "FMA:50990") "rosenthal's vein") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "basal veins") AnnotationAssertion(Annotation( ) "inferior striate vein") AnnotationAssertion(Annotation( ) "inferior striate veins") AnnotationAssertion( "UBERON:0035530") AnnotationAssertion(rdfs:label "basal vein") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (deep middle cerebral vein) AnnotationAssertion(Annotation( "ncithesaurus:Deep_Middle_Cerebral_Vein") "The blood vessel that receives deoxygenated blood from the insula and gyri and drains into the basal vein of Rosenthal deep in the lateral sulcus.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:51309") AnnotationAssertion( "NCIT:C32440") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035532") AnnotationAssertion(rdfs:label "deep middle cerebral vein") SubClassOf(Annotation( "ncithesaurus"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (body of gallbladder) AnnotationAssertion(Annotation( "ncithesaurus:Gallbladder_Body") "The middle portion of the gallbladder which is distal to the gallbladder neck and proximal to the gallbladder fundus.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:14537") AnnotationAssertion( "NCIT:C32647") AnnotationAssertion(Annotation( "FMA:14537") "gallbladder body") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035536") AnnotationAssertion(rdfs:label "body of gallbladder") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (esophageal artery) AnnotationAssertion(Annotation( "ncithesaurus:Esophageal_Artery") "Any of several arteries that arise from the aorta and supply blood to the esophagus.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:4149") AnnotationAssertion( "NCIT:C32535") AnnotationAssertion(Annotation( "FMA:4149") "aortic esophageal artery") AnnotationAssertion(Annotation( "FMA:4149") "oesophageal artery") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035539") AnnotationAssertion(rdfs:label "esophageal artery") SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (upper inner quadrant of breast) AnnotationAssertion(Annotation( "ncithesaurus:Upper-inner_Quadrant_of_the_Breast") "The quarter of the breast which is superior and medial.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:61375") AnnotationAssertion( "NCIT:C12301") AnnotationAssertion(Annotation( "FMA:61375") "upper inner quadrant of female breast") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035542") AnnotationAssertion(rdfs:label "upper inner quadrant of breast") SubClassOf( ) SubClassOf( ) # Class: (deep lymphatic vessel) AnnotationAssertion(Annotation( "ncithesaurus:Deep_Lymphatic_Vessel") "The tubules that carry lymph throughout the body that are in the interior of the body or limbs.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:52012") AnnotationAssertion( "NCIT:C32439") AnnotationAssertion(Annotation( "FMA:52012") "deep lymph vessel") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035545") AnnotationAssertion(rdfs:label "deep lymphatic vessel") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (uveal vein) AnnotationAssertion( ) AnnotationAssertion( "FMA:51797") AnnotationAssertion(Annotation( "FMA:51797") "ciliary vein") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035546") AnnotationAssertion(rdfs:label "uveal vein") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (posterior ciliary vein) AnnotationAssertion(Annotation( ) "The outer layer of the choroid (lamina vasculosa) consists, in part, of the larger branches of the short ciliary arteries which run forward between the veins, before they bend inward to end in the capillaries, but is formed principally of veins, named, from their arrangement, the vorticose veins. They converge to four or five equidistant trunks, which pierce the sclera about midway between the sclero-corneal junction and the entrance of the optic nerve. They drain uveal tract.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:51796") AnnotationAssertion(Annotation( "FMA:51796") "vorticose vein") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "posterior veins") AnnotationAssertion(Annotation( ) "venae vorticasae") AnnotationAssertion(Annotation( ) "venae vorticosae") AnnotationAssertion(Annotation( ) "venea vorticosae") AnnotationAssertion(Annotation( ) "vortex vein") AnnotationAssertion(Annotation( ) "vortex veins") AnnotationAssertion(Annotation( ) "vorticosae") AnnotationAssertion(Annotation( ) "vorticose vein") AnnotationAssertion( "UBERON:0035547") AnnotationAssertion(rdfs:label "posterior ciliary vein") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (colic artery) AnnotationAssertion( ) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035548") AnnotationAssertion(rdfs:label "colic artery") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (vasculature of integument) AnnotationAssertion(Annotation( ) "The part of the circulatory system that lies within the subcutaneous tissue layers close to the surface of the skin.") AnnotationAssertion( "FMA:225275") AnnotationAssertion( "superficial part of circulatory system") AnnotationAssertion( "superficial vasculature") AnnotationAssertion( "dermis vasculature") AnnotationAssertion( "hypodermis vasculature") AnnotationAssertion( "uberon") AnnotationAssertion( "skin vasculature") AnnotationAssertion( "subcutaneous vasculature") AnnotationAssertion(Annotation( "FMA:225275") "vasculature of skin") AnnotationAssertion( "UBERON:0035549") AnnotationAssertion(rdfs:label "vasculature of integument") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (superficial vein) AnnotationAssertion(Annotation( "ncithesaurus:Superficial_Vein") "Any of the veins carrying deoxygenated blood from the subcutaneous tissue layers.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:76719") AnnotationAssertion( "NCIT:C33666") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "superfical vein") AnnotationAssertion(Annotation( ) "superficial veins") AnnotationAssertion(Annotation( ) "superficial vessels") AnnotationAssertion( "UBERON:0035550") AnnotationAssertion(rdfs:label "superficial vein") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (deep vasculature) AnnotationAssertion(Annotation( ) "The part of the circulatory system that lies deep beneath the subcutaneous tissue layers away from the surface of the skin.") AnnotationAssertion( "deep part of circulatory system") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035551") AnnotationAssertion(rdfs:label "deep vasculature") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (deep vein) AnnotationAssertion(Annotation( "ncithesaurus:Deep_Vein") "A blood vessel carrying deoxygenated blood far beneath the skin usually accompanying an artery.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:76718") AnnotationAssertion( "NCIT:C32444") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "deep veins") AnnotationAssertion(Annotation( ) "deep vessels") AnnotationAssertion( "UBERON:0035552") AnnotationAssertion(rdfs:label "deep vein") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (left cardiac chamber) AnnotationAssertion(Annotation( ) "Any chamber of the left side of the heart.") AnnotationAssertion( ) AnnotationAssertion( "FMA:7166") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035553") AnnotationAssertion(rdfs:label "left cardiac chamber") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (right cardiac chamber) AnnotationAssertion(Annotation( ) "Any chamber of the right side of the heart.") AnnotationAssertion( ) AnnotationAssertion( "FMA:7165") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035554") AnnotationAssertion(rdfs:label "right cardiac chamber") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete fascia dentata) AnnotationAssertion(Annotation( ) "OBSOLETE: The fascia dentata is the earliest stage of the hippocampal circuit. Its primary input is the perforant path from the superficial layers of entorhinal cortex. Its principal neurons are tiny granule cells which give rise to unmyelinated axons called the mossy fibers which project to the hilus and CA3. The fascia dentata of the rat contains approximately 1,000,000 granule cells. It receives feedback connections from mossy cells in the hilus at distant levels in the septal and temporal directions. The fascia dentata and the hilus together make up the dentate gyrus. As with all regions of the hippocampus, the dentate gyrus also receives GABAergic and cholinergic input from the medial septum and the diagonal band of Broca.") AnnotationAssertion( "A quick perusal of definitions for fascia dentata suggests that it is sometimes used to refer to the entire dentate gyrus, in which case it should be a synonym, and sometimes to a specific cytoarchitectural field of dentate gyrus. More research is needed. In the meanwhile, I have not assigned it as a part of dentate gyrus, assigning instead the cytoarchitectural layers. (Maryann Martone)") AnnotationAssertion( "UBERON:0001885") AnnotationAssertion( "BIRNLEX:1191") AnnotationAssertion( "BTO:0002615") AnnotationAssertion( "Wikipedia:Fascia_dentata") AnnotationAssertion( "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=180") AnnotationAssertion( ) AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BIRNLEX:1191") "fascia dentata") AnnotationAssertion(Annotation( "BIRNLEX:1191") "fascia dentata (crosby)") AnnotationAssertion(Annotation( "BIRNLEX:1191") "fascia dentata hippocampi (shantha)") AnnotationAssertion( "UBERON:0035560") AnnotationAssertion(rdfs:comment "This class has been retired. Based on usage and FMA, we have added fascia dentata as a synonym for dentate gyrus. (Maryann Martone)[NIFSTD]") AnnotationAssertion(rdfs:label "obsolete fascia dentata") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (styliform element) AnnotationAssertion(Annotation( ) Annotation( ) "An unjointed, rod-like bony or cartilaginous structures that extend from distal limb joints in tetrapods.") AnnotationAssertion( "in some mammals this is found in a cartilaginous state, and articulates with the lateral border of the carpus.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035561") AnnotationAssertion(rdfs:label "styliform element") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (intermediate pretectal nucleus) AnnotationAssertion( "DMBA:16598") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "DMBA:16598") Annotation( ) "IPT") AnnotationAssertion( "UBERON:0035562") AnnotationAssertion(rdfs:label "intermediate pretectal nucleus") SubClassOf( ) # Class: (tectothalamic tract) AnnotationAssertion( ) AnnotationAssertion( "MBA:357") AnnotationAssertion(Annotation( "NeuroNames:1424") "tectothalamic fibers") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:1424") "tectothalamic fibers") AnnotationAssertion(Annotation( "NeuroNames:1424") "tectothalamic pathway") AnnotationAssertion(Annotation( "NeuroNames:1424") "tectothalamic tract") AnnotationAssertion(Annotation( "MBA:357") Annotation( ) "ttp") AnnotationAssertion( "UBERON:0035570") AnnotationAssertion(rdfs:label "tectothalamic tract") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (nucleus praetectalis profundus) AnnotationAssertion(Annotation( "ISBN:0471888893"^^xsd:string) "A neural nucleus of the pretectal region that lies lateral to the posterior commissure and gives rise to widespread projections.") AnnotationAssertion( ) AnnotationAssertion(Annotation( ) "nucleus pratectalis profundus") AnnotationAssertion( "profundal pretectal nucleus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035572") AnnotationAssertion(rdfs:label "nucleus praetectalis profundus") SubClassOf( ) # Class: (paracommissural nucleus of solitary tract) AnnotationAssertion( "FMA:77466") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035575") AnnotationAssertion(rdfs:label "paracommissural nucleus of solitary tract") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (accessory optic system) AnnotationAssertion(Annotation( ) Annotation( "ISBN:0471888893"^^xsd:string) "Subdivision of visual system that processes movements of images across retina and regulates the movement of eyes to keep the image stable.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035594") AnnotationAssertion(rdfs:label "accessory optic system") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (accessory optic tract) AnnotationAssertion( ) AnnotationAssertion( "MBA:876") AnnotationAssertion( "uberon") AnnotationAssertion( "accessory optic fibers") AnnotationAssertion(Annotation( "MBA:876") Annotation( ) "aot") AnnotationAssertion( "UBERON:0035595") AnnotationAssertion(rdfs:label "accessory optic tract") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (circular nucleus of antherior hypothalamic nucleus) AnnotationAssertion(Annotation( "NeuroNames:1853") "A group of cells located in the central part of the anterior hypothalamic nucleus in the anterior hypothalamic region of the rat ( Swanson-2004 ) and the mouse ( Paxinos-2001 ). Functionally it belongs to the magnocellular neuroendocrine cell groups of the subcortical motor system ( Swanson-2004 ).") AnnotationAssertion(Annotation( "MBA:432") Annotation( ) "nucleus circularis") AnnotationAssertion( ) AnnotationAssertion( "MBA:432") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "MBA:432") Annotation( ) "NC") AnnotationAssertion(Annotation( "NeuroNames:1853") "circular nucleus") AnnotationAssertion( "UBERON:0035596") AnnotationAssertion(rdfs:comment "group of magnocellular elements arranged in a ring around a capillary bed. The cells are predominantly monopolar, tightly packed, and are flattened at the outer border of the ring. The entire nucleus is surrounded or encapsulated by myelinated fibers, hypothesized to be an osmoreceptor[PMID:974791]") AnnotationAssertion(rdfs:label "circular nucleus of antherior hypothalamic nucleus") SubClassOf( ) SubClassOf(Annotation( "MBA") ObjectSomeValuesFrom( )) # Class: (profundal placode) AnnotationAssertion(Annotation( ) Annotation( ) Annotation( "XAO:0004093") "An embryonic structure positioned halfway between the prospective eye and ear, adjacent to the future midbrain-hindbrain boundary. The profundal and the trigeminal ganglia are separate distally but fused at their proximal end as they condense around NF stage 24.") AnnotationAssertion( "XAO:0004093") AnnotationAssertion(Annotation( "NCBIBook:NBK53171") "ophthalmic lobe of trigeminal placode") AnnotationAssertion(Annotation( "NCBIBook:NBK53171") "ophthalmic lobe of trigeminal placode complex") AnnotationAssertion(Annotation( ) "ophthalmic placode") AnnotationAssertion(Annotation( "XAO:0004093") "profundus placode") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035597") AnnotationAssertion(rdfs:label "profundal placode") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (maxillomandibular placode) AnnotationAssertion(Annotation( "NCBIBook:NBK53171") "trigeminal placode") AnnotationAssertion(Annotation( "NCBIBook:NBK53171") "maxillomandibular lobe of trigeminal placode complex") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035598") AnnotationAssertion(rdfs:label "maxillomandibular placode") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (profundal part of trigeminal ganglion complex) AnnotationAssertion(Annotation( ) "ophthalmic ganglion") AnnotationAssertion(Annotation( ) "profundal ganglion") AnnotationAssertion( "uberon") AnnotationAssertion( "ophthalmic division of trigeminal ganglion") AnnotationAssertion( "ophthalmic part of trigeminal ganglion") AnnotationAssertion( "UBERON:0035599") AnnotationAssertion(rdfs:label "profundal part of trigeminal ganglion complex") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (maxillomandibular part of trigeminal ganglion complex) AnnotationAssertion(Annotation( ) "ophthalmic ganglion") AnnotationAssertion(Annotation( ) "profundal ganglion") AnnotationAssertion( "uberon") AnnotationAssertion( "maxillomandibular division of trigeminal ganglion") AnnotationAssertion( "maxillomandibular part of trigeminal ganglion") AnnotationAssertion( "UBERON:0035601") AnnotationAssertion(rdfs:label "maxillomandibular part of trigeminal ganglion complex") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (cartilage of external acoustic meatus) AnnotationAssertion( "FMA:61298") AnnotationAssertion(Annotation( "FMA:61298") "cartilage of acoustic meatus") AnnotationAssertion(Annotation( "FMA:61298") "cartilage of auditory canal") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) "cartilago meatus acustici") AnnotationAssertion(Annotation( "FMA:61298") "external acoustic meatus cartilage") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035606") AnnotationAssertion(rdfs:label "cartilage of external acoustic meatus") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (dura mater lymph vessel) AnnotationAssertion(Annotation( ) Annotation( ) "Any lymph vessel that is located in the dura mater of the brain.") AnnotationAssertion( "while Louveau et al (DOI:10.1038/nature14432) state this is within the CNS (thus overturning dogma about the presence of lymphatics in the CNS), in this ontology the dura") AnnotationAssertion( "dural lymph vessel") AnnotationAssertion( "uberon") AnnotationAssertion( "dural lymph vasculature") AnnotationAssertion( "UBERON:0035608") AnnotationAssertion(rdfs:comment "Louveau et al (DOI:10.1038/nature14432) claim the discovery of lymphatics in the cerebral dura mater, but this is disputed by Bucchieri et al (DOI:10.1111/joa.12381)") AnnotationAssertion(rdfs:label "dura mater lymph vessel") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (outer root sheath companion layer) AnnotationAssertion(Annotation( ) "The innermost layer of the outer root sheath.") AnnotationAssertion( "It contains cells that are morphologically and biochemically different from the inner root sheath and outer root sheath. The cells of the companion layer are more flattened than the other cells of the outer root sheath and do not contain glycogen. In addition, a novel human type II cytokeratin, K6hf, is specifically expressed in the companion layer of the hair follicle") AnnotationAssertion( "BTO:0003970") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035609") AnnotationAssertion(rdfs:label "outer root sheath companion layer") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "BTO"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (hair canal) AnnotationAssertion(Annotation( ) "Tubular connection between the epidermal surface and the most distal part of the inner root sheath. Contains the hair shaft.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035610") AnnotationAssertion(rdfs:label "hair canal") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (hair peg) AnnotationAssertion(Annotation( ) "Column of keratinocytes growing into the dermis during embryonic hair follicle development. The concave proximal end starts to encase the dermal condensate, the future dermal papilla.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035611") AnnotationAssertion(rdfs:label "hair peg") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (nasal turbinal) AnnotationAssertion(Annotation( ) Annotation( ) Annotation( "UBERON:cjm"^^xsd:string) "A skeletal element of the ethmoid region with complex morphology that are lined with mucuous membranes involved in either olfaction or air conditioning.") AnnotationAssertion( "consult http://www.ncbi.nlm.nih.gov/pubmed/25312359 to add missing structures, e.g. ectoturbinals") AnnotationAssertion( "unossified in dinosaurs[http://palaeos.com/vertebrates/bones/braincase/ethmoid.html]") AnnotationAssertion( "nasal turbinal") AnnotationAssertion( "nasal turbinal element") AnnotationAssertion( "nasal turbinate") AnnotationAssertion(Annotation( ) "turbinal") AnnotationAssertion( "turbinate") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "EMAPA:25093") "concha") AnnotationAssertion(Annotation( ) Annotation( ) "conchae nasales") AnnotationAssertion( "nasal concha") AnnotationAssertion( "UBERON:0035612") AnnotationAssertion(rdfs:label "nasal turbinal") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "ISBN:0073040584"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (peripharyngeal space) AnnotationAssertion(Annotation( "ISBN:0683400088") Annotation( "MGI:cs") "The space filled with loose areolar tissue surrounding the pharynx; it is divided into two major divisions, the parapharyngeal space and the retropharyngeal space.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:84964") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035617") AnnotationAssertion(rdfs:label "peripharyngeal space") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (parapharyngeal space) AnnotationAssertion(Annotation( "ISBN:0683400088") Annotation( "MGI:cs") "The portion of the peripharyngeal space limited by the lateral wall of the pharynx, the cervical vertebrae and medial pterygoid muscle.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "CALOHA:TS-2357") AnnotationAssertion( "FMA:55081") AnnotationAssertion(Annotation( "FMA:55081") "lateral pharyngeal space") AnnotationAssertion(Annotation( "FMA:55081") "parapharyngeal space") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) "spatium parapharyngeum") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "CALOHA:TS-2357") "lateral pharyngeal space") AnnotationAssertion( "UBERON:0035618") AnnotationAssertion(rdfs:label "parapharyngeal space") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (retropharyngeal space) AnnotationAssertion(Annotation( "ISBN:0683400088") Annotation( "MGI:cs") "The portion of the peripharyngeal space that is located posterior to the pharynx.") AnnotationAssertion( "FMA:84965") AnnotationAssertion(Annotation( "ISBN:0683400088") Annotation( "MGI:cs") "Henke's space") AnnotationAssertion(Annotation( "ISBN:0683400088") Annotation( "MGI:cs") "postpharyngeal space") AnnotationAssertion(Annotation( "FMA:84965") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "spatium retropharyngeum") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035619") AnnotationAssertion(rdfs:label "retropharyngeal space") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (quadrant of breast) AnnotationAssertion(Annotation( "UBERON:cjm"^^xsd:string) "The part of the breast that is bordered by the intermammary line and a perpendicular line bisecting the nipple.") AnnotationAssertion( "FMA:61373") AnnotationAssertion(Annotation( "FMA:61373") "breast quadrant") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035634") AnnotationAssertion(rdfs:label "quadrant of breast") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (upper quadrant of breast) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035635") AnnotationAssertion(rdfs:label "upper quadrant of breast") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lower quadrant of breast) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035636") AnnotationAssertion(rdfs:label "lower quadrant of breast") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (inner quadrant of breast) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035637") AnnotationAssertion(rdfs:label "inner quadrant of breast") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (outer quadrant of breast) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035638") AnnotationAssertion(rdfs:label "outer quadrant of breast") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (ocular adnexa) AnnotationAssertion(Annotation( ) Annotation( ) Annotation( "HPO:pr") Annotation( "UBERON:cjm"^^xsd:string) "The parts of the orbital region that are outside of the the eyeball, including the lacrimal apparatus, the extraocular muscles and the eyelids, eyelashes, eyebrows and the conjunctiva.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:76554") AnnotationAssertion( "NCIT:C32574") AnnotationAssertion(Annotation( ) Annotation( ) "adnexa oculi") AnnotationAssertion( "uberon") AnnotationAssertion( "accessory parts of orbital region") AnnotationAssertion(Annotation( ) "accessory visual structures") AnnotationAssertion(Annotation( "FMA:76554") "accessory visual structures") AnnotationAssertion(Annotation( "FMA:76554") "accessory visual structures set") AnnotationAssertion( "adnexal parts of orbital region") AnnotationAssertion(Annotation( ) "appendage of eye") AnnotationAssertion(Annotation( ) Annotation( ) "appendages of the eye") AnnotationAssertion( "eye adnexa") AnnotationAssertion(Annotation( "FMA:76554") "set of accessory visual structures") AnnotationAssertion(Annotation( ) Annotation( ) "structurae oculi accessoriae") AnnotationAssertion( "UBERON:0035639") AnnotationAssertion(rdfs:label "ocular adnexa") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (middle vesical artery) AnnotationAssertion(Annotation( ) "The middle vesical artery, usually a branch of the superior vesical artery, is distributed to the fundus of the bladder and the seminal vesicles.") AnnotationAssertion( ) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035640") AnnotationAssertion(rdfs:comment "This artery is not usually described in modern anatomy textbooks. Instead, it is described that the superior vesical artery may exist as multiple vessels that arise from a common origin") AnnotationAssertion(rdfs:label "middle vesical artery") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (laryngeal nerve) AnnotationAssertion(Annotation( "UBERON:cjm"^^xsd:string) "Any nerve that innervates the larynx.") AnnotationAssertion( ) AnnotationAssertion( "MESH:A08.800.050.050.925.450") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035642") AnnotationAssertion(rdfs:label "laryngeal nerve") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (anterior superior alveolar nerve) AnnotationAssertion(Annotation( ) "The anterior superior alveolar branch (anterior superior dental branch), of considerable size, is given off from the maxillary nerve just before its exit from the infraorbital foramen; it descends in a canal in the anterior wall of the maxillary sinus, and divides into branches which supply the incisor and canine teeth. It communicates with the middle superior alveolar branch, and gives off a nasal branch, which passes through a minute canal in the lateral wall of the inferior meatus, and supplies the mucous membrane of the anterior part of the inferior meatus and the floor of the nasal cavity, communicating with the nasal branches from the sphenopalatine ganglion.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:52935") AnnotationAssertion(Annotation( "FMA:52935") "anterior superior dental nerve") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "anterior superior alveolar branch") AnnotationAssertion( "UBERON:0035646") AnnotationAssertion(rdfs:label "anterior superior alveolar nerve") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (posterior auricular nerve) AnnotationAssertion(Annotation( ) "A branch of the facial nerve that innervates the posterior auricular and intrinsic muscles of the auricle and, through its occipital branch, innervates the occipital belly of the occipitofrontal muscle.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:53278") AnnotationAssertion(Annotation( "FMA:53278") "auricularis posterior branch of facial nerve") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "posterior auricular branch of the facial") AnnotationAssertion( "UBERON:0035647") AnnotationAssertion(rdfs:label "posterior auricular nerve") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA"^^xsd:string) Annotation( "Wikipedia"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (nerve innervating pinna) AnnotationAssertion(Annotation( "UBERON:cjm"^^xsd:string) "Any nerve that innervates the pinna.") AnnotationAssertion( "EMAPA:36513") AnnotationAssertion( "MA:0001232") AnnotationAssertion(Annotation( "MA:0001232") "auricular nerve") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035648") AnnotationAssertion(rdfs:label "nerve innervating pinna") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (nerve of penis) AnnotationAssertion(Annotation( "UBERON:cjm"^^xsd:string) "Any nerve that innervates the penis.") AnnotationAssertion( "EMAPA:35057") AnnotationAssertion( "penile nerve") AnnotationAssertion( "penis nerve") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035649") AnnotationAssertion(rdfs:label "nerve of penis") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (nerve of clitoris) AnnotationAssertion(Annotation( "UBERON:cjm"^^xsd:string) "Any nerve that innervates the clitoris.") AnnotationAssertion( "EMAPA:35044") AnnotationAssertion( "clitoral nerve") AnnotationAssertion( "clitoris nerve") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035650") AnnotationAssertion(rdfs:label "nerve of clitoris") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (glans) AnnotationAssertion( ) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035651") AnnotationAssertion(rdfs:label "glans") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (fibular nerve) AnnotationAssertion(Annotation( "UBERON:cjm"^^xsd:string) "Any nerve that innervates the fibularis. Includes the common fibular nerve, and its branches.") AnnotationAssertion( "EMAPA:36511") AnnotationAssertion( "MESH:A08.800.800.720.450.760.640") AnnotationAssertion( "peroneal nerve") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035652") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "fibular nerve") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (paraumbilical vein) AnnotationAssertion(Annotation( ) Annotation( ) Annotation( "ISBN:0683400088") Annotation( "MGI:cs") "The small superficial veins that arise from the cutaneous veins, and run from the umbilicus along the round ligament of the liver; these terminate as accessory portal veins in the liver.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37228") AnnotationAssertion( "FMA:71591") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) Annotation( ) "venae paraumbilicales") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "para-umbilical vein") AnnotationAssertion(Annotation( "FMA:71591") Annotation( ) "para-umbilical veins") AnnotationAssertion(Annotation( "FMA:71591") Annotation( ) "para-umbilical veins set") AnnotationAssertion( "paraumbilical vasculature") AnnotationAssertion(Annotation( ) "parumbilical vein") AnnotationAssertion(Annotation( ) Annotation( ) "parumbilical veins") AnnotationAssertion(Annotation( "FMA:71591") "vein of Sappey") AnnotationAssertion(Annotation( "FMA:71591") Annotation( ) "veins of Sappey") AnnotationAssertion( "UBERON:0035655") AnnotationAssertion(rdfs:label "paraumbilical vein") SubClassOf( ) # Class: (deep facial vein) AnnotationAssertion(Annotation( ) "The anterior facial vein receives a branch of considerable size, the deep facial vein, from the pterygoid venous plexus.") AnnotationAssertion( ) AnnotationAssertion( "FMA:50916") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035659") AnnotationAssertion(rdfs:label "deep facial vein") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (parotid vein) AnnotationAssertion( "FMA:50919") AnnotationAssertion(Annotation( "FMA:50919") "anterior parotid vein") AnnotationAssertion(Annotation( "FMA:50919") "parotid branch of facial vein") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035662") AnnotationAssertion(rdfs:label "parotid vein") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (anterior facial vein) AnnotationAssertion(Annotation( "NCITID__Anterior_Facial_Vein") Annotation( "ncithesaurus:Anterior_Facial_Vein") "A vein that represents a continuation of the angular vein and lies behind the facial artery.") AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37133") AnnotationAssertion( "MA:0002116") AnnotationAssertion( "NCIT:C52687") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035675") AnnotationAssertion(rdfs:label "anterior facial vein") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (secondary yolk sac cavity) AnnotationAssertion( "EHDAA2:0001821") AnnotationAssertion( "FMA:305890") AnnotationAssertion(Annotation( "FMA:305890") "cavity of definitive yolk sac") AnnotationAssertion(Annotation( "FMA:305890") "cavity of secondary yolk sac") AnnotationAssertion(Annotation( "FMA:305890") "definitive yolk sac cavity") AnnotationAssertion(Annotation( "EHDAA2:0001821") "secondary yolk sac cavity") AnnotationAssertion(Annotation( "FMA:305890") "secondary yolk sac cavity") AnnotationAssertion(Annotation( "FMA:305890") "secondary yolk sac space") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035676") AnnotationAssertion(rdfs:label "secondary yolk sac cavity") SubClassOf( ) SubClassOf( ) # Class: (primary yolk sac cavity) AnnotationAssertion( "EHDAA2:0001503") AnnotationAssertion( "EMAPA:36039") AnnotationAssertion( "FMA:305888") AnnotationAssertion(Annotation( "FMA:305888") "cavity of primary yolk sac") AnnotationAssertion(Annotation( "FMA:305888") "primary yolk sac cavity") AnnotationAssertion(Annotation( "FMA:305888") "primary yolk sac space") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035677") AnnotationAssertion(rdfs:label "primary yolk sac cavity") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (capillary plexus) AnnotationAssertion(Annotation( "UBERON:cjm"^^xsd:string) "A network of capillaries.") AnnotationAssertion(Annotation( "FMA"^^xsd:string) "in FMA this is part_of an intestinal villus") AnnotationAssertion( "FMA:45633") AnnotationAssertion(Annotation( "FMA:45633") "capillary network") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035753") AnnotationAssertion(rdfs:label "capillary plexus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pulmonary capillary plexus) AnnotationAssertion( "FMA:264928") AnnotationAssertion(Annotation( "FMA:264928") "capillary network of lung") AnnotationAssertion(Annotation( "FMA:264928") "pulmonary capillary network") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035754") AnnotationAssertion(rdfs:label "pulmonary capillary plexus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (systemic capillary plexus) AnnotationAssertion( "FMA:264934") AnnotationAssertion(Annotation( "FMA:264934") "systemic capillary network") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035755") AnnotationAssertion(rdfs:label "systemic capillary plexus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (capillary network of liver) AnnotationAssertion( "EHDAA2:0004525") AnnotationAssertion( "FMA:280884") AnnotationAssertion(Annotation( "FMA:280884") "capillary plexus of liver") AnnotationAssertion(Annotation( "FMA:280884") "hepatic capillary network") AnnotationAssertion( "hepatic capillary plexus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035756") AnnotationAssertion(rdfs:label "capillary network of liver") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (embryonic capillary plexus) AnnotationAssertion( "EHDAA2:0004540") AnnotationAssertion(Annotation( "EHDAA2:0004540") "embryonic venous capillary plexus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035757") AnnotationAssertion(rdfs:label "embryonic capillary plexus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (peritubular capillary plexus of kidney) AnnotationAssertion( ) AnnotationAssertion( "FMA:272218") AnnotationAssertion(Annotation( "FMA:272218") "peritubular capillary network of kidney") AnnotationAssertion(Annotation( "FMA:272218") "peritubular capillary plexus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035758") AnnotationAssertion(rdfs:label "peritubular capillary plexus of kidney") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (capillary network of kidney) AnnotationAssertion( "FMA:280922") AnnotationAssertion(Annotation( "FMA:280922") "capillary plexus of kidney") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035762") AnnotationAssertion(rdfs:label "capillary network of kidney") SubClassOf( ) SubClassOf( ) # Class: (cavity of cardiac chamber) AnnotationAssertion( "EHDAA2:0004181") AnnotationAssertion( "FMA:9464") AnnotationAssertion(Annotation( "FMA:9464") "cardiac chamber cavity") AnnotationAssertion(Annotation( "FMA:9464") "heart cavity") AnnotationAssertion(Annotation( "EHDAA2:0004181") "heart lumen") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035763") AnnotationAssertion(rdfs:label "cavity of cardiac chamber") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pulmonary lymph node) AnnotationAssertion( "FMA:5968") AnnotationAssertion(Annotation( "FMA:5968") "intrapulmonary lymph node") AnnotationAssertion(Annotation( "FMA:5968") "pulmonary node") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035764") AnnotationAssertion(rdfs:label "pulmonary lymph node") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (subsegmental lymph node) AnnotationAssertion(Annotation( "NCITID__Subsegmental_Lymph_Node") Annotation( "ncithesaurus:Subsegmental_Lymph_Node") "The lymph nodes around the subsegmental bronchi.") AnnotationAssertion( ) AnnotationAssertion( "FMA:276861") AnnotationAssertion( "NCIT:C28745") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035765") AnnotationAssertion(rdfs:label "subsegmental lymph node") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (median lobe of prostate) AnnotationAssertion(Annotation( "ncithesaurus:Middle_Lobe_of_the_Prostate") "The upper, smaller part of the prostate between the ejaculatory ducts and the urethra.") AnnotationAssertion( ) AnnotationAssertion( "FMA:45701") AnnotationAssertion( "NCIT:C13094") AnnotationAssertion(Annotation( "FMA:45701") "Albarran's gland") AnnotationAssertion(Annotation( "FMA:45701") "cranial part of prostate") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) Annotation( ) "lobus medius prostatae") AnnotationAssertion(Annotation( "FMA:45701") "middle lobe of prostate") AnnotationAssertion(Annotation( "FMA:45701") "pars proximalis (prostata)") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) Annotation( ) "pars proximalis prostatae") AnnotationAssertion(Annotation( "FMA:45701") "proximal part of prostate") AnnotationAssertion(Annotation( "FMA:45701") "proximal part of prostate gland") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035766") AnnotationAssertion(rdfs:label "median lobe of prostate") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (intrapulmonary bronchus) AnnotationAssertion( ) AnnotationAssertion( "FMA:223208") AnnotationAssertion( "NCIT:C12930") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035767") AnnotationAssertion(rdfs:label "intrapulmonary bronchus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (coccygeal nerve plexus) AnnotationAssertion(Annotation( ) "The coccygeal plexus is a plexus of nerves near the coccyx bone.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:45356") AnnotationAssertion(Annotation( "FMA:45356") "coccygeal plexus") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) Annotation( ) "plexus coccygeus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035768") AnnotationAssertion(rdfs:label "coccygeal nerve plexus") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (mesenteric ganglion) AnnotationAssertion( ) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035769") AnnotationAssertion(rdfs:label "mesenteric ganglion") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (inferior mesenteric nerve plexus) AnnotationAssertion(Annotation( ) "The inferior mesenteric plexus is derived chiefly from the aortic plexus. It surrounds the inferior mesenteric artery, and divides into a number of secondary plexuses, which are distributed to all the parts supplied by the artery, viz. , the left colic and sigmoid plexuses, which supply the descending and sigmoid parts of the colon; and the superior hemorrhoidal plexus, which supplies the rectum and joins in the pelvis with branches from the pelvic plexuses.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:6641") AnnotationAssertion(Annotation( "FMA:6641") "inferior mesenteric plexus") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) Annotation( ) "plexus mesentericus inferior") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) Annotation( ) "plexus nervosus mesentericus inferior") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035770") AnnotationAssertion(rdfs:label "inferior mesenteric nerve plexus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (mesenteric plexus) AnnotationAssertion( ) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035771") AnnotationAssertion(rdfs:label "mesenteric plexus") SubClassOf( ) # Class: (aortic plexus) AnnotationAssertion( "FMA:80133") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035772") AnnotationAssertion(rdfs:label "aortic plexus") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (abdominal nerve plexus) AnnotationAssertion(Annotation( ) "The abdominal aortic plexus (aortic plexus) is formed by branches derived, on either side, from the celiac plexus and ganglia, and receives filaments from some of the lumbar ganglia. It is situated upon the sides and front of the aorta, between the origins of the superior and inferior mesenteric arteries. From this plexus arise part of the spermatic, the inferior mesenteric, and the hypogastric plexuses; it also distributes filaments to the inferior vena cava.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:6640") AnnotationAssertion(Annotation( "FMA:6640") "abdominal aortic nerve plexus") AnnotationAssertion(Annotation( "FMA:6640") "abdominal aortic plexus") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) Annotation( ) "plexus aorticus abdominalis") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) Annotation( ) "plexus nervosus aorticus abdominalis") AnnotationAssertion(Annotation( "FMA:6640") "preaortic nerve plexus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035773") AnnotationAssertion(rdfs:label "abdominal nerve plexus") SubClassOf( ) # Class: (thoracic aortic plexus) AnnotationAssertion(Annotation( ) "The thoracic aortic plexus is a sympathetic plexus in the region of the thoracic aorta.") AnnotationAssertion( ) AnnotationAssertion( "FMA:77574") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) Annotation( ) "plexus aorticus thoracicus") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) Annotation( ) "plexus nervosus aorticus thoracicus") AnnotationAssertion(Annotation( "FMA:77574") "thoracic aortic nerve plexus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035774") AnnotationAssertion(rdfs:label "thoracic aortic plexus") SubClassOf( ) # Class: (submandibular region) AnnotationAssertion(Annotation( ) "The region between the mandible and the hyoid bone that contains the submandibular and sublingual glands, suprahyoid muscles, submandibular ganglion, and lingual artery.") AnnotationAssertion(Annotation( "FMA"^^xsd:string) "we place submandibular triangle from FMA here, although this may be a narrower region with more precise boundaries") AnnotationAssertion( ) AnnotationAssertion( "FMA:57779") AnnotationAssertion(Annotation( ) "digastric triangle") AnnotationAssertion(Annotation( "FMA:57779") "digastric triangle") AnnotationAssertion(Annotation( "FMA:57779") "submandibular triangle") AnnotationAssertion(Annotation( ) "submaxillary triangle") AnnotationAssertion(Annotation( "FMA:57779") "submaxillary triangle") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) Annotation( ) "trigonum submandibulare") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035775") AnnotationAssertion(rdfs:label "submandibular region") AnnotationAssertion( "https://upload.wikimedia.org/wikipedia/commons/thumb/3/36/Musculi_coli_base%2C_my_edits_for_tringles%2C_labeled_triangles%2C_Submandib.svg/500px-Musculi_coli_base%2C_my_edits_for_tringles%2C_labeled_triangles%2C_Submandib.svg.png"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (accessory ciliary ganglion) AnnotationAssertion(Annotation( ) "A parasympathetic ganglion located on the short ciliary nerve differentiated from the main ciliary ganglion by virtue of the fact that it had no root derived directly from the inferior trunk of the oculomotor nerve and it never attaches to this nerve.") AnnotationAssertion( "tested for and found to be present in pig, sika deer, domestic sheep, horse, cat, fox, racoon dog, marten, rat, rabbit, crab-eating macaque, japanese macaque and human[PMID:2802184]") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035776") AnnotationAssertion(rdfs:label "accessory ciliary ganglion") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (ganglion of ciliary nerve) AnnotationAssertion(Annotation( "UBERON:cjm"^^xsd:string) "Any parasympathetic ganglion that extends fibers into the short ciliary nerve. Includes both the main and acccessory ciliary ganglia.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035783") AnnotationAssertion(rdfs:label "ganglion of ciliary nerve") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (seminal clot) AnnotationAssertion(Annotation( ) Annotation( ) "A portion of semen in a coagulated state.") AnnotationAssertion(Annotation( ) "seminal coagulum") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035784") AnnotationAssertion(rdfs:label "seminal clot") SubClassOf( ) # Class: (layer of CA1 field) AnnotationAssertion( "FMA:277844") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035786") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "layer of CA1 field") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (layer of CA2 field) AnnotationAssertion( "FMA:277846") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035787") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "layer of CA2 field") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (layer of CA3 field) AnnotationAssertion( "FMA:277848") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035788") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "layer of CA3 field") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (alveus of CA2 field) AnnotationAssertion(Annotation( "UBERON:cjm"^^xsd:string) "Part of alveus lying within hippocampal sector CA2.") AnnotationAssertion( "FMA:277876") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035802") AnnotationAssertion(rdfs:label "alveus of CA2 field") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (extrapyramidal tract system) AnnotationAssertion(Annotation( ) "A neural network located in the brain that is part of the motor system involved in the coordination of movement that is distinct from the pyramidal tract.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "MBA:1000") AnnotationAssertion( "MESH:A08.186.854.253") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "MBA:1000") Annotation( ) "eps") AnnotationAssertion(Annotation( ) "extra-pyramidal tract") AnnotationAssertion(Annotation( ) "extrapyramidal fibre") AnnotationAssertion(Annotation( ) "extrapyramidal motor system") AnnotationAssertion(Annotation( "NeuroNames:2070") "extrapyramidal pathway") AnnotationAssertion(Annotation( "NeuroNames:2070") "extrapyramidal system") AnnotationAssertion(Annotation( ) "extrapyramidal tracts") AnnotationAssertion(Annotation( ) "extrapyramindal system") AnnotationAssertion( "UBERON:0035803") AnnotationAssertion(rdfs:label "extrapyramidal tract system") SubClassOf(Annotation( "MBA") ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (future mouth) AnnotationAssertion(Annotation( "MP:0003119") "The primordial mouth region of the developing head.") AnnotationAssertion( "FMA:293105") AnnotationAssertion(Annotation( "FMA:293105") "primitive mouth") AnnotationAssertion( "primordial mouth") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035804") AnnotationAssertion(rdfs:label "future mouth") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (muscle layer of sigmoid colon) AnnotationAssertion(Annotation( ) "A muscle layer that is part of the sigmoid colon.") AnnotationAssertion( "FMA:15028") AnnotationAssertion(Annotation( "FMA:15028") "muscularis externa of sigmoid colon") AnnotationAssertion( "muscularis propria of sigmoid colon") AnnotationAssertion( "sigmoid colon muscularis propria") AnnotationAssertion( "uberon") AnnotationAssertion( "sigmoideum muscularis") AnnotationAssertion( "tunica muscularis colon sigmoideum") AnnotationAssertion( "UBERON:0035805") AnnotationAssertion(rdfs:label "muscle layer of sigmoid colon") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (Hensen stripe) AnnotationAssertion(Annotation( "MGI:anna"^^xsd:string) "The dark, nonstriated, V-shaped band (ridge) found on the underside of the tectorial membrane in the basal region of the cochlea, from which fine gelatinous trabeculae extend to fix the TM to the border cells, i.e. cells directly adjacent to the inner phalangeal cells.") AnnotationAssertion( "Hensen's stripe is continuous with a more external homogeneous basal layer, from which a marginal band of an amorphous substance originates; the marginal net extends from the marginal band and attaches the lateral border of the TM to Hensen's cells of the organ of Corti. Hensen's stripe and the homogeneous basal layers display interruptions through which the fibrillar structure of the TM is visible") AnnotationAssertion(Annotation( "MGI:anna"^^xsd:string) "Hensen's stripe") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035806") AnnotationAssertion(rdfs:label "Hensen stripe") SubClassOf( ) SubClassOf(Annotation( "cjm"^^xsd:string) ) SubClassOf( ) SubClassOf(Annotation( "cjm"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (serous cavity) AnnotationAssertion( ) AnnotationAssertion( "FMA:12241") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035809") AnnotationAssertion(rdfs:label "serous cavity") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pericardial fat) AnnotationAssertion(Annotation( ) "The sum of epicardial and paracardial fat deposits.") AnnotationAssertion( ) AnnotationAssertion( "ZFA:0005765") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035814") AnnotationAssertion(rdfs:label "pericardial fat") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (paracardial fat) AnnotationAssertion(Annotation( ) "Fat deposits in the mediastinum outside the parietal pericardium .") AnnotationAssertion(Annotation( ) "intrathoracic fat") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035815") AnnotationAssertion(rdfs:label "paracardial fat") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (visceral fat) AnnotationAssertion(Annotation( "UBERON:cjm"^^xsd:string) "Any fat deposit surrounding a visceral organ.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035818") AnnotationAssertion(rdfs:label "visceral fat") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (abdominopelvic cavity) AnnotationAssertion(Annotation( "UBERON:cjm"^^xsd:string) "The part of the ventral body cavity that is within the abdominal segment of the trunk, which encompasses the abdomen proper plus pelvic cavity.") AnnotationAssertion( ) AnnotationAssertion( "FMA:12267") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) Annotation( ) "cavitas abdominis et pelvis") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035819") AnnotationAssertion(rdfs:label "abdominopelvic cavity") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (peritoneal sac) AnnotationAssertion(Annotation( ) "A serous sac that is the aggregate of the peritoneum and the peritoneal cavity, located in the abdominal cavity.") AnnotationAssertion( "EMAPA:16137") AnnotationAssertion( "FMA:9908") AnnotationAssertion( "MA:0000054") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "EMAPA:16137") "peritoneal component") AnnotationAssertion( "UBERON:0035820") AnnotationAssertion(rdfs:label "peritoneal sac") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (left adrenal gland cortex) AnnotationAssertion(Annotation( ) "The thick outer layer of the adrenal gland that is in the left side of the abdomen.") AnnotationAssertion( "FMA:69089") AnnotationAssertion(Annotation( "FMA:69089") "cortex of left adrenal gland") AnnotationAssertion(Annotation( "FMA:69089") "cortex of left suprarenal gland") AnnotationAssertion(Annotation( "FMA:69089") "left adrenal cortex") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035825") AnnotationAssertion(rdfs:label "left adrenal gland cortex") SubClassOf(Annotation( "true"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (left adrenal gland medulla) AnnotationAssertion(Annotation( ) "The adrenal gland medulla that is in the left side of the abdomen.") AnnotationAssertion( "FMA:69092") AnnotationAssertion(Annotation( "FMA:69092") "left adrenal medulla") AnnotationAssertion(Annotation( "FMA:69092") "medulla of left adrenal gland") AnnotationAssertion(Annotation( "FMA:69092") "medulla of left suprarenal gland") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035826") AnnotationAssertion(rdfs:label "left adrenal gland medulla") SubClassOf(Annotation( "true"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (right adrenal gland cortex) AnnotationAssertion(Annotation( ) "The thick outer layer of the adrenal gland that is in the right side of the abdomen.") AnnotationAssertion( "FMA:69088") AnnotationAssertion(Annotation( "FMA:69088") "cortex of right adrenal gland") AnnotationAssertion(Annotation( "FMA:69088") "cortex of right suprarenal gland") AnnotationAssertion(Annotation( "FMA:69088") "right adrenal cortex") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035827") AnnotationAssertion(rdfs:label "right adrenal gland cortex") SubClassOf(Annotation( "true"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (right adrenal gland medulla) AnnotationAssertion(Annotation( ) "The adrenal gland medulla that is in the right side of the abdomen.") AnnotationAssertion( "FMA:69091") AnnotationAssertion(Annotation( "FMA:69091") "medulla of right adrenal gland") AnnotationAssertion(Annotation( "FMA:69091") "medulla of right suprarenal gland") AnnotationAssertion(Annotation( "FMA:69091") "right adrenal medulla") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035828") AnnotationAssertion(rdfs:label "right adrenal gland medulla") SubClassOf(Annotation( "true"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (right gastroepiploic artery) AnnotationAssertion(Annotation( ) "Artery that runs from right to left along the greater curvature of the stomach, between the layers of the greater omentum, anastomosing with the left gastroepiploic branch of the splenic artery.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:14781") AnnotationAssertion(Annotation( ) Annotation( ) "arteria gastro-omentalis dextra") AnnotationAssertion(Annotation( ) Annotation( ) "arteria gastroepiploica dextra") AnnotationAssertion(Annotation( ) Annotation( ) "arteria gastroomentalis dextra") AnnotationAssertion(Annotation( "FMA:14781") "right gastro-epiploic artery") AnnotationAssertion(Annotation( "FMA:14781") "right gastro-omental artery") AnnotationAssertion(Annotation( "FMA:14781") "right gastroomental artery") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "right gastroepiploic") AnnotationAssertion(Annotation( ) "right gastroepiploic artery") AnnotationAssertion( "UBERON:0035829") AnnotationAssertion(rdfs:label "right gastroepiploic artery") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (left gastroepiploic artery) AnnotationAssertion(Annotation( ) "Artery that runs from left to right along the greater curvature of the stomach, between the layers of the greater omentum, and anastomoses with the right gastroepiploic.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:14796") AnnotationAssertion(Annotation( ) Annotation( ) "arteria gastro-omentalis sinistra") AnnotationAssertion(Annotation( ) Annotation( ) "arteria gastroepiploica sinistra") AnnotationAssertion(Annotation( ) Annotation( ) "arteria gastroomentalis sinistra") AnnotationAssertion(Annotation( "FMA:14796") "left gastro-epiploic artery") AnnotationAssertion(Annotation( "FMA:14796") "left gastro-omental artery") AnnotationAssertion(Annotation( "FMA:14796") "left gastroomental artery") AnnotationAssertion(Annotation( "FMA:14796") "left inferior gastric artery") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "left gastroepiploic artery") AnnotationAssertion(Annotation( ) "left gastroepiploic branch") AnnotationAssertion( "UBERON:0035830") AnnotationAssertion(rdfs:label "left gastroepiploic artery") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (costal diaphragm) AnnotationAssertion(Annotation( ) "The domain of the diaphragm that is a thin domed sheet of muscle composed of a radial array of myofibers extending laterally from the ribs and medially to a central tendon.") AnnotationAssertion( ) AnnotationAssertion( "FMA:58277") AnnotationAssertion(Annotation( "FMA:58277") "costal part of diaphragm") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) Annotation( ) "pars costalis diaphragmatis") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035831") AnnotationAssertion(rdfs:label "costal diaphragm") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lower esophagus muscularis layer) AnnotationAssertion( "lower esophagus muscularis propria") AnnotationAssertion( "muscle coat of lower esophagus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035833") AnnotationAssertion(rdfs:label "lower esophagus muscularis layer") AnnotationAssertion(rdfs:seeAlso ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lower esophagus mucosa) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035834") AnnotationAssertion(rdfs:label "lower esophagus mucosa") AnnotationAssertion(rdfs:seeAlso ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (apical region of left ventricle) AnnotationAssertion(Annotation( ) Annotation( "BGEE:Ann") "Region around the apex of the cardiac left ventricle located at the bottom of the left ventricle inferior to both the mitral and aortic valve.") AnnotationAssertion( ) AnnotationAssertion( "FMA:225374") AnnotationAssertion(Annotation( "FMA:225374") "apical zone of left ventricle") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035835") AnnotationAssertion(rdfs:label "apical region of left ventricle") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (apical region of right ventricle) AnnotationAssertion( ) AnnotationAssertion( "FMA:230605") AnnotationAssertion(Annotation( "FMA:230605") "apical zone of right ventricle") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035836") AnnotationAssertion(rdfs:label "apical region of right ventricle") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (apical region of heart ventricle) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37425") AnnotationAssertion( "MA:0003017") AnnotationAssertion( "apical region of cardiac ventricle") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "MA:0003017") "apex of cardiac ventricle") AnnotationAssertion(Annotation( "MA:0003017") "apex of heart ventricle") AnnotationAssertion( "UBERON:0035837") AnnotationAssertion(rdfs:label "apical region of heart ventricle") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (esophagogastric junction mucosa) AnnotationAssertion(Annotation( ) "Mucosa from the lowest portion of the esophagus, just proximal to the stomach.") AnnotationAssertion( "EMAPA:27039") AnnotationAssertion(Annotation( "EMAPA:27039") "gastro-esophageal junction mucosa") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035838") AnnotationAssertion(rdfs:label "esophagogastric junction mucosa") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (esophagogastric junction submucosa) AnnotationAssertion(Annotation( ) "Submucosa from the lowest portion of the esophagus, just proximal to the stomach.") AnnotationAssertion( "EMAPA:27041") AnnotationAssertion(Annotation( "EMAPA:27041") "gastro-esophageal junction submucosa") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035839") AnnotationAssertion(rdfs:label "esophagogastric junction submucosa") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (esophagogastric junction muscularis mucosa) AnnotationAssertion(Annotation( ) "Muscularis mucosa from the lowest portion of the esophagus, just proximal to the stomach.") AnnotationAssertion( "EMAPA:27051") AnnotationAssertion(Annotation( "EMAPA:27051") "gastro-esophageal junction muscularis mucosa") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035840") AnnotationAssertion(rdfs:label "esophagogastric junction muscularis mucosa") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (esophagogastric junction muscularis propria) AnnotationAssertion(Annotation( ) "Muscularis propria from the lowest portion of the esophagus, just proximal to the stomach.") AnnotationAssertion( "gastro-esophageal junction muscularis propria") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035841") AnnotationAssertion(rdfs:label "esophagogastric junction muscularis propria") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (extensor digitorum brevis manus) AnnotationAssertion(Annotation( "ISBN:9781439883365") "An accessory extensor muscle of the hand found in some humans and other animals.") AnnotationAssertion( "extensor brevis digitorum manus") AnnotationAssertion( "extensor digitorum brevis manus muscle") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035842") AnnotationAssertion(rdfs:label "extensor digitorum brevis manus") SubClassOf( ) SubClassOf( ) # Class: (lower esophagus submucosa) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035843") AnnotationAssertion(rdfs:label "lower esophagus submucosa") AnnotationAssertion(rdfs:seeAlso ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lower esophagus muscularis mucosa) AnnotationAssertion( "lamina muscularis of lower esophagus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035844") AnnotationAssertion(rdfs:label "lower esophagus muscularis mucosa") AnnotationAssertion(rdfs:seeAlso ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (enthesis) AnnotationAssertion(Annotation( ) Annotation( ) Annotation( ) Annotation( ) Annotation( "MGI:cs") "The connective tissue between tendon and bone insertion sites, which acts to transmit tensile load from soft tissues to bone. They may be of the dense fibrous connective tissue or fibrocartilage type; fibrous entheses attach directly to bone or periosteum primarily via fibrous tissue, and fibrocartilaginous entheses attach to bone through a transitional layer of fibrocartilage from the fibrous tendon tissue the sites where tendons or ligaments insert into the bone. Recurring stress or inflammatory autoimmune disease can cause inflammation or occasionally fibrosis and calcification of the enthesis.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035845") AnnotationAssertion(rdfs:label "enthesis") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (fibrous enthesis) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035846") AnnotationAssertion(rdfs:comment "fibrous entheses attach directly to bone or periosteum primarily via fibrous tissue") AnnotationAssertion(rdfs:label "fibrous enthesis") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (fibrocartilage enthesis) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035847") AnnotationAssertion(rdfs:comment "fibrocartilaginous entheses attach to bone through a transitional layer of fibrocartilage from the fibrous tendon tissue the sites where tendons or ligaments insert into the bone") AnnotationAssertion(rdfs:label "fibrocartilage enthesis") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (infraorbital margin) AnnotationAssertion(Annotation( ) "The infraorbital margin is the lower margin of the orbita.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:53177") AnnotationAssertion( "inferior orbital rim") AnnotationAssertion(Annotation( ) Annotation( "FMA:53177") "infra-orbital margin") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) Annotation( ) "margo infraorbitalis") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035848") AnnotationAssertion(rdfs:label "infraorbital margin") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (orbital margin) AnnotationAssertion(Annotation( ) "The mostly sharp edge of the orbital opening that is the peripheral border of the base of the pyramidal orbit.") AnnotationAssertion( ) AnnotationAssertion( "FMA:53176") AnnotationAssertion(Annotation( ) "margin of orbit") AnnotationAssertion(Annotation( ) Annotation( "FMA:TA"^^xsd:string) Annotation( ) "margo orbitalis") AnnotationAssertion(Annotation( ) "orbital rim") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035849") AnnotationAssertion(rdfs:label "orbital margin") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (subchondral region of epiphysis) AnnotationAssertion(Annotation( ) Annotation( ) Annotation( ) Annotation( "MGI:csmith"^^xsd:string) "The bone region of the epiphysis that provides underlying mechanical and physiological support for the cartilage of joint articular surfaces.") AnnotationAssertion( "subchondral bone") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035878") AnnotationAssertion(rdfs:label "subchondral region of epiphysis") SubClassOf( ) SubClassOf(Annotation( "MGI:csmith") ObjectSomeValuesFrom( )) # Class: (frontomaxillary suture) AnnotationAssertion(Annotation( ) "A suture between the frontal bone and the frontal process of the maxilla.") AnnotationAssertion( "FMA:52950") AnnotationAssertion(Annotation( "FMA:52950") "frontomaxillary suture of skull") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) Annotation( ) "sutura frontomaxillaris") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035879") AnnotationAssertion(rdfs:label "frontomaxillary suture") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (zygomaticomaxillary suture) AnnotationAssertion(Annotation( ) "A suture between the zygomatic bone and the zygomatic process of the maxilla.") AnnotationAssertion( "FMA:52953") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) Annotation( ) "sutura infraorbitalis") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) Annotation( ) "sutura zygomaticomaxillaris") AnnotationAssertion(Annotation( "FMA:52953") "zygomaticomaxillary suture of skull") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035880") AnnotationAssertion(rdfs:label "zygomaticomaxillary suture") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (ethmoidomaxillary suture) AnnotationAssertion(Annotation( ) "A suture between the orbital surface of the body of the maxilla with the orbital plate of the ethmoid bone.") AnnotationAssertion( "FMA:52954") AnnotationAssertion(Annotation( "FMA:52954") "ethmoidomaxillary suture of skull") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) Annotation( ) "sutura ethmoidomaxillaris") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035881") AnnotationAssertion(rdfs:label "ethmoidomaxillary suture") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (sphenomaxillary suture) AnnotationAssertion(Annotation( ) "An inconstant suture between the pterygoid process of the sphenoid bone and the body of the maxilla.") AnnotationAssertion( "FMA:52957") AnnotationAssertion(Annotation( "FMA:52957") "sphenomaxillary suture of skull") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) Annotation( ) "sutura sphenomaxillaris") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035882") AnnotationAssertion(rdfs:label "sphenomaxillary suture") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lacrimomaxillary suture) AnnotationAssertion(Annotation( ) "A suture between the lacrimal bone and the maxilla.") AnnotationAssertion( "FMA:52961") AnnotationAssertion(Annotation( "FMA:52961") "lacrimomaxillary suture of skull") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) Annotation( ) "sutura lacrimomaxillaris") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035883") AnnotationAssertion(rdfs:label "lacrimomaxillary suture") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (maxillary-premaxillary suture) AnnotationAssertion(Annotation( ) Annotation( ) Annotation( "MGI:csmith"^^xsd:string) "A suture between the maxilla and premaxilla.") AnnotationAssertion( "present in mouse [PMID:21538817]") AnnotationAssertion( "transient in humans") AnnotationAssertion(Annotation( "UBERON:cjm"^^xsd:string) "maxillary-premaxillary incisive suture") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "MGI:csmith"^^xsd:string) "incisive suture") AnnotationAssertion(Annotation( "MGI:csmith"^^xsd:string) "premaxillary suture") AnnotationAssertion( "UBERON:0035884") AnnotationAssertion(rdfs:label "maxillary-premaxillary suture") SubClassOf( ) SubClassOf( ) # Class: (dorsal auditory area) AnnotationAssertion( "MBA:1011") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "MBA:1011") Annotation( ) "AUDd") AnnotationAssertion( "UBERON:0035885") AnnotationAssertion(rdfs:label "dorsal auditory area") SubClassOf(Annotation( "MBA") ) SubClassOf( ) SubClassOf(Annotation( "MBA") ObjectSomeValuesFrom( )) # Class: (posterior parietal association areas) AnnotationAssertion( "MBA:22") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "MBA:22") Annotation( ) "PTLp") AnnotationAssertion( "UBERON:0035886") AnnotationAssertion(rdfs:label "posterior parietal association areas") SubClassOf(Annotation( "MBA") ) SubClassOf( ) SubClassOf(Annotation( "MBA") ObjectSomeValuesFrom( )) # Class: (postrhinal area) AnnotationAssertion( "MBA:312782628") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "MBA:312782628") Annotation( ) "VISpor") AnnotationAssertion( "UBERON:0035890") AnnotationAssertion(rdfs:label "postrhinal area") SubClassOf(Annotation( "MBA") ) SubClassOf( ) SubClassOf(Annotation( "MBA") ObjectSomeValuesFrom( )) # Class: (primary visual area, layer 6a) AnnotationAssertion( "MBA:33") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "MBA:33") Annotation( ) "VISp6a") AnnotationAssertion( "UBERON:0035892") AnnotationAssertion(rdfs:label "primary visual area, layer 6a") SubClassOf(Annotation( "MBA") ) SubClassOf( ) SubClassOf(Annotation( "MBA") ObjectSomeValuesFrom( )) # Class: (anteromedial visual area) AnnotationAssertion( "MBA:394") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "MBA:394") Annotation( ) "VISam") AnnotationAssertion( "UBERON:0035893") AnnotationAssertion(rdfs:label "anteromedial visual area") SubClassOf(Annotation( "MBA") ) SubClassOf( ) SubClassOf(Annotation( "MBA") ObjectSomeValuesFrom( )) # Class: (anterolateral visual area) AnnotationAssertion( "MBA:402") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "MBA:402") Annotation( ) "VISal") AnnotationAssertion( "UBERON:0035894") AnnotationAssertion(rdfs:label "anterolateral visual area") SubClassOf(Annotation( "MBA") ) SubClassOf( ) SubClassOf(Annotation( "MBA") ObjectSomeValuesFrom( )) # Class: (lateral visual area) AnnotationAssertion( "MBA:409") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "MBA:409") Annotation( ) "VISl") AnnotationAssertion( "UBERON:0035895") AnnotationAssertion(rdfs:label "lateral visual area") SubClassOf(Annotation( "MBA") ) SubClassOf( ) SubClassOf(Annotation( "MBA") ObjectSomeValuesFrom( )) # Class: (posterolateral visual area) AnnotationAssertion( "MBA:425") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "MBA:425") Annotation( ) "VISpl") AnnotationAssertion( "UBERON:0035897") AnnotationAssertion(rdfs:label "posterolateral visual area") SubClassOf(Annotation( "MBA") ) SubClassOf( ) SubClassOf(Annotation( "MBA") ObjectSomeValuesFrom( )) # Class: (posteromedial visual area) AnnotationAssertion( "MBA:533") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "MBA:533") Annotation( ) "VISpm") AnnotationAssertion( "UBERON:0035900") AnnotationAssertion(rdfs:label "posteromedial visual area") SubClassOf(Annotation( "MBA") ) SubClassOf( ) SubClassOf(Annotation( "MBA") ObjectSomeValuesFrom( )) # Class: (primary visual area, layer 4) AnnotationAssertion( "MBA:721") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "MBA:721") Annotation( ) "VISp4") AnnotationAssertion( "UBERON:0035904") AnnotationAssertion(rdfs:label "primary visual area, layer 4") SubClassOf(Annotation( "MBA") ) SubClassOf( ) SubClassOf(Annotation( "MBA") ObjectSomeValuesFrom( )) # Class: (primary visual area, layer 5) AnnotationAssertion( "MBA:778") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "MBA:778") Annotation( ) "VISp5") AnnotationAssertion( "UBERON:0035906") AnnotationAssertion(rdfs:label "primary visual area, layer 5") SubClassOf(Annotation( "MBA") ) SubClassOf( ) SubClassOf(Annotation( "MBA") ObjectSomeValuesFrom( )) # Class: (primary visual area, layer 2/3) AnnotationAssertion( "MBA:821") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "MBA:821") Annotation( ) "VISp2/3") AnnotationAssertion( "UBERON:0035907") AnnotationAssertion(rdfs:label "primary visual area, layer 2/3") SubClassOf(Annotation( "MBA") ) SubClassOf( ) SubClassOf(Annotation( "MBA") ObjectSomeValuesFrom( )) # Class: (anterolateral visual area, layer 5) AnnotationAssertion( "MBA:233") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "MBA:233") Annotation( ) "VISal5") AnnotationAssertion( "UBERON:0035908") AnnotationAssertion(rdfs:label "anterolateral visual area, layer 5") SubClassOf(Annotation( "MBA") ) SubClassOf( ) SubClassOf(Annotation( "MBA") ObjectSomeValuesFrom( )) # Class: (posteromedial visual area, layer 6a) AnnotationAssertion( "MBA:257") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "MBA:257") Annotation( ) "VISpm6a") AnnotationAssertion( "UBERON:0035909") AnnotationAssertion(rdfs:label "posteromedial visual area, layer 6a") SubClassOf(Annotation( "MBA") ) SubClassOf( ) SubClassOf(Annotation( "MBA") ObjectSomeValuesFrom( )) # Class: (postrhinal area, layer 4) AnnotationAssertion( "MBA:312782640") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "MBA:312782640") Annotation( ) "VISpor4") AnnotationAssertion( "UBERON:0035911") AnnotationAssertion(rdfs:label "postrhinal area, layer 4") SubClassOf(Annotation( "MBA") ) SubClassOf( ) SubClassOf(Annotation( "MBA") ObjectSomeValuesFrom( )) # Class: (rostrolateral visual area) AnnotationAssertion( "MBA:417") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "MBA:417") Annotation( ) "VISrl") AnnotationAssertion( "UBERON:0035912") AnnotationAssertion(rdfs:label "rostrolateral visual area") SubClassOf(Annotation( "MBA") ) SubClassOf( ) SubClassOf(Annotation( "MBA") ObjectSomeValuesFrom( )) # Class: (anteromedial visual area, layer 5) AnnotationAssertion( "MBA:433") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "MBA:433") Annotation( ) "VISam5") AnnotationAssertion( "UBERON:0035913") AnnotationAssertion(rdfs:label "anteromedial visual area, layer 5") SubClassOf(Annotation( "MBA") ) SubClassOf( ) SubClassOf(Annotation( "MBA") ObjectSomeValuesFrom( )) # Class: (posteromedial visual area, layer 4) AnnotationAssertion( "MBA:501") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "MBA:501") Annotation( ) "VISpm4") AnnotationAssertion( "UBERON:0035914") AnnotationAssertion(rdfs:label "posteromedial visual area, layer 4") SubClassOf(Annotation( "MBA") ) SubClassOf( ) SubClassOf(Annotation( "MBA") ObjectSomeValuesFrom( )) # Class: (lateral visual area, layer 4) AnnotationAssertion( "MBA:573") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "MBA:573") Annotation( ) "VISl4") AnnotationAssertion( "UBERON:0035915") AnnotationAssertion(rdfs:label "lateral visual area, layer 4") SubClassOf(Annotation( "MBA") ) SubClassOf( ) SubClassOf(Annotation( "MBA") ObjectSomeValuesFrom( )) # Class: (lateral visual area, layer 5) AnnotationAssertion( "MBA:613") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "MBA:613") Annotation( ) "VISl5") AnnotationAssertion( "UBERON:0035916") AnnotationAssertion(rdfs:label "lateral visual area, layer 5") SubClassOf(Annotation( "MBA") ) SubClassOf( ) SubClassOf(Annotation( "MBA") ObjectSomeValuesFrom( )) # Class: (dorsal auditory area, layer 4) AnnotationAssertion( "MBA:678") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "MBA:678") Annotation( ) "AUDd4") AnnotationAssertion( "UBERON:0035917") AnnotationAssertion(rdfs:label "dorsal auditory area, layer 4") SubClassOf(Annotation( "MBA") ) SubClassOf( ) SubClassOf(Annotation( "MBA") ObjectSomeValuesFrom( )) # Class: (lateral visual area, layer 6a) AnnotationAssertion( "MBA:74") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "MBA:74") Annotation( ) "VISl6a") AnnotationAssertion( "UBERON:0035918") AnnotationAssertion(rdfs:label "lateral visual area, layer 6a") SubClassOf(Annotation( "MBA") ) SubClassOf( ) SubClassOf(Annotation( "MBA") ObjectSomeValuesFrom( )) # Class: (posterolateral visual area, layer 4) AnnotationAssertion( "MBA:869") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "MBA:869") Annotation( ) "VISpl4") AnnotationAssertion( "UBERON:0035919") AnnotationAssertion(rdfs:label "posterolateral visual area, layer 4") SubClassOf(Annotation( "MBA") ) SubClassOf( ) SubClassOf(Annotation( "MBA") ObjectSomeValuesFrom( )) # Class: (rostrolateral area, layer 5) AnnotationAssertion( "MBA:312782616") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "MBA:312782616") Annotation( ) "VISrl5") AnnotationAssertion( "UBERON:0035920") AnnotationAssertion(rdfs:label "rostrolateral area, layer 5") SubClassOf(Annotation( "MBA") ) SubClassOf( ) SubClassOf(Annotation( "MBA") ObjectSomeValuesFrom( )) # Class: (intraculminate fissure of cerebellum) AnnotationAssertion(Annotation( ) Annotation( "MP:000999") Annotation( "UBERON:cjm"^^xsd:string) "A fissure that divides the culmen lobule (lobules IV and V).") AnnotationAssertion( ) AnnotationAssertion( "The culmen lobule (lobules IV/V) is a single structure in humans, but it is divided by the intraculminate fissure in many rodents. In some mouse strains such as SLJ/J, the intraculminate fissure is absent, in some strains such as DBA/2J it is present, and other strains (C57BL/10J and BALB/cJ) exhibit considerable variablility (PMID: 1953602).[MP]") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "DHBA:266441729") AnnotationAssertion( "FMA:83737") AnnotationAssertion( "HBA:9409") AnnotationAssertion( "RadLex:RID6872") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) Annotation( ) "fissura intraculminalis") AnnotationAssertion(Annotation( "FMA:83737") "intraculminate fissure") AnnotationAssertion(Annotation( "HBA:9409") "intraculminate fissure") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "DHBA:266441729") Annotation( ) "ICF") AnnotationAssertion( "UBERON:0035922") AnnotationAssertion(rdfs:label "intraculminate fissure of cerebellum") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (radiation of corpus callosum) AnnotationAssertion(Annotation( ) "The spreading out of the fibers of the corpus callosum in the centrum semiovale of each cerebral hemisphere.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "DHBA:12026") AnnotationAssertion( "FMA:77693") AnnotationAssertion( "HBA:265504962") AnnotationAssertion(Annotation( "FMA:77693") "corpus callosum radiation") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) Annotation( ) "radiatio corporis callosi") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "DHBA:12026") Annotation( ) "CCRD") AnnotationAssertion(Annotation( "NeuroNames:1336") Annotation( ) "radiatio corporis callosi") AnnotationAssertion(Annotation( "HBA:265504962") Annotation( ) "radiations of corpus callosum") AnnotationAssertion(Annotation( "NeuroNames:1336") Annotation( ) "radiations of the corpus callosum") AnnotationAssertion( "UBERON:0035924") AnnotationAssertion(rdfs:label "radiation of corpus callosum") SubClassOf(Annotation( "cjm"^^xsd:string) ) SubClassOf( ) SubClassOf(Annotation( "HBA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (central sulcus of insula) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "DHBA:13227") AnnotationAssertion( "FMA:83779") AnnotationAssertion( "HBA:9399") AnnotationAssertion(Annotation( "FMA:83779") "central fissure of insula") AnnotationAssertion(Annotation( "FMA:83779") "central fissure of island") AnnotationAssertion(Annotation( "FMA:83779") "central insula sulcus") AnnotationAssertion(Annotation( "FMA:83779") "central insular sulcus") AnnotationAssertion(Annotation( "FMA:83779") "central sulcus of insula") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) Annotation( ) "fissura centralis insulae") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) Annotation( ) "sulcus centralis insulae") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "HBA:9399") Annotation( ) "CIS") AnnotationAssertion(Annotation( "DHBA:13227") Annotation( ) "CSIN") AnnotationAssertion(Annotation( "NeuroNames:112") "central fissure of insula") AnnotationAssertion(Annotation( "NeuroNames:112") "central fissure of island") AnnotationAssertion(Annotation( "NeuroNames:112") "central insula sulcus") AnnotationAssertion(Annotation( "NeuroNames:112") "central insular sulcus") AnnotationAssertion(Annotation( "NeuroNames:112") "central sulcus of the insula") AnnotationAssertion(Annotation( "NeuroNames:112") Annotation( ) "fissura centralis insulae") AnnotationAssertion(Annotation( "NeuroNames:112") Annotation( ) "sulcus centralis insulae") AnnotationAssertion( "UBERON:0035925") AnnotationAssertion(rdfs:label "central sulcus of insula") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ) SubClassOf(Annotation( "HBA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (preculminate fissure of cerebellum) AnnotationAssertion( ) AnnotationAssertion( "FMA:83736") AnnotationAssertion( "HBA:9408") AnnotationAssertion( "MBA:1095") AnnotationAssertion( "RadLex:RID6871") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) Annotation( ) "fissura preculminalis") AnnotationAssertion(Annotation( "FMA:83736") "preculminate fissure") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "HBA:9408") Annotation( ) "PCF") AnnotationAssertion(Annotation( "NeuroNames:652") "postcentral fissure of the cerebellum") AnnotationAssertion( "UBERON:0035926") AnnotationAssertion(rdfs:label "preculminate fissure of cerebellum") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (sulcus of parietal lobe) AnnotationAssertion( ) AnnotationAssertion( "HBA:9370") AnnotationAssertion(Annotation( "HBA:9370") Annotation( ) "parietal lobe sulci") AnnotationAssertion( "parietal lobe sulcus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "HBA:9370") Annotation( ) "PLs") AnnotationAssertion( "UBERON:0035927") AnnotationAssertion(rdfs:label "sulcus of parietal lobe") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (dorsolateral part of supraoptic nucleus) AnnotationAssertion( ) AnnotationAssertion( "FMA:76770") AnnotationAssertion( "HBA:4594") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) Annotation( ) "pars dorsolateralis nuclei supraoptici") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:3151") "dorsolateral part of the supraoptic nucleus") AnnotationAssertion(Annotation( "NeuroNames:3151") "supraoptic nucleus proper") AnnotationAssertion(Annotation( "NeuroNames:3151") "supraoptic nucleus, dorsolateral part") AnnotationAssertion(Annotation( "NeuroNames:3151") "supraoptic nucleus, proper") AnnotationAssertion( "UBERON:0035928") AnnotationAssertion(rdfs:label "dorsolateral part of supraoptic nucleus") SubClassOf(Annotation( "HBA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (retro-olivary nucleus) AnnotationAssertion( ) AnnotationAssertion( "DHBA:12467") AnnotationAssertion( "FMA:72476") AnnotationAssertion( "HBA:9181") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) Annotation( ) "nucleus retro-olivaris") AnnotationAssertion(Annotation( "FMA:72476") "retro-olivary cell group") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "DHBA:12467") Annotation( ) "RO") AnnotationAssertion( "UBERON:0035930") AnnotationAssertion(rdfs:label "retro-olivary nucleus") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (sagittal stratum) AnnotationAssertion( "DHBA:12082") AnnotationAssertion( "FMA:277107") AnnotationAssertion( "HBA:265505286") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "DHBA:12082") Annotation( ) "sst") AnnotationAssertion( "UBERON:0035931") AnnotationAssertion(rdfs:label "sagittal stratum") SubClassOf( ) SubClassOf(Annotation( "DHBA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (anterior segment of paracentral lobule) AnnotationAssertion( "FMA:273508") AnnotationAssertion( "HBA:4071") AnnotationAssertion(Annotation( "FMA:273508") "anterior part of paracentral lobule") AnnotationAssertion(Annotation( "FMA:273508") "medial segment of precentral gyrus") AnnotationAssertion(Annotation( "HBA:4071") "paracentral lobule, anterior part") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "HBA:4071") Annotation( ) "PCLa") AnnotationAssertion( "UBERON:0035932") AnnotationAssertion(rdfs:label "anterior segment of paracentral lobule") SubClassOf(Annotation( "HBA"^^xsd:string) ) SubClassOf( ) SubClassOf(Annotation( "HBA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (paracentral lobule) AnnotationAssertion(Annotation( ) "The junction of the precentral gyrus and postcentral gyrus on the medial surface of the cerebral cortex. It lies across the boundary between the frontal lobe and the parietal lobe.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0005601") AnnotationAssertion( "FMA:77534") AnnotationAssertion( "RadLex:RID6449") AnnotationAssertion( "Talairach:1047") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) Annotation( ) "lobulus paracentralis") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035933") AnnotationAssertion(rdfs:label "paracentral lobule") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (posterior segment of paracentral lobule) AnnotationAssertion( "FMA:273511") AnnotationAssertion( "HBA:4125") AnnotationAssertion(Annotation( "FMA:273511") "posterior part of paracentral lobule") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "HBA:4125") Annotation( ) "PCLp") AnnotationAssertion( "UBERON:0035934") AnnotationAssertion(rdfs:label "posterior segment of paracentral lobule") SubClassOf(Annotation( "HBA"^^xsd:string) ) SubClassOf( ) SubClassOf(Annotation( "HBA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (Meyer's loop of optic radiation) AnnotationAssertion(Annotation( ) "Part of the optic radiation which sweeps back on itself into the temporal lobe, just lateral to the temporal horn of the lateral ventricle.") AnnotationAssertion(Annotation( "FMA"^^xsd:string) "in FMA this is disjoint from radiation of cerebral hemisphere, which conflicts with our radiopedia definition") AnnotationAssertion( ) AnnotationAssertion( "FMA:280849") AnnotationAssertion( "HBA:265505214") AnnotationAssertion( "Meyer's loop") AnnotationAssertion(Annotation( "NeuroNames:1466") "inferior optic radiation") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "HBA:265505214") Annotation( ) "or-lp") AnnotationAssertion( "UBERON:0035935") AnnotationAssertion(rdfs:label "Meyer's loop of optic radiation") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (arcuate fasciculus) AnnotationAssertion(Annotation( ) "The arcuate fasciculus (Latin, curved bundle) is the neural pathway connecting the posterior part of the temporoparietal junction with the frontal cortex in the brain and is now considered as part of the Superior longitudinal fasciculus.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "DHBA:10569") AnnotationAssertion( "FMA:276650") AnnotationAssertion( "HBA:9231") AnnotationAssertion(Annotation( "FMA:276650") "arcuate fascicle") AnnotationAssertion(Annotation( "FMA:276650") "cerebral arcuate fasciculus") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) Annotation( ) "fasciculus arcuatus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "DHBA:10569") Annotation( ) "AF") AnnotationAssertion(Annotation( "HBA:9231") Annotation( ) "ARF") AnnotationAssertion(Annotation( ) "arcuate fascicle") AnnotationAssertion(Annotation( "NeuroNames:2063") "arcuate fasciculus") AnnotationAssertion(Annotation( "NeuroNames:2063") Annotation( ) "fibrae arcuatae cerebri") AnnotationAssertion( "UBERON:0035937") AnnotationAssertion(rdfs:label "arcuate fasciculus") SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "DHBA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (amiculum of inferior olive) AnnotationAssertion( ) AnnotationAssertion( "DHBA:12728") AnnotationAssertion( "FMA:72611") AnnotationAssertion( "HBA:265505538") AnnotationAssertion(Annotation( "FMA:72611") "amiculum of olive") AnnotationAssertion(Annotation( "DHBA:12728") "amiculum of the olive") AnnotationAssertion(Annotation( "FMA:72611") "amiculum olivae") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) Annotation( ) "amiculum olivare") AnnotationAssertion(Annotation( "FMA:72611") "inferior olive amiculum") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "DHBA:12728") Annotation( ) "ami") AnnotationAssertion( "UBERON:0035938") AnnotationAssertion(rdfs:label "amiculum of inferior olive") SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf(Annotation( "HBA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (amiculum) AnnotationAssertion(Annotation( ) "A dense surrounding coat of white fibers, as the sheath of the inferior olive and of the dentate nucleus.") AnnotationAssertion( "FMA:83870") AnnotationAssertion( "RadLex:RID6708") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "amicula") AnnotationAssertion( "UBERON:0035939") AnnotationAssertion(rdfs:label "amiculum") SubClassOf( ) # Class: (central medullary reticular nuclear complex) AnnotationAssertion( ) AnnotationAssertion( "FMA:70663") AnnotationAssertion( "HBA:9588") AnnotationAssertion(Annotation( "FMA:70663") "central group (medullary reticular formation)") AnnotationAssertion(Annotation( "FMA:70663") "central medullary reticular complex") AnnotationAssertion(Annotation( "FMA:70663") "central medullary reticular group") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) Annotation( ) "nuclei centrales myelencephali") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "HBA:9588") Annotation( ) "CMRt") AnnotationAssertion(Annotation( "NeuroNames:729") "central group (medullary reticular formation)") AnnotationAssertion(Annotation( "NeuroNames:729") "central medullary reticular group") AnnotationAssertion(Annotation( "NeuroNames:729") Annotation( ) "nuclei centrales myelencephali") AnnotationAssertion( "UBERON:0035940") AnnotationAssertion(rdfs:label "central medullary reticular nuclear complex") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ) SubClassOf(Annotation( "HBA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (Kimura membrane) AnnotationAssertion(Annotation( ) Annotation( ) Annotation( ) Annotation( "MGI:smith") "The thickening of the lower surface of the tectorial membrane into which the hair bundles of the outer hair cells are embedded.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035941") AnnotationAssertion(rdfs:label "Kimura membrane") SubClassOf( ) SubClassOf(Annotation( "cjm"^^xsd:string) ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (space between upper and lower jaws) AnnotationAssertion(Annotation( "UBERON:cjm"^^xsd:string) "The space between the upper jaw skeleton and lower jaw skeleton (including teeth) that is formed when when biting.") AnnotationAssertion( "uberon") AnnotationAssertion( "bite") AnnotationAssertion( "UBERON:0035942") AnnotationAssertion(rdfs:label "space between upper and lower jaws") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (life cycle temporal boundary) AnnotationAssertion(Annotation( ) "A temporal boundary connecting two life cycle stages that follow in immediate succession. A temporal boundary is an abstract, instantaneous entity.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035943") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "life cycle temporal boundary") SubClassOf( ) # Class: (life-death temporal boundary) AnnotationAssertion(Annotation( ) Annotation( ) "A life cycle temporal boundary that marks the end of the life cycle of the organism.") AnnotationAssertion( "end of life cycle") AnnotationAssertion( "moment of death") AnnotationAssertion( "time of death") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "death") AnnotationAssertion( "end of life") AnnotationAssertion( "UBERON:0035944") AnnotationAssertion(rdfs:label "life-death temporal boundary") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (start of life cycle) AnnotationAssertion(Annotation( ) Annotation( ) "A life cycle temporal boundary that marks the start of the life cycle of the organism.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035945") AnnotationAssertion(rdfs:label "start of life cycle") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (start of neonate stage) AnnotationAssertion(Annotation( ) Annotation( ) "A life cycle temporal boundary that marks the start of the neonate stage of the organism.") AnnotationAssertion( "moment of birth") AnnotationAssertion( "time of birth") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "birth") AnnotationAssertion( "UBERON:0035946") AnnotationAssertion(rdfs:label "start of neonate stage") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete cerebrum) AnnotationAssertion(Annotation( ) Annotation( ) "Historically the term cerebrum has been used for several different parts of the CNS including the whole brain, the cerebral hemispheres and the sum of cerebral cortex and adjacent cerebral white matter. A thorough discussion of the definitional history is to be found in Anthoney-1994.") AnnotationAssertion( "UBERON:0001869") AnnotationAssertion( "UBERON:0001893") AnnotationAssertion( "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=2068") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035955") AnnotationAssertion(rdfs:label "obsolete cerebrum") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (epididymal lumen) AnnotationAssertion(Annotation( ) Annotation( "GOC:DOS") "The lumen of the epididymis.") AnnotationAssertion( ) AnnotationAssertion( "FMA:18274") AnnotationAssertion(Annotation( "FMA:18274") "epididymis lumen") AnnotationAssertion(Annotation( "FMA:18274") "lumen of epididymis") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035956") AnnotationAssertion(rdfs:label "epididymal lumen") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (antotic pillar) AnnotationAssertion(Annotation( "ISBN:978-0226870137") "The posteriormost orbital pillar, in front of the otic capsule.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035957") AnnotationAssertion(rdfs:label "antotic pillar") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (preoptic pillar) AnnotationAssertion(Annotation( "ISBN:978-0226870137") "The anteriormost orbital pillar, in front of the otic capsule.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035958") AnnotationAssertion(rdfs:label "preoptic pillar") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (orbital pillar) AnnotationAssertion(Annotation( "ISBN:978-0226870137") Annotation( "UBERON:cjm"^^xsd:string) "A skeletal projection in the chondrocranium that developmentally connects the orbital cartilage and may develop into bone regions.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035959") AnnotationAssertion(rdfs:label "orbital pillar") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete proboscis) AnnotationAssertion(Annotation( "BTO:0001117") "1: The trunk of an elephant; also: any long flexible snout. 2: Any of various elongated or extensible tubular processes as the sucking organ of a butterfly of the oral region of an invertebrate.") AnnotationAssertion( "BTO:0001117") AnnotationAssertion( "UBERON:0014479") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035961") AnnotationAssertion(rdfs:label "obsolete proboscis") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (supravaginal part of cervix) AnnotationAssertion(Annotation( "BTO:0001851") Annotation( "Dorlands_Medical_Dictionary:MerckSource") "Supravaginal portion of cervix: the part of the cervix uteri that does not protrude into the vagina.") AnnotationAssertion( "BTO:0001851") AnnotationAssertion( "FMA:77055") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) Annotation( ) "portio supravaginalis cervicis") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035962") AnnotationAssertion(rdfs:label "supravaginal part of cervix") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (epithelial lining fluid) AnnotationAssertion(Annotation( ) Annotation( "BTO:0005566") "Epithelial lining fluid forms a thin fluid layer that covers the mucosa of the alveoli, the small airways, and the large airways.") AnnotationAssertion( "BTO:0005566") AnnotationAssertion( "FMA:276456") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0005566") "ELF") AnnotationAssertion( "UBERON:0035963") AnnotationAssertion(rdfs:label "epithelial lining fluid") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (promontory of tympanic cavity) AnnotationAssertion(Annotation( ) "The promontory of the tympanic cavity, better known as the cochlear promontory is a rounded hollow prominence, formed by the projection outward of the first turn of the cochlea. It is placed between the fenestrae, and is furrowed on its surface by small grooves, for the lodgement of branches of the tympanic plexus. A minute spicule of bone frequently connects the promontory to the pyramidal eminence.") AnnotationAssertion( ) AnnotationAssertion( "BTO:0003089") AnnotationAssertion( "FMA:77694") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) Annotation( ) "promontorium tympani") AnnotationAssertion(Annotation( "FMA:77694") "tympanic cavity promontory") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "promontorium") AnnotationAssertion(Annotation( ) "promontory of the tympanic cavity") AnnotationAssertion( "UBERON:0035964") AnnotationAssertion(rdfs:label "promontory of tympanic cavity") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (wall of blood vessel) AnnotationAssertion( "BTO:0004378") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37987") AnnotationAssertion( "FMA:67473") AnnotationAssertion(Annotation( "FMA:67473") "blood vessel wall") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0004378") "vascular wall") AnnotationAssertion( "UBERON:0035965") AnnotationAssertion(rdfs:label "wall of blood vessel") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (scleral lamina cribrosa) AnnotationAssertion(Annotation( "BTO:0004277") Annotation( "Dorlands_Medical_Dictionary:MerckSource") "The perforated part of the sclera through which pass the axons of the retinal ganglion cells.") AnnotationAssertion( ) AnnotationAssertion( "BTO:0004277") AnnotationAssertion( "FMA:58371") AnnotationAssertion(Annotation( "FMA:58371") "lamina cribrosa of sclera") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) Annotation( ) "lamina cribrosa sclerae") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "BTO:0004277") "lamina cribrosa of sclera") AnnotationAssertion( "UBERON:0035966") AnnotationAssertion(rdfs:label "scleral lamina cribrosa") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ) SubClassOf(Annotation( "BTO"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (alveolar mucosa) AnnotationAssertion(Annotation( ) Annotation( "BTO:0004046") "The mucous membrane apical to the attached gingiva.") AnnotationAssertion( "BTO:0004046") AnnotationAssertion( "FMA:289360") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035967") AnnotationAssertion(rdfs:label "alveolar mucosa") SubClassOf( ) SubClassOf(Annotation( "BTO"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "BTO"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (bulboid corpuscle) AnnotationAssertion(Annotation( ) Annotation( "ISBN:9780849388118") "A receptor in the transitional zone between mucous membrane and skin.") AnnotationAssertion( "Some investigators are doubtful to its existence; or may be a degenerative stage of peripheral nerves[ISBN:9780849388118]") AnnotationAssertion( ) AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "bulboid corpuscles") AnnotationAssertion(Annotation( ) "end bulbs") AnnotationAssertion(Annotation( ) "end bulbs of krause") AnnotationAssertion(Annotation( ) "end-bulb of krause") AnnotationAssertion(Annotation( ) "end-bulbs of krause") AnnotationAssertion(Annotation( ) "krause corpuscle") AnnotationAssertion(Annotation( ) "krause's end-bulbs") AnnotationAssertion(Annotation( "ISBN:9780849388118") "mucocutaneous corpuscle") AnnotationAssertion(Annotation( "ISBN:9780849388118") "mucocutaneous end-organ") AnnotationAssertion(Annotation( ) "spheroidal tactile corpuscles") AnnotationAssertion( "UBERON:0035968") AnnotationAssertion(rdfs:label "bulboid corpuscle") SubClassOf( ) # Class: (encapsulated tactile receptor) AnnotationAssertion(Annotation( "UBERON:cjm"^^xsd:string) "A tacile mechanoreceptor that lacks a capsule.") AnnotationAssertion( "FMA:83995") AnnotationAssertion(Annotation( "FMA:83995") "encapsulated nerve ending") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0035969") AnnotationAssertion(rdfs:label "encapsulated tactile receptor") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (calcar avis of the lateral ventricle) AnnotationAssertion(Annotation( ) "On the medial wall of the posterior cornu of the lateral ventricle is a longitudinal eminence, the calcar avis (hippocampus minor), which is an involution of the ventricular wall produced by the calcarine fissure. It is sometimes visible on ultrasonogram.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BTO:0004691") AnnotationAssertion( "DHBA:12095") AnnotationAssertion( "FMA:83707") AnnotationAssertion(Annotation( "BTO:0004691") "hippocampus minor") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "DHBA:12095") Annotation( ) "CalA") AnnotationAssertion(Annotation( "BTO:0004691") "Haller unguis") AnnotationAssertion(Annotation( "BTO:0004691") "Morand spur") AnnotationAssertion(Annotation( "BTO:0004691") "calcar") AnnotationAssertion(Annotation( "BTO:0004691") "calcar avis") AnnotationAssertion(Annotation( "BTO:0004691") "calcarine spur") AnnotationAssertion(Annotation( "BTO:0004691") "ergot") AnnotationAssertion(Annotation( "BTO:0004691") "minor hippocampus") AnnotationAssertion(Annotation( "NeuroNames:210") Annotation( ) "pes hippocampi minor") AnnotationAssertion(Annotation( "BTO:0004691") "unguis avis") AnnotationAssertion( "UBERON:0035970") AnnotationAssertion(rdfs:label "calcar avis of the lateral ventricle") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "BTO"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (postsubiculum) AnnotationAssertion(Annotation( "NLX:144245") "Division of subicular cortex characterized by projections from the anterodorsal thalamic nucleus and to a lesser extent the anteroventral nucleus, bordered ventrally and laterally by the presubiculum and dorsally and medially by the retrosplenial granular a cortex.. The border is characterized by an abrupt change in the cyto- and chemoarchitecture.") AnnotationAssertion( ) AnnotationAssertion( "MBA:1037") AnnotationAssertion( "NLX:144245") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "MBA:1037") Annotation( ) "POST") AnnotationAssertion(Annotation( "NLX:144245") "postsubicular cortex") AnnotationAssertion( "UBERON:0035971") AnnotationAssertion(rdfs:label "postsubiculum") SubClassOf(Annotation( "MBA") ) SubClassOf( ) SubClassOf(Annotation( "MBA") ObjectSomeValuesFrom( )) # Class: (interanterodorsal nucleus of the thalamus) AnnotationAssertion(Annotation( "NLX:144468") "A group of nerve cells that bridges the midline of the thalamus between the anterodorsal nucleus of the thalamus of the left and right sides. According to Crosby (1962), it is more developed and consistently present in rodents than in primates (adapted from Brain Info).") AnnotationAssertion( ) AnnotationAssertion( "MBA:1113") AnnotationAssertion( "NLX:144468") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "MBA:1113") Annotation( ) "IAD") AnnotationAssertion(Annotation( "NLX:144468") "interanterodorsal nucleus of thalamus") AnnotationAssertion(Annotation( "NeuroNames:1273") "interanterodorsal nucleus of the thalamus") AnnotationAssertion(Annotation( "NeuroNames:1273") "interanterodorsal nucleus thalamus") AnnotationAssertion(Annotation( "NeuroNames:1273") "interanterodorsal thalamic nucleus") AnnotationAssertion(Annotation( "NeuroNames:1273") Annotation( ) "nucleus commissura interanterodorsalis") AnnotationAssertion(Annotation( "NeuroNames:1273") Annotation( ) "nucleus interanterodorsalis") AnnotationAssertion( "UBERON:0035972") AnnotationAssertion(rdfs:label "interanterodorsal nucleus of the thalamus") SubClassOf(Annotation( "MBA") ) SubClassOf(Annotation( "MBA") ObjectSomeValuesFrom( )) # Class: (nucleus incertus) AnnotationAssertion(Annotation( "NLX:144477") "Distinct cell group in caudoventral regions of the pontine periventricular gray, adjacent to the ventromedial border of the caudal dorsal tegmental nucleus.") AnnotationAssertion( ) AnnotationAssertion( "DHBA:146034972") AnnotationAssertion( "DMBA:17084") AnnotationAssertion( "MBA:604") AnnotationAssertion( "NLX:144477") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "DMBA:17084") Annotation( ) "Inc") AnnotationAssertion(Annotation( "DHBA:146034972") Annotation( ) "NI") AnnotationAssertion(Annotation( "MBA:604") Annotation( ) "NI") AnnotationAssertion(Annotation( "NLX:144477") Annotation( ) "NI, CG0, CGalpha, CGbeta") AnnotationAssertion(Annotation( "NLX:144477") "central Gray pars 0") AnnotationAssertion(Annotation( "NLX:144477") "central Gray part alpha") AnnotationAssertion(Annotation( "NLX:144477") "charles Watson. - 5th ed.)") AnnotationAssertion(Annotation( "NeuroNames:1093") "nucleus incertus (Streeter)") AnnotationAssertion( "UBERON:0035973") AnnotationAssertion(rdfs:label "nucleus incertus") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (anteroventral preoptic nucleus) AnnotationAssertion( ) AnnotationAssertion( "MBA:263") AnnotationAssertion( "NLX:17240") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "MBA:263") Annotation( ) "AVP") AnnotationAssertion(Annotation( "NLX:17240") Annotation( ) "anteroventral preoptic nuclei") AnnotationAssertion( "UBERON:0035974") AnnotationAssertion(rdfs:label "anteroventral preoptic nucleus") SubClassOf( ) # Class: (intergeniculate leaflet of the lateral geniculate complex) AnnotationAssertion( ) AnnotationAssertion( "MBA:27") AnnotationAssertion( "NLX:144470") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "MBA:27") Annotation( ) "IGL") AnnotationAssertion(Annotation( "NeuroNames:1956") "intergeniculate leaflet of the lateral geniculate complex") AnnotationAssertion(Annotation( "NeuroNames:1956") "intergeniculate leaflet, lateral geniculate complex") AnnotationAssertion(Annotation( "NeuroNames:1956") "lateral geniculate complex, intergeniculate leaflet") AnnotationAssertion( "UBERON:0035975") AnnotationAssertion(rdfs:label "intergeniculate leaflet of the lateral geniculate complex") SubClassOf(Annotation( "MBA") ) SubClassOf(Annotation( "NIFSTD"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (accessory abducens nucleus) AnnotationAssertion(Annotation( "NLX:144454") "A small cluster of neurons in the pontine reticular formation in some mammals, containing the majority of motoneurons innervating thenretractor bulbi muscles of the eye.") AnnotationAssertion( ) AnnotationAssertion( "MBA:568") AnnotationAssertion( "NLX:144454") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "MBA:568") Annotation( ) "ACVI") AnnotationAssertion( "UBERON:0035976") AnnotationAssertion(rdfs:label "accessory abducens nucleus") SubClassOf( ) # Class: (bed nucleus of the accessory olfactory tract) AnnotationAssertion(Annotation( "NeuroNames:1179") "A group of cells near the surface of the brain between the supraoptic nucleus and the cortical amygdalar nucleus in the rat ( Swanson-1998 ) and the mouse ( Paxinos-2001 ). It is one of five subdivisions of the medial amygdalar nucleus.") AnnotationAssertion( ) AnnotationAssertion( "MBA:292") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "MBA:292") Annotation( ) "BA") AnnotationAssertion(Annotation( "NeuroNames:1179") "accessory olfactory formation") AnnotationAssertion(Annotation( "NeuroNames:1179") "bed nucleus accessory olfactory tract (Scalia-Winans)") AnnotationAssertion(Annotation( "NeuroNames:1179") "bed nucleus of the accessory olfactory tract") AnnotationAssertion(Annotation( "NeuroNames:1179") "nucleus of the accessory olfactory tract") AnnotationAssertion( "UBERON:0035977") AnnotationAssertion(rdfs:label "bed nucleus of the accessory olfactory tract") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (dopaminergic cell groups) AnnotationAssertion(Annotation( "NeuroNames:3138") "Collections of neurons in the central nervous system that have been demonstrated by histochemical fluorescence to contain the neurotransmitter dopamine ( Fuxe-1970 ).") AnnotationAssertion( ) AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:3138") "DA cell groups") AnnotationAssertion(Annotation( "NeuroNames:3138") "dopaminergic cell groups") AnnotationAssertion(Annotation( "NeuroNames:3138") "dopaminergic nuclei") AnnotationAssertion( "UBERON:0035999") AnnotationAssertion(rdfs:label "dopaminergic cell groups") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (A8 dopaminergic cell group) AnnotationAssertion( ) AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:1061") "A8 cell group") AnnotationAssertion(Annotation( "NeuroNames:1061") "A8 dopamine cells") AnnotationAssertion(Annotation( "NeuroNames:1061") "dopaminergic group A8") AnnotationAssertion(Annotation( "NeuroNames:1061") "lateral midbrain reticular formation A8 group") AnnotationAssertion( "UBERON:0036000") AnnotationAssertion(rdfs:label "A8 dopaminergic cell group") SubClassOf( ) # Class: (A14 dopaminergic cell group) AnnotationAssertion( ) AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:1200") "A14 cell group") AnnotationAssertion(Annotation( "NeuroNames:1200") "A14 dopamine cells") AnnotationAssertion(Annotation( "NeuroNames:1200") "cell group A14") AnnotationAssertion(Annotation( "NeuroNames:1200") "dopaminergic group A14") AnnotationAssertion( "UBERON:0036001") AnnotationAssertion(rdfs:label "A14 dopaminergic cell group") SubClassOf( ) # Class: (A15 dopaminergic cell group) AnnotationAssertion( ) AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:1798") "A15 cell group") AnnotationAssertion(Annotation( "NeuroNames:1798") "dopaminergic group A15") AnnotationAssertion( "UBERON:0036002") AnnotationAssertion(rdfs:label "A15 dopaminergic cell group") SubClassOf( ) # Class: (A9 dopaminergic cell group) AnnotationAssertion( ) AnnotationAssertion( "NLX:54027") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:1811") "A9 cell group") AnnotationAssertion(Annotation( "NeuroNames:1811") "dopaminergic group A9") AnnotationAssertion( "UBERON:0036003") AnnotationAssertion(rdfs:label "A9 dopaminergic cell group") SubClassOf( ) # Class: (A17 dopaminergic cell group) AnnotationAssertion( ) AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:1832") "A17 cell group") AnnotationAssertion(Annotation( "NeuroNames:1832") "dopaminergic group A17") AnnotationAssertion( "UBERON:0036004") AnnotationAssertion(rdfs:label "A17 dopaminergic cell group") SubClassOf( ) # Class: (A10 dopaminergic cell group) AnnotationAssertion( ) AnnotationAssertion( "NLX:144071") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:1835") "A10 cell group") AnnotationAssertion(Annotation( "NeuroNames:1835") "dopaminergic group A10") AnnotationAssertion( "UBERON:0036005") AnnotationAssertion(rdfs:label "A10 dopaminergic cell group") SubClassOf( ) # Class: (A11 dopaminergic cell group) AnnotationAssertion( ) AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:1850") "A11 cell group") AnnotationAssertion(Annotation( "NeuroNames:1850") "A11 dopamine cells") AnnotationAssertion(Annotation( "NeuroNames:1850") "dopaminergic group A11") AnnotationAssertion( "UBERON:0036006") AnnotationAssertion(rdfs:label "A11 dopaminergic cell group") SubClassOf( ) # Class: (A13 dopaminergic cell group) AnnotationAssertion(Annotation( "NLX:91101") "A group of cells that fluoresce for dopamine and are distributed in clusters that, in the primate, are ventral and medial to the mammillothalamic tract of the hypothalamus; a few extend into the reuniens nucleus of the thalamus (Felten-1983). In the mouse A13 is located ventral to the mammillothalamic tract of the thalamus in the zona incerta (adapted from Brain Info).") AnnotationAssertion( ) AnnotationAssertion( "MBA:796") AnnotationAssertion( "NLX:91101") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "MBA:796") Annotation( ) "A13") AnnotationAssertion(Annotation( "NeuroNames:1851") "A13 cell group") AnnotationAssertion(Annotation( "NeuroNames:1851") "A13 dopamine cells") AnnotationAssertion(Annotation( "NeuroNames:1851") "dopaminergic group A13") AnnotationAssertion(Annotation( "NeuroNames:1851") "zona incerta, dopaminergic group") AnnotationAssertion( "UBERON:0036007") AnnotationAssertion(rdfs:label "A13 dopaminergic cell group") SubClassOf( ) SubClassOf(Annotation( "MBA") ObjectSomeValuesFrom( )) # Class: (A16 dopaminergic cell group) AnnotationAssertion( ) AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:1867") "A16 cell group") AnnotationAssertion(Annotation( "NeuroNames:1867") "dopaminergic group A16") AnnotationAssertion( "UBERON:0036008") AnnotationAssertion(rdfs:label "A16 dopaminergic cell group") SubClassOf( ) # Class: (A12 dopaminergic cell group) AnnotationAssertion( ) AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:1880") "A12 cell group") AnnotationAssertion(Annotation( "NeuroNames:1880") "A12 dopamine cells") AnnotationAssertion(Annotation( "NeuroNames:1880") "dopaminergic group A12") AnnotationAssertion( "UBERON:0036009") AnnotationAssertion(rdfs:label "A12 dopaminergic cell group") SubClassOf( ) # Class: (Aaq dopaminergic cell group) AnnotationAssertion( ) AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:1889") "Aaq cell group") AnnotationAssertion(Annotation( "NeuroNames:1889") "dopaminergic group Aaq") AnnotationAssertion( "UBERON:0036010") AnnotationAssertion(rdfs:label "Aaq dopaminergic cell group") SubClassOf( ) # Class: (telencephalic dopaminergic cell group) AnnotationAssertion( ) AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NeuroNames:1770") "telencephalic DA cell group") AnnotationAssertion(Annotation( "NeuroNames:1770") "telencephalic DA neurons") AnnotationAssertion(Annotation( "NeuroNames:1770") "telencephalic dopamine cells") AnnotationAssertion(Annotation( "NeuroNames:1770") "telencephalic dopaminergic group") AnnotationAssertion( "UBERON:0036011") AnnotationAssertion(rdfs:label "telencephalic dopaminergic cell group") SubClassOf( ) # Class: (nucleus of the brachium of the inferior colliculus) AnnotationAssertion( ) AnnotationAssertion( "HBA:9483") AnnotationAssertion( "MBA:580") AnnotationAssertion( "NLX:144476") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "HBA:9483") Annotation( ) "BrC") AnnotationAssertion(Annotation( "MBA:580") Annotation( ) "NB") AnnotationAssertion(Annotation( "NeuroNames:1112") "brachial nucleus of the inferior colliculus") AnnotationAssertion(Annotation( "NeuroNames:1112") "nucleus brachium inferior colliculus") AnnotationAssertion(Annotation( "NeuroNames:1112") "nucleus of the brachium of the inferior colliculus") AnnotationAssertion( "UBERON:0036012") AnnotationAssertion(rdfs:label "nucleus of the brachium of the inferior colliculus") SubClassOf(Annotation( "HBA"^^xsd:string) ) SubClassOf(Annotation( "HBA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (intergluteal cleft) AnnotationAssertion(Annotation( ) "The line that divided the gluteal regions of the body.") AnnotationAssertion( "FMA:20234") AnnotationAssertion(Annotation( "FMA:20234") "anal cleft") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) Annotation( ) "crena analis") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) Annotation( ) "crena ani") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) Annotation( ) "crena interglutealis") AnnotationAssertion(Annotation( "FMA:20234") "intergluteal crease") AnnotationAssertion(Annotation( "FMA:20234") "natal cleft") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0036013") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "intergluteal cleft") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (gluteal sulcus) AnnotationAssertion(Annotation( ) Annotation( ) "A horizontal crease formed by the inferior aspect of the buttocks and the posterior upper leg.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:20233") AnnotationAssertion(Annotation( ) Annotation( "FMA:20233") "gluteal fold") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) Annotation( ) "sulcus glutealis") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "gluteal crease") AnnotationAssertion(Annotation( ) "horizontal gluteal crease") AnnotationAssertion( "UBERON:0036014") AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "Children with developmental dysplasia of the hips are born with uneven gluteal folds and can be diagnosed with physical examination and sonogram") AnnotationAssertion(rdfs:label "gluteal sulcus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (regurgitated substance) AnnotationAssertion(Annotation( "UBERON:cjm"^^xsd:string) "A bodily fluid consisting of the contents of the digestive tract expulsed through the anterior portion of the digestive tract.") AnnotationAssertion( "uberon") AnnotationAssertion( "regurgitate") AnnotationAssertion( "UBERON:0036017") AnnotationAssertion(rdfs:label "regurgitated substance") SubClassOf( ) # Class: (paravermic lobule X) AnnotationAssertion( "DHBA:12389") AnnotationAssertion( "HBA:4730") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "HBA:4730") Annotation( ) "PV-X") AnnotationAssertion(Annotation( "DHBA:12389") "paravermis, flocculonodular lobe portion") AnnotationAssertion( "UBERON:0036043") AnnotationAssertion(rdfs:label "paravermic lobule X") SubClassOf(Annotation( "cjm"^^xsd:string) ) SubClassOf( ) SubClassOf(Annotation( "HBA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (cerebellum vermis lobule VIIAf) AnnotationAssertion( "DHBA:12846") AnnotationAssertion( "HBA:4706") AnnotationAssertion(Annotation( "HBA:4706") Annotation( ) "VIIAf") AnnotationAssertion(Annotation( "DHBA:12846") "lobule VIIAf/crus I (folium and superior semilunar lobule)") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "DHBA:12846") Annotation( ) "CbVIIa1") AnnotationAssertion( "UBERON:0036044") AnnotationAssertion(rdfs:label "cerebellum vermis lobule VIIAf") SubClassOf( ) SubClassOf(Annotation( "HBA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (quadrangular lobule) AnnotationAssertion( "FMA:272300") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0036063") AnnotationAssertion(rdfs:label "quadrangular lobule") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (cerebellum vermis lobule VIIAt) AnnotationAssertion( "DHBA:12847") AnnotationAssertion( "HBA:4707") AnnotationAssertion(Annotation( "HBA:4707") Annotation( ) "VIIAt") AnnotationAssertion(Annotation( "DHBA:12847") "lobule VIIAt/crus II (tuber and inferior semilunar lobule)") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "DHBA:12847") Annotation( ) "CbVIIa2") AnnotationAssertion( "UBERON:0036065") AnnotationAssertion(rdfs:label "cerebellum vermis lobule VIIAt") SubClassOf( ) SubClassOf(Annotation( "HBA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (inferior endocardial cushion) AnnotationAssertion(Annotation( ) Annotation( ) Annotation( "GOC:rl") "The endocardial cushion that forms on the ventral surface of the AV canal.") AnnotationAssertion( "ventral endocardial cushion") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0036066") AnnotationAssertion(rdfs:label "inferior endocardial cushion") SubClassOf( ) # Class: (superior endocardial cushion) AnnotationAssertion(Annotation( ) Annotation( ) Annotation( "GOC:rl") "The endocardial cushion that forms on the dorsal surface of the AV canal.") AnnotationAssertion( "dorsal endocardial cushion") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0036067") AnnotationAssertion(rdfs:label "superior endocardial cushion") SubClassOf( ) # Class: (subglottis) AnnotationAssertion(Annotation( ) Annotation( ) Annotation( "MP:0030000") "The lower portion of the larynx, extending from just beneath the vocal cords down to the top of the trachea.") AnnotationAssertion( "the structures in the subglottis are implicated in the regulation of the temperature of the breath") AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37969") AnnotationAssertion( "FMA:55477") AnnotationAssertion( "NCIT:C12280") AnnotationAssertion(Annotation( "FMA:55477") "infraglottic part of larynx") AnnotationAssertion(Annotation( "FMA:55477") "subglottic larynx") AnnotationAssertion(Annotation( "MP:0030000") "subglottic region") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0036068") AnnotationAssertion(rdfs:label "subglottis") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (tracheoesophageal fold) AnnotationAssertion(Annotation( ) Annotation( "UBERON:cjm"^^xsd:string) "One of two longitudinal ridges that develop caudal to the pharynx and fuses to give rise to the tracheoesophageal septum.") AnnotationAssertion( "NCIT:C34315") AnnotationAssertion(Annotation( "UBERON:cjm"^^xsd:string) "esophagotracheal fold") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0036069") AnnotationAssertion(rdfs:label "tracheoesophageal fold") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (tracheoesophageal septum) AnnotationAssertion(Annotation( ) "The tracheoesophageal septum is formed from the tracheoesophageal folds which fuse in the midline to form a structure called tracheoesophageal septum. It divides the esophagus from the trachea. It divides the foregut tube into the laryngotracheal tube ventrally and esophagus dorsally. Developmental abnormalities can lead to a tracheoesophageal fistula.") AnnotationAssertion( ) AnnotationAssertion( "NCIT:C34316") AnnotationAssertion(Annotation( "UBERON:cjm"^^xsd:string) "esophagotracheal septum") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "tracheoesophageal ridges") AnnotationAssertion( "UBERON:0036070") AnnotationAssertion(rdfs:label "tracheoesophageal septum") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (respiratory primordium epithelium) AnnotationAssertion( "EHDAA2:0004070") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0036072") AnnotationAssertion(rdfs:label "respiratory primordium epithelium") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (respiratory primordium mesenchyme) AnnotationAssertion( "EHDAA2:0004071") AnnotationAssertion(Annotation( "EHDAA2:0004071") "respiratory primordium associated mesenchyme") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0036073") AnnotationAssertion(rdfs:label "respiratory primordium mesenchyme") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (vein of vestibular aqueduct) AnnotationAssertion(Annotation( ) "A vein that leaves the vestibule through an individual bone canal running parallel to the vestibular aqueduct up to the dura of the posterior side of the petrosa in the area of the endolymphatic sac. It then opens in the inferior petrosal sinus or the jugular bulb. The vein receives other branches from the bone, dura and sac.") AnnotationAssertion( "FMA:52367") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) Annotation( ) "vena aqueductus vestibuli") AnnotationAssertion(Annotation( "FMA:52367") "vestibular aqueduct vein") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0036074") AnnotationAssertion(rdfs:label "vein of vestibular aqueduct") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (meningeal branch of mandibular nerve) AnnotationAssertion(Annotation( ) "The meningeal branch of the mandibular nerve (recurrent branch, nervus spinosus) is a branch of the mandibular nerve that supplies the dura mater.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:53047") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) Annotation( ) "nervus spinosus") AnnotationAssertion(Annotation( "FMA:53047") "ramus meningeus (Nervus mandibularis)") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) Annotation( ) "ramus meningeus nervus mandibularis") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "nervus spinosus") AnnotationAssertion( "UBERON:0036143") AnnotationAssertion(rdfs:label "meningeal branch of mandibular nerve") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (incisive duct) AnnotationAssertion(Annotation( ) "An infrequent rudimentary duct, or protrusion of the mucous membrane into the incisive canal, on either side of the anterior extremity of the nasal crest.") AnnotationAssertion( "horses exhibit Flehmen response but do not have an incisive duct communication between the nasal and the oral cavity because they do not breathe through their mouths, instead, the VNOs connect to the nasal passages by the nasopalatine duct") AnnotationAssertion( "FMA:77282") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) Annotation( ) "ductus incisivus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0036144") AnnotationAssertion(rdfs:comment "Taxon notes notes: In domestic mammals the Ductus incisivus is considerably better developed than in man. It is not accommodated in a Canalis incisivus, as in man, but in the Fissura palatina[NOMINA ANATOMICA VETERINARIA (2005)]") AnnotationAssertion(rdfs:label "incisive duct") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (glymphatic system) AnnotationAssertion(Annotation( ) Annotation( ) Annotation( "MGI:sbello") "Macroscopic waste clearance system that utilizes a unique system of perivascular tunnels, formed by astroglial cells, to promote efficient elimination of soluble proteins and metabolites from the central nervous system.") AnnotationAssertion( "hypothesized to be have roles such as waste clearance, distribution of compounds") AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37872") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0036145") AnnotationAssertion(rdfs:label "glymphatic system") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (cardiopharyngeal field) AnnotationAssertion(Annotation( ) Annotation( "BGEE:ann") "An region of the mesoderm that includes anterior lateral mesoderm of the first heart field plus contiguous pharyngeal mesoderm that gives rise to second-heart-field-derived regions of the heart and branchiomeric muscles.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0036146") AnnotationAssertion(rdfs:label "cardiopharyngeal field") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ) # Class: (suprapubic skin) AnnotationAssertion(Annotation( ) "Area of skin in the hypoastric region of the abdomen.") AnnotationAssertion( "uberon") AnnotationAssertion( "hypogastric skin") AnnotationAssertion( "UBERON:0036149") AnnotationAssertion(rdfs:label "suprapubic skin") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (skin appendage follicle) AnnotationAssertion(Annotation( ) Annotation( "UBERON:cjm"^^xsd:string) "An organ subunit in the skin that gives rise to cutaneous appendage.") AnnotationAssertion( "follicle") AnnotationAssertion( "cutaneous appendage follicle") AnnotationAssertion( "skin follicle") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0036150") AnnotationAssertion(rdfs:label "skin appendage follicle") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) SubClassOf( ObjectSomeValuesFrom( )) # Class: (diffuse placenta) AnnotationAssertion(Annotation( ) Annotation( ) "A placenta in which the chorionic sac meets the uterine endometrium over its entire surface. The villi of the chorion are distributed evenly throughout the surface of the chorion, and they extend into processes in the uterine endometrium.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "horses, pigs") AnnotationAssertion( "Almost the entire surface of the allantochorion is involved in formation of the placenta") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0036151") AnnotationAssertion(rdfs:label "diffuse placenta") SubClassOf( ) # Class: (cotyledonary placenta) AnnotationAssertion(Annotation( ) Annotation( ) "A placenta in which the villi clumped together into circular patches called cotyledons. The fetal cotyledon meets with maternal regions called caruncles to form the placentome where maternal-fetal exchanges take place.") AnnotationAssertion( ) AnnotationAssertion( "common to ungulates such as cows, deer, goat, and giraffes") AnnotationAssertion( "Multiple, discrete areas of attachment called cotyledons are formed by interaction of patches of allantochorion with endometrium. The fetal portions of this type of placenta are called cotyledons, the maternal contact sites (caruncles), and the cotyledon-caruncle complex a placentome") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0036152") AnnotationAssertion(rdfs:label "cotyledonary placenta") SubClassOf( ) # Class: (zonary placenta) AnnotationAssertion(Annotation( ) Annotation( ) "A placenta in which the chorionic villi have aggregated to form a broad band that circles about the center of the chorion. Such zones may be complete circles (such as those in dogs and cats) or incomplete (such as those in bears and seals). It is thought that zonary placentae form from diffuse placentae in which the villi at the ends regress, leaving only those in the center to function. At the edges of the zonary placenta is the hemophagous organ, which is green. The color is due to the degradation of hemoglobin into bilivirdin. This green organ provides iron for the developing fetus.") AnnotationAssertion( ) AnnotationAssertion( "characteristic of carnivores") AnnotationAssertion( "The placenta takes the form of a complete or incomplete band of tissue surrounding the fetus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0036153") AnnotationAssertion(rdfs:label "zonary placenta") SubClassOf( ) # Class: (discoid placenta) AnnotationAssertion(Annotation( ) Annotation( ) "A placenta in which part of the chorion remains smooth, while the other part interacts with the endometrium to form the placenta. The maternal blood cells are in direct contact with the fetal chorion.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "seen in numerous groups -- humans, mice, insectivores, rabbits, rats, and monkeys") AnnotationAssertion( "A single placenta is formed and is discoid in shape") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0036154") AnnotationAssertion(rdfs:label "discoid placenta") SubClassOf( ) # Class: (epitheliochorial placenta) AnnotationAssertion(Annotation( ) "A placenta in which all three maternal layers are retained.") AnnotationAssertion( ) AnnotationAssertion( "Horses, swine, ruminants") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0036161") AnnotationAssertion(rdfs:label "epitheliochorial placenta") SubClassOf( ) # Class: (endotheliochorial placenta) AnnotationAssertion(Annotation( ) "A placenta in which the only maternal layer retained is the uterine endothelium.") AnnotationAssertion( ) AnnotationAssertion( "dogs, cats") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0036162") AnnotationAssertion(rdfs:label "endotheliochorial placenta") SubClassOf( ) # Class: (hemochorial placenta) AnnotationAssertion(Annotation( ) "A placenta in which no maternal layers are retained.") AnnotationAssertion( ) AnnotationAssertion( "humans, rodents") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0036163") AnnotationAssertion(rdfs:label "hemochorial placenta") SubClassOf( ) # Class: (ambient gyrus) AnnotationAssertion(Annotation( "NeuroNames:2072") "A rostral part of the parahippocampal gyrus.") AnnotationAssertion( "Some authors regard it as part of the gyrus underlying the uncus ( Ture-1999 ), others as a synonym for limen insula.") AnnotationAssertion( ) AnnotationAssertion( "DHBA:12166") AnnotationAssertion(Annotation( "DHBA:12166") "ambiens gyrus") AnnotationAssertion(Annotation( "DHBA:12166") Annotation( ) "gyrus ambiens") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "DHBA:12166") Annotation( ) "AG") AnnotationAssertion(Annotation( "NeuroNames:2072") "limen insula") AnnotationAssertion( "UBERON:0036164") AnnotationAssertion(rdfs:label "ambient gyrus") SubClassOf(Annotation( "DHBA"^^xsd:string) ) SubClassOf( ) SubClassOf(Annotation( "DHBA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (Sattler's layer) AnnotationAssertion(Annotation( ) "Sattler's layer is layer of medium diameter blood vessels of the choroid.") AnnotationAssertion( ) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0036167") AnnotationAssertion(rdfs:comment "Some authors consider the vascular region of the choroid as being two separate layers, namely the Sattler's and Haller's layers, and some consider the lamina fusca as being either of scleral or choroidal origin.") AnnotationAssertion(rdfs:label "Sattler's layer") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (Haller's layer) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0036168") AnnotationAssertion(rdfs:comment "Some authors consider the vascular region of the choroid as being two separate layers, namely the Sattler's and Haller's layers, and some consider the lamina fusca as being either of scleral or choroidal origin.") AnnotationAssertion(rdfs:label "Haller's layer") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (palmaris brevis) AnnotationAssertion(Annotation( ) "The Palmaris brevis is a thin, quadrilateral muscle, placed beneath the integument of the ulnar side of the hand. It arises by tendinous fasciculi from the transverse carpal ligament and palmar aponeurosis; the fleshy fibers are inserted into the skin on the ulnar border of the palm of the hand. The muscle is innervated by the superficial branch of the ulnar nerve, containing fibers from the eighth cervical and first thoracic nerves.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:37381") AnnotationAssertion(Annotation( ) Annotation( "FMA:TA"^^xsd:string) Annotation( ) "musculus palmaris brevis") AnnotationAssertion(Annotation( ) Annotation( "FMA:37381") "palmaris brevis muscle") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0036172") AnnotationAssertion(rdfs:label "palmaris brevis") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (abductor digiti minimi of hand) AnnotationAssertion(Annotation( ) "The Abductor minimi digiti (Abductor digiti quinti) is situated on the ulnar border of the palm of the hand. It arises from the pisiform bone and from the tendon of the Flexor carpi ulnaris, and ends in a flat tendon, which divides into two slips; one is inserted into the ulnar side of the base of the first phalanx of the little finger; the other into the ulnar border of the aponeurosis of the Extensor digiti quinti proprius. In case of polydactyly it may insert to the sixth finger instead, if there is one.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:37382") AnnotationAssertion(Annotation( "FMA:37382") "abductor digiti minimi muscle of hand") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) Annotation( ) "musculus abductor digiti minimi") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "abductor digiti minimi (hand)") AnnotationAssertion(Annotation( ) "abductor digiti minimi manus") AnnotationAssertion(Annotation( ) "abductor digiti minimi of hand") AnnotationAssertion(Annotation( ) "abductor digiti quinti muscle (hand)") AnnotationAssertion( "UBERON:0036173") AnnotationAssertion(rdfs:label "abductor digiti minimi of hand") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (flexor digiti minimi brevis of hand) AnnotationAssertion(Annotation( ) "The flexor digiti minimi brevis is a muscle in the hand that flexes the little finger. It lies in the same plane as the abductor digiti minimi, on its radial side.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:37383") AnnotationAssertion(Annotation( "FMA:37383") "flexor digiti minimi brevis muscle of hand") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) Annotation( ) "musculus flexor digiti minimi brevis (manus)") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "flexor brevis minimi digiti muscle (hand)") AnnotationAssertion(Annotation( ) "flexor digiti minimi brevis muscle") AnnotationAssertion(Annotation( ) "flexor digiti quinti brevis muscle (hand)") AnnotationAssertion( "UBERON:0036174") AnnotationAssertion(rdfs:label "flexor digiti minimi brevis of hand") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (opponens digiti minimi of hand) AnnotationAssertion(Annotation( ) "The opponens minimi digiti (opponens digiti quinti in older texts) is a muscle in the hand. It is of a triangular form, and placed immediately beneath the palmaris brevis, abductor minimi digiti, and flexor brevis minimi digiti. It arises from the convexity of the hamulus of the hamate bone, and contiguous portion of the transverse carpal ligament; it is inserted into the whole length of the metacarpal bone of the little finger, along its ulnar margin.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:37384") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) Annotation( ) "musculus opponens digiti minimi (Manus)") AnnotationAssertion(Annotation( "FMA:37384") "opponens digiti minimi muscle of hand") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "opponens digiti minimi") AnnotationAssertion(Annotation( ) "opponens digiti minimi (hand)") AnnotationAssertion(Annotation( ) "opponens digiti quinti") AnnotationAssertion( "UBERON:0036176") AnnotationAssertion(rdfs:label "opponens digiti minimi of hand") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (nucleus recessus) AnnotationAssertion(Annotation( "BTO:0003662") Annotation( "ISSN:1505-0297") "The fish catecholamines originate in two large aggregations of neurons: the nucleus recessus lateralis (NRL) and the nucleus recessus posterioris (NRP). The nuclei were found in the hypothalamus of numerous species, e.g., the gold fish, eel, and roach.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0036177") AnnotationAssertion(rdfs:label "nucleus recessus") SubClassOf(Annotation( "BTO"^^xsd:string) ) # Class: (Sertoli cell barrier) AnnotationAssertion(Annotation( ) "The blood-testis barrier (abbreviated as BTB) is a physical barrier between the blood vessels and the seminiferous tubules of the animal testes. The barrier is formed by tight connections between the Sertoli cells, which are sustentacular cells (supporting cells) of the seminiferous tubules, and nourish the spermatogonia. The barrier prevents passage of cytotoxic agents (bodies or substances that are toxic to cells) into the seminiferous tubules.") AnnotationAssertion( ) AnnotationAssertion( "MESH:G06.535.166.330.100") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "blood testis barrier") AnnotationAssertion(Annotation( ) "blood-testes barrier") AnnotationAssertion( "UBERON:0036185") AnnotationAssertion(rdfs:label "Sertoli cell barrier") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (fibroelastic connective tissue) AnnotationAssertion( "FMA:83520") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0036186") AnnotationAssertion(rdfs:label "fibroelastic connective tissue") SubClassOf( ) SubClassOf( ) # Class: (intertragic incisure) AnnotationAssertion(Annotation( ) Annotation( ) Annotation( ) Annotation( "UBERON:cjm"^^xsd:string) "A surface structure that is the narrowed downward continuation of the conchal space bounded anteriorly by the borders of the tragus, posteriorly by theantitragus, and along its lower lateral margins and inferior boundary by the connection between the first two.") AnnotationAssertion(Annotation( ) "incisura") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:61175") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) Annotation( ) "incisura intertragica") AnnotationAssertion(Annotation( "FMA:61175") "intertragal incisure") AnnotationAssertion(Annotation( "FMA:61175") "intertragic incisure") AnnotationAssertion(Annotation( "FMA:61175") "intertragic notch") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "anterior auricular groove") AnnotationAssertion(Annotation( ) "auricular notch") AnnotationAssertion(Annotation( ) "incisura anterior auris") AnnotationAssertion(Annotation( ) "intertragic incisure") AnnotationAssertion(Annotation( ) "sulcus auriculae anterior") AnnotationAssertion( "UBERON:0036212") AnnotationAssertion(rdfs:comment "Measurement notes: The length is measured from the upper to the lower border (between tragus and antitragus)") AnnotationAssertion(rdfs:label "intertragic incisure") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (rectosigmoid junction) AnnotationAssertion(Annotation( ) Annotation( ) Annotation( "NCIT:C54188") "An anatomical junction that is between the sigmoid colon and rectum.") AnnotationAssertion( ) AnnotationAssertion( "NCIT:C54188") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "NCIT:C54188") "rectosigmoid region") AnnotationAssertion( "UBERON:0036214") AnnotationAssertion(rdfs:label "rectosigmoid junction") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (anatomical surface region) AnnotationAssertion(Annotation( ) "Material anatomical entity that forms the outermost boundary of an anatomical structure.") AnnotationAssertion( "AAO:0010270") AnnotationAssertion( "AEO:0000154") AnnotationAssertion( "ZFA:0005594") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0036215") AnnotationAssertion(rdfs:label "anatomical surface region") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (tympanic nerve) AnnotationAssertion(Annotation( ) "The tympanic nerve (nerve of Jacobson) is a branch of the glossopharyngeal nerve found near the ear.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:53480") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "jacobson%27s nerve") AnnotationAssertion(Annotation( ) "nerve of jacobson") AnnotationAssertion(Annotation( ) "tympanic") AnnotationAssertion(Annotation( ) "tympanic branch") AnnotationAssertion(Annotation( ) "tympanic branch of the glossopharyngeal") AnnotationAssertion( "UBERON:0036216") AnnotationAssertion(rdfs:label "tympanic nerve") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (coelomic fluid) AnnotationAssertion(Annotation( ) Annotation( ) "A bodily fluid that is located in the coelom.") AnnotationAssertion( "he coelomic fluid serves several functions; it acts as a hydroskeleton, it allows free movement and growth of internal organs, it serves for transport of gases, nutrients and waste products between different parts of the body, it allows storage of sperm and eggs during maturation and it acts as a reservoir for waste [Wikipedia:Coelom#Coelomic_fluid]") AnnotationAssertion( "BTO:0001708") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0036217") AnnotationAssertion(rdfs:label "coelomic fluid") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (secondary prosencephalon) AnnotationAssertion(Annotation( ) Annotation( ) "The most anterior region of the forebrain including both the telencephalon and the hypothalamus in the prosomeric model.") AnnotationAssertion( "DMBA:15567") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "DMBA:15567") Annotation( ) "SP") AnnotationAssertion( "UBERON:0036218") AnnotationAssertion(rdfs:comment "may contain the optic recess region (ORR) in the new model proposed by Yamamoto et al. 2017 (see https://www.ncbi.nlm.nih.gov/pubmed/28470718)") AnnotationAssertion(rdfs:label "secondary prosencephalon") SubClassOf(Annotation( "DMBA") ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (corticobulbar and corticospinal tracts) AnnotationAssertion(Annotation( ) "The corticobulbar and corticospinal tracts combined.") AnnotationAssertion(Annotation( ) Annotation( "BIRNLEX:1464") Annotation( "MP:0002878") Annotation( ) "pyramidal tract") AnnotationAssertion( ) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0036224") AnnotationAssertion(rdfs:label "corticobulbar and corticospinal tracts") SubClassOf( ) SubClassOf(Annotation( "NIFSTD"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (respiratory system gland) AnnotationAssertion(Annotation( "UBERON:cjm"^^xsd:string) "Any gland that is part os the respiratory system.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0036225") AnnotationAssertion(rdfs:label "respiratory system gland") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (vaginal fluid) AnnotationAssertion(Annotation( ) "Fluid that lines the vaginal walls that consists of multiple secretions that collect in the vagina from different glands.") AnnotationAssertion( "uberon") AnnotationAssertion( "vaginal discharge") AnnotationAssertion( "vaginal secretion") AnnotationAssertion( "UBERON:0036243") AnnotationAssertion(rdfs:label "vaginal fluid") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (secretion of serous membrane) AnnotationAssertion(Annotation( "FMA:20932") "A transudate found in the serous sac.") AnnotationAssertion(Annotation( "FMA:20932") "serous fluid") AnnotationAssertion( "FMA:20932") AnnotationAssertion( "serous sac fluid") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0036244") AnnotationAssertion(rdfs:label "secretion of serous membrane") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (parenchyma of mammary gland) AnnotationAssertion(Annotation( ) Annotation( ) Annotation( "BGEE:ann") "Parenchymal tissue that consists of the alveoli, grape-like clusters where milk is stored, and branching ducts, which are tubular canals carrying gladular secretions.") AnnotationAssertion( "lactiferous gland parenchyma") AnnotationAssertion( "mammary gland parenchyma") AnnotationAssertion( "parenchyma of lactiferous gland") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0036245") AnnotationAssertion(rdfs:label "parenchyma of mammary gland") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (incudostapedial joint) AnnotationAssertion(Annotation( ) Annotation( ) "The small synovial joint connecting the inclus and the stapes, located between the lenticular process on the long crus of the incus and the head of the stapes.") AnnotationAssertion( "FMA:60065") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) Annotation( ) "articulatio incudostapedialis") AnnotationAssertion(Annotation( "FMA:60065") "incudostapedial articulation") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0036246") AnnotationAssertion(rdfs:label "incudostapedial joint") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (incudomallear joint) AnnotationAssertion(Annotation( ) Annotation( ) "The saddle-shaped synovial joint connecting the incus and the malleus.") AnnotationAssertion( "FMA:60064") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) Annotation( ) "articulatio incudomallearis") AnnotationAssertion(Annotation( "FMA:60064") "incudomallear articulation") AnnotationAssertion(Annotation( "FMA:60064") "incudomalleolar joint") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0036247") AnnotationAssertion(rdfs:label "incudomallear joint") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (joint of auditory ossicle) AnnotationAssertion(Annotation( "UBERON:cjm"^^xsd:string) "Any synovial joint that connects auditory ossicles.") AnnotationAssertion( "FMA:60063") AnnotationAssertion( "auditory ossicle joint") AnnotationAssertion(Annotation( "FMA:60063") "auditory ossicles joint") AnnotationAssertion(Annotation( "FMA:60063") "joint of auditory ossicles") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0036248") AnnotationAssertion(rdfs:label "joint of auditory ossicle") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (zona pectinata of basilar membrane of cochlea) AnnotationAssertion(Annotation( ) Annotation( ) "The acellular membrane that forms the outer two thirds of the basilar membrane of the conchlea.") AnnotationAssertion( "pectinate zone") AnnotationAssertion( "zona pectinata") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:2529") AnnotationAssertion( "FMA:75710") AnnotationAssertion( "pectinate zone of basilar membrane") AnnotationAssertion( "pectinate zone of organ of corti") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0036249") AnnotationAssertion(rdfs:label "zona pectinata of basilar membrane of cochlea") SubClassOf( ) # Class: (zone of basilar membrane of cochlea) AnnotationAssertion( ) AnnotationAssertion( "uberon") AnnotationAssertion( "zone of organ of corti") AnnotationAssertion( "UBERON:0036250") AnnotationAssertion(rdfs:label "zone of basilar membrane of cochlea") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (interdigital space) AnnotationAssertion(Annotation( "NCIT:C106201") "The space between the digits of the hand or foot.") AnnotationAssertion( "NCIT:C106201") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0036252") AnnotationAssertion(rdfs:label "interdigital space") SubClassOf( ) SubClassOf( ObjectIntersectionOf(ObjectMinCardinality(2 ) ObjectMaxCardinality(2 ))) # Class: (orifice of skull) AnnotationAssertion( "FMA:53133") AnnotationAssertion(Annotation( "FMA:53133") "cranial orifice") AnnotationAssertion(Annotation( "FMA:53133") "skull orifice") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0036253") AnnotationAssertion(rdfs:label "orifice of skull") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (piriform aperture) AnnotationAssertion(Annotation( ) Annotation( ) Annotation( "MGI:anna"^^xsd:string) "A pear-shaped bony inlet comprising the most anterior and narrowest bony portion of the nasal airway.") AnnotationAssertion( ) AnnotationAssertion( "FMA:53137") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) Annotation( ) "apertura piriformis") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "apertura piriformis") AnnotationAssertion(Annotation( ) "piriform aperture") AnnotationAssertion(Annotation( ) "pyriform aperture") AnnotationAssertion( "UBERON:0036254") AnnotationAssertion(rdfs:label "piriform aperture") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (interoceptive system) AnnotationAssertion(Annotation( ) Annotation( ) "The system that is responsible for sensing the internal state of the body.") AnnotationAssertion( ) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0036255") AnnotationAssertion(rdfs:label "interoceptive system") SubClassOf( ) # Class: (iliac lymph sac) AnnotationAssertion(Annotation( ) Annotation( ) "An embryonic lymph sac that forms near the junction of the iliac veins with the posterior cardinal veins.") AnnotationAssertion( "NCIT:C34191") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0036256") AnnotationAssertion(rdfs:label "iliac lymph sac") SubClassOf(Annotation( "NCIT") ) # Class: (embryonic cisterna chyli) AnnotationAssertion(Annotation( ) Annotation( ) "An embryonic lymph sac that is dorsal to the retroperitoneal lymph sac, at the level of the adrenal glands.") AnnotationAssertion( "EHDAA2:0000253") AnnotationAssertion( "uberon") AnnotationAssertion( "future upper portion of the cisterna chyli") AnnotationAssertion( "UBERON:0036260") AnnotationAssertion(rdfs:label "embryonic cisterna chyli") SubClassOf(Annotation( "cjm"^^xsd:string) ) # Class: (uterine ligament) AnnotationAssertion(Annotation( "NCIT:C61360") "Any of the eight ligaments pertaining to the uterus including the anterior, posterior, lateral, sacro-uterine and round ligaments.") AnnotationAssertion( ) AnnotationAssertion( "NCIT:C61360") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0036262") AnnotationAssertion(rdfs:label "uterine ligament") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (supraglottic part of larynx) AnnotationAssertion(Annotation( "NCIT:C12279") "The upper part of the larynx, including the epiglottis; the area above the vocal cords.") AnnotationAssertion( ) AnnotationAssertion( "FMA:55476") AnnotationAssertion( "NCIT:C12279") AnnotationAssertion(Annotation( "FMA:55476") "supraglottic larynx") AnnotationAssertion(Annotation( "NCIT:C12279") "supraglottis") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0036263") AnnotationAssertion(rdfs:label "supraglottic part of larynx") SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (zygomaticotemporal nerve) AnnotationAssertion(Annotation( ) "The zygomaticotemporal nerve or zygomaticotemporal branch (temporal branch) is derived from the maxillary branch of the trigeminal nerve (Cranial nerve V). It runs along the lateral wall of the orbit in a groove in the zygomatic bone, receives a branch of communication from the lacrimal, and passes through zygomaticotemporal foramen in the zygomatic bone to enter the temporal fossa. It ascends between the bone, and substance of the Temporalis muscle, pierces the temporal fascia about 2.5 cm. above the zygomatic arch, and is distributed to the skin of the side of the forehead, and communicates with the facial nerve and with the auriculotemporal branch of the mandibular nerve. As it pierces the temporal fascia, it gives off a slender twig, which runs between the two layers of the fascia to the lateral angle of the orbit.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:52972") AnnotationAssertion(Annotation( "FMA:52972") "ramus zygomaticotemporalis (Nervus zygomaticus)") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) Annotation( ) "ramus zygomaticotemporalis nervus zygomatici") AnnotationAssertion(Annotation( "FMA:52972") "zygomaticotemporal branch of zygomatic nerve") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "zygomaticotemporal") AnnotationAssertion(Annotation( ) "zygomaticotemporal branch") AnnotationAssertion( "UBERON:0036264") AnnotationAssertion(rdfs:label "zygomaticotemporal nerve") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (conjunctival papilla) AnnotationAssertion( ) AnnotationAssertion(Annotation( ) "conjunctival papillae") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0036265") AnnotationAssertion(rdfs:label "conjunctival papilla") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pars interarticularis of vertebra) AnnotationAssertion(Annotation( ) "The part of vertebra located between the inferior and superior articular processes of the facet joint.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "pars interarticularis") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0036266") AnnotationAssertion(rdfs:label "pars interarticularis of vertebra") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (vulval vein) AnnotationAssertion( ) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0036267") AnnotationAssertion(rdfs:label "vulval vein") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pelvic vein) AnnotationAssertion( ) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0036268") AnnotationAssertion(rdfs:label "pelvic vein") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (penis blood vessel) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:30807") AnnotationAssertion( "uberon") AnnotationAssertion( "penis vasculature") AnnotationAssertion(Annotation( "EMAPA:30807") "vasculature of penis") AnnotationAssertion( "UBERON:0036269") AnnotationAssertion(rdfs:label "penis blood vessel") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (omphalopleure) AnnotationAssertion(Annotation( ) Annotation( ) Annotation( ) Annotation( "BGEE:ANiknejad") "A fetal membrane, part of the yolk sac, that appears during some placentation processes.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0036271") AnnotationAssertion(rdfs:label "omphalopleure") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (bilaminar omphalopleure) AnnotationAssertion(Annotation( ) Annotation( ) Annotation( ) Annotation( "BGEE:ANiknejad") "A non-vascular omphalopleure that supports uptake and metabolism of nutrients.") AnnotationAssertion( "non-vascular bilaminar omphalopleure") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0036272") AnnotationAssertion(rdfs:label "bilaminar omphalopleure") SubClassOf( ) # Class: (trilaminar omphalopleure) AnnotationAssertion(Annotation( ) Annotation( ) Annotation( ) Annotation( "BGEE:ANiknejad") "A vascular omphalopleure that is important for respiration.") AnnotationAssertion(Annotation( ) "choriovitelline membrane") AnnotationAssertion(Annotation( ) "vascular TOM") AnnotationAssertion(Annotation( ) "vascular trilaminar omphalopleure") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0036273") AnnotationAssertion(rdfs:label "trilaminar omphalopleure") SubClassOf( ) # Class: (tonsillar pillar) AnnotationAssertion(Annotation( "NCIT:C12236") "The anterior and posterior borders of the tonsillar fossa. They are composed of muscle tissue.") AnnotationAssertion( "NCIT:C12236") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0036274") AnnotationAssertion(rdfs:comment "Consider merge with palatopharyngeus") AnnotationAssertion(rdfs:label "tonsillar pillar") SubClassOf( ) SubClassOf(Annotation( "NCIT") ObjectSomeValuesFrom( )) # Class: (wall of left ventricle) AnnotationAssertion(Annotation( "FMA:9556") "Wall of ventricle which is continuous with the wall of aorta.") AnnotationAssertion( "FMA:9556") AnnotationAssertion(Annotation( "FMA:9556") "left ventricular wall") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0036285") AnnotationAssertion(rdfs:label "wall of left ventricle") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (wall of right ventricle) AnnotationAssertion(Annotation( "FMA:9533") "Wall of ventricle which is continuous with the wall of pulmonary trunk.") AnnotationAssertion( "FMA:9533") AnnotationAssertion(Annotation( "FMA:9533") "right ventricular wall") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0036286") AnnotationAssertion(rdfs:label "wall of right ventricle") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (anterior wall of left ventricle) AnnotationAssertion( "FMA:9560") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0036288") AnnotationAssertion(rdfs:label "anterior wall of left ventricle") SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (anterior wall of right ventricle) AnnotationAssertion(Annotation( "FMA:9553") "Region of wall of right ventricle which is continuous with the lateral and septal walls of right ventricle.") AnnotationAssertion( "FMA:9553") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0036289") AnnotationAssertion(rdfs:label "anterior wall of right ventricle") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (myocardium of anterior wall of left ventricle) AnnotationAssertion( "FMA:87177") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0036290") AnnotationAssertion(rdfs:label "myocardium of anterior wall of left ventricle") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (myocardium of anterior wall of right ventricle) AnnotationAssertion( "FMA:260877") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0036291") AnnotationAssertion(rdfs:label "myocardium of anterior wall of right ventricle") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (adnexa of uterus) AnnotationAssertion(Annotation( ) "The fallopian tubes and ovaries.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:265256") AnnotationAssertion(Annotation( "FMA:265256") "uterine adnexa") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "adnexa uteri") AnnotationAssertion( "UBERON:0036292") AnnotationAssertion(rdfs:label "adnexa of uterus") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (oral frenulum) AnnotationAssertion(Annotation( ) Annotation( "UBERON:cjm"^^xsd:string) "A small fold of mucous membrane in the mouth, connecting either the tongue or the lip to the mouth mucosa.") AnnotationAssertion( "frenulum") AnnotationAssertion( ) AnnotationAssertion(Annotation( "HP:0000190") Annotation( ) "oral frenula") AnnotationAssertion(Annotation( "HP:0000190") "oral frenulum") AnnotationAssertion( "uberon") AnnotationAssertion( "oral frenum") AnnotationAssertion( "UBERON:0036293") AnnotationAssertion(rdfs:label "oral frenulum") SubClassOf( ) # Class: (mucosa of lip) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A mucosa that is part of a lip region [Automatically generated definition].") AnnotationAssertion( "NCIT:C12226") AnnotationAssertion(Annotation( "UBERON:cjm"^^xsd:string) "labial mucosa") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0036294") AnnotationAssertion(rdfs:label "mucosa of lip") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (renal pelvis/ureter) AnnotationAssertion(Annotation( "NCIT:C54419") "The upper tract of the renal system. The renal pelvis is the large cavity in the middle of each kidney. Urine drains from each kidney through a long tube called the ureter, into the bladder, where it is stored until it is passed from the body through the urethra.") AnnotationAssertion( "NCIT:C54419") AnnotationAssertion( "renal pelvis and ureter") AnnotationAssertion( "renal pelvis plus ureter") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0036295") AnnotationAssertion(rdfs:label "renal pelvis/ureter") SubClassOf( ) SubClassOf(Annotation( "NCIT") ObjectSomeValuesFrom( )) # Class: (tributary of central retinal vein) AnnotationAssertion( ) AnnotationAssertion( "FMA:51892") AnnotationAssertion(Annotation( "FMA:51892") "central retinal venous tributary") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0036300") AnnotationAssertion(rdfs:label "tributary of central retinal vein") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (vasculature of spleen) AnnotationAssertion( ) AnnotationAssertion( "FMA:225251") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0036301") AnnotationAssertion(rdfs:label "vasculature of spleen") SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (vasculature of central nervous system plus retina) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0036302") AnnotationAssertion(rdfs:label "vasculature of central nervous system plus retina") SubClassOf( ) # Class: (vasculature of central nervous system) AnnotationAssertion( "FMA:259905") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0036303") AnnotationAssertion(rdfs:label "vasculature of central nervous system") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (anatomical border) AnnotationAssertion(Annotation( "UBERON:cjm"^^xsd:string) "An anatomical structure that is located along the line dividing two regions of an anatomical structure.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0036304") AnnotationAssertion(rdfs:label "anatomical border") SubClassOf( ) # Class: (wall of coronary artery) AnnotationAssertion( "FMA:14179") AnnotationAssertion(Annotation( "FMA:14179") "coronary arterial wall") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0036328") AnnotationAssertion(rdfs:label "wall of coronary artery") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (wall of appendix) AnnotationAssertion( "FMA:14621") AnnotationAssertion(Annotation( "FMA:14621") "appendix wall") AnnotationAssertion(Annotation( "FMA:14621") "wall of vermiform appendix") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0036337") AnnotationAssertion(rdfs:label "wall of appendix") SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (wall of gallbladder) AnnotationAssertion( "FMA:14657") AnnotationAssertion(Annotation( "FMA:14657") "gallbladder wall") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0036343") AnnotationAssertion(rdfs:label "wall of gallbladder") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (wall of brachiocephalic artery) AnnotationAssertion( "FMA:15089") AnnotationAssertion(Annotation( "FMA:15089") "brachiocephalic arterial wall") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0036351") AnnotationAssertion(rdfs:label "wall of brachiocephalic artery") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (wall of subclavian artery) AnnotationAssertion( "FMA:15090") AnnotationAssertion(Annotation( "FMA:15090") "subclavian arterial wall") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0036352") AnnotationAssertion(rdfs:label "wall of subclavian artery") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (wall of anal canal) AnnotationAssertion( "FMA:15704") AnnotationAssertion(Annotation( "FMA:15704") "anal canal wall") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0036362") AnnotationAssertion(rdfs:label "wall of anal canal") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (wall of right ureter) AnnotationAssertion( "FMA:15889") AnnotationAssertion(Annotation( "FMA:15889") "right ureteral wall") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0036375") AnnotationAssertion(rdfs:label "wall of right ureter") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (wall of left ureter) AnnotationAssertion( "FMA:15890") AnnotationAssertion(Annotation( "FMA:15890") "left ureteral wall") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0036376") AnnotationAssertion(rdfs:label "wall of left ureter") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (wall of pulmonary artery) AnnotationAssertion( "FMA:18211") AnnotationAssertion(Annotation( "FMA:18211") "pulmonary arterial wall") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0036422") AnnotationAssertion(rdfs:label "wall of pulmonary artery") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (wall of uterine tube) AnnotationAssertion( "FMA:18303") AnnotationAssertion(Annotation( "FMA:18303") "uterine tube wall") AnnotationAssertion(Annotation( "FMA:18303") "wall of fallopian tube") AnnotationAssertion(Annotation( "FMA:18303") "wall of oviduct") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0036441") AnnotationAssertion(rdfs:label "wall of uterine tube") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (wall of urethra) AnnotationAssertion( "FMA:19779") AnnotationAssertion(Annotation( "FMA:19779") "urethral wall") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0036521") AnnotationAssertion(rdfs:label "wall of urethra") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (wall of vagina) AnnotationAssertion( "FMA:19971") AnnotationAssertion(Annotation( "FMA:19971") "vaginal wall") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0036523") AnnotationAssertion(rdfs:label "wall of vagina") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (wall of synovial tendon sheath) AnnotationAssertion( "FMA:231590") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0036553") AnnotationAssertion(rdfs:label "wall of synovial tendon sheath") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (wall of lateral ventricle) AnnotationAssertion( "FMA:242772") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0036654") AnnotationAssertion(rdfs:label "wall of lateral ventricle") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (wall of cerebral aqueduct) AnnotationAssertion( "FMA:242774") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0036655") AnnotationAssertion(rdfs:label "wall of cerebral aqueduct") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (wall of third ventricle) AnnotationAssertion( "FMA:242776") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0036656") AnnotationAssertion(rdfs:label "wall of third ventricle") SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (wall of fourth ventricle) AnnotationAssertion( "FMA:242778") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0036657") AnnotationAssertion(rdfs:label "wall of fourth ventricle") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (wall of central canal of spinal cord) AnnotationAssertion( "FMA:242780") AnnotationAssertion(Annotation( "FMA:242780") "wall of central canal") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0036658") AnnotationAssertion(rdfs:label "wall of central canal of spinal cord") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (wall of ventricular system of brain) AnnotationAssertion( "FMA:242841") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0036661") AnnotationAssertion(rdfs:label "wall of ventricular system of brain") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (wall of eyeball) AnnotationAssertion( "FMA:58098") AnnotationAssertion(Annotation( "FMA:58098") "eyeball wall") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0036925") AnnotationAssertion(rdfs:label "wall of eyeball") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (wall of pharyngotympanic tube) AnnotationAssertion( "FMA:60069") AnnotationAssertion(Annotation( "FMA:60069") "pharyngotympanic tube wall") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0036990") AnnotationAssertion(rdfs:label "wall of pharyngotympanic tube") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (wall of orbit) AnnotationAssertion( "FMA:63144") AnnotationAssertion(Annotation( "FMA:63144") "orbit wall") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0037089") AnnotationAssertion(rdfs:label "wall of orbit") SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (wall of common carotid artery) AnnotationAssertion( "FMA:66284") AnnotationAssertion(Annotation( "FMA:66284") "common carotid arterial wall") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0037094") AnnotationAssertion(rdfs:label "wall of common carotid artery") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (wall of heart) AnnotationAssertion(Annotation( "FMA:7274") "Wall of organ which has as its parts the endocardium, myocardium , epicardium, and the cardiac septum, surrounded by the pericardial sac proper and is continuous with the walls of the systemic and pulmonary arterial and venous trees.") AnnotationAssertion( "FMA:7274") AnnotationAssertion(Annotation( "FMA:7274") "cardiac wall") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0037144") AnnotationAssertion(rdfs:label "wall of heart") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (wall of membranous labyrinth) AnnotationAssertion( "FMA:79837") AnnotationAssertion(Annotation( "FMA:79837") "membranous labyrinth wall") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0037191") AnnotationAssertion(rdfs:label "wall of membranous labyrinth") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (wall of lacrimal duct) AnnotationAssertion( "FMA:85375") AnnotationAssertion(Annotation( "FMA:85375") "lacrimal ductal wall") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0037237") AnnotationAssertion(rdfs:label "wall of lacrimal duct") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (wall of male urethra) AnnotationAssertion( "FMA:19676") AnnotationAssertion(Annotation( "FMA:19676") "male urethral wall") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0037447") AnnotationAssertion(rdfs:label "wall of male urethra") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (wall of female urethra) AnnotationAssertion( "FMA:19780") AnnotationAssertion(Annotation( "FMA:19780") "female urethral wall") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0037455") AnnotationAssertion(rdfs:label "wall of female urethra") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (hair of neck) AnnotationAssertion( "FMA:54242") AnnotationAssertion(Annotation( "FMA:54242") "neck hair") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0037458") AnnotationAssertion(rdfs:label "hair of neck") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (hair of limb) AnnotationAssertion( "FMA:54243") AnnotationAssertion(Annotation( "FMA:54243") "limb hair") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0037459") AnnotationAssertion(rdfs:label "hair of limb") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (primary hair) AnnotationAssertion(Annotation( ) "Very thin, soft, usually unpigmented, downy hair that is sometimes found on the body of a fetal or new-born human.") AnnotationAssertion( "FMA:70667") AnnotationAssertion(Annotation( "FMA:70667") "downy hair") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) Annotation( ) "lanugo") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0037461") AnnotationAssertion(rdfs:comment "It is replaced by hair covering the same surfaces, which is called vellus hair.") AnnotationAssertion(rdfs:label "primary hair") SubClassOf( ) # Class: (vellus hair) AnnotationAssertion(Annotation( ) "Short, thin, slight-colored, and barely noticeable hair that develops on most of a person's body during childhood.") AnnotationAssertion( "FMA:70668") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "peach fuzz") AnnotationAssertion( "UBERON:0037462") AnnotationAssertion(rdfs:comment "Vellus hair is differentiated from the more visible terminal or androgenic hair, which develops only during and after puberty, usually to a greater extent on men than it does on women.") AnnotationAssertion(rdfs:label "vellus hair") SubClassOf( ) DisjointClasses( ) # Class: (terminal hair) AnnotationAssertion(Annotation( ) "Thick and long hair, as compared with vellus hair growing elsewhere.") AnnotationAssertion( "FMA:70669") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0037463") AnnotationAssertion(rdfs:label "terminal hair") SubClassOf( ) # Class: (androgenic hair) AnnotationAssertion(Annotation( ) "The terminal hair that develops on the human body during and after puberty. It is differentiated from the head hair and less visible vellus hair, which is much finer and lighter in color.") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "body hair") AnnotationAssertion( "UBERON:0037464") AnnotationAssertion(rdfs:comment "The growth of androgenic hair is related to the level of androgens (often referred to as male hormones) and the density of androgen receptors in the dermal papillae. Both must reach a threshold for the proliferation of hair follicle cells") AnnotationAssertion(rdfs:label "androgenic hair") SubClassOf( ) # Class: (catagen hair) AnnotationAssertion( "FMA:70717") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0037465") AnnotationAssertion(rdfs:comment "TODO: axiomatize using GO") AnnotationAssertion(rdfs:label "catagen hair") SubClassOf( ) # Class: (telogen hair) AnnotationAssertion( "FMA:70718") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0037466") AnnotationAssertion(rdfs:comment "TODO: axiomatize using GO") AnnotationAssertion(rdfs:label "telogen hair") SubClassOf( ) # Class: (anagen hair) AnnotationAssertion( "FMA:70716") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0037467") AnnotationAssertion(rdfs:comment "TODO: axiomatize using GO") AnnotationAssertion(rdfs:label "anagen hair") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (waist) AnnotationAssertion(Annotation( ) Annotation( ) "The part of the human abdomen below the ribs and above the hips, often narrower than the areas above and below.") AnnotationAssertion( "FMA:228775") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0037468") AnnotationAssertion(rdfs:label "waist") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (supramammary lymph node) AnnotationAssertion( "FMA:12785") AnnotationAssertion(Annotation( "FMA:12785") "supramammary node") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0037480") AnnotationAssertion(rdfs:label "supramammary lymph node") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (paracardial gastric lymph node) AnnotationAssertion(Annotation( "FMA:12803") "Gastric lymph node located around the cardia of stomach.") AnnotationAssertion( "FMA:12803") AnnotationAssertion(Annotation( "FMA:12803") "aJCC level 16") AnnotationAssertion(Annotation( "FMA:12803") "lymph node ring of cardia of stomach") AnnotationAssertion(Annotation( "FMA:12803") "paracardial gastric node") AnnotationAssertion(Annotation( "FMA:12803") "paracardial lymph node") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0037494") AnnotationAssertion(rdfs:label "paracardial gastric lymph node") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (subscapular axillary lymph node) AnnotationAssertion(Annotation( ) "An axillary lymph node that is placed along the lower margin of the posterior wall of the axilla in the course of the subscapular artery.") AnnotationAssertion( "FMA:14187") AnnotationAssertion(Annotation( "FMA:14187") "nodus lymphaticus subscapularis axillae") AnnotationAssertion(Annotation( "FMA:14187") "posterior axillary node") AnnotationAssertion(Annotation( "FMA:14187") "subcapsular node") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0037500") AnnotationAssertion(rdfs:label "subscapular axillary lymph node") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (pectoral axillary lymph node) AnnotationAssertion(Annotation( ) "An axiallary lymph node along the lower border of the Pectoralis minor, in relation with the lateral thoracic artery. Their afferents drain the skin and muscles of the anterior and lateral thoracic walls, and the central and lateral parts of the mamma; their efferents pass partly to the central and partly to the subclavicular groups of axillary glands.") AnnotationAssertion( "FMA:14188") AnnotationAssertion(Annotation( ) Annotation( "FMA:14188") "anterior axillary lymph node") AnnotationAssertion(Annotation( "FMA:14188") "nodus lymphaticus pectoralis axillae") AnnotationAssertion(Annotation( "FMA:14188") "pectoral lymph node") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0037501") AnnotationAssertion(rdfs:label "pectoral axillary lymph node") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (central axillary lymph node) AnnotationAssertion(Annotation( ) "An axillary lymph node that is imbedded in the adipose tissue near the base of the axilla.") AnnotationAssertion( "FMA:14189") AnnotationAssertion(Annotation( "FMA:14189") "central node") AnnotationAssertion(Annotation( "FMA:14189") "nodus lymphaticus centralis axillae") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0037502") AnnotationAssertion(rdfs:label "central axillary lymph node") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (apical axillary lymph node) AnnotationAssertion(Annotation( ) "An axillary lymph node that is situated partly posterior to the upper portion of the Pectoralis minor and partly above the upper border of this muscle.") AnnotationAssertion( "FMA:14190") AnnotationAssertion(Annotation( "FMA:14190") "nodus lymphaticus apicalis axillae") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0037503") AnnotationAssertion(rdfs:label "apical axillary lymph node") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (intermediate mesenteric lymph node) AnnotationAssertion( "FMA:16609") AnnotationAssertion(Annotation( "FMA:16609") "central mesenteric lymph node") AnnotationAssertion(Annotation( "FMA:16609") "central superior mesenteric lymph node") AnnotationAssertion(Annotation( "FMA:16609") "intermediate lymph node of small intestine") AnnotationAssertion(Annotation( "FMA:16609") "intermediate mesenteric node") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0037514") AnnotationAssertion(rdfs:label "intermediate mesenteric lymph node") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (juxta-arterial mesenteric lymph node) AnnotationAssertion( "FMA:16610") AnnotationAssertion(Annotation( "FMA:16610") "juxta-arterial mesenteric node") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0037515") AnnotationAssertion(rdfs:label "juxta-arterial mesenteric lymph node") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (epicolic lymph node) AnnotationAssertion( "FMA:16613") AnnotationAssertion(Annotation( "FMA:16613") "epicolic node") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0037518") AnnotationAssertion(rdfs:label "epicolic lymph node") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (preterminal colic lymph node) AnnotationAssertion( "FMA:16616") AnnotationAssertion(Annotation( "FMA:16616") "preterminal colic node") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0037521") AnnotationAssertion(rdfs:label "preterminal colic lymph node") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (ileal lymph node) AnnotationAssertion( "FMA:16617") AnnotationAssertion(Annotation( "FMA:16617") "ileal mesentary lymph node") AnnotationAssertion(Annotation( "FMA:16617") "ileal node") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0037522") AnnotationAssertion(rdfs:label "ileal lymph node") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (superior pancreaticoduodenal lymph node) AnnotationAssertion( "FMA:16624") AnnotationAssertion(Annotation( "FMA:16624") "superior pancreaticoduodenal node") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0037527") AnnotationAssertion(rdfs:label "superior pancreaticoduodenal lymph node") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (inferior pancreaticoduodenal lymph node) AnnotationAssertion( "FMA:16625") AnnotationAssertion(Annotation( "FMA:16625") "inferior pancreaticoduodenal node") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0037528") AnnotationAssertion(rdfs:label "inferior pancreaticoduodenal lymph node") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (inferior pancreatic lymph node) AnnotationAssertion(Annotation( "FMA:16628") "Pancreaticosplenioc lymph node located along the inferior margin of pancreas.") AnnotationAssertion( "FMA:16628") AnnotationAssertion(Annotation( "FMA:16628") "inferior pancreatic node") AnnotationAssertion(Annotation( "FMA:16628") "inferior pancreatiosplenic lymph node") AnnotationAssertion(Annotation( "FMA:16628") "jPS 18 node") AnnotationAssertion(Annotation( "FMA:16628") "jPS no. 18 node") AnnotationAssertion(Annotation( "FMA:16628") "no. 18 pancreatic lymph node") AnnotationAssertion(Annotation( "FMA:16628") "no. 18 pancreaticoduodenal lymph node") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0037530") AnnotationAssertion(rdfs:label "inferior pancreatic lymph node") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (intestinal lymph node) AnnotationAssertion( "FMA:16629") AnnotationAssertion(Annotation( "FMA:16629") "intestinal node") AnnotationAssertion(Annotation( "FMA:16629") "visceral lumbar lymph node") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0037531") AnnotationAssertion(rdfs:label "intestinal lymph node") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (medial common iliac lymph node) AnnotationAssertion( "FMA:16641") AnnotationAssertion(Annotation( "FMA:16641") "medial common iliac node") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0037532") AnnotationAssertion(rdfs:label "medial common iliac lymph node") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (intermediate common iliac lymph node) AnnotationAssertion( "FMA:16642") AnnotationAssertion(Annotation( "FMA:16642") "intermediate common iliac node") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0037533") AnnotationAssertion(rdfs:label "intermediate common iliac lymph node") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (lateral common iliac lymph node) AnnotationAssertion( "FMA:16643") AnnotationAssertion(Annotation( "FMA:16643") "lateral common iliac node") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0037534") AnnotationAssertion(rdfs:label "lateral common iliac lymph node") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (subaortic common iliac lymph node) AnnotationAssertion( "FMA:16644") AnnotationAssertion(Annotation( "FMA:16644") "subaortic common iliac node") AnnotationAssertion(Annotation( "FMA:16644") "subaortic lymph node") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0037535") AnnotationAssertion(rdfs:label "subaortic common iliac lymph node") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (promontory lymph node) AnnotationAssertion( "FMA:16645") AnnotationAssertion(Annotation( "FMA:16645") "promontory node") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0037536") AnnotationAssertion(rdfs:label "promontory lymph node") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (medial external iliac lymph node) AnnotationAssertion( "FMA:16647") AnnotationAssertion(Annotation( "FMA:16647") "medial external iliac node") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0037538") AnnotationAssertion(rdfs:label "medial external iliac lymph node") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (intermediate external iliac lymph node) AnnotationAssertion( "FMA:16648") AnnotationAssertion(Annotation( "FMA:16648") "intermediate external iliac node") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0037539") AnnotationAssertion(rdfs:label "intermediate external iliac lymph node") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (lateral external iliac lymph node) AnnotationAssertion( "FMA:16649") AnnotationAssertion(Annotation( "FMA:16649") "lateral external iliac node") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0037540") AnnotationAssertion(rdfs:label "lateral external iliac lymph node") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (interiliac lymph node) AnnotationAssertion( "FMA:16651") AnnotationAssertion(Annotation( "FMA:16651") "interiliac node") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0037541") AnnotationAssertion(rdfs:label "interiliac lymph node") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (superior gluteal lymph node) AnnotationAssertion( "FMA:16658") AnnotationAssertion(Annotation( "FMA:16658") "superior gluteal node") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0037548") AnnotationAssertion(rdfs:label "superior gluteal lymph node") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (inferior gluteal lymph node) AnnotationAssertion( "FMA:16659") AnnotationAssertion(Annotation( "FMA:16659") "inferior gluteal node") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0037549") AnnotationAssertion(rdfs:label "inferior gluteal lymph node") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (anorectal lymph node) AnnotationAssertion( "FMA:16669") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0037559") AnnotationAssertion(rdfs:label "anorectal lymph node") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (superficial axillary lymph node) AnnotationAssertion( "FMA:12771") AnnotationAssertion(Annotation( "FMA:12771") "axillary node") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0037560") AnnotationAssertion(rdfs:label "superficial axillary lymph node") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (diaphragmatic lymph node) AnnotationAssertion( "FMA:12773") AnnotationAssertion(Annotation( "FMA:12773") "diaphragmatic node") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0037566") AnnotationAssertion(rdfs:label "diaphragmatic lymph node") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (left gastric lymph node) AnnotationAssertion(Annotation( "FMA:12797") "Gastric lymph node located along the lesser curvature of stomach.") AnnotationAssertion( "FMA:12797") AnnotationAssertion(Annotation( "FMA:12797") "aJCC level 17L node") AnnotationAssertion(Annotation( "FMA:12797") "left gastric node") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0037580") AnnotationAssertion(rdfs:label "left gastric lymph node") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (lateral axillary lymph node) AnnotationAssertion( "FMA:14186") AnnotationAssertion(Annotation( "FMA:14186") "brachial axillary node") AnnotationAssertion(Annotation( "FMA:14186") "humeral node") AnnotationAssertion(Annotation( "FMA:14186") "nodus lymphaticus brachialis axillae") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0037590") AnnotationAssertion(rdfs:label "lateral axillary lymph node") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (left parietal lumbar lymph node) AnnotationAssertion( "FMA:16602") AnnotationAssertion(Annotation( "FMA:16602") "left parietal lumbar node") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0037601") AnnotationAssertion(rdfs:label "left parietal lumbar lymph node") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (appendicular lymph node) AnnotationAssertion( "FMA:16620") AnnotationAssertion(Annotation( "FMA:16620") "appendicular node") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0037614") AnnotationAssertion(rdfs:label "appendicular lymph node") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (pararectal lymph node) AnnotationAssertion( "FMA:16621") AnnotationAssertion(Annotation( "FMA:16621") "pararectal node") AnnotationAssertion(Annotation( "FMA:16621") "perirectal lymph node") AnnotationAssertion(Annotation( "FMA:16621") "rectal lymph node") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0037615") AnnotationAssertion(rdfs:label "pararectal lymph node") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (right retropharyngeal lymph node) AnnotationAssertion( "FMA:224626") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0037722") AnnotationAssertion(rdfs:label "right retropharyngeal lymph node") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (left retropharyngeal lymph node) AnnotationAssertion( "FMA:224628") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0037723") AnnotationAssertion(rdfs:label "left retropharyngeal lymph node") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lateral superior deep cervical lymph node) AnnotationAssertion( "FMA:232351") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0037763") AnnotationAssertion(rdfs:label "lateral superior deep cervical lymph node") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (anterior superior deep cervical lymph node) AnnotationAssertion( "FMA:232355") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0037764") AnnotationAssertion(rdfs:label "anterior superior deep cervical lymph node") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (lateral inferior deep cervical lymph node) AnnotationAssertion( "FMA:232358") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0037765") AnnotationAssertion(rdfs:label "lateral inferior deep cervical lymph node") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (anterior inferior deep cervical lymph node) AnnotationAssertion( "FMA:232361") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0037766") AnnotationAssertion(rdfs:label "anterior inferior deep cervical lymph node") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (right occipital lymph node) AnnotationAssertion( "FMA:232552") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0037787") AnnotationAssertion(rdfs:label "right occipital lymph node") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (left occipital lymph node) AnnotationAssertion( "FMA:232554") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0037788") AnnotationAssertion(rdfs:label "left occipital lymph node") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (right apical axillary lymph node) AnnotationAssertion( "FMA:232558") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0037789") AnnotationAssertion(rdfs:label "right apical axillary lymph node") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (left apical axillary lymph node) AnnotationAssertion( "FMA:232560") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0037790") AnnotationAssertion(rdfs:label "left apical axillary lymph node") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (right subscapular axillary lymph node) AnnotationAssertion( "FMA:232566") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0037793") AnnotationAssertion(rdfs:label "right subscapular axillary lymph node") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (left subscapular axillary lymph node) AnnotationAssertion( "FMA:232568") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0037794") AnnotationAssertion(rdfs:label "left subscapular axillary lymph node") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (right pectoral axillary lymph node) AnnotationAssertion( "FMA:232570") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0037795") AnnotationAssertion(rdfs:label "right pectoral axillary lymph node") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (left pectoral axillary lymph node) AnnotationAssertion( "FMA:232572") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0037796") AnnotationAssertion(rdfs:label "left pectoral axillary lymph node") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (right central axillary lymph node) AnnotationAssertion( "FMA:232574") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0037797") AnnotationAssertion(rdfs:label "right central axillary lymph node") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (left central axillary lymph node) AnnotationAssertion( "FMA:232576") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0037798") AnnotationAssertion(rdfs:label "left central axillary lymph node") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (jugular lymph node) AnnotationAssertion( "FMA:232854") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0037865") AnnotationAssertion(rdfs:label "jugular lymph node") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (supramandibular lymph node) AnnotationAssertion( "FMA:234376") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0037995") AnnotationAssertion(rdfs:label "supramandibular lymph node") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (external jugular lymph node) AnnotationAssertion( "FMA:234382") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0037998") AnnotationAssertion(rdfs:label "external jugular lymph node") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (sternal lymph node) AnnotationAssertion( "FMA:234388") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0038001") AnnotationAssertion(rdfs:label "sternal lymph node") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (upper intercostal lymph node) AnnotationAssertion( "FMA:234390") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0038002") AnnotationAssertion(rdfs:label "upper intercostal lymph node") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (lower intercostal lymph node) AnnotationAssertion( "FMA:234392") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0038003") AnnotationAssertion(rdfs:label "lower intercostal lymph node") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (subclavian lymph node) AnnotationAssertion( "FMA:234498") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0038037") AnnotationAssertion(rdfs:label "subclavian lymph node") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (antebrachial lymph node) AnnotationAssertion( "FMA:234527") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0038048") AnnotationAssertion(rdfs:label "antebrachial lymph node") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (cardiophrenic angle lymph node) AnnotationAssertion( "FMA:265353") AnnotationAssertion(Annotation( "FMA:265353") "cardiophrenic angle node") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0038053") AnnotationAssertion(rdfs:label "cardiophrenic angle lymph node") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (retrocrural lymph node) AnnotationAssertion( "FMA:265356") AnnotationAssertion(Annotation( "FMA:265356") "retrocrural node") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0038054") AnnotationAssertion(rdfs:label "retrocrural lymph node") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (jejunal lymph node) AnnotationAssertion( "FMA:276784") AnnotationAssertion(Annotation( "FMA:276784") "jejunal mesentary lymph node") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0038093") AnnotationAssertion(rdfs:label "jejunal lymph node") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (inferior rectal lymph node) AnnotationAssertion( "FMA:276796") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0038094") AnnotationAssertion(rdfs:label "inferior rectal lymph node") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (medial diaphragmatic lymph node) AnnotationAssertion( "FMA:12807") AnnotationAssertion(Annotation( "FMA:12807") "medial diaphragmatic node") AnnotationAssertion(Annotation( "FMA:12807") "middle diaphragmatic lymph node") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0038124") AnnotationAssertion(rdfs:label "medial diaphragmatic lymph node") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (parietal pre-aortic lymph node) AnnotationAssertion( "FMA:16603") AnnotationAssertion(Annotation( "FMA:16603") "parietal pre-aortic node") AnnotationAssertion(Annotation( "FMA:16603") "parietal preaortic node") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0038137") AnnotationAssertion(rdfs:label "parietal pre-aortic lymph node") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (retro-aortic lymph node) AnnotationAssertion( "FMA:16607") AnnotationAssertion(Annotation( "FMA:16607") "post-aortic lymph node") AnnotationAssertion(Annotation( "FMA:16607") "postaortic lymph node") AnnotationAssertion(Annotation( "FMA:16607") "retro-aortic node") AnnotationAssertion(Annotation( "FMA:16607") "retroaortic lymph node") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0038139") AnnotationAssertion(rdfs:label "retro-aortic lymph node") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (paracardiac lymph node) AnnotationAssertion( "FMA:265350") AnnotationAssertion(Annotation( "FMA:265350") "paracardiac node") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0038587") AnnotationAssertion(rdfs:label "paracardiac lymph node") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (pericardial lymph node) AnnotationAssertion( "FMA:276807") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0038632") AnnotationAssertion(rdfs:label "pericardial lymph node") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (aortopulmonary lymph node) AnnotationAssertion( "FMA:276813") AnnotationAssertion(Annotation( "FMA:276813") "5 thoracic lymph node") AnnotationAssertion(Annotation( "FMA:276813") "aortopulmonary window lymph node") AnnotationAssertion(Annotation( "FMA:276813") "mediastinal lymph node station # 5") AnnotationAssertion(Annotation( "FMA:276813") "station 5 N2 lymph node") AnnotationAssertion(Annotation( "FMA:276813") "station 5 lymph node") AnnotationAssertion(Annotation( "FMA:276813") "subaortic lymph node") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0038633") AnnotationAssertion(rdfs:label "aortopulmonary lymph node") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (para-aortic thoracic lymph node) AnnotationAssertion( "FMA:276820") AnnotationAssertion(Annotation( "FMA:276820") "6 thoracic lymph node") AnnotationAssertion(Annotation( "FMA:276820") "pre-aortic No. 6 lymph node") AnnotationAssertion(Annotation( "FMA:276820") "station 6 N2 lymph node") AnnotationAssertion(Annotation( "FMA:276820") "station 6 lymph node") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0038634") AnnotationAssertion(rdfs:label "para-aortic thoracic lymph node") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (interlobar lymph node) AnnotationAssertion( "FMA:276828") AnnotationAssertion(Annotation( "FMA:276828") "11 R+L thoracic") AnnotationAssertion(Annotation( "FMA:276828") "11 thoracic lymph node") AnnotationAssertion(Annotation( "FMA:276828") "station 11 N1 lymph node") AnnotationAssertion(Annotation( "FMA:276828") "station 11 lymph node") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0038635") AnnotationAssertion(rdfs:label "interlobar lymph node") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (lobar lymph node) AnnotationAssertion( "FMA:276849") AnnotationAssertion(Annotation( "FMA:276849") "12R+L thoracic lymph node") AnnotationAssertion(Annotation( "FMA:276849") "station 12 N1 lymph node") AnnotationAssertion(Annotation( "FMA:276849") "station 12 lymph node") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0038638") AnnotationAssertion(rdfs:label "lobar lymph node") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (segmental lymph node) AnnotationAssertion( "FMA:276855") AnnotationAssertion(Annotation( "FMA:276855") "13R+L thoracic lymph node") AnnotationAssertion(Annotation( "FMA:276855") "station 13 N1 lymph node") AnnotationAssertion(Annotation( "FMA:276855") "station 13 lymph node") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0038641") AnnotationAssertion(rdfs:label "segmental lymph node") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (lymph node of inferior pulmonary ligament) AnnotationAssertion( "FMA:276867") AnnotationAssertion(Annotation( "FMA:276867") "9R+L thoracic lymph node") AnnotationAssertion(Annotation( "FMA:276867") "inferior pulmonary ligament lymph node") AnnotationAssertion(Annotation( "FMA:276867") "node of inferior pulmonary ligament") AnnotationAssertion(Annotation( "FMA:276867") "pulmonary ligament lymph node") AnnotationAssertion(Annotation( "FMA:276867") "station 9 N2 lymph node") AnnotationAssertion(Annotation( "FMA:276867") "station 9 lymph node") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0038647") AnnotationAssertion(rdfs:label "lymph node of inferior pulmonary ligament") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (superior mediastinal lymph node) AnnotationAssertion( "FMA:276903") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0038651") AnnotationAssertion(rdfs:label "superior mediastinal lymph node") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (superior left gastric lymph node) AnnotationAssertion(Annotation( "FMA:277061") "Left gastric lymph node located along the left gastric artery.") AnnotationAssertion( "FMA:277061") AnnotationAssertion(Annotation( "FMA:277061") "jPS 7 node") AnnotationAssertion(Annotation( "FMA:277061") "jPS no. 7 node") AnnotationAssertion(Annotation( "FMA:277061") "no. 7 left gastric lymph node") AnnotationAssertion(Annotation( "FMA:277061") "superior left gastric node") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0038684") AnnotationAssertion(rdfs:label "superior left gastric lymph node") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (inferior left gastric lymph node) AnnotationAssertion(Annotation( "FMA:277064") "Left gastric lymph node located along the cardiac half of the lesser curvature of stomach in the lesser omentum.") AnnotationAssertion( "FMA:277064") AnnotationAssertion(Annotation( "FMA:277064") "inferior left gastric node") AnnotationAssertion(Annotation( "FMA:277064") "jPS 3 node") AnnotationAssertion(Annotation( "FMA:277064") "jPS No. 3 node") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0038685") AnnotationAssertion(rdfs:label "inferior left gastric lymph node") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (visceral lymph node of abdomen) AnnotationAssertion( "FMA:277227") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0038687") AnnotationAssertion(rdfs:label "visceral lymph node of abdomen") SubClassOf( ) # Class: (common hepatic lymph node) AnnotationAssertion(Annotation( "FMA:277259") "Hepatic lymph node located along the common hepatic artery.") AnnotationAssertion( "FMA:277259") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0038691") AnnotationAssertion(rdfs:label "common hepatic lymph node") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (hepatoportal lymph node) AnnotationAssertion(Annotation( "FMA:277271") "Hepatic lymph node located along the portal vein.") AnnotationAssertion( "FMA:277271") AnnotationAssertion(Annotation( "FMA:277271") "jPS 12p node") AnnotationAssertion(Annotation( "FMA:277271") "jPS No. 12p node") AnnotationAssertion(Annotation( "FMA:277271") "no. 12p hepatic lymph node") AnnotationAssertion(Annotation( "FMA:277271") "periportal lymph node") AnnotationAssertion(Annotation( "FMA:277271") "porta hepatis lymph node") AnnotationAssertion(Annotation( "FMA:277271") "portahepatic lymph node") AnnotationAssertion(Annotation( "FMA:277271") "portal lymph node") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0038694") AnnotationAssertion(rdfs:label "hepatoportal lymph node") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (proximal superior pancreatic lymph node) AnnotationAssertion(Annotation( "FMA:277295") "Superior pancreatic lymph node located along the proximal segment of splenic artery.") AnnotationAssertion( "FMA:277295") AnnotationAssertion(Annotation( "FMA:277295") "jPS 11p node") AnnotationAssertion(Annotation( "FMA:277295") "jPS no. 11p node") AnnotationAssertion(Annotation( "FMA:277295") "no. 11p superior pancreatic lymph node") AnnotationAssertion(Annotation( "FMA:277295") "proximal superior pancreaticosplenic lymph node") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0038695") AnnotationAssertion(rdfs:label "proximal superior pancreatic lymph node") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (distal superior pancreatic lymph node) AnnotationAssertion(Annotation( "FMA:277298") "Superior pancreatic lymph node located along the distal segment of splenic artery.") AnnotationAssertion( "FMA:277298") AnnotationAssertion(Annotation( "FMA:277298") "distal superior pancreaticosplenic lymph node") AnnotationAssertion(Annotation( "FMA:277298") "jPS 11d node") AnnotationAssertion(Annotation( "FMA:277298") "jPS no. 11d node") AnnotationAssertion(Annotation( "FMA:277298") "no. 11d superior pancreatic lymph node") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0038696") AnnotationAssertion(rdfs:label "distal superior pancreatic lymph node") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (anterior superior pancreaticoduodenal lymph node) AnnotationAssertion(Annotation( "FMA:277305") "Superior pancreaticoduodenal lymph node located on the anterior anterior of superior region of head of pancreas.") AnnotationAssertion( "FMA:277305") AnnotationAssertion(Annotation( "FMA:277305") "anterosuperior pancreaticoduodenal lymph node") AnnotationAssertion(Annotation( "FMA:277305") "jPS 17a node") AnnotationAssertion(Annotation( "FMA:277305") "jPS no. 17a node") AnnotationAssertion(Annotation( "FMA:277305") "no. 17a pancreaticoduodenal lymph node") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0038697") AnnotationAssertion(rdfs:label "anterior superior pancreaticoduodenal lymph node") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (posterior superior pancreaticoduodenal lymph node) AnnotationAssertion(Annotation( "FMA:277310") "Superior pancreaticoduodenal lymph node located on the posterior aspect of superior portion of head of pancreas.") AnnotationAssertion( "FMA:277310") AnnotationAssertion(Annotation( "FMA:277310") "jPS 13a node") AnnotationAssertion(Annotation( "FMA:277310") "jPS no. 13a node") AnnotationAssertion(Annotation( "FMA:277310") "no. 13a pancreaticoduodenal lymph node") AnnotationAssertion(Annotation( "FMA:277310") "posterosuperior pancreaticoduodenal lymph node") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0038698") AnnotationAssertion(rdfs:label "posterior superior pancreaticoduodenal lymph node") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (anterior inferior pancreaticoduodenal lymph node) AnnotationAssertion(Annotation( "FMA:277315") "Inferior pancreaticoduodenal lymph node located on the anterior aspect of inferior region of head of pancreas.") AnnotationAssertion( "FMA:277315") AnnotationAssertion(Annotation( "FMA:277315") "anteroinferior pancreaticoduodenal lymph node") AnnotationAssertion(Annotation( "FMA:277315") "jPS 17b node") AnnotationAssertion(Annotation( "FMA:277315") "jPS no. 17b node") AnnotationAssertion(Annotation( "FMA:277315") "no. 17b pancreaticoduodenal lymph node") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0038699") AnnotationAssertion(rdfs:label "anterior inferior pancreaticoduodenal lymph node") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (posterior inferior pancreaticoduodenal lymph node) AnnotationAssertion(Annotation( "FMA:277317") "Inferior pancreaticoduodenal lymph node located on the posterior aspect of inferior region of head of pancreas.") AnnotationAssertion( "FMA:277317") AnnotationAssertion(Annotation( "FMA:277317") "jPS 13b node") AnnotationAssertion(Annotation( "FMA:277317") "jPS no. 13b node") AnnotationAssertion(Annotation( "FMA:277317") "no. 13b pancreaticoduodenal lymph node") AnnotationAssertion(Annotation( "FMA:277317") "posteroinferior pancreaticoduodenal lymph node") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0038700") AnnotationAssertion(rdfs:label "posterior inferior pancreaticoduodenal lymph node") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (anterior pancreaticoduodenal lymph node) AnnotationAssertion( "FMA:277368") AnnotationAssertion(Annotation( "FMA:277368") "jPS 17 node") AnnotationAssertion(Annotation( "FMA:277368") "no. 17 pancreaticoduodenal lymph node") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0038707") AnnotationAssertion(rdfs:label "anterior pancreaticoduodenal lymph node") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (juxta-intestinal mesenteric lymph node) AnnotationAssertion( "FMA:277581") AnnotationAssertion(Annotation( "FMA:277581") "mural mesenteric lymph node") AnnotationAssertion(Annotation( "FMA:277581") "para-intestinal mesenteric lymph node") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0038727") AnnotationAssertion(rdfs:label "juxta-intestinal mesenteric lymph node") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (visceral pre-aortic lymph node) AnnotationAssertion(Annotation( "FMA:277610") "Intestinal lymph node located anterior to aorta.") AnnotationAssertion( "FMA:277610") AnnotationAssertion(Annotation( "FMA:277610") "visceral para-aortic lymph node") AnnotationAssertion(Annotation( "FMA:277610") "visceral pre-aortic node") AnnotationAssertion(Annotation( "FMA:277610") "visceral preaortic lymph node") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0038734") AnnotationAssertion(rdfs:label "visceral pre-aortic lymph node") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (juxta-arterial jejunal lymph node) AnnotationAssertion( "FMA:277614") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0038735") AnnotationAssertion(rdfs:label "juxta-arterial jejunal lymph node") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (juxta-arterial ileal lymph node) AnnotationAssertion( "FMA:277616") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0038736") AnnotationAssertion(rdfs:label "juxta-arterial ileal lymph node") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (intermediate jejunal lymph node) AnnotationAssertion( "FMA:277618") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0038737") AnnotationAssertion(rdfs:label "intermediate jejunal lymph node") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (intermediate ileal lymph node) AnnotationAssertion( "FMA:277620") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0038738") AnnotationAssertion(rdfs:label "intermediate ileal lymph node") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (gastro-epiploic lymph node) AnnotationAssertion(Annotation( "FMA:277652") "Gastric lymph node located along the greater curvature of stomach.") AnnotationAssertion( "FMA:277652") AnnotationAssertion(Annotation( "FMA:277652") "gastro-epiploic node") AnnotationAssertion(Annotation( "FMA:277652") "gastro-omental lymph node") AnnotationAssertion(Annotation( "FMA:277652") "gastro-omental node") AnnotationAssertion(Annotation( "FMA:277652") "jPS 4 node") AnnotationAssertion(Annotation( "FMA:277652") "jPS No. 4 node") AnnotationAssertion(Annotation( "FMA:277652") "lymph node of greater curvature of stomach") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0038746") AnnotationAssertion(rdfs:label "gastro-epiploic lymph node") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (pararectal lymph node of pelvis) AnnotationAssertion( "FMA:278181") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0038784") AnnotationAssertion(rdfs:label "pararectal lymph node of pelvis") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (superior ileocolic lymph node) AnnotationAssertion( "FMA:278188") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0038787") AnnotationAssertion(rdfs:label "superior ileocolic lymph node") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (lymph node along bile duct) AnnotationAssertion( "FMA:281309") AnnotationAssertion(Annotation( "FMA:281309") "biliary lymph node") AnnotationAssertion(Annotation( "FMA:281309") "jPS 12b node") AnnotationAssertion(Annotation( "FMA:281309") "jPS No. 12b node") AnnotationAssertion(Annotation( "FMA:281309") "no. 12b hepatic lymph node") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0038796") AnnotationAssertion(rdfs:label "lymph node along bile duct") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (posterior ancreaticoduodenal lymph node) AnnotationAssertion( "FMA:304577") AnnotationAssertion(Annotation( "FMA:304577") "jPS 13 node") AnnotationAssertion(Annotation( "FMA:304577") "no. 13 pancreaticoduodenal lymph node") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0038818") AnnotationAssertion(rdfs:label "posterior ancreaticoduodenal lymph node") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (craniocervical lymph node) AnnotationAssertion(Annotation( "FMA:321555") "Lymph node located in either head and neck region.") AnnotationAssertion( "FMA:321555") AnnotationAssertion(Annotation( "FMA:321555") "head and neck lymph node") AnnotationAssertion(Annotation( "FMA:321555") "lymph node of head and neck") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0038849") AnnotationAssertion(rdfs:label "craniocervical lymph node") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (superficial popliteal lymph node) AnnotationAssertion( "FMA:44231") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0038853") AnnotationAssertion(rdfs:label "superficial popliteal lymph node") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (deep popliteal lymph node) AnnotationAssertion( "FMA:44232") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0038854") AnnotationAssertion(rdfs:label "deep popliteal lymph node") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (superior medial inguinal lymph node) AnnotationAssertion( "FMA:44297") AnnotationAssertion(Annotation( "FMA:44297") "superomedial node") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0038855") AnnotationAssertion(rdfs:label "superior medial inguinal lymph node") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (superior lateral inguinal lymph node) AnnotationAssertion( "FMA:44301") AnnotationAssertion(Annotation( "FMA:44301") "superolateral node") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0038856") AnnotationAssertion(rdfs:label "superior lateral inguinal lymph node") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (inferior inguinal lymph node) AnnotationAssertion( "FMA:44302") AnnotationAssertion(Annotation( "FMA:44302") "inferior inguinal node") AnnotationAssertion(Annotation( "FMA:44302") "subinguinal lymph node") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0038857") AnnotationAssertion(rdfs:label "inferior inguinal lymph node") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (intermediate deep inguinal lymph node) AnnotationAssertion( "FMA:44304") AnnotationAssertion(Annotation( "FMA:44304") "cloquet's gland") AnnotationAssertion(Annotation( "FMA:44304") "cloquet's node") AnnotationAssertion(Annotation( "FMA:44304") "intermediate deep inguinal node") AnnotationAssertion(Annotation( "FMA:44304") "intermediate inguinal lymph node") AnnotationAssertion(Annotation( "FMA:44304") "middle inguinal node") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) Annotation( ) "nodus inguinales profundi intermedius") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) Annotation( ) "nodus lymphoideus inguinales profundi intermedius") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0038859") AnnotationAssertion(rdfs:label "intermediate deep inguinal lymph node") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (distal deep inguinal lymph node) AnnotationAssertion( "FMA:44305") AnnotationAssertion(Annotation( "FMA:44305") "distal deep inguinal node") AnnotationAssertion(Annotation( "FMA:44305") "distal inguinal lymph node") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) Annotation( ) "nodus inguinales profundi distalis") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) Annotation( ) "nodus lymphoideus inguinales profundi distalis") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0038860") AnnotationAssertion(rdfs:label "distal deep inguinal lymph node") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (tibial lymph node) AnnotationAssertion( "FMA:44306") AnnotationAssertion(Annotation( "FMA:44306") "tIbial node") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0038861") AnnotationAssertion(rdfs:label "tibial lymph node") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (fibular lymph node) AnnotationAssertion( "FMA:44309") AnnotationAssertion(Annotation( "FMA:44309") "fibular node") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) Annotation( ) "nodus fibularis") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) Annotation( ) "nodus lymphoideus fibularis") AnnotationAssertion(Annotation( "FMA:44309") "peroneal lymph node") AnnotationAssertion(Annotation( "FMA:44309") "peroneal node") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0038864") AnnotationAssertion(rdfs:label "fibular lymph node") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (interpectoral lymph node) AnnotationAssertion( "FMA:44312") AnnotationAssertion(Annotation( "FMA:44312") "interpectoral node") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0038867") AnnotationAssertion(rdfs:label "interpectoral lymph node") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (paramammary lymph node) AnnotationAssertion( "FMA:44313") AnnotationAssertion(Annotation( "FMA:44313") "paramammary node") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0038868") AnnotationAssertion(rdfs:label "paramammary lymph node") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (cubital lymph node) AnnotationAssertion( "FMA:44315") AnnotationAssertion(Annotation( "FMA:44315") "cubital node") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0038870") AnnotationAssertion(rdfs:label "cubital lymph node") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (supratrochlear lymph node) AnnotationAssertion( "FMA:44316") AnnotationAssertion(Annotation( "FMA:44316") "supra-epicondylar lymph node") AnnotationAssertion(Annotation( "FMA:44316") "supratrochlear node") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0038871") AnnotationAssertion(rdfs:label "supratrochlear lymph node") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (lateral diaphragmatic lymph node) AnnotationAssertion( "FMA:5935") AnnotationAssertion(Annotation( "FMA:5935") "lateral diaphragmatic node") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0038878") AnnotationAssertion(rdfs:label "lateral diaphragmatic lymph node") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (anterior diaphragmatic lymph node) AnnotationAssertion( "FMA:5936") AnnotationAssertion(Annotation( "FMA:5936") "anterior diaphragmatic node") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0038879") AnnotationAssertion(rdfs:label "anterior diaphragmatic lymph node") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (posterior diaphragmatic lymph node) AnnotationAssertion( "FMA:5941") AnnotationAssertion(Annotation( "FMA:5941") "posterior diaphragmatic node") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0038882") AnnotationAssertion(rdfs:label "posterior diaphragmatic lymph node") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (brachiocephalic lymph node) AnnotationAssertion( "FMA:5944") AnnotationAssertion(Annotation( "FMA:5944") "brachiocephalic node") AnnotationAssertion(Annotation( "FMA:5944") "innominate lymph node") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0038885") AnnotationAssertion(rdfs:label "brachiocephalic lymph node") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (posterior mediastinal lymph node) AnnotationAssertion( "FMA:5947") AnnotationAssertion(Annotation( "FMA:5947") "nodus mediastinale posteriore lymphaticus") AnnotationAssertion(Annotation( "FMA:5947") "posterior mediastinal node") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0038888") AnnotationAssertion(rdfs:label "posterior mediastinal lymph node") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (paratracheal lymph node) AnnotationAssertion( "FMA:5953") AnnotationAssertion(Annotation( "FMA:5953") "cervical paratracheal lymph node") AnnotationAssertion(Annotation( "FMA:5953") "nodus paratracheale lymphaticus") AnnotationAssertion(Annotation( "FMA:5953") "paratracheal node") AnnotationAssertion(Annotation( "FMA:5953") "tracheal lymph node") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0038894") AnnotationAssertion(rdfs:label "paratracheal lymph node") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (superior tracheobronchial lymph node) AnnotationAssertion( "FMA:5959") AnnotationAssertion(Annotation( "FMA:5959") "4 thoracic lymph node") AnnotationAssertion(Annotation( "FMA:5959") "4R+L thoracic lymph node") AnnotationAssertion(Annotation( "FMA:5959") "lower paratracheal lymph node") AnnotationAssertion(Annotation( "FMA:5959") "nodus tracheobronchiale superiore lymphaticus") AnnotationAssertion(Annotation( "FMA:5959") "station 4 N2 lymph node") AnnotationAssertion(Annotation( "FMA:5959") "station 4 lymph node") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0038897") AnnotationAssertion(rdfs:label "superior tracheobronchial lymph node") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (inferior tracheobronchial lymph node) AnnotationAssertion( "FMA:5962") AnnotationAssertion(Annotation( "FMA:5962") "carinate lymph node") AnnotationAssertion(Annotation( "FMA:5962") "nodus tracheobronchialis inferioris lymphaticus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0038900") AnnotationAssertion(rdfs:label "inferior tracheobronchial lymph node") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (buccinator lymph node) AnnotationAssertion( "FMA:61223") AnnotationAssertion(Annotation( "FMA:61223") "buccinator node") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) Annotation( ) "nodus buccinatorius") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) Annotation( ) "nodus lymphoideus buccinatorius") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0038920") AnnotationAssertion(rdfs:label "buccinator lymph node") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (nasolabial lymph node) AnnotationAssertion( "FMA:61225") AnnotationAssertion(Annotation( "FMA:61225") "nasolabial node") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) Annotation( ) "nodus lymphoideus nasolabialis") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) Annotation( ) "nodus nasolabialis") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0038922") AnnotationAssertion(rdfs:label "nasolabial lymph node") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (malar lymph node) AnnotationAssertion( "FMA:61226") AnnotationAssertion(Annotation( "FMA:61226") "malar node") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) Annotation( ) "nodus lymphoideus malaris") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) Annotation( ) "nodus malaris") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0038923") AnnotationAssertion(rdfs:label "malar lymph node") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (lingual lymph node) AnnotationAssertion( "FMA:61228") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0038925") AnnotationAssertion(rdfs:label "lingual lymph node") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (infrahyoid lymph node) AnnotationAssertion( "FMA:61233") AnnotationAssertion(Annotation( "FMA:61233") "infrahyoid node") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0038929") AnnotationAssertion(rdfs:label "infrahyoid lymph node") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (prelaryngeal lymph node) AnnotationAssertion( "FMA:61234") AnnotationAssertion(Annotation( "FMA:61234") "prelaryngeal node") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0038930") AnnotationAssertion(rdfs:label "prelaryngeal lymph node") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (thyroid lymph node) AnnotationAssertion( "FMA:61235") AnnotationAssertion(Annotation( "FMA:61235") "thyroid node") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0038931") AnnotationAssertion(rdfs:label "thyroid lymph node") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (pretracheal lymph node) AnnotationAssertion( "FMA:61236") AnnotationAssertion(Annotation( "FMA:61236") "pretracheal node") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0038932") AnnotationAssertion(rdfs:label "pretracheal lymph node") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (superior deep lateral cervical lymph node) AnnotationAssertion( "FMA:61238") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0038934") AnnotationAssertion(rdfs:label "superior deep lateral cervical lymph node") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (inferior deep lateral cervical lymph node) AnnotationAssertion( "FMA:61239") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0038935") AnnotationAssertion(rdfs:label "inferior deep lateral cervical lymph node") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (jugulodigastric lymph node) AnnotationAssertion( "FMA:61240") AnnotationAssertion(Annotation( "FMA:61240") "jugulodigastric node") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) Annotation( ) "nodus jugulodigastricus") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) Annotation( ) "nodus lymphoideus jugulodigastricus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0038936") AnnotationAssertion(rdfs:label "jugulodigastric lymph node") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (accessory cervical lymph node) AnnotationAssertion( "FMA:61242") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0038938") AnnotationAssertion(rdfs:label "accessory cervical lymph node") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (superior diaphragmatic lymph node) AnnotationAssertion( "FMA:66167") AnnotationAssertion(Annotation( "FMA:66167") "superior diaphragmatic node") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0038943") AnnotationAssertion(rdfs:label "superior diaphragmatic lymph node") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (suprapyloric lymph node) AnnotationAssertion(Annotation( "FMA:66183") "Pylorioc lymph node located near the bifurcation of gastroduodenal artery and superior to the pylorus.") AnnotationAssertion( "FMA:66183") AnnotationAssertion(Annotation( "FMA:66183") "jPS 5 node") AnnotationAssertion(Annotation( "FMA:66183") "jPS no.5 node") AnnotationAssertion(Annotation( "FMA:66183") "no. 5 station pyloric lymph node") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) Annotation( ) "nodus lymphoideus suprapyloricus") AnnotationAssertion(Annotation( "FMA:TA"^^xsd:string) Annotation( ) "nodus suprapyloricus") AnnotationAssertion(Annotation( "FMA:66183") "suprapyloric node") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0038951") AnnotationAssertion(rdfs:label "suprapyloric lymph node") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (subpyloric lymph node) AnnotationAssertion(Annotation( "FMA:66184") "Pylorioc lymph node located in the angle between the superior and descending parts of duodenum.") AnnotationAssertion( "FMA:66184") AnnotationAssertion(Annotation( "FMA:66184") "infrapyloric lymph node") AnnotationAssertion(Annotation( "FMA:66184") "infrapyloric node") AnnotationAssertion(Annotation( "FMA:66184") "jPS 6 node") AnnotationAssertion(Annotation( "FMA:66184") "jPS no. 6 node") AnnotationAssertion(Annotation( "FMA:66184") "no. 6 station pyloric lymph node") AnnotationAssertion(Annotation( "FMA:66184") "subpyloric node") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0038952") AnnotationAssertion(rdfs:label "subpyloric lymph node") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (retropyloric lymph node) AnnotationAssertion( "FMA:66185") AnnotationAssertion(Annotation( "FMA:66185") "retropyloric node") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0038953") AnnotationAssertion(rdfs:label "retropyloric lymph node") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (inferior ileocolic lymph node) AnnotationAssertion( "FMA:78731") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0039162") AnnotationAssertion(rdfs:label "inferior ileocolic lymph node") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (lateral sacral lymph node) AnnotationAssertion( "FMA:84597") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0039163") AnnotationAssertion(rdfs:label "lateral sacral lymph node") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (medial sacral lymph node) AnnotationAssertion( "FMA:84598") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0039164") AnnotationAssertion(rdfs:label "medial sacral lymph node") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (bronchopulmonary lymph node) AnnotationAssertion(Annotation( ) Annotation( ) "A tracheobronchial lymph node situated in the hilum of a lung.") AnnotationAssertion( "FMA:5965") AnnotationAssertion(Annotation( "FMA:5965") "10 R+L thoracic") AnnotationAssertion(Annotation( "FMA:5965") "bronchopulmonary node") AnnotationAssertion(Annotation( "FMA:5965") "hilar lymph node") AnnotationAssertion(Annotation( "FMA:5965") "station 10 N1 lymph node") AnnotationAssertion(Annotation( "FMA:5965") "station 10 lymph node") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0039167") AnnotationAssertion(rdfs:label "bronchopulmonary lymph node") SubClassOf( ) # Class: (colic lymph node) AnnotationAssertion( ) AnnotationAssertion( "FMA:16612") AnnotationAssertion(Annotation( "FMA:16612") "colic node") AnnotationAssertion(Annotation( "FMA:16612") "pericolic lymph node") AnnotationAssertion(Annotation( "FMA:16612") "pericolonic lymph node") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0039168") AnnotationAssertion(rdfs:label "colic lymph node") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (anterior intercostal artery) AnnotationAssertion( "FMA:10641") AnnotationAssertion(Annotation( "FMA:10641") "intercostal branch of internal thoracic artery") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0039169") AnnotationAssertion(rdfs:label "anterior intercostal artery") SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (mammary branch of internal thoracic artery) AnnotationAssertion( "FMA:10648") AnnotationAssertion(Annotation( "FMA:10648") "medial mammary branch of perforating branch of internal thoracic artery") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0039170") AnnotationAssertion(rdfs:label "mammary branch of internal thoracic artery") SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (accessory vertebral vein) AnnotationAssertion(Annotation( ) "A lower continuation of the vertebral vein and vertebral venous plexus that passes through the foramen of the transverse process of the 7th cervical vertebra and empties into the brachiocephalic vein.") AnnotationAssertion( "FMA:14290") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0039185") AnnotationAssertion(rdfs:label "accessory vertebral vein") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (anterior vertebral vein) AnnotationAssertion(Annotation( ) "A vein that commences in a plexus around the transverse processes of the upper cervical vertebræ, descends in company with the ascending cervical artery between the Scalenus anterior and Longus capitis muscles, and opens into the terminal part of the vertebral vein.") AnnotationAssertion( "FMA:14296") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0039186") AnnotationAssertion(rdfs:label "anterior vertebral vein") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (suprascapular vein) AnnotationAssertion(Annotation( ) "The suprascapular vein is a vein running above the scapula. It empties into the external jugular vein.") AnnotationAssertion( "FMA:14319") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0039187") AnnotationAssertion(rdfs:label "suprascapular vein") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (superior laryngeal vein) AnnotationAssertion(Annotation( ) "The superior laryngeal vein is a vein which drains the larynx into the superior thyroid vein.") AnnotationAssertion( "FMA:14324") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0039188") AnnotationAssertion(rdfs:label "superior laryngeal vein") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (appendicular artery) AnnotationAssertion(Annotation( ) "An artery that commonly arises from the terminal branch of the ileocolic artery, or less commonly from the posterior cecal artery or an ileal artery.[1][2] It descends behind the termination of the ileum and enters the mesoappendix of the vermiform appendix. It runs near the free margin of the mesoappendix and ends in branches which supply the appendix.") AnnotationAssertion( "FMA:14818") AnnotationAssertion(Annotation( "FMA:14818") "appendiceal artery") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0039215") AnnotationAssertion(rdfs:label "appendicular artery") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (cystic artery) AnnotationAssertion(Annotation( ) Annotation( ) "An artery that supplies oxygenated blood to the cystic duct.") AnnotationAssertion( "FMA:14835") AnnotationAssertion(Annotation( "FMA:14835") "cholecystic artery") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0039222") AnnotationAssertion(rdfs:label "cystic artery") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) Annotation( "Wikipedia"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (sigmoid vein) AnnotationAssertion( "FMA:15395") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0039228") AnnotationAssertion(rdfs:label "sigmoid vein") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (prepyloric vein) AnnotationAssertion(Annotation( ) "The prepyloric vein is the last connecting branch onto the right gastric vein, marking the end of the stomach, and draining the proximal part of the duodenum") AnnotationAssertion( "FMA:15404") AnnotationAssertion(Annotation( "FMA:15404") "Mayo's vein") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0039230") AnnotationAssertion(rdfs:label "prepyloric vein") SubClassOf( ) # Class: (conus artery) AnnotationAssertion(Annotation( ) "The conus artery is generally considered to be the first branch of the right coronary artery (RCA) in the right sinus of Valsalva. However, one study has shown that in approximately 50% of humans, the conus artery arises from a discrete ostium in the right sinus of Valsalva.") AnnotationAssertion( "FMA:15736") AnnotationAssertion(Annotation( "FMA:15736") "second right coronary artery") AnnotationAssertion(Annotation( "FMA:15736") "third coronary artery") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0039232") AnnotationAssertion(rdfs:label "conus artery") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (pubic vein) AnnotationAssertion(Annotation( ) "vein ascending the posterior aspect of the body of the pubis to drain into the inferior epigastric vein; this vein frequently (about 20% of patients) serves as an accessory or replaced obturator vein.") AnnotationAssertion( "FMA:21200") AnnotationAssertion(Annotation( ) Annotation( "FMA:21200") "accessory obturator vein") AnnotationAssertion(Annotation( "FMA:21200") "pubic branch") AnnotationAssertion(Annotation( ) "pubic branch of inferior epigastric vein") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0039256") AnnotationAssertion(rdfs:label "pubic vein") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (external vertebral venous plexus) AnnotationAssertion( "FMA:12851") AnnotationAssertion(Annotation( "FMA:12851") "plexus venosus vertebralis externus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0039258") AnnotationAssertion(rdfs:label "external vertebral venous plexus") SubClassOf( ) # Class: (vertebral venous plexus) AnnotationAssertion( "FMA:18935") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0039259") AnnotationAssertion(rdfs:label "vertebral venous plexus") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (thyrocervical artery) AnnotationAssertion( "FMA:70346") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0039260") AnnotationAssertion(rdfs:label "thyrocervical artery") SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (pancreatic artery) AnnotationAssertion( "FMA:70471") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0039261") AnnotationAssertion(rdfs:label "pancreatic artery") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (segmental pulmonary artery) AnnotationAssertion( "FMA:8755") AnnotationAssertion(Annotation( "FMA:8755") "segmental pulmonary arterial tree") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:0039262") AnnotationAssertion(rdfs:label "segmental pulmonary artery") SubClassOf(Annotation( "FMA"^^xsd:string) ) # Class: (chin ventral margin) AnnotationAssertion(Annotation( ) Annotation( "UBERON:EJS") "Subdivision of the head consisting of the area along the lower edge of the chin.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:1000000") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "chin ventral margin") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (collection of hairs on vertex) AnnotationAssertion(Annotation( ) Annotation( "UBERON:EJS") "A collection of hairs that grows on the vertex (top of head).") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "uberon") AnnotationAssertion( "collection of hair on cranium") AnnotationAssertion( "cranial hair") AnnotationAssertion( "head hair") AnnotationAssertion( "UBERON:1000001") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "collection of hairs on vertex") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (cranial midline area) AnnotationAssertion(Annotation( ) Annotation( "UBERON:EJS") "The middle part of the head, located approximately equidistant from the left and the right sides of the head.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "uberon") AnnotationAssertion( "cranial midline") AnnotationAssertion( "UBERON:1000002") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "cranial midline area") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (dewlap) AnnotationAssertion(Annotation( ) "A longitudinal flap of skin that hangs beneath the lower jaw or neck.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:1000003") AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "Compare with: comb and wattle") AnnotationAssertion(rdfs:label "dewlap") SubClassOf( ) # Class: (collection of hair on external ear) AnnotationAssertion(Annotation( ) Annotation( "UBERON:EJS") "A collection of hairs that grows on the external ear.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "uberon") AnnotationAssertion( "external ear hair") AnnotationAssertion( "UBERON:1000004") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "collection of hair on external ear") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (external ear margin) AnnotationAssertion(Annotation( ) Annotation( "UBERON:EJS") "Anatomical junction consisting of the area along the edge of the external ear.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:1000005") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "external ear margin") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (collection of hair on forehead) AnnotationAssertion(Annotation( ) Annotation( "UBERON:EJS") "A collection of hairs that grows on the forehead.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:1000006") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "collection of hair on forehead") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (forehead protuberance) AnnotationAssertion(Annotation( ) Annotation( "UBERON:EJS") "A bulge, knob, or swelling that protrudes from the forehead.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:1000007") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "forehead protuberance") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (left part of face) AnnotationAssertion(Annotation( ) Annotation( "UBERON:EJS") "Subdivision of the head consisting of the left half of the face, vertically divided.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:1000008") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "left part of face") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (midline crest) AnnotationAssertion(Annotation( ) Annotation( "UBERON:EJS") "A ridge or peak located along the middle part of the head, located approximately equidistant from the left and the right sides of the head.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:1000009") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "midline crest") SubClassOf( ) # Class: (mole) AnnotationAssertion(Annotation( ) "A benign tumor on the skin, usually with darker pigment.") AnnotationAssertion(Annotation( "2012-08-14"^^xsd:string) Annotation( "TAO:0005043") Annotation( "TAO"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "An ectopic melanophore accumulation analogous to a nevi (mole) in humans.[TAO]") AnnotationAssertion( ) AnnotationAssertion( "EFO:0000625") AnnotationAssertion( "MPATH:361") AnnotationAssertion( "TAO:0005043") AnnotationAssertion( "ZFA:0005043") AnnotationAssertion(Annotation( "ZFA:0005043") "naevus") AnnotationAssertion(Annotation( "ZFA:0005043") "nevus") AnnotationAssertion( "uberon") AnnotationAssertion( "melanocytic nevus") AnnotationAssertion( "UBERON:1000010") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "mole") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "ZFA"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (labial commissure) AnnotationAssertion(Annotation( ) "Anatomical structure consisting of either corner of the mouth.") AnnotationAssertion( ) AnnotationAssertion( "FMA:277716") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "commissura labiorum oris") AnnotationAssertion( "commissural lip") AnnotationAssertion( "corner of mouth") AnnotationAssertion( "UBERON:1000011") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "labial commissure") AnnotationAssertion( "http://upload.wikimedia.org/wikipedia/commons/9/90/Commissurebeforeandafter.jpg"^^xsd:anyURI) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (nose anterior margin) AnnotationAssertion(Annotation( ) Annotation( "UBERON:EJS") "Subdivision of the head consisting of the area along the front edge of the external nose.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:1000012") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "nose anterior margin") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (nose vertex) AnnotationAssertion(Annotation( ) Annotation( "UBERON:EJS") "The extreme point of curvature of the external nose.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:1000013") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "nose vertex") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (right part of face) AnnotationAssertion(Annotation( ) Annotation( "UBERON:EJS") "Subdivision of the head consisting of the right half of the face, vertically divided.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:1000014") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "right part of face") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (skin of snout) AnnotationAssertion(Annotation( ) Annotation( "UBERON:EJS") "A zone of skin that is part of the snout.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "MA:th"^^xsd:string) "EMAPA:37746") AnnotationAssertion( "MA:0003079") AnnotationAssertion(Annotation( "MA:0003079") "snout skin") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:1000015") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "skin of snout") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (tip of snout) AnnotationAssertion(Annotation( ) Annotation( "UBERON:EJS") "Subdivision of the head consisting of the pointed or rounded end or extremity of the snout.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:1000016") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "tip of snout") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (tip of external ear) AnnotationAssertion(Annotation( ) Annotation( "UBERON:EJS") "Subdivision of the head consisting of the pointed or rounded end or extremity of the external ear.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:1000017") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "tip of external ear") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (cluster of hairs) AnnotationAssertion(Annotation( ) Annotation( "UBERON:EJS") "A small collection or tuft of hairs.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "uberon") AnnotationAssertion( "tuft of hair") AnnotationAssertion( "UBERON:1000018") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "cluster of hairs") SubClassOf( ) # Class: (top of head) AnnotationAssertion(Annotation( ) Annotation( "UBERON:EJS") "The top of the head.") AnnotationAssertion(Annotation( "FMA"^^xsd:string) "in the FMA, vertex is a point and not a subdivision") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:46484") AnnotationAssertion(Annotation( "FMA:46484") "vertex of head") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:46484") "vertex") AnnotationAssertion( "UBERON:1000019") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "top of head") SubClassOf( ) # Class: (collection of hair on snout) AnnotationAssertion(Annotation( ) Annotation( "UBERON:EJS") "A collection of hairs that grows on the snout.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "eriks") AnnotationAssertion( "2012-02-05T05:21:29Z") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:1000020") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "collection of hair on snout") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (skin of face) AnnotationAssertion(Annotation( ) Annotation( "UBERON:EJS") "A zone of skin that is part of the face.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "eriks") AnnotationAssertion( "2012-02-05T05:23:01Z") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:36657") AnnotationAssertion( "FMA:24758") AnnotationAssertion( "NCIT:C33561") AnnotationAssertion(Annotation( "ncithesaurus:Skin_of_the_Face") "UMLS:C0222084") AnnotationAssertion(Annotation( "EMAPA:36657") Annotation( "FMA:24758") "face skin") AnnotationAssertion( "uberon") AnnotationAssertion( "facial skin") AnnotationAssertion( "UBERON:1000021") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "skin of face") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (spleen pulp) AnnotationAssertion(Annotation( "ncithesaurus:Splenic_Pulp") "The parenchyma of the spleen, consisting of lymphocytes and macrophages. It lies between the splenic trabecula. Red pulp is the part suffused with blood and white pulp consists of areas of lymphatic tissue where there are sleeves of lymphocytes and macrophages.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "EMAPA:35805") AnnotationAssertion( "FMA:15845") AnnotationAssertion( "MA:0002487") AnnotationAssertion( "NCIT:C33603") AnnotationAssertion(Annotation( "ncithesaurus:Splenic_Pulp") "UMLS:C0229691") AnnotationAssertion(Annotation( "FMA:15845") "Malpighian corpuscles") AnnotationAssertion( "pulp of spleen") AnnotationAssertion( "splenic pulp") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:1000023") AnnotationAssertion(rdfs:label "spleen pulp") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "FMA"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (parenchyma of spleen) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "A parenchyma that is part of a spleen.") AnnotationAssertion( "FMA:16029") AnnotationAssertion(Annotation( "FMA:16029") "splenic parenchyma") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:1000024") AnnotationAssertion(rdfs:label "parenchyma of spleen") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (digestive tract junction) AnnotationAssertion(Annotation( ) "An anatomical junction between two parts of the digestive tract.") AnnotationAssertion( ) AnnotationAssertion( "2021-02-05T11:19:31Z") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:1100000") AnnotationAssertion(rdfs:label "digestive tract junction") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (scapular blade) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "Enlarged and broad extension of the scapula distal to the glenoid region that conforms to the contour of the ribs. Origin for the major shoulder muscles including the deltoid group.") AnnotationAssertion( "PERSON: Alex Dececchi") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:1500000") AnnotationAssertion(rdfs:comment "In non-tetrapod sarcopterygians the role of the scapula blade is filled by the enlarge cleithrum.") AnnotationAssertion(rdfs:label "scapular blade") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (ischial cartilage) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "Paired cartilaginous element forming the posterior portion of the pelvic girdle [D.F. Markle, BULLETIN OF MARINE SCIENCE. 30(1): 45-53. 1980].") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:1500005") AnnotationAssertion(rdfs:label "ischial cartilage") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete pelvic fin basipterygial radial element) AnnotationAssertion(Annotation( ) "Pelvic fin radial element that is an endochondral fused radial elements or pterygiophores at the base of the pelvic fin.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:1600009") AnnotationAssertion(rdfs:comment "Obsoleted because basipterygium is not a type of radial.") AnnotationAssertion(rdfs:label "obsolete pelvic fin basipterygial radial element") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (Brachet's cleft) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "The visible division between epiblast and hypoblast in the gastrula. Kimmel et al, 1995.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000000") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000000") AnnotationAssertion(rdfs:label "Brachet's cleft") SubClassOf( ) # Class: (obsolete adaxial cell) AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000003") AnnotationAssertion(Annotation( "TAO:0000003") Annotation( ) "adaxial cells") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000003") AnnotationAssertion(rdfs:comment "TO DO: replaced by CL:0007016 not in release of CL yet.") AnnotationAssertion(rdfs:label "obsolete adaxial cell") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (anterior axial hypoblast) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000004") AnnotationAssertion(Annotation( "ZFIN:ZDB-PUB-051019-5") "pre-polster") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000004") AnnotationAssertion(rdfs:label "anterior axial hypoblast") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete forerunner cell group) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "A group of cells that migrate at the leading edge of shield during gastrulation but do not involute. At the end of gastrulation, forerunner cells migrate deep into the embryo and organize to form Kuppfer's vesicle. Cooper and D'Amico, 1996.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000023") AnnotationAssertion(Annotation( "TAO:0000023") "DFCs") AnnotationAssertion(Annotation( "TAO:0000023") "dorsal forerunner cells") AnnotationAssertion(Annotation( "TAO:0000023") Annotation( ) "forerunner cells") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000023") AnnotationAssertion(rdfs:comment "incorrectly generalized to teleosts so being obsoleted. 'embryonic structure' and develops_from some 'noninvoluting endocytic marginal cell cluster'") AnnotationAssertion(rdfs:label "obsolete forerunner cell group") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (intermediate cell mass of mesoderm) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000033") AnnotationAssertion(Annotation( "TAO:0000033") "ICM") AnnotationAssertion(Annotation( "TAO:0000033") "intermediate cell mass of Oellacher") AnnotationAssertion(Annotation( "TAO:0000033") "posterior intermediate cell mass") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000033") AnnotationAssertion(rdfs:label "intermediate cell mass of mesoderm") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (median axial vein) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000039") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000039") AnnotationAssertion(rdfs:label "median axial vein") SubClassOf( ) # Class: (obsolete muscle pioneer somite 1) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000043") AnnotationAssertion(Annotation( "TAO:0000043") Annotation( ) "muscle pioneers somite 1") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000043") AnnotationAssertion(rdfs:label "obsolete muscle pioneer somite 1") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (myotome somite 14) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Portion of somite 14 that gives rise to body wall muscle masses. Kimmel et al, 1995.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000044") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000044") AnnotationAssertion(rdfs:label "myotome somite 14") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (polster) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "The hatching gland rudiment at the time it underlies the forebrain during the early segmentation period. Kimmel et al, 1995.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000058") AnnotationAssertion(Annotation( "ZFIN:ZDB-PUB-961014-576"^^xsd:string) "pillow") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000058") AnnotationAssertion(rdfs:label "polster") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (neural plate proneural cluster) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000068") AnnotationAssertion(Annotation( "TAO:0000068") Annotation( ) "neural plate proneural clusters") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "TAO:0000068") "proneural cluster") AnnotationAssertion( "UBERON:2000068") AnnotationAssertion(rdfs:label "neural plate proneural cluster") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete sensory axons peripheral) AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000070") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000070") AnnotationAssertion(rdfs:comment "removed axiom: part_of some 'sensory system'. Seems out of scope for uberon and/or not very useful as a class.") AnnotationAssertion(rdfs:label "obsolete sensory axons peripheral") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (somite 1) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Anteriormost undifferentiated mesodermal component of early trunk segment or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome. Kimmel et al, 1995.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "1"^^xsd:nonNegativeInteger) AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000072") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000072") AnnotationAssertion(rdfs:label "somite 1") SubClassOf( ) # Class: (somite 5) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Undifferentiated mesodermal component of early trunk segment 5 or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome. Kimmel et al, 1995.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "5"^^xsd:nonNegativeInteger) AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000073") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000073") AnnotationAssertion(rdfs:label "somite 5") SubClassOf( ) # Class: (somite 26) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Undifferentiated mesodermal component of early tail segment 26 or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome. Kimmel et al, 1995.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "26"^^xsd:nonNegativeInteger) AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000074") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000074") AnnotationAssertion(rdfs:label "somite 26") SubClassOf( ) # Class: (ventral mesoderm) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000083") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000083") AnnotationAssertion(rdfs:label "ventral mesoderm") SubClassOf( ) # Class: (yolk) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Nutrient store for embryonic development in the form of semicrystalline phospholipoprotein and contained within yolk granules. Kimmel et al, 1995.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000084") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000084") AnnotationAssertion(rdfs:label "yolk") SubClassOf( ) # Class: (yolk syncytial layer) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Peripheral layer of the yolk cell including nuclei and non-yolky cytoplasm. Kimmel et al, 1995.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000088") AnnotationAssertion(Annotation( "ZFIN:ZDB-PUB-961014-576"^^xsd:string) "YSL") AnnotationAssertion(Annotation( "ZFIN:ZDB-PUB-961014-576"^^xsd:string) "periblast") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000088") AnnotationAssertion(rdfs:label "yolk syncytial layer") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete axis) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion(Annotation( "TAO:0000092") "midline") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000092") AnnotationAssertion(rdfs:label "obsolete axis") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete blastomere) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "A cell arising during cleavage; the term encompasses the partially cleaved, incomplete cells at the blastodisc margin before they collectively form the yolk syncytial layer (YSL) in the midblastula. Kimmel et al, 1995.") AnnotationAssertion( "CL:0000353") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000093") AnnotationAssertion(Annotation( "TAO:0000093") Annotation( ) "blastomeres") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000093") AnnotationAssertion(rdfs:comment "Term already present in CL. For the subclasses, see http://purl.obolibrary.org/obo/cl/tracker/18") AnnotationAssertion(rdfs:label "obsolete blastomere") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (cardinal system) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000096") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000096") AnnotationAssertion(rdfs:label "cardinal system") SubClassOf( ) # Class: (proliferative region) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000098") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "TAO:0000098") "cell cycle") AnnotationAssertion(Annotation( "TAO:0000098") "cell division") AnnotationAssertion(Annotation( "TAO:0000098") "proliferation") AnnotationAssertion( "UBERON:2000098") AnnotationAssertion(rdfs:label "proliferative region") SubClassOf( ) # Class: (supramaxilla) AnnotationAssertion(Annotation( "TAO:ga_tg") "Dermal bone that is located on the dorsal margin of the maxilla, usually at the dorso-posterior region of maxilla. The supramaxilla is a paired bone.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000103") AnnotationAssertion(rdfs:comment "The supramaxilla may be present as one or two bones.") AnnotationAssertion(rdfs:label "supramaxilla") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (suprapreopercle) AnnotationAssertion(Annotation( "TAO:GA_TG"^^xsd:string) "Dermal bone that is located dorsal to the preopercle or lies on the antero-dorsal corner of the opercle, and encloses the upper section of the preopercular canal. The suprapreopercle is paired.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion(Annotation( "TAO:0000104") "supraopercle") AnnotationAssertion(Annotation( "TAO:0000104") "supraopercular bone") AnnotationAssertion(Annotation( "TAO:0000104") Annotation( ) "suprapreopercles") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000104") AnnotationAssertion(rdfs:comment "Synonyms: supraopercle (Roberts 1969) supraopercular bone (Buckup 1998)") AnnotationAssertion(rdfs:label "suprapreopercle") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (extension) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "The posterior elongated region of the yolk cell that forms during the segmentation period. Kimmel et al, 1995.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000106") AnnotationAssertion(Annotation( "ZFIN:ZDB-PUB-961014-576"^^xsd:string) "yolk extension") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000106") AnnotationAssertion(rdfs:label "extension") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (macula lagena) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000116") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000116") AnnotationAssertion(rdfs:label "macula lagena") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (antorbital) AnnotationAssertion(Annotation( "TAO:GA_TG"^^xsd:string) "Dermal bone positioned as the first bone of the infraorbital series. The antorbital articulates with the lacrimal or infraorbital 1 anteroventrally and the supraorbital posterodorsally. The antorbital is a paired bone.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion(Annotation( "TAO:Goodrich_1930") Annotation( "TAO:Regan_1923") "adnasal") AnnotationAssertion(Annotation( "TAO:Jollie_1984") "lateral rostral") AnnotationAssertion(Annotation( "TAO:Bridge_1877") "perorbital") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000127") AnnotationAssertion(rdfs:comment "The antorbital in some teleosts fuses with the lacrimal. The antorbital contains the end branch of the infraorbital canal or neuromasts for the infraorbital canal in basal teleosts such as elopiformes, some osteoglossomorphs and fossil basal teleosts.") AnnotationAssertion(rdfs:label "antorbital") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (immature otolith) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Brightly refractile stone-like organ within the otic vesicle and positioned over a sensory macula; two form in each vesicle during the late segmentation period. Kimmel et al, 1995. (Also see Anatomical Atlas entry for otolith by T. Whitfield.).") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion(Annotation( "TAO:0000139") Annotation( ) "immature otoliths") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000139") AnnotationAssertion(rdfs:label "immature otolith") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete presumptive epidermis) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000147") AnnotationAssertion(rdfs:label "obsolete presumptive epidermis") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (somite 20) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Undifferentiated mesodermal component of early trunk or tail segment 20 or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome. Kimmel et al, 1995.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "20"^^xsd:nonNegativeInteger) AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000156") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000156") AnnotationAssertion(rdfs:label "somite 20") SubClassOf( ) # Class: (somite 30) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Posteriormost undifferentiated mesodermal component of early tail segment or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome. Kimmel et al, 1995.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "30"^^xsd:nonNegativeInteger) AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000157") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000157") AnnotationAssertion(rdfs:label "somite 30") SubClassOf( ) # Class: (ventral mesenchyme) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000164") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000164") AnnotationAssertion(rdfs:label "ventral mesenchyme") SubClassOf( ) # Class: (inferior lobe) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000165") AnnotationAssertion(Annotation( "TAO:0000165") Annotation( ) "inferior lobes") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000165") AnnotationAssertion(rdfs:label "inferior lobe") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete anal fin skeleton) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Median fin skeleton that is located posterior to the anus.") AnnotationAssertion( "UBERON:4000166") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000167") AnnotationAssertion(rdfs:label "obsolete anal fin skeleton") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (anterior macula) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Macula that is located in the developing anterior inner ear, and gives rise to the macula utricle. (See Anatomical Atlas entry for sensory patches of the ear by T. Whitfield.).") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000168") AnnotationAssertion(Annotation( "TAO:0000168") "am") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000168") AnnotationAssertion(rdfs:label "anterior macula") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (interhyal bone) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Replacement bone that is bilaterally paired and articulates dorsally with the hyosymplectic cartilage or the articulation of the hyomandibula and symplectic.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion(Annotation( "TAO:0000171") "stylohyal bone") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000171") AnnotationAssertion(rdfs:comment "It articulates ventrally with the posterior end of the posterior ceratohyal.") AnnotationAssertion(rdfs:label "interhyal bone") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) SubClassOf( ObjectSomeValuesFrom( )) # Class: (caudal cerebellar tract) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000174") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000174") AnnotationAssertion(rdfs:label "caudal cerebellar tract") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lateral entopeduncular nucleus) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000176") AnnotationAssertion(rdfs:label "lateral entopeduncular nucleus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (caudal oblique) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000177") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000177") AnnotationAssertion(rdfs:label "caudal oblique") SubClassOf( ) # Class: (caudal peduncle) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000178") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000178") AnnotationAssertion(rdfs:label "caudal peduncle") SubClassOf( ) # Class: (obsolete caudal zone of D) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000181") AnnotationAssertion(Annotation( "TAO:0000181") "posterior zone of dorsal telencephalic area") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000181") AnnotationAssertion(rdfs:label "obsolete caudal zone of D") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (central caudal thalamic nucleus) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000182") AnnotationAssertion(Annotation( "TAO:0000182") "central posterior thalamic nucleus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000182") AnnotationAssertion(rdfs:label "central caudal thalamic nucleus") SubClassOf( ) # Class: (central pretectum) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000183") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000183") AnnotationAssertion(rdfs:label "central pretectum") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (commissura rostral, pars ventralis) AnnotationAssertion(Annotation( "ISBN:3764351209") "Part of the anterior commissure which abuts the preoptic region dorsally.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000185") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000185") AnnotationAssertion(rdfs:label "commissura rostral, pars ventralis") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lateral granular eminence) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000187") AnnotationAssertion(rdfs:label "lateral granular eminence") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (corpus cerebelli) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000188") AnnotationAssertion(Annotation( "TAO:0000188") "cerebellar corpus") AnnotationAssertion(Annotation( "TAO:0000188") "corpus cerebellum") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000188") AnnotationAssertion(rdfs:label "corpus cerebelli") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (diffuse nuclei) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000193") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000193") AnnotationAssertion(rdfs:label "diffuse nuclei") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete dorsal nucleus) AnnotationAssertion( "UBERON:0008993") AnnotationAssertion( "ZFA:0000197") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000197") AnnotationAssertion(rdfs:label "obsolete dorsal nucleus") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (dorsal periventricular hypothalamus) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000199") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000199") AnnotationAssertion(rdfs:label "dorsal periventricular hypothalamus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (dorsal transverse) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000201") AnnotationAssertion(Annotation( "TAO:0000201") "transversus dorsalis") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000201") AnnotationAssertion(rdfs:label "dorsal transverse") SubClassOf( ) # Class: (rhinosphenoid) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "An endochondral bone which is located anterior to the orbitosphenoid and medial to the paired lateral ethmoid. Rhinosphenoid is a median bone.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000203") AnnotationAssertion(rdfs:label "rhinosphenoid") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lateral preglomerular nucleus) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000209") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000209") AnnotationAssertion(rdfs:label "lateral preglomerular nucleus") SubClassOf( ) # Class: (gigantocellular part of magnocellular preoptic nucleus) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000210") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000210") AnnotationAssertion(rdfs:label "gigantocellular part of magnocellular preoptic nucleus") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (granular eminence) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000212") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000212") AnnotationAssertion(rdfs:label "granular eminence") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (hypobranchial vessel) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000214") AnnotationAssertion(Annotation( "TAO:0000214") Annotation( ) "hypobranchial vessels") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000214") AnnotationAssertion(rdfs:label "hypobranchial vessel") SubClassOf( ) # Class: (infracarinalis) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000216") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000216") AnnotationAssertion(rdfs:label "infracarinalis") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (internal levator) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000221") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000221") AnnotationAssertion(rdfs:label "internal levator") SubClassOf( ) # Class: (isthmic primary nucleus) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000222") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000222") AnnotationAssertion(rdfs:label "isthmic primary nucleus") SubClassOf( ) # Class: (infraorbital 1) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Infraorbital in fishes that is the first (anteriormost) bone of the infraorbital series.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000223") AnnotationAssertion(Annotation( "PSPUB:0000119") "lachrymal") AnnotationAssertion(Annotation( "PSPUB:0000164"^^xsd:string) "lacrymal") AnnotationAssertion(Annotation( "TAO:0000223") "suborbital") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "TAO:0000223") "lachrymal bone") AnnotationAssertion(Annotation( "TAO:0000223") "lacrimal bone") AnnotationAssertion(Annotation( "TAO:0000223") "lacrymal bone") AnnotationAssertion( "UBERON:2000223") AnnotationAssertion(rdfs:comment "Suborbital and infraorbital 1 are synonymized by some authors (e.g., Cuvier), however, a suborbital bone in fishes has a different meaning than an infraorbital 1; it is a bone(s) that it is placed between the postero-dorsal infraorbitals and preopercle. A suborbital (also named postorbital by some authors) is not present in extant teleosts with the exception of Arapaima where it is occasionally present. Suborbital bones are found in some fossil basal teleosts. [G. Arratia]") AnnotationAssertion(rdfs:label "infraorbital 1") SubClassOf( ) # Class: (lateral crista primordium) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000225") AnnotationAssertion(Annotation( "TAO:0000225") Annotation( ) "lateral crista primordia") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000225") AnnotationAssertion(rdfs:label "lateral crista primordium") SubClassOf( ) SubClassOf( ) # Class: (lateral semicircular canal primordium) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000232") AnnotationAssertion(Annotation( "TAO:0000232") Annotation( ) "lateral semicircular canal primordia") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000232") AnnotationAssertion(rdfs:label "lateral semicircular canal primordium") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lower oral valve) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000233") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000233") AnnotationAssertion(rdfs:label "lower oral valve") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (macula neglecta) AnnotationAssertion(Annotation( "ZFA:0000234") "Macula positioned on the floor of the utricle adjacent to the utriculosaccular foramen at the base of the common crus.") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000234") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000234") AnnotationAssertion(rdfs:label "macula neglecta") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete magnocellular superficial pretectal nucleus) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000235") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000235") AnnotationAssertion(rdfs:label "obsolete magnocellular superficial pretectal nucleus") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete medial forebrain bundle diencephalon) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000237") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000237") AnnotationAssertion(rdfs:label "obsolete medial forebrain bundle diencephalon") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (olfactory tract linking bulb to ipsilateral ventral telencephalon) AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000238") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000238") AnnotationAssertion(rdfs:label "olfactory tract linking bulb to ipsilateral ventral telencephalon") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) # Class: (mesocoracoid bone) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Endochondral bone that articulates laterally with the medial surface of the cleithrum and ventro-medially with the scapula and coracoid. Meoscoracoid bone is a small, arch-like bone that develops from the mesocoracoid cartilage. Mesocoracoid bone is paired.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000239") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "TAO:0000239") "mesocoracoideum") AnnotationAssertion( "UBERON:2000239") AnnotationAssertion(rdfs:label "mesocoracoid bone") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (midline column) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000241") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000241") AnnotationAssertion(rdfs:label "midline column") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (nucleus of the descending root) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000245") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000245") AnnotationAssertion(rdfs:label "nucleus of the descending root") SubClassOf( ) # Class: (obsolete nucleus taeniae) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000246") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000246") AnnotationAssertion(rdfs:label "obsolete nucleus taeniae") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (magnocellular preoptic nucleus) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000248") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000248") AnnotationAssertion(rdfs:label "magnocellular preoptic nucleus") SubClassOf( ) # Class: (opercle) AnnotationAssertion(Annotation( "TAO:GA_TG"^^xsd:string) "Dermal bone that forms the postero-dorsal part of the opercular series. The opercle articulates with the hyomandibula antero-dorsally and with the subopercle ventrally. The opercle is a paired bone.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000250") AnnotationAssertion(Annotation( "TAO:0000250") Annotation( ) "opercles") AnnotationAssertion(Annotation( "TAO:0000250") "operculare") AnnotationAssertion(Annotation( "TAO:0000250") "operculum") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000250") AnnotationAssertion(rdfs:comment "The opercle is usually a large, flat bone that may be partially covered by the posterior region of the preopercle.") AnnotationAssertion(rdfs:label "opercle") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) # Class: (obsolete pars subcommissuralis of V) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000256") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000256") AnnotationAssertion(rdfs:label "obsolete pars subcommissuralis of V") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (pharyngohyoid) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000261") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000261") AnnotationAssertion(rdfs:label "pharyngohyoid") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (preopercle) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Dermal bone that is part of the opercular series and bears the preopercular sensory canal. The preopercle is a paired bone and typically L-shaped, with the horizontal limb overlying the interopercle and the vertical limb overlying the opercle.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000264") AnnotationAssertion(Annotation( "TAO:0000264") Annotation( ) "preopercles") AnnotationAssertion(Annotation( "TAO:0000264") "preoperculum") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000264") AnnotationAssertion(rdfs:label "preopercle") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) # Class: (obsolete presumptive dorsal mesoderm) AnnotationAssertion(Annotation( "ZFA:0000265") "Portion of presumptive mesoderm fated to become dorsal mesoderm.") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000265") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000265") AnnotationAssertion(rdfs:label "obsolete presumptive dorsal mesoderm") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete pretecto-mamillary tract) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000266") AnnotationAssertion(Annotation( "TAO:0000266") "pretectomamillary tract") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000266") AnnotationAssertion(rdfs:label "obsolete pretecto-mamillary tract") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (primary olfactory fiber layer) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000267") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000267") AnnotationAssertion(rdfs:label "primary olfactory fiber layer") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (rostral octaval nerve sensory nucleus) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000274") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000274") AnnotationAssertion(rdfs:label "rostral octaval nerve sensory nucleus") SubClassOf( ) # Class: (rostrolateral thalamic nucleus of Butler & Saidel) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000276") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000276") AnnotationAssertion(rdfs:label "rostrolateral thalamic nucleus of Butler & Saidel") SubClassOf( ) # Class: (secondary gustatory nucleus medulla oblongata) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000278") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000278") AnnotationAssertion(rdfs:label "secondary gustatory nucleus medulla oblongata") SubClassOf( ) # Class: (obsolete hair cell posterior macula) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Specialized neuronal receptor cells of the lateral line and acoustico-vestibular systems. Kimmel et al, 1995. (Also see Anatomical Atlas entry for hair cells by T. Whitfield.).") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000281") AnnotationAssertion(Annotation( "TAO:0000281") Annotation( ) "sensory hair cells posterior macula") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000281") AnnotationAssertion(rdfs:label "obsolete hair cell posterior macula") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete sternohyoid) AnnotationAssertion( "UBERON:0001107") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000283") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000283") AnnotationAssertion(rdfs:label "obsolete sternohyoid") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (subopercle) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Dermal bone that is part of the opercular series, lying below the opercle. The subopercle is paired and is typically a thin bone.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000284") AnnotationAssertion(Annotation( "TAO:0000284") Annotation( ) "subopercles") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000284") AnnotationAssertion(rdfs:label "subopercle") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (superficial adductor) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000285") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000285") AnnotationAssertion(rdfs:label "superficial adductor") SubClassOf( ) SubClassOf( ) # Class: (superficial lateralis (teleost)) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000286") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000286") AnnotationAssertion(rdfs:label "superficial lateralis (teleost)") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (supracarinalis) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000288") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000288") AnnotationAssertion(rdfs:label "supracarinalis") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (preopercle horizontal limb) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "A dermal bone that is the lower, horizontal portion of the preopercle bone.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001594") AnnotationAssertion(Annotation( "TAO:0000289") "preopercle horizontal arm") AnnotationAssertion(Annotation( "TAO:0000289") "preopercle lower limb") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000289") AnnotationAssertion(rdfs:label "preopercle horizontal limb") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) # Class: (medial octavolateralis nucleus) AnnotationAssertion(Annotation( "ZFA:0000291") "Lateral line sensory nucleus located in the cerebellum that processes sensory input from the lateral line.") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000291") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000291") AnnotationAssertion(rdfs:label "medial octavolateralis nucleus") SubClassOf( ) # Class: (synencephalon) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000293") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000293") AnnotationAssertion(rdfs:label "synencephalon") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (torus lateralis) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000294") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000294") AnnotationAssertion(rdfs:label "torus lateralis") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (uncrossed tecto-bulbar tract) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000296") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000296") AnnotationAssertion(rdfs:label "uncrossed tecto-bulbar tract") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (vagal lobe) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "TAO:0000297") "nX") AnnotationAssertion( "UBERON:2000297") AnnotationAssertion(rdfs:label "vagal lobe") SubClassOf( ) # Class: (vent) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000298") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000298") AnnotationAssertion(rdfs:label "vent") SubClassOf( ) # Class: (obsolete ventral entopeduncular nucleus V) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000299") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000299") AnnotationAssertion(rdfs:label "obsolete ventral entopeduncular nucleus V") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete ventral nucleus) AnnotationAssertion( "UBERON:0008993") AnnotationAssertion( "ZFA:0000302") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000302") AnnotationAssertion(rdfs:label "obsolete ventral nucleus") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (ventral sulcus) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000305") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000305") AnnotationAssertion(rdfs:label "ventral sulcus") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (vestibulolateralis lobe) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000307") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000307") AnnotationAssertion(rdfs:label "vestibulolateralis lobe") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (external yolk syncytial layer) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "The portion of the YSL that is outside of the blastoderm margin during epiboly. Kimmel et al, 1995.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000309") AnnotationAssertion(Annotation( "ZFIN:ZDB-PUB-961014-576"^^xsd:string) "E-YSL") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000309") AnnotationAssertion(rdfs:label "external yolk syncytial layer") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (adductor mandibulae complex) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000311") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000311") AnnotationAssertion(rdfs:label "adductor mandibulae complex") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (asteriscus) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000315") AnnotationAssertion(Annotation( "TAO:0000315") "lagenar otolith") AnnotationAssertion(Annotation( "TAO:0000315") "lagenolith") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000315") AnnotationAssertion(rdfs:label "asteriscus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (brainstem and spinal white matter) AnnotationAssertion(Annotation( "ZFIN") "CNS white matter that is part of the brain stem or spinal cord.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000318") AnnotationAssertion(Annotation( "TAO:0000318") Annotation( ) "brain stem/spinal tracts and commissures") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000318") AnnotationAssertion(rdfs:label "brainstem and spinal white matter") SubClassOf( ) # Class: (caudal levator) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000321") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000321") AnnotationAssertion(rdfs:label "caudal levator") SubClassOf( ) # Class: (caudal octaval nerve sensory nucleus) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000322") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000322") AnnotationAssertion(rdfs:label "caudal octaval nerve sensory nucleus") SubClassOf( ) # Class: (caudal periventricular hypothalamus) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000324") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000324") AnnotationAssertion(rdfs:label "caudal periventricular hypothalamus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete commissure infima of Haller) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000331") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000331") AnnotationAssertion(rdfs:label "obsolete commissure infima of Haller") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (crossed tecto-bulbar tract) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000335") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000335") AnnotationAssertion(rdfs:label "crossed tecto-bulbar tract") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (preopercle vertical limb) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "A dermal bone that is the upper, vertical portion of the preopercle bone.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001595") AnnotationAssertion(Annotation( "TAO:0000336") "ascending arm of preopercle") AnnotationAssertion(Annotation( "TAO:0000336") "preopercle upper limb") AnnotationAssertion(Annotation( "TAO:0000336") "preopercle vertical arm") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000336") AnnotationAssertion(rdfs:label "preopercle vertical limb") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) # Class: (basioccipital posterodorsal region) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Endochondral bone which is the posterodorsal region of the basioccipital bone.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001598") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000337") AnnotationAssertion(rdfs:label "basioccipital posterodorsal region") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete dorsal entopeduncular nucleus) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000340") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000340") AnnotationAssertion(rdfs:label "obsolete dorsal entopeduncular nucleus") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete dorsal nucleus of V) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000343") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000343") AnnotationAssertion(rdfs:label "obsolete dorsal nucleus of V") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (dorsal zone of median tuberal portion of hypothalamus) AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000347") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000347") AnnotationAssertion(rdfs:label "dorsal zone of median tuberal portion of hypothalamus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (exoccipital posteroventral region) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Endochondral bone which is the posterodorsal region of the exoccipital bone.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001597") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000348") AnnotationAssertion(rdfs:label "exoccipital posteroventral region") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (epaxialis) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000349") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000349") AnnotationAssertion(rdfs:label "epaxialis") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (epipleural) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Epipleurals lie below the horizontal septum and are posteroventrally directed. There are ossified epipleurals in certain ostariophysans. In many lower elopocephalan teleosts including ostariophysans the epipleural bones develop an anterodorsal branch so that they are forked proximally.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000350") AnnotationAssertion(Annotation( "TAO:0000350") Annotation( ) "epipleurals") AnnotationAssertion(Annotation( "PSPUB:0000153") "pleuroïde") AnnotationAssertion(Annotation( "PSPUB:0000164"^^xsd:string) "épipleural") AnnotationAssertion(Annotation( "PSPUB:0000133") "épipleure") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000350") AnnotationAssertion(rdfs:label "epipleural") SubClassOf( ) # Class: (external cellular layer) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000352") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000352") AnnotationAssertion(rdfs:label "external cellular layer") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (granular layer corpus cerebelli) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000358") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000358") AnnotationAssertion(rdfs:label "granular layer corpus cerebelli") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (hypaxialis) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000362") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000362") AnnotationAssertion(rdfs:label "hypaxialis") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (hypobranchial bone) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Replacement bone that is bilaterally paired and articulates medially with a median skeletal element and laterally with a ceratobranchial cartilage or bone.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000363") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000363") AnnotationAssertion(rdfs:label "hypobranchial bone") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (internal pharyngoclavicularis) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000371") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000371") AnnotationAssertion(rdfs:label "internal pharyngoclavicularis") SubClassOf( ) # Class: (interpeduncular nucleus medulla oblongata) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000372") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000372") AnnotationAssertion(rdfs:label "interpeduncular nucleus medulla oblongata") SubClassOf( ) # Class: (infraorbital) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Dermal bone that is located anterior, ventral or posterior to the eye. Infraorbital bones may or may not contain the infraorbital sensory canal. Infraorbital bones are numbered starting with the anteriormost element of the series.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "UBERON:2000489") AnnotationAssertion( "ZFA:0000376") AnnotationAssertion(Annotation( "TAO:0000376") "circumorbital series") AnnotationAssertion(Annotation( "TAO:0000376") Annotation( ) "circumorbitals") AnnotationAssertion(Annotation( "TAO:0000376") Annotation( ) "infraorbitals") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "TAO:0000376") "infraorbital series") AnnotationAssertion( "UBERON:2000376") AnnotationAssertion(rdfs:label "infraorbital") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete lateral forebrain bundle diencephalon) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000379") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000379") AnnotationAssertion(rdfs:label "obsolete lateral forebrain bundle diencephalon") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (lateral line sensory nucleus) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000381") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000381") AnnotationAssertion(rdfs:label "lateral line sensory nucleus") SubClassOf( ) # Class: (levator arcus palatini) AnnotationAssertion(Annotation( ) "Jaw muscle that connects the sphenotic to the metapterygoid and hyomandibula and promotes the elevation/abduction of the suspensorium.") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000384") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000384") AnnotationAssertion(rdfs:label "levator arcus palatini") SubClassOf( ) # Class: (obsolete nucleus motorius of nervi vagi) AnnotationAssertion( "UBERON:0011778") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000387") AnnotationAssertion(rdfs:label "obsolete nucleus motorius of nervi vagi") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (medial caudal lobe) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000388") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000388") AnnotationAssertion(rdfs:label "medial caudal lobe") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (medial funicular nucleus medulla oblongata) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000389") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000389") AnnotationAssertion(rdfs:label "medial funicular nucleus medulla oblongata") SubClassOf( ) # Class: (medial preglomerular nucleus) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000390") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000390") AnnotationAssertion(rdfs:label "medial preglomerular nucleus") SubClassOf( ) # Class: (obsolete medial zone of D) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000391") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000391") AnnotationAssertion(rdfs:label "obsolete medial zone of D") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (median tuberal portion) AnnotationAssertion(Annotation( "ISBN:3764351209") "Multi-tissue structure which is part of the hypothalamus and consists of caudal and ventral zones, and is separated from the dorsal hypothalamic zone by a deep ventral sulcus. From Neuroanatomy of the Zebrafish Brain.") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000392") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000392") AnnotationAssertion(rdfs:label "median tuberal portion") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (molecular layer corpus cerebelli) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000394") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000394") AnnotationAssertion(rdfs:label "molecular layer corpus cerebelli") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete muscle pioneer somite 2) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000395") AnnotationAssertion(Annotation( "TAO:0000395") Annotation( ) "muscle pioneers somite 2") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000395") AnnotationAssertion(rdfs:label "obsolete muscle pioneer somite 2") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (nucleus subglomerulosis) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000397") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000397") AnnotationAssertion(rdfs:label "nucleus subglomerulosis") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (nucleus isthmi) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000398") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000398") AnnotationAssertion(rdfs:label "nucleus isthmi") SubClassOf( ) # Class: (secondary gustatory nucleus trigeminal nuclei) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000399") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000399") AnnotationAssertion(rdfs:label "secondary gustatory nucleus trigeminal nuclei") SubClassOf( ) # Class: (octaval nerve sensory nucleus) AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000401") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000401") AnnotationAssertion(rdfs:comment "TO DO: see DOI: 10.1002/cne.902660403 for next steps in defining different octaval nerve nuclei.") AnnotationAssertion(rdfs:label "octaval nerve sensory nucleus") SubClassOf( ) SubClassOf( ) # Class: (obsolete parvocellular superficial pretectal nucleus) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000406") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000406") AnnotationAssertion(rdfs:label "obsolete parvocellular superficial pretectal nucleus") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (periventricular nucleus of caudal tuberculum) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000408") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000408") AnnotationAssertion(rdfs:label "periventricular nucleus of caudal tuberculum") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (postcleithrum) AnnotationAssertion(Annotation( "TAO:GA_TG"^^xsd:string) Annotation( "TAO:wd"^^xsd:string) "Dermal bone placed postero-medially to the supracleithrum and/or cleithrum.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000410") AnnotationAssertion(Annotation( "PSPUB:0000131") "métacleithrum") AnnotationAssertion(Annotation( "PSPUB:0000131") "métaclithrum") AnnotationAssertion(Annotation( "PSPUB:0000143") "paraclithrum") AnnotationAssertion(Annotation( "TAO:0000410") "postclavicle") AnnotationAssertion(Annotation( "TAO:0000410") Annotation( ) "postcleithra") AnnotationAssertion(Annotation( "PSPUB:0000164"^^xsd:string) "postcleithrum") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000410") AnnotationAssertion(rdfs:comment "Commonly, the postcleithra form a bilateral series including one to three flat, thin postcleithra of variable shapes (in teleosts). Basal teleosts may have a series up to seven postcleithra (see Arratia 1984 and 1997 and references herein).") AnnotationAssertion(rdfs:label "postcleithrum") SubClassOf( ) SubClassOf( ) # Class: (posterior crista primordium) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000411") AnnotationAssertion(Annotation( "TAO:0000411") Annotation( ) "posterior crista primordia") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000411") AnnotationAssertion(rdfs:label "posterior crista primordium") SubClassOf( ) SubClassOf( ) # Class: (posterior semicircular canal primordium) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000412") AnnotationAssertion(Annotation( "TAO:0000412") Annotation( ) "posterior semicircular canal primordia") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000412") AnnotationAssertion(rdfs:label "posterior semicircular canal primordium") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (presumptive cephalic mesoderm) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000414") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000414") AnnotationAssertion(rdfs:label "presumptive cephalic mesoderm") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pterosphenoid) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Endochondral bone that sutures with the orbitosphenoid anteriorly, the frontal bone dorsally and the sphenotic and prootic posteriorly. The pterosphenoid forms part of the orbitosphenoid region. The pterosphenoid bears foramina that accommodate branches of the trigeminal and facial nerves. The pterosphenoid is a paired bone.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000419") AnnotationAssertion(Annotation( "TAO:0000419") "alisphenoid") AnnotationAssertion(Annotation( "TAO:0000419") Annotation( ) "pterosphenoids") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000419") AnnotationAssertion(rdfs:label "pterosphenoid") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) SubClassOf( ObjectSomeValuesFrom( )) # Class: (retroarticular) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "The retroarticular is a cartilage bone that forms at the posteroventral tip of Meckel's cartilage where the interoperculomandibular ligament attaches (5.1 mm NL). In the adult it is basically triangular in shape. The retroarticular is ligamentously connected to the interopercle and preopercle posteriorly and abuts the ventral shelf of the dentary anteriorly.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000422") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000422") AnnotationAssertion(rdfs:label "retroarticular") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (rostral parvocellular preoptic nucleus) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000426") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000426") AnnotationAssertion(rdfs:label "rostral parvocellular preoptic nucleus") SubClassOf( ) SubClassOf( ) # Class: (scaphium) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Neural arch and Weberian ossicle that is reduced in size relative to other neural arches. Scaphium has a process which articulates with the first centrum.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000429") AnnotationAssertion(Annotation( "TAO:0000429") "Weberian ossicle 2") AnnotationAssertion(Annotation( "TAO:0000429") "second Weberian ossicle") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000429") AnnotationAssertion(rdfs:label "scaphium") SubClassOf( ) SubClassOf( ) # Class: (secondary gustatory tract) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000430") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000430") AnnotationAssertion(rdfs:label "secondary gustatory tract") SubClassOf( ) # Class: (superficial pelvic abductor) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000439") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000439") AnnotationAssertion(rdfs:label "superficial pelvic abductor") SubClassOf( ) SubClassOf( ) # Class: (superior raphe nucleus) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000440") AnnotationAssertion(Annotation( "TAO:0000440") "anterior raphe nucleus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000440") AnnotationAssertion(rdfs:label "superior raphe nucleus") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (supraneural bone) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Endochondral bone that is median and located in the dorsal skeletogenous septum between the cranium and the dorsal fin.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000442") AnnotationAssertion(Annotation( "PSPUB:0000164"^^xsd:string) "axonoste libre") AnnotationAssertion(Annotation( "TAO:0000442") "predorsal") AnnotationAssertion(Annotation( "TAO:0000442") "predorsal bone") AnnotationAssertion(Annotation( "PSPUB:0000156") "pseudaxonoste") AnnotationAssertion(Annotation( "TAO:0000442") "sn") AnnotationAssertion(Annotation( "PSPUB:0000164"^^xsd:string) "supraneural") AnnotationAssertion(Annotation( "TAO:0000442") Annotation( ) "supraneurals") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000442") AnnotationAssertion(rdfs:label "supraneural bone") SubClassOf( ) SubClassOf( ) # Class: (tertiary gustatory nucleus) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000448") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000448") AnnotationAssertion(rdfs:label "tertiary gustatory nucleus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (torus longitudinalis) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000449") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000449") AnnotationAssertion(rdfs:label "torus longitudinalis") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (upper oral valve) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000451") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000451") AnnotationAssertion(rdfs:label "upper oral valve") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete ventral nucleus of V) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000456") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000456") AnnotationAssertion(rdfs:label "obsolete ventral nucleus of V") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (ventromedial thalamic nucleus) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000459") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000459") AnnotationAssertion(rdfs:label "ventromedial thalamic nucleus") SubClassOf( ) # Class: (abductor hyohyoid) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000462") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000462") AnnotationAssertion(rdfs:label "abductor hyohyoid") SubClassOf( ) # Class: (obsolete adductor) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "UBERON:0011145") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000463") AnnotationAssertion(rdfs:comment "false") AnnotationAssertion(rdfs:label "obsolete adductor") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (adductor operculi) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000465") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000465") AnnotationAssertion(rdfs:label "adductor operculi") SubClassOf( ) # Class: (anterior crista primordium) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000468") AnnotationAssertion(Annotation( "TAO:0000468") Annotation( ) "anterior crista primordia") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000468") AnnotationAssertion(rdfs:label "anterior crista primordium") SubClassOf( ) # Class: (anterior semicircular canal primordium) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000469") AnnotationAssertion(Annotation( "TAO:0000469") Annotation( ) "anterior semicircular canal primordia") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000469") AnnotationAssertion(rdfs:label "anterior semicircular canal primordium") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (intercalar) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Small membrane bone homologous with a cartilage bone in more basal fishes (Patterson, 1977). Situated between the exoccipital and the pterotic at point of attachment of short ligament that originates on the ventral arm of the posttemporal.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000474") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "TAO:0000474") "opisthotic") AnnotationAssertion( "UBERON:2000474") AnnotationAssertion(rdfs:label "intercalar") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (paraventricular organ) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000475") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000475") AnnotationAssertion(rdfs:label "paraventricular organ") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (branchiostegal ray) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Dermal bone that is a flattened element that supports the branchiostegal membrane. Branchiostegal rays are generally present in a series articulating ventrally or ventro-medially with the anterior and posterior ceratobranchials whereas the most posterior ray articulates with the subopercle. The branchiostegal ray is paired.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000476") AnnotationAssertion(Annotation( "TAO:0000476") Annotation( ) "branchiostegal rays") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000476") AnnotationAssertion(rdfs:comment "Although the branchiostegals are articulated or attached to the hyoid arch, they belong to the opercular series. Branchiostegal rays are of variable shape and number and their homology is problematic. Usually they are numbered from anterior to posterior elements, instead from posterior to anteriorly considering that the last element of the series is consistently associated to the subopercle. For a survey of branchiostegal rays see Mc Allister (1968).") AnnotationAssertion(rdfs:label "branchiostegal ray") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) # Class: (caudal mesencephalo-cerebellar tract) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000479") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000479") AnnotationAssertion(rdfs:label "caudal mesencephalo-cerebellar tract") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (caudal octavolateralis nucleus) AnnotationAssertion(Annotation( "ISBN:3764351209") "Hindbrain nucleus which is part of the medulla oblongata and is a mechanoreceptive area along with the medial octavolateralis nucleus. It is smaller than the medial octavolateralis nucleus and is located lateral to the facial and vagal lobes of the medulla oblongata. From Neuroanatomy of the Zebrafish Brain.") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000480") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000480") AnnotationAssertion(rdfs:label "caudal octavolateralis nucleus") SubClassOf( ) # Class: (caudal preglomerular nucleus) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000481") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000481") AnnotationAssertion(rdfs:label "caudal preglomerular nucleus") SubClassOf( ) # Class: (caudal tuberal nucleus) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000482") AnnotationAssertion(Annotation( "TAO:0000482") "posterior tuberal nucleus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000482") AnnotationAssertion(rdfs:label "caudal tuberal nucleus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (celiacomesenteric artery) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000484") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000484") AnnotationAssertion(rdfs:label "celiacomesenteric artery") SubClassOf( ) # Class: (central nucleus inferior lobe) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000485") AnnotationAssertion(Annotation( "TAO:0000485") Annotation( ) "central nucleus inferior lobes") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000485") AnnotationAssertion(rdfs:label "central nucleus inferior lobe") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete central zone of D) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000487") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000487") AnnotationAssertion(rdfs:label "obsolete central zone of D") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (ceratobranchial bone) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Endochondral bone that is bilaterally paired and forms part of the ventral branchial arches.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000488") AnnotationAssertion(Annotation( "TAO:0000488") Annotation( ) "ceratobranchials") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000488") AnnotationAssertion(rdfs:label "ceratobranchial bone") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete commissure of the caudal tuberculum) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000491") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000491") AnnotationAssertion(rdfs:label "obsolete commissure of the caudal tuberculum") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (coracoradialis) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000492") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000492") AnnotationAssertion(rdfs:label "coracoradialis") SubClassOf( ) # Class: (obsolete decussation of medial funicular nucleus) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000493") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000493") AnnotationAssertion(rdfs:label "obsolete decussation of medial funicular nucleus") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (infraorbital 5) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Infraorbital that is the fifth bone of the infraorbital series.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000495") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "TAO:0000495") "dermosphenotic") AnnotationAssertion( "UBERON:2000495") AnnotationAssertion(rdfs:label "infraorbital 5") SubClassOf( ) # Class: (pelvic adductor profundus) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000497") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000497") AnnotationAssertion(rdfs:label "pelvic adductor profundus") SubClassOf( ) SubClassOf( ) # Class: (dilatator operculi) AnnotationAssertion(Annotation( ) Annotation( ) Annotation( "ZFA:0000498") "Mandibular muscle that inserts along the dorsolateral faces of the opercles. Responsible for opercular abduction.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000498") AnnotationAssertion( "uberon") AnnotationAssertion( "dilator operculi") AnnotationAssertion( "UBERON:2000498") AnnotationAssertion(rdfs:label "dilatator operculi") SubClassOf( ) # Class: (dorsal arrector) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000499") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000499") AnnotationAssertion(rdfs:label "dorsal arrector") SubClassOf( ) SubClassOf( ) # Class: (dorsal motor nucleus trigeminal nerve) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000502") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "TAO:0000502") "motor nucleus V") AnnotationAssertion(Annotation( "TAO:0000502") "nV") AnnotationAssertion( "UBERON:2000502") AnnotationAssertion(rdfs:label "dorsal motor nucleus trigeminal nerve") SubClassOf( ) # Class: (dorsal oblique branchial muscle) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000503") AnnotationAssertion(Annotation( "TAO:0000503") Annotation( ) "dorsal oblique branchial muscles") AnnotationAssertion(Annotation( ) "obliquues dorsalis") AnnotationAssertion(Annotation(rdfs:comment "https://doi.org/10.1093/sysbio/sys060") "obliquus dorsalis") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000503") AnnotationAssertion(rdfs:label "dorsal oblique branchial muscle") SubClassOf( ) # Class: (dorsal retractor) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000504") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000504") AnnotationAssertion(rdfs:label "dorsal retractor") SubClassOf( ) # Class: (obsolete dorsal zone of D) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000506") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000506") AnnotationAssertion(rdfs:label "obsolete dorsal zone of D") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (epineural) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Some or all epineural bones ossify free from the neural arches in most teleosts. In some lower teleosts, e.g., Leptolepis, Hiodon, elopiforms and albuliforms, ossification proceeds from the attachment point of the ligament to the arch, and the epineural is a process of the neural arch. In many lower teleosts epineurals are forked proximally.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000507") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000507") AnnotationAssertion(rdfs:label "epineural") SubClassOf( ) # Class: (external levatores) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000510") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000510") AnnotationAssertion(rdfs:label "external levatores") SubClassOf( ) # Class: (facial lobe) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000512") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000512") AnnotationAssertion(rdfs:label "facial lobe") SubClassOf( ) # Class: (obsolete fast muscle cell somite 1) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000513") AnnotationAssertion(Annotation( "TAO:0000513") Annotation( ) "fast muscle cells somite 1") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000513") AnnotationAssertion(rdfs:label "obsolete fast muscle cell somite 1") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (periventricular grey zone) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000516") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000516") AnnotationAssertion(rdfs:label "periventricular grey zone") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (glossopharyngeal lobe) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000517") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000517") AnnotationAssertion(rdfs:label "glossopharyngeal lobe") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete horizontal commissure) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000520") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000520") AnnotationAssertion(rdfs:label "obsolete horizontal commissure") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (inferior hyohyoid) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000522") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000522") AnnotationAssertion(rdfs:label "inferior hyohyoid") SubClassOf( ) # Class: (inferior reticular formation) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000523") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000523") AnnotationAssertion(rdfs:label "inferior reticular formation") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (intermuscular bone) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Axial bone which is a segmental ossification that forms in the myoseptum.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000526") AnnotationAssertion(Annotation( "PSPUB:0000147") "métamyoste") AnnotationAssertion(Annotation( "PSPUB:0000153") "métaxymyoste") AnnotationAssertion(Annotation( "PSPUB:0000164"^^xsd:string) "os intermusculaire") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000526") AnnotationAssertion(rdfs:comment "Intermuscular bones are found in teleosts fishes only.") AnnotationAssertion(rdfs:label "intermuscular bone") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pharyngobranchial bone) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Endochondral bone of the branchial arches located medial to the epibranchials.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000527") AnnotationAssertion(Annotation( "TAO:0000527") "infrapharyngobranchial") AnnotationAssertion( "infrapharyngobranchial bone") AnnotationAssertion(Annotation( "TAO:0000527") Annotation( ) "pharyngobranchials") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000527") AnnotationAssertion(rdfs:label "pharyngobranchial bone") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lapillus) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000530") AnnotationAssertion(Annotation( "TAO:0000530") "utricular otolith") AnnotationAssertion(Annotation( "TAO:0000530") "utriculith") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000530") AnnotationAssertion(rdfs:label "lapillus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete lateral longitudinal fasciculus) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "UBERON:2000198") AnnotationAssertion( "ZFA:0000534") AnnotationAssertion(Annotation( "TAO:0000534") "lateral longitundinal fasciculus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000534") AnnotationAssertion(rdfs:label "obsolete lateral longitudinal fasciculus") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete lateral zone of D) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000536") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000536") AnnotationAssertion(rdfs:label "obsolete lateral zone of D") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (magnocellular octaval nucleus) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000540") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000540") AnnotationAssertion(rdfs:label "magnocellular octaval nucleus") SubClassOf( ) # Class: (obsolete marginal blastomere) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Cells (incompletely cleaved before the YSL forms), located at the surface just at the rim of the blastodisc, external to the deep blastomeres. Kimmel et al, 1995.") AnnotationAssertion( "ZFA:0000541") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000541") AnnotationAssertion(Annotation( "TAO:0000541") Annotation( ) "marginal blastomeres") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000541") AnnotationAssertion(rdfs:label "obsolete marginal blastomere") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (medial column) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000542") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000542") AnnotationAssertion(rdfs:label "medial column") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (posttemporal) AnnotationAssertion(Annotation( "TAO:GA_TG"^^xsd:string) "Dermal bone of the secondary pectoral girdle that attaches the girdle to the skull. Its dorsal process attaches to the epiotic or epioccipital, the ventral process to the intercalar and the body articulates with the supracleithrum. The postotic sensory canal or lateral line runs within or lateral to bone.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000549") AnnotationAssertion(Annotation( "TAO:0000549") "post-temporal") AnnotationAssertion(Annotation( "TAO:0000549") "postemporal") AnnotationAssertion(Annotation( "TAO:0000549") "posttemporale") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "TAO:0000549") "suprascapula") AnnotationAssertion( "UBERON:2000549") AnnotationAssertion(rdfs:comment "The posttemporal is commonly a Y-shaped bone with two elongate processes. The dorsal process may be equal or longer than the ventral process or the opposite. The ventral process may be absent in some teleosts.") AnnotationAssertion(rdfs:label "posttemporal") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) # Class: (opercular flap) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000555") AnnotationAssertion(Annotation( "TAO:0000555") "gill cover") AnnotationAssertion(Annotation( "TAO:0000555") "opercular apparatus") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "TAO:0000555") "operculum") AnnotationAssertion( "UBERON:2000555") AnnotationAssertion(rdfs:label "opercular flap") SubClassOf( ) # Class: (posterior macula) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Macula that is located in the developing posterior inner ear, and gives rise to the macula neglecta and the macula saccule. (See Anatomical Atlas entry for sensory patches of the ear by T. Whitfield.).") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000558") AnnotationAssertion(Annotation( "TAO:0000558") "pm") AnnotationAssertion(Annotation( "TAO:0000558") "posteromedial macula") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000558") AnnotationAssertion(rdfs:label "posterior macula") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (pelvic abductor profundus) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000564") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000564") AnnotationAssertion(rdfs:label "pelvic abductor profundus") SubClassOf( ) SubClassOf( ) # Class: (obsolete presumptive telencephalon) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000571") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000571") AnnotationAssertion(rdfs:label "obsolete presumptive telencephalon") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (internal cellular layer) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000573") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000573") AnnotationAssertion(rdfs:label "internal cellular layer") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pterotic) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Endochondral bone that articulates with the autosphenotic anteriorly, the parietal dorsomedially, the prootic ventrally (and the intercalar occasionally), and the epiotic and exoccipital posteriorly. The pterotic encloses the horizontal semicircular canal of the inner ear. The lower edge of the pterotic contributes to the hyomandibular facet. The pterotic is paired.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000576") AnnotationAssertion(Annotation( "TAO:0000576") "autopterotic") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000576") AnnotationAssertion(rdfs:label "pterotic") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) SubClassOf( ObjectSomeValuesFrom( )) # Class: (rostral mesencephalo-cerebellar tract) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000579") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000579") AnnotationAssertion(rdfs:label "rostral mesencephalo-cerebellar tract") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (rostral preglomerular nucleus) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000580") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000580") AnnotationAssertion(rdfs:label "rostral preglomerular nucleus") SubClassOf( ) # Class: (rostral tuberal nucleus) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000581") AnnotationAssertion(Annotation( "TAO:0000581") "anterior tuberal nucleus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000581") AnnotationAssertion(rdfs:label "rostral tuberal nucleus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (saccus dorsalis) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000582") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000582") AnnotationAssertion(rdfs:label "saccus dorsalis") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (kinethmoid cartilage) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Cranial cartilage which is a small median cartilage located between the premaxillae and anterodorsal to the ethmoid.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000585") AnnotationAssertion(Annotation( "TAO:0000585") "kinethmoideum cartilage") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000585") AnnotationAssertion(rdfs:label "kinethmoid cartilage") SubClassOf( ) # Class: (sphenotic) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Endochondral bone that sutures with the pterosphenoid anteriorly, the prootic ventrally, the frontal bone dorso-medially, and the pterotic dorso-posteriorly. Occasionally the sphenotic sutures with the parietal bone. The sphenotic separates the orbital from the otic region. The sphenotic bears a large antero-lateral or lateral or ventro-lateral process that borders the postero-dorsal margin of the orbit. The sphenotic is a paired bone.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000587") AnnotationAssertion(Annotation( "TAO:0000587") "autosphenotic") AnnotationAssertion(Annotation( "TAO:0000587") Annotation( ) "sphenotics") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000587") AnnotationAssertion(rdfs:comment "The lower edge of the sphenotic may contribute to the hyomandibular facet depending on the fish group.") AnnotationAssertion(rdfs:label "sphenotic") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (sulcus ypsiloniformis) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000589") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000589") AnnotationAssertion(rdfs:label "sulcus ypsiloniformis") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (superficial pelvic adductor) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000592") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000592") AnnotationAssertion(rdfs:label "superficial pelvic adductor") SubClassOf( ) SubClassOf( ) # Class: (superior reticular formation medial column) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000593") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000593") AnnotationAssertion(rdfs:label "superior reticular formation medial column") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (supracleithrum) AnnotationAssertion(Annotation( "TAO:GA_TG"^^xsd:string) Annotation( "TAO:wd"^^xsd:string) "Dermal bone that articulates dorsally with the posttemporal and ventrally with the cleithrum. Supracleithrum is part of the secondary pectoral girdle and commonly, carries part of the lateral line canal.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000594") AnnotationAssertion(Annotation( "PSPUB:0000131") "hypercleithrum") AnnotationAssertion(Annotation( "TAO:0000594") Annotation( ) "supracleithra") AnnotationAssertion(Annotation( "PSPUB:0000164"^^xsd:string) "supracleithrum") AnnotationAssertion(Annotation( "PSPUB:0000132") "épiclithrum") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000594") AnnotationAssertion(rdfs:comment "The dorsalmost postcleithrum or postcleithrum 1 may lie medial to the ventral part of the supracleithrum. The postotic canal or lateral line may run close to the dorsal margin or in the upper third or in the lowest third of the bone depending on the fish group.") AnnotationAssertion(rdfs:label "supracleithrum") SubClassOf( ) SubClassOf( ) # Class: (telencephalic tracts) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000597") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000597") AnnotationAssertion(rdfs:label "telencephalic tracts") SubClassOf( ) # Class: (torus semicircularis) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000599") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000599") AnnotationAssertion(rdfs:label "torus semicircularis") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete pretectal periventricular nucleus) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000601") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000601") AnnotationAssertion(rdfs:label "obsolete pretectal periventricular nucleus") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete ventral oblique branchial muscle) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000606") AnnotationAssertion(Annotation( "TAO:0000606") Annotation( ) "ventral oblique branchial muscles") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000606") AnnotationAssertion(rdfs:comment "removed axiom: part_of some 'pharyngeal muscle' no information about this class, may be zebrafish specific nomenclature.") AnnotationAssertion(rdfs:label "obsolete ventral oblique branchial muscle") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete ventral rhombencephalic commissure brain stem) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000607") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000607") AnnotationAssertion(rdfs:label "obsolete ventral rhombencephalic commissure brain stem") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (ventral transverse) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000608") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000608") AnnotationAssertion(rdfs:label "ventral transverse") SubClassOf( ) # Class: (ventrolateral nucleus) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000609") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000609") AnnotationAssertion(rdfs:label "ventrolateral nucleus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (vertical myoseptum) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Connective tissue partitions developing between the myotomes. Kimmel et al, 1995.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000610") AnnotationAssertion(Annotation( "TAO:0000610") "transverse myoseptum") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000610") AnnotationAssertion(rdfs:label "vertical myoseptum") SubClassOf( ) # Class: (visceromotor column) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000611") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000611") AnnotationAssertion(rdfs:label "visceromotor column") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (abductor profundus) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000614") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000614") AnnotationAssertion(rdfs:label "abductor profundus") SubClassOf( ) SubClassOf( ) # Class: (adductor arcus palatini) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000615") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000615") AnnotationAssertion(rdfs:label "adductor arcus palatini") SubClassOf( ) # Class: (adductor profundus) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000616") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000616") AnnotationAssertion(rdfs:label "adductor profundus") SubClassOf( ) SubClassOf( ) # Class: (obsolete ansulate commissure) AnnotationAssertion(Annotation( ) "A brainstem commissure that contains major crossed descending projections from both tectal lobes.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000618") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000618") AnnotationAssertion(rdfs:comment "This class is present in fishes and amphibians.") AnnotationAssertion(rdfs:label "obsolete ansulate commissure") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (barbel) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Surface structure which is a tactile structure found in the branchial region. Barbels are covered with epidermis rich in taste buds, and are innervated by branches of the cranial nerves.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000622") AnnotationAssertion(Annotation( "TAO:0000622") Annotation( ) "barbels") AnnotationAssertion(Annotation( "TAO:0000622") "barble") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000622") AnnotationAssertion(rdfs:label "barbel") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (basipterygium bone) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "Basipterygium element that is composed of bone tissue.") AnnotationAssertion( "ZFA:0000623") AnnotationAssertion(Annotation( "TAO:0000623") Annotation( ) "basipterygia") AnnotationAssertion(Annotation( "PSPUB:0000145") "basipterygium ischiatique") AnnotationAssertion(Annotation( "PSPUB:0000164"^^xsd:string) "os pelvien") AnnotationAssertion( "pelvic plate") AnnotationAssertion( "pubic plate") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "TAO:0000623") "pelvic bone") AnnotationAssertion( "UBERON:2000623") AnnotationAssertion(rdfs:label "basipterygium bone") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete brachium conjunctivum) AnnotationAssertion( "UBERON:0002150") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000624") AnnotationAssertion(Annotation( "TAO:0000624") "brachium conjunctivium") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000624") AnnotationAssertion(rdfs:label "obsolete brachium conjunctivum") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete bulbo-spinal tract) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000626") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000626") AnnotationAssertion(rdfs:label "obsolete bulbo-spinal tract") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (posterior ceratohyal) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Replacement bone that is bilaterally paired and articulates anteriorly with the anterior ceratohyal.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000627") AnnotationAssertion(Annotation( "TAO:0000627") "caudal ceratohyal") AnnotationAssertion(Annotation( "TAO:0000627") "epihyal") AnnotationAssertion(Annotation( "TAO:0000627") "posterohyal") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "TAO:0000627") "proximal ceratohyal") AnnotationAssertion( "UBERON:2000627") AnnotationAssertion(rdfs:comment "Posterohyal is used in Rapp Py Daniel (1997).") AnnotationAssertion(rdfs:label "posterior ceratohyal") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) SubClassOf( ObjectSomeValuesFrom( )) # Class: (caudal motor nucleus of abducens) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "Caudal part of the abducens nucleus that mediates motor function.") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000629") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000629") AnnotationAssertion(rdfs:label "caudal motor nucleus of abducens") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (caudal parvocellular preoptic nucleus) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000630") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000630") AnnotationAssertion(rdfs:label "caudal parvocellular preoptic nucleus") SubClassOf( ) SubClassOf( ) # Class: (caudal tuberculum) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000633") AnnotationAssertion(Annotation( "TAO:0000633") "posterior tubercle") AnnotationAssertion(Annotation( "TAO:0000633") "posterior tuberculum") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000633") AnnotationAssertion(rdfs:label "caudal tuberculum") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (caudal zone of median tuberal portion of hypothalamus) AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000634") AnnotationAssertion(rdfs:label "caudal zone of median tuberal portion of hypothalamus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete central pretectal nucleus) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000635") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000635") AnnotationAssertion(rdfs:label "obsolete central pretectal nucleus") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (cerebellar crest) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000636") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000636") AnnotationAssertion(rdfs:label "cerebellar crest") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (commissura rostral, pars dorsalis) AnnotationAssertion(Annotation( "ISBN:3764351209") "Part of the anterior commissure which is located immediately ventral to the supracommissural nucleus of area ventralis telencephali.") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000638") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000638") AnnotationAssertion(rdfs:label "commissura rostral, pars dorsalis") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (commissure of the secondary gustatory nuclei) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000639") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000639") AnnotationAssertion(rdfs:label "commissure of the secondary gustatory nuclei") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete decussation of the medial octavolateralis nucleus) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000642") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000642") AnnotationAssertion(rdfs:label "obsolete decussation of the medial octavolateralis nucleus") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (rostral cerebellar tract) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000643") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000643") AnnotationAssertion(rdfs:label "rostral cerebellar tract") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete dental plate) AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000644") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000644") AnnotationAssertion(rdfs:comment "obsoleted because was artificially generalized from zebrafish, wherein it is currently obsolete.") AnnotationAssertion(rdfs:label "obsolete dental plate") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (descending octaval nucleus) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000645") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000645") AnnotationAssertion(rdfs:label "descending octaval nucleus") SubClassOf( ) # Class: (dorsal caudal thalamic nucleus) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000647") AnnotationAssertion(Annotation( "TAO:0000647") "dorsal posterior thalamic nucleus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000647") AnnotationAssertion(rdfs:label "dorsal caudal thalamic nucleus") SubClassOf( ) # Class: (dorsal pelvic arrector) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000651") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000651") AnnotationAssertion(rdfs:label "dorsal pelvic arrector") SubClassOf( ) SubClassOf( ) # Class: (rostral motor nucleus of abducens) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "Rostral part of the abducens nucleus that mediates motor function.") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000654") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000654") AnnotationAssertion(rdfs:label "rostral motor nucleus of abducens") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete dorsomedial optic tract) AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000655") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000655") AnnotationAssertion(rdfs:comment "removed axiom: white matter and part_of some 'optic tract'. Not clear that directional labels for optic tract parts are consistent across taxa. To be reviewed.") AnnotationAssertion(rdfs:label "obsolete dorsomedial optic tract") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (entopterygoid) AnnotationAssertion(Annotation( "TAO:GA_TG"^^xsd:string) "Dermal bone that forms the ventro-medial part of the palate and the antero-ventral and ventral wall of the orbit. The entopterygoid is a paired bone.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000657") AnnotationAssertion( "endopterygoid bone") AnnotationAssertion(Annotation( "TAO:0000657") "mesopterygoid") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000657") AnnotationAssertion(rdfs:label "entopterygoid") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (epibranchial bone) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Dorsal branchial arch bone that is bilaterally paired and articulates laterally with ceratobranchial cartilage or bone and medially with pharyngobranchial cartilage or bone.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000658") AnnotationAssertion(Annotation( "TAO:0000658") Annotation( ) "epibranchial bones") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000658") AnnotationAssertion(rdfs:label "epibranchial bone") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (external pharyngoclavicularis) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000662") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000662") AnnotationAssertion(rdfs:label "external pharyngoclavicularis") SubClassOf( ) # Class: (extrascapula) AnnotationAssertion(Annotation( "TAO:GA_TG"^^xsd:string) Annotation( "TAO:wd"^^xsd:string) "Dermal canal-bearing bone placed at the dorso-posterior region of the skull roof, lying on the posterior region of the pterotic and parietals, or the pterotic and epioccipital, or on the pterotic, epioccipital and occipital bones.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "UBERON:2001413") AnnotationAssertion( "ZFA:0000663") AnnotationAssertion(Annotation( "TAO:0000663") "extrascapular") AnnotationAssertion(Annotation( "TAO:0000663") "extrascapular bone") AnnotationAssertion(Annotation( "TAO:0000663") "scale bone") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "TAO:0000663") "supratemporal") AnnotationAssertion(Annotation( "TAO:Harrington_1955") Annotation( "TAO:Weitzman_1962") "tabular") AnnotationAssertion( "UBERON:2000663") AnnotationAssertion(rdfs:comment "When it is present, the paired series of extrascapular bones may include one pair or two pairs or two pairs plus a median one. The most lateral is named lateral extrascapula and is the bone where the intersection of the otic, postotic and extrascapular or supratemporal canals occur. The medial and median extrascapulars carry the extrascapular or supratemporal canal.") AnnotationAssertion(rdfs:label "extrascapula") SubClassOf( ) SubClassOf( ) # Class: (hypobranchial artery) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "A pair of HA are connect one to each AA1. They run rostromedially until at the extreme rostro-ventral midline the two vessels merge and then run straight caudally along the ventral midline until they reach the cranial end of the ventral aorta (VA). There, the single HA passes just dorsal to the rostral end of the VA and then immediately splits again into a pair of HA. The paired HA continue caudally just to either side of the ventral midline. The HA provide blood supply to the ventral branchial region and the heart.sogai et al. 2001.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000673") AnnotationAssertion(Annotation( "TAO:0000673") "HA") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000673") AnnotationAssertion(rdfs:label "hypobranchial artery") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (interopercle) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Dermal bone that is part of the opercular series. It is located ventro-medially to the preopercle and anterior to the subopercle. It is joined to the posterior part of the lower jaw (retroarticular) by a ligament. The interopercle is paired.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000674") AnnotationAssertion(Annotation( "TAO:0000674") Annotation( ) "interopercles") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000674") AnnotationAssertion(rdfs:label "interopercle") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) # Class: (sagitta) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000676") AnnotationAssertion(Annotation( "TAO:0000676") "saccular otolith") AnnotationAssertion(Annotation( "TAO:0000676") "sacculith") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000676") AnnotationAssertion(rdfs:label "sagitta") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (segmental intercostal artery) AnnotationAssertion( "EFO:0003558") AnnotationAssertion( "TAO:0000677") AnnotationAssertion( "ZFA:0000677") AnnotationAssertion(Annotation( "TAO:0000677") Annotation( ) "segmental intercostal arteries") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000677") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "segmental intercostal artery") SubClassOf( ) # Class: (obsolete hair cell anterior macula) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Specialized neuronal receptor cells of the lateral line and acoustico-vestibular systems. Kimmel et al, 1995. (Also see Anatomical Atlas entry for hair cells by T. Whitfield.).") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000678") AnnotationAssertion(Annotation( "TAO:0000678") Annotation( ) "sensory hair cells anterior macula") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000678") AnnotationAssertion(rdfs:label "obsolete hair cell anterior macula") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (superficial abductor) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000685") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000685") AnnotationAssertion(rdfs:label "superficial abductor") SubClassOf( ) SubClassOf( ) # Class: (superficial pretectum) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000687") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000687") AnnotationAssertion(rdfs:label "superficial pretectum") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete olfactory support cell) AnnotationAssertion( "CL:0000853") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000688") AnnotationAssertion(Annotation( "TAO:0000688") Annotation( ) "support cells") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000688") AnnotationAssertion(rdfs:label "obsolete olfactory support cell") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete supracommissural nucleus of V) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000689") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000689") AnnotationAssertion(rdfs:label "obsolete supracommissural nucleus of V") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete supraoptic commissure) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000690") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000690") AnnotationAssertion(rdfs:label "obsolete supraoptic commissure") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (supraorbital bone) AnnotationAssertion(Annotation( "TAO:GA_TG"^^xsd:string) "Dermal bone that is part of the dorsal or upper border or antero-dorsal border of the orbit. The supraorbital bone may contact the orbital margin of the frontal bone medially, the antorbital antero-ventrally and the dermosphenotic posteriorly. The supraorbital bone does not carry sensory canals. The supraorbital bone is paired.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000691") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000691") AnnotationAssertion(rdfs:comment "The supraorbital bone may be present as two or one bone in extant teleosts, although many of the advanced forms lack the bone.") AnnotationAssertion(rdfs:label "supraorbital bone") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (symplectic) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Replacement bone that is bilaterally paired and articulates with the hyomandibula and the quadrate.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000692") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000692") AnnotationAssertion(rdfs:comment "When the interhyal bone or cartilage is present it articulates at the articulation of the hyomandibula and symplectic.") AnnotationAssertion(rdfs:label "symplectic") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) SubClassOf( ObjectSomeValuesFrom( )) # Class: (tangential nucleus) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000693") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000693") AnnotationAssertion(rdfs:label "tangential nucleus") SubClassOf( ) # Class: (labial cavities) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000695") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000695") AnnotationAssertion(rdfs:label "labial cavities") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (entopterygoid vertical strut) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Process that is the dorsally directed, vertical process of the entopterygoid. The strut sometimes articulates with the orbitosphenoid.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion(Annotation( "TAO:0000699") "endopterygoid vertical strut") AnnotationAssertion(Annotation( "TAO:0000699") "mesopterygoid vertical strut") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000699") AnnotationAssertion(rdfs:comment "Fink and Fink 1981, present in gymnotoids.") AnnotationAssertion(rdfs:label "entopterygoid vertical strut") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (ventral arrector) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000701") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000701") AnnotationAssertion(rdfs:label "ventral arrector") SubClassOf( ) SubClassOf( ) # Class: (ventral motor nucleus trigeminal nerve) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000703") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000703") AnnotationAssertion(rdfs:label "ventral motor nucleus trigeminal nerve") SubClassOf( ) # Class: (ventral pelvic arrector) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000704") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000704") AnnotationAssertion(rdfs:label "ventral pelvic arrector") SubClassOf( ) SubClassOf( ) # Class: (ventral zone) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000707") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000707") AnnotationAssertion(rdfs:label "ventral zone") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete ventrolateral optic tract) AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000708") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000708") AnnotationAssertion(rdfs:comment "removed axiom: part_of some 'optic tract' Not clear that directional labels for optic tract parts are consistent across taxa. To be reviewed.") AnnotationAssertion(rdfs:label "obsolete ventrolateral optic tract") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (viscerosensory commissural nucleus of Cajal) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000710") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000710") AnnotationAssertion(rdfs:label "viscerosensory commissural nucleus of Cajal") SubClassOf( ) # Class: (DEL) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "A multilayer of deep cells of fairly uniform thickness that forms during early epiboly (at dome stage; upon conversion of the blastodisc to the blastoderm); during gastrulation the DEL (deep cell layer) gives rise to the epiblast and hypoblast. Kimmel et al, 1995.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000711") AnnotationAssertion(Annotation( "TAO:0000711") Annotation( ) "DEL cells") AnnotationAssertion(Annotation( "ZFIN:ZDB-PUB-961014-576"^^xsd:string) "deep cell layer") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000711") AnnotationAssertion(rdfs:label "DEL") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (internal yolk syncytial layer) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "The portion of the YSL that lies deep to the blastoderm during epiboly. Kimmel et al, 1995.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000712") AnnotationAssertion(Annotation( "ZFIN:ZDB-PUB-961014-576"^^xsd:string) "I-YSL") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000712") AnnotationAssertion(rdfs:label "internal yolk syncytial layer") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete accessory pretectal nucleus) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000714") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000714") AnnotationAssertion(rdfs:label "obsolete accessory pretectal nucleus") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (adductor hyohyoid) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000715") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000715") AnnotationAssertion(rdfs:label "adductor hyohyoid") SubClassOf( ) # Class: (epaxial region somite 27) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "The epaxial region of somite 27 derived body wall muscle. The epaxial region is dorsal to the horizontal myoseptum. Kimmel et al, 1995.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000718") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000718") AnnotationAssertion(rdfs:label "epaxial region somite 27") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete slow muscle cell somite 21) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000719") AnnotationAssertion(Annotation( "TAO:0000719") Annotation( ) "slow muscle cells somite 21") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000719") AnnotationAssertion(rdfs:label "obsolete slow muscle cell somite 21") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete slow muscle cell somite 24) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000720") AnnotationAssertion(Annotation( "TAO:0000720") Annotation( ) "slow muscle cells somite 24") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000720") AnnotationAssertion(rdfs:label "obsolete slow muscle cell somite 24") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete slow muscle cell somite 27) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000721") AnnotationAssertion(Annotation( "TAO:0000721") Annotation( ) "slow muscle cells somite 27") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000721") AnnotationAssertion(rdfs:label "obsolete slow muscle cell somite 27") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete slow muscle cell somite 3) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000722") AnnotationAssertion(Annotation( "TAO:0000722") Annotation( ) "slow muscle cells somite 3") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000722") AnnotationAssertion(rdfs:label "obsolete slow muscle cell somite 3") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete slow muscle cell somite 5) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000723") AnnotationAssertion(Annotation( "TAO:0000723") Annotation( ) "slow muscle cells somite 5") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000723") AnnotationAssertion(rdfs:label "obsolete slow muscle cell somite 5") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete slow muscle cell somite 8) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000724") AnnotationAssertion(Annotation( "TAO:0000724") Annotation( ) "slow muscle cells somite 8") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000724") AnnotationAssertion(rdfs:label "obsolete slow muscle cell somite 8") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (somite 11) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Undifferentiated mesodermal component of early trunk segment 11 or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome. Kimmel et al, 1995.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "11"^^xsd:nonNegativeInteger) AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000725") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000725") AnnotationAssertion(rdfs:label "somite 11") SubClassOf( ) # Class: (somite 14) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Undifferentiated mesodermal component of early trunk segment 14 or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome. Kimmel et al, 1995.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "14"^^xsd:nonNegativeInteger) AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000726") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000726") AnnotationAssertion(rdfs:label "somite 14") SubClassOf( ) # Class: (somite 17) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Undifferentiated mesodermal component of early trunk segment 17 or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome. Kimmel et al, 1995.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "17"^^xsd:nonNegativeInteger) AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000727") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000727") AnnotationAssertion(rdfs:label "somite 17") SubClassOf( ) # Class: (somite 2) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Undifferentiated mesodermal component of early trunk segment 2 or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome. Kimmel et al, 1995.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "2"^^xsd:nonNegativeInteger) AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000728") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000728") AnnotationAssertion(rdfs:label "somite 2") SubClassOf( ) # Class: (epaxial region somite 3) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "The epaxial region of somite 3 derived body wall muscle. The epaxial region is dorsal to the horizontal myoseptum. Kimmel et al, 1995.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000729") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000729") AnnotationAssertion(rdfs:label "epaxial region somite 3") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (somite 23) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Undifferentiated mesodermal component of early tail segment 23 or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome. Kimmel et al, 1995.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "23"^^xsd:nonNegativeInteger) AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000730") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000730") AnnotationAssertion(rdfs:label "somite 23") SubClassOf( ) # Class: (somite 27) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Undifferentiated mesodermal component of early tail segment 27 or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome. Kimmel et al, 1995.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "27"^^xsd:nonNegativeInteger) AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000731") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000731") AnnotationAssertion(rdfs:label "somite 27") SubClassOf( ) # Class: (somite 3) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Undifferentiated mesodermal component of early trunk segment 3 or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome. Kimmel et al, 1995.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "3"^^xsd:nonNegativeInteger) AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000732") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000732") AnnotationAssertion(rdfs:label "somite 3") SubClassOf( ) # Class: (somite 7) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Undifferentiated mesodermal component of early trunk segment 7 or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome. Kimmel et al, 1995.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "7"^^xsd:nonNegativeInteger) AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000733") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000733") AnnotationAssertion(rdfs:label "somite 7") SubClassOf( ) # Class: (epaxial region somite 11) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "The epaxial region of somite 11 derived body wall muscle. The epaxial region is dorsal to the horizontal myoseptum. Kimmel et al, 1995.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000739") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000739") AnnotationAssertion(rdfs:label "epaxial region somite 11") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (epaxial region somite 5) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "The epaxial region of somite 5 derived body wall muscle. The epaxial region is dorsal to the horizontal myoseptum. Kimmel et al, 1995.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000740") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000740") AnnotationAssertion(rdfs:label "epaxial region somite 5") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (epaxial region somite 14) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "The epaxial region of somite 14 derived body wall muscle. The epaxial region is dorsal to the horizontal myoseptum. Kimmel et al, 1995.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000741") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000741") AnnotationAssertion(rdfs:label "epaxial region somite 14") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (epaxial region somite 17) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "The epaxial region of somite 17 derived body wall muscle. The epaxial region is dorsal to the horizontal myoseptum. Kimmel et al, 1995.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000742") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000742") AnnotationAssertion(rdfs:label "epaxial region somite 17") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (epaxial region somite 2) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "The epaxial region of somite 2 derived body wall muscle. The epaxial region is dorsal to the horizontal myoseptum. Kimmel et al, 1995.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000743") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000743") AnnotationAssertion(rdfs:label "epaxial region somite 2") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (epaxial region somite 22) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "The epaxial region of somite 22 derived body wall muscle. The epaxial region is dorsal to the horizontal myoseptum. Kimmel et al, 1995.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000744") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000744") AnnotationAssertion(rdfs:label "epaxial region somite 22") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (epaxial region somite 25) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "The epaxial region of somite 25 derived body wall muscle. The epaxial region is dorsal to the horizontal myoseptum. Kimmel et al, 1995.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000745") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000745") AnnotationAssertion(rdfs:label "epaxial region somite 25") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (epaxial region somite 28) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "The epaxial region of somite 28 derived body wall muscle. The epaxial region is dorsal to the horizontal myoseptum. Kimmel et al, 1995.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000746") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000746") AnnotationAssertion(rdfs:label "epaxial region somite 28") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (epaxial region somite 30) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "The epaxial region of somite 30 derived body wall muscle. The epaxial region is dorsal to the horizontal myoseptum. Kimmel et al, 1995.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000747") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000747") AnnotationAssertion(rdfs:label "epaxial region somite 30") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (epaxial region somite 6) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "The epaxial region of somite 6 derived body wall muscle. The epaxial region is dorsal to the horizontal myoseptum. Kimmel et al, 1995.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000748") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000748") AnnotationAssertion(rdfs:label "epaxial region somite 6") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (epaxial region somite 9) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "The epaxial region of somite 9 derived body wall muscle. The epaxial region is dorsal to the horizontal myoseptum. Kimmel et al, 1995.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000749") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000749") AnnotationAssertion(rdfs:label "epaxial region somite 9") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete fast muscle cell somite 10) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000750") AnnotationAssertion(Annotation( "TAO:0000750") Annotation( ) "fast muscle cells somite 10") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000750") AnnotationAssertion(rdfs:label "obsolete fast muscle cell somite 10") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (epaxial region somite 8) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "The epaxial region of somite 8 derived body wall muscle. The epaxial region is dorsal to the horizontal myoseptum. Kimmel et al, 1995.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000751") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000751") AnnotationAssertion(rdfs:label "epaxial region somite 8") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete fast muscle cell somite 13) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000752") AnnotationAssertion(Annotation( "TAO:0000752") Annotation( ) "fast muscle cells somite 13") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000752") AnnotationAssertion(rdfs:label "obsolete fast muscle cell somite 13") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete fast muscle cell somite 16) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000753") AnnotationAssertion(Annotation( "TAO:0000753") Annotation( ) "fast muscle cells somite 16") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000753") AnnotationAssertion(rdfs:label "obsolete fast muscle cell somite 16") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete fast muscle cell somite 19) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000754") AnnotationAssertion(Annotation( "TAO:0000754") Annotation( ) "fast muscle cells somite 19") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000754") AnnotationAssertion(rdfs:label "obsolete fast muscle cell somite 19") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete fast muscle cell somite 21) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000755") AnnotationAssertion(Annotation( "TAO:0000755") Annotation( ) "fast muscle cells somite 21") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000755") AnnotationAssertion(rdfs:label "obsolete fast muscle cell somite 21") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete fast muscle cell somite 24) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000756") AnnotationAssertion(Annotation( "TAO:0000756") Annotation( ) "fast muscle cells somite 24") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000756") AnnotationAssertion(rdfs:label "obsolete fast muscle cell somite 24") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete fast muscle cell somite 27) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000757") AnnotationAssertion(Annotation( "TAO:0000757") Annotation( ) "fast muscle cells somite 27") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000757") AnnotationAssertion(rdfs:label "obsolete fast muscle cell somite 27") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete fast muscle cell somite 3) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000758") AnnotationAssertion(Annotation( "TAO:0000758") Annotation( ) "fast muscle cells somite 3") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000758") AnnotationAssertion(rdfs:label "obsolete fast muscle cell somite 3") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete fast muscle cell somite 5) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000759") AnnotationAssertion(Annotation( "TAO:0000759") Annotation( ) "fast muscle cells somite 5") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000759") AnnotationAssertion(rdfs:label "obsolete fast muscle cell somite 5") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete fast muscle cell somite 8) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000760") AnnotationAssertion(Annotation( "TAO:0000760") Annotation( ) "fast muscle cells somite 8") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000760") AnnotationAssertion(rdfs:label "obsolete fast muscle cell somite 8") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (hypaxial region somite 11) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "The hypaxial region of somite 11 derived body wall muscle. The hypaxial region is ventral to the horizontal myoseptum. Kimmel et al, 1995.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000767") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000767") AnnotationAssertion(rdfs:label "hypaxial region somite 11") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (hypaxial region somite 14) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "The hypaxial region of somite 14 derived body wall muscle. The hypaxial region is ventral to the horizontal myoseptum. Kimmel et al, 1995.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000768") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000768") AnnotationAssertion(rdfs:label "hypaxial region somite 14") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (hypaxial region somite 17) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "The hypaxial region of somite 17 derived body wall muscle. The hypaxial region is ventral to the horizontal myoseptum. Kimmel et al, 1995.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000769") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000769") AnnotationAssertion(rdfs:label "hypaxial region somite 17") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (hypaxial region somite 2) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "The hypaxial region of somite 2 derived body wall muscle. The hypaxial region is ventral to the horizontal myoseptum. Kimmel et al, 1995.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000770") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000770") AnnotationAssertion(rdfs:label "hypaxial region somite 2") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (hypaxial region somite 22) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "The hypaxial region of somite 22 derived body wall muscle. The hypaxial region is ventral to the horizontal myoseptum. Kimmel et al, 1995.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000771") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000771") AnnotationAssertion(rdfs:label "hypaxial region somite 22") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (hypaxial region somite 25) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "The hypaxial region of somite 25 derived body wall muscle. The hypaxial region is ventral to the horizontal myoseptum. Kimmel et al, 1995.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000772") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000772") AnnotationAssertion(rdfs:label "hypaxial region somite 25") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete fast muscle cell somite 12) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000773") AnnotationAssertion(Annotation( "TAO:0000773") Annotation( ) "fast muscle cells somite 12") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000773") AnnotationAssertion(rdfs:label "obsolete fast muscle cell somite 12") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (hypaxial region somite 28) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "The hypaxial region of somite 28 derived body wall muscle. The hypaxial region is ventral to the horizontal myoseptum. Kimmel et al, 1995.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000774") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000774") AnnotationAssertion(rdfs:label "hypaxial region somite 28") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (hypaxial region somite 30) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "The hypaxial region of somite 30 derived body wall muscle. The hypaxial region is ventral to the horizontal myoseptum. Kimmel et al, 1995.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000775") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000775") AnnotationAssertion(rdfs:label "hypaxial region somite 30") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (hypaxial region somite 6) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "The hypaxial region of somite 6 derived body wall muscle. The hypaxial region is ventral to the horizontal myoseptum. Kimmel et al, 1995.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000776") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000776") AnnotationAssertion(rdfs:label "hypaxial region somite 6") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (hypaxial region somite 9) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "The hypaxial region of somite 9 derived body wall muscle. The hypaxial region is ventral to the horizontal myoseptum. Kimmel et al, 1995.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000777") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000777") AnnotationAssertion(rdfs:label "hypaxial region somite 9") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete interneuron spinal cord) AnnotationAssertion( "CL:0005000") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000778") AnnotationAssertion(Annotation( "TAO:0000778") Annotation( ) "interneurons spinal cord") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000778") AnnotationAssertion(rdfs:label "obsolete interneuron spinal cord") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (lateral forebrain bundle telencephalon) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000779") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000779") AnnotationAssertion(rdfs:label "lateral forebrain bundle telencephalon") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete fast muscle cell somite 15) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000784") AnnotationAssertion(Annotation( "TAO:0000784") Annotation( ) "fast muscle cells somite 15") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000784") AnnotationAssertion(rdfs:label "obsolete fast muscle cell somite 15") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete muscle pioneer somite 10) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000790") AnnotationAssertion(Annotation( "TAO:0000790") Annotation( ) "muscle pioneers somite 10") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000790") AnnotationAssertion(rdfs:label "obsolete muscle pioneer somite 10") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete muscle pioneer somite 13) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000791") AnnotationAssertion(Annotation( "TAO:0000791") Annotation( ) "muscle pioneers somite 13") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000791") AnnotationAssertion(rdfs:label "obsolete muscle pioneer somite 13") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete muscle pioneer somite 16) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000792") AnnotationAssertion(Annotation( "TAO:0000792") Annotation( ) "muscle pioneers somite 16") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000792") AnnotationAssertion(rdfs:label "obsolete muscle pioneer somite 16") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete muscle pioneer somite 19) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000793") AnnotationAssertion(Annotation( "TAO:0000793") Annotation( ) "muscle pioneers somite 19") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000793") AnnotationAssertion(rdfs:label "obsolete muscle pioneer somite 19") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete muscle pioneer somite 22) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000794") AnnotationAssertion(Annotation( "TAO:0000794") Annotation( ) "muscle pioneers somite 22") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000794") AnnotationAssertion(rdfs:label "obsolete muscle pioneer somite 22") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete fast muscle cell somite 18) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000795") AnnotationAssertion(Annotation( "TAO:0000795") Annotation( ) "fast muscle cells somite 18") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000795") AnnotationAssertion(rdfs:label "obsolete fast muscle cell somite 18") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete muscle pioneer somite 25) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000796") AnnotationAssertion(Annotation( "TAO:0000796") Annotation( ) "muscle pioneers somite 25") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000796") AnnotationAssertion(rdfs:label "obsolete muscle pioneer somite 25") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete muscle pioneer somite 28) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000797") AnnotationAssertion(Annotation( "TAO:0000797") Annotation( ) "muscle pioneers somite 28") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000797") AnnotationAssertion(rdfs:label "obsolete muscle pioneer somite 28") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete muscle pioneer somite 30) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000798") AnnotationAssertion(Annotation( "TAO:0000798") Annotation( ) "muscle pioneers somite 30") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000798") AnnotationAssertion(rdfs:label "obsolete muscle pioneer somite 30") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete muscle pioneer somite 6) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000799") AnnotationAssertion(Annotation( "TAO:0000799") Annotation( ) "muscle pioneers somite 6") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000799") AnnotationAssertion(rdfs:label "obsolete muscle pioneer somite 6") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete muscle pioneer somite 9) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000800") AnnotationAssertion(Annotation( "TAO:0000800") Annotation( ) "muscle pioneers somite 9") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000800") AnnotationAssertion(rdfs:label "obsolete muscle pioneer somite 9") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (myotome somite 11) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Portion of somite 11 that gives rise to body wall muscle masses. Kimmel et al, 1995.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000801") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000801") AnnotationAssertion(rdfs:label "myotome somite 11") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (myotome somite 15) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Portion of somite 15 that gives rise to body wall muscle masses. Kimmel et al, 1995.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000802") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000802") AnnotationAssertion(rdfs:label "myotome somite 15") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (myotome somite 18) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Portion of somite 18 that gives rise to body wall muscle masses. Kimmel et al, 1995.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000803") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000803") AnnotationAssertion(rdfs:label "myotome somite 18") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (myotome somite 20) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Portion of somite 20 that gives rise to body wall muscle masses. Kimmel et al, 1995.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000804") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000804") AnnotationAssertion(rdfs:label "myotome somite 20") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (myotome somite 23) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Portion of somite 23 that gives rise to body wall muscle masses. Kimmel et al, 1995.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000805") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000805") AnnotationAssertion(rdfs:label "myotome somite 23") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete fast muscle cell somite 20) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000806") AnnotationAssertion(Annotation( "TAO:0000806") Annotation( ) "fast muscle cells somite 20") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000806") AnnotationAssertion(rdfs:label "obsolete fast muscle cell somite 20") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (myotome somite 26) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Portion of somite 26 that gives rise to body wall muscle masses. Kimmel et al, 1995.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000807") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000807") AnnotationAssertion(rdfs:label "myotome somite 26") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (myotome somite 29) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Portion of somite 29 that gives rise to body wall muscle masses. Kimmel et al, 1995.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000808") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000808") AnnotationAssertion(rdfs:label "myotome somite 29") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (myotome somite 4) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Portion of somite 4 that gives rise to body wall muscle masses. Kimmel et al, 1995.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000809") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000809") AnnotationAssertion(rdfs:label "myotome somite 4") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (myotome somite 7) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Portion of somite 7 that gives rise to body wall muscle masses. Kimmel et al, 1995.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000810") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000810") AnnotationAssertion(rdfs:label "myotome somite 7") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (nucleus of medial longitudinal fasciculus of medulla) AnnotationAssertion( "EFO:0003577") AnnotationAssertion( "TAO:0000815") AnnotationAssertion( "ZFA:0000815") AnnotationAssertion(Annotation( ) "nucleus of MLF medulla") AnnotationAssertion(Annotation( "ZFA:0000815") "nucleus of the medial longitudinal fasciculus medulla oblongata") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000815") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "nucleus of medial longitudinal fasciculus of medulla") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) # Class: (obsolete fast muscle cell somite 23) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000817") AnnotationAssertion(Annotation( "TAO:0000817") Annotation( ) "fast muscle cells somite 23") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000817") AnnotationAssertion(rdfs:label "obsolete fast muscle cell somite 23") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete postcommissural nucleus of V central entopeduncular nucleus) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000819") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000819") AnnotationAssertion(rdfs:label "obsolete postcommissural nucleus of V central entopeduncular nucleus") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (presumptive neuron neural tube) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000820") AnnotationAssertion(Annotation( "TAO:0000820") Annotation( ) "presumptive neurons neural tube") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000820") AnnotationAssertion(rdfs:label "presumptive neuron neural tube") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete primary neuron hindbrain) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000821") AnnotationAssertion(Annotation( "TAO:0000821") Annotation( ) "primary neurons hindbrain") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000821") AnnotationAssertion(rdfs:label "obsolete primary neuron hindbrain") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (central nucleus torus semicircularis) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000826") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000826") AnnotationAssertion(rdfs:label "central nucleus torus semicircularis") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete fast muscle cell somite 26) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000827") AnnotationAssertion(Annotation( "TAO:0000827") Annotation( ) "fast muscle cells somite 26") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000827") AnnotationAssertion(rdfs:label "obsolete fast muscle cell somite 26") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (sclerotome somite 11) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Ventromedial region of somite 11 that will form vertebral cartilages and connective tissues. The sclerotome lies ventral to the myotome. Cells of the sclerotome will migrate dorsally to surround the notochord and neural tube. Kimmel et al, 1995.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000829") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000829") AnnotationAssertion(rdfs:label "sclerotome somite 11") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (sclerotome somite 14) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Ventromedial region of somite 14 that will form vertebral cartilages and connective tissues. The sclerotome lies ventral to the myotome. Cells of the sclerotome will migrate dorsally to surround the notochord and neural tube. Kimmel et al, 1995.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000830") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000830") AnnotationAssertion(rdfs:label "sclerotome somite 14") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (sclerotome somite 17) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Ventromedial region of somite 17 that will form vertebral cartilages and connective tissues. The sclerotome lies ventral to the myotome. Cells of the sclerotome will migrate dorsally to surround the notochord and neural tube. Kimmel et al, 1995.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000831") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000831") AnnotationAssertion(rdfs:label "sclerotome somite 17") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (sclerotome somite 2) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Ventromedial region of somite 2 that will form vertebral cartilages and connective tissues. The sclerotome lies ventral to the myotome. Cells of the sclerotome will migrate dorsally to surround the notochord and neural tube. Kimmel et al, 1995.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000832") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000832") AnnotationAssertion(rdfs:label "sclerotome somite 2") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (sclerotome somite 22) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Ventromedial region of somite 22 that will form vertebral cartilages and connective tissues. The sclerotome lies ventral to the myotome. Cells of the sclerotome will migrate dorsally to surround the notochord and neural tube. Kimmel et al, 1995.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000833") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000833") AnnotationAssertion(rdfs:label "sclerotome somite 22") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (sclerotome somite 25) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Ventromedial region of somite 25 that will form vertebral cartilages and connective tissues. The sclerotome lies ventral to the myotome. Cells of the sclerotome will migrate dorsally to surround the notochord and neural tube. Kimmel et al, 1995.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000834") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000834") AnnotationAssertion(rdfs:label "sclerotome somite 25") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (sclerotome somite 28) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Ventromedial region of somite 28 that will form vertebral cartilages and connective tissues. The sclerotome lies ventral to the myotome. Cells of the sclerotome will migrate dorsally to surround the notochord and neural tube. Kimmel et al, 1995.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000835") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000835") AnnotationAssertion(rdfs:label "sclerotome somite 28") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (sclerotome somite 30) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Ventromedial region of somite 30 that will form vertebral cartilages and connective tissues. The sclerotome lies ventral to the myotome. Cells of the sclerotome will migrate dorsally to surround the notochord and neural tube. Kimmel et al, 1995.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000836") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000836") AnnotationAssertion(rdfs:label "sclerotome somite 30") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (sclerotome somite 6) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Ventromedial region of somite 6 that will form vertebral cartilages and connective tissues. The sclerotome lies ventral to the myotome. Cells of the sclerotome will migrate dorsally to surround the notochord and neural tube. Kimmel et al, 1995.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000837") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000837") AnnotationAssertion(rdfs:label "sclerotome somite 6") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete fast muscle cell somite 29) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000838") AnnotationAssertion(Annotation( "TAO:0000838") Annotation( ) "fast muscle cells somite 29") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000838") AnnotationAssertion(rdfs:label "obsolete fast muscle cell somite 29") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (sclerotome somite 9) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Ventromedial region of somite 9 that will form vertebral cartilages and connective tissues. The sclerotome lies ventral to the myotome. Cells of the sclerotome will migrate dorsally to surround the notochord and neural tube. Kimmel et al, 1995.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000839") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000839") AnnotationAssertion(rdfs:label "sclerotome somite 9") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete slow muscle cell somite 11) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000840") AnnotationAssertion(Annotation( "TAO:0000840") Annotation( ) "slow muscle cells somite 11") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000840") AnnotationAssertion(rdfs:label "obsolete slow muscle cell somite 11") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete slow muscle cell somite 14) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000841") AnnotationAssertion(Annotation( "TAO:0000841") Annotation( ) "slow muscle cells somite 14") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000841") AnnotationAssertion(rdfs:label "obsolete slow muscle cell somite 14") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete slow muscle cell somite 17) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000842") AnnotationAssertion(Annotation( "TAO:0000842") Annotation( ) "slow muscle cells somite 17") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000842") AnnotationAssertion(rdfs:label "obsolete slow muscle cell somite 17") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete slow muscle cell somite 2) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000843") AnnotationAssertion(Annotation( "TAO:0000843") Annotation( ) "slow muscle cells somite 2") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000843") AnnotationAssertion(rdfs:label "obsolete slow muscle cell somite 2") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete slow muscle cell somite 22) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000844") AnnotationAssertion(Annotation( "TAO:0000844") Annotation( ) "slow muscle cells somite 22") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000844") AnnotationAssertion(rdfs:label "obsolete slow muscle cell somite 22") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete slow muscle cell somite 25) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000845") AnnotationAssertion(Annotation( "TAO:0000845") Annotation( ) "slow muscle cells somite 25") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000845") AnnotationAssertion(rdfs:label "obsolete slow muscle cell somite 25") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete slow muscle cell somite 28) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000846") AnnotationAssertion(Annotation( "TAO:0000846") Annotation( ) "slow muscle cells somite 28") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000846") AnnotationAssertion(rdfs:label "obsolete slow muscle cell somite 28") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete slow muscle cell somite 30) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000847") AnnotationAssertion(Annotation( "TAO:0000847") Annotation( ) "slow muscle cells somite 30") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000847") AnnotationAssertion(rdfs:label "obsolete slow muscle cell somite 30") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete slow muscle cell somite 6) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000848") AnnotationAssertion(Annotation( "TAO:0000848") Annotation( ) "slow muscle cells somite 6") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000848") AnnotationAssertion(rdfs:label "obsolete slow muscle cell somite 6") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete fast muscle cell somite 4) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000849") AnnotationAssertion(Annotation( "TAO:0000849") Annotation( ) "fast muscle cells somite 4") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000849") AnnotationAssertion(rdfs:label "obsolete fast muscle cell somite 4") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete slow muscle cell somite 9) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000850") AnnotationAssertion(Annotation( "TAO:0000850") Annotation( ) "slow muscle cells somite 9") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000850") AnnotationAssertion(rdfs:label "obsolete slow muscle cell somite 9") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (somite 12) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Undifferentiated mesodermal component of early trunk segment 12 or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome. Kimmel et al, 1995.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "12"^^xsd:nonNegativeInteger) AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000851") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000851") AnnotationAssertion(rdfs:label "somite 12") SubClassOf( ) # Class: (somite 15) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Undifferentiated mesodermal component of early trunk segment 15 or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome. Kimmel et al, 1995.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "15"^^xsd:nonNegativeInteger) AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000852") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000852") AnnotationAssertion(rdfs:label "somite 15") SubClassOf( ) # Class: (somite 18) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Undifferentiated mesodermal component of early trunk or tail segment 18 or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome. Kimmel et al, 1995.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "18"^^xsd:nonNegativeInteger) AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000853") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000853") AnnotationAssertion(rdfs:label "somite 18") SubClassOf( ) # Class: (somite 21) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Undifferentiated mesodermal component of early tail 21 segment or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome. Kimmel et al, 1995.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "21"^^xsd:nonNegativeInteger) AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000854") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000854") AnnotationAssertion(rdfs:label "somite 21") SubClassOf( ) # Class: (somite 24) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Undifferentiated mesodermal component of early tail segment 24 or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome. Kimmel et al, 1995.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "24"^^xsd:nonNegativeInteger) AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000855") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000855") AnnotationAssertion(rdfs:label "somite 24") SubClassOf( ) # Class: (somite 28) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Undifferentiated mesodermal component of early tail segment 28 or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome. Kimmel et al, 1995.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "28"^^xsd:nonNegativeInteger) AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000856") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000856") AnnotationAssertion(rdfs:label "somite 28") SubClassOf( ) # Class: (somite 4) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Undifferentiated mesodermal component of early trunk segment 4 or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome. Kimmel et al, 1995.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "4"^^xsd:nonNegativeInteger) AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000857") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000857") AnnotationAssertion(rdfs:label "somite 4") SubClassOf( ) # Class: (somite 8) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Undifferentiated mesodermal component of early trunk segment 8 or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome. Kimmel et al, 1995.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "8"^^xsd:nonNegativeInteger) AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000858") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000858") AnnotationAssertion(rdfs:label "somite 8") SubClassOf( ) # Class: (obsolete fast muscle cell somite 7) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000860") AnnotationAssertion(Annotation( "TAO:0000860") Annotation( ) "fast muscle cells somite 7") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000860") AnnotationAssertion(rdfs:label "obsolete fast muscle cell somite 7") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete caudal fin skeleton) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Median fin skeleton supporting the caudal fin.") AnnotationAssertion( "UBERON:4000167") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000862") AnnotationAssertion(rdfs:label "obsolete caudal fin skeleton") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (epaxial region somite 1) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "The epaxial region of somite 1 derived body wall muscle. The epaxial region is dorsal to the horizontal myoseptum. Kimmel et al, 1995.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000864") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000864") AnnotationAssertion(rdfs:label "epaxial region somite 1") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (epaxial region somite 12) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "The epaxial region of somite 12 derived body wall muscle. The epaxial region is dorsal to the horizontal myoseptum. Kimmel et al, 1995.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000865") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000865") AnnotationAssertion(rdfs:label "epaxial region somite 12") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (epaxial region somite 15) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "The epaxial region of somite 15 derived body wall muscle. The epaxial region is dorsal to the horizontal myoseptum. Kimmel et al, 1995.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000866") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000866") AnnotationAssertion(rdfs:label "epaxial region somite 15") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (epaxial region somite 18) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "The epaxial region of somite 18 derived body wall muscle. The epaxial region is dorsal to the horizontal myoseptum. Kimmel et al, 1995.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000867") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000867") AnnotationAssertion(rdfs:label "epaxial region somite 18") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (epaxial region somite 20) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "The epaxial region of somite 20 derived body wall muscle. The epaxial region is dorsal to the horizontal myoseptum. Kimmel et al, 1995.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000868") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000868") AnnotationAssertion(rdfs:label "epaxial region somite 20") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (epaxial region somite 23) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "The epaxial region of somite 23 derived body wall muscle. The epaxial region is dorsal to the horizontal myoseptum. Kimmel et al, 1995.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000869") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000869") AnnotationAssertion(rdfs:label "epaxial region somite 23") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (epaxial region somite 26) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "The epaxial region of somite 26 derived body wall muscle. The epaxial region is dorsal to the horizontal myoseptum. Kimmel et al, 1995.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000870") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000870") AnnotationAssertion(rdfs:label "epaxial region somite 26") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (epaxial region somite 29) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "The epaxial region of somite 29 derived body wall muscle. The epaxial region is dorsal to the horizontal myoseptum. Kimmel et al, 1995.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000872") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000872") AnnotationAssertion(rdfs:label "epaxial region somite 29") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (epaxial region somite 4) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "The epaxial region of somite 4 derived body wall muscle. The epaxial region is dorsal to the horizontal myoseptum. Kimmel et al, 1995.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000873") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000873") AnnotationAssertion(rdfs:label "epaxial region somite 4") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (epaxial region somite 7) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "The epaxial region of somite 7 derived body wall muscle. The epaxial region is dorsal to the horizontal myoseptum. Kimmel et al, 1995.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000874") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000874") AnnotationAssertion(rdfs:label "epaxial region somite 7") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete fast muscle cell somite 11) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000876") AnnotationAssertion(Annotation( "TAO:0000876") Annotation( ) "fast muscle cells somite 11") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000876") AnnotationAssertion(rdfs:label "obsolete fast muscle cell somite 11") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete fast muscle cell somite 14) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000877") AnnotationAssertion(Annotation( "TAO:0000877") Annotation( ) "fast muscle cells somite 14") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000877") AnnotationAssertion(rdfs:label "obsolete fast muscle cell somite 14") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete fast muscle cell somite 17) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000878") AnnotationAssertion(Annotation( "TAO:0000878") Annotation( ) "fast muscle cells somite 17") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000878") AnnotationAssertion(rdfs:label "obsolete fast muscle cell somite 17") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete fast muscle cell somite 2) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000879") AnnotationAssertion(Annotation( "TAO:0000879") Annotation( ) "fast muscle cells somite 2") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000879") AnnotationAssertion(rdfs:label "obsolete fast muscle cell somite 2") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete fast muscle cell somite 22) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000880") AnnotationAssertion(Annotation( "TAO:0000880") Annotation( ) "fast muscle cells somite 22") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000880") AnnotationAssertion(rdfs:label "obsolete fast muscle cell somite 22") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete fast muscle cell somite 25) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000881") AnnotationAssertion(Annotation( "TAO:0000881") Annotation( ) "fast muscle cells somite 25") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000881") AnnotationAssertion(rdfs:label "obsolete fast muscle cell somite 25") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete fast muscle cell somite 28) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000883") AnnotationAssertion(Annotation( "TAO:0000883") Annotation( ) "fast muscle cells somite 28") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000883") AnnotationAssertion(rdfs:label "obsolete fast muscle cell somite 28") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete fast muscle cell somite 30) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000884") AnnotationAssertion(Annotation( "TAO:0000884") Annotation( ) "fast muscle cells somite 30") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000884") AnnotationAssertion(rdfs:label "obsolete fast muscle cell somite 30") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete fast muscle cell somite 6) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000885") AnnotationAssertion(Annotation( "TAO:0000885") Annotation( ) "fast muscle cells somite 6") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000885") AnnotationAssertion(rdfs:label "obsolete fast muscle cell somite 6") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete fast muscle cell somite 9) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000886") AnnotationAssertion(Annotation( "TAO:0000886") Annotation( ) "fast muscle cells somite 9") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000886") AnnotationAssertion(rdfs:label "obsolete fast muscle cell somite 9") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (floor plate neural rod) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000887") AnnotationAssertion(Annotation( "TAO:0000887") "floorplate neural rod") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000887") AnnotationAssertion(rdfs:label "floor plate neural rod") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (hypaxial region somite 1) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "The hypaxial region of somite 1 derived body wall muscle. The hypaxial region is ventral to the horizontal myoseptum. Kimmel et al, 1995.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000891") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000891") AnnotationAssertion(rdfs:label "hypaxial region somite 1") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (hypaxial region somite 12) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "The hypaxial region of somite 12 derived body wall muscle. The hypaxial region is ventral to the horizontal myoseptum. Kimmel et al, 1995.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000892") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000892") AnnotationAssertion(rdfs:label "hypaxial region somite 12") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (hypaxial region somite 15) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "The hypaxial region of somite 15 derived body wall muscle. The hypaxial region is ventral to the horizontal myoseptum. Kimmel et al, 1995.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000894") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000894") AnnotationAssertion(rdfs:label "hypaxial region somite 15") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (hypaxial region somite 18) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "The hypaxial region of somite 18 derived body wall muscle. The hypaxial region is ventral to the horizontal myoseptum. Kimmel et al, 1995.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000895") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000895") AnnotationAssertion(rdfs:label "hypaxial region somite 18") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (hypaxial region somite 20) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "The hypaxial region of somite 20 derived body wall muscle. The hypaxial region is ventral to the horizontal myoseptum. Kimmel et al, 1995.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000896") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000896") AnnotationAssertion(rdfs:label "hypaxial region somite 20") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (hypaxial region somite 23) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "The hypaxial region of somite 23 derived body wall muscle. The hypaxial region is ventral to the horizontal myoseptum. Kimmel et al, 1995.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000897") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000897") AnnotationAssertion(rdfs:label "hypaxial region somite 23") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (hypaxial region somite 26) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "The hypaxial region of somite 26 derived body wall muscle. The hypaxial region is ventral to the horizontal myoseptum. Kimmel et al, 1995.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000898") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000898") AnnotationAssertion(rdfs:label "hypaxial region somite 26") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (hypaxial region somite 29) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "The hypaxial region of somite 29 derived body wall muscle. The hypaxial region is ventral to the horizontal myoseptum. Kimmel et al, 1995.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000899") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000899") AnnotationAssertion(rdfs:label "hypaxial region somite 29") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (hypaxial region somite 4) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "The hypaxial region of somite 4 derived body wall muscle. The hypaxial region is ventral to the horizontal myoseptum. Kimmel et al, 1995.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000900") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000900") AnnotationAssertion(rdfs:label "hypaxial region somite 4") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (hypaxial region somite 7) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "The hypaxial region of somite 7 derived body wall muscle. The hypaxial region is ventral to the horizontal myoseptum. Kimmel et al, 1995.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000901") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000901") AnnotationAssertion(rdfs:label "hypaxial region somite 7") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (medial forebrain bundle telencephalon) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000910") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000910") AnnotationAssertion(rdfs:label "medial forebrain bundle telencephalon") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (transverse process of neural arch 3) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Endochondral bone that is the anterodorsally oriented process of the third neural arch.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion(Annotation( "TAO:0000911") "anterodorsal process of neural arch 3") AnnotationAssertion(Annotation( "TAO:0000911") "transverse process of the third vertebra") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000911") AnnotationAssertion(rdfs:label "transverse process of neural arch 3") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete muscle pioneer somite 11) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000915") AnnotationAssertion(Annotation( "TAO:0000915") Annotation( ) "muscle pioneers somite 11") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000915") AnnotationAssertion(rdfs:label "obsolete muscle pioneer somite 11") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete muscle pioneer somite 14) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000916") AnnotationAssertion(Annotation( "TAO:0000916") Annotation( ) "muscle pioneers somite 14") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000916") AnnotationAssertion(rdfs:label "obsolete muscle pioneer somite 14") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete muscle pioneer somite 17) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000917") AnnotationAssertion(Annotation( "TAO:0000917") Annotation( ) "muscle pioneers somite 17") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000917") AnnotationAssertion(rdfs:label "obsolete muscle pioneer somite 17") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete muscle pioneer somite 20) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000918") AnnotationAssertion(Annotation( "TAO:0000918") Annotation( ) "muscle pioneers somite 20") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000918") AnnotationAssertion(rdfs:label "obsolete muscle pioneer somite 20") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete muscle pioneer somite 23) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000919") AnnotationAssertion(Annotation( "TAO:0000919") Annotation( ) "muscle pioneers somite 23") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000919") AnnotationAssertion(rdfs:label "obsolete muscle pioneer somite 23") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete muscle pioneer somite 26) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000920") AnnotationAssertion(Annotation( "TAO:0000920") Annotation( ) "muscle pioneers somite 26") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000920") AnnotationAssertion(rdfs:label "obsolete muscle pioneer somite 26") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete muscle pioneer somite 29) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000921") AnnotationAssertion(Annotation( "TAO:0000921") Annotation( ) "muscle pioneers somite 29") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000921") AnnotationAssertion(rdfs:label "obsolete muscle pioneer somite 29") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete muscle pioneer somite 4) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000922") AnnotationAssertion(Annotation( "TAO:0000922") Annotation( ) "muscle pioneers somite 4") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000922") AnnotationAssertion(rdfs:label "obsolete muscle pioneer somite 4") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete muscle pioneer somite 7) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000923") AnnotationAssertion(Annotation( "TAO:0000923") Annotation( ) "muscle pioneers somite 7") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000923") AnnotationAssertion(rdfs:label "obsolete muscle pioneer somite 7") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (myotome somite 1) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Portion of somite 1 that gives rise to body wall muscle masses. Kimmel et al, 1995.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000924") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000924") AnnotationAssertion(rdfs:label "myotome somite 1") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (hypaxial region somite 10) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "The hypaxial region of somite 10 derived body wall muscle. The hypaxial region is ventral to the horizontal myoseptum. Kimmel et al, 1995.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000925") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000925") AnnotationAssertion(rdfs:label "hypaxial region somite 10") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (myotome somite 12) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Portion of somite 12 that gives rise to body wall muscle masses. Kimmel et al, 1995.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000926") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000926") AnnotationAssertion(rdfs:label "myotome somite 12") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (myotome somite 16) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Portion of somite 16 that gives rise to body wall muscle masses. Kimmel et al, 1995.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000927") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000927") AnnotationAssertion(rdfs:label "myotome somite 16") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (myotome somite 19) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Portion of somite 19 that gives rise to body wall muscle masses. Kimmel et al, 1995.>.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000928") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000928") AnnotationAssertion(rdfs:label "myotome somite 19") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (myotome somite 21) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Portion of somite 21 that gives rise to body wall muscle masses. Kimmel et al, 1995.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000929") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000929") AnnotationAssertion(rdfs:label "myotome somite 21") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (myotome somite 24) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Portion of somite 24 that gives rise to body wall muscle masses. Kimmel et al, 1995.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000930") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000930") AnnotationAssertion(rdfs:label "myotome somite 24") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (myotome somite 27) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Portion of somite 27 that gives rise to body wall muscle masses. Kimmel et al, 1995.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000931") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000931") AnnotationAssertion(rdfs:label "myotome somite 27") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (myotome somite 3) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Portion of somite 3 that gives rise to body wall muscle masses. Kimmel et al, 1995.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000932") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000932") AnnotationAssertion(rdfs:label "myotome somite 3") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (myotome somite 5) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Portion of somite 5 that gives rise to body wall muscle masses. Kimmel et al, 1995.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000933") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000933") AnnotationAssertion(rdfs:label "myotome somite 5") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (myotome somite 8) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Portion of somite 8 that gives rise to body wall muscle masses. Kimmel et al, 1995.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000934") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000934") AnnotationAssertion(rdfs:label "myotome somite 8") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (hypaxial region somite 13) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "The hypaxial region of somite 13 derived body wall muscle. The hypaxial region is ventral to the horizontal myoseptum. Kimmel et al, 1995.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000937") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000937") AnnotationAssertion(rdfs:label "hypaxial region somite 13") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (nucleus of the medial longitudinal fasciculus synencephalon) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000941") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000941") AnnotationAssertion(rdfs:label "nucleus of the medial longitudinal fasciculus synencephalon") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete paraxial mesenchyme) AnnotationAssertion( "UBERON:0003077") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000942") AnnotationAssertion(rdfs:label "obsolete paraxial mesenchyme") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (hypaxial region somite 16) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "The hypaxial region of somite 16 derived body wall muscle. The hypaxial region is ventral to the horizontal myoseptum. Kimmel et al, 1995.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000946") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000946") AnnotationAssertion(rdfs:label "hypaxial region somite 16") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (sclerotome somite 1) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Ventromedial region of somite 1 that will form vertebral cartilages and connective tissues. The sclerotome lies ventral to the myotome. Cells of the sclerotome will migrate dorsally to surround the notochord and neural tube. Kimmel et al, 1995.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000952") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000952") AnnotationAssertion(rdfs:label "sclerotome somite 1") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (sclerotome somite 12) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Ventromedial region of somite 12 that will form vertebral cartilages and connective tissues. The sclerotome lies ventral to the myotome. Cells of the sclerotome will migrate dorsally to surround the notochord and neural tube. Kimmel et al, 1995.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000953") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000953") AnnotationAssertion(rdfs:label "sclerotome somite 12") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (sclerotome somite 15) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Ventromedial region of somite 15 that will form vertebral cartilages and connective tissues. The sclerotome lies ventral to the myotome. Cells of the sclerotome will migrate dorsally to surround the notochord and neural tube. Kimmel et al, 1995.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000954") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000954") AnnotationAssertion(rdfs:label "sclerotome somite 15") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (sclerotome somite 18) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Ventromedial region of somite 18 that will form vertebral cartilages and connective tissues. The sclerotome lies ventral to the myotome. Cells of the sclerotome will migrate dorsally to surround the notochord and neural tube. Kimmel et al, 1995.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000955") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000955") AnnotationAssertion(rdfs:label "sclerotome somite 18") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (sclerotome somite 20) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Ventromedial region of somite 20 that will form vertebral cartilages and connective tissues. The sclerotome lies ventral to the myotome. Cells of the sclerotome will migrate dorsally to surround the notochord and neural tube. Kimmel et al, 1995.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000956") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000956") AnnotationAssertion(rdfs:label "sclerotome somite 20") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (hypaxial region somite 19) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "The hypaxial region of somite 19 derived body wall muscle. The hypaxial region is ventral to the horizontal myoseptum. Kimmel et al, 1995.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000957") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000957") AnnotationAssertion(rdfs:label "hypaxial region somite 19") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (sclerotome somite 23) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Ventromedial region of somite 23 that will form vertebral cartilages and connective tissues. The sclerotome lies ventral to the myotome. Cells of the sclerotome will migrate dorsally to surround the notochord and neural tube. Kimmel et al, 1995.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000958") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000958") AnnotationAssertion(rdfs:label "sclerotome somite 23") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (sclerotome somite 26) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Ventromedial region of somite 26 that will form vertebral cartilages and connective tissues. The sclerotome lies ventral to the myotome. Cells of the sclerotome will migrate dorsally to surround the notochord and neural tube. Kimmel et al, 1995.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000959") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000959") AnnotationAssertion(rdfs:label "sclerotome somite 26") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (sclerotome somite 29) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Ventromedial region of somite 29 that will form vertebral cartilages and connective tissues. The sclerotome lies ventral to the myotome. Cells of the sclerotome will migrate dorsally to surround the notochord and neural tube. Kimmel et al, 1995.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000960") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000960") AnnotationAssertion(rdfs:label "sclerotome somite 29") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (sclerotome somite 4) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Ventromedial region of somite 4 that will form vertebral cartilages and connective tissues. The sclerotome lies ventral to the myotome. Cells of the sclerotome will migrate dorsally to surround the notochord and neural tube. Kimmel et al, 1995.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000961") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000961") AnnotationAssertion(rdfs:label "sclerotome somite 4") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (sclerotome somite 7) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Ventromedial region of somite 7 that will form vertebral cartilages and connective tissues. The sclerotome lies ventral to the myotome. Cells of the sclerotome will migrate dorsally to surround the notochord and neural tube. Kimmel et al, 1995.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000962") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000962") AnnotationAssertion(rdfs:label "sclerotome somite 7") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete slow muscle cell somite 1) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000963") AnnotationAssertion(Annotation( "TAO:0000963") Annotation( ) "slow muscle cells somite 1") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000963") AnnotationAssertion(rdfs:label "obsolete slow muscle cell somite 1") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete slow muscle cell somite 12) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000964") AnnotationAssertion(Annotation( "TAO:0000964") Annotation( ) "slow muscle cells somite 12") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000964") AnnotationAssertion(rdfs:label "obsolete slow muscle cell somite 12") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete slow muscle cell somite 15) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000965") AnnotationAssertion(Annotation( "TAO:0000965") Annotation( ) "slow muscle cells somite 15") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000965") AnnotationAssertion(rdfs:label "obsolete slow muscle cell somite 15") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete slow muscle cell somite 18) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000966") AnnotationAssertion(Annotation( "TAO:0000966") Annotation( ) "slow muscle cells somite 18") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000966") AnnotationAssertion(rdfs:label "obsolete slow muscle cell somite 18") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete slow muscle cell somite 20) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000967") AnnotationAssertion(Annotation( "TAO:0000967") Annotation( ) "slow muscle cells somite 20") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000967") AnnotationAssertion(rdfs:label "obsolete slow muscle cell somite 20") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (hypaxial region somite 21) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "The hypaxial region of somite 21 derived body wall muscle. The hypaxial region is ventral to the horizontal myoseptum. Kimmel et al, 1995.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000968") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000968") AnnotationAssertion(rdfs:label "hypaxial region somite 21") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete slow muscle cell somite 23) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000969") AnnotationAssertion(Annotation( "TAO:0000969") Annotation( ) "slow muscle cells somite 23") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000969") AnnotationAssertion(rdfs:label "obsolete slow muscle cell somite 23") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete slow muscle cell somite 26) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000970") AnnotationAssertion(Annotation( "TAO:0000970") Annotation( ) "slow muscle cells somite 26") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000970") AnnotationAssertion(rdfs:label "obsolete slow muscle cell somite 26") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete slow muscle cell somite 29) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000971") AnnotationAssertion(Annotation( "TAO:0000971") Annotation( ) "slow muscle cells somite 29") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000971") AnnotationAssertion(rdfs:label "obsolete slow muscle cell somite 29") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete slow muscle cell somite 4) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000972") AnnotationAssertion(Annotation( "TAO:0000972") Annotation( ) "slow muscle cells somite 4") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000972") AnnotationAssertion(rdfs:label "obsolete slow muscle cell somite 4") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete slow muscle cell somite 7) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000973") AnnotationAssertion(Annotation( "TAO:0000973") Annotation( ) "slow muscle cells somite 7") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000973") AnnotationAssertion(rdfs:label "obsolete slow muscle cell somite 7") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (somite 10) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Undifferentiated mesodermal component of early trunk segment 10 or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome. Kimmel et al, 1995.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "10"^^xsd:nonNegativeInteger) AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000974") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000974") AnnotationAssertion(rdfs:label "somite 10") SubClassOf( ) # Class: (somite 13) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Undifferentiated mesodermal component of early trunk segment 13 or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome. Kimmel et al, 1995.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "13"^^xsd:nonNegativeInteger) AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000975") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000975") AnnotationAssertion(rdfs:label "somite 13") SubClassOf( ) # Class: (somite 16) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Undifferentiated mesodermal component of early trunk segment 16 or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome. Kimmel et al, 1995.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "16"^^xsd:nonNegativeInteger) AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000976") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000976") AnnotationAssertion(rdfs:label "somite 16") SubClassOf( ) # Class: (somite 19) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Undifferentiated mesodermal component of early trunk or tail segment 19 or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome. Kimmel et al, 1995.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "19"^^xsd:nonNegativeInteger) AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000977") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000977") AnnotationAssertion(rdfs:label "somite 19") SubClassOf( ) # Class: (somite 22) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Undifferentiated mesodermal component of early tail segment 22 or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome. Kimmel et al, 1995.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "22"^^xsd:nonNegativeInteger) AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000978") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000978") AnnotationAssertion(rdfs:label "somite 22") SubClassOf( ) # Class: (hypaxial region somite 24) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "The hypaxial region of somite 24 derived body wall muscle. The hypaxial region is ventral to the horizontal myoseptum. Kimmel et al, 1995.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000979") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000979") AnnotationAssertion(rdfs:label "hypaxial region somite 24") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (somite 25) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Undifferentiated mesodermal component of early tail segment 25 or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome. Kimmel et al, 1995.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "25"^^xsd:nonNegativeInteger) AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000980") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000980") AnnotationAssertion(rdfs:label "somite 25") SubClassOf( ) # Class: (somite 29) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Undifferentiated mesodermal component of early tail segment 29 or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome. Kimmel et al, 1995.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "29"^^xsd:nonNegativeInteger) AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000981") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000981") AnnotationAssertion(rdfs:label "somite 29") SubClassOf( ) # Class: (somite 6) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Undifferentiated mesodermal component of early trunk segment 6 or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome. Kimmel et al, 1995.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "6"^^xsd:nonNegativeInteger) AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000982") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000982") AnnotationAssertion(rdfs:label "somite 6") SubClassOf( ) # Class: (somite 9) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Undifferentiated mesodermal component of early trunk segment 9 or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome. Kimmel et al, 1995.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "9"^^xsd:nonNegativeInteger) AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000983") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000983") AnnotationAssertion(rdfs:label "somite 9") SubClassOf( ) # Class: (superior reticular formation tegmentum) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000984") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000984") AnnotationAssertion(rdfs:label "superior reticular formation tegmentum") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (ventral rhombencephalic commissure medulla oblongata) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000985") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000985") AnnotationAssertion(rdfs:label "ventral rhombencephalic commissure medulla oblongata") SubClassOf( ) # Class: (hypaxial region somite 27) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "The hypaxial region of somite 27 derived body wall muscle. The hypaxial region is ventral to the horizontal myoseptum. Kimmel et al, 1995.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000986") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000986") AnnotationAssertion(rdfs:label "hypaxial region somite 27") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (hypaxial region somite 3) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "The hypaxial region of somite 3 derived body wall muscle. The hypaxial region is ventral to the horizontal myoseptum. Kimmel et al, 1995.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000987") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000987") AnnotationAssertion(rdfs:label "hypaxial region somite 3") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (hypaxial region somite 5) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "The hypaxial region of somite 5 derived body wall muscle. The hypaxial region is ventral to the horizontal myoseptum. Kimmel et al, 1995.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000988") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000988") AnnotationAssertion(rdfs:label "hypaxial region somite 5") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (hypaxial region somite 8) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "The hypaxial region of somite 8 derived body wall muscle. The hypaxial region is ventral to the horizontal myoseptum. Kimmel et al, 1995.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000989") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000989") AnnotationAssertion(rdfs:label "hypaxial region somite 8") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (epaxial region somite 10) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "The epaxial region of somite 10 derived body wall muscle. The epaxial region is dorsal to the horizontal myoseptum. Kimmel et al, 1995.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000991") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000991") AnnotationAssertion(rdfs:label "epaxial region somite 10") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lateral wall neural rod) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000993") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000993") AnnotationAssertion(rdfs:label "lateral wall neural rod") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (medial funicular nucleus trigeminal nuclei) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000997") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2000997") AnnotationAssertion(rdfs:label "medial funicular nucleus trigeminal nuclei") SubClassOf( ) # Class: (epaxial region somite 13) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "The epaxial region of somite 13 derived body wall muscle. The epaxial region is dorsal to the horizontal myoseptum. Kimmel et al, 1995.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001001") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001001") AnnotationAssertion(rdfs:label "epaxial region somite 13") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete motor axons peripheral) AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001002") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001002") AnnotationAssertion(rdfs:comment "removed axiom: part_of some 'central nervous system' Seems out of scope for uberon and/or not very useful as a class.") AnnotationAssertion(rdfs:label "obsolete motor axons peripheral") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete muscle pioneer somite 12) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001003") AnnotationAssertion(Annotation( "TAO:0001003") Annotation( ) "muscle pioneers somite 12") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001003") AnnotationAssertion(rdfs:label "obsolete muscle pioneer somite 12") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete muscle pioneer somite 15) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001004") AnnotationAssertion(Annotation( "TAO:0001004") Annotation( ) "muscle pioneers somite 15") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001004") AnnotationAssertion(rdfs:label "obsolete muscle pioneer somite 15") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete muscle pioneer somite 18) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001005") AnnotationAssertion(Annotation( "TAO:0001005") Annotation( ) "muscle pioneers somite 18") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001005") AnnotationAssertion(rdfs:label "obsolete muscle pioneer somite 18") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete muscle pioneer somite 21) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001006") AnnotationAssertion(Annotation( "TAO:0001006") Annotation( ) "muscle pioneers somite 21") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001006") AnnotationAssertion(rdfs:label "obsolete muscle pioneer somite 21") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete muscle pioneer somite 24) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001007") AnnotationAssertion(Annotation( "TAO:0001007") Annotation( ) "muscle pioneers somite 24") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001007") AnnotationAssertion(rdfs:label "obsolete muscle pioneer somite 24") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete muscle pioneer somite 27) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001008") AnnotationAssertion(Annotation( "TAO:0001008") Annotation( ) "muscle pioneers somite 27") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001008") AnnotationAssertion(rdfs:label "obsolete muscle pioneer somite 27") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete muscle pioneer somite 3) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001009") AnnotationAssertion(Annotation( "TAO:0001009") Annotation( ) "muscle pioneers somite 3") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001009") AnnotationAssertion(rdfs:label "obsolete muscle pioneer somite 3") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete muscle pioneer somite 5) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001010") AnnotationAssertion(Annotation( "TAO:0001010") Annotation( ) "muscle pioneers somite 5") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001010") AnnotationAssertion(rdfs:label "obsolete muscle pioneer somite 5") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete muscle pioneer somite 8) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001011") AnnotationAssertion(Annotation( "TAO:0001011") Annotation( ) "muscle pioneers somite 8") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001011") AnnotationAssertion(rdfs:label "obsolete muscle pioneer somite 8") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (epaxial region somite 16) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "The epaxial region of somite 16 derived body wall muscle. The epaxial region is dorsal to the horizontal myoseptum. Kimmel et al, 1995.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001012") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001012") AnnotationAssertion(rdfs:label "epaxial region somite 16") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (myotome somite 10) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Portion of somite 10 that gives rise to body wall muscle masses. Kimmel et al, 1995.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001013") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001013") AnnotationAssertion(rdfs:label "myotome somite 10") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (myotome somite 13) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Portion of somite 13 that gives rise to body wall muscle masses. Kimmel et al, 1995.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001014") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001014") AnnotationAssertion(rdfs:label "myotome somite 13") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (myotome somite 17) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Portion of somite 17 that gives rise to body wall muscle masses. Kimmel et al, 1995.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001015") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001015") AnnotationAssertion(rdfs:label "myotome somite 17") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (myotome somite 2) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Portion of somite 2 that gives rise to body wall muscle masses. Kimmel et al, 1995.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001016") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001016") AnnotationAssertion(rdfs:label "myotome somite 2") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (myotome somite 22) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Portion of somite 22 that gives rise to body wall muscle masses. Kimmel et al, 1995.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001017") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001017") AnnotationAssertion(rdfs:label "myotome somite 22") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (myotome somite 25) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Portion of somite 25 that gives rise to body wall muscle masses. Kimmel et al, 1995.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001018") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001018") AnnotationAssertion(rdfs:label "myotome somite 25") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (myotome somite 28) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Portion of somite 28 that gives rise to body wall muscle masses. Kimmel et al, 1995.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001019") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001019") AnnotationAssertion(rdfs:label "myotome somite 28") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (myotome somite 30) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Portion of somite 30 that gives rise to body wall muscle masses. Kimmel et al, 1995.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001020") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001020") AnnotationAssertion(rdfs:label "myotome somite 30") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (myotome somite 6) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Portion of somite 6 that gives rise to body wall muscle masses. Kimmel et al, 1995.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001021") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001021") AnnotationAssertion(rdfs:label "myotome somite 6") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (myotome somite 9) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Portion of somite 9 that gives rise to body wall muscle masses. Kimmel et al, 1995.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001022") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001022") AnnotationAssertion(rdfs:label "myotome somite 9") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (epaxial region somite 19) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "The epaxial region of somite 19 derived body wall muscle. The epaxial region is dorsal to the horizontal myoseptum. Kimmel et al, 1995.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001023") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001023") AnnotationAssertion(rdfs:label "epaxial region somite 19") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (epaxial region somite 21) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "The epaxial region of somite 21 derived body wall muscle. The epaxial region is dorsal to the horizontal myoseptum. Kimmel et al, 1995.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001030") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001030") AnnotationAssertion(rdfs:label "epaxial region somite 21") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (sclerotome somite 10) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Ventromedial region of somite 10 that will form vertebral cartilages and connective tissues. The sclerotome lies ventral to the myotome. Cells of the sclerotome will migrate dorsally to surround the notochord and neural tube. Kimmel et al, 1995.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001036") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001036") AnnotationAssertion(rdfs:label "sclerotome somite 10") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (sclerotome somite 13) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Ventromedial region of somite 13 that will form vertebral cartilages and connective tissues. The sclerotome lies ventral to the myotome. Cells of the sclerotome will migrate dorsally to surround the notochord and neural tube. Kimmel et al, 1995.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001037") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001037") AnnotationAssertion(rdfs:label "sclerotome somite 13") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (sclerotome somite 16) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Ventromedial region of somite 16 that will form vertebral cartilages and connective tissues. The sclerotome lies ventral to the myotome. Cells of the sclerotome will migrate dorsally to surround the notochord and neural tube. Kimmel et al, 1995.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001038") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001038") AnnotationAssertion(rdfs:label "sclerotome somite 16") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (sclerotome somite 19) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Ventromedial region of somite 19 that will form vertebral cartilages and connective tissues. The sclerotome lies ventral to the myotome. Cells of the sclerotome will migrate dorsally to surround the notochord and neural tube. Kimmel et al, 1995.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001039") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001039") AnnotationAssertion(rdfs:label "sclerotome somite 19") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (epaxial region somite 24) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "The epaxial region of somite 24 derived body wall muscle. The epaxial region is dorsal to the horizontal myoseptum. Kimmel et al, 1995.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001040") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001040") AnnotationAssertion(rdfs:label "epaxial region somite 24") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (sclerotome somite 21) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Ventromedial region of somite 21 that will form vertebral cartilages and connective tissues. The sclerotome lies ventral to the myotome. Cells of the sclerotome will migrate dorsally to surround the notochord and neural tube. Kimmel et al, 1995.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001041") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001041") AnnotationAssertion(rdfs:label "sclerotome somite 21") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (sclerotome somite 24) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Ventromedial region of somite 24 that will form vertebral cartilages and connective tissues. The sclerotome lies ventral to the myotome. Cells of the sclerotome will migrate dorsally to surround the notochord and neural tube. Kimmel et al, 1995.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001042") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001042") AnnotationAssertion(rdfs:label "sclerotome somite 24") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (sclerotome somite 27) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Ventromedial region of somite 27 that will form vertebral cartilages and connective tissues. The sclerotome lies ventral to the myotome. Cells of the sclerotome will migrate dorsally to surround the notochord and neural tube. Kimmel et al, 1995.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001043") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001043") AnnotationAssertion(rdfs:label "sclerotome somite 27") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (sclerotome somite 3) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Ventromedial region of somite 3 that will form vertebral cartilages and connective tissues. The sclerotome lies ventral to the myotome. Cells of the sclerotome will migrate dorsally to surround the notochord and neural tube. Kimmel et al, 1995.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001044") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001044") AnnotationAssertion(rdfs:label "sclerotome somite 3") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (sclerotome somite 5) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Ventromedial region of somite 5 that will form vertebral cartilages and connective tissues. The sclerotome lies ventral to the myotome. Cells of the sclerotome will migrate dorsally to surround the notochord and neural tube. Kimmel et al, 1995.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001045") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001045") AnnotationAssertion(rdfs:label "sclerotome somite 5") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (sclerotome somite 8) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Ventromedial region of somite 8 that will form vertebral cartilages and connective tissues. The sclerotome lies ventral to the myotome. Cells of the sclerotome will migrate dorsally to surround the notochord and neural tube. Kimmel et al, 1995.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001046") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001046") AnnotationAssertion(rdfs:label "sclerotome somite 8") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete slow muscle cell somite 10) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001047") AnnotationAssertion(Annotation( "TAO:0001047") Annotation( ) "slow muscle cells somite 10") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001047") AnnotationAssertion(rdfs:label "obsolete slow muscle cell somite 10") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete slow muscle cell somite 13) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001048") AnnotationAssertion(Annotation( "TAO:0001048") Annotation( ) "slow muscle cells somite 13") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001048") AnnotationAssertion(rdfs:label "obsolete slow muscle cell somite 13") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete slow muscle cell somite 16) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001049") AnnotationAssertion(Annotation( "TAO:0001049") Annotation( ) "slow muscle cells somite 16") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001049") AnnotationAssertion(rdfs:label "obsolete slow muscle cell somite 16") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete slow muscle cell somite 19) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001050") AnnotationAssertion(Annotation( "TAO:0001050") Annotation( ) "slow muscle cells somite 19") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001050") AnnotationAssertion(rdfs:label "obsolete slow muscle cell somite 19") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (caudal division of the internal carotid artery) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001051") AnnotationAssertion(Annotation( "TAO:0001051") "CaDI") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001051") AnnotationAssertion(rdfs:label "caudal division of the internal carotid artery") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (primordial hindbrain channel) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "The paired vessels that run along the lateral walls of the hindbrain and drain into the anterior cardinal veins. Isogai et al. (2002).") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001052") AnnotationAssertion(Annotation( "TAO:0001052") "PHCB") AnnotationAssertion(Annotation( "TAO:0001052") "medial head vein") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001052") AnnotationAssertion(rdfs:label "primordial hindbrain channel") SubClassOf( ) SubClassOf( ) # Class: (future internal carotid artery) AnnotationAssertion( "EFO:0003612") AnnotationAssertion( "TAO:0001053") AnnotationAssertion( "ZFA:0001053") AnnotationAssertion(Annotation( "TAO:0001053") "PICA") AnnotationAssertion(Annotation( "ZFA:0001053") "primitive internal carotid artery") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001053") AnnotationAssertion(rdfs:label "future internal carotid artery") SubClassOf( ) SubClassOf( ) SubClassOf(Annotation( "EHDAA2"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lateral dorsal aorta) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Connect the outflow of the aortic arches to the dorsal aorta. The place where the lateral dorsal aorta fuse is is called the radiax of the aorta. Isogai et al. 2001.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001054") AnnotationAssertion(Annotation( "TAO:0001054") "LDA") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001054") AnnotationAssertion(rdfs:label "lateral dorsal aorta") SubClassOf( ) # Class: (pronephric duct opening) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001055") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001055") AnnotationAssertion(rdfs:label "pronephric duct opening") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete caudal fin) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "The caudal fin is the most posterior median fin. It is composed of a complex of three modified centra and modified neural and hemal arches and spines. Mabee and Bird, 2001.") AnnotationAssertion( "UBERON:4000164") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion(Annotation( "PSPUB:0000164"^^xsd:string) "nageoire caudale") AnnotationAssertion(Annotation( "TAO:0001058") "tail") AnnotationAssertion(Annotation( "TAO:0001058") "tail fin") AnnotationAssertion(Annotation( "PSPUB:0000135") "uroptère") AnnotationAssertion(Annotation( "PSPUB:0000140") "uroptérygie") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001058") AnnotationAssertion(rdfs:label "obsolete caudal fin") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (cranial division of the internal carotid artery) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001059") AnnotationAssertion(Annotation( "TAO:0001059") "CrDI") AnnotationAssertion(Annotation( "TAO:0001059") "rostral division of the internal carotid artery") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001059") AnnotationAssertion(rdfs:label "cranial division of the internal carotid artery") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (basidorsal) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Basidorsals are bilaterally paired cartilages on the dorsolateral side of the notochord which are replaced by ossified neural arches or dorsal arcocentra. In otophysan fishes, basidorsal 1, bd2, bd3, and bd4 give rise to parts of the Weberian apparatus.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001060") AnnotationAssertion(Annotation( "TAO:0001060") "arcualia") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001060") AnnotationAssertion(rdfs:label "basidorsal") SubClassOf( ) # Class: (presumptive mesencephalic artery) AnnotationAssertion(Annotation( ) "Precursor to mesencephalic artery.") AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Branches dorsally from the cranial division of the internal carotid artery, then curves caudally along the dorsal medial wall of the eye capsule to drain into the PMBC just rostral to the midbrain hindbrain boundar[ZFIN:curator]y") AnnotationAssertion( "EFO:0003615") AnnotationAssertion( "TAO:0001062") AnnotationAssertion( "ZFA:0001062") AnnotationAssertion(Annotation( "TAO:0001062") "PMsA") AnnotationAssertion(Annotation( "ZFA:0001062") "primitive mesencephalic artery") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001062") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "presumptive mesencephalic artery") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete lateral mesoderm) AnnotationAssertion( "UBERON:0003081") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001065") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001065") AnnotationAssertion(rdfs:label "obsolete lateral mesoderm") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (axial vasculature) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001073") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001073") AnnotationAssertion(rdfs:label "axial vasculature") SubClassOf( ) # Class: (intestinal bulb) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "This anteriormost portion of the intestine has the most digestive enzymes and the greatest epithelial surface area. Wallace et al, 2005.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001076") AnnotationAssertion(Annotation( "TAO:0001076") "anterior intestine") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001076") AnnotationAssertion(rdfs:label "intestinal bulb") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete muscle pioneer) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001086") AnnotationAssertion(Annotation( "TAO:0001086") Annotation( ) "muscle pioneers") AnnotationAssertion(Annotation( "TAO:0001086") "non migratory adaxial cells") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001086") AnnotationAssertion(rdfs:comment "this class and all children are being obsoleted from uberon because they were unnecessarily generalized into TAO and because they are cell types.") AnnotationAssertion(rdfs:label "obsolete muscle pioneer") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (myoseptum) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001089") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001089") AnnotationAssertion(rdfs:label "myoseptum") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete unspecified) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Annotation with this anatomy term indicates that a structure was not specified by the author.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001093") AnnotationAssertion(rdfs:label "obsolete unspecified") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (immature macula) AnnotationAssertion(Annotation( "ZFA:0001095") "An otic sensory epithelium that will develop into the mature macula.") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001095") AnnotationAssertion(Annotation( "TAO:0001095") Annotation( ) "immature maculae") AnnotationAssertion(Annotation( "TAO:0001095") "immature sensory patch") AnnotationAssertion(Annotation( "TAO:0001095") "immature sensory patches") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001095") AnnotationAssertion(rdfs:label "immature macula") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (immature anterior macula) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001096") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001096") AnnotationAssertion(rdfs:label "immature anterior macula") SubClassOf( ) # Class: (immature posterior macula) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001097") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001097") AnnotationAssertion(rdfs:label "immature posterior macula") SubClassOf( ) # Class: (obsolete immature hair cell anterior macula) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001098") AnnotationAssertion(Annotation( "TAO:0001098") Annotation( ) "immature sensory hair cells anterior macula") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001098") AnnotationAssertion(rdfs:label "obsolete immature hair cell anterior macula") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete immature hair cell posterior macula) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001099") AnnotationAssertion(Annotation( "TAO:0001099") Annotation( ) "immature sensory hair cells posterior macula") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001099") AnnotationAssertion(rdfs:label "obsolete immature hair cell posterior macula") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (immature anterior otolith) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001102") AnnotationAssertion(rdfs:label "immature anterior otolith") SubClassOf( ) # Class: (immature posterior otolith) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001103") AnnotationAssertion(rdfs:label "immature posterior otolith") SubClassOf( ) # Class: (obsolete oocyte) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "CL:0000023") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001109") AnnotationAssertion(Annotation( "TAO:0001109") "egg") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001109") AnnotationAssertion(rdfs:label "obsolete oocyte") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (urogenital papilla) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "A protuberance in front of the gential pore and behind the vent. Mature females have a well developed urogenital papillae whilst in mature males it is poorly developed. Brion et al, 2004.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001118") AnnotationAssertion(Annotation( "TAO:0001118") "UGP") AnnotationAssertion(Annotation( "TAO:0001118") "anal papilla") AnnotationAssertion(Annotation( "TAO:0001118") "anal papillae") AnnotationAssertion(Annotation( "TAO:0001118") "genital papilla") AnnotationAssertion(Annotation( "TAO:0001118") Annotation( ) "urogenital papillae") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001118") AnnotationAssertion(rdfs:label "urogenital papilla") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete median fin skeleton) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Postcranial axial skeleton that is unpaired and located on the sagittal plane of the organism.") AnnotationAssertion( "UBERON:4000170") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion(Annotation( "TAO:0001123") "axial fin skeleton") AnnotationAssertion(Annotation( "TAO:0001123") "unpaired fin skeleton") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001123") AnnotationAssertion(rdfs:label "obsolete median fin skeleton") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete dorsal fin skeleton) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Median fin skeleton located on the dorsal surface of the organism.") AnnotationAssertion( "UBERON:4000168") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001124") AnnotationAssertion(rdfs:label "obsolete dorsal fin skeleton") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (organizer inducing center) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "The dorsal marginal region of the YSL where maternal dorsal determinants localize. Participates in positioning the shield. Ho et al, 1999.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001125") AnnotationAssertion(Annotation( "TAO:0001125") "Nieuwkoop center") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001125") AnnotationAssertion(rdfs:label "organizer inducing center") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (noninvoluting endocytic marginal cell cluster) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "The NEM cell cluster lies in a superficial position of the dorsal blastoderm margin encompassing EVL cells and one or two layers of underlying deep cells. Unlike other marginal blastomeres, cells in this cluster do not participate in involution. Cooper et al, 1996.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001126") AnnotationAssertion(Annotation( "TAO:0001126") "NEM") AnnotationAssertion(Annotation( "TAO:0001126") Annotation( ) "noninvoluting endocytic marginal cells") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001126") AnnotationAssertion(rdfs:label "noninvoluting endocytic marginal cell cluster") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pharyngeal pouches 2-6) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001129") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001129") AnnotationAssertion(rdfs:label "pharyngeal pouches 2-6") SubClassOf( ) # Class: (obsolete anal fin) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Median fin that is located posterior to the anus.") AnnotationAssertion( "UBERON:4000163") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion(Annotation( "PSPUB:0000164"^^xsd:string) "nageoire anale") AnnotationAssertion(Annotation( "PSPUB:0000136") "proctoptère") AnnotationAssertion(Annotation( "PAPUB:0000142") Annotation( "PSPUB:0000140") "proctoptérygie") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001162") AnnotationAssertion(rdfs:label "obsolete anal fin") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (supraneural 7 bone) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001163") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001163") AnnotationAssertion(rdfs:label "supraneural 7 bone") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (supraneural 6 bone) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001164") AnnotationAssertion(Annotation( "TAO:0001164") "sn6") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001164") AnnotationAssertion(rdfs:label "supraneural 6 bone") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (supraneural 5 bone) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001165") AnnotationAssertion(Annotation( "TAO:0001165") "sn5") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001165") AnnotationAssertion(rdfs:label "supraneural 5 bone") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (supraneural 9 bone) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001166") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001166") AnnotationAssertion(rdfs:label "supraneural 9 bone") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (vertebral element 1) AnnotationAssertion( "1"^^xsd:nonNegativeInteger) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001167") AnnotationAssertion(rdfs:label "vertebral element 1") SubClassOf( ) # Class: (vertebral element 2) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "Vertebra that is posteriorly adjacent to vertebra 1.") AnnotationAssertion( "2"^^xsd:nonNegativeInteger) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001168") AnnotationAssertion(rdfs:label "vertebral element 2") SubClassOf( ) # Class: (vertebral element 3) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Vertebra that is posteriorly adjacent to vertebra 2.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "3"^^xsd:nonNegativeInteger) AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001169") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001169") AnnotationAssertion(rdfs:label "vertebral element 3") SubClassOf( ) # Class: (vertebral element 4) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Vertebra that is anteriorly adjacent to vertebra 5.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "4"^^xsd:nonNegativeInteger) AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001170") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001170") AnnotationAssertion(rdfs:label "vertebral element 4") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) # Class: (roofing cartilage) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Cartilaginous larval structure dorsal to the four anterior-most vertebrae, which forms the connection between neural arches and supraneurals in the Weberian apparatus. Bird and Mabee, 2003.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001172") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001172") AnnotationAssertion(rdfs:label "roofing cartilage") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (epidermal superficial stratum) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001179") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001179") AnnotationAssertion(rdfs:label "epidermal superficial stratum") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (epidermal intermediate stratum) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001181") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001181") AnnotationAssertion(rdfs:label "epidermal intermediate stratum") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (dermal superficial region) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001183") AnnotationAssertion(Annotation( "TAO:0001183") "stratum laxum") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001183") AnnotationAssertion(rdfs:label "dermal superficial region") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (collagenous dermal stroma) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "A layer of collagen fibrils present in the imature integument in an acellular subepidermal space. At first, the fibrils are all oriented in the same direction, later they form the complex plywood-like structure that is characteristic of the dermal deep region. Le Guellec et al, 2004.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001186") AnnotationAssertion(Annotation( "TAO:0001186") "primary dermal stroma") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001186") AnnotationAssertion(rdfs:label "collagenous dermal stroma") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (supraneural 2 bone) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Supraneural bone located dorsal to vertebra 2.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001191") AnnotationAssertion(Annotation( "TAO:doi:10.1046/j.1096-3642.2002.00014.x") "small supraneural") AnnotationAssertion(Annotation( "TAO:0001191") "sn2") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001191") AnnotationAssertion(rdfs:comment "In otophysans, supraneural 2 bone is part of the neural complex.") AnnotationAssertion(rdfs:label "supraneural 2 bone") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (supraneural 3 bone) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Supraneural bone that is located dorsal to vertebrae 3 and 4.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001192") AnnotationAssertion(Annotation( "TAO:doi:10.1046/j.1096-3642.2002.00014.x") "large supraneural") AnnotationAssertion(Annotation( "TAO:0001192") "sn3") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001192") AnnotationAssertion(rdfs:comment "In otophysans, supraneural 3 bone is part of the neural complex and fuses in development with neural arches 3 and 4.") AnnotationAssertion(rdfs:label "supraneural 3 bone") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (supraneural 8 bone) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001193") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001193") AnnotationAssertion(rdfs:label "supraneural 8 bone") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (ventral lateral mesoderm) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001201") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001201") AnnotationAssertion(rdfs:label "ventral lateral mesoderm") SubClassOf( ) # Class: (obsolete ciliary body) AnnotationAssertion( "UBERON:0001775") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001203") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001203") AnnotationAssertion(rdfs:label "obsolete ciliary body") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (basibranchial copula) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Pharyngeal arch cartilage that is ventral, median, and associated with more than one pharyngeal arch in the pharyngeal arch 3-7 skeleton.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001220") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "TAO:0001220") "copula") AnnotationAssertion(Annotation( "TAO:0001220") Annotation( ) "copulae") AnnotationAssertion( "UBERON:2001220") AnnotationAssertion(rdfs:label "basibranchial copula") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (anterior copula) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Copula that is ventral, median, and associated with pharyngeal arches 3-5.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion(Annotation( "TAO:0001221") "copula 1") AnnotationAssertion(Annotation( "TAO:0001221") "copula 2") AnnotationAssertion( "ZFA:0001221") AnnotationAssertion(Annotation( "TAO:0001221") "anterior basibranchial copula") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001221") AnnotationAssertion(rdfs:label "anterior copula") SubClassOf( ) # Class: (posterior copula) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Copula that is ventral, median, and associated with branchial arches 4 and 5 (pharyngeal arches 6-7).") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001222") AnnotationAssertion(Annotation( "TAO:0001222") "copula 2") AnnotationAssertion(Annotation( "TAO:0001222") "posterior basibranchial copula") AnnotationAssertion(Annotation( "TAO:0001222") "posterior copula") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "TAO:0001222") "copula 3") AnnotationAssertion( "UBERON:2001222") AnnotationAssertion(rdfs:label "posterior copula") SubClassOf( ) # Class: (basibranchial 1 bone) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Basibranchial bone that is ventral, median, and associated with branchial arch 1 (pharyngeal arch 3). Typically develops in the anterior copula cartilage.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001223") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001223") AnnotationAssertion(rdfs:label "basibranchial 1 bone") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (basibranchial 2 bone) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Basibranchial bone that is ventral, median, and associated with branchial arch 2 (pharyngeal arch 4). Typically develops in the anterior copula cartilage.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001224") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001224") AnnotationAssertion(rdfs:label "basibranchial 2 bone") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (basibranchial 3 bone) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Basibranchial bone that is ventral, median, and associated with branchial arch 3 (pharyngeal arch 5). Typically develops in the anterior copula cartilage.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001225") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001225") AnnotationAssertion(rdfs:label "basibranchial 3 bone") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (basibranchial 4 bone) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Basibranchial bone that is ventral, median, and associated with branchial arch 4 (pharyngeal arch 6). Develops in posterior copula cartilage or basibranchial 4 cartilage.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001226") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001226") AnnotationAssertion(rdfs:label "basibranchial 4 bone") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pharyngeal arch 3 skeleton) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001228") AnnotationAssertion(Annotation( "TAO:0001228") "branchial arch 1 skeleton") AnnotationAssertion(Annotation( "TAO:0001228") "gill arch 1 skeleton") AnnotationAssertion(Annotation( "TAO:0001228") "visceral arch 3 skeleton") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001228") AnnotationAssertion(rdfs:label "pharyngeal arch 3 skeleton") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pharyngeal arch 7 skeleton) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001229") AnnotationAssertion(Annotation( "TAO:0001229") "branchial arch 5 skeleton") AnnotationAssertion(Annotation( "TAO:0001229") "gill arch 5 skeleton") AnnotationAssertion(Annotation( "TAO:0001229") "visceral arch 7 skeleton") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001229") AnnotationAssertion(rdfs:label "pharyngeal arch 7 skeleton") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pharyngeal arch 6 skeleton) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001230") AnnotationAssertion(Annotation( "TAO:0001230") "branchial arch 4 skeleton") AnnotationAssertion(Annotation( "TAO:0001230") "gill arch 4 skeleton") AnnotationAssertion(Annotation( "TAO:0001230") "visceral arch 6 skeleton") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001230") AnnotationAssertion(rdfs:label "pharyngeal arch 6 skeleton") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pharyngeal arch 4 skeleton) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001231") AnnotationAssertion(Annotation( "TAO:0001231") "branchial arch 2 skeleton") AnnotationAssertion(Annotation( "TAO:0001231") "gill arch 2 skeleton") AnnotationAssertion(Annotation( "TAO:0001231") "visceral arch 4 skeleton") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001231") AnnotationAssertion(rdfs:label "pharyngeal arch 4 skeleton") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pharyngeal arch 5 skeleton) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001232") AnnotationAssertion(Annotation( "TAO:0001232") "branchial arch 3 skeleton") AnnotationAssertion(Annotation( "TAO:0001232") "gill arch 3 skeleton") AnnotationAssertion(Annotation( "TAO:0001232") "visceral arch 5 skeleton") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001232") AnnotationAssertion(rdfs:label "pharyngeal arch 5 skeleton") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (hypobranchial 1 bone) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Hypobranchial bone that is bilaterally paired and articulates with a median skeletal element medially and with a ceratobranchial 1 element laterally. Develops in hypobranchial 1 cartilage.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001233") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001233") AnnotationAssertion(rdfs:label "hypobranchial 1 bone") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (hypobranchial 4 bone) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Hypobranchial bone that is bilaterally paired and articulates with a median skeletal element medially and with a ceratobranchial 4 element laterally. Develops in hypobranchial 4 cartilage.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001234") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001234") AnnotationAssertion(rdfs:label "hypobranchial 4 bone") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (hypobranchial 3 bone) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Hypobranchial bone that is bilaterally paired and articulates with a median skeletal element medially and with a ceratobranchial 3 element laterally. Develops in hypobranchial 3 cartilage.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001235") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001235") AnnotationAssertion(rdfs:label "hypobranchial 3 bone") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) SubClassOf( ObjectSomeValuesFrom( )) # Class: (hypobranchial 2 bone) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Hypobranchial bone that is bilaterally paired and articulates with a median skeletal element medially and with a ceratobranchial 2 element laterally. Develops in hypobranchial 2 cartilage.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001236") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001236") AnnotationAssertion(rdfs:label "hypobranchial 2 bone") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (ceratobranchial 1 bone) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Ceratobranchial bone that is bilaterally paired and articulates laterally with epibranchial 1 cartilage or bone.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001237") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001237") AnnotationAssertion(rdfs:label "ceratobranchial 1 bone") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (ceratobranchial 5 bone) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Ceratobranchial bone that is the most posterior, bilaterally paired ventral pharyngeal arch bone.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001239") AnnotationAssertion(Annotation( "TAO:0001239") "inferior pharyngeal bone") AnnotationAssertion(Annotation( "TAO:0001239") "lower pharyngeal") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001239") AnnotationAssertion(rdfs:comment "Synonym 'lower pharyngeal' from Weitzman, 1962. Synonym 'inferior pharyngeal bone' from Saxena, S.C. (1960). The cranial musculature of a hill-stream cyprinid fish Garra mullya (Sykes). Proceedings of the National Institute of Science in India. 26B(4): 176-188. Synonym 'pharyngeal arch' from Eastman, J.T. (1971). The pharyngeal bone musculature of the carp, Cyprinus carpio. Journal of Morphology. 134(2): 131-140.") AnnotationAssertion(rdfs:label "ceratobranchial 5 bone") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (ceratobranchial 4 bone) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Ceratobranchial bone that is bilaterally paired and articulates laterally with epibranchial 4 cartilage or bone.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001240") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001240") AnnotationAssertion(rdfs:label "ceratobranchial 4 bone") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (ceratobranchial 3 bone) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Ceratobranchial bone that is bilaterally paired and articulates laterally with epibranchial 3 cartilage or bone.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001241") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001241") AnnotationAssertion(rdfs:label "ceratobranchial 3 bone") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (ceratobranchial 2 bone) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Ceratobranchial bone that is bilaterally paired and articulates laterally with epibranchial 2 cartilage or bone.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001242") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001242") AnnotationAssertion(rdfs:label "ceratobranchial 2 bone") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (epibranchial 1 bone) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Epibranchial bone that is bilaterally paired and articulates laterally with ceratobranchial 1 cartilage or bone and medially with pharyngobranchial cartilage or bone.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001243") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001243") AnnotationAssertion(rdfs:label "epibranchial 1 bone") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (epibranchial 5 cartilage) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Epibranchial cartilage that is bilaterally paired and located at the articulation of epibranchial 4 cartilage or bone and the posterior tip of ceratobranchial 4 cartilage or bone.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001244") AnnotationAssertion(Annotation( "TAO:0001244") "accessory cartilage") AnnotationAssertion(Annotation( "TAO:0001244") "interbranchial") AnnotationAssertion(Annotation( "TAO:0001244") "interbranchial IV") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001244") AnnotationAssertion(rdfs:label "epibranchial 5 cartilage") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (epibranchial 4 bone) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Epibranchial bone that is bilaterally paired and articulates laterally with ceratobranchial 4 cartilage or bone and medially with pharyngobranchial cartilage or bone.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001245") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001245") AnnotationAssertion(rdfs:label "epibranchial 4 bone") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) SubClassOf( ObjectSomeValuesFrom( )) # Class: (epibranchial 2 bone) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Epibranchial bone that is bilaterally paired and articulates laterally with ceratobranchial 2 cartilage or bone and medially with pharyngobranchial cartilage or bone.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001246") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001246") AnnotationAssertion(rdfs:label "epibranchial 2 bone") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (epibranchial 3 bone) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Epibranchial bone that is bilaterally paired and articulates laterally with ceratobranchial 3 cartilage or bone and medially with pharyngobranchial cartilage or bone.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001247") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001247") AnnotationAssertion(rdfs:label "epibranchial 3 bone") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pharyngobranchial 2 bone) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Pharyngobranchial bone, located medial to the epibranchials and posteriorly adjacent to pharyngobranchial 1 element.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001250") AnnotationAssertion(Annotation( "TAO:0001250") "infrapharyngobranchial 2") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001250") AnnotationAssertion(rdfs:label "pharyngobranchial 2 bone") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pharyngobranchial 4 cartilage) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Most posterior pharyngobranchial cartilage, located medial to the epibranchials.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001251") AnnotationAssertion(Annotation( "TAO:0001251") "infrapharyngobranchial 4 cartilage") AnnotationAssertion(Annotation( "TAO:0001251") Annotation( ) "infrapharyngobranchials") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001251") AnnotationAssertion(rdfs:label "pharyngobranchial 4 cartilage") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) # Class: (pharyngobranchial 3 bone) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Pharyngobranchial bone, located medial to the epibranchials and posteriorly adjacent to pharyngobranchial 2 element.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001252") AnnotationAssertion(Annotation( "TAO:0001252") "infrapharyngobranchial 3") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001252") AnnotationAssertion(rdfs:label "pharyngobranchial 3 bone") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) SubClassOf( ObjectSomeValuesFrom( )) # Class: (neural arch 2) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Neural arch that is the second after the neurocranium.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001253") AnnotationAssertion(rdfs:label "neural arch 2") SubClassOf( ) # Class: (lateral floor plate) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001256") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001256") AnnotationAssertion(rdfs:label "lateral floor plate") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (medial floor plate) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "The medial portion of the spinal cord floor plate, located adjacent to the notochord.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001257") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001257") AnnotationAssertion(rdfs:label "medial floor plate") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete forebrain ventricle) AnnotationAssertion( "UBERON:0006284") AnnotationAssertion( "This class was obsoleted as it was discovered to be equivalent to an existing class") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001259") AnnotationAssertion(Annotation( "TAO:0001259") "forebrain vesicle") AnnotationAssertion(Annotation( "TAO:0001259") "prosencephalic ventricle") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001259") AnnotationAssertion(rdfs:label "obsolete forebrain ventricle") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (ovarian follicle stage I) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Stage I follicles (less than 140 microns) are primary growth stage. Selman et al, 1993.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001263") AnnotationAssertion(Annotation( "TAO:0001263") "previtillogenic ovarian follicle") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001263") AnnotationAssertion(rdfs:label "ovarian follicle stage I") SubClassOf( ) # Class: (ovarian follicle stage II) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Stage II follicles (140-340 microns) are cortical alveolus stage. Selman et al, 1993.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001265") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001265") AnnotationAssertion(rdfs:label "ovarian follicle stage II") SubClassOf( ) # Class: (ovarian follicle stage III) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Stage III (340-690 microns) are vitellogenesis. Selman et al, 1993.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001266") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001266") AnnotationAssertion(rdfs:label "ovarian follicle stage III") SubClassOf( ) # Class: (regenerating fin/limb) AnnotationAssertion(Annotation( ) "Fin or limb undergoing the process of regeneration.") AnnotationAssertion( "EFO:0003657") AnnotationAssertion( "TAO:0001269") AnnotationAssertion( "ZFA:0001269") AnnotationAssertion(Annotation( "ZFA:0001269") Annotation( ) "regenerating fins") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001269") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "regenerating fin/limb") SubClassOf( ) SubClassOf( ) # Class: (coronomeckelian) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Tendon bone located on the median side of the lower jaw, dorsal to Meckel's cartilage and medial to the angular. The coronomeckelian forms as an ossification of the tendon of the adductor mandibulae muscle. The coronomeckelian is a paired bone.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001274") AnnotationAssertion(Annotation( "TAO:0001274") "sesamoid articular") AnnotationAssertion(Annotation( "TAO:0001274") "sesamoid coronoid") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001274") AnnotationAssertion(rdfs:label "coronomeckelian") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (sublingual bone) AnnotationAssertion(Annotation( "TAO:je") "Endochondral bone that is the median element of the ventral hyoid arch, generally lying between the paired ventral hypohyals.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001275") AnnotationAssertion(rdfs:label "sublingual bone") SubClassOf( ) # Class: (branchiostegal ray 1) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Branchiostegal ray that is the anterior-most ray in the adult.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001279") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001279") AnnotationAssertion(rdfs:label "branchiostegal ray 1") SubClassOf( ) # Class: (branchiostegal ray 3) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Branchiostegal ray that is the third anterior-most ray in the adult.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001280") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001280") AnnotationAssertion(rdfs:label "branchiostegal ray 3") SubClassOf( ) # Class: (branchiostegal ray 2) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Branchiostegal ray that is the second anterior-most ray in the adult.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001281") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001281") AnnotationAssertion(rdfs:label "branchiostegal ray 2") SubClassOf( ) # Class: (obsolete intersegmental vessel) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001285") AnnotationAssertion(Annotation( "TAO:0001285") "Se") AnnotationAssertion(Annotation( "TAO:0001285") Annotation( ) "intersegmental vessels") AnnotationAssertion(Annotation( "TAO:0001285") "intersomitic vessels") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001285") AnnotationAssertion(rdfs:label "obsolete intersegmental vessel") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (posterior kidney) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001293") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001293") AnnotationAssertion(rdfs:label "posterior kidney") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (vagal placode 1) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001297") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001297") AnnotationAssertion(rdfs:label "vagal placode 1") SubClassOf( ) # Class: (vagal placode 2) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001298") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001298") AnnotationAssertion(rdfs:label "vagal placode 2") SubClassOf( ) # Class: (vagal placode 3) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001299") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001299") AnnotationAssertion(rdfs:label "vagal placode 3") SubClassOf( ) # Class: (vagal placode 4) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001300") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001300") AnnotationAssertion(rdfs:label "vagal placode 4") SubClassOf( ) # Class: (vagal ganglion 1) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001302") AnnotationAssertion(Annotation( "TAO:0001302") "gX1") AnnotationAssertion(Annotation( "TAO:0001302") "nodose ganglion 1") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001302") AnnotationAssertion(rdfs:label "vagal ganglion 1") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (vagal ganglion 2) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001303") AnnotationAssertion(Annotation( "TAO:0001303") "gX2") AnnotationAssertion(Annotation( "TAO:0001303") "nodose ganglion 2") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001303") AnnotationAssertion(rdfs:label "vagal ganglion 2") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (vagal ganglion 3) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001304") AnnotationAssertion(Annotation( "TAO:0001304") "gX3") AnnotationAssertion(Annotation( "TAO:0001304") "nodose ganglion 3") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001304") AnnotationAssertion(rdfs:label "vagal ganglion 3") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (vagal ganglion 4) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001305") AnnotationAssertion(Annotation( "TAO:0001305") "gX4") AnnotationAssertion(Annotation( "TAO:0001305") "nodose ganglion 4") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001305") AnnotationAssertion(rdfs:label "vagal ganglion 4") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete dorsoventral diencephalic tract) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "A tract originating in the epiphysis and fasiculating with the tract of the postoptic commissure. Ross et al, 1992.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001322") AnnotationAssertion(Annotation( "TAO:0001322") "DVDT") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001322") AnnotationAssertion(rdfs:label "obsolete dorsoventral diencephalic tract") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (enteric musculature) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001324") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001324") AnnotationAssertion(rdfs:label "enteric musculature") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (sublingual dorsal and ventral fused) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Sublingual that is the single element resulting from the fusion of the sublingual dorsal ossification and sublingual ventral ossification.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001333") AnnotationAssertion(rdfs:label "sublingual dorsal and ventral fused") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (supradorsal) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Supradorsals are small paired nodules of cartilage positioned at the distal ends of neural arches and the proximal end of neural spines (Arratia et al., 2001).") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001335") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001335") AnnotationAssertion(rdfs:label "supradorsal") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete spermatogonia) AnnotationAssertion( "CL:0000020") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0009007") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001337") AnnotationAssertion(rdfs:label "obsolete spermatogonia") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete nucleus of the tract of the anterior commissure) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Telencephalic nucleus containing the cell bodies of neurons whose axons form the anterior commissure.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001339") AnnotationAssertion(Annotation( "TAO:0001339") "ntAC") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001339") AnnotationAssertion(rdfs:label "obsolete nucleus of the tract of the anterior commissure") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (nucleus of the tract of the postoptic commissure) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "The nucleus containing the cell bodies of neurons whose axons form the postoptic commissure.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001340") AnnotationAssertion(Annotation( "TAO:0001340") "ntPOC") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001340") AnnotationAssertion(rdfs:label "nucleus of the tract of the postoptic commissure") SubClassOf( ) # Class: (intervening zone) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "A zone of delayed differentiation at the midbrainhindbrain boundary. The IZ separates midbrain from anterior hindbrain neuronal clusters and has been described in all vertebrates. Geling et al, 2003.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001341") AnnotationAssertion(Annotation( "TAO:0001341") "IZ") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001341") AnnotationAssertion(rdfs:label "intervening zone") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (presumptive intervening zone) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001342") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001342") AnnotationAssertion(rdfs:label "presumptive intervening zone") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (telencephalon diencephalon boundary) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001343") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001343") AnnotationAssertion(rdfs:label "telencephalon diencephalon boundary") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (stratum fibrosum et griseum superficiale) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001347") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001347") AnnotationAssertion(rdfs:label "stratum fibrosum et griseum superficiale") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (stratum marginale) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001348") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001348") AnnotationAssertion(rdfs:label "stratum marginale") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (stratum opticum) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001349") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001349") AnnotationAssertion(rdfs:label "stratum opticum") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (stratum periventriculare) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001352") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001352") AnnotationAssertion(rdfs:label "stratum periventriculare") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete mesencephalic tegmentum) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001354") AnnotationAssertion(rdfs:label "obsolete mesencephalic tegmentum") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (alar plate midbrain) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001357") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001357") AnnotationAssertion(rdfs:label "alar plate midbrain") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete pineal complex) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001359") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001359") AnnotationAssertion(rdfs:label "obsolete pineal complex") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete parapineal organ) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "An unpaired left-sided accessory organ which plays a role in establishing lateral brain left right asymmetry. Gamse et al, 2003.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001360") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001360") AnnotationAssertion(rdfs:label "obsolete parapineal organ") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (basiventral) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Basiventrals are bilaterally paired cartilages lateral to the notochord which are replaced by ossified parapophyses or hemal arches.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001361") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "TAO:0001361") "arcualia") AnnotationAssertion( "UBERON:2001361") AnnotationAssertion(rdfs:label "basiventral") SubClassOf( ) # Class: (tract of the postoptic commissure) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001366") AnnotationAssertion(Annotation( "TAO:0001366") "TPOC") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001366") AnnotationAssertion(rdfs:label "tract of the postoptic commissure") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pancreatic system) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001371") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001371") AnnotationAssertion(rdfs:label "pancreatic system") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete migratory slow muscle precursor cell) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Cells that initially are located adjacent to the spinal cord and notochord along that migrate from their initial medial position radially through the myotome to the lateral surface of the somites.") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001373") AnnotationAssertion(Annotation( "TAO:0001373") Annotation( ) "migratory slow muscle precursor cells") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001373") AnnotationAssertion(rdfs:comment "likely very zebrafish specific so being obsoleted for now.") AnnotationAssertion(rdfs:label "obsolete migratory slow muscle precursor cell") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (axial hypoblast) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001378") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001378") AnnotationAssertion(rdfs:label "axial hypoblast") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (epibranchial bone uncinate process) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Epibranchials 1-3 in adults are compound elements formed by the fusion of epibranchial cartilages and the so-called uncinate processes. Posteromedially directed uncinate processes develop on the posterior edge of epibranchials 1-3. These appear as separate centers of chondrification (6.2 mm) that later fuse laterally to the posterior edges of the epibranchial cartilages (6.8 mm).") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001382") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001382") AnnotationAssertion(rdfs:label "epibranchial bone uncinate process") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (epithelial mesenchymal boundary of regenerating fin/limb) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An epithelial-mesenchymal boundary that is part of a regenerating fin/limb.") AnnotationAssertion( "TAO:0001388") AnnotationAssertion( "ZFA:0001388") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001388") AnnotationAssertion(rdfs:label "epithelial mesenchymal boundary of regenerating fin/limb") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (regeneration epithelium of fin/limb) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "An epithelium that is part of a regenerating fin/limb.") AnnotationAssertion(Annotation( "ZFA:0001389") "epidermal cap") AnnotationAssertion(Annotation( "ZFA:0001389") "wound epidermis") AnnotationAssertion(Annotation( "ZFA:0001389") "wound epithelium") AnnotationAssertion( "EFO:0003682") AnnotationAssertion( "TAO:0001389") AnnotationAssertion( "ZFA:0001389") AnnotationAssertion( "epidermal cap of fin") AnnotationAssertion( "wound epidermis of fin") AnnotationAssertion( "wound epithelium of fin") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001389") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "regeneration epithelium of fin/limb") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (parapophysis 1) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Parapophysis that is the lateral projections from the first centrum in cyprinids, absent in catostomids, and absent in characiphysans (Fink and Fink, 1996).") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001392") AnnotationAssertion(Annotation( "TAO:0001392") "basipophysis 1") AnnotationAssertion(Annotation( "TAO:0001392") "lateral process 1") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001392") AnnotationAssertion(rdfs:label "parapophysis 1") SubClassOf( ) SubClassOf( ) # Class: (parapophysis 2) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Parapophysis that is lateral projection from the second centrum, absent in Siluriformes (Fink and Fink, 1996).") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001393") AnnotationAssertion(Annotation( "TAO:0001393") "basipophysis") AnnotationAssertion(Annotation( "TAO:0001393") "lateral process 2") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001393") AnnotationAssertion(rdfs:label "parapophysis 2") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (neural arch 3) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Neural arch 3 is expanded and fused to supraneural 3 as part of a neural complex roofing and protecting the neural canal.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001394") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001394") AnnotationAssertion(rdfs:label "neural arch 3") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (neural arch 4) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Neural arch 4 is expanded and fused to supraneural 3 as part of the neural complex. A reduced neural spine projects from the posterior margin of the neural complex.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001395") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001395") AnnotationAssertion(rdfs:label "neural arch 4") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (parapophysis + rib of vertebra 4) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "The parapophysis + rib, fused to the centrum, extends laterally then angles anteroventrally. A thin plate, the os suspensorium fuses to its median surface.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001396") AnnotationAssertion(Annotation( "TAO:0001396") "fourth pleural rib plus parapophysis") AnnotationAssertion(Annotation( "TAO:0001396") "fourth rib plus parapophysis") AnnotationAssertion(Annotation( "TAO:0001396") "parapophysis/rib") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001396") AnnotationAssertion(rdfs:label "parapophysis + rib of vertebra 4") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (supraethmoid) AnnotationAssertion(Annotation( "TAO:GA_TG"^^xsd:string) "Dermal bone that first appears as paired ossifications in the membrane (dermis) dorsolateral to the ethmoid cartilage and anterolateral to the lateral ethmoids, later having the appearance of one butterfly-shaped element. Fused to the anterodorsal margin of the mesethmoid. Bordered anteriorly by the kinethmoid and posteriorly by the frontal.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001403") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001403") AnnotationAssertion(rdfs:label "supraethmoid") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (preethmoid bone) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Small rounded to egg-shaped cartilage bone that sits in an anterolateral depression on the prevomer. Articulates with the autopalatine in all cypriniforms.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001404") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001404") AnnotationAssertion(rdfs:label "preethmoid bone") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (kinethmoid bone) AnnotationAssertion(Annotation( "TAO:GA_TG"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "Sesamoid bone located in the premaxillary-ethmoid ligament, between the mesethmoid and the premaxilla. The kinethmoid is an unpaired median bone.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001406") AnnotationAssertion(Annotation( "TAO:0001406") "kinethmoideum bone") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001406") AnnotationAssertion(rdfs:comment "The kinethmoid is part of the protrusion mechanism of the upper jaw and is restricted to cypriniform fishes.") AnnotationAssertion(rdfs:label "kinethmoid bone") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (infraorbital 2) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Infraorbital that is the second bone of the infraorbital series.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001407") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001407") AnnotationAssertion(rdfs:label "infraorbital 2") SubClassOf( ) # Class: (infraorbital 3) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Infraorbital that is the third bone of the infraorbital series.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001408") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001408") AnnotationAssertion(rdfs:label "infraorbital 3") SubClassOf( ) # Class: (infraorbital 4) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Infraorbital that is the fourth bone of the infraorbital series.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001409") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001409") AnnotationAssertion(rdfs:label "infraorbital 4") SubClassOf( ) # Class: (epiotic) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Endochondral bone that borders that medial edge of the posttemporal fossa. The epiotics are sutured to parietals and supraoccipital dorsally, the exoccipitals ventrally and the pterotics laterally. The epiotic is a paired bone.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "UBERON:2000659") AnnotationAssertion( "ZFA:0001412") AnnotationAssertion(Annotation( "TAO:0001412") "epioccipital") AnnotationAssertion(Annotation( "TAO:0001412") Annotation( ) "epioccipitals") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001412") AnnotationAssertion(rdfs:label "epiotic") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) SubClassOf( ObjectSomeValuesFrom( )) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete dorsal fin lepidotrichium) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Lepidotrichium which is part of the dorsal fin.") AnnotationAssertion( "UBERON:4000177") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion(Annotation( "TAO:0001418") Annotation( ) "dorsal fin lepidotrichia") AnnotationAssertion(Annotation( "TAO:0001418") "dorsal fin ray") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001418") AnnotationAssertion(rdfs:label "obsolete dorsal fin lepidotrichium") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete anal fin lepidotrichium) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Lepidotrichium which is part of the anal fin.") AnnotationAssertion( "UBERON:4000176") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion(Annotation( "TAO:0001421") Annotation( ) "anal fin lepidotrichia") AnnotationAssertion(Annotation( "TAO:0001421") "anal fin ray") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001421") AnnotationAssertion(rdfs:label "obsolete anal fin lepidotrichium") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (basal plate cartilage) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001425") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001425") AnnotationAssertion(rdfs:label "basal plate cartilage") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) # Class: (posterior naris) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001426") AnnotationAssertion(Annotation( "TAO:0001426") "posterior nostril") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001426") AnnotationAssertion(rdfs:label "posterior naris") SubClassOf( ) # Class: (anterior naris) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001427") AnnotationAssertion(Annotation( "TAO:0001427") "anterior nostril") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001427") AnnotationAssertion(rdfs:label "anterior naris") SubClassOf( ) # Class: (olfactory rosette) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001428") AnnotationAssertion(Annotation( "TAO:0001428") "nasal rosette") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001428") AnnotationAssertion(rdfs:label "olfactory rosette") SubClassOf( ) # Class: (pneumatic duct) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "A duct connecting the esophagus to the posterior chamber of the swim bladder. Finney et al, 2006.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001430") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001430") AnnotationAssertion(rdfs:label "pneumatic duct") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (primitive olfactory epithelium) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001431") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001431") AnnotationAssertion(rdfs:label "primitive olfactory epithelium") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (postcranial axial cartilage) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Cartilage which is part of the axial skeleton.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001457") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001457") AnnotationAssertion(rdfs:label "postcranial axial cartilage") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete somite border) AnnotationAssertion( "UBERON:0015178") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001462") AnnotationAssertion(Annotation( "TAO:0001462") Annotation( ) "somite border cell") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001462") AnnotationAssertion(rdfs:label "obsolete somite border") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (melanophore stripe) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001463") AnnotationAssertion( "bar") AnnotationAssertion( "melanophore bar") AnnotationAssertion(Annotation( "TAO:0001463") "stripe") AnnotationAssertion(Annotation( "TAO:0001463") Annotation( ) "stripes") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001463") AnnotationAssertion(rdfs:label "melanophore stripe") SubClassOf( ) # Class: (pharyngeal mesoderm) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001467") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001467") AnnotationAssertion(rdfs:label "pharyngeal mesoderm") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete deep blastomere) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Cells (completely cleaved), located underneath the superficial blastomeres and internal to the marginal blastomeres. Kimmel et al, 1995.") AnnotationAssertion( "ZFA:0001473") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001473") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001473") AnnotationAssertion(rdfs:label "obsolete deep blastomere") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (sublingual dorsal and ventral separate) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Anatomical cluster consisting of the paired sublingual dorsal ossification and sublingual ventral ossification.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001474") AnnotationAssertion(rdfs:label "sublingual dorsal and ventral separate") SubClassOf( ) # Class: (sublingual dorsal ossification) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Sublingual that is the dorsal element paired with the sublingual ventral ossification.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001475") AnnotationAssertion(rdfs:label "sublingual dorsal ossification") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (sublingual ventral ossification) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Sublingual that is the ventral element paired with the sublingual dorsal ossification.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001476") AnnotationAssertion(rdfs:label "sublingual ventral ossification") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete superficial blastomere) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Cells (completely cleaved), located at the surface of the blastodisc, above the deep blastomeres. Kimmel et al, 1995.") AnnotationAssertion( "ZFA:0001484") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001484") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001484") AnnotationAssertion(rdfs:label "obsolete superficial blastomere") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (epiphyseal bar) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Bilaterally paired medial bar of cartilage formed at midorbit through medial chondrification from triangles of cartilage that later form the junction of the taeniae marginales anterior, taeniae marginales posterior and the epiphyseal bar.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001502") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001502") AnnotationAssertion(rdfs:label "epiphyseal bar") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) # Class: (occipital arch cartilage) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Cranial cartilage which is a paired anterodorsal projection of the posterior end of the parachordal cartilage. It lies lateral to the notochord, just anterior to the posterior tip of the otic capsule. The bilaterally paired occipital arch cartilages fuse anterodorsally to the posterior edges of the auditory capsules and meet medially as the tectum synoticum (by 12 dpf).") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001504") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001504") AnnotationAssertion(rdfs:label "occipital arch cartilage") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) # Class: (taenia marginalis anterior) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Cartilage bar (bilaterally paired) that grows anteroventrally from the epiphyseal bar to join the anterolatera1 edge of the ethmoid plate.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001505") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "TAO:0001505") "orbital cartilage") AnnotationAssertion( "UBERON:2001505") AnnotationAssertion(rdfs:label "taenia marginalis anterior") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) # Class: (trabecula communis) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Cartilage formed via medial fusion between bilaterally paired trabecula crani.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001508") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001508") AnnotationAssertion(rdfs:label "trabecula communis") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) # Class: (interhyal cartilage) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Pharyngeal arch cartilage that is bilaterally paired and articulates dorsally with the hyosymplectic cartilage or the articulation of the hyomandibula and symplectic.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "UBERON:2000218") AnnotationAssertion( "ZFA:0001511") AnnotationAssertion(Annotation( "TAO:0001511") "stylohyal cartilage") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001511") AnnotationAssertion(rdfs:comment "It articulates ventrally with the posterior end of the ceratohyal cartilage or the posterior ceratohyal.") AnnotationAssertion(rdfs:label "interhyal cartilage") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) # Class: (taenia marginalis posterior) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Cartilage bar (bilaterally paired) that is first visible as an anterior extension of the auditory capsule. It grows anteriorly toward the middle of the orbit where it is connected to its mate on the other side by the epiphyseal bar.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001515") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "TAO:0001515") "orbital cartilage") AnnotationAssertion( "UBERON:2001515") AnnotationAssertion(rdfs:label "taenia marginalis posterior") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) # Class: (ceratobranchial cartilage) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Pharyngeal arch cartilage that forms the largest skeletal element of the ventral branchial arches.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001516") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001516") AnnotationAssertion(rdfs:label "ceratobranchial cartilage") SubClassOf( ) SubClassOf( ) # Class: (ceratobranchial 2 cartilage) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Ceratobranchial cartilage that is bilaterally paired and articulates laterally with epibranchial 2 cartilage or bone.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001517") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001517") AnnotationAssertion(rdfs:label "ceratobranchial 2 cartilage") SubClassOf( ) SubClassOf( ) # Class: (ceratobranchial 3 cartilage) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Ceratobranchial cartilage that is bilaterally paired and articulates laterally with epibranchial 3 cartilage or bone.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001518") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001518") AnnotationAssertion(rdfs:label "ceratobranchial 3 cartilage") SubClassOf( ) SubClassOf( ) # Class: (ceratobranchial 4 cartilage) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Ceratobranchial cartilage that is bilaterally paired and articulates laterally with epibranchial 4 cartilage or bone.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001519") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001519") AnnotationAssertion(rdfs:label "ceratobranchial 4 cartilage") SubClassOf( ) SubClassOf( ) # Class: (ceratobranchial 1 cartilage) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Ceratobranchial cartilage that is bilaterally paired and articulates laterally with epibranchial 1 cartilage or bone.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001520") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001520") AnnotationAssertion(rdfs:label "ceratobranchial 1 cartilage") SubClassOf( ) SubClassOf( ) # Class: (ceratobranchial 5 cartilage) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Ceratobranchial cartilage that is the most posterior, bilaterally paired ventral pharyngeal arch cartilage.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001521") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001521") AnnotationAssertion(rdfs:label "ceratobranchial 5 cartilage") SubClassOf( ) SubClassOf( ) # Class: (hypobranchial cartilage) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Pharyngeal arch cartilage that is bilaterally paired and articulates medially with a median skeletal element and laterally with a ceratobranchial cartilage or bone.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001522") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001522") AnnotationAssertion(rdfs:comment "The hypobranchial cartilage usually articulates medially with a basibranchial bone or cartilage.") AnnotationAssertion(rdfs:label "hypobranchial cartilage") SubClassOf( ) SubClassOf( ) # Class: (hypobranchial 4 cartilage) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Hypobranchial cartilage that is bilaterally paired and articulates laterally with ceratobranchial 4 cartilage or bone.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001523") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001523") AnnotationAssertion(rdfs:label "hypobranchial 4 cartilage") SubClassOf( ) SubClassOf( ) # Class: (hypobranchial 1 cartilage) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Hypobranchial cartilage that is bilaterally paired and articulates laterally with ceratobranchial 1 cartilage or bone.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001524") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001524") AnnotationAssertion(rdfs:label "hypobranchial 1 cartilage") SubClassOf( ) SubClassOf( ) # Class: (hypobranchial 2 cartilage) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Hypobranchial cartilage that is bilaterally paired and articulates laterally with ceratobranchial 2 cartilage or bone.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001525") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001525") AnnotationAssertion(rdfs:label "hypobranchial 2 cartilage") SubClassOf( ) SubClassOf( ) # Class: (hypobranchial 3 cartilage) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Hypobranchial cartilage that is bilaterally paired and articulates laterally with ceratobranchial 3 cartilage or bone.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001526") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001526") AnnotationAssertion(rdfs:label "hypobranchial 3 cartilage") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) # Class: (epibranchial cartilage) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Pharyngeal arch cartilage that is bilaterally paired and articulates laterally with ceratobranchial cartilage or bone.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001527") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001527") AnnotationAssertion(rdfs:label "epibranchial cartilage") SubClassOf( ) SubClassOf( ) # Class: (epibranchial 1 cartilage) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Epibranchial cartilage that is bilaterally paired and articulates laterally with ceratobranchial 1 cartilage or bone.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001528") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001528") AnnotationAssertion(rdfs:label "epibranchial 1 cartilage") SubClassOf( ) SubClassOf( ) # Class: (epibranchial 3 cartilage) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Epibranchial cartilage that is bilaterally paired and articulates laterally with ceratobranchial 3 cartilage or bone.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001529") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001529") AnnotationAssertion(rdfs:label "epibranchial 3 cartilage") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) # Class: (epibranchial 2 cartilage) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Epibranchial cartilage that is bilaterally paired and articulates laterally with ceratobranchial 2 cartilage or bone.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001530") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001530") AnnotationAssertion(rdfs:label "epibranchial 2 cartilage") SubClassOf( ) SubClassOf( ) # Class: (epibranchial 4 cartilage) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Epibranchial cartilage that is bilaterally paired and articulates laterally with ceratobranchial 4 cartilage or bone.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001531") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001531") AnnotationAssertion(rdfs:label "epibranchial 4 cartilage") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) # Class: (sublingual dorsal cartilage) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Sublingual cartilage that is the dorsal element paired with the sublingual ventral cartilage.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001532") AnnotationAssertion(rdfs:label "sublingual dorsal cartilage") SubClassOf( ) # Class: (pharyngobranchial cartilage) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Paired cartilages that project medially from the medial tips of epibranchials.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001533") AnnotationAssertion( "infrapharyngobranchial cartilage") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001533") AnnotationAssertion(rdfs:label "pharyngobranchial cartilage") SubClassOf( ) SubClassOf( ) # Class: (pharyngobranchial 3 cartilage) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Pharyngobranchial cartilage, located medial to the epibranchials and posteriorly adjacent to pharyngobranchial 2 element.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001534") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001534") AnnotationAssertion(rdfs:label "pharyngobranchial 3 cartilage") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) # Class: (pharyngobranchial 2 cartilage) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Pharyngobranchial cartilage, located medial to the epibranchials and posteriorly adjacent to pharyngobranchial 1 element.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001536") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001536") AnnotationAssertion(rdfs:label "pharyngobranchial 2 cartilage") SubClassOf( ) SubClassOf( ) # Class: (mesocoracoid cartilage) AnnotationAssertion(Annotation( "TAO:GA_TG"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "Pectoral fin cartilage that is part of the embryonic primary pectoral girdle from which the mesocoracoid bone will ossify endochondrally.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001537") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "TAO:0001537") "mesocoracoideum") AnnotationAssertion( "UBERON:2001537") AnnotationAssertion(rdfs:label "mesocoracoid cartilage") SubClassOf( ) SubClassOf( ) # Class: (basipterygium cartilage) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Bilaterally paired small, rodlike cartilages on the ventral surface of the abdomen (present at 7.9 mm). Their posterior tips expand laterally, forming L-shaped cartilages. Medially, a posterior spur of cartilage develops, which will later ossify as the ischiac process (Weitzman 1962).") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001539") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001539") AnnotationAssertion(rdfs:label "basipterygium cartilage") SubClassOf( ) SubClassOf( ) # Class: (sublingual cartilage) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Pharyngeal arch cartilage that is the median cartilage of the ventral hyoid arch, generally lying between the paired ventral hypohyals.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001544") AnnotationAssertion(rdfs:label "sublingual cartilage") SubClassOf( ) # Class: (sublingual ventral cartilage) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Sublingual cartilage that is the ventral element paired with the sublingual dorsal cartilage.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001545") AnnotationAssertion(rdfs:label "sublingual ventral cartilage") SubClassOf( ) # Class: (neural spine 4) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Neural spine that is associated with the fourth vertebra.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001600") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001546") AnnotationAssertion(rdfs:label "neural spine 4") SubClassOf( ) # Class: (obsolete caudal fin lepidotrichium) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Lepidotrichium which is part of the caudal fin.") AnnotationAssertion( "UBERON:4000174") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion(Annotation( "TAO:0001550") "caudal fin ray") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001550") AnnotationAssertion(rdfs:label "obsolete caudal fin lepidotrichium") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete pectoral fin lepidotrichium) AnnotationAssertion(Annotation( "TAO:GA_TG"^^xsd:string) Annotation( "ZFIN:curator"^^xsd:string) "Lepidotrichium which is part of the pectoral fin, forming the pectoral fin skeleton and articulating with the pectoral radials. A pectoral lepidotrichium is composed of two hemitrichia that surround bundles of actinotrichia distally.") AnnotationAssertion( "UBERON:4000175") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion(Annotation( "TAO:0001551") Annotation( ) "pectoral fin lepidotrichia") AnnotationAssertion(Annotation( "TAO:0001551") "pectoral fin ray") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001551") AnnotationAssertion(rdfs:comment "Each pectoral lepidotrichium may be unsegmented (e.g., spine), segmented but unbranched (e.g., leading ray) or segmented and branched. Definition of lepidotrichium by Schultze and Arratia (1989: 217). For additional information about lepidotrichia see Arratia et al. 2001 and Arratia 2008.") AnnotationAssertion(rdfs:label "obsolete pectoral fin lepidotrichium") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete pelvic fin lepidotrichium) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Lepidotrichium which is part of the pelvic fin.") AnnotationAssertion( "UBERON:4000173") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion(Annotation( "TAO:0001552") Annotation( ) "pelvic fin lepidotrichia") AnnotationAssertion(Annotation( "TAO:0001552") "pelvic fin ray") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001552") AnnotationAssertion(rdfs:label "obsolete pelvic fin lepidotrichium") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete lepidotrichium) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Dermal bone that is rod-like, formed and usually contained in a fin membrane, and jointed to or adjacent to distal radials. Lepidotrichia are formed from paired hemitrichia surrounding actinotrichia. There are usually two more lepidotrichia than distal radials.") AnnotationAssertion( "UBERON:4000172") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion(Annotation( "TAO:0001554") "fin ray") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001554") AnnotationAssertion(rdfs:label "obsolete lepidotrichium") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete oocyte stage II) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "CL:0000023") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001565") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001565") AnnotationAssertion(rdfs:label "obsolete oocyte stage II") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete oocyte stage III) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "CL:0000023") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001566") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001566") AnnotationAssertion(rdfs:label "obsolete oocyte stage III") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete oocyte stage I) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "CL:0000023") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001567") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001567") AnnotationAssertion(rdfs:label "obsolete oocyte stage I") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete oocyte stage IV) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "CL:0000023") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001568") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001568") AnnotationAssertion(rdfs:label "obsolete oocyte stage IV") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete oocyte stage V) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "CL:0000023") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001569") AnnotationAssertion(Annotation( "TAO:0001569") "mature egg") AnnotationAssertion(Annotation( "TAO:0001569") "unactivated egg") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001569") AnnotationAssertion(rdfs:label "obsolete oocyte stage V") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete unfertilized egg) AnnotationAssertion( "CL:0000025") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001570") AnnotationAssertion(Annotation( "TAO:0001570") "activated oocyte") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001570") AnnotationAssertion(rdfs:label "obsolete unfertilized egg") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (postovulatory follicle) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001571") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001571") AnnotationAssertion(rdfs:label "postovulatory follicle") SubClassOf( ) # Class: (premaxilla ascending process) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Process of the premaxilla that extends posteriorly and overlays the mesethmoid.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001577") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001577") AnnotationAssertion(rdfs:label "premaxilla ascending process") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (non-Weberian precaudal vertebra) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001582") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001582") AnnotationAssertion(rdfs:label "non-Weberian precaudal vertebra") SubClassOf( ) # Class: (preural centrum 1+ ural centrum 1) AnnotationAssertion(Annotation( "TAO:GA_TG"^^xsd:string) "Urostyle that is the result of fusion of preural centrum 1 with the first ural centrum (of polyural terminology).") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001583") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001583") AnnotationAssertion(rdfs:label "preural centrum 1+ ural centrum 1") SubClassOf( ) # Class: (maxilla ascending process) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Process that is the upper portion of the maxilla that rests on the posterior surface of the lateral portion of the premaxilla.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion(Annotation( "TAO:0001603") "maxilla ascending arm") AnnotationAssertion(Annotation( "TAO:0001603") "maxilla upper arm") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001603") AnnotationAssertion(rdfs:comment "Synonyms maxilla ascending arm used in Zanata and Vari 2005, and maxilla upper arm used in Weitzman 1962") AnnotationAssertion(rdfs:label "maxilla ascending process") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (caudal scute series) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001605") AnnotationAssertion(rdfs:label "caudal scute series") SubClassOf( ) # Class: (basipterygoid process of parasphenoid) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Process that is the paired process of the parasphenoid that articulates with the suspensorium.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion(Annotation( "TAO:0001607") "basipterygoid process") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001607") AnnotationAssertion(rdfs:label "basipterygoid process of parasphenoid") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pharyngobranchial 2 bone uncinate process) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Bony projection that is part of the pharyngobranchial 2 bone.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001609") AnnotationAssertion(rdfs:label "pharyngobranchial 2 bone uncinate process") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (sphenotic spine) AnnotationAssertion(Annotation( "TAO:GA_TG"^^xsd:string) "Process of the sphenotic. The process may project antero-laterally or laterally or ventro-laterally and it has different development in different fish groups. The sphenotic spine is paired.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion(Annotation( "TAO:0001615") "sphenotic process") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001615") AnnotationAssertion(rdfs:label "sphenotic spine") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (lagenar capsule) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Anatomical cluster that consists of a bulla formed by the exoccipital and basioccipital bones, and surrounds the lagena.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001627") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001620") AnnotationAssertion(rdfs:label "lagenar capsule") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (odontode) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Multi-tissue structure composed of enameloid and dentine surrounding a pulp cavity, and found either attached to dermal bone or freely in the skin.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion(Annotation( "TAO:0001622") Annotation( ) "odontodes") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001622") AnnotationAssertion(rdfs:label "odontode") SubClassOf( ) # Class: (type 1 odontode) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Odontode that is attached to dermal bone.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001623") AnnotationAssertion(rdfs:comment "Term from Schaefer & Buitrago-Suarez 2002.") AnnotationAssertion(rdfs:label "type 1 odontode") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (type 2 odontode) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Odontode that is attached to the skin and without association to dermal bone.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001624") AnnotationAssertion(rdfs:comment "Term from Schaefer & Buitrago-Suarez 2002.") AnnotationAssertion(rdfs:label "type 2 odontode") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (premaxillary tooth) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Tooth that is attached to the premaxilla.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001626") AnnotationAssertion(rdfs:label "premaxillary tooth") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (ectopterygoid tooth) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Tooth that is attached to the ectopterygoid bone.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001632") AnnotationAssertion(rdfs:label "ectopterygoid tooth") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (entopterygoid tooth) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Tooth that is attached to the entopterygoid bone.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion(Annotation( "TAO:0001633") "mesopterygoid tooth") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001633") AnnotationAssertion(rdfs:label "entopterygoid tooth") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pharyngobranchial 1 cartilage) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Most anterior pharyngobranchial cartilage, located medial to the epibranchials.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion(Annotation( "TAO:0001634") "infrapharyngobranchial 1 cartilage") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001634") AnnotationAssertion(rdfs:label "pharyngobranchial 1 cartilage") SubClassOf( ) SubClassOf( ) # Class: (pharyngobranchial 1 bone) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Most anterior pharyngobranchial bone, located medial to the epibranchials.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion(Annotation( "TAO:0001635") "infrapharyngobranchial 1 bone") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001635") AnnotationAssertion(rdfs:label "pharyngobranchial 1 bone") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pharyngobranchial 4 bone) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Most posterior pharyngobranchial bone, located medial to the epibranchials.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion(Annotation( "TAO:0001636") "infrapharyngobranchial 4 bone") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001636") AnnotationAssertion(rdfs:label "pharyngobranchial 4 bone") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) SubClassOf( ObjectSomeValuesFrom( )) # Class: (notochordal ossification) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Perichordal bone that surrounds the anterior tip of the notochord.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001631") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001640") AnnotationAssertion(rdfs:label "notochordal ossification") SubClassOf( ) # Class: (pharyngeal tooth plate) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Dermal bone of the pharyngeal arches usually bearing teeth.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion(Annotation( "TAO:0001647") "pharyngeal toothplate") AnnotationAssertion( "tooth plate") AnnotationAssertion( "toothplate") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001647") AnnotationAssertion(rdfs:label "pharyngeal tooth plate") SubClassOf( ) # Class: (basihyal tooth plate) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Pharyngeal tooth plate that lies dorsal to the basihyal cartilage or bone.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion(Annotation( "TAO:0001648") "basihyal toothplate") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001648") AnnotationAssertion(rdfs:label "basihyal tooth plate") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (basihyal tooth) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Tooth that is attached to the basihyal tooth plate.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001649") AnnotationAssertion(rdfs:label "basihyal tooth") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pharyngobranchial 2 tooth plate) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Pharyngeal tooth plate that lies ventral to pharyngobranchial 2 bone.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion(Annotation( "TAO:0001650") "pharyngobranchial 2 toothplate") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001650") AnnotationAssertion(rdfs:label "pharyngobranchial 2 tooth plate") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pharyngobranchial 3 tooth plate) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Pharyngeal tooth plate that lies ventral to pharyngobranchial 3 bone.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion(Annotation( "TAO:0001652") "pharyngobranchial 3 toothplate") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001652") AnnotationAssertion(rdfs:label "pharyngobranchial 3 tooth plate") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (upper pharyngeal 4 tooth plate) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Pharyngeal tooth plate that lies ventral to pharyngobranchial 4, and located anterior to upper pharyngeal 5 tooth plate.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion(Annotation( "TAO:0001654") "upper pharyngeal 4 toothplate") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001654") AnnotationAssertion(rdfs:label "upper pharyngeal 4 tooth plate") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (upper pharyngeal 5 tooth plate) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Pharyngeal toothplate that lies ventral to pharyngobranchial 4, and located posterior to upper pharyngeal 4 tooth plate.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion(Annotation( "TAO:0001656") "upper pharyngeal 5 toothplate") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001656") AnnotationAssertion(rdfs:label "upper pharyngeal 5 tooth plate") SubClassOf( ) # Class: (upper pharyngeal 5 tooth) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Tooth that is attached to the upper pharyngeal 5 tooth plate.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001657") AnnotationAssertion(rdfs:label "upper pharyngeal 5 tooth") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (upper pharyngeal tooth plate) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Pharyngeal tooth plate that lies ventral to pharyngobranchials 3 and 4.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion(Annotation( "TAO:0001658") "upper pharyngeal toothplate") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001658") AnnotationAssertion(rdfs:comment "This represents the condition found in catfishes.") AnnotationAssertion(rdfs:label "upper pharyngeal tooth plate") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) # Class: (basibranchial tooth plate) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Pharyngeal tooth plate that lies dorsal to basibranchials 1-3.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion(Annotation( "TAO:0001661") Annotation( ) "basibranchial 1-3 toothplates") AnnotationAssertion(Annotation( "TAO:0001661") "basibranchial toothplate") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001661") AnnotationAssertion(rdfs:label "basibranchial tooth plate") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (basibranchial 4 tooth plate) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Pharyngeal tooth plate that lies dorsal to basibranchial 4 bone.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion(Annotation( "TAO:0001662") "basibranchial 4 toothplate") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001662") AnnotationAssertion(rdfs:label "basibranchial 4 tooth plate") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (basibranchial 2 tooth plate) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Pharyngeal tooth plate that lies dorsal to basibranchial 2 bone.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion(Annotation( "TAO:0001664") "basibranchial 2 toothplate") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001664") AnnotationAssertion(rdfs:label "basibranchial 2 tooth plate") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (rudimentary neural arch) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Neural arch on the urostyle. It does not support a neural spine. Sanger and McCune 2002.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001641") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001666") AnnotationAssertion(rdfs:label "rudimentary neural arch") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (infraorbital 6) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Infraorbital that is the sixth bone of the infraorbital series.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "TAO:0001674") "dermosphenotic") AnnotationAssertion( "UBERON:2001674") AnnotationAssertion(rdfs:label "infraorbital 6") SubClassOf( ) # Class: (mesethmoid cornu) AnnotationAssertion(Annotation( "TAO:pem") "Bony projection that extends from the mesethmoid anteriorly. Mesethmoid cornua are paired processes each articulating with its ipsilateral premaxilla and both cornua bounding a median mesethmoid cleft.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion(Annotation( "TAO:0001675") "cornu") AnnotationAssertion(Annotation( "TAO:0001675") Annotation( ) "cornua") AnnotationAssertion(Annotation( "TAO:0001675") Annotation( ) "cornuae") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001675") AnnotationAssertion(rdfs:label "mesethmoid cornu") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (mesethmoid-premaxillary joint) AnnotationAssertion(Annotation( "TAO:pem") "Joint that articulates the mesethmoid and premaxilla. Mesethmoid-premaxillary joint is paired.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001676") AnnotationAssertion(rdfs:label "mesethmoid-premaxillary joint") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (mesethmoid-nasal joint) AnnotationAssertion(Annotation( "TAO:pem") "Joint that articulates the mesethmoid and nasal. Mesethmoid-nasal joint is paired.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001677") AnnotationAssertion(rdfs:label "mesethmoid-nasal joint") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (mesethmoid-frontal joint) AnnotationAssertion(Annotation( "TAO:pem") "Joint that articulates the mesethmoid and frontal. Mesethmoid-frontal joint is paired.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001678") AnnotationAssertion(rdfs:label "mesethmoid-frontal joint") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (mesethmoid-vomer joint) AnnotationAssertion(Annotation( "TAO:pem") "Joint that articulates the mesethmoid and vomer. Mesethmoid-vomer joint is unpaired.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0005649") AnnotationAssertion(Annotation( "TAO:0001680") "mesethmoid-prevomer joint") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001680") AnnotationAssertion(rdfs:label "mesethmoid-vomer joint") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (cornu mesial process) AnnotationAssertion(Annotation( "TAO:pem") "Bony projection that is mesially-directed and off the anteromedial corner of each mesethmoid cornu.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001681") AnnotationAssertion(rdfs:label "cornu mesial process") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (transcapular ligament) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Ligament that is attached to supracleithrum and basioccipital.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion(Annotation( "TAO:0001683") "Baudelot's ligament") AnnotationAssertion(Annotation( "TAO:0001683") "transscapular ligament") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001683") AnnotationAssertion(rdfs:label "transcapular ligament") SubClassOf( ) # Class: (ossified transcapular ligament) AnnotationAssertion(Annotation( "TAO:pem") "Membrane bone that is fused to supracleithrum and is jointed to basioccipital and exoccipital.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion(Annotation( "TAO:0001684") "ossified Baudelot's ligament") AnnotationAssertion(Annotation( "TAO:0001684") "ossified transscapular ligament") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001684") AnnotationAssertion(rdfs:label "ossified transcapular ligament") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lateral ethmoid-ectopterygoid ligament) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Lateral ethmoid-ectopterygoid ligament is a ligament that connects the lateral ethmoid to the ectopterygoid.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0005503") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001685") AnnotationAssertion(rdfs:label "lateral ethmoid-ectopterygoid ligament") SubClassOf( ) # Class: (bony shelf above orbit) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "The bony shelf above orbit is an anatomical cluster formed by the dorsolateral portions of the lateral ethmoid, frontal and sphenotic bones that forms the dorsal margin of the orbit.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0005531") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001686") AnnotationAssertion(rdfs:label "bony shelf above orbit") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (interopercular-mandibular ligament) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Interopercular-mandibular ligament is a ligament that connects the interopercle to an element of the lower jaw, typically the retroarticular.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0005501") AnnotationAssertion(Annotation( "TAO:0001687") "interopercular-retroarticular ligament") AnnotationAssertion(Annotation( "TAO:0001687") "interoperculo-mandibular ligament") AnnotationAssertion(Annotation( "TAO:0001687") "interoperculomandibular ligament") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001687") AnnotationAssertion(rdfs:label "interopercular-mandibular ligament") SubClassOf( ) # Class: (median premaxilla) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Dermal bone that is located in the middle of the upper jaw, independently formed by fusion of tooth bases attached to soft tissue in the middle portion of the upper lip. The median premaxilla bears teeth in adults.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001692") AnnotationAssertion(rdfs:comment "Recorded in trichomycterid subfamilies Stegophilinae and Vandelliinae (Baskin, 1973). submitted by Mario de Pinna.") AnnotationAssertion(rdfs:label "median premaxilla") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (protractor operculi) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Muscle located in the lateral region of the cheek, linking the lateral surface of opercle with the posterolateral margin of the suspensorium (usually the preopercle).") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001693") AnnotationAssertion(rdfs:comment "Occurs in most members of the Trichomycteridae, except in basal Copionodontinae and Trichogeninae (de Pinna, 1992).") AnnotationAssertion(rdfs:label "protractor operculi") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (humerovertebral ligament) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Ligament that links the tip of the postcleithral process of the cleithrum with either the vertebral column (at the vertebral parapophysis or rib of the sixth vertebra) or with the soft tissue around the postcleithral region.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001694") AnnotationAssertion(rdfs:comment "Recorded in siluriform families Aspredinidae, Amblycipitidae, Akysidae, Sisoridae and Erethistidae (dePinna 1996). Submitted by Mario de Pinna.") AnnotationAssertion(rdfs:label "humerovertebral ligament") SubClassOf( ) # Class: (mediopharyngobranchial) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Pharyngeal arch cartilage, elongate and usually bifurcated posteriorly, located anteriorly on the upper branchial arches, attached to the anterior tips of the first infrapharyngobranchials. It supports rows of gill rakers on each side and is not homologous to other structures in the teleost gill-arch skeleton. One or two mediopharyngobranchials may be present.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001695") AnnotationAssertion(rdfs:comment "Recorded in several Clupeoidei (Nelson, 1967). Submitted by Mario de Pinna.") AnnotationAssertion(rdfs:label "mediopharyngobranchial") SubClassOf( ) # Class: (gongyloid cartilage) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Pharyngeal arch cartilage present on the dorsal surface of the middle portion of the upper branchial arches, dorsal to the point of contact between the second and third infrapharyngobranchials. It is round or cylyndrical in shape. Not homologous to the mediopharyngobranchial.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001696") AnnotationAssertion(rdfs:comment "Recorded in Pristigasteridae and Engraulidae, of Clupeiformes, apparently also present in Chanos, of Gonorynchiformes (Di Dario, 2002).") AnnotationAssertion(rdfs:label "gongyloid cartilage") SubClassOf( ) # Class: (transverse radial) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Endochondral bone, which may be ossified or not in adults, located immediately anteriorly to the pterygiophore series of the anal fin. The structure is usually cylindrical, and its plane of symmetry is transverse to that of pterygiophores and fin rays.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001697") AnnotationAssertion(rdfs:comment "Recorded in some Cetopsidae, Clariidae and Austroglanididae (Siluriformes) (De Pinna et al., 2007).") AnnotationAssertion(rdfs:label "transverse radial") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (basibranchial 5 bone) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Basibranchial bone that is ventral, median, and associated with branchial arch 5 (pharyngeal arch 7). Develops in posterior copula cartilage or basibranchial 5 cartilage.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001701") AnnotationAssertion(rdfs:label "basibranchial 5 bone") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (infraorbital 7) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Infraorbital that is the seventh bone of the infraorbital series.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001702") AnnotationAssertion(rdfs:label "infraorbital 7") SubClassOf( ) # Class: (infraorbital 8) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Infraorbital that is the eighth bone of the infraorbital series.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001703") AnnotationAssertion(rdfs:label "infraorbital 8") SubClassOf( ) # Class: (infraorbital 9) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Infraorbital that is the ninth bone of the infraorbital series.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001704") AnnotationAssertion(rdfs:label "infraorbital 9") SubClassOf( ) # Class: (infraorbital 10) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Infraorbital that is the tenth bone of the infraorbital series.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001705") AnnotationAssertion(rdfs:label "infraorbital 10") SubClassOf( ) # Class: (infraorbital 11) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Infraorbital that is the eleventh bone of the infraorbital series.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001706") AnnotationAssertion(rdfs:label "infraorbital 11") SubClassOf( ) # Class: (infraorbital 12) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Infraorbital that is the twelfth bone of the infraorbital series.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001707") AnnotationAssertion(rdfs:label "infraorbital 12") SubClassOf( ) # Class: (dermosphenotic) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Infraorbital that is the last bone of the infraorbital series, carrying the infraorbital canal, and sometimes also the supraorbital, temporal, and/or preopercular canals. The dermosphenotic is sometimes sutured or fused completely to the skull, e.g. to the autosphenotic.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "TAO:0001708") "infraorbital 5") AnnotationAssertion(Annotation( "TAO:0001708") "infraorbital 6") AnnotationAssertion(Annotation( "TAO:0001708") "infraorbital 7") AnnotationAssertion(Annotation( "TAO:0001708") "infraorbital 8") AnnotationAssertion( "UBERON:2001708") AnnotationAssertion(rdfs:label "dermosphenotic") SubClassOf( ) SubClassOf( ) # Class: (infraorbital series) AnnotationAssertion(Annotation( "TAO:GA_TG"^^xsd:string) "Anatomical cluster that is the series of dermal bones surrounding the orbit and associated with the infraorbital sensory canal.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001649") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "TAO:0001709") "circumorbital series") AnnotationAssertion( "UBERON:2001709") AnnotationAssertion(rdfs:comment "The infraorbital series may include the antorbital, a variable number of infraorbitals, and dermosphenotic (or posteriormost dorsal infraorbital). The infraorbital series may be formed by seven (primitively) or less bones in teleosts. Consequently, the so called dermosphenotic may correspond to the seventh, sixth or fifth bone, etc., depending on the taxon.") AnnotationAssertion(rdfs:label "infraorbital series") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (opercle-interopercle joint) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Joint that articulates the opercle and interopercle. Opercle-interopercle joint is paired.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0005478") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001710") AnnotationAssertion(rdfs:label "opercle-interopercle joint") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (frontal-pterotic joint) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Joint that articulates the frontal and pterotic. Frontal-pterotic joint is paired.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0005468") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001711") AnnotationAssertion(rdfs:label "frontal-pterotic joint") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (vertebral element 5) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Vertebra that is posteriorly adjacent to vertebra 4.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "5"^^xsd:nonNegativeInteger) AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0005347") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001732") AnnotationAssertion(rdfs:label "vertebral element 5") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) # Class: (mesethmoid ventral diverging lamella) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Bony projection that is the posterolaterally oriented projection on the ventral region of the mesethmoid. Mesethmoid ventral diverging lamellae are paired and posteriorly contact the lateral ethmoid bones.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001733") AnnotationAssertion(rdfs:comment "Reference: Weitzman 1962.") AnnotationAssertion(rdfs:label "mesethmoid ventral diverging lamella") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (posterior process of basipterygium) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Process that is the posteriorly oriented, paired projection of the basipterygium.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion(Annotation( "TAO:0001734") "ischiac process") AnnotationAssertion(Annotation( "TAO:0001734") "ischiatic process") AnnotationAssertion(Annotation( ) "posterior pelvic process") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001734") AnnotationAssertion(rdfs:label "posterior process of basipterygium") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (scapular foramen) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Foramen that is located in the scapula. The scapular foramen is paired and formed by a ring of bone.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0005431") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001735") AnnotationAssertion(rdfs:comment "Weitzman 1962.") AnnotationAssertion(rdfs:label "scapular foramen") SubClassOf( ) # Class: (anterior cranial fontanel) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Fontanel that is located between the contralateral frontals and anterior to the epiphyseal bar.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion(Annotation( "TAO:0001739") "frontal fontanel") AnnotationAssertion(Annotation( "TAO:0001739") "frontal fontanelle") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "TAO:0001739") "anterior fontanel") AnnotationAssertion( "UBERON:2001739") AnnotationAssertion(rdfs:label "anterior cranial fontanel") SubClassOf( ) # Class: (posterior cranial fontanel) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Fontanel that is located posterior to the epiphyseal bar, and typically located between the contralateral frontals and parietals (if present) and bordered posteriorly by the supraoccipital.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion(Annotation( "TAO:0001740") "parietal fontanel") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "TAO:0001740") "posterior fontanel") AnnotationAssertion(Annotation( "TAO:0001740") "posterior fontanelle") AnnotationAssertion( "UBERON:2001740") AnnotationAssertion(rdfs:label "posterior cranial fontanel") SubClassOf( ) # Class: (trigeminofacial foramen) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Foramen through which branches of cranial nerves V (trigeminal) and VII (facial) exit.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion(Annotation( "TAO:0001741") "trigemino-facialis foramen") AnnotationAssertion(Annotation( "TAO:0001741") "trigeminofacial nerve foramen") AnnotationAssertion(Annotation( "TAO:0001741") "trigeminofacialis foramen") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001741") AnnotationAssertion(rdfs:comment "i]In some vertebrates there are separate trigeminal foramen and facial foramen.") AnnotationAssertion(rdfs:label "trigeminofacial foramen") SubClassOf( ) # Class: (auditory foramen) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Foramen through which cranial nerve VIII (auditory) exits.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0005419") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001742") AnnotationAssertion(rdfs:comment "Reference: Weitzman 1962.") AnnotationAssertion(rdfs:label "auditory foramen") SubClassOf( ) # Class: (replacement tooth trench) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Anatomical space within a bone in which teeth develop.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion(Annotation( "TAO:0001744") "replacement tooth crypt") AnnotationAssertion(Annotation( "TAO:0001744") Annotation( ) "replacement tooth crypts") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001744") AnnotationAssertion(rdfs:label "replacement tooth trench") SubClassOf( ) # Class: (premaxilla replacement tooth trench) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Replacement tooth trench that is located in the premaxilla.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001745") AnnotationAssertion(rdfs:label "premaxilla replacement tooth trench") SubClassOf( ) # Class: (dentary replacement tooth trench) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Replacement tooth trench that is located in the dentary.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001746") AnnotationAssertion(rdfs:label "dentary replacement tooth trench") SubClassOf( ) # Class: (lateral mesethmoid wing) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Bony projection located on the anteroventral region of the mesethmoid which articulates with the premaxilla.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion(Annotation( "TAO:0001747") "mesethmoid lateral wing") AnnotationAssertion(Annotation( "TAO:0001747") "premaxillary articular process") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001747") AnnotationAssertion(rdfs:comment "Synonyms: mesethmoid lateral wing (Zanata and Vari 2005) lateral ethmoid wing (Weitzman 1962) premaxillary articular process (Fink and Fink 1996).") AnnotationAssertion(rdfs:label "lateral mesethmoid wing") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (superficial ophthalmic nerve foramen) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Foramen through which the superficial ophthalmic nerve passes.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0005432") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001748") AnnotationAssertion(rdfs:label "superficial ophthalmic nerve foramen") SubClassOf( ) # Class: (dentary-anguloarticular joint) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Joint that articulates the dentary and anguloarticular. Dentary-anguloarticular joint is paired.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0005464") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001749") AnnotationAssertion(rdfs:label "dentary-anguloarticular joint") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (rib of vertebra 6) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Rib that articulates with the parapophysis of the sixth centrum.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0005543") AnnotationAssertion(Annotation( "TAO:0001750") "sixth pleural rib") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001750") AnnotationAssertion(rdfs:label "rib of vertebra 6") SubClassOf( ) # Class: (rib of vertebra 5) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Rib that articulates with the parapophysis of the fifth centrum.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0005542") AnnotationAssertion(Annotation( "TAO:0001751") "fifth pleural rib") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001751") AnnotationAssertion(rdfs:label "rib of vertebra 5") SubClassOf( ) # Class: (pre-narial cartilage) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "The pre-narial cartilage is a cartilage that is located anterior to the anterior naris.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001752") AnnotationAssertion(rdfs:comment "Chen 1994.") AnnotationAssertion(rdfs:label "pre-narial cartilage") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (posttemporal fossa) AnnotationAssertion(Annotation( "ZFIN:ZDB-PUB-961014-192") Annotation(rdfs:comment "http://dx.doi.org/10.1590/S1679-62252010000300001") "Fossa where the exoccipital forms the medial portion and the epioccipital forms the lateral margin. The posttemporal fossa in most species has two openings separated by the epioccipital bridge.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0005628") AnnotationAssertion(Annotation( "TAO:0001753") "temporal groove") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "TAO:0001753") "temporal fossa") AnnotationAssertion( "UBERON:2001753") AnnotationAssertion(rdfs:comment "Chen 1994 gives these two synonyms: 'temporal fossa', Gauba 1967; and 'temporal groove', Mahajan 1966.") AnnotationAssertion(rdfs:label "posttemporal fossa") SubClassOf( ) # Class: (retractor tentaculi) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Bilaterally paired dorsal hyoid arch muscle that retracts the maxillary barbel.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001768") AnnotationAssertion(rdfs:label "retractor tentaculi") SubClassOf( ) # Class: (supraoccipital crest) AnnotationAssertion(Annotation( "TAO:GA_TG"^^xsd:string) "Process that is part of the supraoccipital. It is a posteriorly directed and unpaired median projection off the posterior margin of the supraoccipital bone.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion(Annotation( "TAO:0001783") "supraoccipital process") AnnotationAssertion(Annotation( "TAO:0001783") "supraoccipital spine") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001783") AnnotationAssertion(rdfs:comment "The supraoccipital crest may be small and restricted to the dorsal part of the supraoccipital, or may be large and long and extending ventrally to the dorsal margin of the foramen magnum. The supraoccipital crest may be a large process extending above the skull roof in some teleostean subgroups.") AnnotationAssertion(rdfs:label "supraoccipital crest") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pharyngobranchial 3 bone uncinate process) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Bony projection that is part of the pharyngobranchial 3.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001792") AnnotationAssertion(rdfs:label "pharyngobranchial 3 bone uncinate process") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pharyngobranchial 4 bone uncinate process) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Bony projection that is part of the pharyngobranchial 4.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion(Annotation( "TAO:0001793") "infrapharyngobranchial 4 bone uncinate process") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001793") AnnotationAssertion(rdfs:label "pharyngobranchial 4 bone uncinate process") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (orbitosphenoid-prootic joint) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Joint that articulates orbitosphenoid and prootic bones. Orbitosphenoid-prootic joint is paired.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0005480") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001794") AnnotationAssertion(rdfs:label "orbitosphenoid-prootic joint") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (ceratohyal foramen) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Foramen in the anterior ceratohyal for passage of the hyoidean artery.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion(Annotation( "TAO:0001795") "bericiform foramen") AnnotationAssertion(Annotation( "TAO:0001795") "beryciform foramen") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001795") AnnotationAssertion(rdfs:label "ceratohyal foramen") SubClassOf( ) # Class: (epibranchial 2 bone uncinate process) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Epibranchial uncinate process that is part of epibranchial 2 bone.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001796") AnnotationAssertion(rdfs:label "epibranchial 2 bone uncinate process") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (epibranchial 1 bone uncinate process) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Epibranchial uncinate process that is part of epibranchial 1 bone.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001797") AnnotationAssertion(rdfs:label "epibranchial 1 bone uncinate process") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (epicentral bone) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Intermuscular bone that articulates with the vertebral centrum.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion(Annotation( "PSPUB:0000131") "diépipleural") AnnotationAssertion(Annotation( "PSPUB:0000165") Annotation( "PSPUB:0000166") "neoneural") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001798") AnnotationAssertion(rdfs:label "epicentral bone") SubClassOf( ) # Class: (recessus lateralis) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Intracranial space formed by confluence of supraorbital, infraorbital, preopercular and temporal sensory canals. See also Di Dario (2004).") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0005493") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001799") AnnotationAssertion(rdfs:label "recessus lateralis") SubClassOf( ) # Class: (cephalic rib) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Modified epicentral intermuscular bone that connects the back of the skull with the pectoral girdle.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001800") AnnotationAssertion(rdfs:label "cephalic rib") SubClassOf( ) # Class: (olfactory nerve foramen) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Foramen for the passage of the olfactory nerve or cranial nerve 1.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0005429") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001804") AnnotationAssertion(rdfs:label "olfactory nerve foramen") SubClassOf( ) # Class: (articular bone) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Endochondral bone that is located posterior to the dentary, medial to the angular and antero-dorsal to the retroarticular forming the lower jaw. The articular bears a dorso-posterior articular facet for the condyle of the quadrate. The articular is a paired bone.") AnnotationAssertion( "Endochondral ossification of the posterior articular part of Meckel's cartilage.[AAO]") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "AAO:0000028") AnnotationAssertion(Annotation( "TAO:0001805") "articular") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001805") AnnotationAssertion(rdfs:comment "The articular fuses with the angular bone in clupeocephalans forming the anguloarticular.") AnnotationAssertion(rdfs:label "articular bone") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (preepiotic fossa) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Fossa that is a concavity on the dorsolateral surface of the skull roof found at least partially on the epiotic (epioccipital).") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion(Annotation( "TAO:0001807") "preepioccipital fossa") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001807") AnnotationAssertion(rdfs:label "preepiotic fossa") SubClassOf( ) # Class: (facial foramen) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Foramen through which cranial nerve VII (facial) exits.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion(Annotation( "TAO:0001808") "anterior opening trigeminofacialis chamber") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001808") AnnotationAssertion(rdfs:comment "This is the anterior opening of the trigeminofacialis (or trigeminal-facialis) chamber.") AnnotationAssertion(rdfs:label "facial foramen") SubClassOf( ) # Class: (trigeminal foramen) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Foramen through which cranial nerve V (trigeminal) exits.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion(Annotation( "TAO:0001809") "posterior opening of trigeminofacialis chamber") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001809") AnnotationAssertion(rdfs:comment "This is the posterior opening of trigeminofacialis (or trigeminal-facialis) chamber.") AnnotationAssertion(rdfs:label "trigeminal foramen") SubClassOf( ) # Class: (nuchal plate) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Dermal bone that is a bony expansion in the integument anterior to or flanking the dorsal fin that is part of and at the distal end of a supraneural or dorsal fin proximal radial.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001815") AnnotationAssertion(rdfs:label "nuchal plate") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (anterior nuchal plate) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Nuchal plate that is unpaired and part of the supraneural and in contact, or not, with the supraoccipital crest anteriorly and middle nuchal plate posteriorly.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion(Annotation( "TAO:0001816") "first nuchal plate") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001816") AnnotationAssertion(rdfs:label "anterior nuchal plate") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (epibranchial 3 bone uncinate process) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Epibranchial uncinate process that is part of epibranchial 3 bone.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001822") AnnotationAssertion(rdfs:label "epibranchial 3 bone uncinate process") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (epibranchial 4 bone uncinate process) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Epibranchial uncinate process that is part of epibranchial 4 bone.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001823") AnnotationAssertion(rdfs:label "epibranchial 4 bone uncinate process") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (premaxillary-maxillary ligament) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Ligament that connects the premaxilla to the maxilla.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0005265") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001827") AnnotationAssertion(rdfs:label "premaxillary-maxillary ligament") SubClassOf( ) # Class: (primordial ligament) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Ligament that connects the maxilla with the lower jaw.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0005264") AnnotationAssertion(Annotation( "TAO:0001828") "articular-maxillary ligament") AnnotationAssertion(Annotation( "TAO:0001828") "ligamentum primordiale") AnnotationAssertion(Annotation( "TAO:0001828") "maxillo-mandibular ligament") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001828") AnnotationAssertion(rdfs:comment "Synonym articular-maxillary ligament (Alexander 1964).") AnnotationAssertion(rdfs:label "primordial ligament") SubClassOf( ) # Class: (pterosphenoid-orbitosphenoid joint) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Joint that articulates the pterosphenoid and orbitosphenoid. Pterosphenoid-orbitosphenoid joint is paired.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0005483") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001831") AnnotationAssertion(rdfs:label "pterosphenoid-orbitosphenoid joint") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (parasphenoid-basioccipital joint) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Joint that articulates the parasphenoid and basioccipital. Parasphenoid-basioccipital joint is unpaired.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0005560") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001832") AnnotationAssertion(rdfs:label "parasphenoid-basioccipital joint") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (premaxillary tooth row) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Tooth row that is on the premaxilla.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001833") AnnotationAssertion(rdfs:label "premaxillary tooth row") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (tip) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Anatomical point that is the apex of a projection or anything long and tapered; can be bony or cartilage.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion(Annotation( "TAO:0001840") Annotation( ) "tips") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001840") AnnotationAssertion(rdfs:label "tip") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (interhyal-epihyal joint) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Joint that articulates the interhyal and epihyal bones, or interhyal and ceratohyal cartilages. Interhyal-epihyal joint is paired.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0005473") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001841") AnnotationAssertion(rdfs:comment "Logical definition to be added after generic element classes added to group/bone cartilage") AnnotationAssertion(rdfs:label "interhyal-epihyal joint") SubClassOf( ) # Class: (epihyal-ceratohyal joint) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Joint that articulates the epihyal and ceratohyal bones. Epihyal-ceratohyal joint is paired.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0005497") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001842") AnnotationAssertion(rdfs:label "epihyal-ceratohyal joint") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (epihyal-branchiostegal ray joint) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Joint that articulates the epihyal and branchiostegal ray bones. Epihyal-branchiostegal ray joint is paired.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0005498") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001849") AnnotationAssertion(rdfs:label "epihyal-branchiostegal ray joint") SubClassOf( ) # Class: (ceratohyal-branchiostegal ray joint) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Joint that articulates the ceratohyal and branchiostegal ray bones. Ceratohyal-branchiostegal ray joint is paired.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0005465") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001850") AnnotationAssertion(rdfs:label "ceratohyal-branchiostegal ray joint") SubClassOf( ) # Class: (postcleithrum 1) AnnotationAssertion(Annotation( "TAO:GA_TG"^^xsd:string) Annotation( "TAO:wd"^^xsd:string) "Postcleithrum that anteriorly articulates with the supracleithrum and/or the cleithrum of the pectoral girdle; most dorsal element in a series of postcleithra.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001852") AnnotationAssertion(rdfs:label "postcleithrum 1") SubClassOf( ) # Class: (postcleithrum 2) AnnotationAssertion(Annotation( "TAO:GA_TG"^^xsd:string) Annotation( "TAO:wd"^^xsd:string) "Postcleithrum that articulates dorsally with postcleithrum 1, ventrally with postcleithrum 3, and anteriorly with cleithrum.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001853") AnnotationAssertion(rdfs:label "postcleithrum 2") SubClassOf( ) # Class: (postcleithrum 3) AnnotationAssertion(Annotation( "TAO:GA_TG"^^xsd:string) Annotation( "TAO:wd"^^xsd:string) "Postcleithrum that articulates dorsally with postcleithrum 2 and, sometimes, anteriorly with cleithrum.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001854") AnnotationAssertion(rdfs:label "postcleithrum 3") SubClassOf( ) # Class: (hyomandibular condyle for the opercle) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Process on the dorso-posterior margin of the hyomandibula cartilage or bone that articulates with a depression on the antero-dorsal margin of the opercle.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion(Annotation( "TAO:0001855") "opercular process of hyomandibular") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001855") AnnotationAssertion(rdfs:label "hyomandibular condyle for the opercle") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (gill ray) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Gill ray is a slender, usually rod-like cartilage within a gill filament and ligamentously tied to its associated pharyngeal arch bone or cartilage.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0005390") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001856") AnnotationAssertion(rdfs:label "gill ray") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (suprapharyngobranchial) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "A pharyngobranchial bone that articulates with the neurocranium dorsally and epibranchial 1 and pharyngobranchial 2 ventrally; lies dorsal to other elements of the dorsal portions of the branchial arches.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion(Annotation( "TAO:0001858") "branchial spiracle") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001858") AnnotationAssertion(rdfs:comment "Articulates with the exoccipital or prootic depending on taxon.") AnnotationAssertion(rdfs:label "suprapharyngobranchial") SubClassOf( ) # Class: (pharyngobranchial 1 tooth plate) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Pharyngeal tooth plate that lies ventral to pharyngobranchial 1 bone.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion(Annotation( "TAO:0001859") "pharyngobranchial 1 toothplate") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001859") AnnotationAssertion(rdfs:label "pharyngobranchial 1 tooth plate") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (epibranchial 4-upper pharyngeal toothplate joint) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Joint that articulates the epibranchial 4 cartilage or bone and upper pharyngeal toothplate. Epibranchial 4-upper pharyngeal toothplate joint is paired.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001860") AnnotationAssertion(rdfs:label "epibranchial 4-upper pharyngeal toothplate joint") SubClassOf( ) # Class: (epibranchial 3-pharyngobranchial 3 joint) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Joint that articulates the epibranchial 3 cartilage or bone and pharyngobranchial 3 cartilage or bone. Epibranchial 3-pharyngobranchial 3 joint is paired.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001861") AnnotationAssertion(rdfs:label "epibranchial 3-pharyngobranchial 3 joint") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (epibranchial 3-pharyngobranchial 4 joint) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Joint that articulates the epibranchial 3 cartilage or bone and pharyngobranchial 4 cartilage or bone. Epibranchial 3-pharyngobranchial 4 joint is paired.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001862") AnnotationAssertion(rdfs:label "epibranchial 3-pharyngobranchial 4 joint") SubClassOf( ) # Class: (inter-hypobranchial 3 joint) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Joint that articulates the left and right hypobranchial 3 cartilages or bones. Inter-hypobranchial 3 joint is unpaired.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0005474") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001863") AnnotationAssertion(rdfs:label "inter-hypobranchial 3 joint") SubClassOf( ) # Class: (basibranchial 1 cartilage) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Pharyngeal arch cartilage that is ventral, median, and associated with branchial arch 1 (pharyngeal arch 3).") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001864") AnnotationAssertion(rdfs:label "basibranchial 1 cartilage") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (basibranchial 4 cartilage) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Pharyngeal arch cartilage that is ventral, median, and associated with branchial arch 4 (pharyngeal arch 6).") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001865") AnnotationAssertion(rdfs:label "basibranchial 4 cartilage") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (basibranchial 5 cartilage) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Pharyngeal arch cartilage that is ventral, median, and associated with branchial arch 5 (pharyngeal arch 7).") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001866") AnnotationAssertion(rdfs:label "basibranchial 5 cartilage") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (post-ceratobranchial cartilage) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Pharyngeal arch cartilage that is ventral, median, and at or posterior to the juncture of the bilaterally paired ceratobranchial 5 cartilage or bone.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion(Annotation( "TAO:0001867") "basibranchial 6") AnnotationAssertion(Annotation( "TAO:0001867") "copula 4") AnnotationAssertion(Annotation( "TAO:0001867") "pericardial cartilage") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001867") AnnotationAssertion(rdfs:label "post-ceratobranchial cartilage") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (supraneural 2 cartilage) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Postcranial axial cartilage located dorsal to vertebra 2.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001869") AnnotationAssertion(rdfs:label "supraneural 2 cartilage") SubClassOf( ) SubClassOf( ) # Class: (supraneural 3 cartilage) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Postcranial axial cartilage located dorsal to vertebrae 3 and 4.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001870") AnnotationAssertion(rdfs:label "supraneural 3 cartilage") SubClassOf( ) SubClassOf( ) # Class: (basibranchial 2 cartilage) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Pharyngeal arch cartilage that is ventral, median, and associated with branchial arch 2 (pharyngeal arch 4).") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001874") AnnotationAssertion(rdfs:label "basibranchial 2 cartilage") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (opercular series) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001875") AnnotationAssertion(rdfs:label "opercular series") SubClassOf( ) # Class: (basibranchial 3 cartilage) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Pharyngeal arch cartilage that is ventral, median, and associated with branchial arch 3 (pharyngeal arch 5).") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001876") AnnotationAssertion(rdfs:label "basibranchial 3 cartilage") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (neural arch 1) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Neural arch that is the anteriormost neural arch.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001877") AnnotationAssertion(rdfs:label "neural arch 1") SubClassOf( ) # Class: (rib of vertebra 2) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Rib that articulates with the parapophysis of the second centrum.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0005539") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001878") AnnotationAssertion(rdfs:label "rib of vertebra 2") SubClassOf( ) # Class: (rib of vertebra 1) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Rib that articulates with the parapophysis of the first centrum.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0005538") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001879") AnnotationAssertion(rdfs:label "rib of vertebra 1") SubClassOf( ) # Class: (rib of vertebra 3) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Rib that articulates with the parapophysis of the third centrum.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0005540") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001880") AnnotationAssertion(rdfs:label "rib of vertebra 3") SubClassOf( ) # Class: (rib of vertebra 4) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Rib that articulates with the parapophysis of the fourth centrum.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0005541") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001881") AnnotationAssertion(rdfs:label "rib of vertebra 4") SubClassOf( ) # Class: (parapophysis + rib of vertebra 3) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001882") AnnotationAssertion(rdfs:label "parapophysis + rib of vertebra 3") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (parapophysis + rib of vertebra 3 + rib of vertebra 4) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001883") AnnotationAssertion(rdfs:label "parapophysis + rib of vertebra 3 + rib of vertebra 4") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (accessory neural arch) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Neural arch that is located posterior to the neurocranium and anterior to neural arch 1. The accessory neural arch is not associated with a vertebral centrum.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001884") AnnotationAssertion(rdfs:comment "Definition from de Pinna and Grande (2003).") AnnotationAssertion(rdfs:label "accessory neural arch") SubClassOf( ) # Class: (neural spine 1) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Neural spine that is associated with the first vertebra.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001885") AnnotationAssertion(rdfs:label "neural spine 1") SubClassOf( ) # Class: (neural spine 2) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Neural spine that is associated with the second vertebra.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001886") AnnotationAssertion(rdfs:label "neural spine 2") SubClassOf( ) # Class: (neural spine 3) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Neural spine that is associated with the third vertebra.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001887") AnnotationAssertion(rdfs:label "neural spine 3") SubClassOf( ) # Class: (supraneural 1 bone) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Supraneural bone located dorsal to vertebra 1.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001888") AnnotationAssertion(rdfs:label "supraneural 1 bone") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (supraneural 1 cartilage) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Postcranial axial cartilage located dorsal to vertebra 1.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001889") AnnotationAssertion(rdfs:label "supraneural 1 cartilage") SubClassOf( ) SubClassOf( ) # Class: (interhyal element) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Skeletal element that is bilaterally paired and articulates dorsally with the hyosymplectic cartilage or the articulation of the hyomandibula and symplectic.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "stylohyal element") AnnotationAssertion( "uberon") AnnotationAssertion( "stylohyal") AnnotationAssertion( "UBERON:2001892") AnnotationAssertion(rdfs:label "interhyal element") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (hypobranchial element) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Skeletal element that is bilaterally paired and articulates medially with a median skeletal element and laterally with a ceratobranchial element.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001893") AnnotationAssertion(rdfs:label "hypobranchial element") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (hypobranchial 1 element) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Skeletal element that is ventral, bilaterally paired and articulates with a median skeletal element medially and with a ceratobranchial 1 element laterally.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001894") AnnotationAssertion(rdfs:label "hypobranchial 1 element") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (hypobranchial 2 element) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Skeletal element that is ventral, bilaterally paired and articulates with a median skeletal element medially and with a ceratobranchial 2 element laterally.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001895") AnnotationAssertion(rdfs:label "hypobranchial 2 element") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (hypobranchial 3 element) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Skeletal element that is ventral, bilaterally paired and articulates with a median skeletal element medially and with a ceratobranchial 3 element laterally.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001896") AnnotationAssertion(rdfs:label "hypobranchial 3 element") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (hypobranchial 4 element) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Skeletal element that is ventral, bilaterally paired and articulates with a median skeletal element medially and with a ceratobranchial 4 element laterally.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001897") AnnotationAssertion(rdfs:label "hypobranchial 4 element") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (ceratobranchial element) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Skeletal element that is bilaterally paired and forms part of the ventral branchial arches.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001898") AnnotationAssertion(rdfs:label "ceratobranchial element") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (ceratobranchial 1 element) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001899") AnnotationAssertion(rdfs:label "ceratobranchial 1 element") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (ceratobranchial 2 element) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001900") AnnotationAssertion(rdfs:label "ceratobranchial 2 element") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (ceratobranchial 3 element) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001901") AnnotationAssertion(rdfs:label "ceratobranchial 3 element") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (ceratobranchial 4 element) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001902") AnnotationAssertion(rdfs:label "ceratobranchial 4 element") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (ceratobranchial 5 element) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001903") AnnotationAssertion(rdfs:label "ceratobranchial 5 element") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (epibranchial element) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Skeletal element that is bilaterally paired and articulates laterally with ceratobranchial element.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion(Annotation( "TAO:0001904") Annotation( ) "epibranchial elements") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001904") AnnotationAssertion(rdfs:label "epibranchial element") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (epibranchial 1 element) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001905") AnnotationAssertion(rdfs:label "epibranchial 1 element") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (epibranchial 2 element) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001906") AnnotationAssertion(rdfs:label "epibranchial 2 element") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (epibranchial 3 element) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001907") AnnotationAssertion(rdfs:label "epibranchial 3 element") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (epibranchial 4 element) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001908") AnnotationAssertion(rdfs:label "epibranchial 4 element") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pharyngobranchial element) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Skeletal element of the branchial arches located medial to the epibranchials.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "infrapharyngobranchial element") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001909") AnnotationAssertion(rdfs:label "pharyngobranchial element") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pharyngobranchial 1 element) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Most anterior pharyngobranchial element, located medial to the epibranchials.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "infrapharyngobranchial 1 element") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001910") AnnotationAssertion(rdfs:label "pharyngobranchial 1 element") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pharyngobranchial 2 element) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Pharyngobranchial element, located medial to the epibranchials and posteriorly adjacent to pharyngobranchial 1 element.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "infrapharyngobranchial 2 element") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001911") AnnotationAssertion(rdfs:label "pharyngobranchial 2 element") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pharyngobranchial 3 element) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Pharyngobranchial element, located medial to the epibranchials and posteriorly adjacent to pharyngobranchial 2 element.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "infrapharyngobranchial 3 element") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001912") AnnotationAssertion(rdfs:label "pharyngobranchial 3 element") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pharyngobranchial 4 element) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Most posterior pharyngobranchial element, located medial to the epibranchials.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "infrapharyngobranchial 4 element") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "TAO:0001913") "infrapharyngobranchial 4 element") AnnotationAssertion( "UBERON:2001913") AnnotationAssertion(rdfs:label "pharyngobranchial 4 element") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete basibranchial element) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Endochondral element that is ventral, median, and associated with a single pharyngeal arch in the pharyngeal arch 3-7 skeleton.") AnnotationAssertion( "UBERON:0004740") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001914") AnnotationAssertion(rdfs:label "obsolete basibranchial element") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (basibranchial 1 element) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Skeletal element that is median and associated with branchial arch 1.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001915") AnnotationAssertion(rdfs:label "basibranchial 1 element") SubClassOf( ) # Class: (basibranchial 2 element) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Skeletal element that is median and associated with branchial arch 2.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001916") AnnotationAssertion(rdfs:label "basibranchial 2 element") SubClassOf( ) # Class: (basibranchial 3 element) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Skeletal element that is median and associated with branchial arch 3.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001917") AnnotationAssertion(rdfs:label "basibranchial 3 element") SubClassOf( ) # Class: (basibranchial 4 element) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Skeletal element that is median and associated with branchial arch 4.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001918") AnnotationAssertion(rdfs:label "basibranchial 4 element") SubClassOf( ) # Class: (basibranchial 5 element) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Skeletal element that is median and associated with branchial arch 5.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001919") AnnotationAssertion(rdfs:label "basibranchial 5 element") SubClassOf( ) # Class: (pseudotympanum) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Anatomical structure that is formed as a hiatus in the muscles covering the anterior chamber of the swim bladder in the area of ribs 5 and 6.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion(Annotation( "TAO:0001920") "humeral hiatus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001920") AnnotationAssertion(rdfs:label "pseudotympanum") SubClassOf( ) # Class: (inter-frontal joint) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Joint between the left and right frontal bone.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0005472") AnnotationAssertion(Annotation( "ZFIN:ZDB-PUB-060323-12") "interfrontal suture") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "ZFIN:ZDB-PUB-060323-12") "metopic suture") AnnotationAssertion( "UBERON:2001922") AnnotationAssertion(rdfs:label "inter-frontal joint") SubClassOf( ) # Class: (aortic canal) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Canal that houses the dorsal aorta.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001923") AnnotationAssertion(rdfs:label "aortic canal") SubClassOf( ) # Class: (occipital artery foramen) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Foramina that allow passage of occipital arteries.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001924") AnnotationAssertion(rdfs:label "occipital artery foramen") SubClassOf( ) # Class: (spiracular canal) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Foramen for passage of nerve supplying otic lateral line.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001925") AnnotationAssertion(rdfs:label "spiracular canal") SubClassOf( ) # Class: (posterior myodome) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Fossa or chamber on posterior portion of orbital region of neurocranium that serves as attachment site for posterior extrinsic eye muscles.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001926") AnnotationAssertion(rdfs:label "posterior myodome") SubClassOf( ) # Class: (anterior myodome) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Fossa or chamber on anterior portion of orbital region of neurocranium that serves as attachment site for anterior extrinsic eye musculature.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0005406") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001927") AnnotationAssertion(rdfs:label "anterior myodome") SubClassOf( ) # Class: (articular fossa of opercle) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Fossa of opercle that articulates with hyomandibular condyle for opercle.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0005442") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001928") AnnotationAssertion(rdfs:label "articular fossa of opercle") SubClassOf( ) # Class: (epioccipital posterior process) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Process of the epioccipital that extends posteriorly, is laminar in form and is usually attached to Weberian apparatus.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001929") AnnotationAssertion(rdfs:label "epioccipital posterior process") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (accessory vomerine tooth plate) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Dermal bone that is located lateral to vomer off midline of palate. Accessory vomerine tooth plate bears teeth and may be present as one or more pairs.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001930") AnnotationAssertion(rdfs:comment "Accessory vomerine tooth plate is not synonymous with dermopalatine tooth plate, palatine tooth plate, or pterygoid tooth plate.") AnnotationAssertion(rdfs:label "accessory vomerine tooth plate") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (rostral plate) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Dermal bone that is located on midline of snout in skin above mesethmoid and lateral ethmoid bones. Rostral plate bears type 1 odontodes and is unpaired.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001934") AnnotationAssertion(rdfs:label "rostral plate") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (oral disk) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Lip that is expanded to form a broad, rounded cup around the mouth.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001935") AnnotationAssertion(rdfs:label "oral disk") SubClassOf( ) # Class: (posterior nasal barbel) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Barbel that is attached to the anterior rim of the posterior nostril. Posterior nasal barbel is paired.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001936") AnnotationAssertion(rdfs:label "posterior nasal barbel") SubClassOf( ) # Class: (anterior nasal barbel) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Barbel that is associated with the anterior nostril. Anterior nasal barbel is paired.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0005407") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001937") AnnotationAssertion(rdfs:label "anterior nasal barbel") SubClassOf( ) # Class: (maxillary barbel) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Barbel that is attached to the distal end of the maxilla and that originates on the side of the mouth. Maxillary barbel is paired.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0005408") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001938") AnnotationAssertion(rdfs:label "maxillary barbel") SubClassOf( ) # Class: (inter-basipterygium joint) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Joint that articulates the left and right basipterygium cartilage or bone. Inter-basipterygium joint is unpaired.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0005471") AnnotationAssertion(Annotation( "TAO:0001939") "pelvic girdle symphysis") AnnotationAssertion(Annotation( "TAO:0001939") "pelvic symphysis") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001939") AnnotationAssertion(rdfs:label "inter-basipterygium joint") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (vertebra 4-vertebra 5 joint) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Joint between the centra, and sometimes the neural arches or parapophyses of vertebra 4 and vertebra 5.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0005504") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001940") AnnotationAssertion(rdfs:label "vertebra 4-vertebra 5 joint") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (metapterygoid-autopalatine ligament) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Ligament that connects the metapterygoid to the autopalatine.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001943") AnnotationAssertion(rdfs:label "metapterygoid-autopalatine ligament") SubClassOf( ) # Class: (lateral ethmoid-autopalatine ligament) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Lateral ethmoid-autopalatine ligament is a ligament that connects the lateral ethmoid to the autopalatine.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0005502") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001944") AnnotationAssertion(rdfs:label "lateral ethmoid-autopalatine ligament") SubClassOf( ) # Class: (mesethmoid-premaxillary ligament) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Mesethmoid-premaxillary ligament is a ligament that connects the mesethmoid to the premaxilla.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001945") AnnotationAssertion(rdfs:label "mesethmoid-premaxillary ligament") SubClassOf( ) # Class: (mesethmoid-maxillary ligament) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Mesethmoid-maxillary ligament is a ligament that connects the mesethmoid to the maxilla.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001946") AnnotationAssertion(rdfs:label "mesethmoid-maxillary ligament") SubClassOf( ) # Class: (hyomandibular-otic region joint) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Joint that articulates the hyomandibular cartilage or bone and otic region cartilage or sphenotic bone, and often pterotic bone and prootic bone. Hyomandibular-otic region joint is paired.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0005544") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001947") AnnotationAssertion(rdfs:label "hyomandibular-otic region joint") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (inter-premaxillary joint) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Joint that articulates the left and right premaxillary bones. Inter-premaxillary joint is unpaired.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0005475") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001950") AnnotationAssertion(rdfs:label "inter-premaxillary joint") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (skin flap) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Surface structure that is a portion of skin that projects or hangs from the body.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0005495") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001951") AnnotationAssertion(rdfs:label "skin flap") SubClassOf( ) # Class: (dentary tooth row) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Tooth row that is on the dentary.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001952") AnnotationAssertion(rdfs:label "dentary tooth row") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete cranial muscle) AnnotationAssertion( "UBERON:0002376") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001953") AnnotationAssertion(rdfs:label "obsolete cranial muscle") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete pigmentation) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "TAO:0001955") "body pigmentation") AnnotationAssertion( "UBERON:2001955") AnnotationAssertion(rdfs:label "obsolete pigmentation") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (epibranchial 1 bone proximal cartilage) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Pharyngeal cartilage that is part of and at the proximal end of epibranchial 1 bone, and that usually articulates with a pharyngobranchial element. Epibranchial 1 bone proximal cartilage is paired.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion(Annotation( "TAO:0001956") "epibranchial 1 anterior cartilage") AnnotationAssertion(Annotation( "TAO:0001956") "epibranchial 1 mesial cartilage") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001956") AnnotationAssertion(rdfs:label "epibranchial 1 bone proximal cartilage") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (epibranchial 2 bone proximal cartilage) AnnotationAssertion(Annotation( "TAO:w") "Pharyngeal cartilage that is part of and at the proximal end of epibranchial 2 bone, and that usually articulates with a pharyngobranchial element. Epibranchial 2 bone proximal cartilage is paired.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion(Annotation( "TAO:0001957") "epibranchial 2 anterior cartilage") AnnotationAssertion(Annotation( "TAO:0001957") "epibranchial 2 mesial cartilage") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001957") AnnotationAssertion(rdfs:label "epibranchial 2 bone proximal cartilage") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (ceratobranchial 3 bone distal cartilage) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Pharynbeal cartilage that is part of and at the distal end of ceratobranchial 3 bone, and that usually articulates with epibranchial 3 element. Ceratobranchial 3 bone distal cartilage is paired.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion(Annotation( "TAO:0001958") "ceratobranchial 3 bone lateral cartilage") AnnotationAssertion(Annotation( "TAO:0001958") "ceratobranchial 3 bone posterior cartilage") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001958") AnnotationAssertion(rdfs:label "ceratobranchial 3 bone distal cartilage") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (ceratobranchial 4 bone proximal cartilage) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Pharyngeal cartilage that is part of and at the proximal end of ceratobranchial 4 bone, and that usually articulates with basibranchial 4 element. Ceratobranchial 4 proximal cartilage is paired.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion(Annotation( "TAO:0001959") "ceratobranchial 4 bone anterior cartilage") AnnotationAssertion(Annotation( "TAO:0001959") "ceratobranchial 4 bone mesial cartilage") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001959") AnnotationAssertion(rdfs:label "ceratobranchial 4 bone proximal cartilage") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (ceratobranchial 4 bone distal cartilage) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Pharyngeal cartilage that is part of and at the distal end of ceratobranchial 4 bone, and that usually articulates with epibranchial 4 element. Ceratobranchial 4 distal cartilage is paired.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion(Annotation( "TAO:0001960") "ceratobranchial 4 bone lateral cartilage") AnnotationAssertion(Annotation( "TAO:0001960") "ceratobranchial 4 bone posterior cartilage") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001960") AnnotationAssertion(rdfs:label "ceratobranchial 4 bone distal cartilage") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (ceratobranchial 5 bone distal cartilage) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Pharyngeal cartilage that is part of and at the distal end of ceratobranchial 5 bone. Ceratobranchial 5 bone distal cartilage is paired.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion(Annotation( "TAO:0001961") "ceratobranchial 5 bone lateral cartilage") AnnotationAssertion(Annotation( "TAO:0001961") "ceratobranchial 5 bone posterior cartilage") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001961") AnnotationAssertion(rdfs:label "ceratobranchial 5 bone distal cartilage") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (hypobranchial 1 bone distal cartilage) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Pharyngeal cartilage that is part of and at the distal end of hypobranchial 1 bone, and that usually articulates with ceratobranchial 1 element. Hypobranchial 1 bone distal cartilage is paired.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion(Annotation( "TAO:0001962") "hypobranchial 1 bone lateral cartilage") AnnotationAssertion(Annotation( "TAO:0001962") "hypobranchial 1 bone posterior cartilage") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001962") AnnotationAssertion(rdfs:label "hypobranchial 1 bone distal cartilage") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (hypobranchial 2 bone distal cartilage) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Pharyngeal cartilage that is part of and at the distal end of hypobranchial 2 bone, and that usually articulates with ceratobranchial 2 element. Hypobranchial 2 bone distal cartilage is paired.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion(Annotation( "TAO:0001963") "hypobranchial 2 bone lateral cartilage") AnnotationAssertion(Annotation( "TAO:0001963") "hypobranchial 2 bone posterior cartilage") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001963") AnnotationAssertion(rdfs:label "hypobranchial 2 bone distal cartilage") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (epibranchial 3 bone uncinate process cartilage) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Pharyngeal cartilage that is part of and at the distal end of epibranchial bone 3 uncinate process. epibranchial bone 3 uncinate process cartilage is paired.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001964") AnnotationAssertion(rdfs:label "epibranchial 3 bone uncinate process cartilage") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (epibranchial 4 bone uncinate process cartilage) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Pharyngeal cartilage that is part of and at the distal end of epibranchial bone 4 uncinate process. Epibranchial bone 4 uncinate process cartilage is paired.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001965") AnnotationAssertion(rdfs:label "epibranchial 4 bone uncinate process cartilage") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (epibranchial 5 element) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001966") AnnotationAssertion(rdfs:label "epibranchial 5 element") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete orbit) AnnotationAssertion( "ZFA:0005558") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001967") AnnotationAssertion(rdfs:comment "Obsoleted as we redundant with other classes. See https://github.com/obophenotype/uberon/issues/462") AnnotationAssertion(rdfs:label "obsolete orbit") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (outer mental barbel) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Mental barbel that originates on the chin, in a posterolateral position relative to the inner mental barbel.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001968") AnnotationAssertion(rdfs:label "outer mental barbel") SubClassOf( ) # Class: (inner mental barbel) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Mental barbel that originates on the chin, in an anteromedial position relative to the outer mental barbel. The inner mental barbel is nearer to the mandibular symphysis than is the outer mental barbel.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0005508") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001969") AnnotationAssertion(rdfs:label "inner mental barbel") SubClassOf( ) # Class: (parapophysis 4) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Parapophysis that is the lateral projection from the fourth centrum. Parapophysis 4 is bilaterally paired.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001971") AnnotationAssertion(rdfs:label "parapophysis 4") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (intercostal ligament) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Ligament that connects one rib to another.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0005637") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001972") AnnotationAssertion(rdfs:label "intercostal ligament") SubClassOf( ) # Class: (subtemporal fossa) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0005454") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001974") AnnotationAssertion(rdfs:label "subtemporal fossa") SubClassOf( ) # Class: (suprabranchial artery) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001975") AnnotationAssertion(rdfs:label "suprabranchial artery") SubClassOf( ) # Class: (interorbital septum) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Anatomical cluster composed of one or more bones and tissue that separates the orbits.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001976") AnnotationAssertion(rdfs:label "interorbital septum") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pad) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Surface structure that is a portion of the integument thickened relative to surrounding area.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion(Annotation( "TAO:0001977") Annotation( ) "pads") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001977") AnnotationAssertion(rdfs:label "pad") SubClassOf( ) # Class: (maxillary tooth row) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Tooth row that is on the maxilla.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001978") AnnotationAssertion(rdfs:label "maxillary tooth row") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (vertebral element 6) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Vertebra that is posteriorly adjacent to vertebra 5.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "6"^^xsd:nonNegativeInteger) AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0005348") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001980") AnnotationAssertion(rdfs:label "vertebral element 6") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) # Class: (vertebral element 7) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Vertebra that is posteriorly adjacent to vertebra 6.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "7"^^xsd:nonNegativeInteger) AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0005349") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001981") AnnotationAssertion(rdfs:label "vertebral element 7") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) # Class: (vertebral element 8) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Vertebra that is posteriorly adjacent to vertebra 7.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "8"^^xsd:nonNegativeInteger) AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0005350") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001982") AnnotationAssertion(rdfs:label "vertebral element 8") SubClassOf( ) # Class: (centrum 1) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Centrum that is part of vertebra 1.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001983") AnnotationAssertion(rdfs:label "centrum 1") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (centrum 2) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Centrum that is part of vertebra 2.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001984") AnnotationAssertion(rdfs:label "centrum 2") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (centrum 3) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Centrum that is part of vertebra 3.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001985") AnnotationAssertion(rdfs:label "centrum 3") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (centrum 4) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Centrum that is part of vertebra 4.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001986") AnnotationAssertion(rdfs:label "centrum 4") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (centrum 5) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Centrum that is part of vertebra 5.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001987") AnnotationAssertion(rdfs:label "centrum 5") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (centrum 6) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Centrum that is part of vertebra 6.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001988") AnnotationAssertion(rdfs:label "centrum 6") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (mandibular-hyoid median cartilage) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Pharyngeal arch cartilage that is a spherical mass of cartilage located between the mandibular symphysis and ventral hyoid arch. Mandibular-hyoid median cartilage is unpaired.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion(Annotation( "TAO:0001989") "hyomandibular cartilage sensu Schaefer (1990)") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001989") AnnotationAssertion(rdfs:comment "Schaefer, S. 1990. (Anatomy and relationships of the scoloplacid catfishes. Proc. Acad. Nat. Sci. Phil. 142: 167-210) described this structure in certain catfishes and applied the name hyomandibular cartilage. To avoid possible confusion of this structure with the hyomandibular cartilage (or bone) of the suspensorium, the term mandibular-hyoid median cartilage is used here.") AnnotationAssertion(rdfs:label "mandibular-hyoid median cartilage") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (epibranchial arborescent organ) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Anatomical cluster that is an outgrowth of the soft tissue around the dorsolateral corner of a branchial arch that is internally supported by a core of rigid cartilage-like tissue. Epibranchial arborescent organ is paired.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion(Annotation( "TAO:0001990") "suprabranchial organ") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001990") AnnotationAssertion(rdfs:comment "Greenwood, P. H. 1961 (A revision of the genus Dinotopterus Blgr. (pisces, Clariidae) with notes on the comparative anatomy of the suprabranchial organs in the Clariidae. Bull. British Mus (Nat. His.), Zool. 7(4): 217-241.) described this structure in certain catfishes and applied the term suprabranchial organ to it. To avoid possible confusion with distinctly different structures bearing the name suprabranchial organs in other teleosts, the term epibranchial arborescent organ is used here following the lead of de Pinna 1993.") AnnotationAssertion(rdfs:label "epibranchial arborescent organ") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lateral bone) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Membrane bone extending between a transverse process of the second proximal dorsal-fin radial and the pleural rib of the sixth vertebra. Lateral bone is paired.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001991") AnnotationAssertion(rdfs:label "lateral bone") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (papilla) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Surface structure that is a small, fleshy protuberance.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion(Annotation( "TAO:0001995") Annotation( ) "papillae") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "TAO:0001995") "dermal papilla") AnnotationAssertion( "UBERON:2001995") AnnotationAssertion(rdfs:label "papilla") SubClassOf( ) # Class: (maxillary canal) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001996") AnnotationAssertion(rdfs:label "maxillary canal") SubClassOf( ) # Class: (parietal-supraoccipital) AnnotationAssertion(Annotation( "TAO:GA_TG"^^xsd:string) "Compound dermal and endochondral bone that results from the fusion of the paired dermal parietal bones and the median endochondral supraoccipital. Forms the dorso-posterior element of the dermatocranium.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion(Annotation( "TAO:0001997") "supraoccipital") AnnotationAssertion(Annotation( "TAO:0001997") "parieto-supraoccipital") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2001997") AnnotationAssertion(rdfs:comment "A parietal-supraoccipital or parieto-supraoccipital bone is an element present in Siluriformes.") AnnotationAssertion(rdfs:label "parietal-supraoccipital") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (posttemporal-supracleithrum) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Dermal bone that results from the fusion of the dermal posttemporal and the dermal supracleithrum. Forms the upper skeletal element of the pectoral girdle between the cleithrum and neurocranium. Posttemporal-supracleithrum is paired.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion(Annotation( "TAO:0001998") "postemporo-supracleithrum") AnnotationAssertion(Annotation( "TAO:0001998") "posttemporo-supracleithrum") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "TAO:0001998") "posttemporal") AnnotationAssertion(Annotation( "TAO:0001998") "supracleithrum") AnnotationAssertion( "UBERON:2001998") AnnotationAssertion(rdfs:comment "A posttemporo-supracleithrum is a bone present in Siluriformes. There are different opinions if this is the result of an ontogenetic or a phylogenetic fusion or the loss or one or other bone.") AnnotationAssertion(rdfs:label "posttemporal-supracleithrum") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (canal plate) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Dermal bone that is ventral to the preopercle and bears a portion of the preopercular sensory canal.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2002005") AnnotationAssertion(rdfs:comment "The number of canal plates present can be variable.") AnnotationAssertion(rdfs:label "canal plate") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (axillary pore) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Pore that is located ventral to the posterior cleithral process and medial to the pectoral fin. Axillary pore is at the end of a duct from an integumentary gland.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2002006") AnnotationAssertion(rdfs:label "axillary pore") SubClassOf( ) # Class: (supraneural 4 bone) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Supraneural dorsal to neural spine 4.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2002007") AnnotationAssertion(rdfs:label "supraneural 4 bone") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (hyoideomandibular nerve) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Nerve that is a branch of cranial nerve VII that passes through or around the suspensorium to innervate muscles and sensory organs on or near pharyngeal arch 2.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0005397") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2002010") AnnotationAssertion(rdfs:label "hyoideomandibular nerve") SubClassOf( ) # Class: (lateral fontanel of frontal) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Fontanel within the frontal bone near the frontal-sphenotic joint. Lateral fontanel of frontal is paired.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0005537") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2002011") AnnotationAssertion(rdfs:comment "Original reference: de Pinna MCC, Vari RP. 1995. Monophyly and phylogenetic diagnosis of the family Cetopsidae, with synonymization of the Helogenidae (Teleostei: Siluriformes). Smithsonian Contributions to Zoology 571: 1-26.") AnnotationAssertion(rdfs:label "lateral fontanel of frontal") SubClassOf( ) # Class: (dentary foramen) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Foramen located on the dentary for passage of the mandibular nerve.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0005427") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2002012") AnnotationAssertion(rdfs:label "dentary foramen") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (ascending limb of ceratobranchial 5 bone) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Process that is the dorsally directed portion of ceratobranchial 5 bone.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2002013") AnnotationAssertion(rdfs:comment "An ascending limb of the ceratobranchial is found in Cypriniformes.") AnnotationAssertion(rdfs:label "ascending limb of ceratobranchial 5 bone") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (ascending limb of ceratobranchial 5 cartilage) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Process that is the dorsally directed portion of ceratobranchial 5 cartilage.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2002014") AnnotationAssertion(rdfs:comment "An ascending limb of the ceratobranchial is found in Cypriniformes.") AnnotationAssertion(rdfs:label "ascending limb of ceratobranchial 5 cartilage") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pharyngobranchial tooth plate) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Dermal bone of upper pharyngeal arches associated with pharyngobranchial bones or cartilages, usually bearing teeth.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion(Annotation( "TAO:0002015") "pharyngobranchial toothplate") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2002015") AnnotationAssertion(rdfs:label "pharyngobranchial tooth plate") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pharyngobranchial 4 tooth plate) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Pharyngeal tooth plate that lies ventral to pharyngobranchial 4.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion(Annotation( "TAO:0002016") "pharyngobranchial 4 toothplate") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2002016") AnnotationAssertion(rdfs:label "pharyngobranchial 4 tooth plate") SubClassOf( ) # Class: (anterior limb of ceratobranchial 5 bone) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Process that is the anterior and medially directed portion of ceratobranchial 5 bone part of ceratobranchial 5 bone.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2002017") AnnotationAssertion(rdfs:comment "This term applies to cypriniform fishes.") AnnotationAssertion(rdfs:label "anterior limb of ceratobranchial 5 bone") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (anterior limb of ceratobranchial 5 cartilage) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Process that is the anterior and medially directed portion of ceratobranchial 5 cartilage.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2002018") AnnotationAssertion(rdfs:comment "This term applies to cypriniform fishes.") AnnotationAssertion(rdfs:label "anterior limb of ceratobranchial 5 cartilage") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pterotic-posttemporal-supracleithrum) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Bone that is a fusion of the pterotic, posttemporal, and supracleithrum bones.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion(Annotation( "TAO:0002019") "pterotic-supracleithrum") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2002019") AnnotationAssertion(rdfs:label "pterotic-posttemporal-supracleithrum") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (hypomaxilla) AnnotationAssertion(Annotation( "TAO:ga_tg") "Dermal bone bearing teeth located between the distal end of the premaxilla and the middle of the maxilla. The hypomaxilla is a paired bone.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2002020") AnnotationAssertion(rdfs:comment "Hypomaxilla is a bone restricted to some clupeiforms. See Berry (1964) for a detailed account of the distribution of the hypomaxilla within clupeiforms and specifically in Herengula.") AnnotationAssertion(rdfs:label "hypomaxilla") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (ascending process of the parasphenoid) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Process that is the lateral projection of the parasphenoid arising and articulating with the more dorsal portions of the neurocranium, usually at the level of the prootic.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion(Annotation( "TAO:0002021") "ascending ramus of the parasphenoid") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2002021") AnnotationAssertion(rdfs:label "ascending process of the parasphenoid") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (dermethmoid) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Dermal bone of the dorsal surface of the olfactory region. Dermethmoid can be paired or median.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2002022") AnnotationAssertion(rdfs:label "dermethmoid") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (second preethmoid bone) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Endochondral bone found between the preethmoid and maxilla.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2002023") AnnotationAssertion(rdfs:label "second preethmoid bone") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (mental barbel) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Barbel that originates on the chin.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0005433") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2002024") AnnotationAssertion(rdfs:label "mental barbel") SubClassOf( ) # Class: (orbital foramen) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Foramen in the bone or cartilage comprising the anterior wall of the orbit, and through which passes at least the deep ophthalmic branch of cranial nerve V (trigeminal).") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0005430") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2002031") AnnotationAssertion(rdfs:label "orbital foramen") SubClassOf( ) # Class: (prootic-pterosphenoid joint) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Joint that articulates the prootic and pterosphenoid. prootic-pterosphenoid joint is paired.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0005482") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2002033") AnnotationAssertion(rdfs:label "prootic-pterosphenoid joint") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (prootic-exoccipital joint) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Joint that articulates the prootic and exoccipital. Prootic-exoccipital joint is paired.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0005481") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2002034") AnnotationAssertion(rdfs:label "prootic-exoccipital joint") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (basioccipital-exoccipital joint) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Joint that articulates the basioccipital and exoccipital. Basioccipital-exoccipital joint is paired.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0005423") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2002038") AnnotationAssertion(rdfs:label "basioccipital-exoccipital joint") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (dilatator fossa) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Fossa located on the neurocranium that is formed from portions of the sphenotic, frontal and pterotic bones.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2002039") AnnotationAssertion(rdfs:comment "Dilatator fossa is present in some characiform fishes.") AnnotationAssertion(rdfs:label "dilatator fossa") SubClassOf( ) # Class: (inter-coracoid joint) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Joint between the right and left coracoid bones of the pectoral girdle.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0005470") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2002040") AnnotationAssertion(rdfs:label "inter-coracoid joint") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (parapophysis 6) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Parapophysis that is the lateral projection from the sixth centrum.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2002041") AnnotationAssertion(rdfs:label "parapophysis 6") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (parapophysis 5) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Parapophysis that is the lateral projection from the fifth centrum.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2002042") AnnotationAssertion(rdfs:label "parapophysis 5") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (posterior limb of parapophysis 4) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Process that arises and projects posterolaterally from parapophysis 4. Posterior limb of parapophysis 4 is bilaterally paired.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion(Annotation( "TAO:0002043") "posterior branch of parapophysis 4") AnnotationAssertion(Annotation( "TAO:0002043") "posterior wing of parapophysis 4") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2002043") AnnotationAssertion(rdfs:label "posterior limb of parapophysis 4") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (anterior limb of parapophysis 4) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Process that arises and projects anterolaterally from parapophysis 4. Anterior limb of parapophysis 4 is bilaterally paired.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion(Annotation( "TAO:0002044") "Mullerian ramus") AnnotationAssertion(Annotation( "TAO:0002044") "Müllerian ramus") AnnotationAssertion(Annotation( "TAO:0002044") "anterior branch of parapophysis 4") AnnotationAssertion(Annotation( "TAO:0002044") "anterior wing of parapophysis 4") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2002044") AnnotationAssertion(rdfs:label "anterior limb of parapophysis 4") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete alarm substance cell) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Epithelial cell that produces a chemical that triggers antipredator behavior.") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2002049") AnnotationAssertion(rdfs:comment "replace with CL_0007021 once cl is released.") AnnotationAssertion(rdfs:label "obsolete alarm substance cell") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete Schreckstoff) AnnotationAssertion(Annotation( "PHENOSCAPE:wd") "Chemical substance that functions as an alarm signal.") AnnotationAssertion( "CHEBI:133299") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2002050") AnnotationAssertion(rdfs:label "obsolete Schreckstoff") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (prootic depression) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Shallow area that exists on the prootic.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0005510") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2002052") AnnotationAssertion(rdfs:label "prootic depression") SubClassOf( ) # Class: (bony plate) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Dermal bone that is located on or subjacent to the surface anywhere on the body and that is not part of the general complement of scales, dermal bone of the dermatocranium, postcranial axial skeleton or paired fin skeleton. Bony plate may exist singly, or as unpaired or paired clusters or series.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0005532") AnnotationAssertion(Annotation( "TAO:0002053") "armor") AnnotationAssertion(Annotation( "TAO:0002053") "armor plate") AnnotationAssertion(Annotation( "TAO:0002053") "osteoderms") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2002053") AnnotationAssertion(rdfs:label "bony plate") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (vertebra 5-vertebra 6 joint) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Joint between the centra, and sometimes the neural arches or parapophyses.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0005505") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2002054") AnnotationAssertion(rdfs:label "vertebra 5-vertebra 6 joint") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (vertebra 6 - vertebra 7 joint) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Joint between the centra, and sometimes the neural arches or parapophyses of vertebra 6 and vertebra 7.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0005506") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2002055") AnnotationAssertion(rdfs:label "vertebra 6 - vertebra 7 joint") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (Weberian complex centrum) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Centrum that is the fusion of centra 2-4.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2002058") AnnotationAssertion(rdfs:label "Weberian complex centrum") SubClassOf( ) # Class: (posttemporal-parietal joint) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2002059") AnnotationAssertion(rdfs:label "posttemporal-parietal joint") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (predorsal vertebra) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Vertebra that is positioned between the vertebra immediately anterior to the first dorsal-fin pterygiophore to the anteriormost vertebra.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2002061") AnnotationAssertion(rdfs:label "predorsal vertebra") SubClassOf( ) # Class: (nuchal plate series) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Anatomical cluster that consists of more than one type of nuchal plate in an individual.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2002063") AnnotationAssertion(rdfs:label "nuchal plate series") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (auditory fenestra) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Opening in the neurocranium to allow communication between the swimbladder and the inner ear.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0005418") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2002066") AnnotationAssertion(rdfs:label "auditory fenestra") SubClassOf( ) # Class: (distal cartilage of posterior process of basipterygium) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Process that is cartilaginous and arises from the distal margin or tip of posterior process of basipterygium and projects posteriorly.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2002069") AnnotationAssertion(rdfs:label "distal cartilage of posterior process of basipterygium") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (internal anterior process of basipterygium) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Process that is bony and arises from anteromedial corner of basipterygium and projects anteriorly or anteromedially.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion(Annotation( "TAO:0002070") "internal anterior arm of basipterygium") AnnotationAssertion(Annotation( "TAO:0002070") "internal arm of the basipterygium") AnnotationAssertion(Annotation( "TAO:0002070") "mesial anterior arm of basipterygium") AnnotationAssertion(Annotation( "TAO:0002070") "mesial anterior process of basipterygium") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2002070") AnnotationAssertion(rdfs:label "internal anterior process of basipterygium") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (distal cartilage of internal anterior process of basipterygium) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Process that is cartilaginous and arises from the distal tip of internal anterior process of basipterygium.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2002071") AnnotationAssertion(rdfs:label "distal cartilage of internal anterior process of basipterygium") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (middle anterior process of basipterygium) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Process that is bony and arises from anterior margin of basipterygium between internal anterior process of basipterygium and external anterior process of basipterygium. Middle anterior process of basipterygium projects anteriorly or anteromedially.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion(Annotation( "TAO:0002072") "middle anterior arm of basipterygium") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2002072") AnnotationAssertion(rdfs:label "middle anterior process of basipterygium") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (distal cartilage of middle anterior process of basipterygium) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Process that is cartilaginous and arises from the distal tip of middle anterior process of basipterygium.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2002073") AnnotationAssertion(rdfs:label "distal cartilage of middle anterior process of basipterygium") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (external anterior process of basipterygium) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Process that is bony and arises from anterolateral corner of basipterygium and projects anteriorly or anteromedially.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion(Annotation( "TAO:0002074") "external anterior arm of basipterygium") AnnotationAssertion(Annotation( "TAO:0002074") "external arm of basipterygium") AnnotationAssertion(Annotation( "TAO:0002074") "lateral anterior process of basipterygium") AnnotationAssertion(Annotation( ) "lateral pelvic process") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2002074") AnnotationAssertion(rdfs:label "external anterior process of basipterygium") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (distal cartilage of external anterior process of basipterygium) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Process that is cartilaginous and arises from the distal tip of external anterior process of basipterygium.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2002075") AnnotationAssertion(rdfs:label "distal cartilage of external anterior process of basipterygium") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lateral process of basipterygium) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Process that is bony and arises from lateral margin of basipterygium lateral to pelvic fin lepidotrichium 1 and projects laterally or anterolaterally.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion(Annotation( "TAO:0002076") "posterolateral process of basipterygium") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2002076") AnnotationAssertion(rdfs:label "lateral process of basipterygium") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (leptocephalous larva) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Larval stage in some teleosts before metomorphosis.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2002079") AnnotationAssertion(rdfs:label "leptocephalous larva") SubClassOf( ) # Class: (spina occipitalis) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Process that is a ventral projection from the supraoccipital that extends between the exoccipitals to the dorsal margin of the foramen magnum.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2002080") AnnotationAssertion(rdfs:label "spina occipitalis") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (interhaemal bone) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "A small bone articulating distally with the haemal arch or a short haemal spine.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2002088") AnnotationAssertion(rdfs:comment "Definition from Arratia 1999.") AnnotationAssertion(rdfs:label "interhaemal bone") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (gular plate) AnnotationAssertion(Annotation( "TAO:ga_tg") Annotation( "TAO:wd"^^xsd:string) "Dermal bone located on the ventral surface of the skull and positioned between the two rami of the lower jaw. Anteriorly the gular attaches to the symphysis of the lower jaw through fibrous connective tissue. The gular is an unpaired median bone.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion(Annotation( "TAO:0002089") "median gular") AnnotationAssertion( "median gular plate") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2002089") AnnotationAssertion(rdfs:comment "A gular plate is absent in most extant teleosts.") AnnotationAssertion(rdfs:label "gular plate") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pro-otic fossa) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0005492") AnnotationAssertion(Annotation( "TAO:0002090") "prootic fossa") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2002090") AnnotationAssertion(rdfs:label "pro-otic fossa") SubClassOf( ) # Class: (rostral cartilage) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Median chondrified cartilage bound to premaxillary ascending process by a rostro-premaxilla ligament.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2002092") AnnotationAssertion(rdfs:label "rostral cartilage") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (ventromedial opening of posttemporal fossa) AnnotationAssertion(Annotation( "http://dx.doi.org/10.1590/S1679-62252010000300001") Annotation( "PHENOSCAPE"^^xsd:string) "A third opening of the posttemporal fossa posteriorly located relative to the fossa. It is bordered completely by the epiocciptial, or by both the epioccipital and exoccipital.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "third posttemporal fossa") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2002095") AnnotationAssertion(rdfs:comment "Present in some characiforms.") AnnotationAssertion(rdfs:label "ventromedial opening of posttemporal fossa") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (bony plate series) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Anatomical cluster that consists of more than one bony plate in an individual.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion(Annotation( "TAO:0002096") "armor plate series") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2002096") AnnotationAssertion(rdfs:label "bony plate series") SubClassOf( ) # Class: (sensory canal pore series) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Anatomical cluster that consists of more than one sensory canal pore.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2002097") AnnotationAssertion(rdfs:label "sensory canal pore series") SubClassOf( ) # Class: (branchiostegal ray series) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Anatomical cluster that consists of the branchiostegal rays within an individual.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "TAO:0002101") "branchiostegals") AnnotationAssertion( "UBERON:2002101") AnnotationAssertion(rdfs:label "branchiostegal ray series") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (epibranchial series) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Anatomical cluster that consists of the epibranchial elements within an individual.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion(Annotation( "TAO:0002102") Annotation( ) "epibranchials") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2002102") AnnotationAssertion(rdfs:label "epibranchial series") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (ceratobranchial series) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Anatomical cluster that consists of the ceratobranchial elements within an individual.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2002103") AnnotationAssertion(rdfs:label "ceratobranchial series") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (electrosensory lateral line lobe) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Anatomical structure located in the hindbrain that receives primary electroreceptor input.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion(Annotation( "TAO:0002105") "ELL") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2002105") AnnotationAssertion(rdfs:comment "Definition reference: McNamara, AM., JP Denizot, CD Hopkins. 2005. Comparative Anatomy of the Electrosensory Lateral Line Lobe of Mormyrids: The Mystery of the Missing Map in the Genus Stomatorhinus (Family: Mormyridae). Brain, Behavior and Evolution 65:188-201.") AnnotationAssertion(rdfs:label "electrosensory lateral line lobe") SubClassOf( ) # Class: (eminentia granularis) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Anatomical structure that is a subdivision of the cerebellum; it is the location of some lateral line nerve synapses.") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion(Annotation( "TAO:0002106") "EG") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2002106") AnnotationAssertion(rdfs:comment "Definition based on Albert,2001 [Albert JS. 2001. Species Diversity and Phylogenetic systematics of American Knifefishes (Gymnotiformes, Teleostei). Miscellaneous Publications, Museum of Zoology, University of Michigan no. 190:140 pages.]") AnnotationAssertion(rdfs:label "eminentia granularis") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (medullary command nucleus) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Anatomical structure that consists of two neuron types: pacemaker cells and relay cells. The medullary command nucleus commands the timing of the electric organ discharge.") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion(Annotation( "TAO:0002107") "MCN") AnnotationAssertion(Annotation( "TAO:0002107") "medullary pacemaker nucleus") AnnotationAssertion(Annotation( "TAO:0002107") "pacemaker nucleus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2002107") AnnotationAssertion(rdfs:comment "Definition reference: Moortgat, KT, Bullock, TH, and Sejnowski TJ. 2000. J Neurophysiol 83: 971-983. Precision of the Pacemaker Nucleus in a Weakly Electric Fish: Network Versus Cellular Influences.") AnnotationAssertion(rdfs:label "medullary command nucleus") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (buccal papilla) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Papilla that is part of the mouth.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2002108") AnnotationAssertion(rdfs:label "buccal papilla") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (metapterygoid-quadrate fenestra) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2002110") AnnotationAssertion(rdfs:label "metapterygoid-quadrate fenestra") SubClassOf( ) # Class: (prootic bulla) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0005500") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2002111") AnnotationAssertion(rdfs:label "prootic bulla") SubClassOf( ) # Class: (cotylephore) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Multi-tissue structure that is a transient outgrowth of tissue on skin brooding fish that acts as an attachment site for embryos.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion(Annotation( "TAO:0002114") Annotation( ) "cotylephores") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2002114") AnnotationAssertion(rdfs:comment "Definition reference: James Wetzel, John P. Wourms and John Friel 1997. Comparative morphology of cotylephores in Platystacus and Solenostomus: modifications of the integument for egg attachment in skin-brooding fishes. Environmental Biology of Fishes. Volume 50, Number 1 / September, 1997. Pages 13 - 25.") AnnotationAssertion(rdfs:label "cotylephore") SubClassOf( ) SubClassOf( ) # Class: (epibranchial organ) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2002116") AnnotationAssertion(rdfs:label "epibranchial organ") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (ovipositor) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Organ that functions in egg deposition.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2002117") AnnotationAssertion(rdfs:label "ovipositor") SubClassOf( ) SubClassOf( ) # Class: (orbitosphenoid septum) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2002120") AnnotationAssertion(rdfs:label "orbitosphenoid septum") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (neural arch 5) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2002123") AnnotationAssertion(rdfs:label "neural arch 5") SubClassOf( ) # Class: (nuptial tubercle) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Surface structure that is a small protuberance on the surface of the body. Nuptial tubercles primarily function to facilitate contact between individuals for breeding.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion(Annotation( "TAO:0002124") "breeding tubercle") AnnotationAssertion(Annotation( "TAO:0002124") "contact organ") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2002124") AnnotationAssertion(rdfs:comment "Nuptial tubercles may be keratinized or nonkeratinized. Also may function in territorial defense or stimulation of females in breeding. Definition reference: Wiley, M. L. and B. B. Collette. 1970. Breeding tubercles and contact organs in fishes: Their occurrence, structure, and significance. Bull Am Mus Nat Hist 143: 143-216.") AnnotationAssertion(rdfs:label "nuptial tubercle") SubClassOf( ) # Class: (myorhabdoid bone) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Intermuscular bone that is located in the dorsal and ventral forward flexures of the myoseptum.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion(Annotation( "TAO:0002127") Annotation( ) "myorhabdoi") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2002127") AnnotationAssertion(rdfs:comment "Definition reference: Patterson, C., Johnson, G.D. 1995. The intermuscular bones and ligaments of teleostean fishes. Smithosonian Contributions to Zoology 559:1-85.") AnnotationAssertion(rdfs:label "myorhabdoid bone") SubClassOf( ) # Class: (cavum sinus imparis) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion(Annotation( "TAO:0002128") "cavum sinus impar") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2002128") AnnotationAssertion(rdfs:label "cavum sinus imparis") SubClassOf( ) # Class: (caudal appendage) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Multi-tissue structure that is region of the body posterior to the last anal-fin ray.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion(Annotation( "TAO:0002130") "caudal filament") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2002130") AnnotationAssertion(rdfs:comment "Comments: This is a gymnotiform structure. The caudal appendage can include vertebrae, a cartilginous rod, pterygiophores, anal-fin rays, and intermuscular bones. Definition reference: Albert, JS and WL Fink. 2007. PHYLOGENETIC RELATIONSHIPS OF FOSSIL NEOTROPICAL ELECTRIC FISHES (OSTEICHTHYES: GYMNOTIFORMES) FROM THE UPPER MIOCENE OF BOLIVIA. Journal of Vertebrate Paleontology 27(1):17-25.") AnnotationAssertion(rdfs:label "caudal appendage") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete horizontal septum) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Anatomical structure that consists of a sheet of connective tissue attached to the vertebral column and dividing the epaxial and hypaxial musculature.") AnnotationAssertion( "UBERON:0003901") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2002131") AnnotationAssertion(rdfs:label "obsolete horizontal septum") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (dorsal organ) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Surface structure that is a midsaggital strap of flattened ectodermal tissue extending along the posterodorsal midline.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2002133") AnnotationAssertion(rdfs:comment "Dorsal organ is a structure found in apteronotid gymnotiform fishes. Definition reference: Albert, JS and WL Fink. 2007. Phylogenetic relationships of fossil neotropical electric fish (Osteichthyes: Gymnotiformes) from the Upper Miocene of Bolivia. Journal of Vertebrate Paleontology 27:17-25.") AnnotationAssertion(rdfs:label "dorsal organ") SubClassOf( ) # Class: (annular ligament) AnnotationAssertion(Annotation( "ZFA:curator") "Ligament that is in the eye and is located at the angle between the cornea and the iris.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001676") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2002141") AnnotationAssertion(rdfs:label "annular ligament") SubClassOf( ) # Class: (obsolete anterior catecholaminergic tract) AnnotationAssertion(Annotation( "ZFIN:ZDB-PUB-091221-28") "CNS white matter, an axonal tract between ventral diencephalon and ventral telencephalon. At 3 d, the anterior catecholaminergic tract includes noradrenergic projections from the hindbrain and dopaminergic projections from ventral dopaminergic neurons. During later development, other catecholaminergic projections may also contribute to the anterior catecholaminergic tract.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0005342") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2002144") AnnotationAssertion(rdfs:label "obsolete anterior catecholaminergic tract") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (arrector muscle) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0005275") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2002147") AnnotationAssertion(rdfs:label "arrector muscle") SubClassOf( ) # Class: (vertebral element 9) AnnotationAssertion(Annotation( "TAO:curator") "Vertebra that is posteriorly adjacent to vertebra 8.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "9"^^xsd:nonNegativeInteger) AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0005351") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2002149") AnnotationAssertion(rdfs:label "vertebral element 9") SubClassOf( ) # Class: (vertebral element 10) AnnotationAssertion(Annotation( "TAO:curator") "Vertebra that is posteriorly adjacent to vertebra 9.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "10"^^xsd:nonNegativeInteger) AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0005353") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2002150") AnnotationAssertion(rdfs:label "vertebral element 10") SubClassOf( ) # Class: (vertebral element 11) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Vertebra that is posteriorly adjacent to vertebra 10.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "11"^^xsd:nonNegativeInteger) AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0005354") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2002151") AnnotationAssertion(rdfs:label "vertebral element 11") SubClassOf( ) # Class: (vertebral element 12) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Vertebra that is posteriorly adjacent to vertebra 11. May have hemal arch and rib.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "12"^^xsd:nonNegativeInteger) AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0005352") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2002152") AnnotationAssertion(rdfs:label "vertebral element 12") SubClassOf( ) # Class: (opercular cavity) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Anatomical space which is located beneath the operculum and external to the gills.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001654") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2002154") AnnotationAssertion(rdfs:label "opercular cavity") SubClassOf( ) # Class: (obsolete palatine) AnnotationAssertion(Annotation( "TAO:GA_TG"^^xsd:string) "Compound endochdondral and dermal bone that results from the fusion of the dermal dermopalatine and the endochondral autopalatine and forms the antero-lateral region of the palate. Commonly, it articulates with the maxilla antero-laterally and with the ethmoidal region medially. The palatine is paired.") AnnotationAssertion( "UBERON:0001682") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2002158") AnnotationAssertion(rdfs:comment "Depending on the teleostean group, the palatine may articulate with the entopterygoid posteriorly. The term palatine is usually used for the more advanced teleosts with a large autopalatine and a small dermopalatine represented by a few teeth.") AnnotationAssertion(rdfs:label "obsolete palatine") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (preural centrum 1 + ural centrum 1 + ural centrum 2) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Urostyle that is the result of fusion of preural centrum 1 with ural centra 1 and 2.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2002168") AnnotationAssertion(rdfs:label "preural centrum 1 + ural centrum 1 + ural centrum 2") SubClassOf( ) # Class: (branchial mesenchyme) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001650") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2002172") AnnotationAssertion(rdfs:label "branchial mesenchyme") SubClassOf( ) # Class: (octaval nerve motor nucleus) AnnotationAssertion(Annotation( ) "Hindbrain nucleus which consists of cell bodies whose axons exit the hindbrain via cranial nerve VIII and innervate hair cells of the lateral line and inner ear. The neurons of these nuclei are unusual in that they extend both contra- and ipsilateral dendrites.") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001697") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2002174") AnnotationAssertion(rdfs:label "octaval nerve motor nucleus") SubClassOf( ) SubClassOf( ) # Class: (rostral octaval nerve motor nucleus) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001698") AnnotationAssertion(Annotation( "TAO:0002175") "ROLE") AnnotationAssertion(Annotation( "TAO:0002175") "rostral cranial nerve VIII motor nucleus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2002175") AnnotationAssertion(rdfs:label "rostral octaval nerve motor nucleus") SubClassOf( ) # Class: (caudal octaval nerve motor nucleus) AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001699") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2002176") AnnotationAssertion(rdfs:label "caudal octaval nerve motor nucleus") SubClassOf( ) # Class: (obsolete peripheral nucleus of ventral telencephalon) AnnotationAssertion(Annotation( "ISBN:3764351209") Annotation( "ZFIN:curator"^^xsd:string) "Telencephalic nucleus which has migrated away from the ependyma and consists of the central, lateral nuclei and the dorsal and ventral entopeduncular nuclei. From Neuroanatomy of the Zebrafish Brain.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001667") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2002179") AnnotationAssertion(rdfs:label "obsolete peripheral nucleus of ventral telencephalon") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete central nucleus of ventral telencephalon) AnnotationAssertion(Annotation( "ISBN:3764351209") Annotation( "ZFIN:curator"^^xsd:string) "Peripheral nucleus of the ventral telencephalon which is located immediately lateral to the dorsal nucleus of the ventral telencephalon. From Neuroanatomy of the Zebrafish Brain.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001668") AnnotationAssertion(Annotation( "TAO:0002180") "area ventralis telencephali, nucleus centralis") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2002180") AnnotationAssertion(rdfs:label "obsolete central nucleus of ventral telencephalon") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (dorsolateral motor nucleus of vagal nerve) AnnotationAssertion(Annotation( "ZFIN:ZDB-PUB-090417-11") "Motor nucleus of vagal nerve that is located within the dorsolateral portion of rhomobomere 8.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001695") AnnotationAssertion(Annotation( "TAO:0002192") "dlX") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2002192") AnnotationAssertion(rdfs:label "dorsolateral motor nucleus of vagal nerve") SubClassOf( ) # Class: (dorsolateral septum) AnnotationAssertion(Annotation( "ZFIN:ZDB-PUB-961014-383") "Portion of tissue that grows in from the dorsolateral wall of the otic vesicle, forming a dorsolateral partition between the developing anterior and posterior semicircular canals.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001672") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "TAO:0002193") "dorsal bar") AnnotationAssertion( "UBERON:2002193") AnnotationAssertion(rdfs:label "dorsolateral septum") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (epidermal placode) AnnotationAssertion(Annotation( "ZFIN:ZDB-PUB-081008-12") "Portion of tissue that is a thickening and reshaping of the epidermal basal stratum cells beneath which fibroblasts accumulate to form the scale primordium.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001703") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2002195") AnnotationAssertion(rdfs:label "epidermal placode") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete head muscle) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Muscle which is part of the head.") AnnotationAssertion( "UBERON:0002376") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion(Annotation( "TAO:0002198") "cephalic muscle") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2002198") AnnotationAssertion(rdfs:label "obsolete head muscle") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete hindbrain commissure) AnnotationAssertion(Annotation( "ZFIN:ZDB-PUB-090417-11") "CNS white matter that crosses the midline within the hindbrain.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001692") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2002199") AnnotationAssertion(rdfs:label "obsolete hindbrain commissure") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (hypobranchial muscle) AnnotationAssertion(Annotation( "ZFIN:ZDB-PUB-080306-33") "Head muscle that originates on the anterior region of the cleithrum and inserts on the urohyal. The hypobranchial forms initially as left and right parts that later fuse together forming a cone shape.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001651") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "TAO:0002200") "sternohyoideus") AnnotationAssertion( "UBERON:2002200") AnnotationAssertion(rdfs:label "hypobranchial muscle") SubClassOf( ) # Class: (intermediate nucleus) AnnotationAssertion(Annotation( "ZFIN:ZDB-PUB-001220-2") "Diencephalic nucleus which is located between the dorsal hypothalamus and the caudal tuberal nucleus and does not contain tyrosine hydroxylase immunoreactive cells.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001669") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2002202") AnnotationAssertion(rdfs:label "intermediate nucleus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete immature Schwann cell) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001725") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2002203") AnnotationAssertion(rdfs:comment "Range covers Schwann cell precursor and immature Schwann cell, should be split and put into CL.") AnnotationAssertion(rdfs:label "obsolete immature Schwann cell") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete lateral nucleus of ventral telencephalon) AnnotationAssertion(Annotation( "ISBN:3764351209") Annotation( "ZFIN:curator"^^xsd:string) "Peripheral nucleus of the ventral telencephalon that has migrated to the periphery of the brain. From Neuroanatomy of the Zebrafish Brain.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0000176") AnnotationAssertion(Annotation( "TAO:0002204") "area ventralis telencephali, nucleus lateralis") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2002204") AnnotationAssertion(rdfs:label "obsolete lateral nucleus of ventral telencephalon") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (macula communis) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001671") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2002206") AnnotationAssertion(rdfs:label "macula communis") SubClassOf( ) # Class: (medial motor nucleus of vagal nerve) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001696") AnnotationAssertion(Annotation( "TAO:0002207") "mmX") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2002207") AnnotationAssertion(rdfs:label "medial motor nucleus of vagal nerve") SubClassOf( ) # Class: (obsolete mesonephric podocyte) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Podocyte that is part of the kidney (mesonephros).") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001674") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2002208") AnnotationAssertion(rdfs:label "obsolete mesonephric podocyte") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete optic nerve head) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Portion of cranial nerve II where large fasicles of axons from the optic fiber layer come together prior to leaving the eye.") AnnotationAssertion( "UBERON:0001783") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001625") AnnotationAssertion(Annotation( "TAO:0002213") Annotation( ) "optic nerve heads") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2002213") AnnotationAssertion(rdfs:comment "removed axiom: part_of some 'cranial nerve II'") AnnotationAssertion(rdfs:label "obsolete optic nerve head") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (otic vesicle protrusion) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001715") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2002215") AnnotationAssertion(rdfs:label "otic vesicle protrusion") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (otic vesicle ventral protrusion) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001716") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2002216") AnnotationAssertion(rdfs:label "otic vesicle ventral protrusion") SubClassOf( ) # Class: (parasphenoid-pterosphenoid joint) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2002217") AnnotationAssertion(rdfs:label "parasphenoid-pterosphenoid joint") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (parvocellular preoptic nucleus) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001680") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2002219") AnnotationAssertion(rdfs:label "parvocellular preoptic nucleus") SubClassOf( ) # Class: (pericardial muscle) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001653") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2002221") AnnotationAssertion(rdfs:label "pericardial muscle") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete periventricular nucleus of ventral telencephalon) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001666") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2002222") AnnotationAssertion(rdfs:label "obsolete periventricular nucleus of ventral telencephalon") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (pillar of the semicircular canal) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001717") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2002223") AnnotationAssertion(rdfs:label "pillar of the semicircular canal") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pleuroperitoneal cavity) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001656") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2002224") AnnotationAssertion(rdfs:label "pleuroperitoneal cavity") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (posterior pronephric duct) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001623") AnnotationAssertion(Annotation( "TAO:0002225") Annotation( ) "posterior pronephric ducts") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2002225") AnnotationAssertion(rdfs:label "posterior pronephric duct") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (preglomerular nucleus) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Diencephalic nucleus which is located in the caudal tuberculum. The preglomerular nuclei make up most of the migrated nuclei within the caudal tuberculum. From Neuroanatomy of the Zebrafish Brain.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001662") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2002226") AnnotationAssertion(rdfs:label "preglomerular nucleus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (presumptive atrium primitive heart tube) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001721") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2002229") AnnotationAssertion(rdfs:label "presumptive atrium primitive heart tube") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (presumptive cardiac ventricle primitive heart tube) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001720") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2002232") AnnotationAssertion(rdfs:label "presumptive cardiac ventricle primitive heart tube") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (presumptive ventral mesoderm) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001714") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2002235") AnnotationAssertion(rdfs:label "presumptive ventral mesoderm") SubClassOf( ) # Class: (obsolete pronephric podocyte) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Podocyte that is part of the pronephros.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001673") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2002237") AnnotationAssertion(rdfs:label "obsolete pronephric podocyte") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (Purkinje cell layer corpus cerebelli) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001706") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2002240") AnnotationAssertion(rdfs:label "Purkinje cell layer corpus cerebelli") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (scale primordium) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001704") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2002242") AnnotationAssertion(rdfs:label "scale primordium") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (supraoptic tract) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0001657") AnnotationAssertion(Annotation( "TAO:0002244") "SOT") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2002244") AnnotationAssertion(rdfs:label "supraoptic tract") SubClassOf( ) # Class: (obsolete pyloric caecum) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "UBERON:0008248") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion(Annotation( "TAO:0002253") "pyloric appendage") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2002253") AnnotationAssertion(rdfs:label "obsolete pyloric caecum") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (ocular side) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Organism subdivision that is the side of the body possessing eyes.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion(Annotation( "TAO:0002255") "eyed side") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2002255") AnnotationAssertion(rdfs:label "ocular side") SubClassOf( ) # Class: (blind side) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Organism subdivision that is the side of the body lacking eyes.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2002256") AnnotationAssertion(rdfs:label "blind side") SubClassOf( ) # Class: (premaxilla dentigerous process) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion(Annotation( "TAO:0002257") "premaxilla alveolar process") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2002257") AnnotationAssertion(rdfs:label "premaxilla dentigerous process") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (trituration tooth) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2002258") AnnotationAssertion(rdfs:label "trituration tooth") SubClassOf( ) # Class: (premaxillary-maxillary joint) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Joint that articulates the premaxilla and maxilla. Premaxillary-maxillary joint is paired.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2002260") AnnotationAssertion(rdfs:label "premaxillary-maxillary joint") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (epineural 1) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2002263") AnnotationAssertion(rdfs:label "epineural 1") SubClassOf( ) # Class: (epineural 2) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2002264") AnnotationAssertion(rdfs:label "epineural 2") SubClassOf( ) # Class: (epineural 3) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2002265") AnnotationAssertion(rdfs:label "epineural 3") SubClassOf( ) # Class: (epineural 4) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2002266") AnnotationAssertion(rdfs:label "epineural 4") SubClassOf( ) # Class: (epineural 5) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2002267") AnnotationAssertion(rdfs:label "epineural 5") SubClassOf( ) # Class: (epineural 6) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2002268") AnnotationAssertion(rdfs:label "epineural 6") SubClassOf( ) # Class: (interarcual cartilage) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Pharyngeal arch cartilage located between uncinate process of epibranchial 1 and pharyngobranchial 2.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion(Annotation( "TAO:0002269") "IAC") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2002269") AnnotationAssertion(rdfs:comment "An interarcual cartilage is present in percomorph fishes (Johnson and Patterson 1993).") AnnotationAssertion(rdfs:label "interarcual cartilage") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete median fin) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Fin that is an unpaired fin located in the sagittal plane of the organism.") AnnotationAssertion( "VSAO:0000162") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion(Annotation( "PSPUB:0000164"^^xsd:string) "nageoire impaire") AnnotationAssertion(Annotation( "PSPUB:0000140") "périssoptérygie") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2002276") AnnotationAssertion(rdfs:label "obsolete median fin") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (retractor posttemporalis) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2002281") AnnotationAssertion(rdfs:label "retractor posttemporalis") SubClassOf( ) # Class: (preopercle-opercle joint) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Joint that articulates the preopercle and opercle. Preopercle-opercle joint is paired.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2002282") AnnotationAssertion(rdfs:label "preopercle-opercle joint") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (melanophore spot) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion(Annotation( "TAO:0002283") "spot") AnnotationAssertion(Annotation( "TAO:0002283") Annotation( ) "spots") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2002283") AnnotationAssertion(rdfs:label "melanophore spot") SubClassOf( ) # Class: (body marking) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Surface structure that is a visible mark on the body resulting from pigmentation.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion(Annotation( "TAO:0002284") Annotation( ) "markings") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2002284") AnnotationAssertion(rdfs:label "body marking") SubClassOf( ) # Class: (obsolete aqueous humor) AnnotationAssertion(Annotation( "ZFIN:ZDB-PUB-050701-15") "Clear ocular fluid in the anterior segment of the eye. It is produced primarily by dorsal ciliary epithelial cells.") AnnotationAssertion( "UBERON:0001796") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0005564") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2002288") AnnotationAssertion(rdfs:label "obsolete aqueous humor") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete sclera) AnnotationAssertion(Annotation( "ZFIN:ZDB-PUB-050701-15") "Multi-tissue structure that composes the opaque fibrous outer layer of the eye.") AnnotationAssertion( "UBERON:0001773") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2002289") AnnotationAssertion(rdfs:label "obsolete sclera") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete vitreous) AnnotationAssertion(Annotation( ) "Portion of organism substance that is a gelatinous extracellular matrix structure that fills the vitreous cavity of the eye.") AnnotationAssertion( "UBERON:0001797") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0005561") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2002290") AnnotationAssertion(rdfs:label "obsolete vitreous") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (basal communicating artery) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0005000") AnnotationAssertion(Annotation( "TAO:0005000") "BCA") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2005000") AnnotationAssertion(rdfs:label "basal communicating artery") SubClassOf( ) SubClassOf( ) # Class: (mid cerebral vein) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "The mesencephalic veins (MsV) enter the mid cerebral veins (MCeV) at the dorsal midline. THe MCeVs originate at the dorsal midline, proceede lateraly in a ventral direction to drain into the paired primordial midbrain channels (PHBC). ogai et al. 2001., Kimmel et al. 1993.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0005010") AnnotationAssertion(Annotation( "TAO:0005010") "MCeV") AnnotationAssertion(Annotation( "TAO:0005010") "mid-cerebral vein") AnnotationAssertion(Annotation( "TAO:0005010") "middle cerebral vein") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2005010") AnnotationAssertion(rdfs:label "mid cerebral vein") SubClassOf( ) SubClassOf( ) # Class: (pseudobranchial artery) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "A vascular loop attached to the efferent part of the mandibular arch that forms at 3.5 dpf. Isogai et al. 2001.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0005011") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2005011") AnnotationAssertion(rdfs:label "pseudobranchial artery") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (primordial midbrain channel) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "The vessel between the anterior cerebral vein and the mid cerebral vein. Isogai et al. 2001.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0005017") AnnotationAssertion(Annotation( "TAO:0005017") "PMBC") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2005017") AnnotationAssertion(rdfs:label "primordial midbrain channel") SubClassOf( ) SubClassOf( ) # Class: (central artery) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Arteries that irrigate the forebrain and midbrain Isogai et al. 2001.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0005020") AnnotationAssertion(Annotation( "TAO:0005020") "CtA") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2005020") AnnotationAssertion(rdfs:label "central artery") SubClassOf( ) SubClassOf( ) # Class: (cerebellar central artery) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Extend upward from the PCS, branch to provide an arterial feed to the hindbrain, then drain back down into the PHBC Isogai et al. 2001.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0005021") AnnotationAssertion(Annotation( "TAO:0005021") "CCtA") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2005021") AnnotationAssertion(rdfs:label "cerebellar central artery") SubClassOf( ) # Class: (opercular artery) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "The opercular artery arises from the hyoid stump on the first aortic arch, then follows the lateral margin of the operculum (gill covering) ventrally to reconnect into the proximal part of the first aortic arch. Isogai et al. 2001.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0005022") AnnotationAssertion(Annotation( "TAO:0005022") "ORA") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "TAO:0005022") "external carotid artery") AnnotationAssertion( "UBERON:2005022") AnnotationAssertion(rdfs:label "opercular artery") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (primary head sinus) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Main route for venous drainage of the anterior and mid cerebral veins as well as portions of the primordial hindbrain channel. Isogai et al. 2001.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0005026") AnnotationAssertion(Annotation( "TAO:0005026") "PHS") AnnotationAssertion(Annotation( "TAO:0005026") "lateral head vein") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2005026") AnnotationAssertion(rdfs:label "primary head sinus") SubClassOf( ) SubClassOf( ) # Class: (posterior cerebral vein) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Vein that drains the dorsal longitudinal vessel and the caudal portions of the venous capillary network of the medulla oblongata. Isogai et al. 2001.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0005027") AnnotationAssertion(Annotation( "TAO:0005027") "PCeV") AnnotationAssertion(Annotation( "TAO:0005027") "caudal cerebral vein") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2005027") AnnotationAssertion(rdfs:label "posterior cerebral vein") SubClassOf( ) SubClassOf( ) # Class: (rostral blood island) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Hematopoietic tissue derived from the cephalic mesoderm. Predominantly produces myeloid cells. de Jong and Zon 2005.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0005029") AnnotationAssertion(Annotation( "TAO:0005029") "RBI") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2005029") AnnotationAssertion(rdfs:label "rostral blood island") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (dorsal ciliary vein) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0005030") AnnotationAssertion(Annotation( "TAO:0005030") "DCV") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2005030") AnnotationAssertion(rdfs:label "dorsal ciliary vein") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (dorsal longitudinal vein) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Vessel that connects to the primitive hindbrain channel and the basilar artery at the caudal end of the medulla oblongata. Isogai et al. 2001.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0005031") AnnotationAssertion(Annotation( "TAO:0005031") "DLV") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2005031") AnnotationAssertion(rdfs:label "dorsal longitudinal vein") SubClassOf( ) SubClassOf( ) # Class: (optic vein) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Vein that connects to the hyaloid vein that drains the eye. External to eye. Isogai et al. 2001.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0005032") AnnotationAssertion(Annotation( "TAO:0005032") "OV") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2005032") AnnotationAssertion(rdfs:label "optic vein") SubClassOf( ) SubClassOf( ) # Class: (supraintestinal artery) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "A continuation of the anterior mesenteric artery, which branches out from the dorsal aorta just caudal to the pronephric glomus. Isogai et al. 2001.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0005036") AnnotationAssertion(Annotation( "TAO:0005036") "SIA") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2005036") AnnotationAssertion(rdfs:label "supraintestinal artery") SubClassOf( ) # Class: (supraintestinal vein) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0005038") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2005038") AnnotationAssertion(rdfs:label "supraintestinal vein") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (anterior lateral mesoderm) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0005039") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2005039") AnnotationAssertion(rdfs:label "anterior lateral mesoderm") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete posterior lateral mesoderm) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0005040") AnnotationAssertion(Annotation( "TAO:0005040") "PLM") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2005040") AnnotationAssertion(rdfs:label "obsolete posterior lateral mesoderm") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (optic artery) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "The artery that carries blood to the eye. It branches from the internal carotid artery and enters the eye ventrally through the optic fissure. Isogai et al. 2001.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0005044") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2005044") AnnotationAssertion(rdfs:label "optic artery") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (primitive prosencephalic artery) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Vessel that branches from cranial division of the internal carotid artery, extending laterally around the rostral end of the head. Isogai et al. 2001.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0005048") AnnotationAssertion(Annotation( "TAO:0005048") "PPrA") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2005048") AnnotationAssertion(rdfs:label "primitive prosencephalic artery") SubClassOf( ) # Class: (prosencephalic artery) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "After the primitive prosencephalic artery forms it becomes disconnected from the cranial division of the internal carotid artery and instead it connects to the anterior mesencephalic central artery and the communicating vessels of the palatocerebral artery.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0005049") AnnotationAssertion(Annotation( "TAO:0005049") "PrA") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2005049") AnnotationAssertion(rdfs:label "prosencephalic artery") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (palatocerebral artery) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "The PLA branches ventrally from the CrDI. It extends rostrally along the base of mid- and forebrain, then loops medially and links to the corresponding vessel from the other side of the embryo. Isogai et al. 2001.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0005050") AnnotationAssertion(Annotation( "TAO:0005050") "PLA") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2005050") AnnotationAssertion(rdfs:label "palatocerebral artery") SubClassOf( ) # Class: (communicating vessel palatocerebral artery) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Connect the palatocerebral artery with the prosencephalic artery. Isogai et al. 2001.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0005051") AnnotationAssertion(Annotation( "TAO:0005051") "CMV") AnnotationAssertion(Annotation( "TAO:0005051") "communicating vessels") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2005051") AnnotationAssertion(rdfs:label "communicating vessel palatocerebral artery") SubClassOf( ) # Class: (anterior mesencephalic central artery) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Arteries that irrigate rostral regions of the midbrain. They extend between the Basial communicating artery to the anterior cerebral vein. Isogai et al. 2001.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0005052") AnnotationAssertion(Annotation( "TAO:0005052") "AMCtA") AnnotationAssertion(Annotation( "TAO:0005052") "rostral mesencephalic central artery") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2005052") AnnotationAssertion(rdfs:label "anterior mesencephalic central artery") SubClassOf( ) # Class: (nasal ciliary artery) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0005053") AnnotationAssertion(Annotation( "TAO:0005053") "NCA") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2005053") AnnotationAssertion(rdfs:label "nasal ciliary artery") SubClassOf( ) # Class: (inner optic circle) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0005054") AnnotationAssertion(Annotation( "TAO:0005054") "IOC") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2005054") AnnotationAssertion(rdfs:label "inner optic circle") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (median palatocerebral vein) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Drains the PLA loop proceeds straight caudally along the cranial midline just above the pharynx, just below the diencephalon. Forms a 'T' with the palatocerebral veins. Isogai et al. 2001.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0005055") AnnotationAssertion(Annotation( "TAO:0005055") "MPLV") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2005055") AnnotationAssertion(rdfs:label "median palatocerebral vein") SubClassOf( ) SubClassOf( ) # Class: (palatocerebral vein) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Vein that drains the median palatocerebral vein into the optic vein. Isogai et al. 2001.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0005056") AnnotationAssertion(Annotation( "TAO:0005056") "PLV") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2005056") AnnotationAssertion(rdfs:label "palatocerebral vein") SubClassOf( ) SubClassOf( ) # Class: (bulbus arteriosus outer layer) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Composed of scattered layers of interrupted elastic lamina. Hu et al. 2001.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0005066") AnnotationAssertion(Annotation( "TAO:0005066") "bulbus arteriosus externa") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2005066") AnnotationAssertion(rdfs:label "bulbus arteriosus outer layer") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (bulbus arteriosus middle layer) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Composed of 7-10 layers of helically arranged smooth muscle cells surrounded by a fine network of collagen, reticular, and elastic fibrils. Hu et al. 2001.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0005067") AnnotationAssertion(Annotation( "TAO:0005067") "bulbus arteriosus media") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2005067") AnnotationAssertion(rdfs:label "bulbus arteriosus middle layer") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (bulbus arteriosus inner layer) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Composed of subendothelium with longitudinally oriented collagen, reticular fibrils, elastic fibers, and smooth muscle cells bound by a thin endothelial layer. Hu et al. 2001.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0005068") AnnotationAssertion(Annotation( "TAO:0005068") "bulbus arteriosus intima") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2005068") AnnotationAssertion(rdfs:label "bulbus arteriosus inner layer") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (endocardial ring) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0005072") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2005072") AnnotationAssertion(rdfs:label "endocardial ring") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (atrioventricular ring) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0005073") AnnotationAssertion(Annotation( "TAO:0005073") "AV ring") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2005073") AnnotationAssertion(rdfs:label "atrioventricular ring") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (central cardiac conduction system) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Cardiac conduction system, characterized by slow impulse propagation and prolonged refractory periods.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0005074") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2005074") AnnotationAssertion(rdfs:label "central cardiac conduction system") SubClassOf( ) # Class: (peripheral cardiac conduction system) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Portion of the cardiac conduction system, with rapid impulse propagation.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0005075") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2005075") AnnotationAssertion(rdfs:label "peripheral cardiac conduction system") SubClassOf( ) # Class: (obsolete primordial vasculature) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0005076") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2005076") AnnotationAssertion(rdfs:label "obsolete primordial vasculature") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (middle mesencephalic central artery) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Project rostrally and dorsally from the AMCtA to to irrigate the midportion of the midbrain Isogai et al. 2001.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0005078") AnnotationAssertion(Annotation( "TAO:0005078") "MMCtA") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2005078") AnnotationAssertion(rdfs:label "middle mesencephalic central artery") SubClassOf( ) # Class: (posterior mesencephalic central artery) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Project dorsally from BCA to irrigate the caudal part of midbrain Isogai et al. 2001.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0005079") AnnotationAssertion(Annotation( "TAO:0005079") "PMCtA") AnnotationAssertion(Annotation( "TAO:0005079") "caudal mesencephalic central artery") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2005079") AnnotationAssertion(rdfs:label "posterior mesencephalic central artery") SubClassOf( ) # Class: (anterior mesenteric artery) AnnotationAssertion(Annotation( "ISBN10:0073040584") "Unpaired artery departing from dorsal aorta, typically supplying the small intestine.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0005080") AnnotationAssertion(Annotation( "TAO:0005080") "AMA") AnnotationAssertion(Annotation( "TAO:0005080") "rostral mesenteric artery") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2005080") AnnotationAssertion(rdfs:label "anterior mesenteric artery") SubClassOf(Annotation( "cjm"^^xsd:string) ) # Class: (dorsal branch nasal ciliary artery) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0005082") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2005082") AnnotationAssertion(rdfs:label "dorsal branch nasal ciliary artery") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (ventral branch nasal ciliary artery) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0005083") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2005083") AnnotationAssertion(rdfs:label "ventral branch nasal ciliary artery") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (metencephalic artery) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "These arteies branch dorsally from both sides of the posterior communicating artery looping up to join with the opposite MtA as well as with both middle cerebral veins at the dorsal midline of the head. Isogai et al. 2001.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0005084") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2005084") AnnotationAssertion(rdfs:label "metencephalic artery") SubClassOf( ) # Class: (nasal artery) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "The nasal arteries start at the internal carotid artey and travel rostrally, passing along the right and left walls of the nasal sac at the most rostral end of the head. From the nasal sac, the NA flows into the nasal veins. Isogai et al. 2001.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0005085") AnnotationAssertion(Annotation( "TAO:0005085") "NA") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2005085") AnnotationAssertion(rdfs:label "nasal artery") SubClassOf( ) # Class: (pectoral vein) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0005087") AnnotationAssertion(Annotation( "TAO:0005087") "PV") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2005087") AnnotationAssertion(rdfs:label "pectoral vein") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (posterior mesenteric artery) AnnotationAssertion(Annotation( "ISBN10:0073040584") "Unpaired artery departing from dorsal aorta that typically supplies the large intestine.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0005088") AnnotationAssertion(Annotation( "TAO:0005088") "PMA") AnnotationAssertion(Annotation( "TAO:0005088") "caudal mesenteric artery") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2005088") AnnotationAssertion(rdfs:label "posterior mesenteric artery") SubClassOf(Annotation( "cjm"^^xsd:string) ) # Class: (nasal vein) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0005093") AnnotationAssertion(Annotation( "TAO:0005093") "NV") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2005093") AnnotationAssertion(rdfs:label "nasal vein") SubClassOf( ) SubClassOf( ) # Class: (longitudinal lateral lymphatic vessel) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0005106") AnnotationAssertion(Annotation( "TAO:0005106") "LLL") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2005106") AnnotationAssertion(rdfs:label "longitudinal lateral lymphatic vessel") SubClassOf( ) # Class: (barbel primordium) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "A surface structure that will eventually grow to form a barbel. The primordium is rich in taste buds. The final location for taste buds present in the primordium is the distal tip of the mature barbel.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0005119") AnnotationAssertion(Annotation( "TAO:0005119") Annotation( ) "barbel primordia") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2005119") AnnotationAssertion(rdfs:label "barbel primordium") SubClassOf( ) # Class: (dorsal axial hypoblast) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0005122") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2005122") AnnotationAssertion(rdfs:label "dorsal axial hypoblast") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (intestinal bulb epithelium) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Intestinal epithelium which lines the lumen of the intestinal bulb.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0005126") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2005126") AnnotationAssertion(rdfs:label "intestinal bulb epithelium") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (primary dental epithelium) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Epithelium that surrounds a primary tooth. This epithelium is committed to formation of replacement teeth.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0005135") AnnotationAssertion(Annotation( "TAO:0005135") "pharyngeal tooth epithelium") AnnotationAssertion(Annotation( "TAO:0005135") "primary tooth epithelium") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2005135") AnnotationAssertion(rdfs:label "primary dental epithelium") SubClassOf( ) # Class: (obsolete enameloid) AnnotationAssertion(Annotation( "VSAO:curator"^^xsd:string) "Skeletal tissue that is hypermineralized and aprismatic and deposited by a combination of ameloblasts and odontoblasts that are excluded from the matrix. Enameloid develops from pre-enameloid tissue.") AnnotationAssertion( "UBERON:0011692") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2005142") AnnotationAssertion(rdfs:label "obsolete enameloid") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (ampullary nerve) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "A branch of the 8th cranial nerve that innervates the cristae ampullaris.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0005144") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2005144") AnnotationAssertion(rdfs:label "ampullary nerve") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (distal epidermal cap of regenerating fin/limb) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Part of regeneration epithelium at the tip of the fin/limb [ZFA,modified].") AnnotationAssertion( "TAO:0005149") AnnotationAssertion( "ZFA:0005149") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2005149") AnnotationAssertion(rdfs:label "distal epidermal cap of regenerating fin/limb") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (basal regeneration epithelium of regenerating fin/limb) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Layer of the wound epidermis that surrounds the blastema in the fin or limb[ZFA,modified].") AnnotationAssertion( "TAO:0005150") AnnotationAssertion( "ZFA:0005150") AnnotationAssertion(Annotation( "TAO:0005150") "basal wound epidermis") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2005150") AnnotationAssertion(rdfs:label "basal regeneration epithelium of regenerating fin/limb") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete gold iridophore) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Iridescent iridophore containing gold reflecting platelets.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0005151") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2005151") AnnotationAssertion(rdfs:label "obsolete gold iridophore") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete silver iridophore) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Iridescent iridophore containing silver reflecting platelets.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0005152") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2005152") AnnotationAssertion(rdfs:label "obsolete silver iridophore") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (extrahepatic duct) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Bile duct that collects from the intrahepatic ducts and feeds into the common bile duct.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0005170") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2005170") AnnotationAssertion(rdfs:label "extrahepatic duct") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete CoPA) AnnotationAssertion(Annotation( "ZFIN:ZDB-PUB-010807-17") Annotation( "ZFIN:ZDB-PUB-961014-274") Annotation( "ZFIN:ZDB-PUB-961014-649") "An interneuron in the spinal cord. CoPA are bipolar with 'T' shaped dorsal dendrites, have contralateral longitudinal axons that crosses the cord dorsal to the Mauthner neuron and ascends in the dorsal cord.") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0005175") AnnotationAssertion(Annotation( "TAO:0005175") "primary commissural interneuron") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2005175") AnnotationAssertion(rdfs:comment "This term entered TAO as a leaf node in the zebrafish AO and is not in the CL. incorrectly generalized to teleosts") AnnotationAssertion(rdfs:label "obsolete CoPA") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete CoSA) AnnotationAssertion(Annotation( "ZFIN:ZDB-PUB-010807-17") Annotation( "ZFIN:ZDB-PUB-961014-649") "An interneuron of the spinal cord. CoSA, have contralateral longitudinal axons that crosses the cord dorsal to the Mauthner neuron and ascends in the dorsal cord.") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0005176") AnnotationAssertion(Annotation( "TAO:0005176") "secondary commissural interneuron") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2005176") AnnotationAssertion(rdfs:comment "This term entered TAO as a leaf node in the zebrafish AO and is not in the CL. obsoleting because incorrectly generalized to teleosts.") AnnotationAssertion(rdfs:label "obsolete CoSA") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete VeLD) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0005177") AnnotationAssertion(Annotation( "TAO:0005177") "ventral longitudinal interneuron") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "TAO:0005177") "V2b interneuron") AnnotationAssertion( "UBERON:2005177") AnnotationAssertion(rdfs:comment "This term entered TAO as a leaf node in the zebrafish AO and is not in the CL. incorrectly generalized to teleosts so being obsoleted.") AnnotationAssertion(rdfs:label "obsolete VeLD") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete DoLA) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0005178") AnnotationAssertion(Annotation( "TAO:0005178") "dorsal longitudinal interneuron") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2005178") AnnotationAssertion(rdfs:comment "This term entered TAO as a leaf node in the zebrafish AO and is not in the CL. incorrectly generalized to teleosts so being obsoleted.") AnnotationAssertion(rdfs:label "obsolete DoLA") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete MiP motor neuron) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0005179") AnnotationAssertion(Annotation( "TAO:0005179") "middle primary motoneuron") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2005179") AnnotationAssertion(rdfs:comment "This term entered TAO as a leaf node in the zebrafish AO and is not in the CL.") AnnotationAssertion(rdfs:label "obsolete MiP motor neuron") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete RoP motor neuron) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0005180") AnnotationAssertion(Annotation( "TAO:0005180") "rostral primary motoneuron") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2005180") AnnotationAssertion(rdfs:comment "This term entered TAO as a leaf node in the zebrafish AO and is not in the CL.") AnnotationAssertion(rdfs:label "obsolete RoP motor neuron") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete VaP motor neuron) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0005181") AnnotationAssertion(Annotation( "TAO:0005181") "variable primary motoneuron") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2005181") AnnotationAssertion(rdfs:comment "This term entered TAO as a leaf node in the zebrafish AO and is not in the CL.") AnnotationAssertion(rdfs:label "obsolete VaP motor neuron") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete t-interneuron) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0005182") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2005182") AnnotationAssertion(rdfs:comment "This term entered TAO as a leaf node in the zebrafish AO and is not in the CL.") AnnotationAssertion(rdfs:label "obsolete t-interneuron") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete MiD2i) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0005183") AnnotationAssertion(Annotation( "TAO:0005183") "middle dorsal 2 ipsilateral interneuron") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2005183") AnnotationAssertion(rdfs:comment "This term entered TAO as a leaf node in the zebrafish AO and is not in the CL") AnnotationAssertion(rdfs:label "obsolete MiD2i") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete MiD2cl) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0005184") AnnotationAssertion(Annotation( "TAO:0005184") "middle dorsal 2 contralateral llf interneuron") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2005184") AnnotationAssertion(rdfs:comment "This term entered TAO as a leaf node in the zebrafish AO and is not in the CL") AnnotationAssertion(rdfs:label "obsolete MiD2cl") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete MiD2cm) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0005185") AnnotationAssertion(Annotation( "TAO:0005185") "middle dorsal 2 contralateral mlf interneuron") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2005185") AnnotationAssertion(rdfs:comment "This term entered TAO as a leaf node in the zebrafish AO and is not in the CL") AnnotationAssertion(rdfs:label "obsolete MiD2cm") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete CoB) AnnotationAssertion(Annotation( "ZFIN:ZDB-PUB-961014-649") "A bifurcate interneuron. It is a commissural neuron with both ascending and descending axons in the ventrolateral cord contralateral to its cell body.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0005186") AnnotationAssertion(Annotation( "TAO:0005186") "bifurcate commissural interneuron") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2005186") AnnotationAssertion(rdfs:comment "This term entered TAO as a leaf node in the zebrafish AO and is not in the CL. This may be the same as CoBL. incorrectly generalized to teleosts so being obsoleted.") AnnotationAssertion(rdfs:label "obsolete CoB") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete MiM1) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0005187") AnnotationAssertion(Annotation( "TAO:0005187") "middle medial interneuron") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2005187") AnnotationAssertion(rdfs:label "obsolete MiM1") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete MiR1) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0005188") AnnotationAssertion(Annotation( "TAO:0005188") "middle rostral 1 interneuron") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2005188") AnnotationAssertion(rdfs:label "obsolete MiR1") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete MiR2) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0005189") AnnotationAssertion(Annotation( "TAO:0005189") "middle rostral 2 interneuron") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2005189") AnnotationAssertion(rdfs:label "obsolete MiR2") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete MiV1) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0005190") AnnotationAssertion(Annotation( "TAO:0005190") "middle ventral 1 neuron") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2005190") AnnotationAssertion(rdfs:label "obsolete MiV1") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete MiV2) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0005191") AnnotationAssertion(Annotation( "TAO:0005191") "middle ventral 2 neuron") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2005191") AnnotationAssertion(rdfs:label "obsolete MiV2") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete RoI2C) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0005192") AnnotationAssertion(Annotation( "TAO:0005192") "rostral intermediate 2 caudal interneuron") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2005192") AnnotationAssertion(rdfs:label "obsolete RoI2C") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete RoI2R) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0005193") AnnotationAssertion(Annotation( "TAO:0005193") "rostral intermediate 2 rostral interneuron") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2005193") AnnotationAssertion(rdfs:label "obsolete RoI2R") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete RoL1) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0005194") AnnotationAssertion(Annotation( "TAO:0005194") "rostral lateral 1 interneuron") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2005194") AnnotationAssertion(rdfs:comment "May have 12 neurons in each hemi rhombomere ZDB-PUB-060217-9 7 neurons in each hemi rhombomere 080227-17 and 931014-770") AnnotationAssertion(rdfs:label "obsolete RoL1") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete MiD3cl) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0005195") AnnotationAssertion(Annotation( "TAO:0005195") "middle dorsal 3 contralateral llf interneuron") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2005195") AnnotationAssertion(rdfs:comment "This term entered TAO as a leaf node in the zebrafish AO and is not in the CL.") AnnotationAssertion(rdfs:label "obsolete MiD3cl") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete MiD3cm) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0005196") AnnotationAssertion(Annotation( "TAO:0005196") "middle dorsal 3 contralateral mlf interneuron") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2005196") AnnotationAssertion(rdfs:comment "This term entered TAO as a leaf node in the zebrafish AO and is not in the CL.") AnnotationAssertion(rdfs:label "obsolete MiD3cm") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete MiD3i) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0005197") AnnotationAssertion(Annotation( "TAO:0005197") "middle dorsal 3 ipsilateral interneuron") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2005197") AnnotationAssertion(rdfs:comment "This term entered TAO as a leaf node in the zebrafish AO and is not in the CL.") AnnotationAssertion(rdfs:label "obsolete MiD3i") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete RoL2) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0005198") AnnotationAssertion(Annotation( "TAO:0005198") "rostral lateral 2 interneuron") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2005198") AnnotationAssertion(rdfs:label "obsolete RoL2") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete RoL2r) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0005199") AnnotationAssertion(Annotation( "TAO:0005199") "rostral lateral 2 rostral interneuron") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2005199") AnnotationAssertion(rdfs:label "obsolete RoL2r") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete RoL2c) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0005200") AnnotationAssertion(Annotation( "TAO:0005200") "rostral lateral 2 caudal interneuron") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2005200") AnnotationAssertion(rdfs:label "obsolete RoL2c") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete obsolete RoL3) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0005201") AnnotationAssertion(Annotation( "TAO:0005201") "rostral lateral 3 interneuron") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2005201") AnnotationAssertion(rdfs:label "obsolete obsolete RoL3") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete RoM1c) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0005202") AnnotationAssertion(Annotation( "TAO:0005202") "rostral medial 1 caudal interneuron") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2005202") AnnotationAssertion(rdfs:label "obsolete RoM1c") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete RoM1r) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0005203") AnnotationAssertion(Annotation( "TAO:0005203") "rostral medial 1 rostral interneuron") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2005203") AnnotationAssertion(rdfs:label "obsolete RoM1r") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete rostral ventral 3 interneuron) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion(Annotation( "TAO:0005204") "RoV3") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2005204") AnnotationAssertion(rdfs:label "obsolete rostral ventral 3 interneuron") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete RoM2l) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0005205") AnnotationAssertion(Annotation( "TAO:0005205") "rostral medial 2 lateral interneuron") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2005205") AnnotationAssertion(rdfs:label "obsolete RoM2l") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete RoM2m) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0005206") AnnotationAssertion(Annotation( "TAO:0005206") "rostral medial 2 medial interneuron") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2005206") AnnotationAssertion(rdfs:label "obsolete RoM2m") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete RoM3l) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0005207") AnnotationAssertion(Annotation( "TAO:0005207") "rostral medial 3 lateral interneuron") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2005207") AnnotationAssertion(rdfs:label "obsolete RoM3l") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete RoM3m) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0005208") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "TAO:0005208") "rostral medial 3 medial interneuron") AnnotationAssertion( "UBERON:2005208") AnnotationAssertion(rdfs:label "obsolete RoM3m") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete hindbrain interneuron) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0005209") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2005209") AnnotationAssertion(rdfs:label "obsolete hindbrain interneuron") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete midbrain interneuron) AnnotationAssertion(Annotation( "ZFIN:Curator") "CNS interneurons located in the midbrain.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0005210") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2005210") AnnotationAssertion(rdfs:label "obsolete midbrain interneuron") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete MeL) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0005211") AnnotationAssertion(Annotation( "TAO:0005211") "mesencephalon lateral interneuron") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2005211") AnnotationAssertion(rdfs:label "obsolete MeL") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete MeM) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0005212") AnnotationAssertion(Annotation( "TAO:0005212") "mesencephalon medial interneuron") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2005212") AnnotationAssertion(rdfs:label "obsolete MeM") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete MeLr) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0005213") AnnotationAssertion(Annotation( "TAO:0005213") "mesencephalon lateral rostral interneuron") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2005213") AnnotationAssertion(rdfs:label "obsolete MeLr") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete MeLc) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0005214") AnnotationAssertion(Annotation( "TAO:0005214") "mesencephalon lateral caudal interneuron") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2005214") AnnotationAssertion(rdfs:label "obsolete MeLc") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete MeLm) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0005215") AnnotationAssertion(Annotation( "TAO:0005215") "mesencephalon lateral medial interneuron") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2005215") AnnotationAssertion(rdfs:label "obsolete MeLm") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete MeM1) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0005216") AnnotationAssertion(Annotation( "TAO:0005216") "mesencephalon medial 1 interneuron") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2005216") AnnotationAssertion(rdfs:label "obsolete MeM1") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete CaV) AnnotationAssertion(Annotation( "ZFIN:ZDB-PUB-961014-770") "Hindbrain interneuron that is part of rhombomere 7, with 2 ventral neurons in each hemi-rhombomere.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0005217") AnnotationAssertion(Annotation( "TAO:0005217") "caudal ventral interneuron") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2005217") AnnotationAssertion(rdfs:label "obsolete CaV") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete CaD) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0005218") AnnotationAssertion(Annotation( "TAO:0005218") "caudal dorsal interneuron") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2005218") AnnotationAssertion(rdfs:label "obsolete CaD") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (choroid plexus vascular circuit) AnnotationAssertion(Annotation( "ZFIN:ZDB-PUB-080908-11") "Cranial vasculature where the posterior cerebral veins and the trans-choroid plexus branch form a circuit around the 4th ventricle choroid plexus.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0005219") AnnotationAssertion(Annotation( "TAO:0005219") "CVC") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "TAO:0005219") "choroid vascular circuit") AnnotationAssertion( "UBERON:2005219") AnnotationAssertion(rdfs:label "choroid plexus vascular circuit") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (larval melanophore stripe) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0005220") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2005220") AnnotationAssertion(rdfs:label "larval melanophore stripe") SubClassOf( ) # Class: (dorsal larval melanophore stripe) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0005221") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2005221") AnnotationAssertion(rdfs:label "dorsal larval melanophore stripe") SubClassOf( ) # Class: (ventral larval melanophore stripe) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0005222") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2005222") AnnotationAssertion(rdfs:label "ventral larval melanophore stripe") SubClassOf( ) # Class: (lateral larval melanophore stripe) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0005223") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2005223") AnnotationAssertion(rdfs:label "lateral larval melanophore stripe") SubClassOf( ) # Class: (yolk larval melanophore stripe) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0005224") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2005224") AnnotationAssertion(rdfs:label "yolk larval melanophore stripe") SubClassOf( ) # Class: (obsolete segmented lepidotrichium) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion(Annotation( ) "Lepidotrichium that is articulated or segmented, and that can be simple or branched.") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion(Annotation( "TAO:0005228") "segmented ray") AnnotationAssertion( "soft ray") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2005228") AnnotationAssertion(rdfs:label "obsolete segmented lepidotrichium") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete CoBL) AnnotationAssertion(Annotation( "ZFIN:ZDB-PUB-010807-17") "A bifurcate interneuron where the axon projects ventrally, crossing the spinal cord ventral to the Mauthner axons before bifurcating and extending dorsally.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0005230") AnnotationAssertion(Annotation( "TAO:0005230") "commissural bifurcating longitudinal") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2005230") AnnotationAssertion(rdfs:comment "incorrectly generalized to teleosts so being obsoleted.") AnnotationAssertion(rdfs:label "obsolete CoBL") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete bifurcate interneuron) AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0005231") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2005231") AnnotationAssertion(rdfs:comment "Not in scope of uberon") AnnotationAssertion(rdfs:label "obsolete bifurcate interneuron") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete MCoD) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0005232") AnnotationAssertion(Annotation( "TAO:0005232") "multipolar commissural descending interneuron") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2005232") AnnotationAssertion(rdfs:comment "incorrectly generalized to teleosts so being obsoleted.") AnnotationAssertion(rdfs:label "obsolete MCoD") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete CiD) AnnotationAssertion(Annotation( "ZFIN:ZDB-PUB-010807-17") "An interneuron of the spinal cord with an ipsilateral axon that extends ventral to the Mauthner axon then turns dorsally and caudally and sometimes has a minor ascending branch.") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0005233") AnnotationAssertion(Annotation( "TAO:0005233") "circumferential descending interneuron") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "TAO:0005233") "V2a interneuron") AnnotationAssertion( "UBERON:2005233") AnnotationAssertion(rdfs:comment "incorrectly generalized to teleosts") AnnotationAssertion(rdfs:label "obsolete CiD") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete CoLA) AnnotationAssertion(Annotation( "ZFIN:ZDB-PUB-010807-17") "A spinal interneuron with a dorsal dendrite that extends caudally. CoLA also has midlateral process that extend rostrally and caudally, the axon crosses the cord dorsal to the Mauthner cell and ascends, extending dorsally. Axon has minor descending branch.") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0005234") AnnotationAssertion(Annotation( "TAO:0005234") "commissural longitudinal ascending interneuron") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2005234") AnnotationAssertion(rdfs:comment "incorrectly generalized to teleosts") AnnotationAssertion(rdfs:label "obsolete CoLA") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete UCoD) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0005235") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "TAO:0005235") "unipolar commissural descending interneuron") AnnotationAssertion( "UBERON:2005235") AnnotationAssertion(rdfs:comment "incorrectly generalized to teleosts so being obsoleted.") AnnotationAssertion(rdfs:label "obsolete UCoD") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete micropylar cell) AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0005239") AnnotationAssertion(Annotation( "TAO:0005239") "plug cell") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2005239") AnnotationAssertion(rdfs:comment "replaced by CL_0007022 once cl is released.") AnnotationAssertion(rdfs:label "obsolete micropylar cell") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete Kolmer-Agduhr neuron) AnnotationAssertion(Annotation( "ZFIN:ZDB-PUB-080825-21") "Kolmer-Agduhr neurons are ciliated GABAergic neurons that contact the central canal of the spinal cord and have ipsilateral ascending axons.") AnnotationAssertion( "CL:0005007") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0005240") AnnotationAssertion(Annotation( "TAO:0005240") "KA cell") AnnotationAssertion(Annotation( "TAO:0005240") "Kolmer-Agduhr cell") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2005240") AnnotationAssertion(rdfs:label "obsolete Kolmer-Agduhr neuron") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete polychromatophilic erythroblast) AnnotationAssertion( "CL:0000550") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0005241") AnnotationAssertion(Annotation( "TAO:0005241") "intermediate erythroblast") AnnotationAssertion(Annotation( "TAO:0005241") "polychromatic erythroblast") AnnotationAssertion(Annotation( "TAO:0005241") "polychromatic normoblast") AnnotationAssertion(Annotation( "TAO:0005241") "rubricyte") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "TAO:0005241") "intermediate normoblast") AnnotationAssertion(Annotation( "TAO:0005241") "polychromatophilic normoblast") AnnotationAssertion( "UBERON:2005241") AnnotationAssertion(rdfs:label "obsolete polychromatophilic erythroblast") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete auditory epithelial support cell) AnnotationAssertion( "CL:0005014") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0005244") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2005244") AnnotationAssertion(rdfs:label "obsolete auditory epithelial support cell") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (inter-parietal joint) AnnotationAssertion(Annotation( "ZFA:ZDB-PUB-060323-12") "Fibrous joint connecting the parietal bones.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "wasila.dahdul") AnnotationAssertion( "2012-02-10T04:18:40Z") AnnotationAssertion( "ZFA:0005607") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "TAO:0005245") "sagittal suture") AnnotationAssertion( "UBERON:2005245") AnnotationAssertion(rdfs:label "inter-parietal joint") SubClassOf( ) # Class: (obsolete regeneration fibroblast) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Is a fibroblast that differentiates from the de-differentiated cells of the blastema.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0005246") AnnotationAssertion(Annotation( "TAO:0005246") "blastemal fibroblast") AnnotationAssertion(Annotation( "TAO:0005246") Annotation( ) "blastemal fibroblasts") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2005246") AnnotationAssertion(rdfs:label "obsolete regeneration fibroblast") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete CiA) AnnotationAssertion(Annotation( "ZFIN:ZDB-PUB-040625-12") Annotation( "ZFIN:ZDB-PUB-060418-1") "Interneurons of the spinal cord that arise from the V1 proliferation domain. The CiA neurons inhibit motoneurons, other ventral interneurons and also inhibit dorsal sensory neurons involved in sensory gating,. CiA have ipsilateral axonal projections in both motor and sensory regions of spinal cord.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0005247") AnnotationAssertion(Annotation( "TAO:0005247") "circumferential ascending interneuron") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2005247") AnnotationAssertion(rdfs:comment "incorrectly generalized to teleosts/vertebrates.") AnnotationAssertion(rdfs:label "obsolete CiA") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (trans-choroid plexus branch) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0005248") AnnotationAssertion(Annotation( "TAO:0005248") "TCB") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2005248") AnnotationAssertion(rdfs:label "trans-choroid plexus branch") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete frontal-parietal joint) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "UBERON:0016631") AnnotationAssertion( "ZFA:0005608") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2005255") AnnotationAssertion(rdfs:label "obsolete frontal-parietal joint") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (intervillus pockets) AnnotationAssertion(Annotation( "ZFIN:ZDB-PUB-050209-3") "A portion of tissue formed between the base of the intestinal villi that is part of the intestinal epithelium where intestinal stem cells are located. In the intestine no crypts are present, but, the regions between the villi, the intervillus pockets, have a crypt-like function. Cells are produced in the intervillus pockets and shed from the villus tips.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0005256") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2005256") AnnotationAssertion(rdfs:label "intervillus pockets") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (continuous capillary) AnnotationAssertion(Annotation( ) "Capillary that has endothelial cells that provide an uninterrupted lining, and only allow small molecules, like water and ions to diffuse through tight junctions which leave gaps of unjoined membrane which are called intercellular clefts.") AnnotationAssertion( "Blood vessel endothelium that has tight junctions between the endothelial cells[ZFA].") AnnotationAssertion( "continuous blood vessel endothelium") AnnotationAssertion( "continuous endothelium") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:63195") AnnotationAssertion( "NCIT:C32370") AnnotationAssertion( "TAO:0005259") AnnotationAssertion(Annotation( "ncithesaurus:Continuous_Capillary") "UMLS:C1179614") AnnotationAssertion( "ZFA:0005259") AnnotationAssertion(Annotation( "ZFA:0005259") "continuous blood vessel endothelium") AnnotationAssertion(Annotation( "FMA:63195") "continuous capillary vessel") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2005259") AnnotationAssertion(rdfs:label "continuous capillary") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf(Annotation( "ZFA"^^xsd:string) ) # Class: (fenestrated capillary) AnnotationAssertion(Annotation( ) Annotation( ) "Capillary that has pores in the endothelial cells (60-80 nm in diameter) that are spanned by a diaphragm of radially oriented fibrils and allow small molecules and limited amounts of protein to diffuse.") AnnotationAssertion( "the ZFA class from which this was derived is not explicitly classified as a capillary - need to verify for taxon histology differences") AnnotationAssertion( "Blood vessel endothelium that has pores that allow passage small molecules and proteins[ZFA].") AnnotationAssertion(Annotation( "ZFA:0005260") "fenestrated blood vessel endothelium") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FMA:63196") AnnotationAssertion( "NCIT:C32595") AnnotationAssertion( "TAO:0005260") AnnotationAssertion(Annotation( "ncithesaurus:Fenestrated_Capillary") "UMLS:C1179615") AnnotationAssertion( "ZFA:0005260") AnnotationAssertion(Annotation( "FMA:63196") "fenestrated capillary vessel") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2005260") AnnotationAssertion(rdfs:label "fenestrated capillary") SubClassOf(Annotation( "FMA"^^xsd:string) ) SubClassOf(Annotation( "ZFA"^^xsd:string) ) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (supraoccipital-parietal joint) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0005609") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2005264") AnnotationAssertion(rdfs:label "supraoccipital-parietal joint") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (hyomandibula-opercle joint) AnnotationAssertion(Annotation( "ZFIN:CVS") "Synovial joint that articulates the hyomandibula and the opercle.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "haendel") AnnotationAssertion( "2012-04-09T06:34:33Z") AnnotationAssertion( "ZFA:0005626") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2005265") AnnotationAssertion(rdfs:label "hyomandibula-opercle joint") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pterotic fossa) AnnotationAssertion(Annotation( "ZFIN:ZDB-PUB-961014-192") "Fossa on the pterotic where the hyomandibula articulates.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "haendel") AnnotationAssertion( "2012-04-09T06:50:18Z") AnnotationAssertion( "ZFA:0005630") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2005266") AnnotationAssertion(rdfs:label "pterotic fossa") SubClassOf( ) # Class: (erector muscle) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Muscle that moves parts of the body in a superior direction to an erect position. Antagonistic to depressor muscle.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0005267") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2005267") AnnotationAssertion(rdfs:label "erector muscle") SubClassOf( ) # Class: (preopercle horizontal limb-symplectic joint) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Joint that articulates the posterior edge of the preopercle horizontal limb with the symplectic.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "haendel") AnnotationAssertion( "2012-04-09T07:25:19Z") AnnotationAssertion( "ZFA:0005631") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2005268") AnnotationAssertion(rdfs:comment "In ZFA, is a type of fibrous joint. May need to stay more general in TAO.") AnnotationAssertion(rdfs:label "preopercle horizontal limb-symplectic joint") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (hypophyseal fenestra) AnnotationAssertion(Annotation( "ZFIN:ZDB-PUB-961014-192") "Space enclosed by the trabeculae cranii. The anterior tip of the notochord extends into the posterior region of the hypophyseal fenestra.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "haendel") AnnotationAssertion( "2012-04-09T07:33:26Z") AnnotationAssertion( "ZFA:0005625") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2005269") AnnotationAssertion(rdfs:label "hypophyseal fenestra") SubClassOf( ) # Class: (depressor muscle) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "A muscle that moves body parts into an inferior direction or lowered position. Antagonistic to erector muscle.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0005270") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2005270") AnnotationAssertion(rdfs:label "depressor muscle") SubClassOf( ) # Class: (immature gonad) AnnotationAssertion(Annotation( "ZFIN:ZDB-PUB-070305-2") "Immature reproductive tissue that has not undergone final maturation into either testis or ovary. During gonadal development, the gonad may be transiently intersexual where there is a parallel presence of both oocytes and spermatocytes.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0005272") AnnotationAssertion(Annotation( "TAO:0005272") "juvenile gonad") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2005272") AnnotationAssertion(rdfs:label "immature gonad") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (intestinal mucosal muscle) AnnotationAssertion(Annotation( "ZFIN:ZDB-PUB-090217-11") "A thin layer of smooth muscle immediately beneath the base of the villi which permits the intestinal mucosa to dynamically move and fold.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0005273") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "intestinal lamina muscularis mucosae") AnnotationAssertion( "UBERON:2005273") AnnotationAssertion(rdfs:label "intestinal mucosal muscle") SubClassOf( ) # Class: (hyomandibular foramen) AnnotationAssertion(Annotation( "ZFIN:ZDB-PUB-961014-192") "Foramen in the hyomandibula that allows passage of the anterior lateral line nerve and the facial nerve (cranial nerve VII).") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "haendel") AnnotationAssertion( "2012-04-09T07:39:00Z") AnnotationAssertion( "ZFA:0005629") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2005275") AnnotationAssertion(rdfs:label "hyomandibular foramen") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (inclinator muscle) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "ZFA:0005276") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2005276") AnnotationAssertion(rdfs:label "inclinator muscle") SubClassOf( ) # Class: (preopercle vertical limb-hyomandibula joint) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Joint that articulates the anterior edge of the preopercle vertical limb and the hyomandibula.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "haendel") AnnotationAssertion( "2012-04-09T07:41:34Z") AnnotationAssertion( "ZFA:0005632") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2005278") AnnotationAssertion(rdfs:label "preopercle vertical limb-hyomandibula joint") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (enteric circular muscle) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Smooth muscle of the enteric muscle system in which the cells are aligned perpendicular to the lumen of the gut.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0005279") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2005279") AnnotationAssertion(rdfs:label "enteric circular muscle") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (distal late tubule) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Portion of the renal tubule which is just posterior to the distal early tubule.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0005292") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2005292") AnnotationAssertion(rdfs:label "distal late tubule") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (axial blood vessel) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0005295") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2005295") AnnotationAssertion(rdfs:label "axial blood vessel") SubClassOf( ) # Class: (pronephric glomerular capsule epithelium) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Simple squamous epithelium that lines the capsule of the pronephric glomerulus.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0005311") AnnotationAssertion(Annotation( "TAO:0005311") "pronephric parietal epithelial layer") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2005311") AnnotationAssertion(rdfs:label "pronephric glomerular capsule epithelium") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (intersegmental lymph vessel) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0005319") AnnotationAssertion(Annotation( "TAO:0005319") "islv") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2005319") AnnotationAssertion(rdfs:label "intersegmental lymph vessel") SubClassOf( ) # Class: (dorsal longitudinal lymphatic vessel) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0005320") AnnotationAssertion(Annotation( "TAO:0005320") "dllv") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2005320") AnnotationAssertion(rdfs:label "dorsal longitudinal lymphatic vessel") SubClassOf( ) # Class: (obsolete gill ionocyte) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Ionocyte located in the gills.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0005324") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2005324") AnnotationAssertion(rdfs:label "obsolete gill ionocyte") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete integument ionocyte) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Ionocyte located in the integument during embryonic and larval stages.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0005325") AnnotationAssertion(Annotation( "TAO:0005325") "skin ionocyte") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "TAO:0005325") "extrabranchial ionocyte") AnnotationAssertion( "UBERON:2005325") AnnotationAssertion(rdfs:label "obsolete integument ionocyte") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete NaK ionocyte) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Integument ionocyte rich in Na,K-ATPase.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0005326") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "TAO:0005326") "NaK-MRC") AnnotationAssertion(Annotation( "TAO:0005326") "NaR cell") AnnotationAssertion( "UBERON:2005326") AnnotationAssertion(rdfs:label "obsolete NaK ionocyte") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete vH ionocyte) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Integument ionocyte rich in vacuolar-type H+ ATPase and carbonic anhydrase.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0005327") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "TAO:0005327") "HR cell") AnnotationAssertion(Annotation( "TAO:0005327") "VH-MRC") AnnotationAssertion( "UBERON:2005327") AnnotationAssertion(rdfs:label "obsolete vH ionocyte") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete presumptive swim bladder) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0005336") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2005336") AnnotationAssertion(rdfs:label "obsolete presumptive swim bladder") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (posterior recess) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Posterior protrusion of the third ventricle.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0005338") AnnotationAssertion(Annotation( "TAO:0005338") "posterior recess of diencephalic ventricle") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2005338") AnnotationAssertion(rdfs:label "posterior recess") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (nucleus of the lateral recess) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0005339") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2005339") AnnotationAssertion(rdfs:label "nucleus of the lateral recess") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (nucleus of the posterior recess) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0005340") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2005340") AnnotationAssertion(rdfs:label "nucleus of the posterior recess") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (medial longitudinal catecholaminergic tract) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0005341") AnnotationAssertion(Annotation( "TAO:0005341") "mlct") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2005341") AnnotationAssertion(rdfs:label "medial longitudinal catecholaminergic tract") SubClassOf( ) # Class: (endohypothalamic tract) AnnotationAssertion(Annotation( "ZFIN:ZDB-PUB-091221-28") "CNS white matter, axonal tract interconnecting catecholaminergic cell groups in the posterior tuberculum and hypothalamus.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0005343") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2005343") AnnotationAssertion(rdfs:label "endohypothalamic tract") SubClassOf( ) # Class: (preopticohypothalamic tract) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0005344") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2005344") AnnotationAssertion(rdfs:label "preopticohypothalamic tract") SubClassOf( ) # Class: (extrapancreatic duct) AnnotationAssertion(Annotation( "ZFIN:ZDB-PUB-050623-3") "Portion of the pancreatic duct, external to the pancreas body that connects the pancreas with the hepatopancreatic ampulla.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0005346") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2005346") AnnotationAssertion(rdfs:label "extrapancreatic duct") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pars superior ear) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "The dorsal part of the ear. Comprises the three semicircular canals, which connect to the utricle.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0005409") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2005409") AnnotationAssertion(rdfs:label "pars superior ear") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pars inferior ear) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "The ventral portion of the ear. It contains the saccule and the laguena which are the primary auditory organs.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0005410") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2005410") AnnotationAssertion(rdfs:label "pars inferior ear") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (common crus) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0005411") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2005411") AnnotationAssertion(rdfs:label "common crus") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (transverse canal) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Duct that crosses the midline connecting the sacculi.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0005412") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2005412") AnnotationAssertion(rdfs:label "transverse canal") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (inner ear foramen) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Foramen in the inner ear.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0005415") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2005415") AnnotationAssertion(rdfs:label "inner ear foramen") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (sacculoagenar foramen) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0005416") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2005416") AnnotationAssertion(rdfs:label "sacculoagenar foramen") SubClassOf( ) # Class: (dorso-rostral cluster) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Early-forming telencephalic neural cluster. Neurons of the dorso-rostral cluster (drc) extend axons to form the supra-optic tract (SOT) and the anterior commissure (AC). Ross et al., 1992.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0007001") AnnotationAssertion(Annotation( "TAO:0007001") "dorsorostral cluster") AnnotationAssertion(Annotation( "TAO:0007001") "drc") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2007001") AnnotationAssertion(rdfs:label "dorso-rostral cluster") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (ventro-rostral cluster) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Early-forming neural cluster located in the rostral diencephalon. At 19 h, axons arising from the vrc grow caudally to pioneer the tract of the postoptic commissure (TPOC). Ross et al., 1992.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0007002") AnnotationAssertion(Annotation( "TAO:0007002") "ventrorostral cluster") AnnotationAssertion(Annotation( "TAO:0007002") "vrc") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2007002") AnnotationAssertion(rdfs:label "ventro-rostral cluster") SubClassOf( ) # Class: (ventro-caudal cluster) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Early-forming neural cluster of the ventral midbrain. At 16 h, axons of the vcc grow caudally to pioneer the medial longitudinal fasciculus (MLF), which is part of the larger ventral longitudinal tract (VLT). Later, neurons from this cluster project axons rostrally into the tract of the post-optic commissure (TPOC). Ross et al., 1992.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0007003") AnnotationAssertion(Annotation( "TAO:0007003") "vcc") AnnotationAssertion(Annotation( "TAO:0007003") "ventrocaudal cluster") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2007003") AnnotationAssertion(rdfs:label "ventro-caudal cluster") SubClassOf( ) # Class: (epiphysial cluster) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Early-developing neuronal cluster of the epiphysis. By 24 hpf the pioneer axon of the dorsoventral diencephalic tract (DVDT) has arisen from the ec and grown ventrally. As this axon encounters axons of the TPOC, it makes a near-90 rostral turn and grows rostrally among axons of the TPOC growing in the opposite direction. Ross et al., 1992.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0007004") AnnotationAssertion(Annotation( "TAO:0007004") "ec") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2007004") AnnotationAssertion(rdfs:label "epiphysial cluster") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (ventral intermandibularis anterior) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0007008") AnnotationAssertion(Annotation( "TAO:0007008") Annotation( ) "ventral intermandibulari anterior") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2007008") AnnotationAssertion(rdfs:label "ventral intermandibularis anterior") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete eminentia thalami) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Part of the forebrain that is ventral to the ventral thalamus and dorsal to the preoptic area. See page 44 of the Atlas of Early Zebrafish Brain Development.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0007010") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2007010") AnnotationAssertion(rdfs:label "obsolete eminentia thalami") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete vagal root) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Part of cranial nerve X.") AnnotationAssertion( "UBERON:0011213") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0007011") AnnotationAssertion(Annotation( "TAO:0007011") "rX") AnnotationAssertion(Annotation( "TAO:0007011") "vagus root") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2007011") AnnotationAssertion(rdfs:label "obsolete vagal root") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (lateral forebrain bundle) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0007012") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2007012") AnnotationAssertion(rdfs:label "lateral forebrain bundle") SubClassOf( ) # Class: (preplacodal ectoderm) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Non neural ectoderm that surrounds the presumptive neural plate and gives rise to neurogenic placodes.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0007013") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2007013") AnnotationAssertion(rdfs:label "preplacodal ectoderm") SubClassOf( ) # Class: (anterior presumptive neural plate) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0007014") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2007014") AnnotationAssertion(rdfs:label "anterior presumptive neural plate") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (posterior presumptive neural plate) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0007015") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2007015") AnnotationAssertion(rdfs:label "posterior presumptive neural plate") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (posterior neural keel) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0007023") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2007023") AnnotationAssertion(rdfs:label "posterior neural keel") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (anterior neural keel) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0007024") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2007024") AnnotationAssertion(rdfs:label "anterior neural keel") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (midbrain neural keel) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0007025") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2007025") AnnotationAssertion(rdfs:label "midbrain neural keel") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (forebrain neural keel) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0007026") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2007026") AnnotationAssertion(rdfs:label "forebrain neural keel") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (forebrain midbrain boundary neural keel) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0007027") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2007027") AnnotationAssertion(rdfs:label "forebrain midbrain boundary neural keel") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (spinal cord neural keel) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0007028") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2007028") AnnotationAssertion(rdfs:label "spinal cord neural keel") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (hindbrain neural keel) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0007029") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2007029") AnnotationAssertion(rdfs:label "hindbrain neural keel") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (posterior neural rod) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0007030") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2007030") AnnotationAssertion(rdfs:label "posterior neural rod") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (anterior neural rod) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0007031") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2007031") AnnotationAssertion(rdfs:label "anterior neural rod") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (midbrain neural rod) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0007032") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2007032") AnnotationAssertion(rdfs:label "midbrain neural rod") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (forebrain midbrain boundary neural rod) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0007033") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2007033") AnnotationAssertion(rdfs:label "forebrain midbrain boundary neural rod") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (forebrain neural rod) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0007034") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2007034") AnnotationAssertion(rdfs:label "forebrain neural rod") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (spinal cord neural rod) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0007035") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2007035") AnnotationAssertion(rdfs:label "spinal cord neural rod") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (hindbrain neural rod) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0007036") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2007036") AnnotationAssertion(rdfs:label "hindbrain neural rod") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (forebrain midbrain boundary neural tube) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0007040") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2007040") AnnotationAssertion(rdfs:label "forebrain midbrain boundary neural tube") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (forebrain neural tube) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0007041") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2007041") AnnotationAssertion(rdfs:label "forebrain neural tube") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (spinal cord neural tube) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0007042") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2007042") AnnotationAssertion(rdfs:label "spinal cord neural tube") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (hindbrain neural tube) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0007043") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2007043") AnnotationAssertion(rdfs:label "hindbrain neural tube") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (midbrain hindbrain boundary neural keel) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0007045") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2007045") AnnotationAssertion(rdfs:label "midbrain hindbrain boundary neural keel") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (midbrain hindbrain boundary neural rod) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0007046") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2007046") AnnotationAssertion(rdfs:label "midbrain hindbrain boundary neural rod") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (midbrain hindbrain boundary neural tube) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0007047") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2007047") AnnotationAssertion(rdfs:label "midbrain hindbrain boundary neural tube") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (ventral intermandibularis posterior) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0007048") AnnotationAssertion(Annotation( "TAO:0007048") Annotation( ) "ventral intermandibulari posterior") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2007048") AnnotationAssertion(rdfs:label "ventral intermandibularis posterior") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (constrictor dorsalis) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0007050") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2007050") AnnotationAssertion(rdfs:label "constrictor dorsalis") SubClassOf( ) # Class: (ventral interhyoideus) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0007051") AnnotationAssertion(Annotation( "TAO:0007051") Annotation( ) "ventral interhyoidei") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2007051") AnnotationAssertion(rdfs:label "ventral interhyoideus") SubClassOf( ) # Class: (hyohyoideus) AnnotationAssertion(Annotation( "ZFIN:ZDB-PUB-020703-2") "Is a hyoid muscle that inserts at the most anterior basibranchial and also at the posterior ends of the ceratohyals and functions in jaw closure.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0007052") AnnotationAssertion(Annotation( "TAO:0007052") Annotation( ) "hyohyoidei") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2007052") AnnotationAssertion(rdfs:label "hyohyoideus") SubClassOf( ) # Class: (dorsal adductor hyomandibulae) AnnotationAssertion(Annotation( "ZFIN:ZDB-PUB-020703-2") "Is a hyoid muscle that attaches to the dorsomedial faces of the hyosymplectics.") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0007053") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2007053") AnnotationAssertion(rdfs:label "dorsal adductor hyomandibulae") SubClassOf( ) # Class: (pillar of the anterior semicircular canal) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0007054") AnnotationAssertion(Annotation( "TAO:0007054") "anterior hub of the semicircular canal") AnnotationAssertion(Annotation( "TAO:0007054") "anterior pillar") AnnotationAssertion(Annotation( "TAO:0007054") "anterior pillar of the semicircular canal") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "TAO:0007054") "horizontal hub") AnnotationAssertion( "UBERON:2007054") AnnotationAssertion(rdfs:label "pillar of the anterior semicircular canal") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (neurogenic field) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0007059") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2007059") AnnotationAssertion(rdfs:label "neurogenic field") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (dorsolateral field) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0007060") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2007060") AnnotationAssertion(rdfs:label "dorsolateral field") SubClassOf( ) # Class: (epibranchial field) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0007061") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2007061") AnnotationAssertion(rdfs:label "epibranchial field") SubClassOf( ) # Class: (olfactory field) AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0007062") AnnotationAssertion(Annotation( "TAO:0007062") Annotation( ) "olfactory fields") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2007062") AnnotationAssertion(rdfs:label "olfactory field") SubClassOf( ) # Class: (obsolete vagal ganglion) AnnotationAssertion( "UBERON:0005362") AnnotationAssertion( "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "teleost_anatomy_curators") AnnotationAssertion( "ZFA:0007067") AnnotationAssertion(Annotation( "TAO:0007067") "gX") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2007067") AnnotationAssertion(rdfs:label "obsolete vagal ganglion") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (basipterygium element) AnnotationAssertion(Annotation( "TAO:wd"^^xsd:string) "Endochondral element that is paired and supports the pelvic fin. The basipterygium has a posteromedial process called the ischiac process (Wietzman 1962).") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "TAO:0000623") Annotation( ) "basipterygia") AnnotationAssertion( "basipterygium") AnnotationAssertion(Annotation( "PSPUB:0000145") "basiptrygium ischiatique") AnnotationAssertion(Annotation( "PSPUB:0000164"^^xsd:string) "os pelvien") AnnotationAssertion(Annotation( "TAO:0000623") "pelvic bone") AnnotationAssertion( "pelvic plate") AnnotationAssertion( "pubic plate") AnnotationAssertion( "UBERON:2100623") AnnotationAssertion(rdfs:label "basipterygium element") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) # Class: (obsolete pelvic fin radial cartilage) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "Pelvic fin radial element that is composed of cartilage tissue.") AnnotationAssertion(Annotation( "TAO:0000508") "pelvic actinost") AnnotationAssertion(Annotation( "TAO:0000508") "pelvic radial") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:2200508") AnnotationAssertion(rdfs:label "obsolete pelvic fin radial cartilage") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete basipterygium cartilage) AnnotationAssertion(Annotation( "OBOL:automatic"^^xsd:string) "Basipterygium element that is composed of cartilage tissue.") AnnotationAssertion(Annotation( "TAO:0000623") Annotation( ) "basipterygia") AnnotationAssertion(Annotation( "PSPUB:0000145") "basiptrygium ischiatique") AnnotationAssertion(Annotation( "PSPUB:0000164"^^xsd:string) "os pelvien") AnnotationAssertion( "pelvic plate") AnnotationAssertion( "pubic plate") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "TAO:0000623") "pelvic cartilage") AnnotationAssertion( "UBERON:2200623") AnnotationAssertion(rdfs:label "obsolete basipterygium cartilage") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (alary cartilage) AnnotationAssertion(Annotation( "AAO:LAP") "Paired, cup-shaped cartilage that are dorsal to the septomaxillae and anterior to the oblique cartilage. The anterior, convex face of each alary cartilage is synchondrotically fused to the superior prenasal cartilage and the ventral edge is fused to the superior margin of the crista intermedia.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "UBERON:3000002") "alinasal cartilage") AnnotationAssertion(Annotation( "UBERON:3000002") "cartilago alaris") AnnotationAssertion(Annotation( "UBERON:3000002") "cartilago alaris nasi") AnnotationAssertion(Annotation( "UBERON:3000002") "cartilago cupullaris") AnnotationAssertion(Annotation( "UBERON:3000002") "copula anterior") AnnotationAssertion(Annotation( "UBERON:3000002") "naseflngelknorpel") AnnotationAssertion(Annotation( "UBERON:3000002") "processus alaris") AnnotationAssertion(Annotation( "UBERON:3000002") "second upper labial") AnnotationAssertion( "UBERON:3000002") AnnotationAssertion(rdfs:label "alary cartilage") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (alary process of premaxilla) AnnotationAssertion(Annotation( "AAO:LAP") "Dorsal process that extends toward the nasal bone. The posterior (inner) face of each alary process is concave and is invested dorsomedially by the superior prenasal cartilage and ventromedially by the inferior prenasal cartilage.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "UBERON:3000003") "dorsal process of premaxilla") AnnotationAssertion(Annotation( "UBERON:3000003") "pars dorsalis of premaxilla") AnnotationAssertion(Annotation( "UBERON:3000003") "pars facialis of premaxilla") AnnotationAssertion(Annotation( "UBERON:3000003") "pars frontalis of premaxilla") AnnotationAssertion(Annotation( "UBERON:3000003") "pars prenasalis of premaxilla") AnnotationAssertion(Annotation( "UBERON:3000003") "premaxillary spine") AnnotationAssertion(Annotation( "UBERON:3000003") "processus ascendens of premaxilla") AnnotationAssertion(Annotation( "UBERON:3000003") "processus frontalis of premaxilla") AnnotationAssertion(Annotation( "UBERON:3000003") "processus nasalis of premaxilla") AnnotationAssertion( "UBERON:3000003") AnnotationAssertion(rdfs:label "alary process of premaxilla") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (alveolar foramen) AnnotationAssertion(Annotation( "AAO:LAP") "Foramen for the R. alveolaris of Nerve VII and the alveolar artery.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "UBERON:3000006") "inferior dental foramen") AnnotationAssertion( "UBERON:3000006") AnnotationAssertion(rdfs:label "alveolar foramen") SubClassOf( ) # Class: (angulosplenial coronoid process) AnnotationAssertion(Annotation( "AAO:LAP") "Point of insertion of the adductor mandibulae musculature.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000012") AnnotationAssertion(rdfs:label "angulosplenial coronoid process") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (anterior maxillary process) AnnotationAssertion(Annotation( "AAO:LAP") "Process that extends anteriorly from the planum triangulare and invests the medial face of the pars facialis of the maxilla.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000015") AnnotationAssertion(rdfs:label "anterior maxillary process") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (anterior nasal wall) AnnotationAssertion(Annotation( "AAO:LAP") "Paired, vertical, and relatively straight plates that form the anterior limit of the nasal capsule.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "UBERON:3000016") "prenasal wall") AnnotationAssertion(Annotation( "UBERON:3000016") "solum anterius") AnnotationAssertion( "UBERON:3000016") AnnotationAssertion(rdfs:label "anterior nasal wall") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (anterior process of pars palatina of maxilla) AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000017") AnnotationAssertion(rdfs:label "anterior process of pars palatina of maxilla") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (anterolateral process of frontoparietal) AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000020") AnnotationAssertion(rdfs:label "anterolateral process of frontoparietal") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (antorbital process) AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000022") AnnotationAssertion(rdfs:label "antorbital process") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (auditory muscles) AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000032") AnnotationAssertion(rdfs:label "auditory muscles") SubClassOf( ) # Class: (basicranial fenestra) AnnotationAssertion(Annotation( "AAO:LAP") "Ventral opening of the neurocranium.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000037") AnnotationAssertion(rdfs:label "basicranial fenestra") SubClassOf( ) # Class: (basimandibulare) AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000038") AnnotationAssertion(rdfs:label "basimandibulare") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (Bidder's organ) AnnotationAssertion(Annotation( "AAO:BJB"^^xsd:string) "Anatomical structure which forms from an enlargement of the anterior portion of each gonad in all male bufonid larvae and consists of ovarian tissues.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000041") AnnotationAssertion(rdfs:label "Bidder's organ") SubClassOf( ) SubClassOf( ) # Class: (obsolete blastomere) AnnotationAssertion(Annotation( "AAO:BJB"^^xsd:string) "Undifferentiated cell that is produced by early cleavages of the fertilized egg (zygote).") AnnotationAssertion( "UBERON:2000093") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "UBERON:3010282") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000044") AnnotationAssertion(rdfs:label "obsolete blastomere") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (braincase and auditory apparatus) AnnotationAssertion(Annotation( "AAO:LAP") "The part of the skull that encloses the brain and surrounds the inner ear.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000050") AnnotationAssertion(rdfs:label "braincase and auditory apparatus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (braincase and otic capsule opening) AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000051") AnnotationAssertion(rdfs:label "braincase and otic capsule opening") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (braincase and otic capsule skeleton) AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000052") AnnotationAssertion(rdfs:label "braincase and otic capsule skeleton") SubClassOf( ) # Class: (canalis semicircularis anterior) AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000057") AnnotationAssertion(rdfs:label "canalis semicircularis anterior") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (capsular process) AnnotationAssertion(Annotation( "AAO:LAP") "Narrow process of the skeletal support that projects forward.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000059") AnnotationAssertion(rdfs:label "capsular process") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete cartilage bridge of nasal skeleton) AnnotationAssertion( "UBERON:3000381") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000061") AnnotationAssertion(rdfs:label "obsolete cartilage bridge of nasal skeleton") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete forelimb opening) AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000065") AnnotationAssertion(rdfs:label "obsolete forelimb opening") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (cartilago ectochoanalis) AnnotationAssertion(Annotation( "AAO:LAP") "Lateral cartilaginous border of the fenestra endochoanalis.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000068") AnnotationAssertion(rdfs:label "cartilago ectochoanalis") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (cartilago infranarina) AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000069") AnnotationAssertion(rdfs:label "cartilago infranarina") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (cartilago orbitalis) AnnotationAssertion(Annotation( "AAO:LT") "Lateral wall of chondrocranial braincase between lamina orbitonasalis and pila metoptica.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "UBERON:3000074") "dorsale randspange") AnnotationAssertion( "UBERON:3000074") AnnotationAssertion(rdfs:label "cartilago orbitalis") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (cartilago prootico-occipitalis) AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000078") AnnotationAssertion(rdfs:label "cartilago prootico-occipitalis") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (cartilago retronarina) AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000079") AnnotationAssertion(rdfs:label "cartilago retronarina") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (cavum inferius) AnnotationAssertion(Annotation( "AAO:LAP") "Accessory cavity located ventral to the cavum principale and cavum medius.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000085") AnnotationAssertion(rdfs:label "cavum inferius") SubClassOf( ) # Class: (cavum internasale) AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000086") AnnotationAssertion(rdfs:label "cavum internasale") SubClassOf( ) # Class: (cavum medius) AnnotationAssertion(Annotation( "AAO:LAP") "Small accessory cavity located between the cavum principale and cavum inferius.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000087") AnnotationAssertion(rdfs:label "cavum medius") SubClassOf( ) # Class: (cavum praenasale) AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000088") AnnotationAssertion(rdfs:label "cavum praenasale") SubClassOf( ) # Class: (cavum principale) AnnotationAssertion(Annotation( "AAO:LAP") Annotation(rdfs:comment "AAO:EJS") "The largest part of the nasal cavity, containing the olfactory epithelium.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000089") AnnotationAssertion(rdfs:label "cavum principale") SubClassOf( ) # Class: (obsolete connective tissue proper) AnnotationAssertion( "UBERON:0002384") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000099") AnnotationAssertion(rdfs:label "obsolete connective tissue proper") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (hyale) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "Anterior-lateral projections from the corpus of the hyoid apparatus.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "anterior cornua") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000101") AnnotationAssertion(rdfs:comment "Found in Anura (frogs) only.") AnnotationAssertion(rdfs:label "hyale") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (crista contacta) AnnotationAssertion(Annotation( "AAO:LAP") "Thin, horizontal ridge that extends medially from the corpus of the septomaxilla; it lays on the lamina inferior.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000110") AnnotationAssertion(rdfs:label "crista contacta") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (crista dentalis of maxilla) AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000111") AnnotationAssertion(rdfs:label "crista dentalis of maxilla") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (crista dentalis of premaxilla) AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "UBERON:3000112") "dental ridge of premaxilla") AnnotationAssertion( "UBERON:3000112") AnnotationAssertion(rdfs:label "crista dentalis of premaxilla") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (crista intermedia) AnnotationAssertion(Annotation( "AAO:LAP") "Paired, oblique plates of cartilage located ventral to the alary cartilages. The dorsomedial margin of each crista intermedia is fused to the transitional zone between the septum nasi and the tectum nasi, whereas the ventrolateral margin bears two laminae, the lamina superior and the lamina inferior.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000113") AnnotationAssertion(rdfs:label "crista intermedia") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (crista lateralis of premaxilla) AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000115") AnnotationAssertion(rdfs:label "crista lateralis of premaxilla") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (crista subnasalis) AnnotationAssertion(Annotation( "AAO:LAP") "Ventral crest of the paries nasi.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "UBERON:3000117") "subnasal crest") AnnotationAssertion( "UBERON:3000117") AnnotationAssertion(rdfs:label "crista subnasalis") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (crista supraorbitalis) AnnotationAssertion(Annotation( "AAO:LAP") "Short and blunt process that extends posteriorly from the posteromedial margin of the postnasal wall, on the anterodorsal corner of the orbit above the medial orbitonasal foramen.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000118") AnnotationAssertion(rdfs:label "crista supraorbitalis") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete dense connective tissue) AnnotationAssertion(Annotation( "AAO:LAP") "Also known as fibrous connective tissue. Forms ligaments and tendons and is characterized by densely packed collagen fibers that have great tensile strength.") AnnotationAssertion( "UBERON:0011823") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000121") AnnotationAssertion(rdfs:label "obsolete dense connective tissue") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete dorsal plate) AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000132") AnnotationAssertion(rdfs:comment "Term describes shape of tectum nasi") AnnotationAssertion(rdfs:label "obsolete dorsal plate") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (endolymphatic system) AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000141") AnnotationAssertion(rdfs:label "endolymphatic system") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (extremitas anterior) AnnotationAssertion(Annotation( "AAO:LAP") "Large anterior outgrowth of the septomaxilla that is directed into the space between the alary cartilage and the lamina inferior.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "UBERON:3000155") "anterior ramus") AnnotationAssertion( "UBERON:3000155") AnnotationAssertion(rdfs:label "extremitas anterior") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (fenestra dorsalis nasi) AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000160") AnnotationAssertion(rdfs:label "fenestra dorsalis nasi") SubClassOf( ) # Class: (fenestra endochoanalis) AnnotationAssertion(Annotation( "AAO:LAP") "Opening on the ventral aspect of the nasal capsule. It contains the apertura nasalis interna.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "UBERON:3000161") "fenestra exochoanalis") AnnotationAssertion( "UBERON:3000161") AnnotationAssertion(rdfs:label "fenestra endochoanalis") SubClassOf( ) # Class: (fenestra endonarina communis) AnnotationAssertion(Annotation( "AAO:LAP") "Opening on the anterolateral aspect of the nasal capsule. It contains the apertura nasalis externa.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "UBERON:3000162") "apertura nasalis externa") AnnotationAssertion(Annotation( "UBERON:3000162") "fenestra narina") AnnotationAssertion(Annotation( "UBERON:3000162") "narial fenestra") AnnotationAssertion( "UBERON:3000162") AnnotationAssertion(rdfs:label "fenestra endonarina communis") SubClassOf( ) # Class: (fenestra lateralis nasi) AnnotationAssertion(Annotation( "AAO:LAP") "Opening on the lateral side of the nasal capsule.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "UBERON:3000164") "fenestra infraconchalis") AnnotationAssertion(Annotation( "UBERON:3000164") "fenestra retronarina") AnnotationAssertion( "UBERON:3000164") AnnotationAssertion(rdfs:label "fenestra lateralis nasi") SubClassOf( ) # Class: (fenestra nasobasalis) AnnotationAssertion(Annotation( "AAO:LAP") "Small opening at the anterior tip of the nasal capsule, on the floor of the cavum inferius. It is located medially to the base of the inferior prenasal cartilage and serves for the passage of the ramus medialis narium and arteria orbitonasalis.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "UBERON:3000166") "basal fenestra") AnnotationAssertion(Annotation( "UBERON:3000166") "fenestra basalis nasi") AnnotationAssertion(Annotation( "UBERON:3000166") "foramen apicale") AnnotationAssertion(Annotation( "UBERON:3000166") "foramen epiphaniale") AnnotationAssertion(Annotation( "UBERON:3000166") "nasobasal fenestra") AnnotationAssertion( "UBERON:3000166") AnnotationAssertion(rdfs:label "fenestra nasobasalis") SubClassOf( ) # Class: (fenestra nasolateralis) AnnotationAssertion(Annotation( "AAO:LAP") "Elongated opening located on the lateral side of the nasal capsule.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000167") AnnotationAssertion(rdfs:label "fenestra nasolateralis") SubClassOf( ) # Class: (fenestra precerebralis) AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000170") AnnotationAssertion(rdfs:label "fenestra precerebralis") SubClassOf( ) # Class: (fenestra prechoanalis) AnnotationAssertion(Annotation( "AAO:LAP") "Large opening of the nasal floor anterior to the fenestra endochoanalis.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000171") AnnotationAssertion(rdfs:label "fenestra prechoanalis") SubClassOf( ) # Class: (footplate of pars media plectri) AnnotationAssertion(Annotation( "AAO:LAP") "Independent, horizontal bar of cartilage located on the anterior part of the fenestra ovalis in front of the pars interna plectri.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "UBERON:3000178") "fenestral plate") AnnotationAssertion(Annotation( "UBERON:3000178") "interstapediale") AnnotationAssertion(Annotation( "UBERON:3000178") "otostapes") AnnotationAssertion(Annotation( "UBERON:3000178") "pars otica columellae") AnnotationAssertion(Annotation( "UBERON:3000178") "pseudooperculum") AnnotationAssertion( "UBERON:3000178") AnnotationAssertion(rdfs:label "footplate of pars media plectri") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (foramen acusticum) AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "UBERON:3000179") "acoustic foramen") AnnotationAssertion( "UBERON:3000179") AnnotationAssertion(rdfs:label "foramen acusticum") SubClassOf( ) # Class: (foramen acusticum anterius) AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000180") AnnotationAssertion(rdfs:label "foramen acusticum anterius") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (foramen acusticum maius) AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000181") AnnotationAssertion(rdfs:label "foramen acusticum maius") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (foramen acusticum minus) AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000182") AnnotationAssertion(rdfs:label "foramen acusticum minus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (foramen acusticum posterius) AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000183") AnnotationAssertion(rdfs:label "foramen acusticum posterius") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (foramen endolymphaticum) AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "UBERON:3000185") "endolymphatic foramen") AnnotationAssertion( "UBERON:3000185") AnnotationAssertion(rdfs:label "foramen endolymphaticum") SubClassOf( ) # Class: (foramen orbitonasale laterale) AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000189") AnnotationAssertion(rdfs:label "foramen orbitonasale laterale") SubClassOf( ) # Class: (foramen orbitonasale mediale) AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "UBERON:3000190") "canalis orbitonasalis") AnnotationAssertion(Annotation( "UBERON:3000190") "canalis orbitonasalis medialis") AnnotationAssertion(Annotation( "UBERON:3000190") "foramen orbitonasale") AnnotationAssertion( "UBERON:3000190") AnnotationAssertion(rdfs:label "foramen orbitonasale mediale") SubClassOf( ) # Class: (foramen perilymphaticum) AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000192") AnnotationAssertion(rdfs:label "foramen perilymphaticum") SubClassOf( ) # Class: (foramen perilymphaticum accessorium) AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000193") AnnotationAssertion(rdfs:label "foramen perilymphaticum accessorium") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (foramen perilymphaticus inferius) AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "UBERON:3000195") "foramen pro aquaeducto cochleae") AnnotationAssertion(Annotation( "UBERON:3000195") "inferior perilymphatic foramen") AnnotationAssertion( "UBERON:3000195") AnnotationAssertion(rdfs:label "foramen perilymphaticus inferius") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete frontoparietal constriction) AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000208") AnnotationAssertion(rdfs:label "obsolete frontoparietal constriction") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (frontoparietal fontanelle) AnnotationAssertion(Annotation( "AAO:LAP") "Dorsal opening of the neurocranium.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000209") AnnotationAssertion(rdfs:label "frontoparietal fontanelle") SubClassOf( ) # Class: (hyobranchial muscle) AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000224") AnnotationAssertion(rdfs:label "hyobranchial muscle") SubClassOf( ) # Class: (hyolaryngeal complex) AnnotationAssertion(Annotation( "AAO:LAP") "Complex formed by two units, the hyoid and laryngeal apparatuses, which are both derived from the larval hyobranchial skeleton.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000226") AnnotationAssertion(rdfs:label "hyolaryngeal complex") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (inferior prenasal cartilage) AnnotationAssertion(Annotation( "AAO:LAP") "Elongate cartilage that extends anteroventrally from the solum nasi to abut the ventral portion of the posterior aspect of the alary process of the premaxilla. It was first described by Wiedersheim in 1876.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "UBERON:3000234") "inferior prenasal process") AnnotationAssertion(Annotation( "UBERON:3000234") "processus prenasalis inferior") AnnotationAssertion(Annotation( "UBERON:3000234") "processus prenasalis inferior lateralis") AnnotationAssertion( "UBERON:3000234") AnnotationAssertion(rdfs:label "inferior prenasal cartilage") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (infrarostral cartilage) AnnotationAssertion(Annotation( "AAO:EJS"^^xsd:string) "Larval lower jaw lies anterior to Meckels cartilage.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "UBERON:3000237") "infralabial cartilage") AnnotationAssertion(Annotation( "UBERON:3000237") "mentomeckelian cartilage") AnnotationAssertion( "UBERON:3000237") AnnotationAssertion(rdfs:label "infrarostral cartilage") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lamella alaris) AnnotationAssertion(Annotation( "AAO:LAP") "Dorsal plate of the squamosal.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "UBERON:3000254") "horizontal arm of squamosal") AnnotationAssertion( "UBERON:3000254") AnnotationAssertion(rdfs:label "lamella alaris") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lamina anterior of pars facialis) AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000255") AnnotationAssertion(rdfs:label "lamina anterior of pars facialis") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lamina inferior) AnnotationAssertion(Annotation( "AAO:LAP") "Lateral expansion of the crista intermedia that serves as the floor of the cavum medium.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "UBERON:3000259") "lamina inferior cristae intermediae") AnnotationAssertion( "UBERON:3000259") AnnotationAssertion(rdfs:label "lamina inferior") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lamina nariochoanalis) AnnotationAssertion(Annotation( "AAO:LAP") "Free, dorsal margin of the lamina inferior.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000260") AnnotationAssertion(rdfs:label "lamina nariochoanalis") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lamina precerebralis) AnnotationAssertion(Annotation( "AAO:LAP") "Posterior face of septum nasi.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000263") AnnotationAssertion(rdfs:label "lamina precerebralis") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lamina superior) AnnotationAssertion(Annotation( "AAO:LAP") "Lateral expansion of the crista intermedia that serves as the roof of the cavum medium.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "UBERON:3000264") "lamina superior cristae intermediae") AnnotationAssertion( "UBERON:3000264") AnnotationAssertion(rdfs:label "lamina superior") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete larval structure) AnnotationAssertion(Annotation( "AAO:EJS"^^xsd:string) "Anatomical structure that is part of the larva.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000265") AnnotationAssertion(rdfs:comment "Obsolete term in XAO. redundant with stage+skeletal system. Can be properly reinstated if needed.") AnnotationAssertion(rdfs:label "obsolete larval structure") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (margo orbitalis of maxilla) AnnotationAssertion(Annotation( "AAO:LAP") "Dorsal margin of the maxilla between the frontal and zygomatico-maxillary processes.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000281") AnnotationAssertion(rdfs:label "margo orbitalis of maxilla") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (margo orbitalis of squamosal) AnnotationAssertion(Annotation( "AAO:LAP") "Anterior margin of the squamosal that takes part in the formation of the orbit.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000283") AnnotationAssertion(rdfs:label "margo orbitalis of squamosal") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (maxillopalatine) AnnotationAssertion(Annotation( "AAO:EJS"^^xsd:string) "A compound bone consisting of maxilla and palatine, can also contain a prefrontal and/or lacrimal; present in adult Gymnophiona.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000288") AnnotationAssertion(rdfs:label "maxillopalatine") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (medial inferior prenasal cartilage) AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000290") AnnotationAssertion(rdfs:label "medial inferior prenasal cartilage") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (medial orbitonasal foramen) AnnotationAssertion(Annotation( "AAO:LAP") "Opening on the postnasal wall for the medial branch (= ramus medialis nasi) of the ophthalmicus nerve.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000291") AnnotationAssertion(rdfs:label "medial orbitonasal foramen") SubClassOf( ) # Class: (median prenasal process) AnnotationAssertion(Annotation( "AAO:LAP") "Anterior projection of the septum nasi that protrudes through the anterior nasal wall.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "UBERON:3000294") "processus prenasalis medius") AnnotationAssertion( "UBERON:3000294") AnnotationAssertion(rdfs:label "median prenasal process") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (median symphysis) AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000295") AnnotationAssertion(rdfs:label "median symphysis") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (narial muscles) AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000309") AnnotationAssertion(rdfs:label "narial muscles") SubClassOf( ) # Class: (nasal opening) AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000316") AnnotationAssertion(rdfs:label "nasal opening") SubClassOf( ) # Class: (nasopremaxilla) AnnotationAssertion(Annotation( "AAO:EJS"^^xsd:string) "A compound bone consisting of premaxilla, nasal and sometimes septomaxilla in adult members of Caeciliidae and Typhlonectidae.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000323") AnnotationAssertion(rdfs:label "nasopremaxilla") SubClassOf( ) SubClassOf( ) # Class: (oblique cartilage) AnnotationAssertion(Annotation( "AAO:LAP") "Semi-circular cartilaginous sheet that lies lateral to the side of the septum nasi.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "UBERON:3000329") "cartilago obliqua") AnnotationAssertion(Annotation( "UBERON:3000329") "cartilago obliqua nasi") AnnotationAssertion(Annotation( "UBERON:3000329") "cartilago obliquo") AnnotationAssertion(Annotation( "UBERON:3000329") "dorsal process") AnnotationAssertion(Annotation( "UBERON:3000329") "lamina obliqua") AnnotationAssertion( "UBERON:3000329") AnnotationAssertion(rdfs:label "oblique cartilage") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (oculomotor foramen) AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "nerve foramen III") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000332") AnnotationAssertion(rdfs:label "oculomotor foramen") SubClassOf( ) # Class: (olfactory foramen) AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000333") AnnotationAssertion(rdfs:label "olfactory foramen") SubClassOf( ) # Class: (optic fenestra) AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000341") AnnotationAssertion(rdfs:label "optic fenestra") SubClassOf( ) # Class: (orbitonasal foramen) AnnotationAssertion(Annotation( "AAO:LAP") "Foramen that forms a passage for one of the branches of the trigeminal nerve into the nasal region.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000344") AnnotationAssertion(rdfs:label "orbitonasal foramen") SubClassOf( ) # Class: (obsolete os articulare) AnnotationAssertion(Annotation( "AAO:LAP") "Ossified posterior articular portion of Meckel's cartilage.") AnnotationAssertion( "UBERON:2001805") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000347") AnnotationAssertion(rdfs:label "obsolete os articulare") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (os basale) AnnotationAssertion(Annotation( "UBERON:cjm"^^xsd:string) "A bone that forms both the floor of the braincase and the posterior part of the skull.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000348") AnnotationAssertion(rdfs:label "os basale") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete other muscles) AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000362") AnnotationAssertion(rdfs:label "obsolete other muscles") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (otic ramus of squamosal) AnnotationAssertion(Annotation( "AAO:LAP") "Ramus (process) that extends medially toward the otic capsule.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "UBERON:3000367") "posterior ramus") AnnotationAssertion(Annotation( "UBERON:3000367") "ramus paroticus") AnnotationAssertion( "UBERON:3000367") AnnotationAssertion(rdfs:label "otic ramus of squamosal") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (otoccipital) AnnotationAssertion(Annotation( "AAO:LAP") "Fused prootic and exoccipital bones.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000368") AnnotationAssertion(rdfs:label "otoccipital") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete palatine) AnnotationAssertion(Annotation( "AAO:LAP") "Sliver of bone that invest part of or all the posterior aspect of each antorbital plane.") AnnotationAssertion( "UBERON:0001682") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion(Annotation( "UBERON:3000372") "neopalatine") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000372") AnnotationAssertion(rdfs:label "obsolete palatine") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete palatine process of pars palatina of premaxilla) AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "UBERON:3000374") "median palatal squame") AnnotationAssertion( "UBERON:3000374") AnnotationAssertion(rdfs:label "obsolete palatine process of pars palatina of premaxilla") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (palatine process of the pars facialis of the maxilla) AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000375") AnnotationAssertion(rdfs:label "palatine process of the pars facialis of the maxilla") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete palatine tooth) AnnotationAssertion( "UBERON:0012073") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon. Logical definition added by cjm.") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "UBERON:3000376") "palatine teeth") AnnotationAssertion( "UBERON:3000376") AnnotationAssertion(rdfs:label "obsolete palatine tooth") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (paranasal commissure) AnnotationAssertion(Annotation( "AAO:LAP") "Cartilaginous bridge that extends posteriorly to the anterolateral corner of the posterior nasal wall.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "UBERON:3000381") "commissura lateralis nasi") AnnotationAssertion(Annotation( "UBERON:3000381") "connection between lamina nariochoanalis and postnasal wall") AnnotationAssertion(Annotation( "UBERON:3000381") "processus lingularis") AnnotationAssertion( "UBERON:3000381") AnnotationAssertion(rdfs:label "paranasal commissure") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (parasagittal crest) AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000384") AnnotationAssertion(rdfs:label "parasagittal crest") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (cultriform process) AnnotationAssertion(Annotation( "AAO:LAP") "Process that extends anteriorly from the orbitotemporal region.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "UBERON:3000386") "pars medialis") AnnotationAssertion(Annotation( "UBERON:3000386") "rostrum") AnnotationAssertion( "UBERON:3000386") AnnotationAssertion(rdfs:label "cultriform process") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (subotic alae) AnnotationAssertion(Annotation( "AAO:LAP") "Paired processes extending lateraly from the posterior body of the parasphenoid that, when present, support the otic capsules ventrally.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "UBERON:3000387") "processus lateralis") AnnotationAssertion( "UBERON:3000387") AnnotationAssertion(rdfs:label "subotic alae") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (parasphenoid tooth) AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "UBERON:3000388") "parasphenoid teeth") AnnotationAssertion( "UBERON:3000388") AnnotationAssertion(rdfs:label "parasphenoid tooth") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (paries nasi) AnnotationAssertion(Annotation( "AAO:LAP") "Paired, elongate, ventrolaterally-orieted cartilaginous structures that extend to the premaxilla-maxilla articulation.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000389") AnnotationAssertion(rdfs:label "paries nasi") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pars amphibiorum) AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000393") AnnotationAssertion(rdfs:label "pars amphibiorum") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pars articularis of mandibular arch) AnnotationAssertion(Annotation( "AAO:LAP") "Posterior end of Meckel's cartilage that forms the articular head of the mandibular arch.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000394") AnnotationAssertion(rdfs:label "pars articularis of mandibular arch") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pars basilaris) AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000395") AnnotationAssertion(rdfs:label "pars basilaris") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete pars dentalis of maxilla) AnnotationAssertion(Annotation( "AAO:LAP") "Tooth-bearing part of the maxilla.") AnnotationAssertion( "UBERON:0004527") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "UBERON:3000396") "crista dentalis") AnnotationAssertion( "UBERON:3000396") AnnotationAssertion(rdfs:label "obsolete pars dentalis of maxilla") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete pars dentalis of premaxilla) AnnotationAssertion(Annotation( "AAO:LAP") "Tooth-bearing part of the premaxilla.") AnnotationAssertion( "UBERON:0034898") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000397") AnnotationAssertion(rdfs:label "obsolete pars dentalis of premaxilla") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (pars externa plectri) AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "UBERON:3000399") "extracolumellare") AnnotationAssertion(Annotation( "UBERON:3000399") "extrapediale") AnnotationAssertion(Annotation( "UBERON:3000399") "extraplectral") AnnotationAssertion(Annotation( "UBERON:3000399") "extrastapes") AnnotationAssertion(Annotation( "UBERON:3000399") "hyostapes") AnnotationAssertion(Annotation( "UBERON:3000399") "medio-stapedial") AnnotationAssertion(Annotation( "UBERON:3000399") "pars quadrata columellae") AnnotationAssertion( "UBERON:3000399") AnnotationAssertion(rdfs:label "pars externa plectri") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pars facialis of maxilla) AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000400") AnnotationAssertion(rdfs:label "pars facialis of maxilla") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pars facialis of maxillopalatine) AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000401") AnnotationAssertion(rdfs:label "pars facialis of maxillopalatine") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pars inferior of labyrinth) AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000405") AnnotationAssertion(rdfs:label "pars inferior of labyrinth") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pars interna plectri) AnnotationAssertion(Annotation( "AOO:LAP") "Plate-like structure that lies in the fenestra ovalis. It arises within the membrana opercularis in the posterior part of the fenestra.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "UBERON:3000406") "operculum auris") AnnotationAssertion(Annotation( "UBERON:3000406") "operculum fenestrae ovalis") AnnotationAssertion( "UBERON:3000406") AnnotationAssertion(rdfs:label "pars interna plectri") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pars media plectri) AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000408") AnnotationAssertion(rdfs:label "pars media plectri") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete pars palatina of maxilla) AnnotationAssertion(Annotation( "AAO:LAP") "Lingual ledge on the inner surface of the maxilla.") AnnotationAssertion( "UBERON:0005871") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "UBERON:3000413") "lamina horizontalis") AnnotationAssertion( "UBERON:3000413") AnnotationAssertion(rdfs:label "obsolete pars palatina of maxilla") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete pars palatina of premaxilla) AnnotationAssertion(Annotation( "AAO:LAP") "Lingual ledge on the inner surface of the premaxilla.") AnnotationAssertion( "UBERON:0034900") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000414") AnnotationAssertion(rdfs:label "obsolete pars palatina of premaxilla") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (perilymphatic system) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "Consists of enlarged cistern against which the operculum and footplate of the columella rest in the oval window. Together with the endolymphatic systems comprises the membranous labryinth of the inner ear. Duellman and Trueb 1994.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000428") AnnotationAssertion(rdfs:label "perilymphatic system") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pila antoptica) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "A strut of cartilage extending dorsally from the basal plate and with other similar cartilages forming the sides of the brain case. The pila antoptica is posterior to pila metoptica together with which it may enclose the foramen for the ocular motor nerve and opthalmica magna artery.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000431") AnnotationAssertion(rdfs:label "pila antoptica") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pila metoptica) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "A strut of cartilage extending dorsally from the basal plate and with other similar cartilages forming the sides of the brain case. The pila metoptica is anterior to pila antoptica together with which it may enclose the foramen for the ocular motor nerve and opthalmica magna artery. Anterior to the pila antoptica is the pila preoptica (another pillar of cartilage) between these two cartilages emerges the optic and trochlear nerves.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000432") AnnotationAssertion(rdfs:label "pila metoptica") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pineal foramen) AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000433") AnnotationAssertion(rdfs:label "pineal foramen") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (planum antorbitale) AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000434") AnnotationAssertion(rdfs:label "planum antorbitale") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (planum conchale) AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000437") AnnotationAssertion(rdfs:label "planum conchale") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (planum internasale) AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000438") AnnotationAssertion(rdfs:label "planum internasale") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (planum terminale) AnnotationAssertion(Annotation( "AAO:LAP") "Vertical plate of cartilage that is fused posterodorsally to the oblique cartilage and anteriorly to the lamina inferior.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "UBERON:3000440") "pars terminalis") AnnotationAssertion(Annotation( "UBERON:3000440") "terminal plate") AnnotationAssertion( "UBERON:3000440") AnnotationAssertion(rdfs:label "planum terminale") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (planum triangulare) AnnotationAssertion(Annotation( "AAO:LAP") "Cartilaginous, distal expansion of the lamina orbitonasalis that invests the pars facialis of the maxilla medially.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000441") AnnotationAssertion(rdfs:label "planum triangulare") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (plectral apparatus) AnnotationAssertion(Annotation( "AAO:LAP") "Complex sound-conducting anatomical structure.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000443") AnnotationAssertion(rdfs:label "plectral apparatus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (posterior condyle) AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000446") AnnotationAssertion(rdfs:label "posterior condyle") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (posterior maxillary process) AnnotationAssertion(Annotation( "AAO:LAP") "Process that extends posteriorly from the planum triangulare and invests the maxilla laterally and the anterior ramus of the pterygoid medially.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000448") AnnotationAssertion(rdfs:label "posterior maxillary process") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (posterior maxillary process dorsal process) AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000449") AnnotationAssertion(rdfs:label "posterior maxillary process dorsal process") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (posterior mental process) AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000450") AnnotationAssertion(rdfs:label "posterior mental process") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (posterolateral vomerine process) AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000453") AnnotationAssertion(rdfs:label "posterolateral vomerine process") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (postnasal wall) AnnotationAssertion(Annotation( "AAO:LAP") "Paired, anteriorly concave structures that form the posterior limit of nasal capsule. It consists of two parts: a ventral piece, the lamina orbitonasalis, and a dorsal plate that is part of the tectum nasi.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "posterior wall of nasal capsule") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000454") AnnotationAssertion(rdfs:label "postnasal wall") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (prearticular coronoid process) AnnotationAssertion(Annotation( "AAO:LAP") "Point of insertion of the masticatory musculature.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000459") AnnotationAssertion(rdfs:label "prearticular coronoid process") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete premaxillary tooth) AnnotationAssertion( "UBERON:2001626") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon. Modified by cjm: added logical definition") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "UBERON:3000464") "premaxillary teeth") AnnotationAssertion( "UBERON:3000464") AnnotationAssertion(rdfs:label "obsolete premaxillary tooth") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (preorbital process of the pars facialis of the maxilla) AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000467") AnnotationAssertion(rdfs:label "preorbital process of the pars facialis of the maxilla") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete presumptive epidermis) AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000473") AnnotationAssertion(rdfs:label "obsolete presumptive epidermis") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete presumptive integument) AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000475") AnnotationAssertion(rdfs:label "obsolete presumptive integument") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (processus ascendens plectri) AnnotationAssertion(Annotation( "AAO:LAP") "Cartilaginous or ligamentous connection between the pars externa plectri and the crista parotica.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "UBERON:3000486") "laterohyale") AnnotationAssertion(Annotation( "UBERON:3000486") "processus ascendens columellae") AnnotationAssertion(Annotation( "UBERON:3000486") "processus dorsalis columellae") AnnotationAssertion(Annotation( "UBERON:3000486") "processus superior columellae") AnnotationAssertion(Annotation( "UBERON:3000486") "suprastapediale") AnnotationAssertion( "UBERON:3000486") AnnotationAssertion(rdfs:label "processus ascendens plectri") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (processus infrafenestralis) AnnotationAssertion(Annotation( "AAO:LAP") "Posterior part of the corpus of the septomaxilla; the posterior surface of the processus infrafenestralis is in contact with the oblique cartilage.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "UBERON:3000492") "dorsal crest") AnnotationAssertion( "UBERON:3000492") AnnotationAssertion(rdfs:label "processus infrafenestralis") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (processus internus of pseudoangular) AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "processus internus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000493") AnnotationAssertion(rdfs:label "processus internus of pseudoangular") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (processus posterior of maxilla) AnnotationAssertion(Annotation( "AAO:LAP") "Posterior, toothless portion of the maxilla by which it usually comes in contact with the quadratojugal.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000500") AnnotationAssertion(rdfs:label "processus posterior of maxilla") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (processus pterygoideus of maxilla) AnnotationAssertion(Annotation( "AAO:LAP") "Posterior end of the pars palatina of the maxilla that is in contact with the anterior ramus of the pterygoid.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000505") AnnotationAssertion(rdfs:label "processus pterygoideus of maxilla") SubClassOf( ) SubClassOf( ) # Class: (processus suprafenestralis) AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000509") AnnotationAssertion(rdfs:label "processus suprafenestralis") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (processus zygomatico-maxillaris) AnnotationAssertion(Annotation( "AAO:LAP") "Posterodorsal extension of the maxilla by which it establishes contact with the squamosal.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000512") AnnotationAssertion(rdfs:label "processus zygomatico-maxillaris") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pseudoangular) AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000515") AnnotationAssertion(rdfs:label "pseudoangular") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pseudodentary) AnnotationAssertion(Annotation( "AAO:EJS"^^xsd:string) "Compound bone of adult Gymnophiona, consisting of dentary, coronoid and mentomeckelian.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000518") AnnotationAssertion(rdfs:label "pseudodentary") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pseudodentary tooth) AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon. Logical definition added by cjm.") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000519") AnnotationAssertion(rdfs:label "pseudodentary tooth") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete pterygoid) AnnotationAssertion(Annotation( "AAO:LAP") "Palatal bones of intramembranous origin that lie anterior to the otic capsules, lateral to the orbits, and medial to the maxillae.") AnnotationAssertion( "UBERON:0010389") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "UBERON:3000521") "pterygoidien") AnnotationAssertion( "UBERON:3000521") AnnotationAssertion(rdfs:label "obsolete pterygoid") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (recessus fenestrae ovalis) AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000538") AnnotationAssertion(rdfs:label "recessus fenestrae ovalis") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (recessus marsupiatus of premaxilla) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "Is a recess on the surface of the premaxilla near to the base of the pars facialis.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000539") AnnotationAssertion(rdfs:label "recessus marsupiatus of premaxilla") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (recessus vaginiformis) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "Is a space on the interior surface of the pars facialis of the maxilla.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000540") AnnotationAssertion(rdfs:label "recessus vaginiformis") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (retroarticular process) AnnotationAssertion(Annotation( "AAO:LAP") "Bony process that is part of the articular and is the point of insertion of the m. interhuoideus posterior.") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000543") AnnotationAssertion(rdfs:label "retroarticular process") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (rostral process) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "Is a process of the nasal bone directed anteriorly towards the rostrum.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000547") AnnotationAssertion(rdfs:label "rostral process") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (septum semicircularium anterior) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "The anterior connective tissue partition between walls of otic capsule around which the membranous semicircular canals pass.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000560") AnnotationAssertion(rdfs:label "septum semicircularium anterior") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (septum semicircularium laterale) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "The lateral connective tissue partition between walls of otic capsule around which the membranous semicircular canals pass.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000561") AnnotationAssertion(rdfs:label "septum semicircularium laterale") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (septum semircularium posterior) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "The posterior connective tissue partition between walls of otic capsule around which the membranous semicircular canals pass.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000562") AnnotationAssertion(rdfs:label "septum semircularium posterior") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (seydels palatal process) AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000563") AnnotationAssertion(rdfs:label "seydels palatal process") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (skeletal support for eminentia olfactoria) AnnotationAssertion(Annotation( "AAO:LAP") "Elevation of the dorsal surface of the solum nasi medial to the fenestra endochoanalis that provides support for the eminentia olfactoria.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000565") AnnotationAssertion(rdfs:label "skeletal support for eminentia olfactoria") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (solum nasi) AnnotationAssertion(Annotation( "AAO:LAP") "Unpaired, horizontal plate that forms the floor of the nasal capsule.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "UBERON:3000569") "nasal floor") AnnotationAssertion(Annotation( "UBERON:3000569") "planum basale") AnnotationAssertion(Annotation( "UBERON:3000569") "solum nasale") AnnotationAssertion( "UBERON:3000569") AnnotationAssertion(rdfs:label "solum nasi") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (spatium sacculare) AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000570") AnnotationAssertion(rdfs:label "spatium sacculare") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (specialized connective tissue) AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000571") AnnotationAssertion(rdfs:label "specialized connective tissue") SubClassOf( ) # Class: (sphenethmoid) AnnotationAssertion(Annotation( "AAO:LAP") "Endochondral bone that forms the anterior portion of the braincase and forms from one ossification center on each side of the orbital cartilage.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "UBERON:3000572") "Os sphenethmoidale") AnnotationAssertion(Annotation( "UBERON:3000572") "orbitosphenoid") AnnotationAssertion(Annotation( "UBERON:3000572") "orbitotemporal") AnnotationAssertion( "UBERON:3000572") AnnotationAssertion(rdfs:label "sphenethmoid") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (stylus of pars media plectri) AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "UBERON:3000580") "columella") AnnotationAssertion(Annotation( "UBERON:3000580") "columella auris") AnnotationAssertion(Annotation( "UBERON:3000580") "columellare") AnnotationAssertion(Annotation( "UBERON:3000580") "interstapediale") AnnotationAssertion(Annotation( "UBERON:3000580") "mediostapediale") AnnotationAssertion(Annotation( "UBERON:3000580") "mesostapediale") AnnotationAssertion(Annotation( "UBERON:3000580") "os columellare") AnnotationAssertion(Annotation( "UBERON:3000580") "os intermedium") AnnotationAssertion(Annotation( "UBERON:3000580") "stapes") AnnotationAssertion(Annotation( "UBERON:3000580") "stelidium") AnnotationAssertion(Annotation( "UBERON:3000580") "stilus columellare") AnnotationAssertion( "UBERON:3000580") AnnotationAssertion(rdfs:label "stylus of pars media plectri") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (sulcus dentalis of maxilla) AnnotationAssertion(Annotation( "AAO:LAP") "Groove located between the pars dentalis and the bases of the maxillary teeth.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000581") AnnotationAssertion(rdfs:label "sulcus dentalis of maxilla") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (sulcus dentalis of premaxilla) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "Groove located between the pars dentalis and the bases of the premaxillary teeth.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000582") AnnotationAssertion(rdfs:label "sulcus dentalis of premaxilla") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (sulcus for Meckels cartilage) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "A groove on the palatoquadrate that is occupied by the Meckel's cartilage.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000583") AnnotationAssertion(rdfs:label "sulcus for Meckels cartilage") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (superior prenasal cartilage) AnnotationAssertion(Annotation( "AAO:LAP") "Paired, elongate cartilages that extend anteroventrally to abut the dorsomedial margin of the posterior face of the alary process of the premaxilla. The function of these cartilages is to transmit the movement of the premaxilla to the alary cartilages during the closure of the apertura nasalis externa.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000586") AnnotationAssertion(rdfs:label "superior prenasal cartilage") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete supraangular) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "The suprangular or surangular is a jaw bone found in most land vertebrates, except mammals. It's usually in the back of the jaw, on the upper edge, and is connected to all other jaw bones: dentary, angular, splenial and articular. It is often a muscle attachment site.") AnnotationAssertion( "UBERON:0011636") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000587") AnnotationAssertion(rdfs:label "obsolete supraangular") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete supraoccipital) AnnotationAssertion(Annotation( "AAO:curator") "Median, unpaired bone that can form the dorsal margin of the foramen magnum.") AnnotationAssertion( "UBERON:0004747") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "UBERON:3010834") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000588") AnnotationAssertion(rdfs:label "obsolete supraoccipital") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (supraorbital flange) AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000590") AnnotationAssertion(rdfs:label "supraorbital flange") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (suprasphenoid) AnnotationAssertion(Annotation( "AAO:LAP") "Endochondral ossification of the dorsomedial portion of the braincase.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000591") AnnotationAssertion(rdfs:label "suprasphenoid") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (symphysis maxillaris) AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000597") AnnotationAssertion(rdfs:label "symphysis maxillaris") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (taenia tecti marginalis) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "Cartilaginous connection between the orbital cartilage and otic capsules.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000599") AnnotationAssertion(rdfs:label "taenia tecti marginalis") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (tectum nasi) AnnotationAssertion(Annotation( "AAO:LAP") "Roof of the nasal capsule, confluent with lamina orbitonasalis posteriorly and united to septum nasi.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "UBERON:3000601") "tectum nasale") AnnotationAssertion( "UBERON:3000601") AnnotationAssertion(rdfs:label "tectum nasi") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (tentacular foramen) AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000605") AnnotationAssertion(rdfs:label "tentacular foramen") SubClassOf( ) # Class: (trochlear foramen) AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "nerve foramen IV") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000610") AnnotationAssertion(rdfs:label "trochlear foramen") SubClassOf( ) # Class: (ventral ramus of squamosal) AnnotationAssertion(Annotation( "AAO:LAP") "Longest of the three squamosal rami; it invests the dorsolateral margin of the palatoquadrate. The distal end of the ventral ramus invests the quadrate and articulates with the quadratojugal.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "UBERON:3000628") "processus posterolateralis") AnnotationAssertion( "UBERON:3000628") AnnotationAssertion(rdfs:label "ventral ramus of squamosal") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (vomerine canal) AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000634") AnnotationAssertion(rdfs:label "vomerine canal") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (zygomatic ramus of squamosal) AnnotationAssertion(Annotation( "AAO:LAP") "Ramus (process) that projects anteriorly from the dorsal body of the squamosal and forms part of the posterior margin of the orbit.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000639") AnnotationAssertion(rdfs:label "zygomatic ramus of squamosal") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (arcus praeoccipitalis) AnnotationAssertion(Annotation( "AAO:LAP") "Skeletal structure that separates the inferior and superior perilymphatic foramina.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000640") AnnotationAssertion(rdfs:label "arcus praeoccipitalis") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (maxillopalatine tooth) AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon. Logical definition added by cjm") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000642") AnnotationAssertion(rdfs:label "maxillopalatine tooth") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (processus lingularis of nasal skeleton) AnnotationAssertion(Annotation( "AAO:LAP") "Rod-shaped process that extends caudally from the inferior edge of the planum terminale.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "processus lingularis") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "UBERON:3000644") "lingular process") AnnotationAssertion( "UBERON:3000644") AnnotationAssertion(rdfs:label "processus lingularis of nasal skeleton") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (corpus) AnnotationAssertion(Annotation( "AAO:LAP") "Basal part of the septomaxilla.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "UBERON:3010459") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "UBERON:3000645") "centrum") AnnotationAssertion(Annotation( "UBERON:3000645") "pars horizontalis") AnnotationAssertion( "UBERON:3000645") AnnotationAssertion(rdfs:label "corpus") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (margo libera) AnnotationAssertion(Annotation( "AAO:LAP") "Anterior, rounded portion of the corpus of the septomaxilla.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000646") AnnotationAssertion(rdfs:label "margo libera") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (crista interna) AnnotationAssertion(Annotation( "AAO:LAP") "Sharp ridge that extends medially from the basal part of the processus infrafenestralis; it separates the diverticulum proncipale from the diverticulum medium.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000647") AnnotationAssertion(rdfs:label "crista interna") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (crista praeopercularis) AnnotationAssertion(Annotation( "AAO:LAP") "Synchondrotic or synostotic connection between the footplate of the pars media plectri and the ventral margin of the fenestra ovalis.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000648") AnnotationAssertion(rdfs:label "crista praeopercularis") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (anterior process of vomer) AnnotationAssertion(Annotation( "AAO:LAP") "Process that extends anterolaterally toward the maxilla-premaxilla articulation.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000649") AnnotationAssertion(rdfs:label "anterior process of vomer") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (processus frontalis of maxilla) AnnotationAssertion(Annotation( "AAO:LAP") "Anterio portion of the maxilla that may contact the nasal and take part in the formation of a groove for the nasolacrimal duct.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "processus frontalis") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "UBERON:3000650") "processus praeorbitalis of the pars facialis") AnnotationAssertion( "UBERON:3000650") AnnotationAssertion(rdfs:label "processus frontalis of maxilla") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lamina anterior of maxilla) AnnotationAssertion(Annotation( "AAO:LAP") "Most anterior part of the maxilla, which is in contact with the premaxilla.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000651") AnnotationAssertion(rdfs:label "lamina anterior of maxilla") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (fossa maxillaris) AnnotationAssertion(Annotation( "AAO:LAP") "Depression lacated on the inner surface of the maxilla between the palatine process and the pars palatina.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "maxillary saddle") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000652") AnnotationAssertion(rdfs:comment "Alternative more fish orientated definition: A fossa that is a depression in the proximal end of the maxilla involved in articulation with the palatine [Baldwin, CC and Johnson GD. 1996. Interrelationships of Aulopiformes. Pages 355-404 in MLJ Stiassny, LR Parenti, and DG Johnson, (eds.), Interrelationships of fishes. Academic Press, San Diego, CA.]. [PHENOSCAPE]") AnnotationAssertion(rdfs:label "fossa maxillaris") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (processus dorsalis of lamella alaris) AnnotationAssertion(Annotation( "AAO:LAP") "Dorsal process of the lamella alaris located at the anterior end of the margo orbitalis; a narrow ligament that runs from the frontoparietal is attached to it.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "processus dorsailis") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000655") AnnotationAssertion(rdfs:label "processus dorsalis of lamella alaris") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (processus posterodorsalis of lamella alaris) AnnotationAssertion(Annotation( "AAO:LAP") "Posterior process of the lamella alaris.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "processus posterodorsalis") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000656") AnnotationAssertion(rdfs:label "processus posterodorsalis of lamella alaris") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (dentigerous process) AnnotationAssertion(Annotation( "AAO:LAP") "Tooth-bearing process of the vomer.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "UBERON:3000657") "torus dentigerous") AnnotationAssertion( "UBERON:3000657") AnnotationAssertion(rdfs:label "dentigerous process") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (prechoanal process) AnnotationAssertion(Annotation( "AAO:LAP") "Process that extends laterally from the anterior process; its bifurcation from the postchoanal process occurs at the level of the dentigerous process.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "UBERON:3000658") "processus choanalis anterior") AnnotationAssertion( "UBERON:3000658") AnnotationAssertion(rdfs:label "prechoanal process") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (postchoanal process) AnnotationAssertion(Annotation( "AAO:LAP") "Process that extends laterally from the anterior process; its bifurcation from the prechoanal process occurs at the level of the dentigerous process.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "UBERON:3000659") "processus choanalis posterior") AnnotationAssertion( "UBERON:3000659") AnnotationAssertion(rdfs:label "postchoanal process") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (margo choanalis) AnnotationAssertion(Annotation( "AAO:LAP") "Margin between the prechoanal and postchoanal process. It bounds the fenestra endochoanalis.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000660") AnnotationAssertion(rdfs:label "margo choanalis") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (crista vomeri) AnnotationAssertion(Annotation( "AAO:LAP") "Ridge on the dorsal surface of the vomer that runs from the anterior to the postchoanal processes of the vomer; it takes part in the fixation of the bone to the lateral margin of the solum nasi.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000661") AnnotationAssertion(rdfs:label "crista vomeri") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (processus posterior of parasphenoid) AnnotationAssertion(Annotation( "AAO:LAP") "Posterior projection of the median part of the parsphenoid, which may extend over the posterior margins of the subotic alae.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "processus posterior") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000662") AnnotationAssertion(rdfs:label "processus posterior of parasphenoid") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (parahyoid) AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000663") AnnotationAssertion(rdfs:label "parahyoid") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (hyoid plate) AnnotationAssertion(Annotation( "AAO:LAP") "Azygous or paired bone that occurs on the ventral surface of the hyoid plate.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000664") AnnotationAssertion(rdfs:label "hyoid plate") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pars reuniens) AnnotationAssertion(Annotation( "AAO:LAP") "Area of fusion of the ceratohyals.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000667") AnnotationAssertion(rdfs:label "pars reuniens") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (hyoglossal sinus) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "Is the space along the anterior edge of the hyoid plate between the hyale and through which passes the hyoglossus muscle as it passes dorsally into the tongue.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000668") AnnotationAssertion(rdfs:comment "A anuran (frog) term") AnnotationAssertion(rdfs:label "hyoglossal sinus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (anterior process of hyoid apparatus) AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000670") AnnotationAssertion(rdfs:label "anterior process of hyoid apparatus") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (anterolateral process of hyoid plate) AnnotationAssertion(Annotation( "AAO:LAP") "Processes that flank the hyales laterally and extend anterolaterally from the anterolateral margin of the hyoid plate. They are formed as a result of new cartilaginous growth lateral to the basibranchial.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "UBERON:3000671") "processus alaris") AnnotationAssertion(Annotation( "UBERON:3000671") "processus anterolateralis") AnnotationAssertion(Annotation( "UBERON:3000671") "processus lateralis anterior") AnnotationAssertion( "UBERON:3000671") AnnotationAssertion(rdfs:label "anterolateral process of hyoid plate") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (posterolateral process) AnnotationAssertion(Annotation( "AAO:LAP") "Paired processes that extend posterolaterally from the posterolateral margin of the hyoid plate. These processes are formed as a result of new cartilaginous growth lateral to the basibranchial and hypobranchial plate.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000672") AnnotationAssertion(rdfs:label "posterolateral process") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (posteromedial process) AnnotationAssertion(Annotation( "AAO:LAP") "Cartilaginous, paired processes that extend posterolaterally from the posterior margin of the hyoid plate. These processes invest the laryngeal apparatus and are ossified in the adult.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "UBERON:3000673") "cornua posteriores") AnnotationAssertion(Annotation( "UBERON:3000673") "hyoid") AnnotationAssertion( "UBERON:3000673") AnnotationAssertion(rdfs:label "posteromedial process") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (bronchial process) AnnotationAssertion(Annotation( "AAO:LAP") "Paired processes that extend posteroventrally from the anterolateral margins of the cricoid ring.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "UBERON:3000676") "processus trachealis") AnnotationAssertion( "UBERON:3000676") AnnotationAssertion(rdfs:label "bronchial process") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lateral process of cricoid cartilage) AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "lateral process") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000677") AnnotationAssertion(rdfs:label "lateral process of cricoid cartilage") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (esophageal process) AnnotationAssertion(Annotation( "AAO:LAP") "Median process located on the posterior end of the cricoid cartilage.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "UBERON:3000678") "spina oesophagea") AnnotationAssertion( "UBERON:3000678") AnnotationAssertion(rdfs:label "esophageal process") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (manubrium of hyale) AnnotationAssertion(Annotation( "AAO:LAP") "Proximal section of the hyale.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "UBERON:3000680") "processus anteriores") AnnotationAssertion( "UBERON:3000680") AnnotationAssertion(rdfs:label "manubrium of hyale") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (hyoid apparatus opening) AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000681") AnnotationAssertion(rdfs:label "hyoid apparatus opening") SubClassOf( ) # Class: (sinus nervi hypoglossi) AnnotationAssertion(Annotation( "AAO:Rocek_2003") "Depression that houses the hypoglossus nerve and is located between the anterolateral process and the proximal part of the hyale.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000683") AnnotationAssertion(rdfs:label "sinus nervi hypoglossi") SubClassOf( ) # Class: (foramen nervi hypoglossi) AnnotationAssertion(Annotation( "AAO:Rocek_2003") "Foramen that houses the hypoglossus nerve and is located between the anterolateral process and the proximal part of the hyale.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "UBERON:3000685") "foramen laterale") AnnotationAssertion( "UBERON:3000685") AnnotationAssertion(rdfs:label "foramen nervi hypoglossi") SubClassOf( ) # Class: (processus confluens) AnnotationAssertion(Annotation( "AAO:LAP") "Strip of cartilage that forms the lateral margin of the foramen nervi hypoglossi.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "UBERON:3000687") "processus alaris") AnnotationAssertion( "UBERON:3000687") AnnotationAssertion(rdfs:label "processus confluens") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (prominentia apicalis dorsalis) AnnotationAssertion(Annotation( "AAO:LAP") "Anterior end of the arytenoid cartilage.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "UBERON:3000688") "prominentia apicalis anterior") AnnotationAssertion( "UBERON:3000688") AnnotationAssertion(rdfs:label "prominentia apicalis dorsalis") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (prominentia apicalis ventralis) AnnotationAssertion(Annotation( "AAO:LAP") "Posterior (cardiac) end of the arytenoid cartilage.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "UBERON:3000689") "prominentia apicalis posterior") AnnotationAssertion( "UBERON:3000689") AnnotationAssertion(rdfs:label "prominentia apicalis ventralis") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pedicel) AnnotationAssertion(Annotation( "AAO:LAP") "Paired stalks located dorsolateral to the vertebral centrum that provide support to the lateral margins of the neural arch laminae.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000692") AnnotationAssertion(rdfs:label "pedicel") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (atlantal cotyle) AnnotationAssertion(Annotation( "AAO:Francis_1934") "Anterior, single or paired concave facets for articulation with the condyle(s) of the urostyle.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "UBERON:3000694") "cavitas glenoidalis") AnnotationAssertion( "UBERON:3000694") AnnotationAssertion(rdfs:label "atlantal cotyle") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (posterior intervertebral notch) AnnotationAssertion(Annotation( "AAO:LAP") "Indentation on the anterior margin of the pedicel. When two vertebrae articulate, the anterior notch of one vertebra and the posterior notch of the other create a bilateral intervertebral space.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000696") AnnotationAssertion(rdfs:label "posterior intervertebral notch") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (intervertebral space) AnnotationAssertion(Annotation( "AAO:LAP") "Space formed by the anterior and posterior intervertebral notches. The intervertebral spaces accommodate the spinal nerves as they emerge from the spinal canal.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "UBERON:3000701") "intervertebral space") AnnotationAssertion( "UBERON:3000701") AnnotationAssertion(rdfs:label "intervertebral space") SubClassOf( ) # Class: (anterior intervertebral notch) AnnotationAssertion(Annotation( "AAO:LAP") "Indentation on the posterior margin of the pedicel. When two vertebrae articulate, the anterior notch of one vertebra and the posterior notch of the other create a bilateral intervertebral space.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000704") AnnotationAssertion(rdfs:label "anterior intervertebral notch") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pleurapophysis) AnnotationAssertion(Annotation( "AAO:Duellman_and_Trueb_1994") "Paired processes that represent the rib attachments to the vertebra plus the ribs.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000707") AnnotationAssertion(rdfs:label "pleurapophysis") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (procoelous) AnnotationAssertion(Annotation( "AAO:Pugener_2002") Annotation( "AAO:Trueb_1973") "Holochordal vertebral centra that are concave anteriorly and convex posteriorly; they bear a condyle on the posterior end for the articulation with the posterior adjacent vertebral centrum, forming a ball-and-socket joint that allows extensive motion in most directions.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000711") AnnotationAssertion(rdfs:label "procoelous") SubClassOf( ) # Class: (opisthocoelous) AnnotationAssertion(Annotation( "AAO:Pugener_2002") Annotation( "AAO:Trueb_1973") "Ectochordal or stegochordal vertebral centra that are convex anteriorly and concave posteriorly; they bear a condyle on the anterior end for the articulation with the posterior adjacent vertebral centrum, forming a ball-and-socket joint that allows extensive motion in most directions.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000712") AnnotationAssertion(rdfs:label "opisthocoelous") SubClassOf( ) # Class: (epichordal) AnnotationAssertion(Annotation( "AAO:Kluge_and_Farris_1969") "Vertebral centrum that originates from ossification of the dorsal portion of the perichordal tube; the resulting element tends to be depressed in cross section.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000713") AnnotationAssertion(rdfs:label "epichordal") SubClassOf( ) # Class: (perichordal) AnnotationAssertion(Annotation( "AAO:Kluge_and_Farris_1969") "Vertebral centrum that originates from ossification of the entire perichordal tube; the resulting element is cylindrical in cross section and may have an open (notochord retained) or solid center.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000714") AnnotationAssertion(rdfs:label "perichordal") SubClassOf( ) # Class: (heterocoelous) AnnotationAssertion(Annotation( "AAO:LAP") "Vertebral centrum that bears saddle-shaped articular surfaces at both ends, having a convexity in the right-left axis and a concavity in the dorsoventral axis. This morphology allows great lateral and vertical flexion.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000715") AnnotationAssertion(rdfs:label "heterocoelous") SubClassOf( ) # Class: (acoelous) AnnotationAssertion(Annotation( "AAO:LAP") "Vertebral centrum with flat ends. Between successive vertebrae there is a fibrocartilaginous intervertebral body with a gel-like core, the nucleus pulposus, which is derived from the embryonic notochord. Acoelous vertebrae seem especially suited to receive and distribute compressive forces within the vertebral column.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "amphiplatyan") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000716") AnnotationAssertion(rdfs:label "acoelous") SubClassOf( ) # Class: (amphicoelous) AnnotationAssertion(Annotation( "AAO:Pugener_2002") Annotation( "AAO:Trueb_1973") "Ectochordal, biconcave or terminally flat vertebral centrum. This design seems to allow limited motion in most directions. An intervertebral body (which may or may not be independent from the adjacent centra) fills the cavity between successive centra. The intervertebral body usually is formed by soft material that may be derived, at least in part, from the embryonic notochord.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000717") AnnotationAssertion(rdfs:comment "The tuatara spine is made up of hourglass-shaped amphicoelous vertebrae, concave both before and behind. This is the usual condition of fish vertebrae and some amphibians, but is unique to tuatara within the amniotes[Wikipedia].") AnnotationAssertion(rdfs:label "amphicoelous") SubClassOf( ) # Class: (ectochordal) AnnotationAssertion(Annotation( "AAO:Griffiths_1959") "Spool-shaped vertebral centrum with an open center in which the notochord lies.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000718") AnnotationAssertion(rdfs:label "ectochordal") SubClassOf( ) # Class: (holochordal) AnnotationAssertion(Annotation( "AAO:Griffiths_1959") "Spool-shaped vertebral centrum with a solid center. All traces of the notochord dissapear.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000719") AnnotationAssertion(rdfs:label "holochordal") SubClassOf( ) # Class: (stegochordal) AnnotationAssertion(Annotation( "AAO:Griffiths_1959") "Vertebral centrum that is depressed dorsoventrally and solid. All traces of the notochord dissapear.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000720") AnnotationAssertion(rdfs:label "stegochordal") SubClassOf( ) # Class: (nucal keel) AnnotationAssertion(Annotation( "AAO:Duellman_and_Trueb_1994") "Longitudinal process found in all cervical vertebrae, except the atlas, for the attachment of dorsal head musculature.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000728") AnnotationAssertion(rdfs:label "nucal keel") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (foramen nutritium) AnnotationAssertion(Annotation( "AAO:LAP") "Opening on the lateral side of the vertebra for the passage of blood vessels.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000730") AnnotationAssertion(rdfs:label "foramen nutritium") SubClassOf( ) # Class: (mid-dorsal keel) AnnotationAssertion(Annotation( "AAO:Pugener_2002") "Ridge-shaped structure present on the dorsomedial surface of the neural arch lamina; this structure is produced at the point of junction of the contralateral sides of each neural arch.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000735") AnnotationAssertion(rdfs:label "mid-dorsal keel") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete deltopectoral crest) AnnotationAssertion(Annotation( "AAO:LAP") "Ridge on the ventral aspect of the humeral shaft. It serves for the attachment of the mm pectoralis and shoulder musculature used primarily for limb adduction.") AnnotationAssertion( "UBERON:0002498") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "crista ventralis") AnnotationAssertion(Annotation( "UBERON:3000736") "crista ventralis humeri") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "UBERON:3000736") "deltoid crest") AnnotationAssertion( "UBERON:3000736") AnnotationAssertion(rdfs:label "obsolete deltopectoral crest") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (sacral condyle) AnnotationAssertion(Annotation( "AAO:LAP") "Anterior, paired convex facets for articulation with the cotyle(s) of the urostyle.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000743") AnnotationAssertion(rdfs:label "sacral condyle") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (urostyle cotyle) AnnotationAssertion(Annotation( "AAO:LAP") "Anterior, single or paired concave facets for articulation with the sacral condyle(s).") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "UBERON:3000744") "fossa condyloidea ossis coccygei") AnnotationAssertion( "UBERON:3000744") AnnotationAssertion(rdfs:label "urostyle cotyle") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (webbing of bone in vertebral column) AnnotationAssertion(Annotation( "AAO:Pugener_and_Maglia_2008") "In anurans, pair of bony plates that connect the posteromedial margins of the sacral diapophyses with the lateral margins of the anterior portion of the urostyle.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000745") AnnotationAssertion(rdfs:label "webbing of bone in vertebral column") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (urostyle ridge) AnnotationAssertion(Annotation( "AAO:Maglia_et_al_2007") "Longitudinal crest on the dorsal side of the urostyle formed by the caudal neural arches.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "UBERON:3000746") "crista ossi coccygei") AnnotationAssertion( "UBERON:3000746") AnnotationAssertion(rdfs:label "urostyle ridge") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (suprascapula) AnnotationAssertion(Annotation( "AAO:LAP") "Paired, cartilaginous elements located in the dorsolateral shoulder region. Each suprascapula is a flat broad blade that extends medially.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "UBERON:3000748") "adscapulum") AnnotationAssertion(Annotation( "UBERON:3000748") "episcapulum") AnnotationAssertion(Annotation( "UBERON:3000748") "omolita") AnnotationAssertion(Annotation( "UBERON:3000748") "scapula major") AnnotationAssertion( "UBERON:3000748") AnnotationAssertion(rdfs:label "suprascapula") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pars acromialis) AnnotationAssertion(Annotation( "AAO:LAP") "Prominent structure (anteromedial head) that forms the anterior section of the ventral margin of the scapula.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000752") AnnotationAssertion(rdfs:label "pars acromialis") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pars glenoidalis of scapula) AnnotationAssertion(Annotation( "AAO:LAP") "Concave structure (posteromedial head) that forms the posterior head of the ventral margin of the scapula. The pars glenoidalis articulates with the humerus, and comprises the dorsal portion of the glenoid fossa.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "glenoid head of scapula") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000753") AnnotationAssertion(rdfs:label "pars glenoidalis of scapula") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pectoral girdle opening) AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000755") AnnotationAssertion(rdfs:label "pectoral girdle opening") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (crista dorsalis humeri) AnnotationAssertion(Annotation( "AAO:LAP") "Small hooked process on the dorsal aspect of the humeral shaft; it does not extend on to the glenoid head. The m subscapularis is inserted on it.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "UBERON:3000756") "crista dorsalis") AnnotationAssertion( "UBERON:3000756") AnnotationAssertion(rdfs:label "crista dorsalis humeri") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (zonal area) AnnotationAssertion(Annotation( "AAO:LAP") "All those parts of the pectoral girdle ventral and medial to the glenoid fossa.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000757") AnnotationAssertion(rdfs:label "zonal area") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (omosternum) AnnotationAssertion(Annotation( "AAO:LAP") "Proximal portion of the prezonal element of the pectoral girdle. It may be a flat, midventral cartilaginous structure or a calcified or bony element elaborated into a stylum.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "UBERON:3000759") "episternum") AnnotationAssertion(Annotation( "UBERON:3000759") "interclavicle") AnnotationAssertion(Annotation( "UBERON:3000759") "prezonal element") AnnotationAssertion(Annotation( "UBERON:3000759") "prezonal sternum") AnnotationAssertion(Annotation( "UBERON:3000759") "sternum superior") AnnotationAssertion( "UBERON:3000759") AnnotationAssertion(rdfs:label "omosternum") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (epicoracoid) AnnotationAssertion(Annotation( "AAO:LAP") "Paired, flat cartilaginous arches that compose the central portion of the zonal area, unites the clavicle and coracoid of each half of the pectoral girdle, and form the medial margins of the pectoral fenestrae.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "UBERON:3000762") "coracoid cartilage") AnnotationAssertion(Annotation( "UBERON:3000762") "corpus sterni") AnnotationAssertion(Annotation( "UBERON:3000762") "entosternal") AnnotationAssertion(Annotation( "UBERON:3000762") "infracoracoid") AnnotationAssertion(Annotation( "UBERON:3000762") "sterni ossa media") AnnotationAssertion( "UBERON:3000762") AnnotationAssertion(rdfs:label "epicoracoid") SubClassOf( ) SubClassOf( ) # Class: (epicoracoid bridge) AnnotationAssertion(Annotation( "AAO:LAP") "A pair of cartilaginous expansions (one from each epicoracoid cartilage) that project anteriorly. They articulate anteriorly with the omosternum.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "UBERON:3000763") "procoracoid bridge") AnnotationAssertion( "UBERON:3000763") AnnotationAssertion(rdfs:label "epicoracoid bridge") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pelvic girdle opening) AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000767") AnnotationAssertion(rdfs:label "pelvic girdle opening") SubClassOf( ) # Class: (acetabular depression) AnnotationAssertion(Annotation( "AAO:LAP") "The central, most concave portion of the acetabulum, which remains open.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000771") AnnotationAssertion(rdfs:label "acetabular depression") SubClassOf( ) # Class: (ilial ridge) AnnotationAssertion(Annotation( "AAO:LAP") "Longitudinal crest on the dorsal side of the shaft of the ilium.") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "UBERON:3000773") "ala ossis ilei") AnnotationAssertion( "UBERON:3000773") AnnotationAssertion(rdfs:label "ilial ridge") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (ilial shaft) AnnotationAssertion(Annotation( "AAO:LAP") "Anterior rod that articulates with the sacrum.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000774") AnnotationAssertion(rdfs:label "ilial shaft") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete ilial corpus) AnnotationAssertion(Annotation( "AAO:LAP") "Posterior body of the ilium that forms the anterior half of the acetabulum.") AnnotationAssertion( "UBERON:0010747") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000775") AnnotationAssertion(rdfs:label "obsolete ilial corpus") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (glenoid foramen) AnnotationAssertion(Annotation( "AAO:LAP") "Opening on the glenoid fossa.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000776") AnnotationAssertion(rdfs:label "glenoid foramen") SubClassOf( ) # Class: (epicoracoid horn) AnnotationAssertion(Annotation( "AAO:LAP") "A pair of cartilaginous expansions (one from each epicoracoid cartilage) that project posteriorly. They articulate with the sternum by means of grooves, pouches or fossae in the dorsal surface of the sternum and provide a site for the insertion of a pair of muscles derived from the m. rectus abdominis.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000777") AnnotationAssertion(rdfs:label "epicoracoid horn") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (supracoracoid foramen) AnnotationAssertion(Annotation( "AAO:LAP") "Opening on the scapulocoracoid bone through which passes the n. supracoracoideus and the corresponding artery and vein.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "UBERON:3000778") "foramen supracoracoideum") AnnotationAssertion( "UBERON:3000778") AnnotationAssertion(rdfs:label "supracoracoid foramen") SubClassOf( ) # Class: (pectoral fenestra) AnnotationAssertion(Annotation( "AAO:LAP") "Ovoid space on the pectoral girdle limited anteriorly by the procoracoid, medially by the epicoracoid, and posteriorly by the coracoid.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "UBERON:3000779") "fenestra between procoracoid and coracoid") AnnotationAssertion( "UBERON:3000779") AnnotationAssertion(rdfs:label "pectoral fenestra") SubClassOf( ) # Class: (incisura coracoidea) AnnotationAssertion(Annotation( "AAO:LAP") "Notch that separates the cartilaginous regions of the procoracoid and coracoid.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000780") AnnotationAssertion(rdfs:label "incisura coracoidea") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (fovea capitis of humerus) AnnotationAssertion(Annotation( "AAO:LAP") "Ovoid roughened pit, which is situated a little below and behind the center of the head, and serves as a site of attachment for ligaments.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000783") AnnotationAssertion(rdfs:comment "Not to be confused with the fovea capitis of the femur") AnnotationAssertion(rdfs:label "fovea capitis of humerus") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (ulnar condyle) AnnotationAssertion(Annotation( "AAO:LAP") "Semi-elliptical ball located at the lower end of the humerus, adjacent to the humeral ball.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "UBERON:3000784") "medial condyle") AnnotationAssertion( "UBERON:3000784") AnnotationAssertion(rdfs:label "ulnar condyle") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (trochlear groove of humerus) AnnotationAssertion(Annotation( "AAO:LAP") "Furrow between the humeral head and the ulnar condyle.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "trochlear sulcus of humerus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000785") AnnotationAssertion(rdfs:label "trochlear groove of humerus") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (fossa cubitalis ventralis) AnnotationAssertion(Annotation( "AAO:LAP") "Depresion on the distal end of the humerus, just anterior to the humeral head, in which the end of the radius fits when the forelimb is flexed.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000786") AnnotationAssertion(rdfs:label "fossa cubitalis ventralis") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (collum antibrachii) AnnotationAssertion(Annotation( "AAO:LAP") "In a fused radio-ulna, the proximal portion of the compound bone (where the sulcus longitudinalis is barely evident or absent) is a cylindrical pillar.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000787") AnnotationAssertion(rdfs:label "collum antibrachii") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (anomocoelous) AnnotationAssertion(Annotation( "AAO:Trueb_1973") "Stegochordal slightly biconcave or flat terminally vertebral centrum. Each intervertebral cartilage is subdivided anteriorly and posteriorly, producing a free intervertebral element between adjacent vertebrae. This element subsequently ossifies and remains free.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000793") AnnotationAssertion(rdfs:label "anomocoelous") SubClassOf( ) # Class: (displasiocoelous) AnnotationAssertion(Annotation( "AAO:Trueb_1973") "Vertebral column in which the first seven vertebrae have holochordal centra and the intervertebral cartilages are posteriorly subdivided in the procoelous manner. The eighth presacral vertebra has a holochordal centrum and the intervertebral cartilage is subdivided in the opisthocoelous manner. Thus, the first seven presacral vertebrae are concave anteriorly and convex posteriorly, whereas the eighth is biconcave.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000794") AnnotationAssertion(rdfs:label "displasiocoelous") SubClassOf( ) # Class: (imbricate neural arch) AnnotationAssertion(Annotation( "AAO:Trueb_1973") "Overlapping neural arches that obscure the spinal cord dorsally.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000796") AnnotationAssertion(rdfs:label "imbricate neural arch") SubClassOf( ) # Class: (non-imbricate neural arch) AnnotationAssertion(Annotation( "AAO:Trueb_1973") "Neural arches that do not overlap, thus exposing the spinal cord dorsally.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000797") AnnotationAssertion(rdfs:label "non-imbricate neural arch") SubClassOf( ) # Class: (presacral shield) AnnotationAssertion(Annotation( "AAO:Trueb_1973") "Dorsal, dermal plate of bone that overlies the presacral vertebrae. Such shield usually has irregular, sculptured surfaces, frequently is broadly expanded, and may be composed of several separate plates.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000798") AnnotationAssertion(rdfs:label "presacral shield") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (cartilago paraglenoidalis) AnnotationAssertion(Annotation( "AAO:LAP") "Strip of cartilage that separates the coracoid from the scapula.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000799") AnnotationAssertion(rdfs:label "cartilago paraglenoidalis") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (intercotylar space) AnnotationAssertion(Annotation( "AAO:LAP") "Space between the atlantal cotyles.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "UBERON:3000800") "spatium interglenoidale") AnnotationAssertion( "UBERON:3000800") AnnotationAssertion(rdfs:label "intercotylar space") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (caput glenoidale) AnnotationAssertion(Annotation( "AAO:LAP") "Convex articular facet of the vertebral centrum for the articulation with the adjacent centrum.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000801") AnnotationAssertion(rdfs:label "caput glenoidale") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (fossa glenoidalis) AnnotationAssertion(Annotation( "AAO:LAP") "Concave articular facet of the vertebral centrum for the articulation with the adjacent centrum.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000802") AnnotationAssertion(rdfs:label "fossa glenoidalis") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (sulcus articularis lateralis) AnnotationAssertion(Annotation( "AAO:LAP") "In a zygapophysis that has ridges and sulci, the lateral canal between the carina distalis and the carina medialis.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000803") AnnotationAssertion(rdfs:label "sulcus articularis lateralis") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (sulcus articularis medialis) AnnotationAssertion(Annotation( "AAO:LAP") "In a zygapophysis that has ridges and sulci, the medial canal between the carina medialis and the carina proximalis.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000804") AnnotationAssertion(rdfs:label "sulcus articularis medialis") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (carina proximalis) AnnotationAssertion(Annotation( "AAO:LAP") "In a zygapophysis that has ridges and sulci, the proximal ridge.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000805") AnnotationAssertion(rdfs:label "carina proximalis") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (carina medialis) AnnotationAssertion(Annotation( "AAO:LAP") "In a zygapophysis that has ridges and sulci, the medial ridge.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000806") AnnotationAssertion(rdfs:label "carina medialis") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (carina distalis) AnnotationAssertion(Annotation( "AAO:LAP") "In a zygapophysis that has ridges and sulci, the distal ridge.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000807") AnnotationAssertion(rdfs:label "carina distalis") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (parasagittal processes) AnnotationAssertion(Annotation( "AAO:Cannatella_1985") "Paired, posteriorly directed process at the posterior margin of each neural arch lamina.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000808") AnnotationAssertion(rdfs:label "parasagittal processes") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (accessory articulation) AnnotationAssertion(Annotation( "AAO:Cannatella_1985") "Paired, additional vertebral articulations located medial to the intervertebral space, adjacent to the vertebral centrum.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000809") AnnotationAssertion(rdfs:label "accessory articulation") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (fissura sagittalis) AnnotationAssertion(Annotation( "AAO:Maglia_et_al_2007") "Medial groove in the longitudinal ridge of the urostyle formed by the incomplete dorsal fusion of the caudal neural arches.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000810") AnnotationAssertion(rdfs:label "fissura sagittalis") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (glenoid end of clavicle) AnnotationAssertion(Annotation( "AAO:LAP") "Lateral end of the clavicle, which usually lies in close proximity to the pars acromialis of the scapula, and occassionally may fuse to it.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "UBERON:3000811") "extremitas glenoidalis") AnnotationAssertion( "UBERON:3000811") AnnotationAssertion(rdfs:label "glenoid end of clavicle") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (sulcus pro cartilagine praecoracoidealis) AnnotationAssertion(Annotation( "AAO:LAP") "Canal on the posterior aspect of the clavicle that accomodates the anterior margin of the procoracoid cartilage.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000813") AnnotationAssertion(rdfs:label "sulcus pro cartilagine praecoracoidealis") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (margo anterior of scapula) AnnotationAssertion(Annotation( "AAO:LAP") "Anterior margin of the scapula.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000818") AnnotationAssertion(rdfs:label "margo anterior of scapula") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (margo clavicularis) AnnotationAssertion(Annotation( "AAO:LAP") "Inferior margin of the pars acromialis of the scapula, which articulates with the clavicule.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000819") AnnotationAssertion(rdfs:label "margo clavicularis") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (margo posterior of scapula) AnnotationAssertion(Annotation( "AAO:LAP") "Posterior margin of the scapula.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000820") AnnotationAssertion(rdfs:label "margo posterior of scapula") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (margo suprascapularis) AnnotationAssertion(Annotation( "AAO:LAP") "Superior margin of the scapula, which articulates with the suprascapula.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000821") AnnotationAssertion(rdfs:label "margo suprascapularis") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pars suprascapularis) AnnotationAssertion(Annotation( "AAO:LAP") "Superior portion of the scapula, which is thinner than the rest of the shaft.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000822") AnnotationAssertion(rdfs:label "pars suprascapularis") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (sinus interglenoidalis) AnnotationAssertion(Annotation( "AAO:LAP") "Notch or indentation between the pars glenoidalis and pars acromialis of the scapula.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000823") AnnotationAssertion(rdfs:label "sinus interglenoidalis") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (tenuitas cristaeformis) AnnotationAssertion(Annotation( "AAO:LAP") "Leading (anterior) portion of the scapula, which is thinner than the rest of the shaft.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000824") AnnotationAssertion(rdfs:label "tenuitas cristaeformis") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (crista longitudinalis scapula) AnnotationAssertion(Annotation( "AAO:LAP") "Longitudinal ridge on the medial (inner) face of the scapula.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000825") AnnotationAssertion(rdfs:label "crista longitudinalis scapula") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (crista lateralis humeri) AnnotationAssertion(Annotation( "AAO:LAP") "Ridge on the lateral aspect of the humeral shaft located just anterior to the radial (lateral) epicondyle.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000836") AnnotationAssertion(rdfs:label "crista lateralis humeri") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (crista medialis humeri) AnnotationAssertion(Annotation( "AAO:LAP") "Ridge on the medial aspect of the humeral shaft that extends from the level of the middle portion of the shaft to ulnar (medial) epicondyle.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000837") AnnotationAssertion(rdfs:label "crista medialis humeri") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (crista radii) AnnotationAssertion(Annotation( "AAO:LAP") "Small ridge on the lateral aspect of the radial shaft, located at the level of the collum antibrachii.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000839") AnnotationAssertion(rdfs:label "crista radii") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (capitulum of radius) AnnotationAssertion(Annotation( "AAO:LAP") "Lateral portion of the proximal (upper) articular surface of the radius that consists of an eminence with a rounded apex.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000840") AnnotationAssertion(rdfs:label "capitulum of radius") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete capitulum radii) AnnotationAssertion(Annotation( "AAO:LAP") "Small eminence on the distal articular head of the radius.") AnnotationAssertion( "UBERON:3000840") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000841") AnnotationAssertion(rdfs:label "obsolete capitulum radii") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (capitulum ulnae) AnnotationAssertion(Annotation( "AAO:LAP") "Small eminence on the distal articular head of the ulna.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000842") AnnotationAssertion(rdfs:label "capitulum ulnae") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (sulcus longitudinalis) AnnotationAssertion(Annotation( "AAO:LAP") "In a fused radio-ulna, longitudinal furrow that demarcates the area of fusion of both elements. This sulcus is deep in the distal portion of the compound bone, but barely evident or absent at the proximal end.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000844") AnnotationAssertion(rdfs:label "sulcus longitudinalis") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (element Y of fore mesopodium) AnnotationAssertion(Annotation( "AAO:LAP") "Oval carpal element that is located on the anteromedial side of the radiale and the anterolateral side of the ulnare. Anteriorly, it articulates with carpals 1 through 4 (or 2 through 5 according to some authors). It is also recognized as centrale by some authors. This element originates from one, two, or three condensation centers. Occasionally it may fuse to carpal 2(1), carpal 3(2), the ulnare, or other elements.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000846") AnnotationAssertion(rdfs:label "element Y of fore mesopodium") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (intercalary element of fore digit) AnnotationAssertion(Annotation( "AAO:LAP") "Small elements present in all digits of the manus, when present in a taxon. Each intercalary element articulates with the anteroventral end of the penultimate phalanx proximally and the distal phalanx distally.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000856") AnnotationAssertion(rdfs:label "intercalary element of fore digit") SubClassOf( ) # Class: (foramen perforans carpi) AnnotationAssertion(Annotation( "AAO:LAP") "Opening for the passage of the perforans carpi artery from the ventral to the dorsal side. It perforates the compound ulnare + intermedium.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000859") AnnotationAssertion(rdfs:label "foramen perforans carpi") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pubo-ischium) AnnotationAssertion(Annotation( "AAO:LAP") "Composite element formed by the fusion of the ischium and pubis.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000862") AnnotationAssertion(rdfs:label "pubo-ischium") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (epileon) AnnotationAssertion(Annotation( "AAO:LAP") "Dorsal extremity of the ilial shaft, which remains cartilaginous.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000865") AnnotationAssertion(rdfs:label "epileon") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (agger limitans anterior of ilium) AnnotationAssertion(Annotation( "AAO:LAP") "Shelf-like expansion of the ilial corpus that forms the anterior border of the acetabulum.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000866") AnnotationAssertion(rdfs:label "agger limitans anterior of ilium") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (agger limitans anterior of ischium) AnnotationAssertion(Annotation( "AAO:LAP") "Shelf-like expansion of the ischium that forms the posterior border of the acetabulum.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000867") AnnotationAssertion(rdfs:label "agger limitans anterior of ischium") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete supra-acetabular expansion) AnnotationAssertion(Annotation( "AAO:LAP") "Dorsal portion of the ilial corpus, located above the acetabulum.") AnnotationAssertion( "UBERON:4200125") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "UBERON:3000868") "dorsal acetabular expansion") AnnotationAssertion(Annotation( "UBERON:3000868") "pars ascendens ilei") AnnotationAssertion( "UBERON:3000868") AnnotationAssertion(rdfs:label "obsolete supra-acetabular expansion") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (ilial protuberance) AnnotationAssertion(Annotation( "AAO:LAP") "Small, dorsolaterally projecting knob located just anterior to the supra-acetabular expansion and about the level of the anterior border of the acetabulum.") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "UBERON:3000869") "dorsal protuberance") AnnotationAssertion(Annotation( "UBERON:3000869") "tuber superior") AnnotationAssertion( "UBERON:3000869") AnnotationAssertion(rdfs:label "ilial protuberance") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (preacetabular expansion) AnnotationAssertion(Annotation( "AAO:LAP") "Ventral portion of the ilial corpus, located anteroventral to the acetabulum.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "UBERON:3000870") "pars descendens ilei") AnnotationAssertion(Annotation( "UBERON:3000870") "ventral acetabular expansion") AnnotationAssertion( "UBERON:3000870") AnnotationAssertion(rdfs:label "preacetabular expansion") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (fossula tuberis superioris) AnnotationAssertion(Annotation( "AAO:LAP") "Small depression dorsal to the proximal portion of the collum ilei and ventral to the ilial protuberance.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000871") AnnotationAssertion(rdfs:label "fossula tuberis superioris") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (collum ilei) AnnotationAssertion(Annotation( "AAO:LAP") "Cyllindrical pillar that originates anterior to the acetabulum and extends to the ilial shaft.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000872") AnnotationAssertion(rdfs:label "collum ilei") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pars cylindriformis ilei) AnnotationAssertion(Annotation( "AAO:LAP") "Elongate, cylindrical structure on the ventral side of the shaft of the ilium that extends through its entire length.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000873") AnnotationAssertion(rdfs:label "pars cylindriformis ilei") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (crista ischii) AnnotationAssertion(Annotation( "AAO:LAP") "Crest on the posterior side of the ischium, which may also extend to the posteroventral aspect of pubis.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000874") AnnotationAssertion(rdfs:label "crista ischii") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (spina pelvis posterior) AnnotationAssertion(Annotation( "AAO:LAP") "Small, rounded process on the anterodorsal margin of the ischium, just posterior to the area of articulation with the ilium.") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000875") AnnotationAssertion(rdfs:label "spina pelvis posterior") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (spina pelvis anterior) AnnotationAssertion(Annotation( "AAO:LAP") "Small, rounded process on the anteroventral margin of the preacetabular expansion of the ilial corpus.") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000876") AnnotationAssertion(rdfs:label "spina pelvis anterior") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (intumescentia bilateralis inferior) AnnotationAssertion(Annotation( "AAO:LAP") "Small protuberance on the ischium, located close to its posteroventral margin.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000877") AnnotationAssertion(rdfs:label "intumescentia bilateralis inferior") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (intumescentia bilateralis superior) AnnotationAssertion(Annotation( "AAO:LAP") "Small protuberance on the ischium, located at the level of the superior margin of the acetabulum and close to its posterior margin.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000878") AnnotationAssertion(rdfs:label "intumescentia bilateralis superior") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (incisura terminalis) AnnotationAssertion(Annotation( "AAO:LAP") "Small indentation on the posterior margin of the ischium, ventral to the intumescentia bilateralis superior.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000879") AnnotationAssertion(rdfs:label "incisura terminalis") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (crista hypertrophica ischium) AnnotationAssertion(Annotation( "AAO:LAP") "Large protuberance on the dorsal aspect of the ischium that extends from the ischio-ilium articulation to the spina pelvis posterior.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000880") AnnotationAssertion(rdfs:label "crista hypertrophica ischium") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (interilial region) AnnotationAssertion(Annotation( "AAO:LAP") "Area of convergence of the ilial shafts. When the preacetabular ilium is narrow, the interilial configuration is V-shaped or narrowly rounded, whereas when the interilial region is broadly expanded the interilial configuration is U-shaped.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000882") AnnotationAssertion(rdfs:label "interilial region") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (recessus coccygealis) AnnotationAssertion(Annotation( "AAO:LAP") "Area dorsal to the pelvic girdle symphysis, between the dorsal portions of the ilial corpora, where lies the posterior terminus of the urostyle.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000883") AnnotationAssertion(rdfs:label "recessus coccygealis") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (epipubis) AnnotationAssertion(Annotation( "AAO:LAP") "Small prepubic element formed by a plate of cartilage (which may calcify in the adult) that is synchondrotically united with the pubis.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000884") AnnotationAssertion(rdfs:label "epipubis") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete Nobelian bone) AnnotationAssertion(Annotation( "AAO:LAP") "Paired cartilaginous rods that lie within the copulatory organ (or so-called tail) and are attached to the posteroventral part of the pelvic girdle.") AnnotationAssertion( "UBERON:3010240") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "postpubis") AnnotationAssertion( "UBERON:3000885") AnnotationAssertion(rdfs:label "obsolete Nobelian bone") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (ypsiloid cartilage) AnnotationAssertion(Annotation( "AAO:LAP") "Y-shaped cartilage lying in the middle line, anterior to the pubo-ischium with which it articulates. It lies dorsal to the rectus abdominis muscle with which it articulates.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "UBERON:3000886") "abdominal sternum") AnnotationAssertion(Annotation( "UBERON:3000886") "cartilago epipubes") AnnotationAssertion(Annotation( "UBERON:3000886") "cartilago marsupial") AnnotationAssertion(Annotation( "UBERON:3000886") "cartilago ypsiloidea") AnnotationAssertion(Annotation( "UBERON:3000886") "cartilago ypsiloides") AnnotationAssertion( "UBERON:3000886") AnnotationAssertion(rdfs:label "ypsiloid cartilage") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (femoral ridge) AnnotationAssertion(Annotation( "AAO:LAP") "Low crest that arises just behind the acetabular head and extends distally for about one-third the length of the femoral shaft.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "UBERON:3000894") "crista femoris") AnnotationAssertion( "UBERON:3000894") AnnotationAssertion(rdfs:label "femoral ridge") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete trochlear groove of femur) AnnotationAssertion(Annotation( "AAO:LAP") "Canal on the posteroventral surface of the femoral head, which articulates with the ischial process on the rim of the acetabulum.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000895") AnnotationAssertion(rdfs:label "obsolete trochlear groove of femur") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (foveal depression) AnnotationAssertion(Annotation( "AAO:LAP") "Ovoid roughened pit situated on the dorsal and anteroventral surface of the acetabular head wherein the ligaments attaching the bone to the acetabulum are inserted.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000896") AnnotationAssertion(rdfs:label "foveal depression") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (trochanteric crest) AnnotationAssertion(Annotation( "AAO:LAP") "Paired ridges on the ventral surface of the femoral shaft that run toward the femoral trochanter; the posterior crest is less developed.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000898") AnnotationAssertion(rdfs:label "trochanteric crest") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (tibial crest) AnnotationAssertion(Annotation( "AAO:LAP") "Ridge that arises from the dorso-masial side of the extensor surface of the tibia. It receives the insertion of the tendon of the extensor ilio-tibialis muscle.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000903") AnnotationAssertion(rdfs:label "tibial crest") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (apophysis distalis of tibiofibula) AnnotationAssertion(Annotation( "AAO:LAP") "Swelling on the extensor surface of the distal head of the tibiofibula.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000904") AnnotationAssertion(rdfs:label "apophysis distalis of tibiofibula") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (caput ossis cruris) AnnotationAssertion(Annotation( "AAO:LAP") "Proximal head of the tibiofibula that articulates with the distal head of the femur.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000905") AnnotationAssertion(rdfs:label "caput ossis cruris") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (sulcus pro musculo extensori cruris brevis) AnnotationAssertion(Annotation( "AAO:LAP") "Small canal on the proximal head of to the tibiofibula, lateral to the apophysis distalis, for the insertion of the cruris brevis muscle.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000906") AnnotationAssertion(rdfs:label "sulcus pro musculo extensori cruris brevis") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (eminentia arcuata) AnnotationAssertion(Annotation( "AAO:LAP") "Small crest on the extensor surface of the proximal head of the tibiofibula (tibial side).") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000907") AnnotationAssertion(rdfs:label "eminentia arcuata") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (sulcus distalis ossis cruris) AnnotationAssertion(Annotation( "AAO:LAP") "In a fused tibiofibula, longitudinal furrow in the distal portion of the compound bone that demarcates the area of fusion of both elements.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000908") AnnotationAssertion(rdfs:label "sulcus distalis ossis cruris") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (sulcus proximalis ossis cruris) AnnotationAssertion(Annotation( "AAO:LAP") "In a fused tibiofibula, longitudinal furrow in the proximal portion of the compound bone that demarcates the area of fusion of both elements.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000909") AnnotationAssertion(rdfs:label "sulcus proximalis ossis cruris") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete hind limb opening) AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000910") AnnotationAssertion(rdfs:label "obsolete hind limb opening") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (foramen nutritium exterius) AnnotationAssertion(Annotation( "AAO:LAP") "Foramen for the tibial artery and vein and the deep peroneal nerve; it pierces through the midpoint of the shaft of the tibiofibula.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000911") AnnotationAssertion(rdfs:label "foramen nutritium exterius") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (spatium intertarsale) AnnotationAssertion(Annotation( "AAO:LAP") "Separation of the tibiale and fibulare along their longitudinal axia.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000915") AnnotationAssertion(rdfs:label "spatium intertarsale") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (apophysis proximalis) AnnotationAssertion(Annotation( "AAO:LAP") "Swelling on the extensor surface of the proximal compound head of the tibiale and fibulare.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000916") AnnotationAssertion(rdfs:label "apophysis proximalis") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (apophysis distalis of tibiale fibulare) AnnotationAssertion(Annotation( "AAO:LAP") "Swelling on the extensor surface of the distal compound head of the tibiale and fibulare.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000917") AnnotationAssertion(rdfs:label "apophysis distalis of tibiale fibulare") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (element Y of hind mesopodium) AnnotationAssertion(Annotation( "AAO:LAP") "Oval tarsal element that is located on the anteromedial side of the tibiale. Anteriorly, it articulates with the proximal prehallux, tarsals 1, 2, and 3.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000921") AnnotationAssertion(rdfs:label "element Y of hind mesopodium") SubClassOf( ) # Class: (prehallux skeleton) AnnotationAssertion(Annotation( "AAO:LAP") "One to three or four elements located ventral and medial to the metatarsal of digit I. When more than one elements are present, they are smaller than the proximal prehallux.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). It was modified by cjm in the following way: the class was relabeled from 'prepollex' to 'prepollex skeleton', to distinguish it from the digit-like structure which it is a part of. It was re-classified from bone to subdivision of skeleton, as it may in fact be composed of multiple individual bones. TODO: definition needs reviewed, and it still requires placement under the UBERON:0012136 ! prehallux") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "prehallux") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000922") AnnotationAssertion(rdfs:label "prehallux skeleton") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (intercalary element of hind digit) AnnotationAssertion(Annotation( "AAO:LAP") "Small elements present in all digits of the pes, when present in a taxon. Each intercalary element articulates with the anteroventral end of the penultimate phalanx proximally and the distal phalanx distally.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000931") AnnotationAssertion(rdfs:label "intercalary element of hind digit") SubClassOf( ) # Class: (foramen perforans tarsi) AnnotationAssertion(Annotation( "AAO:LAP") "Small opening between the centrale and fibulare that allows the perforans tarsi artery to pass from the ventral to the dorsal side of the ankle.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000934") AnnotationAssertion(rdfs:label "foramen perforans tarsi") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete scapular area) AnnotationAssertion(Annotation( "AAO:LAP") "Dorso-lateral portion of the pectoral girdle.") AnnotationAssertion( "UBERON:0006849") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "UBERON:3000935") "pars scapularis") AnnotationAssertion(Annotation( "UBERON:3000935") "scapula et adscapulum") AnnotationAssertion(Annotation( "UBERON:3000935") "scapula-suprascapula area") AnnotationAssertion(Annotation( "UBERON:3000935") "scapulum et episcapulum") AnnotationAssertion( "UBERON:3000935") AnnotationAssertion(rdfs:label "obsolete scapular area") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (zonal element) AnnotationAssertion(Annotation( "AAO:LAP") "All those parts of the pectoral girdle in the central region of the zonal area.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000936") AnnotationAssertion(rdfs:label "zonal element") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (prezonal element) AnnotationAssertion(Annotation( "AAO:LAP") "All those parts of the pectoral girdle that lie anterior to the zonal area.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000937") AnnotationAssertion(rdfs:label "prezonal element") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (postzonal element) AnnotationAssertion(Annotation( "AAO:LAP") "All those parts of the pectoral girdle that lies posterior to the zonal area.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000938") AnnotationAssertion(rdfs:label "postzonal element") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (arciferal girdle) AnnotationAssertion(Annotation( "AAO:LAP") "Pectoral girdle in which the epicoracoid cartilages are elaborated into posteriorly directed epicoracoid horns. Most arciferal pectoral girdles are characterized by fusion of the epicoracoid cartilages in the interclavicle region. Posterior to the clavicles, the epicoracoids usually are free and overlapping.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000941") AnnotationAssertion(rdfs:label "arciferal girdle") SubClassOf( ) # Class: (firmisternal girdle) AnnotationAssertion(Annotation( "AAO:LAP") "Pectoral girdle that lacks epicoracoid horns. The sternum is fused to the pectoral arch, and the epicoracoid cartilages of each half of the girdle are fused to one another. The midzonal length of the girdle is shorter than that of an arciferal girdle, but pre- and postzonal elements tend to be longer.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000942") AnnotationAssertion(rdfs:label "firmisternal girdle") SubClassOf( ) # Class: (pseudofirmisternal girdle) AnnotationAssertion(Annotation( "AAO:LAP") "Modified arciferal pectoral girdle in which the fusion of the epicoracoid cartilages in the interclavicle region is extended posteriorly. Thus, the cartilages no longer overlap freely, and functionally a partially firmisternal condition is created.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000943") AnnotationAssertion(rdfs:label "pseudofirmisternal girdle") SubClassOf( ) # Class: (pseudoarciferal girdle) AnnotationAssertion(Annotation( "AAO:LAP") "Modified firmisternal pectoral girdle in which the epicoracoid cartilages are partly free and overlapping; however, the epicoracoids are fused to one another and the sternum postermodially.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000944") AnnotationAssertion(rdfs:label "pseudoarciferal girdle") SubClassOf( ) # Class: (inscriptional rib) AnnotationAssertion(Annotation( "AAO:LAP") "Three pairs of cartilaginous elements posterior to the sternum that lie in the myosepta of the ventral trunk musculature.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "UBERON:3000945") "abdominal ribs") AnnotationAssertion( "UBERON:3000945") AnnotationAssertion(rdfs:label "inscriptional rib") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (articular process) AnnotationAssertion(Annotation( "AAO:LAP") "Paired processes located on the anterior end of the cricoid cartilage.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "UBERON:3000948") "processus articularis anterior") AnnotationAssertion( "UBERON:3000948") AnnotationAssertion(rdfs:label "articular process") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (os triangulare) AnnotationAssertion(Annotation( "AAO:Francis_1934") "Small, broadly triangular bar of bone lying across the ventral side of the pharynx at the junction of the M. genio-hyoideus and the M. rectus cervicis superficialis.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "UBERON:3000950") "basi-branchial II") AnnotationAssertion(Annotation( "UBERON:3000950") "os thyroideum") AnnotationAssertion(Annotation( "UBERON:3000950") "os triquetum") AnnotationAssertion(Annotation( "UBERON:3000950") "sternum") AnnotationAssertion(Annotation( "UBERON:3000950") "urohyal") AnnotationAssertion( "UBERON:3000950") AnnotationAssertion(rdfs:label "os triangulare") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (anterior radial) AnnotationAssertion(Annotation( "AAO:Francis_1934") "Paired, horn-like processes of basibranchial I that protrude in an antero-dorso-lateral direction, being more or less embedded in the tongue musculature. These elements contitute the hypohyals.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000951") AnnotationAssertion(rdfs:label "anterior radial") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (posterior radial) AnnotationAssertion(Annotation( "AAO:Francis_1934") "Paired, horn-like processes of basibranchial I that protrude in an antero-dorso-lateral direction, being more or less embedded in the tongue musculature. They arise secondarily during metamorphosis, and are therefore not strictly part of the visceral skeleton.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000952") AnnotationAssertion(rdfs:label "posterior radial") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (ceratobranchials II--IV) AnnotationAssertion(Annotation( "AAO:LAP") "Paired bars that articulate with hypobranchial II. Reduction of loss of these elements is common in salamanders.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "UBERON:3000953") "epibranchials") AnnotationAssertion( "UBERON:3000953") AnnotationAssertion(rdfs:label "ceratobranchials II--IV") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (hypobranchial I) AnnotationAssertion(Annotation( "AAO:Francis_1934") "Paired bar that articulates with basibranchial I. It forms the anterior portion of the posterior cornu of the hyoid.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000954") AnnotationAssertion(rdfs:label "hypobranchial I") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (ceratobranchial I) AnnotationAssertion(Annotation( "AAO:Francis_1934") "Paired bar that articulates with, or is fused to, hypobranchial I. It forms the posterior portion of the posterior cornu of the hyoid.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "UBERON:3000955") "epibranchial") AnnotationAssertion( "UBERON:3000955") AnnotationAssertion(rdfs:label "ceratobranchial I") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (hypobranchial II) AnnotationAssertion(Annotation( "AAO:Duellman_and_Trueb_1994") "Paired bar that articulates anteriorly with basibranchial I and posteriorly with ceratobranchials II--IV.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000956") AnnotationAssertion(rdfs:label "hypobranchial II") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete basihyal) AnnotationAssertion(Annotation( "AAO:LAP") "Paired, anterior element that articulates medially with basibranchial I and posterolaterally with the paired hypohyals.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "UBERON:0011614") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000957") AnnotationAssertion(rdfs:label "obsolete basihyal") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (external integument structure) AnnotationAssertion(Annotation( "AAO:EJS"^^xsd:string) "Structures of the dermis, epidermis, glands and pigment cells recognizable on the external surfaces of the integument.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000961") AnnotationAssertion(rdfs:comment "Not clear how this differs from parent class. See https://github.com/obophenotype/uberon/issues/1305") AnnotationAssertion(rdfs:label "external integument structure") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (basale commune (carpal)) AnnotationAssertion(Annotation( "AAO:EJS"^^xsd:string) "Amalgamation of distal carpals 1 and 2.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000965") AnnotationAssertion(rdfs:label "basale commune (carpal)") SubClassOf( ) # Class: (angulosplenial) AnnotationAssertion(Annotation( "AAO:EJS"^^xsd:string) "Dermal bone of anuran lower jaw investing lingual and ventral surfaces of Meckel's cartilage; forming coronoid process and articulating with palatoquadrate posteriorly.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "UBERON:3000966") "angular") AnnotationAssertion(Annotation( "UBERON:3000966") "goniale") AnnotationAssertion( "UBERON:3000966") AnnotationAssertion(rdfs:label "angulosplenial") SubClassOf( ) SubClassOf( ) # Class: (obsolete larval skeletal system) AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000969") AnnotationAssertion(rdfs:comment "redundant with stage+skeletal system. Can be properly reinstated if needed.") AnnotationAssertion(rdfs:label "obsolete larval skeletal system") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (head external integument structure) AnnotationAssertion(Annotation( "AAO:EJS"^^xsd:string) "Dermal, epidermal, glandular and pigment structures of the external head integument.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000972") AnnotationAssertion(rdfs:label "head external integument structure") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (body external integument structure) AnnotationAssertion(Annotation( "AAO:EJS"^^xsd:string) "Dermal, epidermal, glandular and pigment structures of the body integument.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000977") AnnotationAssertion(rdfs:label "body external integument structure") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (limb external integument structure) AnnotationAssertion(Annotation( "AAO:EJS"^^xsd:string) "Dermal, epidermal, glandular and pigment structures of the limb integument.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000981") AnnotationAssertion(rdfs:label "limb external integument structure") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pectoral fold) AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000989") AnnotationAssertion(rdfs:label "pectoral fold") SubClassOf( ) # Class: (dorsal folds) AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000991") AnnotationAssertion(rdfs:label "dorsal folds") SubClassOf( ) # Class: (obsolete principal cavity) AnnotationAssertion(Annotation( "AAO:EJS"^^xsd:string) "The largest part of the nasal cavity, containing the olfactory epithelium.") AnnotationAssertion( "UBERON:3000089") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000992") AnnotationAssertion(rdfs:label "obsolete principal cavity") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (otic and occipital) AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000993") AnnotationAssertion(rdfs:label "otic and occipital") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (longitudinal dorsal folds) AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000994") AnnotationAssertion(rdfs:label "longitudinal dorsal folds") SubClassOf( ) # Class: (transversal dorsal folds) AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000995") AnnotationAssertion(rdfs:label "transversal dorsal folds") SubClassOf( ) # Class: (suprarostral cartilage) AnnotationAssertion(Annotation( "AAO:EJS"^^xsd:string) "Larval upper jaws articulate with trabecular horns.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000998") AnnotationAssertion(rdfs:label "suprarostral cartilage") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (dorsal pouch) AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3000999") AnnotationAssertion(rdfs:label "dorsal pouch") SubClassOf( ) # Class: (obsolete palatoquadrate and suspensorium) AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3001000") AnnotationAssertion(rdfs:label "obsolete palatoquadrate and suspensorium") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete lateral line receptor organ) AnnotationAssertion( "UBERON:0008904") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3001001") AnnotationAssertion(rdfs:label "obsolete lateral line receptor organ") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (basale commune (tarsal)) AnnotationAssertion(Annotation( "AAO:EJS"^^xsd:string) "Amalgamation of distal tarsals 1 and 2.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3001002") AnnotationAssertion(rdfs:label "basale commune (tarsal)") SubClassOf( ) # Class: (cloacal fold) AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3001003") AnnotationAssertion(rdfs:label "cloacal fold") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (dorsolateral fold) AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3001005") AnnotationAssertion(rdfs:label "dorsolateral fold") SubClassOf( ) # Class: (body granules) AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3001007") AnnotationAssertion(rdfs:label "body granules") SubClassOf( ) # Class: (body wart) AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3001008") AnnotationAssertion(rdfs:label "body wart") SubClassOf( ) # Class: (body spicule) AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3001009") AnnotationAssertion(rdfs:label "body spicule") SubClassOf( ) # Class: (body tubercle) AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3001010") AnnotationAssertion(rdfs:label "body tubercle") SubClassOf( ) # Class: (obsolete muscular process) AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010005") AnnotationAssertion(rdfs:label "obsolete muscular process") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (dorsal skin texture) AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010006") AnnotationAssertion(rdfs:label "dorsal skin texture") SubClassOf( ) # Class: (ventral skin texture) AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010010") AnnotationAssertion(rdfs:label "ventral skin texture") SubClassOf( ) # Class: (axillary glands) AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010011") AnnotationAssertion(rdfs:label "axillary glands") SubClassOf( ) # Class: (larval chondrocranium) AnnotationAssertion(Annotation( "AAO:EJS"^^xsd:string) "Cartilaginous larval skull.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010013") AnnotationAssertion(rdfs:label "larval chondrocranium") SubClassOf( ) # Class: (inguinal glands) AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010014") AnnotationAssertion(rdfs:label "inguinal glands") SubClassOf( ) # Class: (M. glutaeus magnus) AnnotationAssertion(Annotation( "AAO:EJS"^^xsd:string) "Originates from the superior process of the ilium and inserts on the aponeuronis of the M. cruralis.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010018") AnnotationAssertion(rdfs:label "M. glutaeus magnus") SubClassOf( ) # Class: (dorsal glands) AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010021") AnnotationAssertion(rdfs:label "dorsal glands") SubClassOf( ) # Class: (M. tensor fasciae latae) AnnotationAssertion(Annotation( "AAO:EJS"^^xsd:string) "Originates on the ventro-lateral aspect of the ala ossis ilei and the ventral surface of the iliacus externus. Inserts on the lateral surface of the cruralis, the dorso-lateral surface of the gluteus magnus, and on the aponeurosis of the cruralis.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010022") AnnotationAssertion(rdfs:label "M. tensor fasciae latae") SubClassOf( ) # Class: (M. sartorius) AnnotationAssertion(Annotation( "AAO:EJS"^^xsd:string) "Originates on the ventral pelvic rim, the pubic region, and the ventral surface of the adductor longus. The insertion bifurcates distally; the ventral portion attaches to the aponeurosis of the cruralis and the dorsal part attaches to the distal attachment of the gracilis major, the semitendinosus, and to the aponeurosis of the cruralis.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010027") AnnotationAssertion(rdfs:label "M. sartorius") SubClassOf( ) # Class: (obsolete gonochoristic organism) AnnotationAssertion(Annotation( "AAO:BJB"^^xsd:string) "Multi-cellular organism that has male and female sexes.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion(Annotation(rdfs:label "gonochoristic organism") "CARO:0000048") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010029") AnnotationAssertion(rdfs:label "obsolete gonochoristic organism") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (ventral glands) AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010031") AnnotationAssertion(rdfs:label "ventral glands") SubClassOf( ) # Class: (M. semitendinosus) AnnotationAssertion(Annotation( "AAO:EJS"^^xsd:string) "Originates by two tendons: one on the postero-ventral aspect of the pelvic rim, the other, a dorsal tendon from the postero-dorsal pelvic rim under the ventral edge of M. semimembranosus. Inserts on the ventral surface of the tibiofibula.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010032") AnnotationAssertion(rdfs:label "M. semitendinosus") SubClassOf( ) # Class: (protandrous hermaphroditic organism) AnnotationAssertion(Annotation( "AAO:BJB"^^xsd:string) "Sequential hermaphroditic organism that produces gametes first of the male sex, and then later of the female sex.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010039") AnnotationAssertion(rdfs:label "protandrous hermaphroditic organism") SubClassOf( ) # Class: (protogynous hermaphroditic organism) AnnotationAssertion(Annotation( "AAO:BJB"^^xsd:string) "Sequential hermaphroditic organism that produces gametes first of the female sex, and then later of the male sex.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010042") AnnotationAssertion(rdfs:label "protogynous hermaphroditic organism") SubClassOf( ) # Class: (dorsal crest) AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010044") AnnotationAssertion(rdfs:label "dorsal crest") SubClassOf( ) # Class: (centrale 1) AnnotationAssertion(Annotation( "AAO:EJS"^^xsd:string) "Distal-most centrale when two are present.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010045") AnnotationAssertion(rdfs:label "centrale 1") SubClassOf( ) SubClassOf( ) # Class: (M. quadratus femoris) AnnotationAssertion(Annotation( "AAO:EJS"^^xsd:string) "Originates on the ventro-lateral border of the ischium and inserts on the ventro-medial surface of the femur at the base of caput femoris.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010047") AnnotationAssertion(rdfs:label "M. quadratus femoris") SubClassOf( ) # Class: (M. gemellus) AnnotationAssertion(Annotation( "AAO:EJS"^^xsd:string) "Originates from the dorso-lateral margin of the ischium and inserts on the medial surface of the femur.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010049") AnnotationAssertion(rdfs:label "M. gemellus") SubClassOf( ) # Class: (centrale (fore)) AnnotationAssertion(Annotation( "AAO:EJS"^^xsd:string) "Rectangular cartilage or bone between the distal basal commune and the proximal intermedium.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010060") AnnotationAssertion(rdfs:label "centrale (fore)") SubClassOf( ) SubClassOf( ) # Class: (M. gracilis major) AnnotationAssertion(Annotation( "AAO:EJS"^^xsd:string) "Originates by a broad tendon from the postero-ventral surface of the pelvic rim and inserts by two tendons. One broad tendon inserts on the knee aponeurosis, and in part on the ventro-medial surface of the tibiofibula. The other long tendon inserts on the posterior surface of the tibiofibula just below the proximal head.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010065") AnnotationAssertion(rdfs:label "M. gracilis major") SubClassOf( ) # Class: (M. gracilis minor) AnnotationAssertion(Annotation( "AAO:EJS"^^xsd:string) "Originates from the pelvic rim just ventral to the anus and merges with M. gracilis major. M. gracilis minor also attaches to the skin.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010067") AnnotationAssertion(rdfs:label "M. gracilis minor") SubClassOf( ) # Class: (M. semimembranosus) AnnotationAssertion(Annotation( "AAO:EJS"^^xsd:string) "Originates on the ventro-lateral surface of the ischium below the anus and inserts on the ventro-medial aspect of the femur and the head of the tibiofibula by a stout tendon, which is formed by the ventral origin of the plantaris longus.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010068") AnnotationAssertion(rdfs:label "M. semimembranosus") SubClassOf( ) # Class: (intermedium (fore)) AnnotationAssertion(Annotation( "AAO:EJS"^^xsd:string) "Quadrangular cartilage or bone lying between the preaxial radiale and the postaxial ulnare in the proximal level of the mesopodium.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010069") AnnotationAssertion(rdfs:label "intermedium (fore)") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (M. ileo-fibularis) AnnotationAssertion(Annotation( "AAO:EJS"^^xsd:string) "Originates from the ventral border of the ala ossis ilei just posterior to the origin of M. glutaeus maximus. Insterts in the aponeurosis covering the knee joint.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010070") AnnotationAssertion(rdfs:label "M. ileo-fibularis") SubClassOf( ) # Class: (cranial crest) AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010071") AnnotationAssertion(rdfs:label "cranial crest") SubClassOf( ) # Class: (M. pyriformis) AnnotationAssertion(Annotation( "AAO:EJS"^^xsd:string) "Originates on the dorso-lateral border of the distal urostyle and inserts on the dorsal surface of the crista femoris. This muscle inserts between the M. ilio-fibularis/M. glutaeus magnus and M. semimembranosus.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010072") AnnotationAssertion(rdfs:label "M. pyriformis") SubClassOf( ) # Class: (centrale 2) AnnotationAssertion(Annotation( "AAO:EJS"^^xsd:string) "The proximal-most rectangular cartilage or bone when two centralelia are present.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010073") AnnotationAssertion(rdfs:label "centrale 2") SubClassOf( ) SubClassOf( ) # Class: (M. ileo-femoralis) AnnotationAssertion(Annotation( "AAO:EJS"^^xsd:string) "Originates from the postero-ventral surface of the ala ossis ilei and from the insertion tendon of M. ileo-fibularis. Inserts along the dorso-medial border of the femur.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010074") AnnotationAssertion(rdfs:label "M. ileo-femoralis") SubClassOf( ) # Class: (tympanic fold) AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010075") AnnotationAssertion(rdfs:label "tympanic fold") SubClassOf( ) # Class: (M. iliacus internus) AnnotationAssertion(Annotation( "AAO:EJS"^^xsd:string) "Muscle originates on the ventral border of the ala ossis ilei to insert on the dorso-medial surface of the femur.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010076") AnnotationAssertion(rdfs:label "M. iliacus internus") SubClassOf( ) # Class: (M. iliacus externus) AnnotationAssertion(Annotation( "AAO:EJS"^^xsd:string) "Originates on the ventral and lateral surfaces of the ala ossis ilei and inserts on the postero-dorsal face of the caput femoris.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010078") AnnotationAssertion(rdfs:label "M. iliacus externus") SubClassOf( ) # Class: (upper eyelid protuberances) AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010079") AnnotationAssertion(rdfs:label "upper eyelid protuberances") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (snout protuberances) AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010080") AnnotationAssertion(rdfs:label "snout protuberances") SubClassOf( ) # Class: (interorbital fold) AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010081") AnnotationAssertion(rdfs:label "interorbital fold") SubClassOf( ) # Class: (M. pulmonum proprius) AnnotationAssertion(Annotation( "AAO:EJS"^^xsd:string) "Originates along the connective tissue covering the dorsal surface of the lung and inserts on the dorsal surface of the femur. Muscle found only in Pipa.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010082") AnnotationAssertion(rdfs:label "M. pulmonum proprius") SubClassOf( ) # Class: (M. tibialis posticus) AnnotationAssertion(Annotation( "AAO:EJS"^^xsd:string) "Originates on the entire medial surface of the shaft of the tibiofibula. Inserts on the tibiale by a long tendon proximo-lateral to the insertion of the medial belly of M. tibialis anticus longus.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010084") AnnotationAssertion(rdfs:label "M. tibialis posticus") SubClassOf( ) # Class: (postrictal protuberances) AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010085") AnnotationAssertion(rdfs:label "postrictal protuberances") SubClassOf( ) # Class: (M. tibialis anticus longus) AnnotationAssertion(Annotation( "AAO:EJS"^^xsd:string) "Originates on the ventro-lateral surface of the medial condyle of the femur. Its tendon extends in a groove over the knee in the lateral surface of the tibiofibular head, and penetrates the M. peroneus tendon. Insertion is by a lateral and medial head on the dorso-lateral surface of the fibulare and the medial border of the proximal end of the tibiale respectively.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010087") AnnotationAssertion(rdfs:label "M. tibialis anticus longus") SubClassOf( ) # Class: (M. extensor cruris brevis) AnnotationAssertion(Annotation( "AAO:EJS"^^xsd:string) "Originates by a slender tendon from the ventral surface of the medial condyle of the femur and passes over the knee to insert as a fleshy belly on the ventro-lateral surface of the tibiofibula.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010089") AnnotationAssertion(rdfs:label "M. extensor cruris brevis") SubClassOf( ) # Class: (M. tibialis anticus brevis) AnnotationAssertion(Annotation( "AAO:EJS"^^xsd:string) "Originates from the dorso-lateral surface of the tibiofibula and inserts on the proximo-medial surface of the tibiale dorsal to the medial head of M. tibialis anticus longus.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010090") AnnotationAssertion(rdfs:label "M. tibialis anticus brevis") SubClassOf( ) # Class: (upper lip protuberances) AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010091") AnnotationAssertion(rdfs:label "upper lip protuberances") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (villosities) AnnotationAssertion(Annotation( ) "Small hair or nipple like projection on the integument.") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010093") AnnotationAssertion(rdfs:label "villosities") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (vocal sac) AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010096") AnnotationAssertion(rdfs:label "vocal sac") SubClassOf( ) # Class: (M. tarsalis posticus) AnnotationAssertion(Annotation( "AAO:EJS"^^xsd:string) "Originates on the medial border of the ligamentum calcanei and inserts along the ventral surface of the tibiale.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010097") AnnotationAssertion(rdfs:label "M. tarsalis posticus") SubClassOf( ) # Class: (M. plantaris profundus) AnnotationAssertion(Annotation( "AAO:EJS"^^xsd:string) "Originates on the medial half of the ligamentum calcanei and inserts along the dorsal surface of the aponeurosis plantaris and extends to the level of the base of the prehallux.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010098") AnnotationAssertion(rdfs:label "M. plantaris profundus") SubClassOf( ) # Class: (obsolete musculus rectus superior) AnnotationAssertion(Annotation( "AAO:EJS"^^xsd:string) "Cranial nerve III innervated; dorsal in the rectus group.") AnnotationAssertion( "UBERON:0006323") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010099") AnnotationAssertion(rdfs:label "obsolete musculus rectus superior") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (mental gland) AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010100") AnnotationAssertion(rdfs:label "mental gland") SubClassOf( ) # Class: (obsolete musculus rectus inferior) AnnotationAssertion(Annotation( "AAO:EJS"^^xsd:string) "Cranial nerve III innervated; ventral in the rectus group.") AnnotationAssertion( "UBERON:0006322") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010101") AnnotationAssertion(rdfs:label "obsolete musculus rectus inferior") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (vocal sac glands) AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010103") AnnotationAssertion(rdfs:label "vocal sac glands") SubClassOf( ) # Class: (pectoral glands) AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010104") AnnotationAssertion(rdfs:label "pectoral glands") SubClassOf( ) # Class: (tympanic papilla) AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010106") AnnotationAssertion(rdfs:label "tympanic papilla") SubClassOf( ) # Class: (obsolete musculus rectus medialis) AnnotationAssertion(Annotation( "AAO:EJS"^^xsd:string) "Cranial nerve III innervated; medial in the rectus group.") AnnotationAssertion( "UBERON:0001602") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010113") AnnotationAssertion(rdfs:label "obsolete musculus rectus medialis") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete lower eyelid texture) AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010116") AnnotationAssertion(rdfs:label "obsolete lower eyelid texture") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete musculus obliquus inferior) AnnotationAssertion(Annotation( "AAO:EJS"^^xsd:string) "Cranial nerve III innverated; ventral in the obliquus group.") AnnotationAssertion( "UBERON:0006320") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010117") AnnotationAssertion(rdfs:label "obsolete musculus obliquus inferior") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (finger fringes) AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010123") AnnotationAssertion(rdfs:label "finger fringes") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (toe fringes) AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010124") AnnotationAssertion(rdfs:label "toe fringes") SubClassOf( ) # Class: (musculus levator bulbi) AnnotationAssertion(Annotation( "AAO:EJS"^^xsd:string) "Cranial nerve V innervated; ventral to the eye.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010125") AnnotationAssertion(rdfs:label "musculus levator bulbi") SubClassOf( ) # Class: (fringe on postaxial edge of finger IV) AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010127") AnnotationAssertion(rdfs:comment "Kok & Castroviejo-Fisher (2008) Zootaxa.") AnnotationAssertion(rdfs:label "fringe on postaxial edge of finger IV") SubClassOf( ) # Class: (taeniae tecti marginalis) AnnotationAssertion(Annotation( "AAO:EJS"^^xsd:string) "Compose lateral rim of frontoparietal fenestra, ventrally confluent with orbital cartilages, posteriorly confluent with tectum synoticum.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010128") AnnotationAssertion(rdfs:label "taeniae tecti marginalis") SubClassOf( ) # Class: (taenia tecti transversalis) AnnotationAssertion(Annotation( "AAO:EJS"^^xsd:string) "Cartilaginous connection that partitions frontoparietal fenestra into anterior and posterior regions. Often persists form larva into adults.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010130") AnnotationAssertion(rdfs:label "taenia tecti transversalis") SubClassOf( ) # Class: (orbital cartilages) AnnotationAssertion(Annotation( "AAO:EJS"^^xsd:string) "Forms lateral walls of braincase, confluent posteriorly with otic capsules via taenia tecti marginalis and anteriorly with lamina orbitonasalis via sphenethmoid commissure.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010131") AnnotationAssertion(rdfs:label "orbital cartilages") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (taenia tecti medialis) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "Cartilaginous connection between the taenia tecti transversalis to the tectum synoticum, and subdividing the parietal fenestra into left and right fenestrae. Often persist from larva to adult.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010132") AnnotationAssertion(rdfs:label "taenia tecti medialis") SubClassOf( ) # Class: (M. cruralis) AnnotationAssertion(Annotation( "AAO:EJS"^^xsd:string) "Originates from the anterior surface of the hip joint capsule between the iliacus internus and the pectineus. Inserts by an aponeurosis attaching to the condyles of the femur and on the head of the cruris. This continues over the cruris to cover the tibialis anticus longus and peroneus to insert on the dorsal surface of those muscles.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010136") AnnotationAssertion(rdfs:label "M. cruralis") SubClassOf( ) # Class: (obsolete trabecular plate) AnnotationAssertion(Annotation( "AAO:EJS"^^xsd:string) "Ventral plate anterior to and confluent with ethmoid plate.") AnnotationAssertion( "UBERON:0011242") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010137") AnnotationAssertion(rdfs:label "obsolete trabecular plate") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (trabecular horn) AnnotationAssertion(Annotation( "AAO:curator") "Anterior extensions.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "UBERON:3010138") "trabecular horns") AnnotationAssertion( "UBERON:3010138") AnnotationAssertion(rdfs:label "trabecular horn") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (occipital arch) AnnotationAssertion(Annotation( "AAO:EJS"^^xsd:string) "Posterior chondrocranium forming ventral and lateral margins of foramen magnum, medial to otic capsules.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010142") AnnotationAssertion(rdfs:label "occipital arch") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (odontoids) AnnotationAssertion(Annotation( "AAO:EJS"^^xsd:string) "Toothlike processes found on the mandible of some anurans; can be formed by dentary or dentary + mentomeckelian bones; odontoids lack enamel and dentine present in true teeth.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010144") AnnotationAssertion(rdfs:label "odontoids") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete otic operculum) AnnotationAssertion(Annotation( "AAO:EJS"^^xsd:string) "Plate of cartilage occluding fenestra ovalis.") AnnotationAssertion( "UBERON:3010728") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010145") AnnotationAssertion(rdfs:label "obsolete otic operculum") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (lacrimal) AnnotationAssertion(Annotation( "AAO:EJS"^^xsd:string) "Investing bone in non-teleosts associated with nasolacrimal duct and lying between pars facialis of maxilla and prefrontal and sometimes nasal.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "UBERON:3010146") "ectethmoid") AnnotationAssertion( "UBERON:3010146") AnnotationAssertion(rdfs:label "lacrimal") SubClassOf( ) # Class: (obsolete middle cavity) AnnotationAssertion( "UBERON:3000087") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010156") AnnotationAssertion(rdfs:label "obsolete middle cavity") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete olfactory receptor cell) AnnotationAssertion( "CL:0000207") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010159") AnnotationAssertion(rdfs:label "obsolete olfactory receptor cell") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete supporting cell) AnnotationAssertion( "CL:0000853") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010160") AnnotationAssertion(rdfs:comment "replaced with 'olfactory epithelium support cell' due to axiom (removed) that it was part of olfactory epithelium.") AnnotationAssertion(rdfs:label "obsolete supporting cell") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete olfactory basal cell) AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010161") AnnotationAssertion(rdfs:comment "Obsoleted as it had no definition or logical axiom beyond being placed as an 'olfactory 'epithelium', which is incorrect for a cell (should be part of). If a definition is found we can rescuscitate this class.[UBERON:cjm]") AnnotationAssertion(rdfs:label "obsolete olfactory basal cell") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (metacarpal fold) AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010163") AnnotationAssertion(rdfs:comment "Kok & Castroviejo-Fisher (2008) Zootaxa.") AnnotationAssertion(rdfs:label "metacarpal fold") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (ulnar fold) AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010164") AnnotationAssertion(rdfs:comment "Kok & Castroviejo-Fisher (2008) Zootaxa.") AnnotationAssertion(rdfs:label "ulnar fold") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (fringe on postaxial edge of toe V) AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010166") AnnotationAssertion(rdfs:comment "Kok & Castroviejo-Fisher (2008) Zootaxa.") AnnotationAssertion(rdfs:label "fringe on postaxial edge of toe V") SubClassOf( ) # Class: (metatarsal fold) AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010167") AnnotationAssertion(rdfs:comment "Kok & Castroviejo-Fisher (2008) Zootaxa.") AnnotationAssertion(rdfs:label "metatarsal fold") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (tarsal fringe) AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010168") AnnotationAssertion(rdfs:comment "Kok & Castroviejo-Fisher (2008) Zootaxa.") AnnotationAssertion(rdfs:label "tarsal fringe") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (ungual flap) AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010170") AnnotationAssertion(rdfs:label "ungual flap") SubClassOf( ) # Class: (subarticular tubercles) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "Is a integumentary structure located on the ventral surface of the hand and/or foot. Found at the junction between, in the hand, the metacarpal and most proximal phalanx of the digit and between phalanges, and in the foot between the metatarsal and most proximal phalanx of the digit and between phalanges.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010172") AnnotationAssertion(rdfs:label "subarticular tubercles") SubClassOf( ) # Class: (supernumerary tubercles) AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010173") AnnotationAssertion(rdfs:label "supernumerary tubercles") SubClassOf( ) # Class: (circumferential groove) AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010175") AnnotationAssertion(rdfs:label "circumferential groove") SubClassOf( ) # Class: (obsolete nuptial pads) AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010177") AnnotationAssertion(rdfs:label "obsolete nuptial pads") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (finger glands) AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010178") AnnotationAssertion(rdfs:label "finger glands") SubClassOf( ) # Class: (web glands) AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010179") AnnotationAssertion(rdfs:label "web glands") SubClassOf( ) # Class: (humeral glands) AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010181") AnnotationAssertion(rdfs:label "humeral glands") SubClassOf( ) # Class: (tibial glands) AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010182") AnnotationAssertion(rdfs:label "tibial glands") SubClassOf( ) # Class: (femoral glands) AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010183") AnnotationAssertion(rdfs:label "femoral glands") SubClassOf( ) # Class: (inner metatarsal tubercle) AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010184") AnnotationAssertion(rdfs:label "inner metatarsal tubercle") SubClassOf( ) # Class: (outer metatarsal tubercle) AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010186") AnnotationAssertion(rdfs:label "outer metatarsal tubercle") SubClassOf( ) # Class: (inner metacarpal tubercle) AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "UBERON:3010187") "thenar tubercle") AnnotationAssertion( "UBERON:3010187") AnnotationAssertion(rdfs:label "inner metacarpal tubercle") SubClassOf( ) # Class: (outer metacarpal tubercle) AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "UBERON:3010188") "palmar tubercle") AnnotationAssertion( "UBERON:3010188") AnnotationAssertion(rdfs:label "outer metacarpal tubercle") SubClassOf( ) # Class: (ulnar protuberances) AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010189") AnnotationAssertion(rdfs:label "ulnar protuberances") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (tibial protuberances) AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010190") AnnotationAssertion(rdfs:label "tibial protuberances") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (calcar anterior) AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010191") AnnotationAssertion(rdfs:label "calcar anterior") SubClassOf( ) # Class: (calcar posterior) AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010192") AnnotationAssertion(rdfs:label "calcar posterior") SubClassOf( ) # Class: (prepollical protuberances) AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010193") AnnotationAssertion(rdfs:label "prepollical protuberances") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (mediale) AnnotationAssertion(Annotation( "AAO:EJS"^^xsd:string) "A recurrent variant of salamanders; a rhomboidal cartilage lying immediately postaxial from the centrale or centrale 1.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010194") AnnotationAssertion(rdfs:label "mediale") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lateral appendix) AnnotationAssertion(Annotation( "AAO:EJS"^^xsd:string) "A small lateral diverticulum of the nasal cavity found in anuran larvae.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010195") AnnotationAssertion(rdfs:label "lateral appendix") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lateral recess) AnnotationAssertion(Annotation( "AAO:EJS"^^xsd:string) "A part of the inferior cavity of the olfactory organ, found in anurans.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010197") AnnotationAssertion(rdfs:label "lateral recess") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (vasculature of respiratory integument) AnnotationAssertion(Annotation( "AAO:EJS"^^xsd:string) "Blood vessels in respiratory skin.") AnnotationAssertion( "Modified from the original AAO source") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010200") AnnotationAssertion(rdfs:label "vasculature of respiratory integument") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (postminimus) AnnotationAssertion(Annotation( "AAO:EJS"^^xsd:string) "A rounded cartilage lying in the postaxial margin of the mesopodium, adjacent to the distal end of the fibulare.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010205") AnnotationAssertion(rdfs:comment "Often consider atavistic when present in extant salamnders (Caudata)") AnnotationAssertion(rdfs:label "postminimus") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (keratinous claw) AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010209") AnnotationAssertion(rdfs:label "keratinous claw") SubClassOf( ) # Class: (obsolete carotid) AnnotationAssertion(Annotation( "AAO:BJB"^^xsd:string) "Either of two arteries which carry blood to the head.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010217") AnnotationAssertion(rdfs:label "obsolete carotid") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete external carotid) AnnotationAssertion(Annotation( "AAO:BJB"^^xsd:string) "An artery which supplies blood to the muscles of the tongue and floor of the mouth via four major branches.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010218") AnnotationAssertion(rdfs:label "obsolete external carotid") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete internal carotid) AnnotationAssertion(Annotation( "AAO:BJB"^^xsd:string) "An artery which supplies the upper jaw and cranium.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010219") AnnotationAssertion(rdfs:label "obsolete internal carotid") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete orbital region) AnnotationAssertion(Annotation( "AAO:EJS"^^xsd:string) "An anatomical cluster that is part of the cranium and structurally supports the eye.") AnnotationAssertion( "UBERON:0001697") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010220") AnnotationAssertion(rdfs:label "obsolete orbital region") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete vertebral) AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "UBERON:0010913") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010224") AnnotationAssertion(rdfs:label "obsolete vertebral") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (postiliac glands) AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010226") AnnotationAssertion(rdfs:label "postiliac glands") SubClassOf( ) # Class: (costal protuberances) AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010227") AnnotationAssertion(rdfs:label "costal protuberances") SubClassOf( ) # Class: (costal grooves) AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010229") AnnotationAssertion(rdfs:label "costal grooves") SubClassOf( ) # Class: (costal folds) AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010231") AnnotationAssertion(rdfs:label "costal folds") SubClassOf( ) # Class: (nuchal groove) AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010235") AnnotationAssertion(rdfs:label "nuchal groove") SubClassOf( ) SubClassOf( ) # Class: (subocular groove) AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010239") AnnotationAssertion(rdfs:label "subocular groove") SubClassOf( ) # Class: (Nobelian rod) AnnotationAssertion(Annotation( ) Annotation( ) Annotation( "AAO:EJS"^^xsd:string) "Either of a pair of cartilaginous rods that support the intromittent organ of male Ascaphus, and are attached to the posteroventral part of the pelvic girdle.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "Nobelian bone") AnnotationAssertion( "Nobelian element") AnnotationAssertion( "UBERON:3010240") AnnotationAssertion(rdfs:label "Nobelian rod") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (labial fold) AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010241") AnnotationAssertion(rdfs:label "labial fold") SubClassOf( ) # Class: (nasolabial groove) AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010242") AnnotationAssertion(rdfs:label "nasolabial groove") SubClassOf( ) SubClassOf( ) # Class: (ventricular musculature) AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010243") AnnotationAssertion(rdfs:label "ventricular musculature") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete spermatocyte) AnnotationAssertion( "CL:0000017") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "UBERON:3010302") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010256") AnnotationAssertion(rdfs:label "obsolete spermatocyte") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (phallodeum) AnnotationAssertion(Annotation( ) "Eversible phalloid portion of the cloaca that is inserted in the female's vent during copulation. Found in male Caecillians.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010259") AnnotationAssertion(rdfs:label "phallodeum") SubClassOf( ) # Class: (intromittent organ (Ascaphus type)) AnnotationAssertion(Annotation( ) "A tail like posterior extension of the cloaca supported by a pair of Nobelian rods.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010260") AnnotationAssertion(rdfs:label "intromittent organ (Ascaphus type)") SubClassOf( ) # Class: (capitulum of radio-ulna) AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010262") AnnotationAssertion(rdfs:label "capitulum of radio-ulna") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete asexual organism) AnnotationAssertion(Annotation( "AAO:BJB"^^xsd:string) "Multi-cellular organism that does not produce gametes.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion(Annotation(rdfs:label "asexual organism") "CARO:0000030") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010272") AnnotationAssertion(rdfs:label "obsolete asexual organism") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete cell space) AnnotationAssertion(Annotation( "AAO:BJB"^^xsd:string) "Anatomical space that is part of a cell.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion(Annotation(rdfs:label "cell space") "CARO:0000062") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010273") AnnotationAssertion(rdfs:label "obsolete cell space") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete epithelial cell) AnnotationAssertion(Annotation( "AAO:BJB"^^xsd:string) "Cell which has as its part a cytoskeleton that allows for tight cell to cell contact and which has apical-basal cell polarity.") AnnotationAssertion( "CL:0000066") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010274") AnnotationAssertion(rdfs:label "obsolete epithelial cell") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete obsolete single cell organism) AnnotationAssertion(Annotation( "AAO:BJB"^^xsd:string) "Cell that is an individual member of a species.") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010275") AnnotationAssertion(rdfs:comment "TO DO: replace with new CARO term.") AnnotationAssertion(rdfs:label "obsolete obsolete single cell organism") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete tip) AnnotationAssertion(Annotation( "AAO:BJB"^^xsd:string) "Anatomical point that is the apex of a projection or anything long and tapered; can be bony or cartilage.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010277") AnnotationAssertion(rdfs:label "obsolete tip") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete animal blastomere) AnnotationAssertion(Annotation( "AAO:BJB"^^xsd:string) "Pigmented, smaller blastomere of the animal (upper) hemisphere of the cleaving embryo.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "UBERON:3010283") "micromere") AnnotationAssertion( "UBERON:3010283") AnnotationAssertion(rdfs:label "obsolete animal blastomere") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete vegetal blastomere) AnnotationAssertion(Annotation( "AAO:BJB"^^xsd:string) "Unpigmented, larger blastomere of the vegetal (lower) hemisphere of the cleaving embryo.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "UBERON:3010284") "macromere") AnnotationAssertion( "UBERON:3010284") AnnotationAssertion(rdfs:label "obsolete vegetal blastomere") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete bottle cell) AnnotationAssertion(Annotation( "AAO:BJB"^^xsd:string) "Cell type that is first to migrate inwards at the blastopore during gastrulation.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010285") AnnotationAssertion(rdfs:comment "replace with CL:0000020 once cl is released.") AnnotationAssertion(rdfs:label "obsolete bottle cell") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete chondrocyte) AnnotationAssertion(Annotation( "AAO:BJB"^^xsd:string) "Polymorphic cell type that forms cartilage.") AnnotationAssertion( "CL:0000138") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010286") AnnotationAssertion(rdfs:label "obsolete chondrocyte") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete ciliated cell) AnnotationAssertion( "CL:0000064") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion(Annotation( "UBERON:3010287") "ciliated cell") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010287") AnnotationAssertion(rdfs:label "obsolete ciliated cell") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete fibroblast) AnnotationAssertion(Annotation( "AAO:BJB"^^xsd:string) "A connective tissue cell that secretes an extracellular matrix rich in collagen and other macromolecules.") AnnotationAssertion( "CL:0000057") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010288") AnnotationAssertion(rdfs:label "obsolete fibroblast") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete follicle cell) AnnotationAssertion( "CL:0000477") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010289") AnnotationAssertion(rdfs:label "obsolete follicle cell") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete germ line cell) AnnotationAssertion( "CL:0000039") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "UBERON:3010290") "germ line cells") AnnotationAssertion( "UBERON:3010290") AnnotationAssertion(rdfs:label "obsolete germ line cell") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete gamete) AnnotationAssertion( "CL:0000300") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010291") AnnotationAssertion(rdfs:label "obsolete gamete") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete germ cell) AnnotationAssertion( "CL:0000586") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion(Annotation( "UBERON:3010292") "germ cells") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010292") AnnotationAssertion(rdfs:label "obsolete germ cell") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete primordial germ cell) AnnotationAssertion(Annotation( "ISBN:0815318960") "Primitive cell type that is involved in the reproduction of the organism beginning with the sexual differentiation of the gonads at NF stage 52. In males specifically, it migrates from the genital ridge cortical region into the medullary tissue, where it forms spermatogonia. In females it is embedded in the cortical region and multiplies as oogonia.") AnnotationAssertion( "CL:0000670") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion(Annotation( "UBERON:3010293") "PGC") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "UBERON:3010293") "primitive germ cell") AnnotationAssertion( "UBERON:3010293") AnnotationAssertion(rdfs:label "obsolete primordial germ cell") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete spermatozoon) AnnotationAssertion(Annotation( "CL:0000019") "A mature male germ cell that develops from a spermatid.") AnnotationAssertion( "CL:0000019") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "UBERON:3010295") "sperm") AnnotationAssertion(Annotation( "UBERON:3010295") "spermatozoa") AnnotationAssertion( "UBERON:3010295") AnnotationAssertion(rdfs:label "obsolete spermatozoon") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete oocyte) AnnotationAssertion( "CL:0000023") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010296") AnnotationAssertion(rdfs:label "obsolete oocyte") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete primary oogonium) AnnotationAssertion(Annotation( "XAO:EJS") "A germ cell that is a primordial oocyte in a female and that develops into secondary oogonia by mitotic division.") AnnotationAssertion( "CL:0000654") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "UBERON:3010297") "primary oogonia") AnnotationAssertion( "UBERON:3010297") AnnotationAssertion(rdfs:label "obsolete primary oogonium") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete primary spermatogonium) AnnotationAssertion(Annotation( "ISSN:0289-0003") "A germ cell that is a primordial spermatocyte in a male and that develops into secondary spermatogonia by mitotic division.") AnnotationAssertion( "CL:0000656") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "UBERON:3010298") "primary spermatogonia") AnnotationAssertion( "UBERON:3010298") AnnotationAssertion(rdfs:label "obsolete primary spermatogonium") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete secondary oogonium) AnnotationAssertion(Annotation( "XAO:EJS") "A type of germ cell that results from the mitotic division of a primary oogonium.") AnnotationAssertion( "CL:0000655") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "UBERON:3010299") "secondary oogonia") AnnotationAssertion( "UBERON:3010299") AnnotationAssertion(rdfs:label "obsolete secondary oogonium") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete secondary spermatogonium) AnnotationAssertion(Annotation( "ISSN:0289-0003") "A type of germ cell that results from the mitotic division of a primary spermatogonium.") AnnotationAssertion( "CL:0000657") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "UBERON:3010300") "secondary spermatogonia") AnnotationAssertion( "UBERON:3010300") AnnotationAssertion(rdfs:label "obsolete secondary spermatogonium") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete spermatid) AnnotationAssertion( "CL:0000018") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010301") AnnotationAssertion(rdfs:label "obsolete spermatid") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (fasciculated network of fibrils) AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion(Annotation( "UBERON:3010303") "coelomic envelope") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010303") AnnotationAssertion(rdfs:label "fasciculated network of fibrils") SubClassOf( ) # Class: (obsolete germinal vesicle) AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion(Annotation( "UBERON:3010305") "GV") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010305") AnnotationAssertion(rdfs:label "obsolete germinal vesicle") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete mitochondrial aggregate) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "A large distinctive organelle aggregate comprised of mitochondria found in developing oocytes of many species. From Pepling et al. 2007.") AnnotationAssertion( "GO:0032019") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "Balbiani body") AnnotationAssertion( "mitochondrial cloud") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010306") AnnotationAssertion(rdfs:label "obsolete mitochondrial aggregate") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete polar body) AnnotationAssertion( "CL:0002090") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010307") AnnotationAssertion(rdfs:label "obsolete polar body") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete lymphocyte) AnnotationAssertion(Annotation( "AAO:BJB"^^xsd:string) "A cell of the B cell, T cell, or natural killer cell lineage.") AnnotationAssertion( "CL:0000542") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010308") AnnotationAssertion(rdfs:label "obsolete lymphocyte") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete B cell) AnnotationAssertion(Annotation( "AAO:BJB"^^xsd:string) "A lymphocyte of B lineage with the phenotype CD19-positive and surface immunoglobulin-positive.") AnnotationAssertion( "CL:0000236") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010309") AnnotationAssertion(rdfs:label "obsolete B cell") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete natural killer cell) AnnotationAssertion(Annotation( "AAO:BJB"^^xsd:string) "A lymphocyte that can spontaneously kill a variety of target cells without prior antigenic activation via germline encoded activation receptors and also regulate immune responses via cytokine release and direct contact with other cells.") AnnotationAssertion( "CL:0000623") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion(Annotation( "UBERON:3010310") "NK cell") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010310") AnnotationAssertion(rdfs:label "obsolete natural killer cell") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete T cell) AnnotationAssertion(Annotation( "AAO:BJB"^^xsd:string) "A type of lymphocyte whose defining characteristic is the expression of a T cell receptor complex.") AnnotationAssertion( "CL:0000084") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010311") AnnotationAssertion(rdfs:label "obsolete T cell") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete thymocyte) AnnotationAssertion(Annotation( "AAO:BJB"^^xsd:string) "An immature T cell located in the thymus.") AnnotationAssertion( "CL:0000893") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010312") AnnotationAssertion(rdfs:label "obsolete thymocyte") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete myoblast) AnnotationAssertion(Annotation( "AAO:BJB"^^xsd:string) "Embryonic (precursor) cell of the myogenic lineage that develops from the mesoderm.") AnnotationAssertion( "CL:0000056") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010313") AnnotationAssertion(rdfs:label "obsolete myoblast") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete abdominal myoblast) AnnotationAssertion(Annotation( "UBERON:3010314") "The myoblast that forms the muscles of the anterior abdominal walls.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "UBERON:3010314") "abdominal musculature") AnnotationAssertion( "UBERON:3010314") AnnotationAssertion(rdfs:label "obsolete abdominal myoblast") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete neuron) AnnotationAssertion(Annotation( "AAO:BJB"^^xsd:string) "Cell that is the basic unit of nervous tissue, each consisting of a body, an axon, and dendrites, and the purpose of which is to receive, conduct, and transmit impulses in the nervous system.") AnnotationAssertion( "CL:0000540") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "UBERON:3010315") "nerve cell") AnnotationAssertion( "UBERON:3010315") AnnotationAssertion(rdfs:label "obsolete neuron") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete pigment cell) AnnotationAssertion(Annotation( "AAO:EJS"^^xsd:string) "Cell type that contains a deposition of coloring matter.") AnnotationAssertion( "CL:0000147") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "UBERON:3010317") "chromatophore") AnnotationAssertion( "UBERON:3010317") AnnotationAssertion(rdfs:label "obsolete pigment cell") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete iridophore) AnnotationAssertion(Annotation( "AAO:BJB"^^xsd:string) "A pigment cell derived from the neural crest. The cell contains flat light-reflecting platelets, probably of guanine, in stacks called reflecting platets or iridisomes. The color-generating components produce a silver, gold, or iridescent color.") AnnotationAssertion( "CL:0000431") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "UBERON:3010318") "guanophore") AnnotationAssertion( "UBERON:3010318") AnnotationAssertion(rdfs:label "obsolete iridophore") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete melanocyte) AnnotationAssertion(Annotation( "AAO:BJB"^^xsd:string) "A pigment cell derived from the neural crest. Contains melanin-filled pigment granules, which gives a brown to black appearance.") AnnotationAssertion( "CL:0000148") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "UBERON:3010319") "melonophore") AnnotationAssertion( "UBERON:3010319") AnnotationAssertion(rdfs:label "obsolete melanocyte") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete xanthophore) AnnotationAssertion(Annotation( "AAO:BJB"^^xsd:string) "A pigment cell derived from the neural crest. Contains cartenoid pigments in structures called pterinosomes or xanthosomes. This gives an appearance ranging from a golden yellow to orange and red.") AnnotationAssertion( "CL:0000430") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010320") AnnotationAssertion(rdfs:label "obsolete xanthophore") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete podocyte) AnnotationAssertion(Annotation( "AAO:BJB"^^xsd:string) "Cell type that is a component of the glomus.") AnnotationAssertion( "CL:0000653") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010321") AnnotationAssertion(rdfs:label "obsolete podocyte") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete stem cell) AnnotationAssertion(Annotation( "AAO:BJB"^^xsd:string) "A relatively undifferentiated cell that retains the ability to divide and proliferate throughout life to provide progenitor cells that can differentiate into specialized cells.") AnnotationAssertion( "CL:0000034") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010322") AnnotationAssertion(rdfs:label "obsolete stem cell") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete hematopoietic stem cell) AnnotationAssertion(Annotation( "AAO:BJB"^^xsd:string) "A stem cell from which all cells of the lymphoid and myeloid lineages develop, including blood cells and cells of the immune system.") AnnotationAssertion( "CL:0000037") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion(Annotation( "UBERON:3010323") "HSC") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010323") AnnotationAssertion(rdfs:comment "false") AnnotationAssertion(rdfs:label "obsolete hematopoietic stem cell") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete zygote) AnnotationAssertion(Annotation( "AAO:BJB"^^xsd:string) "Diploid cell produced by the fusion of sperm cell nucleus and egg cell.") AnnotationAssertion( "CL:0000365") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion(Annotation( "UBERON:3010324") "fertilized egg") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010324") AnnotationAssertion(rdfs:label "obsolete zygote") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete animal hemisphere) AnnotationAssertion( "UBERON:0012284") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "UBERON:3010325") "animal") AnnotationAssertion( "UBERON:3010325") AnnotationAssertion(rdfs:label "obsolete animal hemisphere") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete blastocoel anlage) AnnotationAssertion(Annotation( "XAO:curator") "The first appearance of the antomical space that will become the blastocoel.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010326") AnnotationAssertion(rdfs:label "obsolete blastocoel anlage") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (equatorial belt) AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010328") AnnotationAssertion(rdfs:label "equatorial belt") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete perivitelline space) AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010329") AnnotationAssertion(rdfs:label "obsolete perivitelline space") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete sperm entry point) AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010330") AnnotationAssertion(rdfs:label "obsolete sperm entry point") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete vegetal hemisphere) AnnotationAssertion( "UBERON:0012285") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010331") AnnotationAssertion(rdfs:label "obsolete vegetal hemisphere") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete germ plasm) AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010333") AnnotationAssertion(rdfs:label "obsolete germ plasm") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete vegetal yolk mass) AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010334") AnnotationAssertion(rdfs:label "obsolete vegetal yolk mass") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete globe) AnnotationAssertion( "UBERON:0010230") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion(Annotation( "UBERON:3010346") "eye ball") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010346") AnnotationAssertion(rdfs:label "obsolete globe") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete pigment layer) AnnotationAssertion( "UBERON:0007625") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010350") AnnotationAssertion(rdfs:comment "replaced with pigment epithelium of eye because was previously asserted to be part of a camera-type eye.") AnnotationAssertion(rdfs:label "obsolete pigment layer") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete branchial arch skeleton) AnnotationAssertion(Annotation( ) "Skeletal and cartilaginous elements of the branchial arches; the last five of the set of seven pharyngeal arches; the numbering system can be confusing; generally branchial arch #1 is the first branchial arch, or the third pharyngeal arch, but some authors do not follow this convention.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "UBERON:3010369") "Pharyngeal arch skeleton 3-7>") AnnotationAssertion(Annotation( "UBERON:3010369") "gill arch skeleton") AnnotationAssertion(Annotation( "UBERON:3010369") "visceral arch skeleton") AnnotationAssertion( "UBERON:3010369") AnnotationAssertion(rdfs:label "obsolete branchial arch skeleton") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (unicellular gland) AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010377") AnnotationAssertion(rdfs:label "unicellular gland") SubClassOf( ) # Class: (mesonephric early proximal tubule) AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010392") AnnotationAssertion(rdfs:label "mesonephric early proximal tubule") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (mesonephric late distal segment) AnnotationAssertion(Annotation( "Xenbase") "The site of bicarbonate resorption in the adult kidney. It is equivalent to the convoluted distal segment of metanephric nephrons.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion(Annotation( "UBERON:3010393") "DT1") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010393") AnnotationAssertion(rdfs:label "mesonephric late distal segment") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (mesonephric late proximal tubule) AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion(Annotation( "UBERON:3010394") "PT3") AnnotationAssertion(Annotation( "UBERON:3010394") "late proximal segment") AnnotationAssertion(Annotation( "UBERON:3010394") "proximal tubule 3") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "UBERON:3010394") "opisthonephros") AnnotationAssertion(Annotation( "UBERON:3010394") "proximal straight segment") AnnotationAssertion( "UBERON:3010394") AnnotationAssertion(rdfs:label "mesonephric late proximal tubule") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete follicle layer) AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010398") AnnotationAssertion(rdfs:label "obsolete follicle layer") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (capillary system of liver) AnnotationAssertion(Annotation( "XAO:curator") "The smallest of the blood vessels, parts of the microcirculation, of the liver.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion(Annotation( "UBERON:3010404") "liver capillary") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010404") AnnotationAssertion(rdfs:label "capillary system of liver") SubClassOf( ) SubClassOf( ) # Class: (left channel of ventral aorta) AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010413") AnnotationAssertion(rdfs:label "left channel of ventral aorta") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (posterior palatine artery) AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010417") AnnotationAssertion(rdfs:label "posterior palatine artery") SubClassOf( ) # Class: (larval aorta) AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010423") AnnotationAssertion(rdfs:label "larval aorta") SubClassOf( ) # Class: (right channel of ventral aorta) AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010424") AnnotationAssertion(rdfs:label "right channel of ventral aorta") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete portion of) AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010428") AnnotationAssertion(rdfs:label "obsolete portion of") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (archenteron floor) AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010431") AnnotationAssertion(rdfs:label "archenteron floor") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (archenteron roof) AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion(Annotation( "UBERON:3010432") "gastrocoel roof") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010432") AnnotationAssertion(rdfs:label "archenteron roof") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (blastocoel roof) AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010436") AnnotationAssertion(rdfs:label "blastocoel roof") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (post-anal gut) AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010437") AnnotationAssertion(rdfs:label "post-anal gut") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (M. extensor digitorum communis longus) AnnotationAssertion(Annotation( "AAO:EJS"^^xsd:string) "It arises on the lateral epicondyle of the humerus by two heads: the lateral one arises by a thin tendon in common with the m.extensor carpi ulnaris with fibers proximally fused. The internal one arises by a short tendon in common with proximally fused fibers of the m. extensor carpi radialis. It divides distally in two heads: the external head inserts with a long and thin tendon on the metacarpal V, at the same point of insertion of the m. abductor brevis dorsalis digiti V; the internal one inserts by a thin tendon on the proximal region of the metacarpal IV, between the m. extensor brevis superficialis digiti IV and the m. extensor brevis medius digiti IV (Pristimantis bogotensis).") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010447") AnnotationAssertion(rdfs:label "M. extensor digitorum communis longus") SubClassOf( ) # Class: (dorsal marginal zone) AnnotationAssertion(Annotation( "ASD:BJB") "Marginal zone that is a key embryonic tissue region of the early gastrula stage embryo and that houses the Spemann-Mangold organizer.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion(Annotation( ) "DMZ") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "UBERON:3010449") "Spemann organizer") AnnotationAssertion(Annotation( "UBERON:3010449") "organizer") AnnotationAssertion( "UBERON:3010449") AnnotationAssertion(rdfs:label "dorsal marginal zone") SubClassOf( ) # Class: (dorso-lateral marginal zone) AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010450") AnnotationAssertion(rdfs:label "dorso-lateral marginal zone") SubClassOf( ) # Class: (involuting marginal zone) AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010451") AnnotationAssertion(rdfs:label "involuting marginal zone") SubClassOf( ) # Class: (non-involuting marginal zone) AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010452") AnnotationAssertion(rdfs:label "non-involuting marginal zone") SubClassOf( ) # Class: (ventral marginal zone) AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion(Annotation( "UBERON:3010453") "VMZ") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010453") AnnotationAssertion(rdfs:label "ventral marginal zone") SubClassOf( ) # Class: (ventro-lateral marginal zone) AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010454") AnnotationAssertion(rdfs:label "ventro-lateral marginal zone") SubClassOf( ) # Class: (blastopore lip) AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010455") AnnotationAssertion(rdfs:label "blastopore lip") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lower blastopore lip) AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "UBERON:3010456") "ventral blastopore lip") AnnotationAssertion( "UBERON:3010456") AnnotationAssertion(rdfs:label "lower blastopore lip") SubClassOf( ) # Class: (upper blastopore lip) AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "UBERON:3010457") "dorsal blastopore lip") AnnotationAssertion(Annotation( "UBERON:3010457") "organizer") AnnotationAssertion( "UBERON:3010457") AnnotationAssertion(rdfs:label "upper blastopore lip") SubClassOf( ) # Class: (suprarostral ala) AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "ala") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "alae") AnnotationAssertion( "UBERON:3010458") AnnotationAssertion(rdfs:label "suprarostral ala") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (animal cap) AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "UBERON:3010463") "animal ectoderm") AnnotationAssertion( "UBERON:3010463") AnnotationAssertion(rdfs:label "animal cap") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (animal cap inner layer) AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010464") AnnotationAssertion(rdfs:label "animal cap inner layer") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (animal cap outer layer) AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010465") AnnotationAssertion(rdfs:label "animal cap outer layer") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (muscular artery) AnnotationAssertion(Annotation( "AAO:BJB"^^xsd:string) "Part of the external carotid which delivers blood to the mm rectus cervicis and interhyoideus posterior.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010489") AnnotationAssertion(rdfs:label "muscular artery") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lateral pretrosal artery) AnnotationAssertion(Annotation( "AAO:BJB"^^xsd:string) "Part of the internal carotid which supplies blood to the ear and branches to two additional arteries.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010494") AnnotationAssertion(rdfs:label "lateral pretrosal artery") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (mandibular artery) AnnotationAssertion(Annotation( "AAO:BJB"^^xsd:string) "Part of lateral pretrosal artery which supplies blood to the roof of the mouth.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010496") AnnotationAssertion(rdfs:label "mandibular artery") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (cutaneus artery) AnnotationAssertion(Annotation( "AAO:BJB"^^xsd:string) "Artery which supplies blood to the thymus and parotoid region.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010498") AnnotationAssertion(rdfs:label "cutaneus artery") SubClassOf( ) # Class: (coeliaco-mesenteric artery) AnnotationAssertion(Annotation( "AAO:BJB"^^xsd:string) "This artery has many branches which supply blood to various organs in the viscus.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010499") AnnotationAssertion(rdfs:label "coeliaco-mesenteric artery") SubClassOf( ) # Class: (gastrico-linealis) AnnotationAssertion(Annotation( "AAO:BJB"^^xsd:string) "Major branch which supplies blood to the spleen and dorsal wall of the stomach.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010500") AnnotationAssertion(rdfs:label "gastrico-linealis") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (duodeno-pancreatic artery) AnnotationAssertion(Annotation( "AAO:BJB"^^xsd:string) "Major branch which supplies blood to pancreas and duodenum.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010501") AnnotationAssertion(rdfs:label "duodeno-pancreatic artery") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (duodeno-hepatic artery) AnnotationAssertion(Annotation( "AAO:BJB"^^xsd:string) "Major branch supplying blood via many smaller branches to the liver, duodenum, ventral wall of the stomach, and gall bladder.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010502") AnnotationAssertion(rdfs:label "duodeno-hepatic artery") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (oviduct artery) AnnotationAssertion(Annotation( "AAO:BJB"^^xsd:string) "One of three arteries which are part of the renal artery supplying blood to the anterior, middle, and posterior parts of the oviduct.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010503") AnnotationAssertion(rdfs:label "oviduct artery") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (postcaval vein) AnnotationAssertion(Annotation( "AAO:BJB"^^xsd:string) "One of three major veins which enter the sinus venosus.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010506") AnnotationAssertion(rdfs:label "postcaval vein") SubClassOf( ) # Class: (precaval vein) AnnotationAssertion(Annotation( "AAO:BJB"^^xsd:string) "Either of a pair of veins which enter on either side of the sinus venosus.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010507") AnnotationAssertion(rdfs:label "precaval vein") SubClassOf( ) # Class: (lateral vein) AnnotationAssertion(Annotation( "AAO:BJB"^^xsd:string) "Either of the veins which collect blood from the trunk and skin and drain into the subclavian vein.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010515") AnnotationAssertion(rdfs:label "lateral vein") SubClassOf( ) # Class: (cutaneus magnus) AnnotationAssertion(Annotation( "AAO:BJB"^^xsd:string) "Anterior part of the lateral vein.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010516") AnnotationAssertion(rdfs:label "cutaneus magnus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (ventral abdominal vein) AnnotationAssertion(Annotation( "AAO:BJB"^^xsd:string) "A vein formed by the combination of veins in the pelvic region which collects blood from the liver, stomach, intestines, and gall bladder.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010517") AnnotationAssertion(rdfs:label "ventral abdominal vein") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (M. plantaris longus) AnnotationAssertion(Annotation( "AAO:EJS"^^xsd:string) "Originates by two heads, one from the dorso-distal border of the aponeurosis covering the knee and the other from two tendinous branches along the medial border of the knee joint. Inserts by a thick, broad tendon to form the aponeurosis plantaris.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010523") AnnotationAssertion(rdfs:label "M. plantaris longus") SubClassOf( ) # Class: (bronchial tube) AnnotationAssertion(Annotation( "AAO:BJB"^^xsd:string) "Either of the short tubes which bifurcate posteriorly from the trachea and lead into the lungs.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010524") AnnotationAssertion(rdfs:label "bronchial tube") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (frontoparietal fenestra) AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010525") AnnotationAssertion(rdfs:label "frontoparietal fenestra") SubClassOf( ) # Class: (ovisac) AnnotationAssertion(Annotation( "AAO:BJB"^^xsd:string) "Part of the ovary consisting of a thin sheath of connective tissue enclosing the ovarian follicles.") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "UBERON:3010782") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010529") AnnotationAssertion(rdfs:label "ovisac") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete mesorchium) AnnotationAssertion(Annotation( "AAO:BJB"^^xsd:string) "A thin membrane which attaches the testes to the kidneys and supports the efferent ductules from the testes to the kidneys.") AnnotationAssertion( "UBERON:0011879") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010530") AnnotationAssertion(rdfs:label "obsolete mesorchium") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete pars nervosa) AnnotationAssertion(Annotation( "AAO:BJB"^^xsd:string) "Region of the neurohypophysis which secretes neurohypophyseal hormones, regulating water loss and salt balance.") AnnotationAssertion( "UBERON:0003217") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010538") AnnotationAssertion(rdfs:label "obsolete pars nervosa") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (median pars intermedia) AnnotationAssertion(Annotation( "AAO:BJB"^^xsd:string) "Region of the adenohypophysis which secretes melanophore-stimulating hormone, affecting the integumentary chromatophores.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010541") AnnotationAssertion(rdfs:label "median pars intermedia") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete bilateral pars tuberalis) AnnotationAssertion( "UBERON:0002433") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010543") AnnotationAssertion(rdfs:label "obsolete bilateral pars tuberalis") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete gastrula cell) AnnotationAssertion(Annotation( "AAO:BJB"^^xsd:string) "A cell of the embryo in the early stage following the blastula, characterized by morphogenetic cell movements, cell differentiation, and the formation of the three germ layers.") AnnotationAssertion( "CL:0000361") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010552") AnnotationAssertion(rdfs:label "obsolete gastrula cell") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete blastoderm cell) AnnotationAssertion(Annotation( "AAO:BJB"^^xsd:string) "An undifferentiated cell produced by early cleavages of the fertilized egg (zygote).") AnnotationAssertion( "CL:0000353") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010553") AnnotationAssertion(rdfs:label "obsolete blastoderm cell") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete ectodermal cell) AnnotationAssertion(Annotation( "AAO:BJB"^^xsd:string) "A cell of the outer of the three germ layers of the embryo.") AnnotationAssertion( "CL:0000221") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "UBERON:3010554") "ectoderm cell") AnnotationAssertion( "UBERON:3010554") AnnotationAssertion(rdfs:label "obsolete ectodermal cell") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete endodermal cell) AnnotationAssertion(Annotation( "AAO:BJB"^^xsd:string) "A cell of the inner of the three germ layers of the embryo.") AnnotationAssertion( "CL:0000223") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "UBERON:3010555") "endoderm cell") AnnotationAssertion( "UBERON:3010555") AnnotationAssertion(rdfs:label "obsolete endodermal cell") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete mesodermal cell) AnnotationAssertion(Annotation( "AAO:BJB"^^xsd:string) "A cell of the middle germ layer of the embryo.") AnnotationAssertion( "CL:0000222") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "UBERON:3010556") "mesoblast") AnnotationAssertion(Annotation( "UBERON:3010556") "mesoderm cell") AnnotationAssertion( "UBERON:3010556") AnnotationAssertion(rdfs:label "obsolete mesodermal cell") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (triangular process) AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010557") AnnotationAssertion(rdfs:label "triangular process") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (quadrato-ethmoid ligament) AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010558") AnnotationAssertion(rdfs:label "quadrato-ethmoid ligament") SubClassOf( ) # Class: (suboccular foramen) AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010562") AnnotationAssertion(rdfs:label "suboccular foramen") SubClassOf( ) # Class: (craniopalatine foramen) AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010563") AnnotationAssertion(rdfs:label "craniopalatine foramen") SubClassOf( ) # Class: (carotid foramen) AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010564") AnnotationAssertion(rdfs:label "carotid foramen") SubClassOf( ) # Class: (pila preoptica) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "A strut of cartilage extending dorsally from the basal plate and with other similar cartilages forming the sides of the brain case. Posterior to the pila preoptica is the pila antoptica between these two cartilages emerges the optic and trochlear nerves.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010565") AnnotationAssertion(rdfs:label "pila preoptica") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (prootic foramen) AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010566") AnnotationAssertion(rdfs:label "prootic foramen") SubClassOf( ) # Class: (prenasal (amphibians)) AnnotationAssertion(Annotation( "AAO:LT") "A dermal bone that forms anterior to the premaxillae between the maxillae and articulates with the nasals posteriorly.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010576") AnnotationAssertion(rdfs:label "prenasal (amphibians)") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (basibranchial I) AnnotationAssertion(Annotation( "AAO:DBW") "Bilaterally unpaired ventral element with which articulates with lateral paired elements.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "UBERON:3010583") "Copula I") AnnotationAssertion( "UBERON:3010583") AnnotationAssertion(rdfs:label "basibranchial I") SubClassOf( ) # Class: (mandibular arch neural crest) AnnotationAssertion(Annotation( "AAO:EJS"^^xsd:string) "Anterior most migratory stream of cranial neural crest.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010584") AnnotationAssertion(rdfs:label "mandibular arch neural crest") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (basibranchial II) AnnotationAssertion(Annotation( "AAO:EJS"^^xsd:string) "Unpaired medial element that articulates with the anterior basibrachial I (if present).") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "UBERON:3010585") "Copula II") AnnotationAssertion(Annotation( "UBERON:3010585") "urohyal") AnnotationAssertion( "UBERON:3010585") AnnotationAssertion(rdfs:label "basibranchial II") SubClassOf( ) # Class: (vasa efferentia) AnnotationAssertion(Annotation( "AAO:BMZ") "Sperm travel through these 4 or 5 fine ducts which pass through the mesorchium from the testis to the sexual kidney.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010586") AnnotationAssertion(rdfs:label "vasa efferentia") SubClassOf( ) # Class: (hyoid arch neural crest) AnnotationAssertion(Annotation( "AAO:EJS"^^xsd:string) "Population of cranial neural crest that give rise to hyoid arch elements.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010587") AnnotationAssertion(rdfs:label "hyoid arch neural crest") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (cloacal papilla) AnnotationAssertion(Annotation( "AAO:BMZ") "A small, ridge-like projection from the antero-ventral wall of the cloacal chamber.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010589") AnnotationAssertion(rdfs:label "cloacal papilla") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (amphibian cloacal gland) AnnotationAssertion(Annotation( "AAO:BMZ") "A structure that surrounds the cloacal opening, consisting of a mass of coarse tubules.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010590") AnnotationAssertion(rdfs:label "amphibian cloacal gland") SubClassOf( ) # Class: (obsolete erythrophore) AnnotationAssertion( "CL:0000574") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010593") AnnotationAssertion(rdfs:comment "Note that this class originally had axiom that it was part of the integument. However, the term had no definition and one can use the general erythrophore def from CL.") AnnotationAssertion(rdfs:label "obsolete erythrophore") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (stratum spongiosum) AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010599") AnnotationAssertion(rdfs:label "stratum spongiosum") SubClassOf( ) # Class: (granular gland) AnnotationAssertion(Annotation( "ISBN10:0073040584") Annotation( "UBERON:cjm"^^xsd:string) "A gland that contains toxic secretions within the lumen. In frogs and salamanders, this is the larger of the two types of gland, the other being the mucuous gland[Kardong].") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion(Annotation( "ISBN10:0073040584") Annotation( "UBERON:cjm"^^xsd:string) "poison gland") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010602") AnnotationAssertion(rdfs:label "granular gland") SubClassOf( ) # Class: (body gland) AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010603") AnnotationAssertion(rdfs:label "body gland") SubClassOf( ) # Class: (cranial glands) AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010604") AnnotationAssertion(rdfs:label "cranial glands") SubClassOf( ) # Class: (limb gland) AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010606") AnnotationAssertion(rdfs:label "limb gland") SubClassOf( ) # Class: (obsolete sensory receptors) AnnotationAssertion( "UBERON:0012451") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010612") AnnotationAssertion(rdfs:label "obsolete sensory receptors") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (laryngo-tracheal chamber) AnnotationAssertion(Annotation( "AAO:BMZ") "Muscular vestibule between the pharynx and lungs, lying between the posterior cornua of the hyoid.") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010613") AnnotationAssertion(rdfs:label "laryngo-tracheal chamber") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (cartilago lateralis of aryngo-tracheal chamber) AnnotationAssertion(Annotation( "AAO:BMZ") "A series of semicircular cartilages on the side of the laryngo-tracheal chamber.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "cartilago lateralis") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010614") AnnotationAssertion(rdfs:label "cartilago lateralis of aryngo-tracheal chamber") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (constrictor laryngis externus) AnnotationAssertion(Annotation( "AAO:BMZ") "Involved in the movement of the arytenoid cartilages; see also dilatator laryngis and constrictor laryngis anterior.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "UBERON:3010618") "hyolaryngus") AnnotationAssertion(Annotation( "UBERON:3010618") "sphincter anterior") AnnotationAssertion( "UBERON:3010618") AnnotationAssertion(rdfs:label "constrictor laryngis externus") SubClassOf( ) # Class: (dilatator laryngis) AnnotationAssertion(Annotation( "AAO:BMZ") "Involved in the movement of the arytenoid cartilages; see also constrictor laryngis externus and constrictor laryngis anterior.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010620") AnnotationAssertion(rdfs:label "dilatator laryngis") SubClassOf( ) SubClassOf(Annotation( "cjm"^^xsd:string) ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (constrictor laryngis anterior) AnnotationAssertion(Annotation( "AAO:BMZ") "Involved in the movement of the arytenoid cartilages; see also constrictor laryngis externus and dilatator laryngis.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "UBERON:3010621") "sphincter posterior") AnnotationAssertion( "UBERON:3010621") AnnotationAssertion(rdfs:label "constrictor laryngis anterior") SubClassOf( ) # Class: (subarticular sesamoid) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "Is an endochondral structure located on the ventral to the junction between, in the hand, the metacarpal and most proximal phalanx of the digit and between phalanges, and in the foot between the metatarsal and most proximal phalanx of the digit and between phalanges. Typically subarticular sesamoids are found with the subarticular tubercles.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "UBERON:3010674") AnnotationAssertion( "uberon") AnnotationAssertion( "subarticular sesamoids") AnnotationAssertion( "UBERON:3010624") AnnotationAssertion(rdfs:comment "to edit more later") AnnotationAssertion(rdfs:label "subarticular sesamoid") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete embryonic hypochord) AnnotationAssertion(Annotation( "AAO:EJS"^^xsd:string) "A transient rod-like structure ventral to the notochord in salamander embryos. Derived from endoderm.") AnnotationAssertion( "UBERON:0003058") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010625") AnnotationAssertion(rdfs:label "obsolete embryonic hypochord") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete Merkel cell) AnnotationAssertion( "CL:0000242") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "UBERON:3010626") "Merkel cells") AnnotationAssertion( "UBERON:3010626") AnnotationAssertion(rdfs:label "obsolete Merkel cell") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete leydig cells) AnnotationAssertion(Annotation( "AAO:BMZ") "A type of mucus and/or fluid secreting cell in larvae.") AnnotationAssertion( "CL:0000178") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010627") AnnotationAssertion(rdfs:label "obsolete leydig cells") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete dorsal ramus of occulomotor nerve) AnnotationAssertion(Annotation( "AAO:EJS"^^xsd:string) "Innervates m. rectus superior (m. dorsal rectus).") AnnotationAssertion( "UBERON:0015162") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010628") AnnotationAssertion(rdfs:label "obsolete dorsal ramus of occulomotor nerve") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete sesamoid) AnnotationAssertion( "UBERON:0001479") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "UBERON:3010630") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010629") AnnotationAssertion(rdfs:label "obsolete sesamoid") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete Stiftchenzellen) AnnotationAssertion(Annotation( "AAO:BMZ") "Possibly chemoreceptor cells in anuran larvae.") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010631") AnnotationAssertion(rdfs:comment "replace with CL_0007017 once CL is released.") AnnotationAssertion(rdfs:label "obsolete Stiftchenzellen") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete ventral ramus of occulomotor nerve) AnnotationAssertion(Annotation( "AAO:DSM") "Innervates m. rectus medialis, m. rectus inferior, m. obliquus inferior.") AnnotationAssertion( "UBERON:0015161") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010632") AnnotationAssertion(rdfs:label "obsolete ventral ramus of occulomotor nerve") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete flask cell) AnnotationAssertion(Annotation( "AAO:BMZ") "Type of cell that appears in epidermis during metamorphosis and is rich in mitochondria.") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010633") AnnotationAssertion(rdfs:comment "replaced by CL_0007023 once cl is released.") AnnotationAssertion(rdfs:label "obsolete flask cell") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete goblet cell) AnnotationAssertion(Annotation( "AAO:BMZ") "A mucous surface cell type known in tadpoles of Xenopus.") AnnotationAssertion( "CL:0000160") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010635") AnnotationAssertion(rdfs:label "obsolete goblet cell") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete mucous surface cell) AnnotationAssertion(Annotation( "AAO:BMZ") "Type of mucous-producing cell that appears in early larval stages and persists after metamorphosis.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010637") AnnotationAssertion(rdfs:comment "replace with CL_0007019 once cl is released.") AnnotationAssertion(rdfs:label "obsolete mucous surface cell") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete ciliary cell) AnnotationAssertion(Annotation( "AAO:BMZ") "A type of cell that develops in embryos and functions in embryonic movements.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "UBERON:3010638") "ciliary cells") AnnotationAssertion( "UBERON:3010638") AnnotationAssertion(rdfs:comment "replace with CL_0007018 once cl is released.") AnnotationAssertion(rdfs:label "obsolete ciliary cell") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (cephalodorsosubpharyngeus) AnnotationAssertion(Annotation( "AAO:BMZ") "Hyobranchial muscle used in swallowing.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010650") AnnotationAssertion(rdfs:label "cephalodorsosubpharyngeus") SubClassOf( ) SubClassOf(Annotation( "cjm"^^xsd:string) ObjectSomeValuesFrom( )) # Class: (levator bulbi) AnnotationAssertion(Annotation( "AAO:BMZ") "One of the principal muscles used in swallowing.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010651") AnnotationAssertion(rdfs:label "levator bulbi") SubClassOf( ) # Class: (ramus nasalis lateralis) AnnotationAssertion(Annotation( "AAO:EJS"^^xsd:string) "Ramule of ophthalmic nerve (see also ramus nasalis medialis). The first branch of ophthalmic nerve gives rise to two ramules that border the naris and innervate the surrounding tissue.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010652") AnnotationAssertion(rdfs:label "ramus nasalis lateralis") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (ramus nasalis medialis) AnnotationAssertion(Annotation( "AAO:EJS"^^xsd:string) "Ramule of ophthalmic nerve (see also ramus nasalis lateralis). First branch gives rise to two ramules that border the naris and innervate the surrounding tissue.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010653") AnnotationAssertion(rdfs:label "ramus nasalis medialis") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (rectus cervicis) AnnotationAssertion(Annotation( "AAO:BMZ") "Retracts the hyoid and, therefore, the tongue.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010654") AnnotationAssertion(rdfs:label "rectus cervicis") SubClassOf( ) # Class: (subhyoideus) AnnotationAssertion(Annotation( "AAO:BMZ") "Hyobranchial muscle that is a deep, visceral muscle associated with tongue movement.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010657") AnnotationAssertion(rdfs:label "subhyoideus") SubClassOf( ) # Class: (subarcualis rectus I) AnnotationAssertion(Annotation( "AAO:BMZ") "Deep, visceral muscle associated with tongue movement.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010659") AnnotationAssertion(rdfs:label "subarcualis rectus I") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (ramus nasalis internus) AnnotationAssertion(Annotation( "AAO:EJS"^^xsd:string) "Distal part of the opthalmicus profundus gives rise to 2 ramules: palatinus and cutaneous.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010661") AnnotationAssertion(rdfs:label "ramus nasalis internus") SubClassOf( ) # Class: (m. intertransversarius capitus superior) AnnotationAssertion(Annotation( "AAO:BMZ") "Muscle of the neck involved in the movement of the head, see also m. intertransversarius capitis inferior.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010664") AnnotationAssertion(rdfs:label "m. intertransversarius capitus superior") SubClassOf( ) # Class: (ramule palatinus) AnnotationAssertion(Annotation( "AAO:EJS"^^xsd:string) "Ramules that descends towards the buccal roof and give rise to several short branches that anastomose with palatine ramus of the facial nerve.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010665") AnnotationAssertion(rdfs:label "ramule palatinus") SubClassOf( ) # Class: (m. intertransversarius capitis inferior) AnnotationAssertion(Annotation( "AAO:BMZ") "Muscle of the neck involved in the movement of the head, see also m. intertransversarius capitis superior.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010667") AnnotationAssertion(rdfs:label "m. intertransversarius capitis inferior") SubClassOf( ) # Class: (ramules cutaneous) AnnotationAssertion(Annotation( "AAO:EJS"^^xsd:string) "Many branches of the maxillary ramus that terminate in the integument of the maxillary region.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "UBERON:3010672") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010668") AnnotationAssertion(rdfs:label "ramules cutaneous") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (trunk maxillary-mandibularis) AnnotationAssertion(Annotation( "AAO:EJS"^^xsd:string) "Portion of the trigeminal nerve where the maxillary and mandibular rami run together prior to bifurcating.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010669") AnnotationAssertion(rdfs:label "trunk maxillary-mandibularis") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (ramule palatonasalis) AnnotationAssertion(Annotation( "AAO:EJS"^^xsd:string) "Descends and branches to the buccal roof where it anastomoses with the palatine ramus of the facial nerve.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010671") AnnotationAssertion(rdfs:label "ramule palatonasalis") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (m. rhomboideus anterior) AnnotationAssertion(Annotation( "AAO:MEJ") "Muscle which originates on the posterior surface of the frontoparietal and the anterior part of the dorsal fascia. Inserts on the ventral surface of the anteromedial corner of the suprascapula.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010673") AnnotationAssertion(rdfs:label "m. rhomboideus anterior") SubClassOf( ) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (bony nodule of terminal phalanx of hind digit) AnnotationAssertion(Annotation( "AAO:EJS"^^xsd:string) "Endochondral element distal to terminal phalanx of hind digit.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "bony nodule") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010675") AnnotationAssertion(rdfs:label "bony nodule of terminal phalanx of hind digit") SubClassOf( ) # Class: (proximal-most prepollical element) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "Is the proximal-most prepollical element.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010682") AnnotationAssertion(rdfs:label "proximal-most prepollical element") SubClassOf( ) # Class: (distal-most prepollical element) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "Is the distal-most prepollical element.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010683") AnnotationAssertion(rdfs:label "distal-most prepollical element") SubClassOf( ) # Class: (proximal-most prehallical element) AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010684") AnnotationAssertion(rdfs:label "proximal-most prehallical element") SubClassOf( ) # Class: (distal-most prehallical element) AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010685") AnnotationAssertion(rdfs:label "distal-most prehallical element") SubClassOf( ) # Class: (fetal tooth) AnnotationAssertion(Annotation( "AAO:HM") "Type of deciduous dentition found in foetuses and altricial juveniles of some caecilians.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion(Annotation( "UBERON:3010690") "fetal teeth") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010690") AnnotationAssertion(rdfs:label "fetal tooth") SubClassOf( ) # Class: (m. opercularis) AnnotationAssertion(Annotation( "AAO:MEJ") "Muscle which arises from the dorsal m. levator scapulae and extends between the operculum and suprascapula.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010691") AnnotationAssertion(rdfs:label "m. opercularis") SubClassOf( ) # Class: (m. cucullaris) AnnotationAssertion(Annotation( "AAO:MEJ") "Muscle which originates on the prootic and the otic ramus of the squamosal and inserts on the anterior border of the suprascapula.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010692") AnnotationAssertion(rdfs:label "m. cucullaris") SubClassOf( ) # Class: (ramus posterior profundus of V3) AnnotationAssertion(Annotation( "AAO:EJS"^^xsd:string) "In the adult anuran, this innervates the muscles levator mandibulare internus and longus.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010693") AnnotationAssertion(rdfs:label "ramus posterior profundus of V3") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (m. rhomboideus posterior) AnnotationAssertion(Annotation( "AAO:MEJ") "Muscle which originates from the transverse process of presacral vertebrae IV and insert on the dorso-medial surface of the suprascapula.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010694") AnnotationAssertion(rdfs:label "m. rhomboideus posterior") SubClassOf( ) # Class: (m. serratus superior) AnnotationAssertion(Annotation( "AAO:MEJ") "Muscle which originates from the transverse process of presacral vertebrae IV and inserts on the dorso-medial surface of the suprascapula beneath the insertion M. rhomboideus posterior.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010695") AnnotationAssertion(rdfs:label "m. serratus superior") SubClassOf( ) # Class: (m. serratus medius) AnnotationAssertion(Annotation( "AAO:MEJ") "Muscle which originates from the transverse process of presacral vertebrae III and inserts on the central and medial surface of the suprascapula.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010698") AnnotationAssertion(rdfs:label "m. serratus medius") SubClassOf( ) # Class: (m. serratus inferior) AnnotationAssertion(Annotation( "AAO:MEJ") "Muscle which originates as a posterior and anterior head. The posterior head originates from the transverse process and cartilaginous epiphysis of presacral vertebra IV. The anterior head originates on the same parts of presacral vertebrae III. Both insert on the medial surface of the suprascapula near its postero-ventral edge.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010699") AnnotationAssertion(rdfs:label "m. serratus inferior") SubClassOf( ) # Class: (levator mandibulae externus) AnnotationAssertion(Annotation( "AAO:BMZ") "Jaw muscle responsible for the closing of the jaw, and innervated by the mandibular nerve.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010700") AnnotationAssertion(rdfs:label "levator mandibulae externus") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (m. latissimus dorsi) AnnotationAssertion(Annotation( "AAO:MEJ") "Muscle which originates from the ventral surface of the dorsal fascia and inserts on the deltoid crest of the humerus.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010701") AnnotationAssertion(rdfs:label "m. latissimus dorsi") SubClassOf( ) # Class: (levator mandibulae longus) AnnotationAssertion(Annotation( "AAO:BMZ") "Jaw muscle responsible for the closing of the jaw, and innvervated by ramus posterior profundus of V3.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010704") AnnotationAssertion(rdfs:label "levator mandibulae longus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete lateral line receptor) AnnotationAssertion( "UBERON:0008904") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010705") AnnotationAssertion(rdfs:label "obsolete lateral line receptor") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (m. dorsalis scapulae) AnnotationAssertion(Annotation( "AAO:MEJ") "Muscle which originates on the lateral surface of the suprascapulae and inserts on the deltoid crest of the humerus.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010707") AnnotationAssertion(rdfs:label "m. dorsalis scapulae") SubClassOf( ) # Class: (levator mandibulae articularis) AnnotationAssertion(Annotation( "AAO:BMZ") "Muscle which is responsible for the closing of the jaw, and is innervated by mandibular nerve.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "UBERON:3010708") "m. adductor mandibulae anterior articularis") AnnotationAssertion(Annotation( "UBERON:3010708") "m. adductor mandibulae externus minor") AnnotationAssertion(Annotation( "UBERON:3010708") "m. adductor mandibulae posterior") AnnotationAssertion(Annotation( "UBERON:3010708") "m. adductor mandibulae posterior articularis") AnnotationAssertion( "UBERON:3010708") AnnotationAssertion(rdfs:label "levator mandibulae articularis") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (levator mandibulae lateralis) AnnotationAssertion(Annotation( "AAO:BMZ") "Responsible for the closing of the jaw, and innvervated by the mandibular nerve.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "UBERON:3010709") "m. adductor mandibulae posterior articularis") AnnotationAssertion( "UBERON:3010709") AnnotationAssertion(rdfs:label "levator mandibulae lateralis") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (m. interscapularis) AnnotationAssertion(Annotation( "AAO:MEJ") "Muscle which originates from the ventro-medial surface of the suprascapula and inserts on the ventral surface of the scapula.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010710") AnnotationAssertion(rdfs:label "m. interscapularis") SubClassOf( ) # Class: (levator mandibulae externus superficialis) AnnotationAssertion(Annotation( "AAO:BMZ") "Responsible for the closing of the jaw.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010711") AnnotationAssertion(rdfs:label "levator mandibulae externus superficialis") SubClassOf( ) # Class: (levator mandibulae externus profundus) AnnotationAssertion(Annotation( "AAO:BMZ") "Jaw muscle which is responsible for the closing of the jaw.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010712") AnnotationAssertion(rdfs:label "levator mandibulae externus profundus") SubClassOf( ) # Class: (m. sternoepicoracoideus) AnnotationAssertion(Annotation( "AAO:MEJ") "Muscle which originates on the anterior border of the distal part of the sternal horn and inserts antero-medially on the postero-dorsal surface of the epicoracoid cartilage.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010713") AnnotationAssertion(rdfs:label "m. sternoepicoracoideus") SubClassOf( ) # Class: (obsolete diverticulum) AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010717") AnnotationAssertion(rdfs:comment "obsoleted for an unknown reason") AnnotationAssertion(rdfs:label "obsolete diverticulum") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (dilated medial process of metacarpal IV) AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010719") AnnotationAssertion(rdfs:label "dilated medial process of metacarpal IV") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (ramus hyomandibularis) AnnotationAssertion(Annotation( "AAO:CAM") "The posttrematic branch of the facial nerve, both motor and sensory in function.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010720") AnnotationAssertion(rdfs:label "ramus hyomandibularis") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (limb villosities) AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010721") AnnotationAssertion(rdfs:label "limb villosities") SubClassOf( ) # Class: (ramus palatinus) AnnotationAssertion(Annotation( "AAO:CAM") "Sensory branch of facial nerve from palatal region.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010722") AnnotationAssertion(rdfs:label "ramus palatinus") SubClassOf( ) # Class: (levator quadrati) AnnotationAssertion(Annotation( "AAO:BMZ") "Responsible for the closing of the jaw, and innervated by the trigeminal nerve.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010724") AnnotationAssertion(rdfs:label "levator quadrati") SubClassOf( ) SubClassOf( ) # Class: (M. coracoradialis) AnnotationAssertion(Annotation( "AAO:MEJ") "Muscle which originates from the omosternum and epicoracoid cartilage and inserts on the proximal radioulna.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010725") AnnotationAssertion(rdfs:label "M. coracoradialis") SubClassOf( ) # Class: (ramus muscularis of glossopharyngeus nerve) AnnotationAssertion(Annotation( "AAO:EJS"^^xsd:string) "Branchiomotor branch of the glossopharyngeus nerve innervating the m. subarcuales rectus I.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010726") AnnotationAssertion(rdfs:label "ramus muscularis of glossopharyngeus nerve") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (otic opercular element) AnnotationAssertion(Annotation( "AAO:DBW") "Round, flat bone or cartilage that lies in the fenestra ovalis and articulates with the columella.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "otic operculum") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010728") AnnotationAssertion(rdfs:label "otic opercular element") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (M. coracobrachialis longus) AnnotationAssertion(Annotation( "AAO:MEJ") "Muscle which originates as a long belly from the dorsal coracoid near the sternum and inserts on the shaft of the humerus.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010729") AnnotationAssertion(rdfs:label "M. coracobrachialis longus") SubClassOf( ) # Class: (M. coracobrachialis brevis) AnnotationAssertion(Annotation( "AAO:MEJ") "Muscle which originates on the dorsal surface of the coracoid and scapula and inserts on the deltoid crest of the humerus.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010731") AnnotationAssertion(rdfs:label "M. coracobrachialis brevis") SubClassOf( ) # Class: (M. flexor carpi ulnaris) AnnotationAssertion(Annotation( "AAO:MEJ") "Muscle which originates from the medial condyle of the humerus and inserts on the carpus.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010734") AnnotationAssertion(rdfs:label "M. flexor carpi ulnaris") SubClassOf( ) # Class: (ramus anterior of CN VIII) AnnotationAssertion(Annotation( "AAO:EJS"^^xsd:string) "Formed by fibers from the anterior semicircular canal and sacculus.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010735") AnnotationAssertion(rdfs:label "ramus anterior of CN VIII") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (ramus posterior of CN VIII) AnnotationAssertion(Annotation( "AAO:EJS"^^xsd:string) "Composed of two rami: a short ventral ramus innervating the cochlea (lagena and papille basilar), and a long dorsal ramus innervating the posterior semicircular canal.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010736") AnnotationAssertion(rdfs:label "ramus posterior of CN VIII") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (M. palmaris longus) AnnotationAssertion(Annotation( "AAO:EJS"^^xsd:string) "Originates from the medial epicondyle of the humerus and inserts on the palmar aponeurosis.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010737") AnnotationAssertion(rdfs:label "M. palmaris longus") SubClassOf( ) # Class: (M. palmaris profundis) AnnotationAssertion(Annotation( "AAO:EJS"^^xsd:string) "Originates on the ulnar aspect of the radioulna and inserts on the palmar aponeurosis.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010738") AnnotationAssertion(rdfs:label "M. palmaris profundis") SubClassOf( ) # Class: (M. flexor antibrachii medialis) AnnotationAssertion(Annotation( "AAO:EJS"^^xsd:string) "Originates on the medial epicondyle of the humerus and inserts on the radial aspect of the radioulna.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010739") AnnotationAssertion(rdfs:label "M. flexor antibrachii medialis") SubClassOf( ) # Class: (ramus auricularis of the vagus nerve) AnnotationAssertion(Annotation( "AAO:EJS"^^xsd:string) "An afferent branch of the vagus nerve.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010740") AnnotationAssertion(rdfs:label "ramus auricularis of the vagus nerve") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (M. ulnocarpalis) AnnotationAssertion(Annotation( "AAO:EJS"^^xsd:string) "Originates along distal third of the ulna and inserts on the ulnare.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010741") AnnotationAssertion(rdfs:label "M. ulnocarpalis") SubClassOf( ) # Class: (interhyoideus posterior) AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010742") AnnotationAssertion(rdfs:label "interhyoideus posterior") SubClassOf( ) # Class: (M. flexor antibrachii lateralis superficialis) AnnotationAssertion(Annotation( "AAO:EJS"^^xsd:string) "Originates as a superior and inferior head. The superior head originates on the outer edge of the humerus and the inferior head originates on the lateral epicondyle of the humerus. Both bellies converge to form a tendon, which inserts on the carpus and the extensor tendon of digit I.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010743") AnnotationAssertion(rdfs:label "M. flexor antibrachii lateralis superficialis") SubClassOf( ) # Class: (M. flexor antibrachii lateralis profundus) AnnotationAssertion(Annotation( "AAO:EJS"^^xsd:string) "Originates on the lateral epicondyle of the humerus and inserts on the lower ridge of the radioulna.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010744") AnnotationAssertion(rdfs:label "M. flexor antibrachii lateralis profundus") SubClassOf( ) # Class: (M. coccygeosacralis) AnnotationAssertion(Annotation( "AAO:EJS"^^xsd:string) "Originates on the lateral surface of the urostyle and inserts on the neural arch of the sacrum or on the sacral diapophysis.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010745") AnnotationAssertion(rdfs:label "M. coccygeosacralis") SubClassOf( ) # Class: (T-shaped terminal phalanx) AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010746") AnnotationAssertion(rdfs:label "T-shaped terminal phalanx") SubClassOf( ) # Class: (submentalis) AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010747") AnnotationAssertion(rdfs:label "submentalis") SubClassOf( ) # Class: (M. coccygeoiliacus) AnnotationAssertion(Annotation( "AAO:EJS"^^xsd:string) "Originates on the lateral surface of the urostyle and passes ventral to the sacral diapophysis to insert on the anterior and medial surfaces of the ilial shaft.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010748") AnnotationAssertion(rdfs:label "M. coccygeoiliacus") SubClassOf( ) # Class: (M. iliolumbaris) AnnotationAssertion(Annotation( "AAO:EJS"^^xsd:string) "Originates on the anterior and lateral aspect of the ilial shaft and inserts on the transverse processes of presacral vertebrae IV-VII.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010749") AnnotationAssertion(rdfs:label "M. iliolumbaris") SubClassOf( ) # Class: (descending branch of the vagus nerve) AnnotationAssertion(Annotation( "AAO:EJS"^^xsd:string) "Major branch of the vagus supplying parasympathetic innervation to viscera.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010750") AnnotationAssertion(rdfs:label "descending branch of the vagus nerve") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (ramus muscularis of vagus nerve) AnnotationAssertion(Annotation( "AAO:CAM") "Motor nervous branch of the vagus innervating m. subarcualis rectus I.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010751") AnnotationAssertion(rdfs:label "ramus muscularis of vagus nerve") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete lobe) AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010752") AnnotationAssertion(rdfs:label "obsolete lobe") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (ramus recurrens) AnnotationAssertion(Annotation( "AAO:EJS"^^xsd:string) "Branch of the vagus nerve that separates from the vagus well postcranially, then continues anteriorly to innervate the larynx.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010754") AnnotationAssertion(rdfs:label "ramus recurrens") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (M. coccygeocutaneus) AnnotationAssertion(Annotation( "AAO:EJS"^^xsd:string) "Originates from the posterior tip of the urostyle and inserts on the cloacal musculature and the overlying skin.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010758") AnnotationAssertion(rdfs:label "M. coccygeocutaneus") SubClassOf( ) # Class: (laryngeus ventralis) AnnotationAssertion(Annotation( "AAO:CAM") "A branch of the vagus nerve innervating heart, stomach, and lung muscle.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010764") AnnotationAssertion(rdfs:label "laryngeus ventralis") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (dorsal sympathetic chain) AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010770") AnnotationAssertion(rdfs:label "dorsal sympathetic chain") SubClassOf( ) # Class: (ventral sympathetic chain) AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010771") AnnotationAssertion(rdfs:label "ventral sympathetic chain") SubClassOf( ) # Class: (M. dorsalis trunci) AnnotationAssertion(Annotation( "AAO:EJS"^^xsd:string) "Originates on the postero-dorsal edge of the postzygopophyses and insert on the dorsal surface of the neural arch of the posterior, adjacent vertebra.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010772") AnnotationAssertion(rdfs:label "M. dorsalis trunci") SubClassOf( ) # Class: (pars recta) AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010780") AnnotationAssertion(rdfs:label "pars recta") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pars convoluta of oviduct) AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "pars convoluta") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010781") AnnotationAssertion(rdfs:label "pars convoluta of oviduct") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (m. oblique externus) AnnotationAssertion(Annotation( "AAO:MEJ") "Originates on the posterior margin of the suprascapula and the epaxial fascia and inserts ventrally on the lateral fascia of the M. rectus abdominus and the ilial shaft.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010783") AnnotationAssertion(rdfs:label "m. oblique externus") SubClassOf( ) # Class: (m. oblique internus) AnnotationAssertion(Annotation( "AAO:BJB"^^xsd:string) "A muscular sheet in which the fibers run in right angles to those of the m. oblique externus, slanting downward anteriorly. This is one of three sheets composing the flank musculature.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010784") AnnotationAssertion(rdfs:label "m. oblique internus") SubClassOf( ) # Class: (m. transversus) AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010785") AnnotationAssertion(rdfs:label "m. transversus") SubClassOf( ) # Class: (pars subvertebralis) AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010786") AnnotationAssertion(rdfs:label "pars subvertebralis") SubClassOf( ) # Class: (pars transversalis) AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010787") AnnotationAssertion(rdfs:label "pars transversalis") SubClassOf( ) # Class: (muscle rectus abdominis superficialis) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "A component of the rectus abdominal muscle that is some taxa.") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010790") AnnotationAssertion(rdfs:label "muscle rectus abdominis superficialis") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (musculus rectus abdominis profundus) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "A component of the rectus abdominal muscle that is some taxa (see comment) forms a disctinct and separate muscle.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010792") AnnotationAssertion(rdfs:comment "In salamanders (Caudata) the m. rectus abdominis profundus is sometimes continuous with the m. rectus cervicis profundus. In extreme cases (family Plethodontidae) represents an undivided muscle that arises from the psoterior border of the ischium that proceds uninterrupted to the tongue pad.") AnnotationAssertion(rdfs:label "musculus rectus abdominis profundus") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (m. ypsiloideus anterior) AnnotationAssertion(Annotation( "AAO:BMZ") "Hypaxial muscle in which contraction elevates the ypsiloid cartilage; originates from the anterior edge of the lateral process of the ypsiloid cartilage and insert on the anteriorly adjacent inscription.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010793") AnnotationAssertion(rdfs:label "m. ypsiloideus anterior") SubClassOf( ) # Class: (m. ypsiloideus posterior) AnnotationAssertion(Annotation( "AAO:BMZ") "Contraction depresses the ypsiloid cartilage; arises from the anterodorsal edge of the pubis deep to the m. rectus abdominis profundus and spreads anteriorly in a fan shape to insert on the lateral edges of the shaft and the posterior edges of the lateral processes of the ypsiloid cartilage .") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010797") AnnotationAssertion(rdfs:label "m. ypsiloideus posterior") SubClassOf( ) # Class: (courtship gland) AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010802") AnnotationAssertion(rdfs:label "courtship gland") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete Dorsal tail tubercle) AnnotationAssertion( "UBERON:3010201") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010812") AnnotationAssertion(rdfs:label "obsolete Dorsal tail tubercle") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (vent glands) AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010813") AnnotationAssertion(rdfs:label "vent glands") SubClassOf( ) # Class: (m. flexor indicis superficialis proprius) AnnotationAssertion(Annotation( "AAO:MEJ") "Originates on the internal border of the distal carpal 5-4-3 and inserts on the distal end of phalynx I.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010815") AnnotationAssertion(rdfs:label "m. flexor indicis superficialis proprius") SubClassOf( ) # Class: (hepatic peritoneum) AnnotationAssertion(Annotation( "AAO:JMG") "Peritoneum that surrounds the liver.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010818") AnnotationAssertion(rdfs:label "hepatic peritoneum") SubClassOf( ) # Class: (gastrointestinal peritoneum) AnnotationAssertion(Annotation( "AAO:JMG") "Peritoneum that surrounds the stomach and intestines.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010819") AnnotationAssertion(rdfs:label "gastrointestinal peritoneum") SubClassOf( ) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (anterior prenasal cartilage) AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010827") AnnotationAssertion(rdfs:label "anterior prenasal cartilage") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (commissura terminales of hyoid apparatus) AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "commissura terminales") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010828") AnnotationAssertion(rdfs:label "commissura terminales of hyoid apparatus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (sulcus intermedius) AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010829") AnnotationAssertion(rdfs:label "sulcus intermedius") SubClassOf( ) # Class: (spicule) AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010830") AnnotationAssertion(rdfs:label "spicule") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (occipito-petrosal) AnnotationAssertion(Annotation( "AAO:EJS"^^xsd:string) "Fusion of the occipital segment or occipital ring and otic capsule (Francis, 1934).") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "occipital-petrosal") AnnotationAssertion( "uberon") AnnotationAssertion( "occipito-otic") AnnotationAssertion(Annotation( "Phenoscape:DB") "otic-occipital complex") AnnotationAssertion( "UBERON:3010831") AnnotationAssertion(rdfs:label "occipito-petrosal") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (occipital segment) AnnotationAssertion(Annotation( "AAO:EJS"^^xsd:string) "Metameric segment forming the back of the skull.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010832") AnnotationAssertion(rdfs:label "occipital segment") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (posterolateral supplementary element) AnnotationAssertion(Annotation( "AAO:EJS"^^xsd:string) "A muscle slip arising from the ventral surface of the mandible by means of the ligament near the site of mandibular articulation. The fibers pass anteromedially and attach upon the ventral surfaces of the principal element of the m. intermandibularis (Tyler, 1971).") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010836") AnnotationAssertion(rdfs:label "posterolateral supplementary element") SubClassOf( ) # Class: (apical supplementary element) AnnotationAssertion(Annotation( "AAO:EJS"^^xsd:string) "A muscle slip arising from the lingual surface of the mandible on each side of the m. submentalis. The fibers pass posteromedially and attach upon the median raphe of the principal element (Tyler, 1971).") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010837") AnnotationAssertion(rdfs:label "apical supplementary element") SubClassOf( ) # Class: (anterolateral supplementary element) AnnotationAssertion(Annotation( "AAO:EJS"^^xsd:string) "A muscle slip arising from the lingual surface of the mandible on the anterior portion of the bone. The fibers pass anteriorly, parallel to the mandible, and attach upon the ventral surface of the m. submentalis (Tyler, 1971).") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010838") AnnotationAssertion(rdfs:label "anterolateral supplementary element") SubClassOf( ) # Class: (obsolete portion of cell substance) AnnotationAssertion(Annotation( "AAO:BJB"^^xsd:string) "Portion of organism substance located within a cell.") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion(Annotation(rdfs:label "portion of cell substance") "CARO:0000063") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3010840") AnnotationAssertion(rdfs:label "obsolete portion of cell substance") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (first pancreatic bud) AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion(Annotation( "UBERON:3011040") "pancreas") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3011040") AnnotationAssertion(rdfs:label "first pancreatic bud") SubClassOf( ) # Class: (gasserian ganglion) AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "UBERON:3011045") "gasserian ganglia") AnnotationAssertion( "UBERON:3011045") AnnotationAssertion(rdfs:label "gasserian ganglion") SubClassOf( ) # Class: (genital system) AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3011048") AnnotationAssertion(rdfs:label "genital system") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete posterior cardinal vein) AnnotationAssertion( "UBERON:0002065") AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3011081") AnnotationAssertion(rdfs:label "obsolete posterior cardinal vein") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete tympanum) AnnotationAssertion( "UBERON:0002364") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion(Annotation( "UBERON:3011108") "tympanic membrane") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3011108") AnnotationAssertion(rdfs:label "obsolete tympanum") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (early proximal tubule) AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "2011-04-20T05:19:55Z") AnnotationAssertion(Annotation( "UBERON:3011120") "PT2") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3011120") AnnotationAssertion(rdfs:label "early proximal tubule") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (late distal segment) AnnotationAssertion( "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "2011-04-20T05:21:45Z") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3011121") AnnotationAssertion(rdfs:label "late distal segment") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete late proximal tubule) AnnotationAssertion( "UBERON:0009622") AnnotationAssertion( "amphibian_anatomy_curators") AnnotationAssertion( "2011-04-20T05:22:49Z") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:3011122") AnnotationAssertion(rdfs:label "obsolete late proximal tubule") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete mode of ossification) AnnotationAssertion(Annotation( ) Annotation( "GOC:mtg_mpo") "The formation of bone or of a bony substance, or the conversion of fibrous tissue or of cartilage into bone or a bony substance.") AnnotationAssertion( "GO:0001503") AnnotationAssertion( "This class was sourced from an external ontology (vertebrate_skeletal_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "vertebrate_skeletal_anatomy_curators") AnnotationAssertion( "GO:0001503") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4000002") AnnotationAssertion(rdfs:label "obsolete mode of ossification") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (permanent cartilage) AnnotationAssertion(Annotation( "PSPUB:0000170"^^xsd:string) "Chondrogenic element that is composed of cartilage that is not replaced.") AnnotationAssertion( "This class was sourced from an external ontology (vertebrate_skeletal_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "vertebrate_skeletal_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4000003") AnnotationAssertion(rdfs:label "permanent cartilage") SubClassOf( ) # Class: (obsolete opercle bone) AnnotationAssertion(Annotation( "TAO:curator") "Dermal bone that forms the postero-dorsal part of the opercular series. The opercle articulates with the hyomandibula antero-dorsally and with the subopercle ventrally. The opercle is a paired bone.") AnnotationAssertion( "UBERON:2000250") AnnotationAssertion( "This class was sourced from an external ontology (vertebrate_skeletal_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "vertebrate_skeletal_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4000004") AnnotationAssertion(rdfs:comment "Term resides in TAO.") AnnotationAssertion(rdfs:label "obsolete opercle bone") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete basihyal element) AnnotationAssertion( "UBERON:0011614") AnnotationAssertion( "This class was sourced from an external ontology (vertebrate_skeletal_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "vertebrate_skeletal_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4000005") AnnotationAssertion(rdfs:comment "Term resides in TAO.") AnnotationAssertion(rdfs:label "obsolete basihyal element") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete basihyal bone) AnnotationAssertion(Annotation( "TAO:curator") "Endochondral bone that is median and is the anterior-most bone of the ventral hyoid arch.") AnnotationAssertion( "UBERON:0011618") AnnotationAssertion( "This class was sourced from an external ontology (vertebrate_skeletal_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "vertebrate_skeletal_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4000007") AnnotationAssertion(rdfs:comment "Term resides in TAO.") AnnotationAssertion(rdfs:label "obsolete basihyal bone") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete notochordal cell) AnnotationAssertion(Annotation( "VSAO:curator"^^xsd:string) "Cell of the notochord, often vacuolated or resembles a chondrocyte.") AnnotationAssertion( "CL:0007005") AnnotationAssertion( "This class was sourced from an external ontology (vertebrate_skeletal_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "vertebrate_skeletal_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4000009") AnnotationAssertion(rdfs:label "obsolete notochordal cell") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete notochordal mesodermal cell) AnnotationAssertion( "CL:0007006") AnnotationAssertion( "This class was sourced from an external ontology (vertebrate_skeletal_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "vertebrate_skeletal_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4000010") AnnotationAssertion(rdfs:label "obsolete notochordal mesodermal cell") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete skeletogenic cell) AnnotationAssertion(Annotation( "VSAO:curator"^^xsd:string) "Cell that has the potential to form a skeletal cell type (e.g., cells in periosteum, cells in marrow) and produce extracellular matrix (often mineralized) and skeletal tissue (often mineralized).") AnnotationAssertion( "CL:0007001") AnnotationAssertion( "This class was sourced from an external ontology (vertebrate_skeletal_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "vertebrate_skeletal_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4000012") AnnotationAssertion(rdfs:label "obsolete skeletogenic cell") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (mineralized skeletal tissue) AnnotationAssertion(Annotation( "XAO:0004039") Annotation( "XAO:EJS") "Skeletal tissue that is mineralized.") AnnotationAssertion(Annotation( "VSAO:0000013") "mineralized tissue") AnnotationAssertion( "VSAO:0000013") AnnotationAssertion( "XAO:0004039") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4000013") AnnotationAssertion(rdfs:label "mineralized skeletal tissue") SubClassOf( ) # Class: (obsolete basihyal cartilage) AnnotationAssertion(Annotation( "TAO:curator") "Pharyngeal arch cartilage that is median and is the anterior-most cartilage of the ventral hyoid arch.") AnnotationAssertion( "UBERON:0011615") AnnotationAssertion( "This class was sourced from an external ontology (vertebrate_skeletal_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "vertebrate_skeletal_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4000014") AnnotationAssertion(rdfs:comment "Term resides in TAO.") AnnotationAssertion(rdfs:label "obsolete basihyal cartilage") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete basihyal condensation) AnnotationAssertion( "This class was sourced from an external ontology (vertebrate_skeletal_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "vertebrate_skeletal_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4000016") AnnotationAssertion(rdfs:label "obsolete basihyal condensation") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete ventral hyoid arch) AnnotationAssertion( "UBERON:0011153") AnnotationAssertion( "This class was sourced from an external ontology (vertebrate_skeletal_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "vertebrate_skeletal_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4000018") AnnotationAssertion(rdfs:comment "Term resides in TAO.") AnnotationAssertion(rdfs:label "obsolete ventral hyoid arch") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete chordablast) AnnotationAssertion(Annotation( "VSAO:curator"^^xsd:string) "Epithelial cell that is large, vacuolated, and part of the notochord.") AnnotationAssertion( "CL:0007008") AnnotationAssertion( "This class was sourced from an external ontology (vertebrate_skeletal_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "vertebrate_skeletal_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4000019") AnnotationAssertion(rdfs:label "obsolete chordablast") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (mineralized extracellular matrix) AnnotationAssertion(Annotation( "PSPUB:0000170"^^xsd:string) "Extracellular matrix that is mineralized.") AnnotationAssertion( "This class was sourced from an external ontology (vertebrate_skeletal_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "vertebrate_skeletal_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4000020") AnnotationAssertion(rdfs:label "mineralized extracellular matrix") SubClassOf( ) # Class: (obsolete proteinaceous extracellular matrix) AnnotationAssertion(Annotation( "GOC:mtg_sensu") Annotation( "GO_REF:0000034"^^xsd:string) Annotation( "ISBN:0198547684") Annotation( "VSAO:curator"^^xsd:string) "A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity. An example of this component is found in Mus musculus. [GOC:mtg_sensu, ISBN:0198547684].") AnnotationAssertion( "GO:0005578") AnnotationAssertion( "This class was sourced from an external ontology (vertebrate_skeletal_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "vertebrate_skeletal_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4000021") AnnotationAssertion(rdfs:label "obsolete proteinaceous extracellular matrix") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete extracellular matrix) AnnotationAssertion(Annotation( "PSPUB:0000170"^^xsd:string) "Combination of protein fibers, ground substance and tissue fluid; typically has embedded cells.") AnnotationAssertion( "GO:0031012") AnnotationAssertion( "This class was sourced from an external ontology (vertebrate_skeletal_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "vertebrate_skeletal_anatomy_curators") AnnotationAssertion(Annotation( "VSAO:curator"^^xsd:string) "ECM") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4000022") AnnotationAssertion(rdfs:label "obsolete extracellular matrix") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete intercalar) AnnotationAssertion(Annotation( "TAO:curator") "Small membrane bone homologous with a cartilage bone in more basal fishes (Patterson, 1977). Situated between the exoccipital and the pterotic at point of attachment of short ligament that originates on the ventral arm of the posttemporal.") AnnotationAssertion( "UBERON:2000474") AnnotationAssertion( "This class was sourced from an external ontology (vertebrate_skeletal_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "vertebrate_skeletal_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4000024") AnnotationAssertion(rdfs:comment "Term resides in TAO.") AnnotationAssertion(rdfs:label "obsolete intercalar") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (integumentary papilla) AnnotationAssertion(Annotation( "PSPUB:0000170"^^xsd:string) "Odontogenic papilla that is located in the integument.") AnnotationAssertion( "This class was sourced from an external ontology (vertebrate_skeletal_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "vertebrate_skeletal_anatomy_curators") AnnotationAssertion(Annotation( "VSAO:curator"^^xsd:string) "scale papilla") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4000028") AnnotationAssertion(rdfs:label "integumentary papilla") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (oropharyngeal papilla) AnnotationAssertion(Annotation( "PSPUB:0000170"^^xsd:string) "Odontogenic papilla located along the jaws or pharyngeal skeleton.") AnnotationAssertion( "This class was sourced from an external ontology (vertebrate_skeletal_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "vertebrate_skeletal_anatomy_curators") AnnotationAssertion(Annotation( "VSAO:curator"^^xsd:string) "oropharyngeal dental papilla") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4000030") AnnotationAssertion(rdfs:label "oropharyngeal papilla") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete preameloblast) AnnotationAssertion(Annotation( "VSAO:curator"^^xsd:string) "Skeletogenic cell that has the potential to develop into an ameloblast.") AnnotationAssertion( "CL:0007000") AnnotationAssertion( "This class was sourced from an external ontology (vertebrate_skeletal_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "vertebrate_skeletal_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4000038") AnnotationAssertion(rdfs:label "obsolete preameloblast") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete chordoblast) AnnotationAssertion(Annotation( "VSAO:curator"^^xsd:string) "Skeletogenic cell that is derived from the notochordal mesoderm and produces notochordal tissue (and cartilage tissue in some taxa).") AnnotationAssertion( "CL:0007008") AnnotationAssertion( "This class was sourced from an external ontology (vertebrate_skeletal_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "vertebrate_skeletal_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4000039") AnnotationAssertion(rdfs:label "obsolete chordoblast") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete preodontoblast) AnnotationAssertion(Annotation( "VSAO:curator"^^xsd:string) "Skeletogenic cell that has the potential to form an odontoblast, deposits predentine, and arises from a neural crest cell.") AnnotationAssertion( "CL:0007003") AnnotationAssertion( "This class was sourced from an external ontology (vertebrate_skeletal_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "vertebrate_skeletal_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4000041") AnnotationAssertion(rdfs:label "obsolete preodontoblast") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete precementoblast) AnnotationAssertion(Annotation( "VSAO:curator"^^xsd:string) "Skeletogenic cell that has the potential to develop into a cementoblast.") AnnotationAssertion( "CL:0007002") AnnotationAssertion( "This class was sourced from an external ontology (vertebrate_skeletal_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "vertebrate_skeletal_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4000043") AnnotationAssertion(rdfs:label "obsolete precementoblast") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete prechondroblast) AnnotationAssertion(Annotation( "VSAO:curator"^^xsd:string) "Skeletogenic cell that has the potential to develop into a chondroblast; and arises from neural crest, meseosdermal and notochordal and connective tissue cells.") AnnotationAssertion( "CL:0007009") AnnotationAssertion( "This class was sourced from an external ontology (vertebrate_skeletal_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "vertebrate_skeletal_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4000044") AnnotationAssertion(rdfs:label "obsolete prechondroblast") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete preosteoblast) AnnotationAssertion(Annotation( "VSAO:curator"^^xsd:string) "Skeletogenic cell that has the potential to transform into an osteoblast, and develops from neural crest or mesodermal cells.") AnnotationAssertion( "CL:0007010") AnnotationAssertion( "This class was sourced from an external ontology (vertebrate_skeletal_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "vertebrate_skeletal_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4000045") AnnotationAssertion(rdfs:label "obsolete preosteoblast") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (vacuolated notochordal tissue) AnnotationAssertion(Annotation( "PSPUB:0000170"^^xsd:string) "Connective tissue that is matrix-poor with large number of vacuolated cells.") AnnotationAssertion( "This class was sourced from an external ontology (vertebrate_skeletal_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "vertebrate_skeletal_anatomy_curators") AnnotationAssertion(Annotation( "VSAO:curator"^^xsd:string) "notochord proper") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4000053") AnnotationAssertion(rdfs:label "vacuolated notochordal tissue") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (avascular GAG-rich matrix) AnnotationAssertion(Annotation( "PSPUB:0000170"^^xsd:string) "Proteinaceous extracellular matrix that is avascular and consists primarily of glycosaminoglycans.") AnnotationAssertion( "This class was sourced from an external ontology (vertebrate_skeletal_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "vertebrate_skeletal_anatomy_curators") AnnotationAssertion(Annotation( "VSAO:curator"^^xsd:string) "avascular glycosaminoglycan-rich matrix") AnnotationAssertion(Annotation( "VSAO:curator"^^xsd:string) "cartilage matrix") AnnotationAssertion(Annotation( "VSAO:curator"^^xsd:string) "cartilage-like matrix") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4000059") AnnotationAssertion(rdfs:label "avascular GAG-rich matrix") SubClassOf( ) # Class: (non-mineralized chondroid tissue) AnnotationAssertion( "This class was sourced from an external ontology (vertebrate_skeletal_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "vertebrate_skeletal_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4000077") AnnotationAssertion(rdfs:label "non-mineralized chondroid tissue") SubClassOf( ) # Class: (chondroid tissue) AnnotationAssertion(Annotation( "PSPUB:0000170"^^xsd:string) Annotation( "TAO:curator") "Skeletal tissue that is mineralized, has large chondrocyte-like cells, sparse extracellular matrix, and minimal perichondrium; develops from non-mineralized chondroid tissue.") AnnotationAssertion( "This class was sourced from an external ontology (vertebrate_skeletal_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "vertebrate_skeletal_anatomy_curators") AnnotationAssertion(Annotation( "VSAO:curator"^^xsd:string) "chondroid bone tissue") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4000078") AnnotationAssertion(rdfs:label "chondroid tissue") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (secondary cartilage tissue) AnnotationAssertion(Annotation( "PSPUB:0000170"^^xsd:string) "Cartilage tissue that is part of the exoskeleton, deposited adjacent to bone after bone formation.") AnnotationAssertion( "This class was sourced from an external ontology (vertebrate_skeletal_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "vertebrate_skeletal_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4000086") AnnotationAssertion(rdfs:label "secondary cartilage tissue") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (cosmine) AnnotationAssertion( "This class was sourced from an external ontology (vertebrate_skeletal_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "vertebrate_skeletal_anatomy_curators") AnnotationAssertion(Annotation( "PSPUB:0000170"^^xsd:string) "cosmoid scale tissue") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4000087") AnnotationAssertion(rdfs:label "cosmine") SubClassOf( ) # Class: (mineralized cartilage tissue) AnnotationAssertion(Annotation( "PSPUB:0000170"^^xsd:string) "Cartilage tissue that is mineralized.") AnnotationAssertion( "This class was sourced from an external ontology (vertebrate_skeletal_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "vertebrate_skeletal_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4000088") AnnotationAssertion(rdfs:label "mineralized cartilage tissue") SubClassOf( ) # Class: (integumentary skeleton) AnnotationAssertion(Annotation( "PSPUB:0000170"^^xsd:string) "Skeletal subdivision that is part of the extra-oral dermal skeletal system that develops and remains invested within the integument, primarily the dermis.") AnnotationAssertion( "This class was sourced from an external ontology (vertebrate_skeletal_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "vertebrate_skeletal_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4000090") AnnotationAssertion(rdfs:label "integumentary skeleton") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete non-terminally differentiated odontoblast) AnnotationAssertion(Annotation( "PSPUB:0000170"^^xsd:string) "Odontoblast that non-terminally differentiated, located in the odontogenic papilla and dentine tissue, and transforms from a odontoblast cell.") AnnotationAssertion( "CL:00007012") AnnotationAssertion( "This class was sourced from an external ontology (vertebrate_skeletal_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "vertebrate_skeletal_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4000095") AnnotationAssertion(rdfs:label "obsolete non-terminally differentiated odontoblast") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete terminally differentiated odontoblast) AnnotationAssertion(Annotation( "VSAO:curator"^^xsd:string) "Odontoblast that is terminally differentiated and derived from an odontogenic papilla and associated with dentine.") AnnotationAssertion( "CL:00007013") AnnotationAssertion( "This class was sourced from an external ontology (vertebrate_skeletal_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "vertebrate_skeletal_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4000096") AnnotationAssertion(rdfs:label "obsolete terminally differentiated odontoblast") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (orthodentine) AnnotationAssertion(Annotation( "PSPUB:0000170"^^xsd:string) "Odontoid tissue that typically contains tubules and is acellular.") AnnotationAssertion( "This class was sourced from an external ontology (vertebrate_skeletal_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "vertebrate_skeletal_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4000097") AnnotationAssertion(rdfs:label "orthodentine") SubClassOf( ) # Class: (osteodentine) AnnotationAssertion( "This class was sourced from an external ontology (vertebrate_skeletal_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "vertebrate_skeletal_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4000102") AnnotationAssertion(rdfs:label "osteodentine") SubClassOf( ) # Class: (vasodentine) AnnotationAssertion(Annotation( "PSPUB:0000170"^^xsd:string) "Dentine tissue that lacks dentine tubules and that is penetrated by blood capillaries.") AnnotationAssertion( "This class was sourced from an external ontology (vertebrate_skeletal_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "vertebrate_skeletal_anatomy_curators") AnnotationAssertion(Annotation( "VSAO:curator"^^xsd:string) "vascular dentine") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4000106") AnnotationAssertion(rdfs:label "vasodentine") SubClassOf( ) # Class: (non-mineralized hyaline cartilage tissue) AnnotationAssertion(Annotation( "PSPUB:0000170"^^xsd:string) "Hyaline cartilage tissue that is not mineralized.") AnnotationAssertion( "This class was sourced from an external ontology (vertebrate_skeletal_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "vertebrate_skeletal_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4000108") AnnotationAssertion(rdfs:label "non-mineralized hyaline cartilage tissue") SubClassOf( ) SubClassOf( ) # Class: (mineralized hyaline cartilage tissue) AnnotationAssertion(Annotation( "PSPUB:0000170"^^xsd:string) "Hyaline cartilage tissue that is mineralized.") AnnotationAssertion( "This class was sourced from an external ontology (vertebrate_skeletal_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "vertebrate_skeletal_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4000109") AnnotationAssertion(rdfs:label "mineralized hyaline cartilage tissue") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (mineralized bone tissue) AnnotationAssertion(Annotation( "PSPUB:0000170"^^xsd:string) "Bone tissue mineralized with hydroxyapatite.") AnnotationAssertion( "vertebrate_skeletal_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4000115") AnnotationAssertion(rdfs:label "mineralized bone tissue") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete terminally differentiated osteoblast) AnnotationAssertion(Annotation( "VSAO:curator"^^xsd:string) "Osteoblast that is terminally differentiated, located adjacent to acellular or cellular bone tissue within periosteum, and is capable of mineralizing the matrix.") AnnotationAssertion( "CL:0001039") AnnotationAssertion( "This class was sourced from an external ontology (vertebrate_skeletal_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "vertebrate_skeletal_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4000116") AnnotationAssertion(rdfs:label "obsolete terminally differentiated osteoblast") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete non-terminally differentiated osteoblast) AnnotationAssertion(Annotation( "VSAO:curator"^^xsd:string) "Osteoblast that is non-terminally differentiated and located in cellular bone tissue or under the periosteum in acellular bone.") AnnotationAssertion( "CL:0001040") AnnotationAssertion( "This class was sourced from an external ontology (vertebrate_skeletal_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "vertebrate_skeletal_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4000117") AnnotationAssertion(rdfs:label "obsolete non-terminally differentiated osteoblast") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (cellular bone tissue) AnnotationAssertion(Annotation( "PSPUB:0000170"^^xsd:string) "Mineralized bone tissue that always includes non-terminally differentiated osteoblasts and osteocytes.") AnnotationAssertion( "vertebrate_skeletal_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4000118") AnnotationAssertion(rdfs:label "cellular bone tissue") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses( ) # Class: (non-mineralized avascular GAG-rich matrix) AnnotationAssertion(Annotation( "PSPUB:0000170"^^xsd:string) "Avascular GAG-rich matrix that is not mineralized.") AnnotationAssertion( "This class was sourced from an external ontology (vertebrate_skeletal_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "vertebrate_skeletal_anatomy_curators") AnnotationAssertion(Annotation( "VSAO:curator"^^xsd:string) "non-mineralized cartilage") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4000119") AnnotationAssertion(rdfs:label "non-mineralized avascular GAG-rich matrix") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (mineralized avascular GAG-rich matrix) AnnotationAssertion(Annotation( "PSPUB:0000170"^^xsd:string) "Avascular GAG-rich matrix that is mineralized.") AnnotationAssertion( "This class was sourced from an external ontology (vertebrate_skeletal_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "vertebrate_skeletal_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4000120") AnnotationAssertion(rdfs:label "mineralized avascular GAG-rich matrix") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (acellular bone tissue) AnnotationAssertion(Annotation( "PSPUB:0000170"^^xsd:string) "Mineralized bone tissue that has terminally differentiated osteoblasts but lacks osteocytes.") AnnotationAssertion( "vertebrate_skeletal_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4000122") AnnotationAssertion(rdfs:label "acellular bone tissue") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (odontode tissue) AnnotationAssertion(Annotation( "PSPUB:0000170"^^xsd:string) "Skeletal tissue that is avascular tubular mineralized matrix, primarily made of dentine that is deposited by odontoblasts that are excluded from the matrix; develops from pre-dentine tissue.") AnnotationAssertion( "This class was sourced from an external ontology (vertebrate_skeletal_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "vertebrate_skeletal_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "VSAO:curator"^^xsd:string) "dental tissue") AnnotationAssertion( "UBERON:4000123") AnnotationAssertion(rdfs:label "odontode tissue") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (ossified tendon) AnnotationAssertion(Annotation( "PSPUB:0000169") "Sesamoid that develops within a tendon, distal to an articulation or joint.") AnnotationAssertion( "This class was sourced from an external ontology (vertebrate_skeletal_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "vertebrate_skeletal_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "VSAO:0000134") "intratendonous ossification") AnnotationAssertion( "UBERON:4000134") AnnotationAssertion(rdfs:label "ossified tendon") SubClassOf( ) # Class: (obsolete direct ossification) AnnotationAssertion(Annotation( "PSPUB:0000170"^^xsd:string) "Ossification that does not require the replacement of pre-existing tissues, most often a cartilaginous model.") AnnotationAssertion( "GO:0036072") AnnotationAssertion( "This class was sourced from an external ontology (vertebrate_skeletal_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "vertebrate_skeletal_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4000136") AnnotationAssertion(rdfs:label "obsolete direct ossification") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (ligamentous replacement element) AnnotationAssertion(Annotation( "PSPUB:0000170"^^xsd:string) "Replacement element that forms as a replacement of a ligament.") AnnotationAssertion( "This class was sourced from an external ontology (vertebrate_skeletal_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "vertebrate_skeletal_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4000138") AnnotationAssertion(rdfs:label "ligamentous replacement element") SubClassOf( ) # Class: (obsolete replacement ossification) AnnotationAssertion(Annotation( "VSAO:curator"^^xsd:string) "Ossification that requires the replacement of a pre-existing tissue prior to bone tissue formation.") AnnotationAssertion( "GO:0036075") AnnotationAssertion( "This class was sourced from an external ontology (vertebrate_skeletal_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "vertebrate_skeletal_anatomy_curators") AnnotationAssertion(Annotation( "VSAO:0000140") "indirect ossification") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4000140") AnnotationAssertion(rdfs:label "obsolete replacement ossification") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete intramembranous ossification) AnnotationAssertion(Annotation( "VSAO:curator"^^xsd:string) "Direct ossification that occurs within mesenchyme with the formation of an osteogenic condensation not associated with a perichondrium.") AnnotationAssertion( "GO:0001957") AnnotationAssertion( "This class was sourced from an external ontology (vertebrate_skeletal_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "vertebrate_skeletal_anatomy_curators") AnnotationAssertion( "GO:0001957") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4000141") AnnotationAssertion(rdfs:label "obsolete intramembranous ossification") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete metaplastic ossification) AnnotationAssertion(Annotation( "VSAO:curator"^^xsd:string) "Direct ossification in which transformation of the pre-existing tissue occurs without dedifferentiation of cells or reinitiation of cell division; direct transformation of a non-bone tissue into a bone tissue.") AnnotationAssertion( "GO:0036074") AnnotationAssertion( "This class was sourced from an external ontology (vertebrate_skeletal_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "vertebrate_skeletal_anatomy_curators") AnnotationAssertion(Annotation( "VSAO:0000142") "metaplasia") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4000142") AnnotationAssertion(rdfs:label "obsolete metaplastic ossification") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete endochondral ossification) AnnotationAssertion(Annotation( "VSAO:curator"^^xsd:string) "Replacement ossification wherein bone tissue replaces cartilage.") AnnotationAssertion( "GO:0001958") AnnotationAssertion( "This class was sourced from an external ontology (vertebrate_skeletal_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "vertebrate_skeletal_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4000143") AnnotationAssertion(rdfs:label "obsolete endochondral ossification") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete perichondral ossification) AnnotationAssertion(Annotation( "VSAO:curator"^^xsd:string) "Intramembranous ossification on the surface of a cartilage element as the perichondrium becomes a periosteum, without replacement of cartilage.") AnnotationAssertion( "GO:0036073") AnnotationAssertion( "This class was sourced from an external ontology (vertebrate_skeletal_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "vertebrate_skeletal_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4000144") AnnotationAssertion(rdfs:label "obsolete perichondral ossification") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (transient cartilaginous element) AnnotationAssertion(Annotation( "PSPUB:0000170"^^xsd:string) "Chondrogenic element that is composed of cartilage during development and has the potential to become replaced by another tissue.") AnnotationAssertion( "This class was sourced from an external ontology (vertebrate_skeletal_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "vertebrate_skeletal_anatomy_curators") AnnotationAssertion(Annotation( "VSAO:0000146") "endochondral replacement cartilage") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4000146") AnnotationAssertion(rdfs:label "transient cartilaginous element") SubClassOf( ) SubClassOf( ) # Class: (ossified ligament) AnnotationAssertion(Annotation( "GO_REF:0000034"^^xsd:string) Annotation( "PSPUB:0000169") "Sesamoid that develops within a ligament, distal to an articulation or joint.") AnnotationAssertion( "This class was sourced from an external ontology (vertebrate_skeletal_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "vertebrate_skeletal_anatomy_curators") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4000159") AnnotationAssertion(rdfs:label "ossified ligament") SubClassOf( ) # Class: (anocleithrum) AnnotationAssertion(Annotation( "VSAO:curator"^^xsd:string) "Dermal bone of pectoral girdle that is dorsal to and articulates with the cleithrum.") AnnotationAssertion( "This class was sourced from an external ontology (vertebrate_skeletal_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "vertebrate_skeletal_anatomy_curators") AnnotationAssertion(Annotation( "VSAO:0000160") Annotation( ) "anocleithra") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4000160") AnnotationAssertion(rdfs:comment "In sarcopterygians; analogous in position to postcleithrum in actinopterygians.") AnnotationAssertion(rdfs:label "anocleithrum") SubClassOf( ) SubClassOf( ) # Class: (scapular complex) AnnotationAssertion(Annotation( "VSAO:curator"^^xsd:string) "Skeletal subdivision of dermal bones that may include the anterolateral plate (AL), the spinal process (Sp), and anteroventral plate (AV) and other dermal bones that are part of the pectoral girdle.") AnnotationAssertion( "This class was sourced from an external ontology (vertebrate_skeletal_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon") AnnotationAssertion( "vertebrate_skeletal_anatomy_curators") AnnotationAssertion(Annotation( "ISBN:3-89937-052-X") "pectoral complex") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4000171") AnnotationAssertion(rdfs:comment "A scapular complex is described in placoderms (Goujet and Young, 1995).") AnnotationAssertion(rdfs:label "scapular complex") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (skeletal element projection) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "Anatomical projection that is composed of bone or cartilage tissue.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4100000") AnnotationAssertion(rdfs:label "skeletal element projection") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete astragalus-calcaneum unit) AnnotationAssertion(Annotation( "PHENOSCAPE:ni") "Anatomical cluster that is an osteological unit consisting of the astragalus and calcaneum.") AnnotationAssertion( "Nizar Ibrahim") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4100001") AnnotationAssertion(rdfs:comment "TO DO: add astragalus after it has been added.") AnnotationAssertion(rdfs:label "obsolete astragalus-calcaneum unit") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete ectepicondylar flange) AnnotationAssertion(Annotation( "PHENOSCAPE:ni") "Flange on the dorsal part of the humerus, associated with extensor musculature of the forelimb (manus. carpus).") AnnotationAssertion( "Nizar Ibrahim") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4100002") AnnotationAssertion(rdfs:label "obsolete ectepicondylar flange") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (articular surface) AnnotationAssertion(Annotation( "PHENOSCAPE:NI") "Anatomical surface that is part of a skeletal element and articulates with another skeletal element.") AnnotationAssertion( "Nizar Ibrahim") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4100003") AnnotationAssertion(rdfs:comment "Not necessarily part of a joint.") AnnotationAssertion(rdfs:label "articular surface") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (ischial peduncle) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "Bony projection (peduncle) that is located on the posterior portion of the ilium, posterior to the acetabulum.") AnnotationAssertion( "Nizar Ibrahim") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4100004") AnnotationAssertion(rdfs:label "ischial peduncle") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (second phalanx) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "Second most proximal phalanx in manual or pedal digits.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4100005") AnnotationAssertion(rdfs:comment "Consider merging with 'intermediate phalanx'") AnnotationAssertion(rdfs:label "second phalanx") SubClassOf( ) # Class: (pectoral articular facet) AnnotationAssertion(Annotation( "PHENOSCAPE:pm") "Facet of scapulocoracoid with which the pectoral fin radial(s) articulates. Facet of scapulocoracoid with which the pectoral fin radial(s) articulates. Based on Goujet and Young (1995).") AnnotationAssertion( "NI") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4100007") AnnotationAssertion(rdfs:comment "Should be part of some joint.") AnnotationAssertion(rdfs:label "pectoral articular facet") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete pedal claws) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "OBSOLETE Claws on the pes.") AnnotationAssertion( "UBERON:0009567") AnnotationAssertion( "NI") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4100008") AnnotationAssertion(rdfs:comment "Term is redundant with 'nail of pedal digit' (UBERON:0009567).") AnnotationAssertion(rdfs:label "obsolete pedal claws") AnnotationAssertion(rdfs:seeAlso "https://github.com/obophenotype/uberon/issues/1699") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (pedal digit 7 phalanx) AnnotationAssertion(Annotation( "PHENOSCAPE:AD") "Phalanx of the 7th pedal digit.") AnnotationAssertion( "NI") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4100009") AnnotationAssertion(rdfs:label "pedal digit 7 phalanx") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (post-glenoid process) AnnotationAssertion(Annotation( "PHENOSCAPE:NI") "Distinct notch ventral to the glenoid.") AnnotationAssertion( "NI") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4100010") AnnotationAssertion(rdfs:comment "Fix def'n") AnnotationAssertion(rdfs:label "post-glenoid process") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (postacetabular buttress) AnnotationAssertion(Annotation( "PHENOSCAPE:AD") "A bony process at the distal margin of the acetabulum formed by the ischium and/or the ischial peduncle of the ilium.") AnnotationAssertion( "NI") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4100011") AnnotationAssertion(rdfs:label "postacetabular buttress") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (postacetabular zone) AnnotationAssertion(Annotation( "PHENOSCAPE:AD") "Region of the ilium posterior and dorsal to the acetabulum.") AnnotationAssertion( "NI") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4100012") AnnotationAssertion(rdfs:label "postacetabular zone") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (postcoracoid) AnnotationAssertion(Annotation( "PHENOSCAPE:AD") "The posterior of the two coracoid elements found in basal tetrapods. Corresponds directly to the 'coracoid' of synapsids.") AnnotationAssertion( "NI") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4100013") AnnotationAssertion(rdfs:label "postcoracoid") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete posterior iliac process) AnnotationAssertion(Annotation( "PHENOSCAPE:AD") "Posterior most of the two 'double heads' of the blade of the ilium in some take. Distinct and separate for the dorsal iliac process.") AnnotationAssertion( "NI") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4100015") AnnotationAssertion(rdfs:label "obsolete posterior iliac process") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (posterior process of ilium) AnnotationAssertion(Annotation( "PHENOSCAPE:AD") "A posteriorly directed bony projection from the ilium that is the attachment site of the iliofibularis muscle (see Sumida, 1997).") AnnotationAssertion( "NI") AnnotationAssertion( "uberon") AnnotationAssertion( "posterior iliac process") AnnotationAssertion( "UBERON:4100016") AnnotationAssertion(rdfs:label "posterior process of ilium") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (parasphenoid flange) AnnotationAssertion(Annotation( "PHENOSCAPE:BC") "Lateral expansion of the parasphenoid.") AnnotationAssertion( "NI") AnnotationAssertion( "parasphenoid wing") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4100100") AnnotationAssertion(rdfs:label "parasphenoid flange") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (radial facet) AnnotationAssertion(Annotation( "PHENOSCAPE:NI") "Facet to accommodate the radius on the distal end of the humerus.") AnnotationAssertion( "NI") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4100112") AnnotationAssertion(rdfs:label "radial facet") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (dermal intracranial joint) AnnotationAssertion(Annotation( "PHENOSCAPE:NI") "Hinge in the skull skeleton to allow for kinetic movement of different parts.") AnnotationAssertion( "NI") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4100113") AnnotationAssertion(rdfs:label "dermal intracranial joint") SubClassOf( ) # Class: (anterior distal condyle of femur) AnnotationAssertion(Annotation( "PHENOSCAPE:NI") "Anatomical projection in the distal region of the femur.") AnnotationAssertion( "NI") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4100114") AnnotationAssertion(rdfs:label "anterior distal condyle of femur") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (spiracular notch) AnnotationAssertion(Annotation( "PHENOSCAPE:NI") "Soft tissue notch/opening lying on a spiracle.") AnnotationAssertion( "NI") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4100115") AnnotationAssertion(rdfs:label "spiracular notch") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (posterior distal condyle of femur) AnnotationAssertion(Annotation( "PHENOSCAPE:NI") "Anatomical projection in the posterior/distal region of the femur.") AnnotationAssertion( "NI") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4100116") AnnotationAssertion(rdfs:label "posterior distal condyle of femur") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (presacral rib) AnnotationAssertion(Annotation( "PHENOSCAPE:NI") "Rib located anterior to the sacral region.") AnnotationAssertion( "NI") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4100117") AnnotationAssertion(rdfs:label "presacral rib") SubClassOf( ) # Class: (trunk rib) AnnotationAssertion(Annotation( "PHENOSCAPE:NI") "Rib located in the trunk (ribcage) area (i.e. excluding cervical and caudal axial series.") AnnotationAssertion( "NI") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4100118") AnnotationAssertion(rdfs:label "trunk rib") SubClassOf( ) # Class: (extratemporal bone) AnnotationAssertion(Annotation( "PHENOSCAPE:NI") "Extratemporal bone: Skull bone in the posterior half of the cranium, bordering the squamosal and opercular.") AnnotationAssertion( "NI") AnnotationAssertion( "postspiracular") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4100119") AnnotationAssertion(rdfs:label "extratemporal bone") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete prezygapophyses) AnnotationAssertion(Annotation( "PHENOSCAPE:NI") "Anteriorly projecting processes allowing de facto contact between consecutive vertebrae (some soft tissues are also present) via articular facets.") AnnotationAssertion( "UBERON:0001079") AnnotationAssertion( "NI") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4100120") AnnotationAssertion(rdfs:label "obsolete prezygapophyses") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (medial blade of ilium) AnnotationAssertion(Annotation( "PHENOSCAPE:ad"^^xsd:string) "The medial surface of the iliac blade. Origin site of the iliofemoralis internus muscle and its homologues.") AnnotationAssertion( "TA Dececchi") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4200000") AnnotationAssertion(rdfs:label "medial blade of ilium") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (postpubis) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "The region of the pubis posterior to the acetabulum.") AnnotationAssertion( "phenoscape:ad") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4200001") AnnotationAssertion(rdfs:comment "In some non-avian reptile this terminology refers to a distinct rear facing process of the pubis. In avians and some closely related theropod taxa this term is used to denote the pubis itself which has been rotated to face backwards.") AnnotationAssertion(rdfs:label "postpubis") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (intertrochanteric fossa) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "Depression on the ventreal side of the femoral head. Associated with the pubioischiofemoralis externus muscle.") AnnotationAssertion( "A.Dececchi") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4200004") AnnotationAssertion(rdfs:label "intertrochanteric fossa") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete postbranchial lamina) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "Medial facing projection or surface on the anterior ( cranial) region of the cleithrum that is often textured or denticled. This process has two primary functions: 1) its shape enhances the vertical strength of the cleithrum and 2) it forms the edge of the gill chamber and helps to direct water after it has passed over the gills (modified from Clack 2012).") AnnotationAssertion( "A.Dececchi") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4200005") AnnotationAssertion(rdfs:label "obsolete postbranchial lamina") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (infraglenoid buttress) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "An anatomical projection ventral to the glenoid fossa on the scapulocoracoid that abuts on the cliethrum (if present).") AnnotationAssertion( "A.Dececchi") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4200006") AnnotationAssertion(rdfs:comment "Can exist in taxa without a cleithrum.") AnnotationAssertion(rdfs:label "infraglenoid buttress") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (transverse pelvic ridge) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "The transverse pelvic ridge is a short crest directly anterior to, and not extending posterior to, the prominent supra-acetabular buttress from Pawley and Warren 2006.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4200007") AnnotationAssertion(rdfs:label "transverse pelvic ridge") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (inter-clavicle joint) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "Joint that articulates left and right clavicles.") AnnotationAssertion( "AD") AnnotationAssertion( "PHENOSCAPE:wd") AnnotationAssertion( "interclavicle joint") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4200008") AnnotationAssertion(rdfs:label "inter-clavicle joint") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (ventral humeral ridge) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "A distinct bony ridge on ventralsurface of the humeral shaft that corresponds to the attachment site of the pectoralis muscle.") AnnotationAssertion( "AD") AnnotationAssertion( "PHENOSCAPE:ad") AnnotationAssertion( "uberon") AnnotationAssertion( "pectoral process") AnnotationAssertion( "UBERON:4200010") AnnotationAssertion(rdfs:label "ventral humeral ridge") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pedal centrale) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "A centrale found in the pes.") AnnotationAssertion( "AD") AnnotationAssertion( "navicular bone of pes") AnnotationAssertion( "PHENOSCAPE:AD") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4200011") AnnotationAssertion(rdfs:label "pedal centrale") SubClassOf( ) SubClassOf( ) # Class: (ectepicondylar flange) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "Flange present of the distal region of the humerus, associated with extensor musculature of forelimb.") AnnotationAssertion( "AD") AnnotationAssertion( "PHENOSCAPE:ni") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4200012") AnnotationAssertion(rdfs:label "ectepicondylar flange") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (flexor surface) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "Surface of a long bone that possess the flexor muscle attachment sites.") AnnotationAssertion( "AD") AnnotationAssertion( "PHENOSCAPE:ni") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4200013") AnnotationAssertion(rdfs:label "flexor surface") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lateral tuber of ulna) AnnotationAssertion(Annotation( "PHENOSCAPE:NI") "Projection on the lateral side of proximal part of the ulna.") AnnotationAssertion( "AD") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4200014") AnnotationAssertion(rdfs:label "lateral tuber of ulna") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (inner digits of foot) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "The medial most digits of the pes.") AnnotationAssertion( "AD") AnnotationAssertion( "PHENOSCAPE:ad") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4200015") AnnotationAssertion(rdfs:comment "In most tetrapods this corresponds to digits II-IV, but the exact identiy of digits in this region varies taxonomically based on digit numbering.") AnnotationAssertion(rdfs:label "inner digits of foot") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete infraglenoid buttress) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "An anatomical projection venteral to the glenoid fossa on the scapulocoracoid that abuts on the cliethrum.") AnnotationAssertion( "AD") AnnotationAssertion( "PHENOSCAPE:ad") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4200017") AnnotationAssertion(rdfs:label "obsolete infraglenoid buttress") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (calcaneal tuber) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "An enlargement of the distal region of the calcaneum that corresponds to the attachment site for the foot extensor muscles.") AnnotationAssertion( "AD") AnnotationAssertion( "PHENOSCAPE:ad") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4200018") AnnotationAssertion(rdfs:label "calcaneal tuber") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (preacetabular process) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "Process on ilium located anteriorly to acetabulum.") AnnotationAssertion( "AD") AnnotationAssertion( "PHENOSCAPE:ad") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4200019") AnnotationAssertion(rdfs:label "preacetabular process") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (suprascapular fossa) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "Fossa on the medial surface on the scapula above the glenoid.") AnnotationAssertion( "AD") AnnotationAssertion( "PHENOSCAPE:ad") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4200020") AnnotationAssertion(rdfs:label "suprascapular fossa") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (astragalus-calcaneum unit) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "Osteological unit consisting of the astragalus and calcaneum.") AnnotationAssertion( "NI") AnnotationAssertion( "PHENOSCAPE:NI") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4200021") AnnotationAssertion(rdfs:label "astragalus-calcaneum unit") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (extracleithrum) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "Narrow bone that lies ventral to the level of insertion of the pectoral fin and is sutured to the posterior edges of both the clavicle and cleithrum. Based on Forey 1998.") AnnotationAssertion( "AD") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4200022") AnnotationAssertion(rdfs:comment "The presence of this bone is a synapomorphy of coelacanth fishes.") AnnotationAssertion(rdfs:label "extracleithrum") SubClassOf( ) SubClassOf( ) # Class: (obsolete suprascapular fossa) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "Fossa located on the medial surface of the scapula above the glenoid.") AnnotationAssertion( "AD") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4200024") AnnotationAssertion(rdfs:label "obsolete suprascapular fossa") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (ascending process of the astragalus) AnnotationAssertion(Annotation( "PHENOSCAPE:NI") "Flattened process of the dorsl surface of the astragalus which contacts the tibia anteriorly.") AnnotationAssertion( "AD") AnnotationAssertion( "PHENOSCAPE:NI") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4200025") AnnotationAssertion(rdfs:label "ascending process of the astragalus") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (supraglenoid foramen) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "Foramen that perforates supraglenoid buttress.") AnnotationAssertion( "ad") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4200026") AnnotationAssertion(rdfs:label "supraglenoid foramen") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (supraglenoid buttress) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "A bony projection dorsal to the glenoid articulation on the scapulocoracoid.") AnnotationAssertion( "AD") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4200027") AnnotationAssertion(rdfs:comment "In basal tetrapodomorphs this structure braces the scapula on the cleithrum, but this function is lost in derived tetrapods.") AnnotationAssertion(rdfs:label "supraglenoid buttress") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (adductor blade) AnnotationAssertion(Annotation( "PHENOSCAPE:AD") "A prominent ridge in basal tetrapods on the ventral side of the femur that includes the fourth trochater, internal trochanter and the adductor crest (based on Coates, 1996).") AnnotationAssertion( "AD") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4200028") AnnotationAssertion(rdfs:label "adductor blade") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (adductor crest) AnnotationAssertion(Annotation( "PHENOSCAPE:AD") "A bony crest on venteral side of femur that is the attachment site for the adductor muscles.") AnnotationAssertion( "AD") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4200029") AnnotationAssertion(rdfs:label "adductor crest") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (antitrochanter) AnnotationAssertion(Annotation( "PHENOSCAPE:NI") "Raised surface at the posterior portion of the acetabulum (see Nesbitt, 2011).") AnnotationAssertion( "AD") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4200030") AnnotationAssertion(rdfs:label "antitrochanter") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (caudalipuboischiotibialis) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "Muscle that is associated with tail flexion. Orginates on one of the first post sacral vertebrae posteriorly and inserts on the posterior edge of the m.puboischiotibialis. (modified from Duellman and Trueb 1994).") AnnotationAssertion( "AD") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4200031") AnnotationAssertion(rdfs:comment "To Do: add attachment site terms to ext") AnnotationAssertion(rdfs:label "caudalipuboischiotibialis") SubClassOf( ) # Class: (clavicle blade) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "Expanded and flattened ventral region of clavicle bone.") AnnotationAssertion( "Ad") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4200032") AnnotationAssertion(rdfs:label "clavicle blade") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (cnemial crest) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "Longitudnal bony ridge on tibia, attachment site of the major extensor muscle of the hind limb.") AnnotationAssertion( "AD") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4200034") AnnotationAssertion(rdfs:label "cnemial crest") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (internal trochanter) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "A boney projection on the internal diaphysis of the femur anterior or medial to the intertrochanteric fossa, below the femoral head. Muscle attachment site for ventral muscle mass notably the puboischiofemoralis externus. Modified from Romer 1956.") AnnotationAssertion( "AD") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4200036") AnnotationAssertion(rdfs:label "internal trochanter") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (supinator process) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "A bony process that corresponds to the attachment site for the forelimb supinator muscles in tetrapods, distal to the deltopectoral crest and anterior to the radial condyle.") AnnotationAssertion( "AD") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4200037") AnnotationAssertion(rdfs:label "supinator process") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (subscapular fossa) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "A marked depression on the medial side of the scapula blade, often opposite the glenoid region.") AnnotationAssertion( "AD") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4200038") AnnotationAssertion(rdfs:label "subscapular fossa") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (supraacetabular buttress) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "A bony protuberance dorsal to the acetabulum on the ilium, confluent with the supraacetabular crest (when present). Acts as a bone brace to prevent excessive femoral abduction and the origin site for part of the M. iliofemoralis.") AnnotationAssertion( "AD") AnnotationAssertion( "acetabular buttress") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4200039") AnnotationAssertion(rdfs:label "supraacetabular buttress") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (aponeurosis palmaris) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "The palmar aponeurosis is a fibrotendinous complex that functions as the tendinous extension of the palmaris longus, when present, and as a strong stabilizing structure for the palmar skin of the hand. It has five longitudinal slips that project into the base of each digit and a deeper transverse portion that crosses the palm at the proximal end of the metacarpals bones (from Wikipedia).") AnnotationAssertion( "AD") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4200041") AnnotationAssertion(rdfs:label "aponeurosis palmaris") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (brevis shelf) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "Anatomical projection on the ilium, anchoring caudal muscles.") AnnotationAssertion( "AD") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4200042") AnnotationAssertion(rdfs:label "brevis shelf") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (brevis fossa) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "Fossa located on the brevis shelf.") AnnotationAssertion( "AD") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4200043") AnnotationAssertion(rdfs:label "brevis fossa") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (articular surface for the calcaneum on the astragalus) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "Contact surface between the calcaneum and the astragalus located on the astragalus.") AnnotationAssertion( "AD") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4200044") AnnotationAssertion(rdfs:label "articular surface for the calcaneum on the astragalus") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (articular surface for the astragalus on the calcaneum) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "Contact surface between the calcaneum and the astragalus located on the calcaneum.") AnnotationAssertion( "AD") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4200045") AnnotationAssertion(rdfs:label "articular surface for the astragalus on the calcaneum") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (astragalo-calcaneal canal) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "The astragalo-calcaneal canal forms a foramen between the articulated astragalus and calcaneum when the canal is ossified (Nesbitt, 2011).") AnnotationAssertion( "AD") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4200046") AnnotationAssertion(rdfs:label "astragalo-calcaneal canal") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (attachment site) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "Morphological struture denoting the exent of an attachment site for a soft tissue on a skeletal element.") AnnotationAssertion( "AD") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4200047") AnnotationAssertion(rdfs:label "attachment site") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (bicipital crest) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "Anatomical projection that is an expansion on the proximal region of the humerus.") AnnotationAssertion( "crista bicipitalis") AnnotationAssertion( "crista tuberculi majoris") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4200048") AnnotationAssertion(rdfs:comment "Origin of the aponeursis of humeral head of the M. biceps brachii. From Bamuel et al. 1993") AnnotationAssertion(rdfs:label "bicipital crest") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (cartilago sesamoides) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "A sesamoid found in the found in the ligamentum calcanei of a wide variety of frogs. (based on Nussbaum, R. A. 1982.") AnnotationAssertion( "AD") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4200049") AnnotationAssertion(rdfs:label "cartilago sesamoides") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (cotyla) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "A cup shaped articular surface on a bone.") AnnotationAssertion( "AD") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4200050") AnnotationAssertion(rdfs:label "cotyla") SubClassOf( ) # Class: (cotyloid notch) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "A notch or opening in the ventral part of the acetabular rim.") AnnotationAssertion( "AD") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4200051") AnnotationAssertion(rdfs:label "cotyloid notch") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (crista tibiofibularis) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "Tuberosity on the posterior surface of the lateral femoral condyle.") AnnotationAssertion( "AD") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4200052") AnnotationAssertion(rdfs:label "crista tibiofibularis") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (ectepicondylar foramen) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "Formen present on the ectepicondyle of the humerus.") AnnotationAssertion( "AD") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4200060") AnnotationAssertion(rdfs:label "ectepicondylar foramen") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (ectocondylar tubercle) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "Posteriorly projecting bony tubercle that is located proximal to the lateral condyle of the femur.") AnnotationAssertion( "AD") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4200063") AnnotationAssertion(rdfs:label "ectocondylar tubercle") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (prepubic element) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "A small plate of cartilage synchondrotically united with the pubis. Modified from Baez and Harrison 2005.") AnnotationAssertion( "AD") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4200068") AnnotationAssertion(rdfs:label "prepubic element") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (sternal keel) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "The vertical plate of bone or cartilage attached to the median line of the sternum. Modified from Baumel et al. 1993.") AnnotationAssertion( "AD") AnnotationAssertion( "carina") AnnotationAssertion( "carina sterni") AnnotationAssertion( "crista sterni") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4200069") AnnotationAssertion(rdfs:comment "An enlarged ossified keel is found in most, but not all, volant birds.") AnnotationAssertion(rdfs:label "sternal keel") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (trunk armor pectoral fenestra) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "An opening in the dermal armour of basal gnathostomes that encloses the pectoral fins. (modified from Young 2010).") AnnotationAssertion( "AD") AnnotationAssertion( "trunk armour pectoral fenestra") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4200076") AnnotationAssertion(rdfs:comment "Disjoint from 'pectoral fenestra' of Amphibians (AAO_0000779).") AnnotationAssertion(rdfs:label "trunk armor pectoral fenestra") SubClassOf( ) # Class: (obsolete posterior iliac process) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "Distinct posterior most of the two 'double heads' of the blade of the ilium.") AnnotationAssertion( "AD") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4200077") AnnotationAssertion(rdfs:label "obsolete posterior iliac process") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (clavicular facet) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "A notch for the articulation of the clavicle on other girdle elements.") AnnotationAssertion( "AD") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4200078") AnnotationAssertion(rdfs:label "clavicular facet") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (dorsal iliac process) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "Posteriordorsal process of the ilium.") AnnotationAssertion( "AD") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4200079") AnnotationAssertion(rdfs:comment "It spresences gives the ilium a 'double headed' appearence.") AnnotationAssertion(rdfs:label "dorsal iliac process") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (fibular crest) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "A bony projection on the lateral side of the tibia, allowing contact between the later and the fibula.") AnnotationAssertion( "AD") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4200080") AnnotationAssertion(rdfs:label "fibular crest") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (postaxial centrale) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "Centrale in the postaxial region of the mesopodium.") AnnotationAssertion( "AD") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4200083") AnnotationAssertion(rdfs:comment "The paried limbs have a main axis running proximodistally trough the stylopodiam element (humerus/femur). from the zeugopodium distally elements can be divided into preaxial (on the radius/tibia side) and postaxial (ulna/fibula) sides. The exact orientation of these axises vary depending on the orientation of the limb in a neutral position.") AnnotationAssertion(rdfs:label "postaxial centrale") SubClassOf( ) # Class: (preaxial centrale) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "Centrale in the preaxial side of the mesopodium.") AnnotationAssertion( "AD") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4200084") AnnotationAssertion(rdfs:comment "The paried limbs have a main axis running proximodistally trough the stylopodiam element (humerus/femur). from the zeugopodium distally elements can be divided into preaxial (on the radius/tibia side) and postaxial (ulna/fibula) sides. The exact orientation of these axises vary depending on the orientation of the limb in a neutral position.") AnnotationAssertion(rdfs:label "preaxial centrale") SubClassOf( ) # Class: (obsolete glenoid head of scapula) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "The scapula's contribution to the glenoid fossa.") AnnotationAssertion( "AD") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4200085") AnnotationAssertion(rdfs:comment "replaced by 'pars glenoidalis of scapula'") AnnotationAssertion(rdfs:label "obsolete glenoid head of scapula") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (iliac neck) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "A constricted region of the ilium which is dorsal to the acetabulular region. Prior to the expansion of the iliac blade.") AnnotationAssertion( "AD") AnnotationAssertion( "neck of ilium") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4200086") AnnotationAssertion(rdfs:label "iliac neck") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (iliac peduncle) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "Bony projection that is part of the dorsal surface of the ischim, where it articulates with the ilium.") AnnotationAssertion( "AD") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4200087") AnnotationAssertion(rdfs:label "iliac peduncle") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (iliac peduncle of the pubis) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "Bony projection that is part of the dorsal surface of the pubis where it meets the ilium.") AnnotationAssertion( "AD") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4200088") AnnotationAssertion(rdfs:label "iliac peduncle of the pubis") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (fibular facet of the calcaneum) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "Articular surface on calcaneum for the fibula.") AnnotationAssertion( "AD") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4200089") AnnotationAssertion(rdfs:label "fibular facet of the calcaneum") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (fibular facet of the astragalus) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "Articular surface on the astragalus for the fibula.") AnnotationAssertion( "AD") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4200090") AnnotationAssertion(rdfs:label "fibular facet of the astragalus") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (ethomosphenoid region) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "Region consisitng of the ethmoid and sphenoid bones.") AnnotationAssertion( "AD") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4200091") AnnotationAssertion(rdfs:label "ethomosphenoid region") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (flexor tubercle of ungual) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "Eminence on the proximo-dorsal surface of the ungual, for attachment of flexor muscles.") AnnotationAssertion( "AD") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4200092") AnnotationAssertion(rdfs:label "flexor tubercle of ungual") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (inner digits of hand) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "The medial most digit of the manus skeleton.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4200094") AnnotationAssertion(rdfs:comment "In most taxa this is digits II-IV, but this varies based on the number of digits and thier identity in the taxa examined.") AnnotationAssertion(rdfs:label "inner digits of hand") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (infraspinous process) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "Process on infraspinous (region below the spine) of scapula.") AnnotationAssertion( "AD") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4200095") AnnotationAssertion(rdfs:label "infraspinous process") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (intercondylar fossa) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "The deep fossa between the femoral condyles in which the cruciate ligaments are attached. From Medilexicon.com.") AnnotationAssertion( "AD") AnnotationAssertion( "femoral groove") AnnotationAssertion( "femoral sulcus") AnnotationAssertion( "femoropatellar groove") AnnotationAssertion( "patellar groove") AnnotationAssertion( "patellar sulcus") AnnotationAssertion( "patellofemoral groove") AnnotationAssertion( "trochlea of femur") AnnotationAssertion( "trochlear groove of femur") AnnotationAssertion( "trochlear sulcus of femur") AnnotationAssertion( "trochlear surface of femur") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4200096") AnnotationAssertion(rdfs:label "intercondylar fossa") SubClassOf( ) # Class: (intermediate spine) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "Spine ventrally located on the body and not part of the pectoral, pelvic or anal fins.") AnnotationAssertion( "Ad") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4200097") AnnotationAssertion(rdfs:label "intermediate spine") SubClassOf( ) # Class: (ischial foot) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "Expansion of the distal region of the ischium.") AnnotationAssertion( "Ad") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4200098") AnnotationAssertion(rdfs:label "ischial foot") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lateral extrascapular) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "The most lateral of the paired series of extrascapular bones and is the bone where the intersection of the otic, postotic and extrascapular or supratemporal canals occur.") AnnotationAssertion( "AD") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4200099") AnnotationAssertion(rdfs:label "lateral extrascapular") SubClassOf( ) # Class: (latissimus dorsi process) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "A bony process on the dorsal side of the proximal region of the humerus which corresponds to the insertion site of the Latissimus dorsi muscle.") AnnotationAssertion( "AD") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4200100") AnnotationAssertion(rdfs:label "latissimus dorsi process") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (m.scapulotriceps) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "Muscle that represents one branch of the larger triceps brachii, origination site near the glenoid fossa on the scapula.") AnnotationAssertion( "AD") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4200101") AnnotationAssertion(rdfs:label "m.scapulotriceps") SubClassOf( ) # Class: (median dorsal plate) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "Dermal armour plate that is situated behind the head and constitute the dorsal most portion of the dermal shoulder girdle. Modified from Brazeau 2009, Young 2010.") AnnotationAssertion( "AD") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4200102") AnnotationAssertion(rdfs:comment "Present in some basal gnathostomes.") AnnotationAssertion(rdfs:label "median dorsal plate") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (median extrascapular) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "The medial of the the paired series of extrascapular bones which carries the extrascapular or supratemporal canal.") AnnotationAssertion( "AD") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4200103") AnnotationAssertion(rdfs:label "median extrascapular") SubClassOf( ) # Class: (metacarpal extensor pit) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "Pits located on the proximodorsal part of metacarpals denoting the attachemnt sites for ligaments.") AnnotationAssertion( "AD") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4200104") AnnotationAssertion(rdfs:label "metacarpal extensor pit") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (nerve foramen) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "Opening and/or passageway for nerve(s) in bone.") AnnotationAssertion( "AD") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4200105") AnnotationAssertion(rdfs:label "nerve foramen") SubClassOf( ) # Class: (muscle scar) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "A distinct region on a skeletal element that demarcates the attachment area of a muscle or tendon. Often associated with rugosity or tubercles.") AnnotationAssertion( "AD") AnnotationAssertion( "muscle insertion site") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4200106") AnnotationAssertion(rdfs:comment "While this term is applicable to both vertebrates and invertebrates, the qualities used to demarcate muscle attachment areas between the two groups may not be identical.") AnnotationAssertion(rdfs:label "muscle scar") SubClassOf( ) # Class: (obturator process of ischium) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "Process located on the ventral shaft of the ischium that denotes the attachment site of the pubio-ischio-femoralis externus.") AnnotationAssertion( "AD") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4200107") AnnotationAssertion(rdfs:comment "In birds the pubio-ischio-femoralis externus is sometimes called the M.oburatorius lateralis and medialis.") AnnotationAssertion(rdfs:label "obturator process of ischium") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (outer digit of hand) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "The flanking digit of the manus.") AnnotationAssertion( "AD") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4200108") AnnotationAssertion(rdfs:comment "In most taxa this is digits I and V, but this varies based on the number of digits in the manus") AnnotationAssertion(rdfs:label "outer digit of hand") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (outer digits of pes) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "The flanking digit of the pes.") AnnotationAssertion( "AD") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4200109") AnnotationAssertion(rdfs:comment "In most taxa this is digits I and V, but this varies based on the number of digits in the pes.") AnnotationAssertion(rdfs:label "outer digits of pes") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (prepectoral spine) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "Spine located anterior to the pectoral fin.") AnnotationAssertion( "AD") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4200110") AnnotationAssertion(rdfs:label "prepectoral spine") SubClassOf( ) # Class: (prepelvic fin spine) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "Spine located anterior to the pelvic fin and posterior to the pectoral fin.") AnnotationAssertion( "AD") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4200111") AnnotationAssertion(rdfs:label "prepelvic fin spine") SubClassOf( ) # Class: (prepectoral space) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "A triangular, anteroventrally facing area developed between the preaxial margin of the humerus and the proximal limb of the ventral humeral ridge. Based on Callier et al. 2009 .") AnnotationAssertion( "AD") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4200112") AnnotationAssertion(rdfs:label "prepectoral space") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (prepubic process) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "Elongate process forming the anteriormost part of the pubis.") AnnotationAssertion( "AD") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4200114") AnnotationAssertion(rdfs:label "prepubic process") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (presupracleithrum) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "An skeletal element of the upper pectoral girdle overlapped by the opercular and posttemporal bones.") AnnotationAssertion( "AD") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4200115") AnnotationAssertion(rdfs:label "presupracleithrum") SubClassOf( ) SubClassOf( ) # Class: (pteroid) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "Slender bone connected to the carpus in pterosaurs. The bone, which may have pointed forward, supports the propatagium, a membrane located between the carpus and pectoral region.") AnnotationAssertion( "AD") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4200116") AnnotationAssertion(rdfs:comment "This structure is unique to pterosaurs. There is debate wherther this structure is derived from metacarpal I, the carpal bones or is a a novel bone. See Unwin et al. 1996") AnnotationAssertion(rdfs:label "pteroid") SubClassOf( ) # Class: (pubic boot) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "Anteroposterior expansion of the distal region of the pubis.") AnnotationAssertion( "AD") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4200117") AnnotationAssertion(rdfs:label "pubic boot") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pubic peduncle) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "Bony projection on the anterior portion of the ilium, anterior to the acetabulum that articulates with the pubis.") AnnotationAssertion( "AD") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4200118") AnnotationAssertion(rdfs:label "pubic peduncle") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pubis-ischium contact) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "Contact zone between the pubis and the ischium.") AnnotationAssertion( "AD") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4200119") AnnotationAssertion(rdfs:label "pubis-ischium contact") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (puboischiadic plate) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "A broad expnase of bone incorperating both the pubis and the ischium. Origin site for ventral limb muscle including the pubioishciofemoralis externus. Modified from Romer 1956 .") AnnotationAssertion( "AD") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4200120") AnnotationAssertion(rdfs:label "puboischiadic plate") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (puboischiotibialis muscle) AnnotationAssertion(Annotation( ) Annotation( "PHENOSCAPE:ad"^^xsd:string) "A muscle that originates from the puboischaidic plate and inserts on the tibia. Acts to adduct the hindlimb. Is anterior to cloacal gland in males. Modified from De luliis and Pulera.") AnnotationAssertion( "Homologous to mammalian gracilis [ISBN:0073040584]") AnnotationAssertion( "UBERON:0011914") AnnotationAssertion( "M. puboischiotibialis") AnnotationAssertion(Annotation( "PHENOSCAPE:ad"^^xsd:string) "puboischiotibialis") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4200121") AnnotationAssertion(rdfs:label "puboischiotibialis muscle") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pubotibialis) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "Originates in on the pubic cartillage and inserts on the tibia, acts to adduct the hindlimb. Modified from De luliis and Pulera.") AnnotationAssertion( "AD") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4200122") AnnotationAssertion(rdfs:label "pubotibialis") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (scapular process) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "The dorsal extension of the scapulocoracoid above the level of the glenoid region in basal gnathostomes. Modified from Brazeau 2009.") AnnotationAssertion( "AD") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4200123") AnnotationAssertion(rdfs:label "scapular process") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (sternal trabecula) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "Anatomical projections that are elongate processes in the mid and posterior regions of the sternum.") AnnotationAssertion( "AD") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4200124") AnnotationAssertion(rdfs:label "sternal trabecula") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (supraacetabular crest) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "Anatomical projection (crest) located dorsaly to the acetabulum.") AnnotationAssertion( "AD") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4200125") AnnotationAssertion(rdfs:label "supraacetabular crest") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (supraacetabular rim) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "Bony rim that is part of the supraacetabular region.") AnnotationAssertion( "AD") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4200126") AnnotationAssertion(rdfs:label "supraacetabular rim") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (suprascapula foramen) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "The route through which structures pass between the base of the neck and the posterior scapular region. It is formed by the suprascapular notch of the scapula and the superior transverse scapular ligament. From http://medical-dictionary.thefreedictionary.com/suprascapular+foramen.") AnnotationAssertion( "AD") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4200127") AnnotationAssertion(rdfs:label "suprascapula foramen") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (synarcual region of vertebral column) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "Series of fused cervical vertebrae or vertebral elements. Based on Jeffrey C. Carrier. Biology of Sharks and Their Relatives, 2012. CRC Press.") AnnotationAssertion( "synarcuum") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4200128") AnnotationAssertion(rdfs:comment "'The synarcual is a structure incorporating the anterior vertebrae of the axial skeleton and occurs in vertebrate taxa such as the fossil group Placodermi and the Chondrichthyes (Holocephali, Batoidea)' DOI:10.1007/s00435-012-0169-9") AnnotationAssertion(rdfs:label "synarcual region of vertebral column") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (synarcual region) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "Axial subdivision that includes a series of fused cervical vertebrae or vertebral elements. Based on Jeffrey C. Carrier. Biology of Sharks and Their Relatives, 2012. CRC Press.") AnnotationAssertion( "AD") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4200129") AnnotationAssertion(rdfs:label "synarcual region") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (tibial facet of astragalus) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "Facet for the articulation of the tibia on the astragalus (talus).") AnnotationAssertion( "AD") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4200130") AnnotationAssertion(rdfs:label "tibial facet of astragalus") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (trochanteric shelf) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "Anatomical projection on the anterolateral region of the proximal end of the femur.") AnnotationAssertion( "AD") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4200131") AnnotationAssertion(rdfs:comment "In Archosaurs was originally a possible insertion site for the m. iliofemoralis externus (Hutchinson 2001). In more derived dinosaurs this becomes a distinct process possibly providing the attachment surface for mm. iliotrochanteri in addition to m. iliofemoralis externus (Carrano and Hutchinson 2002)") AnnotationAssertion(rdfs:label "trochanteric shelf") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete tuber) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "OBSOLETE Eminence or swelling on anatomical surface.") AnnotationAssertion( "UBERON:0005813") AnnotationAssertion( "AD") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4200132") AnnotationAssertion(rdfs:comment "Term is redundant with \"tubercle\" (UBERON:0005813).") AnnotationAssertion(rdfs:label "obsolete tuber") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (crest) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "A ridge or similar projection rising above the surface of an anatomical structure.") AnnotationAssertion( "AD") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4200133") AnnotationAssertion(rdfs:label "crest") SubClassOf( ) # Class: (antimere) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "A part in the body of an organism that corresponds to an opposite symmetrical part.") AnnotationAssertion( "AD") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4200134") AnnotationAssertion(rdfs:label "antimere") SubClassOf( ) # Class: (puboischiadic bar) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "A transverse flattened or cylindrical plate in the posterior body wall opposite the anterior ends of the pelvic fins, in front of the vent and at the posterior end of the body cavity, that supports a few anterior pelvic radials and a basal cartilage, the basipterygium. from Leonard J. V. Compagno. 2001. Sharks of the World: An Annotated and Illustrated Catalogue of Shark Species Known to Date. Volume 2.") AnnotationAssertion( "AD") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4200135") AnnotationAssertion(rdfs:comment "Potentially homologous to the pelvic girdle.") AnnotationAssertion(rdfs:label "puboischiadic bar") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (prepollical element) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "Is a endochondral element that is part of the mesopodial skeleton and is contained within the prepollex which in some taxa appears as a pre-axial digit-like projection anterior to the first digit of the hand.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4200140") AnnotationAssertion(rdfs:label "prepollical element") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (prehallical element) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "Is a endochondral element that is part of the mesopodial skeleton and is contained within the prehallux which in some taxa appears as a pre-axial digit-like projection anterior to the first digit of the foot.") AnnotationAssertion( "DB") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4200141") AnnotationAssertion(rdfs:label "prehallical element") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: () AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (accessory foramen) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "Foramen found on the humerus of tetrapodomorphs beyond the entepicondyle and ectepicondyle foramen. Often denoted as foramen 'c' and 'd' after Jarvik 1996.") AnnotationAssertion( "AD") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4200150") AnnotationAssertion(rdfs:label "accessory foramen") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (toe disc) AnnotationAssertion( "AD") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4200151") AnnotationAssertion(rdfs:label "toe disc") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (intertarsale sesamoid) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "Sesamoid bone in the tarsal region.") AnnotationAssertion( "AD") AnnotationAssertion( "os sesamoides tarsale") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4200152") AnnotationAssertion(rdfs:label "intertarsale sesamoid") SubClassOf( ) SubClassOf( ) SubClassOf( ) # Class: (metatarsal bone of digit 6) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4200153") AnnotationAssertion(rdfs:label "metatarsal bone of digit 6") SubClassOf( ) SubClassOf( ) # Class: (metapodium bone 6) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4200154") AnnotationAssertion(rdfs:label "metapodium bone 6") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (metapodium bone 7) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4200155") AnnotationAssertion(rdfs:label "metapodium bone 7") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (metapodium bone 8) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4200156") AnnotationAssertion(rdfs:label "metapodium bone 8") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (metatarsal bone of digit 7) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4200157") AnnotationAssertion(rdfs:label "metatarsal bone of digit 7") SubClassOf( ) SubClassOf( ) # Class: (metatarsal bone of digit 8) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4200158") AnnotationAssertion(rdfs:label "metatarsal bone of digit 8") SubClassOf( ) SubClassOf( ) # Class: (ventral ridge system) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "A collection of attached ridges on the ventrl surface of the femur consisting of the internal and fourth trochanters plus the adductor blade and crest. Most notible in early amniotes (based on Romer 1956).") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4200159") AnnotationAssertion(rdfs:label "ventral ridge system") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (hindlimb interepipodial space) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "The space between the bones of the tibia and the fibula.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4200166") AnnotationAssertion(rdfs:label "hindlimb interepipodial space") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (mesial pelvic ridge) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4200167") AnnotationAssertion(rdfs:label "mesial pelvic ridge") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete neck of ilium) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4200168") AnnotationAssertion(rdfs:label "obsolete neck of ilium") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (process 2) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "Process on the humerus of basal tetrapods, anterior to the entepicondyle and associated with subscapularis muscle (based on Coates 1996).") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4200169") AnnotationAssertion(rdfs:label "process 2") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (process 3 of entepicondyle) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "Process on the humerus of basal tetrapods, anterior to the entepicondyle and adjacent to process 4 of entepicondyle (see Coates 1996).") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4200170") AnnotationAssertion(rdfs:label "process 3 of entepicondyle") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (process 4 of entepicondyle) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "Process on the humerus of basal tetrapods, anterior to the entepicondyle and adjacent to process 3 of entepicondyle (see Coates 1996).") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4200171") AnnotationAssertion(rdfs:label "process 4 of entepicondyle") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (neck of humerus) AnnotationAssertion( "FMA:23356") AnnotationAssertion( "NCIT:C33164") AnnotationAssertion(Annotation( "FMA:23356") "collum anatomicum (Humerus)") AnnotationAssertion(Annotation( "FMA:23356") Annotation( "FMA:TA"^^xsd:string) Annotation( ) "collum anatomicum humeri") AnnotationAssertion( "humeral neck") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( "FMA:23356") "anatomic neck of humerus") AnnotationAssertion( "UBERON:4200172") AnnotationAssertion(rdfs:label "neck of humerus") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (dorsal ridge) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4200173") AnnotationAssertion(rdfs:label "dorsal ridge") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (distal condyle of humerus) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "The area encompassing the radial and ulnar condyles of the humerus.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4200174") AnnotationAssertion(rdfs:label "distal condyle of humerus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (supraglenoid region) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4200175") AnnotationAssertion(rdfs:label "supraglenoid region") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (ascending process of clavicle) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "A bony dorsal extension of the clavicle.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4200176") AnnotationAssertion(rdfs:label "ascending process of clavicle") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (supracondyle tubercle) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4200177") AnnotationAssertion(rdfs:label "supracondyle tubercle") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete manual claw) AnnotationAssertion( "UBERON:0009565") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4200179") AnnotationAssertion(rdfs:comment "Term is redundant with 'nail of manual digit' (UBERON:0009565).") AnnotationAssertion(rdfs:label "obsolete manual claw") AnnotationAssertion(rdfs:seeAlso "https://github.com/obophenotype/uberon/issues/1699") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (semilunate carpal) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "The moon shaped fusion of distal carpals 1 and 2 found in some theropod dinosaurs, permitting greater wrist mobility.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4200180") AnnotationAssertion(rdfs:label "semilunate carpal") SubClassOf( ) # Class: (astragalus head) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "The region of the astragalus/ talus that carries the articular surface for the navicular.") AnnotationAssertion( "talus head") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4200181") AnnotationAssertion(rdfs:label "astragalus head") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lateral tubercle of astragalus) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4200182") AnnotationAssertion(rdfs:label "lateral tubercle of astragalus") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (bicipital tuberosity) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "The rough eminence which is on the anterior inner aspect of the neck of the radius and into which the tendon of the biceps is inserted. From http://www.merriam-webster.com/medical.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4200183") AnnotationAssertion(rdfs:label "bicipital tuberosity") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (ulnar tuberosity) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "His roughened area of bone sits distomedially at the base of the coronoid process. It is the attachment site for the brachialis muscle. From http://www.anatomyexpert.com/.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4200184") AnnotationAssertion(rdfs:label "ulnar tuberosity") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (entepicondyle fossa) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "A fossa on the distal humerus proximal to the entepicondyle.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4200185") AnnotationAssertion(rdfs:label "entepicondyle fossa") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (distal keel of metacarpal III) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4200186") AnnotationAssertion(rdfs:label "distal keel of metacarpal III") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete hyperphalangy of manus) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "Increase the number of phalanges per digit beyond their ancestral digital formulas. Modified from Cooper and Dawson 2009.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4200187") AnnotationAssertion(rdfs:comment "This class was obsoleted as it did not represent an anatomical structure") AnnotationAssertion(rdfs:label "obsolete hyperphalangy of manus") AnnotationAssertion(rdfs:seeAlso "https://github.com/obophenotype/uberon/issues/442"^^xsd:anyURI) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (manual toe disc) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4200188") AnnotationAssertion(rdfs:label "manual toe disc") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pedal toe disc) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4200189") AnnotationAssertion(rdfs:label "pedal toe disc") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (zygosphene) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "An articular process on anterior surface of neural arch of vertebrae which fits into zygantrum. Modified from Henderson's dictionary of Biological terms 12th Edition.") AnnotationAssertion( "AD") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4200190") AnnotationAssertion(rdfs:comment "Found in snakes and some lizards.") AnnotationAssertion(rdfs:label "zygosphene") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete humeral facet of the ulna) AnnotationAssertion( "AD") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4200191") AnnotationAssertion(rdfs:label "obsolete humeral facet of the ulna") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (ulnar facet of the humerus) AnnotationAssertion( "AD") AnnotationAssertion( "ulnar facet") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4200192") AnnotationAssertion(rdfs:label "ulnar facet of the humerus") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (posterodorsal process of ilium) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "Anatomical project part of the blade of the ilium that projects posteriorly.") AnnotationAssertion( "AD") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4200193") AnnotationAssertion(rdfs:label "posterodorsal process of ilium") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (intercentrum) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "The anteriormost of the two possible elements found in the tetrapod centrum (when the centrum is not a single element).") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4200194") AnnotationAssertion(rdfs:comment "If there is only one element that makes part of the centrum it can be either the intercentrum (some amphibians) or the pleurocentrum (amniotes) (see Hildebrand and Goslow 's Analysis of Vertebrate structure)") AnnotationAssertion(rdfs:label "intercentrum") SubClassOf( ) # Class: (pleurocentrum) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "The posteriormost of the two possible elements found in the tetrapod centrum (when the centrum is not a single element).") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4200195") AnnotationAssertion(rdfs:comment "If there is only one element that makes part of the centrum it can be either the intercentrum (some amphibians) or the pleurocentrum (amniotes) (see Hildebrand and Goslow 's Analysis of Vertebrate structure)") AnnotationAssertion(rdfs:label "pleurocentrum") SubClassOf( ) # Class: (atlas intercentrum) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "The intercentrum unit of the atlas vertebra.") AnnotationAssertion( "AD") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4200196") AnnotationAssertion(rdfs:label "atlas intercentrum") SubClassOf( ) # Class: (anterior humeral ridge) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "Ridge or keel at the proximal end of the humerus. (see Laurin 1998).") AnnotationAssertion( "AD") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4200197") AnnotationAssertion(rdfs:label "anterior humeral ridge") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (incisor process) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "Process that is part of the mandible that is in close proximity to the incisor teeth.") AnnotationAssertion( "AD") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4200198") AnnotationAssertion(rdfs:label "incisor process") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (sallet sensory system) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "Ciliary restraint system in the inner ear that uses sallets instead of the tectorial membrane.") AnnotationAssertion( "AD") AnnotationAssertion( "sallet restraint system") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4200199") AnnotationAssertion(rdfs:label "sallet sensory system") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (humeral facet on the ulna) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "Facet on the ulna for articulation with the ulnar condyle of the humerus.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4200203") AnnotationAssertion(rdfs:label "humeral facet on the ulna") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (humeral facet on radius) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "Facet on the radius for articulation with the radial condyle of the humerus.") AnnotationAssertion( "proximal articular surface of radius") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4200204") AnnotationAssertion(rdfs:label "humeral facet on radius") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete glenoid facet) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4200205") AnnotationAssertion(rdfs:label "obsolete glenoid facet") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (postaxial process of the ulnare) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "A projection on the postaxial region of the ulnare.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4200209") AnnotationAssertion(rdfs:label "postaxial process of the ulnare") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (postaxial process of the femur) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "A projection on the postaxial region of the femur.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4200210") AnnotationAssertion(rdfs:label "postaxial process of the femur") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (postaxial process of the fibula) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "A projection on the postaxial region of the fibula.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4200211") AnnotationAssertion(rdfs:label "postaxial process of the fibula") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pectoral process of humerus) AnnotationAssertion( "uberon") AnnotationAssertion( "pectoral process") AnnotationAssertion( "UBERON:4200212") AnnotationAssertion(rdfs:label "pectoral process of humerus") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (deltoid process) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4200213") AnnotationAssertion(rdfs:label "deltoid process") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (epipodial facet) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "Facets for the articulation of the epipodial (zeugopodial) elements.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4200214") AnnotationAssertion(rdfs:label "epipodial facet") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (suture) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "Line of junction between two parts immovably connected. Modified from Henderson's Dictionary of Biological Terms.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4200215") AnnotationAssertion(rdfs:label "suture") SubClassOf( ) # Class: (fibula facet of femur) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "Facet on the femur for the fibula.") AnnotationAssertion( "fibular fossa") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4200216") AnnotationAssertion(rdfs:label "fibula facet of femur") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (tibial facet of femur) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "Facet on the femur for the tibia.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4200217") AnnotationAssertion(rdfs:label "tibial facet of femur") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (musculotendinous bundle) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "A collection of muscle and tendinous tissue.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4200218") AnnotationAssertion(rdfs:label "musculotendinous bundle") SubClassOf( ) # Class: (middle phalanx of manual digit 1) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4200219") AnnotationAssertion(rdfs:label "middle phalanx of manual digit 1") SubClassOf( ) SubClassOf( ) # Class: (iliac ramus) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4200220") AnnotationAssertion(rdfs:label "iliac ramus") SubClassOf( ) # Class: (growth line) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "Distinct layer that indicate the growth of an organism.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4200221") AnnotationAssertion(rdfs:label "growth line") SubClassOf( ) # Class: (distal groove of humerus) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "Groove along the distal margin of the humerus, ventral to the radial and ulnar condyle.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4200222") AnnotationAssertion(rdfs:label "distal groove of humerus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (foramen C) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "Foramen located on the scapulocoracoid, located just behind the cleithral anteroventral process(the articulation with the cleithrum). Modified from Coates 1996.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4200223") AnnotationAssertion(rdfs:label "foramen C") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (columnar area) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "Modified from Garvey et al. 2005. ' Between the dorsal ridge and the caput humeri is a futher recessed area......that clearly separates the two structures and is slightly separted from the dorsal surface of the entepicondyle, and more specifically from the unfinished bone of the entepicondyle, by a narrow ridge.'.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4200224") AnnotationAssertion(rdfs:label "columnar area") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (scapulohumeralis muscle) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "Muscle found primarily in basal sarcopterygians that runs between teh scapulocoracoid and the humerus. Its exact homologies with more derived shoulder muscles in Tetrapoda is unclear.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4200225") AnnotationAssertion(rdfs:label "scapulohumeralis muscle") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete entepicondyle canal) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4200227") AnnotationAssertion(rdfs:label "obsolete entepicondyle canal") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (excurrent foramen of ectepicondylar foramen) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4200228") AnnotationAssertion(rdfs:label "excurrent foramen of ectepicondylar foramen") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (incurrent foramen of ectepicondylar foramen) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4200229") AnnotationAssertion(rdfs:label "incurrent foramen of ectepicondylar foramen") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (surface of bone) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "An anatomical surface that is part of a bone.") AnnotationAssertion( "bone surface") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4200230") AnnotationAssertion(rdfs:label "surface of bone") AnnotationAssertion(rdfs:label "surface of bone"@en) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (unfinished bone surface) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "A bone surface that is not smooth and periosteal. The usual implication is that the bone was still growing, was covered in cartilage, or both. From Paleos.com.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4200231") AnnotationAssertion(rdfs:label "unfinished bone surface") SubClassOf( ) # Class: (finished bone surface) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "A smooth periosteal bone surface.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4200232") AnnotationAssertion(rdfs:label "finished bone surface") SubClassOf( ) # Class: (dorsal clavicular process) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "A process, extending dorsally from the clavicular plate, that attaches to the cleithrum. Modified from Clack 2012 and Coates 1996.") AnnotationAssertion( "ascending dorsal clavicular process") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4200233") AnnotationAssertion(rdfs:label "dorsal clavicular process") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (precoronoid bone) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4200234") AnnotationAssertion(rdfs:label "precoronoid bone") SubClassOf( ) # Class: (postcoronoid bone) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4200235") AnnotationAssertion(rdfs:label "postcoronoid bone") SubClassOf( ) # Class: (anterior coronoid bone) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4200236") AnnotationAssertion(rdfs:label "anterior coronoid bone") SubClassOf( ) # Class: (posterior coronoid bone) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4200237") AnnotationAssertion(rdfs:label "posterior coronoid bone") SubClassOf( ) # Class: (coronoid fang) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4200238") AnnotationAssertion(rdfs:label "coronoid fang") SubClassOf( ) # Class: (shagreen tooth field) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4200239") AnnotationAssertion(rdfs:label "shagreen tooth field") SubClassOf( ) # Class: (fronto-ethmoidal shield) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4200240") AnnotationAssertion(rdfs:label "fronto-ethmoidal shield") SubClassOf( ) # Class: (postrostral bone) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4200241") AnnotationAssertion(rdfs:label "postrostral bone") SubClassOf( ) # Class: (median postrostral bone) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4200242") AnnotationAssertion(rdfs:label "median postrostral bone") SubClassOf( ) # Class: (surangular pit line) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "...a v-shaped pair of ridges, each carrying three or four smallpores Modified from Ahlberg et al. 2005.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4200243") AnnotationAssertion(rdfs:label "surangular pit line") SubClassOf( ) # Class: (anterior supraorbital bone) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4200244") AnnotationAssertion(rdfs:label "anterior supraorbital bone") SubClassOf( ) # Class: (parasymphysial plate) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "Bone, often with tooth attachments, on the lingual side of the anterior of the lower jaw.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4200245") AnnotationAssertion(rdfs:label "parasymphysial plate") SubClassOf( ) # Class: (mesial parasymphysial foramen) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4200246") AnnotationAssertion(rdfs:label "mesial parasymphysial foramen") SubClassOf( ) # Class: (lateral parasymphysial foramen) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4200247") AnnotationAssertion(rdfs:label "lateral parasymphysial foramen") SubClassOf( ) # Class: (hypophysial region) AnnotationAssertion( "hypophyseal region") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4200248") AnnotationAssertion(rdfs:comment "Region of the endocranium that encompasses the connection between the hypothalamus and the anterior pituitary.") AnnotationAssertion(rdfs:label "hypophysial region") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (meckelian bone) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "The ossification of the Meckel's cartilage.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4200250") AnnotationAssertion(rdfs:label "meckelian bone") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (meckelian foramen) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4200251") AnnotationAssertion(rdfs:label "meckelian foramen") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete maxillary saddle) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "A fossa that is a depression in the proximal end of the maxilla involved in articulation with the palatine [Baldwin, CC and Johnson GD. 1996. Interrelationships of Aulopiformes. Pages 355-404 in MLJ Stiassny, LR Parenti, and DG Johnson, (eds.), Interrelationships of fishes. Academic Press, San Diego, CA.].") AnnotationAssertion( "UBERON:3000652") AnnotationAssertion( "WD") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4300001") AnnotationAssertion(rdfs:label "obsolete maxillary saddle") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (palatine prong) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "A process on the palatine that projects outward and upward and articulates with a depression (maxillary saddle) in the proximal end of the maxilla [Gosline WA et al, 1966; Baldwin, CC and Johnson GD. 1996. Interrelationships of Aulopiformes. Pages 355-404 in MLJ Stiassny, LR Parenti, and DG Johnson, (eds.), Interrelationships of fishes. Academic Press, San Diego, CA.].") AnnotationAssertion( "WD") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4300002") AnnotationAssertion(rdfs:label "palatine prong") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (aphakic space) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "The space in the pupil, which is not occupied by the lens. A rostral aphakic space may enhance the forward binocular field of vision.") AnnotationAssertion( "WD") AnnotationAssertion( ) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4300005") AnnotationAssertion(rdfs:label "aphakic space") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (medial pelvic process) AnnotationAssertion(Annotation( ) "Process that is posteriorly oriented and medially located on the basipterygium. It is a paired projection. [PHENOSCAPE:bf].") AnnotationAssertion( "WD") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4300007") AnnotationAssertion(rdfs:label "medial pelvic process") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (epipleural series) AnnotationAssertion(Annotation( "PHENOSCAPE:bf") "Anatomical cluster that consists of the epipleurals.") AnnotationAssertion( "WD") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4300008") AnnotationAssertion(rdfs:label "epipleural series") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (clavus) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "A rudder-like lobe formed from extensions of dorsal and anal fin rays.") AnnotationAssertion( "pseudo-caudal fin") AnnotationAssertion( "pseudocaudal fin") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4300012") AnnotationAssertion(rdfs:comment "Found in ocean sunfishes (Molidae) which lack a caudal fin. TODO: consider relationship to fin.") AnnotationAssertion(rdfs:label "clavus") SubClassOf( ) # Class: (dorsal cleithrum) AnnotationAssertion( "WD") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4300014") AnnotationAssertion(rdfs:comment "According to Forey 1988, History of the Coelacanth fish: 'In placoderms there are large overlapping plates which completely encircle the body and superficially may be matched with those in osteichthyans (Stensio, 1959; Forey, 1980; Jarvik, 1980). Thus, the anterior median ventral, anteroventral and anterior lateral of placoderms lie in the same positions as the interclavicle, clavicle (ventral cleithrum) and cleithrum (dorsal cleithrum) of osteichthyans.'") AnnotationAssertion(rdfs:label "dorsal cleithrum") SubClassOf( ) SubClassOf( ) # Class: (ventral cleithrum) AnnotationAssertion( "WD") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4300015") AnnotationAssertion(rdfs:comment "According to Forey 1988, History of the Coelacanth fish: 'In placoderms there are large overlapping plates which completely encircle the body and superficially may be matched with those in osteichthyans (Stensio, 1959; Forey, 1980; Jarvik, 1980). Thus, the anterior median ventral, anteroventral and anterior lateral of placoderms lie in the same positions as the interclavicle, clavicle (ventral cleithrum) and cleithrum (dorsal cleithrum) of osteichthyans.'") AnnotationAssertion(rdfs:label "ventral cleithrum") SubClassOf( ) SubClassOf( ) # Class: (rostrodermethmoid) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "Dermal bone formed by the fusion of dermethmoids and rostral bones [Fink, W L Weitzman, S H. 1982. Relationships of the stomiiform fishes (Teleostei), with a description of Diplophos Bulletin of The Museum of Comparative Zoology 150:31-93. http://www.biodiversitylibrary.org/part/28697].") AnnotationAssertion( "WD") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4300017") AnnotationAssertion(rdfs:label "rostrodermethmoid") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (anterolateral plate) AnnotationAssertion(Annotation( "ISBN:3-89937-052-X") "Dermal bone that is part of the scapular complex in placoderm fishes.") AnnotationAssertion( "WD") AnnotationAssertion(Annotation( "ISBN:3-89937-052-X") "AL") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4300021") AnnotationAssertion(rdfs:label "anterolateral plate") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (anteroventral plate) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "Dermal bone that is part of the scapular complex in placoderms, located in the ventral armour adjacent to the interolateral (IL) and anterior ventrolateral (AVL) plates.") AnnotationAssertion( "WD") AnnotationAssertion( "AV") AnnotationAssertion( "anterior ventral plate") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4300022") AnnotationAssertion(rdfs:label "anteroventral plate") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (interolateral plate) AnnotationAssertion(Annotation( "ISBN:3-89937-052-X") "Dermal bone that is part of the scapular complex in placoderms, and located anterior to the anterior ventrolateral (AVL) plate.") AnnotationAssertion( "WD") AnnotationAssertion(Annotation( "ISBN:3-89937-052-X") "IL") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4300023") AnnotationAssertion(rdfs:label "interolateral plate") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (spinal plate) AnnotationAssertion(Annotation( "ISBN:3-89937-052-X") "Dermal bone that is part of the scapular complex in placoderms, and located lateral to the anterior ventrolateral (AVL) plate.") AnnotationAssertion( "WD") AnnotationAssertion(Annotation( "ISBN:3-89937-052-X") "Sp") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4300024") AnnotationAssertion(rdfs:label "spinal plate") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (posterior dorsolateral plate) AnnotationAssertion(Annotation( "ISBN:3-89937-052-X") "Dermal bone that is part of the scapular complex in placoderms, located posterior to the main components of the complex.") AnnotationAssertion( "WD") AnnotationAssertion(Annotation( "ISBN:3-89937-052-X") "PDL") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4300025") AnnotationAssertion(rdfs:label "posterior dorsolateral plate") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (anterior ventrolateral plate) AnnotationAssertion(Annotation( "ISBN:3-89937-052-X") "Dermal bone that is part of the ventral region of scapular complex in placoderms (see also posterior ventrolateral plate). In most placoderms with a long ventral armour, the ventral wall is typically composed of two large paired lateral plates (anterior and posterior ventrolaterals).") AnnotationAssertion( "WD") AnnotationAssertion(Annotation( "ISBN:3-89937-052-X") "AVL") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4300026") AnnotationAssertion(rdfs:label "anterior ventrolateral plate") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (posterior ventrolateral plate) AnnotationAssertion(Annotation( "ISBN:3-89937-052-X") "Dermal bone that is part of the ventral region of scapular complex in placoderms (see also anterior ventrolateral plate). In most placoderms with a long ventral armour, the ventral wall is typically composed of two large paired lateral plates (anterior and posterior ventrolaterals).") AnnotationAssertion( "WD") AnnotationAssertion(Annotation( "ISBN:3-89937-052-X") "PVL") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4300028") AnnotationAssertion(rdfs:label "posterior ventrolateral plate") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (dermal neck joint) AnnotationAssertion(Annotation( ) "Dermal articulation between skull and shoulder girdle localized to paired dermal neck-joint between anterior dorsolateral plate (ADL) and paranuchal (PNu) plates in placoderms.") AnnotationAssertion( "WD") AnnotationAssertion( "cervical neck joint") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4300029") AnnotationAssertion(rdfs:comment "TODO: add ADL and PNu classes and relationships") AnnotationAssertion(rdfs:label "dermal neck joint") SubClassOf( ) # Class: (flexor caudalis muscle) AnnotationAssertion( "WD") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4300030") AnnotationAssertion(rdfs:comment "TODO: needs definition.") AnnotationAssertion(rdfs:label "flexor caudalis muscle") SubClassOf( ) # Class: (antorbital cartilage) AnnotationAssertion(Annotation( "ISBN:92-5-104543-7") "Cartilage element on the neurocranium of sawsharks and batoids, separate cartilages attached to the sides of the nasal capsules that support the sides or front of the head. [Compagno, L.J.V. Sharks of the world. An annotated and illustrated catalogue of shark species known to date. Volume 2. Bullhead, mackerel and carpet sharks (Heterodontiformes, Lamniformes and Orectolobiformes). FAO Species Catalogue for Fishery Purposes. No. 1, Vol. 2. Rome, FAO. 2001. 269p. ISBN 92-5-104543-7].") AnnotationAssertion( "WD") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4300034") AnnotationAssertion(rdfs:label "antorbital cartilage") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (supraneural element) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "Endochondral element that is median and located in the dorsal skeletogenous septum between the cranium and the dorsal fin.") AnnotationAssertion( "WD") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4300035") AnnotationAssertion(rdfs:label "supraneural element") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (supraneural cartilage) AnnotationAssertion( "WD") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4300036") AnnotationAssertion(rdfs:label "supraneural cartilage") SubClassOf( ) SubClassOf( ) # Class: (facet) AnnotationAssertion(Annotation( ) "A small smooth area on a bone or other firm structure. A worn spot on a tooth, produced by chewing or grinding.") AnnotationAssertion( "WD") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4300038") AnnotationAssertion(rdfs:label "facet") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (X bone) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "The x bone is a detached neural spine anterior to the neural spine of preural centrum 2.") AnnotationAssertion( "WD") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4300090") AnnotationAssertion(rdfs:comment "In fishes, accessory bones (e.g., X bone) are common in Gadiformes and rare in Zeiformes (Borden et al., 2013).") AnnotationAssertion(rdfs:label "X bone") SubClassOf( ) # Class: (Y bone) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "The y bone is a detached neural spine anterior to the haemal spines of preural centrum 2.") AnnotationAssertion( "WD") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4300091") AnnotationAssertion(rdfs:comment "Comment: In fishes, accessory bones (e.g., Y bone) are common in Gadiformes and rare in Zeiformes (Borden et al., 2013).") AnnotationAssertion(rdfs:label "Y bone") SubClassOf( ) # Class: (mesocoracoid element) AnnotationAssertion( "WD") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4300092") AnnotationAssertion(rdfs:label "mesocoracoid element") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (ectocoracoid bone) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "A paired dermal bone in Gasterosteiformes connected with the coracoid and extending posteriorly. Has also been applied to the element below the scapula and applied to the coracoid in Dipnoi. Dictionary of Ichthyology.") AnnotationAssertion( "WD") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4300104") AnnotationAssertion(rdfs:label "ectocoracoid bone") SubClassOf( ) SubClassOf( ) # Class: (caudal vertebra 1) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "Caudal vertebra that is the anteriormost element of the series.") AnnotationAssertion( "WD") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4300105") AnnotationAssertion(rdfs:label "caudal vertebra 1") SubClassOf( ) # Class: (ventral limb of posttemporal) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "Zone of bone organ that is the ventral extension of the posttemporal.") AnnotationAssertion( "WD") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4300106") AnnotationAssertion(rdfs:label "ventral limb of posttemporal") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lateral ethmoid cartilage) AnnotationAssertion( "WD") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4300110") AnnotationAssertion(rdfs:label "lateral ethmoid cartilage") SubClassOf( ) SubClassOf( ) # Class: (lateral ethmoid element) AnnotationAssertion(Annotation( "ZFIN:curator"^^xsd:string) "Endochondral element that separates the olfactory region from the orbit, extends medially to meet its fellow medially below the frontal bones and is bordered by the mesethmoid anteriorly. It may articulate with the autopalatine and infraorbital 1 laterally. The lateral ethmoid is paired.") AnnotationAssertion( "WD") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4300111") AnnotationAssertion(rdfs:label "lateral ethmoid element") SubClassOf( ) # Class: (glenoid region) AnnotationAssertion(Annotation( "PHENOSCAPE:AD") "Region surrounding the glenoid fossa on the scapulocoracoid.") AnnotationAssertion( "WD") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4300119") AnnotationAssertion(rdfs:label "glenoid region") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (zygantrum) AnnotationAssertion(Annotation( "PHENOSCAPE:JL") "A fossa on the posterior median part of the neural arch of a vertebra (as of a snake) that accommodates the zygosphene of the next vertebra.") AnnotationAssertion( "WD") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4300121") AnnotationAssertion(rdfs:label "zygantrum") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pre-axial region) AnnotationAssertion(Annotation( "PHENOSCAPE:AD") "Anatomical region lying to the anterior or dorsal side of the metapterygial axis.") AnnotationAssertion( "WD") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4300123") AnnotationAssertion(rdfs:label "pre-axial region") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (axis intercentrum) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "The intercentrum unit of the axis vertebra. .") AnnotationAssertion( "WD") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4300124") AnnotationAssertion(rdfs:label "axis intercentrum") SubClassOf( ) # Class: (dorsal iliac ridge) AnnotationAssertion(Annotation( "PHENOSCAPE:AD") Annotation( "WD") "Ridge that is part of the ilium.") AnnotationAssertion( "WD") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4300125") AnnotationAssertion(rdfs:label "dorsal iliac ridge") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (tectorial restraint system) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "Tectorial restraint system is a type of ciliary restraint system for hair cells in the inner ear. In tectorial restraint systems, the tectorial membrane restrains the cilia of the hair cells by attaching either directly to ciliary tufts or indirectly through various kinds of fibrous structure (simple fibers, fibrous strands, finger-like processes, tectorial plates) [Phylogenetic Relationships of the Lizard Families: Essays Commemorating Charles L. Camp. 1988. Eds. R Estes, GK Pregill. Stanford University Press].") AnnotationAssertion( "WD") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4300126") AnnotationAssertion(rdfs:label "tectorial restraint system") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (nuchal crest) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "Bony protuberance on the external surface of the occipital bone.[PHENOSCAPE:AD].") AnnotationAssertion( "WD") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4300127") AnnotationAssertion(rdfs:label "nuchal crest") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (dorsal pelvic gland) AnnotationAssertion(Annotation( ) "Cloacal glands that secrete into the dorsal roof of the cloacal tube and or the anterior cloacal chamber. Found in male salamanders.") AnnotationAssertion( "WD") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4300129") AnnotationAssertion(rdfs:label "dorsal pelvic gland") SubClassOf( ) # Class: (lateral pelvic gland) AnnotationAssertion( "WD") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4300130") AnnotationAssertion(Annotation( ) rdfs:comment "Cloacal gland present in males that secrete into the dorsolateral walls of the cloaca (between dorsal pelvic gland and anterior ventral pelvic gland clusters). Found in salamanders.") AnnotationAssertion(rdfs:label "lateral pelvic gland") SubClassOf( ) # Class: (glossopharyngeal nerve foramen) AnnotationAssertion(Annotation( "PHENOSCAPE:WD") "Foramen for the passage of the glossopharyngeal nerve IX.") AnnotationAssertion( "WD") AnnotationAssertion( "nerve foramen IX") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4300132") AnnotationAssertion(rdfs:label "glossopharyngeal nerve foramen") SubClassOf( ) # Class: (upper jaw symphyseal region) AnnotationAssertion(Annotation( "PHENOSCAPE:WD") "The region of the upper jaw on or near the midline.") AnnotationAssertion( "WD") AnnotationAssertion( "upper jaw symphysial region") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4300133") AnnotationAssertion(rdfs:label "upper jaw symphyseal region") SubClassOf( ) # Class: (lateral commissure) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "Region of the braincase which bears the facets for the hyomandibula in fishes. This region disappears in the origin of tetrapods and the space it occipied comes to contribute to the fenestra vestibulii. Clack, JA, 2001. Ch. 23, The otoccipital region. In Major Events in Early Vertebrate Evolution. Per Ahlberg editor.") AnnotationAssertion( "WD") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4300134") AnnotationAssertion(rdfs:label "lateral commissure") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (upper jaw symphyseal tooth) AnnotationAssertion(Annotation( "PHENOSCAPE:WD") "Tooth of the upper jaw that is adjacent to the upper jaw symphysis.") AnnotationAssertion( "WD") AnnotationAssertion( "upper jaw symphysial tooth") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4300135") AnnotationAssertion(rdfs:label "upper jaw symphyseal tooth") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lingual region) AnnotationAssertion(Annotation( "PHENOSCAPE:WD") "The region of an anatomical structure (such as a tooth or jaw bone) facing the tongue.") AnnotationAssertion( "WD") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4300137") AnnotationAssertion(rdfs:label "lingual region") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (labial region) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "The region of an anatomical structure, such as a tooth or jaw bone, facing the lips.[PHENOSCAPE:WD].") AnnotationAssertion( "WD") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4300138") AnnotationAssertion(rdfs:label "labial region") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (posterolingual region) AnnotationAssertion(Annotation( "PHENOSCAPE:WD") "The region of an anatomical structure, such as a tooth or jaw bone, oriented posteriorly and facing the lips.") AnnotationAssertion( "WD") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4300139") AnnotationAssertion(rdfs:label "posterolingual region") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (mesial region) AnnotationAssertion(Annotation( "PHENOSCAPE:WD") "The region of an anatomical structure, such as a tooth or jaw bone, facing the midline of the jaw.") AnnotationAssertion( "WD") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4300140") AnnotationAssertion(rdfs:label "mesial region") SubClassOf( ) # Class: (internal carotid foramen) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "Foramen for the passage of the internal carotid artery.") AnnotationAssertion( "WD") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4300142") AnnotationAssertion(rdfs:label "internal carotid foramen") SubClassOf( ) # Class: (profundus foramen) AnnotationAssertion(Annotation( "PHENOSCAPE:AD") "Foramen for the profundus or ophthalmic nerve.") AnnotationAssertion( "WD") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4300144") AnnotationAssertion(rdfs:label "profundus foramen") SubClassOf( ) # Class: (gill membrane) AnnotationAssertion(Annotation( "PHENOSCAPE:WD") "Membrane organ that is usually supported by branchiostegal rays and forms the ventral and posterior wall of the gill cavity.") AnnotationAssertion( "WD") AnnotationAssertion( "uberon") AnnotationAssertion( "branchiostegal membrane") AnnotationAssertion( "UBERON:4300150") AnnotationAssertion(rdfs:label "gill membrane") SubClassOf( ) # Class: (pelvic intercleithral cartilage) AnnotationAssertion(Annotation( ) "Cartilage element that lies between processes of the cleithrum and pelvic girdle in gobioid fishes. Posterodorsal to the ventral end of each cleithrum is a posteriorly projecting process. The pelvic intercleithral cartilage (an unpaired, median structure) forms a bridge between the processes (From Springer, 1983).") AnnotationAssertion( "WD") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4300151") AnnotationAssertion(rdfs:label "pelvic intercleithral cartilage") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (accessory nasal sac) AnnotationAssertion(Annotation( ) "Accessory nasal sacs are found in a variety of teleosts (Webb, 1993) and likely assist in ventilating the olfactory epithelium by transmitting pressure fluctuations associated with gill irrigation from theoral cavity to the nasal (or sensory) sac (Jakubowski,1975; Webb, 1993; Belanger et al., 2003). [def from Eastman, J. T. and Lannoo, M. J. (2004)].") AnnotationAssertion( "WD") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4300152") AnnotationAssertion(rdfs:label "accessory nasal sac") SubClassOf( ) # Class: (Sharpey's fiber) AnnotationAssertion(Annotation( ) "Sharpey's fibres (bone fibres, or perforating fibres) are a matrix of connective tissue consisting of bundles of strong collagenous fibres connecting periosteum to bone. They are part of the outer fibrous layer of periosteum, entering into the outer circumferential and interstitial lamellae of bone tissue.") AnnotationAssertion( "WD") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4300153") AnnotationAssertion(rdfs:label "Sharpey's fiber") SubClassOf( ) # Class: (anterodorsal crest) AnnotationAssertion( "WD") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4300156") AnnotationAssertion(rdfs:label "anterodorsal crest") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (midshaft) AnnotationAssertion(Annotation( "PHENOSCAPE:NI") "Region in the middle of the shaft of a long bone (e.g. humerus, femur etc).") AnnotationAssertion( "WD") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4300157") AnnotationAssertion(rdfs:label "midshaft") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (ectepicondylar depression) AnnotationAssertion( "WD") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4300158") AnnotationAssertion(rdfs:label "ectepicondylar depression") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete larval pelvic fin) AnnotationAssertion( "WD") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4300159") AnnotationAssertion(rdfs:label "obsolete larval pelvic fin") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (obsolete larval pectoral fin) AnnotationAssertion( "WD") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4300160") AnnotationAssertion(rdfs:label "obsolete larval pectoral fin") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (replacement tooth row) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "Tooth row consisting of replacement teeth.") AnnotationAssertion( "http://orcid.org/0000-0003-3162-7490") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4300177") AnnotationAssertion(rdfs:label "replacement tooth row") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (inner tooth row of dentary) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "Dentary tooth row that is lingual in position relative to other tooth rows.") AnnotationAssertion( "http://orcid.org/0000-0003-3162-7490") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4300178") AnnotationAssertion(rdfs:label "inner tooth row of dentary") SubClassOf( ) # Class: (inner tooth row of premaxilla) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "Tooth row on the premaxilla that is lingually located relative to other tooth rows.") AnnotationAssertion( "http://orcid.org/0000-0003-3162-7490") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4300179") AnnotationAssertion(rdfs:label "inner tooth row of premaxilla") SubClassOf( ) # Class: (isthmus) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) Annotation(rdfs:comment "http://www.fishbase.org/glossary/Glossary.php?q=isthmus") "The fleshy throat region of a fish which extends forward from the ventral part of the chest and narrows anteriorly, and externally separating the two gill chambers; that narrowed portion of the breast which lies between the gill chambers and separates them.") AnnotationAssertion( "http://orcid.org/0000-0003-3162-7490") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4300180") AnnotationAssertion(rdfs:label "isthmus") SubClassOf( ) # Class: (neural spine 5) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "Neural spine that is associated with the fifth vertebra.") AnnotationAssertion( "WD") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4300184") AnnotationAssertion(rdfs:label "neural spine 5") SubClassOf( ) # Class: (neural spine 6) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "Neural spine that is associated with the sixth vertebra.") AnnotationAssertion( "WD") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4300185") AnnotationAssertion(rdfs:label "neural spine 6") SubClassOf( ) # Class: (neural spine 7) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "Neural spine that is associated with the seventh vertebra.") AnnotationAssertion( "WD") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4300186") AnnotationAssertion(rdfs:label "neural spine 7") SubClassOf( ) # Class: (obsolete buccopharyngeal complex) AnnotationAssertion( "UBERON:0000167") AnnotationAssertion( "WD") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4300187") AnnotationAssertion(rdfs:label "obsolete buccopharyngeal complex") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (parapophysis 3) AnnotationAssertion(Annotation( "PHENOSCAPE:WD") "Parapophysis that is the lateral projection from the third centrum. Parapophysis 3 is bilaterally paired.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4300189") AnnotationAssertion(rdfs:label "parapophysis 3") SubClassOf( ) # Class: (photophore) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) Annotation(rdfs:comment "https://en.wikipedia.org/wiki/Photophore") "A light-emitting organ which appears as luminous spots on various marine animals, including fish and cephalopods.") AnnotationAssertion( "WD") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4300194") AnnotationAssertion(rdfs:label "photophore") SubClassOf( ) # Class: (rostral tubule) AnnotationAssertion(Annotation( "PHENOSCAPE:AD") "Consists of a set of tubuli occupying the space between the external dermal bones above the dorsal and anterior wal of the nasal capsule below. Thomson and Campbell (1971).") AnnotationAssertion(Annotation( ) "rostral tubuli") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4300195") AnnotationAssertion(rdfs:label "rostral tubule") SubClassOf( ) # Class: (processus descendens of sphenoid) AnnotationAssertion( "otico-sphenoid bridge") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4300196") AnnotationAssertion(rdfs:label "processus descendens of sphenoid") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (Westoll line) AnnotationAssertion(Annotation( ) "More or less concentric lines of discontinuity in the cosmine of Dipnoi, probably due to cyclic resorption and redeposition during growth occurring on the bases of individual scales and also as large structures between headshield plates.[Fishbase].") AnnotationAssertion(Annotation( ) "Westoll lines") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4300197") AnnotationAssertion(rdfs:label "Westoll line") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (postsplenial) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "Dermal bone of the lower jaw.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4300199") AnnotationAssertion(rdfs:label "postsplenial") SubClassOf( ) SubClassOf( ) # Class: (postparietal shield) AnnotationAssertion(Annotation( "ISBN:978-0-412-78480-4") "Dermal bones (postparietals, supratemporals, intertemporals, extrascapulars) posterior to the intracranial joint. Forey 1997.") AnnotationAssertion( "parietal shield") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4300200") AnnotationAssertion(rdfs:label "postparietal shield") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (subepiotic fossa) AnnotationAssertion(Annotation( "ISBN:978-0-12-670950-6") "Fossa for epaxial musculature inserting on the braincase. Forey et al. 1996.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4300201") AnnotationAssertion(rdfs:label "subepiotic fossa") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (endoskeletal cranial joint) AnnotationAssertion(Annotation( "ISBN:978-0-412-78480-4") "The braincase of most plesiomorphic sarcopterygians is divided by the intracranial point into ethmosphenoid and otic-occipital portions each covered by dermal bones. The function of the joint is presumably to increase the gape of the mouth rapidly during opening phases. (Forey 1997).") AnnotationAssertion( "WD") AnnotationAssertion( "endoskeletal intracranial joint") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4300202") AnnotationAssertion(rdfs:label "endoskeletal cranial joint") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (tectum orbitale) AnnotationAssertion(Annotation( "ISBN:9780226315706") "The dorsal portion of the endocranium that covers the orbital region. Hanken and Hall (1993).") AnnotationAssertion( "WD") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4300203") AnnotationAssertion(rdfs:label "tectum orbitale") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete accessory nasal sac) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "Structures that communicate with the main olfactory chamber and may be located posterior, ventral, or dorsal to it [De Pinna, 1996].") AnnotationAssertion( "UBERON:4300152") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4300204") AnnotationAssertion(rdfs:comment "Duplicate term.") AnnotationAssertion(rdfs:label "obsolete accessory nasal sac") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (palato-maxillary ligament) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "Ligament between the palatine and maxilla [Stiassny 1986].") AnnotationAssertion( "WD") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4300205") AnnotationAssertion(rdfs:label "palato-maxillary ligament") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (mandibulo-lacrimal ligament) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "Ligament that connects the ventromedial end of the lacrimal to the anguloarticular (or 'mandible'). Parenti (2008).") AnnotationAssertion( "WD") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4300206") AnnotationAssertion(rdfs:label "mandibulo-lacrimal ligament") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (submandibular bone) AnnotationAssertion( "WD") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4300207") AnnotationAssertion(rdfs:comment "See Gardiner (1984) for discussion of possible homology with branchiostegal rays. Gardiner, B. G. (1984). The Relationships of the palaeoniscid fishes: a review based on new specimens of Mimia and Moythomasia from the Upper Devonian of Western Australia. Bulletin of the British Museum of Natural History (Geology), 37(4), 173-428.") AnnotationAssertion(rdfs:label "submandibular bone") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (submandibular series) AnnotationAssertion(Annotation( "PHENOSCAPE:AD") "A series of plate like bones found ventrally to the jaw.") AnnotationAssertion( "WD") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4300208") AnnotationAssertion(rdfs:label "submandibular series") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (palato-vomerine ligament) AnnotationAssertion( "WD") AnnotationAssertion( "palatovomerine ligament") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4300209") AnnotationAssertion(rdfs:label "palato-vomerine ligament") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (transversus epibranchialis 2) AnnotationAssertion(Annotation( ) "Dorsal gill-arch muscle connecting right and left epibranchial 2s. Springer and Johnson (2015).") AnnotationAssertion( "WD") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4300210") AnnotationAssertion(rdfs:label "transversus epibranchialis 2") SubClassOf( ) # Class: (lateral plate) AnnotationAssertion(Annotation( ) "Body plates on the lateral sides of the body that occur as single bilateral rows and their number is highly heritable. Bell and Richkind (1981).") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4300211") AnnotationAssertion(rdfs:label "lateral plate") SubClassOf( ) # Class: (acrodin) AnnotationAssertion(Annotation( ) "Odontoid tissue forming a cap on teeth found in teeth of actinopterygian fishes.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4300212") AnnotationAssertion(rdfs:label "acrodin") SubClassOf( ) # Class: (supraneural 1 element) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "Postcranial axial skeletal element located dorsal to vertebra 1.") AnnotationAssertion( "WD") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4300213") AnnotationAssertion(rdfs:label "supraneural 1 element") SubClassOf( ) # Class: (supraneural 2 element) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "Postcranial axial skeletal element located dorsal to vertebra 2.") AnnotationAssertion( "WD") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4300214") AnnotationAssertion(rdfs:label "supraneural 2 element") SubClassOf( ) # Class: (supraneural 3 element) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "Postcranial axial skeletal element located dorsal to vertebrae 3 and 4.") AnnotationAssertion( "WD") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4300215") AnnotationAssertion(rdfs:label "supraneural 3 element") SubClassOf( ) # Class: (supraneural 4 element) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "Supraneural element dorsal to neural spine 4.") AnnotationAssertion( "WD") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4300216") AnnotationAssertion(rdfs:label "supraneural 4 element") SubClassOf( ) # Class: (supraneural 5 element) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "Supraneural element dorsal to neural spine 5.") AnnotationAssertion( "WD") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4300217") AnnotationAssertion(rdfs:label "supraneural 5 element") SubClassOf( ) # Class: (supraneural 6 element) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "Supraneural element dorsal to neural spine 6.") AnnotationAssertion( "WD") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4300218") AnnotationAssertion(rdfs:label "supraneural 6 element") SubClassOf( ) # Class: (supraneural 7 element) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "Supraneural element dorsal to neural spine 7.") AnnotationAssertion( "WD") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4300219") AnnotationAssertion(rdfs:label "supraneural 7 element") SubClassOf( ) # Class: (supraneural 8 element) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "Supraneural element dorsal to neural spine 8.") AnnotationAssertion( "WD") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4300220") AnnotationAssertion(rdfs:label "supraneural 8 element") SubClassOf( ) # Class: (supraneural 9 element) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "Supraneural element dorsal to neural spine 9.") AnnotationAssertion( "WD") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4300221") AnnotationAssertion(rdfs:label "supraneural 9 element") SubClassOf( ) # Class: (precaudal vertebra) AnnotationAssertion(Annotation( ) "Vertebral bone lacking hemal spines (Weitzman, 1962), refers generally to the anterior vertebral region bounding the abdominal cavity. Alternate but not quite synonymous terms are abdominal or trunk vertebrae, which bear parapophyses and ribs. In many actinopterygians dorsal to the posterior abdominal cavity there are transitional vertebrae lacking ribs but also without hemal spines or sometimes even enclosed hemal arches. The primary definition would identify these vertebrae as precaudal. Bird and Mabee, 2003.") AnnotationAssertion( "WD") AnnotationAssertion( "TAO:0000263") AnnotationAssertion( "ZFA:0000263") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4300223") AnnotationAssertion(rdfs:label "precaudal vertebra") SubClassOf( ) SubClassOf( ) # Class: (precaudal vertebra endochondral element) AnnotationAssertion(Annotation( ) "Vertebral elements lacking hemal spines (Weitzman, 1962), refers generally to the anterior vertebral region bounding the abdominal cavity. Alternate but not quite synonymous terms are abdominal or trunk vertebrae, which bear parapophyses and ribs. In many actinopterygians dorsal to the posterior abdominal cavity there are transitional vertebrae lacking ribs but also without hemal spines or sometimes even enclosed hemal arches. The primary definition would identify these vertebrae as precaudal.(Bird and Mabee, 2003).") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4300224") AnnotationAssertion(rdfs:label "precaudal vertebra endochondral element") SubClassOf( ) # Class: (precaudal vertebra cartilage element) AnnotationAssertion(Annotation( ) "Vertebral cartilage elements lacking hemal spines (Weitzman, 1962), refers generally to the anterior vertebral region bounding the abdominal cavity. Alternate but not quite synonymous terms are abdominal or trunk vertebrae, which bear parapophyses and ribs. In many actinopterygians dorsal to the posterior abdominal cavity there are transitional vertebrae lacking ribs but also without hemal spines or sometimes even enclosed hemal arches. The primary definition would identify these vertebrae as precaudal.(Bird and Mabee, 2003).") AnnotationAssertion( "WD") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4300225") AnnotationAssertion(rdfs:label "precaudal vertebra cartilage element") SubClassOf( ) SubClassOf( ) # Class: (forelimb bud mesenchyme) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "Mesenchyme that is part of a forelimb bud.") AnnotationAssertion( "WD") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4300226") AnnotationAssertion(rdfs:label "forelimb bud mesenchyme") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (hindlimb bud mesenchyme) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "Mesenchyme that is part of a hindlimb bud.") AnnotationAssertion( "WD") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4300227") AnnotationAssertion(rdfs:label "hindlimb bud mesenchyme") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (mammiliform tooth) AnnotationAssertion(Annotation( ) "Calcareous tooth with a hyptertrophied base.") AnnotationAssertion( "WD") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4300233") AnnotationAssertion(rdfs:label "mammiliform tooth") SubClassOf( ) # Class: (rib of vertebra 7) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "Rib that articulates with the parapophysis of the seventh centrum.") AnnotationAssertion( "WD") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4300236") AnnotationAssertion(rdfs:label "rib of vertebra 7") SubClassOf( ) # Class: (rib of vertebra 8) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "Rib that articulates with the parapophysis of the eighth centrum.") AnnotationAssertion( "WD") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4300237") AnnotationAssertion(rdfs:label "rib of vertebra 8") SubClassOf( ) # Class: (hind flipper) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "Hindlimb that is used to propel an animal through water.") AnnotationAssertion( "WD") AnnotationAssertion( "hindflipper") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4300239") AnnotationAssertion(rdfs:label "hind flipper") SubClassOf( ) # Class: (rostral ossicle) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "Ossicle that surrounds the sensory canals of the snout when passing from the ethmoidal commissure to the infraorbital series and have first been noticed by Nybelin [14] in Elops. From: Filleul and Lavoué. (2001). Basal teleosts and the question of elopomorph monophyly. Morphological and molecular approaches. Comptes rendus de l'Académie des sciences. Série III, Sciences de la vie. 324. 393-9. 10.1016/S0764-4469(00)01302-0.") AnnotationAssertion( "WD") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4300240") AnnotationAssertion(rdfs:label "rostral ossicle") SubClassOf( ) # Class: (premaxillary tooth 2) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "Premaxillary tooth that is the second tooth in a premaxillary tooth series, and positioned adjacent to the symphyseal tooth.") AnnotationAssertion( "WD") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4300243") AnnotationAssertion(rdfs:label "premaxillary tooth 2") SubClassOf( ) # Class: (premaxillary tooth 3) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "Premaxillary tooth that is the third tooth in a premaxillary tooth series, and positioned adjacent to the second tooth.") AnnotationAssertion( "WD") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4300244") AnnotationAssertion(rdfs:label "premaxillary tooth 3") SubClassOf( ) # Class: (dentary tooth 2) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "Dentary tooth that is the second tooth in a dentary tooth series, and positioned adjacent to the symphyseal tooth.") AnnotationAssertion( "WD") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4300246") AnnotationAssertion(rdfs:label "dentary tooth 2") SubClassOf( ) # Class: (dentary tooth 3) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "Dentary tooth that is the third tooth in a dentary tooth series, and positioned adjacent to the symphyseal tooth.") AnnotationAssertion( "WD") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4300247") AnnotationAssertion(rdfs:label "dentary tooth 3") SubClassOf( ) # Class: (lateral occipital foramen) AnnotationAssertion(Annotation( "ZFIN:ZDB-PUB-961014-192") "Foramen that has the exoccipital as the anterior and dorsal rim. The occipital forms the anterior rim during early development. [database_cross_reference: GOC:cvs][database_cross_reference: https://orcid.org/0000-0002-2244-7917][database_cross_reference: ZFIN:ZDB-PUB-961014-192].") AnnotationAssertion( "ZFA:0005892") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4300249") AnnotationAssertion(rdfs:label "lateral occipital foramen") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (ethmo-palatine cartilage) AnnotationAssertion(Annotation( ) "The ethmo-palatine cartilage (EPC) is a distinct body situated between the posterior surface of the upper arm of the premaxilla and the anterior margin of the palatine. There is usually only a single cartilage mass lying between these bones, although that cartilage is apparently subdivided into two units in some taxa (e.g., the Old World characiform family Citharinidae, Vari, 1979:294). Vari 1989a.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4300252") AnnotationAssertion(rdfs:label "ethmo-palatine cartilage") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (supraneural 4 cartilage) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4300263") AnnotationAssertion(rdfs:label "supraneural 4 cartilage") SubClassOf( ) SubClassOf( ) # Class: (supraneural 5 cartilage) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4300264") AnnotationAssertion(rdfs:label "supraneural 5 cartilage") SubClassOf( ) SubClassOf( ) # Class: (supraneural 6 cartilage) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4300265") AnnotationAssertion(rdfs:label "supraneural 6 cartilage") SubClassOf( ) SubClassOf( ) # Class: (supraneural 7 cartilage) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4300266") AnnotationAssertion(rdfs:label "supraneural 7 cartilage") SubClassOf( ) SubClassOf( ) # Class: (supraneural 8 cartilage) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4300267") AnnotationAssertion(rdfs:label "supraneural 8 cartilage") SubClassOf( ) SubClassOf( ) # Class: (supraneural 9 cartilage) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4300268") AnnotationAssertion(rdfs:label "supraneural 9 cartilage") SubClassOf( ) SubClassOf( ) # Class: (epioccipital bridge) AnnotationAssertion(Annotation( ) "Extension of the exoccipital that extends over the posttemporal fossa.") AnnotationAssertion( "http://orcid.org/0000-0003-3162-7490") AnnotationAssertion( "epiotic bridge") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4300269") AnnotationAssertion(rdfs:label "epioccipital bridge") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (outer tooth row of premaxilla) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "Tooth row on the premaxilla that is labially located relative to other tooth rows.") AnnotationAssertion( "http://orcid.org/0000-0003-3162-7490") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4300270") AnnotationAssertion(rdfs:label "outer tooth row of premaxilla") SubClassOf( ) # Class: (suborbital stay) AnnotationAssertion(Annotation( ) "A backwards extension of the third circumorbital bone (part of the lateral head/cheek skeleton, below the eye socket) across the cheek to the preoperculum, to which it is connected in most species [wikipedia].") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4300275") AnnotationAssertion(rdfs:label "suborbital stay") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (outer tooth row of dentary) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "Dentary tooth row that is labial in position relative to other tooth rows.") AnnotationAssertion( "http://orcid.org/0000-0003-3162-7490") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4300279") AnnotationAssertion(rdfs:label "outer tooth row of dentary") SubClassOf( ) # Class: (metapterygoid tooth) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "Tooth that is attached to the metapterygoid.") AnnotationAssertion( "http://orcid.org/0000-0003-3162-7490") AnnotationAssertion( "uberon") AnnotationAssertion( "metapterygoid teeth") AnnotationAssertion( "UBERON:4300280") AnnotationAssertion(rdfs:label "metapterygoid tooth") SubClassOf( ) # Class: (dorsal myorhabdoid bone) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) Annotation(rdfs:comment "https://doi.org/10.1111/cla.12345") "Myorhabdoid bones located dorsal to the epineurals.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4300282") AnnotationAssertion(rdfs:label "dorsal myorhabdoid bone") SubClassOf( ) # Class: (ventral myorhabdoid bone) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) Annotation(rdfs:comment "https://doi.org/10.1111/cla.12345") "Myorhabdoid bones located ventral to the epipleurals.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4300283") AnnotationAssertion(rdfs:label "ventral myorhabdoid bone") SubClassOf( ) # Class: (second preethmoid cartilage) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "Cartilage element found between the preethmoid and maxilla.") AnnotationAssertion( "http://orcid.org/0000-0003-3162-7490") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4300285") AnnotationAssertion(rdfs:label "second preethmoid cartilage") SubClassOf( ) SubClassOf( ) # Class: (second preethmoid element) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "Endochondral skeletal element found between the preethmoid and maxilla.") AnnotationAssertion( "http://orcid.org/0000-0003-3162-7490") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4300286") AnnotationAssertion(rdfs:label "second preethmoid element") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (nasal barbel) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "Barbel that is associated with a nostril. Nasal barbels are paired.") AnnotationAssertion( "http://orcid.org/0000-0003-3162-7490") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4300287") AnnotationAssertion(rdfs:label "nasal barbel") SubClassOf( ) # Class: (rictal barbel) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "Barbel located from the fleshy corner of the mouth.") AnnotationAssertion( "http://orcid.org/0000-0003-3162-7490") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4300288") AnnotationAssertion(rdfs:comment "Definition needs review. Rictal barbels are described for trichomycterids and other catfishes.") AnnotationAssertion(rdfs:label "rictal barbel") SubClassOf( ) # Class: (obsolete paired fin radial) AnnotationAssertion( "UBERON:1500006") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4400009") AnnotationAssertion(rdfs:comment "Was already defined") AnnotationAssertion(rdfs:label "obsolete paired fin radial") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (prenasal ossicle) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "Tubular ossifications around extension of nasal lateral line canal in fishes; typically one or two.") AnnotationAssertion( "One or two tubular ossifications (prenasals) around extension of nasal canal in Carangiformes (Freihofer 1978, Smith-Vaniz 1984, Johnson 1984; found elsewhere only in Toxotidae of Perciformes) and some Elopomorpha from Wiley and Johnson, 2010. Wiley, E.O. & Johnson, G.D. 2010. A teleost classification based on monophyletic groups. In J.S. Nelson, H.-P. Schultze & M.V.H. Wilson (eds.), Origin and Phylogenetic Interrelationships of Teleosts. Verlag Dr. Friedrich Pfeil, München, Germany: 123-182.") AnnotationAssertion( "LMJ") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4500005") AnnotationAssertion(rdfs:label "prenasal ossicle") SubClassOf( ) SubClassOf( ) # Class: (hypobranchial series) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "Anatomical cluster that consists of the hypobranchial elements within an individual.") AnnotationAssertion( "LMJ") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4500012") AnnotationAssertion(rdfs:label "hypobranchial series") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pharyngobranchial series) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "Anatomical cluster that consists of the pharyngobranchial elements within an individual.") AnnotationAssertion( "LMJ") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4500013") AnnotationAssertion(rdfs:label "pharyngobranchial series") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (basibranchial series) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "Anatomical cluster that consists of the basibranchial elements within an individual.") AnnotationAssertion( "LMJ") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4500014") AnnotationAssertion(rdfs:label "basibranchial series") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (premaxilla articular process) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "Pharyngeal arch bone immediately posterior to the ascending process, the medial surface of which articulates with the anterior end of the maxillary.") AnnotationAssertion( "LMJ") AnnotationAssertion( "articular process of the premaxilla") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4500016") AnnotationAssertion(rdfs:comment "The change from a premaxilla in which the ascending and articular processes are separate to one in which they are firmly united has occurred many times in higher teleosts. - Gosline, 1987 (Jaw Structures and Movements in Higher Teleostean Fishes)") AnnotationAssertion(rdfs:label "premaxilla articular process") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (interarcual bone) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "Pharyngeal arch bone located between uncinate process of epibranchial 1 and pharyngobranchial 2.") AnnotationAssertion( "LMJ") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4500017") AnnotationAssertion(rdfs:label "interarcual bone") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (premaxilla maxillary process) AnnotationAssertion(Annotation( "PHENOSCAPE"^^xsd:string) "Process of the premaxilla that extends upward, and often lies against the medial surface of the maxillary.") AnnotationAssertion( "LMJ") AnnotationAssertion( "postmaxillary process") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:4500018") AnnotationAssertion(rdfs:label "premaxilla maxillary process") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (manual digit 1 plus metapodial segment) AnnotationAssertion(Annotation( ) "A subdivision of the autopod consisting of manual digit 1 plus the region incorporating a single metapodial element. These segments are typically repeated along the pre-axiom to post-axial axis.") AnnotationAssertion(Annotation( ) "this class represents a series of phalanges plus a metapodial element plus associated soft tissues. Instances of this class typically do not form a distinct unit.") AnnotationAssertion(Annotation( ) "manual digit 1") AnnotationAssertion(Annotation( ) Annotation( ) "manual digit 1 ( phalanges plus metapodial) plus soft tissue") AnnotationAssertion(Annotation( ) "manual digit 1 digitopodial subdivision") AnnotationAssertion(Annotation( ) "manual digit 1 ray") AnnotationAssertion(Annotation( ) Annotation( ) "manual digit I plus metapodial segment") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:5001463") AnnotationAssertion(rdfs:label "manual digit 1 plus metapodial segment") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pedal digit plus metapodial segment) AnnotationAssertion(Annotation( ) "A subdivision of the autopod consisting of pedal digit plus the region incorporating a single metapodial element. These segments are typically repeated along the pre-axiom to post-axial axis.") AnnotationAssertion(Annotation( ) "this class represents a series of phalanges plus a metapodial element plus associated soft tissues. Instances of this class typically do not form a distinct unit.") AnnotationAssertion(Annotation( ) "pedal digit") AnnotationAssertion(Annotation( ) Annotation( ) "pedal digit ( phalanges plus metapodial) plus soft tissue") AnnotationAssertion(Annotation( ) "pedal digit digitopodial subdivision") AnnotationAssertion(Annotation( ) "pedal digit ray") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:5001466") AnnotationAssertion(rdfs:label "pedal digit plus metapodial segment") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (manual digit plus metapodial segment) AnnotationAssertion(Annotation( ) "A subdivision of the autopod consisting of manual digit plus the region incorporating a single metapodial element. These segments are typically repeated along the pre-axiom to post-axial axis.") AnnotationAssertion(Annotation( ) "this class represents a series of phalanges plus a metapodial element plus associated soft tissues. Instances of this class typically do not form a distinct unit.") AnnotationAssertion(Annotation( ) "manual digit") AnnotationAssertion(Annotation( ) Annotation( ) "manual digit ( phalanges plus metapodial) plus soft tissue") AnnotationAssertion(Annotation( ) "manual digit digitopodial subdivision") AnnotationAssertion(Annotation( ) "manual digit ray") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:5002389") AnnotationAssertion(rdfs:label "manual digit plus metapodial segment") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (digit plus metapodial segment) AnnotationAssertion(Annotation( ) "A subdivision of the autopod consisting of digit plus the region incorporating a single metapodial element. These segments are typically repeated along the pre-axiom to post-axial axis.") AnnotationAssertion(Annotation( ) "this class represents a series of phalanges plus a metapodial element plus associated soft tissues. Instances of this class typically do not form a distinct unit.") AnnotationAssertion(Annotation( ) "digit") AnnotationAssertion(Annotation( ) Annotation( ) "digit ( phalanges plus metapodial) plus soft tissue") AnnotationAssertion(Annotation( ) "digit digitopodial subdivision") AnnotationAssertion(Annotation( ) "digit ray") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:5002544") AnnotationAssertion(rdfs:label "digit plus metapodial segment") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (manual digit 2 plus metapodial segment) AnnotationAssertion(Annotation( ) "A subdivision of the autopod consisting of manual digit 2 plus the region incorporating a single metapodial element. These segments are typically repeated along the pre-axiom to post-axial axis.") AnnotationAssertion(Annotation( ) "this class represents a series of phalanges plus a metapodial element plus associated soft tissues. Instances of this class typically do not form a distinct unit.") AnnotationAssertion(Annotation( ) "manual digit 2") AnnotationAssertion(Annotation( ) Annotation( ) "manual digit 2 ( phalanges plus metapodial) plus soft tissue") AnnotationAssertion(Annotation( ) "manual digit 2 digitopodial subdivision") AnnotationAssertion(Annotation( ) "manual digit 2 ray") AnnotationAssertion(Annotation( ) Annotation( ) "manual digit II plus metapodial segment") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:5003622") AnnotationAssertion(rdfs:label "manual digit 2 plus metapodial segment") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (manual digit 3 plus metapodial segment) AnnotationAssertion(Annotation( ) "A subdivision of the autopod consisting of manual digit 3 plus the region incorporating a single metapodial element. These segments are typically repeated along the pre-axiom to post-axial axis.") AnnotationAssertion(Annotation( ) "this class represents a series of phalanges plus a metapodial element plus associated soft tissues. Instances of this class typically do not form a distinct unit.") AnnotationAssertion(Annotation( ) "manual digit 3") AnnotationAssertion(Annotation( ) Annotation( ) "manual digit 3 ( phalanges plus metapodial) plus soft tissue") AnnotationAssertion(Annotation( ) "manual digit 3 digitopodial subdivision") AnnotationAssertion(Annotation( ) "manual digit 3 ray") AnnotationAssertion(Annotation( ) Annotation( ) "manual digit III plus metapodial segment") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:5003623") AnnotationAssertion(rdfs:label "manual digit 3 plus metapodial segment") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (manual digit 4 plus metapodial segment) AnnotationAssertion(Annotation( ) "A subdivision of the autopod consisting of manual digit 4 plus the region incorporating a single metapodial element. These segments are typically repeated along the pre-axiom to post-axial axis.") AnnotationAssertion(Annotation( ) "this class represents a series of phalanges plus a metapodial element plus associated soft tissues. Instances of this class typically do not form a distinct unit.") AnnotationAssertion(Annotation( ) "manual digit 4") AnnotationAssertion(Annotation( ) Annotation( ) "manual digit 4 ( phalanges plus metapodial) plus soft tissue") AnnotationAssertion(Annotation( ) "manual digit 4 digitopodial subdivision") AnnotationAssertion(Annotation( ) "manual digit 4 ray") AnnotationAssertion(Annotation( ) Annotation( ) "manual digit IV plus metapodial segment") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:5003624") AnnotationAssertion(rdfs:label "manual digit 4 plus metapodial segment") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (manual digit 5 plus metapodial segment) AnnotationAssertion(Annotation( ) "A subdivision of the autopod consisting of manual digit 5 plus the region incorporating a single metapodial element. These segments are typically repeated along the pre-axiom to post-axial axis.") AnnotationAssertion(Annotation( ) "this class represents a series of phalanges plus a metapodial element plus associated soft tissues. Instances of this class typically do not form a distinct unit.") AnnotationAssertion(Annotation( ) "manual digit 5") AnnotationAssertion(Annotation( ) Annotation( ) "manual digit 5 ( phalanges plus metapodial) plus soft tissue") AnnotationAssertion(Annotation( ) "manual digit 5 digitopodial subdivision") AnnotationAssertion(Annotation( ) "manual digit 5 ray") AnnotationAssertion(Annotation( ) Annotation( ) "manual digit V plus metapodial segment") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:5003625") AnnotationAssertion(rdfs:label "manual digit 5 plus metapodial segment") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pedal digit 1 plus metapodial segment) AnnotationAssertion(Annotation( ) "A subdivision of the autopod consisting of pedal digit 1 plus the region incorporating a single metapodial element. These segments are typically repeated along the pre-axiom to post-axial axis.") AnnotationAssertion(Annotation( ) "this class represents a series of phalanges plus a metapodial element plus associated soft tissues. Instances of this class typically do not form a distinct unit.") AnnotationAssertion(Annotation( ) "pedal digit 1") AnnotationAssertion(Annotation( ) Annotation( ) "pedal digit 1 ( phalanges plus metapodial) plus soft tissue") AnnotationAssertion(Annotation( ) "pedal digit 1 digitopodial subdivision") AnnotationAssertion(Annotation( ) "pedal digit 1 ray") AnnotationAssertion(Annotation( ) Annotation( ) "pedal digit I plus metapodial segment") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:5003631") AnnotationAssertion(rdfs:label "pedal digit 1 plus metapodial segment") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pedal digit 2 plus metapodial segment) AnnotationAssertion(Annotation( ) "A subdivision of the autopod consisting of pedal digit 2 plus the region incorporating a single metapodial element. These segments are typically repeated along the pre-axiom to post-axial axis.") AnnotationAssertion(Annotation( ) "this class represents a series of phalanges plus a metapodial element plus associated soft tissues. Instances of this class typically do not form a distinct unit.") AnnotationAssertion(Annotation( ) "pedal digit 2") AnnotationAssertion(Annotation( ) Annotation( ) "pedal digit 2 ( phalanges plus metapodial) plus soft tissue") AnnotationAssertion(Annotation( ) "pedal digit 2 digitopodial subdivision") AnnotationAssertion(Annotation( ) "pedal digit 2 ray") AnnotationAssertion(Annotation( ) Annotation( ) "pedal digit II plus metapodial segment") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:5003632") AnnotationAssertion(rdfs:label "pedal digit 2 plus metapodial segment") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pedal digit 3 plus metapodial segment) AnnotationAssertion(Annotation( ) "A subdivision of the autopod consisting of pedal digit 3 plus the region incorporating a single metapodial element. These segments are typically repeated along the pre-axiom to post-axial axis.") AnnotationAssertion(Annotation( ) "this class represents a series of phalanges plus a metapodial element plus associated soft tissues. Instances of this class typically do not form a distinct unit.") AnnotationAssertion(Annotation( ) "pedal digit 3") AnnotationAssertion(Annotation( ) Annotation( ) "pedal digit 3 ( phalanges plus metapodial) plus soft tissue") AnnotationAssertion(Annotation( ) "pedal digit 3 digitopodial subdivision") AnnotationAssertion(Annotation( ) "pedal digit 3 ray") AnnotationAssertion(Annotation( ) Annotation( ) "pedal digit III plus metapodial segment") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:5003633") AnnotationAssertion(rdfs:label "pedal digit 3 plus metapodial segment") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pedal digit 4 plus metapodial segment) AnnotationAssertion(Annotation( ) "A subdivision of the autopod consisting of pedal digit 4 plus the region incorporating a single metapodial element. These segments are typically repeated along the pre-axiom to post-axial axis.") AnnotationAssertion(Annotation( ) "this class represents a series of phalanges plus a metapodial element plus associated soft tissues. Instances of this class typically do not form a distinct unit.") AnnotationAssertion(Annotation( ) "pedal digit 4") AnnotationAssertion(Annotation( ) Annotation( ) "pedal digit 4 ( phalanges plus metapodial) plus soft tissue") AnnotationAssertion(Annotation( ) "pedal digit 4 digitopodial subdivision") AnnotationAssertion(Annotation( ) "pedal digit 4 ray") AnnotationAssertion(Annotation( ) Annotation( ) "pedal digit IV plus metapodial segment") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:5003634") AnnotationAssertion(rdfs:label "pedal digit 4 plus metapodial segment") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pedal digit 5 plus metapodial segment) AnnotationAssertion(Annotation( ) "A subdivision of the autopod consisting of pedal digit 5 plus the region incorporating a single metapodial element. These segments are typically repeated along the pre-axiom to post-axial axis.") AnnotationAssertion(Annotation( ) "this class represents a series of phalanges plus a metapodial element plus associated soft tissues. Instances of this class typically do not form a distinct unit.") AnnotationAssertion(Annotation( ) "pedal digit 5") AnnotationAssertion(Annotation( ) Annotation( ) "pedal digit 5 ( phalanges plus metapodial) plus soft tissue") AnnotationAssertion(Annotation( ) "pedal digit 5 digitopodial subdivision") AnnotationAssertion(Annotation( ) "pedal digit 5 ray") AnnotationAssertion(Annotation( ) Annotation( ) "pedal digit V plus metapodial segment") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:5003635") AnnotationAssertion(rdfs:label "pedal digit 5 plus metapodial segment") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (digit 1 plus metapodial segment) AnnotationAssertion(Annotation( ) "A subdivision of the autopod consisting of digit 1 plus the region incorporating a single metapodial element. These segments are typically repeated along the pre-axiom to post-axial axis.") AnnotationAssertion(Annotation( ) "this class represents a series of phalanges plus a metapodial element plus associated soft tissues. Instances of this class typically do not form a distinct unit.") AnnotationAssertion(Annotation( ) "digit 1") AnnotationAssertion(Annotation( ) Annotation( ) "digit 1 ( phalanges plus metapodial) plus soft tissue") AnnotationAssertion(Annotation( ) "digit 1 digitopodial subdivision") AnnotationAssertion(Annotation( ) "digit 1 ray") AnnotationAssertion(Annotation( ) Annotation( ) "digit I plus metapodial segment") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:5006048") AnnotationAssertion(rdfs:label "digit 1 plus metapodial segment") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (digit 2 plus metapodial segment) AnnotationAssertion(Annotation( ) "A subdivision of the autopod consisting of digit 2 plus the region incorporating a single metapodial element. These segments are typically repeated along the pre-axiom to post-axial axis.") AnnotationAssertion(Annotation( ) "this class represents a series of phalanges plus a metapodial element plus associated soft tissues. Instances of this class typically do not form a distinct unit.") AnnotationAssertion(Annotation( ) "digit 2") AnnotationAssertion(Annotation( ) Annotation( ) "digit 2 ( phalanges plus metapodial) plus soft tissue") AnnotationAssertion(Annotation( ) "digit 2 digitopodial subdivision") AnnotationAssertion(Annotation( ) "digit 2 ray") AnnotationAssertion(Annotation( ) Annotation( ) "digit II plus metapodial segment") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:5006049") AnnotationAssertion(rdfs:label "digit 2 plus metapodial segment") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (digit 3 plus metapodial segment) AnnotationAssertion(Annotation( ) "A subdivision of the autopod consisting of digit 3 plus the region incorporating a single metapodial element. These segments are typically repeated along the pre-axiom to post-axial axis.") AnnotationAssertion(Annotation( ) "this class represents a series of phalanges plus a metapodial element plus associated soft tissues. Instances of this class typically do not form a distinct unit.") AnnotationAssertion(Annotation( ) "digit 3") AnnotationAssertion(Annotation( ) Annotation( ) "digit 3 ( phalanges plus metapodial) plus soft tissue") AnnotationAssertion(Annotation( ) "digit 3 digitopodial subdivision") AnnotationAssertion(Annotation( ) "digit 3 ray") AnnotationAssertion(Annotation( ) Annotation( ) "digit III plus metapodial segment") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:5006050") AnnotationAssertion(rdfs:label "digit 3 plus metapodial segment") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (digit 4 plus metapodial segment) AnnotationAssertion(Annotation( ) "A subdivision of the autopod consisting of digit 4 plus the region incorporating a single metapodial element. These segments are typically repeated along the pre-axiom to post-axial axis.") AnnotationAssertion(Annotation( ) "this class represents a series of phalanges plus a metapodial element plus associated soft tissues. Instances of this class typically do not form a distinct unit.") AnnotationAssertion(Annotation( ) "digit 4") AnnotationAssertion(Annotation( ) Annotation( ) "digit 4 ( phalanges plus metapodial) plus soft tissue") AnnotationAssertion(Annotation( ) "digit 4 digitopodial subdivision") AnnotationAssertion(Annotation( ) "digit 4 ray") AnnotationAssertion(Annotation( ) Annotation( ) "digit IV plus metapodial segment") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:5006051") AnnotationAssertion(rdfs:label "digit 4 plus metapodial segment") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (digit 5 plus metapodial segment) AnnotationAssertion(Annotation( ) "A subdivision of the autopod consisting of digit 5 plus the region incorporating a single metapodial element. These segments are typically repeated along the pre-axiom to post-axial axis.") AnnotationAssertion(Annotation( ) "this class represents a series of phalanges plus a metapodial element plus associated soft tissues. Instances of this class typically do not form a distinct unit.") AnnotationAssertion(Annotation( ) "digit 5") AnnotationAssertion(Annotation( ) Annotation( ) "digit 5 ( phalanges plus metapodial) plus soft tissue") AnnotationAssertion(Annotation( ) "digit 5 digitopodial subdivision") AnnotationAssertion(Annotation( ) "digit 5 ray") AnnotationAssertion(Annotation( ) Annotation( ) "digit V plus metapodial segment") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:5006052") AnnotationAssertion(rdfs:label "digit 5 plus metapodial segment") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (manual digit 6 plus metapodial segment) AnnotationAssertion(Annotation( ) "A subdivision of the autopod consisting of manual digit 6 plus the region incorporating a single metapodial element. These segments are typically repeated along the pre-axiom to post-axial axis.") AnnotationAssertion(Annotation( ) "this class represents a series of phalanges plus a metapodial element plus associated soft tissues. Instances of this class typically do not form a distinct unit.") AnnotationAssertion(Annotation( ) "manual digit 6") AnnotationAssertion(Annotation( ) Annotation( ) "manual digit 6 ( phalanges plus metapodial) plus soft tissue") AnnotationAssertion(Annotation( ) "manual digit 6 digitopodial subdivision") AnnotationAssertion(Annotation( ) "manual digit 6 ray") AnnotationAssertion(Annotation( ) Annotation( ) "manual digit VI plus metapodial segment") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:5011981") AnnotationAssertion(rdfs:label "manual digit 6 plus metapodial segment") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (manual digit 7 plus metapodial segment) AnnotationAssertion(Annotation( ) "A subdivision of the autopod consisting of manual digit 7 plus the region incorporating a single metapodial element. These segments are typically repeated along the pre-axiom to post-axial axis.") AnnotationAssertion(Annotation( ) "this class represents a series of phalanges plus a metapodial element plus associated soft tissues. Instances of this class typically do not form a distinct unit.") AnnotationAssertion(Annotation( ) "manual digit 7") AnnotationAssertion(Annotation( ) Annotation( ) "manual digit 7 ( phalanges plus metapodial) plus soft tissue") AnnotationAssertion(Annotation( ) "manual digit 7 digitopodial subdivision") AnnotationAssertion(Annotation( ) "manual digit 7 ray") AnnotationAssertion(Annotation( ) Annotation( ) "manual digit VII plus metapodial segment") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:5011982") AnnotationAssertion(rdfs:label "manual digit 7 plus metapodial segment") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (manual digit 8 plus metapodial segment) AnnotationAssertion(Annotation( ) "A subdivision of the autopod consisting of manual digit 8 plus the region incorporating a single metapodial element. These segments are typically repeated along the pre-axiom to post-axial axis.") AnnotationAssertion(Annotation( ) "this class represents a series of phalanges plus a metapodial element plus associated soft tissues. Instances of this class typically do not form a distinct unit.") AnnotationAssertion(Annotation( ) "manual digit 8") AnnotationAssertion(Annotation( ) Annotation( ) "manual digit 8 ( phalanges plus metapodial) plus soft tissue") AnnotationAssertion(Annotation( ) "manual digit 8 digitopodial subdivision") AnnotationAssertion(Annotation( ) "manual digit 8 ray") AnnotationAssertion(Annotation( ) Annotation( ) "manual digit VIII plus metapodial segment") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:5011983") AnnotationAssertion(rdfs:label "manual digit 8 plus metapodial segment") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pedal digit 6 plus metapodial segment) AnnotationAssertion(Annotation( ) "A subdivision of the autopod consisting of pedal digit 6 plus the region incorporating a single metapodial element. These segments are typically repeated along the pre-axiom to post-axial axis.") AnnotationAssertion(Annotation( ) "this class represents a series of phalanges plus a metapodial element plus associated soft tissues. Instances of this class typically do not form a distinct unit.") AnnotationAssertion(Annotation( ) "pedal digit 6") AnnotationAssertion(Annotation( ) Annotation( ) "pedal digit 6 ( phalanges plus metapodial) plus soft tissue") AnnotationAssertion(Annotation( ) "pedal digit 6 digitopodial subdivision") AnnotationAssertion(Annotation( ) "pedal digit 6 ray") AnnotationAssertion(Annotation( ) Annotation( ) "pedal digit VI plus metapodial segment") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:5011984") AnnotationAssertion(rdfs:label "pedal digit 6 plus metapodial segment") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pedal digit 7 plus metapodial segment) AnnotationAssertion(Annotation( ) "A subdivision of the autopod consisting of pedal digit 7 plus the region incorporating a single metapodial element. These segments are typically repeated along the pre-axiom to post-axial axis.") AnnotationAssertion(Annotation( ) "this class represents a series of phalanges plus a metapodial element plus associated soft tissues. Instances of this class typically do not form a distinct unit.") AnnotationAssertion(Annotation( ) "pedal digit 7") AnnotationAssertion(Annotation( ) Annotation( ) "pedal digit 7 ( phalanges plus metapodial) plus soft tissue") AnnotationAssertion(Annotation( ) "pedal digit 7 digitopodial subdivision") AnnotationAssertion(Annotation( ) "pedal digit 7 ray") AnnotationAssertion(Annotation( ) Annotation( ) "pedal digit VII plus metapodial segment") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:5012137") AnnotationAssertion(rdfs:label "pedal digit 7 plus metapodial segment") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pedal digit 8 plus metapodial segment) AnnotationAssertion(Annotation( ) "A subdivision of the autopod consisting of pedal digit 8 plus the region incorporating a single metapodial element. These segments are typically repeated along the pre-axiom to post-axial axis.") AnnotationAssertion(Annotation( ) "this class represents a series of phalanges plus a metapodial element plus associated soft tissues. Instances of this class typically do not form a distinct unit.") AnnotationAssertion(Annotation( ) "pedal digit 8") AnnotationAssertion(Annotation( ) Annotation( ) "pedal digit 8 ( phalanges plus metapodial) plus soft tissue") AnnotationAssertion(Annotation( ) "pedal digit 8 digitopodial subdivision") AnnotationAssertion(Annotation( ) "pedal digit 8 ray") AnnotationAssertion(Annotation( ) Annotation( ) "pedal digit VIII plus metapodial segment") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:5012138") AnnotationAssertion(rdfs:label "pedal digit 8 plus metapodial segment") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (manual digit 1 digitopodial skeleton) AnnotationAssertion(Annotation( ) "A subdivision of the skeleton of the autopod consisting of the phalanges of manual digit 1 plus the associated metapodial element.") AnnotationAssertion( "this class represents a series of phalanges plus a metapodial element. In comparative anatomy terminology we would call this a 'digit', but the label 'digit' is sometimes used to exclude metapodials and to include soft tissue. This series of elements is hypothesized to be homologous to radials.") AnnotationAssertion(Annotation( ) Annotation( ) "manual digit I digitopodial skeleton") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "manual digit 1") AnnotationAssertion(Annotation( ) "manual digit 1 skeleton") AnnotationAssertion( "UBERON:5101463") AnnotationAssertion(rdfs:label "manual digit 1 digitopodial skeleton") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pedal digit digitopodial skeleton) AnnotationAssertion(Annotation( ) "A subdivision of the skeleton of the autopod consisting of the phalanges of pedal digit plus the associated metapodial element.") AnnotationAssertion( "this class represents a series of phalanges plus a metapodial element. In comparative anatomy terminology we would call this a 'digit', but the label 'digit' is sometimes used to exclude metapodials and to include soft tissue. This series of elements is hypothesized to be homologous to radials.") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "pedal digit") AnnotationAssertion(Annotation( ) "pedal digit skeleton") AnnotationAssertion( "UBERON:5101466") AnnotationAssertion(rdfs:label "pedal digit digitopodial skeleton") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (manual digit digitopodial skeleton) AnnotationAssertion(Annotation( ) "A subdivision of the skeleton of the autopod consisting of the phalanges of manual digit plus the associated metapodial element.") AnnotationAssertion( "this class represents a series of phalanges plus a metapodial element. In comparative anatomy terminology we would call this a 'digit', but the label 'digit' is sometimes used to exclude metapodials and to include soft tissue. This series of elements is hypothesized to be homologous to radials.") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "manual digit") AnnotationAssertion(Annotation( ) "manual digit skeleton") AnnotationAssertion( "UBERON:5102389") AnnotationAssertion(rdfs:label "manual digit digitopodial skeleton") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (individual digit of digitopodial skeleton) AnnotationAssertion(Annotation( ) "A subdivision of the skeleton of the autopod consisting of the phalanges of a single digit plus the associated metapodial element.") AnnotationAssertion( "this class represents a series of phalanges plus a metapodial element. In comparative anatomy terminology we would call this a 'digit', but the label 'digit' is sometimes used to exclude metapodials and to include soft tissue. This series of elements is hypothesized to be homologous to radials.") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "digit") AnnotationAssertion(Annotation( ) "digit skeleton") AnnotationAssertion( "UBERON:5102544") AnnotationAssertion(rdfs:label "individual digit of digitopodial skeleton") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (manual digit 2 digitopodial skeleton) AnnotationAssertion(Annotation( ) "A subdivision of the skeleton of the autopod consisting of the phalanges of manual digit 2 plus the associated metapodial element.") AnnotationAssertion( "this class represents a series of phalanges plus a metapodial element. In comparative anatomy terminology we would call this a 'digit', but the label 'digit' is sometimes used to exclude metapodials and to include soft tissue. This series of elements is hypothesized to be homologous to radials.") AnnotationAssertion(Annotation( ) Annotation( ) "manual digit II digitopodial skeleton") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "manual digit 2") AnnotationAssertion(Annotation( ) "manual digit 2 skeleton") AnnotationAssertion( "UBERON:5103622") AnnotationAssertion(rdfs:label "manual digit 2 digitopodial skeleton") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (manual digit 3 digitopodial skeleton) AnnotationAssertion(Annotation( ) "A subdivision of the skeleton of the autopod consisting of the phalanges of manual digit 3 plus the associated metapodial element.") AnnotationAssertion( "this class represents a series of phalanges plus a metapodial element. In comparative anatomy terminology we would call this a 'digit', but the label 'digit' is sometimes used to exclude metapodials and to include soft tissue. This series of elements is hypothesized to be homologous to radials.") AnnotationAssertion(Annotation( ) Annotation( ) "manual digit III digitopodial skeleton") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "manual digit 3") AnnotationAssertion(Annotation( ) "manual digit 3 skeleton") AnnotationAssertion( "UBERON:5103623") AnnotationAssertion(rdfs:label "manual digit 3 digitopodial skeleton") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (manual digit 4 digitopodial skeleton) AnnotationAssertion(Annotation( ) "A subdivision of the skeleton of the autopod consisting of the phalanges of manual digit 4 plus the associated metapodial element.") AnnotationAssertion( "this class represents a series of phalanges plus a metapodial element. In comparative anatomy terminology we would call this a 'digit', but the label 'digit' is sometimes used to exclude metapodials and to include soft tissue. This series of elements is hypothesized to be homologous to radials.") AnnotationAssertion(Annotation( ) Annotation( ) "manual digit IV digitopodial skeleton") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "manual digit 4") AnnotationAssertion(Annotation( ) "manual digit 4 skeleton") AnnotationAssertion( "UBERON:5103624") AnnotationAssertion(rdfs:label "manual digit 4 digitopodial skeleton") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (manual digit 5 digitopodial skeleton) AnnotationAssertion(Annotation( ) "A subdivision of the skeleton of the autopod consisting of the phalanges of manual digit 5 plus the associated metapodial element.") AnnotationAssertion( "this class represents a series of phalanges plus a metapodial element. In comparative anatomy terminology we would call this a 'digit', but the label 'digit' is sometimes used to exclude metapodials and to include soft tissue. This series of elements is hypothesized to be homologous to radials.") AnnotationAssertion(Annotation( ) Annotation( ) "manual digit V digitopodial skeleton") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "manual digit 5") AnnotationAssertion(Annotation( ) "manual digit 5 skeleton") AnnotationAssertion( "UBERON:5103625") AnnotationAssertion(rdfs:label "manual digit 5 digitopodial skeleton") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pedal digit 1 digitopodial skeleton) AnnotationAssertion(Annotation( ) "A subdivision of the skeleton of the autopod consisting of the phalanges of pedal digit 1 plus the associated metapodial element.") AnnotationAssertion( "this class represents a series of phalanges plus a metapodial element. In comparative anatomy terminology we would call this a 'digit', but the label 'digit' is sometimes used to exclude metapodials and to include soft tissue. This series of elements is hypothesized to be homologous to radials.") AnnotationAssertion(Annotation( ) Annotation( ) "pedal digit I digitopodial skeleton") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "pedal digit 1") AnnotationAssertion(Annotation( ) "pedal digit 1 skeleton") AnnotationAssertion( "UBERON:5103631") AnnotationAssertion(rdfs:label "pedal digit 1 digitopodial skeleton") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pedal digit 2 digitopodial skeleton) AnnotationAssertion(Annotation( ) "A subdivision of the skeleton of the autopod consisting of the phalanges of pedal digit 2 plus the associated metapodial element.") AnnotationAssertion( "this class represents a series of phalanges plus a metapodial element. In comparative anatomy terminology we would call this a 'digit', but the label 'digit' is sometimes used to exclude metapodials and to include soft tissue. This series of elements is hypothesized to be homologous to radials.") AnnotationAssertion(Annotation( ) Annotation( ) "pedal digit II digitopodial skeleton") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "pedal digit 2") AnnotationAssertion(Annotation( ) "pedal digit 2 skeleton") AnnotationAssertion( "UBERON:5103632") AnnotationAssertion(rdfs:label "pedal digit 2 digitopodial skeleton") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pedal digit 3 digitopodial skeleton) AnnotationAssertion(Annotation( ) "A subdivision of the skeleton of the autopod consisting of the phalanges of pedal digit 3 plus the associated metapodial element.") AnnotationAssertion( "this class represents a series of phalanges plus a metapodial element. In comparative anatomy terminology we would call this a 'digit', but the label 'digit' is sometimes used to exclude metapodials and to include soft tissue. This series of elements is hypothesized to be homologous to radials.") AnnotationAssertion(Annotation( ) Annotation( ) "pedal digit III digitopodial skeleton") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "pedal digit 3") AnnotationAssertion(Annotation( ) "pedal digit 3 skeleton") AnnotationAssertion( "UBERON:5103633") AnnotationAssertion(rdfs:label "pedal digit 3 digitopodial skeleton") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pedal digit 4 digitopodial skeleton) AnnotationAssertion(Annotation( ) "A subdivision of the skeleton of the autopod consisting of the phalanges of pedal digit 4 plus the associated metapodial element.") AnnotationAssertion( "this class represents a series of phalanges plus a metapodial element. In comparative anatomy terminology we would call this a 'digit', but the label 'digit' is sometimes used to exclude metapodials and to include soft tissue. This series of elements is hypothesized to be homologous to radials.") AnnotationAssertion(Annotation( ) Annotation( ) "pedal digit IV digitopodial skeleton") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "pedal digit 4") AnnotationAssertion(Annotation( ) "pedal digit 4 skeleton") AnnotationAssertion( "UBERON:5103634") AnnotationAssertion(rdfs:label "pedal digit 4 digitopodial skeleton") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pedal digit 5 digitopodial skeleton) AnnotationAssertion(Annotation( ) "A subdivision of the skeleton of the autopod consisting of the phalanges of pedal digit 5 plus the associated metapodial element.") AnnotationAssertion( "this class represents a series of phalanges plus a metapodial element. In comparative anatomy terminology we would call this a 'digit', but the label 'digit' is sometimes used to exclude metapodials and to include soft tissue. This series of elements is hypothesized to be homologous to radials.") AnnotationAssertion(Annotation( ) Annotation( ) "pedal digit V digitopodial skeleton") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "pedal digit 5") AnnotationAssertion(Annotation( ) "pedal digit 5 skeleton") AnnotationAssertion( "UBERON:5103635") AnnotationAssertion(rdfs:label "pedal digit 5 digitopodial skeleton") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (digit 1 digitopodial skeleton) AnnotationAssertion(Annotation( ) "A subdivision of the skeleton of the autopod consisting of the phalanges of digit 1 plus the associated metapodial element.") AnnotationAssertion( "this class represents a series of phalanges plus a metapodial element. In comparative anatomy terminology we would call this a 'digit', but the label 'digit' is sometimes used to exclude metapodials and to include soft tissue. This series of elements is hypothesized to be homologous to radials.") AnnotationAssertion(Annotation( ) Annotation( ) "digit I digitopodial skeleton") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "digit 1") AnnotationAssertion(Annotation( ) "digit 1 skeleton") AnnotationAssertion( "UBERON:5106048") AnnotationAssertion(rdfs:label "digit 1 digitopodial skeleton") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (digit 2 digitopodial skeleton) AnnotationAssertion(Annotation( ) "A subdivision of the skeleton of the autopod consisting of the phalanges of digit 2 plus the associated metapodial element.") AnnotationAssertion( "this class represents a series of phalanges plus a metapodial element. In comparative anatomy terminology we would call this a 'digit', but the label 'digit' is sometimes used to exclude metapodials and to include soft tissue. This series of elements is hypothesized to be homologous to radials.") AnnotationAssertion(Annotation( ) Annotation( ) "digit II digitopodial skeleton") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "digit 2") AnnotationAssertion(Annotation( ) "digit 2 skeleton") AnnotationAssertion( "UBERON:5106049") AnnotationAssertion(rdfs:label "digit 2 digitopodial skeleton") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (digit 3 digitopodial skeleton) AnnotationAssertion(Annotation( ) "A subdivision of the skeleton of the autopod consisting of the phalanges of digit 3 plus the associated metapodial element.") AnnotationAssertion( "this class represents a series of phalanges plus a metapodial element. In comparative anatomy terminology we would call this a 'digit', but the label 'digit' is sometimes used to exclude metapodials and to include soft tissue. This series of elements is hypothesized to be homologous to radials.") AnnotationAssertion(Annotation( ) Annotation( ) "digit III digitopodial skeleton") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "digit 3") AnnotationAssertion(Annotation( ) "digit 3 skeleton") AnnotationAssertion( "UBERON:5106050") AnnotationAssertion(rdfs:label "digit 3 digitopodial skeleton") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (digit 4 digitopodial skeleton) AnnotationAssertion(Annotation( ) "A subdivision of the skeleton of the autopod consisting of the phalanges of digit 4 plus the associated metapodial element.") AnnotationAssertion( "this class represents a series of phalanges plus a metapodial element. In comparative anatomy terminology we would call this a 'digit', but the label 'digit' is sometimes used to exclude metapodials and to include soft tissue. This series of elements is hypothesized to be homologous to radials.") AnnotationAssertion(Annotation( ) Annotation( ) "digit IV digitopodial skeleton") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "digit 4") AnnotationAssertion(Annotation( ) "digit 4 skeleton") AnnotationAssertion( "UBERON:5106051") AnnotationAssertion(rdfs:label "digit 4 digitopodial skeleton") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (digit 5 digitopodial skeleton) AnnotationAssertion(Annotation( ) "A subdivision of the skeleton of the autopod consisting of the phalanges of digit 5 plus the associated metapodial element.") AnnotationAssertion( "this class represents a series of phalanges plus a metapodial element. In comparative anatomy terminology we would call this a 'digit', but the label 'digit' is sometimes used to exclude metapodials and to include soft tissue. This series of elements is hypothesized to be homologous to radials.") AnnotationAssertion(Annotation( ) Annotation( ) "digit V digitopodial skeleton") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "digit 5") AnnotationAssertion(Annotation( ) "digit 5 skeleton") AnnotationAssertion( "UBERON:5106052") AnnotationAssertion(rdfs:label "digit 5 digitopodial skeleton") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (manual digit 6 digitopodial skeleton) AnnotationAssertion(Annotation( ) "A subdivision of the skeleton of the autopod consisting of the phalanges of manual digit 6 plus the associated metapodial element.") AnnotationAssertion( "this class represents a series of phalanges plus a metapodial element. In comparative anatomy terminology we would call this a 'digit', but the label 'digit' is sometimes used to exclude metapodials and to include soft tissue. This series of elements is hypothesized to be homologous to radials.") AnnotationAssertion(Annotation( ) Annotation( ) "manual digit VI digitopodial skeleton") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "manual digit 6") AnnotationAssertion(Annotation( ) "manual digit 6 skeleton") AnnotationAssertion( "UBERON:5111981") AnnotationAssertion(rdfs:label "manual digit 6 digitopodial skeleton") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (manual digit 7 digitopodial skeleton) AnnotationAssertion(Annotation( ) "A subdivision of the skeleton of the autopod consisting of the phalanges of manual digit 7 plus the associated metapodial element.") AnnotationAssertion( "this class represents a series of phalanges plus a metapodial element. In comparative anatomy terminology we would call this a 'digit', but the label 'digit' is sometimes used to exclude metapodials and to include soft tissue. This series of elements is hypothesized to be homologous to radials.") AnnotationAssertion(Annotation( ) Annotation( ) "manual digit VII digitopodial skeleton") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "manual digit 7") AnnotationAssertion(Annotation( ) "manual digit 7 skeleton") AnnotationAssertion( "UBERON:5111982") AnnotationAssertion(rdfs:label "manual digit 7 digitopodial skeleton") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (manual digit 8 digitopodial skeleton) AnnotationAssertion(Annotation( ) "A subdivision of the skeleton of the autopod consisting of the phalanges of manual digit 8 plus the associated metapodial element.") AnnotationAssertion( "this class represents a series of phalanges plus a metapodial element. In comparative anatomy terminology we would call this a 'digit', but the label 'digit' is sometimes used to exclude metapodials and to include soft tissue. This series of elements is hypothesized to be homologous to radials.") AnnotationAssertion(Annotation( ) Annotation( ) "manual digit VIII digitopodial skeleton") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "manual digit 8") AnnotationAssertion(Annotation( ) "manual digit 8 skeleton") AnnotationAssertion( "UBERON:5111983") AnnotationAssertion(rdfs:label "manual digit 8 digitopodial skeleton") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pedal digit 6 digitopodial skeleton) AnnotationAssertion(Annotation( ) "A subdivision of the skeleton of the autopod consisting of the phalanges of pedal digit 6 plus the associated metapodial element.") AnnotationAssertion( "this class represents a series of phalanges plus a metapodial element. In comparative anatomy terminology we would call this a 'digit', but the label 'digit' is sometimes used to exclude metapodials and to include soft tissue. This series of elements is hypothesized to be homologous to radials.") AnnotationAssertion(Annotation( ) Annotation( ) "pedal digit VI digitopodial skeleton") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "pedal digit 6") AnnotationAssertion(Annotation( ) "pedal digit 6 skeleton") AnnotationAssertion( "UBERON:5111984") AnnotationAssertion(rdfs:label "pedal digit 6 digitopodial skeleton") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pedal digit 7 digitopodial skeleton) AnnotationAssertion(Annotation( ) "A subdivision of the skeleton of the autopod consisting of the phalanges of pedal digit 7 plus the associated metapodial element.") AnnotationAssertion( "this class represents a series of phalanges plus a metapodial element. In comparative anatomy terminology we would call this a 'digit', but the label 'digit' is sometimes used to exclude metapodials and to include soft tissue. This series of elements is hypothesized to be homologous to radials.") AnnotationAssertion(Annotation( ) Annotation( ) "pedal digit VII digitopodial skeleton") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "pedal digit 7") AnnotationAssertion(Annotation( ) "pedal digit 7 skeleton") AnnotationAssertion( "UBERON:5112137") AnnotationAssertion(rdfs:label "pedal digit 7 digitopodial skeleton") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pedal digit 8 digitopodial skeleton) AnnotationAssertion(Annotation( ) "A subdivision of the skeleton of the autopod consisting of the phalanges of pedal digit 8 plus the associated metapodial element.") AnnotationAssertion( "this class represents a series of phalanges plus a metapodial element. In comparative anatomy terminology we would call this a 'digit', but the label 'digit' is sometimes used to exclude metapodials and to include soft tissue. This series of elements is hypothesized to be homologous to radials.") AnnotationAssertion(Annotation( ) Annotation( ) "pedal digit VIII digitopodial skeleton") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) Annotation( ) "pedal digit 8") AnnotationAssertion(Annotation( ) "pedal digit 8 skeleton") AnnotationAssertion( "UBERON:5112138") AnnotationAssertion(rdfs:label "pedal digit 8 digitopodial skeleton") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete embryonic germ layer derivative) AnnotationAssertion( "FBbt:00000000") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:6000000") AnnotationAssertion(rdfs:label "obsolete embryonic germ layer derivative") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (insect ring gland) AnnotationAssertion(Annotation( ) Annotation( "FlyBase:FBrf0064803") Annotation( "FlyBase:FBrf0089570") Annotation( "FlyBase:FBrf0179777") "A closely associated cluster of three neuroendocrine glands located anterior to the aorta and dorsal to the esophagus. At embryonic stage 17 and in larva it is found anterior to the brain and is formed by the corpus cardiacum ventrally, the prothoracic gland laterally and the corpus allatum dorsally. The adult ring gland is located anterior to the proventriculus and is formed by the corpus cardiacum ventrally, the corpus allatum dorsally and the hypocerebral ganglion posterior to the corpus cardiacum. It is innervated by neurons of the nervus corporis cardiaci (NccI-III).") AnnotationAssertion( "FBbt:00001722") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:6001722") AnnotationAssertion(rdfs:label "insect ring gland") SubClassOf( ) # Class: (insect imaginal precursor) AnnotationAssertion(Annotation( "FlyBase:FBrf0053815") Annotation( "FlyBase:FBrf0064789") "Structure that proliferates to produce a larval imaginal disc and which gives rise to adult tissues (Bate and Martinez Arias, 1991).") AnnotationAssertion( "FBbt:00005023") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:6005023") AnnotationAssertion(rdfs:label "insect imaginal precursor") SubClassOf( ) # Class: (obsolete visceral muscle) AnnotationAssertion(Annotation( ) Annotation( "FlyBase:FBrf0064793") Annotation( "FlyBase:FBrf0089570") "The visceral musculature comprises circular and longitudinal fibers which surround the entire intestinal tract, with the exception of the recurrent layer of the proventriculus. The circular fibers derive from a bilaterally symmetrical band of mesodermal cells extending continuously throughout most of the germ band. The longitudinal fibers derive from clusters of mesodermal cells which appear during stage 12 at the posterior end of the embryo and migrate anteriorly.") AnnotationAssertion( "CL:0008007") AnnotationAssertion( "FBbt:00005070") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:6005070") AnnotationAssertion(rdfs:label "obsolete visceral muscle") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (insect dorsal imaginal precursor) AnnotationAssertion( "FBbt:00005831") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:6005831") AnnotationAssertion(rdfs:label "insect dorsal imaginal precursor") SubClassOf( ) # Class: (obsolete endocrine system component) AnnotationAssertion( "FBbt:00007435") AnnotationAssertion( "uberon") AnnotationAssertion( "endocrine organ") AnnotationAssertion( "UBERON:6007435") AnnotationAssertion(rdfs:label "obsolete endocrine system component") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (distal-most point of medial condyle of femur) AnnotationAssertion(Annotation( ) "The distal-most point of the medial condyle of a femur.") AnnotationAssertion( "https://orcid.org/0000-0003-2699-3066") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:7500033") AnnotationAssertion(rdfs:label "distal-most point of medial condyle of femur") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (distal-most point of trochlea of humerus) AnnotationAssertion(Annotation( ) "The distal-most point of the trochlea of a humerus.") AnnotationAssertion( "https://orcid.org/0000-0003-2699-3066") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:7500034") AnnotationAssertion(rdfs:label "distal-most point of trochlea of humerus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (line from helix of outer ear to intertragus incisure) AnnotationAssertion(Annotation( ) "An anatomical line of a ear that connects the helix of the outer ear to the intertragus incisure of an ear.") AnnotationAssertion( "https://orcid.org/0000-0003-2699-3066") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:7500037") AnnotationAssertion(rdfs:label "line from helix of outer ear to intertragus incisure") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (line from the distal-most end of the longest nail to the posterior-most part of the foot) AnnotationAssertion(Annotation( ) "An anatomical line of a hindfoot that connects the distal-most part of the longest nail to the posterior-most part of a foot.") AnnotationAssertion( "https://orcid.org/0000-0003-2699-3066") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:7500038") AnnotationAssertion(rdfs:label "line from the distal-most end of the longest nail to the posterior-most part of the foot") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (posterior of pes) AnnotationAssertion(Annotation( ) "The posterior-most point of a foot.") AnnotationAssertion( "https://orcid.org/0000-0003-2699-3066") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:7500039") AnnotationAssertion(rdfs:label "posterior of pes") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (tip of nail) AnnotationAssertion(Annotation( ) "The distal-most point of a cutaneous appendage.") AnnotationAssertion( "https://orcid.org/0000-0003-2699-3066") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:7500040") AnnotationAssertion(rdfs:label "tip of nail") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete tip of digit) AnnotationAssertion(Annotation( ) "The distal-most point of a digit.") AnnotationAssertion( "UBERON:0009551") AnnotationAssertion( "https://orcid.org/0000-0003-2699-3066") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:7500041") AnnotationAssertion(rdfs:comment "duplicate with UBERON:0009551 'distal segment of digit'.") AnnotationAssertion(rdfs:label "obsolete tip of digit") AnnotationAssertion(rdfs:seeAlso "https://github.com/obophenotype/uberon/issues/1701") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (line from the distal-most end of the longest phalax of the foot to the posterior-most part of the foot) AnnotationAssertion(Annotation( ) "An anatomical line of a hindfoot that connects the end of the longest digit to the posterior-most part of a foot.") AnnotationAssertion( "https://orcid.org/0000-0003-2699-3066") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:7500042") AnnotationAssertion(rdfs:label "line from the distal-most end of the longest phalax of the foot to the posterior-most part of the foot") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (line from tip of nose to the caudal-sacral region of the vertebral column) AnnotationAssertion(Annotation( ) "An anatomical line of a body that connects the tip of the nose to the posterior-most part of the sacrum.") AnnotationAssertion( "https://orcid.org/0000-0003-2699-3066") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:7500043") AnnotationAssertion(rdfs:label "line from tip of nose to the caudal-sacral region of the vertebral column") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (line of medial condyle of femur to greater trochanter) AnnotationAssertion(Annotation( ) "An anatomical line of a femur that connects the medial condyle to the greater trochanter.") AnnotationAssertion( "https://orcid.org/0000-0003-2699-3066") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:7500045") AnnotationAssertion(rdfs:label "line of medial condyle of femur to greater trochanter") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (proximal-most point of head of femur) AnnotationAssertion(Annotation( ) "The proximal-most point of the head of a femur.") AnnotationAssertion( "https://orcid.org/0000-0003-2699-3066") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:7500046") AnnotationAssertion(rdfs:label "proximal-most point of head of femur") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (proximal-most point of head of humerus) AnnotationAssertion(Annotation( ) "The proximal-most point of the head of a humerus.") AnnotationAssertion( "https://orcid.org/0000-0003-2699-3066") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:7500047") AnnotationAssertion(rdfs:label "proximal-most point of head of humerus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (proximal-most point of ventral tubercle of humerus) AnnotationAssertion(Annotation( ) "The proximal-most point of the ventral tubercle of a humerus.") AnnotationAssertion( "https://orcid.org/0000-0003-2699-3066") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:7500048") AnnotationAssertion(rdfs:label "proximal-most point of ventral tubercle of humerus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (proximal-most point of greater trochanter of femur) AnnotationAssertion(Annotation( ) "The proximal-most point of the greater trochanter of a femur.") AnnotationAssertion( "https://orcid.org/0000-0003-2699-3066") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:7500049") AnnotationAssertion(rdfs:label "proximal-most point of greater trochanter of femur") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (line of medial condyle of femur to head of femur) AnnotationAssertion(Annotation( ) "An anatomical line of a femur that connects the medial condyle to the head of a femur.") AnnotationAssertion( "https://orcid.org/0000-0003-2699-3066") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:7500050") AnnotationAssertion(rdfs:label "line of medial condyle of femur to head of femur") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (line from trochlea of humerus to proximal head of humerus) AnnotationAssertion(Annotation( ) "An anatomical line of a humerus that connects the trochlea to the proximal head.") AnnotationAssertion( "https://orcid.org/0000-0003-2699-3066") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:7500051") AnnotationAssertion(rdfs:label "line from trochlea of humerus to proximal head of humerus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lower fourth secondary molar tooth) AnnotationAssertion(Annotation( ) "The molar tooth of the lower jaw that is phylogenetically number 4.") AnnotationAssertion( "https://orcid.org/0000-0003-2699-3066") AnnotationAssertion( "lower fourth permanent molar tooth") AnnotationAssertion( "uberon") AnnotationAssertion( "m4") AnnotationAssertion( "UBERON:7500052") AnnotationAssertion(rdfs:label "lower fourth secondary molar tooth") SubClassOf( ) # Class: (lower fourth secondary premolar tooth) AnnotationAssertion(Annotation( ) "The premolar tooth of the lower jaw that is phylogenetically number 4.") AnnotationAssertion( "https://orcid.org/0000-0003-2699-3066") AnnotationAssertion( "lower fourth permanent premolar tooth") AnnotationAssertion( "uberon") AnnotationAssertion( "p4") AnnotationAssertion( "UBERON:7500053") AnnotationAssertion(rdfs:label "lower fourth secondary premolar tooth") SubClassOf( ) SubClassOf( ) # Class: (lower third secondary premolar tooth) AnnotationAssertion(Annotation( ) "The premolar tooth of the lower jaw that is phylogenetically number 3.") AnnotationAssertion( "https://orcid.org/0000-0003-2699-3066") AnnotationAssertion( "lower third permanent premolar tooth") AnnotationAssertion( "uberon") AnnotationAssertion( "p3") AnnotationAssertion( "UBERON:7500054") AnnotationAssertion(rdfs:label "lower third secondary premolar tooth") SubClassOf( ) # Class: (molar tooth 4) AnnotationAssertion(Annotation( ) "The molar tooth of the upper or lower jaw that is phylogenetically number 4.") AnnotationAssertion( "https://orcid.org/0000-0003-2699-3066") AnnotationAssertion( "fourth molar tooth") AnnotationAssertion( "molar 4") AnnotationAssertion( "molar 4 tooth") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:7500055") AnnotationAssertion(rdfs:label "molar tooth 4") SubClassOf( ) # Class: (premolar 3) AnnotationAssertion(Annotation( ) "The premolar tooth of the upper or lower jaw that is phylogenetically number 3.") AnnotationAssertion( "https://orcid.org/0000-0003-2699-3066") AnnotationAssertion( "premolar tooth 3") AnnotationAssertion( "third premolar tooth") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:7500056") AnnotationAssertion(rdfs:label "premolar 3") SubClassOf( ) # Class: (upper fourth secondary molar tooth) AnnotationAssertion(Annotation( ) "The molar tooth of the upper jaw that is phylogenetically number 4.") AnnotationAssertion( "https://orcid.org/0000-0003-2699-3066") AnnotationAssertion( "upper fourth permanent molar tooth") AnnotationAssertion( "uberon") AnnotationAssertion( "M4") AnnotationAssertion( "UBERON:7500057") AnnotationAssertion(rdfs:label "upper fourth secondary molar tooth") SubClassOf( ) # Class: (upper fourth secondary premolar tooth) AnnotationAssertion(Annotation( ) "The premolar tooth of the upper jaw that is phylogenetically number 4.") AnnotationAssertion( "https://orcid.org/0000-0003-2699-3066") AnnotationAssertion( "upper fourth permanent premolar tooth") AnnotationAssertion( "uberon") AnnotationAssertion( "P4") AnnotationAssertion( "UBERON:7500058") AnnotationAssertion(rdfs:label "upper fourth secondary premolar tooth") SubClassOf( ) # Class: (upper third secondary premolar tooth) AnnotationAssertion(Annotation( ) "The premolar tooth of the upper jaw that is phylogenetically number 3.") AnnotationAssertion( "https://orcid.org/0000-0003-2699-3066") AnnotationAssertion( "upper third permanent premolar tooth") AnnotationAssertion( "uberon") AnnotationAssertion( "P3") AnnotationAssertion( "UBERON:7500059") AnnotationAssertion(rdfs:label "upper third secondary premolar tooth") SubClassOf( ) # Class: (line from trochlea of humerus to ventral tubercle of humerus) AnnotationAssertion(Annotation( ) "An anatomical line of a humerus that connects the trochlea to the ventral tubercle.") AnnotationAssertion( "https://orcid.org/0000-0003-2699-3066") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:7500060") AnnotationAssertion(rdfs:label "line from trochlea of humerus to ventral tubercle of humerus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (trochlear ridge of humerus) AnnotationAssertion(Annotation( ) "The ridge of the trochlea on a humerus lies in the middle of the distal end of a humerus on the lateral side of the trochlea and the medial side of the capitulum (capitellum).") AnnotationAssertion( ) AnnotationAssertion( "2021-05-27T23:57:42Z"^^xsd:dateTime) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:7500061") AnnotationAssertion(rdfs:label "trochlear ridge of humerus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (tibial tuberosity) AnnotationAssertion(Annotation( ) "The tibial tuberosity is on the anterior side of a tibia and is where a patella ligament attaches.") AnnotationAssertion( ) AnnotationAssertion( "2021-05-28T00:06:11Z"^^xsd:dateTime) AnnotationAssertion( "fossa digitalis") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:7500062") AnnotationAssertion(rdfs:label "tibial tuberosity") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (trochlea of talus) AnnotationAssertion(Annotation( ) "The articular surface of a talus that interacts with a tibia. It has a deep depression that forms the trochlear groove and is bounded by the medial and lateral condyles.") AnnotationAssertion( ) AnnotationAssertion( "2021-05-28T00:56:19Z"^^xsd:dateTime) AnnotationAssertion( "trochlea for tibia") AnnotationAssertion( "trochlea of astragalus") AnnotationAssertion( "trochlea tali") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:7500063") AnnotationAssertion(rdfs:label "trochlea of talus") SubClassOf( ) # Class: (trochlear groove of talus) AnnotationAssertion(Annotation( ) "The furrow between the lateral and medial condyles of the trochlea of talus.") AnnotationAssertion( ) AnnotationAssertion( "2021-05-28T00:57:49Z"^^xsd:dateTime) AnnotationAssertion( "trochlear groove of astragalus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:7500064") AnnotationAssertion(rdfs:label "trochlear groove of talus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (condyle of talus) AnnotationAssertion(Annotation( ) "An articular prominence of a talus that engages with the tibia.") AnnotationAssertion( ) AnnotationAssertion( "2021-05-28T00:59:42Z"^^xsd:dateTime) AnnotationAssertion( "condyle of astragalus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:7500065") AnnotationAssertion(rdfs:label "condyle of talus") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (medial condyle of talus) AnnotationAssertion(Annotation( ) "The medial condyle of talus is an articular prominence of bone on medial side of the trochlea of a talus, which engages with the tibia.") AnnotationAssertion( ) AnnotationAssertion( "2021-05-28T01:00:50Z"^^xsd:dateTime) AnnotationAssertion( "medial condyle of astragalus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:7500066") AnnotationAssertion(rdfs:label "medial condyle of talus") SubClassOf( ) # Class: (lateral condyle of talus) AnnotationAssertion(Annotation( ) "The lateral condyle of talus is an articular prominence of bone on the lateral side of the trochlea of a talus, which engages with the tibia.") AnnotationAssertion( ) AnnotationAssertion( "2021-05-28T01:02:26Z"^^xsd:dateTime) AnnotationAssertion( "lateral condyle of astragalus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:7500067") AnnotationAssertion(rdfs:label "lateral condyle of talus") SubClassOf( ) # Class: (ridge of medial condyle of talus) AnnotationAssertion(Annotation( ) "The crest of the medial condyle of a talus.") AnnotationAssertion( ) AnnotationAssertion( "2021-05-28T01:03:10Z"^^xsd:dateTime) AnnotationAssertion( "ridge of medial condyle of astragalus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:7500068") AnnotationAssertion(rdfs:label "ridge of medial condyle of talus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (ridge of lateral condyle of talus) AnnotationAssertion(Annotation( ) "The crest of the lateral condyle of a talus.") AnnotationAssertion( ) AnnotationAssertion( "2021-05-28T01:03:51Z"^^xsd:dateTime) AnnotationAssertion( "ridge of lateral condyle of astragalus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:7500069") AnnotationAssertion(rdfs:label "ridge of lateral condyle of talus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (sulcus tali) AnnotationAssertion(Annotation( ) "A depression that runs between the two facets of a talus that interact with a calcaneum.") AnnotationAssertion( ) AnnotationAssertion( "2021-05-28T01:09:52Z"^^xsd:dateTime) AnnotationAssertion( "sulcus for flexor hallucis longus tendon") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:7500070") AnnotationAssertion(rdfs:label "sulcus tali") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (trochlea of femur) AnnotationAssertion(Annotation( ) "A trochlea on the distal end of a femur that interacts with the patella.") AnnotationAssertion( "2021-06-02T00:19:07Z"^^xsd:dateTime) AnnotationAssertion( "patellar surface of femur") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:7500077") AnnotationAssertion(rdfs:label "trochlea of femur") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (styloid process of radius) AnnotationAssertion(Annotation( ) "A condyle on the distal end and lateral side of a radius.") AnnotationAssertion( ) AnnotationAssertion( "2021-06-03T00:20:10Z"^^xsd:dateTime) AnnotationAssertion( "radial condyle") AnnotationAssertion( "radial styloid process") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:7500078") AnnotationAssertion(rdfs:label "styloid process of radius") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (articular surface for carpals) AnnotationAssertion(Annotation( ) "The articular surface on the distal end of a radius that interacts with carpals.") AnnotationAssertion( ) AnnotationAssertion( "2021-06-03T00:23:08Z"^^xsd:dateTime) AnnotationAssertion( "distal articular surface of radius") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:7500080") AnnotationAssertion(rdfs:label "articular surface for carpals") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (articular surface for the tibia on the talus) AnnotationAssertion(Annotation( ) "Contact surface between the tibia and the talus located on the talus.") AnnotationAssertion( ) AnnotationAssertion( "2021-07-27T17:04:35Z"^^xsd:dateTime) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:7500081") AnnotationAssertion(rdfs:label "articular surface for the tibia on the talus") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (greater palatine foramen) AnnotationAssertion(Annotation( ) Annotation( "FMA:53173") Annotation( "WikipediaVersioned:Greater_palatine_foramen&oldid=971687677") "A foramen of the skull found at either posterior angle of the hard palate, for the transmission of the descending palatine vessels and greater palatine nerve.") AnnotationAssertion( ) AnnotationAssertion( "2021-07-28T20:01:21Z"^^xsd:dateTime) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:7500083") AnnotationAssertion(rdfs:label "greater palatine foramen") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lesser palatine foramen) AnnotationAssertion(Annotation( ) Annotation( "FMA:53167") Annotation( "WikipediaVersioned:Lesser_palatine_foramina&oldid=870872639") "A foramen of the skull found at either posterior angle of the hard palate behind the greater palatine foramen. One or more lesser palatine foramina perforate the pyramidal process of the palatine bone and carry the lesser palatine nerve.") AnnotationAssertion( ) AnnotationAssertion( "2021-07-28T20:07:21Z"^^xsd:dateTime) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:7500084") AnnotationAssertion(rdfs:label "lesser palatine foramen") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (obsolete distal articular surface of radius) AnnotationAssertion( "UBERON:7500080") AnnotationAssertion( ) AnnotationAssertion( "2021-08-03T21:28:12Z"^^xsd:dateTime) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:7500088") AnnotationAssertion(rdfs:comment "already made this term") AnnotationAssertion(rdfs:label "obsolete distal articular surface of radius") AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (posterior articular facet for talus of calcaneus) AnnotationAssertion(Annotation( ) "Posterior-most facet on the proximal surface of the calcaneus for the articulation of the talus bone.") AnnotationAssertion( ) AnnotationAssertion( "2021-08-04T00:14:22Z"^^xsd:dateTime) AnnotationAssertion( "proximal facet of calcaneum") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:7500089") AnnotationAssertion(rdfs:label "posterior articular facet for talus of calcaneus") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (middle articular facet for talus of calcaneus) AnnotationAssertion(Annotation( ) "Middle facet on the proximal surface of the calcaneus for the articulation of the talus bone.") AnnotationAssertion( ) AnnotationAssertion( "2021-08-04T00:19:10Z"^^xsd:dateTime) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:7500091") AnnotationAssertion(rdfs:label "middle articular facet for talus of calcaneus") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (anterior articular facet for talus of calcaneus) AnnotationAssertion(Annotation( ) "Anterior-most facet on the proximal surface of the calcaneus for the articulation of the talus bone.") AnnotationAssertion( ) AnnotationAssertion( "2021-08-04T00:21:34Z"^^xsd:dateTime) AnnotationAssertion( "distal facet of calcaneum") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:7500092") AnnotationAssertion(rdfs:label "anterior articular facet for talus of calcaneus") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (calcaneal body) AnnotationAssertion(Annotation( ) "The calcaneus body is the part of the bone not used for articulation with other bones.") AnnotationAssertion( ) AnnotationAssertion( "2021-08-04T00:23:29Z"^^xsd:dateTime) AnnotationAssertion( "corpus calcanei") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:7500093") AnnotationAssertion(rdfs:label "calcaneal body") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (tubercle of calcaneus) AnnotationAssertion(Annotation( ) "A raised projection on the calcaneus.") AnnotationAssertion( ) AnnotationAssertion( "2021-08-04T00:25:01Z"^^xsd:dateTime) AnnotationAssertion( "calcaneal tubercle") AnnotationAssertion( "trochlear process of calcaneus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:7500094") AnnotationAssertion(rdfs:label "tubercle of calcaneus") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lateral tubercle of calcaneus) AnnotationAssertion(Annotation( ) "A raised projection on the lateral side of a calcaneus.") AnnotationAssertion( ) AnnotationAssertion( "2021-08-04T00:26:41Z"^^xsd:dateTime) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:7500095") AnnotationAssertion(rdfs:label "lateral tubercle of calcaneus") SubClassOf( ) # Class: (medial tubercle of calcaneus) AnnotationAssertion(Annotation( ) "A raised projection on the medial side of a calcaneus.") AnnotationAssertion( ) AnnotationAssertion( "2021-08-04T00:27:56Z"^^xsd:dateTime) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:7500096") AnnotationAssertion(rdfs:label "medial tubercle of calcaneus") SubClassOf( ) # Class: (first instar larva stage) AnnotationAssertion(Annotation( "IDOMAL:0000656") "The first stage of instar larva stage.") AnnotationAssertion( "http://orcid.org/0000-0001-5208-3432") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:8000000") AnnotationAssertion(rdfs:label "first instar larva stage") SubClassOf( ) # Class: (second instar larva stage) AnnotationAssertion(Annotation( "IDOMAL:0000657") "The second stage of instar larva stage.") AnnotationAssertion( "http://orcid.org/0000-0001-5208-3432") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:8000001") AnnotationAssertion(rdfs:label "second instar larva stage") SubClassOf( ) # Class: (third instar larva stage) AnnotationAssertion(Annotation( "IDOMAL:0000658") "The third stage of instar larva stage.") AnnotationAssertion( "http://orcid.org/0000-0001-5208-3432") AnnotationAssertion( "third instar larva") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:8000002") AnnotationAssertion(rdfs:label "third instar larva stage") SubClassOf( ) # Class: (fourth instar larva stage) AnnotationAssertion(Annotation( "IDOMAL:0000659") "The fourth stage of instar larva stage.") AnnotationAssertion( "http://orcid.org/0000-0001-5208-3432") AnnotationAssertion( "fourth instar larva") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:8000003") AnnotationAssertion(rdfs:label "fourth instar larva stage") SubClassOf( ) # Class: (central retina) AnnotationAssertion(Annotation( ) "Region of retina around the fovea that extends approximately for 6 mm. Central retina is considerably thick due to increased density of photoreceptors, particularly cones and their associated bipolar and ganglion cells.") AnnotationAssertion( "http://orcid.org/0000-0001-5208-3432") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:8000004") AnnotationAssertion(rdfs:label "central retina") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (Henle's fiber layer) AnnotationAssertion(Annotation( ) "This layer contains bundles of unmyelinated cone and rod photoreceptor axons terminating in the pedicles and spherules that synapse in the retinal outer plexiform layer (OPL).") AnnotationAssertion( "http://orcid.org/0000-0001-5208-3432") AnnotationAssertion( "HFL") AnnotationAssertion( "Henle fiber layer") AnnotationAssertion( "nerve fiber layer of Henle") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:8000005") AnnotationAssertion(rdfs:label "Henle's fiber layer") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (left side of back) AnnotationAssertion(Annotation( ) "Left part of the organism dorsal to a horizontal plane and bounded on one side by the same transverse plane.") AnnotationAssertion( "http://orcid.org/0000-0001-5208-3432") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:8000006") AnnotationAssertion(rdfs:label "left side of back") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (right side of back) AnnotationAssertion(Annotation( ) "Right part of the organism dorsal to a horizontal plane and bounded on one side by the same transverse plane.") AnnotationAssertion( "http://orcid.org/0000-0001-5208-3432") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:8000007") AnnotationAssertion(rdfs:label "right side of back") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (cementocyte lacuna) AnnotationAssertion(Annotation( ) Annotation( "MP:0030555") "The small cavity within the cellular cementum that is occupied by a cementocyte cell body.") AnnotationAssertion( "http://orcid.org/0000-0001-5208-3432") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:8000008") AnnotationAssertion(rdfs:label "cementocyte lacuna") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (Purkinje fiber network) AnnotationAssertion(Annotation( ) "A collection of Purkinje fibers that receives signals from the right and left bundle branches and innervates the ventricular cardiac muscle. The Purkinje fiber network creates synchronized contractions of the heart ventricles.") AnnotationAssertion( "http://orcid.org/0000-0001-5208-3432") AnnotationAssertion(Annotation( ) "Purkinje fibre network") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:8000009") AnnotationAssertion(rdfs:label "Purkinje fiber network") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (copepodite stage 1) AnnotationAssertion(Annotation( ) "A development stage of copepods which immediately follows the nauplius stage. It is characterized by the presence of 2 swimming legs.") AnnotationAssertion( ) AnnotationAssertion( "2021-07-26T14:57:48Z"^^xsd:dateTime) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:8200002") AnnotationAssertion(rdfs:label "copepodite stage 1") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (copepodite stage 2) AnnotationAssertion(Annotation( ) "A development stage of copepods which immediately follows copepodite stage 1. It is characterized by the presence of 3 swimming legs.") AnnotationAssertion( ) AnnotationAssertion( "2021-07-26T15:07:18Z"^^xsd:dateTime) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:8200003") AnnotationAssertion(rdfs:label "copepodite stage 2") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (copepodite stage 3) AnnotationAssertion(Annotation( ) "A development stage of copepods which immediately follows copepodite stage 2. It is characterized by the presence of 4 swimming legs.") AnnotationAssertion( ) AnnotationAssertion( "2021-07-26T15:43:37Z"^^xsd:dateTime) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:8200004") AnnotationAssertion(rdfs:label "copepodite stage 3") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (copepodite stage 4) AnnotationAssertion(Annotation( ) "A development stage of copepods which immediately follows copepodite stage 3. It is characterized by the presence of 5 swimming legs.") AnnotationAssertion( ) AnnotationAssertion( "2021-07-26T15:45:12Z"^^xsd:dateTime) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:8200005") AnnotationAssertion(rdfs:label "copepodite stage 4") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (copepodite stage 5) AnnotationAssertion(Annotation( ) "A pre-adult stage of copepods which immediately follows copepodite stage 4. It is characterized by enlargement of the urosome and development of sexual organs.") AnnotationAssertion( ) AnnotationAssertion( "2021-07-26T15:46:40Z"^^xsd:dateTime) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:8200006") AnnotationAssertion(rdfs:label "copepodite stage 5") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (copepodite stage 6) AnnotationAssertion(Annotation( ) "A fully formed stage of copepods which immediately follows copepodite stage 5. It is characterized by the complete development of the fifth swimming leg.") AnnotationAssertion( ) AnnotationAssertion( "2021-07-26T15:48:54Z"^^xsd:dateTime) AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:8200007") AnnotationAssertion(rdfs:label "copepodite stage 6") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (skin of scalp) AnnotationAssertion(Annotation( ) "A zone of skin that is part of a scalp.") AnnotationAssertion( "http://orcid.org/0000-0001-9897-3238") AnnotationAssertion( "FMA:24757") AnnotationAssertion( "adult scalp zone of skin") AnnotationAssertion( "scalp skin") AnnotationAssertion( "scalp zone of skin") AnnotationAssertion( "zone of skin of adult scalp") AnnotationAssertion( "zone of skin of scalp") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:8300000") AnnotationAssertion(rdfs:label "skin of scalp") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (right forelimb) AnnotationAssertion(Annotation( "UBERONREF:0000003"^^xsd:string) "A forelimb that is on the right side of a pectoral complex.") AnnotationAssertion( "https://github.com/obophenotype/uberon/wiki/Modeling-paired-structures-Design-Pattern"^^xsd:anyURI) AnnotationAssertion( "http://orcid.org/0000-0001-9897-3238") AnnotationAssertion( "FMA:7185") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:8300001") AnnotationAssertion(rdfs:label "right forelimb") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (left forelimb) AnnotationAssertion(Annotation( "UBERONREF:0000003"^^xsd:string) "A forelimb that is on the left side of a pectoral complex.") AnnotationAssertion( "https://github.com/obophenotype/uberon/wiki/Modeling-paired-structures-Design-Pattern"^^xsd:anyURI) AnnotationAssertion( "http://orcid.org/0000-0001-9897-3238") AnnotationAssertion( "FMA:7186") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:8300002") AnnotationAssertion(rdfs:label "left forelimb") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (right hindlimb) AnnotationAssertion(Annotation( "UBERONREF:0000003"^^xsd:string) "A hindlimb that is on the right side of a pelvic complex.") AnnotationAssertion( "https://github.com/obophenotype/uberon/wiki/Modeling-paired-structures-Design-Pattern"^^xsd:anyURI) AnnotationAssertion( "http://orcid.org/0000-0001-9897-3238") AnnotationAssertion( "FMA:7187") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:8300003") AnnotationAssertion(rdfs:label "right hindlimb") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (left hindlimb) AnnotationAssertion(Annotation( "UBERONREF:0000003"^^xsd:string) "A hindlimb that is on the left side of a pelvic complex.") AnnotationAssertion( "https://github.com/obophenotype/uberon/wiki/Modeling-paired-structures-Design-Pattern"^^xsd:anyURI) AnnotationAssertion( "http://orcid.org/0000-0001-9897-3238") AnnotationAssertion( "FMA:7188") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:8300004") AnnotationAssertion(rdfs:label "left hindlimb") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (hepatic acinus zone 1) AnnotationAssertion(Annotation( ) "The region of the hepatic acinus that is closest to the arterial blood supply and has the highest oxygen concentration. Zone 1 is located in the periportal region of the liver lobule, closest to the portal triad. Hepatocytes in this region are primarily involved in oxidative energy metabolism.") AnnotationAssertion( "Mammalia") AnnotationAssertion( "http://orcid.org/0000-0003-2034-601X") AnnotationAssertion( "2020-09-08T14:14:21Z") AnnotationAssertion(Annotation( ) "hepatic acinus periportal zone") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:8400001") AnnotationAssertion(rdfs:label "hepatic acinus zone 1") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) # Class: (hepatic acinus zone 3) AnnotationAssertion(Annotation( ) "The region of the hepatic acinus immediately surrounding the central veins. This region has the lowest oxygen concentration in the acinus. Zone 3 is located in the centrilobular region of the liver lobule, closest to the central vein. Hepatocytes in this region are the primary location for the biotransformation of drugs.") AnnotationAssertion( "Mammalia") AnnotationAssertion( "http://orcid.org/0000-0003-2034-601X") AnnotationAssertion( "2020-09-08T15:05:03Z") AnnotationAssertion(Annotation( ) "hepatic acinus centrilobular zone") AnnotationAssertion(Annotation( ) "hepatic acinus pericentral zone") AnnotationAssertion(Annotation( ) "hepatic acinus perivenous zone") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:8400002") AnnotationAssertion(rdfs:label "hepatic acinus zone 3") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) # Class: (hepatic acinus zone 2) AnnotationAssertion(Annotation( ) "The region of the hepatic acinus in between zones 1 and 3. Blood in this region has an intermediate oxygen concentration relative to the other two zones of the hepatic acinus. Zone 2 is located in the midzonal region of the liver lobule. Hepatocytes in this region have mixed functionality in comparison with those in zones 1 and 3.") AnnotationAssertion( "Mammalia") AnnotationAssertion( "http://orcid.org/0000-0003-2034-601X") AnnotationAssertion( "2020-09-08T15:15:57Z") AnnotationAssertion(Annotation( ) "hepatic acinus intermediary zone") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:8400003") AnnotationAssertion(rdfs:label "hepatic acinus zone 2") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (metabolic zone of liver) AnnotationAssertion(Annotation( ) Annotation( ) "Any of the metabolic zones found in the liver. Liver tissue is heterogenous at the level of morphometry and histochemistry. This heterogeneity is linked to the position of a cell within the functional unit of the tissue, which, in turn, is related to the blood supply: cells located in the upstream zone differ from those in the downstream zone with respect to subcellular structures, key enzymes, translocators, and receptors and, therefore, have different metabolic capacities. This is the basis for 'metabolic zonation', a concept first proposed in mammals for carbohydrate metabolism and later expanded to include amino acid and ammonia metabolism, xenobiotic metabolism, protective metabolism, and formation of plasma proteins.") AnnotationAssertion( "Mammalia") AnnotationAssertion( "http://orcid.org/0000-0003-2034-601X") AnnotationAssertion( "2020-09-29T15:45:36Z") AnnotationAssertion(Annotation( ) "hepatic acinus metabolic zone") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:8400005") AnnotationAssertion(rdfs:label "metabolic zone of liver") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (liver lobule periportal region) AnnotationAssertion(Annotation( ) "The region of the liver lobule that is closest to the portal triad. The functionally-defined hepatic acinus zone 1 is generally found in this region.") AnnotationAssertion( "Mammalia") AnnotationAssertion( "http://orcid.org/0000-0003-2034-601X") AnnotationAssertion( "2020-10-05T12:56:57Z") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "hepatic acinus zone 1") AnnotationAssertion( "UBERON:8400006") AnnotationAssertion(rdfs:label "liver lobule periportal region") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) SubClassOf( ObjectSomeValuesFrom( )) # Class: (liver lobule centrilobular region) AnnotationAssertion(Annotation( ) "The region of the liver lobule that is closest to the central vein. The functionally-defined hepatic acinus zone 3 is generally found in this region.") AnnotationAssertion( "Mammalia") AnnotationAssertion( "http://orcid.org/0000-0003-2034-601X") AnnotationAssertion( "2020-10-05T15:43:18Z") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "hepatic acinus zone 3") AnnotationAssertion( "UBERON:8400007") AnnotationAssertion(rdfs:label "liver lobule centrilobular region") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) SubClassOf( ObjectSomeValuesFrom( )) # Class: (liver lobule midzonal region) AnnotationAssertion(Annotation( ) "The region of the liver lobule that is between the periportal and centrilobular regions. The functionally-defined hepatic acinus zone 2 is generally found in this region.") AnnotationAssertion( "Mammalia") AnnotationAssertion( "http://orcid.org/0000-0003-2034-601X") AnnotationAssertion( "2020-10-05T15:52:22Z") AnnotationAssertion( "uberon") AnnotationAssertion(Annotation( ) "hepatic acinus zone 2") AnnotationAssertion( "UBERON:8400008") AnnotationAssertion(rdfs:label "liver lobule midzonal region") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (liver serosa) AnnotationAssertion(Annotation( ) Annotation( ) "Hepatic serous coat; peritoneal covering of the liver, enclosing almost all except for a triangular area on its posterior surface (the 'bare area of the liver') and a smaller area where the liver and gallbladder are in direct contact.") AnnotationAssertion( "https://orcid.org/0000-0003-2034-601X") AnnotationAssertion(Annotation( "FMA:15811") "serosa of liver") AnnotationAssertion(Annotation( "LATIN") Annotation( ) "tunica serosa hepatis") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:8400021") AnnotationAssertion(rdfs:label "liver serosa") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (liver subserosa) AnnotationAssertion(Annotation( ) Annotation( ) Annotation( "FMA:15812") "Subserosal tissue of liver. A zone of areolar connective tissue lying beneath the serous coat of the liver and distinguished with difficulty from the fibrous capsule of Glisson.") AnnotationAssertion( "https://orcid.org/0000-0003-2034-601X") AnnotationAssertion( "hepatic subserosa") AnnotationAssertion( "subserosal tissue of liver") AnnotationAssertion( "subserous layer of liver") AnnotationAssertion(Annotation( "FMA:15821") "tela subserosa (hepar)") AnnotationAssertion(Annotation( ) "tela subserosa hepatis") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:8400023") AnnotationAssertion(rdfs:label "liver subserosa") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (subcapsular region of liver) AnnotationAssertion(Annotation( ) Annotation( ) "Region of liver parenchyma immediately below the capsule. This region is frequently specified in pathology diagnoses.") AnnotationAssertion( "https://orcid.org/0000-0003-2034-601X") AnnotationAssertion(Annotation( ) "liver subcapsular region") AnnotationAssertion(Annotation( ) "liver subcapsular tissue") AnnotationAssertion(Annotation( ) "subcapsular tissue of liver") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:8400024") AnnotationAssertion(rdfs:label "subcapsular region of liver") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (duodeno-jejunal junction) AnnotationAssertion(Annotation( ) Annotation( ) "The anatomical junction between the duodenum and the jejunum.") AnnotationAssertion( ) AnnotationAssertion( "FMA:15957") AnnotationAssertion( "TA2:2952") AnnotationAssertion( "WikipediaVersioned:Duodenojejunal_flexure&oldid=937307798") AnnotationAssertion( "duodeno-jejunal flexure") AnnotationAssertion( "duodenojejunal flexure") AnnotationAssertion( "duodenojejunal junction") AnnotationAssertion(Annotation( ) Annotation( ) "flexura duodenojejunalis") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:8410000") AnnotationAssertion(rdfs:label "duodeno-jejunal junction") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (small intestine venule) AnnotationAssertion(Annotation( ) "Venule of villus of small intestine.") AnnotationAssertion( "http://orcid.org/0000-0002-2825-0621") AnnotationAssertion( "venule of small intestine") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:8410001") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "small intestine venule") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (small intestine lymphatic vessel) AnnotationAssertion(Annotation( ) "A lymphatic vessel that supplies the small intestine.") AnnotationAssertion( "http://orcid.org/0000-0002-2825-0621") AnnotationAssertion( "lymphatic vessel of small intestine") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:8410002") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "small intestine lymphatic vessel") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (ductal plate) AnnotationAssertion(Annotation( ) Annotation( ) "In human, ductal plate is a double-layered cylindrical structure of bile duct epithelium that surrounds the portal ramifications by the eighth gestational week. After approximately the 12th gestational week, remodelling of ductal plate begins, and maturity is attained by the end of gestation or early postnatal period.") AnnotationAssertion( "Mammalia") AnnotationAssertion( "Temporal stages still need to be fully researched across species.") AnnotationAssertion( "http://orcid.org/0000-0002-2825-0621") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:8410003") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "ductal plate") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (small intestine arteriole) AnnotationAssertion(Annotation( ) "Arteriole of villus of small intestine.") AnnotationAssertion( "http://orcid.org/0000-0002-2825-0621") AnnotationAssertion( "arteriole of small intestine") AnnotationAssertion( "arteriole of villus of small intestine") AnnotationAssertion( "small intestine villus arteriole") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:8410004") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "small intestine arteriole") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (transitional glandular epithelium of anorectum) AnnotationAssertion(Annotation( ) Annotation( ) "Glandular epithelium of the anal transition zone. The anal transition zone is defined loosely as the tissue interposed between the uninterrupted squamous epithelium of the anoderm and the uninterrupted mucosal epithelium of the anal canal in the anorectum.") AnnotationAssertion( "http://orcid.org/0000-0002-2825-0621") AnnotationAssertion( "anorectum transitional glandular epithelium") AnnotationAssertion( "glandular epithelium of anal transition zone") AnnotationAssertion( "glandular epithelium of the anal transition zone") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:8410005") AnnotationAssertion(rdfs:label "transitional glandular epithelium of anorectum") SubClassOf( ) SubClassOf( ) # Class: (submucous nerve plexus of anorectum) AnnotationAssertion(Annotation( ) "Submucous nerve plexus that is located in the anorectum.") AnnotationAssertion( "http://orcid.org/0000-0002-2825-0621") AnnotationAssertion( "anorectum submucous nerve plexus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:8410006") AnnotationAssertion(rdfs:label "submucous nerve plexus of anorectum") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (myenteric nerve plexus of anorectum) AnnotationAssertion(Annotation( ) "Myenteric nerve plexus that is located in the anorectum.") AnnotationAssertion( "http://orcid.org/0000-0002-2825-0621") AnnotationAssertion( "anorectum myenteric nerve plexus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:8410007") AnnotationAssertion(rdfs:label "myenteric nerve plexus of anorectum") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (venule of anorectum) AnnotationAssertion(Annotation( ) "A venule that is located in the anorectum.") AnnotationAssertion( "http://orcid.org/0000-0002-2825-0621") AnnotationAssertion( "anorectum venule") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:8410008") AnnotationAssertion(rdfs:label "venule of anorectum") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (arteriole of anorectum) AnnotationAssertion(Annotation( ) "An arteriole that is located in the anorectum.") AnnotationAssertion( "http://orcid.org/0000-0002-2825-0621") AnnotationAssertion( "anorectum arteriole") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:8410009") AnnotationAssertion(rdfs:label "arteriole of anorectum") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (fimbria of uterine tube) AnnotationAssertion(Annotation( "WikipediaVersioned:Fallopian_tube&oldid=998395727") "A fringe of tissue around the ostium of the fallopian tube, in the direction of the ovary.") AnnotationAssertion( "Mammalia") AnnotationAssertion( "http://orcid.org/0000-0002-2825-0621") AnnotationAssertion( ) AnnotationAssertion( "FMA:18308") AnnotationAssertion( "fimbria of fallopian tube") AnnotationAssertion( "fimbriae of fallopian tube") AnnotationAssertion( "fimbriae of uterine tube") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:8410010") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "fimbria of uterine tube") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (myenteric nerve plexus of appendix) AnnotationAssertion(Annotation( ) "Myenteric nerve plexus that is located in the vermiform appendix.") AnnotationAssertion( "http://orcid.org/0000-0002-2825-0621") AnnotationAssertion( "myenteric nerve plexus of appendix vermiformis") AnnotationAssertion( "myenteric nerve plexus of vermiform appendix") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:8410011") AnnotationAssertion(rdfs:label "myenteric nerve plexus of appendix") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (submucous nerve plexus of appendix) AnnotationAssertion(Annotation( ) "Submucous nerve plexus that is located in the vermiform appendix.") AnnotationAssertion( "http://orcid.org/0000-0002-2825-0621") AnnotationAssertion( "submucous nerve plexus of appendix vermiformis") AnnotationAssertion( "submucous nerve plexus of vermiform appendix") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:8410012") AnnotationAssertion(rdfs:label "submucous nerve plexus of appendix") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (afferent lymphatic vessel valve) AnnotationAssertion(Annotation( ) "A valve in an afferent lymphatic vessel. It manages the flow of lymphatic fluid into the lymph node carrying immune cells and is essential for the correct flow of fluid through the lymphatic system.") AnnotationAssertion( "http://orcid.org/0000-0002-2825-0621") AnnotationAssertion( "valve of afferent lymphatic vessel") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:8410013") AnnotationAssertion(rdfs:label "afferent lymphatic vessel valve") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (efferent lymphatic vessel valve) AnnotationAssertion(Annotation( ) "A valve in an efferent lymphatic vessel. It manages the flow of lymphatic fluid out of the lymph node carrying immune cells and is essential for the correct flow of fluid through the lymphatic system.") AnnotationAssertion( "http://orcid.org/0000-0002-2825-0621") AnnotationAssertion( "valve of efferent lymphatic vessel") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:8410014") AnnotationAssertion(rdfs:label "efferent lymphatic vessel valve") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (arteriole of colon) AnnotationAssertion(Annotation( ) Annotation( ) "An arteriole located in the colon.") AnnotationAssertion( "http://orcid.org/0000-0002-2825-0621") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:8410015") AnnotationAssertion(rdfs:label "arteriole of colon") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (descending sigmoid junction) AnnotationAssertion(Annotation( ) Annotation( ) "The anatomical junction between the descending colon and the sigmoid colon.") AnnotationAssertion( "http://orcid.org/0000-0002-2825-0621") AnnotationAssertion( "sigmoid junction") AnnotationAssertion( "descending-sigmoid colon junction") AnnotationAssertion( "descending-sigmoid junction") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:8410016") AnnotationAssertion(rdfs:label "descending sigmoid junction") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (left colic vein) AnnotationAssertion(Annotation( ) Annotation( "WikipediaVersioned:Left_colic_vein&oldid=964575339") "A portal vein that drains the descending colon. It is a tributary of the inferior mesenteric vein, and follows the path of its corresponding artery, the left colic artery.") AnnotationAssertion( "http://orcid.org/0000-0002-2825-0621") AnnotationAssertion( "FMA:15394") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:8410017") AnnotationAssertion(rdfs:label "left colic vein") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (right colic vein) AnnotationAssertion(Annotation( ) Annotation( "WikipediaVersioned:Right_colic_vein&oldid=870898828") "A portal vein that drains the ascending colon. It is a tributary of the superior mesenteric vein, and travels with its corresponding artery, the right colic artery.") AnnotationAssertion( "http://orcid.org/0000-0002-2825-0621") AnnotationAssertion( "FMA:15407") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:8410018") AnnotationAssertion(rdfs:label "right colic vein") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (jejuno-ileal junction) AnnotationAssertion(Annotation( ) Annotation( ) Annotation( ) "The area where the jejunum ends and the ileum part of the intestine begins. Although there is no clear distinct section, the ileum is narrower and has smaller villi than the jejunum.") AnnotationAssertion( "http://orcid.org/0000-0002-2825-0621") AnnotationAssertion( "jejunoileal junction") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:8410019") AnnotationAssertion(rdfs:label "jejuno-ileal junction") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (venule of appendix) AnnotationAssertion(Annotation( ) "A venule located in the vermiform appendix.") AnnotationAssertion( "http://orcid.org/0000-0002-2825-0621") AnnotationAssertion( "venule of vermiform appendix") AnnotationAssertion( "vermiform appendix venule") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:8410020") AnnotationAssertion(rdfs:label "venule of appendix") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (inguinal region skin) AnnotationAssertion(Annotation( ) Annotation( ) Annotation( ) Annotation( "WikipediaVersioned:Groin&oldid=998393002") "The skin covering the inguinal region between the abdomen and the thigh on either side of the pubic bone.") AnnotationAssertion( "groin skin") AnnotationAssertion( "inguinal skin") AnnotationAssertion( "skin of groin") AnnotationAssertion( "skin of inguinal region") AnnotationAssertion( "zone of skin of groin") AnnotationAssertion( "zone of skin of inguinal region") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:8410021") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "inguinal region skin") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (left colic artery) AnnotationAssertion(Annotation( ) Annotation( ) "The first branch of the inferior mesenteric artery (IMA) is the left colic artery. The left colic artery supplies blood flow to the distal third of the transverse colon and the entirety of the descending colon. Once diverging from the IMA, the left colic artery runs anterior to the left ureter, left internal spermatic vessels (males), and psoas major before branching into its ascending and descending segments.") AnnotationAssertion( "http://orcid.org/0000-0002-2825-0621") AnnotationAssertion( "FMA:14826") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:8410022") AnnotationAssertion(rdfs:label "left colic artery") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (right colic artery) AnnotationAssertion(Annotation( ) Annotation( "ISBN:9780443103735") "The right colic artery may arise directly from the superior mesenteric artery (SMA) but often arises from a common trunk with the ileocolic artery or middle colic artery. It supplies the ascending colon.") AnnotationAssertion( "FMA:14811") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:8410023") AnnotationAssertion(rdfs:label "right colic artery") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (intestinal junction) AnnotationAssertion(Annotation( ) "An anatomical junction between two parts of the intestine.") AnnotationAssertion( "http://orcid.org/0000-0002-2825-0621") AnnotationAssertion( "junction of intestine") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:8410024") AnnotationAssertion(rdfs:label "intestinal junction") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (transition zone of prostate) AnnotationAssertion(Annotation( ) Annotation( ) "The region of the prostate gland anterior to the central and peripheral zones, surrounding the proximal urethra. It is the zone of the human prostate gland that grows the most throughout life, and is responsible for benign prostatic hypertrophy.") AnnotationAssertion(Annotation( ) "Homo sapiens") AnnotationAssertion( "http://orcid.org/0000-0002-2825-0621") AnnotationAssertion( "prostate transition zone") AnnotationAssertion( "transition zone of human prostate") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:8410025") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "transition zone of prostate") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (peripheral zone of prostate) AnnotationAssertion(Annotation( ) Annotation( ) "The region of the prostate that is located posterior to the central and transition zones, surrounding the distal urethra. It is the zone of origin for the vast majority of human prostatic cancers.") AnnotationAssertion(Annotation( ) "Homo sapiens") AnnotationAssertion( "http://orcid.org/0000-0002-2825-0621") AnnotationAssertion( "prostate peripheral zone") AnnotationAssertion( "peripheral zone of human prostate") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:8410026") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "peripheral zone of prostate") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (central zone of prostate) AnnotationAssertion(Annotation( ) Annotation( ) "The region of the prostate gland that is located between the peripheral and transition zones, surrounding the ejaculatory ducts. It gives rise to a very small percentage of human prostate cancers, often aggressive and invading the seminal vesicles.") AnnotationAssertion(Annotation( ) "Homo sapiens") AnnotationAssertion( "prostate central zone") AnnotationAssertion( "central zone of human prostate") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:8410027") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "central zone of prostate") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (arteriole of appendix) AnnotationAssertion(Annotation( ) "An arteriole located in the vermiform appendix.") AnnotationAssertion( "http://orcid.org/0000-0002-2825-0621") AnnotationAssertion( "appendix vermiformis arteriole") AnnotationAssertion( "arteriole of appendix vermiformis") AnnotationAssertion( "arteriole of vermiform appendix") AnnotationAssertion( "vermiform appendix arteriole") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:8410028") AnnotationAssertion(rdfs:label "arteriole of appendix") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lymphatic capillary of appendix) AnnotationAssertion(Annotation( ) "A lymphatic capillary that is located in the vermiform appendix.") AnnotationAssertion( "http://orcid.org/0000-0002-2825-0621") AnnotationAssertion( "lymphatic capillary of appendix vermiformis") AnnotationAssertion( "lymphatic capillary of vermiform appendix") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:8410029") AnnotationAssertion(rdfs:label "lymphatic capillary of appendix") SubClassOf( ) SubClassOf( ) # Class: (lymphatic vessel of appendix) AnnotationAssertion(Annotation( ) "A lymphatic vessel located in the vermiform appendix.") AnnotationAssertion( "http://orcid.org/0000-0002-2825-0621") AnnotationAssertion( "lymphatic vessel of appendix vermiformis") AnnotationAssertion( "lymphatic vessel of vermiform appendix") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:8410030") AnnotationAssertion(rdfs:label "lymphatic vessel of appendix") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (muscularis mucosae of appendix) AnnotationAssertion(Annotation( ) "A muscularis mucosa that is part of a vermiform appendix.") AnnotationAssertion( "http://orcid.org/0000-0002-2825-0621") AnnotationAssertion( "muscularis mucosae of appendix vermiformis") AnnotationAssertion( "muscularis mucosae of vermiform appendix") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:8410031") AnnotationAssertion(rdfs:label "muscularis mucosae of appendix") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (trabecular sinus of lymph node) AnnotationAssertion(Annotation( ) Annotation( ) Annotation( "WikipediaVersioned:Lymph_node&oldid=1020495758") "The trabecular sinus is the lymph-filled space outside the trabeculae between lobules of the lymph node. This is a continuation of the subcapsular sinus which receives the afferent vessels and is present beneath the capsule. This space is traversed by both reticular fibers and cells in the lymph.") AnnotationAssertion( "http://orcid.org/0000-0002-2825-0621") AnnotationAssertion( "lymph node trabecular sinus") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:8410032") AnnotationAssertion(rdfs:label "trabecular sinus of lymph node") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lymph node vein) AnnotationAssertion(Annotation( ) Annotation( ) Annotation( "WikipediaVersioned:Lymph_node&oldid=1001655735#Structure") "A vein where lymph node venules condense and which exits at the lymph node hilum. It is also called hilar vein.") AnnotationAssertion( "http://orcid.org/0000-0002-2825-0621") AnnotationAssertion( "hilar vein of lymph node") AnnotationAssertion( "vein of lymph node") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:8410033") AnnotationAssertion(rdfs:label "lymph node vein") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lymph node artery) AnnotationAssertion(Annotation( ) Annotation( ) Annotation( "WikipediaVersioned:Lymph_node&oldid=1001655735#Structure") "An artery that enters the lymph node at the hilum and branches into smaller arterioles.") AnnotationAssertion( "artery of lymph node") AnnotationAssertion( "hilar artery of lymph node") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:8410034") AnnotationAssertion(rdfs:label "lymph node artery") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (medullary arteriole of lymph node) AnnotationAssertion(Annotation( ) Annotation( ) "An arteriole that arises from the hilar artery of a lymph node and radiates centrifugally, branching in the medulla.") AnnotationAssertion( "http://orcid.org/0000-0002-2825-0621") AnnotationAssertion( "arteriole of medulla of lymph node") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:8410035") AnnotationAssertion(rdfs:label "medullary arteriole of lymph node") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (medullary venule of lymph node) AnnotationAssertion(Annotation( ) Annotation( ) "Medullary venules are a continuation of high endothelial venules which condense repeatedly in the interfollicular cortex and peripheral deep cortical unit and then transition to medullary venules at the corticomedullary junction. The medullary venules condense and return centripetally to the hilar vein.") AnnotationAssertion( "http://orcid.org/0000-0002-2825-0621") AnnotationAssertion( "venule of medulla of lymph node") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:8410036") AnnotationAssertion(rdfs:label "medullary venule of lymph node") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (high endothelial venule) AnnotationAssertion(Annotation( ) Annotation( ) "High endothelial venules are specialized blood vessels adapted for lymphocyte trafficking. They form a spatially organized network, which controls both the type of lymphocyte and the site of entry into lymphoid tissues. Uniquely, high endothelial venules express vascular addressins that regulate lymphocyte entry into lymphoid organs. They perform this function in all lymphoid organs except the spleen.") AnnotationAssertion( "http://orcid.org/0000-0002-2825-0621") AnnotationAssertion( "BTO:0004528") AnnotationAssertion( "NCIT:C32739") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:8410037") AnnotationAssertion(rdfs:label "high endothelial venule") SubClassOf( ) # Class: (high endothelial venule of lymph node) AnnotationAssertion(Annotation( ) Annotation( ) "A high endothelial venule that is part of a of lymph node.") AnnotationAssertion( "http://orcid.org/0000-0002-2825-0621") AnnotationAssertion( "lymph node high endothelial venule") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:8410038") AnnotationAssertion(rdfs:label "high endothelial venule of lymph node") SubClassOf( ) SubClassOf( ) # Class: (high endothelial venule of appendix) AnnotationAssertion(Annotation( ) Annotation( ) "A high endothelial venule that is located in the vermiform appendix.") AnnotationAssertion( "http://orcid.org/0000-0002-2825-0621") AnnotationAssertion( "appendix high endothelial venule") AnnotationAssertion( "high endothelial venule of appendix vermiformis") AnnotationAssertion( "high endothelial venule of vermiform appendix") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:8410039") AnnotationAssertion(rdfs:label "high endothelial venule of appendix") SubClassOf( ) SubClassOf( ) # Class: (high endothelial venule of small intestine Peyer's patch) AnnotationAssertion(Annotation( ) Annotation( ) Annotation( ) Annotation( ) "A high endothelial venule that is located in a Peyer's patch in the small intestine.") AnnotationAssertion( "http://orcid.org/0000-0002-2825-0621") AnnotationAssertion( "high endothelial venule of Peyer's patch") AnnotationAssertion( "high endothelial venule of Peyer's patch of small intestine") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:8410040") AnnotationAssertion(rdfs:label "high endothelial venule of small intestine Peyer's patch") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (venule of lymph node) AnnotationAssertion(Annotation( ) Annotation( ) "A venule that is part of a lymph node.") AnnotationAssertion( "http://orcid.org/0000-0002-2825-0621") AnnotationAssertion( "lymph node venule") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:8410041") AnnotationAssertion(rdfs:label "venule of lymph node") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (arteriole of lymph node) AnnotationAssertion(Annotation( ) Annotation( ) "An arteriole that is part of a lymph node.") AnnotationAssertion( "http://orcid.org/0000-0002-2825-0621") AnnotationAssertion( "lymph node arteriole") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:8410042") AnnotationAssertion(rdfs:label "arteriole of lymph node") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (bronchus submucosal gland) AnnotationAssertion(Annotation( ) Annotation( ) "A submucosal gland located in a bronchus.") AnnotationAssertion( "http://orcid.org/0000-0002-2825-0621") AnnotationAssertion( "airway submucosal gland") AnnotationAssertion( "EFO:0010666") AnnotationAssertion( "bronchial submucosal gland") AnnotationAssertion( "submucosal bronchial gland") AnnotationAssertion( "submucosal bronchus gland") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:8410043") AnnotationAssertion(rdfs:label "bronchus submucosal gland") SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (vein of appendix) AnnotationAssertion(Annotation( ) "A vein that is part of a vermiform appendix.") AnnotationAssertion( "http://orcid.org/0000-0002-2825-0621") AnnotationAssertion( "vein of appendix vermiformis") AnnotationAssertion( "vein of vermiform appendix") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:8410044") AnnotationAssertion(rdfs:label "vein of appendix") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (artery of appendix) AnnotationAssertion(Annotation( ) "An artery that is part of a vermiform appendix.") AnnotationAssertion( "http://orcid.org/0000-0002-2825-0621") AnnotationAssertion( "artery of appendix vermiformis") AnnotationAssertion( "artery of vermiform appendix") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:8410045") AnnotationAssertion(rdfs:label "artery of appendix") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (appendix smooth muscle circular layer) AnnotationAssertion(Annotation( ) "A circular muscle layer of muscular coat that is part of a vermiform appendix smooth muscle.") AnnotationAssertion( "http://orcid.org/0000-0002-2825-0621") AnnotationAssertion( "smooth muscle circular layer of appendix") AnnotationAssertion( "smooth muscle circular layer of appendix vermiformis") AnnotationAssertion( "smooth muscle circular layer of vermiform appendix") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:8410046") AnnotationAssertion(rdfs:label "appendix smooth muscle circular layer") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (appendix smooth muscle longitudinal layer) AnnotationAssertion(Annotation( ) "A longitudinal muscle layer of muscular coat that is part of a vermiform appendix smooth muscle.") AnnotationAssertion( "http://orcid.org/0000-0002-2825-0621") AnnotationAssertion( "smooth muscle longitudinal layer of appendix") AnnotationAssertion( "smooth muscle longitudinal layer of appendix vermiformis") AnnotationAssertion( "smooth muscle longitudinal layer of vermiform appendix") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:8410047") AnnotationAssertion(rdfs:label "appendix smooth muscle longitudinal layer") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (venule of colon) AnnotationAssertion(Annotation( ) Annotation( ) "A venule located in the colon.") AnnotationAssertion( "http://orcid.org/0000-0002-2825-0621") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:8410048") AnnotationAssertion(rdfs:label "venule of colon") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (serosal nerve fiber of appendix) AnnotationAssertion(Annotation( ) "A nerve fiber that is located in the serosa of vermiform appendix.") AnnotationAssertion( "http://orcid.org/0000-0002-2825-0621") AnnotationAssertion( "nerve fiber of serosa of appendix") AnnotationAssertion( "nerve fibre of serosa of appendix") AnnotationAssertion( "serosal nerve fiber of appendix vermiformis") AnnotationAssertion( "serosal nerve fiber of vermiform appendix") AnnotationAssertion( "serosal nerve fibre of appendix") AnnotationAssertion( "serosal nerve fibre of appendix vermiformis") AnnotationAssertion( "serosal nerve fibre of vermiform appendix") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:8410049") AnnotationAssertion(rdfs:label "serosal nerve fiber of appendix") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (anorectum) AnnotationAssertion(Annotation( ) Annotation( ) Annotation( ) Annotation( ) Annotation( ) "A subdivision of the digestive tract in humans that includes the rectum, the anal canal and the anus.") AnnotationAssertion( "The anatomy, pathology and medical community considers the anus to be part of the large intestine, and supports the use of 'anorectum' to include rectum, anal canal and anus. Although a few resources seem to only include the distal part of the rectum in 'anorectum', this UBERON grouping term is meant to refer more broadly to the whole of rectum.") AnnotationAssertion( "Homo sapiens") AnnotationAssertion( "anorectal") AnnotationAssertion( "http://orcid.org/0000-0002-2825-0621") AnnotationAssertion( "anorectal canal") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:8410050") AnnotationAssertion(rdfs:label "anorectum") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lymphatic vessel of colon) AnnotationAssertion(Annotation( ) Annotation( ) "A lymphatic vessel located in the colon.") AnnotationAssertion( "http://orcid.org/0000-0002-2825-0621") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:8410051") AnnotationAssertion(rdfs:label "lymphatic vessel of colon") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lymph node germinal center light zone) AnnotationAssertion(Annotation( ) Annotation( ) Annotation( ) "Lymph node germinal centers contain two microenvironments: the light zone and the dark zone. The light zone is sparsely populated with B cells and includes additional cell types such as follicular dendritic cells, lymph node tingible macrophages and T follicular helper cells.") AnnotationAssertion( "http://orcid.org/0000-0002-2825-0621") AnnotationAssertion( "germinal center light zone") AnnotationAssertion( "light zone of germinal center") AnnotationAssertion( "light zone of lymph node germinal center") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:8410052") AnnotationAssertion(rdfs:label "lymph node germinal center light zone") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lymph node germinal center dark zone) AnnotationAssertion(Annotation( ) Annotation( ) Annotation( ) "Lymph node germinal centers contain two microenvironments: the light zone and the dark zone. The dark zone is densely populated with B cell blasts and reticular cells.") AnnotationAssertion( "http://orcid.org/0000-0002-2825-0621") AnnotationAssertion( "dark zone of germinal center") AnnotationAssertion( "germinal center dark zone") AnnotationAssertion( "dark zone of lymph node germinal center") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:8410053") AnnotationAssertion(rdfs:label "lymph node germinal center dark zone") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lymphatic capillary of colon) AnnotationAssertion(Annotation( ) Annotation( ) "A lymphatic capillary located in the colon.") AnnotationAssertion( "http://orcid.org/0000-0002-2825-0621") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:8410054") AnnotationAssertion(rdfs:label "lymphatic capillary of colon") SubClassOf( ) SubClassOf( ) # Class: (lymphatic capillary of anorectum) AnnotationAssertion(Annotation( ) "A lymphatic capillary located in the anorectum.") AnnotationAssertion( "http://orcid.org/0000-0002-2825-0621") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:8410055") AnnotationAssertion(rdfs:label "lymphatic capillary of anorectum") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (capillary of anorectum) AnnotationAssertion(Annotation( ) "A capillary that is part of the anorectum.") AnnotationAssertion( "http://orcid.org/0000-0002-2825-0621") AnnotationAssertion( "blood vessel capillary of anorectum") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:8410056") AnnotationAssertion(rdfs:label "capillary of anorectum") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (capillary of colon) AnnotationAssertion(Annotation( ) "A capillary that is part of the colon.") AnnotationAssertion( "http://orcid.org/0000-0002-2825-0621") AnnotationAssertion( "blood vessel capillary of colon") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:8410057") AnnotationAssertion(rdfs:label "capillary of colon") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (myenteric nerve plexus of colon) AnnotationAssertion(Annotation( ) "Myenteric nerve plexus that is located in the colon.") AnnotationAssertion( "http://orcid.org/0000-0002-2825-0621") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:8410058") AnnotationAssertion(rdfs:label "myenteric nerve plexus of colon") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (submucous nerve plexus of colon) AnnotationAssertion(Annotation( ) "Submucous nerve plexus that is located in the colon.") AnnotationAssertion( "http://orcid.org/0000-0002-2825-0621") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:8410059") AnnotationAssertion(rdfs:label "submucous nerve plexus of colon") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (colon smooth muscle circular layer) AnnotationAssertion(Annotation( ) "A circular muscle layer of muscular coat that is part of a colon smooth muscle.") AnnotationAssertion( "http://orcid.org/0000-0002-2825-0621") AnnotationAssertion( "smooth muscle circular layer of colon") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:8410060") AnnotationAssertion(rdfs:label "colon smooth muscle circular layer") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (colon smooth muscle longitudinal layer) AnnotationAssertion(Annotation( ) "A longitudinal muscle layer of muscular coat that is part of a colon smooth muscle.") AnnotationAssertion( "http://orcid.org/0000-0002-2825-0621") AnnotationAssertion( "smooth muscle longitudinal layer of colon") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:8410061") AnnotationAssertion(rdfs:label "colon smooth muscle longitudinal layer") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (parasympathetic cholinergic nerve) AnnotationAssertion(Annotation( ) "A parasympathetic nerve that releases acetylcholine.") AnnotationAssertion( "Homo sapiens") AnnotationAssertion( "http://orcid.org/0000-0002-2825-0621") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:8410062") AnnotationAssertion(rdfs:label "parasympathetic cholinergic nerve") AnnotationAssertion(rdfs:seeAlso "https://github.com/obophenotype/uberon/issues/2104") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) # Class: (myenteric nerve plexus of small intestine) AnnotationAssertion(Annotation( ) "Myenteric nerve plexus that is part of the small intestine.") AnnotationAssertion( "http://orcid.org/0000-0002-2825-0621") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:8410063") AnnotationAssertion(rdfs:label "myenteric nerve plexus of small intestine") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (submucous nerve plexus of small intestine) AnnotationAssertion(Annotation( ) "Submucous nerve plexus that is located in the small intestine.") AnnotationAssertion( "http://orcid.org/0000-0002-2825-0621") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:8410064") AnnotationAssertion(rdfs:label "submucous nerve plexus of small intestine") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lymph node follicle marginal zone) AnnotationAssertion(Annotation( ) Annotation( ) Annotation( ) "Histologically, the marginal zone pattern of the lymph node is characterized by lymphoid follicles with three distinct layers. The inner layer is composed of follicular center zones, the middle layer of darkly stained mantle zones, and the outer layer of marginal zones. However, the marginal zone pattern is rarely seen in reactive lymph nodes except for mesenteric lymph nodes. Lymph node marginal zones are populated by marginal zone B cells which express CD19 and CD20 and have the phenotypic features of memory B cells.") AnnotationAssertion( "http://orcid.org/0000-0002-2825-0621") AnnotationAssertion( "lymph node marginal zone") AnnotationAssertion( "marginal zone of lymph node") AnnotationAssertion( "marginal zone of lymph node follicle") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:8410065") AnnotationAssertion(rdfs:label "lymph node follicle marginal zone") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lymph node paracortex) AnnotationAssertion(Annotation( ) Annotation( ) Annotation( ) "The lymph node paracortex is the middle layer of the lymph node and is mostly populated by T cells and dendritic cells. The paracortex also contains specialised blood vessels called high endothelial venules which allow lymphocytes to enter the node.") AnnotationAssertion( "http://orcid.org/0000-0002-2825-0621") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:8410066") AnnotationAssertion(rdfs:label "lymph node paracortex") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lymph node interfollicular cortex) AnnotationAssertion(Annotation( ) Annotation( ) Annotation( ) "Follicules in the lymph node are surrounded and separated by the interfollicular cortex. Together with the lymph node follicle, the interfollicular cortex of the lymph node lobule make up the superficial cortex of the lymph node. Capillaries empty into the high endothelial venules located in the interfollicular cortex. The interfollicular cortex also serves as transit corriders for lymphocytes migrating between the B and T cell areas.") AnnotationAssertion( "http://orcid.org/0000-0002-2825-0621") AnnotationAssertion( "interfollicular cortex of lymph node") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:8410067") AnnotationAssertion(rdfs:label "lymph node interfollicular cortex") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (hair of scalp) AnnotationAssertion(Annotation( ) "Hair that grows on the scalp.") AnnotationAssertion( "http://orcid.org/0000-0001-8314-2140") AnnotationAssertion(Annotation( ) "hair") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:8420000") AnnotationAssertion(rdfs:label "hair of scalp") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (cortical layer II/III) AnnotationAssertion(Annotation( ) "A laminar subdivision of the neocortex that is comprised of both layers II & III.") AnnotationAssertion( "cerebral cortex layer 2/3") AnnotationAssertion( "neocortex layer 2/3") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:8440000") AnnotationAssertion(rdfs:label "cortical layer II/III") SubClassOf( ) # Class: (cortical layer IV/V) AnnotationAssertion(Annotation( ) "A laminar subdivision of the neocortex that is comprised of both layers IV & V.") AnnotationAssertion( "cerebral cortex layer 4/5") AnnotationAssertion( "neocortex layer 4/5") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:8440001") AnnotationAssertion(rdfs:label "cortical layer IV/V") SubClassOf( ) # Class: (cortical layer V/VI) AnnotationAssertion(Annotation( ) "A laminar subdivision of the neocortex that is comprised of both layers V & VI.") AnnotationAssertion( "cerebral cortex layer 5/6") AnnotationAssertion( "neocortex layer 5/6") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:8440002") AnnotationAssertion(rdfs:label "cortical layer V/VI") SubClassOf( ) # Class: (cortical layer VIb) AnnotationAssertion(Annotation( ) "The deepest layer of the neocortex. While layer 6b is considered part of layer 6, it is distinct morphologically, genetically, and developmentally from the rest of layer 6. Neurons in L6b project to cortical targets and higher-order thalamus and develop from a precursor population that arises from the subplate.") AnnotationAssertion( "cerebral cortex layer 6b") AnnotationAssertion( "neocortex layer 6b") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:8440003") AnnotationAssertion(rdfs:label "cortical layer VIb") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (laminar subdivision of the cortex) AnnotationAssertion(Annotation( "ISBN-10:0-87893-742-0") "One or a subset of adjacent layers of the neocortex.") AnnotationAssertion( "uberon") AnnotationAssertion( "UBERON:8440004") AnnotationAssertion(rdfs:label "laminar subdivision of the cortex") SubClassOf( ) SubClassOf(Annotation( "female") Annotation( "dbpedia-modified") ObjectIntersectionOf( ObjectSomeValuesFrom( )) ObjectSomeValuesFrom( )) SubClassOf(Annotation( "male") Annotation( "dbpedia-modified") ObjectIntersectionOf( ObjectSomeValuesFrom( )) ObjectSomeValuesFrom( )) SubClassOf(ObjectIntersectionOf( ObjectSomeValuesFrom( )) ObjectSomeValuesFrom( )) SubClassOf(ObjectIntersectionOf( ObjectSomeValuesFrom( )) ObjectSomeValuesFrom( )) SubClassOf(ObjectIntersectionOf( ObjectSomeValuesFrom( )) ObjectSomeValuesFrom( )) DisjointClasses(ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( )) DisjointClasses(ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( )) DisjointClasses(ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( )) DisjointClasses(ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( )) DisjointClasses(ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( )) DisjointClasses(ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( )) DisjointClasses(ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( )) DisjointClasses(ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( )) DisjointClasses(ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( )) DisjointClasses(ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( )) DisjointClasses(ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( )) DisjointClasses(ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( )) DisjointClasses(ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( )) DisjointClasses(ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( )) DisjointClasses(ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( )) DisjointClasses(ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( )) DisjointClasses(ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( )) SubObjectPropertyOf(ObjectPropertyChain( ) ) SubObjectPropertyOf(ObjectPropertyChain( ) ) SubObjectPropertyOf(ObjectPropertyChain( ) ) SubObjectPropertyOf(ObjectPropertyChain( ) ) SubObjectPropertyOf(ObjectPropertyChain( ) ) SubObjectPropertyOf(ObjectPropertyChain( ) ) SubObjectPropertyOf(ObjectPropertyChain( ) ) SubObjectPropertyOf(ObjectPropertyChain( ) ) SubObjectPropertyOf(ObjectPropertyChain( ) ) SubObjectPropertyOf(ObjectPropertyChain( ) ) SubObjectPropertyOf(ObjectPropertyChain( ) ) SubObjectPropertyOf(ObjectPropertyChain( ) ) SubObjectPropertyOf(ObjectPropertyChain( ) ) SubObjectPropertyOf(ObjectPropertyChain( ) ) SubObjectPropertyOf(ObjectPropertyChain( ) ) SubObjectPropertyOf(ObjectPropertyChain( ) ) SubObjectPropertyOf(ObjectPropertyChain( ) ) SubObjectPropertyOf(ObjectPropertyChain( ) ) SubObjectPropertyOf(ObjectPropertyChain( ) ) SubObjectPropertyOf(ObjectPropertyChain( ) ) SubObjectPropertyOf(ObjectPropertyChain( ) ) SubObjectPropertyOf(ObjectPropertyChain( ) ) SubObjectPropertyOf(ObjectPropertyChain( ) ) SubObjectPropertyOf(ObjectPropertyChain( ) ) SubObjectPropertyOf(ObjectPropertyChain( ) ) SubObjectPropertyOf(ObjectPropertyChain( ) ) SubObjectPropertyOf(ObjectPropertyChain( ) ) SubObjectPropertyOf(ObjectPropertyChain( ) ) SubObjectPropertyOf(ObjectPropertyChain( ) ) SubObjectPropertyOf(ObjectPropertyChain( ) ) SubObjectPropertyOf(ObjectPropertyChain( ) ) SubObjectPropertyOf(ObjectPropertyChain( ) ) SubObjectPropertyOf(ObjectPropertyChain( ) ) SubObjectPropertyOf(ObjectPropertyChain( ) ) SubObjectPropertyOf(Annotation( "true") ObjectPropertyChain( ) ) SubObjectPropertyOf(ObjectPropertyChain( ) ) SubObjectPropertyOf(ObjectPropertyChain( ) ) SubObjectPropertyOf(ObjectPropertyChain( ) ) SubObjectPropertyOf(ObjectPropertyChain( ) ) SubObjectPropertyOf(ObjectPropertyChain( ) ) SubObjectPropertyOf(ObjectPropertyChain( ) ) SubObjectPropertyOf(ObjectPropertyChain( ) ) SubObjectPropertyOf(ObjectPropertyChain( ) ) SubObjectPropertyOf(ObjectPropertyChain( ) ) SubObjectPropertyOf(ObjectPropertyChain( ) ) SubObjectPropertyOf(ObjectPropertyChain( ) ) SubObjectPropertyOf(ObjectPropertyChain( ) ) SubObjectPropertyOf(ObjectPropertyChain( ) ) SubObjectPropertyOf(ObjectPropertyChain( ) ) SubObjectPropertyOf(ObjectPropertyChain( ) ) SubObjectPropertyOf(ObjectPropertyChain( ) ) SubObjectPropertyOf(ObjectPropertyChain( ) ) SubObjectPropertyOf(ObjectPropertyChain(ObjectInverseOf() ) ) DLSafeRule(Annotation(rdfs:comment "This can't be added as a property chain because it causes a circularity violation for 'part of'.") Body(ObjectPropertyAtom( Variable() Variable()) ObjectPropertyAtom( Variable() Variable()))Head(ObjectPropertyAtom( Variable() Variable()))) DLSafeRule(Annotation(rdfs:comment "This can't be added as a property chain because it causes a circularity violation for 'part of'.") Body(ObjectPropertyAtom( Variable() Variable()) ObjectPropertyAtom( Variable() Variable()))Head(ObjectPropertyAtom( Variable() Variable()))) DLSafeRule(Annotation(rdfs:comment "This can't be added as a property chain because it causes a circularity violation for 'part of'.") Body(ObjectPropertyAtom( Variable() Variable()) ObjectPropertyAtom( Variable() Variable()))Head(ObjectPropertyAtom( Variable() Variable()))) AnnotationAssertion( _:genid2147483785 "EFO:0000240") AnnotationAssertion( _:genid2147483786 "GO:0072166") AnnotationAssertion( _:genid2147483787 "FlyBase:FBrf0007733") AnnotationAssertion( _:genid2147483787 "FlyBase:FBrf0064792") AnnotationAssertion( _:genid2147483788 "FBC:DOS") AnnotationAssertion( _:genid2147483788 "FBC:VH") AnnotationAssertion( _:genid2147483789 "FBC:DOS") AnnotationAssertion( _:genid2147483789 "FBC:VH") AnnotationAssertion( _:genid2147483790 "ISBN:0073040584") AnnotationAssertion( _:genid2147483791 "FBC:DOS") AnnotationAssertion( _:genid2147483791 "FBC:VH") AnnotationAssertion( _:genid2147483792 "GO:0003224") AnnotationAssertion( _:genid2147483793 "MP:0009997") AnnotationAssertion( _:genid2147483794 "HP:0000606") AnnotationAssertion( _:genid2147483795 "BIRNLEX:1755") AnnotationAssertion( _:genid2147483796 "MP:0009994") AnnotationAssertion( _:genid2147483797 "GO:0072165") AnnotationAssertion( _:genid2147483798 "HP:0003832") AnnotationAssertion( _:genid2147483799 "PHENOSCAPE:alex") AnnotationAssertion( _:genid2147483800 "FBC:VH") AnnotationAssertion( _:genid2147483801 "GO:0021751") AnnotationAssertion( _:genid2147483802 "PHENOSCAPE:Wasila") AnnotationAssertion( _:genid2147483803 "ISBN:0073040584") AnnotationAssertion( _:genid2147483804 "GO:0003291") AnnotationAssertion( _:genid2147483805 "GO:0021728") AnnotationAssertion( _:genid2147483806 "MP:0009996") AnnotationAssertion( _:genid2147483807 "GO:0021729") AnnotationAssertion( _:genid2147483808 "FlyBase:FBrf0006943") AnnotationAssertion( _:genid2147483809 "PHENOSCAPE:alex") AnnotationAssertion( _:genid2147483810 "FBC:VH") AnnotationAssertion( _:genid2147483811 "FBC:DOS") AnnotationAssertion( _:genid2147483812 "GO:0003227") AnnotationAssertion( _:genid2147483813 "HP:0005289") AnnotationAssertion( _:genid2147483814 "GO:0061249") AnnotationAssertion( _:genid2147483815 "FBC:DOS") AnnotationAssertion( _:genid2147483816 "HP:0000864") AnnotationAssertion( _:genid2147483817 "FlyBase:FBrf0002482") AnnotationAssertion( _:genid2147483817 "FlyBase:FBrf0007196") AnnotationAssertion( _:genid2147483817 "FlyBase:FBrf0007735") AnnotationAssertion( _:genid2147483817 "FlyBase:FBrf0034076") AnnotationAssertion( _:genid2147483818 "ISBN:0073040584") AnnotationAssertion( _:genid2147483819 "BIRNLEX:1732") AnnotationAssertion( _:genid2147483820 "GO:0003285") AnnotationAssertion( _:genid2147483821 "FBC:VH") AnnotationAssertion( _:genid2147483822 "GO:0060682") AnnotationAssertion( _:genid2147483823 "ISBN:0073040584") AnnotationAssertion( _:genid2147483824 "GO:dph") AnnotationAssertion( _:genid2147483824 "ZFIN:cvs") AnnotationAssertion( _:genid2147483825 "MP:0009988") AnnotationAssertion( _:genid2147483826 "MP:0009993") AnnotationAssertion( _:genid2147483827 "GO:0021729") AnnotationAssertion( _:genid2147483827 "GO_REF:0000021") AnnotationAssertion( _:genid2147483828 "GO:0072003") AnnotationAssertion( _:genid2147483829 "BIRNLEX:1734") AnnotationAssertion( _:genid2147483830 "HP:0003350") AnnotationAssertion( _:genid2147483831 "UBERON:CL_meeting_20110725") AnnotationAssertion( _:genid2147483832 "FBC:VH") AnnotationAssertion( _:genid2147483833 "FBC:DOS") AnnotationAssertion( _:genid2147483834 "MP:0009946") AnnotationAssertion( _:genid2147483835 "FBC:VH") AnnotationAssertion( _:genid2147483836 "MP:0009989") AnnotationAssertion( _:genid2147483837 "MP:0010003") AnnotationAssertion( _:genid2147483838 "MP:0010002") AnnotationAssertion( _:genid2147483839 "FlyBase:FBrf0089570") AnnotationAssertion( _:genid2147483840 "GO:0003226") AnnotationAssertion( _:genid2147483841 "GO:0003225") AnnotationAssertion( _:genid2147483842 "MP:0009990") AnnotationAssertion( _:genid2147483843 "GO:0061214") AnnotationAssertion( _:genid2147483844 "PMCID:PMC2093943") AnnotationAssertion( _:genid2147483845 "FBC:DOS") AnnotationAssertion( _:genid2147483846 "MP:0009999") AnnotationAssertion( _:genid2147483847 "MP:0009364") )